BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010740
(502 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255556562|ref|XP_002519315.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541630|gb|EEF43179.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 491
Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/471 (73%), Positives = 394/471 (83%), Gaps = 14/471 (2%)
Query: 21 LPHPHDTKTNKHRAQVPNFNLIHCSVTSTNKHTSFSSESAVAAKKRLWKEGEYPGVSETS 80
L ++ K R+ P L+ C+ T + + KK+ WK+GE+PG +ETS
Sbjct: 21 LAQSNNNCNTKPRSHQPKHTLVLCAYAPT----------STSPKKKHWKQGEFPGFTETS 70
Query: 81 IPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFY 140
P +RTPIKN+KKKL+RK KAKAWVNTV E SD +LKKQWFQAL+VFEMLKEQPFY
Sbjct: 71 PP----RRTPIKNIKKKLDRKNKAKAWVNTVTEALSDRILKKQWFQALEVFEMLKEQPFY 126
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
PKEGTYMKLLVLLG++GQP+ A ++F+EMVEEGIEPT ELYTALLAAYCRN L DEAF
Sbjct: 127 HPKEGTYMKLLVLLGRTGQPQRAHQLFDEMVEEGIEPTAELYTALLAAYCRNHLTDEAFS 186
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L QMKTLP C PDVYTYSTL+KACVDA RFEL+E LYQ+M ER +TPNTVTQNIVL GY
Sbjct: 187 ILQQMKTLPRCLPDVYTYSTLLKACVDASRFELVEALYQEMGERLITPNTVTQNIVLSGY 246
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
GKAGM+DQMERVLSGMLES CKPDVWTMN ILSVF NKGQ+D+ME+WYEKFR+FGI+PE
Sbjct: 247 GKAGMYDQMERVLSGMLESTECKPDVWTMNIILSVFGNKGQIDLMEKWYEKFRSFGIEPE 306
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
TRTFNILIGAYGKKRMYDKMSSVME+MRKLQFPWT+STYNNVIEAF+ GD KHMEYTF+
Sbjct: 307 TRTFNILIGAYGKKRMYDKMSSVMEFMRKLQFPWTTSTYNNVIEAFAVAGDVKHMEYTFD 366
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
QM AEGMKADTKTFCCLINGYANAGLFHKVISSV+LA+K +I EN +FYNA+ISAC KA+
Sbjct: 367 QMRAEGMKADTKTFCCLINGYANAGLFHKVISSVQLATKFEIPENTTFYNAIISACAKAE 426
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQML 491
DLMEMERV+KRMK+ C+PDS T+SIM EAY +EGMNDKVY LEQEK M+
Sbjct: 427 DLMEMERVFKRMKDNQCQPDSTTYSIMVEAYKREGMNDKVYYLEQEKQGMV 477
>gi|224112076|ref|XP_002316075.1| predicted protein [Populus trichocarpa]
gi|222865115|gb|EEF02246.1| predicted protein [Populus trichocarpa]
Length = 434
Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/433 (78%), Positives = 386/433 (89%), Gaps = 4/433 (0%)
Query: 59 SAVAAKKRLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDH 118
S+ KK+ WK+GE+PG ++ S R +RT IKN+KKKL+RK+KAKAWVNTVAE +D
Sbjct: 6 SSTFPKKKHWKQGEFPGFTDAS----RPRRTAIKNIKKKLDRKSKAKAWVNTVAEALTDC 61
Query: 119 VLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPT 178
VLKKQW QA+QVFEMLKEQPFYQPKE TYMKLLVLLG+ GQP+ A ++F+EMVEEGIEPT
Sbjct: 62 VLKKQWLQAIQVFEMLKEQPFYQPKEATYMKLLVLLGRCGQPQRAHQLFDEMVEEGIEPT 121
Query: 179 PELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
ELYTALLAAYCRN+LIDE F +NQMK+LP CQPDVYTYSTL+KACVDA RFELI+TLY
Sbjct: 122 TELYTALLAAYCRNNLIDEGFSIINQMKSLPRCQPDVYTYSTLLKACVDASRFELIDTLY 181
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
Q+MDER ++PNTVTQN+VL GYG+ GM+DQMERVLS MLESA CKPDVWTMN ILSVF N
Sbjct: 182 QEMDERLISPNTVTQNVVLSGYGRVGMYDQMERVLSEMLESAACKPDVWTMNIILSVFGN 241
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
+GQ+D+MERWYEKFRNFGI+PETRTFNILIGAYGKKRMYDKMSSVMEYMRK+QFPWT+ST
Sbjct: 242 EGQIDLMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKVQFPWTTST 301
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YNNVIEAF+D+GDAK+MEY F+QM AE MKADTKTFCCLINGYANAGLFHKVISSV+LA+
Sbjct: 302 YNNVIEAFADVGDAKNMEYAFDQMRAESMKADTKTFCCLINGYANAGLFHKVISSVQLAA 361
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
K +I EN SF+NAVISAC KADDLMEMERV+KRMK+K C PDS T+SIM EAY KEGMND
Sbjct: 362 KFEIPENTSFFNAVISACAKADDLMEMERVFKRMKDKQCPPDSRTYSIMVEAYRKEGMND 421
Query: 479 KVYALEQEKLQML 491
K+Y LEQEK +M+
Sbjct: 422 KIYYLEQEKQEMI 434
>gi|225432159|ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic [Vitis vinifera]
Length = 498
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/432 (78%), Positives = 387/432 (89%), Gaps = 4/432 (0%)
Query: 63 AKKRLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKK 122
KKRLWK+GE+PG TS G RS++TPIKN+KKKL+RK AKAW NTVAE SD VLKK
Sbjct: 67 GKKRLWKQGEFPG---TSAEG-RSRKTPIKNIKKKLDRKNDAKAWANTVAEALSDLVLKK 122
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
QW QAL+VFEML+EQPFYQPKEGTYMKLLVLLGKSGQP A ++F+ MVEEG EPT ELY
Sbjct: 123 QWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDTMVEEGCEPTTELY 182
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
TALLA+YCR++LIDEAF LNQMKTLP CQPDV+TYSTL+KACVDA RFEL+E+LY++MD
Sbjct: 183 TALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFELVESLYEEMD 242
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
RS+TPNTVTQNIVL GYGKAG FD+ME+VLSGMLES + KPDVWTMNTILS+F NKGQ+
Sbjct: 243 VRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQI 302
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
++ME+WYEKFRNFGI+PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT+STYNNV
Sbjct: 303 EIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNV 362
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
IEAFSD+GDAK+MEYTF+QM AEGMKADTKTFCCLI GYANAGLFHKV+SSV+LA K +I
Sbjct: 363 IEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKVVSSVQLAGKFEI 422
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
EN SFYNAVISAC KA+DL+EMERV+ RMK+KHC+PDS T+SIM EAY KEGMNDK+Y
Sbjct: 423 PENTSFYNAVISACAKAEDLIEMERVFNRMKDKHCQPDSTTYSIMVEAYKKEGMNDKIYD 482
Query: 483 LEQEKLQMLLEA 494
LEQE+ +M+ +
Sbjct: 483 LEQERQRMVADG 494
>gi|147820978|emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]
Length = 525
Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/430 (78%), Positives = 386/430 (89%), Gaps = 4/430 (0%)
Query: 62 AAKKRLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLK 121
KKRLWK+GE+PG TS G RS++TPIKN+KKKL+RK AKAW NTVAE SD VLK
Sbjct: 66 VGKKRLWKQGEFPG---TSAEG-RSRKTPIKNIKKKLDRKNDAKAWANTVAEALSDLVLK 121
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
KQW QAL+VFEML+EQPFYQPKEGTYMKLLVLLGKSGQP A ++F+ MVEEG EPT EL
Sbjct: 122 KQWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDTMVEEGCEPTTEL 181
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
YTALLA+YCR++LIDEAF LNQMKTLP CQPDV+TYSTL+KACVDA RFEL+E+LY++M
Sbjct: 182 YTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFELVESLYEEM 241
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
D RS+TPNTVTQNIVL GYGKAG FD+ME+VLSGMLES + KPDVWTMNTILS+F NKGQ
Sbjct: 242 DVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQ 301
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+++ME+WYEKFRNFGI+PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT+STYNN
Sbjct: 302 IEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNN 361
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
VIEAFSD+GDAK+MEYTF+QM AEGMKADTKTFCCLI GYANAGLFHKV+SSV+LA K +
Sbjct: 362 VIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKVVSSVQLAGKFE 421
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
I EN SFYNAVISAC KA+DL+EMERV+ RMK+KHC+PDS T+SIM EAY KEGMNDK+Y
Sbjct: 422 IPENTSFYNAVISACAKAEDLIEMERVFNRMKDKHCQPDSTTYSIMVEAYKKEGMNDKIY 481
Query: 482 ALEQEKLQML 491
LEQE+ +M+
Sbjct: 482 DLEQERQRMM 491
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 147/323 (45%), Gaps = 7/323 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A + +K P QP TY LL + + EL ++ EM I P +
Sbjct: 197 EAFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFELVESLYEEMDVRSITPNTVTQNIV 256
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L+ Y + DE L+ M + +PDV+T +T++ + + E++E Y+
Sbjct: 257 LSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNFG 316
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM---NTILSVFANKGQV 302
+ P T T NI++G YGK M+D+M V+ M + WT N ++ F++ G
Sbjct: 317 IEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF----PWTTSTYNNVIEAFSDVGDA 372
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
ME +++ R G+ +T+TF LI Y ++ K+ S ++ K + P +S YN V
Sbjct: 373 KNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKVVSSVQLAGKFEIPENTSFYNAV 432
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I A + D ME F +M + + D+ T+ ++ Y G+ K+ + ++
Sbjct: 433 ISACAKAEDLIEMERVFNRMKDKHCQPDSTTYSIMVEAYKKEGMNDKIYDLEQERQRMMC 492
Query: 423 AENVSFYNAVISACIKADDLMEM 445
+ ++S + C+ + ++
Sbjct: 493 SYHLSICMICMKYCLDPPGICDL 515
>gi|449441652|ref|XP_004138596.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Cucumis sativus]
gi|449522692|ref|XP_004168360.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Cucumis sativus]
Length = 496
Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/461 (72%), Positives = 392/461 (85%), Gaps = 4/461 (0%)
Query: 37 PNFNLIHCSVTSTNKHTSFSSESAVAAKKRLWKEGEYPGVSETSIPGYRSKRTPIKNLKK 96
PN ++ C+ + + + S S+ AKKR WK+GE+PG +ETS +R P+K +KK
Sbjct: 39 PNSRIVRCAFAAPTRKSPVPSTSSSPAKKRHWKQGEFPGTTETST----RRRAPLKRVKK 94
Query: 97 KLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGK 156
KL+RK AKAW NTV E SDH+ K+W QAL+VFEML+EQPFY+PKEGTYMKLLVLLG+
Sbjct: 95 KLDRKNNAKAWANTVTEALSDHITNKRWLQALEVFEMLREQPFYEPKEGTYMKLLVLLGR 154
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
SGQP AR +F+ MV+E EPTPELYTALLAAYCRN+LID+AF TLN MKTLP CQPDVY
Sbjct: 155 SGQPHRARLLFDTMVQERCEPTPELYTALLAAYCRNNLIDDAFSTLNLMKTLPRCQPDVY 214
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
TYS LIKACVD RFE++E+LY++M ER +TPNTVTQNIVL GYGK G +DQME+VL GM
Sbjct: 215 TYSILIKACVDDSRFEIVESLYEEMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGM 274
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
LES TC+PDVWTMN ILSVF NKG ++MMERWYEKFRNFGI+PETRTFNILIGAYGKKRM
Sbjct: 275 LESTTCRPDVWTMNIILSVFGNKGHIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRM 334
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
YDKMSSVMEYMRKLQFPWT+STYNNVIEAF+D+GDAK+MEYTFEQM AEGM+ADTKTFCC
Sbjct: 335 YDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCC 394
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
LINGYANAGLFHKVI SV+LA KL+I EN SFYNAVISAC KA+DLMEM+RV+KRMK+KH
Sbjct: 395 LINGYANAGLFHKVIGSVKLAGKLEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKH 454
Query: 457 CRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
C+PD++T+SIM EAY KEGMND+V+ LE EK Q++ AS +
Sbjct: 455 CQPDNKTYSIMMEAYGKEGMNDRVHYLELEKKQVIDNASNN 495
>gi|356565453|ref|XP_003550954.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Glycine max]
Length = 488
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/488 (70%), Positives = 399/488 (81%), Gaps = 14/488 (2%)
Query: 6 ASASLSFSSSLLPSPLPHPHDTKTNKHRAQVPNFNLIHCSVTSTNKHTSFSSESAVAAKK 65
AS SLSF S ++PS +PH KT+ H P F LI + SA A KK
Sbjct: 2 ASMSLSFCSCIVPSRIPHDKSNKTHSHHQ--PTFPLIRFGI------------SAPAVKK 47
Query: 66 RLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWF 125
R WK+GE+P S+ S P ++TP+KNLKKK ++K AKAWVNTV E+ S+ + K W
Sbjct: 48 RHWKKGEFPATSQPSFPNDTRRKTPLKNLKKKFDKKNDAKAWVNTVTESLSERIHNKHWL 107
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QALQVF+ML+EQ FYQPKEGTYMKL+VLLGKSGQP A ++F M+EEG+EPTPELYTAL
Sbjct: 108 QALQVFDMLREQTFYQPKEGTYMKLIVLLGKSGQPHRAHQLFTTMIEEGLEPTPELYTAL 167
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
LAAYCR+++IDEAF LN+MK LP CQPDV+TYSTLIK CVDA +F+L+E LY++M ERS
Sbjct: 168 LAAYCRSNMIDEAFSVLNEMKKLPRCQPDVFTYSTLIKVCVDAFKFDLVELLYEEMAERS 227
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ PNTVTQNIVLGGYGKAGMFDQME+VLS ML S TCKPDVWTMNTI+SVF N GQ+DMM
Sbjct: 228 IMPNTVTQNIVLGGYGKAGMFDQMEKVLSSMLLSTTCKPDVWTMNTIISVFGNMGQIDMM 287
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E+WYEKFR FGI+PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT+STYNNVIEA
Sbjct: 288 EKWYEKFRYFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEA 347
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
F+D GDAKHME TF+QM AEGMKADTKT CCLINGYANAGLFHKVISSVRLA KL+I EN
Sbjct: 348 FADAGDAKHMECTFDQMRAEGMKADTKTLCCLINGYANAGLFHKVISSVRLAGKLEIPEN 407
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
++FYNAV+SAC KA+DLMEMERV+KRMK+ C+PD T++IM EAY KEGMNDK+Y LEQ
Sbjct: 408 ITFYNAVLSACAKAEDLMEMERVFKRMKDSQCQPDDTTYTIMIEAYRKEGMNDKIYYLEQ 467
Query: 486 EKLQMLLE 493
EK M+ +
Sbjct: 468 EKQTMMTD 475
>gi|356564951|ref|XP_003550709.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Glycine max]
Length = 488
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/488 (70%), Positives = 400/488 (81%), Gaps = 14/488 (2%)
Query: 6 ASASLSFSSSLLPSPLPHPHDTKTNKHRAQVPNFNLIHCSVTSTNKHTSFSSESAVAAKK 65
AS SLSF SS++PS +PH KT+ H P F LI + SA A KK
Sbjct: 2 ASISLSFCSSIVPSRIPHDKSNKTHSHHN--PTFPLIRFGI------------SAPAVKK 47
Query: 66 RLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWF 125
R WK+GE+P S+ S P ++TP+KNLKKK ++K AKAWVNTV E+ S+ + K W
Sbjct: 48 RHWKKGEFPATSQPSFPNDTRRKTPLKNLKKKFDKKNDAKAWVNTVTESLSERIHNKHWL 107
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QALQVF+ML+EQ FYQPKEGT MKL+VLLGKSGQP A ++F M+EEG+EPTPELYTAL
Sbjct: 108 QALQVFDMLREQTFYQPKEGTCMKLIVLLGKSGQPHRAHQLFTTMIEEGLEPTPELYTAL 167
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
LAAYCR+++IDEAF LN+MK LP CQPDV+TYSTLIK CVDA +F+L++ LY++M ERS
Sbjct: 168 LAAYCRSNMIDEAFSVLNEMKKLPLCQPDVFTYSTLIKVCVDAFKFDLVQLLYEEMAERS 227
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+TPNTVTQNIVLGGYGKAGMFDQME+VLS ML+S TCKPDVWTMNTI+SVF N GQ+DM
Sbjct: 228 ITPNTVTQNIVLGGYGKAGMFDQMEKVLSSMLQSTTCKPDVWTMNTIISVFGNMGQIDMT 287
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E+WYEKFR FGI+PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT+STYNNVIEA
Sbjct: 288 EKWYEKFRYFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEA 347
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
F+D GDAKHME TF+QM AEGMKADTKT CCLINGYANAGLFHKVISSVRLA KL+I EN
Sbjct: 348 FADAGDAKHMECTFDQMRAEGMKADTKTLCCLINGYANAGLFHKVISSVRLAGKLEIPEN 407
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
++FYNAV+SAC KA+DLMEMERV+KRMK+ C+PD T++IM EAY KEGMNDK+Y LEQ
Sbjct: 408 ITFYNAVLSACAKAEDLMEMERVFKRMKDSQCQPDDTTYTIMIEAYRKEGMNDKIYYLEQ 467
Query: 486 EKLQMLLE 493
EK M+ +
Sbjct: 468 EKQTMMTD 475
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE-NVSFYNAVISACI 437
F M EG++ + + L+ Y + + + S + KL + + +V Y+ +I C+
Sbjct: 149 FTTMIEEGLEPTPELYTALLAAYCRSNMIDEAFSVLNEMKKLPLCQPDVFTYSTLIKVCV 208
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
A ++ +Y+ M E+ P++ T +I+ Y K GM D++ + LQ
Sbjct: 209 DAFKFDLVQLLYEEMAERSITPNTVTQNIVLGGYGKAGMFDQMEKVLSSMLQSTTCKPDV 268
Query: 498 WQQN 501
W N
Sbjct: 269 WTMN 272
>gi|15230719|ref|NP_187294.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207273|sp|Q9SQU6.1|PP216_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g06430, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2750; Flags: Precursor
gi|6437546|gb|AAF08573.1|AC011623_6 unknown protein [Arabidopsis thaliana]
gi|20466300|gb|AAM20467.1| unknown protein [Arabidopsis thaliana]
gi|30387593|gb|AAP31962.1| At3g06430 [Arabidopsis thaliana]
gi|332640870|gb|AEE74391.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 486
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/468 (68%), Positives = 388/468 (82%), Gaps = 14/468 (2%)
Query: 24 PHDTKTNKHRAQVPNFNLIHCSVTSTNKHTSFSSESAVAAKKRLWKEGEYPGVSETSIPG 83
P + +HR + ++ C + ++ S KKRLWK+GE+PG++E
Sbjct: 18 PEGKRRFRHR----DVGIVRCVLAASK------SSPGSVTKKRLWKDGEFPGITEP---- 63
Query: 84 YRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPK 143
+RTPIKN+KKKL+R++KA WVNTV ET SD + KKQW QAL+VF+ML+EQ FYQPK
Sbjct: 64 VNQRRTPIKNVKKKLDRRSKANGWVNTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPK 123
Query: 144 EGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLN 203
EGTYMKLLVLLGKSGQP A+K+F+EM+EEG+EPT ELYTALLAAY R++LID+AF L+
Sbjct: 124 EGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILD 183
Query: 204 QMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKA 263
+MK+ P CQPDV+TYSTL+KACVDA +F+L+++LY++MDER +TPNTVTQNIVL GYG+
Sbjct: 184 KMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRV 243
Query: 264 GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
G FDQME+VLS ML S CKPDVWTMN ILSVF N G++DMME WYEKFRNFGI+PETRT
Sbjct: 244 GRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRT 303
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
FNILIG+YGKKRMYDKMSSVMEYMRKL+FPWT+STYNN+IEAF+D+GDAK+ME TF+QM
Sbjct: 304 FNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMR 363
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
+EGMKADTKTFCCLINGYANAGLFHKVISSV+LA+K +I EN +FYNAVISAC KADDL+
Sbjct: 364 SEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLI 423
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQML 491
EMERVY RMKE+ C DS TF IM EAY KEGMNDK+Y LEQE+ +++
Sbjct: 424 EMERVYIRMKERQCVCDSRTFEIMVEAYEKEGMNDKIYYLEQERQKLM 471
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 64/147 (43%), Gaps = 1/147 (0%)
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV-R 415
TY ++ G + F++M EG++ + + L+ Y + L S + +
Sbjct: 125 GTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDK 184
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ S Q +V Y+ ++ AC+ A ++ +YK M E+ P++ T +I+ Y + G
Sbjct: 185 MKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVG 244
Query: 476 MNDKVYALEQEKLQMLLEASGHWQQNI 502
D++ + + L W NI
Sbjct: 245 RFDQMEKVLSDMLVSTACKPDVWTMNI 271
>gi|297833394|ref|XP_002884579.1| EMB2750 [Arabidopsis lyrata subsp. lyrata]
gi|297330419|gb|EFH60838.1| EMB2750 [Arabidopsis lyrata subsp. lyrata]
Length = 486
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/471 (68%), Positives = 388/471 (82%), Gaps = 14/471 (2%)
Query: 24 PHDTKTNKHRAQVPNFNLIHCSVTSTNKHTSFSSESAVAAKKRLWKEGEYPGVSETSIPG 83
P + +HR + + + C + ++ S KKRLWK+GE+PG++E P
Sbjct: 18 PEGKRRFRHR----DASFVRCVLAASK------SSPGSVTKKRLWKDGEFPGITEPVNP- 66
Query: 84 YRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPK 143
+RTPIKN+KKKL+R++KA W NTV ET SD + KKQW QAL+VF+ML+EQ FYQPK
Sbjct: 67 ---RRTPIKNVKKKLDRRSKANGWANTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPK 123
Query: 144 EGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLN 203
EGTYMKLLVLLGKSGQP A+K+F+EM+EEG+EPT ELYTALLAAY R++LID+AF L+
Sbjct: 124 EGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILD 183
Query: 204 QMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKA 263
MK LP CQPDV+TYSTL+KACVDA +F+L+++LY++MDER +TPNTVTQNIVL GYG+
Sbjct: 184 TMKGLPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRV 243
Query: 264 GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
G FDQME+VLS ML S CKPDVWTMN ILSVF N G++DMME WYEKFRNFGI+PETRT
Sbjct: 244 GRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRT 303
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
FNILIG+YGKKRMYDKMSSVMEYMRKL+FPWT+STYNN+IEAF+D+GDAK+ME TF+QM
Sbjct: 304 FNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMR 363
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
+EGMKADTKTFCCLINGYANAGLFHKVISSV+LA+K +I EN +FYNAVI+AC KADDL+
Sbjct: 364 SEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVIAACAKADDLI 423
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEA 494
EMERVY RMKE+ C DS TF IM EAY KEGMNDK+Y LEQE+ +++ A
Sbjct: 424 EMERVYTRMKERQCVCDSRTFEIMVEAYEKEGMNDKIYYLEQERQKLMDRA 474
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 1/147 (0%)
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
TY ++ G + F++M EG++ + + L+ Y + L S +
Sbjct: 125 GTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDT 184
Query: 417 ASKL-QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
L Q +V Y+ ++ AC+ A ++ +YK M E+ P++ T +I+ Y + G
Sbjct: 185 MKGLPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVG 244
Query: 476 MNDKVYALEQEKLQMLLEASGHWQQNI 502
D++ + + L W NI
Sbjct: 245 RFDQMEKVLSDMLVSTACKPDVWTMNI 271
>gi|357479161|ref|XP_003609866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510921|gb|AES92063.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/471 (68%), Positives = 390/471 (82%), Gaps = 6/471 (1%)
Query: 23 HPHDTKTNKHRAQVPNFNLIHCSVTSTNKHTSFSSESAVAAKKRLWKEGEYPGVSETSIP 82
H T N + +P I +V+S+ T+ +S S+V KK+ WK+GE+PGVSETS+P
Sbjct: 23 HNKTTHNNPRKPHLP----IFYAVSSSPSKTASASNSSVV-KKKHWKQGEFPGVSETSLP 77
Query: 83 GYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQP 142
++R PIKN+KKKL+RK AKAW NTV E S+ + KKQW QAL+ +ML+EQ FYQP
Sbjct: 78 S-STRRKPIKNVKKKLDRKNNAKAWANTVTEALSECIDKKQWLQALETLDMLREQSFYQP 136
Query: 143 KEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTL 202
+EGTYMKL+VLLGKSGQP+ A ++F M+EEG +PTPELYTALLAAYCR+++IDEA L
Sbjct: 137 REGTYMKLIVLLGKSGQPQRAHQLFTAMIEEGCDPTPELYTALLAAYCRSNMIDEALSIL 196
Query: 203 NQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGK 262
++MK P CQPDV+TYSTLIKACVD +FELIE LY++M +RS+ PNTVTQNIVL GYGK
Sbjct: 197 DEMKNHPLCQPDVFTYSTLIKACVDIFKFELIELLYEEMAQRSIMPNTVTQNIVLNGYGK 256
Query: 263 AGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETR 322
AGMFDQME+VLSGML+SA CKPDVWTMNTI+ VF N GQ+DMME+WYEKFRNFGI+PETR
Sbjct: 257 AGMFDQMEKVLSGMLQSADCKPDVWTMNTIIGVFGNMGQIDMMEKWYEKFRNFGIEPETR 316
Query: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
TFNILIG+YGKKRMYDKMSSVMEYMRKLQFPWT+STYNNVIEAF++ GDAK+MEYTF QM
Sbjct: 317 TFNILIGSYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFAEAGDAKNMEYTFNQM 376
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
+EGM+ADTKTFCCLI G+ANAGLFHKVISSV+LA+KL+I N +FYNAV+SAC KA+DL
Sbjct: 377 RSEGMRADTKTFCCLIKGFANAGLFHKVISSVQLAAKLEIPLNTAFYNAVLSACAKAEDL 436
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
MEM+RV+ RMK+ C D T+SIM EAY KEGMNDK+Y LEQEK M+ +
Sbjct: 437 MEMDRVFMRMKDTQCPLDDTTYSIMVEAYRKEGMNDKIYYLEQEKQTMITD 487
>gi|297736801|emb|CBI26002.3| unnamed protein product [Vitis vinifera]
Length = 469
Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/434 (73%), Positives = 363/434 (83%), Gaps = 33/434 (7%)
Query: 61 VAAKKRLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVL 120
KKRLWK+GE+PG TS G RS++TPIKN+KKKL+RK AKAW NTVAE SD VL
Sbjct: 65 AVGKKRLWKQGEFPG---TSAEG-RSRKTPIKNIKKKLDRKNDAKAWANTVAEALSDLVL 120
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
KKQW QAL+VFEML+EQPFYQPKEGTYMKLLVLLGKSGQP A ++F+ MVEEG EPT E
Sbjct: 121 KKQWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDTMVEEGCEPTTE 180
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
LYTALLA+YCR++LIDEAF LNQMKTLP CQPDV+TYSTL+KACVDA RFEL+E+LY++
Sbjct: 181 LYTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFELVESLYEE 240
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
MD RS+TPNTVTQNIVL GYGKAG FD+ME+VLSGMLES + KPDVWTMNTILS+F NKG
Sbjct: 241 MDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKG 300
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
Q+++ME+WYEKFRNFGI+PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT+STYN
Sbjct: 301 QIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYN 360
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
NVIEAFSD+GDAK+MEYTF+QM AEGMKADTKTFCCLI GYANAGLFH
Sbjct: 361 NVIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFH------------ 408
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
KA+DL+EMERV+ RMK+KHC+PDS T+SIM EAY KEGMNDK+
Sbjct: 409 -----------------KAEDLIEMERVFNRMKDKHCQPDSTTYSIMVEAYKKEGMNDKI 451
Query: 481 YALEQEKLQMLLEA 494
Y LEQE+ +M+ +
Sbjct: 452 YDLEQERQRMVADG 465
>gi|224099036|ref|XP_002311357.1| predicted protein [Populus trichocarpa]
gi|222851177|gb|EEE88724.1| predicted protein [Populus trichocarpa]
Length = 369
Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust.
Identities = 291/362 (80%), Positives = 327/362 (90%)
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
+FEMLKEQPFYQPKE TYMKLLVLLG+ GQP+ A ++F+EM+EEGIEPT E YTALLAAY
Sbjct: 1 MFEMLKEQPFYQPKEATYMKLLVLLGRCGQPQRAHQIFDEMIEEGIEPTSEFYTALLAAY 60
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
CRN+LI+E F +NQMKT+P CQPDVYTYSTL+KACVDA RFELI+ LYQ+MDER ++PN
Sbjct: 61 CRNNLIEEGFSIINQMKTVPRCQPDVYTYSTLLKACVDASRFELIDILYQEMDERLISPN 120
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
TVTQNIVL G+GK GM+DQMERVLSGMLES TCKPDVWTMN ILSVF NKG VD+MERWY
Sbjct: 121 TVTQNIVLSGFGKVGMYDQMERVLSGMLESKTCKPDVWTMNIILSVFGNKGHVDLMERWY 180
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
EKFRNFGI+PETRTFNILIGAYGKKRMYD MSSVMEYMRKLQFPWT+STYNNVIEAF+D+
Sbjct: 181 EKFRNFGIEPETRTFNILIGAYGKKRMYDNMSSVMEYMRKLQFPWTTSTYNNVIEAFADV 240
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFY 429
GDAK+MEYTF+QM AE MKADTKTFCCLINGYANAGLFHKVISSV+LA+K +I EN S Y
Sbjct: 241 GDAKNMEYTFDQMRAEDMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTSLY 300
Query: 430 NAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
AVISAC KADDL+EMERV+K+MK+K C PDS T+SIM EAY KEGMNDK+Y LEQEK +
Sbjct: 301 KAVISACAKADDLVEMERVFKQMKDKQCLPDSRTYSIMVEAYRKEGMNDKIYYLEQEKQK 360
Query: 490 ML 491
M+
Sbjct: 361 MI 362
>gi|242047208|ref|XP_002461350.1| hypothetical protein SORBIDRAFT_02g001400 [Sorghum bicolor]
gi|241924727|gb|EER97871.1| hypothetical protein SORBIDRAFT_02g001400 [Sorghum bicolor]
Length = 560
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 283/427 (66%), Positives = 349/427 (81%), Gaps = 2/427 (0%)
Query: 60 AVAAKKRLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHV 119
A+ KR WK GE+PG++ PG + RTP+KN+KK+L+ +A+AKAW TV E +D V
Sbjct: 124 ALPQGKRHWKAGEFPGIA--VAPGSGTPRTPLKNVKKRLDARAEAKAWACTVTEALADRV 181
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
K W +ALQVFEMLKEQPFY PKEGT+MKL+VLLG+SGQP A ++F+EM+++G +PTP
Sbjct: 182 TSKNWQEALQVFEMLKEQPFYHPKEGTFMKLIVLLGRSGQPARAHQLFDEMLQQGCQPTP 241
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
LYTAL+ AYCR+ L+D+A LN MK P CQPDVYTYST+IKACVDA RF+LI+ +Y+
Sbjct: 242 GLYTALIGAYCRSGLLDDALQLLNDMKGSPLCQPDVYTYSTIIKACVDATRFDLIDVMYK 301
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
DM ERS+ PNTVTQNIVL GYGKAG D ME+VLS ML+S CKPDVWTMN ILS+F NK
Sbjct: 302 DMAERSIAPNTVTQNIVLSGYGKAGRLDDMEKVLSDMLDSTACKPDVWTMNIILSLFGNK 361
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
GQV++ME+WYEKFR++GI+PETRT NILIGAYGKKRMYDKMS+VMEYMRKL FPWT++TY
Sbjct: 362 GQVELMEKWYEKFRSYGIEPETRTLNILIGAYGKKRMYDKMSAVMEYMRKLAFPWTTATY 421
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
NNVIEAF++ GDAK+ME+TF QM +EGMK DTKTFCCLING++ AG FHKV+ V+LA +
Sbjct: 422 NNVIEAFAEAGDAKNMEHTFNQMRSEGMKPDTKTFCCLINGFSKAGQFHKVVGMVKLAER 481
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
L + N SF+NA++ AC +ADDLMEMERV++ MK C PD+ T+SI+ EAY KEGM DK
Sbjct: 482 LDVPANTSFHNAILGACARADDLMEMERVFRHMKHTQCDPDAVTYSILVEAYRKEGMTDK 541
Query: 480 VYALEQE 486
+YAL QE
Sbjct: 542 IYALHQE 548
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 59/147 (40%), Gaps = 1/147 (0%)
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
T+ +I G F++M +G + + LI Y +GL + +
Sbjct: 207 GTFMKLIVLLGRSGQPARAHQLFDEMLQQGCQPTPGLYTALIGAYCRSGLLDDALQLLND 266
Query: 417 ASKLQIAE-NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + +V Y+ +I AC+ A ++ +YK M E+ P++ T +I+ Y K G
Sbjct: 267 MKGSPLCQPDVYTYSTIIKACVDATRFDLIDVMYKDMAERSIAPNTVTQNIVLSGYGKAG 326
Query: 476 MNDKVYALEQEKLQMLLEASGHWQQNI 502
D + + + L W NI
Sbjct: 327 RLDDMEKVLSDMLDSTACKPDVWTMNI 353
>gi|195616496|gb|ACG30078.1| PPR2 [Zea mays]
Length = 580
Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust.
Identities = 277/422 (65%), Positives = 346/422 (81%), Gaps = 2/422 (0%)
Query: 65 KRLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQW 124
KR WK GE+PG + + PG + RTP+KN+KK+L+ +A AKAW TV E +D V K W
Sbjct: 149 KRHWKAGEFPGAA--AAPGSGTPRTPLKNVKKRLDARADAKAWACTVTEALADRVSSKNW 206
Query: 125 FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+ALQVFEMLKEQPFY PKEGTYMKL+VLLG+SGQP A ++F+EM+++G +PTPELYTA
Sbjct: 207 QEALQVFEMLKEQPFYHPKEGTYMKLIVLLGRSGQPTRAHQLFDEMLQQGCQPTPELYTA 266
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ AYCR+ L+DEA LN MK+ P CQPDVYTYST+IKACVDA RF+L + +Y+DM ER
Sbjct: 267 LIGAYCRSGLLDEALQLLNDMKSSPLCQPDVYTYSTIIKACVDAARFDLTDAMYKDMAER 326
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
S++PNTVTQNIVL GYGKAG D MERVLS ML+S +CKPDVWTMN ILS+F N+G+V++
Sbjct: 327 SISPNTVTQNIVLSGYGKAGRLDDMERVLSDMLDSVSCKPDVWTMNIILSLFGNRGEVEL 386
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
MERWYEKFR +G++PETRT NILIGAYGK+RMYDKMS+VME+MRKL FPWT++TYNNVIE
Sbjct: 387 MERWYEKFRGYGVEPETRTLNILIGAYGKRRMYDKMSAVMEHMRKLAFPWTTATYNNVIE 446
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
AF++ GDA +ME+ F QM +EGM+ DTKTFCCLI+G++ AG FHKV+ V+LA +L +
Sbjct: 447 AFAEAGDAGNMEHAFNQMRSEGMRPDTKTFCCLIDGFSRAGQFHKVVGMVKLAERLDVPA 506
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
N F+NAV+ AC +ADDL+EMERV++RMK C PD+ T+SI+ EAY KEGM DK+YAL
Sbjct: 507 NTPFHNAVLGACARADDLVEMERVFRRMKHTQCEPDASTYSILVEAYRKEGMTDKIYALH 566
Query: 485 QE 486
QE
Sbjct: 567 QE 568
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 1/147 (0%)
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR- 415
TY +I G F++M +G + + + LI Y +GL + + +
Sbjct: 227 GTYMKLIVLLGRSGQPTRAHQLFDEMLQQGCQPTPELYTALIGAYCRSGLLDEALQLLND 286
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ S +V Y+ +I AC+ A + +YK M E+ P++ T +I+ Y K G
Sbjct: 287 MKSSPLCQPDVYTYSTIIKACVDAARFDLTDAMYKDMAERSISPNTVTQNIVLSGYGKAG 346
Query: 476 MNDKVYALEQEKLQMLLEASGHWQQNI 502
D + + + L + W NI
Sbjct: 347 RLDDMERVLSDMLDSVSCKPDVWTMNI 373
>gi|226500056|ref|NP_001147821.1| pentatricopeptide repeat 2 [Zea mays]
gi|195613946|gb|ACG28803.1| PPR2 [Zea mays]
Length = 562
Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust.
Identities = 278/422 (65%), Positives = 347/422 (82%), Gaps = 2/422 (0%)
Query: 65 KRLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQW 124
KR WK GE+PG + + PG + RTP+KN+KK+L+ +A AKAW TV E +D V K W
Sbjct: 131 KRHWKAGEFPGAA--AAPGSGTPRTPLKNVKKRLDARADAKAWACTVTEALADRVSSKNW 188
Query: 125 FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+ALQVFEMLKEQPFY PKEGTYMKL+VLLG+SGQP A ++F+EM+++G +PTPELYTA
Sbjct: 189 QEALQVFEMLKEQPFYHPKEGTYMKLIVLLGRSGQPTRAHQLFDEMLQQGCQPTPELYTA 248
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ AYCR+ L+DEA LN MK+ P CQPDVYTYST+IKACVDA RF+L +T+Y+DM ER
Sbjct: 249 LIGAYCRSCLLDEALQLLNDMKSSPLCQPDVYTYSTIIKACVDAARFDLTDTMYKDMAER 308
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
S++PNTVTQNIVL GYGKAG D MERVLS ML+S +CKPDVWTMN ILS+F N+G+V++
Sbjct: 309 SISPNTVTQNIVLSGYGKAGRLDDMERVLSDMLDSVSCKPDVWTMNIILSLFGNRGEVEL 368
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
MERWYEKFR +G++PETRT NILIGAYGK+RMYDKMS+VME+MRKL FPWT++TYNNVIE
Sbjct: 369 MERWYEKFRGYGVEPETRTLNILIGAYGKRRMYDKMSAVMEHMRKLAFPWTTATYNNVIE 428
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
AF++ GDA +ME+ F QM +EGM+ DTKTFCCLI+G++ AG FHKV+ V+LA +L +
Sbjct: 429 AFAEAGDAGNMEHAFNQMRSEGMRPDTKTFCCLIDGFSRAGQFHKVVGMVKLAERLDVPV 488
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
N F+NAV+ AC +ADDL+EMERV++RMK C PD+ T+SI+ EAY KEGM DK+YAL
Sbjct: 489 NTPFHNAVLGACARADDLVEMERVFRRMKHTQCEPDASTYSILVEAYRKEGMTDKIYALH 548
Query: 485 QE 486
QE
Sbjct: 549 QE 550
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 60/147 (40%), Gaps = 1/147 (0%)
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR- 415
TY +I G F++M +G + + + LI Y + L + + +
Sbjct: 209 GTYMKLIVLLGRSGQPTRAHQLFDEMLQQGCQPTPELYTALIGAYCRSCLLDEALQLLND 268
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ S +V Y+ +I AC+ A + +YK M E+ P++ T +I+ Y K G
Sbjct: 269 MKSSPLCQPDVYTYSTIIKACVDAARFDLTDTMYKDMAERSISPNTVTQNIVLSGYGKAG 328
Query: 476 MNDKVYALEQEKLQMLLEASGHWQQNI 502
D + + + L + W NI
Sbjct: 329 RLDDMERVLSDMLDSVSCKPDVWTMNI 355
>gi|293330977|ref|NP_001169349.1| uncharacterized protein LOC100383216 [Zea mays]
gi|30961817|gb|AAP37977.1| PPR2 [Zea mays]
gi|224028857|gb|ACN33504.1| unknown [Zea mays]
gi|414883415|tpg|DAA59429.1| TPA: pentatricopeptide repeat 2 [Zea mays]
Length = 571
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 276/422 (65%), Positives = 346/422 (81%), Gaps = 2/422 (0%)
Query: 65 KRLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQW 124
KR WK GE+PG + + PG + RTP+KN+KK+L+ +A AKAW TV E +D V K W
Sbjct: 140 KRHWKAGEFPGAA--AAPGSGTPRTPLKNVKKRLDARADAKAWACTVTEALADRVSSKNW 197
Query: 125 FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+ALQVFEMLKEQPFY PKEGTYMKL+VLLG+SGQP A ++F+EM+++G +PTPELYTA
Sbjct: 198 QEALQVFEMLKEQPFYHPKEGTYMKLIVLLGRSGQPTRAHQLFDEMLQQGCQPTPELYTA 257
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ AYCR+ L+DEA LN MK+ P CQPDVYTYST+IKAC+DA RF+L + +Y+DM ER
Sbjct: 258 LIGAYCRSGLLDEALQLLNDMKSSPLCQPDVYTYSTIIKACIDAARFDLTDAMYKDMAER 317
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
S++PNTVTQNIVL GYGKAG D MERVLS ML+S +CKPDVWTMN ILS+F N+G+V++
Sbjct: 318 SISPNTVTQNIVLSGYGKAGRLDDMERVLSDMLDSVSCKPDVWTMNIILSLFGNRGEVEL 377
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
MERWYEKFR +G++PETRT NILIGAYGK+RMYDKMS+VME+MRKL FPWT++TYNNVIE
Sbjct: 378 MERWYEKFRGYGVEPETRTLNILIGAYGKRRMYDKMSAVMEHMRKLAFPWTTATYNNVIE 437
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
AF++ GDA +ME+ F QM +EGM+ DTKTFCCLI+G++ AG FHKV+ V+LA +L +
Sbjct: 438 AFAEAGDAGNMEHAFNQMRSEGMRPDTKTFCCLIDGFSRAGQFHKVVGMVKLAERLDVPV 497
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
N F+NAV+ AC +ADDL+EMERV++RMK C PD+ T+SI+ EAY KEGM DK+YAL
Sbjct: 498 NTPFHNAVLGACARADDLVEMERVFRRMKHTQCEPDASTYSILVEAYRKEGMTDKIYALH 557
Query: 485 QE 486
QE
Sbjct: 558 QE 559
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 1/147 (0%)
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR- 415
TY +I G F++M +G + + + LI Y +GL + + +
Sbjct: 218 GTYMKLIVLLGRSGQPTRAHQLFDEMLQQGCQPTPELYTALIGAYCRSGLLDEALQLLND 277
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ S +V Y+ +I ACI A + +YK M E+ P++ T +I+ Y K G
Sbjct: 278 MKSSPLCQPDVYTYSTIIKACIDAARFDLTDAMYKDMAERSISPNTVTQNIVLSGYGKAG 337
Query: 476 MNDKVYALEQEKLQMLLEASGHWQQNI 502
D + + + L + W NI
Sbjct: 338 RLDDMERVLSDMLDSVSCKPDVWTMNI 364
>gi|218192673|gb|EEC75100.1| hypothetical protein OsI_11265 [Oryza sativa Indica Group]
Length = 588
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 280/431 (64%), Positives = 351/431 (81%), Gaps = 3/431 (0%)
Query: 56 SSESAVAAKKRLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETF 115
+S+ +R WK GE+PG E S R +R+PIKN+KK+L+ +A+AKAW TV E
Sbjct: 62 DGDSSRRTGRRHWKAGEFPGTQEDS---RRPRRSPIKNVKKRLDARAEAKAWACTVTEAL 118
Query: 116 SDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
+D + K W +ALQVF+MLKEQPFY PKEGT+MKLL+LLG+SGQP AR +F+EM+++G
Sbjct: 119 ADRIDAKNWQEALQVFQMLKEQPFYHPKEGTFMKLLLLLGRSGQPSRARYLFDEMLQQGC 178
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
+PTPELYTAL+AAYCRN L+D+AF L MK P CQPDVYTYST+IKACVDA RF++++
Sbjct: 179 QPTPELYTALIAAYCRNGLLDDAFRLLADMKASPVCQPDVYTYSTIIKACVDASRFDIVD 238
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
+Y+DM +RS+ PNTVTQNIVL GYG+AG D ME+VLS ML+S T KPDVWTMN ILS+
Sbjct: 239 AMYKDMADRSIAPNTVTQNIVLSGYGRAGRLDDMEKVLSAMLDSTTSKPDVWTMNIILSL 298
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
F N+GQ++ ME+WYEKFR +GI+PETRT NILIGAYGKKRMYDKMS+VMEYMRKL FPWT
Sbjct: 299 FGNRGQIESMEKWYEKFRGYGIEPETRTLNILIGAYGKKRMYDKMSAVMEYMRKLAFPWT 358
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
++T+NNVIEAF+D GDAK+ME+TF QM AEGMK DTKTFCCLING+ NAGLFHKV+ V+
Sbjct: 359 TATFNNVIEAFADAGDAKNMEHTFNQMRAEGMKPDTKTFCCLINGFGNAGLFHKVVGMVK 418
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
LA +L + + +F+NAV+ AC+KA+DLMEMERV+ RMK+ C PD+ T+SI+ AY KEG
Sbjct: 419 LAERLGVPMDTTFHNAVLMACVKAEDLMEMERVFMRMKQIQCVPDATTYSILVGAYRKEG 478
Query: 476 MNDKVYALEQE 486
M DK+Y L+QE
Sbjct: 479 MTDKIYVLQQE 489
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 62/150 (41%), Gaps = 7/150 (4%)
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
T+ ++ G Y F++M +G + + + LI Y GL + RL
Sbjct: 148 GTFMKLLLLLGRSGQPSRARYLFDEMLQQGCQPTPELYTALIAAYCRNGLLD---DAFRL 204
Query: 417 ASKLQIAE----NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
+ ++ + +V Y+ +I AC+ A ++ +YK M ++ P++ T +I+ Y
Sbjct: 205 LADMKASPVCQPDVYTYSTIIKACVDASRFDIVDAMYKDMADRSIAPNTVTQNIVLSGYG 264
Query: 473 KEGMNDKVYALEQEKLQMLLEASGHWQQNI 502
+ G D + + L W NI
Sbjct: 265 RAGRLDDMEKVLSAMLDSTTSKPDVWTMNI 294
>gi|115452625|ref|NP_001049913.1| Os03g0309800 [Oryza sativa Japonica Group]
gi|108707769|gb|ABF95564.1| PPR2, putative, expressed [Oryza sativa Japonica Group]
gi|108707770|gb|ABF95565.1| PPR2, putative, expressed [Oryza sativa Japonica Group]
gi|108707771|gb|ABF95566.1| PPR2, putative, expressed [Oryza sativa Japonica Group]
gi|113548384|dbj|BAF11827.1| Os03g0309800 [Oryza sativa Japonica Group]
gi|125586018|gb|EAZ26682.1| hypothetical protein OsJ_10586 [Oryza sativa Japonica Group]
gi|215686360|dbj|BAG87621.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215741099|dbj|BAG97594.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767065|dbj|BAG99293.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767110|dbj|BAG99338.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 501
Score = 627 bits (1616), Expect = e-177, Method: Compositional matrix adjust.
Identities = 279/431 (64%), Positives = 350/431 (81%), Gaps = 3/431 (0%)
Query: 56 SSESAVAAKKRLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETF 115
+S+ +R WK GE+PG E S R +R+PIKN+KK+L+ +A+AKAW TV E
Sbjct: 62 DGDSSRRTGRRHWKAGEFPGTQEDS---RRPRRSPIKNVKKRLDARAEAKAWACTVTEAL 118
Query: 116 SDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
+D + K W +ALQVF+MLKEQPFY PKEGT+MKLL+LLG+SGQP AR +F+EM+++G
Sbjct: 119 ADRIDAKNWQEALQVFQMLKEQPFYHPKEGTFMKLLLLLGRSGQPSRARYLFDEMLQQGC 178
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
+PTPELYTAL+AAYCRN L+D+AF L MK P CQPDVYTYST+IKACVDA RF++++
Sbjct: 179 QPTPELYTALIAAYCRNGLLDDAFRLLADMKASPVCQPDVYTYSTIIKACVDASRFDIVD 238
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
+Y+DM +RS+ PNTVTQNIVL GYG+AG D ME+VLS ML+S T KPDVWTMN ILS+
Sbjct: 239 AMYKDMADRSIAPNTVTQNIVLSGYGRAGRLDDMEKVLSAMLDSTTSKPDVWTMNIILSL 298
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
F N+GQ++ ME+WYEKFR +GI+PETRT NILIGAYGKKRMYDKMS+VMEYMRKL FPWT
Sbjct: 299 FGNRGQIESMEKWYEKFRGYGIEPETRTLNILIGAYGKKRMYDKMSAVMEYMRKLAFPWT 358
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
++T+NNVIEAF+D GDAK+ME+TF QM AEGMK DTKTFCCLING+ NAGLFHKV+ V+
Sbjct: 359 TATFNNVIEAFADAGDAKNMEHTFNQMRAEGMKPDTKTFCCLINGFGNAGLFHKVVGMVK 418
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
LA +L + + +F+NAV+ C+KA+DLMEMERV+ RMK+ C PD+ T+SI+ AY KEG
Sbjct: 419 LAERLGVPMDTTFHNAVLMTCVKAEDLMEMERVFMRMKQIQCIPDATTYSILVGAYRKEG 478
Query: 476 MNDKVYALEQE 486
M DK+Y L+QE
Sbjct: 479 MTDKIYVLQQE 489
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 62/150 (41%), Gaps = 7/150 (4%)
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
T+ ++ G Y F++M +G + + + LI Y GL + RL
Sbjct: 148 GTFMKLLLLLGRSGQPSRARYLFDEMLQQGCQPTPELYTALIAAYCRNGLLD---DAFRL 204
Query: 417 ASKLQIAE----NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
+ ++ + +V Y+ +I AC+ A ++ +YK M ++ P++ T +I+ Y
Sbjct: 205 LADMKASPVCQPDVYTYSTIIKACVDASRFDIVDAMYKDMADRSIAPNTVTQNIVLSGYG 264
Query: 473 KEGMNDKVYALEQEKLQMLLEASGHWQQNI 502
+ G D + + L W NI
Sbjct: 265 RAGRLDDMEKVLSAMLDSTTSKPDVWTMNI 294
>gi|326495232|dbj|BAJ85712.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 527
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 282/438 (64%), Positives = 346/438 (78%), Gaps = 2/438 (0%)
Query: 51 KHTSFSSESAVAAKKRLWKEGEYPGVSET-SIPGYRSK-RTPIKNLKKKLERKAKAKAWV 108
+H + ++R WK GE+P E+ S G R + RTPIKN++K+L+ +A AKAW
Sbjct: 78 RHWKAGEDPEGRGRQRHWKAGEFPAAGESQSQSGRRGRARTPIKNVQKRLDARADAKAWA 137
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
TV E +D + K W ALQVFEMLKEQPFY PKEGTYMKLL+LLG+SGQP LA+ +F
Sbjct: 138 CTVTEALADRIAAKNWQGALQVFEMLKEQPFYYPKEGTYMKLLLLLGRSGQPSLAQDLFT 197
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
EM ++G +PTPELYTAL+ AYCRN L+DEA L MK P CQPDVYTYS LIKA VDA
Sbjct: 198 EMQQQGCQPTPELYTALIGAYCRNGLLDEALKLLQDMKANPLCQPDVYTYSILIKAFVDA 257
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
RF+L++ +Y++M ERSV PNTVTQNIVL GY +AG D ME++LS MLESA KPDVWT
Sbjct: 258 PRFDLVDAMYKEMAERSVAPNTVTQNIVLSGYCRAGRLDDMEKLLSAMLESANSKPDVWT 317
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
MN ILS+F N GQV++ME+WYEKFR +GI+PETRTFNILIGAYGKKRMYDKMS+VMEYMR
Sbjct: 318 MNIILSLFGNSGQVELMEKWYEKFRGYGIEPETRTFNILIGAYGKKRMYDKMSAVMEYMR 377
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
+L FPWT++TYNNVIEAF++ GDAK+ME TF QM +EGMK DTKTFCCLING++NA LFH
Sbjct: 378 RLAFPWTTATYNNVIEAFAEAGDAKNMEDTFNQMRSEGMKPDTKTFCCLINGFSNAALFH 437
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
KV+ V+LA +L + N SF+N+V++AC KA+DLMEMERV++ MK C PD+ T+SI+
Sbjct: 438 KVVGMVKLAERLDVPPNTSFHNSVLAACAKAEDLMEMERVFRHMKHMQCEPDAITYSILL 497
Query: 469 EAYAKEGMNDKVYALEQE 486
EAY KEGM DK+YAL+QE
Sbjct: 498 EAYRKEGMTDKMYALQQE 515
>gi|357157771|ref|XP_003577908.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Brachypodium distachyon]
Length = 512
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 271/422 (64%), Positives = 333/422 (78%), Gaps = 2/422 (0%)
Query: 65 KRLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQW 124
+R WK GE+P RTPIKN++K+ + ++ AKAW TV E SD + K W
Sbjct: 81 QRHWKAGEFPESQSGGS--RSRSRTPIKNIRKRQDARSDAKAWAPTVTEALSDRIAAKNW 138
Query: 125 FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+ALQVFEMLKEQPFY PKEGTYMKLL+LLG+SGQP LA ++F +M ++G +PTPELYTA
Sbjct: 139 PEALQVFEMLKEQPFYYPKEGTYMKLLLLLGRSGQPALAHRLFADMQQQGCQPTPELYTA 198
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+AAYCR+ L+D+A L MK P CQPDVYTYSTLIKA VDA RF+L++ +Y++M ER
Sbjct: 199 LIAAYCRSGLLDDALRLLGDMKAAPLCQPDVYTYSTLIKALVDASRFDLVDAMYKEMAER 258
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
V PNTVTQNIVL GYG+AG D ME++LS ML+S KPDVWTMN ILS+F N GQVD+
Sbjct: 259 GVAPNTVTQNIVLSGYGRAGRMDDMEKLLSAMLDSTASKPDVWTMNIILSLFGNSGQVDL 318
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
ME+WYEKFR +GI+PETRT NILIGAYGKKRMYDKMS+VME+MRKL FPWT+STYNNVIE
Sbjct: 319 MEKWYEKFRGYGIEPETRTLNILIGAYGKKRMYDKMSAVMEFMRKLAFPWTTSTYNNVIE 378
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
AF++ GD K+ME TF QM +EGMK DTKTFCCLING++ AGLFHKV+ V+LA +L +
Sbjct: 379 AFAEAGDEKNMEQTFNQMRSEGMKPDTKTFCCLINGFSKAGLFHKVVGMVKLAERLDVPA 438
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
N SF+N+V++AC +A DL+EMERV++ MK C PD+ T+SI+ EAY KEGM DKVY L+
Sbjct: 439 NTSFHNSVLAACARAGDLVEMERVFRHMKHVQCAPDATTYSILVEAYRKEGMTDKVYDLQ 498
Query: 485 QE 486
QE
Sbjct: 499 QE 500
>gi|108707772|gb|ABF95567.1| PPR2, putative, expressed [Oryza sativa Japonica Group]
Length = 443
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 247/358 (68%), Positives = 304/358 (84%)
Query: 129 QVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAA 188
QVF+MLKEQPFY PKEGT+MKLL+LLG+SGQP AR +F+EM+++G +PTPELYTAL+AA
Sbjct: 74 QVFQMLKEQPFYHPKEGTFMKLLLLLGRSGQPSRARYLFDEMLQQGCQPTPELYTALIAA 133
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP 248
YCRN L+D+AF L MK P CQPDVYTYST+IKACVDA RF++++ +Y+DM +RS+ P
Sbjct: 134 YCRNGLLDDAFRLLADMKASPVCQPDVYTYSTIIKACVDASRFDIVDAMYKDMADRSIAP 193
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW 308
NTVTQNIVL GYG+AG D ME+VLS ML+S T KPDVWTMN ILS+F N+GQ++ ME+W
Sbjct: 194 NTVTQNIVLSGYGRAGRLDDMEKVLSAMLDSTTSKPDVWTMNIILSLFGNRGQIESMEKW 253
Query: 309 YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD 368
YEKFR +GI+PETRT NILIGAYGKKRMYDKMS+VMEYMRKL FPWT++T+NNVIEAF+D
Sbjct: 254 YEKFRGYGIEPETRTLNILIGAYGKKRMYDKMSAVMEYMRKLAFPWTTATFNNVIEAFAD 313
Query: 369 MGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSF 428
GDAK+ME+TF QM AEGMK DTKTFCCLING+ NAGLFHKV+ V+LA +L + + +F
Sbjct: 314 AGDAKNMEHTFNQMRAEGMKPDTKTFCCLINGFGNAGLFHKVVGMVKLAERLGVPMDTTF 373
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+NAV+ C+KA+DLMEMERV+ RMK+ C PD+ T+SI+ AY KEGM DK+Y L+QE
Sbjct: 374 HNAVLMTCVKAEDLMEMERVFMRMKQIQCIPDATTYSILVGAYRKEGMTDKIYVLQQE 431
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 130/287 (45%), Gaps = 7/287 (2%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A ++ +K P QP TY ++ + + ++ ++ +M + I P +L
Sbjct: 143 AFRLLADMKASPVCQPDVYTYSTIIKACVDASRFDIVDAMYKDMADRSIAPNTVTQNIVL 202
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+ Y R +D+ L+ M +PDV+T + ++ + + E +E Y+ +
Sbjct: 203 SGYGRAGRLDDMEKVLSAMLDSTTSKPDVWTMNIILSLFGNRGQIESMEKWYEKFRGYGI 262
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW---TMNTILSVFANKGQVD 303
P T T NI++G YGK M+D+M V+ M + A W T N ++ FA+ G
Sbjct: 263 EPETRTLNILIGAYGKKRMYDKMSAVMEYMRKLAF----PWTTATFNNVIEAFADAGDAK 318
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
ME + + R G+ P+T+TF LI +G ++ K+ +++ +L P ++ +N V+
Sbjct: 319 NMEHTFNQMRAEGMKPDTKTFCCLINGFGNAGLFHKVVGMVKLAERLGVPMDTTFHNAVL 378
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
D ME F +M D T+ L+ Y G+ K+
Sbjct: 379 MTCVKAEDLMEMERVFMRMKQIQCIPDATTYSILVGAYRKEGMTDKI 425
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 62/150 (41%), Gaps = 7/150 (4%)
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
T+ ++ G Y F++M +G + + + LI Y GL + RL
Sbjct: 90 GTFMKLLLLLGRSGQPSRARYLFDEMLQQGCQPTPELYTALIAAYCRNGLLD---DAFRL 146
Query: 417 ASKLQIAE----NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
+ ++ + +V Y+ +I AC+ A ++ +YK M ++ P++ T +I+ Y
Sbjct: 147 LADMKASPVCQPDVYTYSTIIKACVDASRFDIVDAMYKDMADRSIAPNTVTQNIVLSGYG 206
Query: 473 KEGMNDKVYALEQEKLQMLLEASGHWQQNI 502
+ G D + + L W NI
Sbjct: 207 RAGRLDDMEKVLSAMLDSTTSKPDVWTMNI 236
>gi|356532886|ref|XP_003535000.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Glycine max]
Length = 485
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 281/487 (57%), Positives = 362/487 (74%), Gaps = 15/487 (3%)
Query: 6 ASASLSFSSSLLPSPLPHPHDTKTNKHRAQVPNFNLIH-CSVTSTNKHTSFSSESAVAAK 64
AS SLS S S+LPSP+ H TK PN NL SV+++ S SS A
Sbjct: 2 ASMSLSLSCSILPSPILH---TKPK------PNTNLTTLVSVSASKTSVSASSTRKPAPA 52
Query: 65 KRLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQW 124
+ K E+P ++ ++T IK KK E KAWV+++ E S + K+ W
Sbjct: 53 PKPPKVREFP----QTLFFENLEKTRIKKKKKMKEETKSGKAWVHSLPEVLSYRIHKRHW 108
Query: 125 FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
AL++F+ML+EQP+YQP+E TYMKL+VLLGKS QP A ++FN + E+G T ELYTA
Sbjct: 109 SIALELFDMLREQPYYQPREDTYMKLIVLLGKSSQPLRAHELFNSIHEDGCGST-ELYTA 167
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+AA+C+N+L+DEA L++M LP+CQPD++TYSTLIKA VD+++FE++E L+ M +R
Sbjct: 168 LIAAFCQNNLVDEALSILDEMMNLPSCQPDIFTYSTLIKALVDSLKFEMVELLFDKMAKR 227
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
S+ PNT TQN++L GYGKAG FDQME+++S M+E TCKPDVWTMNT++SVF +KGQ+D+
Sbjct: 228 SIVPNTYTQNLILSGYGKAGRFDQMEKIVSSMMEGTTCKPDVWTMNTVISVFGDKGQIDI 287
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
ME+WY+KF +FGI P+ TFNILI AYG KRMYDKMSSVM+ MR+++ PWT+STYNNVIE
Sbjct: 288 MEKWYDKFCSFGIQPQRSTFNILIAAYGSKRMYDKMSSVMQCMRRVKCPWTTSTYNNVIE 347
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
AF+ +GDA++ME F+QM+AEG+KADTKTFC LINGYANAG+FHKVISSV LA KLQI
Sbjct: 348 AFAAVGDAENMERAFDQMYAEGLKADTKTFCFLINGYANAGIFHKVISSVSLAEKLQIRV 407
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
N SFYNA+ISAC K D L EMER +K MKEK C PD+ T+S+M EAY KEGMNDK++ LE
Sbjct: 408 NTSFYNAIISACAKDDALTEMERFFKHMKEKECHPDNTTYSVMIEAYRKEGMNDKIHYLE 467
Query: 485 QEKLQML 491
QEK M+
Sbjct: 468 QEKRMMM 474
>gi|388521199|gb|AFK48661.1| unknown [Lotus japonicus]
Length = 266
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 197/254 (77%), Positives = 224/254 (88%)
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M RS+ PNTVTQNIVL GYGKAG FDQME+VLS MLES +CKPDVWTMNT +SVF N G
Sbjct: 1 MAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTTISVFGNMG 60
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
Q+DMME+WYEKFRNFGI+PETRTFNILIGAYGKKRMYDKMS+VMEYMRKLQFPWT+STYN
Sbjct: 61 QIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYN 120
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
NVIEAF+D+GDAK MEY F+QM AEGMKAD+KTFCCLING+ANAGLFHKVIS+V+LA K
Sbjct: 121 NVIEAFTDVGDAKTMEYAFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKF 180
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+IA N +FYNAV+SAC KA+DLMEMERV+KRMK+ C PD T++IM EAY KEGMNDK+
Sbjct: 181 EIAVNTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKI 240
Query: 481 YALEQEKLQMLLEA 494
Y LEQEK M+ +
Sbjct: 241 YYLEQEKKTMITDG 254
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 109/241 (45%), Gaps = 1/241 (0%)
Query: 170 MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM 229
M I P +L+ Y + D+ L+ M +C+PDV+T +T I +
Sbjct: 1 MAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTTISVFGNMG 60
Query: 230 RFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM 289
+ +++E Y+ + P T T NI++G YGK M+D+M V+ M T
Sbjct: 61 QIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYM-RKLQFPWTTSTY 119
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
N ++ F + G ME +++ R G+ +++TF LI + ++ K+ S ++ K
Sbjct: 120 NNVIEAFTDVGDAKTMEYAFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEK 179
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
+ ++ YN V+ A + D ME F++M D T+ +I Y G+ K
Sbjct: 180 FEIAVNTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK 239
Query: 410 V 410
+
Sbjct: 240 I 240
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 94/215 (43%), Gaps = 2/215 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
Q +V + E +P T + + G GQ ++ K + + GIEP + L
Sbjct: 28 QMEKVLSSMLESTSCKPDVWTMNTTISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNIL 87
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ AY + + D+ + M+ L TY+ +I+A D + +E + M
Sbjct: 88 IGAYGKKRMYDKMSTVMEYMRKL-QFPWTTSTYNNVIEAFTDVGDAKTMEYAFDQMRAEG 146
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ ++ T ++ G+ AG+F ++ + + E + N +LS + M
Sbjct: 147 MKADSKTFCCLINGFANAGLFHKVISTVQ-LAEKFEIAVNTTFYNAVLSACTKAEDLMEM 205
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
ER +++ ++ P+ T+ I+I AY K+ M DK+
Sbjct: 206 ERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKI 240
>gi|449443726|ref|XP_004139628.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Cucumis sativus]
Length = 456
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 178/390 (45%), Positives = 239/390 (61%), Gaps = 10/390 (2%)
Query: 87 KRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGT 146
KR P N KK L R TV E D + +W AL+VFE+L+EQ +Y+P G
Sbjct: 53 KRGP-NNSKKLLPR---------TVLEALHDRITTLRWESALKVFELLREQLWYRPYAGM 102
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y+KL+V+LGK Q E A ++F EM+EEG E + E YTALL+AY R+ L+DEAF LN+MK
Sbjct: 103 YIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTALLSAYSRSGLLDEAFSILNEMK 162
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
P+CQPDV+TYS LIK+C+ F +TL DM R + PNT+T N + YGKA MF
Sbjct: 163 NSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTITYNTFIDAYGKAKMF 222
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
+ME +L ML CKPDVWTMN+ L F GQ++ ME+ YEKF+ GI P +TFNI
Sbjct: 223 AEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEAGIQPSIQTFNI 282
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
L+ +YGK Y+KMS+VMEYM+K + WT TYN VI+AF G+ K ME+ F M +E
Sbjct: 283 LLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQMEHLFRLMRSER 342
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+K T C L+ Y AG K+ S + L I + FYN ++ A + + EM+
Sbjct: 343 IKPSCVTLCSLVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYNCLVDAYGRLECFAEMK 402
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+V M+++ C+PD T+ M AY+ GM
Sbjct: 403 KVLGMMEQRGCKPDKTTYRTMARAYSDGGM 432
>gi|449475395|ref|XP_004154439.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Cucumis sativus]
Length = 511
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 178/399 (44%), Positives = 243/399 (60%), Gaps = 10/399 (2%)
Query: 87 KRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGT 146
KR P N KK L R TV E D + +W AL+VFE+L+EQ +Y+P G
Sbjct: 108 KRGP-NNSKKLLPR---------TVLEALHDRITTLRWESALKVFELLREQLWYRPYAGM 157
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y+KL+V+LGK Q E A ++F EM+EEG E + E YTALL+AY R+ L+DEAF LN+MK
Sbjct: 158 YIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTALLSAYSRSGLLDEAFSILNEMK 217
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
P+CQPDV+TYS LIK+C+ F +TL DM R + PNT+T N + YGKA MF
Sbjct: 218 NSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTITYNTFIDAYGKAKMF 277
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
+ME +L ML CKPDVWTMN+ L F GQ++ ME+ YEKF+ GI P +TFNI
Sbjct: 278 AEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEAGIQPSIQTFNI 337
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
L+ +YGK Y+KMS+VMEYM+K + WT TYN VI+AF G+ K ME+ F M +E
Sbjct: 338 LLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQMEHLFRLMRSER 397
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+K T C L+ Y AG K+ S + L I + FYN ++ A + + EM+
Sbjct: 398 IKPSCVTLCSLVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYNCLVDAYGRLECFAEMK 457
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
+V M+++ C+PD T+ M AY+ GM + +++
Sbjct: 458 KVLGMMEQRGCKPDKTTYRTMARAYSDGGMANHAKEIQE 496
>gi|356527376|ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Glycine max]
Length = 515
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 168/376 (44%), Positives = 231/376 (61%)
Query: 110 TVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNE 169
TV E + V +W AL+VFE+L EQ +Y+P G Y+KL+V+LGK QPE A ++F
Sbjct: 123 TVLEALHERVTALRWESALKVFELLHEQIWYKPDTGVYIKLIVMLGKCKQPEKAHELFQA 182
Query: 170 MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM 229
MV+EG E YTALL+AY R+ L+D+AF L +MK P CQPDV TYS L+K+C+
Sbjct: 183 MVDEGCVLDCESYTALLSAYSRSGLLDKAFSLLEEMKNTPGCQPDVQTYSILLKSCLQVF 242
Query: 230 RFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM 289
F+ I++L DM R + PNTVT N ++ YGKA F +ME +L ML C+PDVWTM
Sbjct: 243 AFDKIQSLLSDMTNRGIKPNTVTYNTLIDAYGKARKFSEMESILVEMLADRYCQPDVWTM 302
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
N+ L F N GQ++ ME+ YEKF+N GI P +TFNIL+ +YGK + Y KMS+VMEYM+K
Sbjct: 303 NSTLRAFGNIGQIETMEKCYEKFQNAGIQPNVQTFNILLDSYGKAQDYKKMSAVMEYMQK 362
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
+ WT T+N VI+AF GD K MEY F M +E +K T C L+ YA AG K
Sbjct: 363 YHYSWTIVTFNIVIDAFGKAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEK 422
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+ +R + + F+N ++ A + L EM+ V + MK+ C+PD T+ M +
Sbjct: 423 ISGVLRFVENSDVLLDTVFFNCLVDAYARLGCLAEMKGVLEMMKQNGCKPDIVTYRTMIK 482
Query: 470 AYAKEGMNDKVYALEQ 485
Y +GM+ L +
Sbjct: 483 TYTYKGMDSHAKELRE 498
>gi|255553476|ref|XP_002517779.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543051|gb|EEF44586.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 486
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 164/408 (40%), Positives = 260/408 (63%)
Query: 91 IKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKL 150
IK +++K + + W V E D + +++W AL++FE+L++Q +Y+P+ TY KL
Sbjct: 75 IKAIEQKADSSKYNRLWPKAVLEALDDAIKERRWKSALKIFELLRKQHWYEPRCQTYTKL 134
Query: 151 LVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPN 210
L++LGK QPE AR +F M EG+ PT ++YTAL++AY + L+ +AF T+++MK++ +
Sbjct: 135 LMMLGKCRQPEEARLLFEVMQTEGLRPTIDVYTALVSAYGESGLLAKAFSTVDEMKSVSD 194
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
C+PDVYTYS LI C RF+LI + +M V +TVT N ++ GYGKA MF +ME
Sbjct: 195 CKPDVYTYSVLINICTKLHRFDLIGRILSEMSYLGVECSTVTFNTIINGYGKAKMFREME 254
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
L+ M+E PD++T N+++ + N G+++ ME+WY +F+ GI P+ +TFNILI +
Sbjct: 255 NSLTNMIEIGNSVPDLFTFNSVIGAYGNSGRIEKMEKWYNEFQLMGISPDIKTFNILIKS 314
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
YGK MY+K++SV+E+M+K FP T TYN +IE F GD ++M+ F+ M GMK +
Sbjct: 315 YGKAGMYEKINSVIEFMKKRFFPPTVVTYNIIIETFGRAGDIENMDEYFKTMKHLGMKPN 374
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
T+C L++ Y+ AGL KV S +R + + +F+N +I+A +A D+ +M ++
Sbjct: 375 AITYCSLVSAYSKAGLLMKVNSILRQVENSDVVLDTTFFNCIINAYGQAGDVDKMAELFL 434
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGHW 498
M+E+ C PD+ TF+ M +AY +GM + ALE+ L + G W
Sbjct: 435 EMRERECMPDNVTFATMIQAYRGQGMTEAAQALEKMMLAAKGNSGGTW 482
>gi|359480144|ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Vitis vinifera]
gi|297744374|emb|CBI37344.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 172/391 (43%), Positives = 236/391 (60%), Gaps = 10/391 (2%)
Query: 87 KRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGT 146
KR P N KK L R TV E + + +W AL+VFE+L+EQ +Y+P G
Sbjct: 91 KRGP-NNSKKLLPR---------TVLEALHERITALRWESALKVFELLREQLWYRPNSGI 140
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y+KL+V+LGK QPE A +F M++EG E YTALL+AY R+ L D+AF L +MK
Sbjct: 141 YIKLIVMLGKCKQPEKAHALFLAMIDEGCVVNHEAYTALLSAYSRSGLFDKAFSLLEKMK 200
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
P+CQPDV+TYS LIK+C+ + F+ + L DM + + PNTVT N ++ YGKA F
Sbjct: 201 NTPDCQPDVHTYSVLIKSCLQVVAFDKVPVLLSDMANQGIKPNTVTYNTLIDAYGKAKRF 260
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
+ME L ML C+PDVWTMN+ L F + GQ++ ME+ YEKF++ GI+P +TFNI
Sbjct: 261 AEMESTLLEMLREGKCEPDVWTMNSTLRAFGSSGQIETMEKCYEKFQSAGIEPNIKTFNI 320
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
L+ +YGK Y+KMS+VMEYM+K F WT TYN VI+AF GD K MEY F M +E
Sbjct: 321 LLDSYGKAEKYEKMSAVMEYMQKYHFSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMRSER 380
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+K T C L+ Y AG K+ +R + ++ F+N ++ A + EM+
Sbjct: 381 IKPSCVTLCSLVRAYGRAGKAEKIGGVLRFIENSDVMLDIVFFNCLVDAYGRLGCFAEMK 440
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
V + MK+K C+PD T+ M +AY GM
Sbjct: 441 GVLEMMKKKGCKPDKITYRTMIKAYKIGGMT 471
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 128/270 (47%), Gaps = 1/270 (0%)
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
+P+ Y LI + E L+ M + N +L Y ++G+FD+
Sbjct: 135 RPNSGIYIKLIVMLGKCKQPEKAHALFLAMIDEGCVVNHEAYTALLSAYSRSGLFDKAFS 194
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+L M + C+PDV T + ++ D + N GI P T T+N LI AY
Sbjct: 195 LLEKMKNTPDCQPDVHTYSVLIKSCLQVVAFDKVPVLLSDMANQGIKPNTVTYNTLIDAY 254
Query: 332 GKKRMYDKM-SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
GK + + +M S+++E +R+ + T N+ + AF G + ME +E+ + G++ +
Sbjct: 255 GKAKRFAEMESTLLEMLREGKCEPDVWTMNSTLRAFGSSGQIETMEKCYEKFQSAGIEPN 314
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
KTF L++ Y A + K+ + + K + + YN VI A +A DL +ME +++
Sbjct: 315 IKTFNILLDSYGKAEKYEKMSAVMEYMQKYHFSWTIVTYNVVIDAFGRAGDLKQMEYLFR 374
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
M+ + +P T + AY + G +K+
Sbjct: 375 LMRSERIKPSCVTLCSLVRAYGRAGKAEKI 404
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 80/162 (49%), Gaps = 2/162 (1%)
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKL-QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
+ L+ AY + ++DK S++E M+ TY+ +I++ + + M
Sbjct: 176 YTALLSAYSRSGLFDKAFSLLEKMKNTPDCQPDVHTYSVLIKSCLQVVAFDKVPVLLSDM 235
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSV-RLASKLQIAENVSFYNAVISACIKADD 441
+G+K +T T+ LI+ Y A F ++ S++ + + + +V N+ + A +
Sbjct: 236 ANQGIKPNTVTYNTLIDAYGKAKRFAEMESTLLEMLREGKCEPDVWTMNSTLRAFGSSGQ 295
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ ME+ Y++ + P+ +TF+I+ ++Y K +K+ A+
Sbjct: 296 IETMEKCYEKFQSAGIEPNIKTFNILLDSYGKAEKYEKMSAV 337
>gi|242037185|ref|XP_002465987.1| hypothetical protein SORBIDRAFT_01g049600 [Sorghum bicolor]
gi|241919841|gb|EER92985.1| hypothetical protein SORBIDRAFT_01g049600 [Sorghum bicolor]
Length = 480
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 161/392 (41%), Positives = 240/392 (61%)
Query: 95 KKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLL 154
K R+ W V E V +W AL++FE+L++Q +Y+P+ TY +LL++L
Sbjct: 77 KAAAARQQSTNLWPRAVLEALDSAVAACRWESALEIFELLRKQHWYEPRSQTYARLLMML 136
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
GK QP A +F M+ E + PT ++YTAL+ AY + L+DEA + QMK +C+PD
Sbjct: 137 GKCRQPGPAAALFKAMLSERLRPTADVYTALVGAYGYSGLLDEALAAVEQMKGAADCKPD 196
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
YT+S LI C + RF+LI + +M + N+V N ++ GYGKA MF++ME LS
Sbjct: 197 GYTFSVLINCCAKSRRFDLIPAVLDEMSYLGIECNSVIHNAIIDGYGKAAMFEEMEGALS 256
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
MLES + PD++TMN+++ + N G+ D ME+ Y +F+ G++P+T+TFNI+I +YGK
Sbjct: 257 AMLESGSNVPDIYTMNSVIGAYGNHGRTDEMEKSYSEFQLMGVEPDTKTFNIMIKSYGKA 316
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
MYDKM S+ YM+K F T+ T+N VIE F G+ + MEY F M +G+K + T+
Sbjct: 317 GMYDKMMSIFRYMKKRFFSPTAVTFNTVIECFGRAGNIEKMEYYFRLMKIQGVKPNPITY 376
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
C L+NGY+ AGL KV +R + + F+N VISA K+ D+ ME + + MKE
Sbjct: 377 CSLVNGYSKAGLLDKVPGIIRQTENTNVVLDTPFFNCVISAYAKSGDIKIMEEMLQLMKE 436
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
K C+PD T++ M +AY +GM++ LE E
Sbjct: 437 KKCKPDKITYATMIQAYTAQGMDEAARLLEME 468
>gi|255578090|ref|XP_002529915.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530592|gb|EEF32469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 636
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 176/410 (42%), Positives = 244/410 (59%), Gaps = 16/410 (3%)
Query: 87 KRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGT 146
KR P N KK L R TV E + + +W AL+VFE+L+EQ +Y+P G
Sbjct: 108 KRGPT-NSKKLLPR---------TVLEALHERITALRWESALKVFELLREQIWYRPYSGM 157
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y+KL+V+LGK QPE A ++F M+ EG + + E YTALL+AY R+ L+D+AF L +MK
Sbjct: 158 YIKLIVMLGKCKQPEKAHELFQAMIHEGCDVSHESYTALLSAYGRSGLLDKAFSLLEEMK 217
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
P+CQPDV+TYS LIK+CV F+ +TL +M+ ++PNT+T N ++ YGKA MF
Sbjct: 218 RNPDCQPDVHTYSILIKSCVQVFAFDKAKTLLSNMESLGISPNTITYNTLIDAYGKAKMF 277
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
++ME L ML C+PDVWTMN+ L F GQ++ ME+ YEKF+ GI+P TFN+
Sbjct: 278 EEMEATLVKMLSQQNCEPDVWTMNSTLRAFGISGQIETMEKCYEKFQGAGIEPSIMTFNV 337
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
L+ +YGK Y KMS+VMEYM+K + WT TYN VI+AF GD K MEY F M +E
Sbjct: 338 LLDSYGKAGDYKKMSAVMEYMQKYHYSWTIITYNIVIDAFGRAGDLKQMEYLFRLMRSER 397
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+K T C L+ Y A K+ +R I + F+N ++ A + EM+
Sbjct: 398 IKPSCVTLCSLVRAYGQAEKPEKIEGVLRFIENSDITLDTVFFNCLVDAYGRMGCFAEMK 457
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
V M++K RPD T+ M +AY+ +GM V L+ LEA+G
Sbjct: 458 GVLILMEQKGYRPDKITYRTMIKAYSSKGMTKHVKELQD------LEAAG 501
>gi|414864365|tpg|DAA42922.1| TPA: hypothetical protein ZEAMMB73_846849 [Zea mays]
Length = 485
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 159/392 (40%), Positives = 238/392 (60%)
Query: 95 KKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLL 154
K R+ W V E V +W AL++FE+L++Q +Y+P+ TY +LL++L
Sbjct: 76 KAAAARQQSTNLWPRAVLEALDSAVAACRWESALEIFELLRKQHWYEPRSQTYARLLMML 135
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
GK QP A +F EM+ E + PT ++YTAL+ AY + L++ A + QMK +C+PD
Sbjct: 136 GKCRQPGPAAGLFREMLSERLRPTADVYTALIGAYGYSGLLEHALAAVEQMKGAADCKPD 195
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
YT+S L+ C + RF+LI + +M + N+V N ++ GYGKA MF++ME LS
Sbjct: 196 GYTFSVLVDCCAKSRRFDLIPAVLDEMSYLGIECNSVIHNAIIDGYGKAAMFEEMEGALS 255
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
MLES + PD++TMN+++ + N G+ D ME+ Y +F+ G++P+T+TFNI+I +YGK
Sbjct: 256 TMLESGSNVPDIYTMNSVVGAYGNHGRTDEMEKSYSEFQLMGVEPDTKTFNIMIRSYGKA 315
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
MY KM S+ YM+K F T+ T+N VIE F GD + MEY F M +G+K + T+
Sbjct: 316 GMYVKMMSIFRYMKKRFFSPTAVTFNTVIECFGRAGDIEKMEYYFRLMKIQGVKPNPITY 375
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
C L+NGY+ AGL KV +R + + F+N VISA K+ D+ ME + + MKE
Sbjct: 376 CSLVNGYSKAGLLDKVAGVIRQTENTNVVLDTPFFNCVISAYAKSGDIKIMEEMLQLMKE 435
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
K C+PD T++ M +AY GM++ LE E
Sbjct: 436 KRCKPDRITYATMIQAYTAHGMDEAAMLLEIE 467
>gi|357458279|ref|XP_003599420.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488468|gb|AES69671.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 511
Score = 337 bits (864), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 175/457 (38%), Positives = 269/457 (58%), Gaps = 26/457 (5%)
Query: 42 IHCSVTSTNKHTSFSSESAVAAKKRLWKEGEYPGVSETSIPGYRS-KRTPIKNLK----- 95
I CS NK+ SS V + KR +S P Y ++ P K+L
Sbjct: 28 ITCSTKFPNKNHFHSSSFRVYSLKR------------SSKPSYEGLQKDPKKDLSRILRT 75
Query: 96 ----KKLERKAKA----KAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTY 147
K +E KAK+ + W V E D + QW AL +FE+L+ Q +Y+P+ TY
Sbjct: 76 EAAIKGVENKAKSWKHKQLWPKAVLEALDDAIKGCQWQNALMIFELLRNQYWYEPRCQTY 135
Query: 148 MKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKT 207
KLL++L K QP+ A +++ M+ EG++PT ++ TAL++AY ++ L AF T+ MK+
Sbjct: 136 TKLLMMLSKCKQPKEASQLYETMLFEGLKPTVDVLTALVSAYGQSGLFRHAFSTIEDMKS 195
Query: 208 LPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFD 267
+ +C+PDVYTYS LI C RF+LIE + DM + N+VT N ++ GYGKAGMF+
Sbjct: 196 VVDCKPDVYTYSVLISCCAKFRRFDLIERVLADMSYSGIECNSVTYNSIIDGYGKAGMFE 255
Query: 268 QMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
QME L+ M+E+ C+PDV+T+N+++ + N G++D ME+WY++F+ I P+ +TFN++
Sbjct: 256 QMENSLTDMIENENCQPDVFTLNSLIGSYGNGGKIDKMEKWYDEFQLMSIKPDIKTFNMM 315
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
I +YGK MYDKM SVM++M + F T TYN VIE + G+ + M+ F+ M GM
Sbjct: 316 IKSYGKAGMYDKMKSVMDFMERRFFAPTIVTYNTVIEVYGKAGEIEKMDKHFKNMKHIGM 375
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
K ++ T+C L+N Y+ AGL K+ S +R + + F+N +ISA + DL +M
Sbjct: 376 KPNSVTYCSLVNAYSKAGLIRKIDSILRHVENSDVILDTPFFNCIISAYGQVGDLKKMGE 435
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
++ M+ + C PD TF+ M +AY +G+ + LE
Sbjct: 436 LFLAMRARKCEPDRTTFTCMIQAYNTQGITEAAKNLE 472
>gi|297736301|emb|CBI24939.3| unnamed protein product [Vitis vinifera]
Length = 485
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 181/477 (37%), Positives = 282/477 (59%), Gaps = 25/477 (5%)
Query: 22 PHPHDTKTNKHRAQVP-NFNLIHCSVTSTNKHTSFSSESAVAAKKRLWKEGEYPGVSETS 80
PH D + + + +P + V K TS V A KR G S+
Sbjct: 3 PHLLDPTSLRWSSSIPLTYTTCSLKVLKETKPTSNPPFLFVRAGKR------SSGSSQNG 56
Query: 81 IPGYRSKRTPIKNLKKKL---------ERKAKAKA----WVNTVAETFSDHVLKKQWFQA 127
+ +R P K+L + L ERKA ++ W V E + + + ++ A
Sbjct: 57 L-----QRQPKKDLSRILRTEAAISGIERKANSRKYSTLWPKAVLEALDEAIRENRYESA 111
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
L++F +L++Q +Y+P+ TY KLL++LGK QPE A +F M+ EG+ PT ++YTAL++
Sbjct: 112 LKIFGLLRKQHWYEPRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEGLRPTLDVYTALVS 171
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVT 247
AY + +D+AF T+ MK++ +C+PDVYTYS LIK C RF+LIE ++ +M +
Sbjct: 172 AYGHSGQLDKAFCTVEDMKSVSDCKPDVYTYSILIKCCTTLGRFDLIERIFTEMSYLGIE 231
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMER 307
+TVT N ++ GYGKA MF+ ME L+ M+ES TC PD++T+N+ + + N GQ++ ME+
Sbjct: 232 CSTVTYNTIIDGYGKADMFELMESSLTEMIESGTCLPDIFTLNSFIWAYGNSGQIEKMEK 291
Query: 308 WYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS 367
WY++F+ GI P+ +TFNILI +YGK MY+KM SVME+M+K + T T+N VIE F
Sbjct: 292 WYDEFQLMGIRPDIKTFNILIRSYGKACMYEKMVSVMEFMKKRFYSPTIVTFNIVIEMFG 351
Query: 368 DMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVS 427
+G+ + ME F +M +G+K ++ T+C L++ Y+ AG KV S +R + +
Sbjct: 352 RVGNIEKMEEFFLKMKHQGVKPNSITYCSLVSAYSKAGYLKKVDSILRQIENSDVTLDTP 411
Query: 428 FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
F+N V+SA +A D+ M ++ MKE+ C+PD+ TF+ M +AY +GM + LE
Sbjct: 412 FFNCVLSAYGQAGDVERMGELFLVMKERKCKPDNITFATMIQAYNAQGMIEAAQNLE 468
>gi|359487410|ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Vitis vinifera]
Length = 538
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 181/477 (37%), Positives = 282/477 (59%), Gaps = 25/477 (5%)
Query: 22 PHPHDTKTNKHRAQVP-NFNLIHCSVTSTNKHTSFSSESAVAAKKRLWKEGEYPGVSETS 80
PH D + + + +P + V K TS V A KR G S+
Sbjct: 3 PHLLDPTSLRWSSSIPLTYTTCSLKVLKETKPTSNPPFLFVRAGKR------SSGSSQNG 56
Query: 81 IPGYRSKRTPIKNLKKKL---------ERKAKAKA----WVNTVAETFSDHVLKKQWFQA 127
+ +R P K+L + L ERKA ++ W V E + + + ++ A
Sbjct: 57 L-----QRQPKKDLSRILRTEAAISGIERKANSRKYSTLWPKAVLEALDEAIRENRYESA 111
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
L++F +L++Q +Y+P+ TY KLL++LGK QPE A +F M+ EG+ PT ++YTAL++
Sbjct: 112 LKIFGLLRKQHWYEPRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEGLRPTLDVYTALVS 171
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVT 247
AY + +D+AF T+ MK++ +C+PDVYTYS LIK C RF+LIE ++ +M +
Sbjct: 172 AYGHSGQLDKAFCTVEDMKSVSDCKPDVYTYSILIKCCTTLGRFDLIERIFTEMSYLGIE 231
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMER 307
+TVT N ++ GYGKA MF+ ME L+ M+ES TC PD++T+N+ + + N GQ++ ME+
Sbjct: 232 CSTVTYNTIIDGYGKADMFELMESSLTEMIESGTCLPDIFTLNSFIWAYGNSGQIEKMEK 291
Query: 308 WYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS 367
WY++F+ GI P+ +TFNILI +YGK MY+KM SVME+M+K + T T+N VIE F
Sbjct: 292 WYDEFQLMGIRPDIKTFNILIRSYGKACMYEKMVSVMEFMKKRFYSPTIVTFNIVIEMFG 351
Query: 368 DMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVS 427
+G+ + ME F +M +G+K ++ T+C L++ Y+ AG KV S +R + +
Sbjct: 352 RVGNIEKMEEFFLKMKHQGVKPNSITYCSLVSAYSKAGYLKKVDSILRQIENSDVTLDTP 411
Query: 428 FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
F+N V+SA +A D+ M ++ MKE+ C+PD+ TF+ M +AY +GM + LE
Sbjct: 412 FFNCVLSAYGQAGDVERMGELFLVMKERKCKPDNITFATMIQAYNAQGMIEAAQNLE 468
>gi|413944457|gb|AFW77106.1| hypothetical protein ZEAMMB73_510937 [Zea mays]
Length = 492
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 163/385 (42%), Positives = 235/385 (61%), Gaps = 1/385 (0%)
Query: 94 LKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVL 153
L K+ K + TV E D V +W AL+VFE++++Q +Y+P G Y+KL+ +
Sbjct: 91 LDKRKPGKGTRRLLPGTVLEALHDRVAALRWDSALKVFELMRDQVWYKPHIGIYIKLITM 150
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
LGK QPE A ++F M++EG P + YTAL++ Y R+ EAF L++MK P CQP
Sbjct: 151 LGKCKQPEKAHQLFQAMIDEGCAPNLQSYTALVSTYSRSGRFREAFDLLDRMKDTPGCQP 210
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
DV TYS LIK+C+ A FE +++L DM + PNTVT N ++ YGKAG F +ME L
Sbjct: 211 DVQTYSILIKSCLHAYDFEKVKSLLADMARAGIPPNTVTYNTLIDAYGKAGRFAEMESTL 270
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
ML S CKPDVWTMN+ L F + GQ++ ME YEKF+ GI P +T+NIL+ +YGK
Sbjct: 271 LKML-SQNCKPDVWTMNSTLRAFGSSGQIETMESCYEKFQASGIVPNIKTYNILLDSYGK 329
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+MY+KM +VMEYM+K + WT TYN VI+AF GD + MEY F M +E +K + T
Sbjct: 330 AKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVT 389
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
C ++ Y AG K+ +++R+ I ++ F+N ++ A + L EM + MK
Sbjct: 390 LCSVVRAYGRAGEVKKIKTALRIIENSDITLDIVFFNCLVDAYGRVGCLAEMWDILDLMK 449
Query: 454 EKHCRPDSETFSIMTEAYAKEGMND 478
E C+PD T + M + + +G++D
Sbjct: 450 EHRCKPDKVTCTTMIKWFLIKGIDD 474
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 128/285 (44%)
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI 255
D A M+ +P + Y LI + E L+Q M + PN +
Sbjct: 122 DSALKVFELMRDQVWYKPHIGIYIKLITMLGKCKQPEKAHQLFQAMIDEGCAPNLQSYTA 181
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
++ Y ++G F + +L M ++ C+PDV T + ++ + + ++
Sbjct: 182 LVSTYSRSGRFREAFDLLDRMKDTPGCQPDVQTYSILIKSCLHAYDFEKVKSLLADMARA 241
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
GI P T T+N LI AYGK + +M S + M T N+ + AF G + M
Sbjct: 242 GIPPNTVTYNTLIDAYGKAGRFAEMESTLLKMLSQNCKPDVWTMNSTLRAFGSSGQIETM 301
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
E +E+ A G+ + KT+ L++ Y A ++ K+ + + K + + YN VI A
Sbjct: 302 ESCYEKFQASGIVPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDA 361
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+A DL +ME +++ MK + +P+ T + AY + G K+
Sbjct: 362 FGRAGDLEQMEYIFRLMKSERIKPNCVTLCSVVRAYGRAGEVKKI 406
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 124/300 (41%), Gaps = 35/300 (11%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A + + +K+ P QP TY L+ + E + + +M GI P Y L
Sbjct: 194 EAFDLLDRMKDTPGCQPDVQTYSILIKSCLHAYDFEKVKSLLADMARAGIPPNTVTYNTL 253
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ AY + E TL +M + NC+PDV+T ++ ++A + + E +E+ Y+
Sbjct: 254 IDAYGKAGRFAEMESTLLKMLS-QNCKPDVWTMNSTLRAFGSSGQIETMESCYEKFQASG 312
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGM----------------------------- 276
+ PN T NI+L YGKA M+++M V+ M
Sbjct: 313 IVPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQME 372
Query: 277 -----LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
++S KP+ T+ +++ + G+V ++ N I + FN L+ AY
Sbjct: 373 YIFRLMKSERIKPNCVTLCSVVRAYGRAGEVKKIKTALRIIENSDITLDIVFFNCLVDAY 432
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
G+ +M +++ M++ + T +I+ F G H + K DT
Sbjct: 433 GRVGCLAEMWDILDLMKEHRCKPDKVTCTTMIKWFLIKGIDDHRVQYLRDLKDGRAKDDT 492
>gi|115466680|ref|NP_001056939.1| Os06g0172000 [Oryza sativa Japonica Group]
gi|55773690|dbj|BAD72273.1| putative PPR2 [Oryza sativa Japonica Group]
gi|113594979|dbj|BAF18853.1| Os06g0172000 [Oryza sativa Japonica Group]
gi|215697063|dbj|BAG91057.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218197679|gb|EEC80106.1| hypothetical protein OsI_21852 [Oryza sativa Indica Group]
gi|222635046|gb|EEE65178.1| hypothetical protein OsJ_20289 [Oryza sativa Japonica Group]
Length = 511
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 165/392 (42%), Positives = 235/392 (59%), Gaps = 10/392 (2%)
Query: 87 KRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGT 146
KR P K ++ L R TV E + + +W AL+VF+++++Q +Y+P G
Sbjct: 112 KRKPGKGTRRLLPR---------TVLEALHERITALRWDSALKVFDLMRDQVWYRPYVGI 162
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y+KL+ +LGK QPE A ++F MV+EG P E YTAL++AY R+ D AF L QMK
Sbjct: 163 YVKLITMLGKCKQPERAHELFQAMVDEGCAPNLESYTALVSAYSRSGRFDRAFSLLEQMK 222
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
P C+PDV TYS LIK+C+ A FE ++ L +DM + PN VT N ++ YGKAG F
Sbjct: 223 ATPGCRPDVQTYSILIKSCLHAYDFERVKYLMEDMARAGIRPNVVTYNTLIDAYGKAGRF 282
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
+ME L ML + CKPDVWTMN+ L F GQ++ ME YEKF+ GI P +T+NI
Sbjct: 283 AEMESTLLEML-TENCKPDVWTMNSTLRAFGGSGQIETMESCYEKFQASGISPNIKTYNI 341
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
L+ +YGK +MY+KM +VMEYM+K + WT TYN VI+AF GD + MEY F M +E
Sbjct: 342 LLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSER 401
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+K + T C L+ Y AG K+ + +R+ I ++ F+N ++ A + L EM
Sbjct: 402 IKPNCVTLCSLVRAYGRAGDVKKIKTVLRIVENSDITLDIVFFNCLVDAFGRVGCLAEMW 461
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
V MK + C+PD T + M + + +G++D
Sbjct: 462 DVLDIMKLQRCKPDKVTCTTMIKWFLIKGIDD 493
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 129/285 (45%)
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI 255
D A + M+ +P V Y LI + E L+Q M + PN +
Sbjct: 141 DSALKVFDLMRDQVWYRPYVGIYVKLITMLGKCKQPERAHELFQAMVDEGCAPNLESYTA 200
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
++ Y ++G FD+ +L M + C+PDV T + ++ + + ++ E
Sbjct: 201 LVSAYSRSGRFDRAFSLLEQMKATPGCRPDVQTYSILIKSCLHAYDFERVKYLMEDMARA 260
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
GI P T+N LI AYGK + +M S + M T N+ + AF G + M
Sbjct: 261 GIRPNVVTYNTLIDAYGKAGRFAEMESTLLEMLTENCKPDVWTMNSTLRAFGGSGQIETM 320
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
E +E+ A G+ + KT+ L++ Y A ++ K+ + + K + + YN VI A
Sbjct: 321 ESCYEKFQASGISPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDA 380
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+A DL +ME +++ MK + +P+ T + AY + G K+
Sbjct: 381 FGRAGDLEQMEYIFRLMKSERIKPNCVTLCSLVRAYGRAGDVKKI 425
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 118/283 (41%), Gaps = 35/283 (12%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A + E +K P +P TY L+ + E + + +M GI P Y L
Sbjct: 213 RAFSLLEQMKATPGCRPDVQTYSILIKSCLHAYDFERVKYLMEDMARAGIRPNVVTYNTL 272
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ AY + E TL +M T NC+PDV+T ++ ++A + + E +E+ Y+
Sbjct: 273 IDAYGKAGRFAEMESTLLEMLT-ENCKPDVWTMNSTLRAFGGSGQIETMESCYEKFQASG 331
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGM----------------------------- 276
++PN T NI+L YGKA M+++M V+ M
Sbjct: 332 ISPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQME 391
Query: 277 -----LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
++S KP+ T+ +++ + G V ++ N I + FN L+ A+
Sbjct: 392 YIFRLMKSERIKPNCVTLCSLVRAYGRAGDVKKIKTVLRIVENSDITLDIVFFNCLVDAF 451
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKH 374
G+ +M V++ M+ + T +I+ F G H
Sbjct: 452 GRVGCLAEMWDVLDIMKLQRCKPDKVTCTTMIKWFLIKGIDDH 494
>gi|334188265|ref|NP_199684.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635750|sp|Q9FKC3.2|PP424_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g48730, chloroplastic; Flags: Precursor
gi|332008334|gb|AED95717.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 508
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 170/413 (41%), Positives = 244/413 (59%), Gaps = 7/413 (1%)
Query: 87 KRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGT 146
+R K++ +K +K K TV E+ + + +W A+QVFE+L+EQ +Y+P G
Sbjct: 95 RREATKSIIEK--KKGSKKLLPRTVLESLHERITALRWESAIQVFELLREQLWYKPNVGI 152
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y+KL+V+LGK QPE A ++F EM+ EG E+YTAL++AY R+ D AF L +MK
Sbjct: 153 YVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMK 212
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
+ NCQPDV+TYS LIK+ + F+ ++ L DM + + PNT+T N ++ YGKA MF
Sbjct: 213 SSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMF 272
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
+ME L ML CKPD WTMN+ L F GQ++MME YEKF++ GI+P RTFNI
Sbjct: 273 VEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNI 332
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
L+ +YGK Y KMS+VMEYM+K + WT TYN VI+AF GD K MEY F M +E
Sbjct: 333 LLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSER 392
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+ T C L+ Y A K+ +R I ++ F+N ++ A + + EM+
Sbjct: 393 IFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMK 452
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGHWQ 499
V + M++K +PD T+ M +AY GM V ++L ++E+ G Q
Sbjct: 453 GVLELMEKKGFKPDKITYRTMVKAYRISGMTTHV-----KELHGVVESVGEAQ 500
>gi|224069810|ref|XP_002303045.1| predicted protein [Populus trichocarpa]
gi|222844771|gb|EEE82318.1| predicted protein [Populus trichocarpa]
Length = 388
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 157/348 (45%), Positives = 222/348 (63%)
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
VFE+L+EQ +Y+P G Y+KL+V+LGK QP+ A ++F M++EG T E YTALL+AY
Sbjct: 16 VFELLREQLWYRPYAGMYVKLIVMLGKCKQPDKAHQLFQAMIDEGCAVTHESYTALLSAY 75
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
R+ L D+AF + +MK P+C+PDV+TYS LIK+C+ F+ ++ L DM+ + PN
Sbjct: 76 GRSGLFDKAFSIMEEMKNTPDCRPDVHTYSILIKSCLQVFAFDKVQVLLSDMESLGIRPN 135
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
TVT N V+ YGKA MF +ME L ML C+PDVWTMN+ + F GQ++MME Y
Sbjct: 136 TVTYNTVIDAYGKAKMFAEMEATLMEMLSQQDCEPDVWTMNSTIRAFGGSGQMEMMENCY 195
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
EKF++ GI+P +TFNIL+ +YGK Y KMS+VMEYM++ + WT TYN VI+AF
Sbjct: 196 EKFQSAGIEPNIKTFNILLDSYGKAGNYQKMSAVMEYMQRYHYSWTIVTYNVVIDAFGRA 255
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFY 429
GD K MEY F M +E +K T C L+ Y AG K+ S +R + + F+
Sbjct: 256 GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYREAGKPEKIGSVLRFIENSDVTLDTVFF 315
Query: 430 NAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
N ++ A + + EM+ V + M+EK C+PD T+ M +AY+ +GM
Sbjct: 316 NCLVDAYGRLECFAEMKEVLELMEEKGCKPDKVTYRTMIKAYSIKGMT 363
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 126/249 (50%), Gaps = 9/249 (3%)
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT----MNTI 292
L+Q M + + +L YG++G+FD+ ++ M + C+PDV T + +
Sbjct: 52 LFQAMIDEGCAVTHESYTALLSAYGRSGLFDKAFSIMEEMKNTPDCRPDVHTYSILIKSC 111
Query: 293 LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM-SSVMEYMRKLQ 351
L VFA D ++ + GI P T T+N +I AYGK +M+ +M +++ME + +
Sbjct: 112 LQVFA----FDKVQVLLSDMESLGIRPNTVTYNTVIDAYGKAKMFAEMEATLMEMLSQQD 167
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
T N+ I AF G + ME +E+ + G++ + KTF L++ Y AG + K+
Sbjct: 168 CEPDVWTMNSTIRAFGGSGQMEMMENCYEKFQSAGIEPNIKTFNILLDSYGKAGNYQKMS 227
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
+ + + + + YN VI A +A DL +ME +++ M+ + +P T + AY
Sbjct: 228 AVMEYMQRYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAY 287
Query: 472 AKEGMNDKV 480
+ G +K+
Sbjct: 288 REAGKPEKI 296
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 120/284 (42%), Gaps = 36/284 (12%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A + E +K P +P TY L+ + + + + ++M GI P Y +
Sbjct: 83 KAFSIMEEMKNTPDCRPDVHTYSILIKSCLQVFAFDKVQVLLSDMESLGIRPNTVTYNTV 142
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ AY + + E TL +M + +C+PDV+T ++ I+A + + E++E Y+
Sbjct: 143 IDAYGKAKMFAEMEATLMEMLSQQDCEPDVWTMNSTIRAFGGSGQMEMMENCYEKFQSAG 202
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ PN T NI+L YGKAG + +M V+ M + + T N ++ F G + M
Sbjct: 203 IEPNIKTFNILLDSYGKAGNYQKMSAVMEYM-QRYHYSWTIVTYNVVIDAFGRAGDLKQM 261
Query: 306 ERWYEKFRNFGIDP-----------------------------------ETRTFNILIGA 330
E + R+ I P +T FN L+ A
Sbjct: 262 EYLFRLMRSERIKPSCVTLCSLVRAYREAGKPEKIGSVLRFIENSDVTLDTVFFNCLVDA 321
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKH 374
YG+ + +M V+E M + TY +I+A+S G H
Sbjct: 322 YGRLECFAEMKEVLELMEEKGCKPDKVTYRTMIKAYSIKGMTSH 365
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 90/185 (48%), Gaps = 2/185 (1%)
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL-QFPWTSSTY 359
Q D + ++ + G ++ L+ AYG+ ++DK S+ME M+ TY
Sbjct: 45 QPDKAHQLFQAMIDEGCAVTHESYTALLSAYGRSGLFDKAFSIMEEMKNTPDCRPDVHTY 104
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV-RLAS 418
+ +I++ + ++ M + G++ +T T+ +I+ Y A +F ++ +++ + S
Sbjct: 105 SILIKSCLQVFAFDKVQVLLSDMESLGIRPNTVTYNTVIDAYGKAKMFAEMEATLMEMLS 164
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ +V N+ I A + + ME Y++ + P+ +TF+I+ ++Y K G
Sbjct: 165 QQDCEPDVWTMNSTIRAFGGSGQMEMMENCYEKFQSAGIEPNIKTFNILLDSYGKAGNYQ 224
Query: 479 KVYAL 483
K+ A+
Sbjct: 225 KMSAV 229
>gi|356552149|ref|XP_003544432.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Glycine max]
Length = 481
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 155/394 (39%), Positives = 249/394 (63%)
Query: 91 IKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKL 150
I+ + K + + + W + E+ D + + + AL++F +L++Q +YQP+ TY KL
Sbjct: 71 IRGVHNKAKSSSHKQLWPKALLESLDDAIKRCRSHSALEIFALLRKQYWYQPRCRTYAKL 130
Query: 151 LVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPN 210
L++LGK QPE A +F M+ EG++PT ++YTAL++AY ++ L+D+AF T+ MK++ +
Sbjct: 131 LMMLGKCRQPEEASLLFEIMLSEGLKPTVDVYTALVSAYGQSGLLDQAFSTVEDMKSVVD 190
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
C+PDVYTYS LI+ C RF+LIE + +M + N VT N ++ GYGKA MF+QM+
Sbjct: 191 CEPDVYTYSILIRCCAKFRRFDLIEHVLAEMSYLGIKCNCVTYNSIIDGYGKASMFEQMD 250
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
L+ M+E+ PDV+T+N+ + + N GQ+D ME+WY++F+ GI P+ TFN +I +
Sbjct: 251 DALNDMIENGNSHPDVFTLNSFVGAYGNAGQIDKMEKWYDEFQLMGIKPDITTFNTMIKS 310
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
YGK MY+KM +VM++M K F T TYN VIE F G+ + M+ F +M G+K +
Sbjct: 311 YGKAGMYEKMKTVMDFMEKRFFTPTIVTYNTVIEVFGKAGEIEKMDQHFLKMKHLGVKPN 370
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
+ T+C L++ Y+ G KV S +R + + F+N +ISA +A +L +M ++
Sbjct: 371 SITYCSLVSAYSKVGCIDKVDSIMRHVENSDVVLDTPFFNCIISAYGQAGNLKKMGELFL 430
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
M+E+ C PD+ TF+ M ++Y +GM + V LE
Sbjct: 431 AMRERKCEPDNITFACMIQSYNTQGMTEAVQNLE 464
>gi|242092154|ref|XP_002436567.1| hypothetical protein SORBIDRAFT_10g004910 [Sorghum bicolor]
gi|241914790|gb|EER87934.1| hypothetical protein SORBIDRAFT_10g004910 [Sorghum bicolor]
Length = 492
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 161/385 (41%), Positives = 234/385 (60%), Gaps = 1/385 (0%)
Query: 94 LKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVL 153
L K+ K + TV E + V +W AL+VFE++++Q +Y+P G Y+KL+ +
Sbjct: 91 LDKRKPGKGTRRLLPGTVLEALHERVAALRWDSALKVFELMRDQVWYRPYIGIYIKLITM 150
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
LGK +PE A ++F M++EG P E YTAL++AY R+ EAF L++MK P CQP
Sbjct: 151 LGKCKKPEKAHELFQAMIDEGCAPNLESYTALVSAYSRSGRFHEAFNLLDRMKDTPGCQP 210
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
DV TYS LIK+C+ A FE +++L DM + PNTVT N ++ YGKA F +ME L
Sbjct: 211 DVKTYSILIKSCLHAYDFEKVKSLLTDMARAGIRPNTVTYNTLIDAYGKARRFPEMESTL 270
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
ML S CKPD+WTMN+ L F + GQ++ ME YEKF+ GI P +T+NIL+ +YGK
Sbjct: 271 LKML-SQNCKPDIWTMNSTLRAFGSSGQIETMESCYEKFQASGIVPNIKTYNILLDSYGK 329
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+MY+KM +VMEYM+K + WT TYN VI+AF GD + MEY F M +E +K + T
Sbjct: 330 AKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVT 389
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
C ++ Y AG K+ + +R+ I ++ F+N ++ A + L EM + MK
Sbjct: 390 LCSVVRAYGRAGEVKKIKTVLRIVENSDITLDIVFFNCLVDAYGRVGCLAEMWDILDLMK 449
Query: 454 EKHCRPDSETFSIMTEAYAKEGMND 478
E C+PD T + M + + +G++D
Sbjct: 450 EHRCKPDKVTCATMIKWFLIKGIDD 474
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 129/285 (45%)
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI 255
D A M+ +P + Y LI + E L+Q M + PN +
Sbjct: 122 DSALKVFELMRDQVWYRPYIGIYIKLITMLGKCKKPEKAHELFQAMIDEGCAPNLESYTA 181
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
++ Y ++G F + +L M ++ C+PDV T + ++ + + ++
Sbjct: 182 LVSAYSRSGRFHEAFNLLDRMKDTPGCQPDVKTYSILIKSCLHAYDFEKVKSLLTDMARA 241
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
GI P T T+N LI AYGK R + +M S + M T N+ + AF G + M
Sbjct: 242 GIRPNTVTYNTLIDAYGKARRFPEMESTLLKMLSQNCKPDIWTMNSTLRAFGSSGQIETM 301
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
E +E+ A G+ + KT+ L++ Y A ++ K+ + + K + + YN VI A
Sbjct: 302 ESCYEKFQASGIVPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDA 361
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+A DL +ME +++ MK + +P+ T + AY + G K+
Sbjct: 362 FGRAGDLEQMEYIFRLMKSERIKPNCVTLCSVVRAYGRAGEVKKI 406
>gi|125542133|gb|EAY88272.1| hypothetical protein OsI_09727 [Oryza sativa Indica Group]
Length = 450
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 155/388 (39%), Positives = 238/388 (61%), Gaps = 1/388 (0%)
Query: 100 RKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQ 159
R+ + W V E V +W AL++FE+L++Q +Y+P+ TY +LL++LGK Q
Sbjct: 45 RQQSTRLWPRAVLEALDSAVASCRWESALEIFELLRKQQWYKPRSQTYARLLMMLGKCRQ 104
Query: 160 PELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYS 219
P A +F M+ E ++PT ++YTAL+ AY + L+DEA T+ QMK + +C+PD YT+S
Sbjct: 105 PGAATALFKVMLSERLKPTVDVYTALVGAYGYSGLLDEALATVEQMKGVADCKPDEYTFS 164
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
LI C RF+ I + +M + N V N ++ GYGKAGM ++ME L+ MLE
Sbjct: 165 VLINCCSKLRRFDRIPAILDEMSYLGLQCNAVIHNAIIDGYGKAGMLEEMENALTSMLED 224
Query: 280 ATCKPDVWTMNTILSVFANKG-QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
PD++TMN+I+ + N G ++ MERWY +F+ G++P+T+TFNI+I +YG +M+D
Sbjct: 225 GDSVPDIYTMNSIIWAYGNHGNRIHEMERWYSEFQLMGVEPDTQTFNIMIKSYGNAKMHD 284
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
KM SV++YM+K F T T+N +IE+F G+ + MEY F M +G+K + T+C L+
Sbjct: 285 KMMSVLKYMKKHFFSPTVVTFNIIIESFGRAGNIEKMEYYFRLMKIQGVKPNPITYCSLV 344
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
NGY+ AG KV +R + + F+N VI A K+ D+ ME + + MKEK C+
Sbjct: 345 NGYSKAGFLDKVPGIIRQTENTDVVLDTPFFNCVIDAYAKSGDIKIMEEMLQLMKEKKCK 404
Query: 459 PDSETFSIMTEAYAKEGMNDKVYALEQE 486
PD T++ M +AY GM++ L+ E
Sbjct: 405 PDKVTYTTMIQAYNVHGMDEAANLLKME 432
>gi|224104097|ref|XP_002313317.1| predicted protein [Populus trichocarpa]
gi|222849725|gb|EEE87272.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 158/394 (40%), Positives = 246/394 (62%)
Query: 91 IKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKL 150
IK +++K K W V E D + + QW AL++FE+L++Q +Y+P+ TY KL
Sbjct: 62 IKAIEQKANSKKYNNLWPKAVLEALDDAIKENQWESALKIFELLRKQHWYEPRTKTYTKL 121
Query: 151 LVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPN 210
L++LGK QPE +F M+ +G++PT ++YTAL++AY ++ +D+AF + +MK +
Sbjct: 122 LMMLGKCRQPEEGSFLFEVMLSDGLKPTIDVYTALVSAYGKSGQLDKAFSIVVEMKAISE 181
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
C+PDVYTYS LI C+ RFELI + +M + +TVT N ++ GYGKA MF++ME
Sbjct: 182 CKPDVYTYSILINCCIKLHRFELIRGILAEMSYLGIECSTVTYNTIIDGYGKAKMFEEME 241
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
L+ M+ES + PD++T N+I+ + +KG++D ME+WY +F+ G+ + +TFNILI +
Sbjct: 242 NTLTDMIESGSSVPDLFTFNSIIGAYGSKGRIDKMEKWYTEFQLMGLRQDIKTFNILIRS 301
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
YGK MY KM SV+E+M K F + T+N IE F GD + ME F +M G+K +
Sbjct: 302 YGKAGMYGKMRSVLEFMEKRFFSPSIVTHNIFIETFGKAGDIETMEEYFSKMKHLGIKPN 361
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
T T+C L++ Y+ AG KV S +R + + F+N VISA +A D+ +M ++
Sbjct: 362 TVTYCSLVSAYSKAGHIMKVDSILRQVENSDVILDTPFFNCVISAYGRAGDIEKMSELFL 421
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
M+ + C+PDS TF+ M +AY +GM + +E
Sbjct: 422 GMEGRKCKPDSITFATMIQAYNAQGMIEAAQGME 455
>gi|115450301|ref|NP_001048751.1| Os03g0115300 [Oryza sativa Japonica Group]
gi|113547222|dbj|BAF10665.1| Os03g0115300 [Oryza sativa Japonica Group]
Length = 442
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 154/388 (39%), Positives = 238/388 (61%), Gaps = 1/388 (0%)
Query: 100 RKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQ 159
R+ + W V E V +W AL++FE+L++Q +Y+P+ TY +LL++LGK Q
Sbjct: 45 RQHSTRLWPRAVLEALDSAVASCRWEPALEIFELLRKQQWYKPRSQTYARLLMMLGKCQQ 104
Query: 160 PELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYS 219
P A +F M+ E ++PT ++YTAL+ AY + L+D+A T+ QMK + +C+PD YT+S
Sbjct: 105 PGAATALFKVMLSERLKPTVDVYTALVGAYGYSGLLDQALATVEQMKGVADCKPDEYTFS 164
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
LI C RF+ I + +M + N V N ++ GYGKAGM ++ME L+ MLE
Sbjct: 165 VLINCCSKLRRFDRIPAILDEMSYLGLQCNAVIHNAIIDGYGKAGMLEEMENALTSMLED 224
Query: 280 ATCKPDVWTMNTILSVFANKG-QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
PD++TMN+I+ + N G ++ MERWY +F+ G++P+T+TFNI+I +YG +M+D
Sbjct: 225 GDSVPDIYTMNSIIWAYGNHGNRIHEMERWYSEFQLMGVEPDTQTFNIMIKSYGNAKMHD 284
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
KM SV++YM+K F T T+N +IE+F G+ + MEY F M +G+K + T+C L+
Sbjct: 285 KMMSVLKYMKKHFFSPTVVTFNIIIESFGRAGNIEKMEYYFRLMKIQGVKPNPITYCSLV 344
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
NGY+ AG KV +R + + F+N VI A K+ D+ ME + + MKEK C+
Sbjct: 345 NGYSKAGFLDKVPGIIRQTENTDVVLDTPFFNCVIDAYAKSGDIKIMEEMLQLMKEKKCK 404
Query: 459 PDSETFSIMTEAYAKEGMNDKVYALEQE 486
PD T++ M +AY GM++ L+ E
Sbjct: 405 PDKVTYTTMIQAYNVHGMDEAANLLKME 432
>gi|27476102|gb|AAO17033.1| Hypothetical protein [Oryza sativa Japonica Group]
gi|108705848|gb|ABF93643.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125584686|gb|EAZ25350.1| hypothetical protein OsJ_09164 [Oryza sativa Japonica Group]
Length = 450
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 154/388 (39%), Positives = 238/388 (61%), Gaps = 1/388 (0%)
Query: 100 RKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQ 159
R+ + W V E V +W AL++FE+L++Q +Y+P+ TY +LL++LGK Q
Sbjct: 45 RQHSTRLWPRAVLEALDSAVASCRWEPALEIFELLRKQQWYKPRSQTYARLLMMLGKCQQ 104
Query: 160 PELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYS 219
P A +F M+ E ++PT ++YTAL+ AY + L+D+A T+ QMK + +C+PD YT+S
Sbjct: 105 PGAATALFKVMLSERLKPTVDVYTALVGAYGYSGLLDQALATVEQMKGVADCKPDEYTFS 164
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
LI C RF+ I + +M + N V N ++ GYGKAGM ++ME L+ MLE
Sbjct: 165 VLINCCSKLRRFDRIPAILDEMSYLGLQCNAVIHNAIIDGYGKAGMLEEMENALTSMLED 224
Query: 280 ATCKPDVWTMNTILSVFANKG-QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
PD++TMN+I+ + N G ++ MERWY +F+ G++P+T+TFNI+I +YG +M+D
Sbjct: 225 GDSVPDIYTMNSIIWAYGNHGNRIHEMERWYSEFQLMGVEPDTQTFNIMIKSYGNAKMHD 284
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
KM SV++YM+K F T T+N +IE+F G+ + MEY F M +G+K + T+C L+
Sbjct: 285 KMMSVLKYMKKHFFSPTVVTFNIIIESFGRAGNIEKMEYYFRLMKIQGVKPNPITYCSLV 344
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
NGY+ AG KV +R + + F+N VI A K+ D+ ME + + MKEK C+
Sbjct: 345 NGYSKAGFLDKVPGIIRQTENTDVVLDTPFFNCVIDAYAKSGDIKIMEEMLQLMKEKKCK 404
Query: 459 PDSETFSIMTEAYAKEGMNDKVYALEQE 486
PD T++ M +AY GM++ L+ E
Sbjct: 405 PDKVTYTTMIQAYNVHGMDEAANLLKME 432
>gi|334185941|ref|NP_190885.5| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|332645523|gb|AEE79044.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 499
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 165/485 (34%), Positives = 276/485 (56%), Gaps = 12/485 (2%)
Query: 4 ASASASLSFSSSLLPSPLPHPHDTKTNKHRAQVPNFNLIHCSVTSTNKHTSFSSESAVAA 63
A+ A L FS S++ + P + + P CS N+ T + ++
Sbjct: 16 ANEIAQLGFSRSVVQQHISSPVYFRCIPTISITPTM----CSTKVPNERTEKMNSGLIST 71
Query: 64 KKRLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQ 123
+ ++ + E + T +K +++K + W V E + + + +
Sbjct: 72 RHQVDPKKELSRILRTD--------AAVKGIERKANSEKYLTLWPKAVLEALDEAIKENR 123
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
W AL++F +L++Q +Y+P+ TY KL +LG QP+ A +F M+ EG++PT ++YT
Sbjct: 124 WQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYT 183
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
+L++ Y ++ L+D+AF TL MK++ +C+PDV+T++ LI C RF+L++++ +M
Sbjct: 184 SLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSY 243
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
V +TVT N ++ GYGKAGMF++ME VL+ M+E PDV T+N+I+ + N +
Sbjct: 244 LGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMR 303
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
ME WY +F+ G+ P+ TFNILI ++GK MY KM SVM++M K F T+ TYN VI
Sbjct: 304 KMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVI 363
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
E F G + M+ F +M +G+K ++ T+C L+N Y+ AGL K+ S +R +
Sbjct: 364 ETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVV 423
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ F+N +I+A +A DL M+ +Y +M+E+ C+PD TF+ M + Y G+ D V L
Sbjct: 424 LDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQEL 483
Query: 484 EQEKL 488
E++ +
Sbjct: 484 EKQMI 488
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 1/144 (0%)
Query: 136 EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI 195
E+ F+ TY ++ GK+G+ E VF +M +G++P Y +L+ AY + L+
Sbjct: 348 EKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLV 407
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI 255
+ L Q+ + D ++ +I A A ++ LY M+ER P+ +T
Sbjct: 408 VKIDSVLRQIVN-SDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFAT 466
Query: 256 VLGGYGKAGMFDQMERVLSGMLES 279
++ Y G+FD ++ + M+ S
Sbjct: 467 MIKTYTAHGIFDAVQELEKQMISS 490
>gi|224069806|ref|XP_002303044.1| predicted protein [Populus trichocarpa]
gi|222844770|gb|EEE82317.1| predicted protein [Populus trichocarpa]
Length = 485
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 156/367 (42%), Positives = 224/367 (61%), Gaps = 13/367 (3%)
Query: 110 TVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNE 169
TV E + + +W AL+VFE+L+EQ +Y+P G Y+KL+V+LGK QP+ A ++F
Sbjct: 106 TVLEALHERITALRWASALEVFELLREQLWYRPYAGMYVKLIVMLGKCKQPDKAHQLFQA 165
Query: 170 MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM 229
M++EG T E YTALL+AY R+ L D+AF + +MK P+C+PDV+TYS LIK+C+
Sbjct: 166 MIDEGCAVTHESYTALLSAYGRSGLFDKAFSIMEEMKNTPDCRPDVHTYSILIKSCLQVF 225
Query: 230 RFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM 289
F+ ++ L DM+ + PNTVT F +ME L ML C+PDVWTM
Sbjct: 226 AFDKVQVLLSDMESLGIRPNTVT-------------FAEMEATLMEMLSQQDCEPDVWTM 272
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
N+ + F GQ++MME YEKF++ GI+P +TFNIL+ +YGK Y KMS+VMEYM++
Sbjct: 273 NSTIRAFGGSGQMEMMENCYEKFQSAGIEPNIKTFNILLDSYGKAGNYQKMSAVMEYMQR 332
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
+ WT TYN VI+AF GD K MEY F M +E +K T C L+ Y AG K
Sbjct: 333 YHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYREAGKPEK 392
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+ S +R + + F+N ++ A + + EM+ V + M+EK C+PD T+ M +
Sbjct: 393 IGSVLRFIENSDVTLDTVFFNCLVDAYGRLECFAEMKEVLELMEEKGCKPDKVTYRTMIK 452
Query: 470 AYAKEGM 476
AY+ +GM
Sbjct: 453 AYSIKGM 459
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 115/248 (46%), Gaps = 20/248 (8%)
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT----MNTI 292
L+Q M + + +L YG++G+FD+ ++ M + C+PDV T + +
Sbjct: 162 LFQAMIDEGCAVTHESYTALLSAYGRSGLFDKAFSIMEEMKNTPDCRPDVHTYSILIKSC 221
Query: 293 LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF 352
L VFA D ++ + GI P T TF + +++ME + +
Sbjct: 222 LQVFA----FDKVQVLLSDMESLGIRPNTVTFA------------EMEATLMEMLSQQDC 265
Query: 353 PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVIS 412
T N+ I AF G + ME +E+ + G++ + KTF L++ Y AG + K+ +
Sbjct: 266 EPDVWTMNSTIRAFGGSGQMEMMENCYEKFQSAGIEPNIKTFNILLDSYGKAGNYQKMSA 325
Query: 413 SVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
+ + + + YN VI A +A DL +ME +++ M+ + +P T + AY
Sbjct: 326 VMEYMQRYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYR 385
Query: 473 KEGMNDKV 480
+ G +K+
Sbjct: 386 EAGKPEKI 393
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 80/184 (43%), Gaps = 13/184 (7%)
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL-QFPWTSSTY 359
Q D + ++ + G ++ L+ AYG+ ++DK S+ME M+ TY
Sbjct: 155 QPDKAHQLFQAMIDEGCAVTHESYTALLSAYGRSGLFDKAFSIMEEMKNTPDCRPDVHTY 214
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+ +I++ + ++ M + G++ +T TF A L + S+
Sbjct: 215 SILIKSCLQVFAFDKVQVLLSDMESLGIRPNTVTF-----AEMEATLME-------MLSQ 262
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+V N+ I A + + ME Y++ + P+ +TF+I+ ++Y K G K
Sbjct: 263 QDCEPDVWTMNSTIRAFGGSGQMEMMENCYEKFQSAGIEPNIKTFNILLDSYGKAGNYQK 322
Query: 480 VYAL 483
+ A+
Sbjct: 323 MSAV 326
>gi|75265624|sp|Q9SCP4.1|PP279_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g53170
gi|6630737|emb|CAB64220.1| nodulin / glutamate-ammonia ligase-like protein [Arabidopsis
thaliana]
Length = 447
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 154/397 (38%), Positives = 248/397 (62%), Gaps = 4/397 (1%)
Query: 96 KKLERKAKAKA----WVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLL 151
K +ERKA ++ W V E + + + +W AL++F +L++Q +Y+P+ TY KL
Sbjct: 42 KGIERKANSEKYLTLWPKAVLEALDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLF 101
Query: 152 VLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNC 211
+LG QP+ A +F M+ EG++PT ++YT+L++ Y ++ L+D+AF TL MK++ +C
Sbjct: 102 KVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDC 161
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
+PDV+T++ LI C RF+L++++ +M V +TVT N ++ GYGKAGMF++ME
Sbjct: 162 KPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMES 221
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
VL+ M+E PDV T+N+I+ + N + ME WY +F+ G+ P+ TFNILI ++
Sbjct: 222 VLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSF 281
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
GK MY KM SVM++M K F T+ TYN VIE F G + M+ F +M +G+K ++
Sbjct: 282 GKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNS 341
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
T+C L+N Y+ AGL K+ S +R + + F+N +I+A +A DL M+ +Y +
Sbjct: 342 ITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQ 401
Query: 452 MKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
M+E+ C+PD TF+ M + Y G+ D V LE++ +
Sbjct: 402 MEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMI 438
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
Query: 136 EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI 195
E+ F+ TY ++ GK+G+ E VF +M +G++P Y +L+ AY + L+
Sbjct: 298 EKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLV 357
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI 255
+ L Q+ + D ++ +I A A ++ LY M+ER P+ +T
Sbjct: 358 VKIDSVLRQIVN-SDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFAT 416
Query: 256 VLGGYGKAGMFDQMERVLSGMLESA 280
++ Y G+FD ++ + M+ S
Sbjct: 417 MIKTYTAHGIFDAVQELEKQMISSG 441
>gi|357120957|ref|XP_003562190.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Brachypodium distachyon]
Length = 454
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 155/411 (37%), Positives = 246/411 (59%), Gaps = 6/411 (1%)
Query: 77 SETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKE 136
+E ++ G K T + +++ + W V E V W AL++FE++++
Sbjct: 31 AEAAVSGVSRKATAAVS-----QQQQSTRLWPRAVLEALDSAVASCHWESALEIFELMRK 85
Query: 137 QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMV-EEGIEPTPELYTALLAAYCRNSLI 195
Q +Y+P+ TY +LL++LGK QP A +F M+ EE + PT ++YTAL+ AY + ++
Sbjct: 86 QRWYEPRTRTYARLLMMLGKCRQPGPAAALFRVMLSEERLAPTVDVYTALVGAYGYSGML 145
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI 255
DEA T+ MK +C+PD YT+S LI C + RF+LI + +M + N V N
Sbjct: 146 DEALATVELMKGAADCKPDEYTFSILINCCCKSRRFDLIPPVLDEMSYLGIGCNVVIHNA 205
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
++ GYGKAGM +M L MLE PD++TMN+I+ + N+G+VD ME+WY +F+
Sbjct: 206 IIDGYGKAGMLAEMGTALCNMLEDGDNVPDIYTMNSIIWAYGNRGRVDDMEKWYSEFQLM 265
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G++P++RTFNI+I +YGK M++KM V++YM++ F T++T+N +IE F GD + M
Sbjct: 266 GVEPDSRTFNIMIKSYGKANMHEKMMMVLKYMKRRFFSPTAATFNIIIECFGRAGDIEKM 325
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
EY F M +G+K + T+C L+NGY+ AG+ KV + +R + + F+N VI+A
Sbjct: 326 EYYFRLMKIQGIKPNPITYCSLVNGYSKAGILDKVPAIIRQTENTDVVLDTPFFNCVINA 385
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
K+ D+ ME + + MKEK C+P ++ M +AY GM++ LE E
Sbjct: 386 YAKSGDIKIMEEMLQLMKEKKCKPGKVIYTTMIQAYIAHGMDEAAKLLEIE 436
>gi|357125122|ref|XP_003564244.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Brachypodium distachyon]
Length = 502
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 163/392 (41%), Positives = 233/392 (59%), Gaps = 10/392 (2%)
Query: 87 KRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGT 146
KR P K ++ L R TV E + + +W AL+VFE++++Q +Y+P G
Sbjct: 103 KREPGKGTRRLLPR---------TVLEALHERIAALRWESALKVFELMRDQVWYRPYVGI 153
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y+KL+ +LGK QP A ++F MV+EG P E YTAL++AY R+ D AF L++MK
Sbjct: 154 YIKLITMLGKCKQPGKAHELFQAMVDEGCAPNLESYTALVSAYSRSGSFDRAFSLLDRMK 213
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
P C+PDV TYS LIK+C+ A F+ ++ L DM + PNTVT N ++ YGKAG F
Sbjct: 214 ATPGCRPDVQTYSILIKSCLHAYDFDKVKDLLADMACGGIRPNTVTYNTLVDAYGKAGRF 273
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
+ME L ML S CKPDVWTMN+ L F + GQ++MME YEKF+ GI P +T+NI
Sbjct: 274 AEMESTLLEML-SEKCKPDVWTMNSTLRAFGSSGQIEMMESCYEKFQASGISPNIKTYNI 332
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
L+ +YGK +MY+KM +VMEYM+K + WT TYN VI+AF GD + MEY F M ++
Sbjct: 333 LLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSDR 392
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+K + T C LI Y A K+ + +R+ ++ F+N ++ A + L EM
Sbjct: 393 IKPNCVTLCSLIRAYGRADQVKKIETVLRIIENSDTTLDIVFFNCLVDAYGRVGCLAEMW 452
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
V MK + PD T + M + + +G++D
Sbjct: 453 DVLNMMKLERVSPDKVTCTTMIKWFLVKGIDD 484
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 118/248 (47%), Gaps = 3/248 (1%)
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
L+Q M + PN + ++ Y ++G FD+ +L M + C+PDV T + ++
Sbjct: 173 LFQAMVDEGCAPNLESYTALVSAYSRSGSFDRAFSLLDRMKATPGCRPDVQTYSILIKSC 232
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
+ D ++ GI P T T+N L+ AYGK + +M S + M +
Sbjct: 233 LHAYDFDKVKDLLADMACGGIRPNTVTYNTLVDAYGKAGRFAEMESTLLEMLSEKCKPDV 292
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
T N+ + AF G + ME +E+ A G+ + KT+ L++ Y A ++ K+ + +
Sbjct: 293 WTMNSTLRAFGSSGQIEMMESCYEKFQASGISPNIKTYNILLDSYGKAKMYEKMGAVMEY 352
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
K + + YN VI A +A DL +ME +++ MK +P+ T + AY G
Sbjct: 353 MQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSDRIKPNCVTLCSLIRAY---GR 409
Query: 477 NDKVYALE 484
D+V +E
Sbjct: 410 ADQVKKIE 417
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 122/301 (40%), Gaps = 36/301 (11%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A + + +K P +P TY L+ + + + + +M GI P Y L
Sbjct: 204 RAFSLLDRMKATPGCRPDVQTYSILIKSCLHAYDFDKVKDLLADMACGGIRPNTVTYNTL 263
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ AY + E TL +M + C+PDV+T ++ ++A + + E++E+ Y+
Sbjct: 264 VDAYGKAGRFAEMESTLLEMLS-EKCKPDVWTMNSTLRAFGSSGQIEMMESCYEKFQASG 322
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGM----------------------------- 276
++PN T NI+L YGKA M+++M V+ M
Sbjct: 323 ISPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQME 382
Query: 277 -----LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
++S KP+ T+ +++ + QV +E N + FN L+ AY
Sbjct: 383 YIFRLMKSDRIKPNCVTLCSLIRAYGRADQVKKIETVLRIIENSDTTLDIVFFNCLVDAY 442
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
G+ +M V+ M+ + T +I+ F G H + +G+ D
Sbjct: 443 GRVGCLAEMWDVLNMMKLERVSPDKVTCTTMIKWFLVKGIDDHRVQHLRDLK-DGLSTDN 501
Query: 392 K 392
K
Sbjct: 502 K 502
>gi|449436321|ref|XP_004135941.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
gi|449514880|ref|XP_004164505.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
Length = 477
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 156/413 (37%), Positives = 246/413 (59%), Gaps = 13/413 (3%)
Query: 87 KRTPIKNLKKKLERKAKAKA-------------WVNTVAETFSDHVLKKQWFQALQVFEM 133
+R P K L + L R A KA W V E + + + W AL++F +
Sbjct: 57 QRDPKKGLSRILRRDAAIKAIERKANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGL 116
Query: 134 LKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNS 193
L++Q +Y+P+ TY KLL+LLGK QPE A +F M EG++P+ ++YTAL++AY ++
Sbjct: 117 LRQQQWYEPRCQTYTKLLMLLGKCKQPEQASLLFEIMFSEGLKPSIDVYTALVSAYGQSG 176
Query: 194 LIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQ 253
L+ +A T+++MK++ +C+PDV+TYS LI C RF+L++ + DM +T NTVT
Sbjct: 177 LLHKAISTVDEMKSISDCKPDVHTYSILIDCCTRLRRFDLLKKILADMSCLGITCNTVTY 236
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
N ++ G+GKA MF+QME +L M+ES +C PD+ T NT + + N Q++ ME+WY++F+
Sbjct: 237 NTIINGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKMEKWYKEFQ 296
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
GI+P+ T+N +I +YGK MYDKM SV+ +M K F T T N +I++F G+ +
Sbjct: 297 LMGIEPDIWTYNSMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDSFGRAGNIE 356
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
ME F+ M +GMK ++ T+C L+N Y +G KV S +R + + +N +I
Sbjct: 357 EMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENSDVVPDTPLFNCLI 416
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ +A ++ +M ++ MKE C PD TF+ M A +GM + LE +
Sbjct: 417 NVYGQAGNVRKMGELFLEMKENKCVPDGITFATMIRALKAQGMTEDAQRLENK 469
>gi|297792071|ref|XP_002863920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309755|gb|EFH40179.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 498
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 163/390 (41%), Positives = 226/390 (57%), Gaps = 14/390 (3%)
Query: 95 KKKLERKAKAKAWV-NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVL 153
K+ +E+K +K + TV E+ + + +W ALQVFE+L+EQ +Y+P G Y+KL+V+
Sbjct: 103 KEIIEKKKGSKKLLPRTVLESLHERITALRWESALQVFELLREQLWYKPNVGIYVKLIVM 162
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
LGK QPE A ++F EM+ EG E+YTALL+AY R+ D AF L +MK+ NCQP
Sbjct: 163 LGKCKQPEKAHELFQEMINEGCVVNHEVYTALLSAYSRSGRFDAAFTLLERMKSSHNCQP 222
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
DV+TYS LIK+ + F+ + L DM + PNT+T F +ME L
Sbjct: 223 DVHTYSILIKSFLQVFAFDKVHDLLSDMRRLGIRPNTIT-------------FVEMESTL 269
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
ML CKPD WTMN+ L F GQ++MME YEKF++ GI+P RTFNIL+ +YGK
Sbjct: 270 IQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGK 329
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
Y KMS+VMEYM+K + WT TYN VI+AF GD K MEY F M +E + T
Sbjct: 330 SGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIIPSCVT 389
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
C L+ Y AG K+ +R I ++ F+N ++ A + + EM+ V + M+
Sbjct: 390 LCSLVRAYGRAGKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELME 449
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+K +PD T+ M +AY GM V L
Sbjct: 450 KKGFKPDKITYRTMVKAYRISGMTTHVKEL 479
>gi|9758872|dbj|BAB09426.1| unnamed protein product [Arabidopsis thaliana]
Length = 495
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 164/413 (39%), Positives = 236/413 (57%), Gaps = 20/413 (4%)
Query: 87 KRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGT 146
+R K++ +K +K K TV E+ + + +W A+QVFE+L+EQ +Y+P G
Sbjct: 95 RREATKSIIEK--KKGSKKLLPRTVLESLHERITALRWESAIQVFELLREQLWYKPNVGI 152
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y+KL+V+LGK QPE A ++F EM+ EG E+YTAL++AY R+ D AF L +MK
Sbjct: 153 YVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMK 212
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
+ NCQPDV+TYS LIK+ + F+ ++ L DM + + PNT+T F
Sbjct: 213 SSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTIT-------------F 259
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
+ME L ML CKPD WTMN+ L F GQ++MME YEKF++ GI+P RTFNI
Sbjct: 260 VEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNI 319
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
L+ +YGK Y KMS+VMEYM+K + WT TYN VI+AF GD K MEY F M +E
Sbjct: 320 LLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSER 379
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+ T C L+ Y A K+ +R I ++ F+N ++ A + + EM+
Sbjct: 380 IFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMK 439
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGHWQ 499
V + M++K +PD T+ M +AY GM V ++L ++E+ G Q
Sbjct: 440 GVLELMEKKGFKPDKITYRTMVKAYRISGMTTHV-----KELHGVVESVGEAQ 487
>gi|302816774|ref|XP_002990065.1| hypothetical protein SELMODRAFT_130980 [Selaginella moellendorffii]
gi|300142185|gb|EFJ08888.1| hypothetical protein SELMODRAFT_130980 [Selaginella moellendorffii]
Length = 458
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 147/401 (36%), Positives = 238/401 (59%), Gaps = 5/401 (1%)
Query: 93 NLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLV 152
+L+K + RKA +K +++ + SD + + QW AL+VFE+L+ Q +YQP GTY++LL
Sbjct: 7 SLRKSMARKA-SKLLPSSLLDILSDRIQRGQWEAALKVFELLRSQQWYQPYAGTYIRLLE 65
Query: 153 LLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQ 212
+LGK +P+ A +F M+ +G P+ E +TAL++AY R++L+ A L M P+C
Sbjct: 66 MLGKCKRPDEAASLFQTMLADGCGPSREAFTALMSAYTRSNLMSTAMEVLQAMNATPHCS 125
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
PDV+TYS LIK+C D + L DM R + PN VT NI+L Y K+G D++ +
Sbjct: 126 PDVFTYSLLIKSCCDCGQLSRASDLLADMTARGIQPNRVTYNIILDAYAKSGSLDKLHDL 185
Query: 273 LSGMLE--SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
ML+ S +C+PD W+ N I+ F N+G + ME W+++ P++ T + L+ A
Sbjct: 186 ALQMLQSPSPSCRPDHWSRNAIVKGFGNRGDIRRMEEWFQRLTTPSDGPDSLTLHSLMAA 245
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
Y K M+DKM +V+ Y+ + + + TYN +I A+ G M TF M G++ D
Sbjct: 246 YAKAEMFDKMHAVVRYIHRYHYQVDAVTYNILINAYGRAGRKTQMLKTFTSMKCGGVRPD 305
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
+ T+C LIN Y G+ K+ + S ++ + + YN+V+ A +A D+ ++R +
Sbjct: 306 SVTYCTLINFYGKFGMQRKLPRLLEQMSMHKVQPDTALYNSVLDAYRRASDISSIDRYFA 365
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDK--VYALEQEKLQ 489
M+E+ C+PD T++I+ +AY +G+ DK V A+EQEKL+
Sbjct: 366 AMQEQGCKPDHLTYNILIQAYRSQGLTDKADVMAVEQEKLK 406
>gi|297820044|ref|XP_002877905.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323743|gb|EFH54164.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 439
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 157/408 (38%), Positives = 248/408 (60%), Gaps = 21/408 (5%)
Query: 96 KKLERKAKAKA----WVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLL 151
K +ERKA ++ W V E + + + +W AL++F +L++Q +Y+PK TY KL
Sbjct: 42 KGIERKANSEKYLTLWPKAVLEALDEAIKENRWQSALKIFHLLRKQHWYEPKCKTYTKLF 101
Query: 152 VLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNC 211
+LG QP+ A +F M+ EG++PT ++YT+L+A Y ++ L+D+AF TL MK++ +C
Sbjct: 102 KVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLIAVYGKSELLDKAFSTLEYMKSVSDC 161
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
+PDV+T++ LI+ C RF+L++ + +M V +TVT N ++ GYGKAGMF++ME
Sbjct: 162 KPDVFTFTVLIRCCCKLGRFDLVKRIILEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMEN 221
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
VL+ M+E PDV+T+N+I+ G +M+ + G P+ TFNILI ++
Sbjct: 222 VLADMIEDGDSLPDVFTLNSII------GSSEMVAHEED-----GELPDITTFNILILSF 270
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
GK MY KMSSVM++M K F T+ TYN VIE F G + M+ F +M +G+K ++
Sbjct: 271 GKAGMYKKMSSVMDFMEKRFFSLTTVTYNIVIETFGKAGKIEKMDDVFRKMKYQGVKPNS 330
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
++C L+N Y+ AGL K+ S +R + + F+N +I+A +A DL M+ +Y +
Sbjct: 331 ISYCSLVNAYSKAGLVGKIDSILRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQ 390
Query: 452 MKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ------EKLQMLLE 493
M+E+ C+PD TF+ M + Y G+ D V LE+ E L +LLE
Sbjct: 391 MEERKCKPDKITFATMIKTYKAHGIFDAVQELEKQMISTGENLDILLE 438
>gi|302810470|ref|XP_002986926.1| hypothetical protein SELMODRAFT_125134 [Selaginella moellendorffii]
gi|300145331|gb|EFJ12008.1| hypothetical protein SELMODRAFT_125134 [Selaginella moellendorffii]
Length = 458
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 237/401 (59%), Gaps = 5/401 (1%)
Query: 93 NLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLV 152
+L+K + RKA +K +++ + SD + + QW AL+VFE+L+ Q +YQP GTY+++L
Sbjct: 7 SLRKSMARKA-SKLLPSSLLDILSDRIQRGQWEAALKVFELLRSQQWYQPYAGTYIRMLE 65
Query: 153 LLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQ 212
+LGK +P+ A +F M+ +G P+ E +TAL++AY R++L+ A L M P+C
Sbjct: 66 MLGKCKRPDEAASLFQTMLADGCGPSREAFTALMSAYTRSNLMSTAMEVLQAMNATPHCS 125
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
PDV+TYS LIK+C D + L DM R + PN VT NI+L Y K G D++ +
Sbjct: 126 PDVFTYSLLIKSCCDCGQLSRAADLLADMTARGIQPNRVTYNIILDAYAKCGSLDKLHDL 185
Query: 273 LSGMLE--SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
ML+ S +C+PD W+ N I+ F N+G + ME W+++ P++ T + L+ A
Sbjct: 186 ALQMLQSPSPSCRPDHWSRNAIVKGFGNRGDIRRMEEWFQRLTTPSDGPDSLTLHSLMAA 245
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
Y K M+DKM +V+ Y+ + + + TYN +I A+ G M TF M G++ D
Sbjct: 246 YAKAEMFDKMHAVVRYIHRYHYQVDAVTYNILINAYGRAGRKTQMLKTFTSMKCGGVRPD 305
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
+ T+C LIN Y G+ K+ + S ++ + + YN+V+ A +A D+ ++R +
Sbjct: 306 SVTYCTLINFYGKFGMQRKLPRLLEQMSMHKVQPDTALYNSVLDAYRRASDISSIDRYFA 365
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDK--VYALEQEKLQ 489
M+E+ C+PD T++I+ +AY +G+ DK V A+EQEKL+
Sbjct: 366 AMQEQGCKPDHLTYNILIQAYRSQGLTDKADVMAVEQEKLK 406
>gi|168016406|ref|XP_001760740.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688100|gb|EDQ74479.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 466
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 130/392 (33%), Positives = 223/392 (56%), Gaps = 6/392 (1%)
Query: 99 ERKAKAKA----WVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLL 154
ER+A AK + + E+ + + +W AL+VFE+++ Q +Y + TY+KLL +L
Sbjct: 71 ERRALAKGSKRLYPRALLESLDVRIKQNEWESALRVFELVRIQEWYTAEVSTYVKLLTML 130
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
+ QP+ A +F+ ++++ + PT E++TAL+ + +++L+ +AF QM+ C PD
Sbjct: 131 ARVKQPQAASNLFDFLLQDKLRPTLEIFTALITVFTKSNLLKKAFEVFEQMRLFDGCLPD 190
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
Y Y+T+IK C DA ++ + L+ +M V P VT N ++ GYGKAG+F ++E +LS
Sbjct: 191 KYAYTTMIKGCCDAGLYDQAKKLFNEMMREGVEPTIVTYNTLIFGYGKAGLFAEIEYLLS 250
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
++E+ PD T NT++ VF ++ ME+ YE G+ + T N LIG YG+
Sbjct: 251 -LMEANGITPDTITWNTLIRVFGLHNRIPEMEQAYEGLLAQGLMADEVTLNSLIGTYGRA 309
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
+Y KM V ++MR+ +P T+ TYN +IE + + M+ F++M A+G+K + TF
Sbjct: 310 GLYGKMECVTDFMRRYSYPMTTVTYNIIIEIYGKARKIEQMDTAFKRMKAQGLKPNCITF 369
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
+++ Y G +HK+ +R A + + YNA I A +A D ME++++ MK
Sbjct: 370 SSILSAYGKHGEWHKIEKIMRQVRHYN-AADTAVYNAAIDAHRRALDFEAMEKLFEEMKM 428
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ PD T++ + EAY + K L++E
Sbjct: 429 EGVAPDGITYTTLIEAYGRVRKLQKARELQEE 460
>gi|168045050|ref|XP_001774992.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673739|gb|EDQ60258.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 385
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 130/358 (36%), Positives = 206/358 (57%), Gaps = 2/358 (0%)
Query: 129 QVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAA 188
QVFE+++ Q +Y TY+KLL +L K+ Q A VF+ ++E+ + PT ++TALL
Sbjct: 19 QVFELVRAQEWYTADLSTYLKLLTMLAKAKQAAEASNVFDCLLEDKLRPTTAIFTALLTV 78
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP 248
+ +++ +A M+ C PD YTY+ +IK C +A + ++ +M V P
Sbjct: 79 FTQSNQFKKALEIFESMRLYEGCVPDKYTYTAMIKGCCEAGLYVQARKIFDEMMIEGVKP 138
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW 308
+ VT NI++ GYGKAG+F ++ERVLS M E+ PD T NT++ VF ++ ME+
Sbjct: 139 SIVTYNILIHGYGKAGLFREVERVLSTM-EANNVAPDTVTWNTLIRVFGLNCKIPEMEQA 197
Query: 309 YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD 368
YE G+ P+ T N LI AYG +++KM SV +YM++ +P T TYN ++EA+
Sbjct: 198 YEGLLRQGLQPDMVTLNSLISAYGTAGLFEKMESVTQYMQRYNYPMTRITYNIIMEAYGR 257
Query: 369 MGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSF 428
G ME T+++M AE +K ++ TFC +++ Y G +H V +R A A + +
Sbjct: 258 AGMVDQMEETWKRMKAEFVKPNSSTFCSMLSAYGRHGYWHNVEKVMRQARYFD-AADTAV 316
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
YNA I A +A + +ME++++ MK K PD T+SI+ AY + DK L++E
Sbjct: 317 YNAAIDAFQRAQNFEDMEKIFEEMKLKGHAPDDVTYSILIGAYERIRRVDKARDLQEE 374
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 138/279 (49%), Gaps = 3/279 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
Q+ +AL++FE ++ P + TY ++ ++G ARK+F+EM+ EG++P+ Y
Sbjct: 84 QFKKALEIFESMRLYEGCVPDKYTYTAMIKGCCEAGLYVQARKIFDEMMIEGVKPSIVTY 143
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
L+ Y + L E L+ M+ N PD T++TLI+ + +E Y+ +
Sbjct: 144 NILIHGYGKAGLFREVERVLSTMEA-NNVAPDTVTWNTLIRVFGLNCKIPEMEQAYEGLL 202
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
+ + P+ VT N ++ YG AG+F++ME V M + T N I+ + G V
Sbjct: 203 RQGLQPDMVTLNSLISAYGTAGLFEKMESVTQYMQRYNYPMTRI-TYNIIMEAYGRAGMV 261
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
D ME +++ + + P + TF ++ AYG+ + + VM R ++ YN
Sbjct: 262 DQMEETWKRMKAEFVKPNSSTFCSMLSAYGRHGYWHNVEKVMRQARYFDAA-DTAVYNAA 320
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
I+AF + + ME FE+M +G D T+ LI Y
Sbjct: 321 IDAFQRAQNFEDMEKIFEEMKLKGHAPDDVTYSILIGAY 359
>gi|242057231|ref|XP_002457761.1| hypothetical protein SORBIDRAFT_03g013016 [Sorghum bicolor]
gi|241929736|gb|EES02881.1| hypothetical protein SORBIDRAFT_03g013016 [Sorghum bicolor]
Length = 267
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/249 (39%), Positives = 151/249 (60%), Gaps = 10/249 (4%)
Query: 95 KKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLL 154
K R+ W V E V +W AL++FE+L++Q +Y+P+ TY +LL++L
Sbjct: 25 KAAAARQQSTNLWPRVVLEALDSTVAACRWESALEIFELLRKQHWYEPRSQTYARLLMML 84
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
GK QP A +F M+ E + PT ++YTAL+ AY + +DEA + QMK +C+PD
Sbjct: 85 GKCRQPGPAAALFKAMLSERLRPTADVYTALVGAYGYSGFLDEALAAVEQMKGAADCKPD 144
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
YT+S+ RF+LI + +M + N+V N ++ GYGKA MF++ME LS
Sbjct: 145 GYTFSS--------RRFDLIPAVLDEMSYLGIECNSVIHNAIIDGYGKAAMFEEMEGALS 196
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
MLES + PD++TMN+++ + N G+ D ME+ Y +F+ G++P+T+TFN I +YGK
Sbjct: 197 AMLESGSNVPDIYTMNSVIGAYGNHGRTDEMEKSYSEFQLMGVEPDTKTFN--IKSYGKA 254
Query: 335 RMYDKMSSV 343
MYDKM S+
Sbjct: 255 GMYDKMMSI 263
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 13/207 (6%)
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
+P TY+ L+ + L++ M + P ++G YG +G D+
Sbjct: 71 EPRSQTYARLLMMLGKCRQPGPAAALFKAMLSERLRPTADVYTALVGAYGYSGFLDEALA 130
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+ M +A CKPD +T F+++ + D++ ++ GI+ + N +I Y
Sbjct: 131 AVEQMKGAADCKPDGYT-------FSSR-RFDLIPAVLDEMSYLGIECNSVIHNAIIDGY 182
Query: 332 GKKRMYDKMSSVMEYMRKL--QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
GK M+++M + M + P T N+VI A+ + G ME ++ + G++
Sbjct: 183 GKAAMFEEMEGALSAMLESGSNVP-DIYTMNSVIGAYGNHGRTDEMEKSYSEFQLMGVEP 241
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRL 416
DTKTF I Y AG++ K++S L
Sbjct: 242 DTKTFN--IKSYGKAGMYDKMMSIFSL 266
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 90/209 (43%), Gaps = 43/209 (20%)
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ WYE P ++T+ L+ GK R +++ + M + T+ Y ++ A
Sbjct: 67 QHWYE--------PRSQTYARLLMMLGKCRQPGPAAALFKAMLSERLRPTADVYTALVGA 118
Query: 366 FSDMG----------------DAKHMEYTF------------EQMHAEGMKADTKTFCCL 397
+ G D K YTF ++M G++ ++ +
Sbjct: 119 YGYSGFLDEALAAVEQMKGAADCKPDGYTFSSRRFDLIPAVLDEMSYLGIECNSVIHNAI 178
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENV-SFY--NAVISACIKADDLMEMERVYKRMKE 454
I+GY A +F ++ + L++ L+ NV Y N+VI A EME+ Y +
Sbjct: 179 IDGYGKAAMFEEMEGA--LSAMLESGSNVPDIYTMNSVIGAYGNHGRTDEMEKSYSEFQL 236
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
PD++TF+I ++Y K GM DK+ ++
Sbjct: 237 MGVEPDTKTFNI--KSYGKAGMYDKMMSI 263
>gi|357138098|ref|XP_003570635.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Brachypodium distachyon]
Length = 519
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 181/353 (51%), Gaps = 5/353 (1%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
W Q L++F +++Q +Y G Y KL+ ++GK GQ +A +F++M G +P +Y
Sbjct: 92 WVQCLEIFRWMQKQRWYVADNGIYSKLISVMGKKGQIRMAMWLFSQMRNSGCKPDTSVYN 151
Query: 184 ALLAAYC----RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+L+ A+ ++ + +A ++MKT+ CQP++ TY+ L++AC A + +E L++
Sbjct: 152 SLIGAHLHSRDKSKALAKALGYFDKMKTIERCQPNIVTYNILLRACARASDAKQVEILFK 211
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
D+DE VTP+ T N V+ GYGK GM +ME VL M +S C+PDV T N ++ + K
Sbjct: 212 DLDESLVTPDIYTYNGVIDGYGKNGMIKEMESVLVRM-KSKQCRPDVITFNILIDSYGRK 270
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
D ME+ ++ P TFN +I YGK R+ +K SV+E M +L F + T
Sbjct: 271 QIFDKMEQVFKSLLRSKERPTHPTFNSMITNYGKARLKEKAESVLEKMDELGFKPSYVTQ 330
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+I ++ + F+++ + +++ Y L + + A +
Sbjct: 331 ECLIMMYAYCDCVSKAQQIFDELVNSQSTVPLSSLNAMLDAYCMNRLPMEADRLLDAAIE 390
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
+ S Y + A +A+D + ++++ RM ++ P+ + F EA+
Sbjct: 391 KGVVPGASTYKLLYKAYTRANDKVLVQKLLGRMNKQGIVPNKKFFLDALEAFG 443
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 95/194 (48%), Gaps = 7/194 (3%)
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK-MSSVMEYMRKL 350
++SV KGQ+ M + + RN G P+T +N LIGA+ R K ++ + Y K+
Sbjct: 118 LISVMGKKGQIRMAMWLFSQMRNSGCKPDTSVYNSLIGAHLHSRDKSKALAKALGYFDKM 177
Query: 351 QFPWTSS----TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
+ TYN ++ A + DAK +E F+ + + D T+ +I+GY G+
Sbjct: 178 KTIERCQPNIVTYNILLRACARASDAKQVEILFKDLDESLVTPDIYTYNGVIDGYGKNGM 237
Query: 407 FHKVISS-VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
++ S VR+ SK Q +V +N +I + + +ME+V+K + RP TF+
Sbjct: 238 IKEMESVLVRMKSK-QCRPDVITFNILIDSYGRKQIFDKMEQVFKSLLRSKERPTHPTFN 296
Query: 466 IMTEAYAKEGMNDK 479
M Y K + +K
Sbjct: 297 SMITNYGKARLKEK 310
>gi|326522967|dbj|BAJ88529.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 539
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 182/353 (51%), Gaps = 5/353 (1%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
W Q L++F +++Q +Y G Y KL+ ++G+ GQ +A +F++M G +P +Y
Sbjct: 102 WVQCLEIFRWMQKQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNSGCKPDTSVYN 161
Query: 184 ALLAAYCRNSLIDEAFVT----LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+L+ A+ + +A V ++MK + CQP++ TY+ L++AC A + ++ L++
Sbjct: 162 SLIGAHLHSRDKSKALVKALGYFDKMKGMERCQPNIVTYNILLRACARASDTKQVDILFK 221
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
D+DE V+P+ T N V+ GYGK GM +ME VL M +S C+PDV T N ++ + K
Sbjct: 222 DLDESIVSPDIYTYNGVIDGYGKNGMITEMESVLVRM-KSKQCRPDVITFNILIDSYGRK 280
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
D ME+ ++ P TFN +I YGK R+ +K SV+E M++L F T
Sbjct: 281 QTFDKMEQVFKSLLRSKERPTHPTFNSMITNYGKARLREKAESVIEKMQELGFKPNYVTQ 340
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+I ++ + F+++ + + +++ Y L + + A +
Sbjct: 341 ECLINMYAYCDCVSKAQQIFDELVSSQSTVPLSSLNAMLDAYCMNRLPMEADRLLDTAIE 400
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
+ + S Y + A +A+D M ++++ +RM ++ P+ + F EA+
Sbjct: 401 KGVVPSASTYKLLYRAYTRANDKMLVQKLLQRMNKQGIVPNKKFFLDALEAFG 453
>gi|334187332|ref|NP_001190970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332661695|gb|AEE87095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 190/401 (47%), Gaps = 14/401 (3%)
Query: 85 RSKRTPIKNLKKKL-ERKAKAKAWVNTVAETFSDHVL--------KKQWFQALQVFEMLK 135
R R +++L ++ +R+ K V DH +W Q L+VF ++
Sbjct: 65 RENRVLVRSLMSRISDREPLVKTLDKYVKVVRCDHCFLLFEELGKSDKWLQCLEVFRWMQ 124
Query: 136 EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYC----R 191
+Q +Y P G Y KL+ ++GK GQ +A +F+EM G P +Y AL+ A+ +
Sbjct: 125 KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDK 184
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
+++ L++MK + CQP+V TY+ L++A + + + + L++D+D V+P+
Sbjct: 185 AKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVY 244
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
T N V+ YGK GM +ME VL+ M S CKPD+ T N ++ + K + + ME+ ++
Sbjct: 245 TFNGVMDAYGKNGMIKEMEAVLTRM-RSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKS 303
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
P TFN +I YGK RM DK V + M + + + TY +I + G
Sbjct: 304 LMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGS 363
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNA 431
FE++ T ++ Y GL+ + AS ++ + S Y
Sbjct: 364 VSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKF 423
Query: 432 VISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
+ A KAD +++ + K+M++ P+ F E +
Sbjct: 424 LYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFG 464
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 125/310 (40%), Gaps = 39/310 (12%)
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY----GKAGMFDQ 268
PD YS LI + + L+ +M P+ N ++ + KA ++
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
+ L M C+P+V T N +L FA G+VD + ++ + P+ TFN ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
AYGK M +M +V+ MR + T+N +I+++ + + ME TF+ + K
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 389 ADTKTFCCLINGYANAGLFHKV----------------------------ISSVRLASKL 420
TF +I Y A + K SV A ++
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREI 370
Query: 421 --QIAEN-----VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
++ E+ S NA++ + +E ++++ PD+ T+ + +AY K
Sbjct: 371 FEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTK 430
Query: 474 EGMNDKVYAL 483
M ++V L
Sbjct: 431 ADMKEQVQIL 440
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 99/224 (44%), Gaps = 5/224 (2%)
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
GK+ + Q V M + PD + ++SV KGQ M + + +N G P+
Sbjct: 108 GKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPD 167
Query: 321 TRTFNILIGAY----GKKRMYDKMSSVMEYMRKLQFPWTSS-TYNNVIEAFSDMGDAKHM 375
+N LI A+ K + +K+ ++ M+ ++ + TYN ++ AF+ G +
Sbjct: 168 ASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQV 227
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
F+ + + D TF +++ Y G+ ++ + + + ++ +N +I +
Sbjct: 228 NALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDS 287
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
K + +ME+ +K + +P TF+ M Y K M DK
Sbjct: 288 YGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDK 331
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 68/157 (43%), Gaps = 6/157 (3%)
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQ-FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
+L GK + + V +M+K + + + Y+ +I G + + F +M
Sbjct: 102 LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN 161
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVR-LASKLQIAE----NVSFYNAVISACIKA 439
G + D + LI + + K + VR K++ E NV YN ++ A ++
Sbjct: 162 SGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQS 221
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ ++ ++K + PD TF+ + +AY K GM
Sbjct: 222 GKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGM 258
>gi|15235161|ref|NP_195672.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75266408|sp|Q9SV96.1|PP358_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g39620, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2453; Flags: Precursor
gi|5042178|emb|CAB44697.1| putative protein [Arabidopsis thaliana]
gi|7270946|emb|CAB80625.1| putative protein [Arabidopsis thaliana]
gi|58013022|gb|AAW62964.1| chloroplast embryo-defective 2453 [Arabidopsis thaliana]
gi|332661694|gb|AEE87094.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 563
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 175/354 (49%), Gaps = 5/354 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W Q L+VF +++Q +Y P G Y KL+ ++GK GQ +A +F+EM G P +Y
Sbjct: 112 KWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVY 171
Query: 183 TALLAAYC----RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
AL+ A+ + +++ L++MK + CQP+V TY+ L++A + + + + L+
Sbjct: 172 NALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALF 231
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
+D+D V+P+ T N V+ YGK GM +ME VL+ M S CKPD+ T N ++ +
Sbjct: 232 KDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM-RSNECKPDIITFNVLIDSYGK 290
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
K + + ME+ ++ P TFN +I YGK RM DK V + M + + + T
Sbjct: 291 KQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFIT 350
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
Y +I + G FE++ T ++ Y GL+ + AS
Sbjct: 351 YECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNAS 410
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
++ + S Y + A KAD +++ + K+M++ P+ F E +
Sbjct: 411 AFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFG 464
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 125/310 (40%), Gaps = 39/310 (12%)
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY----GKAGMFDQ 268
PD YS LI + + L+ +M P+ N ++ + KA ++
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
+ L M C+P+V T N +L FA G+VD + ++ + P+ TFN ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
AYGK M +M +V+ MR + T+N +I+++ + + ME TF+ + K
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 389 ADTKTFCCLINGYANAGLFHKV----------------------------ISSVRLASKL 420
TF +I Y A + K SV A ++
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREI 370
Query: 421 --QIAEN-----VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
++ E+ S NA++ + +E ++++ PD+ T+ + +AY K
Sbjct: 371 FEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTK 430
Query: 474 EGMNDKVYAL 483
M ++V L
Sbjct: 431 ADMKEQVQIL 440
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 99/224 (44%), Gaps = 5/224 (2%)
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
GK+ + Q V M + PD + ++SV KGQ M + + +N G P+
Sbjct: 108 GKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPD 167
Query: 321 TRTFNILIGAY----GKKRMYDKMSSVMEYMRKLQFPWTSS-TYNNVIEAFSDMGDAKHM 375
+N LI A+ K + +K+ ++ M+ ++ + TYN ++ AF+ G +
Sbjct: 168 ASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQV 227
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
F+ + + D TF +++ Y G+ ++ + + + ++ +N +I +
Sbjct: 228 NALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDS 287
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
K + +ME+ +K + +P TF+ M Y K M DK
Sbjct: 288 YGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDK 331
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 68/157 (43%), Gaps = 6/157 (3%)
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQ-FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
+L GK + + V +M+K + + + Y+ +I G + + F +M
Sbjct: 102 LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN 161
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVR-LASKLQIAE----NVSFYNAVISACIKA 439
G + D + LI + + K + VR K++ E NV YN ++ A ++
Sbjct: 162 SGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQS 221
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ ++ ++K + PD TF+ + +AY K GM
Sbjct: 222 GKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGM 258
>gi|162460162|ref|NP_001106062.1| pentatricopeptide repeat 5 [Zea mays]
gi|154520281|gb|ABS82814.1| pentatricopeptide repeat protein 5 [Zea mays]
gi|413924537|gb|AFW64469.1| pentatricopeptide repeat 5 [Zea mays]
Length = 499
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 180/363 (49%), Gaps = 8/363 (2%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+ W Q L VF +++Q +Y G Y KL+ ++G+ GQ +A +F++M G +P
Sbjct: 101 RDAWLQCLDVFRWMQKQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNSGCKPDTS 160
Query: 181 LYTALLAAYC----RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
+Y +L+ A+ + + +A +MK + CQP + TY+ L++A A + ++
Sbjct: 161 VYNSLIGAHLHSRDKTKALAKALGYFEKMKCIERCQPTIVTYNILLRAFAQAGDTKQVDM 220
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
L++D+DE V+P+ T N VL YGK GM +ME VL M +S C+PDV T N ++ +
Sbjct: 221 LFKDLDESVVSPDVYTYNGVLDAYGKNGMIKEMESVLVRM-KSTQCRPDVITFNILIDSY 279
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
K D ME+ ++ P TFN +I YG+ R+ +K SV+E M +L F
Sbjct: 280 GRKQTFDKMEQVFKSLLRSKERPTHPTFNSMITNYGRARLREKAESVVEKMEELGFKPNY 339
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
T +I ++ F+++ K + ++ Y GL + +
Sbjct: 340 VTQECLIIMYAHCDCVSKARQVFDELVTSQTKVHLSSLNSMLEAYCMNGLHTEADRLLDT 399
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
A + + N S Y + A KA+D + ++++ KRM ++ P+ + F EA+ G
Sbjct: 400 ALQQCVVPNGSTYKLLYKAYTKANDKLLVQKLLKRMNKQGIVPNKKFFLDALEAF---GT 456
Query: 477 NDK 479
+D+
Sbjct: 457 SDR 459
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 169/356 (47%), Gaps = 13/356 (3%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A QVFE +K F K TY LL + GKS +P+ A KV NEMV G P+ Y +L
Sbjct: 297 EAAQVFEEMKAAGFSYDKV-TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
++AY R+ ++DEA NQM +PDV+TY+TL+ A + E +++++M
Sbjct: 356 ISAYARDGMLDEAMELKNQMAE-KGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 414
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC--KPDVWTMNTILSVFANKGQVD 303
PN T N + YG G F +M ++ E C PD+ T NT+L+VF G
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFTEMMKIFD---EINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ +++ + G PE TFN LI AY + +++ +V M STYN V+
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA---GLFHKVISSVRLASKL 420
A + G + E +M K + T+C L++ YAN GL H + V
Sbjct: 532 AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV-- 589
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
I ++ C K D L E ER + +KE+ PD T + M Y + M
Sbjct: 590 -IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQM 644
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 171/372 (45%), Gaps = 4/372 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQP-ELARKVFNEMVEEGIEPTPEL 181
++ +A+ VF+ ++E +P TY +L + GK G P + +M +GI P
Sbjct: 223 RYREAVNVFKKMEEDGC-KPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYT 281
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y L+ R SL EA +MK D TY+ L+ + R + + +M
Sbjct: 282 YNTLITCCKRGSLHQEAAQVFEEMKA-AGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM 340
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+P+ VT N ++ Y + GM D+ + + M E T KPDV+T T+LS F G+
Sbjct: 341 VLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGT-KPDVFTYTTLLSGFERAGK 399
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
V+ +E+ RN G P TFN I YG + + +M + + + T+N
Sbjct: 400 VESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNT 459
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
++ F G + F++M G + +TF LI+ Y+ G F + ++ R
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
+ ++S YN V++A + + E+V M++ C+P+ T+ + AYA ++
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMH 579
Query: 482 ALEQEKLQMLLE 493
+L +E ++E
Sbjct: 580 SLAEEVYSGVIE 591
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 176/391 (45%), Gaps = 44/391 (11%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A+ +FE ++ +P T+ + + G G+ K+F+E+ G+ P + LL
Sbjct: 403 AMSIFEEMRNAGC-KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL 461
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
A + +N + E +MK P+ T++TLI A FE T+Y+ M + V
Sbjct: 462 AVFGQNGMDSEVSGVFKEMKR-AGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGV 520
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM- 305
TP+ T N VL + GM++Q E+VL+ M E CKP+ T ++L +AN ++ +M
Sbjct: 521 TPDLSTYNTVLAALARGGMWEQSEKVLAEM-EDGRCKPNELTYCSLLHAYANGKEIGLMH 579
Query: 306 ----------------------------------ERWYEKFRNFGIDPETRTFNILIGAY 331
ER + + + G P+ T N ++ Y
Sbjct: 580 SLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIY 639
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
G+++M K + V++YM++ F + +TYN+++ S D E ++ A+G+K D
Sbjct: 640 GRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDI 699
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDLMEMERV 448
++ +I Y ++ + R+ S+++ I +V YN I + E V
Sbjct: 700 ISYNTVIYAYCRN---TRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGV 756
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ M + CRP+ T++ + + Y K D+
Sbjct: 757 VRYMIKHGCRPNQNTYNSIVDGYCKLNRKDE 787
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 155/368 (42%), Gaps = 40/368 (10%)
Query: 122 KQWFQALQVFEMLKEQPFYQP--KEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
K++ AL+ F+ +Q YQ ++ +LGK G+ A +FN + E+G
Sbjct: 149 KKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGF---- 204
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
SL DVY+Y++LI A ++ R+ +++
Sbjct: 205 -------------SL-------------------DVYSYTSLISAFANSGRYREAVNVFK 232
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGM-FDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
M+E P +T N++L +GK G ++++ ++ M +S PD +T NT+++
Sbjct: 233 KMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKM-KSDGIAPDAYTYNTLITCCKR 291
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
+ +E+ + G + T+N L+ YGK + V+ M F + T
Sbjct: 292 GSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVT 351
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN++I A++ G QM +G K D T+ L++G+ AG +S
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
N+ +NA I EM +++ + PD T++ + + + GM+
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 479 KVYALEQE 486
+V + +E
Sbjct: 472 EVSGVFKE 479
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 2/161 (1%)
Query: 108 VNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
+ T+ S + ++ +A V + +KE+ F P TY L+ + +S + ++
Sbjct: 629 ITTLNSMVSIYGRRQMVAKANGVLDYMKERGF-TPSMATYNSLMYMHSRSADFGKSEEIL 687
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
E++ +GI+P Y ++ AYCRN+ + +A ++M+ PDV TY+T I +
Sbjct: 688 REILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRN-SGIVPDVITYNTFIGSYAA 746
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
FE + + M + PN T N ++ GY K D+
Sbjct: 747 DSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDE 787
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 99/217 (45%), Gaps = 10/217 (4%)
Query: 266 FD--QMERVLSGMLESATCKPDVWTMNTILSVFANKG---QVDMMER---WYEKFRNFGI 317
FD Q++ VLS + E KP+ T + +L+ G + D+ R W+ K +++
Sbjct: 111 FDSGQLDSVLSELFEPFKDKPES-TSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQS 169
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
+ I+I GK+ +++ +++ F +Y ++I AF++ G +
Sbjct: 170 MLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVN 229
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGL-FHKVISSVRLASKLQIAENVSFYNAVISAC 436
F++M +G K T+ ++N + G ++K+ S V IA + YN +I+ C
Sbjct: 230 VFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCC 289
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ E +V++ MK D T++ + + Y K
Sbjct: 290 KRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK 326
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/359 (31%), Positives = 167/359 (46%), Gaps = 13/359 (3%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A QVFE +K F K TY LL + GKS +P+ A KV NEM G P+ Y +L
Sbjct: 297 EAAQVFEEMKAAGFSHDKV-TYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSL 355
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
++AY R+ ++DEA NQM +PDV+TY+TL+ A + E ++++M
Sbjct: 356 ISAYARDGMLDEAMELKNQMAE-KGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAG 414
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC--KPDVWTMNTILSVFANKGQVD 303
PN T N + YG G F M ++ E C PD+ T NT+L+VF G
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFVDMMKIFD---EINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ +++ + G PE TFN LI AY + +++ +V M STYN V+
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA---GLFHKVISSVRLASKL 420
A + G + E +M K + T+C L++ YAN GL H + V
Sbjct: 532 AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV-- 589
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
I ++ C K D L E ER + +KE+ PD T + M Y + M K
Sbjct: 590 -IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGK 647
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 172/372 (46%), Gaps = 4/372 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQP-ELARKVFNEMVEEGIEPTPEL 181
++ +A+ VF+ ++E+ +P TY +L + GK G P + +M +GI P
Sbjct: 223 RYREAVNVFKKMEEEGC-KPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYT 281
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y L+ R SL EA +MK D TY+ L+ + R + + +M
Sbjct: 282 YNTLITCCKRGSLHQEAAQVFEEMKA-AGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEM 340
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ +P+ VT N ++ Y + GM D+ + + M E T KPDV+T T+LS F G+
Sbjct: 341 ELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGT-KPDVFTYTTLLSGFERAGK 399
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
V+ +E+ RN G P TFN I YG + + M + + + T+N
Sbjct: 400 VESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNT 459
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
++ F G + F++M G + +TF LI+ Y+ G F + ++ R
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
+ ++S YN V++A + + E+V M++ C+P+ T+ + AYA ++
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMH 579
Query: 482 ALEQEKLQMLLE 493
+L +E ++E
Sbjct: 580 SLAEEVYSGVIE 591
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 176/391 (45%), Gaps = 44/391 (11%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A+ +FE ++ +P T+ + + G G+ K+F+E+ G+ P + LL
Sbjct: 403 AMNIFEEMRNAGC-KPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLL 461
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
A + +N + E +MK P+ T++TLI A FE T+Y+ M + V
Sbjct: 462 AVFGQNGMDSEVSGVFKEMKR-AGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGV 520
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM- 305
TP+ T N VL + GM++Q E+VL+ M E CKP+ T ++L +AN ++ +M
Sbjct: 521 TPDLSTYNTVLAALARGGMWEQSEKVLAEM-EDGRCKPNELTYCSLLHAYANGKEIGLMH 579
Query: 306 ----------------------------------ERWYEKFRNFGIDPETRTFNILIGAY 331
ER + + + G P+ T N ++ Y
Sbjct: 580 SLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIY 639
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
G+++M K + V++YM++ F + +TYN+++ S D E ++ A+G+K D
Sbjct: 640 GRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDI 699
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDLMEMERV 448
++ +I Y ++ + R+ S+++ I +V YN I + E V
Sbjct: 700 ISYNTVIYAYCRN---TRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGV 756
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ M + CRP+ T++ + + Y K D+
Sbjct: 757 VRYMIKHGCRPNQNTYNSIVDGYCKLNRKDE 787
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 167/371 (45%), Gaps = 46/371 (12%)
Query: 122 KQWFQALQVFEMLKEQPFYQPK-EGTYMKLLV-LLGKSGQPELARKVFNEMVEEGIEPTP 179
K++ AL F+ +Q YQ + + + +++ +LGK G+ A +FN + E+G
Sbjct: 149 KKFDLALCAFDWFMKQKDYQSMLDNSVIAIVISMLGKEGRVSSAANLFNGLQEDGF---- 204
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
SL DVY+Y++LI A ++ R+ +++
Sbjct: 205 -------------SL-------------------DVYSYTSLISAFANSGRYREAVNVFK 232
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGM-FDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
M+E P +T N++L +GK G ++++ ++ M +S PD +T NT+++
Sbjct: 233 KMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKM-KSDGIAPDAYTYNTLITCCKR 291
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
+ +E+ + G + T+N L+ YGK + V+ M F + T
Sbjct: 292 GSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVT 351
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN++I A++ G QM +G K D T+ L++G+ AG KV S++ +
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAG---KVESAMNIFE 408
Query: 419 KLQIA---ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+++ A N+ +NA I ++M +++ + PD T++ + + + G
Sbjct: 409 EMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNG 468
Query: 476 MNDKVYALEQE 486
M+ +V + +E
Sbjct: 469 MDSEVSGVFKE 479
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 2/161 (1%)
Query: 108 VNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
+ T+ S + ++ +A +V + +KE+ F P TY L+ + +S + ++
Sbjct: 629 ITTLNSMVSIYGRRQMVGKANEVLDYMKERGF-TPSMATYNSLMYMHSRSADFGKSEEIL 687
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
E++ +GI+P Y ++ AYCRN+ + +A ++M+ PDV TY+T I +
Sbjct: 688 REILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRD-SGIVPDVITYNTFIGSYAA 746
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
FE + + M + PN T N ++ GY K D+
Sbjct: 747 DSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDE 787
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 96/213 (45%), Gaps = 8/213 (3%)
Query: 268 QMERVLSGMLESATCKPDVWTMNTILSVFANKG---QVDMME---RWYEKFRNFGIDPET 321
Q++ +LS + E KP+ T + +L+ G + D+ W+ K +++ +
Sbjct: 115 QLDALLSELFEPFKDKPES-TSSELLAFLKGLGFHKKFDLALCAFDWFMKQKDYQSMLDN 173
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
I+I GK+ +++ +++ F +Y ++I AF++ G + F++
Sbjct: 174 SVIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKK 233
Query: 382 MHAEGMKADTKTFCCLINGYANAGL-FHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
M EG K T+ ++N + G ++K+ S V IA + YN +I+ C +
Sbjct: 234 MEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGS 293
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
E +V++ MK D T++ + + Y K
Sbjct: 294 LHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGK 326
>gi|297797974|ref|XP_002866871.1| EMB2453 [Arabidopsis lyrata subsp. lyrata]
gi|297312707|gb|EFH43130.1| EMB2453 [Arabidopsis lyrata subsp. lyrata]
Length = 561
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 168/336 (50%), Gaps = 5/336 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W Q L+VF +++Q +Y P G Y KL+ ++GK GQ +A +F+EM G P +Y
Sbjct: 112 KWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVY 171
Query: 183 TALLAAYC----RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
AL+ A+ + +++ ++MK + CQP+V TY+ L++A + + + + L+
Sbjct: 172 NALITAHLHTRDKAKALEKVRGYFDKMKGMERCQPNVVTYNILLRAFAQSGKVDQVNALF 231
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
+D+D V+P+ T N V+ YGK GM +ME VL+ M S CKPD+ T N ++ +
Sbjct: 232 KDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM-RSNECKPDIITFNVLIDSYGK 290
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
K + + ME+ ++ P TFN +I YGK RM DK V + M + + + T
Sbjct: 291 KQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYMPSFIT 350
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
Y +I + G FE++ T ++ Y GL+ + AS
Sbjct: 351 YECMIMMYGYCGSVSRAREIFEEVVDSERVLKASTLNAMLEVYCRNGLYMEADKLFHNAS 410
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
++ + S Y + A KAD ++ + K+M++
Sbjct: 411 AFRVHPDASTYKFLYKAYTKADMKEHVQILMKKMEK 446
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 98/224 (43%), Gaps = 5/224 (2%)
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
GK+ + Q V M + PD + ++SV KGQ M + + +N G P+
Sbjct: 108 GKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPD 167
Query: 321 TRTFNILIGAY----GKKRMYDKMSSVMEYMRKLQFPWTSS-TYNNVIEAFSDMGDAKHM 375
+N LI A+ K + +K+ + M+ ++ + TYN ++ AF+ G +
Sbjct: 168 ASVYNALITAHLHTRDKAKALEKVRGYFDKMKGMERCQPNVVTYNILLRAFAQSGKVDQV 227
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
F+ + + D TF +++ Y G+ ++ + + + ++ +N +I +
Sbjct: 228 NALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDS 287
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
K + +ME+ +K + +P TF+ M Y K M DK
Sbjct: 288 YGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDK 331
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 66/157 (42%), Gaps = 6/157 (3%)
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQ-FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
+L GK + + V +M+K + + + Y+ +I G + + F +M
Sbjct: 102 LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN 161
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVR-----LASKLQIAENVSFYNAVISACIKA 439
G + D + LI + + K + VR + + NV YN ++ A ++
Sbjct: 162 SGCRPDASVYNALITAHLHTRDKAKALEKVRGYFDKMKGMERCQPNVVTYNILLRAFAQS 221
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ ++ ++K + PD TF+ + +AY K GM
Sbjct: 222 GKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGM 258
>gi|242065966|ref|XP_002454272.1| hypothetical protein SORBIDRAFT_04g027800 [Sorghum bicolor]
gi|241934103|gb|EES07248.1| hypothetical protein SORBIDRAFT_04g027800 [Sorghum bicolor]
Length = 519
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 181/362 (50%), Gaps = 5/362 (1%)
Query: 115 FSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG 174
F + + W Q L+VF +++Q +Y G Y KL+ ++G+ GQ +A +F++M G
Sbjct: 94 FEELGRRDAWLQCLEVFRWMQKQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNSG 153
Query: 175 IEPTPELYTALLAAYC----RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMR 230
+P +Y +L+ A+ ++ + +A +MK + CQP + TY+ L++A A
Sbjct: 154 CKPDTSVYNSLIGAHLHSRDKSKALAKALGYFEKMKCIARCQPTIVTYNILLRAFAQAGD 213
Query: 231 FELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMN 290
+ ++ L++D+DE V+P+ T N VL YGK GM +ME VL M +S C+PDV T N
Sbjct: 214 TKQVDILFKDLDESVVSPDIYTYNGVLDAYGKNGMIKEMESVLLRM-KSKQCRPDVITFN 272
Query: 291 TILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
++ + K D ME+ ++ P TFN +I YGK R+ +K V++ M +L
Sbjct: 273 ILIDSYGRKQIFDKMEQVFKSLLRSKERPTHPTFNSMITNYGKARLREKAEYVVKKMEEL 332
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
+ T +I ++ F+++ + K + +++ Y GL +
Sbjct: 333 GYKPNYVTQECLIMMYAHCDCVSKARQVFDELVSSQNKVQLSSLNSMLDAYCMNGLHTEA 392
Query: 411 ISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
+ A + + N S Y + A +A+D + ++++ KRM ++ P+ + F EA
Sbjct: 393 DQLLDTALQKCVVPNGSTYKLLYKAYTRANDKVLVQKLLKRMNKQGIVPNKKFFLDALEA 452
Query: 471 YA 472
+
Sbjct: 453 FG 454
>gi|357519615|ref|XP_003630096.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524118|gb|AET04572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 635
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 173/346 (50%), Gaps = 5/346 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W Q L+VF ++ Q +Y G Y KL+ ++GK GQ LA +F+EM G P +Y
Sbjct: 96 KWLQCLEVFRWMQRQRWYIADNGVYSKLISVMGKKGQIRLAMWLFSEMRNTGCRPDTSVY 155
Query: 183 TALLAAYCRNSLIDEAFVT----LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
+L++A+ + +A V +MKT C+P++ TY+ L++A A + L+
Sbjct: 156 NSLISAHLHSRDKSKALVKALGYFEKMKTTERCKPNIVTYNILLRAFAQARDVNQVNYLF 215
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
+D+DE SV+P+ T N V+ GYGK GM +ME VL M +S K D+ T N ++ +
Sbjct: 216 KDLDESSVSPDIYTFNGVMDGYGKNGMIREMESVLVRM-KSNQVKLDLITYNLLIDSYGK 274
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
K Q D ME+ ++ P TFN +I YGK R+ DK +V + M + + + T
Sbjct: 275 KQQFDKMEQVFKSLSRSKEKPTLPTFNSMILNYGKARLKDKAENVFQNMTDMGYTPSFVT 334
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
+ ++I + G + F+Q+ + T +++ Y GL + S A
Sbjct: 335 HESLIHMYGLCGCVSNAVELFDQLIESKVPIKVSTLNAMLDVYCINGLQQEADSLFTRAK 394
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
++I + + Y + A KA+ ++++ K+M + P+ F
Sbjct: 395 SIKIFPDATTYKLLYKAYTKANSKELLDKLLKQMDKDSVIPNKRFF 440
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK-MSSVMEYMRKL 350
++SV KGQ+ + + + RN G P+T +N LI A+ R K + + Y K+
Sbjct: 123 LISVMGKKGQIRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKSKALVKALGYFEKM 182
Query: 351 QFPWTSS----TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
+ TYN ++ AF+ D + Y F+ + + D TF +++GY G+
Sbjct: 183 KTTERCKPNIVTYNILLRAFAQARDVNQVNYLFKDLDESSVSPDIYTFNGVMDGYGKNGM 242
Query: 407 FHKVISS-VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
++ S VR+ S Q+ ++ YN +I + K +ME+V+K + +P TF+
Sbjct: 243 IREMESVLVRMKSN-QVKLDLITYNLLIDSYGKKQQFDKMEQVFKSLSRSKEKPTLPTFN 301
Query: 466 IMTEAYAKEGMNDKVYALEQEKLQM 490
M Y K + DK + Q M
Sbjct: 302 SMILNYGKARLKDKAENVFQNMTDM 326
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A VF+ + + Y P T+ L+ + G G A ++F++++E + A+
Sbjct: 315 KAENVFQNMTDMG-YTPSFVTHESLIHMYGLCGCVSNAVELFDQLIESKVPIKVSTLNAM 373
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L YC N L EA + K++ PD TY L KA A EL++ L + MD+ S
Sbjct: 374 LDVYCINGLQQEADSLFTRAKSI-KIFPDATTYKLLYKAYTKANSKELLDKLLKQMDKDS 432
Query: 246 VTPNTVTQNIVLGGYGKA 263
V PN LG G +
Sbjct: 433 VIPNKRFFLDALGAIGSS 450
>gi|224081220|ref|XP_002306340.1| predicted protein [Populus trichocarpa]
gi|222855789|gb|EEE93336.1| predicted protein [Populus trichocarpa]
Length = 416
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 169/346 (48%), Gaps = 5/346 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W Q L+VF +++Q +Y G Y KL+ ++GK GQ +A +F+EM G P +Y
Sbjct: 68 KWLQCLEVFRWMQKQRWYVADNGCYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVY 127
Query: 183 TALLAAYC----RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
AL+ A+ + + +A +MK++ CQP+V TY+ +++A A + L+
Sbjct: 128 NALITAHLHSKDKAKSLTKALAYFEKMKSIERCQPNVVTYNIILRAFAQARNVNQVNALF 187
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
+D++E V+P+ T N VL YGK GM +ME VLS M + CKPD+ T N ++ +
Sbjct: 188 KDLEESIVSPDIYTYNGVLDAYGKNGMIREMESVLSRM-KIDQCKPDIITFNLLIDSYGK 246
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
K + ME+ ++ P TFN +I YGK R+ DK SV + M +++ + T
Sbjct: 247 KQDFEKMEQVFKSLLRSKEKPTLPTFNSMIVNYGKARLKDKAESVFKKMADMRYTPSFIT 306
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
+ ++I + F+ M G + T ++N Y GL + + A
Sbjct: 307 FESLIMMYGICDCVSKARDIFDDMVESGKEVKVSTLNAVLNVYCMNGLHMEAHILLENAR 366
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
+ + N S Y + A KA ++++ K M + P+ F
Sbjct: 367 SIGVPPNSSTYKLLYRAYTKAKMKELVQKLLKHMDKDGIIPNKRFF 412
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 88/193 (45%), Gaps = 5/193 (2%)
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY----GKKRMYDKMSSVMEYM 347
++SV KGQ M + + RN G P+T +N LI A+ K + K + E M
Sbjct: 95 LISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKSLTKALAYFEKM 154
Query: 348 RKLQFPWTSS-TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
+ ++ + TYN ++ AF+ + + F+ + + D T+ +++ Y G+
Sbjct: 155 KSIERCQPNVVTYNIILRAFAQARNVNQVNALFKDLEESIVSPDIYTYNGVLDAYGKNGM 214
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
++ S + Q ++ +N +I + K D +ME+V+K + +P TF+
Sbjct: 215 IREMESVLSRMKIDQCKPDIITFNLLIDSYGKKQDFEKMEQVFKSLLRSKEKPTLPTFNS 274
Query: 467 MTEAYAKEGMNDK 479
M Y K + DK
Sbjct: 275 MIVNYGKARLKDK 287
>gi|255582522|ref|XP_002532046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528289|gb|EEF30336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 478
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 169/348 (48%), Gaps = 5/348 (1%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+ +W Q L+VF +++Q +Y G Y KL+ ++GK GQ +A +F+EM G P
Sbjct: 109 RDKWLQCLEVFRWMQKQRWYIADSGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDSS 168
Query: 181 LYTALLAAYCRNSLIDEAFVT----LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
+Y AL+ A+ + +A + +MK + CQP+V TY+ L++A A +
Sbjct: 169 VYNALITAHLHSKDKAKALIKALGYFEKMKGMQRCQPNVVTYNILLRAFAQARNVNQVNA 228
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
L++D+D+ V+P+ T N V+ YGK GM +ME VLS M +S CKPD+ T N ++ +
Sbjct: 229 LFKDLDQSIVSPDIYTYNGVMDAYGKNGMIREMESVLSRM-KSNQCKPDIITFNLLIDSY 287
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
K D ME+ ++ + P TFN +I YGK R + SV++ M K+++
Sbjct: 288 GKKQDFDKMEQVFKSLLHSKERPTLPTFNSMITNYGKARQKENAESVLQKMTKMKYTPNF 347
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
TY ++I + F+ M G + T +++ Y GL +
Sbjct: 348 ITYESLIMMYGFCDSVSKAREIFDDMIESGKEVKVSTLNAMLDVYCLNGLPMEADLLFDN 407
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
A + + + + Y + A KA+ ++++ K M P+ F
Sbjct: 408 ARNVGLLPDSTTYKLLYKAYTKANMKKLVQKLLKHMDRDGIIPNKRFF 455
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 5/211 (2%)
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY----GKKRMYDKM 340
D + ++SV KGQ M + + RN G P++ +N LI A+ K + K
Sbjct: 131 DSGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDSSVYNALITAHLHSKDKAKALIKA 190
Query: 341 SSVMEYMRKLQFPWTSS-TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
E M+ +Q + TYN ++ AF+ + + F+ + + D T+ +++
Sbjct: 191 LGYFEKMKGMQRCQPNVVTYNILLRAFAQARNVNQVNALFKDLDQSIVSPDIYTYNGVMD 250
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
Y G+ ++ S + Q ++ +N +I + K D +ME+V+K + RP
Sbjct: 251 AYGKNGMIREMESVLSRMKSNQCKPDIITFNLLIDSYGKKQDFDKMEQVFKSLLHSKERP 310
Query: 460 DSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
TF+ M Y K + ++ Q+ +M
Sbjct: 311 TLPTFNSMITNYGKARQKENAESVLQKMTKM 341
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 173/356 (48%), Gaps = 6/356 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
A+ +F+ L + +P E Y ++ L K G + A + M + +P YT +
Sbjct: 160 DAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIV 219
Query: 186 LAAYCRNSLIDEAFVTLNQMK--TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
+ A+C++ ++D A LN+MK ++P PD++TYSTLI A ++E + TL+ +M
Sbjct: 220 IDAFCKDGMLDGATSLLNEMKQKSIP---PDIFTYSTLIDALCKLSQWENVRTLFLEMIH 276
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
++ PN T N V+ G K G + E ++ M+E PDV T N I+ + +GQVD
Sbjct: 277 LNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGV-DPDVITYNMIIDGYGLRGQVD 335
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
++ N I+P+ ++NILI Y +++ D+ V + + + T N ++
Sbjct: 336 RAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLL 395
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
++G K + F++M + G D T C L+ GY GL + +S + +
Sbjct: 396 HGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRRED 455
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
N+ Y AVI K L + ++++ PD T++ M Y +EG+ D+
Sbjct: 456 TNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDE 511
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/337 (19%), Positives = 129/337 (38%), Gaps = 38/337 (11%)
Query: 195 IDEAFVTLNQM-KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE---------- 243
+D+AF QM +T P P V ++S L+KA V + + +L++++ +
Sbjct: 53 LDDAFSLFRQMVRTKP--LPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFIL 110
Query: 244 -------------------------RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
+ + N VT ++ G + ++
Sbjct: 111 SIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVR 170
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
C+P+ T+++ KG P TRT+ I+I A+ K M D
Sbjct: 171 ENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLD 230
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+S++ M++ P TY+ +I+A + +++ F +M + + TF +I
Sbjct: 231 GATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVI 290
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
+G G +R + + +V YN +I + ++ M K
Sbjct: 291 DGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIE 350
Query: 459 PDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
PD +++I+ YA++ D+ + +E Q L+ S
Sbjct: 351 PDIISYNILINGYARQKKIDEAMQVCREISQKGLKPS 387
>gi|356528509|ref|XP_003532845.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Glycine max]
Length = 580
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 171/346 (49%), Gaps = 5/346 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
W Q L+VF +++Q +Y G Y KL+ ++GK GQ +A +F+EM G P +Y
Sbjct: 151 NWLQCLEVFRWMQKQRWYIADNGIYSKLISVMGKKGQTRMAMWLFSEMRNTGCRPDTSVY 210
Query: 183 TALLAAYCRN----SLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
AL+ A+ R+ + +A +MK + C+P++ TY+ L++A A E + +L+
Sbjct: 211 NALITAHLRSRDKIKALAKAIGYFQKMKGMERCKPNIVTYNILLRAFAQARNVEQVNSLF 270
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
+D+DE V+P+ T N V+ YGK GM +ME VL+ M +S CKPD+ T N ++ +
Sbjct: 271 KDLDESIVSPDIYTFNGVMDAYGKNGMIREMEAVLARM-KSNQCKPDLITFNLLIDSYGK 329
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
K ME+ ++ + P TFN +I YGK R+ DK V + M + + + T
Sbjct: 330 KQAFGKMEQVFKSLLHSKERPSLPTFNSMILNYGKARLKDKAEDVFKKMTDMGYTLSFVT 389
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
+ ++I + F+++ + T +++ Y GL + S A
Sbjct: 390 HESMIYMYGFCDCVSRAAQLFDELVESKVHIKVSTLNAMLDVYCLNGLPQEADSLFERAI 449
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
++I + S + + A KA+ ++++ K M + P+ F
Sbjct: 450 SIKIHPDSSTFKLLYKAYTKANQKELLDKLLKHMDKDGIIPNKRFF 495
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 91/196 (46%), Gaps = 9/196 (4%)
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV---MEYMR 348
++SV KGQ M + + RN G P+T +N LI A+ + R DK+ ++ + Y +
Sbjct: 178 LISVMGKKGQTRMAMWLFSEMRNTGCRPDTSVYNALITAHLRSR--DKIKALAKAIGYFQ 235
Query: 349 KLQFPWTSS----TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
K++ TYN ++ AF+ + + + F+ + + D TF +++ Y
Sbjct: 236 KMKGMERCKPNIVTYNILLRAFAQARNVEQVNSLFKDLDESIVSPDIYTFNGVMDAYGKN 295
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
G+ ++ + + Q ++ +N +I + K +ME+V+K + RP TF
Sbjct: 296 GMIREMEAVLARMKSNQCKPDLITFNLLIDSYGKKQAFGKMEQVFKSLLHSKERPSLPTF 355
Query: 465 SIMTEAYAKEGMNDKV 480
+ M Y K + DK
Sbjct: 356 NSMILNYGKARLKDKA 371
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 173/356 (48%), Gaps = 6/356 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
A+ +F+ L + +P E Y ++ L K G + A + M + +P +Y+ +
Sbjct: 160 DAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIV 219
Query: 186 LAAYCRNSLIDEAFVTLNQMK--TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
+ A+C++ ++D A LN+MK ++P PD++TYSTLI A ++E + TL+ +M
Sbjct: 220 IDAFCKDGMLDGATSLLNEMKQKSIP---PDIFTYSTLIDALCKLSQWENVRTLFLEMIH 276
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
++ PN T N V+ G K G + E ++ M+E PDV T N I+ + +GQVD
Sbjct: 277 LNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGV-DPDVITYNMIIDGYGLRGQVD 335
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
++ N I+P ++NILI Y +++ D+ V + + + T N ++
Sbjct: 336 RAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLL 395
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
++G K + F++M + G D T C L+ GY GL + +S + +
Sbjct: 396 HGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRRED 455
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
N+ Y AVI K L + ++++ PD T++ M Y +EG+ D+
Sbjct: 456 TNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDE 511
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/337 (18%), Positives = 128/337 (37%), Gaps = 38/337 (11%)
Query: 195 IDEAFVTLNQM-KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD----------- 242
+D+AF QM +T P P V ++S L+KA V + + +L++++
Sbjct: 53 LDDAFSLFRQMVRTKP--LPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFIL 110
Query: 243 ------------------------ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
++ + N V N +L G + ++
Sbjct: 111 SIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVR 170
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
C+P+ T+++ KG P T ++I+I A+ K M D
Sbjct: 171 ENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLD 230
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+S++ M++ P TY+ +I+A + +++ F +M + + TF +I
Sbjct: 231 GATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVI 290
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
+G G +R + + +V YN +I + ++ M K
Sbjct: 291 DGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIE 350
Query: 459 PDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
P+ +++I+ YA++ D+ + +E Q L+ S
Sbjct: 351 PNIISYNILINGYARQKKIDEAMQVCREISQKGLKPS 387
>gi|223946379|gb|ACN27273.1| unknown [Zea mays]
gi|413924536|gb|AFW64468.1| pentatricopeptide repeat 5 [Zea mays]
Length = 386
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 174/350 (49%), Gaps = 8/350 (2%)
Query: 134 LKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYC--- 190
+++Q +Y G Y KL+ ++G+ GQ +A +F++M G +P +Y +L+ A+
Sbjct: 1 MQKQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNSGCKPDTSVYNSLIGAHLHSR 60
Query: 191 -RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
+ + +A +MK + CQP + TY+ L++A A + ++ L++D+DE V+P+
Sbjct: 61 DKTKALAKALGYFEKMKCIERCQPTIVTYNILLRAFAQAGDTKQVDMLFKDLDESVVSPD 120
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
T N VL YGK GM +ME VL M +S C+PDV T N ++ + K D ME+ +
Sbjct: 121 VYTYNGVLDAYGKNGMIKEMESVLVRM-KSTQCRPDVITFNILIDSYGRKQTFDKMEQVF 179
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
+ P TFN +I YG+ R+ +K SV+E M +L F T +I ++
Sbjct: 180 KSLLRSKERPTHPTFNSMITNYGRARLREKAESVVEKMEELGFKPNYVTQECLIIMYAHC 239
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFY 429
F+++ K + ++ Y GL + + A + + N S Y
Sbjct: 240 DCVSKARQVFDELVTSQTKVHLSSLNSMLEAYCMNGLHTEADRLLDTALQQCVVPNGSTY 299
Query: 430 NAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ A KA+D + ++++ KRM ++ P+ + F EA+ G +D+
Sbjct: 300 KLLYKAYTKANDKLLVQKLLKRMNKQGIVPNKKFFLDALEAF---GTSDR 346
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 179/372 (48%), Gaps = 8/372 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QALQVF L+E Y+ KE + ++ +LG+ G+ LAR++F M + G+ P+ YTAL
Sbjct: 12 QALQVFRFLQEHLEYELKEHNCVTIISILGREGKLGLAREIFEGMSKAGVAPSVHAYTAL 71
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD-AMRFELIETLYQDMDER 244
L+ Y + L+ EA+ MK C P+V TY+TLI AC A R + L+++M +
Sbjct: 72 LSGYAKQGLLKEAWALFEAMKE-KGCSPNVLTYNTLINACTKRAYRLPDLVGLFEEMKQA 130
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
V PN +T N ++ +FD ++L M ++ C P+V + T+++ G++D
Sbjct: 131 GVQPNDITYNCMVNACVCLSLFDTASQILKEM-KAVNCLPNVISYTTMINSLGRSGRLDE 189
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+E+ + G P + T+N L+ AY ++ Y+K + M TYN VI+
Sbjct: 190 AVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVID 249
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
G E F +M +G D T+ +++ Y+ + ++ +
Sbjct: 250 MCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTP 309
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
++ YN ++ A KA E +++ +K P+ +FS + Y + G Y E
Sbjct: 310 DLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLG-----YFEE 364
Query: 485 QEKLQMLLEASG 496
E+ + + A+G
Sbjct: 365 AERAWVEMRATG 376
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 118/274 (43%), Gaps = 38/274 (13%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P +Y ++ LG+SG+ + A ++F EM E G P Y +LL AY R ++A
Sbjct: 169 PNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCL 228
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
M+ C PD+YTY+T+I C F E ++ +M + TP+ VT N +L Y
Sbjct: 229 FVGMED-EGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYS 287
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K + +L M + A C PD+WT N +L G + + + + G P
Sbjct: 288 KWSRRGRARDLLKTM-KRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNL 346
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+F+ LI YG+ + Y + + W +
Sbjct: 347 VSFSALINMYGR----------LGYFEEAERAWV-------------------------E 371
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
M A G + +C L+N Y++ G++ KV+ +R
Sbjct: 372 MRATGCVPNATAYCGLMNSYSHHGMY-KVLCCIR 404
>gi|356511125|ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Glycine max]
Length = 503
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 169/345 (48%), Gaps = 5/345 (1%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
W Q L+VF +++Q +Y G Y KL+ ++GK GQ +A +F+EM G P +Y
Sbjct: 89 WLQCLEVFRWMQKQRWYIADNGIYSKLISVMGKKGQTRMAMWLFSEMRNTGCRPDTSVYN 148
Query: 184 ALLAAYC----RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
AL+ A+ + + +A +MK + C+P++ TY+ L++A A E + +L++
Sbjct: 149 ALITAHLHSRDKTKALAKAIGYFQKMKGMERCKPNIVTYNILLRAFAQARNVEQVNSLFK 208
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
D+DE V+P+ T N V+ YGK GM +ME VL+ M +S CKPD+ T N ++ + K
Sbjct: 209 DLDESIVSPDIYTFNGVMDAYGKNGMIREMEAVLARM-KSNQCKPDLITFNLLIDSYGKK 267
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
+ ME+ ++ TFN +I YGK R+ DK V + M + + + T+
Sbjct: 268 QEFGKMEQVFKSLLRSKERASLPTFNSMILNYGKARLKDKAEDVFKRMTDMGYTPSFVTH 327
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
++I + F+++ T +++ Y GL + S A+
Sbjct: 328 ESLIYMYGFCDCVSRAAQLFDELVESKAHIKVSTLNAMLDVYCINGLPQEADSLFERANS 387
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
++I + S + + A KA+ ++++ K M + P+ F
Sbjct: 388 IKIYPDSSTFKLLYKAYTKANQKELLDKLLKHMDKDGIVPNKRFF 432
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 5/194 (2%)
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK-MSSVMEYMRKL 350
++SV KGQ M + + RN G P+T +N LI A+ R K ++ + Y +K+
Sbjct: 115 LISVMGKKGQTRMAMWLFSEMRNTGCRPDTSVYNALITAHLHSRDKTKALAKAIGYFQKM 174
Query: 351 QFPWTSS----TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
+ TYN ++ AF+ + + + F+ + + D TF +++ Y G+
Sbjct: 175 KGMERCKPNIVTYNILLRAFAQARNVEQVNSLFKDLDESIVSPDIYTFNGVMDAYGKNGM 234
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
++ + + Q ++ +N +I + K + +ME+V+K + R TF+
Sbjct: 235 IREMEAVLARMKSNQCKPDLITFNLLIDSYGKKQEFGKMEQVFKSLLRSKERASLPTFNS 294
Query: 467 MTEAYAKEGMNDKV 480
M Y K + DK
Sbjct: 295 MILNYGKARLKDKA 308
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 171/351 (48%), Gaps = 3/351 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +FE +K F +P TY LL + GKS +P+ A +V +M P+ Y +L
Sbjct: 268 EALDLFEEIKVAGF-RPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSL 326
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
++AY R L+++A V +M +PDVYTY+TL+ V+A + EL ++++M +
Sbjct: 327 VSAYVRGGLLEDALVLKRKMVD-KGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVG 385
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN T N ++ YG G F++M +V ++ C PD+ T NT+L+VF G +
Sbjct: 386 CKPNICTFNALIKMYGDRGKFEEMVKVFKE-IKVCKCSPDIVTWNTLLAVFGQNGMDSEV 444
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+E+ + PE TFN LI AYG+ +D+ + + M + STYN V+
Sbjct: 445 SGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLAT 504
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ G + E +M G K + T+ L++ YAN ++ + I +
Sbjct: 505 LARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVERMNALAEEIYSGTIKTH 564
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
++ K D L+E ER + +++ PD T + M Y ++ M
Sbjct: 565 AVLLKTLVLVNSKVDLLVETERAFLEFRKRGISPDVTTSNAMLSIYGRKKM 615
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 167/374 (44%), Gaps = 34/374 (9%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y L+ + + A KVF +M E G EPT Y A+L Y + + + L Q
Sbjct: 182 YTSLITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKMGMPWAKIIALVQDM 241
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-- 264
PD+ TY+TLI C +E L++++ P+ VT N +L YGK+
Sbjct: 242 KCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRP 301
Query: 265 -----MFDQMER-----------------VLSGMLESATC----------KPDVWTMNTI 292
+ QME V G+LE A KPDV+T T+
Sbjct: 302 KEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTL 361
Query: 293 LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF 352
LS F N G+ ++ +E+ R G P TFN LI YG + +++M V + ++ +
Sbjct: 362 LSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKC 421
Query: 353 PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVIS 412
T+N ++ F G + FE+M + TF LI+ Y G F + ++
Sbjct: 422 SPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMA 481
Query: 413 SVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
+ + + ++ ++S YNAV++ + + E+V MK+ C+P+ T+S + AYA
Sbjct: 482 AYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYA 541
Query: 473 KEGMNDKVYALEQE 486
+++ AL +E
Sbjct: 542 NGREVERMNALAEE 555
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 201/457 (43%), Gaps = 57/457 (12%)
Query: 94 LKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVL 153
LK+K+ K K V T S V + A++VFE +++ +P T+ L+ +
Sbjct: 342 LKRKMVDKG-IKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGC-KPNICTFNALIKM 399
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
G G+ E KVF E+ P + LLA + +N + E +MK P
Sbjct: 400 YGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKR-SRFAP 458
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
+ T++TLI A F+ Y+ M E V+P+ T N VL + G+++Q E+VL
Sbjct: 459 ERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVL 518
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMM---------------------------- 305
+ M + CKP+ T +++L +AN +V+ M
Sbjct: 519 AEM-KDGGCKPNEVTYSSLLHAYANGREVERMNALAEEIYSGTIKTHAVLLKTLVLVNSK 577
Query: 306 -------ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
ER + +FR GI P+ T N ++ YG+K+M K + ++ +M + + ++
Sbjct: 578 VDLLVETERAFLEFRKRGISPDVTTSNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTS 637
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH---KVISSVR 415
YN+++ +S + E F ++ +G++ D ++ +I Y + ++I ++
Sbjct: 638 YNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMK 697
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + + +V YN I+A +E V + M ++ C+P+ T++ + + Y K
Sbjct: 698 VPAPVP---DVVTYNTFIAAYAADSMFVEAIDVIRYMIKQGCKPNHNTYNSIVDWYCKLK 754
Query: 476 MNDKVYAL------------EQEKLQMLLEASGHWQQ 500
+ D+ + E EK ++L + W Q
Sbjct: 755 LRDEACSFVQNLGDLDPQISEDEKSRLLERIAKKWSQ 791
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 177/357 (49%), Gaps = 9/357 (2%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
Q+ + +++ + + QP TY L+ K G+ + A ++ NEM E G++PT ++Y
Sbjct: 209 QYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIY 268
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
T +++ + + + A +M+ + C+PDV+TY+ LI+ A R + Y +M
Sbjct: 269 TMIISLFFKLDNVHGALSLFEEMRYM-YCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQ 327
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL-SVFANKGQ 301
P+TV N ++ GKAG D ++ M S C P+V T NTI+ ++F +K +
Sbjct: 328 REGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVS-HCIPNVVTYNTIIKALFESKSR 386
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
V + W+E+ + GI P T++ILI + K +K ++E M + FP + Y +
Sbjct: 387 VSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCS 446
Query: 362 VIEAFSDMGDAKHMEYT---FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
+I+A +G AK + F+++ + + + +I AG I+ S
Sbjct: 447 LIDA---LGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMS 503
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
KL NV YNA++S +A L E ++M+E C PD +++I+ AK G
Sbjct: 504 KLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTG 560
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 127/294 (43%), Gaps = 29/294 (9%)
Query: 75 GVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEML 134
GVS IP + T IK L E K++ V+E FS WF+ ++ +
Sbjct: 362 GVSHC-IPNVVTYNTIIKAL---FESKSR-------VSEVFS-------WFERMK-GSGI 402
Query: 135 KEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSL 194
PF TY L+ K+ + E A + EM E+G P P Y +L+ A +
Sbjct: 403 SPSPF------TYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 456
Query: 195 IDEAFVTLNQMKTLPNC-QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQ 253
D A ++K NC Y+ +IK A R + L+ +M + TPN
Sbjct: 457 YDLACELFQELKE--NCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAY 514
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
N ++ G +A M D+ + M E C PD+ + N IL+ A G +
Sbjct: 515 NALMSGLARACMLDEALTTMRKMQEHG-CLPDINSYNIILNGLAKTGGPHRAMEMLTNMK 573
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS 367
N I P+ ++N ++ A M+++ + +M+ M L F + TY++++EA
Sbjct: 574 NSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIG 627
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 105/234 (44%), Gaps = 6/234 (2%)
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKA 224
F M GI P+P Y+ L+ +C+ + I++A + L +M K P C Y +LI A
Sbjct: 394 FERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPA---AYCSLIDA 450
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
A R++L L+Q++ E + + +++ GKAG D + M C P
Sbjct: 451 LGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEM-SKLGCTP 509
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
+V+ N ++S A +D K + G P+ ++NI++ K + ++
Sbjct: 510 NVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEML 569
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
M+ + +YN V+ A S G + ++M+A G + D T+ ++
Sbjct: 570 TNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSIL 623
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 151/396 (38%), Gaps = 38/396 (9%)
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI-EPTPELYTALL 186
+Q F ++ YQ TYM L+ L Q K+ EMV I TP + ++
Sbjct: 107 MQFFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVI 166
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM-DERS 245
+I +A Q+K CQP Y+++I + ++E + LY +M +E
Sbjct: 167 RMLGNAKMIGKAITIFYQIKA-RKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGH 225
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT------------------------ 281
P+TVT + ++ + K G D R+L+ M E+
Sbjct: 226 CQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGAL 285
Query: 282 ----------CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
C+PDV+T ++ G++D +Y + + G P+T N +I
Sbjct: 286 SLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFL 345
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA-FSDMGDAKHMEYTFEQMHAEGMKAD 390
GK D + E M TYN +I+A F + FE+M G+
Sbjct: 346 GKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPS 405
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
T+ LI+G+ K + + + + Y ++I A KA +++
Sbjct: 406 PFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQ 465
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+KE + +++M + K G D L E
Sbjct: 466 ELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDE 501
>gi|168000535|ref|XP_001752971.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695670|gb|EDQ82012.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 391
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 166/345 (48%), Gaps = 3/345 (0%)
Query: 129 QVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAA 188
QVF K + ++ Y K++ G+ QP+LA +F+EM + GI+ T + AL+ +
Sbjct: 1 QVFNWKKSKLGWEANPKEYAKMISFAGRISQPQLAADLFDEMEKRGIKKTAVSFNALIHS 60
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP 248
Y RN+ +A MK +CQP + TY+TLI E ++ L+ D E +P
Sbjct: 61 YGRNNEAHKALQLFEDMKATNDCQPTLVTYNTLISMYSRMGATEEMKKLFLDCKEAGFSP 120
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW 308
+ T N ++ GY +AG QME + L++ CK DV T N + +A V+ ME
Sbjct: 121 DRHTYNALIWGYMRAGQLSQMEETFNE-LQAGECKADVITYNAQIIGYARANAVNKMEAV 179
Query: 309 YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL-QFPWTSSTYNNVIEAFS 367
+ + GI ILI Y + + ++KM + ++ M + S ++ VIE+++
Sbjct: 180 FSSMQAAGIPINAMVGEILIEVYSRTKHFEKMENALKIMDVTPGVQYGSRVHSMVIESYA 239
Query: 368 DMGDAKHMEYTFEQM-HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
D ME +M + M + K+ LI Y+ AG + ++ ++ +
Sbjct: 240 DANKLDEMEAAISRMFQNKRMFSSPKSLHALIMAYSRAGEYGRLAKTMEVVKGAGWILQS 299
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
S YN +IS K L ME+V++ M + C P ETF M +AY
Sbjct: 300 SIYNILISEYGKGGHLDRMEQVFREMMDASCPPSFETFQYMIDAY 344
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 124/277 (44%), Gaps = 2/277 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+ALQ+FE +K QP TY L+ + + G E +K+F + E G P Y AL
Sbjct: 69 KALQLFEDMKATNDCQPTLVTYNTLISMYSRMGATEEMKKLFLDCKEAGFSPDRHTYNAL 128
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ Y R + + T N+++ C+ DV TY+ I A +E ++ M
Sbjct: 129 IWGYMRAGQLSQMEETFNELQA-GECKADVITYNAQIIGYARANAVNKMEAVFSSMQAAG 187
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ N + I++ Y + F++ME L M + + + ++ +A+ ++D M
Sbjct: 188 IPINAMVGEILIEVYSRTKHFEKMENALKIMDVTPGVQYGSRVHSMVIESYADANKLDEM 247
Query: 306 ERWYEK-FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
E + F+N + ++ + LI AY + Y +++ ME ++ + SS YN +I
Sbjct: 248 EAAISRMFQNKRMFSSPKSLHALIMAYSRAGEYGRLAKTMEVVKGAGWILQSSIYNILIS 307
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+ G ME F +M +TF +I+ Y
Sbjct: 308 EYGKGGHLDRMEQVFREMMDASCPPSFETFQYMIDAY 344
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 1/166 (0%)
Query: 309 YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ-FPWTSSTYNNVIEAFS 367
+++ GI +FN LI +YG+ K + E M+ T TYN +I +S
Sbjct: 39 FDEMEKRGIKKTAVSFNALIHSYGRNNEAHKALQLFEDMKATNDCQPTLVTYNTLISMYS 98
Query: 368 DMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVS 427
MG + M+ F G D T+ LI GY AG ++ + + +V
Sbjct: 99 RMGATEEMKKLFLDCKEAGFSPDRHTYNALIWGYMRAGQLSQMEETFNELQAGECKADVI 158
Query: 428 FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
YNA I +A+ + +ME V+ M+ ++ I+ E Y++
Sbjct: 159 TYNAQIIGYARANAVNKMEAVFSSMQAAGIPINAMVGEILIEVYSR 204
>gi|225438599|ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Vitis vinifera]
gi|296082481|emb|CBI21486.3| unnamed protein product [Vitis vinifera]
Length = 489
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 168/346 (48%), Gaps = 5/346 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W Q L+VF +++Q +Y G Y KL+ ++GK GQ +A +F+EM G P +Y
Sbjct: 113 KWLQCLEVFRWMQKQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVY 172
Query: 183 TALLAAYC----RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
AL+ A+ ++ + +A ++MK + C+P++ TY+ L++A A L+
Sbjct: 173 NALITAHLHSRDKSKALIKALGYFDKMKGMERCKPNIVTYNILLRAFAQAQNVNQANALF 232
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
++++E V+P+ T N V+ YGK GM +ME VLS M +S CKPD+ T N ++ +
Sbjct: 233 KELNESIVSPDIFTFNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNVLIDSYGR 291
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
+ + D ME+ ++ P TFN +I YGK R+ +K +V + M + + T
Sbjct: 292 RQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLKEKAENVFKKMTDMGYAPNFIT 351
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
Y ++I + F++M A + T ++ Y GL + + A
Sbjct: 352 YESLIMMYGFCDCISRAREIFDEMMASKKEMKVSTLNAMLEVYCMNGLPMEADLLLERAR 411
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
K + S Y + A KAD +E++ K M P+ F
Sbjct: 412 KNRPFPGSSTYKLLYKAYTKADQKELLEKLLKLMDSDGILPNKRFF 457
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 131/287 (45%), Gaps = 10/287 (3%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K +AL F+ +K +P TY LL ++ A +F E+ E + P
Sbjct: 187 KALIKALGYFDKMKGMERCKPNIVTYNILLRAFAQAQNVNQANALFKELNESIVSPDIFT 246
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+ ++ AY +N +I E L++MK+ C+PD+ T++ LI + F+ +E +++ +
Sbjct: 247 FNGVMDAYGKNGMIKEMESVLSRMKS-NQCKPDIITFNVLIDSYGRRQEFDKMEQVFKSL 305
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
P T N ++ YGKA + ++ E V M + P+ T +++ ++ G
Sbjct: 306 LRSKEKPTLPTFNSMITNYGKARLKEKAENVFKKMTDMGYA-PNFITYESLIMMY---GF 361
Query: 302 VDMMERWYEKFRNFGI---DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ-FPWTSS 357
D + R E F + + T N ++ Y + + ++E RK + FP SS
Sbjct: 362 CDCISRAREIFDEMMASKKEMKVSTLNAMLEVYCMNGLPMEADLLLERARKNRPFP-GSS 420
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
TY + +A++ + +E + M ++G+ + + F + + ++
Sbjct: 421 TYKLLYKAYTKADQKELLEKLLKLMDSDGILPNKRFFLEALGAFGSS 467
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 87/194 (44%), Gaps = 5/194 (2%)
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK-MSSVMEYMRKL 350
++SV KGQ M + + RN G P+T +N LI A+ R K + + Y K+
Sbjct: 140 LISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSRDKSKALIKALGYFDKM 199
Query: 351 ----QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
+ TYN ++ AF+ + F++++ + D TF +++ Y G+
Sbjct: 200 KGMERCKPNIVTYNILLRAFAQAQNVNQANALFKELNESIVSPDIFTFNGVMDAYGKNGM 259
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
++ S + Q ++ +N +I + + + +ME+V+K + +P TF+
Sbjct: 260 IKEMESVLSRMKSNQCKPDIITFNVLIDSYGRRQEFDKMEQVFKSLLRSKEKPTLPTFNS 319
Query: 467 MTEAYAKEGMNDKV 480
M Y K + +K
Sbjct: 320 MITNYGKARLKEKA 333
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 176/357 (49%), Gaps = 9/357 (2%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
Q+ + +++ + + P TY L+ K G+ + A ++ NEM E G++PT ++Y
Sbjct: 209 QYEKVHELYNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIY 268
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
T +++ + + + A +M+ + C+PDV+TY+ LI+ A R + Y +M
Sbjct: 269 TMIISLFFKLDNVHGALSLFEEMRYM-YCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQ 327
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL-SVFANKGQ 301
P+TV N ++ GKAG D ++ M S C P+V T NTI+ ++F +K +
Sbjct: 328 REDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVS-HCIPNVVTYNTIIKALFESKSR 386
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
V + W+E+ + GI P T++ILI + K +K ++E M + FP + Y +
Sbjct: 387 VSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCS 446
Query: 362 VIEAFSDMGDAKHMEYT---FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
+I+A +G AK + F+++ + + + +I AG I+ S
Sbjct: 447 LIDA---LGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMS 503
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
KL NV YNA++S +A L E ++M+E C PD +++I+ AK G
Sbjct: 504 KLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTG 560
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 127/294 (43%), Gaps = 29/294 (9%)
Query: 75 GVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEML 134
GVS IP + T IK L E K++ V+E FS WF+ ++ +
Sbjct: 362 GVSHC-IPNVVTYNTIIKAL---FESKSR-------VSEVFS-------WFERMK-GSGI 402
Query: 135 KEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSL 194
PF TY L+ K+ + E A + EM E+G P P Y +L+ A +
Sbjct: 403 SPSPF------TYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 456
Query: 195 IDEAFVTLNQMKTLPNC-QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQ 253
D A ++K NC Y+ +IK A R + L+ +M + TPN
Sbjct: 457 YDLACELFQELKE--NCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAY 514
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
N ++ G +A M D+ + M E C PD+ + N IL+ A G +
Sbjct: 515 NALMSGLARACMLDEALTTMRKMQEHG-CLPDINSYNIILNGLAKTGGPHRAMEMLTNMK 573
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS 367
N I P+ ++N ++ A M+++ + +M+ M L F + TY++++EA
Sbjct: 574 NSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIG 627
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 105/234 (44%), Gaps = 6/234 (2%)
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKA 224
F M GI P+P Y+ L+ +C+ + I++A + L +M K P C Y +LI A
Sbjct: 394 FERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPA---AYCSLIDA 450
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
A R++L L+Q++ E + + +++ GKAG D + M C P
Sbjct: 451 LGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEM-SKLGCTP 509
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
+V+ N ++S A +D K + G P+ ++NI++ K + ++
Sbjct: 510 NVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEML 569
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
M+ + +YN V+ A S G + ++M+A G + D T+ ++
Sbjct: 570 TNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSIL 623
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 150/396 (37%), Gaps = 38/396 (9%)
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI-EPTPELYTALL 186
+Q F ++ YQ TYM L+ L Q K+ EMV I TP + ++
Sbjct: 107 MQFFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVI 166
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM-DERS 245
+I +A Q+K CQP Y+++I + ++E + LY +M +E
Sbjct: 167 RMLGNAKMIGKAITIFYQIKA-RKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGH 225
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT------------------------ 281
P+TVT + ++ + K G D R+L+ M E+
Sbjct: 226 CHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGAL 285
Query: 282 ----------CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
C+PDV+T ++ G++D +Y + + P+T N +I
Sbjct: 286 SLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFL 345
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA-FSDMGDAKHMEYTFEQMHAEGMKAD 390
GK D + E M TYN +I+A F + FE+M G+
Sbjct: 346 GKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPS 405
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
T+ LI+G+ K + + + + Y ++I A KA +++
Sbjct: 406 PFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQ 465
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+KE + +++M + K G D L E
Sbjct: 466 ELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDE 501
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 162/351 (46%), Gaps = 3/351 (0%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
Q +A +FE LK + P +Y L+ LG++G+ E A +V EM +G +P Y
Sbjct: 24 QCEEAQLLFEELKAAK-WTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTY 82
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
L+ + DEA L +M+ C PDV TY+ LI A R TL+ +M
Sbjct: 83 NTLVDCLGKAGQFDEALRLLAEMRD-NGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMR 141
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
ER P+T T N ++ G GK G + +L M E C PDV T +++++ G+
Sbjct: 142 ERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEM-ERHGCPPDVMTYSSLITGLGKDGET 200
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ +++ + G P++ TF L+ A GK D +++ M++ TYN +
Sbjct: 201 VKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNAL 260
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I F +GD ++M G K D T+ CLI G A + ++ K
Sbjct: 261 IAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGC 320
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ YN +I+ KA L + R++ RMK K C PD T+S + A K
Sbjct: 321 PPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGK 371
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 181/396 (45%), Gaps = 38/396 (9%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A ++F+ +K + +P T+ L+ LGK+G+ + A ++ +EM E G++P Y AL
Sbjct: 202 KAFKLFQEMKRRG-RKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNAL 260
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+A + + + EA+ L++MK C+PDV TYS LI + A + + + + M++
Sbjct: 261 IAGFGKVGDLVEAYNLLDEMKR-NGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEG 319
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+T+T N ++ G GKAG+ + R+ M +S C PDV T +T+++ +V+
Sbjct: 320 CPPDTITYNTLINGLGKAGLLNDAGRLFDRM-KSKGCNPDVVTYSTLITALGKAARVESA 378
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+E+ + GI P+ T+ +I GK D + MR TYN + +
Sbjct: 379 CVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNS 438
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN-------AGLFHKVI------S 412
G K FE M G+ D T+ L+ G + GL ++I
Sbjct: 439 LGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFD 498
Query: 413 SVRLASKLQIAEN----------------------VSFYNAVISACIKADDLMEMERVYK 450
S++ L+I + S YNA+I A KA + E +
Sbjct: 499 SLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLE 558
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+KE+ +PD ++S + A + G D + L +E
Sbjct: 559 DLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEE 594
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 138/299 (46%), Gaps = 4/299 (1%)
Query: 177 PTPEL--YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELI 234
P+P + Y +LL A + +EA + ++K PDV +YS LI + A ++E
Sbjct: 5 PSPNVVTYNSLLNALAKAGQCEEAQLLFEELKA-AKWTPDVVSYSCLINSLGRAGKWEAA 63
Query: 235 ETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILS 294
+ +M + PN T N ++ GKAG FD+ R+L+ M ++ C PDV T N ++S
Sbjct: 64 LEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNG-CVPDVRTYNCLIS 122
Query: 295 VFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 354
G++ + + R G P+T T+N LI GK K ++E M + P
Sbjct: 123 TLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPP 182
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
TY+++I G+ F++M G K D+ TF L++ AG + +
Sbjct: 183 DVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELL 242
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ + V YNA+I+ K DL+E + MK C+PD T+S + K
Sbjct: 243 DEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIK 301
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 156/359 (43%), Gaps = 4/359 (1%)
Query: 129 QVFEMLKEQPFYQ--PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+ E+L+E + P TY L+ LGK G+ A K+F EM G +P +TAL+
Sbjct: 167 KAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALM 226
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
A + +D+A L++MK +P V TY+ LI L +M
Sbjct: 227 DALGKAGRVDDALELLDEMKE-RGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGC 285
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P+ VT + ++ G KA D+ +VL M E C PD T NT+++ G ++
Sbjct: 286 KPDVVTYSCLITGLIKASQLDEACQVLKKM-EKEGCPPDTITYNTLINGLGKAGLLNDAG 344
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
R +++ ++ G +P+ T++ LI A GK + + E M + TY ++I
Sbjct: 345 RLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVL 404
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G + F +M +G+ D T+ +N G F + + + +V
Sbjct: 405 GKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDV 464
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
+ Y+A++ K ++ + + K + E+ C DS F E G D+ + L Q
Sbjct: 465 ATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQ 523
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 146/341 (42%), Gaps = 39/341 (11%)
Query: 93 NLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLV 152
NL +++R K V T + + + Q +A QV + + E+ P TY L+
Sbjct: 275 NLLDEMKRNG-CKPDVVTYSCLITGLIKASQLDEACQVLKKM-EKEGCPPDTITYNTLIN 332
Query: 153 LLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQ 212
LGK+G A ++F+ M +G P Y+ L+ A + + ++ A V +M+++ Q
Sbjct: 333 GLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESV-GIQ 391
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
PD++TY ++I A + + + L+ +M + ++P+ +T N L G+ G F + ++
Sbjct: 392 PDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKI 451
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVD--------------------------MME 306
M ES PDV T + +L + +VD ++
Sbjct: 452 FEDMKESGLL-PDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILT 510
Query: 307 RWYE--------KFRNF-GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
W +F N G+ P ++N LI A K + + +E +++
Sbjct: 511 SWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIV 570
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+Y+++I A G E+M G+K +++ L+
Sbjct: 571 SYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLV 611
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 55/129 (42%)
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
TYN+++ A + G + + FE++ A D ++ CLIN AG + + V
Sbjct: 11 TYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEM 70
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
N+ YN ++ KA E R+ M++ C PD T++ + K G
Sbjct: 71 QAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRL 130
Query: 478 DKVYALEQE 486
+ + L E
Sbjct: 131 SEAFTLFAE 139
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 184/390 (47%), Gaps = 22/390 (5%)
Query: 106 AWVNTVAETFSDHVLKK----QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPE 161
W +A T +V+K+ W +AL+++E L +Y P +L +LG++ QP
Sbjct: 49 GWKEQLAPTDLCYVVKRVANTSWQRALELYECLNVARWYAPNPRMLAVMLSVLGRANQPG 108
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
LA+++F+ E I ++Y +L++ Y R+ + L +M+ C+PD+ T++ +
Sbjct: 109 LAQELFDR-AESSIGNCVQVYNSLMSVYARHGDWNSVQQLLCRMQD-RGCRPDLVTFNIV 166
Query: 222 IKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------MFDQMERVL 273
IKA M+ L +L QD+ + P+T+T N ++ +F++M+R
Sbjct: 167 IKARTRGGMQEGLASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQR-- 224
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
C PD+WT N ++SV+ G+V+ + + G P+ T+N ++ A+ +
Sbjct: 225 ------QGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFAR 278
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+++ + MR + TYN +I + G + E + QM EG D+ T
Sbjct: 279 DGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVT 338
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
F LI+ AG ++ + K Q+ + ++A+I A KAD + E Y M
Sbjct: 339 FTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFTDAEHTYSCML 398
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
RPD +S+M + + K GM +K L
Sbjct: 399 RAGVRPDLLAYSVMLDVFFKAGMPEKCIIL 428
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 140/294 (47%), Gaps = 2/294 (0%)
Query: 159 QPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTY 218
Q LA + ++ G+ P Y L++A N+ + +A + +M+ C PD++TY
Sbjct: 176 QEGLASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQR-QGCDPDIWTY 234
Query: 219 STLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
+ +I A R E ++++ M E+ TP+ VT N VL + + G +++ER+ GM+
Sbjct: 235 NAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERI-RGMMR 293
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
A C D T NT++ ++ G E Y + + G P++ TF +LI GK +
Sbjct: 294 DARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVN 353
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+ +++ E M K Q T ++ +I A++ E+T+ M G++ D + ++
Sbjct: 354 EAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFTDAEHTYSCMLRAGVRPDLLAYSVML 413
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
+ + AG+ K I + + +S Y ++ + + E+E + K M
Sbjct: 414 DVFFKAGMPEKCIILYKAMVGSGLKPELSVYAIMVRVFYQKSSVAEIENLSKEM 467
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 165/390 (42%), Gaps = 48/390 (12%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVL-LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYC 190
EM Q + Q + ++K+LV ++G + A F +M EG+E E+ + YC
Sbjct: 563 EMRTSQTYGQVQVSDFLKVLVASYDRAGMQDEALARFLDMTTEGLEMDAEVLQTAVMCYC 622
Query: 191 RNSLIDEAFVTLNQMKTLPNCQ-----PDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
R AFV + L +C D + +I + ++ E +++D+ +
Sbjct: 623 RKGF---AFVA---HELLIDCLHAFDVKDSAMHVAIIASYGKLKLWQNAEIVFRDLQQHG 676
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
NT + +L Y + G F++ R L M+ +A +P+ N +L F G+ +
Sbjct: 677 FAGNTSAYSALLSAYAETGNFERATRALDNMV-AAGLQPNATCANYVLEAFGRAGKAKEI 735
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGK-------KRMYDKM------------------ 340
++++ GI P +RTF ++ A+ + + MY +M
Sbjct: 736 SEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVFKALLAL 795
Query: 341 ----------SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
+++ ++K YN++I +S +G ++ F+ M G D
Sbjct: 796 YSRETVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPD 855
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
TF LI Y+ + + + +R K A N+S Y +ISA + + E V+K
Sbjct: 856 ATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFK 915
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+ E C+PD+ +++M Y K G + K+
Sbjct: 916 SIAETGCKPDATAYNVMINVYRKAGEHRKI 945
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 137/331 (41%), Gaps = 4/331 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP +L G++G+ + + F + E GI P + + A+ RN ++EA
Sbjct: 713 QPNATCANYVLEAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARS 772
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL-IETLYQDMDERSVTPNTVTQNIVLGG 259
QMK P + + L+ A E+ E L +D+ + + + N ++
Sbjct: 773 MYRQMKE-AGFSPSIQVFKALL-ALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMISL 830
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
Y K G + V GM E C PD T NT++ +++ V + + G P
Sbjct: 831 YSKLGSYRNAALVFKGMQEIG-CSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAP 889
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
T+ LI AYG+ + Y+ V + + + ++ YN +I + G+ + +E
Sbjct: 890 NISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEII 949
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
EQM +G + T L++ Y G K + ++ ++ + Y ++I++ +
Sbjct: 950 EQMKVDGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSIINSHLNN 1009
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
D + ++M + RP T + A
Sbjct: 1010 KDYLSAVIWLRKMTDACVRPTHVTITCFVGA 1040
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/317 (19%), Positives = 137/317 (43%), Gaps = 2/317 (0%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A VF ++ + G Y+ALL+AY + A L+ M QP+ + ++
Sbjct: 665 AEIVFRDLQQHGFAGNTSAYSALLSAYAETGNFERATRALDNM-VAAGLQPNATCANYVL 723
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
+A A + + I +Q + E ++PN+ T ++ + + G ++ R + ++ A
Sbjct: 724 EAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEE-ARSMYRQMKEAGF 782
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
P + +L++++ + E + + G++ + +N +I Y K Y +
Sbjct: 783 SPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAAL 842
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
V + M+++ ++T+N +I +S + + +M G + T+ LI+ Y
Sbjct: 843 VFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYG 902
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
+ + ++ + + YN +I+ KA + ++E + ++MK P
Sbjct: 903 RLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMKVDGFEPSLT 962
Query: 463 TFSIMTEAYAKEGMNDK 479
T ++ ++Y K G K
Sbjct: 963 TIHMLMDSYGKGGATGK 979
>gi|125541147|gb|EAY87542.1| hypothetical protein OsI_08951 [Oryza sativa Indica Group]
Length = 482
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 170/347 (48%), Gaps = 5/347 (1%)
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
VF +++Q +Y G Y KL+ ++G+ GQ +A +F++M G P +Y +L+ A+
Sbjct: 94 VFRWMQKQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNSGCRPDTSVYNSLIGAH 153
Query: 190 C----RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
++ + +A +MKT+ CQP++ TY+ L++A A + ++ L++D+DE
Sbjct: 154 LHSRDKSKALAKALGYFEKMKTIDRCQPNIVTYNILLRAFAQAGDTKQLDILFKDLDESP 213
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
V+P+ T N V+ YGK GM +ME VL M +S C+PDV T N ++ + K D M
Sbjct: 214 VSPDIYTYNGVMDAYGKNGMITEMESVLVRM-KSNQCRPDVITFNILIDSYGRKQAFDKM 272
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E+ ++ P TFN +I YGK R+ +K V++ M ++ F T +I
Sbjct: 273 EQVFKSLLRSKEKPTHPTFNSMITNYGKARLREKAECVLDKMTEMGFKPNYVTQECLIMM 332
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
++ F+++ + + +++ Y GL + + K +
Sbjct: 333 YAYCDCVSRARQIFDELVSSQNNVHLSSVNAMLDAYCMNGLPMEADQLLDSVIKKGAVPS 392
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
S Y + A KA+D ++++ KRM + P+ + F EA+
Sbjct: 393 ASTYKLLYKAYTKANDKKLIQKLLKRMNSQGIVPNKKFFLDALEAFG 439
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 84/194 (43%), Gaps = 40/194 (20%)
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK-MSSVMEYMRKL 350
++SV KGQ+ M + + RN G P+T +N LIGA+ R K ++ + Y K+
Sbjct: 114 LISVMGRKGQIRMAMWLFSQMRNSGCRPDTSVYNSLIGAHLHSRDKSKALAKALGYFEKM 173
Query: 351 QFPWTSS----TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
+ TYN ++ AF+ GD K ++ F+ + + D T+ +++ Y G+
Sbjct: 174 KTIDRCQPNIVTYNILLRAFAQAGDTKQLDILFKDLDESPVSPDIYTYNGVMDAYGKNGM 233
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ EME V RMK CRPD TF+I
Sbjct: 234 -----------------------------------ITEMESVLVRMKSNQCRPDVITFNI 258
Query: 467 MTEAYAKEGMNDKV 480
+ ++Y ++ DK+
Sbjct: 259 LIDSYGRKQAFDKM 272
>gi|125583699|gb|EAZ24630.1| hypothetical protein OsJ_08397 [Oryza sativa Japonica Group]
Length = 482
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 169/347 (48%), Gaps = 5/347 (1%)
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
VF +++Q +Y G Y KL+ ++G+ GQ +A +F++M G P +Y +L+ +
Sbjct: 94 VFRWMQKQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNSGCRPDTSVYNSLIGTH 153
Query: 190 C----RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
++ + +A +MKT+ CQP++ TY+ L++A A + ++ L++D+DE
Sbjct: 154 LHSRDKSKALAKALGYFEKMKTIDRCQPNIVTYNILLRAFAQAGDTKQLDILFKDLDESP 213
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
V+P+ T N V+ YGK GM +ME VL M +S C+PDV T N ++ + K D M
Sbjct: 214 VSPDIYTYNGVMDAYGKNGMITEMESVLVRM-KSNQCRPDVITFNILIDSYGRKQAFDKM 272
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E+ ++ P TFN +I YGK R+ +K V++ M ++ F T +I
Sbjct: 273 EQVFKSLLRSKEKPTHPTFNSMITNYGKARLREKAECVLDKMTEMGFKPNYVTQECLIMM 332
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
++ F+++ + + +++ Y GL + + K +
Sbjct: 333 YAYCDCVSRARQIFDELVSSQNNVHLSSVNAMLDAYCMNGLPMEADQLLDSVIKKGAVPS 392
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
S Y + A KA+D ++++ KRM + P+ + F EA+
Sbjct: 393 ASTYKLLYKAYTKANDKKLIQKLLKRMNSQGIVPNKKFFLDALEAFG 439
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 83/194 (42%), Gaps = 40/194 (20%)
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK-MSSVMEYMRKL 350
++SV KGQ+ M + + RN G P+T +N LIG + R K ++ + Y K+
Sbjct: 114 LISVMGRKGQIRMAMWLFSQMRNSGCRPDTSVYNSLIGTHLHSRDKSKALAKALGYFEKM 173
Query: 351 QFPWTSS----TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
+ TYN ++ AF+ GD K ++ F+ + + D T+ +++ Y G+
Sbjct: 174 KTIDRCQPNIVTYNILLRAFAQAGDTKQLDILFKDLDESPVSPDIYTYNGVMDAYGKNGM 233
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ EME V RMK CRPD TF+I
Sbjct: 234 -----------------------------------ITEMESVLVRMKSNQCRPDVITFNI 258
Query: 467 MTEAYAKEGMNDKV 480
+ ++Y ++ DK+
Sbjct: 259 LIDSYGRKQAFDKM 272
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 176/375 (46%), Gaps = 3/375 (0%)
Query: 103 KAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPEL 162
K K +N A F + + W ++L++F+ ++ Q + +P E Y ++ LLG+ G +
Sbjct: 95 KNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDK 154
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
R+VF+EM G+ T +YTA++ AY RN + LN MK P + TY+T+I
Sbjct: 155 CREVFDEMPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMKQ-ERVSPSILTYNTVI 213
Query: 223 KACV-DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
AC + +E + L+ +M + P+ +T N +LG G+ D+ E V M ES
Sbjct: 214 NACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGI 273
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
PD+ T + ++ F +++ + + + G P+ ++N+L+ AY + +
Sbjct: 274 V-PDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAM 332
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
V M+ ++TY+ ++ + G + F +M D T+ LI +
Sbjct: 333 DVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVF 392
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
G F +V++ + + N+ Y +I AC K + +++ M EK P S
Sbjct: 393 GEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSS 452
Query: 462 ETFSIMTEAYAKEGM 476
+ ++ + EA+ + +
Sbjct: 453 KAYTGVIEAFGQAAL 467
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 175/400 (43%), Gaps = 10/400 (2%)
Query: 97 KLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGK 156
K ER + + NTV + L W L +F ++ + QP TY LL
Sbjct: 198 KQERVSPSILTYNTVINACARGGL--DWEGLLGLFAEMRHEGI-QPDVITYNTLLGACAH 254
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
G + A VF M E GI P Y+ L+ + + + +++ L +M++ N PD+
Sbjct: 255 RGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNL-PDIT 313
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
+Y+ L++A + + +++ M N T +++L YGK G +D + + M
Sbjct: 314 SYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEM 373
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
S T PD T N ++ VF G + + ++P T+ LI A GK +
Sbjct: 374 KVSNT-DPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGL 432
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
Y+ ++ +M + +S Y VIEAF + F M+ G +T+
Sbjct: 433 YEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNS 492
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
I+ +A GL+ + + + ++ + +V +N VI A + E + Y M++ +
Sbjct: 493 FIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKAN 552
Query: 457 CRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
C P+ T ++ Y G+ D+ +E+ Q ++ASG
Sbjct: 553 CEPNELTLEVVLSVYCSAGLVDE----SEEQFQE-IKASG 587
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 152/365 (41%), Gaps = 3/365 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A VF + E P TY L+ GK + E ++ EM G P Y L
Sbjct: 260 EAEMVFRTMNESGIV-PDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVL 318
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L AY I EA QM+ C + TYS L+ R++ + ++ +M +
Sbjct: 319 LEAYAELGSIKEAMDVFRQMQA-AGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSN 377
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ T NI++ +G+ G F ++ + M+E +P++ T ++ G +
Sbjct: 378 TDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEE-NVEPNMETYEGLIFACGKGGLYEDA 436
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++ GI P ++ + +I A+G+ +Y++ V M ++ T TYN+ I A
Sbjct: 437 KKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHA 496
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
F+ G K E +M+ G+K D +F +I + G + + + S K N
Sbjct: 497 FARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPN 556
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
V+S A + E E ++ +K P + +M YAK + Y L
Sbjct: 557 ELTLEVVLSVYCSAGLVDESEEQFQEIKASGILPSVMCYCLMLALYAKNDRLNDAYNLID 616
Query: 486 EKLQM 490
E + M
Sbjct: 617 EMITM 621
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 128/259 (49%), Gaps = 3/259 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ GK G E A+K+ M E+GI P+ + YT ++ A+ + +L +EA V
Sbjct: 414 EPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALV 473
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
N M + P V TY++ I A ++ E + M+E + + + N V+ +
Sbjct: 474 VFNTMNEV-GSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAF 532
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ G +++ + M E A C+P+ T+ +LSV+ + G VD E +++ + GI P
Sbjct: 533 RQGGQYEEAVKSYVEM-EKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILPS 591
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA-FSDMGDAKHMEYTF 379
+ +++ Y K + ++++ M ++ +I+ F D + + +EY F
Sbjct: 592 VMCYCLMLALYAKNDRLNDAYNLIDEMITMRVSDIHQGIGQMIKGDFDDESNWQIVEYVF 651
Query: 380 EQMHAEGMKADTKTFCCLI 398
+++++EG + + L+
Sbjct: 652 DKLNSEGCGLGMRFYNALL 670
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 170/338 (50%), Gaps = 9/338 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ GK + + A ++F+EM E G+ PT ++YT +LA Y + + ++ A
Sbjct: 228 PDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRL 287
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ +MK C P V+TY+ LIK R + +L+ +M + P+ V N ++ G
Sbjct: 288 VEEMKG-KGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILG 346
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTIL-SVFANKGQVDMMERWYEKFRNFGIDPE 320
+AG + + L G ++S C P+V T NT++ ++F +K W+EK + GI P
Sbjct: 347 RAGRLEDALK-LFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPS 405
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT-- 378
+ T+ ILI + K +K ++E M + FP + Y ++I++ +G AK E
Sbjct: 406 SFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDS---LGRAKRYEAANE 462
Query: 379 -FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
F+++ ++ + + +I + N G + KL + +V YNA++S I
Sbjct: 463 LFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMI 522
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+A + E + + M+E C PD ++ +I+ AK G
Sbjct: 523 RAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTG 560
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/415 (20%), Positives = 151/415 (36%), Gaps = 51/415 (12%)
Query: 87 KRTP-IKNLKKKLERKAKAKAWVNTVAETFS------DHVLKKQWFQA-------LQVFE 132
+R P ++ L ++ R K W + + DH L Q +Q F+
Sbjct: 53 RRDPSVRTLDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVHQVLDIDVEIRAKIQFFK 112
Query: 133 MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRN 192
++ +Q TYM L+ L +SG + + +M+ P ++ +L +
Sbjct: 113 WAGKRQHFQHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKA 172
Query: 193 SLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVT 252
++++A Q+K C P Y+TLI + E I LY ++
Sbjct: 173 KMVNKALSVFYQIKG-RKCNPTATVYNTLILMLMHEGHHEKIHELYNEI----------- 220
Query: 253 QNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF 312
C PD T + ++S F + D R +++
Sbjct: 221 ------------------------CSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEM 256
Query: 313 RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
+ G+ P + + ++ Y K + ++E M+ T TY +I+ +G
Sbjct: 257 KENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRV 316
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAV 432
F M +G K D LIN AG + LQ A NV YN V
Sbjct: 317 DDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTV 376
Query: 433 ISACIKAD-DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
I A ++ E +++MK P S T++I+ + + K +K L +E
Sbjct: 377 IKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEE 431
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 109/236 (46%), Gaps = 5/236 (2%)
Query: 131 FEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYC 190
FE +K P TY L+ K+ + E A + EM E+G P P Y +L+ +
Sbjct: 394 FEKMKANGI-APSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLG 452
Query: 191 RNSLIDEAFVTLNQMKTLPNC-QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
R + A ++K NC + Y+ +IK + R L+ + ++ +P+
Sbjct: 453 RAKRYEAANELFQELKE--NCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPD 510
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
T N ++ G +AGM D+ ++ M E+ C PD+ + N IL+ A G +
Sbjct: 511 VYTYNALMSGMIRAGMIDEAHSLMRNMRENG-CTPDIKSHNIILNGLAKTGGPKRAIEMF 569
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
K + I P+ ++N ++ + M++ + +M M+ F + S TY++++EA
Sbjct: 570 TKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEA 625
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 99/234 (42%), Gaps = 6/234 (2%)
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKA 224
F +M GI P+ Y L+ +C+ + +++A + L +M K P C Y +LI +
Sbjct: 394 FEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPA---AYCSLIDS 450
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
A R+E L+Q++ E + +++ +G G + E C P
Sbjct: 451 LGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEX-EKLGCSP 509
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
DV+T N ++S G +D R G P+ ++ NI++ K + +
Sbjct: 510 DVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMF 569
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
M++ + + +YN ++ S G + +M +G + D+ T+ ++
Sbjct: 570 TKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSIL 623
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 166/388 (42%), Gaps = 36/388 (9%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
QW +AL+VF +++ ++P T +L +LG+ Q ++F + EEG Y
Sbjct: 61 QWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREEGYPLDVYAY 120
Query: 183 TALLAAYCRNSLIDEAFVTLNQMK-----------------------------------T 207
T+L++A RN EA QMK
Sbjct: 121 TSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMK 180
Query: 208 LPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFD 267
QPD YTY+T I AC E L+ M + TP+ VT N +L YGKAG ++
Sbjct: 181 AQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYN 240
Query: 268 QMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
+ VL M ESA C P++ T N +LS F G + + + GI+P+ T+ L
Sbjct: 241 EAANVLKEM-ESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSL 299
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
+ AY + ++ + MR S T+N +I + M FE M A G+
Sbjct: 300 LSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGV 359
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
+ D T+ L+ + G++ +V+ R K + + +N +I A + +
Sbjct: 360 EPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALS 419
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+Y M + C PD TF+ + A A+EG
Sbjct: 420 IYDGMLQAGCTPDLATFNTLLAALAREG 447
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 169/404 (41%), Gaps = 70/404 (17%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY +LL G++G A ++ + MV +GIEP YT+LL+AY R +++A
Sbjct: 256 PNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEI 315
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
NQM+T NC P+ +T++ LI F + +++DM V P+ VT N +LG +G
Sbjct: 316 YNQMRT-SNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFG 374
Query: 262 KAGMFDQMERVLSGMLES----------------------------------ATCKPDVW 287
K GM+ ++ +V GM ++ A C PD+
Sbjct: 375 KNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLA 434
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T NT+L+ A +G+ + E ++ P + ++ AY +K+ +++ +
Sbjct: 435 TFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTL 494
Query: 348 RKLQFPWT-----------------------------------SSTYNNVIEAFSDMGDA 372
+ P+T +ST+N +I + G
Sbjct: 495 HTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMM 554
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAV 432
TF + + G++ D T+ CL+ Y G++ K +++R ++ YN V
Sbjct: 555 DKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTV 614
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
I + K L R++ M +PDS T++ Y GM
Sbjct: 615 IFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGM 658
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 161/371 (43%), Gaps = 38/371 (10%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H K + + + +FE ++ +P T+ LL GK+G KVF M + G EP
Sbjct: 338 HGKNKNFSEMMVIFEDMQACGV-EPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEP 396
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
+ L+ AY R D+A + M C PD+ T++TL+ A R+E E +
Sbjct: 397 DKATFNILIEAYGRCGSSDQALSIYDGMLQ-AGCTPDLATFNTLLAALAREGRWEHAELI 455
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM----------------LESAT 281
+++ S PN + +L Y G ++++ ++ + L +
Sbjct: 456 LDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSK 515
Query: 282 CK------------------PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
C D T N ++S++ KG +D + R+ G++P+ T
Sbjct: 516 CSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVT 575
Query: 324 FNILIGAYGKKRMYDKMSSVM-EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
+N L+G YG++ MY K + + E M Q P S YN VI ++S G F +M
Sbjct: 576 YNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVS-YNTVIFSYSKHGQLSSATRIFHEM 634
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
+ G++ D+ T+ + Y N G+F + +S V+ K + Y ++ A K
Sbjct: 635 VSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKF 694
Query: 443 MEMERVYKRMK 453
E+ER+ K +K
Sbjct: 695 EEVERILKFIK 705
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 103/232 (44%), Gaps = 3/232 (1%)
Query: 248 PNTVTQNI--VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN + + ++ G G+ G +++ V + M +S +PD T+ +L + + Q+ +
Sbjct: 42 PNLSSSELLSIMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTV 101
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
R ++ R G + + LI A + R + + E M++ + TYN +I+
Sbjct: 102 SRLFKSLREEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDL 161
Query: 366 FSDMGDA-KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
+ G + +++ FE+M A+G++ D T+ I A+ L +
Sbjct: 162 YGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTP 221
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ YNA++ KA E V K M+ C P+ T++ + A+ + G+
Sbjct: 222 DRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGL 273
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 100/244 (40%), Gaps = 8/244 (3%)
Query: 131 FEMLKE-----QPFYQPKEGTYMKLLVLL-GKSGQPELARKVFNEMVEEGIEPTPELYTA 184
E LKE Y P +K VL+ K + A F M G + A
Sbjct: 484 LEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNA 543
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
+++ Y + ++D+A T +++ +PDV TY+ L+ + E ++
Sbjct: 544 MISMYGKKGMMDKATDTFALLRS-TGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAA 602
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
TP+ V+ N V+ Y K G R+ M+ + +PD +T NT + + N G
Sbjct: 603 GQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGI-QPDSFTYNTFVGCYVNGGMFPE 661
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ G P+ T+ L+ AY K ++++ ++++++ ++ + Y +
Sbjct: 662 ALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSSDPNFSKAAYRRIAA 721
Query: 365 AFSD 368
D
Sbjct: 722 RVDD 725
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 170/338 (50%), Gaps = 9/338 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ GK + + A ++F+EM E G+ PT ++YT +LA Y + + ++ A
Sbjct: 228 PDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRL 287
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ +MK C P V+TY+ LIK R + +L+ +M + P+ V N ++ G
Sbjct: 288 VEEMKG-KGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILG 346
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTIL-SVFANKGQVDMMERWYEKFRNFGIDPE 320
+AG + + L G ++S C P+V T NT++ ++F +K W+EK + GI P
Sbjct: 347 RAGRLEDALK-LFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPS 405
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT-- 378
+ T+ ILI + K +K ++E M + FP + Y ++I++ +G AK E
Sbjct: 406 SFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDS---LGRAKRYEAANE 462
Query: 379 -FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
F+++ ++ + + +I + N G + KL + +V YNA++S I
Sbjct: 463 LFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMI 522
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+A + E + + M+E C PD ++ +I+ AK G
Sbjct: 523 RAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTG 560
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 5/236 (2%)
Query: 131 FEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYC 190
FE +K P TY L+ K+ + E A + EM E+G P P Y +L+ +
Sbjct: 394 FEKMKANGI-APSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLG 452
Query: 191 RNSLIDEAFVTLNQMKTLPNC-QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
R + A ++K NC + Y+ +IK + R L+ +M + +P+
Sbjct: 453 RAKRYEAANELFQELKE--NCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPD 510
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
T N ++ G +AGM D+ ++ M E+ C PD+ + N IL+ A G +
Sbjct: 511 VYTYNALMSGMIRAGMIDEAHSLMRNMRENG-CTPDIKSHNIILNGLAKTGGPKRAIEMF 569
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
K + I P+ ++N ++ + M++ + +M M+ F + S TY++++EA
Sbjct: 570 TKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEA 625
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/415 (20%), Positives = 151/415 (36%), Gaps = 51/415 (12%)
Query: 87 KRTP-IKNLKKKLERKAKAKAWVNTVAETFS------DHVLKKQWFQA-------LQVFE 132
+R P ++ L ++ R K W + + DH L Q +Q F+
Sbjct: 53 RRDPSVRTLDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVHQVLDIDVEIRAKIQFFK 112
Query: 133 MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRN 192
++ +Q TYM L+ L +SG + + +M+ P ++ +L +
Sbjct: 113 WAGKRQHFQHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKA 172
Query: 193 SLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVT 252
++++A Q+K C P Y+TLI + E I LY ++
Sbjct: 173 KMVNKALSVFYQIKG-RKCNPTATVYNTLILMLMHEGHHEKIHELYNEI----------- 220
Query: 253 QNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF 312
C PD T + ++S F + D R +++
Sbjct: 221 ------------------------CSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEM 256
Query: 313 RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
+ G+ P + + ++ Y K + ++E M+ T TY +I+ +G
Sbjct: 257 KENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRV 316
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAV 432
F M +G K D LIN AG + LQ A NV YN V
Sbjct: 317 DDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTV 376
Query: 433 ISACIKAD-DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
I A ++ E +++MK P S T++I+ + + K +K L +E
Sbjct: 377 IKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEE 431
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 100/234 (42%), Gaps = 6/234 (2%)
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKA 224
F +M GI P+ Y L+ +C+ + +++A + L +M K P C Y +LI +
Sbjct: 394 FEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPA---AYCSLIDS 450
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
A R+E L+Q++ E + +++ +G G + M + C P
Sbjct: 451 LGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEM-KKLGCSP 509
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
DV+T N ++S G +D R G P+ ++ NI++ K + +
Sbjct: 510 DVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMF 569
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
M++ + + +YN ++ S G + +M +G + D+ T+ ++
Sbjct: 570 TKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSIL 623
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 182/397 (45%), Gaps = 44/397 (11%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG-IEPTPELYTA 184
+A+ +F +K + QP Y ++++L G+ E +++NEM EG P Y+A
Sbjct: 173 KAVAIFYQIKARKC-QPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSA 231
Query: 185 LLAAYCRNSLIDEAFVTLNQMKT-------------------LPN--------------- 210
L++A+C+ D A LN+MK L N
Sbjct: 232 LISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQY 291
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
C+PDV+TY+ LI+ A R + + +M P+TV N ++ GKAG D
Sbjct: 292 CRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAI 351
Query: 271 RVLSGMLESATCKPDVWTMNTIL-SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
++ M E+ C P V T NTI+ ++F +K +V + W+E+ + GI P T++ILI
Sbjct: 352 KLFEEM-ETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILID 410
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT---FEQMHAEG 386
+ K +K ++E M + FP + Y ++I+A +G AK + F+++
Sbjct: 411 GFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDA---LGKAKRYDLANELFQELKENC 467
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+ + + +I AG + ++L NV YNA++S +A L E
Sbjct: 468 GSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEAL 527
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+RM++ C PD +++I+ A AK G D+ +
Sbjct: 528 TTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGM 564
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 170/381 (44%), Gaps = 38/381 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ K G+ + A + NEM + G++PT ++YT L+A + + A
Sbjct: 224 PDTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGL 283
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+M+ C+PDV+TY+ LI+ A R + + +M P+TV N ++ G
Sbjct: 284 FEEMRH-QYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLG 342
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTIL-SVFANKGQVDMMERWYEKFRNFGIDPE 320
KAG D ++ M E+ C P V T NTI+ ++F +K +V + W+E+ + GI P
Sbjct: 343 KAGRLDDAIKLFEEM-ETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPS 401
Query: 321 TRTFNILIGAY-----------------------------------GKKRMYDKMSSVME 345
T++ILI + GK + YD + + +
Sbjct: 402 PFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQ 461
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
+++ ++ Y +I+ G F++M+ G + + L++G A AG
Sbjct: 462 ELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAG 521
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ + ++++R +++ YN +++A K + MK+ +PD+ +++
Sbjct: 522 MLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYN 581
Query: 466 IMTEAYAKEGMNDKVYALEQE 486
+ A + GM ++ L +E
Sbjct: 582 TVLGALSHAGMFEEAAKLMKE 602
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 112/241 (46%), Gaps = 20/241 (8%)
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKA 224
F M GI P+P Y+ L+ +C+ + ++A + L +M K P C Y +LI A
Sbjct: 390 FERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPA---AYCSLIDA 446
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------MFDQMERVLSGML 277
A R++L L+Q++ E + + +++ GKAG +FD+M R+
Sbjct: 447 LGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRL----- 501
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
C P+V+ N ++S A G +D + ++ G P+ ++NI++ A K
Sbjct: 502 ---GCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGP 558
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
D+ ++ M++ + +YN V+ A S G + ++M+A G D T+ +
Sbjct: 559 DRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLITYSSI 618
Query: 398 I 398
+
Sbjct: 619 L 619
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 5/238 (2%)
Query: 131 FEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYC 190
FE +K P TY L+ K+ + E A + EM E+G P P Y +L+ A
Sbjct: 390 FERMKGSGI-SPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALG 448
Query: 191 RNSLIDEAFVTLNQMKTLPNC-QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
+ D A ++K NC Y+ +IK A R + L+ +M+ TPN
Sbjct: 449 KAKRYDLANELFQELKE--NCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPN 506
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
N ++ G +AGM D+ + M + C PD+ + N IL+ A G D
Sbjct: 507 VYAYNALMSGLARAGMLDEALTTMRRMQDHG-CIPDINSYNIILNALAKTGGPDRAMGML 565
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS 367
+ I P+ ++N ++GA M+++ + +M+ M + F + TY++++EA
Sbjct: 566 CNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLITYSSILEAIG 623
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 148/351 (42%), Gaps = 41/351 (11%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL +FE ++ Q + +P TY +L+ LGK+G+ + A F+EM EG P L ++
Sbjct: 280 ALGLFEEMRHQ-YCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMI 338
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM-RFELIETLYQDMDERS 245
+ +D+A +M+TL C P V TY+T+IKA ++ R I + ++ M
Sbjct: 339 NFLGKAGRLDDAIKLFEEMETL-RCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSG 397
Query: 246 VTPNTVTQNIVLGGY-----------------------------------GKAGMFDQME 270
++P+ T +I++ G+ GKA +D
Sbjct: 398 ISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLAN 457
Query: 271 RVLSGMLES-ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+ + E+ + V+ + ++ G++D +++ G P +N L+
Sbjct: 458 ELFQELKENCGSSSARVYAV--MIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMS 515
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+ M D+ + M M+ ++YN ++ A + G M +K
Sbjct: 516 GLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKP 575
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
D ++ ++ ++AG+F + ++ + + ++ Y++++ A K D
Sbjct: 576 DAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLITYSSILEAIGKVD 626
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 183/390 (46%), Gaps = 22/390 (5%)
Query: 106 AWVNTVAETFSDHVLKK----QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPE 161
W +A T +V+K+ W +AL+++E L +Y P +L +LG++ QP
Sbjct: 38 GWKEQLAPTDLCYVVKRVANTSWQRALELYECLNVARWYAPNPRMLAVMLSVLGRANQPG 97
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
LA+++F+ E I ++Y +L++ Y R+ + L +M+ C+PD+ T++ +
Sbjct: 98 LAQELFDR-AESSIGNCVQVYNSLMSVYARHGDWNSVQQLLCRMQD-RGCRPDLVTFNIV 155
Query: 222 IKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------MFDQMERVL 273
IKA M+ L +L QD+ + P+T+T N ++ +F++M+R
Sbjct: 156 IKARTRGGMQEGLASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQR-- 213
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
C PD+WT N ++SV+ G+V+ + + G P+ T+N ++ A+ +
Sbjct: 214 ------QGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFAR 267
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+++ + MR + TYN +I + G + E + QM EG D+ T
Sbjct: 268 DGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVT 327
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
F LI+ AG ++ + K Q+ + ++A+I A KAD + E Y M
Sbjct: 328 FTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFSDAEHTYSCML 387
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
RPD +S+M + + K M +K L
Sbjct: 388 RAGVRPDLLAYSVMLDVFFKAEMPEKCIIL 417
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 139/294 (47%), Gaps = 2/294 (0%)
Query: 159 QPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTY 218
Q LA + ++ G+ P Y L++A N+ + +A + +M+ C PD++TY
Sbjct: 165 QEGLASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQR-QGCDPDIWTY 223
Query: 219 STLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
+ +I A R E ++++ M E+ TP+ VT N VL + + G +++ER+ GM+
Sbjct: 224 NAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERI-RGMMR 282
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
A C D T NT++ ++ G E Y + + G P++ TF +LI GK +
Sbjct: 283 DARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVN 342
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+ +++ E M K Q T ++ +I A++ E+T+ M G++ D + ++
Sbjct: 343 EAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFSDAEHTYSCMLRAGVRPDLLAYSVML 402
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
+ + A + K I + + +S Y ++ + L E+E + K M
Sbjct: 403 DVFFKAEMPEKCIILYKAMVGSGLKPELSVYAIMVRVFYQKSSLAEIENLSKEM 456
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 163/390 (41%), Gaps = 48/390 (12%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVL-LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYC 190
EM Q + Q + ++K+LV ++G + A F +M EG+E E+ + YC
Sbjct: 552 EMRTSQTYGQAQVSDFLKVLVASYDRAGMQDEALARFLDMTTEGLEMDAEVLQTAVMCYC 611
Query: 191 RNSLIDEAFVTLNQMKTLPNCQ-----PDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
R AFV + L +C D + +I + ++ E +++D+
Sbjct: 612 RKGF---AFVA---HELLIDCLHAFEVKDSAMHVAIIASYGKLKLWQNAEIVFRDLQRHG 665
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
NT + +L Y + G F++ R L M+ +A +P+ N +L F G+ +
Sbjct: 666 FAGNTSAYSALLSAYAETGNFERATRALDNMV-AAGLQPNAACANYVLEAFGRAGKAKEL 724
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP------------ 353
+Y++ GI P +RTF ++ A+ + ++ S+ MR+ F
Sbjct: 725 SEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMREAGFSPSIQVFKALLAL 784
Query: 354 WTSST-----------------------YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
++ T YN++I +S +G + F+ M G D
Sbjct: 785 YSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPD 844
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
TF LI Y+ + + + +R K A N+S Y +ISA + + E V+K
Sbjct: 845 ATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFK 904
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+ E C+PD+ +++M Y K G + K+
Sbjct: 905 SIAETGCKPDATAYNVMINVYRKAGEHRKI 934
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 139/331 (41%), Gaps = 4/331 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP +L G++G+ + + + + E GI P + + A+ RN ++EA
Sbjct: 702 QPNAACANYVLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARS 761
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL-IETLYQDMDERSVTPNTVTQNIVLGG 259
QM+ P + + L+ A E+ E L +D+ + + + N ++
Sbjct: 762 MYRQMRE-AGFSPSIQVFKALL-ALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISL 819
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
Y K G + + V GM E C PD T NT++ +++ V + + G P
Sbjct: 820 YSKLGSYRKAALVFKGMQEIG-CSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAP 878
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
T+ LI AYG+ + Y+ V + + + ++ YN +I + G+ + +E
Sbjct: 879 NISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEVI 938
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
EQM A+G + T L++ Y G K + ++ ++ + Y ++I++ +
Sbjct: 939 EQMKADGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSIINSHLNN 998
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
D + ++M + RP T + A
Sbjct: 999 KDYLSAVIWLRKMTDACVRPTHVTITCFVGA 1029
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 136/317 (42%), Gaps = 2/317 (0%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A VF ++ G Y+ALL+AY + A L+ M QP+ + ++
Sbjct: 654 AEIVFRDLQRHGFAGNTSAYSALLSAYAETGNFERATRALDNM-VAAGLQPNAACANYVL 712
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
+A A + + + YQ + E +TPN+ T ++ + + G ++ + M E A
Sbjct: 713 EAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMRE-AGF 771
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
P + +L++++ + E + + G++ + +N +I Y K Y K +
Sbjct: 772 SPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAAL 831
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
V + M+++ ++T+N +I +S + + +M G + T+ LI+ Y
Sbjct: 832 VFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYG 891
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
+ + ++ + + YN +I+ KA + ++E V ++MK P
Sbjct: 892 RLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEVIEQMKADGFEPSLT 951
Query: 463 TFSIMTEAYAKEGMNDK 479
T ++ ++Y K G K
Sbjct: 952 TIHMLMDSYGKGGATGK 968
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 110/240 (45%), Gaps = 3/240 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A ++ ++E F P + LL L + A ++ ++ + G+E ++Y +
Sbjct: 758 EARSMYRQMREAGF-SPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHM 816
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
++ Y + +A + M+ + C PD T++TLI + + L ++M +
Sbjct: 817 ISLYSKLGSYRKAALVFKGMQEI-GCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTG 875
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN T ++ YG+ ++ E V + E+ CKPD N +++V+ G+ +
Sbjct: 876 NAPNISTYTTLISAYGRLQAYEDAELVFKSIAETG-CKPDATAYNVMINVYRKAGEHRKI 934
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E E+ + G +P T ++L+ +YGK K V+E + ++ + Y ++I +
Sbjct: 935 EEVIEQMKADGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSIINS 994
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 179/389 (46%), Gaps = 44/389 (11%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG-IEPTPELYTA 184
QA+ +F +K + QP Y ++++L GQ E +++NEM EG P Y+A
Sbjct: 1167 QAITIFYQIKTRK-CQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSA 1225
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTL---PN------------------------------- 210
L++A+C+ D A LN+MK + P
Sbjct: 1226 LISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQY 1285
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
C+PDV+TY+ LI+ A R + + +M P+TV N ++ GKAG D
Sbjct: 1286 CRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAM 1345
Query: 271 RVLSGMLESATCKPDVWTMNTIL-SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
++ M E+ C P V T NTI+ ++F +K + + W+E+ + GI P + T++ILI
Sbjct: 1346 KLFQEM-ETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILID 1404
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT---FEQMHAEG 386
+ K +K ++E M + FP + Y ++I+A +G AK + F+++
Sbjct: 1405 GFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDA---LGKAKRYDLACELFQELKENC 1461
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+ + + +I AG I+ +KL A +V YNA++S + L E
Sbjct: 1462 GSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEAL 1521
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+RM+E C PD +++I+ AK G
Sbjct: 1522 STMRRMQEHGCIPDINSYNIILNGLAKTG 1550
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 177/400 (44%), Gaps = 38/400 (9%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
Q+ + Q++ + + P TY L+ K G+ + A ++ NEM E G++PT ++Y
Sbjct: 1199 QYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIY 1258
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
T L+A + + + A +M+ C+PDV+TY+ LI+ A R + + +M
Sbjct: 1259 TMLIALFFKFNDAHGALSLFEEMRHQ-YCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQ 1317
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL-SVFANKGQ 301
P+TV N ++ GKAG D ++ M E+ C P V T NTI+ ++F +K +
Sbjct: 1318 REGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEM-ETLRCIPSVVTYNTIIKALFESKSR 1376
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAY------------------------------ 331
+ W+E+ + GI P + T++ILI +
Sbjct: 1377 ASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCS 1436
Query: 332 -----GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
GK + YD + + +++ ++ Y +I+ G F++M+ G
Sbjct: 1437 LIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLG 1496
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
D + L++G A G+ + +S++R + +++ YN +++ K
Sbjct: 1497 CAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAM 1556
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ MK+ RPD +++ + A + GM ++ L +E
Sbjct: 1557 EMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKE 1596
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 152/348 (43%), Gaps = 4/348 (1%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL +FE ++ Q + +P TY +L+ LGK+G+ + A F EM EG P ++
Sbjct: 1274 ALSLFEEMRHQ-YCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMI 1332
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA-MRFELIETLYQDMDERS 245
+ +D+A +M+TL C P V TY+T+IKA ++ R + + ++ M E
Sbjct: 1333 NFLGKAGRLDDAMKLFQEMETL-RCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESG 1391
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
++P++ T +I++ G+ K ++ +L M E P +++ + D+
Sbjct: 1392 ISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGF-PPCPAAYCSLIDALGKAKRYDLA 1450
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+++ + R + ++I GK D ++ + M KL YN ++
Sbjct: 1451 CELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSG 1510
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ G T +M G D ++ ++NG A G H+ + + + + +
Sbjct: 1511 LARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPD 1570
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
V YN V+ A A E ++ K M D T+S + EA K
Sbjct: 1571 VVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGK 1618
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 136/361 (37%), Gaps = 38/361 (10%)
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI-EPTPELYTALL 186
+Q F ++ Y+ TYM L+ L Q K+ EMV I TP + ++
Sbjct: 1097 MQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVV 1156
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
++ +A Q+KT CQP Y+++I + ++E + LY +M
Sbjct: 1157 RMLGNAKMVRQAITIFYQIKTR-KCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMST--- 1212
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
C PD T + ++S F G+ D
Sbjct: 1213 --------------------------------EGHCFPDTVTYSALISAFCKLGRRDSAI 1240
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ + + G+ P T+ + +LI + K S+ E MR TY +I
Sbjct: 1241 QLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGL 1300
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G + F +M EG + DT +IN AG + + L+ +V
Sbjct: 1301 GKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSV 1360
Query: 427 SFYNAVISACIKADDLM-EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
YN +I A ++ E+ ++RMKE P S T+SI+ + + K +K L +
Sbjct: 1361 VTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLE 1420
Query: 486 E 486
E
Sbjct: 1421 E 1421
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 170/358 (47%), Gaps = 3/358 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ +F+ +K + F P + TY LL + GKS +P+ A KV EM G PT Y +L
Sbjct: 282 EAVHLFQQMKLEGF-TPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSL 340
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
++AY + L++EA QM +PDV+TY+TL+ A + + ++ +M
Sbjct: 341 ISAYAKGGLLEEALDLKTQM-VHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVG 399
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN T N ++ +G G F +M +V ++ C PD+ T NT+L+VF G +
Sbjct: 400 CKPNICTFNALIKMHGNRGKFAEMMKVFDD-IKLCNCSPDIVTWNTLLAVFGQNGMDSQV 458
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+++ + G E TFN LI AY + +D+ +V + M + STYN V+ A
Sbjct: 459 SGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAA 518
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ G + E +M K + ++ L++ YAN ++ + + +
Sbjct: 519 LARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVETH 578
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
++ K+D L+E ER + ++ + PD T + M Y ++ M K + +
Sbjct: 579 AVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEI 636
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 171/365 (46%), Gaps = 4/365 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQP-ELARKVFNEMVEEGIEPTPEL 181
++ A+ +F + +Q P TY +L + GK G P + M G+ P
Sbjct: 208 RYRDAVNLFNKM-QQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVEAMRSRGVAPDLYT 266
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y L++ R SL +EA QMK L PD TY+ L+ + R + + Q+M
Sbjct: 267 YNTLISCCRRGSLYEEAVHLFQQMK-LEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEM 325
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ +P +VT N ++ Y K G+ ++ + + M+ KPDV+T T+LS F G+
Sbjct: 326 EANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGI-KPDVFTYTTLLSGFEKAGK 384
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
D + + + R G P TFN LI +G + + +M V + ++ T+N
Sbjct: 385 DDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNT 444
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
++ F G + F++M G A+ TF LI+ Y+ G F + ++ + +
Sbjct: 445 LLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAG 504
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
+ ++S YNAV++A + + E+V M++ C+P+ ++S + AYA +++
Sbjct: 505 VVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKEIERMN 564
Query: 482 ALEQE 486
A +E
Sbjct: 565 AFAEE 569
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 171/406 (42%), Gaps = 78/406 (19%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY LL K+G+ + A +VF EM G +P + AL+ + E
Sbjct: 366 KPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMK 425
Query: 201 TLNQMKTLPNCQPDVYT-----------------------------------YSTLIKAC 225
+ +K L NC PD+ T ++TLI A
Sbjct: 426 VFDDIK-LCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAY 484
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
F+ +Y+ M E V P+ T N VL + G+++Q E+VL+ M E CKP+
Sbjct: 485 SRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEM-EDGRCKPN 543
Query: 286 VWTMNTILSVFANKGQVDMM-----------------------------------ERWYE 310
+ +++L +AN +++ M ER +
Sbjct: 544 ELSYSSLLHAYANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERAFL 603
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
+ R GI P+ T N ++ YG+K+M K ++ +M + +F + +TYN+++ +S
Sbjct: 604 ELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSE 663
Query: 371 DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVS 427
+ + E ++ +GMK D ++ +I Y G ++ + R+ S+++ + +V
Sbjct: 664 NFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNG---RMKEASRIFSEMKDSALVPDVV 720
Query: 428 FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
YN I+ E V + M ++ C+PD T++ + + Y K
Sbjct: 721 TYNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWYCK 766
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 126/273 (46%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
DVY Y+ LI A + R+ L+ M + P +T N+VL YGK GM L
Sbjct: 192 DVYAYTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSNVTAL 251
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
+ S PD++T NT++S + +++ + G P+ T+N L+ +GK
Sbjct: 252 VEAMRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGK 311
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
R + V++ M F TS TYN++I A++ G + QM +G+K D T
Sbjct: 312 SRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFT 371
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+ L++G+ AG I + N+ +NA+I EM +V+ +K
Sbjct: 372 YTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIK 431
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+C PD T++ + + + GM+ +V + +E
Sbjct: 432 LCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKE 464
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 81/200 (40%), Gaps = 1/200 (0%)
Query: 291 TILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
I+ + G+V +N G+ + + LI AY Y ++ M++
Sbjct: 163 VIIKILGKAGRVSSAASLLLALQNDGVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQD 222
Query: 351 QFPWTSSTYNNVIEAFSDMGDA-KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
T TYN V+ + MG ++ E M + G+ D T+ LI+ L+ +
Sbjct: 223 GCNPTLITYNVVLNVYGKMGMPWSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEE 282
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+ + + YNA++ K+ E +V + M+ P S T++ +
Sbjct: 283 AVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLIS 342
Query: 470 AYAKEGMNDKVYALEQEKLQ 489
AYAK G+ ++ L+ + +
Sbjct: 343 AYAKGGLLEEALDLKTQMVH 362
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 179/389 (46%), Gaps = 44/389 (11%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG-IEPTPELYTA 184
+A+ +F +K + QP Y ++++L GQ E +++NEM EG P Y+A
Sbjct: 173 KAVAIFYQIKVRKC-QPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSA 231
Query: 185 LLAAYCRNSLIDEAFVTLNQMKT-------------------LPN--------------- 210
L++A+C+ D A LN+MK L N
Sbjct: 232 LISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQY 291
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
C+PDV+TY+ LI+ A RF+ + +M P+TV N ++ GKAG D
Sbjct: 292 CRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAV 351
Query: 271 RVLSGMLESATCKPDVWTMNTIL-SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
++ M + C P V T NTI+ ++F +K ++ + W+E+ + GI P T++ILI
Sbjct: 352 KLFEEM-GTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILID 410
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT---FEQMHAEG 386
+ K +K ++E M + FP + Y ++I+A +G AK + F+++
Sbjct: 411 GFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDA---LGKAKRYDIAHELFQELKENC 467
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+ + + +I AG ++ +KL NV YNA++S +A L E
Sbjct: 468 GSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEAL 527
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+RM+E C PD +++I+ AK G
Sbjct: 528 TTMRRMQEHGCIPDINSYNIILNGLAKTG 556
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 172/381 (45%), Gaps = 38/381 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ K G+ + A ++ NEM + G++PT ++YT L+A + + + + A
Sbjct: 224 PDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGL 283
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+M+ C+PDV+TY+ LI+ A RF+ + +M P+TV N ++ G
Sbjct: 284 FEEMRH-QYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLG 342
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTIL-SVFANKGQVDMMERWYEKFRNFGIDPE 320
KAG D ++ M + C P V T NTI+ ++F +K ++ + W+E+ + GI P
Sbjct: 343 KAGRLDDAVKLFEEM-GTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPS 401
Query: 321 TRTFNILIGAY-----------------------------------GKKRMYDKMSSVME 345
T++ILI + GK + YD + +
Sbjct: 402 PFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQ 461
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
+++ ++ Y +I+ G F++M+ G + + L++G A AG
Sbjct: 462 ELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAG 521
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ + ++++R + +++ YN +++ K + MK+ +PD+ +++
Sbjct: 522 MLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYN 581
Query: 466 IMTEAYAKEGMNDKVYALEQE 486
+ A + G+ ++ L +E
Sbjct: 582 TVLGAMSHAGLFEEAAKLMKE 602
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 150/348 (43%), Gaps = 4/348 (1%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL +FE ++ Q + +P TY +L+ LGK+G+ + A F+EM EG P + ++
Sbjct: 280 ALGLFEEMRHQ-YCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMI 338
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM-RFELIETLYQDMDERS 245
+ +D+A +M TL C P V TY+T+IKA ++ R I + ++ M
Sbjct: 339 NFLGKAGRLDDAVKLFEEMGTL-QCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSG 397
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
++P+ T +I++ G+ K ++ +L M E P +++ + D+
Sbjct: 398 ISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGF-PPCPAAYCSLIDALGKAKRYDIA 456
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+++ + R + ++I GK D ++ + M KL YN ++
Sbjct: 457 HELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSG 516
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ G T +M G D ++ ++NG A G H+ + + + I +
Sbjct: 517 LARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPD 576
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
YN V+ A A E ++ K M D T+S + EA K
Sbjct: 577 AVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAIGK 624
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 206/460 (44%), Gaps = 32/460 (6%)
Query: 22 PHPHDTKTNKHRAQVPNFNL-IHCSVTSTNKHTSFSSESAVAAKKRLWKEGEYPGVSETS 80
P P + RA PN + I+ SVT S+ E+ + RL T+
Sbjct: 33 PSPKRRLLLQARAAKPNVLIPINPSVTVEKGKYSYDVETLI---NRL-----------TA 78
Query: 81 IPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFY 140
+P S + K KL +N A F + + W ++L++F+ ++ Q +
Sbjct: 79 LPPRGSIARCLDPFKNKLS--------LNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWC 130
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P E + ++ LLG+ G + R+VF+EM G+ T YTA++ AY RN +
Sbjct: 131 KPNEHIHTIMITLLGREGLLDKCREVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLE 190
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACV-DAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
LN MK P + TY+T+I AC + +E + L+ +M + P+ +T N +LG
Sbjct: 191 LLNGMKQ-ERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGA 249
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF---G 316
G+ D+ E V M ES PD+ T + ++ F G+++ +E+ E R G
Sbjct: 250 CAHRGLGDEAEMVFRTMNESGIV-PDINTYSYLVQTF---GKLNRLEKVSELLREMECGG 305
Query: 317 IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME 376
P+ ++N+L+ AY + + V M+ ++TY+ ++ + G +
Sbjct: 306 NLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVR 365
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
F +M D T+ LI + G F +V++ ++ + N+ Y +I AC
Sbjct: 366 DLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFAC 425
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
K + +++ M EK P S+ ++ + EA+ + +
Sbjct: 426 GKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAAL 465
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 166/383 (43%), Gaps = 5/383 (1%)
Query: 97 KLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGK 156
K ER + + NTV + L W L +F ++ + QP TY LL
Sbjct: 196 KQERVSPSILTYNTVINACARGGL--DWEGLLGLFAEMRHEGI-QPDVITYNTLLGACAH 252
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
G + A VF M E GI P Y+ L+ + + + +++ L +M+ N PD+
Sbjct: 253 RGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNL-PDIT 311
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
+Y+ L++A + + +++ M N T +++L YGK G +D + + M
Sbjct: 312 SYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEM 371
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
S T PD T N ++ VF G + + ++P +T+ LI A GK +
Sbjct: 372 KVSNT-DPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGL 430
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
Y+ ++ +M + +S Y VIEAF + F M+ G +T+
Sbjct: 431 YEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNS 490
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
LI+ +A GL+ + + + ++ + +V +N VI A + E + Y M++ +
Sbjct: 491 LIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKAN 550
Query: 457 CRPDSETFSIMTEAYAKEGMNDK 479
C P+ T + Y G+ D+
Sbjct: 551 CEPNELTLEAVLSIYCSAGLVDE 573
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 152/365 (41%), Gaps = 3/365 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A VF + E P TY L+ GK + E ++ EM G P Y L
Sbjct: 258 EAEMVFRTMNESGIV-PDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVL 316
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L AY I EA QM+ C + TYS L+ R++ + L+ +M +
Sbjct: 317 LEAYAELGSIKEAMGVFRQMQA-AGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSN 375
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ T NI++ +G+ G F ++ + M E +P++ T ++ G +
Sbjct: 376 TDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEE-NVEPNMQTYEGLIFACGKGGLYEDA 434
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++ G+ P ++ + +I A+G+ +Y++ + M ++ T TYN++I A
Sbjct: 435 KKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHA 494
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
F+ G K E +M+ G+K D +F +I + G + + + S K N
Sbjct: 495 FARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKANCEPN 554
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
AV+S A + E E ++ +K P + +M YAK + Y L
Sbjct: 555 ELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILPSVMCYCMMLALYAKNDRLNDAYNLID 614
Query: 486 EKLQM 490
+ M
Sbjct: 615 AMITM 619
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 129/259 (49%), Gaps = 3/259 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ GK G E A+K+ M E+G+ P+ + YT ++ A+ + +L +EA V
Sbjct: 412 EPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALV 471
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
N M + P V TY++LI A ++ E + M+E + + + N V+ +
Sbjct: 472 MFNTMNEV-GSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAF 530
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ G +++ + M E A C+P+ T+ +LS++ + G VD E +++ + GI P
Sbjct: 531 RQGGQYEEAVKSYVEM-EKANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILPS 589
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA-FSDMGDAKHMEYTF 379
+ +++ Y K + ++++ M ++ +I+ F D + + +EY F
Sbjct: 590 VMCYCMMLALYAKNDRLNDAYNLIDAMITMRVSDIHQVIGQMIKGDFDDESNWQIVEYVF 649
Query: 380 EQMHAEGMKADTKTFCCLI 398
+++++EG + + L+
Sbjct: 650 DKLNSEGCGLGMRFYNALL 668
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 180/378 (47%), Gaps = 3/378 (0%)
Query: 103 KAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPEL 162
K + +N + F + + W ++L++F+ ++ Q + +P E Y ++ LLG+ G E
Sbjct: 107 KNRLSLNDFSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEK 166
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
++F+EM +G+ + YTAL+ AY RN + + L +MK P++ TY+T+I
Sbjct: 167 CSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKR-ERVSPNILTYNTVI 225
Query: 223 KACVDA-MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
AC + +E + L+ +M V P+ VT N +L G+ D+ E V M+E
Sbjct: 226 NACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGI 285
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
P++ T + I+ F G+++ + ++ + G P+ ++N+LI A+ K +
Sbjct: 286 V-PEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAM 344
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
V + M+ +STY+ ++ + G + F QM + D T+ LI +
Sbjct: 345 DVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVF 404
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
G F +V++ I N+ Y ++ AC K + +++ M K P S
Sbjct: 405 GEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSS 464
Query: 462 ETFSIMTEAYAKEGMNDK 479
+ +S + EAY + + D+
Sbjct: 465 KAYSGLIEAYGQAALYDE 482
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 157/356 (44%), Gaps = 3/356 (0%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
W L +F ++ + QP TY LL G + A VF M+E GI P Y+
Sbjct: 235 WEGLLGLFAEMRHEGV-QPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYS 293
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
++ + + +++ + L +M++ PD+ +Y+ LI+A + +++ M
Sbjct: 294 YIVETFGKLGKLEKVAMLLKEMES-EGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQA 352
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
PN T +I+L YGK G +D + + M ES + +PD T N ++ VF G
Sbjct: 353 AGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKES-SAEPDATTYNILIRVFGEGGYFK 411
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ + + IDP T+ L+ A GK +++ ++ +M +S Y+ +I
Sbjct: 412 EVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLI 471
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
EA+ F M+ G K+ T+ LI+ +A GL+ + + + + I+
Sbjct: 472 EAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGIS 531
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
N ++ +I ++ E + + M++ C D +T + Y G+ D+
Sbjct: 532 RNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDE 587
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 157/364 (43%), Gaps = 3/364 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A VF+ + E P+ TY ++ GK G+ E + EM EG P Y L
Sbjct: 272 EAEMVFKTMIEGGIV-PEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVL 330
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A+ + I EA QM+ C P+ TYS L+ R++ + L+ M E S
Sbjct: 331 IEAHAKLGSIKEAMDVFKQMQA-AGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESS 389
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ T NI++ +G+ G F ++ + +++ P++ T ++ G +
Sbjct: 390 AEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDE-NIDPNMETYEGLVFACGKGGLHEDA 448
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++ GI P ++ ++ LI AYG+ +YD+ M ++ T TYN++I
Sbjct: 449 KKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHT 508
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
F+ G K E +M G+ + K+F +I GY +G + + I + K++ +
Sbjct: 509 FARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELD 568
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
V+ A + E + + +K P + +M YAK G D L
Sbjct: 569 EQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASELLD 628
Query: 486 EKLQ 489
E ++
Sbjct: 629 EMIK 632
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 120/246 (48%), Gaps = 3/246 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ GK G E A+K+ M +GI P+ + Y+ L+ AY + +L DEA V
Sbjct: 427 PNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVA 486
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
N M + + + TY++LI ++ E + M E ++ N + + ++ GY
Sbjct: 487 FNTMNEV-GSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYR 545
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
++G +++ + M E C+ D T+ +L V+ G VD + + + + GI P
Sbjct: 546 QSGQYEEAIKAFVEM-EKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSV 604
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA-FSDMGDAKHMEYTFE 380
+ +++ Y K +D S +++ M K + +I+ + D + + +EY F+
Sbjct: 605 LCYCMMLAVYAKNGRWDDASELLDEMIKTRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFD 664
Query: 381 QMHAEG 386
+++AEG
Sbjct: 665 KLNAEG 670
>gi|168012907|ref|XP_001759143.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689842|gb|EDQ76212.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 165/357 (46%), Gaps = 13/357 (3%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+ +W L+VF ++ Q +Y +G Y KL+V+ GK+ +A +FNE+ G P
Sbjct: 91 QSKWALTLEVFRWMQRQKWYNHDDGFYAKLIVISGKARDLRMAVWLFNEVKRSGSRPDSS 150
Query: 181 LYTALLAAYC----RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
LY AL+ AY + + A +MK P CQP++ TY+ L++A ++
Sbjct: 151 LYNALITAYLHSRDKGRGFEAAMKLFEKMKQKPKCQPNLVTYNILLRASAQLGDVVQVDR 210
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
+++M+ + P+ VT N V+G Y +AG + QME L M KPD T NT++ +
Sbjct: 211 FFKEMEAAKIYPDLVTYNGVIGAYAEAGDYVQMEMTLFVMRIQKHIKPDNVTSNTLIGAY 270
Query: 297 ANKGQVDMMERWYEKFRNF---------GIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
ME+ F P+ +T+N+L+ +Y + + + M M
Sbjct: 271 GRGKDFVKMEQVVSLFTAVLKSMTGSKSKHRPDLKTYNLLMSSYARAQDMENMLWSFSRM 330
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
+ F ++ ++ F +GD + M F QM +K T T +I+ Y F
Sbjct: 331 EEASFKPNFRSFEILMYGFGGVGDFEKMRECFHQMLEASIKPQTSTLNTMISAYCKHNFF 390
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
+ ++ A + QI S Y ++ A + + L +MER+ +RM+ P S +F
Sbjct: 391 EEAEELLKEALEWQIHPRTSSYLIILRAYARDNRLNDMERLIERMRIADVAPVSASF 447
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 129/318 (40%), Gaps = 48/318 (15%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A+++FE +K++P QP TY LL + G + F EM I P Y ++
Sbjct: 172 AMKLFEKMKQKPKCQPNLVTYNILLRASAQLGDVVQVDRFFKEMEAAKIYPDLVTYNGVI 231
Query: 187 AAYCR---------------------------NSLID-----EAFVTLNQMKTLPNC--- 211
AY N+LI + FV + Q+ +L
Sbjct: 232 GAYAEAGDYVQMEMTLFVMRIQKHIKPDNVTSNTLIGAYGRGKDFVKMEQVVSLFTAVLK 291
Query: 212 ---------QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGK 262
+PD+ TY+ L+ + A E + + M+E S PN + I++ G+G
Sbjct: 292 SMTGSKSKHRPDLKTYNLLMSSYARAQDMENMLWSFSRMEEASFKPNFRSFEILMYGFGG 351
Query: 263 AGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETR 322
G F++M MLE A+ KP T+NT++S + + E ++ + I P T
Sbjct: 352 VGDFEKMRECFHQMLE-ASIKPQTSTLNTMISAYCKHNFFEEAEELLKEALEWQIHPRTS 410
Query: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
++ I++ AY + + M ++E MR S+++ +E F G A E +
Sbjct: 411 SYLIILRAYARDNRLNDMERLIERMRIADVAPVSASFLKSLEHF---GLANWSEVQLTES 467
Query: 383 HAEGMKADTKTFCCLING 400
EG+ + L G
Sbjct: 468 TVEGLAEEDDVDVDLFEG 485
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 180/378 (47%), Gaps = 3/378 (0%)
Query: 103 KAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPEL 162
K + +N + F + + W ++L++F+ ++ Q + +P E Y ++ LLG+ G E
Sbjct: 107 KNRLSLNDFSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEK 166
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
++F+EM +G+ + YTAL+ AY RN + + L +MK P++ TY+T+I
Sbjct: 167 CSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKR-ERVSPNILTYNTVI 225
Query: 223 KACVDA-MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
AC + +E + L+ +M V P+ VT N +L G+ D+ E V M+E
Sbjct: 226 NACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGI 285
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
P++ T + I+ F G+++ + ++ + G P+ ++N+LI A+ K +
Sbjct: 286 V-PEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAM 344
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
V + M+ +STY+ ++ + G + F QM + D T+ LI +
Sbjct: 345 DVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVF 404
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
G F +V++ I N+ Y ++ AC K + +++ M K P S
Sbjct: 405 GEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSS 464
Query: 462 ETFSIMTEAYAKEGMNDK 479
+ +S + EAY + + D+
Sbjct: 465 KAYSGLIEAYGQAALYDE 482
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 157/356 (44%), Gaps = 3/356 (0%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
W L +F ++ + QP TY LL G + A VF M+E GI P Y+
Sbjct: 235 WEGLLGLFAEMRHEGV-QPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYS 293
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
++ + + +++ + L +M++ PD+ +Y+ LI+A + +++ M
Sbjct: 294 YIVETFGKLGKLEKVAMLLKEMES-EGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQA 352
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
PN T +I+L YGK G +D + + M ES + +PD T N ++ VF G
Sbjct: 353 AGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKES-SAEPDATTYNILIRVFGEGGYFK 411
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ + + IDP T+ L+ A GK +++ ++ +M +S Y+ +I
Sbjct: 412 EVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLI 471
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
EA+ F M+ G K+ T+ LI+ +A GL+ + + + + I+
Sbjct: 472 EAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGIS 531
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
N ++ +I ++ E + + M++ C D +T + Y G+ D+
Sbjct: 532 RNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDE 587
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 157/364 (43%), Gaps = 3/364 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A VF+ + E P+ TY ++ GK G+ E + EM EG P Y L
Sbjct: 272 EAEMVFKTMIEGGIV-PEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVL 330
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A+ + I EA QM+ C P+ TYS L+ R++ + L+ M E S
Sbjct: 331 IEAHAKLGSIKEAMDVFKQMQA-AGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESS 389
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ T NI++ +G+ G F ++ + +++ P++ T ++ G +
Sbjct: 390 AEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDE-NIDPNMETYEGLVFACGKGGLHEDA 448
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++ GI P ++ ++ LI AYG+ +YD+ M ++ T TYN++I
Sbjct: 449 KKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHT 508
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
F+ G K E +M G+ + K+F +I GY +G + + I + K++ +
Sbjct: 509 FARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELD 568
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
V+ A + E + + +K P + +M YAK G D L
Sbjct: 569 EQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASELLD 628
Query: 486 EKLQ 489
E ++
Sbjct: 629 EMIK 632
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 120/246 (48%), Gaps = 3/246 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ GK G E A+K+ M +GI P+ + Y+ L+ AY + +L DEA V
Sbjct: 427 PNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVA 486
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
N M + + + TY++LI ++ E + M E ++ N + + ++ GY
Sbjct: 487 FNTMNEV-GSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYR 545
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
++G +++ + M E C+ D T+ +L V+ G VD + + + + GI P
Sbjct: 546 QSGQYEEAIKAFVEM-EKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSV 604
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA-FSDMGDAKHMEYTFE 380
+ +++ Y K +D S +++ M K + +I+ + D + + +EY F+
Sbjct: 605 LCYCMMLAVYAKNGRWDDASELLDEMIKTRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFD 664
Query: 381 QMHAEG 386
+++AEG
Sbjct: 665 KLNAEG 670
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 183/380 (48%), Gaps = 13/380 (3%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
A+ +F+ L + +P E Y ++ L K G E + M + +P Y+ +
Sbjct: 150 DAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIV 209
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A C++ +D A LN+MK N P+++TY++LI ++E ++TL +M +
Sbjct: 210 IDALCKDINLDAAINLLNEMKQ-KNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLN 268
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ PN T +I++ G K G + + V+ M+E +PD+ T + I+ + +GQVD
Sbjct: 269 INPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGV-EPDIITYSAIMDGYCLRGQVDRA 327
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
R + R+ GI P +++ILI Y KK+ K + + + + TY+ ++
Sbjct: 328 RRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHG 387
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE- 424
++G + F++M G D L+ GY GL + ++ L SKL+
Sbjct: 388 LIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEE---AMLLFSKLERNRE 444
Query: 425 --NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
N+SFY VI+ K D + E +++++ PD T+++M + +EG+ D+V
Sbjct: 445 DTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKG 504
Query: 483 LEQEKLQMLLEASGHWQQNI 502
+ ++ +E +G NI
Sbjct: 505 ILRK-----MEDNGCPANNI 519
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 126/294 (42%), Gaps = 37/294 (12%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
P T+ L+ L K G+ E A +V M+E+G+EP Y+A++ YC +D A
Sbjct: 270 NPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARR 329
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
N ++ +P++++YS LI L+ ++ ++ + P+TVT + +L G
Sbjct: 330 VFNVLRD-KGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGL 388
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD-------MMER------ 307
+ G +++ ML PD+ +T+L + G V+ +ER
Sbjct: 389 IEVGRIGDAKKIFDEMLRVGP-TPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTN 447
Query: 308 ----------------------WYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
+EK + G+ P+ RT+N++I + ++ ++D++ ++
Sbjct: 448 ISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILR 507
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
M P + TYN +++ F + ++M G D T LIN
Sbjct: 508 KMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLIN 561
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 139/329 (42%), Gaps = 2/329 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L K GQ E + + +EMV I P ++ L+ C+ +++A
Sbjct: 236 PNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEV 295
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ M +PD+ TYS ++ + + ++ + ++ + PN + +I++ GY
Sbjct: 296 MRHMIE-KGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYC 354
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K + + L G + KPD T +TIL G++ ++ +++ G P+
Sbjct: 355 KKKNLAKAMQ-LFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDI 413
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+ L+ Y K + ++ + + + + S Y VI + FE+
Sbjct: 414 CLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEK 473
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
+ + G+ D +T+ +I G+ GLF +V +R N YN ++ +++
Sbjct: 474 LPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNK 533
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEA 470
+ E+ K M + D+ T ++
Sbjct: 534 ISEIVSFMKEMAGRGFSFDATTTGVLINV 562
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 132/312 (42%), Gaps = 5/312 (1%)
Query: 166 VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLN-QMKTLPNCQPDVYTYSTLIKA 224
+F EM GI + + + +YC ID AF L +KT +V T++TL+
Sbjct: 84 LFREMRILGIPISDSILNIVTNSYCLRHRIDCAFSVLPIYLKT--GIPFNVVTFNTLLGG 141
Query: 225 CVDAMRFELIETLYQDM-DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK 283
+ L++ + E+ PN V V+ G K G ++ +L ++E K
Sbjct: 142 LFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLR-IMEQGNTK 200
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
PDV T + ++ +D + + I P T+N LI K ++K+ ++
Sbjct: 201 PDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTL 260
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ M L T++ +I+ G + + M +G++ D T+ +++GY
Sbjct: 261 LSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCL 320
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
G + + I N+ Y+ +I+ K +L + +++ + +K +PD+ T
Sbjct: 321 RGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVT 380
Query: 464 FSIMTEAYAKEG 475
+S + + G
Sbjct: 381 YSTILHGLIEVG 392
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/306 (19%), Positives = 126/306 (41%), Gaps = 1/306 (0%)
Query: 171 VEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMR 230
++ GI + LL + + +A V ++ C+P+ Y T++
Sbjct: 124 LKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGH 183
Query: 231 FELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMN 290
E +L + M++ + P+ T +IV+ K D +L+ M + P+++T N
Sbjct: 184 TEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEM-KQKNIPPNIFTYN 242
Query: 291 TILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
+++ GQ + ++ + N I+P TF+ILI K+ + VM +M +
Sbjct: 243 SLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEK 302
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
TY+ +++ + G F + +G+K + ++ LINGY K
Sbjct: 303 GVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKA 362
Query: 411 ISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
+ S+ + + Y+ ++ I+ + + ++++ M PD S +
Sbjct: 363 MQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFG 422
Query: 471 YAKEGM 476
Y K G+
Sbjct: 423 YFKYGL 428
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 86/215 (40%), Gaps = 1/215 (0%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P V + + N + + + R GI NI+ +Y + D SV
Sbjct: 60 PSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVTNSYCLRHRIDCAFSV 119
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM-KADTKTFCCLINGYA 402
+ K P+ T+N ++ F+++ E + + + + ++NG +
Sbjct: 120 LPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLS 179
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
G K +S +R+ + +V Y+ VI A K +L + MK+K+ P+
Sbjct: 180 KRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIF 239
Query: 463 TFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
T++ + + K G +KV L E + + + + H
Sbjct: 240 TYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVH 274
>gi|449525698|ref|XP_004169853.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Cucumis sativus]
Length = 494
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 183/385 (47%), Gaps = 6/385 (1%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+ +W + L+VF +++Q +Y G Y KL+ ++GK GQ +A +F+EM G P
Sbjct: 104 RDKWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTS 163
Query: 181 LYTALLAAYCRNSLIDEAFVTL----NQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
+Y AL+ A+ + +A V + +MK + C+P++ TY+ L +A A + + + T
Sbjct: 164 VYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNT 223
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
L++D+DE V+ + T N V+ YGK G +ME +L+ M +S KPD+ + N ++ +
Sbjct: 224 LFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARM-KSNQIKPDIISFNLLIDSY 282
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
K D ME+ ++ P TFN +I YGK R+ +K V M+ + + +
Sbjct: 283 GKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSY 342
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
T ++I + F+ M G + T +++ Y GL +
Sbjct: 343 VTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFES 402
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
A +++ + + Y + A KAD +E++ K M + P+ F
Sbjct: 403 AGNMRVFPDSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQE 462
Query: 477 NDKVYALEQ-EKLQMLLEASGHWQQ 500
N + LEQ ++ Q+++ + H Q+
Sbjct: 463 NQNLQELEQVQETQIVVWKNSHLQE 487
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 182/361 (50%), Gaps = 9/361 (2%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+A+ +F EM++ +QP +Y ++ L KSG +A ++ +M E+G +P YT
Sbjct: 180 EAVGLFNEMVRRG--HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTT 237
Query: 185 LLAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
++ + C+++L+++A L++M + +P PDV TYST++ L+ +M
Sbjct: 238 IIDSLCKDTLVNDAMDLLSEMVDRGIP---PDVVTYSTILHGFCSLGHLNEATILFNEMV 294
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
R+V PNTVT I++ G K GM + V M + +P+ +T N ++ + Q+
Sbjct: 295 GRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGA-EPNAYTYNALMDGYCLNNQM 353
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
D ++ + + G P ++NILI Y K+R D+ S++ M + + + TY+ +
Sbjct: 354 DEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTL 413
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
++ +G + F++M + G+ D T+ L++G G + + ++ + +I
Sbjct: 414 MQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKI 473
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
++ YN +I A L + ++ ++ +P T++IM + KEG++D+ Y
Sbjct: 474 EPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYE 533
Query: 483 L 483
L
Sbjct: 534 L 534
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 133/322 (41%), Gaps = 2/322 (0%)
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
A V +M + GI+P + L+ C I EA N+M + QPDV +YST+
Sbjct: 145 FAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGH-QPDVISYSTV 203
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
I + + L + M+E+ PN V ++ K + + +LS M++
Sbjct: 204 INGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGI 263
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
PDV T +TIL F + G ++ + + + P T TF IL+ K+ M +
Sbjct: 264 -PPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEAR 322
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
V E M K + TYN +++ + + + M +G ++ LINGY
Sbjct: 323 CVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGY 382
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
+ S + S+ ++ + Y+ ++ + E ++K M PD
Sbjct: 383 CKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDL 442
Query: 462 ETFSIMTEAYAKEGMNDKVYAL 483
T+S + + K G D+ L
Sbjct: 443 MTYSTLLDGLCKHGHLDEALKL 464
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 169/421 (40%), Gaps = 12/421 (2%)
Query: 60 AVAAKKRLWKEGEYPGVSE--TSIPGY-RSKRTPIK-NLKKKLERKAKAKAWV--NTVAE 113
AV + + G P V T I G +S T + L +K+E K V T+ +
Sbjct: 181 AVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIID 240
Query: 114 TFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE 173
+ L L EM+ P TY +L G A +FNEMV
Sbjct: 241 SLCKDTLVNDAMDLLS--EMVDRG--IPPDVVTYSTILHGFCSLGHLNEATILFNEMVGR 296
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
+ P +T L+ C+ ++ EA M T +P+ YTY+ L+ + +
Sbjct: 297 NVMPNTVTFTILVDGLCKEGMVSEARCVFEAM-TKKGAEPNAYTYNALMDGYCLNNQMDE 355
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
+ + M ++ P + NI++ GY K D+ + +L M E PD T +T++
Sbjct: 356 AQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKEL-TPDTVTYSTLM 414
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
G+ +++ + G+ P+ T++ L+ K D+ +++ M++ +
Sbjct: 415 QGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIE 474
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
YN +IE G + + F ++ A+G++ +T+ +I G GL +
Sbjct: 475 PDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYEL 534
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
R N YN +I ++ D R+ M K DS TF ++ + ++
Sbjct: 535 FRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLDLESR 594
Query: 474 E 474
+
Sbjct: 595 D 595
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 124/326 (38%), Gaps = 35/326 (10%)
Query: 195 IDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQN 254
ID+A + +M + N +P V + + + ++ + +L MD VT N + N
Sbjct: 73 IDDALASFYRMLRM-NPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 131
Query: 255 I----------------VLGGYGKAGM------FDQM--ERVLSGMLESATC-------- 282
I VLG K G+ F+ + R + G ++ A
Sbjct: 132 ILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRR 191
Query: 283 --KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
+PDV + +T+++ G M + K G P + +I + K + +
Sbjct: 192 GHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDA 251
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
++ M P TY+ ++ F +G F +M + +T TF L++G
Sbjct: 252 MDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDG 311
Query: 401 YANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
G+ + +K N YNA++ + + E ++V M +K C P
Sbjct: 312 LCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPV 371
Query: 461 SETFSIMTEAYAKEGMNDKVYALEQE 486
+++I+ Y K D+ +L E
Sbjct: 372 VHSYNILINGYCKRRRLDEAKSLLVE 397
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 179/389 (46%), Gaps = 44/389 (11%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG-IEPTPELYTA 184
QA+ +F +K + QP Y ++++L GQ E +++NEM EG P Y+A
Sbjct: 144 QAITIFYQIKTRKC-QPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSA 202
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTL---PN------------------------------- 210
L++A+C+ D A LN+MK + P
Sbjct: 203 LISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQY 262
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
C+PDV+TY+ LI+ A R + + +M P+TV N ++ GKAG D
Sbjct: 263 CRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAM 322
Query: 271 RVLSGMLESATCKPDVWTMNTIL-SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
++ M E+ C P V T NTI+ ++F +K + + W+E+ + GI P + T++ILI
Sbjct: 323 KLFQEM-ETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILID 381
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT---FEQMHAEG 386
+ K +K ++E M + FP + Y ++I+A +G AK + F+++
Sbjct: 382 GFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDA---LGKAKRYDLACELFQELKENC 438
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+ + + +I AG I+ +KL A +V YNA++S + L E
Sbjct: 439 GSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEAL 498
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+RM+E C PD +++I+ AK G
Sbjct: 499 STMRRMQEHGCIPDINSYNIILNGLAKTG 527
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 177/400 (44%), Gaps = 38/400 (9%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
Q+ + Q++ + + P TY L+ K G+ + A ++ NEM E G++PT ++Y
Sbjct: 176 QYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIY 235
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
T L+A + + + A +M+ C+PDV+TY+ LI+ A R + + +M
Sbjct: 236 TMLIALFFKFNDAHGALSLFEEMRH-QYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQ 294
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL-SVFANKGQ 301
P+TV N ++ GKAG D ++ M E+ C P V T NTI+ ++F +K +
Sbjct: 295 REGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEM-ETLRCIPSVVTYNTIIKALFESKSR 353
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAY------------------------------ 331
+ W+E+ + GI P + T++ILI +
Sbjct: 354 ASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCS 413
Query: 332 -----GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
GK + YD + + +++ ++ Y +I+ G F++M+ G
Sbjct: 414 LIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLG 473
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
D + L++G A G+ + +S++R + +++ YN +++ K
Sbjct: 474 CAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAM 533
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ MK+ RPD +++ + A + GM ++ L +E
Sbjct: 534 EMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKE 573
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 152/348 (43%), Gaps = 4/348 (1%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL +FE ++ Q + +P TY +L+ LGK+G+ + A F EM EG P ++
Sbjct: 251 ALSLFEEMRHQ-YCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMI 309
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM-RFELIETLYQDMDERS 245
+ +D+A +M+TL C P V TY+T+IKA ++ R + + ++ M E
Sbjct: 310 NFLGKAGRLDDAMKLFQEMETL-RCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESG 368
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
++P++ T +I++ G+ K ++ +L M E P +++ + D+
Sbjct: 369 ISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGF-PPCPAAYCSLIDALGKAKRYDLA 427
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+++ + R + ++I GK D ++ + M KL YN ++
Sbjct: 428 CELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSG 487
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ G T +M G D ++ ++NG A G H+ + + + + +
Sbjct: 488 LARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPD 547
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
V YN V+ A A E ++ K M D T+S + EA K
Sbjct: 548 VVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGK 595
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 136/361 (37%), Gaps = 38/361 (10%)
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI-EPTPELYTALL 186
+Q F ++ Y+ TYM L+ L Q K+ EMV I TP + ++
Sbjct: 74 MQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVV 133
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
++ +A Q+KT CQP Y+++I + ++E + LY +M
Sbjct: 134 RMLGNAKMVRQAITIFYQIKT-RKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMST--- 189
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
C PD T + ++S F G+ D
Sbjct: 190 --------------------------------EGHCFPDTVTYSALISAFCKLGRRDSAI 217
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ + + G+ P T+ + +LI + K S+ E MR TY +I
Sbjct: 218 QLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGL 277
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G + F +M EG + DT +IN AG + + L+ +V
Sbjct: 278 GKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSV 337
Query: 427 SFYNAVISACIKADDLM-EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
YN +I A ++ E+ ++RMKE P S T+SI+ + + K +K L +
Sbjct: 338 VTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLE 397
Query: 486 E 486
E
Sbjct: 398 E 398
>gi|168045490|ref|XP_001775210.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673423|gb|EDQ59946.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 404
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 168/364 (46%), Gaps = 11/364 (3%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+ W L+VF K+Q +Y P Y +L+ LG+ G+ A +F EM+ E +
Sbjct: 23 QHDWRCTLEVFSWSKKQSWYCPNSRLYTRLIGFLGREGRVHNATLLFQEMLLEKCQADQY 82
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMK--TLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
YTAL+ AY + + +EA + MK PNCQP+ T + LI A V ++ ++
Sbjct: 83 TYTALVNAYGKAKMFEEALAVFSHMKESNEPNCQPNTVTCNALIDALVKGGLYDQAIQVF 142
Query: 239 QDMD------ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT---CKPDVWTM 289
DM E PN +T N+++ K G+ D +VL M + T +P+ T
Sbjct: 143 FDMRDGTNGLEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQYMRDGNTDQSVQPNSATY 202
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
NT+++ G + E + G+ P+ T+ LI AYGK +++ + + M+
Sbjct: 203 NTLINACGKGGLYEKAEELVDLMVEHGVQPDHITYTALIDAYGKAGLWENAENTFKGMKG 262
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
Y +I+A+ G + E F+ M G++ + T+ L+ Y AGL +
Sbjct: 263 TNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMMQHSGLRPNQVTYLSLMEAYGKAGLPEE 322
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+ + + NV Y+++I A KA + +E R+ M+ C+P+ T+S +
Sbjct: 323 SRNVFNIMRESGYEGNVLIYSSLIDAYGKAGNYLEAARMLDMMRRAGCQPNLITYSAILS 382
Query: 470 AYAK 473
+ K
Sbjct: 383 SCCK 386
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 140/311 (45%), Gaps = 13/311 (4%)
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
P LYT L+ R + A + +M L CQ D YTY+ L+ A A FE
Sbjct: 44 PNSRLYTRLIGFLGREGRVHNATLLFQEM-LLEKCQADQYTYTALVNAYGKAKMFEEALA 102
Query: 237 LYQDM---DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT-----CKPDVWT 288
++ M +E + PNTVT N ++ K G++DQ +V M + C+P+V T
Sbjct: 103 VFSHMKESNEPNCQPNTVTCNALIDALVKGGLYDQAIQVFFDMRDGTNGLEHGCEPNVIT 162
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGID----PETRTFNILIGAYGKKRMYDKMSSVM 344
N ++ +G +D+ + + R+ D P + T+N LI A GK +Y+K ++
Sbjct: 163 YNVLIDALCKEGLLDIGMKVLQYMRDGNTDQSVQPNSATYNTLINACGKGGLYEKAEELV 222
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
+ M + TY +I+A+ G ++ E TF+ M + D + +I+ Y
Sbjct: 223 DLMVEHGVQPDHITYTALIDAYGKAGLWENAENTFKGMKGTNVSVDVMAYTAMIDAYGRE 282
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
GL+ K ++ + N Y +++ A KA E V+ M+E + +
Sbjct: 283 GLYQKAEEMFKMMQHSGLRPNQVTYLSLMEAYGKAGLPEESRNVFNIMRESGYEGNVLIY 342
Query: 465 SIMTEAYAKEG 475
S + +AY K G
Sbjct: 343 SSLIDAYGKAG 353
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 179/374 (47%), Gaps = 15/374 (4%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A QVF+ +K F +P + T+ LL + GK+ + E A V M G P+ Y +L
Sbjct: 273 EAAQVFDEMKAAGF-EPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSL 331
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
++AY ++ L++EA L Q +PDV TY+TLI + + Y +M
Sbjct: 332 ISAYVKDGLLEEAL-ELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNG 390
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+PN T N ++ +G G F +M V L SA PDV T NT+LSVF G +
Sbjct: 391 CSPNLCTYNALIKLHGVRGKFTEMMAVFDD-LRSAGYVPDVVTWNTLLSVFGQNGLDSEV 449
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+++ + G PE T+ LI +Y + ++D+ + + M + STYN V+ A
Sbjct: 450 SGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSA 509
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ G + E F +M K D ++ L++ YANA K + ++ S+ AE
Sbjct: 510 LARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANA----KKLDKMKTLSEDIYAER 565
Query: 426 VSFYNAVISACI----KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
+ +N ++ + K ++L E E+ ++ ++ + C D + M Y K M KV
Sbjct: 566 IERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKV- 624
Query: 482 ALEQEKLQMLLEAS 495
+E L +++E S
Sbjct: 625 ---EEVLSLMMENS 635
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 163/379 (43%), Gaps = 34/379 (8%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P Y L+ ++G+ A VF MV+ G++P Y + AY + S+ + V
Sbjct: 182 PDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVA 241
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L + D YTY+TLI C ++ +M P+ VT N +L YG
Sbjct: 242 LVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYG 301
Query: 262 KA-------GMFDQMER-----------------VLSGMLESAT----------CKPDVW 287
KA G+ +ME V G+LE A KPDV
Sbjct: 302 KARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVV 361
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T T++S G++D Y + G P T+N LI +G + + +M +V + +
Sbjct: 362 TYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDL 421
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
R + T+N ++ F G + F++M G + T+ LI+ Y+ GLF
Sbjct: 422 RSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 481
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ + + + I ++S YNAV+SA + + E+++ M ++ C+PD ++S +
Sbjct: 482 DQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSL 541
Query: 468 TEAYAKEGMNDKVYALEQE 486
AYA DK+ L ++
Sbjct: 542 LHAYANAKKLDKMKTLSED 560
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 174/361 (48%), Gaps = 9/361 (2%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H ++ ++ + + VF+ L+ Y P T+ LL + G++G VF EM + G P
Sbjct: 405 HGVRGKFTEMMAVFDDLRSAG-YVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIP 463
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
+ Y +L+++Y R L D+A +M PD+ TY+ ++ A R+E E L
Sbjct: 464 ERDTYVSLISSYSRCGLFDQAMEIYKRM-IEAGIYPDISTYNAVLSALARGGRWEQAEKL 522
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
+ +M +R P+ ++ + +L Y A D+M + LS + + + W + T++ V
Sbjct: 523 FAEMVDRDCKPDELSYSSLLHAYANAKKLDKM-KTLSEDIYAERIERHNWLVKTLVLVNN 581
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+ E+ +++ R + N ++ YGK +M K+ V+ M + +++
Sbjct: 582 KVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAA 641
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
TYN+++ +S +GD + E ++ + GM+ D ++ +I Y G ++ + RL
Sbjct: 642 TYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKG---QMKEASRLF 698
Query: 418 SKLQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
S+++ + ++ YN I + + E + + + + CRP+ TF+ + + Y++
Sbjct: 699 SEMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYSRH 758
Query: 475 G 475
G
Sbjct: 759 G 759
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 154/352 (43%), Gaps = 10/352 (2%)
Query: 129 QVFEMLKEQPF--YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+ E+ +E F +P TY L+ L + G+ + A ++EMV G P Y AL+
Sbjct: 343 EALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALI 402
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+ E + +++ PDV T++TL+ + ++++M +
Sbjct: 403 KLHGVRGKFTEMMAVFDDLRS-AGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGY 461
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P T ++ Y + G+FDQ + M+E A PD+ T N +LS A G+ + E
Sbjct: 462 IPERDTYVSLISSYSRCGLFDQAMEIYKRMIE-AGIYPDISTYNAVLSALARGGRWEQAE 520
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME--YMRKLQ-FPWTSSTYNNVI 363
+ + + + P+ +++ L+ AY + DKM ++ E Y +++ W T ++
Sbjct: 521 KLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKT---LV 577
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
+ + + E F+++ D +++ Y + KV + L + I
Sbjct: 578 LVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSIN 637
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + YN+++ + D + E + +K RPD +++ + AY ++G
Sbjct: 638 HSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKG 689
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 104/231 (45%), Gaps = 6/231 (2%)
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ +AG + S +LE+A PD ++S F+ G+ +++ + G+ P
Sbjct: 163 FARAGCLAEA----SAILEAAPA-PDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQP 217
Query: 320 ETRTFNILIGAYGKKRM-YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
T+N++ AY K + + ++ ++++ M++ TYN +I G +
Sbjct: 218 ALVTYNVVFHAYSKMSVPWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQV 277
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
F++M A G + D TF L++ Y A + I ++ +V YN++ISA +K
Sbjct: 278 FDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVK 337
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
L E + + M+ + +PD T++ + + G D A E ++
Sbjct: 338 DGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVR 388
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 1/132 (0%)
Query: 145 GTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQ 204
TY L+ + + G E + E+ G+ P Y ++ AY R + EA ++
Sbjct: 641 ATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSE 700
Query: 205 MKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG 264
MK +PD+ TY+ IK+ V + FE L + + + PN T N +L GY + G
Sbjct: 701 MKC-SGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYSRHG 759
Query: 265 MFDQMERVLSGM 276
+ + LS +
Sbjct: 760 RMVEAKSFLSNL 771
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 169/358 (47%), Gaps = 3/358 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A + F LK Q Y P TY LL + GK+G A + EM + P Y L
Sbjct: 298 EAKEFFVGLKSQG-YAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNEL 356
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+AAY R +E ++ M T +P+ TY+T+I A A + + +LY M E
Sbjct: 357 VAAYVRAGFYEEGAALIDTM-TENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESG 415
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN T N +LG GK ++M ++L M + C P+ T NT+LS+ NKG +
Sbjct: 416 CAPNVCTYNAILGMLGKKSQSEEMMKILCDM-KVDGCAPNRITWNTMLSMCGNKGMHKYV 474
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+R +++ ++ G +P+ TFN LI A G+ + + M + F + +TYN ++ A
Sbjct: 475 KRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNA 534
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ GD + E + M +G K ++ ++N YA G + + I +
Sbjct: 535 LARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPS 594
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+I A K L MER ++ +++ +PD F+ M ++++ M+D+ + +
Sbjct: 595 WMLLRTLILANFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEI 652
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 145/333 (43%), Gaps = 4/333 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR-NSLIDEAFV 200
P T+ +L + G G + ++VF EM G EP + + L+ A R S ID +
Sbjct: 453 PNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKI 512
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
++ P V TY+ L+ A + E++ +DM + P+ + +++L Y
Sbjct: 513 YDEMLEA--GFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSY 570
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + R+ + + + IL+ F + M ER ++ + G P+
Sbjct: 571 AKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAGM-ERAFQALQKHGYKPD 629
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
FN ++ + +K M+D+ +M +++ TYN++++ ++ G+ E
Sbjct: 630 LVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEILR 689
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
++ G K+D ++ +I G+ GL H+ + ++ I + YN +
Sbjct: 690 ELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIRPCIVTYNTFVGGYAAKG 749
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
E++ V M + CRP+ T+ I+ + Y K
Sbjct: 750 MFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCK 782
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 145/310 (46%), Gaps = 10/310 (3%)
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
EL +L ++S+ + F + L + DV Y+T++ + ++E +++
Sbjct: 178 ELMARILGRESQHSIASKLFDVI----PLDDYSLDVRAYTTILHSYSRCGKYERAVAIFE 233
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP---DVWTMNTILSVF 296
M+E ++P VT N++L YGK G ++L G+L+ K D +T +T++S
Sbjct: 234 KMNESGLSPTLVTYNVMLDVYGKMGR--SWNKIL-GLLDEMRSKGLGFDEFTCSTVISAC 290
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
+G +D + ++ ++ G P T T+N L+ +GK +Y + S+M+ M P +
Sbjct: 291 GREGLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDA 350
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
TYN ++ A+ G + + M G+K + T+ +IN Y A K +S
Sbjct: 351 VTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQ 410
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ A NV YNA++ K EM ++ MK C P+ T++ M +GM
Sbjct: 411 MKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGM 470
Query: 477 NDKVYALEQE 486
+ V + QE
Sbjct: 471 HKYVKRVFQE 480
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 153/376 (40%), Gaps = 47/376 (12%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY ++ G++ Q + A ++++M E G P Y A+L + S +E
Sbjct: 382 KPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMK 441
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L MK + C P+ T++T++ C + + ++ ++Q+M P+ T N ++
Sbjct: 442 ILCDMK-VDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITAS 500
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
G+ G E++ MLE A P V T N +L+ A +G E + +N G P
Sbjct: 501 GRCGSDIDAEKIYDEMLE-AGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPS 559
Query: 321 TRTFNILIGAYGK-----------KRMYDK------------------------MSSVME 345
++++++ +Y K K +YD M +
Sbjct: 560 ETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAGMERAFQ 619
Query: 346 YMRKLQFPWTSSTYNNVIEAFS--DMGDAKHMEYTFEQMHAE---GMKADTKTFCCLING 400
++K + +N+++ FS +M D H E MH G++ D T+ L++
Sbjct: 620 ALQKHGYKPDLVVFNSMLSMFSRKNMHDRAH-----EIMHLIQECGLQPDLVTYNSLMDL 674
Query: 401 YANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
YA G K +R ++ YN VI + + E R M + RP
Sbjct: 675 YARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIRPC 734
Query: 461 SETFSIMTEAYAKEGM 476
T++ YA +GM
Sbjct: 735 IVTYNTFVGGYAAKGM 750
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 167/379 (44%), Gaps = 34/379 (8%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P G Y L+ ++G+ A VF MV+ G++P Y +L Y + ++ + V
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 229
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L PD YTY+TLI C ++ ++ +M P+ VT N +L YG
Sbjct: 230 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 289
Query: 262 KAGMFDQ-------MERV-----------------LSGMLESATC----------KPDVW 287
KA D+ MERV G+LE A KPDV
Sbjct: 290 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVV 349
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T T++S G++D Y++ G P T+N LI +G + + +M +V + +
Sbjct: 350 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEL 409
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
R F T+N ++ F G + F++M G + T+ LI+ Y+ GLF
Sbjct: 410 RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 469
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ + + I +VS YNAV+SA + + E+++ M+E+ C+PD ++S +
Sbjct: 470 DLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSL 529
Query: 468 TEAYAKEGMNDKVYALEQE 486
AYA DK+ AL +
Sbjct: 530 LHAYANAKRLDKMKALSDD 548
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 180/375 (48%), Gaps = 16/375 (4%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A QVF+ +K F +P + T+ LL + GK+ + + A +V EM G P+ Y +L
Sbjct: 261 EAAQVFDEMKASGF-EPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSL 319
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+++Y ++ L+++A V L Q + +PDV TY+TLI A + + Y +M
Sbjct: 320 ISSYVKDGLLEQA-VALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNG 378
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN T N ++ +G G F +M V L SA PD+ T NT+L+VF G +
Sbjct: 379 CKPNLCTYNALIKMHGVRGKFPEMMAVFDE-LRSAGFVPDIVTWNTLLAVFGQNGLDSEV 437
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+++ + G PE T+ LI +Y + ++D + + M + STYN V+ A
Sbjct: 438 SGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSA 497
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ G + E F +M K D ++ L++ YANA K + ++ S +E
Sbjct: 498 LARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANA----KRLDKMKALSDDIYSER 553
Query: 426 VSFYNAVISACI----KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
+ +N ++ + K ++L E E+ + +++K C D + M Y K M KV
Sbjct: 554 IEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKV- 612
Query: 482 ALEQEKLQMLLEASG 496
EK+ L++ S
Sbjct: 613 ----EKILSLMKESA 623
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 174/361 (48%), Gaps = 9/361 (2%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H ++ ++ + + VF+ L+ F P T+ LL + G++G VF EM + G P
Sbjct: 393 HGVRGKFPEMMAVFDELRSAGFV-PDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIP 451
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
+ Y +L+++Y R L D A +M PDV TY+ ++ A R+E E L
Sbjct: 452 ERDTYVSLISSYSRCGLFDLAMQIYKRMME-AGIYPDVSTYNAVLSALARGGRWEQAEKL 510
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
+ +M+ER P+ + + +L Y A D+M + LS + S +P W + T++ V +
Sbjct: 511 FAEMEERDCKPDEYSYSSLLHAYANAKRLDKM-KALSDDIYSERIEPHNWLVKTLVLVNS 569
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+ E+ + + R + N ++ YGK RM K+ ++ M++ +++
Sbjct: 570 KVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAA 629
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
TYN+++ +S +GD + E ++ + G++ D ++ +I Y G ++ + RL
Sbjct: 630 TYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKG---QMKEASRLF 686
Query: 418 SKLQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
S+++ + +V YN + + + E + + M + C+P+ T++ + E Y +
Sbjct: 687 SEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRN 746
Query: 475 G 475
G
Sbjct: 747 G 747
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 164/388 (42%), Gaps = 44/388 (11%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A++V + + E+ P TY L+ K G E A + EM +GI+P YT L
Sbjct: 296 EAIEVIQEM-ERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTL 354
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
++ R ID A V ++M C+P++ TY+ LIK +F + ++ ++
Sbjct: 355 ISGLDRAGKIDAAIVEYDEM-VRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAG 413
Query: 246 VTPNTVTQNIVLGGYG-----------------------------------KAGMFDQME 270
P+ VT N +L +G + G+FD
Sbjct: 414 FVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAM 473
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
++ M+E A PDV T N +LS A G+ + E+ + + P+ +++ L+ A
Sbjct: 474 QIYKRMME-AGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHA 532
Query: 331 YGKKRMYDKMSSVME--YMRKLQ-FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
Y + DKM ++ + Y +++ W T V +++ +A E F ++ +
Sbjct: 533 YANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEA---EKAFLELRQKRC 589
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
D +++ Y + KV + L + I + + YN+++ + D + E
Sbjct: 590 SLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCEN 649
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ +K RPD +++ + AY ++G
Sbjct: 650 ILTEIKSSGVRPDRYSYNTVIYAYGRKG 677
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 173/354 (48%), Gaps = 10/354 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A QVFE +K F P + T+ LL + GKS +P+ A +V EM G P+ Y +L
Sbjct: 306 EAAQVFEEMKLSGF-SPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSL 364
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
++AY R+ L+ EA +QM +PDV+TY+TL+ A E ++ +M
Sbjct: 365 ISAYARDGLLREAMELKDQM-VEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAG 423
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN T N ++ +G G F +M +V +E C PD+ T NT+L+VF G +
Sbjct: 424 CKPNICTFNALIKMHGNRGRFAEMMKVFEE-IEICNCAPDIVTWNTLLAVFGQNGMDSEV 482
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+++ + G PE TFN LI AY + + + +V + M + S+YN V+ A
Sbjct: 483 SGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAA 542
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL--QIA 423
+ G + E F +M K + T+C L++ YAN+ ++ + LA ++ +
Sbjct: 543 LARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHT---LAEEIYSGLT 599
Query: 424 ENVS-FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
E V ++ K D LME E ++ +K+K PD T + M Y + M
Sbjct: 600 EPVPVLLKTLVLVNSKCDLLMETEHAFEELKKKG-SPDLSTLNAMIAIYGRRQM 652
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 175/372 (47%), Gaps = 4/372 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQP-ELARKVFNEMVEEGIEPTPEL 181
++ A+ VF+ ++E+ +P TY +L + GK G P + + M G+ P
Sbjct: 232 RYRDAVLVFKKMEEEGC-KPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYT 290
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y L++ R SL +EA +MK L PD T++TL+ + R + + ++M
Sbjct: 291 YNTLISCCRRGSLYEEAAQVFEEMK-LSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEM 349
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ +P+ VT N ++ Y + G+ + + M+E KPDV+T T+LS F G
Sbjct: 350 EFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGI-KPDVFTYTTLLSGFEKAGM 408
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ R + + R G P TFN LI +G + + +M V E + T+N
Sbjct: 409 DEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNT 468
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
++ F G + F++M G + TF LI+ Y+ G F + ++ + +
Sbjct: 469 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAG 528
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
+ ++S YNAV++A + + E+V+ MK+ C+P+ T+ + AYA ++++
Sbjct: 529 VTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMH 588
Query: 482 ALEQEKLQMLLE 493
L +E L E
Sbjct: 589 TLAEEIYSGLTE 600
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 143/277 (51%), Gaps = 8/277 (2%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM-FDQMERV 272
DVY Y++LI A R+ +++ M+E P +T N++L YGK GM + ++ +
Sbjct: 216 DVYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKISGL 275
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
+ GM +S+ PD +T NT++S + + +E+ + G P+ TFN L+ YG
Sbjct: 276 VHGM-KSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYG 334
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K R + V++ M F + TYN++I A++ G + +QM +G+K D
Sbjct: 335 KSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVF 394
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIA---ENVSFYNAVISACIKADDLMEMERVY 449
T+ L++G+ AG+ ++R+ +++ A N+ +NA+I EM +V+
Sbjct: 395 TYTTLLSGFEKAGMDE---PAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVF 451
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ ++ +C PD T++ + + + GM+ +V + +E
Sbjct: 452 EEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKE 488
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 156/369 (42%), Gaps = 40/369 (10%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P T+ L+ + G G+ KVF E+ P + LLA + +N + E
Sbjct: 425 KPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSG 484
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+MK P+ T++TLI A F+ +Y+ M E VTP+ + N VL
Sbjct: 485 VFKEMKR-AGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAAL 543
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM--------------- 305
+ G+++Q E+V + M + CKP+ T ++L +AN +++ M
Sbjct: 544 ARGGLWEQSEKVFAEM-KDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPV 602
Query: 306 --------------------ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
E +E+ + G P+ T N +I YG+++M K + ++
Sbjct: 603 PVLLKTLVLVNSKCDLLMETEHAFEELKKKG-SPDLSTLNAMIAIYGRRQMVAKANEILN 661
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
+M + F + +TYN+++ S + + E +++ A+G+K D ++ +I Y G
Sbjct: 662 FMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNG 721
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH-CRPDSETF 464
+ +V YN + A AD L E R KH C+ + T+
Sbjct: 722 RMKDASRIFSYMKTYGLVPDVITYNTFV-ASYAADSLFEDAIGVVRYMIKHGCKRNQNTY 780
Query: 465 SIMTEAYAK 473
+ + + Y K
Sbjct: 781 NSIVDGYCK 789
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 108/243 (44%), Gaps = 4/243 (1%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
W Q+ +VF +K+ +P E TY LL S + E + E+ EP P L
Sbjct: 549 WEQSEKVFAEMKDGRC-KPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLK 607
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
L+ + L+ E ++K PD+ T + +I + M+E
Sbjct: 608 TLVLVNSKCDLLMETEHAFEELKK--KGSPDLSTLNAMIAIYGRRQMVAKANEILNFMNE 665
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+P+ T N ++ + ++ F++ E VL +L KPD+ + NT++ + G++
Sbjct: 666 SGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGL-KPDLISYNTVIFAYCRNGRMK 724
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
R + + +G+ P+ T+N + +Y +++ V+ YM K +TYN+++
Sbjct: 725 DASRIFSYMKTYGLVPDVITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIV 784
Query: 364 EAF 366
+ +
Sbjct: 785 DGY 787
>gi|449451631|ref|XP_004143565.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Cucumis sativus]
Length = 528
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 158/324 (48%), Gaps = 5/324 (1%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+ +W + L+VF +++Q +Y G Y KL+ ++GK GQ +A +F+EM G P
Sbjct: 104 RDKWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTS 163
Query: 181 LYTALLAAYCRNSLIDEAFVTL----NQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
+Y AL+ A+ + +A V + +MK + C+P++ TY+ L +A A + + + T
Sbjct: 164 VYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNT 223
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
L++D+DE V+ + T N V+ YGK G +ME +L+ M +S KPD+ + N ++ +
Sbjct: 224 LFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARM-KSNQIKPDIISFNLLIDSY 282
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
K D ME+ ++ P TFN +I YGK R+ +K V M+ + + +
Sbjct: 283 GKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSY 342
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
T ++I + F+ M G + T +++ Y GL +
Sbjct: 343 VTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFES 402
Query: 417 ASKLQIAENVSFYNAVISACIKAD 440
A +++ + + Y + A KAD
Sbjct: 403 AGNMRVFPDSTTYKLLYKAYTKAD 426
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 65/142 (45%), Gaps = 11/142 (7%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A +VF +K+ Y P T L+++ G AR++F+ MV G E A+
Sbjct: 325 KAEEVFRKMKDMG-YDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAM 383
Query: 186 LAAYCRNSLIDEA---FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
L YC N L EA F + M+ P D TY L KA A + EL+E L ++MD
Sbjct: 384 LDVYCINGLPLEADLLFESAGNMRVFP----DSTTYKLLYKAYTKADKKELLEKLLKNMD 439
Query: 243 ERSVTPNTVTQNIVLGGYGKAG 264
+ + PN + L G G
Sbjct: 440 KAGIIPN---KRFFLDALGTIG 458
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 166/379 (43%), Gaps = 34/379 (8%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P G Y L+ ++G+ A VF MV+ G++P Y +L Y + ++ + V
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 229
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L PD YTY+TLI C ++ ++ +M P+ VT N +L YG
Sbjct: 230 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 289
Query: 262 KAGMFDQ-------MERV-----------------LSGMLESATC----------KPDVW 287
KA D+ MERV G+LE A KPDV
Sbjct: 290 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVV 349
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T T++S G++D Y++ G P T+N LI +G + + +M +V +
Sbjct: 350 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEF 409
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
R F T+N ++ F G + F++M G + T+ LI+ Y+ GLF
Sbjct: 410 RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 469
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ + + I +VS YNAV+SA + + E+++ M+E+ C+PD ++S +
Sbjct: 470 DLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSL 529
Query: 468 TEAYAKEGMNDKVYALEQE 486
AYA DK+ AL +
Sbjct: 530 LHAYANAKRLDKMKALSDD 548
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 179/375 (47%), Gaps = 16/375 (4%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A QVF+ +K F +P + T+ LL + GK+ + + A +V EM G P+ Y +L
Sbjct: 261 EAAQVFDEMKASGF-EPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSL 319
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+++Y ++ L+++A V L Q + +PDV TY+TLI A + + Y +M
Sbjct: 320 ISSYVKDGLLEQA-VALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNG 378
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN T N ++ +G G F +M V SA PD+ T NT+L+VF G +
Sbjct: 379 CKPNLCTYNALIKMHGVRGKFPEMMAVFDE-FRSAGFVPDIVTWNTLLAVFGQNGLDSEV 437
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+++ + G PE T+ LI +Y + ++D + + M + STYN V+ A
Sbjct: 438 SGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSA 497
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ G + E F +M K D ++ L++ YANA K + ++ S +E
Sbjct: 498 LARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANA----KRLDKMKALSDDIYSER 553
Query: 426 VSFYNAVISACI----KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
+ +N ++ + K ++L E E+ + +++K C D + M Y K M KV
Sbjct: 554 IEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKV- 612
Query: 482 ALEQEKLQMLLEASG 496
EK+ L++ S
Sbjct: 613 ----EKILSLMKESA 623
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 173/361 (47%), Gaps = 9/361 (2%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H ++ ++ + + VF+ + F P T+ LL + G++G VF EM + G P
Sbjct: 393 HGVRGKFPEMMAVFDEFRSAGFV-PDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIP 451
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
+ Y +L+++Y R L D A +M PDV TY+ ++ A R+E E L
Sbjct: 452 ERDTYVSLISSYSRCGLFDLAMQIYKRMME-AGIYPDVSTYNAVLSALARGGRWEQAEKL 510
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
+ +M+ER P+ + + +L Y A D+M + LS + S +P W + T++ V +
Sbjct: 511 FAEMEERDCKPDEYSYSSLLHAYANAKRLDKM-KALSDDIYSERIEPHNWLVKTLVLVNS 569
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+ E+ + + R + N ++ YGK RM K+ ++ M++ +++
Sbjct: 570 KVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAA 629
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
TYN+++ +S +GD + E ++ + G++ D ++ +I Y G ++ + RL
Sbjct: 630 TYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKG---QMKEASRLF 686
Query: 418 SKLQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
S+++ + +V YN + + + E + + M + C+P+ T++ + E Y +
Sbjct: 687 SEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRN 746
Query: 475 G 475
G
Sbjct: 747 G 747
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 150/338 (44%), Gaps = 8/338 (2%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L ++G+ + A ++EMV G +P Y AL+ + E
Sbjct: 345 KPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMA 404
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
++ ++ PD+ T++TL+ + ++++M + P T ++ Y
Sbjct: 405 VFDEFRS-AGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSY 463
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ G+FD ++ M+E A PDV T N +LS A G+ + E+ + + P+
Sbjct: 464 SRCGLFDLAMQIYKRMME-AGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPD 522
Query: 321 TRTFNILIGAYGKKRMYDKMSSVME--YMRKLQ-FPWTSSTYNNVIEAFSDMGDAKHMEY 377
+++ L+ AY + DKM ++ + Y +++ W T V +++ +A E
Sbjct: 523 EYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEA---EK 579
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
F ++ + D +++ Y + KV + L + I + + YN+++
Sbjct: 580 AFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYS 639
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ D + E + +K RPD +++ + AY ++G
Sbjct: 640 RLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKG 677
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 166/351 (47%), Gaps = 3/351 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A VF+ +K F P + TY LL + GKS + + A +V EM G P+ Y +L
Sbjct: 122 EAAAVFKDMKSMGFV-PDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSL 180
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
++AY R+ L+ EA NQM DV+TY+TL+ V A + E ++ +M
Sbjct: 181 ISAYARDGLLKEAMELKNQM-VEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAG 239
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN T N ++ +G G F +M +V ++++ C PD+ T NT+L+VF G +
Sbjct: 240 CKPNICTFNALIKMHGNRGKFAEMMKVFEE-IKNSCCVPDIVTWNTLLAVFGQNGMDSEV 298
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+++ + G PE T+N LI AY + +D+ + + M + STYN V+ A
Sbjct: 299 SGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAA 358
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ G + E F +M K + T+C L++ YAN ++++ I +
Sbjct: 359 LARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPH 418
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
++ K D L+E E + +K K PD T + M Y + M
Sbjct: 419 AVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQM 469
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 176/376 (46%), Gaps = 4/376 (1%)
Query: 119 VLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQP-ELARKVFNEMVEEGIEP 177
V ++ +A+ VF+ ++E+ +P TY +L + GK G P + +F M G+ P
Sbjct: 44 VSNGRYREAVMVFKKMEEEGC-KPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLP 102
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
Y L+ R SL +EA MK++ PD TY+ L+ + R + +
Sbjct: 103 DEYTYNTLITCCRRGSLHEEAAAVFKDMKSM-GFVPDKVTYNALLDVYGKSRRTKEAMEV 161
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
++M+ +P+ VT N ++ Y + G+ + + + M+E DV+T T+LS F
Sbjct: 162 LREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGI-NLDVFTYTTLLSGFV 220
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
G+ + R + + R G P TFN LI +G + + +M V E ++
Sbjct: 221 RAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIV 280
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
T+N ++ F G + F++M G + T+ LI+ Y+ G F + + +
Sbjct: 281 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRM 340
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
+ I ++S YNAV++A + + E+++ MK+ C+P+ T+ + AYA
Sbjct: 341 LEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEI 400
Query: 478 DKVYALEQEKLQMLLE 493
++ AL +E ++E
Sbjct: 401 GRMLALAEEICSGVIE 416
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 145/280 (51%), Gaps = 14/280 (5%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM-FDQMERV 272
DVY Y++LI ACV R+ +++ M+E P +T N++L YGK GM +++++ +
Sbjct: 32 DVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKIKGL 91
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
GM ++A PD +T NT+++ + ++ ++ G P+ T+N L+ YG
Sbjct: 92 FEGM-KNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYG 150
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSS---TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
K R + ME +R+++ S TYN++I A++ G K QM G+
Sbjct: 151 KSR---RTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINL 207
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIA---ENVSFYNAVISACIKADDLMEME 446
D T+ L++G+ AG K S++R+ ++++ A N+ +NA+I EM
Sbjct: 208 DVFTYTTLLSGFVRAG---KDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMM 264
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+V++ +K C PD T++ + + + GM+ +V + +E
Sbjct: 265 KVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKE 304
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 176/387 (45%), Gaps = 19/387 (4%)
Query: 100 RKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQ 159
R A K + T H + ++ + ++VFE +K P T+ LL + G++G
Sbjct: 236 RAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCV-PDIVTWNTLLAVFGQNGM 294
Query: 160 PELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYS 219
VF EM G P + Y L++AY R D+A +M PD+ TY+
Sbjct: 295 DSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLE-AGITPDLSTYN 353
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM----ERVLSG 275
++ A +E E ++ +M + PN +T +L Y +M E + SG
Sbjct: 354 AVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSG 413
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
++E P + T++ V + + E + + + G P+ T N ++ YG+++
Sbjct: 414 VIE-----PHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQ 468
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
M+ K + ++ +M + F + +TYN+++ S + + E +++ A+G+K DT ++
Sbjct: 469 MFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYN 528
Query: 396 CLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDLMEMERVYKRM 452
+I Y G ++ + R+ S+++ + +V YN + A AD + E R
Sbjct: 529 TVIFAYCRNG---RMKEASRIFSEMRESGLVPDVITYNTFV-ASYAADSMFEDAIDVVRY 584
Query: 453 KEKH-CRPDSETFSIMTEAYAKEGMND 478
KH C+P+ T++ + + Y K D
Sbjct: 585 MIKHGCKPNQNTYNSVVDGYCKHNHRD 611
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Query: 121 KKQWF-QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
++Q F + ++ + E F P TY L+ + +S E + +V E++ +GI+P
Sbjct: 466 RRQMFTKTNEILNFMNESGF-TPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDT 524
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
Y ++ AYCRN + EA ++M+ PDV TY+T + + FE + +
Sbjct: 525 ISYNTVIFAYCRNGRMKEASRIFSEMRE-SGLVPDVITYNTFVASYAADSMFEDAIDVVR 583
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
M + PN T N V+ GY K D +S + E
Sbjct: 584 YMIKHGCKPNQNTYNSVVDGYCKHNHRDDAIMFISSLHE 622
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 166/379 (43%), Gaps = 34/379 (8%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P G Y L+ ++G+ A VF MV+ G++P Y +L Y + ++ + V
Sbjct: 152 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 211
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L PD YTY+TLI C ++ ++ +M P+ VT N +L YG
Sbjct: 212 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 271
Query: 262 KAGMFDQ-------MERV-----------------LSGMLESATC----------KPDVW 287
KA D+ MERV G+LE A KPDV
Sbjct: 272 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVV 331
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T T++S G++D Y++ G P T+N LI +G + + +M +V +
Sbjct: 332 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEF 391
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
R F T+N ++ F G + F++M G + T+ LI+ Y+ GLF
Sbjct: 392 RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 451
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ + + I +VS YNAV+SA + + E+++ M+E+ C+PD ++S +
Sbjct: 452 DLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSL 511
Query: 468 TEAYAKEGMNDKVYALEQE 486
AYA DK+ AL +
Sbjct: 512 LHAYANAKRLDKMKALSDD 530
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 179/375 (47%), Gaps = 16/375 (4%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A QVF+ +K F +P + T+ LL + GK+ + + A +V EM G P+ Y +L
Sbjct: 243 EAAQVFDEMKASGF-EPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSL 301
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+++Y ++ L+++A V L Q + +PDV TY+TLI A + + Y +M
Sbjct: 302 ISSYVKDGLLEQA-VALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNG 360
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN T N ++ +G G F +M V SA PD+ T NT+L+VF G +
Sbjct: 361 CKPNLCTYNALIKMHGVRGKFPEMMAVFDE-FRSAGFVPDIVTWNTLLAVFGQNGLDSEV 419
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+++ + G PE T+ LI +Y + ++D + + M + STYN V+ A
Sbjct: 420 SGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSA 479
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ G + E F +M K D ++ L++ YANA K + ++ S +E
Sbjct: 480 LARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANA----KRLDKMKALSDDIYSER 535
Query: 426 VSFYNAVISACI----KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
+ +N ++ + K ++L E E+ + +++K C D + M Y K M KV
Sbjct: 536 IEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKV- 594
Query: 482 ALEQEKLQMLLEASG 496
EK+ L++ S
Sbjct: 595 ----EKILSLMKESA 605
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 173/361 (47%), Gaps = 9/361 (2%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H ++ ++ + + VF+ + F P T+ LL + G++G VF EM + G P
Sbjct: 375 HGVRGKFPEMMAVFDEFRSAGFV-PDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIP 433
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
+ Y +L+++Y R L D A +M PDV TY+ ++ A R+E E L
Sbjct: 434 ERDTYVSLISSYSRCGLFDLAMQIYKRMME-AGIYPDVSTYNAVLSALARGGRWEQAEKL 492
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
+ +M+ER P+ + + +L Y A D+M + LS + S +P W + T++ V +
Sbjct: 493 FAEMEERDCKPDEYSYSSLLHAYANAKRLDKM-KALSDDIYSERIEPHNWLVKTLVLVNS 551
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+ E+ + + R + N ++ YGK RM K+ ++ M++ +++
Sbjct: 552 KVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAA 611
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
TYN+++ +S +GD + E ++ + G++ D ++ +I Y G ++ + RL
Sbjct: 612 TYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKG---QMKEASRLF 668
Query: 418 SKLQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
S+++ + +V YN + + + E + + M + C+P+ T++ + E Y +
Sbjct: 669 SEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRN 728
Query: 475 G 475
G
Sbjct: 729 G 729
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 150/338 (44%), Gaps = 8/338 (2%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L ++G+ + A ++EMV G +P Y AL+ + E
Sbjct: 327 KPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMA 386
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
++ ++ PD+ T++TL+ + ++++M + P T ++ Y
Sbjct: 387 VFDEFRS-AGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSY 445
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ G+FD ++ M+E A PDV T N +LS A G+ + E+ + + P+
Sbjct: 446 SRCGLFDLAMQIYKRMME-AGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPD 504
Query: 321 TRTFNILIGAYGKKRMYDKMSSVME--YMRKLQ-FPWTSSTYNNVIEAFSDMGDAKHMEY 377
+++ L+ AY + DKM ++ + Y +++ W T V +++ +A E
Sbjct: 505 EYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEA---EK 561
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
F ++ + D +++ Y + KV + L + I + + YN+++
Sbjct: 562 AFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYS 621
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ D + E + +K RPD +++ + AY ++G
Sbjct: 622 RLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKG 659
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 179/372 (48%), Gaps = 4/372 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQP-ELARKVFNEMVEEGIEPTPEL 181
++ +A+ VF+ ++E +P TY +L + GK G P + + M GI P
Sbjct: 215 RYREAVMVFKKMEEVGC-KPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYT 273
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y L++ R +L +EA L +MK L PD TY+ L+ + R + + Q+M
Sbjct: 274 YNTLISCCRRGNLYEEAAGVLKEMK-LAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEM 332
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ P+ VT N ++ Y + G+ + + + M+E KPDV+T T+LS F G+
Sbjct: 333 EGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGI-KPDVFTYTTLLSGFEKAGK 391
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ +E+ RN G P TFN LI +G + + +M V E ++ Q T+N
Sbjct: 392 DKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNT 451
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
++ F G + F++M G + TF LI+ Y+ G F + ++ + +
Sbjct: 452 LLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAG 511
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
+ ++S YNAV++A + + E+V MK+ C+P+ T+ + AYA +++
Sbjct: 512 VNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMC 571
Query: 482 ALEQEKLQMLLE 493
AL +E ++E
Sbjct: 572 ALAEEIYSGIIE 583
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 174/391 (44%), Gaps = 44/391 (11%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A+Q+FE ++ + +P T+ L+ + G G+ KVF ++ P + LL
Sbjct: 395 AVQIFEEMRNEGC-KPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLL 453
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+ + +N + E +MK P+ T++TLI + F+ +Y+ M E V
Sbjct: 454 SVFGQNGMDSEVSGVFKEMKR-AGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGV 512
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM- 305
P+ + N VL + G++ Q E+VL+ M + CKP+ T ++L +AN +++ M
Sbjct: 513 NPDLSSYNAVLAALARGGLWKQSEKVLAEM-KDGRCKPNELTYCSLLHAYANGKEIERMC 571
Query: 306 ----------------------------------ERWYEKFRNFGIDPETRTFNILIGAY 331
ER + + R G P+ T N ++ Y
Sbjct: 572 ALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIY 631
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
G+++M K + +++ M++ F + +TYN+++ +S + + E ++ A+G++ D
Sbjct: 632 GRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDI 691
Query: 392 KTFCCLINGYANAGLFH---KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
++ +I Y G +V+S +R + A ++ YN I++ +E V
Sbjct: 692 ISYNTVIYAYCRNGRMRDASRVLSEMRESGP---APDIITYNTFIASYAADSMFVEAIDV 748
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
M + C+P+ T++ + + Y K D+
Sbjct: 749 VCYMIKHGCKPNQSTYNSIVDWYCKLNRRDE 779
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 131/274 (47%), Gaps = 2/274 (0%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM-FDQMERV 272
DVY Y+++I A R+ +++ M+E P +T N++L YGK GM +++M +
Sbjct: 199 DVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGL 258
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
+ M +SA PD +T NT++S + ++ + G P+ T+N L+ YG
Sbjct: 259 VDRM-KSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYG 317
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K R + V++ M P + TYN++I A++ G + QM +G+K D
Sbjct: 318 KSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVF 377
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
T+ L++G+ AG + N+ +NA+I EM +V++ +
Sbjct: 378 TYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDI 437
Query: 453 KEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
K C PD T++ + + + GM+ +V + +E
Sbjct: 438 KTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKE 471
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 4/187 (2%)
Query: 165 KVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
+ F E+ + G P A+++ Y R ++ +A L+ MK P + TY++L+
Sbjct: 607 RAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKR-GGFTPSLTTYNSLMYM 665
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
+ FE E + +++ + + P+ ++ N V+ Y + G RVLS M ES P
Sbjct: 666 YSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPA-P 724
Query: 285 DVWTMNTILSVFANKGQ-VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
D+ T NT ++ +A V+ ++ ++ G P T+N ++ Y K D+ S
Sbjct: 725 DIITYNTFIASYAADSMFVEAIDVVCYMIKH-GCKPNQSTYNSIVDWYCKLNRRDEASMF 783
Query: 344 MEYMRKL 350
+ +RKL
Sbjct: 784 VNNLRKL 790
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 187/415 (45%), Gaps = 7/415 (1%)
Query: 58 ESAVAAKKRLWKEGEYPGVS--ETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETF 115
+ A A +R+ + G P + T I G+ K I LE N V T
Sbjct: 272 DEATALLQRMTRSGCSPNIVTYNTIIDGH-CKLGRIDEAYHLLEEMVDGGCQPNVVTYTV 330
Query: 116 SDHVLKK--QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE 173
K + A+ + E++ E+ Y P TY LL + K + E A ++ + M+++
Sbjct: 331 LLDAFCKCGKAEDAIGLVEVMVEKG-YVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQK 389
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
G P Y ++A C+ + + E + L QM + NC PD+ T++T+I A R ++
Sbjct: 390 GCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLS-NNCVPDIVTFNTIIDAMCKTYRVDI 448
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
L+ + E TPN VT N ++ G K+ FDQ E +L M C PD+ T NT++
Sbjct: 449 AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVI 508
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
+VD + + + + G+ P+ T++I+I + K R D+ ++V+E M K F
Sbjct: 509 DGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFD 568
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
+ TY +I+ F G+ + + ++G D TF I+ + G +
Sbjct: 569 PGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGEL 628
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ + + + YN ++ A + +++ M++ C PD+ T++ +
Sbjct: 629 LETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 160/361 (44%), Gaps = 3/361 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
A+++ E + + F P +Y +L K+ + E A + +MV G P YT +
Sbjct: 62 DAIRLLEEMVDNGF-APNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTV 120
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ +DEA +++M CQP+V TY TL+ + L + M ER
Sbjct: 121 INGLCKLDQVDEACRVMDKM-IQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN +T N ++ G D ++ M ES +C PDV+T +TI+ G+VD
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
R E + G P T++ L+ K D+ +++++ M + TYN +I+
Sbjct: 240 CRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 299
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+G + E+M G + + T+ L++ + G I V + + N
Sbjct: 300 HCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPN 359
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALE 484
+ YN+++ K D++ ++ M +K C P+ +++ + K +++ V LE
Sbjct: 360 LFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLE 419
Query: 485 Q 485
Q
Sbjct: 420 Q 420
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 154/361 (42%), Gaps = 37/361 (10%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
Q +A +V + + ++ QP TY L+ + G + A ++ +M E G P Y
Sbjct: 129 QVDEACRVMDKMIQRGC-QPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITY 187
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
++ C +D A +M+ +C PDV+TYST++ + V + + + L + M
Sbjct: 188 NNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMV 247
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
+ +PN VT + +L G KAG D+ +L M S C P++ T NTI+ G++
Sbjct: 248 SKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSG-CSPNIVTYNTIIDGHCKLGRI 306
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
D E+ + G P T+ +L+ A+ K + ++E M + + TYN++
Sbjct: 307 DEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSL 366
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
++ F K + + C L++ G V+S
Sbjct: 367 LDMFCK-------------------KDEVERACQLLSSMIQKGCVPNVVS---------- 397
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
YN VI+ KA + E + ++M +C PD TF+ + +A K D Y
Sbjct: 398 ------YNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYE 451
Query: 483 L 483
L
Sbjct: 452 L 452
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 143/370 (38%), Gaps = 38/370 (10%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY LL L K+G+ + A + M G P Y ++ +C+ IDEA+
Sbjct: 253 PNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHL 312
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFE----LIET--------------------- 236
L +M CQP+V TY+ L+ A + E L+E
Sbjct: 313 LEEMVD-GGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFC 371
Query: 237 ----------LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
L M ++ PN V+ N V+ G KA + +L ML S C PD+
Sbjct: 372 KKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQML-SNNCVPDI 430
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
T NTI+ +VD+ + + G P T+N L+ K R +D+ ++
Sbjct: 431 VTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLRE 490
Query: 347 M-RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
M RK TYN VI+ F QM ++G+ D T+ +I+
Sbjct: 491 MTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWR 550
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ + + L K Y +I K +L + + + + K PD TFS
Sbjct: 551 FMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFS 610
Query: 466 IMTEAYAKEG 475
I + +K G
Sbjct: 611 IFIDWLSKRG 620
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 141/337 (41%), Gaps = 16/337 (4%)
Query: 170 MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM 229
M +G++ ++ ++L C +A + +M C PD TY+T+I +
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMS--KTCPPDSVTYNTMINGLSKSD 58
Query: 230 RFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM 289
R + L ++M + PN + N VL G+ KA + +L M+ C PDV +
Sbjct: 59 RLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRG-CPPDVVSY 117
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
T+++ QVD R +K G P T+ L+ + + D ++ M +
Sbjct: 118 TTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTE 177
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG-MKADTKTFCCLINGYANAGLFH 408
+ + TYNN++ F++M G D T+ +++ +G
Sbjct: 178 RGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSG--- 234
Query: 409 KVISSVRLASKL---QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
KV + RL + + NV Y++++ KA L E + +RM C P+ T++
Sbjct: 235 KVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYN 294
Query: 466 IMTEAYAKEGMNDKVYALEQEKLQMLLEASGHWQQNI 502
+ + + K G D+ Y L +E + G Q N+
Sbjct: 295 TIIDGHCKLGRIDEAYHLLEEMVD------GGCQPNV 325
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 120/273 (43%), Gaps = 1/273 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ ++ + K+ + ++A ++FN + E G P Y +L+ C++ D+A
Sbjct: 428 PDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYL 487
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L +M C PD+ TY+T+I + R + L+ M + P+ VT +IV+
Sbjct: 488 LREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLC 547
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K D+ VL ML++ P T T++ F G +D + + G P+
Sbjct: 548 KWRFMDEANNVLELMLKNGF-DPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDV 606
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
TF+I I K+ + ++E M + + TYN +++ F D + FE
Sbjct: 607 VTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEV 666
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
M G + D T+ L+ + + +++ V
Sbjct: 667 MRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEV 699
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 181/373 (48%), Gaps = 6/373 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQP--ELARKVFNEMVEEGIEPTPE 180
++ +A+ VF+ L+E+ +P TY +L + GK G P ++A V + M G+ P
Sbjct: 235 RYREAVMVFKKLEEEGC-RPTLITYNVILNVYGKMGMPWSKIAGLV-DSMKSSGVAPDLY 292
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
Y L+++ R SL +EA +MK PD TY+ L+ + R + ++
Sbjct: 293 TYNTLISSCRRGSLYEEAAEVFEEMKA-AGFSPDKVTYNALLDVYGKSRRPREAMEVLKE 351
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M+ P+ VT N ++ Y + G+ D+ + S M++ KPDV+T T+LS F G
Sbjct: 352 MEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGI-KPDVFTYTTLLSGFEKTG 410
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+ D + +E+ R G P TFN LI +G + + +M V E ++ + T+N
Sbjct: 411 KDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWN 470
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
++ F G + F++M G + TF LI+ Y+ G F + ++ R
Sbjct: 471 TLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDA 530
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+ ++S YNAV++A + + E+V MK+ C+P+ T+ + AYA +++
Sbjct: 531 GVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERM 590
Query: 481 YALEQEKLQMLLE 493
AL +E ++E
Sbjct: 591 SALAEEIYSGIIE 603
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 163/366 (44%), Gaps = 11/366 (3%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H + + + ++VFE +K P T+ LL + G++G VF EM G P
Sbjct: 441 HGNRGNFVEMMKVFEEIKICECV-PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 499
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
+ + L++AY R D+A +M PD+ TY+ ++ A +E E +
Sbjct: 500 ERDTFNTLISAYSRCGFFDQAMAIYRRMLD-AGVTPDLSTYNAVLAALARGGLWEQSEKV 558
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM----ERVLSGMLESATCKPDVWTMNTIL 293
+M + PN +T +L Y ++M E + SG++E P + T++
Sbjct: 559 LAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIE-----PQAVLLKTLV 613
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
V++ + ER + + R G P+ T N ++ YG++RM K + ++ +++ F
Sbjct: 614 LVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFT 673
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
+ +TYN+++ +S + E ++ A+GMK D +F +I Y G +
Sbjct: 674 PSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRI 733
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+A +V YN I++ +E V K M + C+P+ T++ + + + K
Sbjct: 734 FAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCK 793
Query: 474 EGMNDK 479
D+
Sbjct: 794 LNRRDE 799
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 137/277 (49%), Gaps = 8/277 (2%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM-FDQMERV 272
D+Y Y++LI A R+ +++ ++E P +T N++L YGK GM + ++ +
Sbjct: 219 DIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGL 278
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
+ M +S+ PD++T NT++S + +E+ + G P+ T+N L+ YG
Sbjct: 279 VDSM-KSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYG 337
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K R + V++ M F + TYN++I A++ G QM +G+K D
Sbjct: 338 KSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVF 397
Query: 393 TFCCLINGYANAG---LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
T+ L++G+ G KV +R+A N+ +NA+I + +EM +V+
Sbjct: 398 TYTTLLSGFEKTGKDDYAMKVFEEMRVAG---CQPNICTFNALIKMHGNRGNFVEMMKVF 454
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ +K C PD T++ + + + GM+ +V + +E
Sbjct: 455 EEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKE 491
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 87/191 (45%), Gaps = 5/191 (2%)
Query: 129 QVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAA 188
+ F L+EQ F P T ++ + G+ ++ N + + G P+ Y +L+
Sbjct: 627 RAFLELREQGF-SPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYM 685
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP 248
Y R +++ L ++ +PD+ +++T+I A R + ++ +M + + P
Sbjct: 686 YSRTEHFEKSEDILREI-IAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAP 744
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW 308
+ +T N + Y MF + V+ M+++ CKP+ T N+++ F + D +
Sbjct: 745 DVITYNTFIASYASDSMFIEAIDVVKYMIKNE-CKPNQNTYNSLIDWFCKLNRRDEANSF 803
Query: 309 YEKFRNFGIDP 319
RN +DP
Sbjct: 804 ISNLRN--LDP 812
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 181/373 (48%), Gaps = 6/373 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQP--ELARKVFNEMVEEGIEPTPE 180
++ +A+ VF+ L+E+ +P TY +L + GK G P ++A V + M G+ P
Sbjct: 235 RYREAVMVFKKLEEEGC-RPTLITYNVILNVYGKMGMPWSKIAGLV-DSMKSSGVAPDLY 292
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
Y L+++ R SL +EA +MK PD TY+ L+ + R + ++
Sbjct: 293 TYNTLISSCRRGSLYEEAAEVFEEMKA-AGFSPDKVTYNALLDVYGKSRRPREAMEVLKE 351
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M+ P+ VT N ++ Y + G+ D+ + S M++ KPDV+T T+LS F G
Sbjct: 352 MEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGI-KPDVFTYTTLLSGFEKTG 410
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+ D + +E+ R G P TFN LI +G + + +M V E ++ + T+N
Sbjct: 411 KDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWN 470
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
++ F G + F++M G + TF LI+ Y+ G F + ++ R
Sbjct: 471 TLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDA 530
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+ ++S YNAV++A + + E+V MK+ C+P+ T+ + AYA +++
Sbjct: 531 GVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERM 590
Query: 481 YALEQEKLQMLLE 493
AL +E ++E
Sbjct: 591 SALAEEIYSGIIE 603
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 163/366 (44%), Gaps = 11/366 (3%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H + + + ++VFE +K P T+ LL + G++G VF EM G P
Sbjct: 441 HGNRGNFVEMMKVFEEIKICECV-PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 499
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
+ + L++AY R D+A +M PD+ TY+ ++ A +E E +
Sbjct: 500 ERDTFNTLISAYSRCGFFDQAMAIYRRMLD-AGVTPDLSTYNAVLAALARGGLWEQSEKV 558
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM----ERVLSGMLESATCKPDVWTMNTIL 293
+M + PN +T +L Y ++M E + SG++E P + T++
Sbjct: 559 LAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIE-----PQAVLLKTLV 613
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
V++ + ER + + R G P+ T N ++ YG++RM K + ++ +++ F
Sbjct: 614 LVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFT 673
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
+ +TYN+++ +S + E ++ A+GMK D +F +I Y G +
Sbjct: 674 PSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRI 733
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+A +V YN I++ +E V K M + C+P+ T++ + + + K
Sbjct: 734 FAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCK 793
Query: 474 EGMNDK 479
D+
Sbjct: 794 LNRRDE 799
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 137/277 (49%), Gaps = 8/277 (2%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM-FDQMERV 272
D+Y Y++LI A R+ +++ ++E P +T N++L YGK GM + ++ +
Sbjct: 219 DIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGL 278
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
+ M +S+ PD++T NT++S + +E+ + G P+ T+N L+ YG
Sbjct: 279 VDSM-KSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYG 337
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K R + V++ M F + TYN++I A++ G QM +G+K D
Sbjct: 338 KSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVF 397
Query: 393 TFCCLINGYANAG---LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
T+ L++G+ G KV +R+A N+ +NA+I + +EM +V+
Sbjct: 398 TYTTLLSGFEKTGKDDYAMKVFEEMRVAG---CQPNICTFNALIKMHGNRGNFVEMMKVF 454
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ +K C PD T++ + + + GM+ +V + +E
Sbjct: 455 EEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKE 491
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 87/191 (45%), Gaps = 5/191 (2%)
Query: 129 QVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAA 188
+ F L+EQ F P T ++ + G+ ++ N + + G P+ Y +L+
Sbjct: 627 RAFLELREQGF-SPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYM 685
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP 248
Y R +++ L ++ +PD+ +++T+I A R + ++ +M + + P
Sbjct: 686 YSRTEHFEKSEDILREI-IAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAP 744
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW 308
+ +T N + Y MF + V+ M+++ CKP+ T N+++ F + D +
Sbjct: 745 DVITYNTFIASYASDSMFIEAIDVVKYMIKNG-CKPNQNTYNSLIDWFCKLNRRDEASSF 803
Query: 309 YEKFRNFGIDP 319
RN +DP
Sbjct: 804 ISNLRN--LDP 812
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 175/375 (46%), Gaps = 3/375 (0%)
Query: 103 KAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPEL 162
K K +N A F + + W ++L++F+ ++ Q + +P E Y ++ LLG+ G E
Sbjct: 102 KNKLSLNDFALVFKEFAQRGDWQRSLRLFKHMQRQIWCKPNEHIYTIMISLLGREGLLEK 161
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
+F EM G+ + YTAL+ +Y RN + + L +MK P + TY+T+I
Sbjct: 162 CSDIFEEMGAHGVSRSVFSYTALINSYGRNGKYEVSLELLERMKK-ERVSPSILTYNTVI 220
Query: 223 KACV-DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
+C + +E + L+ +M + P+ VT N +L G+ D+ E V M E
Sbjct: 221 NSCARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGV 280
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
PD+ T ++ F ++D + ++ + G PE ++N+L+ AY + + +
Sbjct: 281 V-PDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDAT 339
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
V M++ + TY+ ++ + G + F +M + D T+ LI+ +
Sbjct: 340 GVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVF 399
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
G F +V++ ++ + N+ Y +I AC K + +++ M EK P S
Sbjct: 400 GEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSS 459
Query: 462 ETFSIMTEAYAKEGM 476
+ ++ + EAY + M
Sbjct: 460 KAYTGVIEAYGQAAM 474
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 173/402 (43%), Gaps = 10/402 (2%)
Query: 95 KKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLL 154
+ K ER + + NTV + + L W L +F ++ + QP TY LL
Sbjct: 203 RMKKERVSPSILTYNTVINSCARGGL--DWEGLLGLFAEMRHEGI-QPDIVTYNTLLCAC 259
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
G + A VF M E G+ P YT L+ + + + +D+ L +M + N P+
Sbjct: 260 SNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNV-PE 318
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
+ +Y+ L++A E +++ M E PN T +I+LG YGK G +D++ +
Sbjct: 319 ISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFL 378
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
M S T +PD T NT++ VF G + + ++P T+ LI A GK
Sbjct: 379 EMKVSNT-EPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKG 437
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
++D ++ +M + +S Y VIEA+ + T M+ G K +T+
Sbjct: 438 GLHDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETY 497
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
LI +A GL+ + + + +A +N VI + E + Y M++
Sbjct: 498 NTLIYMFARGGLYKETEAILLKMGDFGVARERDSFNGVIEGFRQGGQFEEAIKAYVEMEK 557
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
PD T + Y G+ D+ QE ++ASG
Sbjct: 558 SRLVPDERTLEAVLSVYCIAGLVDESVEQFQE-----IKASG 594
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 145/306 (47%), Gaps = 7/306 (2%)
Query: 94 LKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVL 153
L+ K+ A NT+ + F + K+ + +F + E+ +P TY L+
Sbjct: 378 LEMKVSNTEPDAATYNTLIDVFGEGGYFKE---VVTLFHDMAEENV-EPNMETYEGLIFA 433
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
GK G + A+K+ M E+G+ P+ + YT ++ AY + ++ +EA VTLN M + +P
Sbjct: 434 CGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEM-GSKP 492
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
+ TY+TLI ++ E + M + V + N V+ G+ + G F++ +
Sbjct: 493 TIETYNTLIYMFARGGLYKETEAILLKMGDFGVARERDSFNGVIEGFRQGGQFEEAIKAY 552
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
M E + PD T+ +LSV+ G VD +++ + GI P + +++ Y K
Sbjct: 553 VEM-EKSRLVPDERTLEAVLSVYCIAGLVDESVEQFQEIKASGILPNVMCYCMMLAVYAK 611
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA-FSDMGDAKHMEYTFEQMHAEGMKADTK 392
+++ +++ M + +I+ F D + + +EY F+++++EG +
Sbjct: 612 SDRWNEAYELLDEMLTNRASNIHQVIGQMIKGDFDDDSNWQMVEYVFDKLNSEGCGLGMR 671
Query: 393 TFCCLI 398
+ L+
Sbjct: 672 FYNTLL 677
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 168/338 (49%), Gaps = 9/338 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ GK + + A ++F+EM E G++PT ++YT L+ Y + ++EA
Sbjct: 229 PDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNL 288
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+++M+ + C P VYTY+ LI+ + R E +Y++M + P+ V N ++ G
Sbjct: 289 VHEMR-MRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILG 347
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTIL-SVFANKGQVDMMERWYEKFRNFGIDPE 320
++ + + M C P+V T NTI+ S+F +K W E+ + G+ P
Sbjct: 348 RSDRLKEAVELFEEM-RLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPS 406
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT-- 378
+ T++ILI + K +K ++E M + FP + Y ++I + +G AK E
Sbjct: 407 SFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINS---LGKAKRYEAANE 463
Query: 379 -FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
F+++ + + + +I + G F++ + KL +V YNA+I+ +
Sbjct: 464 LFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMV 523
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+AD + E +++ M+E C PD + +I+ A+ G
Sbjct: 524 RADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTG 561
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 141/335 (42%), Gaps = 7/335 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY +L+ LGKSG+ E A V+ M+++G +P L L+ R+ + EA
Sbjct: 299 PTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVEL 358
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACV-DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M+ L NC P+V TY+T+IK+ D + + M + V P++ T +I++ G+
Sbjct: 359 FEEMRLL-NCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGF 417
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K ++ +L M E P ++++ + + +++ +
Sbjct: 418 CKTNRVEKALLLLEEMDEKGF-PPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSS 476
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF--SDMGDAKHMEYT 378
R + ++I +GK +++ + M+KL YN +I +DM D
Sbjct: 477 VRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAF--SL 534
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
F M G D + ++NG A G + + I + YN V+ +
Sbjct: 535 FRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSR 594
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
A E ++ K M K D T+S + EA K
Sbjct: 595 AGLFEEATKLMKEMNSKGFEYDLITYSSILEAVGK 629
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 108/235 (45%), Gaps = 4/235 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ K+ + E A + EM E+G P P Y +L+ + + + A
Sbjct: 405 PSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANEL 464
Query: 202 LNQMKTLPNC-QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
++K NC V Y+ +IK RF L+ +M + P+ N ++ G
Sbjct: 465 FQELKE--NCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGM 522
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+A M D+ + M E+ C PD+ + N IL+ A G + K ++ I P+
Sbjct: 523 VRADMMDEAFSLFRTMEENG-CNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPD 581
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
++N ++G + ++++ + +M+ M F + TY++++EA + + ++M
Sbjct: 582 AVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEAVGKVDEDRNM 636
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 127/279 (45%), Gaps = 14/279 (5%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLL-VLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+A+++FE ++ P TY ++ L P A M ++G+ P+ Y+
Sbjct: 354 EAVELFEEMRLLN-CTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSI 412
Query: 185 LLAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
L+ +C+ + +++A + L +M K P C Y +LI + A R+E L+Q++
Sbjct: 413 LIDGFCKTNRVEKALLLLEEMDEKGFPPCPA---AYCSLINSLGKAKRYEAANELFQELK 469
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
E + + +++ +GK G F++ + + M + C PDV+ N +++ +
Sbjct: 470 ENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEM-KKLGCIPDVYAYNALITGMV---RA 525
Query: 303 DMMERWYEKFRNF---GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
DMM+ + FR G +P+ + NI++ + + + M+ + +Y
Sbjct: 526 DMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSY 585
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
N V+ S G + ++M+++G + D T+ ++
Sbjct: 586 NTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSIL 624
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 120/306 (39%), Gaps = 2/306 (0%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y AL+ N L+ E + T+ M P C S ++K +++ +
Sbjct: 128 YMALIRCLDENRLVGELWRTIQDMVKSP-CAIGPSELSEIVKILGRVKMVNKALSIFYQV 186
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
R P T N V+ + G +++ + + M C PD T + ++S F +
Sbjct: 187 KGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNR 246
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
D R +++ + G+ P + + L+G Y K ++ +++ MR + T TY
Sbjct: 247 DDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTE 306
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+I G + ++ M +G K D LIN + + + L
Sbjct: 307 LIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLN 366
Query: 422 IAENVSFYNAVISACIKAD-DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
NV YN +I + + E +RMK+ P S T+SI+ + + K +K
Sbjct: 367 CTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKA 426
Query: 481 YALEQE 486
L +E
Sbjct: 427 LLLLEE 432
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 74/167 (44%), Gaps = 7/167 (4%)
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
++ G+ +M +K S+ ++ + T+ TYN+VI G + + + +M +EG
Sbjct: 166 IVKILGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEG 225
Query: 387 -MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDL 442
DT T+ LI+ + G ++ S+VRL +++ + Y ++ K +
Sbjct: 226 HCFPDTVTYSALISAF---GKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKV 282
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
E + M+ + C P T++ + K G + Y + + L+
Sbjct: 283 EEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLK 329
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 167/337 (49%), Gaps = 9/337 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ K G+ + A ++ NEM + G++PT ++YT L+A + + + + A
Sbjct: 228 PDTMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSL 287
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+M+ C+PDV+TY+ LI+ A R + + +M P+T+ N ++ G
Sbjct: 288 FEEMRH-QYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLG 346
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTIL-SVFANKGQVDMMERWYEKFRNFGIDPE 320
KAG D ++ M + C P V T NTI+ ++F +K + + W+E+ + GI P
Sbjct: 347 KAGRLDDAMKLFQEM-GTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPS 405
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT-- 378
+ T++ILI + K +K ++E M + FP + Y ++I+A +G AK +
Sbjct: 406 SFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDA---LGKAKRYDLACE 462
Query: 379 -FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
F+++ + ++ + +I AG I+ +KL A +V YNA++S
Sbjct: 463 LFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLA 522
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
+ L E +RM+E C PD +++I+ K+
Sbjct: 523 RTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLQKQ 559
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 137/361 (37%), Gaps = 38/361 (10%)
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI-EPTPELYTALL 186
+Q F ++ Y+ TYM L+ L Q K+ EMV I TP + ++
Sbjct: 107 MQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVV 166
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
++ +A Q+KT CQP Y+++I + ++E + LY +M
Sbjct: 167 RMLGNAKMVSKAIAIFYQIKT-RKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMST--- 222
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
C PD T + ++S F G+ D
Sbjct: 223 --------------------------------EGHCFPDTMTYSALISAFCKLGRRDSAI 250
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ + ++ G+ P T+ + +L+ + K S+ E MR TY +I
Sbjct: 251 QLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGL 310
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G + F +M EG + DT +IN AG + + L+ +V
Sbjct: 311 GKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSV 370
Query: 427 SFYNAVISACIKADDLM-EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
YN +I A ++ E+ ++RMKE P S T+SI+ + + K +K L +
Sbjct: 371 VTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLE 430
Query: 486 E 486
E
Sbjct: 431 E 431
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 174/387 (44%), Gaps = 39/387 (10%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL++F+ +KE P TY LL + GK G + A ++ EM GI P Y L
Sbjct: 302 EALRLFQEMKEAGCC-PNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNEL 360
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+AAY R L DEA + + C PD +TY TLI A A R+E + +M + +
Sbjct: 361 IAAYARAGLCDEAAALKKSLLSKGLC-PDEFTYCTLISAFNRAERYEKALETFTEMRKTN 419
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
TPN VT NI++ YG+ D M +V M E C PD+ T N++L F N G + +
Sbjct: 420 CTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEK-NCTPDLVTWNSLLKSFGNCGMLTEV 478
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ + + G P TFNILI YG+ D + + + + T T+ ++ +
Sbjct: 479 SNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMAS 538
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF---HKVISSVRLASK--- 419
+ G + E ++M G++ LI+ YAN+G F K I + ++K
Sbjct: 539 LAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPL 598
Query: 420 --------------------LQIAEN----------VSFYNAVISACIKADDLMEMERVY 449
Q+A N + +NA+IS C K + ++
Sbjct: 599 SGILCKTFVLAYCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLL 658
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ +++ +PD T++ + Y +EGM
Sbjct: 659 EEIRKAQLKPDGVTYNCLMSMYGREGM 685
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 162/375 (43%), Gaps = 3/375 (0%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
+Q AL++FE LK+ Y Y L+ +L ++ + + +F M EG
Sbjct: 191 EQLPAALELFESLKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVT 250
Query: 182 YTALLAAYC-RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
Y +L Y R D +MK L PD YTY+T+I AC+ + L+Q+
Sbjct: 251 YNVMLDLYGKRGDSWDRIQSLFQEMKDL-EISPDDYTYNTMITACIQNSHCQEALRLFQE 309
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M E PN VT N +L YGK GM + +L M E+A P++ T N +++ +A G
Sbjct: 310 MKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEM-EAAGISPNIVTYNELIAAYARAG 368
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
D + + G+ P+ T+ LI A+ + Y+K MRK TYN
Sbjct: 369 LCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYN 428
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+I+ + M M F+ M + D T+ L+ + N G+ +V + R +
Sbjct: 429 ILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRA 488
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
V +N +I + + +YK + +P TF+ + + A+EG +
Sbjct: 489 GYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQC 548
Query: 481 YALEQEKLQMLLEAS 495
+ QE + L+ S
Sbjct: 549 EKVSQEMAEAGLQLS 563
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 160/362 (44%), Gaps = 39/362 (10%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+ +W +AL+VFE +++ ++ + +L +LG Q A ++F + +
Sbjct: 154 QGKWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQ-------- 205
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
DE++ DVY Y++LI A RF+ TL++
Sbjct: 206 ---------------DESYSL------------DVYAYTSLISILSRARRFDEGITLFET 238
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE--SATCKPDVWTMNTILSVFAN 298
M N VT N++L YGK G D +R+ S E PD +T NT+++
Sbjct: 239 MQREGQRGNAVTYNVMLDLYGKRG--DSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQ 296
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
R +++ + G P T+N L+ YGK M+ + S ++ M T
Sbjct: 297 NSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVT 356
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN +I A++ G + + ++G+ D T+C LI+ + A + K + +
Sbjct: 357 YNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMR 416
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
K N+ YN +I + + L +M +V+K M+EK+C PD T++ + +++ GM
Sbjct: 417 KTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLT 476
Query: 479 KV 480
+V
Sbjct: 477 EV 478
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 139/322 (43%), Gaps = 37/322 (11%)
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
++VF+ ++E+ P T+ LL G G VF EM G P + + L+
Sbjct: 444 MKVFKFMQEKNC-TPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIE 502
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVT 247
Y R +D + V + + QP V T++ L+ + R++ E + Q+M E +
Sbjct: 503 CYGRCGYVDYS-VDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQ 561
Query: 248 PNTVTQNIVLGGYGKAGMF-------DQMERV----LSGMLES----ATCK--------- 283
+ ++ Y +G F D++E+ LSG+L A CK
Sbjct: 562 LSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCGMDNEAQL 621
Query: 284 -----------PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
PD+ N ++S+ A +G ++ + E+ R + P+ T+N L+ YG
Sbjct: 622 ALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYG 681
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
++ MY K VM MR+ TYN ++ +++ G F M A ++ D
Sbjct: 682 REGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNF 741
Query: 393 TFCCLINGYANAGLFHKVISSV 414
TF L+ Y++ GL+ + +S +
Sbjct: 742 TFNTLVGSYSSLGLYKEALSVI 763
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 125/261 (47%), Gaps = 4/261 (1%)
Query: 108 VNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
V T A + + +W Q +V + + E Q + + L+ SGQ RK
Sbjct: 529 VPTFAALMASLAREGRWQQCEKVSQEMAEAGL-QLSDACHAGLIHSYANSGQFFQLRKYI 587
Query: 168 NEMVEEGIEP-TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
+E+ + +P + L + AYC+ + +EA + LNQ+ + PD+ ++ +I C
Sbjct: 588 DELEKSAKQPLSGILCKTFVLAYCKCGMDNEAQLALNQLYDNGH-SPDIKVFNAMISMCA 646
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
E L +++ + + P+ VT N ++ YG+ GM+ + E V+S M + P++
Sbjct: 647 KRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGK-APNL 705
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
T NT+L + G++D R + + P+ TFN L+G+Y +Y + SV+EY
Sbjct: 706 ITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEY 765
Query: 347 MRKLQFPWTSSTYNNVIEAFS 367
M + T T+ +++ ++
Sbjct: 766 MTEHGCQPTQITFKALLDGYN 786
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 153/374 (40%), Gaps = 44/374 (11%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E TY L+ ++ + E A + F EM + P Y L+ Y R +D+
Sbjct: 387 PDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKV 446
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
M+ NC PD+ T+++L+K+ + + ++++M P T NI++ YG
Sbjct: 447 FKFMQE-KNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYG 505
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G D + G+L + +P V T +++ A +G+ E+ ++ G+
Sbjct: 506 RCGYVDYSVDIYKGLLRTGL-QPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSD 564
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRK-LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
LI +Y + ++ ++ + K + P + + A+ G +
Sbjct: 565 ACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCGMDNEAQLALN 624
Query: 381 QMHAEG-----------------------------------MKADTKTFCCLINGYANAG 405
Q++ G +K D T+ CL++ Y G
Sbjct: 625 QLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREG 684
Query: 406 LFHK---VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
+++K V+S +R A K A N+ YN ++ + K + + RV+ M RPD+
Sbjct: 685 MYYKAEEVMSEMRRAGK---APNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNF 741
Query: 463 TFSIMTEAYAKEGM 476
TF+ + +Y+ G+
Sbjct: 742 TFNTLVGSYSSLGL 755
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 4/212 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVL-LGKSGQPELARKVFNEMVEEGIEPTPEL 181
Q+FQ + + L E+ QP G K VL K G A+ N++ + G P ++
Sbjct: 579 QFFQLRKYIDEL-EKSAKQPLSGILCKTFVLAYCKCGMDNEAQLALNQLYDNGHSPDIKV 637
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+ A+++ + I+ A L +++ +PD TY+ L+ + E + +M
Sbjct: 638 FNAMISMCAKRGWIERAVKLLEEIRK-AQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEM 696
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
PN +T N +L Y K G D RV M+ +A +PD +T NT++ +++ G
Sbjct: 697 RRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMV-AARVRPDNFTFNTLVGSYSSLGL 755
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
E G P TF L+ Y +
Sbjct: 756 YKEALSVIEYMTEHGCQPTQITFKALLDGYNR 787
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 110/268 (41%), Gaps = 15/268 (5%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNS------- 193
QP T+ L+ L + G+ + KV EM E G++ + + L+ +Y +
Sbjct: 526 QPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRK 585
Query: 194 LIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQ 253
IDE + Q + C+ V Y C M E L Q D +P+
Sbjct: 586 YIDELEKSAKQPLSGILCKTFVLAY------CKCGMDNEAQLALNQLYDN-GHSPDIKVF 638
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
N ++ K G ++ ++L + A KPD T N ++S++ +G E + R
Sbjct: 639 NAMISMCAKRGWIERAVKLLE-EIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMR 697
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
G P T+N L+ +Y K D + V M + + T+N ++ ++S +G K
Sbjct: 698 RAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYK 757
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGY 401
E M G + TF L++GY
Sbjct: 758 EALSVIEYMTEHGCQPTQITFKALLDGY 785
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 6/119 (5%)
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAG-LFHKVISSVRLASKLQIAENVSFYNAVISACI 437
FE M EG + + T+ +++ Y G + ++ S + L+I+ + YN +I+ACI
Sbjct: 236 FETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACI 295
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
+ E R+++ MKE C P+ T++ + + Y K GM+ E +L + +EA+G
Sbjct: 296 QNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHK-----EASELLVEMEAAG 349
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 167/360 (46%), Gaps = 4/360 (1%)
Query: 126 QALQVFEML-KEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+AL +F+M+ KE P Y ++ K G+ A +F+EM +G++P Y
Sbjct: 246 RALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNL 305
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
++ A C+ +D+A + L QM T QPD TY+ +I R + +++ M R
Sbjct: 306 IIDALCKARAMDKAELVLRQMTT-NGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSR 364
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ PN V N L K G + + M KPD+ + T+L +A++G
Sbjct: 365 GLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGH-KPDIVSYCTLLHGYASEGWFAD 423
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
M + ++ GI + R FNILI AY K+ M D + M++ TY+ VI
Sbjct: 424 MIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVIS 483
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV-RLASKLQIA 423
AFS MG F QM A G++ +T + +I G+ G K V + +K
Sbjct: 484 AFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPR 543
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
++ F+N+VI++ K +M+ ++ + + RPD TF+ + + Y G DK + +
Sbjct: 544 PDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKI 603
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 150/340 (44%), Gaps = 19/340 (5%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF-VTLNQ 204
TY L+ ++ +P+L +F ++ G++ + LL C + +EA V L++
Sbjct: 159 TYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHR 218
Query: 205 MKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER--SVTPNTVTQNIVLGGYGK 262
M L C P+V++YS ++K D + L+Q M + + +PN V N V+ G+ K
Sbjct: 219 MSEL-GCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFK 277
Query: 263 AG-------MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
G +F +M R KPDV T N I+ +D E +
Sbjct: 278 EGETGKACSLFHEMTR--------QGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTN 329
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G P+T T+N +I Y + + + M+ N+ + + G +K
Sbjct: 330 GAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEA 389
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
F+ M A+G K D ++C L++GYA+ G F +I IA + +N +I A
Sbjct: 390 AEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHA 449
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
K + + ++ M+++ PD T+S + A+++ G
Sbjct: 450 YAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMG 489
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 142/330 (43%), Gaps = 18/330 (5%)
Query: 97 KLERKAKAKAWV------NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKL 150
K+ RK K++ + N+ + H K+ A ++F+ + + ++P +Y L
Sbjct: 356 KMFRKMKSRGLIPNIVICNSFLASLCKHGRSKE---AAEIFDSMTAKG-HKPDIVSYCTL 411
Query: 151 LVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPN 210
L G +FN M GI ++ L+ AY + ++D+A + +M+
Sbjct: 412 LHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQ-QG 470
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
PDV TYST+I A R + M R + PNT + ++ G+ G + +
Sbjct: 471 VSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAK 530
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
++S M+ +PD+ N++++ G+V ++ + G P+ TF LI
Sbjct: 531 ELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDG 590
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
Y DK +++ M + TY+ +++ + G F +M +G+K +
Sbjct: 591 YCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPN 650
Query: 391 TKTFCCLINGYANAGL-------FHKVISS 413
T T+ ++ G AG FH++I S
Sbjct: 651 TVTYGIMLAGLFRAGRTVAARKKFHEMIES 680
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 140/338 (41%), Gaps = 4/338 (1%)
Query: 139 FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA 198
+Q T +K L ++ E + + M E G P Y+ +L C NS+ A
Sbjct: 190 IHQITASTLLKCLCYANRT--EEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRA 247
Query: 199 FVTLNQM-KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVL 257
M K C P+V Y+T+I +L+ +M + V P+ VT N+++
Sbjct: 248 LDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLII 307
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
KA D+ E VL M + +PD T N ++ +A G++ + + K ++ G+
Sbjct: 308 DALCKARAMDKAELVLRQMTTNGA-QPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGL 366
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P N + + K + + + + M +Y ++ ++ G M
Sbjct: 367 IPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIG 426
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
F M + G+ AD + F LI+ YA G+ + + ++ +V Y+ VISA
Sbjct: 427 LFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFS 486
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ L + + +M + +P++ + + + + G
Sbjct: 487 RMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHG 524
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 2/197 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY +L L ++G+ ARK F+EM+E G T +Y +L CRN+ DEA +
Sbjct: 648 KPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAII 707
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
++ T+ N + + +T+I A R E + L+ + + PN T +++
Sbjct: 708 LFQKLGTM-NVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINL 766
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + + S M E + P +N I+ + KG++ + K I E
Sbjct: 767 LKDGAVEDANNMFSSM-EKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLE 825
Query: 321 TRTFNILIGAYGKKRMY 337
T ++++ + +K Y
Sbjct: 826 ASTTSLMLSLFSRKGKY 842
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 187/415 (45%), Gaps = 7/415 (1%)
Query: 58 ESAVAAKKRLWKEGEYPGVS--ETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETF 115
+ A A +R+ + G P + T I G+ K I LE N V T
Sbjct: 1000 DEATALLQRMTRSGCSPNIVTYNTIIDGH-CKLGRIDEAYHLLEEMVDGGCQPNVVTYTV 1058
Query: 116 SDHVLKK--QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE 173
K + A+ + E++ E+ Y P TY LL + K + E A ++ + M+++
Sbjct: 1059 LLDAFCKCGKAEDAIGLVEVMVEKG-YVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQK 1117
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
G P Y ++A C+ + + E + L QM + NC PD+ T++T+I A R ++
Sbjct: 1118 GCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLS-NNCVPDIVTFNTIIDAMCKTYRVDI 1176
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
L+ + E TPN VT N ++ G K+ FDQ E +L M C PD+ T NT++
Sbjct: 1177 AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVI 1236
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
+VD + + + + G+ P+ T++I+I + K R D+ ++V+E M K F
Sbjct: 1237 DGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFD 1296
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
+ TY +I+ F G+ + + ++G D TF I+ + G +
Sbjct: 1297 PGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGEL 1356
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ + + + YN ++ A + +++ M++ C PD+ T++ +
Sbjct: 1357 LETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLV 1411
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 155/362 (42%), Gaps = 5/362 (1%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y+P TY ++ + + E A +V M++ G P Y+ +++ +C+ + EA
Sbjct: 366 YRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAH 425
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L QM C+PDV STLI A A + + L + P+ V +I++
Sbjct: 426 DLLEQM-IRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHA 484
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
KA + E L M+++ C PDV T N+++ +++ +++ R G+ P
Sbjct: 485 LCKAKRLPEAESWLDVMVKN-RCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMP 543
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ T++I+I ++ K D ++E M++ + TY+ +I G F
Sbjct: 544 DVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVF 603
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
++M G + T+ LI+G + + + K + Y +I+ A
Sbjct: 604 QEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNA 663
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGHWQ 499
L E RV + MK+K C PD T+ + A K + + +EQ +M G W
Sbjct: 664 SRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQK---TNNLELVEQLLKEMEATEEGQWN 720
Query: 500 QN 501
N
Sbjct: 721 AN 722
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 153/357 (42%), Gaps = 39/357 (10%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
ALQV+ + + P T+ L+ L ++G A ++ EM G+ L+ ++
Sbjct: 863 ALQVY---RNKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVI 919
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
C +D A +M+ +C PDV+TYST++ + V + + + L +DM +
Sbjct: 920 KGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGC 979
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
+PN VT + +L G KAG D+ +L M S C P++ T NTI+ G++D
Sbjct: 980 SPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSG-CSPNIVTYNTIIDGHCKLGRIDEAY 1038
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
E+ + G P T+ +L+ A+ K + ++E M + + TYN++++ F
Sbjct: 1039 HLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMF 1098
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
K + + C L++ G V+S
Sbjct: 1099 CK-------------------KDEVERACQLLSSMIQKGCVPNVVS-------------- 1125
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
YN VI+ KA + E + ++M +C PD TF+ + +A K D Y L
Sbjct: 1126 --YNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYEL 1180
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 143/370 (38%), Gaps = 38/370 (10%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY LL L K+G+ + A + M G P Y ++ +C+ IDEA+
Sbjct: 981 PNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHL 1040
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFE----LIET--------------------- 236
L +M CQP+V TY+ L+ A + E L+E
Sbjct: 1041 LEEMVD-GGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFC 1099
Query: 237 ----------LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
L M ++ PN V+ N V+ G KA + +L ML S C PD+
Sbjct: 1100 KKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQML-SNNCVPDI 1158
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
T NTI+ +VD+ + + G P T+N L+ K R +D+ ++
Sbjct: 1159 VTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLRE 1218
Query: 347 M-RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
M RK TYN VI+ F QM ++G+ D T+ +I+
Sbjct: 1219 MTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWR 1278
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ + + L K Y +I K +L + + + + K PD TFS
Sbjct: 1279 FMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFS 1338
Query: 466 IMTEAYAKEG 475
I + +K G
Sbjct: 1339 IFIDWLSKRG 1348
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 165/412 (40%), Gaps = 51/412 (12%)
Query: 70 EGEYPGVS---ETSIPGY--RSKRTPIKNLKKKLERKA-KAKAWVN-TVAETFSDHVLKK 122
EG++ G + T I G+ K P L ++ RK KA A V+ ++ D
Sbjct: 154 EGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCD---AG 210
Query: 123 QWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
Q A+ F EM K P P TY ++ L KS + + A ++ EMV+ G P
Sbjct: 211 QCSDAVLHFREMSKTCP---PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFS 267
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y +L +C+ + ++ A L QM T C PDV +Y+T+I + + + M
Sbjct: 268 YNTVLHGFCKANRVENALWLLEQMVT-RGCPPDVVSYTTVINGLCKLDQVDEACRVMDKM 326
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+R PN +T ++ G+ + G D ++ M E +P+ T N I+ VF +
Sbjct: 327 IQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGY-RPNAITYNNIMHVFCRRND 385
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
MER ++ V++ M + P + Y+
Sbjct: 386 ---MERAHQ--------------------------------VLQMMIQTGCPPDAINYST 410
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+I F G + EQM G + D LI+ A +R++ +
Sbjct: 411 IISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMD 470
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
A +V Y+ +I A KA L E E M + C PD T++ + + K
Sbjct: 471 CAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCK 522
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 121/276 (43%), Gaps = 1/276 (0%)
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
C P+++T++ LI A L ++M V N + N+V+ G A D
Sbjct: 873 CSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSAL 932
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
+ M ES +C PDV+T +TI+ G+VD R E + G P T++ L+
Sbjct: 933 ELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHG 992
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
K D+ +++++ M + TYN +I+ +G + E+M G + +
Sbjct: 993 LCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPN 1052
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
T+ L++ + G I V + + N+ YN+++ K D++ ++
Sbjct: 1053 VVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLS 1112
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALEQ 485
M +K C P+ +++ + K +++ V LEQ
Sbjct: 1113 SMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQ 1148
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 141/332 (42%), Gaps = 18/332 (5%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ ++ + K+ + ++A ++FN + E G P Y +L+ C++ D+A
Sbjct: 1156 PDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYL 1215
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L +M C PD+ TY+T+I + R + L+ M + P+ VT +IV+
Sbjct: 1216 LREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLC 1275
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K D+ VL ML++ P T T++ F G +D + + G P+
Sbjct: 1276 KWRFMDEANNVLELMLKNGF-DPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDV 1334
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
TF+I I K+ + ++E M + + TYN +++ F D + FE
Sbjct: 1335 VTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEV 1394
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSV-----------------RLASKLQIAE 424
M G + D T+ L+ + + +++ V +L + +++
Sbjct: 1395 MRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEA 1454
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
+V A++ K + +V++ M +++
Sbjct: 1455 DVRLGCAIVDMFGKCGSPQDARKVFEGMDQRN 1486
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 108/262 (41%), Gaps = 2/262 (0%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
D TYSTLI + A + L+ +M+ + + + +L G AG + VL
Sbjct: 160 DTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCS--DAVL 217
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
S TC PD T NT+++ + ++D R E+ + G P ++N ++ + K
Sbjct: 218 HFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCK 277
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+ ++E M P +Y VI + ++M G + + T
Sbjct: 278 ANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVIT 337
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+ L++G+ G + VR ++ N YN ++ + +D+ +V + M
Sbjct: 338 YGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMI 397
Query: 454 EKHCRPDSETFSIMTEAYAKEG 475
+ C PD+ +S + + K G
Sbjct: 398 QTGCPPDAINYSTIISGFCKAG 419
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 19/188 (10%)
Query: 153 LLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQ 212
+ GK G P+ ARKVF M + + L++A+L Y + ++AF L ++ L +
Sbjct: 1465 MFGKCGSPQDARKVFEGMDQRNV----VLWSAMLGVYVFHKQEEQAF-GLWRVMGLEGVE 1519
Query: 213 PDVYTYSTLIKACVDAMRFE-LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
PD T+ +L+ C A + ++ + + P + V+ G+ G+ ++ E
Sbjct: 1520 PDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAED 1579
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
++ GM CKP T N +LS + G + R E ++P ++ +L Y
Sbjct: 1580 LMLGM----PCKPSAATWNCLLSAYKICGDFERALRVAE------LNPTQASYLLLSNMY 1629
Query: 332 GKKRMYDK 339
+ YDK
Sbjct: 1630 AQ---YDK 1634
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
N+L+ A+ + +D S +E Q+ + TY+ +I F G F++M+
Sbjct: 133 LNVLVKAHQYSQAHDLFRSRIEG----QWGGDTVTYSTLISGFIRAGKILPAYELFDEMN 188
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
+G+KA ++ G +AG + R SK ++V+ YN +I+ K+D L
Sbjct: 189 RKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVT-YNTMINGLSKSDRLD 247
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALEQ 485
+ R+ + M + P+ +++ + + K + + ++ LEQ
Sbjct: 248 DAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQ 290
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 106/254 (41%), Gaps = 39/254 (15%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL------------LAAY 189
P TY LL + E A +F M + G EP YT L L A
Sbjct: 1367 PDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAE 1426
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM----RFELIETLYQDMDERS 245
S++D F +++ + +V L A VD + +++ MD+R
Sbjct: 1427 VSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQR- 1485
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGM-----LESATCKPDVWTMNTILSVFANKG 300
N V + +LG Y +F + E G+ LE +PD T ++L++ + G
Sbjct: 1486 ---NVVLWSAMLGVY----VFHKQEEQAFGLWRVMGLEGV--EPDAVTFLSLLTMCCHAG 1536
Query: 301 QVD-MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW--TSS 357
+D ++ + R++G++P F+ +I G+ + ++ +M L P +++
Sbjct: 1537 LLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDLM-----LGMPCKPSAA 1591
Query: 358 TYNNVIEAFSDMGD 371
T+N ++ A+ GD
Sbjct: 1592 TWNCLLSAYKICGD 1605
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 181/380 (47%), Gaps = 19/380 (5%)
Query: 119 VLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPT 178
V + W +AL+++E L Q +Y +L +LGK+ Q +A ++F + E I T
Sbjct: 205 VGQSSWQRALELYECLTMQQWYATNARMVATILSVLGKANQEGIAVEIFAK-AESVIADT 263
Query: 179 PELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI----KAC--VDAMRFE 232
++Y A++ Y RN ++ N M+ C+PD+ +++TLI K+C V + E
Sbjct: 264 VQVYNAMMGVYARNGNFEKVNEMFNLMRE-RGCEPDIVSFNTLINAKVKSCATVSGLAIE 322
Query: 233 LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTI 292
L++ ++ + + P+ +T N ++ + + V S M ES C+PD+WT N +
Sbjct: 323 LLD----EVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHM-ESNRCQPDLWTYNAM 377
Query: 293 LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF 352
+SV+ G E +EK ++ G P+ T+N L+ A+ K+ +K+ + E M K+ F
Sbjct: 378 ISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGF 437
Query: 353 PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH---K 409
TYN +I + G + M + G D T+ LI+ A K
Sbjct: 438 GKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASK 497
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
V+S + A + + Y+A+I A K +E E + RM+E + D +S+M +
Sbjct: 498 VMSEMLDAG---VKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLD 554
Query: 470 AYAKEGMNDKVYALEQEKLQ 489
+ + K AL QE ++
Sbjct: 555 FFLRFNEIKKAAALYQEMIE 574
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 148/328 (45%), Gaps = 43/328 (13%)
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
LA ++ +E+ + G+ P Y L++A R S + EA + M++ CQPD++TY+ +
Sbjct: 319 LAIELLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMES-NRCQPDLWTYNAM 377
Query: 222 IKA---CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
I C A++ E L++ + +P+ VT N +L + K G +++ + M++
Sbjct: 378 ISVYGRCGFALK---AEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVK 434
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
K D T NTI+ ++ G+ D R Y ++ G +P+ T+ +LI GK +
Sbjct: 435 MGFGK-DEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIE 493
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+ S VM M T TY+ +I A++ +G E TF +M G+KAD + ++
Sbjct: 494 EASKVMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVML 553
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
+ + ++ +++ + +Y+ M E
Sbjct: 554 DFF-----------------------------------LRFNEIKKAAALYQEMIEAGFT 578
Query: 459 PDSETFSIMTEAYAKEGMNDKVYALEQE 486
PD+ + +M A +E M D + + Q+
Sbjct: 579 PDTGLYEVMLPALVRENMGDVIERVVQD 606
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 160/354 (45%), Gaps = 3/354 (0%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K W A + E L+++ ++ + L+ SG E AR +FN M+ EG PT E
Sbjct: 803 KMWQSAESIVENLRQRCSKMDRK-VWNALIHAYAFSGCYERARAIFNTMMREGPSPTVES 861
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
LL A + + E +V + +++ + + + + +++A A ++ +Y M
Sbjct: 862 VNGLLQALIVDGRLSELYVVIQELQDM-DLKISKSSILLMLEAFAQAGNLFEVQKVYNGM 920
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
P +++G + + +LS M E A KPD+ N++L ++++ +
Sbjct: 921 KAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGE-AGFKPDLQIFNSVLKLYSSIEE 979
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
M Y+ ++ G+ P+ T+N LI Y + ++ S+M M+ L TY +
Sbjct: 980 FQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRS 1039
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+I AFS E FE++ + G K D + ++ Y +G K + + + +
Sbjct: 1040 MIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAG 1099
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
I N + + ++ + K+ E +R+ K ++ D+ +S + +AY K+G
Sbjct: 1100 IEPNTATMHLLMVSYGKSGQPEEADRILKNLRTMGAVLDTLPYSSVIDAYLKKG 1153
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 126/283 (44%), Gaps = 7/283 (2%)
Query: 125 FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
F+ +V+ +K ++ P Y ++ LL + + R + +EM E G +P +++ +
Sbjct: 911 FEVQKVYNGMKAAGYF-PTMHLYRLMIGLLCRFKRVRDVRVMLSEMGEAGFKPDLQIFNS 969
Query: 185 LLAAYCRNSLIDE--AFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
+L Y S I+E + QM PD TY+TLI R E +L M
Sbjct: 970 VLKLY---SSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHKMK 1026
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
+ P T ++ + K ++DQ E + L S K D + ++ ++ G
Sbjct: 1027 SLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEE-LRSNGYKLDRSFYHLMMKMYRTSGDH 1085
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
E E + GI+P T T ++L+ +YGK ++ +++ +R + + Y++V
Sbjct: 1086 QKAENLLEIMKEAGIEPNTATMHLLMVSYGKSGQPEEADRILKNLRTMGAVLDTLPYSSV 1145
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
I+A+ GDAK +M ++ D + + C I + +G
Sbjct: 1146 IDAYLKKGDAKAGIEKLTEMKEAAIEPDHRIWTCFIRAASLSG 1188
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
NT+ + H + +AL+++ +K P TY L+ LLGK+ + E A KV +
Sbjct: 445 NTIIHMYGKH---GRHDEALRLYRDMKSSG-RNPDAVTYTVLIDLLGKASKIEEASKVMS 500
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
EM++ G++PT Y+AL+ AY + EA T N+M+ + D YS ++ +
Sbjct: 501 EMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRE-SGIKADHLAYSVMLDFFLRF 559
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
+ LYQ+M E TP+T ++L + M D +ERV+ E + P
Sbjct: 560 NEIKKAAALYQEMIEAGFTPDTGLYEVMLPALVRENMGDVIERVVQDTKELGSMNP---- 615
Query: 289 MNTILSVFANKGQVD 303
+ I SV G D
Sbjct: 616 -HDISSVLVKGGCYD 629
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/360 (17%), Positives = 146/360 (40%), Gaps = 37/360 (10%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR-----------------NSLIDEA 198
KS Q ++A ++F++M G+EP+ LY ++++ YCR + ++D
Sbjct: 729 KSEQFDIASQLFSDMRFNGVEPSECLYQSMVSVYCRIGFPETAQHLLYHAEKNDIILDNV 788
Query: 199 FV-------TLNQMKTLPNCQP------------DVYTYSTLIKACVDAMRFELIETLYQ 239
V T ++K + + D ++ LI A + +E ++
Sbjct: 789 TVHIIDIIETYGKLKMWQSAESIVENLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFN 848
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
M +P + N +L G ++ V+ L+ K ++ +L FA
Sbjct: 849 TMMREGPSPTVESVNGLLQALIVDGRLSELYVVIQE-LQDMDLKISKSSILLMLEAFAQA 907
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G + +++ Y + G P + ++IG + + + ++ M + F +
Sbjct: 908 GNLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGEAGFKPDLQIF 967
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
N+V++ +S + + ++M ++ + G+ D +T+ LI Y + +S +
Sbjct: 968 NSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHKMKS 1027
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
L + Y ++I+A K + E +++ ++ + D + +M + Y G + K
Sbjct: 1028 LGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQK 1087
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 175/390 (44%), Gaps = 39/390 (10%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL++F+ +KE P TY LL + GK G + A ++ EM GI P Y L
Sbjct: 163 EALRLFQEMKEAGCC-PNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNEL 221
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+AAY R L DEA + + C PD +TY TLI A A R+E + +M + +
Sbjct: 222 IAAYARAGLCDEAAALKKSLLSKGLC-PDEFTYCTLISAFNRAERYEKALETFTEMRKTN 280
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
TPN VT NI++ YG+ D M +V M E C PD+ T N++L F N G + +
Sbjct: 281 CTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEK-NCTPDLVTWNSLLKSFGNCGMLTEV 339
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ + + G P TFNILI YG+ D + + + + T T+ ++ +
Sbjct: 340 SNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMAS 399
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF---HKVISSVRLASK--- 419
+ G + E ++M G++ LI+ YAN+G F K I + ++K
Sbjct: 400 LAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPL 459
Query: 420 --------------------LQIAEN----------VSFYNAVISACIKADDLMEMERVY 449
Q+A N + +NA+IS C K + ++
Sbjct: 460 SGILCKTFVLAYCKCCMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLL 519
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ +++ +PD T++ + Y +EGM K
Sbjct: 520 EEIRKAQLKPDGVTYNCLMSMYGREGMYHK 549
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 160/370 (43%), Gaps = 3/370 (0%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL++FE LK+ Y Y L+ +L ++ + + +F M EG Y +L
Sbjct: 57 ALELFESLKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVML 116
Query: 187 AAYC-RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
Y R D +MK L PD YTY+T+I AC+ + L+Q+M E
Sbjct: 117 DLYGKRGDSWDRIQSLFQEMKDL-EISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAG 175
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN VT N +L YGK GM + +L M E+A P++ T N +++ +A G D
Sbjct: 176 CCPNRVTYNALLDVYGKGGMHKEASELLVEM-EAAGISPNIVTYNELIAAYARAGLCDEA 234
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ + G+ P+ T+ LI A+ + Y+K MRK TYN +I+
Sbjct: 235 AALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDI 294
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ M M F+ M + D T+ L+ + N G+ +V + R +
Sbjct: 295 YGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPG 354
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
V +N +I + + +YK + +P TF+ + + A+EG + + Q
Sbjct: 355 VDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQ 414
Query: 486 EKLQMLLEAS 495
E + L+ S
Sbjct: 415 EMAEAGLQLS 424
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 160/362 (44%), Gaps = 39/362 (10%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+ +W +AL+VFE +++ ++ + +L +LG Q A ++F + +
Sbjct: 15 QGKWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQ-------- 66
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
DE++ DVY Y++LI A RF+ TL++
Sbjct: 67 ---------------DESY------------SLDVYAYTSLISILSRARRFDEGITLFET 99
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE--SATCKPDVWTMNTILSVFAN 298
M N VT N++L YGK G D +R+ S E PD +T NT+++
Sbjct: 100 MQREGQRGNAVTYNVMLDLYGKRG--DSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQ 157
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
R +++ + G P T+N L+ YGK M+ + S ++ M T
Sbjct: 158 NSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVT 217
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN +I A++ G + + ++G+ D T+C LI+ + A + K + +
Sbjct: 218 YNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMR 277
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
K N+ YN +I + + L +M +V+K M+EK+C PD T++ + +++ GM
Sbjct: 278 KTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLT 337
Query: 479 KV 480
+V
Sbjct: 338 EV 339
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 137/322 (42%), Gaps = 37/322 (11%)
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
++VF+ ++E+ P T+ LL G G VF EM G P + + L+
Sbjct: 305 MKVFKFMQEKNC-TPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIE 363
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVT 247
Y R +D + V + + QP V T++ L+ + R++ E + Q+M E +
Sbjct: 364 CYGRCGYVDYS-VDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQ 422
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERV-----------LSGMLES----ATCK--------- 283
+ ++ Y +G F Q+ + LSG+L A CK
Sbjct: 423 LSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNEAQL 482
Query: 284 -----------PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
PD+ N ++S+ A +G ++ + E+ R + P+ T+N L+ YG
Sbjct: 483 ALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYG 542
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
++ MY K VM MR+ TYN ++ +++ G F M A ++ D
Sbjct: 543 REGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNF 602
Query: 393 TFCCLINGYANAGLFHKVISSV 414
TF L+ Y++ GL+ + +S +
Sbjct: 603 TFNTLVGSYSSLGLYKEALSVI 624
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 154/374 (41%), Gaps = 44/374 (11%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E TY L+ ++ + E A + F EM + P Y L+ Y R +D+
Sbjct: 248 PDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKV 307
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
M+ NC PD+ T+++L+K+ + + ++++M P T NI++ YG
Sbjct: 308 FKFMQE-KNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYG 366
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G D + G+L + +P V T +++ A +G+ E+ ++ G+
Sbjct: 367 RCGYVDYSVDIYKGLLRTGL-QPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSD 425
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRK-LQFPWTS------------------------ 356
LI +Y + ++ ++ + K + P +
Sbjct: 426 ACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNEAQLALN 485
Query: 357 -----------STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
+N +I + G + E++ +K D T+ CL++ Y G
Sbjct: 486 QLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREG 545
Query: 406 LFHK---VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
++HK V+S +R A K A N+ YN ++ + K + + RV+ M RPD+
Sbjct: 546 MYHKAEEVMSEMRRAGK---APNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNF 602
Query: 463 TFSIMTEAYAKEGM 476
TF+ + +Y+ G+
Sbjct: 603 TFNTLVGSYSSLGL 616
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 112/268 (41%), Gaps = 15/268 (5%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNS------- 193
QP T+ L+ L + G+ + KV EM E G++ + + L+ +Y +
Sbjct: 387 QPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRK 446
Query: 194 LIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQ 253
IDE + Q + C+ V Y K C+D + LY + +P+
Sbjct: 447 YIDELEKSAKQPLSGILCKTFVLAYC---KCCMDNEAQLALNQLYDN----GHSPDIKVF 499
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
N ++ K G ++ ++L + A KPD T N ++S++ +G E + R
Sbjct: 500 NAMISMCAKRGWIERAVKLLEE-IRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMR 558
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
G P T+N L+ +Y K D + V M + + T+N ++ ++S +G K
Sbjct: 559 RAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYK 618
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGY 401
E M G + TF L++GY
Sbjct: 619 EALSVIEYMTEHGCQPTQITFKALLDGY 646
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 6/119 (5%)
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAG-LFHKVISSVRLASKLQIAENVSFYNAVISACI 437
FE M EG + + T+ +++ Y G + ++ S + L+I+ + YN +I+ACI
Sbjct: 97 FETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACI 156
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
+ E R+++ MKE C P+ T++ + + Y K GM+ E +L + +EA+G
Sbjct: 157 QNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHK-----EASELLVEMEAAG 210
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 155/317 (48%), Gaps = 11/317 (3%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
AR++FN MV+ G+EP Y L+ YC+ ++DEA V ++ N P + +Y++LI
Sbjct: 319 ARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCN-KNLVPTIASYNSLI 377
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
++ R ++ L +M + P+ VT NI++ K G + VL M++
Sbjct: 378 DGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGV- 436
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
KP++ T N ++ + + V++ + + + G++P+ +N+LI Y K M D+
Sbjct: 437 KPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIV 496
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+ + MR ++YN++I+ ++G H++ ++M G D T+ L++ +
Sbjct: 497 LFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFC 556
Query: 403 NAGLFHKVISSVRLASKLQIAENV--SFY--NAVISACIKADDLMEMERVYKRMKEKHCR 458
F K IS R QI E + FY +A++ K + L E K + C
Sbjct: 557 KTQPFDKAISLFR-----QIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCS 611
Query: 459 PDSETFSIMTEAYAKEG 475
P+ +T++I+ A K+G
Sbjct: 612 PNVQTYTILINALCKDG 628
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 173/378 (45%), Gaps = 6/378 (1%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
NT+ F + F+AL + L Q Y + TY L+ L K+GQ + A +
Sbjct: 129 NTIINGFC---INGMIFKALDFCQNLLAQG-YLFDQFTYGTLINGLSKNGQIKAALHLLQ 184
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
EM + ++P +Y+AL+ C++ + +A +Q+ D TY++LI C
Sbjct: 185 EMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGE-RGILLDAVTYNSLIDGCCSV 243
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
R++ + L M +V P+ T NI++ K G + + VL+ M + KPD+ T
Sbjct: 244 GRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGE-KPDIVT 302
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
N ++ + ++ V + + G++P+ +N+LI Y K +M D+ + + +
Sbjct: 303 YNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELC 362
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
T ++YN++I+ + G H++ ++MH D T+ LI+ G
Sbjct: 363 NKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRIL 422
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ + + + K + N+ YNA++ +++ + ++ RM + PD ++++
Sbjct: 423 EALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLI 482
Query: 469 EAYAKEGMNDKVYALEQE 486
Y K M D+ L +E
Sbjct: 483 NGYCKTEMVDEAIVLFKE 500
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 157/345 (45%), Gaps = 4/345 (1%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ G+ + ++ +MV E ++P + L+ A C+ I EA L M
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+PD+ TY+ L++ L+ M +R + P+ + N+++ GY K M
Sbjct: 292 SKRGE-KPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKM 350
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D+ VL L + P + + N+++ N G++ +++ ++ P+ T+N
Sbjct: 351 VDE-AMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYN 409
Query: 326 ILIGAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
ILI A K+ R+ + + ++ M+K P TYN +++ + + + F +M
Sbjct: 410 ILIDALCKEGRILEALGVLVMMMKKGVKP-NIVTYNAMMDGYCLRNNVNVAKDIFNRMVK 468
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
G++ D + LINGY + + I + + +++ YN++I +
Sbjct: 469 SGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPH 528
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
++ + M + PD T++I+ +A+ K DK +L ++ ++
Sbjct: 529 VQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE 573
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 150/372 (40%), Gaps = 37/372 (9%)
Query: 139 FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA 198
F P + KLL + + G A +F ++ +GI P+ +T L+ Y S A
Sbjct: 50 FPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFA 109
Query: 199 FVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIE---------------------- 235
F L + QP++ T++T+I C++ M F+ ++
Sbjct: 110 FSLLATILK-SGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLIN 168
Query: 236 ------------TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK 283
L Q+M++ SV PN V + ++ G K G + S + E
Sbjct: 169 GLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILL 228
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
D T N+++ + G+ + + K +DP+ TFNILI A K+ + V
Sbjct: 229 -DAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGV 287
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ M K TYN ++E + + F +M G++ D + LI+GY
Sbjct: 288 LAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCK 347
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
+ + + + + ++ YN++I + + ++++ M PD T
Sbjct: 348 TKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVT 407
Query: 464 FSIMTEAYAKEG 475
++I+ +A KEG
Sbjct: 408 YNILIDALCKEG 419
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 85/200 (42%), Gaps = 4/200 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ +F+ ++ + P +Y L+ L G+ +++ +EM + G P Y L
Sbjct: 493 EAIVLFKEMRHKNLI-PDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNIL 551
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L A+C+ D+A Q+ + PD YT ++ + ++ E + +
Sbjct: 552 LDAFCKTQPFDKAISLFRQI--VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHG 609
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+PN T I++ K G F + +LS M E PD T I+ V + + D
Sbjct: 610 CSPNVQTYTILINALCKDGSFGEAMLLLSKM-EDNDRPPDAITFEIIIGVLLQRNETDKA 668
Query: 306 ERWYEKFRNFGIDPETRTFN 325
E+ E+ G+ ++ N
Sbjct: 669 EKLREEMIARGLVNIEKSLN 688
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 155/317 (48%), Gaps = 11/317 (3%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
AR++FN MV+ G+EP Y L+ YC+ ++DEA V ++ N P + +Y++LI
Sbjct: 319 ARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCN-KNLVPTIASYNSLI 377
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
++ R ++ L +M + P+ VT NI++ K G + VL M++
Sbjct: 378 DGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGV- 436
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
KP++ T N ++ + + V++ + + + G++P+ +N+LI Y K M D+
Sbjct: 437 KPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIV 496
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+ + MR ++YN++I+ ++G H++ ++M G D T+ L++ +
Sbjct: 497 LFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFC 556
Query: 403 NAGLFHKVISSVRLASKLQIAENV--SFY--NAVISACIKADDLMEMERVYKRMKEKHCR 458
F K IS R QI E + FY +A++ K + L E K + C
Sbjct: 557 KTQPFDKAISLFR-----QIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCS 611
Query: 459 PDSETFSIMTEAYAKEG 475
P+ +T++I+ A K+G
Sbjct: 612 PNVQTYTILINALCKDG 628
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 173/378 (45%), Gaps = 6/378 (1%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
NT+ F + F+AL + L Q Y + TY L+ L K+GQ + A +
Sbjct: 129 NTIINGFC---INGMIFKALDFCQNLLAQG-YLFDQFTYGTLINGLSKNGQIKAALHLLQ 184
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
EM + ++P +Y+AL+ C++ + +A +Q+ D TY++LI C
Sbjct: 185 EMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGE-RGILLDAVTYNSLIDGCCSV 243
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
R++ + L M +V P+ T NI++ K G + + VL+ M+ KPD+ T
Sbjct: 244 GRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLA-MMSKRGEKPDIVT 302
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
N ++ + ++ V + + G++P+ +N+LI Y K +M D+ + + +
Sbjct: 303 YNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELC 362
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
T ++YN++I+ + G H++ ++MH D T+ LI+ G
Sbjct: 363 NKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRIL 422
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ + + + K + N+ YNA++ +++ + ++ RM + PD ++++
Sbjct: 423 EALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLI 482
Query: 469 EAYAKEGMNDKVYALEQE 486
Y K M D+ L +E
Sbjct: 483 NGYCKTEMVDEAIVLFKE 500
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 157/345 (45%), Gaps = 4/345 (1%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ G+ + ++ +MV E ++P + L+ A C+ I EA L M
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+PD+ TY+ L++ L+ M +R + P+ + N+++ GY K M
Sbjct: 292 SKRGE-KPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKM 350
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D+ VL L + P + + N+++ N G++ +++ ++ P+ T+N
Sbjct: 351 VDE-AMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYN 409
Query: 326 ILIGAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
ILI A K+ R+ + + ++ M+K P TYN +++ + + + F +M
Sbjct: 410 ILIDALCKEGRILEALGVLVMMMKKGVKP-NIVTYNAMMDGYCLRNNVNVAKDIFNRMVK 468
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
G++ D + LINGY + + I + + +++ YN++I +
Sbjct: 469 SGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPH 528
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
++ + M + PD T++I+ +A+ K DK +L ++ ++
Sbjct: 529 VQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE 573
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 150/372 (40%), Gaps = 37/372 (9%)
Query: 139 FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA 198
F P + KLL + + G A +F ++ +GI P+ +T L+ Y S A
Sbjct: 50 FPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFA 109
Query: 199 FVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIE---------------------- 235
F L + QP++ T++T+I C++ M F+ ++
Sbjct: 110 FSLLATILK-SGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLIN 168
Query: 236 ------------TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK 283
L Q+M++ SV PN V + ++ G K G + S + E
Sbjct: 169 GLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILL 228
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
D T N+++ + G+ + + K +DP+ TFNILI A K+ + V
Sbjct: 229 -DAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGV 287
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ M K TYN ++E + + F +M G++ D + LI+GY
Sbjct: 288 LAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCK 347
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
+ + + + + ++ YN++I + + ++++ M PD T
Sbjct: 348 TKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVT 407
Query: 464 FSIMTEAYAKEG 475
++I+ +A KEG
Sbjct: 408 YNILIDALCKEG 419
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 4/192 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ +F+ ++ + P +Y L+ L G+ +++ +EM + G P Y L
Sbjct: 493 EAIVLFKEMRHKNLI-PDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNIL 551
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L A+C+ D+A Q+ + PD YT ++ + ++ E + +
Sbjct: 552 LDAFCKTQPFDKAISLFRQI--VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHG 609
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+PN T I++ K G F + +LS M E PD T I+ V + + D
Sbjct: 610 CSPNVQTYTILINALCKDGSFGEAMLLLSKM-EDNDRPPDAITFEIIIGVLLQRNETDKA 668
Query: 306 ERWYEKFRNFGI 317
E+ E+ G+
Sbjct: 669 EKLREEMIARGL 680
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 161/339 (47%), Gaps = 3/339 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ GK G + A ++F+EM E G+ PT ++YT LL Y + +++A
Sbjct: 232 PDTVTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDV 291
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ +MK C V+TY+ IK A R + ++ DM + P+ V N ++ G
Sbjct: 292 IKEMKD-KGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILG 350
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTIL-SVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + ++ M ES CKP+V T NT++ ++F K W+EK + GI P
Sbjct: 351 KVGRLEVTLKLFRKM-ESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPS 409
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+ T++ILI + K +K ++E M + FP + Y ++I + + + F
Sbjct: 410 SFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFL 469
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
++ + + + +I + G + + KL +V YNA++S ++A
Sbjct: 470 ELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAG 529
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ E + + + M E C PD + +I+ A+ G+ D+
Sbjct: 530 MIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDR 568
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 10/228 (4%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL---LAAYCRNSLIDEA 198
P TY L+ K+ + E A + EM E+G P P Y +L L R +E
Sbjct: 408 PSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANEL 467
Query: 199 FVTLNQMKTLPNC-QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVL 257
F+ L + NC Y+ +IK R L+ +M++ P+ N ++
Sbjct: 468 FLELKE-----NCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALM 522
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
G +AGM D+ + +L M E+ C PD+ + N IL+ A G D + K ++ I
Sbjct: 523 SGMVRAGMIDEAQSLLRTMDENG-CSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSII 581
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
P+ ++N ++G ++++ + +M M F + + TY +++EA
Sbjct: 582 KPDAVSYNTVLGCLSHAGLFEEAAKLMREMNLKGFEYNNITYTSILEA 629
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 115/306 (37%), Gaps = 1/306 (0%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+ AL+ + E + T+ M C S ++K A +++ +
Sbjct: 130 FMALIHSLDEAGFYGEMWKTIQDMVRSSTCVISSVYLSEIVKLLGKAKMVNKALSVFYQI 189
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
R P T N ++ + G +++ + + M C PD T + ++S F G
Sbjct: 190 KGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFGKLGH 249
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
D R +++ + G+ P + + L+G Y K +K V++ M+ T TY
Sbjct: 250 YDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVFTYTE 309
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
I+ G F M +G K D LIN G + R Q
Sbjct: 310 WIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFRKMESWQ 369
Query: 422 IAENVSFYNAVISACIKAD-DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
NV YN VI A + E +++MK P S T+SI+ + + K +K
Sbjct: 370 CKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFTYSILIDGFCKTNRIEKA 429
Query: 481 YALEQE 486
L +E
Sbjct: 430 LLLLEE 435
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 104/241 (43%), Gaps = 20/241 (8%)
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKA 224
F +M GI P+ Y+ L+ +C+ + I++A + L +M K P C Y +LI +
Sbjct: 398 FEKMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPA---AYCSLINS 454
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------MFDQMERVLSGML 277
R+E L+ ++ E + +++ +GK G +F++ME++ S
Sbjct: 455 LGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGS--- 511
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
KPDV+ N ++S G +D + G P+ + NI++ + +
Sbjct: 512 -----KPDVYAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVP 566
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
D+ + M+ + +YN V+ S G + +M+ +G + + T+ +
Sbjct: 567 DRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMNLKGFEYNNITYTSI 626
Query: 398 I 398
+
Sbjct: 627 L 627
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 165/354 (46%), Gaps = 3/354 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A VFE +K F P + TY LL + GKS + + A +V EM G P+ Y +L
Sbjct: 122 EAAAVFEDMKSMGFV-PDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSL 180
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
++AY R+ L++EA NQM + DV+TY+ ++ V + E ++++M
Sbjct: 181 ISAYARDGLLEEAMELKNQM-VERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAG 239
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN T N ++ +G G F +M +V ++ C PD+ T NT+L+VF G +
Sbjct: 240 CKPNICTFNALIKMHGNRGKFAEMMKVFEE-IKICCCVPDIVTWNTLLAVFGQNGMDSEV 298
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+++ + G PE T+N LI AY + +D+ ++ + M STYN V+ A
Sbjct: 299 SGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAA 358
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ G + E +M K + T C L++ YAN ++++ I +
Sbjct: 359 LARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPH 418
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
++ K D L+E ER + +K K PD T + M Y + M K
Sbjct: 419 AVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTK 472
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 177/373 (47%), Gaps = 6/373 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQP-ELARKVFNEMVEEGIEPTPEL 181
++ +A+ VF+ ++E+ +P TY +L + GK G P +F M GI P
Sbjct: 48 RYREAVMVFKKMEEEGC-KPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYT 106
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRF-ELIETLYQD 240
Y L+ R SL +EA MK++ PD TY+TL+ + R E IE L ++
Sbjct: 107 YNTLITCCRRGSLYEEAAAVFEDMKSM-GFVPDKVTYNTLLDVYGKSRRIKEAIEVL-RE 164
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M+ +P+ VT N ++ Y + G+ ++ + + M+E K DV+T +LS F G
Sbjct: 165 MEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGI-KLDVFTYTAMLSGFVRTG 223
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+ + R +E+ R G P TFN LI +G + + +M V E ++ T+N
Sbjct: 224 KDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWN 283
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
++ F G + F++M G + T+ LI+ Y+ G F + ++ +
Sbjct: 284 TLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDT 343
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
I ++S YNAV++A + + E++ M++ C+P+ T + AYA ++
Sbjct: 344 GITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRM 403
Query: 481 YALEQEKLQMLLE 493
AL +E ++E
Sbjct: 404 LALAEEICSGVIE 416
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 146/282 (51%), Gaps = 14/282 (4%)
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM-FDQME 270
+PDVY Y++LI ACV R+ +++ M+E P +T N++L YGK GM ++++
Sbjct: 30 EPDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKIT 89
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
+ GM ++A PD +T NT+++ + +E ++ G P+ T+N L+
Sbjct: 90 GLFEGM-KNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDV 148
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSS---TYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
YGK R ++ +E +R+++ S TYN++I A++ G + QM G+
Sbjct: 149 YGKSR---RIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGI 205
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA---ENVSFYNAVISACIKADDLME 444
K D T+ +++G+ G K S++R+ +++ A N+ +NA+I E
Sbjct: 206 KLDVFTYTAMLSGFVRTG---KDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAE 262
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
M +V++ +K C PD T++ + + + GM+ +V + +E
Sbjct: 263 MMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKE 304
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 174/391 (44%), Gaps = 46/391 (11%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A++VFE ++ +P T+ L+ + G G+ KVF E+ P + LL
Sbjct: 228 AMRVFEEMRTAGC-KPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLL 286
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
A + +N + E +MK + P+ TY+TLI A F+ +Y+ M + +
Sbjct: 287 AVFGQNGMDSEVSGVFKEMKRV-GFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGI 345
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM- 305
TP+ T N VL + G+++Q E++L+ M + CKP+ T ++L +AN ++ M
Sbjct: 346 TPDLSTYNAVLAALARGGLWEQSEKILAEM-QDGMCKPNELTHCSLLHAYANGKEIGRML 404
Query: 306 ----------------------------------ERWYEKFRNFGIDPETRTFNILIGAY 331
ER + + + G P+ T N +I Y
Sbjct: 405 ALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIY 464
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
G+++M K + ++ +M++ F + +TYN+++ S + + E +++ A+G+K D
Sbjct: 465 GRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDI 524
Query: 392 KTFCCLINGYANAGLFHK---VISSVRLASKLQIAENVSFYNAVISACIKADDLMEME-R 447
++ +I Y G + + S +R + + +V YN + A AD + E
Sbjct: 525 ISYNTVIFAYCRNGRMKEASHIFSEMRESG---LIPDVITYNTFV-ASYAADSMFEEAID 580
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
V M + C+P+ T++ + + Y K D
Sbjct: 581 VVCYMIKHGCKPNQNTYNSVIDGYCKLNRRD 611
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 4/151 (2%)
Query: 129 QVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAA 188
++ +KE F P TY L+ + +S E + +V E++ +GI+P Y ++ A
Sbjct: 475 EILNFMKESGF-TPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFA 533
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVT 247
YCRN + EA ++M+ PDV TY+T + + D+M E I+ + M +
Sbjct: 534 YCRNGRMKEASHIFSEMRE-SGLIPDVITYNTFVASYAADSMFEEAIDVVCY-MIKHGCK 591
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
PN T N V+ GY K D + +S + E
Sbjct: 592 PNQNTYNSVIDGYCKLNRRDDAIKFISSLHE 622
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 181/361 (50%), Gaps = 9/361 (2%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+A+++F EM+K ++P +Y ++ L K+G +A VF +M + G +P Y+
Sbjct: 181 EAVELFNEMVKRG--HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYST 238
Query: 185 LLAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
++ + C++ L+++A L++M + +P P+V+TY++++ + + L+++M
Sbjct: 239 IIDSLCKDRLVNDAMEFLSEMVERGIP---PNVFTYNSIVHGFCNLGQLNEATRLFKEMV 295
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
R V PNTVT I++ G K GM + V M E +PD+ T N ++ + + +
Sbjct: 296 GRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGV-EPDISTYNALMDGYCLQRLM 354
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ ++ +E G P ++NILI Y K R D+ S++ M + TY+ +
Sbjct: 355 NEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTL 414
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
++ +G K F++M + G + T+ L++G+ G + + ++ + ++
Sbjct: 415 MQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKL 474
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
N+ Y +I A L + ++ ++ RPD T+++M + KEG++D+ Y
Sbjct: 475 EPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYD 534
Query: 483 L 483
L
Sbjct: 535 L 535
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 143/334 (42%), Gaps = 4/334 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY ++ GQ A ++F EMV + P +T L+ C+ ++ EA +
Sbjct: 266 PNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLV 325
Query: 202 LNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
M T +PD+ TY+ L+ C+ + E + +++ M + P + NI++ GY
Sbjct: 326 FETM-TEKGVEPDISTYNALMDGYCLQRLMNE-AKKVFEIMIRKGCAPGAHSYNILINGY 383
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K+ D+ + +L+ M A PD T +T++ G+ +++ ++G P
Sbjct: 384 CKSRRMDEAKSLLAEMYHKAL-NPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPN 442
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+ IL+ + K D+ +++ M++ + Y +IE G + + F
Sbjct: 443 LVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFS 502
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
++ +G + D +T+ +I G GL + R N YN +I ++
Sbjct: 503 KLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQ 562
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
D R+ M K + TF ++ + +++
Sbjct: 563 DSSTAIRLIDEMVGKRFSVNLSTFQMLLDLESQD 596
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 134/326 (41%), Gaps = 37/326 (11%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
L+ L + + + V +M + GI P + AL+ C I EA N+M
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+ +P+V +Y+T+I + +++ M++ PN VT + ++ K + +
Sbjct: 194 H-EPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDA 252
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
LS M+E P+V+T N+I+ F N GQ++ R +++ + P T TF IL+
Sbjct: 253 MEFLSEMVERGI-PPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVD 311
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
K+ M V EA FE M +G++
Sbjct: 312 GLCKEGM-------------------------VSEA----------RLVFETMTEKGVEP 336
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
D T+ L++GY L ++ + + A YN +I+ K+ + E + +
Sbjct: 337 DISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLL 396
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEG 475
M K PD+ T+S + + + G
Sbjct: 397 AEMYHKALNPDTVTYSTLMQGLCQLG 422
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 136/324 (41%), Gaps = 10/324 (3%)
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
F MV P+ + L ++ + NQM L +VY+ + LI
Sbjct: 81 FYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMD-LFRVTHNVYSLNILINCLC 139
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
+ ++ M + + P+ +T N ++ G G + + + M++ +P+V
Sbjct: 140 RLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGH-EPNV 198
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
+ T+++ G M ++K G P T++ +I + K R+ + +
Sbjct: 199 ISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSE 258
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M + P TYN+++ F ++G F++M + +T TF L++G G+
Sbjct: 259 MVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGM 318
Query: 407 FHKVISSVRLA----SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
+S RL ++ + ++S YNA++ + E ++V++ M K C P +
Sbjct: 319 ----VSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAH 374
Query: 463 TFSIMTEAYAKEGMNDKVYALEQE 486
+++I+ Y K D+ +L E
Sbjct: 375 SYNILINGYCKSRRMDEAKSLLAE 398
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 166/350 (47%), Gaps = 3/350 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QAL VF +KE+ +P G Y LL L K + + A ++FNE+ E + P +Y +
Sbjct: 651 QALDVFGRMKEEGM-EPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIM 709
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +++ +DEA ++ MK N PD++TY++L+ + R E ++ M E
Sbjct: 710 VNGLVKSNRVDEACKLVDSMKN-QNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEG 768
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ V ++ GK G + M + C PDV T ++++ +G+V+
Sbjct: 769 HEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKK-RCVPDVVTYSSLIDSLGKEGRVEEA 827
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++E + G P ++ LI ++GKK M D+ + E M++ Q P TYNN++
Sbjct: 828 YYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSG 887
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ G E E+M G D T+ LI+G G+ + S + + I +
Sbjct: 888 LAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPD 947
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
V + ++I + K D L+E ++ M+E+ P T++++ + + G
Sbjct: 948 VITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAG 997
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 144/342 (42%), Gaps = 38/342 (11%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A ++ + +K Q P TY LL LGKSG+ E A +F +M EEG EP YT+L
Sbjct: 721 EACKLVDSMKNQNIL-PDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSL 779
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + + A + M C PDV TYS+LI + R E +++ +
Sbjct: 780 MDVLGKGGKLSHALIIFRAMAK-KRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKG 838
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
TPN + ++ +GK GM D+ + M + C P++ T N +LS A G++++
Sbjct: 839 CTPNVGVYSSLIDSFGKKGMVDRALELFEEM-QRRQCPPNIVTYNNLLSGLAKAGRLNVA 897
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E+ E+ G P+ T+NILI GK M D+ S + M++ T+ ++IE+
Sbjct: 898 EKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIES 957
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ F+ M EG T+ LI+ AG H
Sbjct: 958 LGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVH----------------- 1000
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
E ++ MK K C PD T IM
Sbjct: 1001 ------------------EAAMIFHEMKVKGCMPDGITIGIM 1024
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 162/381 (42%), Gaps = 34/381 (8%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
+ A+ VF L Q QP T+ + +SG+ + A + EM++ GI+P +T
Sbjct: 268 YHSAVIVFGKLG-QFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFT 326
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
L+ A ++ IDEA N MK L C P+V TY+TL+ A R E ++ +M E
Sbjct: 327 VLIDALVKSGNIDEACKFFNGMKNL-RCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKE 385
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+ +P+ + N ++ G GKAG D + M + P++ T N ++SV G+
Sbjct: 386 NNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLV-PNLRTYNIMISVLGKAGRQP 444
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM---------------- 347
+ + + G P+ T+N LI GK DK+ ++++ M
Sbjct: 445 EAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAG 504
Query: 348 ---------RKLQFP------WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
R +++P TYN ++ AF G E M
Sbjct: 505 HEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVV 564
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
T+ L++G AG + +S +R K +V Y++++++ K D E ++ M
Sbjct: 565 TYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEM 624
Query: 453 KEKHCRPDSETFSIMTEAYAK 473
K C D T+S++ K
Sbjct: 625 VRKGCVADVSTYSLVINCLCK 645
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 156/344 (45%), Gaps = 2/344 (0%)
Query: 136 EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI 195
E+ +P TY L+ K Q E + +F+EMV +G Y+ ++ C++ +
Sbjct: 590 EKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDV 649
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI 255
D+A +MK +P + Y TL+ + V + + ++ ++ E S+ P+T NI
Sbjct: 650 DQALDVFGRMKE-EGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNI 708
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
++ G K+ D+ +++ M ++ PD++T ++L G+++ + K
Sbjct: 709 MVNGLVKSNRVDEACKLVDSM-KNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEE 767
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G +P+ + L+ GK + M K + TY+++I++ G +
Sbjct: 768 GHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEA 827
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
Y FE ++G + + LI+ + G+ + + + Q N+ YN ++S
Sbjct: 828 YYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSG 887
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
KA L E++ + M++ C PD T++I+ + K GM D+
Sbjct: 888 LAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDE 931
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 174/426 (40%), Gaps = 67/426 (15%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPT------- 178
+A Q+F LKEQ P TY L+ +LGK GQ + + EMVE+G E
Sbjct: 445 EAWQLFHDLKEQGAV-PDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNA 503
Query: 179 ---------------PEL---------YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
P L Y L++A+ N +DEA L MK C P
Sbjct: 504 GHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKK-HECIPT 562
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGK-------AGMFD 267
V TY+TL+ A R + +L ++M+++ P+ VT + ++ + K +FD
Sbjct: 563 VVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFD 622
Query: 268 QMER------------VLS---------------GMLESATCKPDVWTMNTILSVFANKG 300
+M R V++ G ++ +P + T+LS
Sbjct: 623 EMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDE 682
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
++D + + + + + P+T +NI++ K D+ +++ M+ TY
Sbjct: 683 KIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYT 742
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
++++ G + F +M EG + D + L++ G + R +K
Sbjct: 743 SLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKK 802
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+ +V Y+++I + K + E ++ K C P+ +S + +++ K+GM D+
Sbjct: 803 RCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRA 862
Query: 481 YALEQE 486
L +E
Sbjct: 863 LELFEE 868
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/409 (20%), Positives = 157/409 (38%), Gaps = 41/409 (10%)
Query: 81 IPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFY 140
I G +R + K+LER K K V + V +K A F +Q Y
Sbjct: 123 INGVIRRRKWDAEMGKQLER-LKFKLNPGLVCDVV---VNQKDLHLAKCFFTWAGQQDGY 178
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
GTY ++ L + + + ++ M +EG + L T+LL + + + A
Sbjct: 179 SHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALE 238
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
NQMK+ C P Y+ +++ V + ++ + + + P+ T I + +
Sbjct: 239 IFNQMKSF-GCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSF 297
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
++G D + M++S P V T ++ G +D +++ +N P
Sbjct: 298 NRSGRLDPAAEPIQEMIKSGI-DPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPN 356
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+ L+ K ++ V M++ + YN +I+ G+A F+
Sbjct: 357 VVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFK 416
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M G+ + +T YN +IS KA
Sbjct: 417 EMKDRGLVPNLRT-----------------------------------YNIMISVLGKAG 441
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
E +++ +KE+ PD T++ + + K G DKV A+ +E ++
Sbjct: 442 RQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVE 490
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 165/363 (45%), Gaps = 9/363 (2%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W L +F ++ + QP TY LL G E A VF M E G+ P Y
Sbjct: 160 EWEGLLGLFAQMRHEGI-QPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITY 218
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
AL+ Y + + L +M+ N PDV Y+ LI+A A ++ +++ M
Sbjct: 219 NALVDIYGQADRHEGVGELLREMEQAGNA-PDVVAYNILIEAYGRAGKYRAAAKMFKQMQ 277
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
E TP+ VT + +L YGK G +D++ + + M E T +PDV T NT++ VF G
Sbjct: 278 EAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGT-EPDVNTYNTLIQVFGQGGFF 336
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ + G++P+ T+ L+ + GK ++ + +M + T+ + +
Sbjct: 337 QESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGL 396
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I A+ + Y F M G K D +T+ LI +A GL+ + S+ I
Sbjct: 397 ITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTMIDEGI 456
Query: 423 AENVSFYNAVISACIKA---DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ +VS YN++I A + DD +E R M+E C P+ T+ + Y G+ D+
Sbjct: 457 SADVSTYNSLIEAFGRGGLFDDAIEFSR---DMEEARCSPNRHTYEALMGVYCTAGLFDE 513
Query: 480 VYA 482
A
Sbjct: 514 AKA 516
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 188/423 (44%), Gaps = 39/423 (9%)
Query: 90 PIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMK 149
P ++ K +E + K +N + F + + W +AL++F+ ++ + +P E Y
Sbjct: 21 PRGSIAKTME-GYRNKLTINDFSLIFREFAQRSDWQKALRLFKYMQRHQWCKPNEHVYTI 79
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM---K 206
++ ++G+ G + A ++F +M +E +TAL+ AY RN + + L +M K
Sbjct: 80 MIGIMGREGMLDKASELFEDMPLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKREK 139
Query: 207 TLPN--------------------------------CQPDVYTYSTLIKACVDAMRFELI 234
PN QPD+ TY+TL+ AC E
Sbjct: 140 VTPNLITYNTVINACAKGGLEWEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEA 199
Query: 235 ETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILS 294
+++ M+E V P+++T N ++ YG+A + + +L M E A PDV N ++
Sbjct: 200 GMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVGELLREM-EQAGNAPDVVAYNILIE 258
Query: 295 VFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 354
+ G+ + +++ + G P+ TF+ L+ AYGK YD++ + M++
Sbjct: 259 AYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEP 318
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
+TYN +I+ F G + F + G++ D T+ L+ GL HK +
Sbjct: 319 DVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGL-HKAAKKI 377
Query: 415 -RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
R + + + +I+A A E + MKE C+PD ET++ + A+A
Sbjct: 378 HRHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAG 437
Query: 474 EGM 476
G+
Sbjct: 438 GGL 440
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 134/321 (41%), Gaps = 8/321 (2%)
Query: 81 IPGYRSKRTPIKNLKKKLERKAKAKAWV--NTVAETFSDHVLKKQWFQALQVFEMLKEQP 138
I G + + L +++E+ A V N + E + ++ A ++F+ ++E
Sbjct: 224 IYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGR---AGKYRAAAKMFKQMQEAG 280
Query: 139 FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA 198
P T+ LL GK G + R +F +M E G EP Y L+ + + E+
Sbjct: 281 C-TPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQES 339
Query: 199 FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
+ L +PD+ TY+ L+ +C + + +++ M + VTP T ++
Sbjct: 340 -INLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLIT 398
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
YG A ++ + + M ES CKPD+ T N ++ A G Y + GI
Sbjct: 399 AYGNAALYSEATYAFNSMKESG-CKPDLETYNALIGAHAGGGLYCEAGSAYLTMIDEGIS 457
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
+ T+N LI A+G+ ++D M + + TY ++ + G +
Sbjct: 458 ADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTYEALMGVYCTAGLFDEAKAQ 517
Query: 379 FEQMHAEGMKADTKTFCCLIN 399
F + G ++C L++
Sbjct: 518 FLDLQVGGELPSVDSYCLLLS 538
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 106/237 (44%), Gaps = 2/237 (0%)
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMER 307
PN I++G G+ GM D+ + M + + +V++ +++ + GQ +
Sbjct: 72 PNEHVYTIMIGIMGREGMLDKASELFEDMPLN-DVEWNVYSFTALINAYGRNGQHEASLH 130
Query: 308 WYEKFRNFGIDPETRTFNILIGAYGKKRM-YDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ + + P T+N +I A K + ++ + + MR TYN ++ A
Sbjct: 131 LLARMKREKVTPNLITYNTVINACAKGGLEWEGLLGLFAQMRHEGIQPDIITYNTLLSAC 190
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
S G + F M+ G+ D+ T+ L++ Y A V +R + A +V
Sbjct: 191 SSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVGELLREMEQAGNAPDV 250
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
YN +I A +A +++K+M+E C PD TFS + EAY K G D+V L
Sbjct: 251 VAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLL 307
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 5/172 (2%)
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P + I+IG G++ M DK S + E M W ++ +I A+ G + +
Sbjct: 72 PNEHVYTIMIGIMGREGMLDKASELFEDMPLNDVEWNVYSFTALINAYGRNGQHEASLHL 131
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGL-FHKVISSVRLASKLQIAENVSFYNAVISACI 437
+M E + + T+ +IN A GL + ++ I ++ YN ++SAC
Sbjct: 132 LARMKREKVTPNLITYNTVINACAKGGLEWEGLLGLFAQMRHEGIQPDIITYNTLLSACS 191
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK----EGMNDKVYALEQ 485
+ E V++ M E PDS T++ + + Y + EG+ + + +EQ
Sbjct: 192 SRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVGELLREMEQ 243
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 18/213 (8%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A F +KE +P TY L+ G A + M++EGI Y +L
Sbjct: 408 EATYAFNSMKESGC-KPDLETYNALIGAHAGGGLYCEAGSAYLTMIDEGISADVSTYNSL 466
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A+ R L D+A M+ C P+ +TY L+ A F+ + + D+
Sbjct: 467 IEAFGRGGLFDDAIEFSRDMEE-ARCSPNRHTYEALMGVYCTAGLFDEAKAQFLDLQVGG 525
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN--KGQVD 303
P+ + ++L + +D +VL MLE M +I V KG++D
Sbjct: 526 ELPSVDSYCLLLSVCARRNRWDDASKVLEEMLEP--------NMPSIYGVVGGILKGEMD 577
Query: 304 MMERW------YEKFRNFGIDPETRTFNILIGA 330
W ++ + G+ R +N L+ A
Sbjct: 578 DGTNWQRVEYAFDGLKVDGVGSNLRFYNALLEA 610
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 171/363 (47%), Gaps = 2/363 (0%)
Query: 113 ETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE 172
ET ++ +++W A+ ++E + + ++P G + L+ G++ Q A F+ M +
Sbjct: 70 ETVAEFRRQRKWRSAIVIYEWILQGSMFKPDVGCFNMLMDAYGRTKQWTEAENTFHLMKK 129
Query: 173 EGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE 232
PT + L+AAY R ++ A L++MK NC P + TY+T ++ + ++
Sbjct: 130 FQCLPTETSFNVLMAAYSRGGQLERAERVLHEMKE-SNCSPGLVTYNTYLEVLNKSGSWQ 188
Query: 233 LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTI 292
L E ++++M R V P T +++ YGKA + E + M A C P ++T +
Sbjct: 189 LAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQSM-RKALCPPSLFTYTAL 247
Query: 293 LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF 352
++ A +G E + + ++ G P+ T+N L+ AY + V E M +
Sbjct: 248 INAHAREGNCVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETMLEAGV 307
Query: 353 PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVIS 412
+YN +I+AF G + ++ M G K K+ L++ + AG +
Sbjct: 308 KADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGRVTDAEN 367
Query: 413 SVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
VR + + + +N+++ A + + +ME +Y+ M+ C+PD T + + YA
Sbjct: 368 FVRRLESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQGSVCKPDIITLNTLINVYA 427
Query: 473 KEG 475
+ G
Sbjct: 428 QGG 430
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 125/248 (50%), Gaps = 3/248 (1%)
Query: 100 RKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQ 159
RKA + T + H + +A ++F L+ F P TY LL + G
Sbjct: 233 RKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFV-PDIYTYNALLEAYSRGGH 291
Query: 160 PELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYS 219
P A++VF M+E G++ Y L+ A+ R LI +A + MK + +P + ++
Sbjct: 292 PAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKV-GFKPTMKSHI 350
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
L+ A V A R E + ++ V P+T N +LG YG +G D+ME + M +
Sbjct: 351 LLLSAFVKAGRVTDAENFVRRLESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESM-QG 409
Query: 280 ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
+ CKPD+ T+NT+++V+A G ++ E + + G P+ ++ L+GAY K+++Y K
Sbjct: 410 SVCKPDIITLNTLINVYAQGGYIERAEEIFNSLESKGFTPDVMSWTSLMGAYSKRKLYRK 469
Query: 340 MSSVMEYM 347
SV + M
Sbjct: 470 CVSVYQKM 477
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 130/313 (41%), Gaps = 42/313 (13%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
W A VF ++ + P T+ ++ + GK+ A +F M + P+ YT
Sbjct: 187 WQLAEDVFREMQNRGV-PPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYT 245
Query: 184 ALLAAYCRNS---LIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
AL+ A+ R +E F L + +P D+YTY+ L++A + +++
Sbjct: 246 ALINAHAREGNCVRAEEIFAELQSVGFVP----DIYTYNALLEAYSRGGHPAGAKEVFET 301
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGM-------FDQMERV------------LSGM----- 276
M E V + V+ NI++ +G+AG+ +D M++V LS
Sbjct: 302 MLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGR 361
Query: 277 ----------LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
LES +PD + N++L + N G++D ME YE + P+ T N
Sbjct: 362 VTDAENFVRRLESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQGSVCKPDIITLNT 421
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
LI Y + ++ + + F ++ +++ A+S + +++M G
Sbjct: 422 LINVYAQGGYIERAEEIFNSLESKGFTPDVMSWTSLMGAYSKRKLYRKCVSVYQKMLIAG 481
Query: 387 MKADTKTFCCLIN 399
D T L++
Sbjct: 482 CIPDRATAKVLLS 494
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 168/349 (48%), Gaps = 10/349 (2%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
EM E + P TY L+ K G+ + A ++F+EM + ++PT ++YT LL Y +
Sbjct: 222 EMCNEGDCF-PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFK 280
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
+++A +MK C P VYTY+ LIK A R + Y+DM +TP+ V
Sbjct: 281 VGKVEKALDLFEEMKR-AGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVV 339
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL-SVFANKGQVDMMERWYE 310
N ++ GK G +++ V S M C P V + NT++ ++F +K V + W++
Sbjct: 340 FLNNLMNILGKVGRVEELTNVFSEM-GMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFD 398
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
K + + P T++ILI Y K +K ++E M + FP + Y ++I A +G
Sbjct: 399 KMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINA---LG 455
Query: 371 DAKHMEYT---FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVS 427
AK E F+++ ++ + +I + G + + +V
Sbjct: 456 KAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVY 515
Query: 428 FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
YNA++S +KA + E + ++M+E CR D + +I+ +A+ G+
Sbjct: 516 AYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGV 564
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 144/358 (40%), Gaps = 52/358 (14%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL VF K + +P TY ++++L + GQ E +V+ EM EG
Sbjct: 180 KALSVFYQAKGRKC-KPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG----------- 227
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+C PD TYS LI + R + L+ +M +
Sbjct: 228 ------------------------DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNC 263
Query: 246 VTPNTVTQNIVLGGYGKAG-------MFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
+ P +LG Y K G +F++M+R A C P V+T ++
Sbjct: 264 MQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKR--------AGCSPTVYTYTELIKGLGK 315
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
G+VD +Y+ G+ P+ N L+ GK +++++V M + T +
Sbjct: 316 AGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVS 375
Query: 359 YNNVIEA-FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
YN VI+A F + F++M A+ + T+ LI+GY K + +
Sbjct: 376 YNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEM 435
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + Y ++I+A KA + ++K +KE S +++M + + K G
Sbjct: 436 DEKGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCG 493
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 111/236 (47%), Gaps = 11/236 (4%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYC---RNSLIDEA 198
P E TY L+ K+ + E A + EM E+G P P Y +L+ A R DE
Sbjct: 407 PSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADEL 466
Query: 199 FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
F L + N VY + +IK + L+ +M + P+ N ++
Sbjct: 467 FKELKE--NFGNVSSRVY--AVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMS 522
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
G KAGM ++ +L M E+ C+ D+ + N IL+ FA G +E ++ GI
Sbjct: 523 GMVKAGMINEANSLLRKMEENG-CRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIK 581
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKH 374
P+ T+N L+G + M+++ + +M M+ F + + TY+++++A +G+ H
Sbjct: 582 PDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA---VGNVDH 634
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 155/383 (40%), Gaps = 70/383 (18%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A+++F+ +K+ QP E Y LL + K G+ E A +F EM G PT YT L+
Sbjct: 252 AIRLFDEMKDNCM-QPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELI 310
Query: 187 AAYCRNSLIDEAF---------------VTLNQM----------KTLPN---------CQ 212
+ +DEA+ V LN + + L N C
Sbjct: 311 KGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCT 370
Query: 213 PDVYTYSTLIKACVDA-MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
P V +Y+T+IKA ++ + + + M SV+P+ T +I++ GY K ++
Sbjct: 371 PTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALL 430
Query: 272 VLSGMLE-------SATC----------------------KPDVWTMNT-----ILSVFA 297
+L M E +A C K + +++ ++ F
Sbjct: 431 LLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFG 490
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
G++ + + +N G P+ +N L+ K M ++ +S++ M + +
Sbjct: 491 KCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADIN 550
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
++N ++ F+ G + FE + G+K D T+ L+ +A+AG+F + +R
Sbjct: 551 SHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREM 610
Query: 418 SKLQIAENVSFYNAVISACIKAD 440
+ Y++++ A D
Sbjct: 611 KDKGFEYDAITYSSILDAVGNVD 633
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 123/308 (39%), Gaps = 5/308 (1%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
Y L+ L E + T+ ++ T + P V S L+KA A +++
Sbjct: 129 YMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVL--SELVKALGRAKMVSKALSVFY 186
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
R P + T N V+ + G +++ V + M C PD T + ++S +
Sbjct: 187 QAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKL 246
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G+ D R +++ ++ + P + + L+G Y K +K + E M++ T TY
Sbjct: 247 GRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTY 306
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+I+ G ++ M +G+ D L+N G ++ +
Sbjct: 307 TELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGM 366
Query: 420 LQIAENVSFYNAVISACIKAD-DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ V YN VI A ++ + E+ + +MK P T+SI+ + Y K +
Sbjct: 367 WRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVE 426
Query: 479 KVYALEQE 486
K L +E
Sbjct: 427 KALLLLEE 434
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 168/349 (48%), Gaps = 10/349 (2%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
EM E + P TY L+ K G+ + A ++F+EM + ++PT ++YT LL Y +
Sbjct: 222 EMCNEGDCF-PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFK 280
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
+++A +MK C P VYTY+ LIK A R + Y+DM +TP+ V
Sbjct: 281 VGKVEKALDLFEEMKR-AGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVV 339
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL-SVFANKGQVDMMERWYE 310
N ++ GK G +++ V S M C P V + NT++ ++F +K V + W++
Sbjct: 340 FLNNLMNILGKVGRVEELTNVFSEM-GMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFD 398
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
K + + P T++ILI Y K +K ++E M + FP + Y ++I A +G
Sbjct: 399 KMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINA---LG 455
Query: 371 DAKHMEYT---FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVS 427
AK E F+++ ++ + +I + G + + +V
Sbjct: 456 KAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVY 515
Query: 428 FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
YNA++S +KA + E + ++M+E CR D + +I+ +A+ G+
Sbjct: 516 AYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGV 564
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 143/358 (39%), Gaps = 52/358 (14%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL VF K + +P TY ++++L + GQ E +V+ EM EG
Sbjct: 180 KALSVFYQAKGRKC-KPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG----------- 227
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+C PD TYS LI + R + L+ +M +
Sbjct: 228 ------------------------DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNC 263
Query: 246 VTPNTVTQNIVLGGYGKAG-------MFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
+ P +LG Y K G +F++M+R A C P V+T ++
Sbjct: 264 MQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKR--------AGCSPTVYTYTELIKGLGK 315
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
G+VD +Y+ G+ P+ N L+ GK +++++V M + T +
Sbjct: 316 AGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVS 375
Query: 359 YNNVIEA-FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
YN VI+A F + F++M A+ + T+ LI+GY K + +
Sbjct: 376 YNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEM 435
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + Y ++I+A KA ++K +KE S +++M + + K G
Sbjct: 436 DEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCG 493
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 111/234 (47%), Gaps = 7/234 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E TY L+ K+ + E A + EM E+G P P Y +L+ A + + A
Sbjct: 407 PSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANEL 466
Query: 202 LNQMK-TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
++K N VY + +IK + L+ +M + P+ N ++ G
Sbjct: 467 FKELKENFGNVSSRVY--AVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGM 524
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
KAGM ++ +L M E+ C+ D+ + N IL+ FA G +E ++ GI P+
Sbjct: 525 VKAGMINEANSLLRKMEENG-CRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPD 583
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKH 374
T+N L+G + M+++ + +M M+ F + + TY+++++A +G+ H
Sbjct: 584 GVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA---VGNVDH 634
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 155/383 (40%), Gaps = 70/383 (18%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A+++F+ +K+ QP E Y LL + K G+ E A +F EM G PT YT L+
Sbjct: 252 AIRLFDEMKDNCM-QPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELI 310
Query: 187 AAYCRNSLIDEAF---------------VTLNQM----------KTLPN---------CQ 212
+ +DEA+ V LN + + L N C
Sbjct: 311 KGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCT 370
Query: 213 PDVYTYSTLIKACVDA-MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
P V +Y+T+IKA ++ + + + M SV+P+ T +I++ GY K ++
Sbjct: 371 PTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALL 430
Query: 272 VLSGMLE-------SATC----------------------KPDVWTMNT-----ILSVFA 297
+L M E +A C K + +++ ++ F
Sbjct: 431 LLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFG 490
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
G++ + + +N G P+ +N L+ K M ++ +S++ M + +
Sbjct: 491 KCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADIN 550
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
++N ++ F+ G + FE + G+K D T+ L+ +A+AG+F + +R
Sbjct: 551 SHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREM 610
Query: 418 SKLQIAENVSFYNAVISACIKAD 440
+ Y++++ A D
Sbjct: 611 KDKGFEYDAITYSSILDAVGNVD 633
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 123/308 (39%), Gaps = 5/308 (1%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
Y L+ L E + T+ ++ T + P V S L+KA A +++
Sbjct: 129 YMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVL--SELVKALGRAKMVSKALSVFY 186
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
R P + T N V+ + G +++ V + M C PD T + ++S +
Sbjct: 187 QAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKL 246
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G+ D R +++ ++ + P + + L+G Y K +K + E M++ T TY
Sbjct: 247 GRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTY 306
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+I+ G ++ M +G+ D L+N G ++ +
Sbjct: 307 TELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGM 366
Query: 420 LQIAENVSFYNAVISACIKAD-DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ V YN VI A ++ + E+ + +MK P T+SI+ + Y K +
Sbjct: 367 WRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVE 426
Query: 479 KVYALEQE 486
K L +E
Sbjct: 427 KALLLLEE 434
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 170/349 (48%), Gaps = 10/349 (2%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
EM E + P TY L+ K G+ + A ++F+EM + ++PT ++YT LL Y +
Sbjct: 222 EMCNEGDCF-PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFK 280
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
+++A +MK C P VYTY+ LIK A R E LY++M +TP+ V
Sbjct: 281 VGKVEKALDLFEEMKR-AGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVV 339
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL-SVFANKGQVDMMERWYE 310
N ++ GK G +++ V + M + C P V + NT++ ++F +K V + W++
Sbjct: 340 FLNNLMNILGKVGRLEELTNVFNEM-GTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFD 398
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
K + G+ P T++ILI Y K +K ++E M + FP + Y ++I A +G
Sbjct: 399 KMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINA---LG 455
Query: 371 DAKHMEYT---FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVS 427
AK E F+++ ++ + +I + G + + +V
Sbjct: 456 KAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVY 515
Query: 428 FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
YNA++S +KA + E + ++M+E C D + +I+ +A+ G+
Sbjct: 516 AYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGV 564
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 143/358 (39%), Gaps = 52/358 (14%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL VF K + +P TY ++++L + GQ E +V+ EM EG
Sbjct: 180 KALSVFYQAKGRKC-KPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG----------- 227
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+C PD TYS LI + R + L+ +M +
Sbjct: 228 ------------------------DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNC 263
Query: 246 VTPNTVTQNIVLGGYGKAG-------MFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
+ P +LG Y K G +F++M+R A C P V+T ++
Sbjct: 264 MQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKR--------AGCSPTVYTYTELIKGLGK 315
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
G+V+ Y+ G+ P+ N L+ GK +++++V M + T +
Sbjct: 316 AGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVS 375
Query: 359 YNNVIEA-FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
YN VI+A F + F++M A+G+ T+ LI+GY K + +
Sbjct: 376 YNTVIKALFESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEM 435
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + Y ++I+A KA ++K +KE S +++M + + K G
Sbjct: 436 DEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCG 493
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 110/244 (45%), Gaps = 41/244 (16%)
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKA 224
F++M +G+ P+ Y+ L+ YC+ + +++A + L +M K P C Y +LI A
Sbjct: 397 FDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPA---AYCSLINA 453
Query: 225 CVDAMRFELIETLYQDMDE-----------------------------------RSVTPN 249
A R+E L++++ E + P+
Sbjct: 454 LGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPD 513
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
N ++ G KAGM ++ +L M E+ C D+ + N IL+ FA G +
Sbjct: 514 VYAYNALMSGMVKAGMVNEANSLLRKMEENG-CTADINSHNIILNGFARTGVPRRAIEMF 572
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
E ++ GI P+ T+N L+G + M+++ + +M M+ F + + TY+++++A +M
Sbjct: 573 ETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSSILDAVGNM 632
Query: 370 GDAK 373
K
Sbjct: 633 DHEK 636
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 150/350 (42%), Gaps = 37/350 (10%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +FE +K + P TY +L+ LGK+G+ E A ++ M+ +G+ P L
Sbjct: 286 KALDLFEEMK-RAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNL 344
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMR-FELIETLYQDMDER 244
+ + ++E N+M T C P V +Y+T+IKA ++ + + + M
Sbjct: 345 MNILGKVGRLEELTNVFNEMGTW-RCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKAD 403
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE-------SATC--------------- 282
V+P+ T +I++ GY K ++ +L M E +A C
Sbjct: 404 GVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAA 463
Query: 283 -------KPDVWTMNT-----ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
K + +++ ++ F G++ + + +N G P+ +N L+
Sbjct: 464 NELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSG 523
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
K M ++ +S++ M + +++N ++ F+ G + FE M G+K D
Sbjct: 524 MVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHCGIKPD 583
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
T+ L+ +A+AG+F + +R + Y++++ A D
Sbjct: 584 GVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSSILDAVGNMD 633
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 125/308 (40%), Gaps = 5/308 (1%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
Y AL+ L E + T+ ++ T + P V S L+KA A +++
Sbjct: 129 YMALIRCLEEARLYGEMYRTIQEVVRNTYVSVGPVVL--SELVKALGRAKMVSKALSVFY 186
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
R P + T N V+ + G +++ V + M C PD T + ++S +
Sbjct: 187 QAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKL 246
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G+ D R +++ ++ + P + + L+G Y K +K + E M++ T TY
Sbjct: 247 GRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTY 306
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+I+ G + ++ M +G+ D L+N G ++ +
Sbjct: 307 TELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGT 366
Query: 420 LQIAENVSFYNAVISACIKAD-DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ V YN VI A ++ + E+ + +MK P T+SI+ + Y K +
Sbjct: 367 WRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVE 426
Query: 479 KVYALEQE 486
K L +E
Sbjct: 427 KALLLLEE 434
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 176/373 (47%), Gaps = 8/373 (2%)
Query: 118 HVLKK--QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQ--PELARKVFNEMVEE 173
H L + ++ +AL++F L+ Q P TY +L + G+ G+ P + + +EM
Sbjct: 182 HALSRAGRYERALELFAELRRQGV-APTLVTYNVVLDVYGRMGRSWPRIV-ALLDEMRAA 239
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
G+EP + ++AA CR+ L+DEA +K + P V TY+ L++ A +
Sbjct: 240 GVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGH-APCVVTYNALLQVFGKAGNYTE 298
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
+ +M++ P+ VT N + G Y +AG F++ R L M S P+ +T NT++
Sbjct: 299 ALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTM-ASKGLLPNAFTYNTVM 357
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
+ + N G+VD +++ + G P T+N+++G GKK + M ++ M +
Sbjct: 358 TAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCT 417
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
T+N ++ G ++ E M + G++ T+ LI Y G
Sbjct: 418 PNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKM 477
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ ++ YNA+++ + D + + +M+ K +P+ +++S++ + YAK
Sbjct: 478 YNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAK 537
Query: 474 EGMNDKVYALEQE 486
G + A+E E
Sbjct: 538 GGNVAGIAAIENE 550
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 163/363 (44%), Gaps = 20/363 (5%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ FE LK + + P TY LL + GK+G A +V EM + G +P Y L
Sbjct: 263 EAVAFFEDLKARG-HAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNEL 321
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
Y R +EA L+ M + P+ +TY+T++ A + + + L+ M +
Sbjct: 322 AGTYARAGFFEEAARCLDTMAS-KGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTG 380
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN T N+VLG GK F M +L M S C P+ T NT+L+V +G D +
Sbjct: 381 FVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSG-CTPNRVTWNTMLAVCGKRGMEDYV 439
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKK-------RMYDKMSSVMEYMRKLQFPWTSST 358
R E R+ G++ T+N LI AYG+ +MY++M+S F +T
Sbjct: 440 TRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSA-------GFTPCITT 492
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV--ISSVRL 416
YN ++ S GD + +M +G K + +++ L+ YA G + I +
Sbjct: 493 YNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVY 552
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
S V VI A K L ME ++ +K + PD F+ M YAK GM
Sbjct: 553 GSGAVFPSWVILRTLVI-ANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGM 611
Query: 477 NDK 479
K
Sbjct: 612 YSK 614
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 138/331 (41%), Gaps = 1/331 (0%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL L SG E A + +EG L ++ A R D L++ P
Sbjct: 110 LLKALELSGHWEWALALLRWAGKEGAADASAL-EMVVRALGREGQHDAVCALLDETPLPP 168
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+ DV Y+T++ A A R+E L+ ++ + V P VT N+VL YG+ G
Sbjct: 169 GSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPR 228
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
L + +A +PD +T +T+++ G VD ++E + G P T+N L+
Sbjct: 229 IVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQ 288
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+GK Y + V+ M + + TYN + ++ G + + M ++G+
Sbjct: 289 VFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLP 348
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
+ T+ ++ Y N G + ++ K NV+ YN V+ K M +
Sbjct: 349 NAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEML 408
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
M C P+ T++ M K GM D V
Sbjct: 409 GEMSRSGCTPNRVTWNTMLAVCGKRGMEDYV 439
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 152/357 (42%), Gaps = 23/357 (6%)
Query: 121 KKQWFQALQVFEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPT 178
KK F + EML E + P T+ +L + GK G + +V M G+E +
Sbjct: 397 KKSRFTVM--LEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELS 454
Query: 179 PELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
+ Y L+AAY R AF N+M T P + TY+ L+ + +++
Sbjct: 455 RDTYNTLIAAYGRCGSRTNAFKMYNEM-TSAGFTPCITTYNALLNVLSRQGDWSTAQSIV 513
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
M + PN + +++L Y K G + + + + S P + T++
Sbjct: 514 SKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFK 573
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
++D ME +++ + G +P+ FN ++ Y K MY K + V + +++ T
Sbjct: 574 CRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLIT 633
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMH-AEGMKADTKTFCCLINGYANAGLF---HKVISSV 414
YN++++ ++ ++ E Q+ ++ MK D ++ +ING+ GL +V+S +
Sbjct: 634 YNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEM 693
Query: 415 -------------RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
L E S VI ++ L ME Y+R+ E +CR
Sbjct: 694 VADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQ-HGLKPMELTYRRVVESYCR 749
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 3/155 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEM-VEEGIEPTPELYTA 184
+A +VF+ +K P TY L+ + K + A K+ N++ + ++P Y
Sbjct: 614 KATEVFDSIKRSGL-SPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNT 672
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
++ +C+ L+ EA L++M P TY TL+ F + M +
Sbjct: 673 VINGFCKQGLVKEAQRVLSEM-VADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQH 731
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
+ P +T V+ Y +A F++ LS + E+
Sbjct: 732 GLKPMELTYRRVVESYCRAKRFEEARGFLSEVSET 766
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 178/376 (47%), Gaps = 15/376 (3%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
+ +A Q+F+ +K F +P + T+ LL + GK+ + E A V +M G P+ Y
Sbjct: 272 YREAAQMFDEMKAAGF-EPDKVTFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYN 330
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
+L++AY ++ L++EA L Q +PDV TY+TLI + + Y +M
Sbjct: 331 SLISAYVKDGLLEEAL-ELKQEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVR 389
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+PN T N ++ +G G F +M V L SA PDV T NT+L+VF G
Sbjct: 390 NGCSPNLCTYNALIKMHGVRGKFTEMMIVFDD-LRSAGYVPDVVTWNTLLAVFGQNGLDS 448
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ +++ + G PE T+ LI +Y + ++D+ + + M + STYN V+
Sbjct: 449 EVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVL 508
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
A + G E F +M K D ++ L++ YANA K + ++ S+ A
Sbjct: 509 SALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANA----KKLDKMKALSEDIYA 564
Query: 424 ENVSFYNAVISACI----KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ + +N ++ + K + L E E+ ++ ++ + C D + M Y K M K
Sbjct: 565 QRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKK 624
Query: 480 VYALEQEKLQMLLEAS 495
V +E L ++ E S
Sbjct: 625 V----EEVLTLMKENS 636
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 169/380 (44%), Gaps = 36/380 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI-DEAFV 200
P Y L+ ++G+ A VF MV+ G++P Y +L Y + S+ E V
Sbjct: 183 PDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVV 242
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
++ MK + D YTY+TLI C + ++ +M P+ VT N +L Y
Sbjct: 243 LVDSMKE-DGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVY 301
Query: 261 GKA-------GMFDQMER-----------------VLSGMLESAT----------CKPDV 286
GKA G+ +ME V G+LE A KPDV
Sbjct: 302 GKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDV 361
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
T T++S G++D Y + G P T+N LI +G + + +M V +
Sbjct: 362 VTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDD 421
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
+R + T+N ++ F G + F++M G + T+ LI+ Y+ GL
Sbjct: 422 LRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 481
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
F + + + + I ++S YNAV+SA + ++ E+++ M+++ C+PD ++S
Sbjct: 482 FDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSS 541
Query: 467 MTEAYAKEGMNDKVYALEQE 486
+ AYA DK+ AL ++
Sbjct: 542 LLHAYANAKKLDKMKALSED 561
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 175/361 (48%), Gaps = 9/361 (2%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H ++ ++ + + VF+ L+ Y P T+ LL + G++G VF EM + G P
Sbjct: 406 HGVRGKFTEMMIVFDDLRSAG-YVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIP 464
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
+ Y +L+++Y R L D+A +M PD+ TY+ ++ A R+ E L
Sbjct: 465 ERDTYVSLISSYSRCGLFDQAMEIYKRM-IEAGIYPDISTYNAVLSALARGGRWVQAEKL 523
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
+ +M++R P+ ++ + +L Y A D+M + LS + + +P W + T++ V
Sbjct: 524 FAEMEDRDCKPDELSYSSLLHAYANAKKLDKM-KALSEDIYAQRIEPHNWLVKTLVLVNN 582
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+ E+ +++ R + N ++ YGK +M K+ V+ M++ +++
Sbjct: 583 KVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAA 642
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
TYN+++ +S +GD + E ++ + GM+ D ++ +I Y G ++ + RL
Sbjct: 643 TYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKG---QMKEASRLF 699
Query: 418 SKLQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
S+++ + ++ YN I + + E + + + + C+P+ T++ + E Y +
Sbjct: 700 SEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRH 759
Query: 475 G 475
G
Sbjct: 760 G 760
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 156/355 (43%), Gaps = 16/355 (4%)
Query: 129 QVFEMLKEQPF--YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+ E+ +E F +P TY L+ L + G+ + A ++EMV G P Y AL+
Sbjct: 344 EALELKQEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALI 403
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+ E + + +++ PDV T++TL+ + ++++M +
Sbjct: 404 KMHGVRGKFTEMMIVFDDLRS-AGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGY 462
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P T ++ Y + G+FDQ + M+E A PD+ T N +LS A G+ E
Sbjct: 463 IPERDTYVSLISSYSRCGLFDQAMEIYKRMIE-AGIYPDISTYNAVLSALARGGRWVQAE 521
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME--YMRKLQ-FPWTSSTY---N 360
+ + + + P+ +++ L+ AY + DKM ++ E Y ++++ W T N
Sbjct: 522 KLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVN 581
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
N + + S+ E F+++ D +++ Y + KV + L +
Sbjct: 582 NKVNSLSET------EKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKEN 635
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
I + + YN+++ + D + E + +K RPD +++ + AY ++G
Sbjct: 636 SINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKG 690
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 1/207 (0%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM-YDKMSS 342
PD ++S F+ G+ + + + G+ P T+N+++ Y K + + ++
Sbjct: 183 PDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVV 242
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+++ M++ TYN +I G + F++M A G + D TF L++ Y
Sbjct: 243 LVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYG 302
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
A + I ++ +V YN++ISA +K L E + + M+ + +PD
Sbjct: 303 KARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVV 362
Query: 463 TFSIMTEAYAKEGMNDKVYALEQEKLQ 489
T++ + + G D A E ++
Sbjct: 363 TYTTLISGLDRIGKIDAALATYSEMVR 389
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 2/177 (1%)
Query: 100 RKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQ 159
R+ + +N + S + K + +V ++KE TY L+ + + G
Sbjct: 598 RRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINH-SAATYNSLMHMYSRLGD 656
Query: 160 PELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYS 219
E + E+ G+ P Y ++ AY R + EA ++MK +PD+ TY+
Sbjct: 657 CEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKC-SGVKPDIVTYN 715
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
IK+ V + FE L + + + PN T N +L GY + G + + LS +
Sbjct: 716 IFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRHGRMVEAKSFLSNL 772
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 162/338 (47%), Gaps = 9/338 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ GK G+ + A +F+EM E G+ PT ++YT +L Y + +++A
Sbjct: 228 PDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGL 287
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ +MK C VYTY+ LIK A + E +++ +M + P+ V N ++ G
Sbjct: 288 VQEMKE-KGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLG 346
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTIL-SVFANKGQVDMMERWYEKFRNFGIDPE 320
KAG ++ M ES C P+V T NT++ ++F +K + WYEK + G+ P
Sbjct: 347 KAGRLADAIKLFEEM-ESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPS 405
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT-- 378
+ T++ILI + K +K ++E M + F + Y ++I A +G AK E
Sbjct: 406 SFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINA---LGKAKRYEAANE 462
Query: 379 -FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
F+++ + + + +I G + + KL +V YNA++S +
Sbjct: 463 LFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMV 522
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ E + + M+E C PD + +I+ +A+ G
Sbjct: 523 RVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTG 560
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 144/361 (39%), Gaps = 39/361 (10%)
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
+Q F+ ++ ++ TYM L+ L ++G K EMV P + ++
Sbjct: 108 IQFFKWAGKRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVK 167
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM-DERSV 246
+ ++++A Q+K C+P TY+++I + E + LY +M +E
Sbjct: 168 VLGKAKMVNKALSIFYQIKG-RKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDC 226
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P+TVT + ++ +GK G D + +S+F
Sbjct: 227 LPDTVTYSALIAAFGKLGRDD-----------------------SAISLF---------- 253
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
++ + G+ P + + ++G Y K +K +++ M++ T TY +I+
Sbjct: 254 ---DEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGV 310
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G + F M EG K D LIN AG I LQ NV
Sbjct: 311 GKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNV 370
Query: 427 SFYNAVISACIKAD-DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
YN VI A ++ E Y++MKE P S T+SI+ + + K +K L +
Sbjct: 371 VTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLE 430
Query: 486 E 486
E
Sbjct: 431 E 431
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 120/267 (44%), Gaps = 8/267 (2%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
NTV + + K + +A +E +KE P TY L+ K+ + E A +
Sbjct: 374 NTVIKALFES--KARASEAFLWYEKMKENGVV-PSSFTYSILIDGFCKTNRVEKALLLLE 430
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQ-PDVYTYSTLIKACVD 227
EM E+G P P Y +L+ A + + A +++ NC Y+ +IK
Sbjct: 431 EMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRE--NCGYSSARVYAVMIKHLGK 488
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
R L+ +M + P+ N ++ G + GM D+ +L M E+ C PD+
Sbjct: 489 CGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENG-CTPDLN 547
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
+ N IL+ FA G + + +N I P+ ++N ++G + M+++ + +M+ M
Sbjct: 548 SHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEM 607
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKH 374
F + TY++++EA + D H
Sbjct: 608 NSKGFEYDLITYSSILEAVGKI-DEDH 633
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 177/389 (45%), Gaps = 44/389 (11%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG-IEPTPELYTA 184
+A+ +F +K + QP Y ++++L GQ +++NEM EG P Y+A
Sbjct: 177 KAIAIFYQIKTRKC-QPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSA 235
Query: 185 LLAAYCRNSLIDEAFVTLNQMK---------------TL-------------------PN 210
L++A+C+ D A LN+MK TL
Sbjct: 236 LISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQY 295
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
C+PDV+TY+ LI+ A R + + +M P+TV N ++ GKAG D
Sbjct: 296 CRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAM 355
Query: 271 RVLSGMLESATCKPDVWTMNTIL-SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
++ M + C P V T NTI+ ++F +K + + W+E+ + GI P + T++ILI
Sbjct: 356 KLFQEM-GTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILID 414
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT---FEQMHAEG 386
+ K +K ++E M + FP + Y ++I+A +G AK + F+++
Sbjct: 415 GFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDA---LGKAKRYDLACELFQELKENC 471
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+ + + +I AG I+ +KL A +V YNA++S + L E
Sbjct: 472 GSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEAL 531
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+RM+E C PD +++I+ AK G
Sbjct: 532 STMRRMQEHGCIPDINSYNIILNGLAKTG 560
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 167/381 (43%), Gaps = 38/381 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ K G+ + A ++ NEM E G++PT ++YT L+ + + + A
Sbjct: 228 PDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSL 287
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+M+ C+PDV+TY+ LI+ A R + + +M P+TV N ++ G
Sbjct: 288 FEEMRH-QYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLG 346
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTIL-SVFANKGQVDMMERWYEKFRNFGIDPE 320
KAG D ++ M + C P V T NTI+ ++F +K + + W+E+ + GI P
Sbjct: 347 KAGRLDDAMKLFQEM-GTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPS 405
Query: 321 TRTFNILIGAY-----------------------------------GKKRMYDKMSSVME 345
+ T++ILI + GK + YD + +
Sbjct: 406 SFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQ 465
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
+++ ++ Y +I+ G F++M+ G D + L++G A G
Sbjct: 466 ELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTG 525
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ + +S++R + +++ YN +++ K + MK+ RPD +++
Sbjct: 526 MLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYN 585
Query: 466 IMTEAYAKEGMNDKVYALEQE 486
+ A + GM ++ L +E
Sbjct: 586 TVLGALSHAGMFEEAAKLMEE 606
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 152/348 (43%), Gaps = 4/348 (1%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL +FE ++ Q + +P TY +L+ LGK+G+ + A F EM EG P + ++
Sbjct: 284 ALSLFEEMRHQ-YCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMI 342
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM-RFELIETLYQDMDERS 245
+ +D+A +M TL C P V TY+T+IKA ++ R + + ++ M E
Sbjct: 343 NFLGKAGRLDDAMKLFQEMGTL-RCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESG 401
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
++P++ T +I++ G+ K ++ +L M E P +++ + D+
Sbjct: 402 ISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGF-PPCPAAYCSLIDALGKAKRYDLA 460
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+++ + R + ++I GK D ++ + M KL YN ++
Sbjct: 461 CELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSG 520
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ G T +M G D ++ ++NG A G H+ + + + + +
Sbjct: 521 LARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPD 580
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
V YN V+ A A E ++ + M D T+S + EA K
Sbjct: 581 VVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGK 628
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 135/361 (37%), Gaps = 38/361 (10%)
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI-EPTPELYTALL 186
+Q F ++ Y+ TYM L+ L Q K+ EMV I TP + ++
Sbjct: 107 MQFFRWAAKRRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVV 166
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
++ +A Q+KT CQP Y+++I + ++ + LY +M
Sbjct: 167 RMLGNAKMVSKAIAIFYQIKT-RKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMST--- 222
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
C PD T + ++S F G+ D
Sbjct: 223 --------------------------------EGHCFPDTMTYSALISAFCKLGRRDSAT 250
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ + + G+ P T+ + +LI + K S+ E MR TY +I
Sbjct: 251 QLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRGL 310
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G + F +M EG + DT +IN AG + + L+ +V
Sbjct: 311 GKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSV 370
Query: 427 SFYNAVISACIKADDLM-EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
YN +I A ++ E+ ++RMKE P S T+SI+ + + K +K L +
Sbjct: 371 VTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLE 430
Query: 486 E 486
E
Sbjct: 431 E 431
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 171/370 (46%), Gaps = 7/370 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A + F LK + Y+P TY LL + GK+G A V +EM E P Y +
Sbjct: 311 EAREFFSGLKSEG-YKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEV 369
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+AAY R +E V ++ M + P+ TY+T+I A + ++ M E
Sbjct: 370 VAAYVRAGFHEEGAVVIDAMAS-KGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELG 428
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN T N VLG GK + ++M ++L G ++ C P+ T NT+L++ KG +
Sbjct: 429 CVPNVATYNAVLGMLGKKSLSEEMMKIL-GHMKLNGCSPNHITWNTMLAMCGKKGMHKYV 487
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ + + +N G +P+ TFN LI AYG+ + + + E M K F +TYN ++ A
Sbjct: 488 NQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNA 547
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ GD K E M +G + ++ +++ YA G + + I +
Sbjct: 548 LARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPS 607
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
++ A K L MER ++ +++ +PD + M +AK M D+ +
Sbjct: 608 WMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAH---- 663
Query: 486 EKLQMLLEAS 495
E L+++ +A
Sbjct: 664 EMLRLIHDAG 673
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 133/274 (48%), Gaps = 2/274 (0%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM-FDQMERV 272
DV Y+T++ A ++ +++ M+E ++P+ VT N++L YGK G +D++ +
Sbjct: 221 DVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILEL 280
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
L M S D +T +T+LS +G +D ++ ++ G P T T+N L+ +G
Sbjct: 281 LDEM-RSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFG 339
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K ++ + SV+ M + P + TYN V+ A+ G + + M ++G+ +
Sbjct: 340 KAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAV 399
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
T+ +IN Y G K + +L NV+ YNAV+ K EM ++ M
Sbjct: 400 TYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHM 459
Query: 453 KEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
K C P+ T++ M K+GM+ V + +E
Sbjct: 460 KLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFRE 493
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 146/337 (43%), Gaps = 12/337 (3%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ +L + GK G + +VF EM G EP + + L++AY R ++A
Sbjct: 466 PNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDA-AK 524
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+++ P + TY+ L+ A ++ E++ DM + P+ + ++++ Y
Sbjct: 525 MHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYA 584
Query: 262 KAGMFDQMERVLSGMLESATCKPDV---WTM--NTILSVFANKGQVDMMERWYEKFRNFG 316
K G +E M+E + D+ W + +L+ F + + MER ++ + G
Sbjct: 585 KGGNVKGIE-----MIEKSIYDGDIFPSWMLLRTLVLANFKCR-SLTGMERAFQALQKHG 638
Query: 317 IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME 376
P+ N ++ + K MYD+ ++ + T+N++++ ++ GD E
Sbjct: 639 YKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAE 698
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
+ G K D ++ +I G+ GL + I + + + + + YN IS
Sbjct: 699 EVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGY 758
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
E+ V M +CRP+ T+ I+ + Y K
Sbjct: 759 AAQGMFTEINDVISYMIVHNCRPNELTYKIVADGYCK 795
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 1/207 (0%)
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK-KRMYDKMSSV 343
DV TIL ++ G+ +E+ G+ P T+N+++ YGK R +DK+ +
Sbjct: 221 DVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILEL 280
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
++ MR + T + V+ A G F + +EG K T T+ L++ +
Sbjct: 281 LDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGK 340
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
AG+F + +S + + + YN V++A ++A E V M K P++ T
Sbjct: 341 AGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVT 400
Query: 464 FSIMTEAYAKEGMNDKVYALEQEKLQM 490
++ + AY + G DK + + +++
Sbjct: 401 YTTIINAYGRVGDIDKALEMFDQMMEL 427
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 11/180 (6%)
Query: 125 FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
FQALQ + Y+P +L + K+ + A ++ + + G++P + +
Sbjct: 631 FQALQ-------KHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNS 683
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDE 243
L+ Y R +A L ++T +PD+ +Y+T+IK C + E I L +M
Sbjct: 684 LMDMYARGGDCWKAEEVLRMLQT-SGGKPDLVSYNTVIKGFCRKGLMQEGIRIL-SEMTS 741
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
V P T N + GY GMF ++ V+S M+ C+P+ T + + + D
Sbjct: 742 IGVGPCIFTYNTFISGYAAQGMFTEINDVISYMI-VHNCRPNELTYKIVADGYCKARRYD 800
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 162/338 (47%), Gaps = 9/338 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ GK G+ + A +F+EM E G+ PT ++YT +L Y + +++A
Sbjct: 228 PDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGL 287
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ +MK C VYTY+ LIK A + E +++ +M + P+ V N ++ G
Sbjct: 288 VQEMKE-KGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLG 346
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTIL-SVFANKGQVDMMERWYEKFRNFGIDPE 320
KAG ++ M ES C P+V T NT++ ++F +K + WYEK + G+ P
Sbjct: 347 KAGRLADAIKLFEEM-ESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPS 405
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT-- 378
+ T++ILI + K +K ++E M + F + Y ++I A +G AK E
Sbjct: 406 SFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINA---LGKAKRYEAANE 462
Query: 379 -FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
F+++ + + + +I G + + KL +V YNA++S +
Sbjct: 463 LFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMV 522
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ E + + M+E C PD + +I+ +A+ G
Sbjct: 523 RVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTG 560
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 144/361 (39%), Gaps = 39/361 (10%)
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
+Q F+ ++ ++ TYM L+ L ++G K EMV P + ++
Sbjct: 108 IQFFKWAGKRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVK 167
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM-DERSV 246
+ ++++A Q+K C+P TY+++I + E + LY +M +E
Sbjct: 168 VLGKAKMVNKALSIFYQIKG-RKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDC 226
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P+TVT + ++ +GK G D + +S+F
Sbjct: 227 LPDTVTYSALIAAFGKLGRDD-----------------------SAISLF---------- 253
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
++ + G+ P + + ++G Y K +K +++ M++ T TY +I+
Sbjct: 254 ---DEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGV 310
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G + F M EG K D LIN AG I LQ NV
Sbjct: 311 GKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNV 370
Query: 427 SFYNAVISACIKAD-DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
YN VI A ++ E Y++MKE P S T+SI+ + + K +K L +
Sbjct: 371 VTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLE 430
Query: 486 E 486
E
Sbjct: 431 E 431
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 124/281 (44%), Gaps = 8/281 (2%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
NTV + + K + +A +E +KE P TY L+ K+ + E A +
Sbjct: 374 NTVIKALFES--KARASEAFLWYEKMKENGVV-PSSFTYSILIDGFCKTNRVEKALLLLE 430
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQ-PDVYTYSTLIKACVD 227
EM E+G P P Y +L+ A + + A +++ NC Y+ +IK
Sbjct: 431 EMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRE--NCGYSSARVYAVMIKHLGK 488
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
R L+ +M + P+ N ++ G + GM D+ +L M E+ C PD+
Sbjct: 489 CGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENG-CTPDLN 547
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
+ N IL+ FA G + + +N I P+ ++N ++G + M+++ + +M+ M
Sbjct: 548 SHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEM 607
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
F + TY++++EA + D H MH +K
Sbjct: 608 NSKGFEYDLITYSSILEAVGKI-DEDHTPAGQTVMHIVNIK 647
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 177/364 (48%), Gaps = 5/364 (1%)
Query: 121 KKQWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
K + A+++F EM+K Y+P TY ++ L K G +A ++ +M E+G +P
Sbjct: 60 KAKIIDAVKLFDEMVKMG--YEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNV 117
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+Y+ ++ + C++ LI EA L++M P+V TYS+++ + R +L++
Sbjct: 118 VVYSTIIDSLCKDKLITEAMEFLSEMVN-RGISPNVVTYSSILHGFCNLGRSNEATSLFK 176
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
M ER+V P+TVT NI++ G K GM + + V M+E +P+V T N ++ + ++
Sbjct: 177 QMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGV-EPNVNTYNALMDGYCSQ 235
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
Q+D ++ + G P R++NILI + K D+ ++ M + TY
Sbjct: 236 SQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTY 295
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+ +++ F G + + E+M + G+ D T+ +++G G + ++ +
Sbjct: 296 STLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQE 355
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+I N+ Y +I L ++ + K +PD T+++M K G++++
Sbjct: 356 SKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNE 415
Query: 480 VYAL 483
L
Sbjct: 416 ACEL 419
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 189/439 (43%), Gaps = 16/439 (3%)
Query: 46 VTSTNKHTSFSSESAVAAKKRLWKE----GEYPGVS--ETSIPGY---RSKRTPIKNLKK 96
VT + SS++ + +L+ E G P V T I G S I+ LKK
Sbjct: 48 VTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKK 107
Query: 97 KLERKAKAKAWV-NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLG 155
E+ K V +T+ ++ L + + L EM+ P TY +L
Sbjct: 108 MEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLS--EMVNRG--ISPNVVTYSSILHGFC 163
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
G+ A +F +MVE + P + L+ + +I EA M +P+V
Sbjct: 164 NLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIE-KGVEPNV 222
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
TY+ L+ + + + L+ M + P+ + NI++ G+ K+G D+ + +L+
Sbjct: 223 NTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAE 282
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
M A PD T +T++ F G+ ++ E+ R++G+ P+ T++I++ K+
Sbjct: 283 MSHKAL-TPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQG 341
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
D+ +++ M++ + Y +I+ + G + F + +G++ D T+
Sbjct: 342 HLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYT 401
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
+I+G GL ++ R + N YN +I ++ D R+ + M +
Sbjct: 402 VMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGR 461
Query: 456 HCRPDSETFSIMTEAYAKE 474
DS TF ++++ +++
Sbjct: 462 GFSADSSTFQMLSDLESRD 480
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 126/282 (44%), Gaps = 5/282 (1%)
Query: 208 LPNCQPDVYTYSTLIKACVDAM--RFELIETLYQDMDERSVTPNTVTQNIVLGGY-GKAG 264
L N +PDVYT + LI + F ++ +M + + PN VT + +L G KA
Sbjct: 3 LSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAK 62
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
+ D + ++ M++ +PDV T +TI++ G M + +K G P +
Sbjct: 63 IIDAV-KLFDEMVKMGY-EPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVY 120
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
+ +I + K ++ + + M TY++++ F ++G + F+QM
Sbjct: 121 STIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE 180
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
+ DT TF L++G + G+ + + + NV+ YNA++ + E
Sbjct: 181 RNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDE 240
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
++++ M K C P +++I+ + + K G D+ L E
Sbjct: 241 AQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAE 282
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 132/301 (43%), Gaps = 6/301 (1%)
Query: 179 PELYT--ALLAAYCRNSL--IDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELI 234
P++YT L+ +C ++ AF L M L QP+ T+STL+ +
Sbjct: 8 PDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKL-GLQPNHVTFSTLLNGLSSKAKIIDA 66
Query: 235 ETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILS 294
L+ +M + P+ +T + ++ G K G ++L M E CKP+V +TI+
Sbjct: 67 VKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKM-EEKGCKPNVVVYSTIID 125
Query: 295 VFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 354
+ + + N GI P T++ ++ + ++ +S+ + M +
Sbjct: 126 SLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMP 185
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
+ T+N +++ S G + FE M +G++ + T+ L++GY + +
Sbjct: 186 DTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLF 245
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
+ + A +V YN +I K+ + E + + M K PD+ T+S + + + ++
Sbjct: 246 NIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQD 305
Query: 475 G 475
G
Sbjct: 306 G 306
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 177/375 (47%), Gaps = 3/375 (0%)
Query: 103 KAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPEL 162
K K +N A F + + W ++L++F+ ++ Q + +P E Y ++ +LG+ G E
Sbjct: 105 KNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGVLGREGLLEK 164
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
+++F+EM G+ P+ +TAL+ AY RN + L++MK P + TY+T+I
Sbjct: 165 CQEIFDEMPSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRMKK-ERVSPSILTYNTVI 223
Query: 223 KACV-DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
+C + +E + L+ M + + VT N +L + G+ D+ E V M E
Sbjct: 224 NSCARGGLDWEELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGI 283
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
PD+ T + ++ F +++ + ++ + G P+ ++N+L+ A+ + +
Sbjct: 284 L-PDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAM 342
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
V M+ ++TY+ ++ + G + F +M + + T+ LIN +
Sbjct: 343 GVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVF 402
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
G F +V++ + + N+ Y +I AC K + +++ M EK P S
Sbjct: 403 GEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSS 462
Query: 462 ETFSIMTEAYAKEGM 476
+ ++ + EAY + +
Sbjct: 463 KAYTGVIEAYGQAAL 477
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 173/393 (44%), Gaps = 7/393 (1%)
Query: 84 YRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPK 143
Y+S + +KK ER + + NTV + + L W + L +F ++ + Q
Sbjct: 197 YKSSLELLDRMKK--ERVSPSILTYNTVINSCARGGL--DWEELLGLFAQMRHEGI-QAD 251
Query: 144 EGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLN 203
TY LL + G + A VF M E GI P Y+ L+ + + + +++ L
Sbjct: 252 IVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLK 311
Query: 204 QMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKA 263
+M++ PD+ +Y+ L++A + + +++ M PN T +I+L YG+
Sbjct: 312 EMES-GGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRH 370
Query: 264 GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
G +D + + M S T +P+ T N +++VF G + + ++P T
Sbjct: 371 GRYDDVRDLFLEMKVSNT-EPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMET 429
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
+ LI A GK +++ ++ +M + +S Y VIEA+ + F M+
Sbjct: 430 YEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMN 489
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
G K +T+ LI +A GL+ + + + + +A N +N VI A +
Sbjct: 490 EVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFE 549
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
E + Y M++ C PD +T + Y G+
Sbjct: 550 EAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGL 582
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 123/259 (47%), Gaps = 3/259 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ GK G E A+K+ M E+G+ P+ + YT ++ AY + +L +EA V
Sbjct: 424 EPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALV 483
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
N M + +P V TY++LI+ ++ E + M + V N T N V+ +
Sbjct: 484 AFNTMNEV-GSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAF 542
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ G F++ + M E A C PD T+ +LSV+ G V+ E + + + GI P
Sbjct: 543 RQGGQFEEAIKAYVEM-EKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPS 601
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA-FSDMGDAKHMEYTF 379
+ +++ Y K +D +++ M + +I + D + + +EY F
Sbjct: 602 VMCYCMMLAVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDSNWQMVEYVF 661
Query: 380 EQMHAEGMKADTKTFCCLI 398
E++ +EG + + L+
Sbjct: 662 EKLKSEGCSLGVRFYNTLL 680
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 152/361 (42%), Gaps = 3/361 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A VF + E P TY L+ GK + E ++ EM G P Y L
Sbjct: 270 EAEMVFRTMNEGGIL-PDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVL 328
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L A+ ++ I EA QM+ C P+ TYS L+ R++ + L+ +M +
Sbjct: 329 LEAHAQSGSIKEAMGVFRQMQG-AGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSN 387
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN T NI++ +G+ G F ++ + M+E +P++ T ++ G +
Sbjct: 388 TEPNAATYNILINVFGEGGYFKEVVTLFHDMVEE-NVEPNMETYEGLIFACGKGGLHEDA 446
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++ G+ P ++ + +I AYG+ +Y++ M ++ T TYN++I+
Sbjct: 447 KKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQM 506
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
F+ G K E +M G+ + TF +I + G F + I + K + +
Sbjct: 507 FAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPD 566
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
AV+S A + E E + +K P + +M YAK D + L
Sbjct: 567 EQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLD 626
Query: 486 E 486
E
Sbjct: 627 E 627
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/275 (18%), Positives = 122/275 (44%), Gaps = 4/275 (1%)
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
C+P+ + Y+ +I E + ++ +M V P+ + ++ YG+ G +
Sbjct: 142 CKPNEHIYTIMIGVLGREGLLEKCQEIFDEMPSHGVAPSVFSFTALINAYGRNGQYKSSL 201
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME--RWYEKFRNFGIDPETRTFNILI 328
+L M + P + T NT+++ A +G +D E + + R+ GI + T+N L+
Sbjct: 202 ELLDRM-KKERVSPSILTYNTVINSCA-RGGLDWEELLGLFAQMRHEGIQADIVTYNTLL 259
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
A ++ + D+ V M + +TY+ ++E F + + + ++M + G
Sbjct: 260 SACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSF 319
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
D ++ L+ +A +G + + R N + Y+ +++ + ++ +
Sbjct: 320 PDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDL 379
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ MK + P++ T++I+ + + G +V L
Sbjct: 380 FLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTL 414
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 3/194 (1%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
T+ ++ + GQ E A K + EM + +P + A+L+ YC L++E+ ++
Sbjct: 534 TFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEI 593
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM-DERSVTPNTVTQNIVLGGYGKAG 264
K L P V Y ++ A R++ L +M R + V ++ G Y
Sbjct: 594 KAL-GILPSVMCYCMMLAVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDS 652
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
+ +E V L+S C V NT+L GQ + R + G+ PE
Sbjct: 653 NWQMVEYVFE-KLKSEGCSLGVRFYNTLLEALWWLGQKERATRVLNEATKRGLFPELFRK 711
Query: 325 NILIGAYGKKRMYD 338
N L+ + RM++
Sbjct: 712 NKLVWSVDVHRMWE 725
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 174/355 (49%), Gaps = 4/355 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI-EPTPELYTA 184
A+ +F+ L + +P E Y ++ L K G + A + ++E+GI +P +Y
Sbjct: 160 DAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLL-RLMEQGITKPDTCIYNI 218
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
++ A+C++ ++D A LN+MK N PD+ TY++LI ++E + TL+ +M
Sbjct: 219 VIDAFCKDGMLDGATSLLNEMKQ-KNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHL 277
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
++ P+ T N V+ G K G + E +++ M+E +P+ T N ++ + +GQ+
Sbjct: 278 NIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGV-EPNEITYNVVMDGYCLRGQMGR 336
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
R ++ + GI+P+ ++ LI Y +K+ DK + + + + T + ++
Sbjct: 337 ARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLR 396
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
++G + + F++M A G + T C L+ GY GL + +S + +
Sbjct: 397 GLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDT 456
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
N+ Y AVI+ K L + ++++ PD T++ M Y +EG+ D+
Sbjct: 457 NIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDE 511
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 132/336 (39%), Gaps = 7/336 (2%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A +F +MV P+ ++ LL A ++ L D + ST++
Sbjct: 56 AFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKL-RIPVDAFALSTVV 114
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
+C R +L ++ ++ + N VT ++ G + ++ C
Sbjct: 115 NSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENIC 174
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNF--GI-DPETRTFNILIGAYGKKRMYDK 339
+PD T++ KG ++ ++ R GI P+T +NI+I A+ K M D
Sbjct: 175 EPDEVMYGTVMDGLCKKGHT---QKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDG 231
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+S++ M++ P TY ++I+ + + + F +M + D TF +I+
Sbjct: 232 ATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVID 291
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
G G + + + N YN V+ + R++ M +K P
Sbjct: 292 GLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEP 351
Query: 460 DSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
D +++ + Y ++ DK L +E Q L+ S
Sbjct: 352 DIISYTALINGYVEKKKMDKAMQLFREISQNGLKPS 387
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 165/362 (45%), Gaps = 17/362 (4%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ FE LK + + P TY LL + GK+G A +V EM ++G +P Y L
Sbjct: 262 EAVAFFEDLKARG-HTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNEL 320
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
Y R +EA L+ M T P+ +TY+T++ A + + + L+ M +
Sbjct: 321 AGTYARAGFYEEAAKCLDTM-TSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSG 379
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN T N +LG GK F M +L M S C P+ T NT+L+V +G D +
Sbjct: 380 CVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSG-CTPNRVTWNTMLAVCGKRGMEDYV 438
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKK-------RMYDKMSSVMEYMRKLQFPWTSST 358
R E ++ G++ T+N LI AYG+ +MY++M+S F +T
Sbjct: 439 TRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSA-------GFAPCLTT 491
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN ++ S GD + +M +G K + +++ L+ YA G + + +
Sbjct: 492 YNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVY 551
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ + ++ A K L +E+ ++ +K + PD F+ M YAK GM
Sbjct: 552 GGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYS 611
Query: 479 KV 480
KV
Sbjct: 612 KV 613
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 178/373 (47%), Gaps = 8/373 (2%)
Query: 118 HVLKK--QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQ--PELARKVFNEMVEE 173
H L + ++ +A+++F L+ Q P TY +L + G+ G+ P + + +EM
Sbjct: 181 HALSRAGRYERAVELFAELRRQGV-APTLVTYNVVLDVYGRMGRSWPRIV-ALLDEMRAA 238
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
G+EP + ++AA CR+ L+DEA +K + P V TY+ L++ A +
Sbjct: 239 GVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGH-TPCVVTYNALLQVFGKAGNYTE 297
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
+ ++M++ P+ VT N + G Y +AG +++ + L M S P+ +T NT++
Sbjct: 298 ALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTM-TSKGLLPNAFTYNTVM 356
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
+ + N G+VD +++ + G P T+N ++G GKK + M ++ M +
Sbjct: 357 TAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCT 416
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
T+N ++ G ++ E M + G++ T+ LI Y G
Sbjct: 417 PNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKM 476
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ A ++ YNA+++ + D + + +M+ K +P+ +++S++ + YAK
Sbjct: 477 YNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAK 536
Query: 474 EGMNDKVYALEQE 486
G + A+E+E
Sbjct: 537 GGNIAGIDAIEKE 549
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 139/331 (41%), Gaps = 1/331 (0%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL L SG E A + EG L ++ A R D L++M P
Sbjct: 109 LLKALELSGHWEWALALLRWAGAEGAADASAL-EMVVRALGREGQHDAVCALLDEMPLPP 167
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+ DV Y+T++ A A R+E L+ ++ + V P VT N+VL YG+ G
Sbjct: 168 GSRLDVRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPR 227
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
L + +A +PD +T +T+++ G VD ++E + G P T+N L+
Sbjct: 228 IVALLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQ 287
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+GK Y + V++ M + + TYN + ++ G + + M ++G+
Sbjct: 288 VFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLP 347
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
+ T+ ++ Y N G + ++ K NV+ YN ++ K M +
Sbjct: 348 NAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEML 407
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
M C P+ T++ M K GM D V
Sbjct: 408 GEMSRSGCTPNRVTWNTMLAVCGKRGMEDYV 438
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 147/374 (39%), Gaps = 59/374 (15%)
Query: 121 KKQWFQALQVFEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPT 178
KK F + EML E + P T+ +L + GK G + +V M G+E +
Sbjct: 396 KKSRFTVM--LEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELS 453
Query: 179 PELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
+ Y L+AAY R AF N+M T P + TY+ L+ + +++
Sbjct: 454 RDTYNTLIAAYGRCGSRTNAFKMYNEM-TSAGFAPCLTTYNALLNVLSRQGDWSTAQSIV 512
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAG---MFDQMERVLSG-------------MLESATC 282
M + PN + +++L Y K G D +E+ + G ++ + C
Sbjct: 513 SKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLVIANFKC 572
Query: 283 K------------------PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
+ PD+ N++LS++A G + ++ + G+ P+ T+
Sbjct: 573 RRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITY 632
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
N L+ Y K + ++ ++ Q +YN VI F G K + +M A
Sbjct: 633 NSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIA 692
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
+GM T+ L+ GYA+ +F S R I N L
Sbjct: 693 DGMAPCVVTYHTLVGGYASLEMF----SEAREVINYMIQHN----------------LKP 732
Query: 445 MERVYKRMKEKHCR 458
ME Y+R+ + +C+
Sbjct: 733 MELTYRRVVDSYCK 746
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 170/373 (45%), Gaps = 5/373 (1%)
Query: 119 VLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPT 178
V ++ W +AL+++E L + +Y P +L +LGK+ Q LA ++F E + T
Sbjct: 190 VGQQNWQRALELYECLNLRHWYAPNARMVATILGVLGKANQEALAVEIFAR-AESSVGDT 248
Query: 179 PELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD--AMRFELIET 236
++Y A++ Y RN + L+ M+ C PD+ +++TLI A + AM L
Sbjct: 249 VQVYNAMMGVYARNGRFSKVKELLDLMRE-RGCVPDLVSFNTLINARMKSGAMEPNLALQ 307
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
L ++ + P+ +T N ++ + ++ V S M ES C+PD+WT N ++SV+
Sbjct: 308 LLNEVRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDM-ESHRCQPDLWTYNAMISVY 366
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
+ E +++ + G P+ T+N L+ A+ ++ +K+ + E M K F
Sbjct: 367 GRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDE 426
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
TYN +I + G + M + G D T+ LI+ A + + +
Sbjct: 427 MTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSE 486
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ + Y+A+I A KA E E + M+ +PD +S+M + + +
Sbjct: 487 MLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNE 546
Query: 477 NDKVYALEQEKLQ 489
K L E ++
Sbjct: 547 MKKAMGLYHEMIR 559
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 142/319 (44%), Gaps = 2/319 (0%)
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
SG E AR +FN M+ +G PT + LL A + ++E +V + +++ + +
Sbjct: 822 SGCYERARAIFNTMMRDGPSPTVDSVNGLLQALIVDRRLNELYVVIQELQDM-GLKISKS 880
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
+ ++A A ++ +Y M P I+L K +E +L M
Sbjct: 881 SILLTLEAFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEM 940
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
E A +PD+ N+IL ++ M Y+K ++ + P+ T+N LI Y + R
Sbjct: 941 -EEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRR 999
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
++ S+M MR L TY ++I AF+ + E FE++ + G K D +
Sbjct: 1000 PEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHL 1059
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
++ Y +G K + + + + I +S + ++ + K+ E E V K ++
Sbjct: 1060 MMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTG 1119
Query: 457 CRPDSETFSIMTEAYAKEG 475
D+ +S + +AY K+G
Sbjct: 1120 VVLDTLPYSSVIDAYLKKG 1138
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 124/297 (41%), Gaps = 39/297 (13%)
Query: 156 KSG--QPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
KSG +P LA ++ NE+ GI P Y L++A R S ++EA + M++ CQP
Sbjct: 296 KSGAMEPNLALQLLNEVRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMES-HRCQP 354
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
D++TY+ +I R E L+++++ + P+ VT N +L + + G +++ +
Sbjct: 355 DLWTYNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDIC 414
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI----- 328
M++ + D T NTI+ ++ +G+ D + Y ++ G +P+ T+ +LI
Sbjct: 415 EEMVKRGFGQ-DEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGK 473
Query: 329 ------------------------------GAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
AY K ++ MR+
Sbjct: 474 ASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLA 533
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
Y+ +++ F + K + +M EG D + +++ ++ V +R
Sbjct: 534 YSVMLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLYEVMMHALVRENMWDVVDRIIR 590
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 102/235 (43%), Gaps = 37/235 (15%)
Query: 166 VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC 225
++ ++ + ++P E Y L+ YCR+ +E F +N+M++L +P + TY +LI A
Sbjct: 971 IYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSL-GLEPKLDTYRSLITAF 1029
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
+E E L++++ + ++++ Y +G + E +L+ M ES
Sbjct: 1030 NKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKES------ 1083
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
GI+P T ++L+ +YGK ++ +V++
Sbjct: 1084 ------------------------------GIEPTISTMHLLMVSYGKSGQPEEAENVLK 1113
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+R + Y++VI+A+ GD K +M G++ D + + C I
Sbjct: 1114 NLRTTGVVLDTLPYSSVIDAYLKKGDFKAGIEKLTEMKEAGIEPDHRIWTCFIRA 1168
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/334 (16%), Positives = 130/334 (38%), Gaps = 37/334 (11%)
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
++A ++F++M G+E + LY +++ YCR L + A
Sbjct: 719 DVASQIFSDMRFNGVESSECLYQGMVSVYCRMDLPETAH--------------------- 757
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI-VLGGYGKAGMFDQMERVLSGMLES 279
LY + N ++ I ++ YGK ++ + E L G L
Sbjct: 758 --------------HLLYHAEKNGIILDNDISVYIDIVETYGKLKIWQKAES-LVGSLRQ 802
Query: 280 ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
K D N ++ +A G + + G P + N L+ A R ++
Sbjct: 803 RCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMRDGPSPTVDSVNGLLQALIVDRRLNE 862
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+ V++ ++ + + S+ +EAF+ G+ ++ + M A G + ++
Sbjct: 863 LYVVIQELQDMGLKISKSSILLTLEAFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLR 922
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
V + + + ++ N+++ + +D M +Y+++++ +P
Sbjct: 923 LLCKCKRVRDVETMLCEMEEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKP 982
Query: 460 DSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
D ET++ + Y ++ ++ ++L + + LE
Sbjct: 983 DEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLE 1016
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 63/393 (16%), Positives = 151/393 (38%), Gaps = 44/393 (11%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P Y +L + + + A +++EM+ EG P LY ++ A R ++ D
Sbjct: 528 KPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLYEVMMHALVRENMWDVVDR 587
Query: 201 TLNQMKTLPNCQPDVYTYSTLIK-ACVD----------AMRFELIETLYQDMDERSVTPN 249
+ M+ L P V + S L+K C D + +EL ++ + +
Sbjct: 588 IIRDMEELSGMNPQVIS-SVLVKGGCYDHAAKMLKVAISNGYELDHEIFLSIMSSYSSSA 646
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV------- 302
++ L + + + ++ + ++ CK ++ L + +KG++
Sbjct: 647 RYSEACELLEFSREHAPNDIQMITEALI-IILCKAK--KLDAALEEYRSKGELGQFRSCT 703
Query: 303 ---------------DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
D+ + + R G++ + ++ Y + + + ++ +
Sbjct: 704 MYESLIQECIQNELFDVASQIFSDMRFNGVESSECLYQGMVSVYCRMDLPETAHHLLYHA 763
Query: 348 RK--LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
K + S Y +++E + + + E + K D K + LI+ YA +G
Sbjct: 764 EKNGIILDNDISVYIDIVETYGKLKIWQKAESLVGSLRQRCSKMDRKVWNALIHAYAFSG 823
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ + + + + V N ++ A I L E+ V + +++ + +
Sbjct: 824 CYERARAIFNTMMRDGPSPTVDSVNGLLQALIVDRRLNELYVVIQELQDMGLKISKSSIL 883
Query: 466 IMTEAYAKEGMNDKVYALEQEKLQMLLEASGHW 498
+ EA+A+ G E +K+ ++A+G++
Sbjct: 884 LTLEAFAQAG-----NLFEVQKIYNGMKAAGYF 911
>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
Length = 862
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 177/409 (43%), Gaps = 36/409 (8%)
Query: 103 KAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPEL 162
K K +N A F + + W ++L++F+ ++ Q + +P E Y ++ LLG+ G +
Sbjct: 100 KNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDK 159
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
+VF+EM +G+ + YTAL+ AY RN + + L++MK P + TY+T+I
Sbjct: 160 CLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKN-EKISPSILTYNTVI 218
Query: 223 KACV-DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV--------- 272
AC + +E + L+ +M + P+ VT N +L G+ D+ E V
Sbjct: 219 NACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGI 278
Query: 273 -------------------------LSGMLESATCKPDVWTMNTILSVFANKGQVDMMER 307
L G + S PD+ + N +L +A G +
Sbjct: 279 VPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMG 338
Query: 308 WYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS 367
+ + + G P T+++L+ +G+ YD + + M+ ++TYN +IE F
Sbjct: 339 VFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFG 398
Query: 368 DMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVS 427
+ G K + F M E ++ D +T+ +I GL ++ + I +
Sbjct: 399 EGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSK 458
Query: 428 FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
Y VI A +A E + M E P ETF + ++A+ G+
Sbjct: 459 AYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGL 507
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 146/347 (42%), Gaps = 2/347 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ GK + E + EM G P Y LL AY ++ I EA
Sbjct: 280 PDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGV 339
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+QM+ C P+ TYS L+ + R++ + L+ +M + P+ T NI++ +G
Sbjct: 340 FHQMQA-AGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFG 398
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G F ++ + M+E +PD+ T I+ G + + + I P +
Sbjct: 399 EGGYFKEVVTLFHDMVEE-NIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSS 457
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+ + +I A+G+ +Y++ M ++ + T+++++ +F+ G K E +
Sbjct: 458 KAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSR 517
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
+ G+ + TF I Y G F + + + K + + AV+S A
Sbjct: 518 LVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARL 577
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
+ E ++ MK P + +M Y K D V L +E L
Sbjct: 578 VDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEML 624
>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1429
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 173/360 (48%), Gaps = 11/360 (3%)
Query: 119 VLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPT 178
V ++ W +AL+VFE L + +Y P +L +LGK+ Q LA ++F E ++ T
Sbjct: 151 VGQENWQRALEVFEWLNLRHWYSPNARMLATILAVLGKANQEALAVEIFIR-AESTVDNT 209
Query: 179 PELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV--DAMRFELIET 236
++Y A++ Y R ++ L+ M+ C+PD+ +++TLI A + AM +
Sbjct: 210 VQVYNAMMGVYARTGRFNKVQGMLDLMRE-RGCEPDLVSFNTLINARLKAGAMTPNVAIE 268
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
L ++ + P+ +T N ++ + ++ +V M E+ C+PD+WT N ++SV+
Sbjct: 269 LLNEVRRSGLRPDIITYNTLISACSRESNLEEAVKVFDDM-EAHYCQPDLWTYNAMISVY 327
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
G E+ +++ + G P+ T+N L+ A+ ++ DK+ + M ++ F
Sbjct: 328 GRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDE 387
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
TYN +I + G + M G D T+ LI+ A +K++ + +
Sbjct: 388 MTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKA---NKMVEAANV 444
Query: 417 ASK---LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
S+ + + + Y+A+I +A +E E + M+ RPD +S+M + + +
Sbjct: 445 MSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFLR 504
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 143/295 (48%), Gaps = 2/295 (0%)
Query: 160 PELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYS 219
P +A ++ NE+ G+ P Y L++A R S ++EA + M+ CQPD++TY+
Sbjct: 263 PNVAIELLNEVRRSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEA-HYCQPDLWTYN 321
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
+I E L+++++ + P+ VT N +L + + G D+++ + + M++
Sbjct: 322 AMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQM 381
Query: 280 ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
+ D T NTI+ ++ +GQ + + Y + G P+ T+ +LI + GK +
Sbjct: 382 GFIR-DEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMVE 440
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
++VM M + T TY+ +I ++ G E TF+ M G++ D + +++
Sbjct: 441 AANVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLD 500
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
+ K + R + I + + Y A++ + + + +++R+ + M+E
Sbjct: 501 VFLRFDEATKAMMLYREMVRDGITPDPTVYGAMLRNLGRENKVEDIQRIIRDMEE 555
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 145/332 (43%), Gaps = 6/332 (1%)
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
SG E AR VFN M+ +G PT + LL A + ++E +V +++ + Q
Sbjct: 783 SGCYEQARAVFNTMMRDGPSPTVDSINGLLQALIVDGRLEELYVVTQEIQDM-GFQISKS 841
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
+ ++ A + +YQ M P I++G K +E +++ M
Sbjct: 842 SILLILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEM 901
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
E A +PD+ N++L ++ + Y++ + G+ P+ T+N LI Y +
Sbjct: 902 -EEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHR 960
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
++ S+M MR++ TY ++I AF E FE++ ++G K D +
Sbjct: 961 PEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEELLSKGSKLDRSFYHI 1020
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
++ Y N+G K + + + ++ + ++ + + E E+V +KE
Sbjct: 1021 MMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMG 1080
Query: 457 CRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
+ +S + +AY K +K Y++ +KL
Sbjct: 1081 LSLSTLPYSSVIDAYLK----NKDYSVGIQKL 1108
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 97/205 (47%), Gaps = 3/205 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+ +Q+++ +KE QP E TY L+V+ + +PE + +EM G+EP + Y +L
Sbjct: 928 KTVQIYQRIKEDGL-QPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSL 986
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+AA+ + L+ +A ++ + + D Y ++K ++ E L M +
Sbjct: 987 IAAFGKQQLVVDAEELFEELLS-KGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAG 1045
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
V P T ++++ YG +G + E+VL+ + E + + I + NK +
Sbjct: 1046 VEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLSTLPYSSVIDAYLKNKDYSVGI 1105
Query: 306 ERWYEKFRNFGIDPETRTFNILIGA 330
++ E + G++P+ R + I A
Sbjct: 1106 QKLVE-MKKEGLEPDHRIWTCFIRA 1129
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 118/306 (38%), Gaps = 35/306 (11%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLID--E 197
+Q + + + +L + A+K++ M G PT LY ++ C+ + E
Sbjct: 836 FQISKSSILLILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVE 895
Query: 198 AFVT-------------LNQMKTL-------------------PNCQPDVYTYSTLIKAC 225
A VT N M L QPD TY+TLI
Sbjct: 896 AMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMY 955
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
R E +L +M + P T ++ +GK + E + +L + K D
Sbjct: 956 CRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEELLSKGS-KLD 1014
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
+ ++ ++ N G E+ ++ G++P T ++L+ +YG + V+
Sbjct: 1015 RSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLT 1074
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
++++ ++ Y++VI+A+ D +M EG++ D + + C I + +
Sbjct: 1075 NLKEMGLSLSTLPYSSVIDAYLKNKDYSVGIQKLVEMKKEGLEPDHRIWTCFIRAASLSE 1134
Query: 406 LFHKVI 411
H I
Sbjct: 1135 HTHDAI 1140
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/335 (16%), Positives = 137/335 (40%), Gaps = 44/335 (13%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA--FVTLNQMKTLP--NCQPDVYTY 218
A ++F++M G++P+ LY +++ YC+ + A + L +++ +P DV
Sbjct: 683 ASQIFSDMRFNGVKPSKSLYRSMVLMYCKMGFPETAHYLIDLAEIEGMPFDKISIDVAVI 742
Query: 219 STLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
T K + ++ E+L ++ +R + N ++ Y +G ++Q V + M+
Sbjct: 743 ETYGKLKL----WQKAESLVGNLRQRCTNVDRKVWNALIQAYAASGCYEQARAVFNTMMR 798
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
P V ++N +L G+++ + ++ ++ G + +++ A+ +
Sbjct: 799 DGP-SPTVDSINGLLQALIVDGRLEELYVVTQEIQDMGFQISKSSILLILDAFARVSNIA 857
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+ + + M+ + T Y +I + +E +M G + D
Sbjct: 858 EAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPD-------- 909
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
+S +N+++ DD + ++Y+R+KE +
Sbjct: 910 ---------------------------LSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQ 942
Query: 459 PDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
PD +T++ + Y ++ ++ +L E ++ LE
Sbjct: 943 PDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLE 977
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 95/210 (45%), Gaps = 5/210 (2%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P+ + TIL+V Q + + + + +D + +N ++G Y + ++K+ +
Sbjct: 174 PNARMLATILAVLGKANQEALAVEIFIRAES-TVDNTVQVYNAMMGVYARTGRFNKVQGM 232
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE---QMHAEGMKADTKTFCCLING 400
++ MR+ ++N +I A G A E ++ G++ D T+ LI+
Sbjct: 233 LDLMRERGCEPDLVSFNTLINARLKAG-AMTPNVAIELLNEVRRSGLRPDIITYNTLISA 291
Query: 401 YANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
+ + + ++ YNA+IS + + E+++K ++ K PD
Sbjct: 292 CSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKGYFPD 351
Query: 461 SETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
+ T++ + A+A+EG DKV + E +QM
Sbjct: 352 AVTYNSLLYAFAREGNVDKVKEICNEMVQM 381
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 75/381 (19%), Positives = 145/381 (38%), Gaps = 21/381 (5%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
Q +A + F+ ++ +P + Y +L + + + A ++ EMV +GI P P +Y
Sbjct: 472 QRLEAEETFDCMRRSGI-RPDQLAYSVMLDVFLRFDEATKAMMLYREMVRDGITPDPTVY 530
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVD--AMRFELIETLYQ 239
A+L R + +++ + M+ + P S L+K C + A L +
Sbjct: 531 GAMLRNLGRENKVEDIQRIIRDMEEVCGMNPQAIA-SILVKGECYEDAAGMLRLAISGSD 589
Query: 240 DMDERSVTPNTVTQNIVLGGYGK-AGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
++D + N ++ G+ A D ++ L+ K + +
Sbjct: 590 EID----SENLLSILSSYSSSGRQAEALDLLQ-----FLKGHVSKSNQLVAEASIVTLCK 640
Query: 299 KGQVDMMERWYEKFRNFG-IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
Q+D + Y R F + LI + + S + MR + S
Sbjct: 641 AKQLDAALKEYNDTREFDWFTGSCTMYESLIQCCEENEFTAEASQIFSDMRFNGVKPSKS 700
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF-CCLINGYANAGLFHKVISSVRL 416
Y +++ + MG + Y + EGM D + +I Y L+ K S V
Sbjct: 701 LYRSMVLMYCKMGFPETAHYLIDLAEIEGMPFDKISIDVAVIETYGKLKLWQKAESLV-- 758
Query: 417 ASKLQIAENVS--FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
+ Q NV +NA+I A + + V+ M P ++ + + +A +
Sbjct: 759 GNLRQRCTNVDRKVWNALIQAYAASGCYEQARAVFNTMMRDGPSPTVDSINGLLQALIVD 818
Query: 475 GMNDKVYALEQEKLQMLLEAS 495
G +++Y + QE M + S
Sbjct: 819 GRLEELYVVTQEIQDMGFQIS 839
>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
Length = 431
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 154/333 (46%), Gaps = 2/333 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY ++ L K+G LA ++M++ G+EP LY +L + ++IDEA
Sbjct: 46 KPNAYTYKCVIQSLVKAGNVVLAMDFLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEACK 105
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
MK++ C D YTY+ LI++ R E L+ +M+ER TP+ V+ Y
Sbjct: 106 LFASMKSM-GCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIY 164
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
KAG + VL ML+ PD +T+N++++ + G+ ++ +E+ + G+
Sbjct: 165 CKAGRIESAMVVLKKMLDK-NLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVN 223
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T +FN ++ GK M+ M S T+N +I A +
Sbjct: 224 TVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQ 283
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M + G+ D T+ C+I +A AG K K + NV YN +I A +KA
Sbjct: 284 EMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAG 343
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ +Y MK+K PD+ T +++ + K
Sbjct: 344 RYQDARDIYFDMKKKGILPDAITATVLQQLAGK 376
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 140/318 (44%), Gaps = 13/318 (4%)
Query: 174 GIEPTPELY-----TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
I+ TP Y A++AAY R+S I + ++ + +P+ YTY +I++ V A
Sbjct: 4 AIQDTPCRYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGS-KPNAYTYKCVIQSLVKA 62
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
L M + + P+T+ N+VL G GKA M D+ ++ + M +S C D +T
Sbjct: 63 GNVVLAMDFLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASM-KSMGCPADDYT 121
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
++ + + +++ G P + +I Y K + V++ M
Sbjct: 122 YAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKML 181
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
T N++I A S G + FE+M G+ +T +F +++ AG
Sbjct: 182 DKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAG--- 238
Query: 409 KVISSVRLASKLQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
KV + + +++ I N +N +I+ +A E +V + M+ PD T++
Sbjct: 239 KVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYT 298
Query: 466 IMTEAYAKEGMNDKVYAL 483
M EA+AK G K + +
Sbjct: 299 CMIEAFAKAGNMGKAFEM 316
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 111/276 (40%), Gaps = 1/276 (0%)
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
C+ V + +I A + R + +Q++D+ PN T V+ KAG
Sbjct: 10 CRYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAM 69
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
L M+++ +PD N +L +D + + ++ G + T+ ILI +
Sbjct: 70 DFLDKMIKTGL-EPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIRS 128
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
G+ + ++ + + + M + ++ Y NVI+ + G + ++M + + D
Sbjct: 129 LGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPD 188
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
T LI + G K +A N +NA++ C KA + +
Sbjct: 189 DYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMD 248
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
M+ + +P+S TF+ + + + Y + QE
Sbjct: 249 EMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQE 284
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 174/372 (46%), Gaps = 3/372 (0%)
Query: 103 KAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPEL 162
K K +N A F + + W ++L++F+ ++ Q + +P E Y ++ LLG+ G E
Sbjct: 101 KNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEK 160
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
+ ++F EM G+ + YTAL+ +Y R+ + + L +MK P + TY+T+I
Sbjct: 161 STEIFEEMPTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMKK-EKVTPSILTYNTVI 219
Query: 223 KACV-DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
+C + +E + +L+ +M + P+ +T N +L G+ D+ E V M E
Sbjct: 220 NSCARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGM 279
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
PD+ T ++ F +++ + ++ + G P+ ++N+L+ AY K
Sbjct: 280 V-PDITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAM 338
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
V M++ + + TY+ ++ + G + F +M + D T+ LI +
Sbjct: 339 GVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVF 398
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
G F +V++ + + N+ Y +I AC K + +++ M EK P +
Sbjct: 399 GEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPST 458
Query: 462 ETFSIMTEAYAK 473
+ ++ + EAY +
Sbjct: 459 KAYTGVIEAYGQ 470
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 156/357 (43%), Gaps = 3/357 (0%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
W L +F ++ + QP TY LL G + A VF M E G+ P Y
Sbjct: 228 NWEGLLSLFAEMRHEGI-QPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTY 286
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
L+ + + + +++ L +M++ N PD+ +Y+ L++A +++ M
Sbjct: 287 RNLVETFGKLNKLEKVSELLKEMESSGNL-PDISSYNVLLEAYASKGDIRHAMGVFRQMQ 345
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
E PN VT +++L YG G +D + + M S T +PDV T N ++ VF G
Sbjct: 346 EARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNT-EPDVGTYNVLIEVFGEGGYF 404
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ + ++P T+ LI A GK +++ ++ +M + ++ Y V
Sbjct: 405 KEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGV 464
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
IEA+ + F M+ G K +T+ LIN +A GL+ + + + + +
Sbjct: 465 IEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKMGESGV 524
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
A + +N VI + E + Y +++ +PD TF + Y G+ D+
Sbjct: 525 ARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCTAGLVDE 581
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 151/361 (41%), Gaps = 3/361 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A VF + E P TY L+ GK + E ++ EM G P Y L
Sbjct: 266 EAEMVFRTMNEGGMV-PDITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVL 324
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L AY I A QM+ C P+ TYS L+ R++ + L+ +M +
Sbjct: 325 LEAYASKGDIRHAMGVFRQMQE-ARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSN 383
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ T N+++ +G+ G F ++ + M+E +P++ T ++ G +
Sbjct: 384 TEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEE-NVEPNMGTYEGLIYACGKGGLHEDA 442
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++ GI P T+ + +I AYG+ Y++ + M ++ T TYN++I
Sbjct: 443 KKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINM 502
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
F+ G K E +M G+ D +F +I GY G F + I + K + +
Sbjct: 503 FARGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPD 562
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
+ AV+S A + E E ++ ++ P + +M YA+ D Y +
Sbjct: 563 ERTFEAVLSVYCTAGLVDESEEQFREIRASGILPSVMCYCMMIAVYARSNRWDDAYEVLD 622
Query: 486 E 486
E
Sbjct: 623 E 623
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 137/291 (47%), Gaps = 7/291 (2%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
N + E F + K+ + +F + E+ +P GTY L+ GK G E A+K+
Sbjct: 392 NVLIEVFGEGGYFKE---VVTLFHDMVEENV-EPNMGTYEGLIYACGKGGLHEDAKKILL 447
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
M E+GI P+ + YT ++ AY + + +EA V N M + +P V TY++LI
Sbjct: 448 HMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEM-GSKPTVETYNSLINMFARG 506
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
++ E + M E V + + N V+ GY + G F++ + LE A +PD T
Sbjct: 507 GLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYV-ELEKARFQPDERT 565
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
+LSV+ G VD E + + R GI P + ++I Y + +D V++ M
Sbjct: 566 FEAVLSVYCTAGLVDESEEQFREIRASGILPSVMCYCMMIAVYARSNRWDDAYEVLDEMV 625
Query: 349 KLQFPWTSSTYNNVIEA-FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+ +++ + D + + +EY F+++++EG + + L+
Sbjct: 626 TNKVSNIHQVVGKMMKGDYDDYSNWQMVEYVFDKLNSEGCGLGMRFYNTLL 676
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 156/346 (45%), Gaps = 2/346 (0%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y+P TY LL + GK+G A V EM E Y L+AAY R EA
Sbjct: 319 YEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAA 378
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
V + +M T P+ TY+T+I A A + + L+ M E PNT T N VL
Sbjct: 379 VVI-EMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSM 437
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
GK ++M ++L M +S C P+ T NTIL++ NKG + R + + ++ G +P
Sbjct: 438 LGKKSRSNEMIKMLCDM-KSNGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEP 496
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ TFN LI AYG+ S + M + F +TYN ++ A + GD + E
Sbjct: 497 DRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVI 556
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
M ++G K ++ ++ YA G + + ++ QI + ++ A K
Sbjct: 557 SDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKC 616
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
L ER + K+ +PD F+ M + + M D+ + Q
Sbjct: 617 RALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQ 662
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 143/334 (42%), Gaps = 2/334 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ +L L G G + +VF EM G EP + + L++AY R +A
Sbjct: 461 PNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKM 520
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+M T V TY+ L+ A + E + DM + P + +++L Y
Sbjct: 521 YGEM-TRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYA 579
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G + +ER+ G+ E P + T+L + ER + F+ G P+
Sbjct: 580 KGGNYLGIERIEEGINEGQIF-PSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDM 638
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
FN ++ + + MYD+ +++ + + TYN++++ + G+ E +
Sbjct: 639 VIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKT 698
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
+ +K D ++ +I G+ GL + + + ++ I + YN +S
Sbjct: 699 LEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGM 758
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
E+E V + M + CRP+ TF ++ + Y + G
Sbjct: 759 YGEIEDVIECMAKNDCRPNELTFKMVVDGYCRAG 792
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 132/270 (48%), Gaps = 6/270 (2%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
DV Y+T++ A ++E L++ M E +P VT N++L +GK G + R +
Sbjct: 216 DVRAYTTILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNVILDVFGKMG---RSWRKI 272
Query: 274 SGMLE---SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
G+LE S K D +T +T+LS A +G + + ++ + ++ G +P T T+N L+
Sbjct: 273 LGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQV 332
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
+GK +Y + SV++ M + P S TYN ++ A++ G +K E M +G+ +
Sbjct: 333 FGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPN 392
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
T+ +I+ Y AG + + + N YNAV+S K EM ++
Sbjct: 393 AITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLC 452
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
MK C P+ T++ + +GM+ V
Sbjct: 453 DMKSNGCFPNRATWNTILALCGNKGMDKFV 482
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 158/397 (39%), Gaps = 52/397 (13%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A V EM+ ++ P TY ++ GK+G+ + A K+F M E G P Y A+
Sbjct: 376 EAAVVIEMMTQKGV-MPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAV 434
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L+ + S +E L MK+ C P+ T++T++ C + + + ++++M
Sbjct: 435 LSMLGKKSRSNEMIKMLCDMKS-NGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCG 493
Query: 246 VTPNTVTQNIVLGGYGKAG-------MFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
P+ T N ++ YG+ G M+ +M R A V T N +L+ A
Sbjct: 494 FEPDRDTFNTLISAYGRCGSEVDASKMYGEMTR--------AGFNACVTTYNALLNALAR 545
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ-FP-W-- 354
KG E ++ G P ++++++ Y K Y + + E + + Q FP W
Sbjct: 546 KGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWML 605
Query: 355 -------------------------------TSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
+N+++ F+ E + +H
Sbjct: 606 LRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIH 665
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
+G+ D T+ L++ Y G K ++ K Q+ ++ YN VI + +
Sbjct: 666 EDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQ 725
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
E R+ M E+ RP T++ Y GM ++
Sbjct: 726 EAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMYGEI 762
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QA + + + E P TY L+ + + G+ A ++ + + ++P Y +
Sbjct: 656 QAEGILQSIHEDGL-NPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTV 714
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +CR L+ EA L++M T +P ++TY+T + + IE + + M +
Sbjct: 715 IKGFCRKGLMQEAVRMLSEM-TERGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECMAKND 773
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQ 268
PN +T +V+ GY +AG + +
Sbjct: 774 CRPNELTFKMVVDGYCRAGKYSE 796
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 182/376 (48%), Gaps = 15/376 (3%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
+ +A +VF+ ++ F +P + T LL + GK+ + + A V EM + G P+ Y
Sbjct: 263 YKEAAKVFDEMRAAGF-EPDKVTLNSLLDVYGKARRYDEAIGVLKEMEQGGCPPSVVTYN 321
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
+L+++Y ++ L++EA L + + +PDV TY+TL+ A + + Y +M
Sbjct: 322 SLISSYVKDGLLEEA-TQLKEEMEVKGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLR 380
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
PN T N ++ +G G F +M V + SA PDV T NT+L+VF G
Sbjct: 381 NGCKPNLCTYNALIKLHGVRGKFPEMMIVFD-EIRSAGFVPDVVTWNTLLAVFGQNGLDT 439
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ +++ + G PE T+ LI +Y + ++D+ + + M + STYN V+
Sbjct: 440 EVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVL 499
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
A + G + E F +M + D ++ L++ YANA K + ++ S+ A
Sbjct: 500 SALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANA----KKLDKMKSLSEDIYA 555
Query: 424 ENVSFYNAVISACI----KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
E + +N ++ + K ++L + E+ + ++ + C D + M Y K GM K
Sbjct: 556 ERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKK 615
Query: 480 VYALEQEKLQMLLEAS 495
V +E L ++ E+S
Sbjct: 616 V----EEILSLMKESS 627
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 164/381 (43%), Gaps = 36/381 (9%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI-DEAF 199
P Y L+ L ++ + A VF MV G+ P Y +L Y + ++ E
Sbjct: 173 DPDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVL 232
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
++ M+ D YTY+TLI C ++ ++ +M P+ VT N +L
Sbjct: 233 ALVDSMRK-DGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDV 291
Query: 260 YGKA-------GMFDQMER-----------------VLSGMLESAT----------CKPD 285
YGKA G+ +ME+ V G+LE AT +PD
Sbjct: 292 YGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPD 351
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
V T T++S G++D Y + G P T+N LI +G + + +M V +
Sbjct: 352 VITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFD 411
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
+R F T+N ++ F G + F++M G + T+ LI+ Y+ G
Sbjct: 412 EIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCG 471
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
LF + + + + I ++S YNAV+SA + + E+++ M+ RPD ++S
Sbjct: 472 LFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYS 531
Query: 466 IMTEAYAKEGMNDKVYALEQE 486
+ AYA DK+ +L ++
Sbjct: 532 SLLHAYANAKKLDKMKSLSED 552
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 173/407 (42%), Gaps = 43/407 (10%)
Query: 105 KAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELAR 164
K +N++ + + +++ +A+ V + + EQ P TY L+ K G E A
Sbjct: 282 KVTLNSLLDVYGK---ARRYDEAIGVLKEM-EQGGCPPSVVTYNSLISSYVKDGLLEEAT 337
Query: 165 KVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPN-CQPDVYTYSTLIK 223
++ EM +GIEP YT L++ R ID A T N+M L N C+P++ TY+ LIK
Sbjct: 338 QLKEEMEVKGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEM--LRNGCKPNLCTYNALIK 395
Query: 224 ACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG---------------------- 261
+F + ++ ++ P+ VT N +L +G
Sbjct: 396 LHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVP 455
Query: 262 -------------KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW 308
+ G+FDQ + M+E A PD+ T N +LS A G+ + E+
Sbjct: 456 ERDTYVSLISSYSRCGLFDQAMEIYKRMIE-AGIHPDISTYNAVLSALARGGRWEQAEKL 514
Query: 309 YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD 368
+ + N P+ +++ L+ AY + DKM S+ E + + + ++ S
Sbjct: 515 FAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSK 574
Query: 369 MGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSF 428
+ + E F ++ D +I+ Y G+ KV + L + I + +
Sbjct: 575 VNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTAT 634
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
YN+++ + D + E + +K RPD +++ M AY ++G
Sbjct: 635 YNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKG 681
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/400 (21%), Positives = 177/400 (44%), Gaps = 24/400 (6%)
Query: 94 LKKKLERKAKAKAWVNTVAETFSD---------------HVLKKQWFQALQVFEMLKEQP 138
L L+R K A + T E + H ++ ++ + + VF+ ++
Sbjct: 358 LVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAG 417
Query: 139 FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA 198
F P T+ LL + G++G VF EM + G P + Y +L+++Y R L D+A
Sbjct: 418 FV-PDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQA 476
Query: 199 FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
+M PD+ TY+ ++ A R+E E L+ +M+ P+ ++ + +L
Sbjct: 477 MEIYKRMIE-AGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLH 535
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
Y A D+M + LS + + + + T++ V + + E+ + + R
Sbjct: 536 AYANAKKLDKM-KSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCS 594
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
+ N +I YGK M K+ ++ M++ +++TYN+++ +S +GD + E
Sbjct: 595 LDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENI 654
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISA 435
++ + + D ++ +I Y G ++ + RL S+++ + ++ YN + +
Sbjct: 655 LTEIKSSRARPDRYSYNTMIYAYGRKG---QMKEASRLFSEMKCSGLVPDIVTYNIFVKS 711
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ E + + M C+P+ T++ + + Y G
Sbjct: 712 YVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCSHG 751
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 89/207 (42%), Gaps = 1/207 (0%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM-YDKMSS 342
PD ++S + + + + G+ P T+N+++ Y K + + ++ +
Sbjct: 174 PDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLA 233
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+++ MRK P TYN +I K F++M A G + D T L++ Y
Sbjct: 234 LVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYG 293
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
A + + I ++ + +V YN++IS+ +K L E ++ + M+ K PD
Sbjct: 294 KARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVI 353
Query: 463 TFSIMTEAYAKEGMNDKVYALEQEKLQ 489
T++ + + G D E L+
Sbjct: 354 TYTTLVSGLDRAGKIDAAIGTYNEMLR 380
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 174/375 (46%), Gaps = 3/375 (0%)
Query: 103 KAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPEL 162
K K +N A F + + W ++L++F+ ++ Q + +P E Y ++ LLG+ G +
Sbjct: 100 KNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDK 159
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
+VF+EM +G+ + YTAL+ AY RN + + L++MK P + TY+T+I
Sbjct: 160 CLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKN-DKISPSILTYNTVI 218
Query: 223 KACV-DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
AC + +E + L+ +M + P+ VT N +L G+ D+ E V M +
Sbjct: 219 NACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGI 278
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
PD+ T + ++ F +++ + + + G P+ ++N+L+ AY K +
Sbjct: 279 V-PDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAM 337
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
V M+ ++TY+ ++ F G + F +M + D T+ LI +
Sbjct: 338 GVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVF 397
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
G F +V++ + I ++ Y +I AC K + ++ + M P S
Sbjct: 398 GEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSS 457
Query: 462 ETFSIMTEAYAKEGM 476
+ ++ + EA+ + +
Sbjct: 458 KAYTGVIEAFGQAAL 472
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 147/347 (42%), Gaps = 2/347 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ GK + E + +EM G P Y LL AY ++ I EA
Sbjct: 280 PDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGV 339
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+QM+ C P+ TYS L+ + R++ + L+ +M + P+ T NI++ +G
Sbjct: 340 FHQMQA-AGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFG 398
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G F ++ + M+E +PD+ T I+ G + + + I P +
Sbjct: 399 EGGYFKEVVTLFHDMVEE-NIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSS 457
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+ + +I A+G+ +Y++ M ++ + TY++++ +F+ G K E +
Sbjct: 458 KAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAILSR 517
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
+ G+ + TF I Y G F + + + K + + AV+S A
Sbjct: 518 LVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARL 577
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
+ E ++ MK P + +M Y K D V L +E L
Sbjct: 578 VDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEML 624
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 174/396 (43%), Gaps = 44/396 (11%)
Query: 122 KQWFQALQ-VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
++W +A + V +M+ P TY LL K+G+ E +R++ E++ G+ P
Sbjct: 59 ERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDAL 118
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
+YT ++A+ C+++ + EA L +M C P + T++TLI C E+ ++L Q
Sbjct: 119 MYTKVMASLCKSARLGEALELLEEM-IRAGCCPTLITFNTLISGCCREKNLEMADSLLQT 177
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M V + VT N ++ G KAG + E++L M +++ C PDV ++ + G
Sbjct: 178 MAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERM-KASGCAPDVVAYSSFVYGLCKSG 236
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST-Y 359
+V + E+ R+ DP T+N ++ K D +ME M + Y
Sbjct: 237 KVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGY 296
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-------------- 405
+ V++ +G + E M G + D T+ L+NG AG
Sbjct: 297 STVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAM 356
Query: 406 ------------LFHKVISSVRLASKLQIAE--------------NVSFYNAVISACIKA 439
L H + S RLA ++ E +VS YNA+I KA
Sbjct: 357 EGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKA 416
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + + ++RM+ + C PD ++S + E A+ G
Sbjct: 417 GRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSG 452
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 111/266 (41%), Gaps = 10/266 (3%)
Query: 114 TFSDHVLKKQWFQ-ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE 172
T D + K Q A Q+ E +K P Y + L KSG+ A +V +M +
Sbjct: 192 TLMDGLCKAGRLQEAEQLLERMKASGC-APDVVAYSSFVYGLCKSGKVLNAHQVLEQMRD 250
Query: 173 EGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE 232
+P Y +L C++ ID A + QM + C +V YST++ R +
Sbjct: 251 SDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQ 310
Query: 233 LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ-MERVLSGMLESATCKPDVWTMNT 291
++ + M P+ VT + ++ G KAG ++ +E V +E CKP+ T +
Sbjct: 311 EARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG--CKPNAVTYCS 368
Query: 292 ILSVFANKGQVDMMERWYEKFRNFG-----IDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
++ + G++ ER E+ + G P T+N LIG K D +
Sbjct: 369 LVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQR 428
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDA 372
MR +Y+ ++E + G A
Sbjct: 429 MRSQGCDPDGVSYSTIVEGLARSGRA 454
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 118/270 (43%), Gaps = 1/270 (0%)
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
C P+ T++ L+ R E L + M R + PN V+ N +L G K + +
Sbjct: 5 GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEA 64
Query: 270 ERVLSGML-ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
E ++ M+ PD+ T +T+LS + G+V+ ++ + G+ P+ + ++
Sbjct: 65 EELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVM 124
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
+ K + ++E M + T T+N +I + + + + M A G+K
Sbjct: 125 ASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVK 184
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
AD T+ L++G AG + + A +V Y++ + K+ ++ +V
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQV 244
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
++M++ P+ T++ + + K G D
Sbjct: 245 LEQMRDSDHDPNVVTYNTILDGLCKSGKID 274
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 178/376 (47%), Gaps = 11/376 (2%)
Query: 119 VLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPT 178
V ++ W +AL+V+E L + +Y P +L +LGK+ Q LA +VF E T
Sbjct: 195 VGQESWHRALEVYEWLNLRHWYSPNARMLSTILSVLGKANQEALAVEVFMR-AEPSAGNT 253
Query: 179 PELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV--DAMRFELIET 236
++Y A++ Y R ++ L+ M+ C+PD+ +++TLI A + AM L
Sbjct: 254 VQVYNAMMGVYARRGRFNKVQELLDLMRE-RGCKPDLVSFNTLINARLKAGAMMPNLAIE 312
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
L ++ + P+T+T N ++ +A ++ +V M E+ C+PD+WT N ++SV+
Sbjct: 313 LLNEVRRSGLRPDTITYNTLISACSRASNLEEAAKVFDDM-EAHHCQPDLWTYNAMISVY 371
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
G E+ + + G P+ ++N L+ A+ ++ +K+ + E M K+ F
Sbjct: 372 GRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDE 431
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
TYN +I + G + + M + G D T+ LI+ + G +K+ + +
Sbjct: 432 MTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLID---SLGKTNKIAEAAGV 488
Query: 417 ASKL---QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
S++ + + Y+A+I KA +E E + M RPD +S+M + + +
Sbjct: 489 MSEMLNTGVKPTLKTYSALICGYAKAGKPVEAEETFDCMLRSGIRPDHLAYSVMLDIHLR 548
Query: 474 EGMNDKVYALEQEKLQ 489
+ L +E L
Sbjct: 549 FNEPKRAMTLYKEMLH 564
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 132/299 (44%), Gaps = 6/299 (2%)
Query: 125 FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
F+ +++ +K ++ P Y + LL + Q + +EM E G +P ++ +
Sbjct: 900 FEVKKIYHGMKAAGYF-PTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNS 958
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
+L Y + ++K +PD TY+TLI R E +L +M
Sbjct: 959 VLKMYVAIEDFRKTIQVYQRIKE-DGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVA 1017
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ P T ++ +GK + +Q E + L+S CK D +T++ ++ N G
Sbjct: 1018 GLEPKLDTYKSLVASFGKQQLVEQAEELFEE-LQSKGCKLDRSFYHTMMKIYRNSGSHSK 1076
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
ER + ++ G++P T ++L+ +YG + V+ +++ ++ Y++VI+
Sbjct: 1077 AERLFSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLSTLPYSSVID 1136
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
A+ GD QM EG++ D + + C I A L + ++ L + LQ A
Sbjct: 1137 AYLRNGDYNIGIQKLIQMKKEGLEPDHRIWTCFIRA---ASLSRRTSEAIVLLNALQDA 1192
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 137/319 (42%), Gaps = 2/319 (0%)
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
SG E AR +FN M+ +G PT + LL A + +DE +V + +++ + +
Sbjct: 826 SGCYERARAIFNTMMRDGPSPTVDTINGLLQALIVDGRLDELYVVVQELQDM-GFKISKS 884
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
+ ++ A A ++ +Y M P ++ + +E +LS M
Sbjct: 885 SILLMLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEM 944
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
E A KPD+ N++L ++ + Y++ + G++P+ T+N LI Y +
Sbjct: 945 -EEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHR 1003
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
++ S+M MR TY +++ +F + E FE++ ++G K D +
Sbjct: 1004 PEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHT 1063
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
++ Y N+G K + + ++ + ++ + + E E+V +KE
Sbjct: 1064 MMKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETG 1123
Query: 457 CRPDSETFSIMTEAYAKEG 475
+ +S + +AY + G
Sbjct: 1124 SNLSTLPYSSVIDAYLRNG 1142
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/366 (19%), Positives = 156/366 (42%), Gaps = 12/366 (3%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYM--KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
+AL + E LKE + P+ + L+V+L K+ Q + A K ++ E G + ++
Sbjct: 655 EALDLLEFLKE---HSPRSSQMITEALVVMLCKAQQLDAALKEYSNNRELGFTGSFTMFE 711
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRF-ELIETLYQDMD 242
+L+ N LI EA + M+ + S ++ C M F E L +
Sbjct: 712 SLIQCCLENELITEASQVFSDMRFCGIKASESLYESMVLLYC--KMGFPETAHHLIDFAE 769
Query: 243 ERSVTPNTVTQNI-VLGGYGKAGMFDQMERVLSGMLESA-TCKPDVWTMNTILSVFANKG 300
+ N ++ + V+ YG+ ++ + E V + + T VW N ++ +A G
Sbjct: 770 SDGILLNNISLYVNVIEAYGRLKLWQKAESVAGNLRQRCITVDRKVW--NALIEAYAASG 827
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+ + G P T N L+ A D++ V++ ++ + F + S+
Sbjct: 828 CYERARAIFNTMMRDGPSPTVDTINGLLQALIVDGRLDELYVVVQELQDMGFKISKSSIL 887
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+++AF+ G+ ++ + M A G + + + V + + +
Sbjct: 888 LMLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEA 947
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
++S +N+V+ + +D + +VY+R+KE PD +T++ + Y ++ ++
Sbjct: 948 GFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEG 1007
Query: 481 YALEQE 486
++L E
Sbjct: 1008 FSLMHE 1013
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 90/227 (39%), Gaps = 54/227 (23%)
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR-KLQFPWTSSTYNNVI 363
+ WY P R + ++ GK + +V +MR + T YN ++
Sbjct: 212 LRHWY--------SPNARMLSTILSVLGKAN--QEALAVEVFMRAEPSAGNTVQVYNAMM 261
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-----LFHKVISSVRLAS 418
++ G ++ + M G K D +F LIN AG L ++++ VR +
Sbjct: 262 GVYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSG 321
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE--------- 469
+ + YN +ISAC +A +L E +V+ M+ HC+PD T++ M
Sbjct: 322 ---LRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSG 378
Query: 470 --------------------------AYAKEGMNDKVYALEQEKLQM 490
A+A+EG +KV + +E +++
Sbjct: 379 KAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKI 425
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 69/374 (18%), Positives = 138/374 (36%), Gaps = 48/374 (12%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P Y +L + + +P+ A ++ EM+ +GI LY +L + + +++
Sbjct: 533 RPDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDGITLDHSLYELMLRTLRKVNKVEDIGR 592
Query: 201 TLNQMKTLPNCQPDVYTYST-LIKA-CVDAMRFELIETLYQDMD-ERSVTPNTVTQNIVL 257
+ M+ + C + T S+ L+K C D L + + +R + ++
Sbjct: 593 VIRDMEEI--CGMNTQTISSILVKGECYDEAAKMLRRAISDHFEIDRENLLSILSSYSSS 650
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
G + +A D +E L+ + + ++ + Q+D + Y R G
Sbjct: 651 GRHAEA--LDLLE-----FLKEHSPRSSQMITEALVVMLCKAQQLDAALKEYSNNRELGF 703
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMR-------------------KLQFPWTS-- 356
F LI + + + S V MR K+ FP T+
Sbjct: 704 TGSFTMFESLIQCCLENELITEASQVFSDMRFCGIKASESLYESMVLLYCKMGFPETAHH 763
Query: 357 ---------------STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
S Y NVIEA+ + + E + + D K + LI Y
Sbjct: 764 LIDFAESDGILLNNISLYVNVIEAYGRLKLWQKAESVAGNLRQRCITVDRKVWNALIEAY 823
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
A +G + + + + + V N ++ A I L E+ V + +++ +
Sbjct: 824 AASGCYERARAIFNTMMRDGPSPTVDTINGLLQALIVDGRLDELYVVVQELQDMGFKISK 883
Query: 462 ETFSIMTEAYAKEG 475
+ +M +A+A+ G
Sbjct: 884 SSILLMLDAFARAG 897
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 166/348 (47%), Gaps = 11/348 (3%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
EM E + P TY L+ K G+ + A ++F+EM G+ PT ++YT LLA Y +
Sbjct: 191 EMCNEGDCF-PDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFK 249
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
+ DE + L Q C P V+TY+ LIK + R E +++ +M + P+ V
Sbjct: 250 SG--DEKALGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVV 307
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL-SVFANKGQVDMMERWYE 310
N ++ +GKAG + ++ M S C P+V T NT++ ++F +K W+E
Sbjct: 308 LINNLINIFGKAGRLEDALKLFDQM-RSLKCAPNVVTYNTVIKALFESKAPASEAASWFE 366
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
K + G+ P + T++ILI + K +K ++E M + FP + Y ++I A +G
Sbjct: 367 KMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINA---LG 423
Query: 371 DAKHMEYT---FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVS 427
AK E F ++ ++ + + +I G + + K+ +V
Sbjct: 424 KAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVY 483
Query: 428 FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
YNA++S ++A + E + M+E C PD + +I+ A+ G
Sbjct: 484 AYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTG 531
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 3/208 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL + E + E+ F P Y L+ LGK+ + E A ++F E+ E + +Y +
Sbjct: 395 KALLLLEEMDEKGF-PPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVM 453
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + EA N+MK + C PDVY Y+ L+ V A E + + M+E
Sbjct: 454 IKNLGKCGRPSEAVDLFNEMKKI-GCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENG 512
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
TP+ + NI+L G + G +Q + M +S KPD + NTIL + G +
Sbjct: 513 CTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLI-KPDAVSYNTILGSLSRSGMFEEA 571
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGK 333
+ + + G + + T++ ++ A GK
Sbjct: 572 AKLMREMGSRGFEYDHITYSSILEAVGK 599
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 10/228 (4%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYC---RNSLIDEA 198
P TY L+ K+ + E A + EM E+G P P Y +L+ A R +E
Sbjct: 375 PSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANEL 434
Query: 199 FVTLNQMKTLPNC-QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVL 257
F+ L + NC + Y+ +IK R L+ +M + P+ N ++
Sbjct: 435 FLELKE-----NCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALM 489
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
G +AGM ++ L M E+ C PD+ + N IL+ A G+ + + K ++ I
Sbjct: 490 SGLVRAGMIEEAFSALRTMEENG-CTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLI 548
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
P+ ++N ++G+ + M+++ + +M M F + TY++++EA
Sbjct: 549 KPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEA 596
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 123/286 (43%), Gaps = 28/286 (9%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQP-ELARKVFNEMVEEGIEPTPELYTA 184
AL++F+ ++ P TY ++ L +S P A F +M G+ P+ Y+
Sbjct: 324 DALKLFDQMRSLK-CAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSI 382
Query: 185 LLAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
L+ +C+ + +++A + L +M K P C Y +LI A A R+E L+ ++
Sbjct: 383 LIDGFCKTNRVEKALLLLEEMDEKGFPPCPA---AYCSLINALGKAKRYEAANELFLELK 439
Query: 243 ERSVTPNTVTQNIVLGGYGKAG-------MFDQMERVLSGMLESATCKPDVWTMNTILSV 295
E + +++ GK G +F++M+++ C PDV+ N ++S
Sbjct: 440 ENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKI--------GCNPDVYAYNALMSG 491
Query: 296 FANKGQVDMMERWYEKFRNF---GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF 352
G M+E + R G P+ + NI++ + ++ + + M+
Sbjct: 492 LVRAG---MIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLI 548
Query: 353 PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+ +YN ++ + S G + +M + G + D T+ ++
Sbjct: 549 KPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSIL 594
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 107/295 (36%), Gaps = 71/295 (24%)
Query: 263 AGMFDQMERVLSGMLESAT-----------------------------------CKPDVW 287
G+F +M +++ M+ S T CKP
Sbjct: 108 CGLFGEMWKMIQEMVRSPTCVIGPADLSEVVKILGKAKMVNKALSVFYQIKSRKCKPTAS 167
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFG-IDPETRTFNILIGAYGKK-------RMYDK 339
T N+++ + +G + + Y + N G P+T T+++L+ A+ K R++D+
Sbjct: 168 TYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTMTYSVLVSAFVKLGRDDYAIRLFDE 227
Query: 340 MSS---------------------------VMEYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
M + +++ M+ T TY +I+ G
Sbjct: 228 MKANGLHPTAKIYTTLLAIYFKSGDEKALGLVQEMKDKGCAPTVFTYTELIKGLGKSGRV 287
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAV 432
+ F M +G K D LIN + AG + L+ A NV YN V
Sbjct: 288 EDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTV 347
Query: 433 ISACIKAD-DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
I A ++ E +++MK P S T+SI+ + + K +K L +E
Sbjct: 348 IKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEE 402
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 167/370 (45%), Gaps = 7/370 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A + F LK + Y TY LL + GK+G A + EM + P Y L
Sbjct: 298 EARKFFARLKSEG-YVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNEL 356
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+AAY R +E ++ M P+ TY+T+I A A + + + ++ M E
Sbjct: 357 VAAYVRAGFHEEGADFIDTM-IRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESG 415
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN T N +LG GK ++M +L M S C P+ T NT+L++ NKG +
Sbjct: 416 CVPNVCTYNAILGMLGKKSRLEEMIDMLCDM-RSNGCAPNSVTWNTMLAMCGNKGMHKYV 474
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
R + + ++ G +P TFN LIGAYG+ + + E M K F +TYN ++ A
Sbjct: 475 NRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNA 534
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ GD + E M ++G K + ++ ++N YA G + I +
Sbjct: 535 LARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPS 594
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
++ A K LM MER ++ + +PD F+ M +AK M D+ +
Sbjct: 595 WILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAH---- 650
Query: 486 EKLQMLLEAS 495
E L+++ E+
Sbjct: 651 EMLRLIRESG 660
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 148/333 (44%), Gaps = 4/333 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR-NSLIDEAFV 200
P T+ +L + G G + +VF EM G EP + + AL+ AY R S ID V
Sbjct: 453 PNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQID--VV 510
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ + P V TY+ L+ A +E E++ DM + PN + +++L Y
Sbjct: 511 KMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCY 570
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G +E++ + + +L+ F + + M ER +++F G P+
Sbjct: 571 AKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGM-ERAFQEFCKHGYKPD 629
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
FN ++ + K +MYD+ ++ +R+ TYN++++ ++ G+ E +
Sbjct: 630 LVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILK 689
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+ G K D ++ +I G+ GL + I ++ + I + YN ++
Sbjct: 690 GIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKG 749
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
E+E V M + CRP+ T+ I+ + Y K
Sbjct: 750 MFSEVEEVISYMIQHDCRPNELTYKIVVDGYCK 782
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 178/389 (45%), Gaps = 8/389 (2%)
Query: 99 ERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSG 158
E +AW T+ +S ++ +A+ +FE +++ P TY +L + GK G
Sbjct: 204 EYSLDVRAWT-TILHAYSR---IGKYERAITMFEKMRKTGL-SPTLVTYNVMLDVYGKMG 258
Query: 159 QP-ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
+ + +EM G+E + +++A R L+DEA ++K+ +T
Sbjct: 259 RSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKS-EGYVAGTFT 317
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y++L++ A + ++ ++M++ + P+ VT N ++ Y +AG ++ + M+
Sbjct: 318 YNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMI 377
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
P+ T T+++ + G+ D ++ + + G P T+N ++G GKK
Sbjct: 378 RKGIM-PNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRL 436
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
++M ++ MR S T+N ++ + G K++ F +M + G + + TF L
Sbjct: 437 EEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNAL 496
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
I Y G V+ K V+ YNA+++A + D E V MK K
Sbjct: 497 IGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGF 556
Query: 458 RPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+P+ ++S+M YAK G + +E+E
Sbjct: 557 KPNETSYSLMLNCYAKGGNGRGIEKIEEE 585
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 139/312 (44%), Gaps = 37/312 (11%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM-FDQMERV 272
DV ++T++ A ++E T+++ M + ++P VT N++L YGK G ++++ +
Sbjct: 208 DVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGL 267
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
L M S + D +T +T++S +G +D +++ + ++ G T T+N L+ +G
Sbjct: 268 LDEM-RSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFG 326
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K +Y + S+++ M K P TYN ++ A+ G + + M +G+ +
Sbjct: 327 KAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAI 386
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM------- 445
T+ +IN Y AG K +S R + NV YNA++ K L EM
Sbjct: 387 TYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDM 446
Query: 446 ----------------------------ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
RV++ MK P+ +TF+ + AY + G
Sbjct: 447 RSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQ 506
Query: 478 DKVYALEQEKLQ 489
V + +E ++
Sbjct: 507 IDVVKMYEEMIK 518
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 2/157 (1%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K + +A ++ +++E QP TY L+ + + G+ ++ + + G +P
Sbjct: 644 KMYDRAHEMLRLIRESGL-QPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVS 702
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y ++ +CR L+ EA TL++M T+ +P + TY+T + F +E + M
Sbjct: 703 YNTVIKGFCRQGLMQEAIRTLSEM-TISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYM 761
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
+ PN +T IV+ GY K + + +S + E
Sbjct: 762 IQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNITE 798
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 167/370 (45%), Gaps = 7/370 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A + F LK + Y TY LL + GK+G A + EM + P Y L
Sbjct: 298 EARKFFARLKSEG-YVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNEL 356
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+AAY R +E ++ M P+ TY+T+I A A + + + ++ M E
Sbjct: 357 VAAYVRAGFHEEGADFIDTM-IRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESG 415
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN T N +LG GK ++M +L M S C P+ T NT+L++ NKG +
Sbjct: 416 CVPNVCTYNAILGMLGKKSRLEEMIDMLCDM-RSNGCAPNSVTWNTMLAMCGNKGMHKYV 474
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
R + + ++ G +P TFN LIGAYG+ + + E M K F +TYN ++ A
Sbjct: 475 NRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNA 534
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ GD + E M ++G K + ++ ++N YA G + I +
Sbjct: 535 LARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPS 594
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
++ A K LM MER ++ + +PD F+ M +AK M D+ +
Sbjct: 595 WILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAH---- 650
Query: 486 EKLQMLLEAS 495
E L+++ E+
Sbjct: 651 EMLRLIRESG 660
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 148/333 (44%), Gaps = 4/333 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR-NSLIDEAFV 200
P T+ +L + G G + +VF EM G EP + + AL+ AY R S ID V
Sbjct: 453 PNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQID--VV 510
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ + P V TY+ L+ A +E E++ DM + PN + +++L Y
Sbjct: 511 KMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCY 570
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G +E++ + + +L+ F + + M ER +++F G P+
Sbjct: 571 AKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGM-ERAFQEFCKHGYKPD 629
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
FN ++ + K +MYD+ ++ +R+ TYN++++ ++ G+ E +
Sbjct: 630 LVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILK 689
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+ G K D ++ +I G+ GL + I ++ + I + YN ++
Sbjct: 690 GIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKG 749
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
E+E V M + CRP+ T+ I+ + Y K
Sbjct: 750 MFSEVEEVISYMIQHDCRPNELTYKIVVDGYCK 782
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 178/389 (45%), Gaps = 8/389 (2%)
Query: 99 ERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSG 158
E +AW T+ +S ++ +A+ +FE +++ P TY +L + GK G
Sbjct: 204 EYSLDVRAWT-TILHAYSR---IGKYERAITMFEKMRKTGL-SPTLVTYNVMLDVYGKMG 258
Query: 159 QP-ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
+ + +EM G+E + +++A R L+DEA ++K+ +T
Sbjct: 259 RSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKS-EGYVAGTFT 317
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y++L++ A + ++ ++M++ + P+ VT N ++ Y +AG ++ + M+
Sbjct: 318 YNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMI 377
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
P+ T T+++ + G+ D ++ + + G P T+N ++G GKK
Sbjct: 378 RKGIM-PNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRL 436
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
++M ++ MR S T+N ++ + G K++ F +M + G + + TF L
Sbjct: 437 EEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNAL 496
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
I Y G V+ K V+ YNA+++A + D E V MK K
Sbjct: 497 IGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGF 556
Query: 458 RPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+P+ ++S+M YAK G + +E+E
Sbjct: 557 KPNETSYSLMLNCYAKGGNGRGIEKIEEE 585
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 139/312 (44%), Gaps = 37/312 (11%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM-FDQMERV 272
DV ++T++ A ++E T+++ M + ++P VT N++L YGK G ++++ +
Sbjct: 208 DVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGL 267
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
L M S + D +T +T++S +G +D +++ + ++ G T T+N L+ +G
Sbjct: 268 LDEM-RSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFG 326
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K +Y + S+++ M K P TYN ++ A+ G + + M +G+ +
Sbjct: 327 KAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAI 386
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM------- 445
T+ +IN Y AG K +S R + NV YNA++ K L EM
Sbjct: 387 TYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDM 446
Query: 446 ----------------------------ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
RV++ MK P+ +TF+ + AY + G
Sbjct: 447 RSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQ 506
Query: 478 DKVYALEQEKLQ 489
V + +E ++
Sbjct: 507 IDVVKMYEEMIK 518
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 2/157 (1%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K + +A ++ +++E QP TY L+ + + G+ ++ + + G +P
Sbjct: 644 KMYDRAHEMLRLIRESGL-QPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVS 702
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y ++ +CR L+ EA TL++M T+ +P + TY+T + F +E + M
Sbjct: 703 YNTVIKGFCRQGLMQEAIRTLSEM-TISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYM 761
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
+ PN +T IV+ GY K + + +S + E
Sbjct: 762 IQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNITE 798
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 174/396 (43%), Gaps = 44/396 (11%)
Query: 122 KQWFQALQ-VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
++W +A + V +M+ P TY LL K+G+ E +R++ E++ G+ P
Sbjct: 59 ERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDAL 118
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
+YT ++A+ C+++ + EA L +M C P + T++TLI C E+ ++L Q
Sbjct: 119 MYTKVVASLCKSARLGEALELLEEM-IRAGCCPTLITFNTLISGCCREKNLEMADSLLQK 177
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M V + VT N ++ G KAG + E++L M +++ C PDV ++ + G
Sbjct: 178 MAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERM-KASGCAPDVVAYSSFVYGLCKSG 236
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST-Y 359
+V + E+ R+ DP T+N ++ K D +ME M + Y
Sbjct: 237 KVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGY 296
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-------------- 405
+ V++ +G + E M G + D T+ L+NG AG
Sbjct: 297 STVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAM 356
Query: 406 ------------LFHKVISSVRLASKLQIAE--------------NVSFYNAVISACIKA 439
L H + S RLA ++ E +VS YNA+I KA
Sbjct: 357 EGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKA 416
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + + ++RM+ + C PD ++S + E A+ G
Sbjct: 417 GRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSG 452
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 131/336 (38%), Gaps = 3/336 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ K G+P ++ M I+P Y LL C+ EA
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEEL 67
Query: 202 LNQMKTLPN-CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ M + PD+ TYSTL+ A + E L +++ R + P+ + V+
Sbjct: 68 VRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASL 127
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K+ + +L M+ + C P + T NT++S + ++M + +K G+ +
Sbjct: 128 CKSARLGEALELLEEMIRAGCC-PTLITFNTLISGCCREKNLEMADSLLQKMAASGVKAD 186
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+N L+ K + ++E M+ Y++ + G E
Sbjct: 187 VVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLE 246
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSV-RLASKLQIAENVSFYNAVISACIKA 439
QM + T+ +++G +G + + ++AS NV Y+ V+ K
Sbjct: 247 QMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKL 306
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
E V + M CRPD T+S + K G
Sbjct: 307 GRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAG 342
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 112/277 (40%), Gaps = 10/277 (3%)
Query: 114 TFSDHVLKKQWFQ-ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE 172
T D + K Q A Q+ E +K P Y + L KSG+ A +V +M +
Sbjct: 192 TLMDGLCKAGRLQEAEQLLERMKASGC-APDVVAYSSFVYGLCKSGKVLDAHQVLEQMRD 250
Query: 173 EGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE 232
+P Y +L C++ ID A + QM + C +V YST++ R +
Sbjct: 251 SHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQ 310
Query: 233 LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ-MERVLSGMLESATCKPDVWTMNT 291
++ + M P+ VT + ++ G KAG ++ +E V +E CKP+ T +
Sbjct: 311 EARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG--CKPNAVTYCS 368
Query: 292 ILSVFANKGQVDMMERWYEKF-----RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
++ + G++ ER E+ P T+N LIG K D +
Sbjct: 369 LVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQR 428
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
MR +Y+ ++E + G A E ++
Sbjct: 429 MRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 121/270 (44%), Gaps = 1/270 (0%)
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
C P+ T++ L+ R E L + M R + PN V+ N +L G K + +
Sbjct: 5 GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEA 64
Query: 270 ERVLSGML-ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
E ++ M+ PD+ T +T+LS + G+V+ ++ + G+ P+ + ++
Sbjct: 65 EELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVV 124
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
+ K + ++E M + T T+N +I + + + ++M A G+K
Sbjct: 125 ASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVK 184
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
AD T+ L++G AG + + A +V Y++ + K+ +++ +V
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQV 244
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
++M++ H P+ T++ + + K G D
Sbjct: 245 LEQMRDSHHDPNVVTYNTILDGLCKSGKID 274
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 165/339 (48%), Gaps = 8/339 (2%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+QP E TY +L ++ KSGQ LA ++ +M E I+ Y+ ++ C++ +D AF
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
N+M+ + + D+ Y+TLI+ A R++ L +DM +R +TP+ V + ++
Sbjct: 268 NLFNEME-IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC 326
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ K G + E + M++ PD T +++ F + Q+D + + G P
Sbjct: 327 FVKEGKLREAEELHKEMIQRGI-SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 385
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT---SSTYNNVIEAFSDMGDAKHME 376
RTFNILI Y K + D +E RK+ + TYN +I+ F ++G + +
Sbjct: 386 NIRTFNILINGYCKANLID---DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
F++M + ++ D ++ L++G + G K + K ++ ++ YN +I
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
A + + ++ + K +PD +T++IM K+G
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKG 541
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 152/355 (42%), Gaps = 6/355 (1%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y+P T+ L+ L G+ A ++ + MVE G +PT AL+ C N + +A
Sbjct: 138 YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAV 197
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+ +++M QP+ TY ++K + + L L + M+ER + + V +I++ G
Sbjct: 198 LLIDRMVE-TGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K G D + + M E K D+ T++ F G+ D + I P
Sbjct: 257 LCKDGSLDNAFNLFNEM-EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITP 315
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ F+ LI + K+ + + + M + + TY ++I+ F +
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML 375
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
+ M ++G + +TF LINGY A L + R S + + YN +I +
Sbjct: 376 DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 435
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY----ALEQEKLQM 490
L + +++ M + RPD ++ I+ + G +K +E+ K+++
Sbjct: 436 GKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL 490
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 157/385 (40%), Gaps = 54/385 (14%)
Query: 137 QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLID 196
Q P TY L+ K Q + A + + MV +G P + L+ YC+ +LID
Sbjct: 345 QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLID 404
Query: 197 EAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIV 256
+ +M +L D TY+TLI+ + + E+ + L+Q+M R V P+ V+ I+
Sbjct: 405 DGLELFRKM-SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKIL 463
Query: 257 LGGYGKAG-------MFDQMER------------VLSGMLESATC--------------- 282
L G G +F+++E+ ++ GM ++
Sbjct: 464 LDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 523
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
KPDV T N ++ KG + + + K G P T+NILI A+ + K +
Sbjct: 524 KPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAK 583
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME--YTFEQMHAEGMKADTKTFCCLING 400
++E +++ F +ST + + M A H +TF + + FC N
Sbjct: 584 LIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTL--------LRPFCLEENA 635
Query: 401 --YANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
Y LF + + NV YN VI + + + ++ V +M E+ C+
Sbjct: 636 SVYDAPTLFKNM-------KAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQ 688
Query: 459 PDSETFSIMTEAYAKEGMNDKVYAL 483
P++ T S K+ ++ L
Sbjct: 689 PNAVTKSTFISGLCKQDLHGSAILL 713
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 137/322 (42%), Gaps = 12/322 (3%)
Query: 163 ARKVFNEMVEEGIEPTPEL--YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
A +F EM P P L ++ L + R D QM+ L ++YT S
Sbjct: 56 AVDLFQEMTRS--RPRPRLIDFSRLFSVVARTKQYDLVLDLCKQME-LKGIAHNLYTLSI 112
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
+I C + L + + + P+TVT + ++ G G + ++ M+E
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
KP + T+N +++ G+V ++ G P T+ ++ K +
Sbjct: 173 H-KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS---GQT 228
Query: 341 SSVMEYMRKLQ---FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
+ ME +RK++ + Y+ +I+ G + F +M +G KAD + L
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
I G+ AG + +R K +I +V ++A+I +K L E E ++K M ++
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 458 RPDSETFSIMTEAYAKEGMNDK 479
PD+ T++ + + + KE DK
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDK 370
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 115/295 (38%), Gaps = 28/295 (9%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ + G+ E+A+++F EMV + P Y LL C N ++A ++
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ + D+ Y+ +I +A + + L+ + + V P+ T NI++GG K G
Sbjct: 484 EK-SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI-------- 317
+ + + M E P+ T N ++ +G + E+ + G
Sbjct: 543 LSEADLLFRKMEEDGH-SPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLR 601
Query: 318 --------------DPETRTFNILIGAYG---KKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+P+ TF L+ + +YD ++ + M+ + + TYN
Sbjct: 602 FALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDA-PTLFKNMKAMGYKPNVVTYN 660
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
VI+ + + +QM G + + T I+G L I +R
Sbjct: 661 TVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLR 715
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 82/207 (39%), Gaps = 6/207 (2%)
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
+P + + + SV A Q D++ ++ GI T +I+I + R S
Sbjct: 69 RPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFS 128
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
M + KL + + T++ +I G ++M G K T L+NG
Sbjct: 129 AMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLC 188
Query: 403 NAGLFHKVISSVRLASKL---QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
G KV +V L ++ N Y V+ K+ + ++M+E+ +
Sbjct: 189 LNG---KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL 245
Query: 460 DSETFSIMTEAYAKEGMNDKVYALEQE 486
D+ +SI+ + K+G D + L E
Sbjct: 246 DAVKYSIIIDGLCKDGSLDNAFNLFNE 272
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 157/348 (45%), Gaps = 2/348 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P ++ L+ L + G+ + A + EM E G+ P +YT ++ +CR L+ EA
Sbjct: 297 PDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRV 356
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
++M C PDV TY+TL+ R E L +M ER V P+ T ++ GY
Sbjct: 357 RDEMVAF-GCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYC 415
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G ++ + + +PD+ T NT++ +G + ++ + I P
Sbjct: 416 RDGNIEKALQFFD-TISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNH 474
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T++ILI ++ +K D + ++ M TYN++I+ + G+ + +
Sbjct: 475 VTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPK 534
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M + + D T+ LI+GY G H+ + +++ + + YN +IS +
Sbjct: 535 MRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGN 594
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ E + VYK+M + PD T+ M + G + K + L E LQ
Sbjct: 595 MQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQ 642
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 122/266 (45%), Gaps = 1/266 (0%)
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
N + + YT + ++ + ++F ++T+ +M++R V P+ VT N+++ +AG +
Sbjct: 154 NSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAA 213
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
++ M+ S KP + T N++L G+ D + G+ P+ R+FN+LIG
Sbjct: 214 MALIDSMV-SKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIG 272
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+ + ++ + MR + +++ +I F+ G+ H +M G+
Sbjct: 273 GFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMP 332
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
D + +I G+ AGL + + +V YN +++ K L + E +
Sbjct: 333 DGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELL 392
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEG 475
MKE+ PD TF+ + Y ++G
Sbjct: 393 NEMKERGVPPDLCTFTTLIHGYCRDG 418
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 2/159 (1%)
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYM-RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
T T NI++ +Y K + ++ +V+ M ++ FP T+N +++A GD +
Sbjct: 159 TYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFP-DVVTHNVMVDARFRAGDVEAAMALI 217
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
+ M ++G+K T+ ++ G G + K R +A +V +N +I +A
Sbjct: 218 DSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRA 277
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+L E R YK M+ + PD +FS + + + G D
Sbjct: 278 GELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMD 316
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 165/339 (48%), Gaps = 8/339 (2%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+QP E TY +L ++ KSGQ LA ++ +M E I+ Y+ ++ C++ +D AF
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
N+M+ + + D+ Y+TLI+ A R++ L +DM +R +TP+ V + ++
Sbjct: 268 NLFNEME-IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC 326
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ K G + E + M++ PD T +++ F + Q+D + + G P
Sbjct: 327 FVKEGKLREAEELHKEMIQRGI-SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 385
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT---SSTYNNVIEAFSDMGDAKHME 376
RTFNILI Y K + D +E RK+ + TYN +I+ F ++G + +
Sbjct: 386 NIRTFNILINGYCKANLID---DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
F++M + ++ D ++ L++G + G K + K ++ ++ YN +I
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
A + + ++ + K +PD +T++IM K+G
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKG 541
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 152/355 (42%), Gaps = 6/355 (1%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y+P T+ L+ L G+ A ++ + MVE G +PT AL+ C N + +A
Sbjct: 138 YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAV 197
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+ +++M QP+ TY ++K + + L L + M+ER + + V +I++ G
Sbjct: 198 LLIDRMVE-TGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K G D + + M E K D+ T++ F G+ D + I P
Sbjct: 257 LCKDGSLDNAFNLFNEM-EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITP 315
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ F+ LI + K+ + + + M + + TY ++I+ F +
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML 375
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
+ M ++G + +TF LINGY A L + R S + + YN +I +
Sbjct: 376 DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 435
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY----ALEQEKLQM 490
L + +++ M + RPD ++ I+ + G +K +E+ K+++
Sbjct: 436 GKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL 490
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 111/257 (43%), Gaps = 2/257 (0%)
Query: 137 QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLID 196
Q P TY L+ K Q + A + + MV +G P + L+ YC+ +LID
Sbjct: 345 QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLID 404
Query: 197 EAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIV 256
+ +M +L D TY+TLI+ + + E+ + L+Q+M R V P+ V+ I+
Sbjct: 405 DGLELFRKM-SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKIL 463
Query: 257 LGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG 316
L G G ++ + +E + + D+ N I+ N +VD + G
Sbjct: 464 LDGLCDNGEPEKALEIFE-KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 317 IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME 376
+ P+ +T+NI+IG KK + + M + TYN +I A GDA
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSA 582
Query: 377 YTFEQMHAEGMKADTKT 393
E++ G D T
Sbjct: 583 KLIEEIKRCGFSVDAST 599
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 137/322 (42%), Gaps = 12/322 (3%)
Query: 163 ARKVFNEMVEEGIEPTPEL--YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
A +F EM P P L ++ L + R D QM+ L ++YT S
Sbjct: 56 AVDLFQEMTRS--RPRPRLIDFSRLFSVVARTKQYDLVLDLCKQME-LKGIAHNLYTLSI 112
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
+I C + L + + + P+TVT + ++ G G + ++ M+E
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
KP + T+N +++ G+V ++ G P T+ ++ K +
Sbjct: 173 H-KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS---GQT 228
Query: 341 SSVMEYMRKLQ---FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
+ ME +RK++ + Y+ +I+ G + F +M +G KAD + L
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
I G+ AG + +R K +I +V ++A+I +K L E E ++K M ++
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 458 RPDSETFSIMTEAYAKEGMNDK 479
PD+ T++ + + + KE DK
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDK 370
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 82/207 (39%), Gaps = 6/207 (2%)
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
+P + + + SV A Q D++ ++ GI T +I+I + R S
Sbjct: 69 RPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFS 128
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
M + KL + + T++ +I G ++M G K T L+NG
Sbjct: 129 AMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLC 188
Query: 403 NAGLFHKVISSVRLASKL---QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
G KV +V L ++ N Y V+ K+ + ++M+E+ +
Sbjct: 189 LNG---KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL 245
Query: 460 DSETFSIMTEAYAKEGMNDKVYALEQE 486
D+ +SI+ + K+G D + L E
Sbjct: 246 DAVKYSIIIDGLCKDGSLDNAFNLFNE 272
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 161/356 (45%), Gaps = 3/356 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F +KE+ +P TY L+ L K + + ARK+ +EM E+G+ P+ Y AL
Sbjct: 317 EALNLFNEMKEKGC-EPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNAL 375
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ YC+ +ID+AF L+ M++ +C P+ TY+ LI + L M ER
Sbjct: 376 IDGYCKEGMIDDAFEILDLMES-NSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERK 434
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
++P+ +T N ++ G K + R+LS M E+ PD WT + + +G+V+
Sbjct: 435 LSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLV-PDQWTYSVFIDTLCKEGRVEEA 493
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++ + G+ + LI Y K D S++E M S TYN +IE
Sbjct: 494 GTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEG 553
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
K +M G+K T+ LI G F + L +
Sbjct: 554 LCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPD 613
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
V Y A + A L E++ V +M E+ PD T++++ + YA+ G+ + +
Sbjct: 614 VCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAF 669
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 157/362 (43%), Gaps = 48/362 (13%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H K A +VF ++ Q Q E +Y L+ L ++G+ A K+F +M E+ P
Sbjct: 239 HCRNKGVDNAYEVF-LIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCP 297
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
T YT L+ A + EA N+MK C+P+V+TY+ LI + + +
Sbjct: 298 TVRTYTVLIYALSGSGRKVEALNLFNEMKE-KGCEPNVHTYTVLIDGLCKENKMDEARKM 356
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
+M E+ + P+ VT N ++ GY K GM D +L ++ES +C P+ T N ++
Sbjct: 357 LSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILD-LMESNSCGPNTRTYNELICGLC 415
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD-----KMSSVMEYMRKLQF 352
K +V K + P T+N LI +G+ ++ D ++ S+M +
Sbjct: 416 KKRKVHKAMALLNKMLERKLSPSLITYNSLI--HGQCKVNDLESAYRLLSLMNENGLVPD 473
Query: 353 PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVIS 412
WT S + I+ G + F+ + A+G+KA+ + LI+GY G
Sbjct: 474 QWTYSVF---IDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVG------- 523
Query: 413 SVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
K+ +A ++ +RM C P+S T++++ E
Sbjct: 524 ------KIDVAYSL----------------------LERMLNDACLPNSYTYNVLIEGLC 555
Query: 473 KE 474
KE
Sbjct: 556 KE 557
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 158/371 (42%), Gaps = 31/371 (8%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P + TY + L K G+ E A +F+ + +G++ +YTAL+ YC+ ID A+
Sbjct: 472 PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSL 531
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L +M C P+ YTY+ LI+ + + +L M V P VT I++G
Sbjct: 532 LERMLN-DACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEML 590
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G FD +V + M+ S +PDV T L + ++G ++ ++ K GI P+
Sbjct: 591 KDGAFDHALKVFNHMV-SLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDL 649
Query: 322 RTFNILIGAYGK----KRMYDKMSSVMEYMRKLQFPWTSSTYNNV--------------I 363
T+ +LI Y + R +D + +++ K S N+ I
Sbjct: 650 VTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGI 709
Query: 364 EAFS-----DMGDA-KHMEY-----TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVIS 412
++ S D+ D K +EY FE+M G D + LI G+ +
Sbjct: 710 DSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQG 769
Query: 413 SVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
V + ++ + YN+++ C K E R+ M E P E++ ++
Sbjct: 770 LVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLY 829
Query: 473 KEGMNDKVYAL 483
EG N+K A+
Sbjct: 830 IEGSNEKAKAV 840
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 145/336 (43%), Gaps = 2/336 (0%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
++P Y +L+ L K + + V+ E++ I P + A++ YC+ + EA
Sbjct: 155 FKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAE 214
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+ +++ PD +TY++LI + ++ M ++ N V+ ++ G
Sbjct: 215 LYASKI-VQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHG 273
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+AG ++ ++ + M E C P V T ++ + G+ + + + G +P
Sbjct: 274 LCEAGRINEALKLFADMTEDNCC-PTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEP 332
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
T+ +LI K+ D+ ++ M + + TYN +I+ + G
Sbjct: 333 NVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEIL 392
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
+ M + +T+T+ LI G HK ++ + + +++ ++ YN++I K
Sbjct: 393 DLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKV 452
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+DL R+ M E PD T+S+ + KEG
Sbjct: 453 NDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEG 488
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 122/294 (41%), Gaps = 21/294 (7%)
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
+P + Y+T++ + + + ++T+Y ++ ++PN T N ++ GY K G + E
Sbjct: 156 KPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAEL 215
Query: 272 VLSGMLESATCKPDVWTMNT-ILSVFANKGQVDMMERWYEKF---------RNFGIDPET 321
S +++ A PD +T + IL NKG ++ YE F RN E
Sbjct: 216 YASKIVQ-AGLHPDTFTYTSLILGHCRNKG----VDNAYEVFLIMPQKGCQRN-----EV 265
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
N++ G R+ + + + P T TY +I A S G F +
Sbjct: 266 SYTNLIHGLCEAGRINEALKLFADMTEDNCCP-TVRTYTVLIYALSGSGRKVEALNLFNE 324
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M +G + + T+ LI+G + + S+ + +V YNA+I K
Sbjct: 325 MKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGM 384
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
+ + + M+ C P++ T++ + K+ K AL + L+ L S
Sbjct: 385 IDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPS 438
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 109/283 (38%), Gaps = 10/283 (3%)
Query: 119 VLKKQWF-QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
+LK F AL+VF + YQP TY L G E V +M EEGI P
Sbjct: 589 MLKDGAFDHALKVFNHMVSLG-YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILP 647
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
YT L+ Y R L AF L M C+P +Y S LIK R +
Sbjct: 648 DLVTYTVLIDGYARLGLTHRAFDFLKCMVD-TGCKPSLYIVSILIKNLSHENRMK----- 701
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
+ E + + ++ + K ++ ++ M+E C DV +++ F
Sbjct: 702 -ETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHG-CTIDVSIYGALIAGFC 759
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+ +++ + + G+ P +N L+ K +Y + +++ M +
Sbjct: 760 QQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLE 819
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+Y ++ G + + F + + G D + LI+G
Sbjct: 820 SYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDG 862
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 173/371 (46%), Gaps = 4/371 (1%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLV-LLGKSGQPELARKVFNEMVEEGIEPTP 179
+ +W +ALQ +E + +Q + + +++ LG+ G+ E+A VFN + G
Sbjct: 176 RGEWERALQGYEWMVQQVHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQKAGFGNNV 235
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV-DAMRFELIETLY 238
Y+A+++AY R+ EA MK C+P++ TY+T+I AC + + ++
Sbjct: 236 YAYSAMVSAYGRSGRCREALKVFQAMKK-AGCKPNLITYNTIIDACGKGGVDLKQALDIF 294
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
+M + V P+ +T N ++ + G+++ +RV + M + + D++T NT++
Sbjct: 295 DEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEM-QRRGIEQDIFTFNTLIDAVCK 353
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
GQ+++ R I P T++ +I YGK +++ S+ M++ +
Sbjct: 354 GGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVS 413
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN +I+ ++ +G + M G+KAD T+ LI+ Y G +
Sbjct: 414 YNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMK 473
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ NV Y+A+I + KA ++ V+ K +PD +S + ++ K G+ +
Sbjct: 474 GEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVE 533
Query: 479 KVYALEQEKLQ 489
L QE Q
Sbjct: 534 DAVVLLQEMTQ 544
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 163/328 (49%), Gaps = 4/328 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSG-QPELARKVFNEMVEEGIEPTPELYTA 184
+AL+VF+ +K+ +P TY ++ GK G + A +F+EM +EG+EP + +
Sbjct: 253 EALKVFQAMKKAGC-KPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNS 311
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+A R L +++ +M+ + D++T++TLI A + EL ++ M +
Sbjct: 312 LIAVCSRGGLWEDSQRVFAEMQR-RGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGK 370
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+++PN VT + ++ GYGK G F++ + M ES +PD + NT++ ++A G+ D
Sbjct: 371 NISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGV-RPDRVSYNTLIDIYAKLGRFDD 429
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ G+ + T+N LI AYGK+ Y + + + M+ TY+ +I+
Sbjct: 430 ALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALID 489
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
++S G + + F + G+K D + LI+ GL + ++ ++ I
Sbjct: 490 SYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQP 549
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRM 452
N+ YN++I A + ++E V M
Sbjct: 550 NIVTYNSLIDAYGRYGQADKLEAVKANM 577
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 10/210 (4%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ GK G+ + A +F++M EG+ P Y+AL+ +Y + + + +
Sbjct: 448 TYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEF 507
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
K +PDV YS+LI +C E L Q+M + + PN VT N ++ YG+ G
Sbjct: 508 KR-AGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQ 566
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTIL-------SVFANKGQVDMMERWYEKFRNFGID 318
D++E V + M S K +M + + + G + + ++E + FG+
Sbjct: 567 ADKLEAVKANMPNSVQ-KIGERSMEVVRKPPPSQQNASDHTGVLAAVSVFHE-MQQFGLK 624
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
P TF+ ++ A + + S ++E MR
Sbjct: 625 PNVVTFSAILNACSRCASLQEASVLLEQMR 654
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 180/398 (45%), Gaps = 37/398 (9%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLV-LLGKSGQPELARKVFNEMVEEGIEPTP 179
+ +W +ALQ +E + +Q + + +++ LG+ G+ E+A VFN + G
Sbjct: 175 RGEWERALQGYEWMVQQGHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQKAGFGNNV 234
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV-DAMRFELIETLY 238
Y+A+++AY R+ EA MK C+P++ TY+T+I AC + + ++
Sbjct: 235 YAYSAMVSAYGRSGRCREALKVFQAMKK-AGCKPNLITYNTIIDACGKGGVDLKKALDIF 293
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM--------------LESATCK- 283
++M + V P+ +T N ++ + +++ +RV + M L A CK
Sbjct: 294 EEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKG 353
Query: 284 -------------------PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
P+V T +T++ + G + Y + G+ P+ ++
Sbjct: 354 GQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSY 413
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
N LI Y K +D + + M ++ TYN +I+A+ G K F++M A
Sbjct: 414 NTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKA 473
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
EG+ + T+ LI+ Y+ AG+ S + + +V Y+++I +C K + +
Sbjct: 474 EGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVED 533
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
+ + M + +P+ T++ + +AY + G D V A
Sbjct: 534 AVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEA 571
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 123/274 (44%), Gaps = 24/274 (8%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ GK G+ + A +F++M EG+ P Y+AL+ AY + + +A +
Sbjct: 447 TYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEF 506
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
K +PDV YS+LI +C E L Q+M + + PN VT N ++ YG+ G
Sbjct: 507 KR-AGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQ 565
Query: 266 FDQME--------RVLSGMLESAT---CKPDVWTMNTILSVFANKGQVDMMERWYEKFRN 314
D +E V + + + +T CK T+ + + + G + + ++E +
Sbjct: 566 VDNVEAAKGNMPINVFNKVGDRSTEIICK----TLTSQQNANDHTGVLAAVSVFHE-MQQ 620
Query: 315 FGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKH 374
FG+ P TF+ ++ A + + S ++E MR W + ++ MG +H
Sbjct: 621 FGLKPNVVTFSAILNACSRCSSLQEASVLLEQMRFFD-SWVYGIAHGLL-----MGLREH 674
Query: 375 MEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
+ +++ E + D T N + L+H
Sbjct: 675 VWVEAQRLFDEIARMDYATGAAFYNALTDV-LWH 707
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 102/229 (44%), Gaps = 13/229 (5%)
Query: 264 GMFDQMERVLSG---MLESATCKPDVWT--MNTILSVFANKGQVDMMERWYEKFRNFGID 318
G + ER L G M++ + + W+ + ++S G+V++ + + + G
Sbjct: 173 GNRGEWERALQGYEWMVQQGHLRSE-WSKLASIMISTLGRLGKVEIALDVFNRAQKAGFG 231
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG-DAKHMEY 377
++ ++ AYG+ + V + M+K TYN +I+A G D K
Sbjct: 232 NNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALD 291
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVIS 434
FE+M EG++ D TF LI + L+ S R+ +++Q I +++ YN +I
Sbjct: 292 IFEEMQKEGVEPDRITFNSLIAVCSRGSLWE---DSQRVFAEMQRRGIEQDIFTYNTLID 348
Query: 435 ACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
A K + + M+ K+ P+ T+S M + Y K G ++ L
Sbjct: 349 AVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGL 397
>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
Length = 425
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 155/333 (46%), Gaps = 2/333 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY ++ L K+G LA ++ ++M++ G+EP L +L + +++DEA
Sbjct: 46 KPNAYTYKCVIQSLVKAGNVVLAMELLDKMIKTGLEPDTLLCNVVLDGLGKANMMDEACK 105
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
MK++ C D YTY+ LI++ R E L+ +M+ER TP+ V+ Y
Sbjct: 106 LFASMKSM-GCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIY 164
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
KAG + VL ML+ PD +T+N++++ + G+ ++ +E+ + G+
Sbjct: 165 CKAGRIESAMVVLKKMLDK-NLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVN 223
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T +FN ++ GK M+ M S T+N +I A +
Sbjct: 224 TVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQ 283
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M + G+ D T+ C+I +A AG K K + NV YN +I A +KA
Sbjct: 284 EMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAG 343
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ +Y MK+K PD+ T +++ + K
Sbjct: 344 RYQDARDIYFDMKKKGILPDAITATVLQQLAGK 376
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 141/318 (44%), Gaps = 13/318 (4%)
Query: 174 GIEPTPELY-----TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
I+ TP Y A++AAY R+S I + ++ + +P+ YTY +I++ V A
Sbjct: 4 AIQDTPCRYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGS-KPNAYTYKCVIQSLVKA 62
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
L L M + + P+T+ N+VL G GKA M D+ ++ + M +S C D +T
Sbjct: 63 GNVVLAMELLDKMIKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASM-KSMGCPADDYT 121
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
++ + + +++ G P + +I Y K + V++ M
Sbjct: 122 YAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKML 181
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
T N++I A S G + FE+M G+ +T +F +++ AG
Sbjct: 182 DKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAG--- 238
Query: 409 KVISSVRLASKLQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
KV + + +++ I N +N +I+ +A E +V + M+ PD T++
Sbjct: 239 KVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYT 298
Query: 466 IMTEAYAKEGMNDKVYAL 483
M EA+AK G K + +
Sbjct: 299 CMIEAFAKAGNMGKAFEM 316
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 112/276 (40%), Gaps = 1/276 (0%)
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
C+ V + +I A + R + +Q++D+ PN T V+ KAG
Sbjct: 10 CRYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAM 69
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
+L M+++ +PD N +L +D + + ++ G + T+ ILI +
Sbjct: 70 ELLDKMIKTGL-EPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRS 128
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
G+ + ++ + + + M + ++ Y NVI+ + G + ++M + + D
Sbjct: 129 LGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPD 188
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
T LI + G K +A N +NA++ C KA + +
Sbjct: 189 DYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMD 248
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
M+ + +P+S TF+ + + + Y + QE
Sbjct: 249 EMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQE 284
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 182/425 (42%), Gaps = 40/425 (9%)
Query: 83 GYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVL---------------------- 120
G+R RT +K + K RKAK W V + F+D +L
Sbjct: 132 GWRQSRTRVKKMNKLALRKAKD--WRERV-KYFTDRILGLKQDQFVADVLDDRKVQMTPT 188
Query: 121 ----------KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEM 170
++ W +A +V+E L + +Y P +L +LGK+ Q LA +VF
Sbjct: 189 DFCFVVKSVGQESWHRAFEVYEWLNLRHWYSPNARMLSTILAVLGKANQEPLAVEVFTR- 247
Query: 171 VEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA-- 228
E +E T ++Y A++ Y R+ ++ + M+ C+PD+ +++TLI A + A
Sbjct: 248 AEPSVENTVKVYNAMMGVYARSGKFNKVQELFDLMRE-RGCEPDLVSFNTLINARLKAGE 306
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
M L L ++ + P+ +T N ++ +A ++ V M+ + C+PD+WT
Sbjct: 307 MTPNLAIELLTEVRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMV-AHHCEPDLWT 365
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
N ++SV+ G E+ + + G P+ ++N + A+ ++ +K+ + E M
Sbjct: 366 YNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMV 425
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
K+ F TYN +I + G + M + G D T+ LI+
Sbjct: 426 KIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIE 485
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ + + + Y+A+I KA +E E + M RPD +S+M
Sbjct: 486 EAAGMMSEMLNTGVKPTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVML 545
Query: 469 EAYAK 473
+ + +
Sbjct: 546 DIHLR 550
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 145/332 (43%), Gaps = 3/332 (0%)
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
SG E AR VFN M+++G PT + LL A + ++E +V + +++ + +
Sbjct: 828 SGCYERARAVFNTMMKDGPSPTVDSINGLLQALIVDGRLEELYVVVQELQDI-GFKISKS 886
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
+ ++ A A ++ +Y M P+ ++ + +E +LS M
Sbjct: 887 SILLMLDAFARAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEM 946
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
E A KPD+ N++L ++ + Y++ + G++P+ T+NILI Y +
Sbjct: 947 -EEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHR 1005
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
+ +M+ MR + TY +++ +F + E FE++ + G K D +
Sbjct: 1006 PKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHI 1065
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
++ Y N+G K + + ++ + ++ + + E E+V +KE
Sbjct: 1066 MMKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETD 1125
Query: 457 CRPDSETFSIMTEAYAKEG-MNDKVYALEQEK 487
+ +S + +AY + G N + L+Q K
Sbjct: 1126 ANLSTLPYSSVIDAYVRNGDYNAGIQKLKQVK 1157
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 104/234 (44%), Gaps = 37/234 (15%)
Query: 165 KVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
+++ + E+G+EP + Y L+ YCR+ E V +++M+T+ +P + TY +L+ +
Sbjct: 976 QIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTV-GLEPKLDTYKSLVAS 1034
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
+GK + +Q E + L+S CK
Sbjct: 1035 -----------------------------------FGKQQLVEQAEELFEE-LQSTGCKL 1058
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
D + ++ ++ N G +R + ++ G++P T ++L+ +YG + V+
Sbjct: 1059 DRSFYHIMMKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVL 1118
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+++ ++ Y++VI+A+ GD +Q+ EG++ D + + C I
Sbjct: 1119 SNLKETDANLSTLPYSSVIDAYVRNGDYNAGIQKLKQVKEEGLEPDHRIWTCFI 1172
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/312 (16%), Positives = 129/312 (41%), Gaps = 36/312 (11%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A +VF++M GI+ + LY +++ YC+ + A ++ +T ++ Y +I
Sbjct: 728 ASQVFSDMRFCGIKASECLYQSMMLLYCKMGFPETAHHLIDLTETDGTVLNNISVYVDVI 787
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
+A ++ E++ +M + +T N N ++ Y +G +++ V + M++
Sbjct: 788 EAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAVFNTMMKDGP- 846
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
P V ++N +L G+++ + ++ ++ G + +++ A+ + ++
Sbjct: 847 SPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARAGNIFEVKK 906
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+ M+ + + Y + + + +E +M G K D
Sbjct: 907 IYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPD------------ 954
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
+S +N+V+ + DD + ++Y+R+KE PD +
Sbjct: 955 -----------------------LSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDED 991
Query: 463 TFSIMTEAYAKE 474
T++I+ Y ++
Sbjct: 992 TYNILIVMYCRD 1003
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 8/134 (5%)
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-----LFHK 409
T YN ++ ++ G ++ F+ M G + D +F LIN AG L +
Sbjct: 255 TVKVYNAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINARLKAGEMTPNLAIE 314
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+++ VR + + ++ YN +ISAC +A +L E V+ M HC PD T++ M
Sbjct: 315 LLTEVRRSG---LRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMIS 371
Query: 470 AYAKEGMNDKVYAL 483
Y + G++ K L
Sbjct: 372 VYGRCGLSGKAEQL 385
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 103/235 (43%), Gaps = 6/235 (2%)
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
+PN + +L GKA V + S V+ N ++ V+A G+ + ++
Sbjct: 219 SPNARMLSTILAVLGKANQEPLAVEVFTRAEPSVENTVKVY--NAMMGVYARSGKFNKVQ 276
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKK-RMYDKMS-SVMEYMRKLQFPWTSSTYNNVIE 364
++ R G +P+ +FN LI A K M ++ ++ +R+ TYN +I
Sbjct: 277 ELFDLMRERGCEPDLVSFNTLINARLKAGEMTPNLAIELLTEVRRSGLRPDIITYNTLIS 336
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR-LASKLQIA 423
A S + + F+ M A + D T+ +I+ Y GL K L S+
Sbjct: 337 ACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFP 396
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ VS YN+ + A + ++ +++ + + M + D T++ M Y K+G ND
Sbjct: 397 DAVS-YNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQND 450
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/397 (18%), Positives = 148/397 (37%), Gaps = 53/397 (13%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P + Y +L + + +P+ A + EM+ +GI P LY +L + +++
Sbjct: 535 RPDQLAYSVMLDIHLRFNEPKRAMTFYKEMIHDGIMPEHSLYELMLRTLGNANKVEDIGR 594
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP--NTVTQNIVLG 258
+ M+ + P +Y + C D E + L + + +R N ++
Sbjct: 595 VVRDMEEVCGMNPQAISYILVKGDCYD----EAAKMLRRAISDRYEIDRENLLSILSSYS 650
Query: 259 GYGKAGM-FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
G+ + D +E +L+ T + ++ + Q+D + Y R G
Sbjct: 651 SSGRHSVALDLLE-----LLKEHTPRSSQMITEALVVMLCKAQQLDTALKEYSNSRELGF 705
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMR-------------------KLQFPWTS-- 356
F LI + ++ + S V MR K+ FP T+
Sbjct: 706 TGSFTMFEALIQCCLENELFTEASQVFSDMRFCGIKASECLYQSMMLLYCKMGFPETAHH 765
Query: 357 ---------------STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
S Y +VIEA+ + + E M + + K + LI Y
Sbjct: 766 LIDLTETDGTVLNNISVYVDVIEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAY 825
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
A +G + + + K + V N ++ A I L E+ V + +++ +
Sbjct: 826 AASGCYERARAVFNTMMKDGPSPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISK 885
Query: 462 ETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGHW 498
+ +M +A+A+ G E +K+ ++A+G++
Sbjct: 886 SSILLMLDAFARAG-----NIFEVKKIYHGMKAAGYF 917
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 176/432 (40%), Gaps = 78/432 (18%)
Query: 129 QVFEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+ + +LKE + P TY ++ + + + A K+F +MVE G P Y LL
Sbjct: 179 RAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLL 238
Query: 187 AAYCRNSLIDEAFVTLNQMK------------TL----------------------PNCQ 212
+ CRN L+DEA+ L++M+ TL +C
Sbjct: 239 SGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCP 298
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
PDV YSTLI A R + L++ M E S P+ VT ++ G K + ++V
Sbjct: 299 PDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQV 358
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
L M E C P+V T ++++ GQV + +++ GI+P T+N LI +
Sbjct: 359 LETM-EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFC 417
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
D +ME M TYN +I+ G A F M A+ D
Sbjct: 418 MTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVI 477
Query: 393 TFCCLIN-----------------------------------GYANAGLFHKVISSVRLA 417
T+ CLI GY NAGL V + RL
Sbjct: 478 TYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGL---VDDAERLL 534
Query: 418 SKLQIAE---NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
++ ++ +V Y +++ K ++E RV KRM ++ C+P+ T++ + +A+ +
Sbjct: 535 EEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRA 594
Query: 475 GMNDKVYALEQE 486
G Y L +E
Sbjct: 595 GKPTVAYRLLEE 606
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 182/418 (43%), Gaps = 57/418 (13%)
Query: 117 DHVLKKQWFQ-ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
D + K Q A QV E ++++ P TY L+ L K+GQ A++VF M+ GI
Sbjct: 344 DGLCKGDRLQEAQQVLETMEDRNC-TPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGI 402
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMK---TLPN---------------------- 210
EP Y +L+ +C + +D A + + +M LP+
Sbjct: 403 EPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANR 462
Query: 211 ---------CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
C PDV TYS LI R ++ TL+ DM +++V P+ VT + ++ GY
Sbjct: 463 LFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYC 522
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
AG+ D ER+L M+ S C PDV+T +++ F G++ R ++ G P
Sbjct: 523 NAGLVDDAERLLEEMVAS-DCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNV 581
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+ LI A+ + ++E M TY ++I F GD + E+
Sbjct: 582 VTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILER 641
Query: 382 M-HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV---------SFYNA 431
+ E KAD + +++G G R+++ L++ E + Y A
Sbjct: 642 LERDENCKADMFAYRVMMDGLCRTG---------RMSAALELLEAIKQSGTPPRHDIYVA 692
Query: 432 VISACIKADDLMEMERVYKRMK-EKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
+I + +L + V + M + RP++E + + + A+EG +++ AL E L
Sbjct: 693 LIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELL 750
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 146/333 (43%), Gaps = 4/333 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E TY L+ K + A + EM E G+ P Y+ ++ +CR + +D A+
Sbjct: 159 PNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKL 218
Query: 202 LNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
QM C P++ TY+TL+ C + + E E L +M ER + P+ + + ++ G
Sbjct: 219 FRQM-VENGCMPNLVTYNTLLSGLCRNGLMDEAYE-LLDEMRERGLQPDKFSYDTLMAGL 276
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G D +V + C PDV +T+++ G++D + +EK R +P+
Sbjct: 277 CKTGKIDMALKVFEDN-SNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPD 335
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
TF L+ K + V+E M TY+++I+ G + + F+
Sbjct: 336 VVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFK 395
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M G++ + T+ LI+G+ + + + ++ YN +I K
Sbjct: 396 RMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTG 455
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
E R++ MK K C PD T+S + + K
Sbjct: 456 RAPEANRLFGDMKAKFCNPDVITYSCLIGGFCK 488
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 146/358 (40%), Gaps = 17/358 (4%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H+LK W P P TY ++ L KSG + A ++ EM E G P
Sbjct: 45 HILKNGW------------PPGITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVP 92
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
+Y ++ A C+ +A M+ C+ +V T++ +I A R T
Sbjct: 93 DAAIYNFVIHALCKARNTAKALDYFRSME----CEKNVITWTIMIDGLCKANRLPEATTY 148
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
+ M ++ PN T N+++ G+ K + +L M ES P+V T +T++ F
Sbjct: 149 FAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGL-APNVVTYSTVIHGFC 207
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+ +VD + + + G P T+N L+ + + D+ +++ MR+
Sbjct: 208 RQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKF 267
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
+Y+ ++ G FE D + LI G AG +
Sbjct: 268 SYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKM 327
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ +V + A++ K D L E ++V + M++++C P+ T+S + + K G
Sbjct: 328 RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTG 385
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 135/353 (38%), Gaps = 45/353 (12%)
Query: 159 QPELARKVFN-EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKT--LPNCQPDV 215
P+ A + F+ ++G + Y L A R IDE T + +K P P+V
Sbjct: 3 DPDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDE---TCHILKNGWPPGITPNV 59
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
+TY+ +I+ + + L ++M E P+ N V+ KA + L
Sbjct: 60 FTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKA---RNTAKALD- 115
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
S C+ +V T ++ ++ ++ K + G P T+N+LI + K
Sbjct: 116 YFRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVH 175
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
+ +++ M++ TY+ VI F F QM G + T+
Sbjct: 176 KVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYN 235
Query: 396 CLINGYANAGL----------------------FHKVISSVRLASKLQIA---------- 423
L++G GL + +++ + K+ +A
Sbjct: 236 TLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNG 295
Query: 424 ---ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+V Y+ +I+ KA L E +++++M+E C PD TF+ + + K
Sbjct: 296 DCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCK 348
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 83/206 (40%), Gaps = 5/206 (2%)
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
+V+T N + ++D + GI P T+ ++I K DK ++
Sbjct: 23 NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGD-AKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
E MR+ ++ YN VI A + AK ++Y F M E + T+ +I+G
Sbjct: 83 EEMRESGPVPDAAIYNFVIHALCKARNTAKALDY-FRSMECE---KNVITWTIMIDGLCK 138
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
A + + K N YN +I+ K + + K MKE P+ T
Sbjct: 139 ANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVT 198
Query: 464 FSIMTEAYAKEGMNDKVYALEQEKLQ 489
+S + + ++ D Y L ++ ++
Sbjct: 199 YSTVIHGFCRQTKVDTAYKLFRQMVE 224
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 67/171 (39%), Gaps = 3/171 (1%)
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G D T+N L A + R D+ +++ TY VI+ GD
Sbjct: 19 GFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKA 78
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
E+M G D + +I+ A K + R ++ +NV + +I
Sbjct: 79 CELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFR---SMECEKNVITWTIMIDG 135
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
KA+ L E + +MK+K P+ T++++ + K + Y L +E
Sbjct: 136 LCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKE 186
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 156/311 (50%), Gaps = 4/311 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQP-ELARKVFNEMVEEGIEPTPELYTA 184
+A++VFE +K +P TY ++ GK G A ++F+EM+ G++P + +
Sbjct: 238 EAIKVFETMKSSGL-KPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNS 296
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
LLA R L + A ++M + D++TY+TL+ A + +L + +M +
Sbjct: 297 LLAVCGRGGLWEAARNLFSEM-LYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRK 355
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ PN VT + V+ GY KAG D+ + + M + A+ D + NT+LS++A G+ +
Sbjct: 356 HIMPNVVTYSTVIDGYAKAGRLDEALNLFNEM-KFASIGLDRVSYNTLLSIYAKLGRFEE 414
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
++ + GI + T+N L+G YGK+ Y+++ V E M+ + TY+ +I+
Sbjct: 415 ALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLID 474
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
+S G + F + G+KAD + LI+ GL +S + +K I
Sbjct: 475 VYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRP 534
Query: 425 NVSFYNAVISA 435
NV YN++I A
Sbjct: 535 NVVTYNSIIDA 545
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 170/368 (46%), Gaps = 4/368 (1%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLV-LLGKSGQPELARKVFNEMVEEGIEPTP 179
+ +W +A++ FE + + ++G ++ +LG+ GQ ELA+ VF + EG T
Sbjct: 161 RGEWAKAIRCFEFAVRREQRRNEQGKLASAMISILGRLGQVELAKNVFETALNEGYGNTV 220
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV-DAMRFELIETLY 238
++AL++AY R+ DEA MK+ +P++ TY+ +I AC + F ++
Sbjct: 221 YAFSALISAYGRSGYCDEAIKVFETMKS-SGLKPNLVTYNAVIDACGKGGVDFNRAAEIF 279
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
+M V P+ +T N +L G+ G+++ + S ML + D++T NT+L
Sbjct: 280 DEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGI-EQDIFTYNTLLDAVCK 338
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
GQ+D+ + + I P T++ +I Y K D+ ++ M+ +
Sbjct: 339 GGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVS 398
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN ++ ++ +G + ++M + G+K D T+ L+ GY G + +V
Sbjct: 399 YNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMK 458
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+I N+ Y+ +I K E V++ K+ + D +S + +A K G+ +
Sbjct: 459 AERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVE 518
Query: 479 KVYALEQE 486
+ E
Sbjct: 519 SAVSFLDE 526
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 131/284 (46%), Gaps = 40/284 (14%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+A ++F EML+ QP T+ LL + G+ G E AR +F+EM+ GIE Y
Sbjct: 274 RAAEIFDEMLRNG--VQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNT 331
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMR-------------- 230
LL A C+ +D AF +++M + P+V TYST+I A R
Sbjct: 332 LLDAVCKGGQMDLAFQIMSEMPR-KHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFA 390
Query: 231 ---------------------FELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
FE + ++M+ + + VT N +LGGYGK G ++++
Sbjct: 391 SIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEV 450
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+RV M ++ P++ T +T++ V++ G + +F+ G+ + ++ LI
Sbjct: 451 KRVFEEM-KAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALID 509
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
A K + + S ++ M K TYN++I+AF G A+
Sbjct: 510 ALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAE 553
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 161/340 (47%), Gaps = 5/340 (1%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL L K G+ E A ++ + E G+ +Y + YCR +++A +T+ +M++
Sbjct: 357 LLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESF- 415
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+P+ T+++LI D + E + M E+ VTP+ T N ++ GYGK FD+
Sbjct: 416 GLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRC 475
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI- 328
++L M E KP+V + ++++ G++ E G+ P + +N+LI
Sbjct: 476 FQILEQM-EEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLID 534
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
G+ ++ D + E MR P T TYN +I+ G E Q+ + G
Sbjct: 535 GSCMVGKVKDALRFFDEMMRSEISP-TLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHS 593
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
D T+ LI+GYANAG K + L I V Y+ +IS C K + + +E++
Sbjct: 594 PDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSK-EGIELVEKL 652
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
Y M + + PD ++ M YA+ G K Y+L Q L
Sbjct: 653 YNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGML 692
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 152/375 (40%), Gaps = 41/375 (10%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ K G+ + A K+ M E+ + P + +LL+ C+ + EA L +M
Sbjct: 248 TYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEM 307
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ + PD YTYS L + LY+ E+ + N T +I+L G K G
Sbjct: 308 E-VNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGK 366
Query: 266 FDQMERVL-----SGM-----------------------------LESATCKPDVWTMNT 291
++ E +L +G+ +ES +P+ T N+
Sbjct: 367 VEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNS 426
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
++ F + ++D E W +K G+ P T+N LI YGK +D+ ++E M ++
Sbjct: 427 LIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIG 486
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
+Y ++I G E M G+ + + + LI+G G KV
Sbjct: 487 VKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVG---KVK 543
Query: 412 SSVRLASKL---QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
++R ++ +I+ + YN +I K L E E ++ PD T++ +
Sbjct: 544 DALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLI 603
Query: 469 EAYAKEGMNDKVYAL 483
YA G K L
Sbjct: 604 SGYANAGNVSKCLGL 618
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 147/375 (39%), Gaps = 53/375 (14%)
Query: 119 VLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPT 178
V +KQ+ + + +F M E ++ Y K + K ++ + + M + G+ P
Sbjct: 152 VNEKQFVKVVDLF-MEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPN 210
Query: 179 PELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
+Y L+ CR I +A ++M + N + TY+TLI + +
Sbjct: 211 VFIYNVLIGGLCREKRIRDAEKMFDEMCNI-NLVGSIVTYNTLIDGYCKVGELDAAFKMR 269
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT----MNTILS 294
+ M E+SV PN +T N +L G K + +L M E PD +T + +L
Sbjct: 270 ERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEM-EVNGFMPDGYTYSILFDGLLR 328
Query: 295 VFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 354
G +++ E+ EK GI T +IL+ K+
Sbjct: 329 CDDGNGAMELYEQATEK----GIRINNYTGSILLNGLCKQ-------------------- 364
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
G + E ++ G+ AD + +NGY G +K I ++
Sbjct: 365 ---------------GKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTI 409
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERV---YKRMKEKHCRPDSETFSIMTEAY 471
+ N +N++I K D+ EM++ K+M EK P ET++ + + Y
Sbjct: 410 ERMESFGLRPNSITFNSLID---KFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGY 466
Query: 472 AKEGMNDKVY-ALEQ 485
K D+ + LEQ
Sbjct: 467 GKLCTFDRCFQILEQ 481
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 98/214 (45%), Gaps = 3/214 (1%)
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
G+ + A + F+EM+ I PT Y L+ C+ + EA L Q+ T PDV T
Sbjct: 540 GKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQI-TSSGHSPDVIT 598
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y++LI +A LY+ M + P T + ++ G K G+ + +E++ + ML
Sbjct: 599 YNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGI-ELVEKLYNEML 657
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
+ PD N ++ +A G ++ + GI P+ T+N LI + ++
Sbjct: 658 Q-MNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKL 716
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
+ ++ M+ + + TY+ +++ D+ D
Sbjct: 717 SNIKDLVNNMKAKELAPKADTYDILVKGHCDLKD 750
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 1/135 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P Y ++ + G + A + M+++GI P Y +L+ + R +
Sbjct: 663 PDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDL 722
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+N MK P TY L+K D F Y++M E + PN N + G
Sbjct: 723 VNNMKA-KELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLE 781
Query: 262 KAGMFDQMERVLSGM 276
+ G +++ + S M
Sbjct: 782 QEGRLQEVQVICSEM 796
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 157/340 (46%), Gaps = 2/340 (0%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL L K G+ +A +V +V G+ PT +Y L+ YC+ ++ AF T QMK+
Sbjct: 342 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS-R 400
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+ +PD TY+ LI A R + L +M + V P T N ++ YG+ G ++
Sbjct: 401 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKC 460
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
VLS M E+ KP+V + +I++ F G++ + + + P + +N +I
Sbjct: 461 FIVLSEMQENGL-KPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIID 519
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
AY + D+ ++E M+ + TYN +I+ + E + +
Sbjct: 520 AYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 579
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
D ++ LI+ G K + + K I V Y+ +IS A L+EME +Y
Sbjct: 580 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLY 639
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
++M + + P + +IM EAY+K G K L +E LQ
Sbjct: 640 QKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 679
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 141/342 (41%), Gaps = 2/342 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P +Y ++ + ++G+ A +VF+EM E + P Y ++ + + ++ F
Sbjct: 194 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSL 253
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+QM +P+ TY+ L+ A R L +M + + P+ T +I+ G
Sbjct: 254 RDQM-VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 312
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G M + L++ D +T + +L+ G+V + E + N G+ P
Sbjct: 313 RNGDSKAMLSLFGKSLKNGVTIGD-YTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 371
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+N LI Y + + S M+ TYN +I + + +
Sbjct: 372 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 431
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G+ +TF LI+ Y G K + + + NV Y ++++A K
Sbjct: 432 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 491
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ E + M K P+++ ++ + +AY + G ND+ + L
Sbjct: 492 IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFIL 533
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/398 (20%), Positives = 155/398 (38%), Gaps = 44/398 (11%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
A++VF+ + E+ P TY ++ K G E + ++MV G++P Y L
Sbjct: 214 DAVEVFDEMTERAVL-PNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVL 272
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA--------------------- 224
L+ CR + E L++M + PD +TYS L
Sbjct: 273 LSGLCRAGRMGETSALLDEMAS-QKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNG 331
Query: 225 ---------------CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
C D + + E + Q + + P V N ++ GY + G ++
Sbjct: 332 VTIGDYTCSILLNGLCKDG-KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTG---EL 387
Query: 270 ERVLS--GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
E S G ++S KPD T N +++ ++ + + ++ G++P TFN L
Sbjct: 388 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 447
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
I AYG+ +K V+ M++ +Y +++ AF G + M + +
Sbjct: 448 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 507
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
+ + + +I+ Y G + V I+ ++ YN +I + E E
Sbjct: 508 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 567
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
+ + PD+ +++ + A G DK L+Q
Sbjct: 568 IINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQ 605
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 136/338 (40%), Gaps = 19/338 (5%)
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
G+ R+ F + G P + + A + EA L +M P+ ++
Sbjct: 139 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 198
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------MFDQME 270
Y+ +I A R ++ +M ER+V PN +T N ++ G+ K G + DQM
Sbjct: 199 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQM- 257
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
V G+ KP+ T N +LS G++ ++ + + P+ T++IL
Sbjct: 258 -VCHGL------KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFD- 309
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN--VIEAFSDMGDAKHMEYTFEQMHAEGMK 388
G R D + + + + L+ T Y ++ G E + + G+
Sbjct: 310 -GLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLV 368
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
+ LINGY G S+ I + YNA+I+ KA+ + + +
Sbjct: 369 PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDL 428
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
M++ P ETF+ + +AY + G +K + + E
Sbjct: 429 LMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSE 466
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 89/225 (39%), Gaps = 2/225 (0%)
Query: 267 DQMERVLSGMLESATCK-PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D R+LS + + A P + + N +L + G+ + R + + G P+T +N
Sbjct: 105 DGALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWN 164
Query: 326 ILIGA-YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
+ A + + + + R P + +YN VI G F++M
Sbjct: 165 KAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTE 224
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
+ + T+ +I+G+ G S + N YN ++S +A + E
Sbjct: 225 RAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGE 284
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ M + PD T+SI+ + ++ G + + +L + L+
Sbjct: 285 TSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLK 329
>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 171/363 (47%), Gaps = 3/363 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A +FE +++ +P+ Y LL K+G + A V +EM G+ P + Y+ L
Sbjct: 323 EAEAIFEEMRDNGL-KPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFL 381
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ AY + A + L +M+ N QP+ Y +S ++ + D ++ + ++M+
Sbjct: 382 IDAYGNAGRWESARIVLKEMEA-SNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSG 440
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
V P+ V N+++ +GK D ML S +PD T NT++ G+ D
Sbjct: 441 VRPDRVFYNVMIDTFGKFNCLDHAMATFDRML-SEGIEPDTVTWNTLIDCHCRAGKHDRA 499
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E +E+ G P TFNI+I ++G + +D + +++ +MR S TY +I+
Sbjct: 500 EELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDI 559
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ G + M A G+K + + LIN YA GL + +S+ R + +
Sbjct: 560 YGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSAFRAMRVDGLKPS 619
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
+ N++I+A + E V + MKE +PD T++ + +A + DKV ++ +
Sbjct: 620 LLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPSVYE 679
Query: 486 EKL 488
E +
Sbjct: 680 EMI 682
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 154/341 (45%), Gaps = 14/341 (4%)
Query: 136 EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI 195
E+ P E TY L+ G +G+ E AR V EM ++P +++ +L++Y
Sbjct: 367 ERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEW 426
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIKA-----CVD-AMRFELIETLYQDMDERSVTPN 249
++F L +M+ +PD Y+ +I C+D AM + M + P+
Sbjct: 427 QKSFQVLREMEN-SGVRPDRVFYNVMIDTFGKFNCLDHAM------ATFDRMLSEGIEPD 479
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
TVT N ++ + +AG D+ E + M+E P T N +++ F ++ + D ++
Sbjct: 480 TVTWNTLIDCHCRAGKHDRAEELFEEMMEGGY-SPCNTTFNIMINSFGDQERWDDVKNLL 538
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
R+ G+ P + T+ LI YGK ++ ++ M+ +S+ YN +I A++
Sbjct: 539 AHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQR 598
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFY 429
G ++ F M +G+K LIN + + + ++ + + +V Y
Sbjct: 599 GLSEQAVSAFRAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTY 658
Query: 430 NAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
++ A I+ + ++ VY+ M C PD + +++ A
Sbjct: 659 TTLMKALIRVEKFDKVPSVYEEMILSGCTPDRKARAMLRSA 699
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 157/340 (46%), Gaps = 6/340 (1%)
Query: 152 VLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNC 211
+L+ GQ E + F ++ + TP Y AL++A RN+ +++A + +M+
Sbjct: 173 ILIHALGQSEKLYEAF--LLSQRQNLTPLTYNALISACARNNDLEKALNLITRMRQ-DGY 229
Query: 212 QPDVYTYSTLIKACVDAMRFE--LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
D YS +I++ + R + +++ LY++++ + + N ++ G+ KAG +
Sbjct: 230 PSDFVNYSLIIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKAGDLSKA 289
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
L G+++ + T+ ++ N G+ E +E+ R+ G+ P TR +N L+
Sbjct: 290 LEFL-GVVQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNALLR 348
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
Y K + V+ M + TY+ +I+A+ + G + ++M A ++
Sbjct: 349 GYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQP 408
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
+ F +++ Y + G + K +R + + FYN +I K + L +
Sbjct: 409 NAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATF 468
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
RM + PD+ T++ + + + + G +D+ L +E ++
Sbjct: 469 DRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMME 508
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 170/362 (46%), Gaps = 5/362 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
++ QA++ F+ E QP TY ++ L K G+ A +F +M E G +P Y
Sbjct: 180 KFAQAVEFFDDF-EASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTY 238
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
L+ + C++ L++EA + MK PD++TY++LI+ + R++ L +M
Sbjct: 239 NILIDSLCKDKLVNEALDIFSYMKA-KRISPDIFTYNSLIQGLCNFRRWKEASALLNEMT 297
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
++ PN T N+++ K G + + V M E +PDV T ++++ ++ + ++
Sbjct: 298 SLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGV-EPDVVTYSSLMYGYSLRMEI 356
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ ++ G P+ ++NILI Y K + D+ + M + YN +
Sbjct: 357 VEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTL 416
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I +G + + F+ MH+ G D T+ L++G+ G K R+ +
Sbjct: 417 IHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYL 476
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
+++ YN +I A K +L + +++ + + P+ + ++ + KEG+ D+ A
Sbjct: 477 KPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDE--A 534
Query: 483 LE 484
LE
Sbjct: 535 LE 536
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 148/325 (45%), Gaps = 5/325 (1%)
Query: 167 FNEMVEEGIEPTPEL--YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
FN M+ EP P + +T LL+A + A ++L++ L PD+YT S LI
Sbjct: 82 FNHMLHR--EPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDC 139
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
R +L +++ M + + P+ VT N ++ G K G F Q E++ C+P
Sbjct: 140 FSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDD-FEASGCQP 198
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
V+T TI++ G+ ++K G P T+NILI + K ++ ++ +
Sbjct: 199 TVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIF 258
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
YM+ + TYN++I+ + K +M + + + TF L++
Sbjct: 259 SYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKE 318
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
G + + +++ + +V Y++++ +++E +++ M K C+PD+ ++
Sbjct: 319 GKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSY 378
Query: 465 SIMTEAYAKEGMNDKVYALEQEKLQ 489
+I+ + Y K D+ L E +
Sbjct: 379 NILIKGYCKAKRIDEAKQLFNEMIH 403
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 150/336 (44%), Gaps = 28/336 (8%)
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
+LA VF++M++ G++P + L+ C+ +A + + CQP VYTY+T
Sbjct: 147 DLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEA-SGCQPTVYTYTT 205
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
+I L++ M+E PN VT NI++ K + ++ + S M ++
Sbjct: 206 IINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYM-KAK 264
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYE------KFRNFGIDPETRTFNILIGAYGKK 334
PD++T N+++ N RW E + + I P TFN+L+ A K+
Sbjct: 265 RISPDIFTYNSLIQGLCN------FRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKE 318
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
+ V + M ++ TY++++ +S + F+ M +G K D ++
Sbjct: 319 GKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSY 378
Query: 395 CCLINGYANAG-------LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
LI GY A LF+++I + +NV+ YN +I + L E +
Sbjct: 379 NILIKGYCKAKRIDEAKQLFNEMIH------QGLTPDNVN-YNTLIHGLCQLGRLREAQD 431
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
++K M PD T+S++ + + KEG K + L
Sbjct: 432 LFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRL 467
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 148/335 (44%), Gaps = 13/335 (3%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F +K + P TY L+ L + + A + NEM I P + L
Sbjct: 253 EALDIFSYMKAKRI-SPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVL 311
Query: 186 LAAYCRNSLIDEA---FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET--LYQD 240
+ A C+ + EA F T+ +M +PDV TYS+L+ ++R E++E L+
Sbjct: 312 VDAICKEGKVSEAQGVFKTMTEMGV----EPDVVTYSSLMYGY--SLRMEIVEARKLFDA 365
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M + P+ + NI++ GY KA D+ +++ + M+ PD NT++ G
Sbjct: 366 MITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGL-TPDNVNYNTLIHGLCQLG 424
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
++ + ++ + G P+ T+++L+ + K+ K + M+ + YN
Sbjct: 425 RLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYN 484
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+I+A G+ K F ++ +G+ + + + +IN GL + + + R
Sbjct: 485 ILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGD 544
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
+ YN +I ++ D ++ M+++
Sbjct: 545 GCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDR 579
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 112/270 (41%), Gaps = 42/270 (15%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPEL--ARKVFNEMVEEGIEPTPELYT 183
+A VF+ + E +P TY L+ G S + E+ ARK+F+ M+ +G +P Y
Sbjct: 323 EAQGVFKTMTEMGV-EPDVVTYSSLMY--GYSLRMEIVEARKLFDAMITKGCKPDAFSYN 379
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
L+ YC+ IDEA N+M PD Y+TLI R + L+++M
Sbjct: 380 ILIKGYCKAKRIDEAKQLFNEM-IHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHS 438
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV- 302
P+ T +++L G+ K G + R+ +++S KPD+ N ++ G +
Sbjct: 439 NGNLPDLFTYSMLLDGFCKEGYLGKAFRLFR-VMQSTYLKPDIAMYNILIDAMCKFGNLK 497
Query: 303 -------------------------------DMMERWYEKFRNF---GIDPETRTFNILI 328
+++ E FRN G P+ ++N++I
Sbjct: 498 DARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVII 557
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
+ + + + + ++ MR F + T
Sbjct: 558 RGFLQYKDESRAAQLIGEMRDRGFVAEAGT 587
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 160/348 (45%), Gaps = 5/348 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L + + + A ++ +EM+++ P +Y L+A C+ ID A
Sbjct: 90 PTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNV 149
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L M +C PDV TY++LI C + L + M E +TP+TV N +L G
Sbjct: 150 LKMMLE-RSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLC 208
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K +++ ++L M+E+ +PD ++ NT+++ G+ + + EK P+
Sbjct: 209 KQNQLEEVSKLLEEMVEAGR-EPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDV 267
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+N L+ + K D+ ++E M + T TY +I FS E
Sbjct: 268 VTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMED 327
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G+ D T+ CL++G AG + + + + A +V Y+ +++ K
Sbjct: 328 MFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGK 387
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND---KVYALEQE 486
+ + + + M E+ C+P+ TF+ M + + K G D KV L +E
Sbjct: 388 VDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKE 435
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 155/352 (44%), Gaps = 12/352 (3%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ ++ + A +V +M + GI P Y LL C+ ++EA
Sbjct: 300 PTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHEL 359
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L M +C PDV TYS L+ + + L + M ER PN VT N ++ G+
Sbjct: 360 LEVMVE-KDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFC 418
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
KAG D+ +VL +++ +C PDV T +T++ + R + F GI P+
Sbjct: 419 KAGKVDEGHKVLE-LMKEVSCTPDVVTYSTLIDGYCKA------NRMQDAFAILGISPDK 471
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+++ ++ ++ VM+ M K P TSS Y +I D+ +
Sbjct: 472 ASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQV 531
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G + + T+ LING I+ + + + +V+ Y ++I K +
Sbjct: 532 MSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINK 591
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
+ + +K M++ C PD ++I+ + + G +K E +Q++LE
Sbjct: 592 MDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAI----EVMQLMLE 639
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 155/388 (39%), Gaps = 43/388 (11%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ ++G ++ ++ NEM+ P + +L AYC+ +D A
Sbjct: 21 KPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRA-- 78
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L+ + C P +TY LI R + L +M ++ P+ N ++ G
Sbjct: 79 -LSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGL 137
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G D VL MLE +C PDV T +++ +D + EK + G+ P+
Sbjct: 138 CKMGKIDAARNVLKMMLER-SCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPD 196
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKL-QFPWTSS---------------------- 357
T +N L+ K+ +++S ++E M + + P T S
Sbjct: 197 TVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILE 256
Query: 358 ------------TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
TYN++++ F + E E M T+ LI G++ A
Sbjct: 257 KMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRAD 316
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ K I+ ++ YN ++ KA L E + + M EK C PD T+S
Sbjct: 317 RLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYS 376
Query: 466 IMTEAYAKEGMNDKVYALEQEKLQMLLE 493
I+ K G D L L+M+LE
Sbjct: 377 ILVNGLCKLGKVDDARLL----LEMMLE 400
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 9/239 (3%)
Query: 129 QVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAA 188
+V E++KE P TY L+ K+ + + A + GI P Y+++L
Sbjct: 428 KVLELMKEVSC-TPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEG 480
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP 248
C ++EA ++ M T C P Y+ +I D R + + Q M ER P
Sbjct: 481 LCSTGKVEEAQEVMDLM-TKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEP 539
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW 308
N T +I++ G K + VL MLE C PDV T +++ F ++D +
Sbjct: 540 NLYTYSILINGLCKTKRVEDAINVLDVMLEKG-CVPDVATYTSLIDGFCKINKMDAAYQC 598
Query: 309 YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS 367
++ R+ G +P+ +NILI + + +K VM+ M + ++TY +++ + +
Sbjct: 599 FKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLT 657
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 172/364 (47%), Gaps = 9/364 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A ++ + ++E+ QP + +Y L+ L K+G+ ++A KVF + P Y+ L
Sbjct: 130 EAYELLDEMRERGL-QPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTL 188
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+A C+ +DEA +M+ +C+PDV T++ L+ R + + + + M++R+
Sbjct: 189 IAGLCKTGRLDEACKLFEKMRE-NSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 247
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
TPN +T + ++ G K G + V M+ +P+V T N+++ F VD
Sbjct: 248 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGI-EPNVVTYNSLIHGFCMTNGVDSA 306
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E+ G P+ T+N LI K + + + M+ TY+ +I
Sbjct: 307 LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGG 366
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE- 424
F + F+ M + + D TF L+ GY NAGL V + RL ++ ++
Sbjct: 367 FCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGL---VDDAERLLEEMVASDC 423
Query: 425 --NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
+V Y +++ K ++E RV KRM ++ C+P+ T++ + +A+ + G Y
Sbjct: 424 SPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYK 483
Query: 483 LEQE 486
L +E
Sbjct: 484 LLEE 487
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 182/418 (43%), Gaps = 57/418 (13%)
Query: 117 DHVLKKQWFQ-ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
D + K Q A QV E ++++ P TY L+ L K+GQ A++VF M+ GI
Sbjct: 225 DGLCKGDRLQEAQQVLETMEDRNC-TPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGI 283
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMK---TLPN---------------------- 210
EP Y +L+ +C + +D A + + +M LP+
Sbjct: 284 EPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANR 343
Query: 211 ---------CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
C PDV TYS LI R ++ TL+ DM +++V P+ VT + ++ GY
Sbjct: 344 LFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYC 403
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
AG+ D ER+L M+ S C PDV+T +++ F G++ R ++ G P
Sbjct: 404 NAGLVDDAERLLEEMVAS-DCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNV 462
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+ LI A+ + ++E M TY ++I F GD + E+
Sbjct: 463 VTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLER 522
Query: 382 M-HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV---------SFYNA 431
+ E KAD + +++G G R+++ L++ E + Y A
Sbjct: 523 LERDENCKADMFAYRVMMDGLCRTG---------RMSAALELLEAIKQSGTPPRHDIYVA 573
Query: 432 VISACIKADDLMEMERVYKRMK-EKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
+I + +L + V + M + RP++E + + + A+EG +++ AL E L
Sbjct: 574 LIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELL 631
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 152/336 (45%), Gaps = 10/336 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E TY L+ K + A + EM E G+ P Y+ ++ +CR + +D A+
Sbjct: 40 PNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKL 99
Query: 202 LNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
QM C P++ TY+TL+ C + + E E L +M ER + P+ + + ++ G
Sbjct: 100 FRQM-VENGCMPNLVTYNTLLSGLCRNGLMDEAYE-LLDEMRERGLQPDKFSYDTLMAGL 157
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G D +V + C PDV +T+++ G++D + +EK R +P+
Sbjct: 158 CKTGKIDMALKVFEDN-SNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPD 216
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
TF L+ K + V+E M TY+++I+ G + + F+
Sbjct: 217 VVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFK 276
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACI 437
+M G++ + T+ LI+G+ + + V S++ L ++ ++ YN +I
Sbjct: 277 RMIVRGIEPNVVTYNSLIHGFC---MTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLC 333
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
K E R++ MK K C PD T+S + + K
Sbjct: 334 KTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCK 369
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 124/308 (40%), Gaps = 8/308 (2%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMK---TLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
+T ++ C+ + + EA +MK T+PN +TY+ LI + L
Sbjct: 10 WTIMIDGLCKANRLPEATTYFAKMKKKGTVPN----EWTYNVLINGFCKVHKVHRAYLLL 65
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
++M E + PN VT + V+ G+ + D ++ M+E+ C P++ T NT+LS
Sbjct: 66 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENG-CMPNLVTYNTLLSGLCR 124
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
G +D ++ R G+ P+ +++ L+ K D V E P
Sbjct: 125 NGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVA 184
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
Y+ +I G FE+M + D TF L++G + +
Sbjct: 185 YSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME 244
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
NV Y+++I K + + + V+KRM + P+ T++ + + D
Sbjct: 245 DRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVD 304
Query: 479 KVYALEQE 486
L +E
Sbjct: 305 SALLLMEE 312
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 110/265 (41%), Gaps = 1/265 (0%)
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
C+ +V T++ +I A R T + M ++ PN T N+++ G+ K +
Sbjct: 3 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
+L M ES P+V T +T++ F + +VD + + + G P T+N L+
Sbjct: 63 LLLKEMKESGL-APNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSG 121
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
+ + D+ +++ MR+ +Y+ ++ G FE D
Sbjct: 122 LCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPD 181
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
+ LI G G + + +V + A++ K D L E ++V +
Sbjct: 182 VVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLE 241
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEG 475
M++++C P+ T+S + + K G
Sbjct: 242 TMEDRNCTPNVITYSSLIDGLCKTG 266
>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
Length = 720
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 172/360 (47%), Gaps = 3/360 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL M++ PK T++ ++ LG G+ E A +F EM E G++P + + AL
Sbjct: 299 RALYFLSMVQASGL-NPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNAL 357
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L Y R + EA +++M+ PD +TY L+ A + R+E L + M+ R+
Sbjct: 358 LKGYARKGSLKEAESIISEMEK-SGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARN 416
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
V PNT + +L Y G + + VL M +++ KPD N ++ F +D
Sbjct: 417 VQPNTFIFSRILASYRDRGEWQKTFEVLREM-KNSNVKPDRHFYNVMIDTFGKFNCLDHA 475
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
Y++ + GI+P+ T+N LI + K +D+ + + E M++ + +TYN +I +
Sbjct: 476 METYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINS 535
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ ++ +M ++G+ + T+ L++ Y ++G F+ I + + +
Sbjct: 536 LGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPS 595
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
+ YNA+I+A + + Y+ M RP + + A+ ++ + + +++ Q
Sbjct: 596 ATMYNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSILQ 655
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 150/311 (48%), Gaps = 4/311 (1%)
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE--LIE 235
TP Y AL+ A RN+ +++A +++M+ Q D YS +I++ + + L++
Sbjct: 208 TPLTYNALIGACARNNDLEKALNLMSRMRQ-DGFQSDFINYSLIIQSLTRTNKIDIPLLQ 266
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
LY++++ + + + N ++ G+ KAG ++ LS M++++ P T ++S
Sbjct: 267 KLYEEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLS-MVQASGLNPKTSTFVAVISA 325
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
N G+ + E +E+ + G+ P + FN L+ Y +K + S++ M K
Sbjct: 326 LGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPD 385
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
TY +++A++++G + + +QM A ++ +T F ++ Y + G + K +R
Sbjct: 386 EHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLR 445
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + FYN +I K + L Y RM + PD T++ + + + K G
Sbjct: 446 EMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHG 505
Query: 476 MNDKVYALEQE 486
+D+ L +E
Sbjct: 506 YHDRAAELFEE 516
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 120/307 (39%), Gaps = 42/307 (13%)
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
LY+ L+ A R+ + EAF+ L+Q +TL TY+ LI AC E L
Sbjct: 181 LYSILIHALGRSEKLYEAFI-LSQKQTLTPL-----TYNALIGACARNNDLEKALNLMSR 234
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFD-QMERVLSGMLESATCKPDVWTMNTILSVFANK 299
M + + + ++++ + D + + L +ES + D +N I+ FA
Sbjct: 235 MRQDGFQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAKA 294
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G + + + G++P+T ST+
Sbjct: 295 GDPNRALYFLSMVQASGLNPKT-----------------------------------STF 319
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
VI A + G + E FE+M G+K K F L+ GYA G + S + K
Sbjct: 320 VAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEK 379
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
++ + Y ++ A + K+M+ ++ +P++ FS + +Y G K
Sbjct: 380 SGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQK 439
Query: 480 VYALEQE 486
+ + +E
Sbjct: 440 TFEVLRE 446
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 163/380 (42%), Gaps = 34/380 (8%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P Y L+ ++ + A VF MV GI+P Y +L Y + ++ + V
Sbjct: 175 EPDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVV 234
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L D YTY+TLI C ++ ++ +M P+ VT N +L Y
Sbjct: 235 ALVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVY 294
Query: 261 GKAGMFDQMERVL------------------------SGMLESAT----------CKPDV 286
GKA M D+ VL G+L+ A +PDV
Sbjct: 295 GKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDV 354
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
T T++S G++D Y++ G P T+N LI +G + + +M +V +
Sbjct: 355 ITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDD 414
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
+R F T+N ++ F G + F++M G + T+ LI+ Y+ GL
Sbjct: 415 LRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGL 474
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
F + + + + I ++S YNAV+SA + + E+++ M+ CRPD ++S
Sbjct: 475 FDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSS 534
Query: 467 MTEAYAKEGMNDKVYALEQE 486
+ AYA DK+ AL ++
Sbjct: 535 LLHAYANAKKLDKMKALSED 554
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 170/361 (47%), Gaps = 11/361 (3%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
+ +A +VF+ ++ F +P + T+ LL + GK+ + A V EM G P+ Y
Sbjct: 265 YKEAAKVFDEMRAAGF-EPDKVTFNSLLDVYGKARMHDEAIGVLKEMELGGCPPSVVTYN 323
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
+L+++Y ++ L+ EA L + + QPDV TY+TLI A + + Y +M
Sbjct: 324 SLISSYVKDGLLKEA-AELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLR 382
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
PN T N ++ +G G F +M V L SA PDV T NT+L+VF G
Sbjct: 383 NGCKPNLCTYNALIKLHGVRGKFPEMMAVFDD-LRSAGFVPDVVTWNTLLAVFGQNGLDS 441
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ +++ + G PE T+ LI +Y + ++D+ + + M + STYN V+
Sbjct: 442 EVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVL 501
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
A + G + E F +M + D ++ L++ YANA K + ++ S+ A
Sbjct: 502 SALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANA----KKLDKMKALSEDIYA 557
Query: 424 ENVSFYNAVISACI----KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
E + ++ ++ + K ++L E E+ + + + C D + M Y K M K
Sbjct: 558 EKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKK 617
Query: 480 V 480
V
Sbjct: 618 V 618
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/416 (20%), Positives = 183/416 (43%), Gaps = 24/416 (5%)
Query: 78 ETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSD---------------HVLKK 122
E + G + L L+R K A + T E + H ++
Sbjct: 344 EMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRG 403
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
++ + + VF+ L+ F P T+ LL + G++G VF EM + G P + Y
Sbjct: 404 KFPEMMAVFDDLRSAGFV-PDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTY 462
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
+L+++Y R L D++ +M PD+ TY+ ++ A R+E E L+ +M+
Sbjct: 463 VSLISSYSRCGLFDQSMEIYKRMIE-AGIYPDISTYNAVLSALARGGRWEQAEKLFAEME 521
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
P+ ++ + +L Y A D+M + LS + + + + T++ V + +
Sbjct: 522 NLDCRPDELSYSSLLHAYANAKKLDKM-KALSEDIYAEKIESHHGLVKTLVLVNSKVNNL 580
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
E+ + + + N ++ YGK RM K+ ++ M+ +++TYN++
Sbjct: 581 SETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSL 640
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ- 421
+ +S +GD + E ++ + G + D ++ +I Y G ++ + RL S+++
Sbjct: 641 MHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKG---QMKEASRLFSEMKS 697
Query: 422 --IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ ++ YN + + + E + + M + C+P+ T++ + + Y + G
Sbjct: 698 SGLIPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRGCKPNERTYNSILQEYCRHG 753
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 89/208 (42%), Gaps = 1/208 (0%)
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM-YDKMS 341
+PD ++S F+ + + + GI P T+N+++ Y K + + +
Sbjct: 175 EPDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVV 234
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
++++ M+ P TYN +I K F++M A G + D TF L++ Y
Sbjct: 235 ALVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVY 294
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
A + + I ++ +V YN++IS+ +K L E + + M+ K +PD
Sbjct: 295 GKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDV 354
Query: 462 ETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
T++ + + G D E L+
Sbjct: 355 ITYTTLISGLDRAGKIDAAIGTYDEMLR 382
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 2/153 (1%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
++ + GK+ + ++ + M I + Y +L+ Y R ++ L ++K+
Sbjct: 605 MVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKS-S 663
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+PD Y+Y+T+I A + + L+ +M + P+ VT NI + Y MF++
Sbjct: 664 GARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEA 723
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
++ M+ CKP+ T N+IL + G++
Sbjct: 724 IDLVRYMVTRG-CKPNERTYNSILQEYCRHGKI 755
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 1/132 (0%)
Query: 145 GTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQ 204
TY L+ + + G E + E+ G P Y ++ AY R + EA ++
Sbjct: 635 ATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSE 694
Query: 205 MKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG 264
MK+ PD+ TY+ +K+ V FE L + M R PN T N +L Y + G
Sbjct: 695 MKS-SGLIPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRGCKPNERTYNSILQEYCRHG 753
Query: 265 MFDQMERVLSGM 276
+ LS +
Sbjct: 754 KIADAKSFLSNL 765
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 161/356 (45%), Gaps = 3/356 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F +KE+ +P TY L+ L K + + ARK+ +EM E+G+ P+ Y AL
Sbjct: 317 EALNLFNEMKEKGC-EPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNAL 375
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ YC+ +ID+AF L+ M++ +C P+ TY+ LI + L M ER
Sbjct: 376 IDGYCKEGMIDDAFEILDLMES-NSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERK 434
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
++P+ +T N ++ G K + R+LS M E+ PD WT + + +G+V+
Sbjct: 435 LSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLV-PDQWTYSVFIDTLCKEGRVEEA 493
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++ + G+ + LI Y K D S++E M S TYN +IE
Sbjct: 494 GTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEG 553
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
K +M G+K T+ LI G F + L +
Sbjct: 554 LCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPD 613
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
V Y A + A L E++ V +M E+ PD T++++ + YA+ G+ + +
Sbjct: 614 VCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAF 669
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 157/362 (43%), Gaps = 48/362 (13%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H K A +VF ++ Q Q E +Y L+ L ++G+ A K+F +M E+ P
Sbjct: 239 HCRNKGVDNAYEVF-LIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCP 297
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
T YT L+ A + EA N+MK C+P+V+TY+ LI + + +
Sbjct: 298 TVRTYTVLIYALSGSGRKVEALNLFNEMKE-KGCEPNVHTYTVLIDGLCKENKMDEARKM 356
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
+M E+ + P+ VT N ++ GY K GM D +L ++ES +C P+ T N ++
Sbjct: 357 LSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILD-LMESNSCGPNTRTYNELICGLC 415
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD-----KMSSVMEYMRKLQF 352
K +V K + P T+N LI +G+ ++ D ++ S+M +
Sbjct: 416 KKRKVHKAMALLNKMLERKLSPSLITYNSLI--HGQCKVNDLESAYRLLSLMNENGLVPD 473
Query: 353 PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVIS 412
WT S + I+ G + F+ + A+G+KA+ + LI+GY G
Sbjct: 474 QWTYSVF---IDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVG------- 523
Query: 413 SVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
K+ +A ++ +RM C P+S T++++ E
Sbjct: 524 ------KIDVAYSL----------------------LERMLNDACLPNSYTYNVLIEGLC 555
Query: 473 KE 474
KE
Sbjct: 556 KE 557
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 163/375 (43%), Gaps = 21/375 (5%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A ++ ++ E P + TY + L K G+ E A +F+ + +G++ +YTAL+
Sbjct: 458 AYRLLSLMNENGLV-PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALI 516
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
YC+ ID A+ L +M C P+ YTY+ LI+ + + +L M V
Sbjct: 517 DGYCKVGKIDVAYSLLERMLN-DACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGV 575
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P VT I++G K G FD +V + M+ S +PDV T L + ++G ++ ++
Sbjct: 576 KPTVVTYTILIGEMLKDGAFDHALKVFNHMV-SLGYQPDVCTYTAFLHAYFSQGMLEEVD 634
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGK----KRMYDKMSSVMEYMRKLQFPWTS------ 356
K GI P+ T+ +LI Y + R +D + +++ K S
Sbjct: 635 DVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNL 694
Query: 357 STYNNVIEAFSDMGD---AKHMEY-----TFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
S N + E S++G + +EY FE+M G D + LI G+
Sbjct: 695 SHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLE 754
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ V + ++ + YN+++ C K E R+ M E P E++ ++
Sbjct: 755 EAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLV 814
Query: 469 EAYAKEGMNDKVYAL 483
EG N+K A+
Sbjct: 815 CGLYIEGSNEKAKAV 829
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 145/336 (43%), Gaps = 2/336 (0%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
++P Y +L+ L K + + V+ E++ I P + A++ YC+ + EA
Sbjct: 155 FKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAE 214
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+ +++ PD +TY++LI + ++ M ++ N V+ ++ G
Sbjct: 215 LYASKI-VQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHG 273
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+AG ++ ++ + M E C P V T ++ + G+ + + + G +P
Sbjct: 274 LCEAGRINEALKLFADMTEDNCC-PTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEP 332
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
T+ +LI K+ D+ ++ M + + TYN +I+ + G
Sbjct: 333 NVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEIL 392
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
+ M + +T+T+ LI G HK ++ + + +++ ++ YN++I K
Sbjct: 393 DLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKV 452
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+DL R+ M E PD T+S+ + KEG
Sbjct: 453 NDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEG 488
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/357 (19%), Positives = 152/357 (42%), Gaps = 34/357 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L K + + A + +M+ G++PT YT L+ ++ D A
Sbjct: 542 PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKV 601
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
N M +L QPDV TY+ + A E ++ + M+E + P+ VT +++ GY
Sbjct: 602 FNHMVSLGY-QPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYA 660
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTI------------------LSVFANKGQVD 303
+ G+ + L M+++ CKP ++ ++ + + +N + +
Sbjct: 661 RLGLTHRAFDFLKCMVDTG-CKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYE 719
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ + +EK G + + LI + ++ ++ ++ +M++ + YN+++
Sbjct: 720 IALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLL 779
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISSVRL 416
+ +G + M G+ +++ L+ G G +FH ++S
Sbjct: 780 DCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYN 839
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
++ + +I +K D + E + M+EK C+P+ T+S++ E +
Sbjct: 840 YDEVA-------WKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGLER 889
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 122/294 (41%), Gaps = 21/294 (7%)
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
+P + Y+T++ + + + ++T+Y ++ ++PN T N ++ GY K G + E
Sbjct: 156 KPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAEL 215
Query: 272 VLSGMLESATCKPDVWTMNT-ILSVFANKGQVDMMERWYEKF---------RNFGIDPET 321
S ++++ PD +T + IL NKG ++ YE F RN E
Sbjct: 216 YASKIVQAGL-HPDTFTYTSLILGHCRNKG----VDNAYEVFLIMPQKGCQRN-----EV 265
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
N++ G R+ + + + P T TY +I A S G F +
Sbjct: 266 SYTNLIHGLCEAGRINEALKLFADMTEDNCCP-TVRTYTVLIYALSGSGRKVEALNLFNE 324
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M +G + + T+ LI+G + + S+ + +V YNA+I K
Sbjct: 325 MKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGM 384
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
+ + + M+ C P++ T++ + K+ K AL + L+ L S
Sbjct: 385 IDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPS 438
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 121/339 (35%), Gaps = 34/339 (10%)
Query: 94 LKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPF-------------- 139
L + L ++ K K + VA+ + V + + EMLK+ F
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG 609
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
YQP TY L G E V +M EEGI P YT L+ Y R L AF
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAF 669
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIK------------------ACVDAMRFELIETLYQDM 241
L M C+P +Y S LIK + + + +E+ L++ M
Sbjct: 670 DFLKCMVD-TGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKM 728
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
E T + ++ G+ + ++ + ++ M E P N++L G
Sbjct: 729 VEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGM-SPSEDIYNSLLDCCCKLGV 787
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
R + G+ P ++ +L+ + +K +V + + + +
Sbjct: 788 YAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKV 847
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+I+ + M +G + + T+ LI G
Sbjct: 848 LIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEG 886
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 159/350 (45%), Gaps = 3/350 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
AL+V +++ ++ + P TY ++ L K+G+ + A+ + N+MV+ G P + L
Sbjct: 318 HALKVMDLMLQEG-HDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTL 376
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A C + ++EA L + T+ PDVYT++ LI A L L+++M
Sbjct: 377 IVALCSQNRLEEAL-DLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSG 435
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ VT NI++ G +L M ES C T NTI+ + +++
Sbjct: 436 CAPDEVTYNILIDHLCSMGKLVNALDLLKEM-ESNGCPRSTVTYNTIIDALCKQMRIEEA 494
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E +++ GI TFN LI K + D + ++E M K ++ TYN+++
Sbjct: 495 EEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTH 554
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ GD K E M A G + D T+ LING AG + +R I
Sbjct: 555 YCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPT 614
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
YN VI + + ++L + +++ M E PD+ T+ I+ + G
Sbjct: 615 PKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGG 664
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 152/385 (39%), Gaps = 38/385 (9%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
ALQ+ + + P Y +++ LG +G +L + EM EG E + + +
Sbjct: 72 ALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFV 131
Query: 187 AAYCRNSLIDEAF-VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+Y R D+A + NQ+ T Q D Y+ L+ + R +L+E++Y +M +R
Sbjct: 132 ESYARLRRFDDAVDLVRNQLNTF-GVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRG 190
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+ VT N ++ +A +L M S PD T T++ F +G ++
Sbjct: 191 IQPDVVTLNTLIKALCRAHQVRTAVLMLEEM-SSHAVAPDETTFTTLMQGFIEEGSIEAA 249
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGK-KRMYDKMS----------------------- 341
R K G P T N+LI Y K R+ D +
Sbjct: 250 LRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHC 309
Query: 342 -----------SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
VM+ M + TYN VI S G+ + QM G D
Sbjct: 310 LCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPD 369
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
T TF LI + + + R + ++ +V +N +I+A K D R+++
Sbjct: 370 TTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFE 429
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEG 475
MK C PD T++I+ + G
Sbjct: 430 EMKSSGCAPDEVTYNILIDHLCSMG 454
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 167/387 (43%), Gaps = 50/387 (12%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
Q Y LL +L + + +L V+NEM + GI+P L+ A CR + A +
Sbjct: 157 QADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVL 216
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +M + PD T++TL++ ++ E + M E +P VT N+++ GY
Sbjct: 217 MLEEMSS-HAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGY 275
Query: 261 GKAGMF-----------------DQME------------------RVLSGMLESATCKPD 285
K G DQ+ +V+ ML+ PD
Sbjct: 276 CKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGH-DPD 334
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
V+T NT+++ + G++D + + + G P+T TFN LI A + +++ ++
Sbjct: 335 VFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQ---NRLEEALD 391
Query: 346 YMRKLQFPWTSS---TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
R+L S T+N +I A +GD FE+M + G D T+ LI+
Sbjct: 392 LARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLC 451
Query: 403 NAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
+ G K+++++ L +++ + YN +I A K + E E V+ +M
Sbjct: 452 SMG---KLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISR 508
Query: 460 DSETFSIMTEAYAK-EGMNDKVYALEQ 485
+ TF+ + + K + ++D +EQ
Sbjct: 509 SAVTFNTLIDGLCKAKRIDDATELIEQ 535
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 166/346 (47%), Gaps = 2/346 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY ++ L K G +LA + +M + IE +Y ++ C+ +D+AF
Sbjct: 218 QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFD 277
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
N+M+T +PDV+TY++LI + R+ L DM ER + PN VT N ++ +
Sbjct: 278 LFNKMET-KGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAF 336
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + E++ M++ + P++ T N++++ F ++D ++ + + P+
Sbjct: 337 AKEGKLIEAEKLFDEMIQRSI-DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 395
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+N LI + K + ++ + M + + TYN +I+ GD + F+
Sbjct: 396 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 455
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M ++G+ D T+ L++G G K + K ++ N+ YN +I KA
Sbjct: 456 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAG 515
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ + ++ + K +P+ ++ M + ++G+ ++ AL +E
Sbjct: 516 KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 561
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 146/364 (40%), Gaps = 35/364 (9%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY LL + Q LA V +M++ G EP ++LL YC I EA ++QM
Sbjct: 118 TYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 177
Query: 206 KTLP----------------------------------NCQPDVYTYSTLIKACVDAMRF 231
+ CQPD++TY T++
Sbjct: 178 VEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 237
Query: 232 ELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNT 291
+L +L + M++ + N V N ++ G K D + + M E+ KPDV+T N+
Sbjct: 238 DLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKM-ETKGIKPDVFTYNS 296
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
++S N G+ R I+P TFN LI A+ K+ + + + M +
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 356
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
TYN++I F + F M ++ D T+ LI G+ A + +
Sbjct: 357 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGM 416
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
R S+ + N YN +I +A D ++++K+M PD T+SI+ +
Sbjct: 417 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 476
Query: 472 AKEG 475
K G
Sbjct: 477 CKYG 480
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 154/360 (42%), Gaps = 16/360 (4%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
A+ +F EM+K +PF P + KLL + K + ++ + +M GI Y+
Sbjct: 64 DAVALFGEMVKSRPF--PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
LL +CR S + A L +M L +PD+ T S+L+ R L M E
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKL-GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
P+TVT N ++ G + ++ M+ C+PD++T T+++ +G +D+
Sbjct: 181 GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARG-CQPDLFTYGTVVNGLCKRGDIDL 239
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+K I+ +N +I K + D + M TYN++I
Sbjct: 240 ALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLIS 299
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL---Q 421
+ G M + + TF LI+ +A G K+I + +L ++
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEG---KLIEAEKLFDEMIQRS 356
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK-----EGM 476
I N+ YN++I+ D L E ++++ M K C PD T++ + + + K EGM
Sbjct: 357 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGM 416
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 133/312 (42%), Gaps = 38/312 (12%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W A ++ + E+ P T+ L+ K G+ A K+F+EM++ I+P Y
Sbjct: 306 RWSDASRLLSDMIERKI-NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 364
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
+L+ +C + +DEA M + +C PDV TY+TLIK A R E L+++M
Sbjct: 365 NSLINGFCMHDRLDEAQQIFTLMVS-KDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMS 423
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
+R + NTVT N ++ G +AG D +++ M+ PD+ T + +L G++
Sbjct: 424 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV-PPDIITYSILLDGLCKYGKL 482
Query: 303 DMMERWYEKFRNFGIDPETRTFNILI---------------------------------- 328
+ +E + ++P T+NI+I
Sbjct: 483 EKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 542
Query: 329 -GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
+ +K + ++ ++ M++ S YN +I A GD ++M + G
Sbjct: 543 ISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGF 602
Query: 388 KADTKTFCCLIN 399
D T +IN
Sbjct: 603 VGDASTISMVIN 614
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 91/191 (47%), Gaps = 2/191 (1%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ L ++G ++A+K+F +MV +G+ P Y+ LL C+ +++A V +
Sbjct: 433 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 492
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ +P++YTY+ +I+ A + E L+ + + V PN + ++ G+ + G+
Sbjct: 493 QK-SKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGL 551
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
++ + + M E T PD NT++ G ++ R+ G + T +
Sbjct: 552 KEEADALFREMKEDGTL-PDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTIS 610
Query: 326 ILIGAYGKKRM 336
++I R+
Sbjct: 611 MVINMLHDGRL 621
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 133/306 (43%), Gaps = 19/306 (6%)
Query: 191 RNSL----IDEAFVTLNQM-KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
RN L +D+A +M K+ P P + +S L+ A +F+++ +L + M
Sbjct: 54 RNGLSELKLDDAVALFGEMVKSRP--FPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG 111
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ N T +I+L + + VL M++ +PD+ T++++L+ + + ++
Sbjct: 112 IPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGY-EPDIVTLSSLLNGYCHGKRISEA 170
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++ G P+T TFN LI + ++++ M TY V+
Sbjct: 171 VALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNG 230
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---I 422
GD ++M ++A+ + +I+G + + + L +K++ I
Sbjct: 231 LCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCK---YKHMDDAFDLFNKMETKGI 287
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
+V YN++IS + R+ M E+ P+ TF+ + +A+AKEG
Sbjct: 288 KPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGK-----L 342
Query: 483 LEQEKL 488
+E EKL
Sbjct: 343 IEAEKL 348
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 71/177 (40%)
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P F+ L+ A K +D + S+ E M+ L P TY+ ++ F
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAV 138
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
+M G + D T L+NGY + + ++ V ++ + +N +I
Sbjct: 139 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFL 198
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
+ E + RM + C+PD T+ + K G D +L ++ + +EA+
Sbjct: 199 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAN 255
>gi|168045822|ref|XP_001775375.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673320|gb|EDQ59845.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 406
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 163/361 (45%), Gaps = 9/361 (2%)
Query: 121 KKQWFQALQV-FEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
+ +W L+V F ++EQ +Y+ G + KL+V +GK+ Q +A F E+ G P
Sbjct: 16 QSKWTLILEVTFRWMQEQKWYRLDNGFHSKLIVTMGKAKQLRMAVWFFKEVKRNGHRPDT 75
Query: 180 ELYTALLAAYC----RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
LY AL+ A+ + +A +MKT NC+PD+ TY+ L++ +E
Sbjct: 76 SLYNALITAHLQAEDKRIGFAKALQLFEEMKTKANCKPDLVTYNILLRGSAQVRDILQVE 135
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
+++M+ + PN ++ N V+G YGKAG QME+ L M KPD T NT++
Sbjct: 136 RFFEEMEVEKIHPNLISYNGVIGAYGKAGDLVQMEKTLFTMRILKHIKPDTVTSNTLIES 195
Query: 296 FANKGQVDMMERWYEKF---RNFGID-PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
+ ME+ ++ +N P+ +T+NIL+ +Y + KM M
Sbjct: 196 YGYGRDFVKMEQVFKSMTAAKNKQTSRPDAKTYNILMASYARLGEVGKMEWSCSRMEAAN 255
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
F +Y ++ + ++G M F QM GM+ T ++ Y F +
Sbjct: 256 FKLNLRSYEILMTGYGEVGAIASMSECFYQMLQAGMQPQKSTLNAMLRAYCKHNCFEEAE 315
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
+ A Q S Y ++ A K ++E + +RM + P + TF E++
Sbjct: 316 ELLNDALGWQTRPRTSSYLILLRAYAKERRSSDVEMLTERMAKVGIAPCAATFLEALESF 375
Query: 472 A 472
+
Sbjct: 376 S 376
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 167/381 (43%), Gaps = 15/381 (3%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
AL+V +++ ++ + P TY ++ L K+GQ E A+ + N+MVE G P + L
Sbjct: 308 HALKVMDVMVQEG-HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTL 366
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A C + ++EA L + TL PDVYT++ LI A +L L+++M
Sbjct: 367 IVALCSGNRLEEAL-DLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSG 425
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
TP+ VT N ++ G + +L M ESA C T NTI+ K +++
Sbjct: 426 CTPDEVTYNTLIDNLCSLGKLGKALDLLKEM-ESAGCPRSTVTYNTIIDGLCKKMRIEEA 484
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E +++ GI TFN LI K + D + ++ M + TYN+++
Sbjct: 485 EEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTH 544
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ GD K + M A G + D T+ LING AG + +R +
Sbjct: 545 YCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRAT 604
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG---------- 475
YN VI + + ++ + +++ M E PD+ T+ I+ + G
Sbjct: 605 PKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFL 664
Query: 476 --MNDKVYALEQEKLQMLLEA 494
M DK + E +ML E
Sbjct: 665 LEMVDKGFIPEFSSFRMLAEG 685
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 134/317 (42%), Gaps = 4/317 (1%)
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSL-IDEAFVTLNQMKTLPNCQPDVYTYS 219
+L + + EM EG + + + L +Y R L +D + LNQ+ L Q D Y+
Sbjct: 95 DLMKVLVTEMRREGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYN 154
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
L+ V+ + +L+ET+Y +M ER + P+ VT N ++ +A +L M S
Sbjct: 155 HLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM-SS 213
Query: 280 ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK-KRMYD 338
+ PD T T++ F +G + R + G P T N+LI Y K R+ D
Sbjct: 214 SGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVED 273
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+ + + + F TYN + G H + M EG D T+ ++
Sbjct: 274 ALGYIQQEIAN-GFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVV 332
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
N G + + + +++ +N +I A + L E + +++ K
Sbjct: 333 NCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLS 392
Query: 459 PDSETFSIMTEAYAKEG 475
PD TF+I+ A K G
Sbjct: 393 PDVYTFNILINALCKVG 409
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 86/191 (45%), Gaps = 11/191 (5%)
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY-DKMSSVMEYMRKLQFPWTSST--Y 359
D+M+ + R G + + +Y +++++ D + V+ + L F + T Y
Sbjct: 95 DLMKVLVTEMRREGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPL-FGIQADTVVY 153
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
N+++ + K +E + +M G+K D TF L+ A H+V ++V + +
Sbjct: 154 NHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRA---HQVRTAVLMLEE 210
Query: 420 LQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG- 475
+ +A + + + ++ ++ + RV RM E C P T +++ Y K G
Sbjct: 211 MSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGR 270
Query: 476 MNDKVYALEQE 486
+ D + ++QE
Sbjct: 271 VEDALGYIQQE 281
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 161/361 (44%), Gaps = 17/361 (4%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QA+ FE LK + + P TY LL + GK+G A +V EM + G +P Y L
Sbjct: 269 QAVAFFEDLKARG-HVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNEL 327
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
Y R +EA L+ M T P+ +TY+T++ A + R + L+ M +
Sbjct: 328 AGTYARAGFFEEAAKCLDTM-TSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNG 386
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN T N++ G GK F M +L M S C P+ T NT+L+V +G D +
Sbjct: 387 YVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSG-CTPNRVTWNTMLAVCGKRGMEDYV 445
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKK-------RMYDKMSSVMEYMRKLQFPWTSST 358
R ++ G++ T+N LI AYG+ +MYD+M S F +T
Sbjct: 446 TRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISS-------GFTPCLTT 498
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN ++ S GD + +M G K + +++ L+ YA G + S +
Sbjct: 499 YNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVY 558
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
I + ++ A K L +E+ ++ +K + +PD F+ M YAK G+
Sbjct: 559 VGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYS 618
Query: 479 K 479
K
Sbjct: 619 K 619
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 166/382 (43%), Gaps = 50/382 (13%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y +L L ++G+ E A ++F E+ +G+ PT Y +L Y R V L +
Sbjct: 183 YTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEM 242
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
+PD +T ST+I AC + ++D+ R P VT N +L +GKAG +
Sbjct: 243 RAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNY 302
Query: 267 DQMERVLSGMLESATCKPDV-----------------------------------WTMNT 291
+ RVL M E + C+PD +T NT
Sbjct: 303 TEALRVLKEM-EDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNT 361
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
+++ +AN G+VD +++ + G P T+N++ G GKK + M ++E M +
Sbjct: 362 VMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSG 421
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG------ 405
T+N ++ G ++ M + G++ T+ LI+ Y G
Sbjct: 422 CTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAF 481
Query: 406 -LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
++ ++ISS ++ YNA+++ + D + + +M + +P+ +++
Sbjct: 482 KMYDEMISS-------GFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSY 534
Query: 465 SIMTEAYAKEGMNDKVYALEQE 486
S++ + YAK G + ++E+E
Sbjct: 535 SLLLQCYAKGGNAAGIESIEKE 556
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 145/333 (43%), Gaps = 5/333 (1%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL L SG E A + +EG L ++ A R D L++M P
Sbjct: 116 LLKALELSGHWEWALALLRWASDEGAADAAAL-EMVVRALGREGQHDVVCDLLDEMPLPP 174
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+ DV Y+T++ A A R+E L+ ++ + V P VT N+VL YG+ G
Sbjct: 175 GSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGR--SW 232
Query: 270 ERVLSGM--LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
R+++ + + +A +PD +T +T+++ G +D ++E + G P T+N L
Sbjct: 233 PRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNAL 292
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
+ +GK Y + V++ M + TYN + ++ G + + M ++G+
Sbjct: 293 LQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGL 352
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
+T T+ ++ YAN G + ++ K NV+ YN + K M
Sbjct: 353 LPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLE 412
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+ + M C P+ T++ M K GM D V
Sbjct: 413 MLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYV 445
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 169/410 (41%), Gaps = 64/410 (15%)
Query: 121 KKQWFQALQVFEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPT 178
KK F A+ EML+E + P T+ +L + GK G + +V N M G+E +
Sbjct: 403 KKSRFTAM--LEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELS 460
Query: 179 PELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
+ Y L++AY R AF ++M + P + TY+ L+ + +++
Sbjct: 461 RDTYNTLISAYGRCGSRTYAFKMYDEMIS-SGFTPCLTTYNALLNVLSRQGDWSTAQSIV 519
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQME---------------------------- 270
M + PN + +++L Y K G +E
Sbjct: 520 SKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKC 579
Query: 271 RVLSGM------LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
R L G+ +++ KPD+ N++L+++A G ++ + G+ P+ T+
Sbjct: 580 RRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITY 639
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
N L+ Y K + +++ ++ Q +YN VI F G K + +M A
Sbjct: 640 NSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIA 699
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
+GM T+ L+ GYA+ +F++ V N +I +L
Sbjct: 700 DGMAPCVVTYHTLVGGYASLEMFNEAREVV---------------NYMIH-----HNLKP 739
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEA 494
ME Y+R+ + +C+ ++ + E ++ D+ + +KLQ +LEA
Sbjct: 740 MELTYRRVVDSYCK--AKRYDEAREFLSEISDTDQNF---DQKLQHMLEA 784
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 161/361 (44%), Gaps = 17/361 (4%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QA+ FE LK + + P TY LL + GK+G A +V EM + G +P Y L
Sbjct: 269 QAVAFFEDLKARG-HVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNEL 327
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
Y R +EA L+ M T P+ +TY+T++ A + R + L+ M +
Sbjct: 328 AGTYARAGFFEEAAKCLDTM-TSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNG 386
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN T N++ G GK F M +L M S C P+ T NT+L+V +G D +
Sbjct: 387 YVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSG-CTPNRVTWNTMLAVCGKRGMEDYV 445
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKK-------RMYDKMSSVMEYMRKLQFPWTSST 358
R ++ G++ T+N LI AYG+ +MYD+M S F +T
Sbjct: 446 TRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISS-------GFTPCLTT 498
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN ++ S GD + +M G K + +++ L+ YA G + S +
Sbjct: 499 YNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVY 558
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
I + ++ A K L +E+ ++ +K + +PD F+ M YAK G+
Sbjct: 559 VGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYS 618
Query: 479 K 479
K
Sbjct: 619 K 619
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 166/382 (43%), Gaps = 50/382 (13%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y +L L ++G+ E A ++F E+ +G+ PT Y +L Y R V L +
Sbjct: 183 YTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEM 242
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
+PD +T ST+I AC + ++D+ R P VT N +L +GKAG +
Sbjct: 243 RAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNY 302
Query: 267 DQMERVLSGMLESATCKPDV-----------------------------------WTMNT 291
+ RVL M E + C+PD +T NT
Sbjct: 303 TEALRVLKEM-EDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNT 361
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
+++ +AN G+VD +++ + G P T+N++ G GKK + M ++E M +
Sbjct: 362 VMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSG 421
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG------ 405
T+N ++ G ++ M + G++ T+ LI+ Y G
Sbjct: 422 CTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAF 481
Query: 406 -LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
++ ++ISS ++ YNA+++ + D + + +M + +P+ +++
Sbjct: 482 KMYDEMISS-------GFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSY 534
Query: 465 SIMTEAYAKEGMNDKVYALEQE 486
S++ + YAK G + ++E+E
Sbjct: 535 SLLLQCYAKGGNAAGIESIEKE 556
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 145/333 (43%), Gaps = 5/333 (1%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL L SG E A + +EG L ++ A R D L++M P
Sbjct: 116 LLKALELSGHWEWALALLRWASDEGAADAAAL-EMVVRALGREGQHDVVCDLLDEMPLPP 174
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+ DV Y+T++ A A R+E L+ ++ + V P VT N+VL YG+ G
Sbjct: 175 GSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGR--SW 232
Query: 270 ERVLSGM--LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
R+++ + + +A +PD +T +T+++ G +D ++E + G P T+N L
Sbjct: 233 PRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNAL 292
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
+ +GK Y + V++ M + TYN + ++ G + + M ++G+
Sbjct: 293 LQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGL 352
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
+T T+ ++ YAN G + ++ K NV+ YN + K M
Sbjct: 353 LPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLE 412
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+ + M C P+ T++ M K GM D V
Sbjct: 413 MLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYV 445
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 169/410 (41%), Gaps = 64/410 (15%)
Query: 121 KKQWFQALQVFEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPT 178
KK F A+ EML+E + P T+ +L + GK G + +V N M G+E +
Sbjct: 403 KKSRFTAM--LEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELS 460
Query: 179 PELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
+ Y L++AY R AF ++M + P + TY+ L+ + +++
Sbjct: 461 RDTYNTLISAYGRCGSRTYAFKMYDEMIS-SGFTPCLTTYNALLNVLSRQGDWSTAQSIV 519
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQME---------------------------- 270
M + PN + +++L Y K G +E
Sbjct: 520 SKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKC 579
Query: 271 RVLSGM------LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
R L G+ +++ KPD+ N++L+++A G ++ + G+ P+ T+
Sbjct: 580 RRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITY 639
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
N L+ Y K + +++ ++ Q +YN VI F G K + +M A
Sbjct: 640 NSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIA 699
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
+GM T+ L+ GYA+ +F++ V N +I +L
Sbjct: 700 DGMAPCVVTYHTLVGGYASLEMFNEAREVV---------------NYMIH-----HNLKP 739
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEA 494
ME Y+R+ + +C+ ++ + E ++ D+ + +KLQ +LEA
Sbjct: 740 MELTYRRVVDSYCK--AKRYDEAREFLSEISDTDQNF---DQKLQHMLEA 784
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 161/361 (44%), Gaps = 17/361 (4%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QA+ FE LK + + P TY LL + GK+G A +V EM + G +P Y L
Sbjct: 178 QAVAFFEDLKARG-HVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNEL 236
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
Y R +EA L+ M T P+ +TY+T++ A + R + L+ M +
Sbjct: 237 AGTYARAGFFEEAAKCLDTM-TSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNG 295
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN T N++ G GK F M +L M S C P+ T NT+L+V +G D +
Sbjct: 296 YVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSG-CTPNRVTWNTMLAVCGKRGMEDYV 354
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKK-------RMYDKMSSVMEYMRKLQFPWTSST 358
R ++ G++ T+N LI AYG+ +MYD+M S F +T
Sbjct: 355 TRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISS-------GFTPCLTT 407
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN ++ S GD + +M G K + +++ L+ YA G + S +
Sbjct: 408 YNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVY 467
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
I + ++ A K L +E+ ++ +K + +PD F+ M YAK G+
Sbjct: 468 VGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYS 527
Query: 479 K 479
K
Sbjct: 528 K 528
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 166/382 (43%), Gaps = 50/382 (13%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y +L L ++G+ E A ++F E+ +G+ PT Y +L Y R V L +
Sbjct: 92 YTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEM 151
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
+PD +T ST+I AC + ++D+ R P VT N +L +GKAG +
Sbjct: 152 RAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNY 211
Query: 267 DQMERVLSGMLESATCKPDV-----------------------------------WTMNT 291
+ RVL M E + C+PD +T NT
Sbjct: 212 TEALRVLKEM-EDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNT 270
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
+++ +AN G+VD +++ + G P T+N++ G GKK + M ++E M +
Sbjct: 271 VMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSG 330
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG------ 405
T+N ++ G ++ M + G++ T+ LI+ Y G
Sbjct: 331 CTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAF 390
Query: 406 -LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
++ ++ISS ++ YNA+++ + D + + +M + +P+ +++
Sbjct: 391 KMYDEMISS-------GFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSY 443
Query: 465 SIMTEAYAKEGMNDKVYALEQE 486
S++ + YAK G + ++E+E
Sbjct: 444 SLLLQCYAKGGNAAGIESIEKE 465
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 142/326 (43%), Gaps = 5/326 (1%)
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
SG E A + +EG L ++ A R D L++M P + DV
Sbjct: 32 SGHWEWALALLRWASDEGAADAAAL-EMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVR 90
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
Y+T++ A A R+E L+ ++ + V P VT N+VL YG+ G R+++ +
Sbjct: 91 AYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGR--SWPRIVALL 148
Query: 277 --LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
+ +A +PD +T +T+++ G +D ++E + G P T+N L+ +GK
Sbjct: 149 EEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKA 208
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
Y + V++ M + TYN + ++ G + + M ++G+ +T T+
Sbjct: 209 GNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTY 268
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
++ YAN G + ++ K NV+ YN + K M + + M
Sbjct: 269 NTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSR 328
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDKV 480
C P+ T++ M K GM D V
Sbjct: 329 SGCTPNRVTWNTMLAVCGKRGMEDYV 354
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 169/410 (41%), Gaps = 64/410 (15%)
Query: 121 KKQWFQALQVFEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPT 178
KK F A+ EML+E + P T+ +L + GK G + +V N M G+E +
Sbjct: 312 KKSRFTAM--LEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELS 369
Query: 179 PELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
+ Y L++AY R AF ++M + P + TY+ L+ + +++
Sbjct: 370 RDTYNTLISAYGRCGSRTYAFKMYDEMIS-SGFTPCLTTYNALLNVLSRQGDWSTAQSIV 428
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQME---------------------------- 270
M + PN + +++L Y K G +E
Sbjct: 429 SKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKC 488
Query: 271 RVLSGM------LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
R L G+ +++ KPD+ N++L+++A G ++ + G+ P+ T+
Sbjct: 489 RRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITY 548
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
N L+ Y K + +++ ++ Q +YN VI F G K + +M A
Sbjct: 549 NSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIA 608
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
+GM T+ L+ GYA+ +F++ V N +I +L
Sbjct: 609 DGMAPCVVTYHTLVGGYASLEMFNEAREVV---------------NYMIH-----HNLKP 648
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEA 494
ME Y+R+ + +C+ ++ + E ++ D+ + +KLQ +LEA
Sbjct: 649 MELTYRRVVDSYCK--AKRYDEAREFLSEISDTDQNF---DQKLQHMLEA 693
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 171/369 (46%), Gaps = 17/369 (4%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY +L ++ KSGQ LA ++ +M E I+ Y+ ++ C++ +D AF
Sbjct: 323 QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN 382
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
N+M+ + ++ TY+ LI +A R++ L +DM +R + PN VT ++++ +
Sbjct: 383 LFNEME-MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 441
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + E + M+ PD T +++ F + +D + + + G DP
Sbjct: 442 VKEGKLREAEELHKEMIHRGI-APDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 500
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT---SSTYNNVIEAFSDMGDAKHMEY 377
RTFNILI Y K +++ +E RK+ + TYN +I+ F ++G +
Sbjct: 501 IRTFNILINGYCKA---NRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 557
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
F++M + + + T+ L++G + G K + K ++ ++ YN +I
Sbjct: 558 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 617
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
A + + ++ + K +P +T++IM K+G E E L +E GH
Sbjct: 618 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG-----PLSEAELLFRKMEEDGH 672
Query: 498 ----WQQNI 502
W NI
Sbjct: 673 APDGWTYNI 681
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 140/326 (42%), Gaps = 4/326 (1%)
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
LA ++++ G EP ++ L+ C + EA +++M + + +PD+ T +TL
Sbjct: 239 LAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH-KPDLITINTL 297
Query: 222 IKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
+ C+ E + L M E PN VT VL K+G +L M E
Sbjct: 298 VNGLCLSGKEAEAM-LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM-EER 355
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
K D + I+ G +D + + GI T+NILIG + +D
Sbjct: 356 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDG 415
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+ ++ M K + T++ +I++F G + E ++M G+ DT T+ LI+G
Sbjct: 416 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 475
Query: 401 YANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
+ K V L N+ +N +I+ KA+ + + ++++M + D
Sbjct: 476 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVAD 535
Query: 461 SETFSIMTEAYAKEGMNDKVYALEQE 486
+ T++ + + + + G + L QE
Sbjct: 536 TVTYNTLIQGFCELGKLNVAKELFQE 561
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 111/258 (43%), Gaps = 2/258 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ K + A ++ + MV +G +P + L+ YC+ + ID+
Sbjct: 464 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 523
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+M +L D TY+TLI+ + + + + L+Q+M R V PN VT I+L G
Sbjct: 524 FRKM-SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC 582
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
G ++ + +E + + D+ N I+ N +VD + G+ P
Sbjct: 583 DNGESEKALEIFE-KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGV 641
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+T+NI+IG KK + + M + TYN +I A GDA E+
Sbjct: 642 KTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEE 701
Query: 382 MHAEGMKADTKTFCCLIN 399
+ G D T +I+
Sbjct: 702 LKRCGFSVDASTIKMVID 719
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 139/320 (43%), Gaps = 8/320 (2%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A +F +M+ PT ++ L +A + D QM+ L ++YT S +I
Sbjct: 170 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQME-LKGIAHNLYTLSIMI 228
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
+ L + + + PNT+T + ++ G G + ++ M+E
Sbjct: 229 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH- 287
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
KPD+ T+NT+++ G+ +K +G P T+ ++ K + +
Sbjct: 288 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS---GQTAL 344
Query: 343 VMEYMRKLQ---FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
ME +RK++ + Y+ +I+ G + F +M +G+ + T+ LI
Sbjct: 345 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 404
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
G+ NAG + +R K +I NV ++ +I + +K L E E ++K M + P
Sbjct: 405 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 464
Query: 460 DSETFSIMTEAYAKEGMNDK 479
D+ T++ + + + KE DK
Sbjct: 465 DTITYTSLIDGFCKENHLDK 484
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 152/340 (44%), Gaps = 2/340 (0%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y+P TY LL + GK+G A V EM E Y L+AAY R EA
Sbjct: 312 YEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAA 371
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+ +M T P+ TY+T+I A A + + L+ M E PNT T N VL
Sbjct: 372 GVI-EMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSL 430
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
GK ++M ++L M +S C P+ T NT+L++ NKG + R + + ++ G +P
Sbjct: 431 LGKKSRSNEMIKMLCDM-KSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEP 489
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ TFN LI AYG+ S + M + F +TYN ++ A + GD + E
Sbjct: 490 DRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVI 549
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
M ++G K ++ ++ YA G + + + QI + ++ A K
Sbjct: 550 SDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKC 609
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
L ER + K+ +PD F+ M + + M D+
Sbjct: 610 RALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQ 649
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 143/334 (42%), Gaps = 2/334 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ +L L G G + +VF EM G EP + + L++AY R +A
Sbjct: 454 PNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKM 513
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+M T V TY+ L+ A + E + DM + P + +++L Y
Sbjct: 514 YGEM-TRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYA 572
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G + +ER+ ++ P + T+L + ER + F+ G P+
Sbjct: 573 KGGNYLGIERI-ENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDM 631
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
FN ++ + + MYD+ ++E +R+ TYN++++ + G+ E +
Sbjct: 632 VIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKT 691
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
+ +K D ++ +I G+ GL + + + ++ I + YN +S
Sbjct: 692 LEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGM 751
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
E+E V + M + CRP+ TF ++ + Y + G
Sbjct: 752 FAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAG 785
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 131/270 (48%), Gaps = 6/270 (2%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
DV Y+T++ A ++E L++ M E +P VT N++L +GK G + R +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMG---RSWRKI 265
Query: 274 SGMLE---SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
G+L+ S K D +T +T+LS A +G + + ++ + ++ G +P T T+N L+
Sbjct: 266 LGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQV 325
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
+GK +Y + SV++ M + P S TYN ++ A+ G +K E M +G+ +
Sbjct: 326 FGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPN 385
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
T+ +I+ Y AG + + + N YNAV+S K EM ++
Sbjct: 386 AITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLC 445
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
MK C P+ T++ M +GM+ V
Sbjct: 446 DMKSNGCSPNRATWNTMLALCGNKGMDKFV 475
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 155/393 (39%), Gaps = 52/393 (13%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A V EM+ ++ P TY ++ GK+G+ + A K+F M E G P Y A+
Sbjct: 369 EAAGVIEMMTKKGV-MPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAV 427
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L+ + S +E L MK+ C P+ T++T++ C + + + ++++M
Sbjct: 428 LSLLGKKSRSNEMIKMLCDMKS-NGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCG 486
Query: 246 VTPNTVTQNIVLGGYGKAG-------MFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
P+ T N ++ YG+ G M+ +M R A V T N +L+ A
Sbjct: 487 FEPDRDTFNTLISAYGRCGSEVDASKMYGEMTR--------AGFNACVTTYNALLNALAR 538
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ-FP-W-- 354
KG E ++ G P ++++++ Y K Y + + +++ Q FP W
Sbjct: 539 KGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWML 598
Query: 355 -------------------------------TSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
+N+++ F+ E E +
Sbjct: 599 LRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIR 658
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
+G+ D T+ L++ Y G K ++ K Q+ ++ YN VI + +
Sbjct: 659 EDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQ 718
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
E R+ M E+ RP T++ Y GM
Sbjct: 719 EAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGM 751
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QA + E ++E P TY L+ + + G+ A ++ + + ++P Y +
Sbjct: 649 QAEGILESIREDGL-SPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTV 707
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +CR L+ EA L++M T +P ++TY+T + F IE + + M +
Sbjct: 708 IKGFCRRGLMQEAVRMLSEM-TERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKND 766
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQ 268
PN +T +V+ GY +AG + +
Sbjct: 767 CRPNELTFKMVVDGYCRAGKYSE 789
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 180/414 (43%), Gaps = 37/414 (8%)
Query: 110 TVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNE 169
TV+ + LK + +AL + + + E F QP E TY +L L KSG LA +F +
Sbjct: 206 TVSTLINGLCLKGRVSEALVLIDRMVEYGF-QPDEVTYGPVLNRLCKSGNSALALDLFRK 264
Query: 170 MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM------------------------ 205
M E I+ + Y+ ++ + C++ D+A N+M
Sbjct: 265 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 324
Query: 206 -----KTL-----PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI 255
K L N PDV T+S LI V + + LY +M R + P+T+T N
Sbjct: 325 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 384
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
++ G+ K + ++ M+ S C+PD+ T + +++ + +VD R + + +
Sbjct: 385 LIDGFCKENCLHEANQMFDLMV-SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK 443
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G+ P T T+N L+ + + + + + M P + TY +++ D G+
Sbjct: 444 GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 503
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
FE+M M + +I+G NA S S + +V YN +I
Sbjct: 504 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 563
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY-AKEGMNDKVYALEQEKL 488
K L E + ++++MKE C PD T++I+ A+ G+ V +E+ K+
Sbjct: 564 LCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKV 617
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 146/351 (41%), Gaps = 5/351 (1%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y+P T+ L+ G+ A + + MVE P + L+ C + EA
Sbjct: 165 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 224
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
V +++M QPD TY ++ + L L++ M+ER++ + V +IV+
Sbjct: 225 VLIDRMVEY-GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 283
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K G FD + + M E K DV T ++++ N G+ D + + I P
Sbjct: 284 LCKDGSFDDALSLFNEM-EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 342
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ TF+ LI + K+ + + M + TYN++I+ F F
Sbjct: 343 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 402
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
+ M ++G + D T+ LIN Y A + R S + N YN ++ ++
Sbjct: 403 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 462
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ-EKLQ 489
L + +++ M + P T+ I+ + G +K ALE EK+Q
Sbjct: 463 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK--ALEIFEKMQ 511
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 153/366 (41%), Gaps = 13/366 (3%)
Query: 113 ETFSDHVLKKQWFQALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMV 171
E + ++ + A+ +FE M++ +P P + + +L + ++ Q +L M
Sbjct: 69 ERLRNGIVDIKVNDAIDLFESMIQSRPLPTPID--FNRLCSAVARTKQYDLVLGFCKGME 126
Query: 172 EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMR 230
GIE T ++ YCR + AF L + L +PD T+STL+ C++
Sbjct: 127 LNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKL-GYEPDTITFSTLVNGFCLEGRV 185
Query: 231 FELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMN 290
E + L M E P+ VT + ++ G G + ++ M+E +PD T
Sbjct: 186 SEAV-ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGF-QPDEVTYG 243
Query: 291 TILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
+L+ G + + K I ++I+I + K +D S+ M
Sbjct: 244 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 303
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
TY+++I + G +M + D TF LI+ + G K+
Sbjct: 304 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEG---KL 360
Query: 411 ISSVRLASKL---QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ + L +++ IA + YN++I K + L E +++ M K C PD T+SI+
Sbjct: 361 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 420
Query: 468 TEAYAK 473
+Y K
Sbjct: 421 INSYCK 426
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 120/313 (38%), Gaps = 37/313 (11%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A +F M++ PTP + L +A R D M+ L + D+YT + +I
Sbjct: 83 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGME-LNGIEHDMYTMTIMI 141
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
+ ++ + P+T+T + ++ G+ G + ++ M+E
Sbjct: 142 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ- 200
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
+PD+ T++T+++ KG+V ++ +G P+ T+ ++ K
Sbjct: 201 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 260
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+ M + + Y+ VI++ G F +M +G+KAD T+ LI G
Sbjct: 261 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 320
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
N G K DD +M R M ++ PD
Sbjct: 321 NDG--------------------------------KWDDGAKMLR---EMIGRNIIPDVV 345
Query: 463 TFSIMTEAYAKEG 475
TFS + + + KEG
Sbjct: 346 TFSALIDVFVKEG 358
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 83/203 (40%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P N + S A Q D++ + + GI+ + T I+I Y +K+ SV
Sbjct: 97 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 156
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ KL + + T++ ++ F G ++M + D T LING
Sbjct: 157 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL 216
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
G + + + + + Y V++ K+ + ++++M+E++ +
Sbjct: 217 KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 276
Query: 464 FSIMTEAYAKEGMNDKVYALEQE 486
+SI+ ++ K+G D +L E
Sbjct: 277 YSIVIDSLCKDGSFDDALSLFNE 299
>gi|297737369|emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 168/370 (45%), Gaps = 5/370 (1%)
Query: 119 VLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPT 178
V + W +AL+V+E L + +Y P +L +LGK+ Q LA ++F E T
Sbjct: 138 VGQSSWQRALEVYEWLNLRHWYSPNARMLATILSVLGKANQEALAVEIFAR-AEAASGNT 196
Query: 179 PELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA--MRFELIET 236
++Y A++ Y R + L+ M++ C+PD+ +++TLI A + + M L
Sbjct: 197 VQVYNAMMGVYARTGRFTKVQELLDLMRS-RGCEPDLVSFNTLINARLKSGTMVTNLAIE 255
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
L ++ + P+ +T N ++ + ++ +V + M+ + C+PD+WT N ++SV+
Sbjct: 256 LLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMV-AHRCQPDLWTYNAMISVY 314
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
G R ++ + G P+ T+N L+ A+ ++ DK+ + E M K+ F
Sbjct: 315 GRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDE 374
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
TYN +I + G + M G D T+ LI+ A + + +
Sbjct: 375 MTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSE 434
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
++ + ++A+I KA +E E + M +PD +S+M + +
Sbjct: 435 MLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNE 494
Query: 477 NDKVYALEQE 486
+ K L QE
Sbjct: 495 SGKAMKLYQE 504
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 128/294 (43%), Gaps = 29/294 (9%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
EML + +P T+ L+ K+G+ A + F+ M+ GI+P Y+ +L R
Sbjct: 434 EMLNAR--VKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLR 491
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
+ +A + L Q L + +PD Y +++ R E + + +DM+E + V
Sbjct: 492 FNESGKA-MKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDMEELCGMNSQV 550
Query: 252 TQNIVLGG----------------------YGKA---GMFDQMERVLSGMLESATCKPDV 286
+I++ G YGKA G+F E + G+L S CK D
Sbjct: 551 ICSILVKGECFDHAANMLRLAISQGCELDQYGKARDFGLFCGTEELFEGLL-SKECKLDR 609
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
+ ++ +F N G E+ + G++P T ++L+ +Y ++ V++
Sbjct: 610 SFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDN 669
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
++ P ++ Y++VI+A+ GD +M +G++ D + + C +
Sbjct: 670 LKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRA 723
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/360 (20%), Positives = 140/360 (38%), Gaps = 27/360 (7%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY ++ + G+ G A ++F ++ +G P Y +LL A+ R +D+
Sbjct: 301 QPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKE 360
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
M + D TY+T+I + +L LY DM +P+ VT +++
Sbjct: 361 ICEDMVKM-GFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSL 419
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
GKA M + V+S ML +A KP + T + ++ +A G+ E ++ GI P+
Sbjct: 420 GKANMIKEAAEVMSEML-NARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPD 478
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+++++ + K + + M F + Y ++ + + +
Sbjct: 479 HLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVK 538
Query: 381 QM----------------------HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
M HA M + C ++ Y A F + L
Sbjct: 539 DMEELCGMNSQVICSILVKGECFDHAANMLRLAISQGCELDQYGKARDFGLFCGTEELFE 598
Query: 419 KLQIAE---NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
L E + SFY+ ++ + + + E++ MKE P T ++ +Y+ G
Sbjct: 599 GLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSG 658
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 91/213 (42%), Gaps = 11/213 (5%)
Query: 284 PDVWTMNTILSVFANKGQ----VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
P+ + TILSV Q V++ R N + +N ++G Y + + K
Sbjct: 161 PNARMLATILSVLGKANQEALAVEIFARAEAASGN-----TVQVYNAMMGVYARTGRFTK 215
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD--AKHMEYTFEQMHAEGMKADTKTFCCL 397
+ +++ MR ++N +I A G ++ G++ D T+ L
Sbjct: 216 VQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTL 275
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
I+ + + + + ++ YNA+IS + E R++K ++ K
Sbjct: 276 ISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGF 335
Query: 458 RPDSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
PD+ T++ + A+A+EG DKV + ++ ++M
Sbjct: 336 LPDAVTYNSLLYAFAREGNVDKVKEICEDMVKM 368
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 187/420 (44%), Gaps = 16/420 (3%)
Query: 82 PGYRSKRTPIKNLKKKLERKAKAKAWVNTV------AETFSDHVLKKQWFQALQVFEMLK 135
PG + + +K L K R KAK T+ + S ++L + + +V E +K
Sbjct: 225 PGIVTYNSVLKGLCKH-RRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVK 283
Query: 136 -----EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYC 190
+ + P ++ L+ L + G+ + A EM G+ P +YT ++ +C
Sbjct: 284 FYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFC 343
Query: 191 RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT 250
R + EA ++M C PDV TY+TL+ R E L +M+ER VTP+
Sbjct: 344 RAGSMSEALRVRDEMVGF-GCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDL 402
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYE 310
T ++ GY + G F+ ++ +L +PDV T N+++ KG + ++
Sbjct: 403 CTFTTLIHGYCRQGNFENALQLFDTLLRQRL-RPDVVTYNSLIDGMCRKGDLAKANELWD 461
Query: 311 KFRNFGIDPETRTFNILIGAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
I P T++ILI ++ +K ++ D + E ++K P TYN++I+ +
Sbjct: 462 DMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLP-NIRTYNSIIKGYCRS 520
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFY 429
G+ K + ++M + + D TF LI+GY H + + K + + Y
Sbjct: 521 GNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTY 580
Query: 430 NAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
N +I+ + ++ + RV+K M + PD T+ + + G + + + L E +
Sbjct: 581 NMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIH 640
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 163/400 (40%), Gaps = 40/400 (10%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A + F +L + P + LL +L ++G P LA++ + ++ E +
Sbjct: 105 EAFEAFRLLLDHRVPVPASASN-ALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIM 163
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQ-PDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
+ +YC+ D A +++M+ C PDV T++ LI A A + L M R
Sbjct: 164 VHSYCKTLEFDGADTVISEMEK--RCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANR 221
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ P VT N VL G K FD+ + V M + + PDV + N ++ F G+V
Sbjct: 222 GLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTM-DQCSVAPDVRSFNILIGGFCRVGEVKE 280
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
++Y++ ++ + P+ +F+ LIG + ++ D + + M+ L Y VI
Sbjct: 281 AVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIG 340
Query: 365 AFSDMGDAKHM-----------------------------------EYTFEQMHAEGMKA 389
F G E +M G+
Sbjct: 341 GFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTP 400
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
D TF LI+GY G F + + ++ +V YN++I + DL + ++
Sbjct: 401 DLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELW 460
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
M + P+ T+SI+ +++ ++G + + E ++
Sbjct: 461 DDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVK 500
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 135/334 (40%), Gaps = 9/334 (2%)
Query: 164 RKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIK 223
R++ + ++ P P+++ L+ Y ++ EAF + L + P + S +
Sbjct: 72 REIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLL--LDHRVPVPASASNALL 129
Query: 224 ACVDAMRF-ELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
A + + L + Y+ + N T NI++ Y K FD + V+S M E
Sbjct: 130 AVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEM-EKRCV 188
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
PDV T N ++ G VD + N G+ P T+N ++ K R +DK
Sbjct: 189 FPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKE 248
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
V M + ++N +I F +G+ K +++M + D +F CLI ++
Sbjct: 249 VFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFS 308
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
G + +R L + + Y VI +A + E RV M C PD
Sbjct: 309 RRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVV 368
Query: 463 TFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
T++ + K+ L+ EKL +E G
Sbjct: 369 TYNTLLNGLCKQH-----RLLDAEKLLNEMEERG 397
>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
Length = 838
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 163/361 (45%), Gaps = 2/361 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E TY LL SG E A VF EM + G P+ +Y A + + +A
Sbjct: 131 PTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEI 190
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+MK CQP TY+ LI A + + ++ +M + PN T ++ +
Sbjct: 191 FERMKR-DRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFA 249
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G+ ++ E + L+ A +PDV+ N ++ ++ G + ++ G +P+
Sbjct: 250 REGLCEKAEEIFE-QLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDR 308
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
++NI++ AYG+ +++ +V E M++L T ++ ++ A+S G E Q
Sbjct: 309 ASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQ 368
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
MH G+K DT ++N Y G F K+ + K ++S YN +I+ +A
Sbjct: 369 MHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGF 428
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGHWQQN 501
ME +++ + ++ PD T++ AY++ ++ + +E + G +N
Sbjct: 429 FARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKN 488
Query: 502 I 502
+
Sbjct: 489 V 489
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 134/277 (48%), Gaps = 3/277 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+++FE +K QP TY L+ L GK+ + +A KVF+EM + +P +TAL
Sbjct: 186 KAVEIFERMKRDRC-QPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTAL 244
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A+ R L ++A Q++ +PDVY Y+ L++A A ++ M
Sbjct: 245 VNAFAREGLCEKAEEIFEQLQE-AGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMG 303
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ + NI++ YG+AG+ + + V +++ P + + +LS ++ G+V
Sbjct: 304 CEPDRASYNIMVDAYGRAGLHEDAQAVFE-VMKRLGITPTMKSHMLLLSAYSRAGKVAKC 362
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E + GI P+T N ++ YG+ ++KM V+ M K +P STYN +I
Sbjct: 363 EEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINI 422
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+ G ME F + A + D T+ I Y+
Sbjct: 423 YGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYS 459
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 106/239 (44%), Gaps = 1/239 (0%)
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
S P+ + N+++ YG+ ++ + E +LE A C P T +L + G ++
Sbjct: 93 SFHPDVICYNLLIDAYGQKSLYKKAESTYLELLE-ARCVPTEDTYALLLKAYCTSGLLEK 151
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
E + + R +G P +N I K K + E M++ + +++TY +I
Sbjct: 152 AEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLIN 211
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
+ + F +M ++ K + TF L+N +A GL K + +
Sbjct: 212 LYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEP 271
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+V YNA++ A +A ++ M+ C PD +++IM +AY + G+++ A+
Sbjct: 272 DVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAV 330
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 92/210 (43%)
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+D + + +L ++ PDV N ++ + K E Y + P T+
Sbjct: 78 WDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYA 137
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
+L+ AY + +K +V MRK FP ++ YN I+ GD + FE+M +
Sbjct: 138 LLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRD 197
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
+ T T+ LIN Y A + + + N+ + A+++A + +
Sbjct: 198 RCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKA 257
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
E ++++++E PD ++ + EAY++ G
Sbjct: 258 EEIFEQLQEAGLEPDVYAYNALMEAYSRAG 287
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 6/178 (3%)
Query: 319 PETRTFNILIGAYGKKRMYDKM-SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P+ +N+LI AYG+K +Y K S+ +E + P T TY +++A+ G + E
Sbjct: 96 PDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVP-TEDTYALLLKAYCTSGLLEKAEA 154
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
F +M G + I+G G K + + + + + Y +I+
Sbjct: 155 VFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYG 214
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
KA +V+ M+ + C+P+ TF+ + A+A+EG+ +K +E + L EA
Sbjct: 215 KASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKA----EEIFEQLQEAG 268
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 156/340 (45%), Gaps = 2/340 (0%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL L K G+ +A +V +V G+ PT +Y L+ YC+ ++ AF T QMK+
Sbjct: 346 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS-R 404
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+ +PD TY+ LI A R + L +M + V P T N ++ YG+ G ++
Sbjct: 405 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKC 464
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
VLS M E+ KP+V + +I++ F G++ + + + P + +N +I
Sbjct: 465 FIVLSEMQENGL-KPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIID 523
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
AY + D+ ++E M+ + TYN +I+ + E + +
Sbjct: 524 AYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 583
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
D ++ LI+ G K + + K I V Y+ +IS A L EME +Y
Sbjct: 584 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLY 643
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
++M + + P + +IM EAY+K G K L +E LQ
Sbjct: 644 QKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 683
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 141/342 (41%), Gaps = 2/342 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P +Y ++ + ++G+ A +VF+EM E + P Y ++ + + ++ F
Sbjct: 198 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 257
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+QM +P+ TY+ L+ A R L +M + + P+ T +I+ G
Sbjct: 258 RDQM-VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 316
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G M + L++ D +T + +L+ G+V + E + N G+ P
Sbjct: 317 RNGDSKAMLSLFGKYLKNGVTIGD-YTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 375
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+N LI Y + + S M+ TYN +I + + +
Sbjct: 376 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 435
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G+ +TF LI+ Y G K + + + NV Y ++++A K
Sbjct: 436 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 495
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ E + M K P+++ ++ + +AY + G ND+ + L
Sbjct: 496 IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFIL 537
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 156/397 (39%), Gaps = 44/397 (11%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A++VF+ + E+ P TY ++ K G E ++ ++MV G++P Y LL
Sbjct: 219 AVEVFDEMTERAVL-PNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLL 277
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA---------------------- 224
+ CR + E L++M + PD +TYS L
Sbjct: 278 SGLCRAGRMGETSALLDEMAS-QKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGV 336
Query: 225 --------------CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
C D + + E + Q + + P V N ++ GY + G ++E
Sbjct: 337 TIGDYTCSILLNGLCKDG-KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTG---ELE 392
Query: 271 RVLS--GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
S G ++S KPD T N +++ ++ + + ++ G++P TFN LI
Sbjct: 393 GAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLI 452
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
AYG+ +K V+ M++ +Y +++ AF G + M + +
Sbjct: 453 DAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVL 512
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
+ + + +I+ Y G + V I+ ++ YN +I + E E +
Sbjct: 513 PNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEI 572
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
+ PD+ +++ + A G DK L+Q
Sbjct: 573 INSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQ 609
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 130/329 (39%), Gaps = 1/329 (0%)
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
G+ R+ F + G P + + A + EA L +M P+ ++
Sbjct: 143 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 202
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y+ +I A R ++ +M ER+V PN +T N ++ G+ K G + R+ M+
Sbjct: 203 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 262
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
KP+ T N +LS G++ ++ + + P+ T++IL +
Sbjct: 263 CHGL-KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 321
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
M S+ K T + ++ G E + + G+ + L
Sbjct: 322 KAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTL 381
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
INGY G S+ I + YNA+I+ KA+ + + + M++
Sbjct: 382 INGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGV 441
Query: 458 RPDSETFSIMTEAYAKEGMNDKVYALEQE 486
P ETF+ + +AY + G +K + + E
Sbjct: 442 NPTVETFNTLIDAYGRTGQLEKCFIVLSE 470
>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Glycine max]
Length = 631
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 168/345 (48%), Gaps = 23/345 (6%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ K + + A ++F+EM E G++PT ++YT L+ Y + ++EA
Sbjct: 222 PDTVTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGL 281
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ +M+ C V+TY+ LI+ + R E Y++M + P+ V N ++ G
Sbjct: 282 VKEMRA-RRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILG 340
Query: 262 KAG-------MFDQMERVLSGMLESATCKPDVWTMNTIL-SVFANKGQVDMMERWYEKFR 313
++ +FD+M+ + C P+V T NTI+ S+F K + W+E+ +
Sbjct: 341 RSNHLRDAIKLFDEMKLL--------NCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMK 392
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
GI P + T++ILI Y K +K ++E M + FP + Y ++I + +G AK
Sbjct: 393 KDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLI---NTLGVAK 449
Query: 374 HMEYT---FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYN 430
+ F+++ + + + +I + G ++ I+ KL +V YN
Sbjct: 450 RYDVANELFQELKENCGCSSARVYAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYN 509
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
A+++ ++A+ + E +++ M+E C PD + +I+ A+ G
Sbjct: 510 ALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTG 554
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 113/246 (45%), Gaps = 39/246 (15%)
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKA 224
F M ++GI P+ Y+ L+ YC+ + +++A + L +M K P C Y +LI
Sbjct: 388 FERMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPA---AYCSLINT 444
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------MFDQMERV----- 272
A R+++ L+Q++ E + +++ +GK G +F++M+++
Sbjct: 445 LGVAKRYDVANELFQELKENCGCSSARVYAVMIKHFGKCGRLNEAINLFNEMKKLGCTPD 504
Query: 273 -------LSGM---------------LESATCKPDVWTMNTILSVFANKGQVDMMERWYE 310
++GM +E C PD+ + N IL+ A G +
Sbjct: 505 VYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALEMFT 564
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
K +N I P+ +FN ++G + ++++ + +M+ M F + TY++++EA +
Sbjct: 565 KMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQYDLITYSSILEAVGKVD 624
Query: 371 DAKHME 376
D K +E
Sbjct: 625 DCKMVE 630
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 125/306 (40%), Gaps = 2/306 (0%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y AL+ + + E + T+ M +C S +++ A +++ +
Sbjct: 121 YMALIRCLDEHRMFGEVWKTIQDM-VKGSCAMAPAELSEIVRILGKAKMVNRALSVFYQV 179
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
R P T N ++ + G +++ + + M C PD T + ++S FA +
Sbjct: 180 KGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCSEVHCFPDTVTYSALISAFAKLNR 239
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
D R +++ + G+ P + + L+G Y K ++ +++ MR + T TY
Sbjct: 240 DDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTE 299
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+I G + T++ M +G K D LIN + I L
Sbjct: 300 LIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLN 359
Query: 422 IAENVSFYNAVISACIKAD-DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
A NV YN +I + +A L E ++RMK+ P S T+SI+ + Y K +K
Sbjct: 360 CAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKA 419
Query: 481 YALEQE 486
L +E
Sbjct: 420 LLLLEE 425
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 142/332 (42%), Gaps = 38/332 (11%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY +L+ LGKSG+ E A + M+++G +P L L+ R++ + +A ++M
Sbjct: 296 TYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEM 355
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIE--TLYQDMDERSVTPNTVTQNIVLGGYGKA 263
K L NC P+V TY+T+IK+ +A + L E + ++ M + + P++ T +I++ GY K
Sbjct: 356 KLL-NCAPNVVTYNTIIKSLFEA-KAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKT 413
Query: 264 GMFDQMERVLSGMLESA--TCKPDVWTMNTILSV-------------------------- 295
++ +L M E C ++ L V
Sbjct: 414 NRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARVY 473
Query: 296 ------FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
F G+++ + + + G P+ +N L+ + D+ S+ M +
Sbjct: 474 AVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEE 533
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
+++N ++ + G K F +M +K D +F ++ + AGLF +
Sbjct: 534 NGCTPDINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVSFNTILGCLSRAGLFEE 593
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADD 441
++ S ++ Y++++ A K DD
Sbjct: 594 AAKLMQEMSSKGFQYDLITYSSILEAVGKVDD 625
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 177/385 (45%), Gaps = 4/385 (1%)
Query: 100 RKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQ 159
RK K N V L+++ A++ F +Q Y K ++ L+ LL S
Sbjct: 104 RKFFVKLSPNFVTFVLQSVELREKPEVAVRFFFWAGKQKKYVHKIECHVSLIELLTFSAD 163
Query: 160 PELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYS 219
R VF E+ + G+ T +L+ ++ L++E +MK P +YTY+
Sbjct: 164 LVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKE-NGIDPSLYTYN 222
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ-MERVLSGMLE 278
L+ V++M E E +++ MD + P+TVT NI++ GY KAG + ME+ +E
Sbjct: 223 FLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRD--ME 280
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
KPD T T++ ++ D Y + G++ +++++IG K+R
Sbjct: 281 MKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCM 340
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+ +V E M + + Y +I+++S G + FE+M EG + D T+ L+
Sbjct: 341 EAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLV 400
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
NG +G + +A N FY ++I KA + + E +++ M EK C
Sbjct: 401 NGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCA 460
Query: 459 PDSETFSIMTEAYAKEGMNDKVYAL 483
DS ++ + +A AK G D+ AL
Sbjct: 461 RDSYCYNAIIDALAKHGKIDQALAL 485
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 1/130 (0%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y L+ LGK+G+ E A +F EM E+G Y A++ A ++ ID+A +M+
Sbjct: 431 YASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRME 490
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
C VYT++ LI + E + M ++ +TP + + G G
Sbjct: 491 E-EGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKV 549
Query: 267 DQMERVLSGM 276
+ ++L +
Sbjct: 550 ARACKILDDL 559
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 63/143 (44%)
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
T S N++I++F ++G + + + + +M G+ T+ L+NG N+
Sbjct: 182 TESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVF 241
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
+ +I + YN +I KA L + ++ M+ K+ +PD T+ + +A E
Sbjct: 242 EVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSE 301
Query: 475 GMNDKVYALEQEKLQMLLEASGH 497
D +L E + LE H
Sbjct: 302 RDFDTCLSLYLEMEERGLEIPPH 324
>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 168/370 (45%), Gaps = 5/370 (1%)
Query: 119 VLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPT 178
V + W +AL+V+E L + +Y P +L +LGK+ Q LA ++F E T
Sbjct: 163 VGQSSWQRALEVYEWLNLRHWYSPNARMLATILSVLGKANQEALAVEIFAR-AEAASGNT 221
Query: 179 PELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA--MRFELIET 236
++Y A++ Y R + L+ M++ C+PD+ +++TLI A + + M L
Sbjct: 222 VQVYNAMMGVYARTGRFTKVQELLDLMRS-RGCEPDLVSFNTLINARLKSGTMVTNLAIE 280
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
L ++ + P+ +T N ++ + ++ +V + M+ + C+PD+WT N ++SV+
Sbjct: 281 LLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMV-AHRCQPDLWTYNAMISVY 339
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
G R ++ + G P+ T+N L+ A+ ++ DK+ + E M K+ F
Sbjct: 340 GRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDE 399
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
TYN +I + G + M G D T+ LI+ A + + +
Sbjct: 400 MTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSE 459
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
++ + ++A+I KA +E E + M +PD +S+M + +
Sbjct: 460 MLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNE 519
Query: 477 NDKVYALEQE 486
+ K L QE
Sbjct: 520 SGKAMKLYQE 529
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/369 (18%), Positives = 157/369 (42%), Gaps = 41/369 (11%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A ++F++M G+EP+ LY +++ YC+ + A ++Q + DV ++ +I
Sbjct: 695 ASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHTGVI 754
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
+A ++ E+L + ++ + N ++ Y +G +++ + + M+
Sbjct: 755 EAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRDGP- 813
Query: 283 KPDVWTMNTI-----------------------------------LSVFANKGQVDMMER 307
P V ++N + L FA+ G + +++
Sbjct: 814 SPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKK 873
Query: 308 WYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS 367
Y+ + G P + I+IG K + + +++ M +F S +N+V++ ++
Sbjct: 874 IYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKLYT 933
Query: 368 DMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVS 427
+GD K ++ + G+K D T+ LI Y + +S + ++ + +
Sbjct: 934 GIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLD 993
Query: 428 FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEK 487
Y ++ISA K + + E +++ + K C+ D + IM + + G + K EK
Sbjct: 994 TYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKA-----EK 1048
Query: 488 LQMLLEASG 496
L +++ +G
Sbjct: 1049 LLGVMKEAG 1057
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 141/351 (40%), Gaps = 41/351 (11%)
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL-------- 208
SG E AR +FN M+ +G PT + L+ A + +DE +V + +++ +
Sbjct: 795 SGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSS 854
Query: 209 --------------------------PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
P ++ Y +I R +E + +M+
Sbjct: 855 ITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEME 914
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
P+ N VL Y G F + +V +++ A KPD T NT++ ++ +
Sbjct: 915 VARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQ-LIQEAGLKPDEDTYNTLILMYCRDRRP 973
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ + R G++P+ T+ LI A+GK +M ++ + E + + S Y+ +
Sbjct: 974 EEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIM 1033
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL---FHKVISSVRLASK 419
++ F + G+ E M G++ T L+ Y+ +G KV+ ++++
Sbjct: 1034 MKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEG- 1092
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
+ + Y++VI A +K D + MK+ PD ++ A
Sbjct: 1093 --LPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRA 1141
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 152/389 (39%), Gaps = 39/389 (10%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
EML + +P T+ L+ K+G+ A + F+ M+ GI+P Y+ +L R
Sbjct: 459 EMLNAR--VKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLR 516
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
+ +A + L Q L + +PD Y +++ R E + + +DM+E + V
Sbjct: 517 FNESGKA-MKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDMEELCGMNSQV 575
Query: 252 TQNI-------------------------------VLGGYGKAGMFDQMERVLSGMLESA 280
+I +LG YG +G + +L + E +
Sbjct: 576 ICSILVKGECFDHAANMLRLAISQGCELDRENLLSILGSYGSSGRHLEARELLDFLREHS 635
Query: 281 TCKPDVWTMNTILSVFANKG-QVDMMERWYEKFRNFGIDPETRT-FNILIGAYGKKRMYD 338
+ + +N L + K Q+ R Y K R+FG+ + T + L+ + ++
Sbjct: 636 SGSHQL--INEALIIMLCKAHQLGDALREYGKARDFGLFCGSFTMYESLLLCCEENELFA 693
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK-ADTKTFCCL 397
+ S + MR + Y +++ + MG + Y +Q +G+ D +
Sbjct: 694 EASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHTGV 753
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
I Y L+ K S V + + +NA+I A + ++ M
Sbjct: 754 IEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRDGP 813
Query: 458 RPDSETFSIMTEAYAKEGMNDKVYALEQE 486
P ++ + + +A +G D++Y + QE
Sbjct: 814 SPTVDSVNGLMQALIVDGRLDELYVVIQE 842
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 91/213 (42%), Gaps = 11/213 (5%)
Query: 284 PDVWTMNTILSVFANKGQ----VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
P+ + TILSV Q V++ R N + +N ++G Y + + K
Sbjct: 186 PNARMLATILSVLGKANQEALAVEIFARAEAASGN-----TVQVYNAMMGVYARTGRFTK 240
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD--AKHMEYTFEQMHAEGMKADTKTFCCL 397
+ +++ MR ++N +I A G ++ G++ D T+ L
Sbjct: 241 VQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTL 300
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
I+ + + + + ++ YNA+IS + E R++K ++ K
Sbjct: 301 ISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGF 360
Query: 458 RPDSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
PD+ T++ + A+A+EG DKV + ++ ++M
Sbjct: 361 LPDAVTYNSLLYAFAREGNVDKVKEICEDMVKM 393
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 177/385 (45%), Gaps = 4/385 (1%)
Query: 100 RKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQ 159
RK K N V L+++ A++ F +Q Y K ++ L+ LL S
Sbjct: 106 RKFFVKLSPNFVTFVLQSVELREKPEVAVRFFFWAGKQKKYVHKIECHVSLIELLTFSAD 165
Query: 160 PELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYS 219
R VF E+ + G+ T +L+ ++ L++E +MK P +YTY+
Sbjct: 166 LVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKE-NGIDPSLYTYN 224
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ-MERVLSGMLE 278
L+ V++M E E +++ MD + P+TVT NI++ GY KAG + ME+ +E
Sbjct: 225 FLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRD--ME 282
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
KPD T T++ ++ D Y + G++ +++++IG K+R
Sbjct: 283 MKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCM 342
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+ +V E M + + Y +I+++S G + FE+M EG + D T+ L+
Sbjct: 343 EAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLV 402
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
NG +G + +A N FY ++I KA + + E +++ M EK C
Sbjct: 403 NGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCA 462
Query: 459 PDSETFSIMTEAYAKEGMNDKVYAL 483
DS ++ + +A AK G D+ AL
Sbjct: 463 RDSYCYNAIIDALAKHGKIDQALAL 487
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 1/130 (0%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y L+ LGK+G+ E A +F EM E+G Y A++ A ++ ID+A +M+
Sbjct: 433 YASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRME 492
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
C VYT++ LI + E + M ++ +TP + + G G
Sbjct: 493 E-EGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKV 551
Query: 267 DQMERVLSGM 276
+ ++L +
Sbjct: 552 ARACKILDDL 561
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 63/143 (44%)
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
T S N++I++F ++G + + + + +M G+ T+ L+NG N+
Sbjct: 184 TESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVF 243
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
+ +I + YN +I KA L + ++ M+ K+ +PD T+ + +A E
Sbjct: 244 EVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSE 303
Query: 475 GMNDKVYALEQEKLQMLLEASGH 497
D +L E + LE H
Sbjct: 304 RDFDTCLSLYLEMEERGLEIPPH 326
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 167/370 (45%), Gaps = 5/370 (1%)
Query: 119 VLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPT 178
V + W +AL+V+E L + +Y P +L +LGK+ Q LA ++F E T
Sbjct: 195 VGQSSWQRALEVYEWLNLRHWYSPNARMLATILSVLGKANQEALAVEIFAR-AEAAXGNT 253
Query: 179 PELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA--MRFELIET 236
++Y A++ Y R + L+ M++ C+PD+ +++TLI A + + M L
Sbjct: 254 VQVYNAMMGVYARTGRFTKVQELLDLMRS-RGCEPDLVSFNTLINARLKSGTMVTNLAIE 312
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
L ++ + P+ +T N ++ + ++ +V + M+ + C+PD+WT N ++SV+
Sbjct: 313 LLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMV-AHRCQPDLWTYNAMISVY 371
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
G R ++ + G P+ T+N L+ A+ ++ DK+ + E M K+ F
Sbjct: 372 GRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDE 431
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
TYN +I + G + M G D T+ LI+ A + + +
Sbjct: 432 MTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSE 491
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ + ++A+I KA +E E + M +PD +S+M + +
Sbjct: 492 MLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNE 551
Query: 477 NDKVYALEQE 486
+ K L QE
Sbjct: 552 SGKAMKLYQE 561
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/369 (18%), Positives = 156/369 (42%), Gaps = 41/369 (11%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A ++F++M G+EP+ LY +++ YC+ + A ++Q + DV ++ +I
Sbjct: 727 ASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHTGVI 786
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
+A ++ E+L + ++ + N ++ Y +G +++ + + M+
Sbjct: 787 EAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRDGP- 845
Query: 283 KPDVWTMNTI-----------------------------------LSVFANKGQVDMMER 307
P V ++N + L FA+ G + +++
Sbjct: 846 SPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKK 905
Query: 308 WYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS 367
Y+ + G P + I+IG K + + +++ M F S +N+V++ ++
Sbjct: 906 IYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYT 965
Query: 368 DMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVS 427
+GD K ++ + G+K D T+ LI Y + +S + ++ + +
Sbjct: 966 GIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLD 1025
Query: 428 FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEK 487
Y ++ISA K + + E +++ + K C+ D + IM + + G + K EK
Sbjct: 1026 TYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKA-----EK 1080
Query: 488 LQMLLEASG 496
L +++ +G
Sbjct: 1081 LLGVMKEAG 1089
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 141/351 (40%), Gaps = 41/351 (11%)
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL-------- 208
SG E AR +FN M+ +G PT + L+ A + +DE +V + +++ +
Sbjct: 827 SGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSS 886
Query: 209 --------------------------PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
P ++ Y +I R +E + +M+
Sbjct: 887 ITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEME 946
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
P+ N VL Y G F + +V +++ A KPD T NT++ ++ +
Sbjct: 947 VAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQ-LIQEAGLKPDEDTYNTLILMYCRDRRP 1005
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ + R G++P+ T+ LI A+GK +M ++ + E + + S Y+ +
Sbjct: 1006 EEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIM 1065
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL---FHKVISSVRLASK 419
++ F + G+ E M G++ T L+ Y+ +G KV+ ++++
Sbjct: 1066 MKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEG- 1124
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
+ + Y++VI A +K D + MK+ PD ++ A
Sbjct: 1125 --LPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRA 1173
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 75/380 (19%), Positives = 148/380 (38%), Gaps = 37/380 (9%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P T+ L+ K+G+ A + F+ M+ GI+P Y+ +L R + +A +
Sbjct: 498 KPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKA-M 556
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI----- 255
L Q L + +PD Y +++ R E + + +DM+E + V +I
Sbjct: 557 KLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDMEELCGMNSQVICSILVKGE 616
Query: 256 --------------------------VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM 289
+LG YG +G + +L + E ++ + +
Sbjct: 617 CFDHAANMLRLAISQGCELDRENLLSILGSYGSSGRHLEARELLDFLREHSSGSHQL--I 674
Query: 290 NTILSVFANKG-QVDMMERWYEKFRNFGIDPETRT-FNILIGAYGKKRMYDKMSSVMEYM 347
N L + K Q+ R Y K R+FG+ + T + L+ + ++ + S + M
Sbjct: 675 NEALIIMLCKAHQLGDALREYGKARDFGLFCGSFTMYESLLLCCEENELFAEASQIFSDM 734
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK-ADTKTFCCLINGYANAGL 406
R + Y +++ + MG + Y +Q +G+ D +I Y L
Sbjct: 735 RFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHTGVIEAYGKLKL 794
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ K S V + + +NA+I A + ++ M P ++ +
Sbjct: 795 WQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNG 854
Query: 467 MTEAYAKEGMNDKVYALEQE 486
+ +A +G D++Y + QE
Sbjct: 855 LMQALIVDGRLDELYVVIQE 874
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 91/213 (42%), Gaps = 11/213 (5%)
Query: 284 PDVWTMNTILSVFANKGQ----VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
P+ + TILSV Q V++ R N + +N ++G Y + + K
Sbjct: 218 PNARMLATILSVLGKANQEALAVEIFARAEAAXGN-----TVQVYNAMMGVYARTGRFTK 272
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD--AKHMEYTFEQMHAEGMKADTKTFCCL 397
+ +++ MR ++N +I A G ++ G++ D T+ L
Sbjct: 273 VQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTL 332
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
I+ + + + + ++ YNA+IS + E R++K ++ K
Sbjct: 333 ISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGF 392
Query: 458 RPDSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
PD+ T++ + A+A+EG DKV + ++ ++M
Sbjct: 393 LPDAVTYNSLLYAFAREGNVDKVKEICEDMVKM 425
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 180/414 (43%), Gaps = 37/414 (8%)
Query: 110 TVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNE 169
TV+ + LK + +AL + + + E F QP E TY +L L KSG LA +F +
Sbjct: 177 TVSTLINGLCLKGRVSEALVLIDRMVEYGF-QPDEVTYGPVLNRLCKSGNSALALDLFRK 235
Query: 170 MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM------------------------ 205
M E I+ + Y+ ++ + C++ D+A N+M
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295
Query: 206 -----KTL-----PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI 255
K L N PDV T+S LI V + + LY +M R + P+T+T N
Sbjct: 296 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 355
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
++ G+ K + ++ M+ S C+PD+ T + +++ + +VD R + + +
Sbjct: 356 LIDGFCKENCLHEANQMFDLMV-SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK 414
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G+ P T T+N L+ + + + + + M P + TY +++ D G+
Sbjct: 415 GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 474
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
FE+M M + +I+G NA S S + +V YN +I
Sbjct: 475 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 534
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY-AKEGMNDKVYALEQEKL 488
K L E + ++++MKE C PD T++I+ A+ G+ V +E+ K+
Sbjct: 535 LCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKV 588
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 153/406 (37%), Gaps = 72/406 (17%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y+P T+ L+ G+ A + + MVE P + L+ C + EA
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 195
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
V +++M QPD TY ++ + L L++ M+ER++ + V +IV+
Sbjct: 196 VLIDRMVEY-GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 254
Query: 260 YGKAGMFDQMERVLSGM--------------LESATCK--------------------PD 285
K G FD + + M L C PD
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN-------------------- 325
V T + ++ VF +G++ + Y + GI P+T T+N
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374
Query: 326 ---------------ILIGAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
ILI +Y K KR+ D M E K P T TYN ++ F
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT-ITYNTLVLGFCQS 433
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFY 429
G + F++M + G+ T+ L++G + G +K + K ++ + Y
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493
Query: 430 NAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
N +I A + + ++ + +K +PD T+++M K+G
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKG 539
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 153/366 (41%), Gaps = 13/366 (3%)
Query: 113 ETFSDHVLKKQWFQALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMV 171
E + ++ + A+ +FE M++ +P P + + +L + ++ Q +L M
Sbjct: 40 ERLRNGIVDIKVNDAIDLFESMIQSRPLPTPID--FNRLCSAVARTKQYDLVLGFCKGME 97
Query: 172 EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMR 230
GIE T ++ YCR + AF L + L +PD T+STL+ C++
Sbjct: 98 LNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGY-EPDTITFSTLVNGFCLEGRV 156
Query: 231 FELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMN 290
E + L M E P+ VT + ++ G G + ++ M+E +PD T
Sbjct: 157 SEAV-ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGF-QPDEVTYG 214
Query: 291 TILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
+L+ G + + K I ++I+I + K +D S+ M
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
TY+++I + G +M + D TF LI+ + G K+
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEG---KL 331
Query: 411 ISSVRLASKL---QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ + L +++ IA + YN++I K + L E +++ M K C PD T+SI+
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 391
Query: 468 TEAYAK 473
+Y K
Sbjct: 392 INSYCK 397
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 120/313 (38%), Gaps = 37/313 (11%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A +F M++ PTP + L +A R D M+ L + D+YT + +I
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGME-LNGIEHDMYTMTIMI 112
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
+ ++ + P+T+T + ++ G+ G + ++ M+E
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ- 171
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
+PD+ T++T+++ KG+V ++ +G P+ T+ ++ K
Sbjct: 172 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 231
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+ M + + Y+ VI++ G F +M +G+KAD T+ LI G
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
N G K DD +M R M ++ PD
Sbjct: 292 NDG--------------------------------KWDDGAKMLR---EMIGRNIIPDVV 316
Query: 463 TFSIMTEAYAKEG 475
TFS + + + KEG
Sbjct: 317 TFSALIDVFVKEG 329
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 83/203 (40%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P N + S A Q D++ + + GI+ + T I+I Y +K+ SV
Sbjct: 68 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 127
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ KL + + T++ ++ F G ++M + D T LING
Sbjct: 128 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL 187
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
G + + + + + Y V++ K+ + ++++M+E++ +
Sbjct: 188 KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247
Query: 464 FSIMTEAYAKEGMNDKVYALEQE 486
+SI+ ++ K+G D +L E
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNE 270
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 165/344 (47%), Gaps = 4/344 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY ++ L K G+P+LA + N+M + IE +Y+ ++ + C+ +D+A
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALN 261
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M +PDV+TYS+LI + R+ L DM ER + PN VT N ++ +
Sbjct: 262 LFTEMDN-KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAF 320
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + E++ M++ + P++ T N++++ F ++D ++ + + P+
Sbjct: 321 AKEGKLIEAEKLFDEMIQRSI-DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Query: 321 TRTFNILIGAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
T+N LI + K K++ D M + R+ + TY +I F D + + F
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRR-GLVGNTVTYTTLIHGFFQASDCDNAQMVF 438
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
+QM ++G+ + T+ L++G G K + K ++ ++ YN + KA
Sbjct: 439 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKA 498
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ + ++ + K +PD ++ M + K+G+ ++ Y L
Sbjct: 499 GKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 147/367 (40%), Gaps = 41/367 (11%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY ++ L + Q A + +M++ G P+ +LL +C + I EA ++QM
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG- 264
+ QPD T++TL+ + L + M + P+ VT V+ G K G
Sbjct: 162 VEM-GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 265 ------MFDQMER-------VLSGMLESATCK--------------------PDVWTMNT 291
+ ++ME+ V+ + + CK PDV+T ++
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
++S N G+ R I+P TFN LI A+ K+ + + + M +
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
TYN++I F + F M ++ D T+ LING+ A KV+
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA---KKVV 397
Query: 412 SSVRL---ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ L S+ + N Y +I +A D + V+K+M P+ T++ +
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Query: 469 EAYAKEG 475
+ K G
Sbjct: 458 DGLCKNG 464
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 128/307 (41%), Gaps = 38/307 (12%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W A ++ + E+ P T+ L+ K G+ A K+F+EM++ I+P Y
Sbjct: 290 RWSDASRLLSDMLERKI-NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 348
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
+L+ +C + +DEA M + +C PDV TY+TLI A + L++DM
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVS-KDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMS 407
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
R + NTVT ++ G+ +A D + V M+ P++ T NT+L G++
Sbjct: 408 RRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV-HPNIMTYNTLLDGLCKNGKL 466
Query: 303 DMMERWYEKFRNFGIDPETRTFNIL----------------------------------- 327
+ +E + ++P+ T+NI+
Sbjct: 467 EKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTM 526
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
I + KK + ++ ++ M++ S TYN +I A GD ++M +
Sbjct: 527 ISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRF 586
Query: 388 KADTKTF 394
D T+
Sbjct: 587 AGDASTY 593
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 130/306 (42%), Gaps = 19/306 (6%)
Query: 191 RNSLI----DEAFVTLNQM-KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
RN+L+ DEA +M K+ P P + +S L+ A +F+L+ + + M+
Sbjct: 38 RNALLHLKLDEAVDLFGEMVKSRP--FPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILG 95
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
V+ N T NI++ + +L M++ P + T+N++L+ F + ++
Sbjct: 96 VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGY-GPSIVTLNSLLNGFCHGNRISEA 154
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++ G P+T TF L+ + + +++E M TY VI
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---I 422
G+ +M ++AD + +I+ + V ++ L +++ I
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK---YRHVDDALNLFTEMDNKGI 271
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
+V Y+++IS + R+ M E+ P+ TF+ + +A+AKEG
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK-----L 326
Query: 483 LEQEKL 488
+E EKL
Sbjct: 327 IEAEKL 332
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 176/400 (44%), Gaps = 22/400 (5%)
Query: 107 WVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKV 166
+VN + + +DHV AL+V +++ ++ + P TY ++ L K+GQ E A+ +
Sbjct: 292 FVNGLCQ--NDHV-----GHALKVMDVMVQEG-HDPDVFTYNIVVNCLCKNGQLEEAKGI 343
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
N+MV+ G P + L+AA C + ++EA + L + T+ PDVYT++ LI A
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEA-LDLARQVTVKGVSPDVYTFNILINALC 402
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
L L+++M TP+ VT N ++ G + +L M ES C
Sbjct: 403 KVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM-ESTGCPRST 461
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
T NTI+ K +++ E +++ GI TFN LI K + D ++
Sbjct: 462 ITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQ 521
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M + TYN+++ + GD K E M A G + D T+ LING AG
Sbjct: 522 MISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGR 581
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ +R + YN V+ + + +++ + +++ M E PD+ T+ I
Sbjct: 582 TQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKI 641
Query: 467 MTEAYAKEG------------MNDKVYALEQEKLQMLLEA 494
+ + G M DK + E +ML E
Sbjct: 642 VFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 681
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 148/354 (41%), Gaps = 10/354 (2%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL++ + + P Y +++ LG G +L + + EM EG + + + L
Sbjct: 57 ALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFL 116
Query: 187 AAYCRNSLIDEAF-VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+Y L D+A + LNQ++ L Q D Y+ L+ V+ + +L+E++Y +M R
Sbjct: 117 DSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARG 176
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK---PDVWTMNTILSVFANKGQV 302
+ P+ VT N ++ +A R MLE + + PD T T++ F +G +
Sbjct: 177 IKPDVVTFNTLMKALCRA----HQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSI 232
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ R + G T N+LI Y K R+ D + + + + F TYN
Sbjct: 233 EAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD-GFEPDQITYNT 291
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+ H + M EG D T+ ++N G + +
Sbjct: 292 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+++ +N +I+A + L E + +++ K PD TF+I+ A K G
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 405
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 165/413 (39%), Gaps = 45/413 (10%)
Query: 111 VAETFSDHVLKKQWFQALQVFEMLKEQPFY--QPKEGTYMKLLVLLGKSGQPELARKVFN 168
V +F D +Q F + + QP + Q Y LL +L + + +L V++
Sbjct: 111 VVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYS 170
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
EM GI+P + L+ A CR + A + L +M + PD T++TL++ V+
Sbjct: 171 EMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSS-RGVAPDETTFTTLMQGFVEE 229
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF-----------------DQME- 270
E + M E + VT N+++ GY K G DQ+
Sbjct: 230 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITY 289
Query: 271 -----------------RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
+V+ M++ PDV+T N +++ GQ++ + +
Sbjct: 290 NTFVNGLCQNDHVGHALKVMDVMVQEGH-DPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 348
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS---TYNNVIEAFSDMG 370
+ G P+ TFN LI A +++ ++ R++ S T+N +I A +G
Sbjct: 349 DRGCLPDITTFNTLIAALCTG---NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 405
Query: 371 DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYN 430
D FE+M G D T+ LI+ + G K + ++ + YN
Sbjct: 406 DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYN 465
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+I K + E E V+ +M + ++ TF+ + + K+ D + L
Sbjct: 466 TIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGL 518
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 95/226 (42%), Gaps = 9/226 (3%)
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
D R+L+ L P I+ G +D+M+ + R G + +
Sbjct: 55 DAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHS 114
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST--YNNVIEAFSDMGDAKHMEYTFEQMHA 384
+ +Y ++++D ++ + F + T YN+++ + K +E + +M A
Sbjct: 115 FLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGA 174
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADD 441
G+K D TF L+ A H+V ++V + ++ +A + + + ++ ++
Sbjct: 175 RGIKPDVVTFNTLMKALCRA---HQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGS 231
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALEQE 486
+ RV RM E C T +++ Y K G + D + ++QE
Sbjct: 232 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQE 277
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 175/400 (43%), Gaps = 22/400 (5%)
Query: 107 WVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKV 166
+VN + + +DHV AL+V +++ ++ + P TY ++ L K+GQ E A+ +
Sbjct: 292 FVNGLCQ--NDHV-----GHALKVMDVMVQEG-HDPDVFTYNIVVNCLCKNGQLEEAKGI 343
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
N+MV+ G P + L+AA C + ++EA L + T+ PDVYT++ LI A
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEAL-DLARQVTVKGVSPDVYTFNILINALC 402
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
L L+++M TP+ VT N ++ G + +L M ES C
Sbjct: 403 KVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM-ESTGCPRST 461
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
T NTI+ K +++ E +++ GI TFN LI K + D ++
Sbjct: 462 ITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQ 521
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M + TYN+++ + GD K E M A G + D T+ LING AG
Sbjct: 522 MISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGR 581
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ +R + YN V+ + + +++ + +++ M E PD+ T+ I
Sbjct: 582 TQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKI 641
Query: 467 MTEAYAKEG------------MNDKVYALEQEKLQMLLEA 494
+ + G M DK + E +ML E
Sbjct: 642 VFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 681
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 148/354 (41%), Gaps = 10/354 (2%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL++ + + P Y +++ LG G +L + + EM EG + + + L
Sbjct: 57 ALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFL 116
Query: 187 AAYCRNSLIDEAF-VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+Y L D+A + LNQ++ L Q D Y+ L+ V+ + +L+E++Y +M R
Sbjct: 117 DSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARG 176
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK---PDVWTMNTILSVFANKGQV 302
+ P+ VT N ++ +A R MLE + + PD T T++ F +G +
Sbjct: 177 IKPDVVTFNTLMKALCRA----HQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSI 232
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ R + G T N+LI Y K R+ D + + + + F TYN
Sbjct: 233 EAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD-GFEPDQITYNT 291
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+ H + M EG D T+ ++N G + +
Sbjct: 292 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+++ +N +I+A + L E + +++ K PD TF+I+ A K G
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 405
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 165/413 (39%), Gaps = 45/413 (10%)
Query: 111 VAETFSDHVLKKQWFQALQVFEMLKEQPFY--QPKEGTYMKLLVLLGKSGQPELARKVFN 168
V +F D +Q F + + QP + Q Y LL +L + + +L V++
Sbjct: 111 VVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYS 170
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
EM GI+P + L+ A CR + A + L +M + PD T++TL++ V+
Sbjct: 171 EMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSS-RGVAPDETTFTTLMQGFVEE 229
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF-----------------DQME- 270
E + M E + VT N+++ GY K G DQ+
Sbjct: 230 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITY 289
Query: 271 -----------------RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
+V+ M++ PDV+T N +++ GQ++ + +
Sbjct: 290 NTFVNGLCQNDHVGHALKVMDVMVQEGH-DPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 348
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS---TYNNVIEAFSDMG 370
+ G P+ TFN LI A +++ ++ R++ S T+N +I A +G
Sbjct: 349 DRGCLPDITTFNTLIAALCTG---NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 405
Query: 371 DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYN 430
D FE+M G D T+ LI+ + G K + ++ + YN
Sbjct: 406 DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYN 465
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+I K + E E V+ +M + ++ TF+ + + K+ D + L
Sbjct: 466 TIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFEL 518
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 95/226 (42%), Gaps = 9/226 (3%)
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
D R+L+ L P I+ G +D+M+ + R G + +
Sbjct: 55 DAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHS 114
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST--YNNVIEAFSDMGDAKHMEYTFEQMHA 384
+ +Y ++++D ++ + F + T YN+++ + K +E + +M A
Sbjct: 115 FLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGA 174
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADD 441
G+K D TF L+ A H+V ++V + ++ +A + + + ++ ++
Sbjct: 175 RGIKPDVVTFNTLMKALCRA---HQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGS 231
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALEQE 486
+ RV RM E C T +++ Y K G + D + ++QE
Sbjct: 232 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQE 277
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 174/361 (48%), Gaps = 7/361 (1%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
K + A+++F+ + + F P TY ++ L K G A ++ +M E+G +P
Sbjct: 154 KAKIIDAVKLFDEIGKMGF-APSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVV 212
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
Y ++ + C++ +EA ++M + +P P+V TYS+++ + + +L+
Sbjct: 213 AYNTVIDSLCKDRRANEAMYFFSEMVDQGIP---PNVVTYSSILHGFCNLGQLNEATSLF 269
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
+ M R+V PNTVT I++ G K GM + RV M E+ +PD +T + ++ +
Sbjct: 270 KQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGV-EPDAYTYSALMDGYCL 328
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
+ Q+D ++ ++ G P R +NILI + K R ++ +++ M + T
Sbjct: 329 QSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVT 388
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
Y+ +++ F G + + F++M + G+ D+ T+ L++G G + ++
Sbjct: 389 YSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQ 448
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ +I ++ YN +I L ++ + K +P T+++M KEG+++
Sbjct: 449 ESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSN 508
Query: 479 K 479
+
Sbjct: 509 E 509
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 144/297 (48%), Gaps = 5/297 (1%)
Query: 109 NTVAETFSDHVLKKQW--FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKV 166
NTV T L K+ +A +VFEM+ E +P TY L+ Q + A+K+
Sbjct: 280 NTVTFTILVDGLCKEGMILEARRVFEMMTENG-VEPDAYTYSALMDGYCLQSQMDEAQKL 338
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
F+ MV +G P+ +Y L+ +C++ ++EA L++M + PD TYSTL++
Sbjct: 339 FDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYD-RDLTPDTVTYSTLMQGFC 397
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
A R ++ + L+++M + P+++T +I+L G K G D+ R+L M ES +P +
Sbjct: 398 QAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKI-EPHI 456
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
N ++ N G+++ + GI P T+ ++I K+ + ++ +
Sbjct: 457 CIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRK 516
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
M S TYN I+ F GD + E+M G AD+ TF L++ +N
Sbjct: 517 MVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDLESN 573
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 166/378 (43%), Gaps = 8/378 (2%)
Query: 94 LKKKLERKAKAKAWV--NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLL 151
L KK+E K V NTV ++ ++ +A+ F + +Q P TY +L
Sbjct: 198 LLKKMEEKGCKPDVVAYNTVIDSLCK---DRRANEAMYFFSEMVDQGI-PPNVVTYSSIL 253
Query: 152 VLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNC 211
GQ A +F +M+ + P +T L+ C+ +I EA +M T
Sbjct: 254 HGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVF-EMMTENGV 312
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
+PD YTYS L+ + + + L+ M + P+ NI++ G+ K+ ++ +
Sbjct: 313 EPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKT 372
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+LS M + PD T +T++ F G+ + ++ +++ ++G+ P++ T++IL+
Sbjct: 373 LLSEMYDRDL-TPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGL 431
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
K D+ +++ M++ + YN +I+ + G + F + +G++
Sbjct: 432 CKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSV 491
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
T+ +I+G GL ++ R N YN I ++ D R+ +
Sbjct: 492 VTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEE 551
Query: 452 MKEKHCRPDSETFSIMTE 469
M + DS TF ++ +
Sbjct: 552 MVGRGFSADSSTFQMLLD 569
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 150/377 (39%), Gaps = 43/377 (11%)
Query: 107 WVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKV 166
+N + + DHV F AL +M K QP T+ LL L + A K+
Sbjct: 110 LINCLCHSNRDHV--HFAFSALG--KMFKLG--LQPTHVTFGTLLNGLCSKAKIIDAVKL 163
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
F+E+ + G P+ YT ++ C+ A L +M+ C+PDV Y+T+I +
Sbjct: 164 FDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEE-KGCKPDVVAYNTVIDSLC 222
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
R + +M ++ + PN VT + +L G+ G ++ + M+ P+
Sbjct: 223 KDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMI-GRNVMPNT 281
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
T ++ +G + R +E G++P+ T++ L+ Y + D+ + +
Sbjct: 282 VTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDI 341
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M F + YN +I + +M+ + DT T+ L+ G+ AG
Sbjct: 342 MVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAG- 400
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ Q+A+ +++K M PDS T+SI
Sbjct: 401 ------------RPQVAQ----------------------KLFKEMCSYGLLPDSITYSI 426
Query: 467 MTEAYAKEGMNDKVYAL 483
+ + K G D+ + L
Sbjct: 427 LLDGLCKHGHLDEAFRL 443
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/303 (19%), Positives = 123/303 (40%), Gaps = 8/303 (2%)
Query: 187 AAYCRN----SLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
+C N + +A + NQ+ + P V ++ L+ + V + + +L + MD
Sbjct: 38 GGFCSNYNNLHSVADAVASFNQLLGIRP-LPPVVVFNKLLGSLVKKKHYSTVISLCKQMD 96
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS--GMLESATCKPDVWTMNTILSVFANKG 300
++ PN T I++ + D + S G + +P T T+L+ +K
Sbjct: 97 LSNIRPNVYTLTILINCLCHSNR-DHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKA 155
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
++ + +++ G P T+ +I K +++ M + YN
Sbjct: 156 KIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYN 215
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
VI++ A Y F +M +G+ + T+ +++G+ N G ++ S +
Sbjct: 216 TVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGR 275
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+ N + ++ K ++E RV++ M E PD+ T+S + + Y + D+
Sbjct: 276 NVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEA 335
Query: 481 YAL 483
L
Sbjct: 336 QKL 338
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 175/400 (43%), Gaps = 22/400 (5%)
Query: 107 WVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKV 166
+VN + + +DHV AL+V +++ ++ + P TY ++ L K+GQ E A+ +
Sbjct: 292 FVNGLCQ--NDHV-----GHALKVMDVMVQEG-HDPDVFTYNIVVNCLCKNGQLEEAKGI 343
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
N+MV+ G P + L+AA C + ++EA L + T+ PDVYT++ LI A
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEAL-DLARQVTVKGVSPDVYTFNILINALC 402
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
L L+++M TP+ VT N ++ G + +L M ES C
Sbjct: 403 KVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM-ESTGCPRST 461
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
T NTI+ K +++ E +++ GI TFN LI K + D ++
Sbjct: 462 ITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQ 521
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M + TYN+++ + GD K E M A G + D T+ LING AG
Sbjct: 522 MISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGR 581
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ +R + YN V+ + + +++ + +++ M E PD+ T+ I
Sbjct: 582 TQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKI 641
Query: 467 MTEAYAKEG------------MNDKVYALEQEKLQMLLEA 494
+ + G M DK + E +ML E
Sbjct: 642 VFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 681
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 143/341 (41%), Gaps = 10/341 (2%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+ P Y +++ LG G +L + + EM EG + + + L +Y L D+A
Sbjct: 70 FAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAV 129
Query: 200 -VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
+ LNQ++ L Q D Y+ L+ V+ + +L+E++Y +M R + P+ VT N ++
Sbjct: 130 DLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMK 189
Query: 259 GYGKAGMFDQMERVLSGMLESATCK---PDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
+A R MLE + + PD T T++ F +G ++ R +
Sbjct: 190 ALCRA----HQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEM 245
Query: 316 GIDPETRTFNILIGAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKH 374
G T N+LI Y K R+ D + + + + F TYN + H
Sbjct: 246 GCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGH 304
Query: 375 MEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVIS 434
+ M EG D T+ ++N G + + +++ +N +I+
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 364
Query: 435 ACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
A + L E + +++ K PD TF+I+ A K G
Sbjct: 365 ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 405
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 165/413 (39%), Gaps = 45/413 (10%)
Query: 111 VAETFSDHVLKKQWFQALQVFEMLKEQPFY--QPKEGTYMKLLVLLGKSGQPELARKVFN 168
V +F D +Q F + + QP + Q Y LL +L + + +L V++
Sbjct: 111 VVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYS 170
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
EM GI+P + L+ A CR + A + L +M + PD T++TL++ V+
Sbjct: 171 EMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSS-RGVAPDETTFTTLMQGFVEE 229
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF-----------------DQME- 270
E + M E + VT N+++ GY K G DQ+
Sbjct: 230 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITY 289
Query: 271 -----------------RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
+V+ M++ PDV+T N +++ GQ++ + +
Sbjct: 290 NTFVNGLCQNDHVGHALKVMDVMVQEGH-DPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 348
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS---TYNNVIEAFSDMG 370
+ G P+ TFN LI A +++ ++ R++ S T+N +I A +G
Sbjct: 349 DRGCLPDITTFNTLIAALCTG---NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 405
Query: 371 DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYN 430
D FE+M G D T+ LI+ + G K + ++ + YN
Sbjct: 406 DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYN 465
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+I K + E E V+ +M + ++ TF+ + + K+ D + L
Sbjct: 466 TIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFEL 518
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 95/226 (42%), Gaps = 9/226 (3%)
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
D R+L+ L P I+ G +D+M+ + R G + +
Sbjct: 55 DAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHS 114
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST--YNNVIEAFSDMGDAKHMEYTFEQMHA 384
+ +Y ++++D ++ + F + T YN+++ + K +E + +M A
Sbjct: 115 FLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGA 174
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADD 441
G+K D TF L+ A H+V ++V + ++ +A + + + ++ ++
Sbjct: 175 RGIKPDVVTFNTLMKALCRA---HQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGS 231
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALEQE 486
+ RV RM E C T +++ Y K G + D + ++QE
Sbjct: 232 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQE 277
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 156/340 (45%), Gaps = 2/340 (0%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL L K G+ +A +V +V G+ PT +Y L+ YC+ ++ AF T QMK+
Sbjct: 209 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS-R 267
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+ +PD TY+ LI A R + L +M + V P T N ++ YG+ G ++
Sbjct: 268 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKC 327
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
VLS M E+ KP+V + +I++ F G++ + + + P + +N +I
Sbjct: 328 FIVLSEMQENGL-KPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIID 386
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
AY + D+ ++E M+ + TYN +I+ + E + +
Sbjct: 387 AYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 446
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
D ++ LI+ G K + + K I V Y+ +IS A L EME +Y
Sbjct: 447 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLY 506
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
++M + + P + +IM EAY+K G K L +E LQ
Sbjct: 507 QKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 546
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 141/342 (41%), Gaps = 2/342 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P +Y ++ + ++G+ A +VF+EM E + P Y ++ + + ++ F
Sbjct: 61 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 120
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+QM +P+ TY+ L+ A R L +M + + P+ T +I+ G
Sbjct: 121 RDQM-VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 179
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G M + L++ D +T + +L+ G+V + E + N G+ P
Sbjct: 180 RNGDSKAMLSLFGKYLKNGVTIGD-YTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 238
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+N LI Y + + S M+ TYN +I + + +
Sbjct: 239 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 298
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G+ +TF LI+ Y G K + + + NV Y ++++A K
Sbjct: 299 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 358
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ E + M K P+++ ++ + +AY + G ND+ + L
Sbjct: 359 IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFIL 400
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 156/397 (39%), Gaps = 44/397 (11%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A++VF+ + E+ P TY ++ K G E ++ ++MV G++P Y LL
Sbjct: 82 AVEVFDEMTERAVL-PNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLL 140
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA---------------------- 224
+ CR + E L++M + PD +TYS L
Sbjct: 141 SGLCRAGRMGETSALLDEMAS-QKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGV 199
Query: 225 --------------CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
C D + + E + Q + + P V N ++ GY + G ++E
Sbjct: 200 TIGDYTCSILLNGLCKDG-KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTG---ELE 255
Query: 271 RVLS--GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
S G ++S KPD T N +++ ++ + + ++ G++P TFN LI
Sbjct: 256 GAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLI 315
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
AYG+ +K V+ M++ +Y +++ AF G + M + +
Sbjct: 316 DAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVL 375
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
+ + + +I+ Y G + V I+ ++ YN +I + E E +
Sbjct: 376 PNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEI 435
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
+ PD+ +++ + A G DK L+Q
Sbjct: 436 INSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQ 472
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 130/329 (39%), Gaps = 1/329 (0%)
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
G+ R+ F + G P + + A + EA L +M P+ ++
Sbjct: 6 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 65
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y+ +I A R ++ +M ER+V PN +T N ++ G+ K G + R+ M+
Sbjct: 66 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 125
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
KP+ T N +LS G++ ++ + + P+ T++IL +
Sbjct: 126 -CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 184
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
M S+ K T + ++ G E + + G+ + L
Sbjct: 185 KAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTL 244
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
INGY G S+ I + YNA+I+ KA+ + + + M++
Sbjct: 245 INGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGV 304
Query: 458 RPDSETFSIMTEAYAKEGMNDKVYALEQE 486
P ETF+ + +AY + G +K + + E
Sbjct: 305 NPTVETFNTLIDAYGRTGQLEKCFIVLSE 333
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 156/340 (45%), Gaps = 2/340 (0%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL L K G+ +A +V +V G+ PT +Y L+ YC+ ++ AF T QMK+
Sbjct: 161 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS-R 219
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+ +PD TY+ LI A R + L +M + V P T N ++ YG+ G ++
Sbjct: 220 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKC 279
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
VLS M E+ KP+V + +I++ F G++ + + + P + +N +I
Sbjct: 280 FIVLSEMQENGL-KPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIID 338
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
AY + D+ ++E M+ + TYN +I+ + E + +
Sbjct: 339 AYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 398
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
D ++ LI+ G K + + K I V Y+ +IS A L EME +Y
Sbjct: 399 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLY 458
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
++M + + P + +IM EAY+K G K L +E LQ
Sbjct: 459 QKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 498
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 141/342 (41%), Gaps = 2/342 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P +Y ++ + ++G+ A +VF+EM E + P Y ++ + + ++ F
Sbjct: 13 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+QM +P+ TY+ L+ A R L +M + + P+ T +I+ G
Sbjct: 73 RDQM-VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 131
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G M + L++ D +T + +L+ G+V + E + N G+ P
Sbjct: 132 RNGDSKAMLSLFGKYLKNGVTIGD-YTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 190
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+N LI Y + + S M+ TYN +I + + +
Sbjct: 191 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 250
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G+ +TF LI+ Y G K + + + NV Y ++++A K
Sbjct: 251 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 310
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ E + M K P+++ ++ + +AY + G ND+ + L
Sbjct: 311 IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFIL 352
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 156/397 (39%), Gaps = 44/397 (11%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A++VF+ + E+ P TY ++ K G E ++ ++MV G++P Y LL
Sbjct: 34 AVEVFDEMTERAVL-PNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLL 92
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA---------------------- 224
+ CR + E L++M + PD +TYS L
Sbjct: 93 SGLCRAGRMGETSALLDEMAS-QKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGV 151
Query: 225 --------------CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
C D + + E + Q + + P V N ++ GY + G ++E
Sbjct: 152 TIGDYTCSILLNGLCKDG-KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTG---ELE 207
Query: 271 RVLS--GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
S G ++S KPD T N +++ ++ + + ++ G++P TFN LI
Sbjct: 208 GAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLI 267
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
AYG+ +K V+ M++ +Y +++ AF G + M + +
Sbjct: 268 DAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVL 327
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
+ + + +I+ Y G + V I+ ++ YN +I + E E +
Sbjct: 328 PNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEI 387
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
+ PD+ +++ + A G DK L+Q
Sbjct: 388 INSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQ 424
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 167/376 (44%), Gaps = 5/376 (1%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
+ V + D+ + ++ LQ+ M K+ P Y ++ G+ A +F+
Sbjct: 232 SIVLKALCDNSMSQRALDLLQM--MAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFH 289
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
EM +G++P Y ++ A C+ +D+A + L QM T QPD TYS +I
Sbjct: 290 EMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTT-DGAQPDTVTYSCMIHGYATL 348
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
R + ++++M +R + PN VT N L K G + M KPD+++
Sbjct: 349 GRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGH-KPDIFS 407
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
T+L +A++G M + ++ GI F ILI AY K+ M D + M+
Sbjct: 408 YCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQ 467
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
+ TY+ VI FS MG F QM A G++ +T + +I G+ G
Sbjct: 468 QQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLV 527
Query: 409 KVISSV-RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
K V + +K ++ F+++VI++ K +M+ ++ + RP TF+ +
Sbjct: 528 KAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSL 587
Query: 468 TEAYAKEGMNDKVYAL 483
+ Y G DK + +
Sbjct: 588 IDGYCLVGKMDKAFKI 603
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 150/344 (43%), Gaps = 19/344 (5%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF-V 200
P TY L+ ++ +P+L +F ++ G++ LL C + +EA V
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER--SVTPNTVTQNIVLG 258
L++M L C P+ +YS ++KA D + L Q M ++ + +P+ V + V+
Sbjct: 215 LLHRMSEL-GCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIH 273
Query: 259 GY------GKA-GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
G+ GKA +F +M R KPDV T N I+ +D E +
Sbjct: 274 GFFNEGETGKACSLFHEMTR--------QGVKPDVVTYNLIIDALCKARAMDKAELVLRQ 325
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
G P+T T++ +I Y + + + M+K T N+ + + G
Sbjct: 326 MTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGR 385
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNA 431
+K F+ M A+G K D ++C L++GYA+ G F +I IA N +
Sbjct: 386 SKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTI 445
Query: 432 VISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+I A K + + ++ M+++ PD T+S + +++ G
Sbjct: 446 LIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMG 489
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 132/316 (41%), Gaps = 2/316 (0%)
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM-KTLPNCQPDVYTYS 219
E + + M E G P Y+ +L A C NS+ A L M K C PDV YS
Sbjct: 210 EAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYS 269
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
T+I + +L+ +M + V P+ VT N+++ KA D+ E VL M
Sbjct: 270 TVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTD 329
Query: 280 ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
+PD T + ++ +A G++ + + + + G+ P T N + + K +
Sbjct: 330 GA-QPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKE 388
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+ + M +Y ++ ++ G M F M + G+ A+ F LI+
Sbjct: 389 AAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIH 448
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
YA G+ + + ++ +V Y+ VIS + L + + +M + +P
Sbjct: 449 AYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQP 508
Query: 460 DSETFSIMTEAYAKEG 475
++ +S + + + G
Sbjct: 509 NTAVYSSIIQGFCMHG 524
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 113/255 (44%), Gaps = 8/255 (3%)
Query: 166 VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC 225
+FN M GI ++T L+ AY + ++D+A + +M+ PDV TYST+I
Sbjct: 427 LFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQ-QGVSPDVVTYSTVISTF 485
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
R + M R + PNT + ++ G+ G + + ++S M+ +PD
Sbjct: 486 SRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPD 545
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
+ +++++ G+V ++ + G P TFN LI Y DK +++
Sbjct: 546 IVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILD 605
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
M + TYN +++ + G F +M +G+K +T T+ ++ G AG
Sbjct: 606 AMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAG 665
Query: 406 L-------FHKVISS 413
FH++I S
Sbjct: 666 RTVAARKKFHEMIES 680
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 120/278 (43%), Gaps = 22/278 (7%)
Query: 71 GEYPGVS--ETSIPGYRSKRTPIKNLKKKLERKAK---AKAWVNTVAETFSDHVLKKQWF 125
GE PGV + I GY L K+++ K A V + + + L +F
Sbjct: 576 GERPGVITFNSLIDGY--------CLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYF 627
Query: 126 Q------ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
+ L +F ++ + +P TY +L L ++G+ ARK F+EM+E G T
Sbjct: 628 KNGRINDGLTLFREMQRKGV-KPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTV 686
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+Y +L CRN+ DEA + ++ T+ N + + +T+I A R E + L+
Sbjct: 687 SIYGIILGGLCRNNCADEAIILFQKLGTM-NVKFSITILNTMINAMYKVQRKEEAKELFA 745
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
+ + PN T +++ K G + + S M E + P +N I+ + K
Sbjct: 746 TISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSM-EKSGIVPGSRLLNRIIRMLLEK 804
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
G++ + K I E T ++++ + +K Y
Sbjct: 805 GEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKY 842
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 168/379 (44%), Gaps = 35/379 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
PK T + ++ LG +G+ E A +F E+ E G+ P Y ALL Y + + +A
Sbjct: 289 PKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESI 348
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+++M+ PD +TYS LI A +A R+E + ++M+ V PN+ + +L Y
Sbjct: 349 VSEMER-SGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYR 407
Query: 262 KAGMFDQMERVLSGMLESAT----------------------------------CKPDVW 287
G + + +VL M S +PD
Sbjct: 408 DRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAV 467
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T NT++ G + E +E + G P T T+NI+I ++G++ ++ + +++ M
Sbjct: 468 TWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKM 527
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
+ TY +++ + G K E M + G+K + + LIN YA GL
Sbjct: 528 QSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLS 587
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ I++ R+ + +V N++I+A + E V + MKE +PD T++ +
Sbjct: 588 EQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTL 647
Query: 468 TEAYAKEGMNDKVYALEQE 486
+A + DKV A+ +E
Sbjct: 648 MKALIRVEKFDKVPAVYEE 666
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 147/308 (47%), Gaps = 4/308 (1%)
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE--LIE 235
TP Y AL+ A RN +++A +++M+ D YS +I++ + + +++
Sbjct: 183 TPLTYNALIGACARNDDLEKALNLMSRMRR-DGFPSDFVNYSFIIQSLTRTNKSDSSMLQ 241
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
+Y +++ + + N ++ G+ K+G ++ L+ M++ P T+ +++
Sbjct: 242 KIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLA-MVQGNGLSPKTATLVAVITA 300
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
N G+ + E +E+ + G+ P TR +N L+ Y K S++ M + F
Sbjct: 301 LGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPD 360
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
TY+ +I+A+++ G + ++M A G++ ++ F ++ Y + G + K +R
Sbjct: 361 EHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLR 420
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++ + FYN +I K + L + RM+ + +PD+ T++ + + + K G
Sbjct: 421 EMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSG 480
Query: 476 MNDKVYAL 483
++K L
Sbjct: 481 HHNKAEEL 488
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 113/307 (36%), Gaps = 42/307 (13%)
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
LY+ L+ A R+ + EAF+ L+Q +TL TY+ LI AC E L
Sbjct: 156 LYSILIHALGRSEKLYEAFL-LSQRQTLTPL-----TYNALIGACARNDDLEKALNLMSR 209
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQ-MERVLSGMLESATCKPDVWTMNTILSVFANK 299
M + V + ++ + D M + + +ES + D +N I+ FA
Sbjct: 210 MRRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKS 269
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G V+ + + G+ P+T T +I A G
Sbjct: 270 GDVNRAMSFLAMVQGNGLSPKTATLVAVITALG--------------------------- 302
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+ G + E FE++ G+ T+ + L+ GY G S V +
Sbjct: 303 --------NAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMER 354
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ + Y+ +I A A V K M+ RP+S FS + +Y G K
Sbjct: 355 SGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQK 414
Query: 480 VYALEQE 486
+ + +E
Sbjct: 415 SFQVLRE 421
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 160/350 (45%), Gaps = 3/350 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
AL+V +++ ++ + P TY ++ L K+G+ + A+ + N+MV+ G P + L
Sbjct: 320 HALKVMDLMLQEG-HDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTL 378
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A + ++EA L + T+ PDVYT++ LI A L L+++M
Sbjct: 379 IVALSSQNRLEEAL-DLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSG 437
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
TP+ VT NI++ G +L+ M ES C T NTI+ K +++
Sbjct: 438 CTPDEVTYNILIDHLCSMGKLGNALDLLNEM-ESNGCPRSTVTYNTIIDALCKKMRIEEA 496
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E +++ GI TFN LI K + D + ++E M K + TYN+++
Sbjct: 497 EEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTH 556
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ G+ K E M A G + D T+ LING AG + +R I
Sbjct: 557 YCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPT 616
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
YN VI + + ++L + +++ M E PD+ T+ I+ + + G
Sbjct: 617 PKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGG 666
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 158/379 (41%), Gaps = 44/379 (11%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
+ LL +L + + +L V+NEM GI+P L+ A CR + A + L +M
Sbjct: 164 VFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEM 223
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ PD T++TL++ ++ E + M E +P VT N+++ GY K G
Sbjct: 224 SS-HGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGR 282
Query: 266 F-----------------DQME------------------RVLSGMLESATCKPDVWTMN 290
DQ+ +V+ ML+ PDV+T N
Sbjct: 283 VEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGH-DPDVFTYN 341
Query: 291 TILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
T+++ + G++D + + + G P+T TFN LI A + +++ ++ R+L
Sbjct: 342 TVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQ---NRLEEALDLAREL 398
Query: 351 QFPWTSS---TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
S T+N +I A +GD FE+M + G D T+ LI+ + G
Sbjct: 399 TVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKL 458
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ + + YN +I A K + E E V+ +M + + TF+ +
Sbjct: 459 GNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTL 518
Query: 468 TEAYAK-EGMNDKVYALEQ 485
+ K + ++D +EQ
Sbjct: 519 IDGLCKAKRIDDATELIEQ 537
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 166/424 (39%), Gaps = 43/424 (10%)
Query: 94 LKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQ-----ALQVFEMLKEQPFYQPKEGTYM 148
L+ + R+ A + A + D +L Q AL++ + + P Y
Sbjct: 34 LRPQPRRRGHRPAPLRVYAISDQDRLLAALREQSDPEAALRMLNSALAREDFAPSSAVYE 93
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF-VTLNQMKT 207
+++ LG +G +L + EM EG + + + + +Y R D+A + LNQ+
Sbjct: 94 EIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDN 153
Query: 208 LP-NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
Q D ++ L+ V+ + +L+E++Y +M R + P+ VT N ++ +A
Sbjct: 154 DTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQV 213
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
+L M S PD T T++ F +G ++ R K G P T N+
Sbjct: 214 RTAVLMLEEM-SSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNV 272
Query: 327 LIGAYGK-KRMYDKMS----------------------------------SVMEYMRKLQ 351
LI Y K R+ D + VM+ M +
Sbjct: 273 LINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEG 332
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
TYN VI S G+ + QM G DT TF LI ++ + +
Sbjct: 333 HDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEAL 392
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
R + ++ +V +N +I+A K D R+++ MK C PD T++I+ +
Sbjct: 393 DLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHL 452
Query: 472 AKEG 475
G
Sbjct: 453 CSMG 456
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 146/369 (39%), Gaps = 37/369 (10%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E T+ L+ + G E A +V +M+E G PT L+ YC+ +++A
Sbjct: 230 PDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGY 289
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ Q + +PD TY+T + + M + P+ T N V+
Sbjct: 290 IQQ-EIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLS 348
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G D+ + +++ M++ C PD T NT++ +++ +++ + G+ P+
Sbjct: 349 KNGELDEAKGIVNQMVDRG-CLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDV 407
Query: 322 RTFNILIGAYGKK-------RMYDKMSS----------------------------VMEY 346
TFNILI A K R++++M S ++
Sbjct: 408 YTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNE 467
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M P ++ TYN +I+A + E F+QM A+G+ TF LI+G A
Sbjct: 468 MESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKR 527
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ K + N YN++++ K ++ + + + M D T+
Sbjct: 528 IDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGT 587
Query: 467 MTEAYAKEG 475
+ K G
Sbjct: 588 LINGLCKAG 596
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 90/223 (40%), Gaps = 10/223 (4%)
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
R+L+ L P I+ G D+ME + R G + +
Sbjct: 74 RMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVES 133
Query: 331 YGKKRMYDK-MSSVMEYMRKLQFPWTSST--YNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
Y + R +D + V+ + F + T +N+++ + K +E + +M G+
Sbjct: 134 YARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGI 193
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDLME 444
+ D T LI A H+V ++V + ++ +A + + + ++ I+ +
Sbjct: 194 QPDVVTLNTLIKALCRA---HQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEA 250
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALEQE 486
RV +M E C P T +++ Y K G + D + ++QE
Sbjct: 251 ALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQE 293
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 113/459 (24%), Positives = 194/459 (42%), Gaps = 13/459 (2%)
Query: 32 HRAQVPNFNLIHCSVTSTNKHTSFSSESAVAAKKRLWKEGEYPGVS--ETSIPGYRSKRT 89
+R +P+ +I C+ ++ A + L + G P V I GY K
Sbjct: 85 YRGDIPD--IIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGY-CKSG 141
Query: 90 PIKNLKKKLERKAKAKAWV--NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTY 147
I N + L+R A V NT+ T D + QA++V + ++ Y P TY
Sbjct: 142 EIDNALQVLDRMNVAPDVVTYNTILRTLCD---SGKLKQAMEVLDRQLQKECY-PDVITY 197
Query: 148 MKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKT 207
L+ K A K+ +EM +G +P Y L+ C+ +DEA LN M +
Sbjct: 198 TILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPS 257
Query: 208 LPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFD 267
CQP+V T++ ++++ R+ E L DM + +P+ VT NI++ + G+
Sbjct: 258 Y-GCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 316
Query: 268 QMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
+ +L M C P+ + N +L F + ++D + + + G P+ T+N L
Sbjct: 317 RAIDILEKM-PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTL 375
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
+ A K D ++ + TYN VI+ S +G + ++M +G+
Sbjct: 376 LTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGL 435
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
K D T+ L++G + G + I L I N YN+++ K+
Sbjct: 436 KPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAID 495
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
M K C+P T++I+ E A EG+ + L E
Sbjct: 496 FLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNE 534
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 123/267 (46%), Gaps = 7/267 (2%)
Query: 123 QWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
+W A ++ +ML++ P T+ L+ L + G A + +M G P
Sbjct: 279 RWMDAEKLLSDMLRKG--CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLS 336
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQD 240
Y LL +C+ +D A L+ M + C PD+ TY+TL+ A C D +E L Q
Sbjct: 337 YNPLLHGFCKEKKMDRAIEYLDIMVS-RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ- 394
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
+ + +P +T N V+ G K G ++ ++L M KPD+ T ++++S + +G
Sbjct: 395 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGL-KPDIITYSSLVSGLSREG 453
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+VD +++ GI P T+N ++ K R D+ + YM + T +TY
Sbjct: 454 KVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYT 513
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGM 387
+IE + G AK ++ + G+
Sbjct: 514 ILIEGIAYEGLAKEALDLLNELCSRGL 540
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 120/323 (37%), Gaps = 40/323 (12%)
Query: 191 RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT 250
RN +++ F L M + PD+ ++LI+ + + + + +++ P+
Sbjct: 69 RNGELEDGFKFLESMVYRGDI-PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDV 127
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV----DMME 306
+T N+++ GY K+G D +VL M PDV T NTIL + G++ ++++
Sbjct: 128 ITYNVLISGYCKSGEIDNALQVLDRM----NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183
Query: 307 RWYEK-------------------------------FRNFGIDPETRTFNILIGAYGKKR 335
R +K RN G P+ T+N+LI K+
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
D+ + M T+N ++ + G E M +G TF
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 303
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
LIN GL + I + N YN ++ K + M +
Sbjct: 304 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 363
Query: 456 HCRPDSETFSIMTEAYAKEGMND 478
C PD T++ + A K+G D
Sbjct: 364 GCYPDIVTYNTLLTALCKDGKVD 386
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 168/377 (44%), Gaps = 21/377 (5%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A + F LK Y+P TY LL + GK+G A + EM + Y L
Sbjct: 321 EAKEFFVELKSSG-YEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNEL 379
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+AAY R +E ++ M T P+ TY+T+I A A + L+ M +
Sbjct: 380 VAAYVRAGFYEEGATVIDTM-TRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSG 438
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN T N +L GK ++M ++LS M + C P+ T NT+L++ +KG+ +
Sbjct: 439 CVPNVCTYNSILALLGKKSRSEEMIKILSDMRING-CPPNRITWNTLLAMCGDKGKHKFV 497
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGK-------KRMYDKMSSVMEYMRKLQFPWTSST 358
+ + +N G +P TFN LI AYG+ +MYD+ M K F ++T
Sbjct: 498 NHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDE-------MMKAGFTPCATT 550
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN ++ A + GD K E M +G K + +F +++ YA G + +
Sbjct: 551 YNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIY 610
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
QI + +I A K + MER ++ + + +PD F+ M +AK M
Sbjct: 611 DGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNM-- 668
Query: 479 KVYALEQEKLQMLLEAS 495
Y Q+ L ++ E+
Sbjct: 669 --YERAQKMLDLIRESG 683
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 147/333 (44%), Gaps = 4/333 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR-NSLIDEAFV 200
P T+ LL + G G+ + VF EM G EP + + L++AY R S +D A +
Sbjct: 476 PNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKM 535
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
MK P TY+ L+ A ++ E++ DM + PN + +++L Y
Sbjct: 536 YDEMMKA--GFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCY 593
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G +ER+ + + V IL+ F + V MER +E+ G P+
Sbjct: 594 AKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRA-VRGMERAFEELMKNGYKPD 652
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
FN ++ + K MY++ +++ +R+ TYN+++ ++ G+ E +
Sbjct: 653 MVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILK 712
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+ G D ++ +I G+ GL + I + + I + YN +S
Sbjct: 713 GLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRG 772
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
E++ V M +K+C+P+ T+ I+ + Y K
Sbjct: 773 MFAEVDEVISYMIQKNCKPNELTYKIIVDGYCK 805
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 151/377 (40%), Gaps = 51/377 (13%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY ++ G++G+ A ++FN+M + G P Y ++LA + S +E
Sbjct: 406 PNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKI 465
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L+ M+ + C P+ T++TL+ C D + + + ++++M P T N ++ YG
Sbjct: 466 LSDMR-INGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYG 524
Query: 262 KAG-------MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRN 314
+ G M+D+M + +G AT T N +L+ A +G E RN
Sbjct: 525 RCGSELDAAKMYDEMMK--AGFTPCAT------TYNALLNALARRGDWKAAESVLLDMRN 576
Query: 315 FGIDPETRTFNILIGAYGK-----------KRMYDK------------------------ 339
G P +F++++ Y K K +YD
Sbjct: 577 KGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRG 636
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
M E + K + +N+++ F+ + + + + G++ D T+ L+N
Sbjct: 637 MERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMN 696
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
YA G K ++ K + ++ YN +I + + E RV M + P
Sbjct: 697 MYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICP 756
Query: 460 DSETFSIMTEAYAKEGM 476
T++ YA GM
Sbjct: 757 CIFTYNTFVSGYAGRGM 773
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 127/263 (48%), Gaps = 2/263 (0%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM-FDQMERV 272
DV +T++ A +++ +++ M + ++P+ VT N++L YGK G +D++ +
Sbjct: 231 DVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWDKILDL 290
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
L M + + D +T +T++S +G ++ + ++ + ++ G +P T T+N L+ +G
Sbjct: 291 LDEM-RNEGLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQVFG 349
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K +Y + ++++ M S TYN ++ A+ G + + M +G+ +
Sbjct: 350 KAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAV 409
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
T+ +IN Y AG K + K NV YN++++ K EM ++ M
Sbjct: 410 TYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDM 469
Query: 453 KEKHCRPDSETFSIMTEAYAKEG 475
+ C P+ T++ + +G
Sbjct: 470 RINGCPPNRITWNTLLAMCGDKG 492
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A ++ ++++E QP TY L+ + + G+ A ++ +++ G P Y +
Sbjct: 671 RAQKMLDLIRESGL-QPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTI 729
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +CR L+ EA +++M T C P ++TY+T + F ++ + M +++
Sbjct: 730 IKGFCRQGLMQEAIRVMSEMTTRGIC-PCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKN 788
Query: 246 VTPNTVTQNIVLGGYGKA 263
PN +T I++ GY KA
Sbjct: 789 CKPNELTYKIIVDGYCKA 806
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 171/356 (48%), Gaps = 9/356 (2%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
+MLK + + P T+ L+ L K+ Q E A VF +M + + P YT L+ +
Sbjct: 90 QMLKAK--FVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGT 147
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
ID A + L + T CQP+++TY +++ A A R + ++Q M ++ + P+ V
Sbjct: 148 IGRID-AVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAV 206
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
T NI++ +GK G Q+ER + +S + +V T N++LS KG + + + +
Sbjct: 207 TYNILIDAFGKTG---QLERAFDFVGKSRSFTNEV-TYNSLLSSLGRKGDIQGLMELFGQ 262
Query: 312 FRNFGIDPETRTFNILIGAYG-KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
+ G+ T+ ILI G R+ D +E M + T NNV++ S G
Sbjct: 263 MKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLE-MVDNDIKYDIVTINNVLDCLSKAG 321
Query: 371 DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYN 430
+ F+ M +G+ ADT T+ LING AG + + + A N+ YN
Sbjct: 322 RVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYN 381
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+IS+ K +L R++ MKE+ P+ ++S + E + K G D +L +E
Sbjct: 382 TLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFRE 437
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 154/337 (45%), Gaps = 5/337 (1%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
L+ + G++ E A + +EG PT Y++++ + + + + QM
Sbjct: 36 LIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLK-A 94
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
PD T++ LI + A + E ++ DM + +V+P+ T I++ G G D +
Sbjct: 95 KFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAV 154
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
++ M + C+P+++T ++++ F + G+VD +++ G+ P+ T+NILI
Sbjct: 155 MKLFESM-TAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILID 213
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
A+GK ++ +++ K + TYN+++ + GD + + F QM A+G+ +
Sbjct: 214 AFGKT---GQLERAFDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVS 270
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
+ T+ LI AG V I ++ N V+ KA + ++
Sbjct: 271 NELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELF 330
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ MK K D+ T++I+ + G D AL E
Sbjct: 331 QDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLE 367
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 109/242 (45%), Gaps = 3/242 (1%)
Query: 144 EGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLN 203
E TY LL LG+ G + ++F +M +G+ Y L+ +++ +
Sbjct: 237 EVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYL 296
Query: 204 QMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKA 263
+M + + D+ T + ++ A R E L+QDM + + +TVT NI++ G G+A
Sbjct: 297 EMVD-NDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRA 355
Query: 264 GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
G D +L M E+ C P++ T NT++S + + R + + + G+ P +
Sbjct: 356 GKLDAAGALLLEMEENG-CAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVS 414
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD-AKHMEYTFEQM 382
++ LI +GK D S+ M+ P TYN +I+ G MEY E
Sbjct: 415 YSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMR 474
Query: 383 HA 384
A
Sbjct: 475 DA 476
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 131/319 (41%), Gaps = 33/319 (10%)
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
+++FE + Q QP TY ++ G +G+ + A +F +MV++G++P Y L+
Sbjct: 155 MKLFESMTAQG-CQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILID 213
Query: 188 AYCRNSLIDEAF------------VTLNQMKTLPNCQPDV-------------------Y 216
A+ + ++ AF VT N + + + D+
Sbjct: 214 AFGKTGQLERAFDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNEL 273
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
TY+ LI+ A R E + LY +M + + + VT N VL KAG + + M
Sbjct: 274 TYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDM 333
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
+ D T N +++ G++D + G P T+N LI +YGK
Sbjct: 334 -KFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSN 392
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
+ + M++ +Y+++IE F G F +M AEG + T+
Sbjct: 393 LSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNL 452
Query: 397 LINGYANAGLFHKVISSVR 415
LI+ AG F + +R
Sbjct: 453 LIDCLIRAGRFGAAMEYLR 471
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 114/262 (43%), Gaps = 39/262 (14%)
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
TL+ A A R++ ++ L + M + +T N ++ YG+A M ++ + L+ +
Sbjct: 3 TLLGA---ARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKE 59
Query: 280 ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
+P +T ++++ VF G V Y++ P+ TFNILI + K ++
Sbjct: 60 GG-RPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEE 118
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+V M KL TY +I + +G + FE M A+G + + T+ +++
Sbjct: 119 ACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMH 178
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
+ +AG V AC ++++M +K +P
Sbjct: 179 AFGSAG-------------------------RVDEAC----------DIFQQMVQKGLQP 203
Query: 460 DSETFSIMTEAYAKEGMNDKVY 481
D+ T++I+ +A+ K G ++ +
Sbjct: 204 DAVTYNILIDAFGKTGQLERAF 225
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 91/202 (45%)
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
+L++ + D ++R E + +T+ FN LI YG+ M +K + K
Sbjct: 1 MLTLLGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEG 60
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
T+ TY+++I+ F GD ++ ++QM D TF LI+ A A +
Sbjct: 61 GRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEAC 120
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
+ KL ++ +V Y +I + + + ++++ M + C+P+ T+ + A+
Sbjct: 121 NVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAF 180
Query: 472 AKEGMNDKVYALEQEKLQMLLE 493
G D+ + Q+ +Q L+
Sbjct: 181 GSAGRVDEACDIFQQMVQKGLQ 202
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ GK A ++F EM E G+ P Y++L+ + + D A
Sbjct: 375 PNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISL 434
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVL 257
+MK C P+ TY+ LI + A RF ++M + VT+++++
Sbjct: 435 FREMKA-EGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKVTKSLLV 489
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 113/459 (24%), Positives = 194/459 (42%), Gaps = 13/459 (2%)
Query: 32 HRAQVPNFNLIHCSVTSTNKHTSFSSESAVAAKKRLWKEGEYPGVS--ETSIPGYRSKRT 89
+R +P+ +I C+ ++ A + L + G P V I GY K
Sbjct: 142 YRGDIPD--IIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGY-CKSG 198
Query: 90 PIKNLKKKLERKAKAKAWV--NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTY 147
I N + L+R A V NT+ T D + QA++V + ++ Y P TY
Sbjct: 199 EIDNALQVLDRMNVAPDVVTYNTILRTLCD---SGKLKQAMEVLDRQLQKECY-PDVITY 254
Query: 148 MKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKT 207
L+ K A K+ +EM +G +P Y L+ C+ +DEA LN M +
Sbjct: 255 TILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPS 314
Query: 208 LPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFD 267
CQP+V T++ ++++ R+ E L DM + +P+ VT NI++ + G+
Sbjct: 315 Y-GCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 373
Query: 268 QMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
+ +L M C P+ + N +L F + ++D + + + G P+ T+N L
Sbjct: 374 RAIDILEKMPMHG-CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTL 432
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
+ A K D ++ + TYN VI+ S +G + ++M +G+
Sbjct: 433 LTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGL 492
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
K D T+ L++G + G + I L I N YN+++ K+
Sbjct: 493 KPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAID 552
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
M K C+P T++I+ E A EG+ + L E
Sbjct: 553 FLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNE 591
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 123/267 (46%), Gaps = 7/267 (2%)
Query: 123 QWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
+W A ++ +ML++ P T+ L+ L + G A + +M G P
Sbjct: 336 RWMDAEKLLSDMLRKG--CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLS 393
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQD 240
Y LL +C+ +D A L+ M + C PD+ TY+TL+ A C D +E L Q
Sbjct: 394 YNPLLHGFCKEKKMDRAIEYLDIMVS-RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ- 451
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
+ + +P +T N V+ G K G ++ ++L M KPD+ T ++++S + +G
Sbjct: 452 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGL-KPDIITYSSLVSGLSREG 510
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+VD +++ GI P T+N ++ K R D+ + YM + T +TY
Sbjct: 511 KVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYT 570
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGM 387
+IE + G AK ++ + G+
Sbjct: 571 ILIEGIAYEGLAKEALDLLNELCSRGL 597
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 120/323 (37%), Gaps = 40/323 (12%)
Query: 191 RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT 250
RN +++ F L M + PD+ ++LI+ + + + + +++ P+
Sbjct: 126 RNGELEDGFKFLESMVYRGDI-PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDV 184
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV----DMME 306
+T N+++ GY K+G D +VL M PDV T NTIL + G++ ++++
Sbjct: 185 ITYNVLISGYCKSGEIDNALQVLDRM----NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240
Query: 307 RWYEK-------------------------------FRNFGIDPETRTFNILIGAYGKKR 335
R +K RN G P+ T+N+LI K+
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
D+ + M T+N ++ + G E M +G TF
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 360
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
LIN GL + I + N YN ++ K + M +
Sbjct: 361 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 420
Query: 456 HCRPDSETFSIMTEAYAKEGMND 478
C PD T++ + A K+G D
Sbjct: 421 GCYPDIVTYNTLLTALCKDGKVD 443
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 153/332 (46%), Gaps = 2/332 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E TY LL SG E A VF EM + G P+ +Y A + + +A
Sbjct: 201 PTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEI 260
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+MK CQP TY+ LI A + + ++ +M + PN T ++ +
Sbjct: 261 FERMKR-DRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFA 319
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G+ ++ E + L+ A +PDV+ N ++ ++ G + ++ G +P+
Sbjct: 320 REGLCEKAEEIFE-QLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDR 378
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
++NI++ AYG+ +++ +V E M++L T ++ ++ A+S G E Q
Sbjct: 379 ASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQ 438
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
MH G+K DT ++N Y G F K+ + K ++S YN +I+ +A
Sbjct: 439 MHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGF 498
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
ME +++ + ++ PD T++ AY++
Sbjct: 499 FARMEELFRSLPARNLIPDVVTWTSRIGAYSR 530
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 134/295 (45%), Gaps = 3/295 (1%)
Query: 125 FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+ AL+VF ++ Q +P T+ L+ + G E A ++F ++ E G+EP Y A
Sbjct: 290 YMALKVFHEMRSQKC-KPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNA 348
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ AY R A + M+ + C+PD +Y+ ++ A A E + +++ M
Sbjct: 349 LMEAYSRAGFPYGAAEIFSLMQHM-GCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRL 407
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+TP + ++L Y +AG + E +++ M +S KPD + +N++L+++ GQ +
Sbjct: 408 GITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGI-KPDTFVLNSMLNLYGRLGQFEK 466
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
ME + T+NILI YG+ + +M + + T+ + I
Sbjct: 467 MEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIG 526
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
A+S FE+M G D T L++ +N +V + +R K
Sbjct: 527 AYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACSNGDQIQEVTTVIRTMHK 581
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 106/239 (44%), Gaps = 1/239 (0%)
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
S P+ + N+++ YG+ ++ + E +LE A C P T +L + G ++
Sbjct: 163 SFHPDVICYNLLIDAYGQKSLYKKAESTYLELLE-ARCVPTEDTYALLLKAYCTSGLLEK 221
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
E + + R +G P +N I K K + E M++ + +++TY +I
Sbjct: 222 AEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLIN 281
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
+ + F +M ++ K + TF L+N +A GL K + +
Sbjct: 282 LYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEP 341
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+V YNA++ A +A ++ M+ C PD +++IM +AY + G+++ A+
Sbjct: 342 DVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAV 400
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 103/235 (43%), Gaps = 3/235 (1%)
Query: 245 SVTPNTVTQNIVLGGYGKAGM---FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
S++PN T + ++ + + +D + + +L ++ PDV N ++ + K
Sbjct: 124 SLSPNHTTWDDIINVAVQLRLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSL 183
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
E Y + P T+ +L+ AY + +K +V MRK FP ++ YN
Sbjct: 184 YKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNA 243
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
I+ GD + FE+M + + T T+ LIN Y A + + +
Sbjct: 244 YIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQK 303
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
N+ + A+++A + + E ++++++E PD ++ + EAY++ G
Sbjct: 304 CKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGF 358
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 6/178 (3%)
Query: 319 PETRTFNILIGAYGKKRMYDKM-SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P+ +N+LI AYG+K +Y K S+ +E + P T TY +++A+ G + E
Sbjct: 166 PDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVP-TEDTYALLLKAYCTSGLLEKAEA 224
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
F +M G + I+G G K + + + + + Y +I+
Sbjct: 225 VFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYG 284
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
KA +V+ M+ + C+P+ TF+ + A+A+EG+ +K +E + L EA
Sbjct: 285 KASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKA----EEIFEQLQEAG 338
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 153/351 (43%), Gaps = 8/351 (2%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+ PK Y L+ K G A+ +FNE+ + G+ PT + L+ C++ +DE F
Sbjct: 219 FPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGF 278
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
M+ PDV+TYS LI R ++ E L+ +M +R + PN +T ++ G
Sbjct: 279 RLKKTMEE-NRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDG 337
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
++ D ML KPD+ NT+L+ G V+ + ++ R G+ P
Sbjct: 338 QCRSRRIDSAMNTYHQMLTMGV-KPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKP 396
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ T+ LI Y K+ + + + M + + + +I F G + E T
Sbjct: 397 DKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTL 456
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI---AENVSFYNAVISAC 436
+M GMK D T+ +I+GY G V +L ++QI V YN +++
Sbjct: 457 REMVEAGMKPDDATYTMVIDGYCKKG---NVKMGFKLLKEMQINGHKPGVITYNVLMNGL 513
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEK 487
K + + + M PD T++I+ E + K G + + L EK
Sbjct: 514 CKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEK 564
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 156/372 (41%), Gaps = 45/372 (12%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A+Q F +++ F P G LL + S P ++E++E G P + Y L+
Sbjct: 172 AIQCFRLVRNSNFQIPFHGCGY-LLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILI 230
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+C+ I +A + N+++ +R +
Sbjct: 231 NKFCKEGSIRDAKLIFNEIR------------------------------------KRGL 254
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P TV+ N ++ G K+ D+ R L +E PDV+T + ++ +G++D+ E
Sbjct: 255 RPTTVSFNTLINGLCKSRNLDEGFR-LKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAE 313
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ +++ + G+ P TF LI + R D + M + YN ++
Sbjct: 314 QLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGL 373
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR-LASKLQIAEN 425
+GD ++M GMK D T+ LI+GY G + + + + + +N
Sbjct: 374 CKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDN 433
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
V+F A+IS + + + ER + M E +PD T++++ + Y K+G + L +
Sbjct: 434 VAF-TALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLK 492
Query: 486 EKLQMLLEASGH 497
E ++ +GH
Sbjct: 493 E-----MQINGH 499
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 137/311 (44%), Gaps = 41/311 (13%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+ ++ + ++E Y P TY L+ L K G+ ++A ++F+EM + G+ P +TAL
Sbjct: 276 EGFRLKKTMEENRIY-PDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTAL 334
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI------------KACVDAMRF-- 231
+ CR+ ID A T +QM T+ +PD+ Y+TL+ + VD MR
Sbjct: 335 IDGQCRSRRIDSAMNTYHQMLTM-GVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVG 393
Query: 232 ---------ELIET------------LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
LI+ + + M+E V + V ++ G+ + G E
Sbjct: 394 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAE 453
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
R L M+E A KPD T ++ + KG V M + ++ + G P T+N+L+
Sbjct: 454 RTLREMVE-AGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNG 512
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
K+ + ++E M L TYN ++E G A+ + + + +G+ D
Sbjct: 513 LCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDL---LKLRNEKGLIVD 569
Query: 391 TKTFCCLINGY 401
+ L++ Y
Sbjct: 570 YAYYTSLVSEY 580
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 159/347 (45%), Gaps = 2/347 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E TY LL SG E A VF EM + G P+ +Y A + + +A
Sbjct: 239 PTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEI 298
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+MK CQP TY+ LI A + + ++ +M + PN T ++ +
Sbjct: 299 FERMKR-DRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFA 357
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G+ ++ E + L+ A +PDV+ N ++ ++ G + ++ G +P+
Sbjct: 358 REGLCEKAEEIFE-QLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDR 416
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
++NI++ AYG+ +++ +V E M++L T ++ ++ A+S G E Q
Sbjct: 417 ASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQ 476
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
MH G+K DT ++N Y G F K+ + K ++S YN +I+ +A
Sbjct: 477 MHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGF 536
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
ME +++ + ++ PD T++ AY++ ++ + +E +
Sbjct: 537 FARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMI 583
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 134/295 (45%), Gaps = 3/295 (1%)
Query: 125 FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+ AL+VF ++ Q +P T+ L+ + G E A ++F ++ E G+EP Y A
Sbjct: 328 YMALKVFHEMRSQKC-KPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNA 386
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ AY R A + M+ + C+PD +Y+ ++ A A E + +++ M
Sbjct: 387 LMEAYSRAGFPYGAAEIFSLMQHM-GCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRL 445
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+TP + ++L Y +AG + E +++ M +S KPD + +N++L+++ GQ +
Sbjct: 446 GITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGI-KPDTFVLNSMLNLYGRLGQFEK 504
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
ME + T+NILI YG+ + +M + + T+ + I
Sbjct: 505 MEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIG 564
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
A+S FE+M G D T L++ +N +V + +R K
Sbjct: 565 AYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACSNGDQIQEVTTVIRTMHK 619
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 106/239 (44%), Gaps = 1/239 (0%)
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
S P+ + N+++ YG+ ++ + E +LE A C P T +L + G ++
Sbjct: 201 SFHPDVICYNLLIDAYGQKSLYKKAESTYLELLE-ARCVPTEDTYALLLKAYCTSGLLEK 259
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
E + + R +G P +N I K K + E M++ + +++TY +I
Sbjct: 260 AEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLIN 319
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
+ + F +M ++ K + TF L+N +A GL K + +
Sbjct: 320 LYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEP 379
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+V YNA++ A +A ++ M+ C PD +++IM +AY + G+++ A+
Sbjct: 380 DVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAV 438
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 103/234 (44%), Gaps = 3/234 (1%)
Query: 245 SVTPNTVTQNIVLGGYGKAGM---FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
S++PN T + ++ + + +D + + +L ++ PDV N ++ + K
Sbjct: 162 SLSPNHTTWDDIINVAVQLRLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSL 221
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
E Y + P T+ +L+ AY + +K +V MRK FP ++ YN
Sbjct: 222 YKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNA 281
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
I+ GD + FE+M + + T T+ LIN Y A + + +
Sbjct: 282 YIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQK 341
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
N+ + A+++A + + E ++++++E PD ++ + EAY++ G
Sbjct: 342 CKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAG 395
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 6/178 (3%)
Query: 319 PETRTFNILIGAYGKKRMYDKM-SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P+ +N+LI AYG+K +Y K S+ +E + P T TY +++A+ G + E
Sbjct: 204 PDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVP-TEDTYALLLKAYCTSGLLEKAEA 262
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
F +M G + I+G G K + + + + + Y +I+
Sbjct: 263 VFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYG 322
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
KA +V+ M+ + C+P+ TF+ + A+A+EG+ +K +E + L EA
Sbjct: 323 KASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKA----EEIFEQLQEAG 376
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 160/358 (44%), Gaps = 3/358 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F+ + F QP TY L+ L K G A ++ MV++ P Y +
Sbjct: 238 EALHLFDKTIGEGF-QPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTI 296
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + C++ + EAF ++M T PD++TY++LI A + ++ + TL +M
Sbjct: 297 IDSLCKDRQVTEAFNLFSEMIT-KGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK 355
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ PN V + V+ K GM V+ M++ +PDV T ++ + ++D
Sbjct: 356 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGV-EPDVVTYTALMDGHCLRSEMDEA 414
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ ++ + G P R++NILI Y + + DK ++E M + TYN +I
Sbjct: 415 VKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHG 474
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+G +H F +M A G D T+ L++ + + ++ + +
Sbjct: 475 LCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDAD 534
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ YN I +A +L ++ + K +PD T++IM K G+ D+ L
Sbjct: 535 ILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKL 592
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 131/317 (41%), Gaps = 5/317 (1%)
Query: 92 KNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQAL--QVFEMLKEQPFYQPKEGTYMK 149
K++ L +K N V + L K+ A+ V +M+ ++ +P TY
Sbjct: 342 KHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGV-EPDVVTYTA 400
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
L+ + + A KVF+ MV +G P Y L+ YC+ +D+A L QM +L
Sbjct: 401 LMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQM-SLQ 459
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
D TY+TLI R + L+ +M P+ VT I+L K +
Sbjct: 460 GLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAE- 518
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
VL +E + D+ N + G+++ + + G+ P+ RT+NI+I
Sbjct: 519 AMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIH 578
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
K+ + D+ + + M + YN +I F + ++M AEG A
Sbjct: 579 GLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSA 638
Query: 390 DTKTFCCLINGYANAGL 406
D T ++ ++ GL
Sbjct: 639 DVSTTTLIVEMLSDDGL 655
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 149/370 (40%), Gaps = 43/370 (11%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
AL F ML P P + KLL + K + +M GI P
Sbjct: 133 DALSSFNRMLHMHP--PPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDE 243
L+ ++C + AF L ++ L CQPD T++TLI+ CV+ E + + + E
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKL-GCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGE 249
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
P+ VT ++ G K G R+L M++ C+P+V NTI+ QV
Sbjct: 250 -GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQK-NCRPNVIAYNTIIDSLCKDRQVT 307
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ + GI P+ T+N LI A + +++++ M + ++ V+
Sbjct: 308 EAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 367
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
+A G + M G++ D T+ L++G+
Sbjct: 368 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGH---------------------- 405
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK-EGMNDKVYA 482
C+++ ++ E +V+ M K C P+ +++I+ Y + + M+ +
Sbjct: 406 ------------CLRS-EMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 452
Query: 483 LEQEKLQMLL 492
LEQ LQ L+
Sbjct: 453 LEQMSLQGLI 462
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 176/400 (44%), Gaps = 22/400 (5%)
Query: 107 WVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKV 166
+VN + + +DHV AL+V +++ ++ + P TY ++ L K+GQ E A+ +
Sbjct: 200 FVNGLCQ--NDHV-----GHALKVMDVMVQEG-HDPDVFTYNIVVNCLCKNGQLEEAKGI 251
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
N+MV+ G P + L+AA C + ++EA + L + T+ PDVYT++ LI A
Sbjct: 252 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEA-LDLARQVTVKGVSPDVYTFNILINALC 310
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
L L+++M TP+ VT N ++ G + +L M ES C
Sbjct: 311 KVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM-ESTGCPRST 369
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
T NTI+ K +++ E +++ GI TFN LI K + D ++
Sbjct: 370 ITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQ 429
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M + TYN+++ + GD K E M A G + D T+ LING AG
Sbjct: 430 MISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGR 489
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ +R + YN V+ + + +++ + +++ M E PD+ T+ I
Sbjct: 490 TQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKI 549
Query: 467 MTEAYAKEG------------MNDKVYALEQEKLQMLLEA 494
+ + G M DK + E +ML E
Sbjct: 550 VFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 589
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 165/413 (39%), Gaps = 45/413 (10%)
Query: 111 VAETFSDHVLKKQWFQALQVFEMLKEQPFY--QPKEGTYMKLLVLLGKSGQPELARKVFN 168
V +F D +Q F + + QP + Q Y LL +L + + +L V++
Sbjct: 19 VVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYS 78
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
EM GI+P + L+ A CR + A + L +M + PD T++TL++ V+
Sbjct: 79 EMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSS-RGVAPDETTFTTLMQGFVEE 137
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF-----------------DQME- 270
E + M E + VT N+++ GY K G DQ+
Sbjct: 138 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITY 197
Query: 271 -----------------RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
+V+ M++ PDV+T N +++ GQ++ + +
Sbjct: 198 NTFVNGLCQNDHVGHALKVMDVMVQEGH-DPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 256
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS---TYNNVIEAFSDMG 370
+ G P+ TFN LI A +++ ++ R++ S T+N +I A +G
Sbjct: 257 DRGCLPDITTFNTLIAALCTG---NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 313
Query: 371 DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYN 430
D FE+M G D T+ LI+ + G K + ++ + YN
Sbjct: 314 DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYN 373
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+I K + E E V+ +M + ++ TF+ + + K+ D + L
Sbjct: 374 TIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFEL 426
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 130/312 (41%), Gaps = 10/312 (3%)
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAF-VTLNQMKTLPNCQPDVYTYSTLIKACVD 227
EM EG + + + L +Y L D+A + LNQ++ L Q D Y+ L+ V+
Sbjct: 7 EMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVE 66
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK---P 284
+ +L+E++Y +M R + P+ VT N ++ +A R MLE + + P
Sbjct: 67 GSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRA----HQVRTAVLMLEEMSSRGVAP 122
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK-KRMYDKMSSV 343
D T T++ F +G ++ R + G T N+LI Y K R+ D + +
Sbjct: 123 DETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYI 182
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ + F TYN + H + M EG D T+ ++N
Sbjct: 183 QQEIAD-GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCK 241
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
G + + +++ +N +I+A + L E + +++ K PD T
Sbjct: 242 NGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYT 301
Query: 464 FSIMTEAYAKEG 475
F+I+ A K G
Sbjct: 302 FNILINALCKVG 313
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 75/166 (45%), Gaps = 9/166 (5%)
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST--YNNVIEAFSDMGDAKHMEYTFEQMHA 384
+ +Y ++++D ++ + F + T YN+++ + K +E + +M A
Sbjct: 23 FLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGA 82
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADD 441
G+K D TF L+ A H+V ++V + ++ +A + + + ++ ++
Sbjct: 83 RGIKPDVVTFNTLMKALCRA---HQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGS 139
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALEQE 486
+ RV RM E C T +++ Y K G + D + ++QE
Sbjct: 140 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQE 185
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 175/376 (46%), Gaps = 7/376 (1%)
Query: 113 ETFSDHVLKKQWFQALQV---FEMLKEQPF--YQPKEGTYMKLLVLLGKSGQPELARKVF 167
+ F+ +VL + + ++ Q+ EM +E +P E TY L+ LGK+G+ + AR F
Sbjct: 99 DRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFF 158
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
+ M+E G+ P Y L+ A+ + +D A +MK QP V TY+ L+ A
Sbjct: 159 DAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKR-RGFQPSVVTYNILLDALCS 217
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
A R L+ M +P++ T + ++ G GK+G ++ +V M++ D+
Sbjct: 218 AGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVA-VDLV 276
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
N++L+ A G +D + + ++ G P+ +FN ++ A GK D V M
Sbjct: 277 NYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARM 336
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
+ +YN +I++++ GDA E+M G +TKT+ LI+ A G
Sbjct: 337 VESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQV 396
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ + + +V YN ++ K + R++++MK+K PD+ ++++
Sbjct: 397 DEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVR 456
Query: 468 TEAYAKEGMNDKVYAL 483
+ A + D+ L
Sbjct: 457 IDGLAFDDRLDEALVL 472
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 152/327 (46%), Gaps = 8/327 (2%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
+LV+L G + + EMV EG P L+ AY R + +AF NQ ++
Sbjct: 1 MLVVLASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFA 60
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
C P V+ ++ LI V++ FE E +Y+ + ++ + N+++ +G++G D
Sbjct: 61 -CSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSA 119
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+ M + +PD +T +++ G+V +++ G+ P T+N+L+
Sbjct: 120 MEMFREM-KIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMD 178
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
A+ K D + M++ F + TYN +++A G F +M +G
Sbjct: 179 AFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSP 238
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
D+ T+ L+NG +G + R +A ++ YN++++ KA + M+RV+
Sbjct: 239 DSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGN---MDRVW 295
Query: 450 KRMKE---KHCRPDSETFSIMTEAYAK 473
K MKE K PD+ +F+ + +A K
Sbjct: 296 KLMKEMSRKGFHPDAFSFNTIMDALGK 322
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 142/334 (42%), Gaps = 37/334 (11%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P + KL+ +L SG+ E A V+ ++V++G + Y L+ + R+ +D A
Sbjct: 63 PTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEM 122
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+MK + +PD YTY L+ A A R + + + M ER +TPN T N+++ +
Sbjct: 123 FREMK-IKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFR 181
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G D M L ++ +P V T N +L + G+V + + K G P++
Sbjct: 182 KVGQLD-MALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDS 240
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T++ L+ GK G + F +
Sbjct: 241 YTYSTLVNGLGKS-----------------------------------GRVEEAHKVFRE 265
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G+ D + L+ A AG +V ++ S+ + +N ++ A KA+
Sbjct: 266 MVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANK 325
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
V+ RM E C+PD +++I+ ++YA+ G
Sbjct: 326 PDAAREVFARMVESGCKPDLISYNILIDSYARFG 359
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 116/264 (43%), Gaps = 35/264 (13%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ LGKSG+ E A KVF EMV+ G+ Y +LLA + +D +
Sbjct: 238 PDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKL 297
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ +M + PD ++++T++ A A + + ++ M E P+ ++ NI++ Y
Sbjct: 298 MKEM-SRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYA 356
Query: 262 KAGMFDQMERVLSGM----------------------------------LESATCKPDVW 287
+ G Q ++L M +E+A C+PDV
Sbjct: 357 RFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVV 416
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T N ++ + +G+ R +++ ++ G++P+T ++ + I D+ + + M
Sbjct: 417 TYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDM 476
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGD 371
+ + P + Y +I A GD
Sbjct: 477 KAVGCPVDKAMYRILIRAAHRAGD 500
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 15/260 (5%)
Query: 234 IETLYQDM--DERSVTPNTVTQNIVLGGYG-KAG-MFDQMERVLSGMLESATCKPDVWTM 289
+ETL ++M + R + PNT+ + I G G K+G FD L ES C P V
Sbjct: 14 LETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFD-----LFNQAESFACSPTVHAF 68
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
++ + N G+ + E Y+K G + +N+LI +G+ D S ME R+
Sbjct: 69 TKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLD---SAMEMFRE 125
Query: 350 LQFPWTSS---TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
++ + TY ++ A G + F+ M G+ + T+ L++ + G
Sbjct: 126 MKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQ 185
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ + +V YN ++ A A + +++ +M C PDS T+S
Sbjct: 186 LDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYST 245
Query: 467 MTEAYAKEGMNDKVYALEQE 486
+ K G ++ + + +E
Sbjct: 246 LVNGLGKSGRVEEAHKVFRE 265
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
Q +A V E + E +P TY +L+ +LGK G+ + A ++F +M ++G+EP Y
Sbjct: 395 QVDEAFAVLEEM-ETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSY 453
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
+ + +DEA V MK + C D Y LI+A A EL
Sbjct: 454 AVRIDGLAFDDRLDEALVLFKDMKAV-GCPVDKAMYRILIRAAHRAGDTEL 503
>gi|168039319|ref|XP_001772145.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676476|gb|EDQ62958.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 313
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 134/276 (48%), Gaps = 1/276 (0%)
Query: 129 QVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAA 188
QVF K + ++ Y K++ G+ QP+LA +F+EM + GI+ T Y AL+ +
Sbjct: 1 QVFNWKKSKLRWEVNPKEYAKMISFAGRINQPQLAADLFDEMEKRGIKKTAVSYNALIHS 60
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP 248
Y RN+ +A MK +CQP + TY+TLI E ++ ++ D E P
Sbjct: 61 YGRNNEPQKALQLFEYMKVTVDCQPTLVTYNTLISMYSRMGATEEMKKIFLDCTEAEFVP 120
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW 308
+ T N ++ GY +AG ++ME V L++ DV T N ++ +A VD ME
Sbjct: 121 DRHTYNALIWGYMRAGQLNEME-VTFNELQAKKFNADVITYNALIIGYARANAVDKMEVV 179
Query: 309 YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD 368
+ GI T + LI AY + YD+++ ME ++ + +TYN +I +
Sbjct: 180 LSSMQAVGIPINTMALHALIMAYSRAGTYDRLAKTMEVVKDAGWMLQPATYNILISEYGK 239
Query: 369 MGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
+G ME F +M +K +TF +IN Y A
Sbjct: 240 VGYLDKMEQAFREMMNASVKPSFETFQYMINAYEAA 275
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 111/246 (45%), Gaps = 12/246 (4%)
Query: 232 ELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNT 291
+L L+ +M++R + V+ N ++ YG+ + ++ M + C+P + T NT
Sbjct: 33 QLAADLFDEMEKRGIKKTAVSYNALIHSYGRNNEPQKALQLFEYMKVTVDCQPTLVTYNT 92
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
++S+++ G + M++ + P+ T+N LI Y + ++M ++ +
Sbjct: 93 LISMYSRMGATEEMKKIFLDCTEAEFVPDRHTYNALIWGYMRAGQLNEMEVTFNELQAKK 152
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
F TYN +I ++ ME M A G+ +T LI Y+ AG +
Sbjct: 153 FNADVITYNALIIGYARANAVDKMEVVLSSMQAVGIPINTMALHALIMAYSRAGTYD--- 209
Query: 412 SSVRLASKLQIAENVSF------YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
RLA +++ ++ + YN +IS K L +ME+ ++ M +P ETF
Sbjct: 210 ---RLAKTMEVVKDAGWMLQPATYNILISEYGKVGYLDKMEQAFREMMNASVKPSFETFQ 266
Query: 466 IMTEAY 471
M AY
Sbjct: 267 YMINAY 272
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 2/224 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+ALQ+FE +K QP TY L+ + + G E +K+F + E P Y AL
Sbjct: 69 KALQLFEYMKVTVDCQPTLVTYNTLISMYSRMGATEEMKKIFLDCTEAEFVPDRHTYNAL 128
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ Y R ++E VT N+++ DV TY+ LI A + +E + M
Sbjct: 129 IWGYMRAGQLNEMEVTFNELQA-KKFNADVITYNALIIGYARANAVDKMEVVLSSMQAVG 187
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ NT+ + ++ Y +AG +D++ + + +++ A T N ++S + G +D M
Sbjct: 188 IPINTMALHALIMAYSRAGTYDRLAKTME-VVKDAGWMLQPATYNILISEYGKVGYLDKM 246
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
E+ + + N + P TF +I AY ++ +++ MRK
Sbjct: 247 EQAFREMMNASVKPSFETFQYMINAYEAADNETQVDRILDLMRK 290
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 1/173 (0%)
Query: 309 YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR-KLQFPWTSSTYNNVIEAFS 367
+++ GI ++N LI +YG+ K + EYM+ + T TYN +I +S
Sbjct: 39 FDEMEKRGIKKTAVSYNALIHSYGRNNEPQKALQLFEYMKVTVDCQPTLVTYNTLISMYS 98
Query: 368 DMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVS 427
MG + M+ F D T+ LI GY AG +++ + + +V
Sbjct: 99 RMGATEEMKKIFLDCTEAEFVPDRHTYNALIWGYMRAGQLNEMEVTFNELQAKKFNADVI 158
Query: 428 FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
YNA+I +A+ + +ME V M+ ++ + AY++ G D++
Sbjct: 159 TYNALIIGYARANAVDKMEVVLSSMQAVGIPINTMALHALIMAYSRAGTYDRL 211
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 162/349 (46%), Gaps = 5/349 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY LL + K+ E A V +EM +G P Y ++ CR +D+A
Sbjct: 174 QPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARD 233
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
LN++ + CQPD +Y+TL+K + R++ +E L+ +M E++ PN VT ++++ +
Sbjct: 234 LLNRLFSY-GCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFF 292
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ GM ++ +VL M E C + N +++ +G+VD ++ ++G +P+
Sbjct: 293 CRGGMVERAIQVLQQMTEH-ECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPD 351
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T ++ ++ + ++ +++ M + P T+N I G + E
Sbjct: 352 TISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIE 411
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
QM G T+ L+NG+ G + S++ L + N Y +++ A+
Sbjct: 412 QMQEHGCTVGVVTYNALVNGFCVQG---HIDSALELFRSMPCKPNTITYTTLLTGLCNAE 468
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
L + M + C P+ TF+++ + ++G D+ L ++ ++
Sbjct: 469 RLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMME 517
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/461 (21%), Positives = 180/461 (39%), Gaps = 40/461 (8%)
Query: 51 KHTSFSSESAVAAKKRLWKEGEYPG-VSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVN 109
K++ F E A+A + +G P V+ I + + + + L R +
Sbjct: 189 KNSGF--EQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPD 246
Query: 110 TVAET--FSDHVLKKQWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKV 166
TV+ T K+W ++F EM+++ P E T+ L+ + G E A +V
Sbjct: 247 TVSYTTLLKGLCASKRWDDVEELFAEMMEKN--CMPNEVTFDMLIRFFCRGGMVERAIQV 304
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
+M E L ++ + C+ +D+AF LN M + C PD +Y+T++K
Sbjct: 305 LQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSY-GCNPDTISYTTVLKGLC 363
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE-------- 278
A R+ + L ++M + PN VT N + + G+ +Q ++ M E
Sbjct: 364 RAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVV 423
Query: 279 -----------------------SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
S CKP+ T T+L+ N ++D + +
Sbjct: 424 TYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHR 483
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
P TFN+L+ + +K D+ ++E M + TYN + + + ++
Sbjct: 484 DCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDA 543
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
+ ++G+ D TF +I + + I LA + + YN ++
Sbjct: 544 LELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLG 603
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
K ++ M C P+ T+ I+ E A+EG+
Sbjct: 604 LCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGL 644
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 143/369 (38%), Gaps = 7/369 (1%)
Query: 119 VLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPT 178
+ ++ A ++ E+ + P KL+ L + G+ A +V G
Sbjct: 50 IAREDLAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVD 109
Query: 179 PELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
Y L+A YCR +D A + M PD YTY+ LI+ D R +L
Sbjct: 110 VFAYNTLVAGYCRYGHLDAARRLIGSMPV----APDAYTYTPLIRVLCDRGRVADALSLL 165
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
DM R PN VT ++L K F+Q VL M + C P++ T N I++
Sbjct: 166 DDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEM-RAKGCTPNIVTYNVIINGMCR 224
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+G+VD + ++G P+T ++ L+ G KR D E M K P
Sbjct: 225 EGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMP-NEV 283
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
T++ +I F G + +QM +T +IN G +
Sbjct: 284 TFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNM 343
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
+ Y V+ +A+ + + + K M +C P+ TF+ ++G+
Sbjct: 344 GSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLI 403
Query: 478 DKVYALEQE 486
++ L ++
Sbjct: 404 EQAIMLIEQ 412
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/477 (19%), Positives = 175/477 (36%), Gaps = 40/477 (8%)
Query: 8 ASLSFSSSLLPSPLPHPHDTKTNKHRAQVPNFNLIHCSVTSTNKHTSFSSESAVAAKKRL 67
+S F + P+P PH H R + PN + A A +RL
Sbjct: 7 SSFLFPHATFPNPKPH-HLAAAAATRPESPNV----------------APNPASARLRRL 49
Query: 68 WKEGEYPGVSE-TSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQ 126
+ G + + R P L KL R + + A +
Sbjct: 50 IAREDLAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLR---AAEGSGS 106
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+ VF Y L+ + G + AR++ M + P YT L+
Sbjct: 107 PVDVF--------------AYNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLI 149
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
C + +A L+ M CQP+V TY+ L++A FE + +M +
Sbjct: 150 RVLCDRGRVADALSLLDDMLR-RGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGC 208
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
TPN VT N+++ G + G D +L+ + S C+PD + T+L + D +E
Sbjct: 209 TPNIVTYNVIINGMCREGRVDDARDLLNRLF-SYGCQPDTVSYTTLLKGLCASKRWDDVE 267
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ + P TF++LI + + M ++ V++ M + + ++ N VI +
Sbjct: 268 ELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSI 327
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G M + G DT ++ ++ G A ++ ++ + N
Sbjct: 328 CKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNE 387
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+N I + + + + ++M+E C T++ + + +G D L
Sbjct: 388 VTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALEL 444
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/206 (15%), Positives = 73/206 (35%), Gaps = 3/206 (1%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
PDV+ ++ +G+ R G + +N L+ Y + Y + +
Sbjct: 73 PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCR---YGHLDAA 129
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ + + TY +I D G + M G + + T+ L+
Sbjct: 130 RRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCK 189
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
F + ++ + N+ YN +I+ + + + + R+ C+PD+ +
Sbjct: 190 NSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVS 249
Query: 464 FSIMTEAYAKEGMNDKVYALEQEKLQ 489
++ + + D V L E ++
Sbjct: 250 YTTLLKGLCASKRWDDVEELFAEMME 275
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 171/369 (46%), Gaps = 17/369 (4%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY +L ++ KSGQ LA ++ +M E I+ Y+ ++ C++ +D AF
Sbjct: 225 QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN 284
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
N+M+ + ++ TY+ LI +A R++ L +DM +R + PN VT ++++ +
Sbjct: 285 LFNEME-MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 343
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + E + M+ PD T +++ F + +D + + + G DP
Sbjct: 344 VKEGKLREAEELHKEMIHRGI-APDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 402
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT---SSTYNNVIEAFSDMGDAKHMEY 377
RTFNILI Y K +++ +E RK+ + TYN +I+ F ++G +
Sbjct: 403 IRTFNILINGYCKA---NRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
F++M + + + T+ L++G + G K + K ++ ++ YN +I
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 519
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
A + + ++ + K +P +T++IM K+G E E L +E GH
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG-----PLSEAELLFRKMEEDGH 574
Query: 498 ----WQQNI 502
W NI
Sbjct: 575 APDGWTYNI 583
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 140/326 (42%), Gaps = 4/326 (1%)
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
LA ++++ G EP ++ L+ C + EA +++M + + +PD+ T +TL
Sbjct: 141 LAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH-KPDLITINTL 199
Query: 222 IKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
+ C+ E + L M E PN VT VL K+G +L M E
Sbjct: 200 VNGLCLSGKEAEAM-LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM-EER 257
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
K D + I+ G +D + + GI T+NILIG + +D
Sbjct: 258 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDG 317
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+ ++ M K + T++ +I++F G + E ++M G+ DT T+ LI+G
Sbjct: 318 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 377
Query: 401 YANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
+ K V L N+ +N +I+ KA+ + + ++++M + D
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVAD 437
Query: 461 SETFSIMTEAYAKEGMNDKVYALEQE 486
+ T++ + + + + G + L QE
Sbjct: 438 TVTYNTLIQGFCELGKLNVAKELFQE 463
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 114/265 (43%), Gaps = 2/265 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ K + A ++ + MV +G +P + L+ YC+ + ID+
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+M +L D TY+TLI+ + + + + L+Q+M R V PN VT I+L G
Sbjct: 426 FRKM-SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC 484
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
G ++ + +E + + D+ N I+ N +VD + G+ P
Sbjct: 485 DNGESEKALEIFEK-IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGV 543
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+T+NI+IG KK + + M + TYN +I A GDA E+
Sbjct: 544 KTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEE 603
Query: 382 MHAEGMKADTKTFCCLINGYANAGL 406
+ G D T +I+ ++ L
Sbjct: 604 LKRCGFSVDASTIKMVIDMLSDGRL 628
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 139/320 (43%), Gaps = 8/320 (2%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A +F +M+ PT ++ L +A + D QM+ L ++YT S +I
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQME-LKGIAHNLYTLSIMI 130
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
+ L + + + PNT+T + ++ G G + ++ M+E
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH- 189
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
KPD+ T+NT+++ G+ +K +G P T+ ++ K + +
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS---GQTAL 246
Query: 343 VMEYMRKLQ---FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
ME +RK++ + Y+ +I+ G + F +M +G+ + T+ LI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
G+ NAG + +R K +I NV ++ +I + +K L E E ++K M + P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 460 DSETFSIMTEAYAKEGMNDK 479
D+ T++ + + + KE DK
Sbjct: 367 DTITYTSLIDGFCKENHLDK 386
>gi|357123295|ref|XP_003563347.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Brachypodium distachyon]
Length = 800
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 174/363 (47%), Gaps = 6/363 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQ--PELARKVFNEMVEEGIEPTPELYT 183
+AL++F LK + P Y +L + G+ G+ P++ + EM G+EP +
Sbjct: 205 RALELFAELKREGV-APTHVMYNVMLDVYGRMGRSWPQIV-AMLEEMRAAGVEPDGFTAS 262
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
++AA R+ L+DEA +K+ + P V TY+ L++ A + + ++M+E
Sbjct: 263 TVIAACGRDGLVDEAVAFFEDLKSRGHV-PCVVTYNALLQVFGKAGNYMEALRVLKEMEE 321
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
P+ VT N + G Y +AG +++ + L M+ S P+ +T NTI++ + N G+VD
Sbjct: 322 SGCKPDAVTYNELAGSYARAGFYEEAAKCLDTMV-SKGILPNAFTYNTIMTAYGNAGKVD 380
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
++ + G P T+N+++G GKK ++ M ++ M + T+N ++
Sbjct: 381 EALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSRSGCTPNRVTWNTML 440
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
G ++ E+M + G++ TF LI+ Y G +
Sbjct: 441 AVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTAAGFT 500
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
++ YNA++S + D + + +MK + +P+ ++S++ + +AK G + A+
Sbjct: 501 PCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQCHAKGGNAAGIEAI 560
Query: 484 EQE 486
E+E
Sbjct: 561 EKE 563
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 166/361 (45%), Gaps = 17/361 (4%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ FE LK + + P TY LL + GK+G A +V EM E G +P Y L
Sbjct: 276 EAVAFFEDLKSRG-HVPCVVTYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNEL 334
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+Y R +EA L+ M + P+ +TY+T++ A +A + + L+ M +
Sbjct: 335 AGSYARAGFYEEAAKCLDTMVS-KGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNG 393
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P T N++LG GK F+ M +L M S C P+ T NT+L+V +G +
Sbjct: 394 FIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSRSG-CTPNRVTWNTMLAVCGKRGMEGYV 452
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKK-------RMYDKMSSVMEYMRKLQFPWTSST 358
R E+ ++ G++ TFN LI AYG+ +MYD+M++ F +T
Sbjct: 453 TRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTAA-------GFTPCLTT 505
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN ++ S GD + +M EG K + ++ L+ +A G + + +
Sbjct: 506 YNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVY 565
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ + + ++ + K L +ER ++ + + +PD F+ M YAK GM
Sbjct: 566 EGTVFPSWVILRTLVISNFKCRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYR 625
Query: 479 K 479
K
Sbjct: 626 K 626
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 126/282 (44%), Gaps = 4/282 (1%)
Query: 202 LNQMKTLPNCQP--DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L++M LP P DV Y+T++ A R+E L+ ++ V P V N++L
Sbjct: 172 LDEMLPLPPGSPGLDVRAYTTVLHALSHEGRYERALELFAELKREGVAPTHVMYNVMLDV 231
Query: 260 YGKAGM-FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
YG+ G + Q+ +L M +A +PD +T +T+++ G VD ++E ++ G
Sbjct: 232 YGRMGRSWPQIVAMLEEM-RAAGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLKSRGHV 290
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P T+N L+ +GK Y + V++ M + + TYN + +++ G +
Sbjct: 291 PCVVTYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKC 350
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
+ M ++G+ + T+ ++ Y NAG + ++ K V+ YN ++ K
Sbjct: 351 LDTMVSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGK 410
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
M + M C P+ T++ M K GM V
Sbjct: 411 KSRFNVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYV 452
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 134/313 (42%), Gaps = 22/313 (7%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
T+ L+ G+ G A K+++EM G P Y ALL+ R A +N+M
Sbjct: 470 TFNTLISAYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKM 529
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
K +P+ +YS L++ IE + +++ E +V P+ V ++ K
Sbjct: 530 KN-EGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYEGTVFPSWVILRTLVISNFKCRR 588
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+ +ER ++ KPD+ N++LS++A G ++ + G+ P+ T+N
Sbjct: 589 LEGIERAFQEVMARGH-KPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYN 647
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
++ Y K + +++ ++ Q +YN V+ F G K + +M A+
Sbjct: 648 SMMDMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMIAD 707
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G++ T+ L+ GYA+ +F S R I N+S M
Sbjct: 708 GVRPCVVTYHTLVGGYASREMF----SEAREVVSYMIQRNLS----------------PM 747
Query: 446 ERVYKRMKEKHCR 458
E Y+R+ + +C+
Sbjct: 748 ELTYRRVVDSYCK 760
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 161/426 (37%), Gaps = 77/426 (18%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+ +AL+V + ++E +P TY +L ++G E A K + MV +GI P Y
Sbjct: 308 NYMEALRVLKEMEESGC-KPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTY 366
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
++ AY +DEA + MK P V TY+ ++ RF ++ + +M
Sbjct: 367 NTIMTAYGNAGKVDEALALFDWMKK-NGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMS 425
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT--CKPDVWTMNTILSVFANKG 300
TPN VT N +L GK GM + RVL M C+ T NT++S + G
Sbjct: 426 RSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRD---TFNTLISAYGRCG 482
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+ Y++ G P T+N L+ ++ + S++ M+ F +Y+
Sbjct: 483 SRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYS 542
Query: 361 NVIEAFSDMGDA-----------------------------------KHMEYTFEQMHAE 385
+++ + G+A + +E F+++ A
Sbjct: 543 LLLQCHAKGGNAAGIEAIEKEVYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQEVMAR 602
Query: 386 GMKADTKTFCCLINGYANAGLFHKV------ISSVRLASKL------------------- 420
G K D F +++ YA G++ K I L+ L
Sbjct: 603 GHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEA 662
Query: 421 ----------QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
Q+ +V YN V++ K + E +R+ M RP T+ +
Sbjct: 663 EKILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMIADGVRPCVVTYHTLVGG 722
Query: 471 YAKEGM 476
YA M
Sbjct: 723 YASREM 728
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 168/344 (48%), Gaps = 6/344 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY +L L GQ A ++F +M ++G +P Y ++ + C++ L+++A
Sbjct: 336 PDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEF 395
Query: 202 LNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L++M + +P P+ TYST++ + + + L+++M R+V PNT+T +I++ G
Sbjct: 396 LSEMVDRGIP---PNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDG 452
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ GM + V M E +P+++T N +++ + + +++ + +E G P
Sbjct: 453 LCQEGMVSEARWVFETMTEKGV-EPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAP 511
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ ++NILI Y R DK +++ M + + TYN +++ +G + F
Sbjct: 512 DLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELF 571
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
++M + GM T+ L+NG G + + + + ++ ++ Y +I
Sbjct: 572 KKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIG 631
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
L + ++ ++ +P T+++M + KEG++D+ Y L
Sbjct: 632 GKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYEL 675
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 161/347 (46%), Gaps = 8/347 (2%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
++P +Y L+ L SG +A VF +M + G +P Y ++ + C++ L+++A
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253
Query: 200 VTLNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVL 257
L++M + +P PD TY++++ + L++ M++ P+ VT NI++
Sbjct: 254 DFLSEMVGRGIP---PDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIII 310
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
K + + LS M++ PDV T TIL GQ++ R ++K G
Sbjct: 311 DSLYKDRLVNDAADFLSEMVDQGI-PPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGC 369
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P+ +N +I + K R+ + + M P + TY+ ++ F ++G
Sbjct: 370 KPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQ 429
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA-C 436
F++M + +T TF L++G G+ + ++ + N+ YNA+++ C
Sbjct: 430 LFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYC 489
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
++ + E +V++ M K C PD +++I+ Y DK AL
Sbjct: 490 LRC-KMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKAL 535
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 152/344 (44%), Gaps = 6/344 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY ++ L GQ A ++F M + G +P Y ++ + ++ L+++A
Sbjct: 266 PDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADF 325
Query: 202 LNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L++M + +P PDV TY+T++ + L++ M+++ P+ V N ++
Sbjct: 326 LSEMVDQGIP---PDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDS 382
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K + + LS M++ P+ T +TIL F N GQ+D + +++ + P
Sbjct: 383 LCKDRLVNDAMEFLSEMVDRGI-PPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMP 441
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
T TF+IL+ ++ M + V E M + TYN ++ + F
Sbjct: 442 NTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVF 501
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
E M +G D ++ LINGY N+ K + + S ++ N YN ++
Sbjct: 502 EIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYV 561
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
L++ + ++K+M P T+SI+ K G D+ L
Sbjct: 562 GRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKL 605
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 148/381 (38%), Gaps = 39/381 (10%)
Query: 131 FEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYC 190
+ M + P +P + K L + K Q + N+M G+ T L+ C
Sbjct: 82 YRMARMNP--RPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLC 139
Query: 191 RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT 250
R + +D A +M L QPDV T++TLI + + ++ LY +M P+
Sbjct: 140 RLNHVDFAVSVWGKMFKL-GIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDV 198
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK----------- 299
++ N ++ G +G + V M E CKP+V T NTI+
Sbjct: 199 ISYNTLINGLCNSGNTNMAVHVFKKM-EQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLS 257
Query: 300 ------------------------GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
GQ++ R +++ G P+ T+NI+I + K R
Sbjct: 258 EMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDR 317
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
+ + + + M P TY ++ +G F++M +G K D +
Sbjct: 318 LVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYN 377
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
+I+ L + + + I N Y+ ++ L E +++K M +
Sbjct: 378 TIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGR 437
Query: 456 HCRPDSETFSIMTEAYAKEGM 476
+ P++ TFSI+ + +EGM
Sbjct: 438 NVMPNTLTFSILVDGLCQEGM 458
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 151/330 (45%), Gaps = 2/330 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ +S + E A K+F+EM+++GIEP +YT+++ C+ + AFV ++M
Sbjct: 264 TYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEM 323
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
T P+ YTY LI A + E + DM + V N V N ++ GY K GM
Sbjct: 324 -TERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGM 382
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D+ R L +++ + D +T N I S F + + +R G+ P +F+
Sbjct: 383 IDEALR-LQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFS 441
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
ILI Y K++ + + + + M K + TYN IE + G + +M
Sbjct: 442 ILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQER 501
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G+ DT T+ LI+G +G + + +L + NV Y +IS K E
Sbjct: 502 GLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEA 561
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++Y M ++ PD +S + + K G
Sbjct: 562 FKLYDEMNKEGIVPDDGIYSSLIASLHKVG 591
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/422 (20%), Positives = 172/422 (40%), Gaps = 41/422 (9%)
Query: 110 TVAETFSDHVLK-----KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELAR 164
++ E F D + + + + +L+VF+ +++ F + E + + L+ L +SG EL
Sbjct: 119 SIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGF-EIDERSCFEFLLALKRSGNMELCV 177
Query: 165 KVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
+ +MV+ GIE +TA++ C+ + A ++++ +P V TY+TL+
Sbjct: 178 EFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDEL-VCKGFKPSVITYNTLLNG 236
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA---- 280
++ + + M++ V N T +++ Y ++ ++ E++ ML+
Sbjct: 237 YIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPD 296
Query: 281 ----------TCK--------------------PDVWTMNTILSVFANKGQVDMMERWYE 310
CK P+ +T +++ G++ E
Sbjct: 297 VYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVN 356
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
++ G+D FN L+ Y KK M D+ + M++ F + T N + F
Sbjct: 357 DMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSN 416
Query: 371 DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYN 430
+ + M G+ + +F LI+ Y F + ++ K A +V YN
Sbjct: 417 RREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYN 476
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
A I K + E ++ M+E+ PD+ T++ + + G D+ L E Q+
Sbjct: 477 AFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQL 536
Query: 491 LL 492
L
Sbjct: 537 GL 538
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 169/365 (46%), Gaps = 5/365 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL++++ ++ + +P ++ L+ L + G+ + A EM G+ P +YT +
Sbjct: 218 EALKIYKEMRHRGI-KPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 276
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +CR L+ +A ++M C PDV TY+TL+ R E L +M ER
Sbjct: 277 IGGFCRAGLMSDALRVRDEMVGC-GCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERG 335
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
V P+ T ++ GY G D+ ++ ML +PD+ T NT++ +G +D
Sbjct: 336 VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL-RPDIVTYNTLIDGMCRQGDLDKA 394
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
++ + I P T++ILI ++ +K ++ D + E + K P TYN++I+
Sbjct: 395 NDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILP-NIMTYNSIIK 453
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
+ G+ + ++M + D T+ LI+GY H + + K ++
Sbjct: 454 GYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQP 513
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
+V YN +I+ ++ E ++++M K PD T+ M + G + + + L
Sbjct: 514 DVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLH 573
Query: 485 QEKLQ 489
E LQ
Sbjct: 574 DEMLQ 578
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 159/353 (45%), Gaps = 6/353 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY +L L +SG + A +VF EM + G+ P +T L+ +CR I+EA
Sbjct: 162 KPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALK 221
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M+ +PD+ ++S LI + + ++M + P+ V +V+GG+
Sbjct: 222 IYKEMRH-RGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGF 280
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+AG+ RV M+ C PDV T NT+L+ + ++ E + R G+ P+
Sbjct: 281 CRAGLMSDALRVRDEMV-GCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPD 339
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
TF LI Y + DK + + M + TYN +I+ GD ++
Sbjct: 340 LCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWD 399
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
MH+ + + T+ LI+ + G + I N+ YN++I ++
Sbjct: 400 DMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSG 459
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYAL---EQEKLQ 489
++ + ++ ++M PD T++ + Y KE M+D L E+EK+Q
Sbjct: 460 NVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQ 512
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 124/274 (45%), Gaps = 1/274 (0%)
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
N + + YT + ++ A+ F+ ++ + +M++R V P+ VT N+++ +AG +
Sbjct: 90 NSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAA 149
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
++ M+ S KP + T N++L G D +++ +FG+ P+ R+F ILIG
Sbjct: 150 MALVDSMV-SKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIG 208
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+ + ++ + + MR +++ +I F+ G H +M G+
Sbjct: 209 GFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVP 268
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
D + +I G+ AGL + +V YN +++ K L++ E +
Sbjct: 269 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 328
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
M+E+ PD TF+ + Y EG DK L
Sbjct: 329 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQL 362
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 82/167 (49%), Gaps = 2/167 (1%)
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYM-RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
T T NI++ Y K +DK+ +V+ M ++ FP T+N +++A GDA+
Sbjct: 95 TYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFP-DVVTHNVMVDARFRAGDAEAAMALV 153
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
+ M ++G+K T+ ++ G +G++ K + +A +V + +I +
Sbjct: 154 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 213
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
++ E ++YK M+ + +PD +FS + +A+ G D A +E
Sbjct: 214 GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLRE 260
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 151/330 (45%), Gaps = 2/330 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ +S + E A K+F+EM+++GIEP +YT+++ C+ + AFV ++M
Sbjct: 260 TYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEM 319
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
T P+ YTY LI A + E + DM + V N V N ++ GY K GM
Sbjct: 320 -TERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGM 378
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D+ R L +++ + D +T N I S F + + +R G+ P +F+
Sbjct: 379 IDEALR-LQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFS 437
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
ILI Y K++ + + + + M K + TYN IE + G + +M
Sbjct: 438 ILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQER 497
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G+ DT T+ LI+G +G + + +L + NV Y +IS K E
Sbjct: 498 GLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEA 557
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++Y M ++ PD +S + + K G
Sbjct: 558 FKLYDEMNKEGIVPDDGIYSSLIASLHKVG 587
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/422 (20%), Positives = 172/422 (40%), Gaps = 41/422 (9%)
Query: 110 TVAETFSDHVLK-----KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELAR 164
++ E F D + + + + +L+VF+ +++ F + E + + L+ L +SG EL
Sbjct: 115 SIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGF-EIDERSCFEFLLALKRSGNMELCV 173
Query: 165 KVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
+ +MV+ GIE +TA++ C+ + A ++++ +P V TY+TL+
Sbjct: 174 EFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDEL-VCKGFKPSVITYNTLLNG 232
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA---- 280
++ + + M++ V N T +++ Y ++ ++ E++ ML+
Sbjct: 233 YIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPD 292
Query: 281 ----------TCK--------------------PDVWTMNTILSVFANKGQVDMMERWYE 310
CK P+ +T +++ G++ E
Sbjct: 293 VYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVN 352
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
++ G+D FN L+ Y KK M D+ + M++ F + T N + F
Sbjct: 353 DMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSN 412
Query: 371 DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYN 430
+ + M G+ + +F LI+ Y F + ++ K A +V YN
Sbjct: 413 RREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYN 472
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
A I K + E ++ M+E+ PD+ T++ + + G D+ L E Q+
Sbjct: 473 AFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQL 532
Query: 491 LL 492
L
Sbjct: 533 GL 534
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 164/373 (43%), Gaps = 15/373 (4%)
Query: 108 VNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEG--TYMKLLVLLGKSGQPELARK 165
VN + + D K+ +A+ V +L++ P + G +Y LL L + E AR+
Sbjct: 122 VNQLLKGLCD---TKRVGEAMHV--LLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARE 176
Query: 166 VFNEMVE---EGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
+ + MV+ P Y ++ + +D+A+ +M PDV TY+T+I
Sbjct: 177 LLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEMGV----SPDVVTYNTII 232
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
A + E ++Q M E+ V PN VT N ++ G KA D E V M++
Sbjct: 233 DGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGV- 291
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
KP T NTI+ VD E +++ + G+ P+ T+N +I K + DK
Sbjct: 292 KPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEG 351
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
V + M + TY +I+ E F+QM +G+K + T+ CLI+GY
Sbjct: 352 VFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYL 411
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
+ G + +V+ ++ S + +V Y ++ K E ++ M K +P
Sbjct: 412 STGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVT 471
Query: 463 TFSIMTEAYAKEG 475
+ IM Y K+G
Sbjct: 472 IYGIMLHGYGKKG 484
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 153/345 (44%), Gaps = 3/345 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY ++ L K+ + + A VF +MVE+G++P Y ++ C+ +D A
Sbjct: 223 PDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGV 282
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+M +P TY+T+I A + E ++Q M +R V P+ VT N ++ G
Sbjct: 283 FQKMVD-KGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLC 341
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
KA D+ E V M++ KPD T I+ VD E +++ + G+ P
Sbjct: 342 KAQAIDKAEGVFQQMIDKGV-KPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNN 400
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+N LI Y ++++ ++ M TY +++ G F+
Sbjct: 401 GTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDS 460
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M +G+K + +++GY G ++ + L I+ N +N VI A K
Sbjct: 461 MIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAM 520
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALEQ 485
+ E+ ++ +MK++ P+ T+ + +A K G ++D V Q
Sbjct: 521 IDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQ 565
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 159/367 (43%), Gaps = 30/367 (8%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF-V 200
P TY ++ + G+ EL F +++ G + LL C + EA V
Sbjct: 82 PDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHV 141
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ---DMDERSVTPNTVTQNIVL 257
L QM + C+ V +Y+TL+K D R E L D + S +P+ V+ NIV+
Sbjct: 142 LLRQMPEV-GCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVI 200
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
G+ G Q+++ S LE PDV T NTI+ +VD E +++ G+
Sbjct: 201 NGFFNEG---QVDKAYSLFLEMGV-SPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGV 256
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P T+N +I K + D V + M ++ TYN +I+ E
Sbjct: 257 KPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEG 316
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANA-------GLFHKVISSVRLASKLQIAENVSFYN 430
F+QM G+K D T+ +I+G A G+F ++I K +N++ Y
Sbjct: 317 VFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMI------DKGVKPDNLT-YT 369
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
+I KA + E V+++M +K +P++ T++ + Y G +E +Q
Sbjct: 370 IIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQ-------WEEVVQR 422
Query: 491 LLEASGH 497
+ E S H
Sbjct: 423 IKEMSAH 429
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 142/323 (43%), Gaps = 5/323 (1%)
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
GQ + A +F EM G+ P Y ++ C+ +D A QM +P+ T
Sbjct: 207 GQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVE-KGVKPNNVT 262
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y+T+I A ++ E ++Q M ++ V P+ VT N ++ G KA D+ E V M+
Sbjct: 263 YNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMI 322
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
+ KPD T NTI+ +D E +++ + G+ P+ T+ I+I K +
Sbjct: 323 DRGV-KPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSV 381
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
D+ V + M + TYN +I + G + + ++M A ++ D T+ L
Sbjct: 382 DRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLL 441
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
++ G ++ S + I +V+ Y ++ K L EM + M
Sbjct: 442 LDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGI 501
Query: 458 RPDSETFSIMTEAYAKEGMNDKV 480
P+ F+ + AYAK M D+V
Sbjct: 502 SPNHRIFNTVICAYAKRAMIDEV 524
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 170/451 (37%), Gaps = 72/451 (15%)
Query: 109 NTVAETFSDHVLKKQWFQ-ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
N T D + K Q A VF+ + ++ +P TY ++ L K+ + A VF
Sbjct: 260 NVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGV-KPSNVTYNTIIDGLCKAQAVDRAEGVF 318
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
+M++ G++P Y ++ C+ ID+A QM +PD TY+ +I
Sbjct: 319 QQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMID-KGVKPDNLTYTIIIDGLCK 377
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS------------- 274
A + E ++Q M ++ V PN T N ++ GY G ++++ + +
Sbjct: 378 AQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFT 437
Query: 275 -GMLESATCK--------------------PDVWTMNTILSVFANKGQVDMMERWYEKFR 313
G+L CK P V +L + KG + M
Sbjct: 438 YGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMV 497
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
GI P R FN +I AY K+ M D++ + M++ TY +I+A +G
Sbjct: 498 ANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVD 557
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
F QM EG+ + F L+ G + KV I ++ F+N V+
Sbjct: 558 DAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVL 617
Query: 434 SACIKADDLMEMERV---------------YKRMKEKHC--------------------R 458
K +ME R+ Y + + HC +
Sbjct: 618 CNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLK 677
Query: 459 PDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
P+ +++ + Y K G D Y L +E L+
Sbjct: 678 PNIVSYNTLLHGYCKAGRIDNAYCLFREMLR 708
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 171/379 (45%), Gaps = 7/379 (1%)
Query: 114 TFSDHVLKKQWF-QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE 172
T D + K Q +A VF+ + E+ +P TY ++ L K+ + ++A VF +MV+
Sbjct: 230 TIIDGLCKAQEVDRAEDVFQQMVEKGV-KPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVD 288
Query: 173 EGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE 232
+G++P+ Y ++ C+ +D A QM +PD TY+T+I A +
Sbjct: 289 KGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMID-RGVKPDHVTYNTIIDGLCKAQAID 347
Query: 233 LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTI 292
E ++Q M ++ V P+ +T I++ G KA D+ E V M++ KP+ T N +
Sbjct: 348 KAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGV-KPNNGTYNCL 406
Query: 293 LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF 352
+ + + GQ + + + ++ ++P+ T+ +L+ K ++ S+ + M +
Sbjct: 407 IHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGI 466
Query: 353 PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVIS 412
+ + Y ++ + G M M A G+ + + F +I YA + +V+
Sbjct: 467 KPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMH 526
Query: 413 SVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
+ ++ NV Y +I A K + + + +M + P++ F+ +
Sbjct: 527 IFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLC 586
Query: 473 KEGMNDKVYALEQEKLQML 491
DK +E+ L+ML
Sbjct: 587 TV---DKWEKVEELFLEML 602
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 144/342 (42%), Gaps = 16/342 (4%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P Y +L GK G + N MV GI P ++ ++ AY + ++IDE
Sbjct: 467 KPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMH 526
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+MK P+V TY TLI A R + + M VTPN V N ++ G
Sbjct: 527 IFIKMKQ-QGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGL 585
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
++++E + ML +PD+ NT+L +G+V R + G+ P+
Sbjct: 586 CTVDKWEKVEELFLEMLNQGI-RPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPD 644
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
++N LI + D+ +++ M +YN ++ + G + F
Sbjct: 645 VISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFR 704
Query: 381 QMHAEGMKADTKTFCCLINGYANAG-------LFHKVISSVRLASKLQIAENVSFYNAVI 433
+M +G+ +T+ ++NG +G L+ +I S +L S + Y+ ++
Sbjct: 705 EMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWS-------ICTYSIIL 757
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
K + E ++++ + + D TF+IM + K G
Sbjct: 758 DGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGG 799
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 138/348 (39%), Gaps = 4/348 (1%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
LQ +M+ E P + L+ L + E ++F EM+ +GI P + +L
Sbjct: 560 VLQFNQMINEG--VTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVL 617
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
C+ + EA ++ M + +PDV +Y+TLI A R + L M +
Sbjct: 618 CNLCKEGRVMEARRLIDSMVCM-GLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGL 676
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PN V+ N +L GY KAG D + ML P V T NTIL+ G+
Sbjct: 677 KPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGV-TPGVETYNTILNGLFRSGRFSEAR 735
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
Y T++I++ + K +D+ + + + + T+N +I+
Sbjct: 736 ELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGL 795
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G + F + A G+ T+ + G ++ + K A N
Sbjct: 796 FKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNS 855
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
NA+I + ++ ++ EK+ ++ T S++ +++E
Sbjct: 856 HMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSRE 903
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 175/376 (46%), Gaps = 5/376 (1%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
NTV +T + ++ L M+K+ P TY ++ L + G+ A +F+
Sbjct: 194 NTVVKTLCEDSRSQRALDLLHT--MVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFH 251
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
EM+++G+ P YT+++ A C+ +D+A + L QM + QP+ TY+ +I +
Sbjct: 252 EMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMIS-NGFQPNKVTYNCMIHGYSIS 310
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
+++ ++++M + + PN VT N + K G + M KP++ T
Sbjct: 311 GQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGH-KPNLVT 369
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
+ +L +A +G M + GI + R FNI+I AYGK+ M D+ + M+
Sbjct: 370 YSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQ 429
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
+ + TY VI AFS MG F QM A G+K + + LI G+ G
Sbjct: 430 EQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLV 489
Query: 409 KVISSV-RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
K V + S+ N+ F+N++I++ K ++E ++ + RPD TF+ +
Sbjct: 490 KAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSL 549
Query: 468 TEAYAKEGMNDKVYAL 483
+ Y G +K + +
Sbjct: 550 IDGYGLVGKIEKAFGV 565
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 144/359 (40%), Gaps = 45/359 (12%)
Query: 160 PELARKVFNEMVEEGIEPTPEL-----YTALLAAYCRNSLIDEAFVTLNQ-MKTLPNCQP 213
P LA +FN + E P L Y L+ CR F + +KT +
Sbjct: 95 PSLAVALFNRICREEARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKT--GLKM 152
Query: 214 DVYTYSTLIKACVDAMRFE-LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
DV S L+K A R + ++ L M E V P+T++ N V+ + + +
Sbjct: 153 DVIVASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDL 212
Query: 273 LSGMLE-SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
L M++ S C P+V T NT++ +G+V + + G+ P+ T+ +I A
Sbjct: 213 LHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDAL 272
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS------------------------ 367
K R DK V+ M F TYN +I +S
Sbjct: 273 CKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNI 332
Query: 368 -----------DMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
G +K F+ M A+G K + T+ L++GYA G F +++
Sbjct: 333 VTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNS 392
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
I + +N VI A K + E ++ +M+E+ PD+ T+ I+ A+++ G
Sbjct: 393 MEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMG 451
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 156/392 (39%), Gaps = 41/392 (10%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
++P TY LL G +FN M GI ++ ++ AY + ++DE
Sbjct: 363 HKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETM 422
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+ QM+ PD TY +I A R + M + P + + ++ G
Sbjct: 423 LIFTQMQE-QGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQG 481
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ G + + ++S M+ +P++ N+I++ +G+V ++ + G P
Sbjct: 482 FCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERP 541
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ TFN LI YG +K V++ M +YN +I+ + G F
Sbjct: 542 DVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILF 601
Query: 380 EQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISS------------------- 413
+M ++G+K T T+ +++G N G + H++I S
Sbjct: 602 GEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRN 661
Query: 414 ------VRLASKL---QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
+ + KL + N++ N +I A K E + ++ + P++ T+
Sbjct: 662 NCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTY 721
Query: 465 SIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
+M + KEG + E + + L+E SG
Sbjct: 722 GVMIKNLLKEGSVE-----EADNMFSLMEKSG 748
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/385 (17%), Positives = 165/385 (42%), Gaps = 37/385 (9%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+ + +F ++EQ P TY ++ + G+ A FN+M+ G++P +Y +L
Sbjct: 420 ETMLIFTQMQEQGVI-PDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSL 478
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +C + + +A +++M + +P++ ++++I + R ++ +
Sbjct: 479 IQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIG 538
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ +T N ++ GYG G ++ VL M+ SA +PDV + NT++ + G++D
Sbjct: 539 ERPDVITFNSLIDGYGLVGKIEKAFGVLDAMI-SAGIEPDVVSYNTLIDGYCRNGRIDDG 597
Query: 306 ERWYEKFRNFGIDPETRTFNILI-GAY------GKKRMY--------------------- 337
+ + + G+ P T T+ I++ G + G K+M
Sbjct: 598 LILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGG 657
Query: 338 -------DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
D+ ++ + + + + + N +I+A + + + F+ + A G+ +
Sbjct: 658 LCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPN 717
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
T+ +I G + + L K A + N +I ++ ++++
Sbjct: 718 ASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMF 777
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEG 475
++ K ++ T S++ +++EG
Sbjct: 778 KVDGKRISLEASTVSLLMALFSREG 802
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 92/206 (44%), Gaps = 4/206 (1%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
EML + +P TY +L L G+ A+K+ +EM+E G +L CR
Sbjct: 603 EMLSKG--VKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCR 660
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
N+ DEA ++ + N + ++ +T+I A + E + L+ + + PN
Sbjct: 661 NNCDDEAIAMFKKLGAM-NVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNAS 719
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
T +++ K G ++ + + S ++E + C P +N I+ V KG++ + K
Sbjct: 720 TYGVMIKNLLKEGSVEEADNMFS-LMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFK 778
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMY 337
I E T ++L+ + ++ Y
Sbjct: 779 VDGKRISLEASTVSLLMALFSREGKY 804
>gi|255574497|ref|XP_002528160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532417|gb|EEF34211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 569
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 172/367 (46%), Gaps = 8/367 (2%)
Query: 131 FEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYC 190
FE+++ + P E TY LL SG E A +F EM + G+ P+ +Y A +
Sbjct: 172 FELIEARCI--PTEDTYALLLKAYCTSGLLEKAEAIFAEMRKYGLPPSAIVYNAYIDGLM 229
Query: 191 RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT 250
+ A +MK CQP TY+ LI A + + L+ +M + PN
Sbjct: 230 KAGNPQRAVEIFQRMKR-DCCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQKCKPNI 288
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYE 310
T ++ + + G+ ++ E + + E +PDV+ N ++ ++ G +
Sbjct: 289 CTYTALVNAFAREGLCEKAEEIFEQLQEDGH-EPDVYAYNALMEAYSRAGFPYGAAEIFS 347
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
++ G +P+ ++NI++ AYG+ +++ +V E M++L T ++ ++ A+S G
Sbjct: 348 LMQHMGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAG 407
Query: 371 DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYN 430
D E ++H G++ DT ++N Y G F K+ + A ++S YN
Sbjct: 408 DVAKCEDIVNELHESGLEPDTFVLNSMLNLYGRLGQFGKMEEVLTAMESGPYATDISTYN 467
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
+I+ +A +ME +++ + K+ +PD T++ AY+++ K+Y E +
Sbjct: 468 ILINIYGRAGFFEKMEGLFQSLAAKNLKPDVVTWTSRLGAYSRK----KLYTKCLEIFEE 523
Query: 491 LLEASGH 497
+++A H
Sbjct: 524 MIDAGCH 530
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 152/327 (46%), Gaps = 3/327 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+++F+ +K + QP TY L+ L GK+ Q +A K+FNEM + +P YTAL
Sbjct: 236 RAVEIFQRMK-RDCCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQKCKPNICTYTAL 294
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A+ R L ++A Q++ + +PDVY Y+ L++A A ++ M
Sbjct: 295 VNAFAREGLCEKAEEIFEQLQEDGH-EPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMG 353
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ + NI++ YG+ G+ + + V M + P + + +LS ++ G V
Sbjct: 354 CEPDRASYNIMVDAYGRGGLHEDAQAVFEEM-KRLGITPTMKSHMLLLSAYSKAGDVAKC 412
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E + G++P+T N ++ YG+ + KM V+ M + STYN +I
Sbjct: 413 EDIVNELHESGLEPDTFVLNSMLNLYGRLGQFGKMEEVLTAMESGPYATDISTYNILINI 472
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ G + ME F+ + A+ +K D T+ + Y+ L+ K + +
Sbjct: 473 YGRAGFFEKMEGLFQSLAAKNLKPDVVTWTSRLGAYSRKKLYTKCLEIFEEMIDAGCHPD 532
Query: 426 VSFYNAVISACIKADDLMEMERVYKRM 452
++S+C D + ++ V + M
Sbjct: 533 GRTAKVLLSSCSSEDQIEQVTTVIRTM 559
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 93/210 (44%)
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+D + + +L ++ + DV N ++ + K M E Y + P T+
Sbjct: 128 WDLILLICQWILYRSSFQSDVMIFNLVIDAYGRKSLYKMAETTYFELIEARCIPTEDTYA 187
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
+L+ AY + +K ++ MRK P ++ YN I+ G+ + F++M +
Sbjct: 188 LLLKAYCTSGLLEKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIFQRMKRD 247
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
+ T+T+ LIN + A + + + N+ Y A+++A + +
Sbjct: 248 CCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKA 307
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
E ++++++E PD ++ + EAY++ G
Sbjct: 308 EEIFEQLQEDGHEPDVYAYNALMEAYSRAG 337
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 169/365 (46%), Gaps = 5/365 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL++++ ++ + +P ++ L+ L + G+ + A EM G+ P +YT +
Sbjct: 279 EALKIYKEMRHRGI-KPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 337
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +CR L+ +A ++M C PDV TY+TL+ R E L +M ER
Sbjct: 338 IGGFCRAGLMSDALRVRDEMVGC-GCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERG 396
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
V P+ T ++ GY G D+ ++ ML +PD+ T NT++ +G +D
Sbjct: 397 VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL-RPDIVTYNTLIDGMCRQGDLDKA 455
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
++ + I P T++ILI ++ +K ++ D + E + K P TYN++I+
Sbjct: 456 NDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILP-NIMTYNSIIK 514
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
+ G+ + ++M + D T+ LI+GY H + + K ++
Sbjct: 515 GYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQP 574
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
+V YN +I+ ++ E ++++M K PD T+ M + G + + + L
Sbjct: 575 DVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLH 634
Query: 485 QEKLQ 489
E LQ
Sbjct: 635 DEMLQ 639
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 159/353 (45%), Gaps = 6/353 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY +L L +SG + A +VF EM + G+ P +T L+ +CR I+EA
Sbjct: 223 KPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALK 282
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M+ +PD+ ++S LI + + ++M + P+ V +V+GG+
Sbjct: 283 IYKEMRH-RGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGF 341
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+AG+ RV M+ C PDV T NT+L+ + ++ E + R G+ P+
Sbjct: 342 CRAGLMSDALRVRDEMV-GCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPD 400
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
TF LI Y + DK + + M + TYN +I+ GD ++
Sbjct: 401 LCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWD 460
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
MH+ + + T+ LI+ + G + I N+ YN++I ++
Sbjct: 461 DMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSG 520
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYAL---EQEKLQ 489
++ + ++ ++M PD T++ + Y KE M+D L E+EK+Q
Sbjct: 521 NVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQ 573
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 124/274 (45%), Gaps = 1/274 (0%)
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
N + + YT + ++ A+ F+ ++ + +M++R V P+ VT N+++ +AG +
Sbjct: 151 NSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAA 210
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
++ M+ S KP + T N++L G D +++ +FG+ P+ R+F ILIG
Sbjct: 211 MALVDSMV-SKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIG 269
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+ + ++ + + MR +++ +I F+ G H +M G+
Sbjct: 270 GFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVP 329
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
D + +I G+ AGL + +V YN +++ K L++ E +
Sbjct: 330 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 389
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
M+E+ PD TF+ + Y EG DK L
Sbjct: 390 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQL 423
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 82/167 (49%), Gaps = 2/167 (1%)
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYM-RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
T T NI++ Y K +DK+ +V+ M ++ FP T+N +++A GDA+
Sbjct: 156 TYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFP-DVVTHNVMVDARFRAGDAEAAMALV 214
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
+ M ++G+K T+ ++ G +G++ K + +A +V + +I +
Sbjct: 215 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 274
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
++ E ++YK M+ + +PD +FS + +A+ G D A +E
Sbjct: 275 GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLRE 321
>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Cucumis sativus]
Length = 576
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 166/354 (46%), Gaps = 6/354 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E TY LL KSG E A VF EM + G+ P+ +Y A + + +A
Sbjct: 188 PTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEI 247
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
++MK CQP TY+ LI + + + ++ +M + PN T ++
Sbjct: 248 FHRMKR-DGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALA 306
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G+ ++ E + M E+ +PDV+ N ++ ++ G + ++ G +P+
Sbjct: 307 REGLCEKAEEIFEQMQEAGY-EPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDR 365
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
++NI++ AYG+ +++ +V E M+++ T ++ ++ A+S G+ E Q
Sbjct: 366 ASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQ 425
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
MH G+K DT ++N Y G F K+ K ++S YN +I+ +A
Sbjct: 426 MHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGF 485
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
+ ME +++ + K+ PD T++ AY+++ K+Y E + +++A
Sbjct: 486 VERMEELFQLLPAKNLEPDVVTWTSRIGAYSRK----KLYKRCLELFEKMIDAG 535
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 144/333 (43%), Gaps = 2/333 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P Y + L K G A ++F+ M +G +PT + YT L+ Y + S A
Sbjct: 223 PSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTMLINVYGKESKSHMAQNI 282
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
++M+T C+P++ T++ L+ A E E +++ M E P+ N ++ Y
Sbjct: 283 FDEMRT-QRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYS 341
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+AG + S +++ C+PD + N ++ + G + + +E+ + GI P
Sbjct: 342 RAGFPYGAAEIFS-LMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTM 400
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
++ +L+ AY K ++ M K + N+++ + +G ME F
Sbjct: 401 KSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFST 460
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M +AD T+ LIN Y AG ++ +L + +V + + I A +
Sbjct: 461 MQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKL 520
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
++++M + C PD T ++ A + E
Sbjct: 521 YKRCLELFEKMIDAGCYPDGGTAKVLLSACSSE 553
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 134/293 (45%), Gaps = 3/293 (1%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A +F+ ++ Q +P T+ L+ L + G E A ++F +M E G EP Y AL+
Sbjct: 279 AQNIFDEMRTQRC-KPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALM 337
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+Y R A + M+ + C+PD +Y+ ++ A A E + ++++M +
Sbjct: 338 ESYSRAGFPYGAAEIFSLMQHM-GCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGI 396
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
TP + ++L Y AG + E ++ G + + KPD + MN++L+++ GQ ME
Sbjct: 397 TPTMKSHMLLLSAYSSAGNVAKCEDII-GQMHKSGLKPDTFVMNSMLNLYGRLGQFGKME 455
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ + + T+NILI YG+ ++M + + + T+ + I A+
Sbjct: 456 DLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAY 515
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
S K FE+M G D T L++ ++ +V + VR K
Sbjct: 516 SRKKLYKRCLELFEKMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVVRTMHK 568
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 108/246 (43%), Gaps = 1/246 (0%)
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M++ + P+ + N+++ YG+ ++ +E +LES C P T +L + G
Sbjct: 146 MNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESH-CIPTEDTYALLLKAYCKSG 204
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
++ E + + R +G+ P +N I K K + M++ T+ TY
Sbjct: 205 LLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYT 264
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+I + + + F++M + K + TF L+N A GL K +
Sbjct: 265 MLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEA 324
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+V YNA++ + +A ++ M+ C PD +++IM +AY + G+++
Sbjct: 325 GYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDA 384
Query: 481 YALEQE 486
A+ +E
Sbjct: 385 QAVFEE 390
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 87/200 (43%)
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
++ +T +PDV N ++ + + +E Y + P T+ +L+ AY K
Sbjct: 145 IMNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSG 204
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
+ +K +V MRK ++ YN I+ G+ F +M +G + T T+
Sbjct: 205 LLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYT 264
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
LIN Y H + + N+ + A+++A + + E ++++M+E
Sbjct: 265 MLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEA 324
Query: 456 HCRPDSETFSIMTEAYAKEG 475
PD ++ + E+Y++ G
Sbjct: 325 GYEPDVYAYNALMESYSRAG 344
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 166/344 (48%), Gaps = 6/344 (1%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
++P +Y ++ L K+G +A +VF +M + +P Y ++ + C++ L++EA
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256
Query: 200 VTLNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVL 257
L++M + +P PDV TY+T++ + L+++M R+V P+TVT NI++
Sbjct: 257 EFLSEMVDRGIP---PDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILV 313
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
G K GM + V M E +P+ +T N ++ + Q+D + G
Sbjct: 314 DGLCKEGMVSEARCVSETMTEKGA-EPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGC 372
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P ++NILI Y K + ++ ++ M + + TY+ +++ +G +
Sbjct: 373 APNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALN 432
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
F++M + G+ D + L++G+ G + + ++ + +I N+ Y +I
Sbjct: 433 LFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMF 492
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
A L + ++ ++ RPD T+++M + KEG++D+ Y
Sbjct: 493 IAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAY 536
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 145/337 (43%), Gaps = 2/337 (0%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
L+ L + + A V +M + GI+P + L+ C I EA N+M
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEM-VWS 195
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+P+V +Y+T+I + +++ M++ PN VT N ++ K + ++
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEA 255
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
LS M++ PDV T NTIL F + GQ++ R +++ + P+T TFNIL+
Sbjct: 256 VEFLSEMVDRGI-PPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVD 314
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
K+ M + V E M + + TYN +++ + M +G
Sbjct: 315 GLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAP 374
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
+ ++ LINGY + ++ + S+ + + Y+ ++ + E ++
Sbjct: 375 NLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLF 434
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
K M PD +SI+ + + K G D+ L +E
Sbjct: 435 KEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKE 471
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 147/345 (42%), Gaps = 4/345 (1%)
Query: 131 FEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYC 190
+ M++ P +P + K L + K Q A + N+M G+ L+ C
Sbjct: 85 YRMVRMNP--RPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLC 142
Query: 191 RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT 250
R S +D A + +M L QPD T++TLI + + + L+ +M PN
Sbjct: 143 RLSHVDFAVSVMGKMFKL-GIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNV 201
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYE 310
++ N V+ G K G RV M E KP+V T NTI+ V+ +
Sbjct: 202 ISYNTVINGLCKNGNTIMAVRVFRKM-EQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLS 260
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
+ + GI P+ T+N ++ + ++ + + + M + T+N +++ G
Sbjct: 261 EMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEG 320
Query: 371 DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYN 430
E M +G + + T+ L++GY + I + + A N+S YN
Sbjct: 321 MVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYN 380
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+I+ K+ + E +R+ M EK+ PD+ T+S + + + G
Sbjct: 381 ILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVG 425
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 124/262 (47%), Gaps = 8/262 (3%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ Q + A KV M+ +G P Y L+ YC++ ++EA
Sbjct: 338 EPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKR 397
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L++M N PD TYSTL++ R L+++M + P+ + +I+L G+
Sbjct: 398 LLSEMSE-KNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGF 456
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G D+ ++L M E KP++ ++ G++++ + + K GI P+
Sbjct: 457 CKHGHLDEALKLLKEMHERRI-KPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPD 515
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ---FPWTSSTYNNVIEAFSDMGDAKHMEY 377
T+N++I K+ + D+ E+ RK++ F S +YN +I+ F D+
Sbjct: 516 IWTYNVMIKGLLKEGLSDE---AYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQ 572
Query: 378 TFEQMHAEGMKADTKTFCCLIN 399
++M + AD+ TF L++
Sbjct: 573 LIDEMVGKRFSADSSTFQMLLD 594
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 84/232 (36%), Gaps = 41/232 (17%)
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
+P V L A K Q + FG+ + N+LI + D S
Sbjct: 93 RPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVS 152
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
VM M KL + T+N +I + G K F +M G + + ++ +ING
Sbjct: 153 VMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLC 212
Query: 403 NAGLFHKVISSVRLASKLQIAE---NVSFYNAVISACIK--------------------- 438
G I +VR+ K++ NV YN +I + K
Sbjct: 213 KNG---NTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPP 269
Query: 439 --------------ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
L E R++K M ++ PD+ TF+I+ + KEGM
Sbjct: 270 DVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGM 321
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 150/341 (43%), Gaps = 6/341 (1%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+ P TY ++ L KS + E A +FNEM G P + ++ C+ S ID+A
Sbjct: 111 HVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQAC 170
Query: 200 VTLNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVL 257
++M K +P PD ++Y LI A + L+Q M + +TP+ VT N+V+
Sbjct: 171 QVFHEMEAKDIP---PDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVI 227
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
G A D+ + M S C+P +T N ++ +G++D R ++ + G
Sbjct: 228 HGMCLAYTLDEALELFKSM-RSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGH 286
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P+ T++ LI D ++E M K Q T T N +I G K
Sbjct: 287 VPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEARE 346
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
+ M + G D T+ L++G+ AG + + +A NV Y A++S
Sbjct: 347 VLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLC 406
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
KA+ L E V+ +MK C P+ T++ + + G D
Sbjct: 407 KANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVD 447
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 150/376 (39%), Gaps = 35/376 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA--- 198
P +Y L+ L K+G+ AR +F +++ G+ P+ YT+L+ C + D+A
Sbjct: 8 PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67
Query: 199 FVTLNQMKTLP-----------NCQ--------------------PDVYTYSTLIKACVD 227
F +N+ P +C+ PDV TY+T++
Sbjct: 68 FADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
+ R E L+ +M+ TPN + N ++ G + DQ +V M E+ PD W
Sbjct: 128 SSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM-EAKDIPPDSW 186
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
+ ++ A G+++ + +++ + GI P T+N++I D+ + + M
Sbjct: 187 SYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM 246
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
R + T+N +I+A G ++M +G D T+ LI+G +
Sbjct: 247 RSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARV 306
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ K Q V N +I KA + E V M PD T++ +
Sbjct: 307 DDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTL 366
Query: 468 TEAYAKEGMNDKVYAL 483
+ + G ++ L
Sbjct: 367 VHGHCRAGQTERAREL 382
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 114/300 (38%), Gaps = 38/300 (12%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA- 184
QA QVF ++ + P +Y L+ L K+G+ A K+F M++ GI P+ Y
Sbjct: 168 QACQVFHEMEAKDI-PPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVV 226
Query: 185 ----------------------------------LLAAYCRNSLIDEAFVTLNQMKTLPN 210
L+ A+C+ +DEAF L +M T
Sbjct: 227 IHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRM-TDDG 285
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
PDV TYSTLI R + L +DM +R P VTQN ++ G KAG +
Sbjct: 286 HVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAR 345
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
VL M+ S PDV T NT++ GQ + G+ P T+ L+
Sbjct: 346 EVLDAMVSSGQ-SPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSG 404
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
K + V M+ TY +I F G F +M G+ D
Sbjct: 405 LCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPD 464
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 116/281 (41%), Gaps = 15/281 (5%)
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
N PD ++Y LI A + L+Q + VTP+TV ++ G A FD
Sbjct: 5 NVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDA 64
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+ + M C P T N ++ +G ++ +K G P+ T+N ++
Sbjct: 65 RELFADM-NRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMD 123
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
K ++ + M +L ++N +I F +M A+ +
Sbjct: 124 GLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPP 183
Query: 390 DTKTFCCLINGYANAG-------LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
D+ ++ LI+G A AG LF +++ S I + YN VI A L
Sbjct: 184 DSWSYGILIDGLAKAGKLNEAYKLFQRMLDS-------GITPSAVTYNVVIHGMCLAYTL 236
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
E ++K M+ K CRP TF+I+ +A+ K G D+ + L
Sbjct: 237 DEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRL 277
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 86/206 (41%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
PD W+ ++ A G+++ ++K + G+ P T + LI +D +
Sbjct: 8 PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
M + P + TYN +I+A G + ++M +G D T+ +++G
Sbjct: 68 FADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
+ + + +L N +N +I + + + +V+ M+ K PDS +
Sbjct: 128 SSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWS 187
Query: 464 FSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ I+ + AK G ++ Y L Q L
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFQRMLD 213
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 9/226 (3%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
+M+K Q +P T L+ L K+G+ + AR+V + MV G P Y L+ +CR
Sbjct: 315 DMVKRQ--CKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCR 372
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
+ A L+ M P+V TY+ L+ A R ++ M PN
Sbjct: 373 AGQTERARELLSDM-VARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLF 431
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ----VDMMER 307
T ++ G+ AG D ++ M+ A PD T+ + G+ ++++
Sbjct: 432 TYTALILGFCSAGQVDGGLKLFGEMV-CAGISPDHVVYGTLAAELCKSGRSARALEILRE 490
Query: 308 WYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
E R+ E F + G +M + V + +R Q P
Sbjct: 491 GRESLRSEAWGDEVYRFAV-DGLLEAGKMEMALGFVRDMVRGGQLP 535
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 66/158 (41%), Gaps = 6/158 (3%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A VF +K P TY L++ +GQ + K+F EMV GI P +Y L
Sbjct: 413 EACGVFAQMKSSGC-APNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 471
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQP---DVYTYSTLIKACVDAMRFELIETLYQDMD 242
A C++ A L + + + +VY ++ + ++A + E+ +DM
Sbjct: 472 AAELCKSGRSARALEILREGRESLRSEAWGDEVYRFA--VDGLLEAGKMEMALGFVRDMV 529
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
P ++ G K+G + VL +++ A
Sbjct: 530 RGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLA 567
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 164/349 (46%), Gaps = 5/349 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY LL + KS A +V +EM +G P Y ++ CR +D+A
Sbjct: 208 QPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARE 267
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
LN++ + QPD +Y+T++K A R+E +E L+ +M E++ PN VT ++++ +
Sbjct: 268 FLNRLSSY-GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 326
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ GM ++ +VL M C + N +++ +G+VD ++ ++G P+
Sbjct: 327 CRGGMVERAIQVLEQM-SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 385
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T ++ ++ + ++ +++ M + P T+N I G + E
Sbjct: 386 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIE 445
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
QM G + + T+ L+NG+ G +V S++ L + N Y +++ A+
Sbjct: 446 QMSEHGCEVNIVTYNALVNGFCVQG---RVDSALELFYSMPCKPNTITYTTLLTGLCNAE 502
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
L + M +K C P+ TF+++ + ++G+ D+ L ++ ++
Sbjct: 503 RLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMME 551
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 138/339 (40%), Gaps = 7/339 (2%)
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
KL+ L + G+ A +V G Y L+A YCR +D A + M
Sbjct: 114 KLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPV- 172
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
PD YTY+ +I+ D R +L DM R P+ VT ++L K+ F Q
Sbjct: 173 ---APDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQ 229
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF-NIL 327
VL M + C P++ T N I++ +G+VD + + ++G P+T ++ +L
Sbjct: 230 AMEVLDEM-RAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVL 288
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
G KR D E M K P T++ ++ F G + EQM G
Sbjct: 289 KGLCAAKRWEDVEELFAEMMEKNCMP-NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGC 347
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
A+T +IN G + + + Y V+ +A+ + +
Sbjct: 348 AANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKE 407
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ K M K+C P+ TF+ ++G+ ++ L ++
Sbjct: 408 LLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQ 446
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 132/298 (44%), Gaps = 8/298 (2%)
Query: 132 EMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
E+LKE + P E T+ + +L + G E A + +M E G E Y AL+ +
Sbjct: 407 ELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGF 466
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
C +D A L ++P C+P+ TY+TL+ +A R + L +M ++ PN
Sbjct: 467 CVQGRVDSA---LELFYSMP-CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPN 522
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
VT N+++ + + G+ D+ ++ M+E C P++ T NT+L +
Sbjct: 523 VVTFNVLVSFFCQKGLMDEAIELVEQMMEHG-CTPNLITYNTLLDGITKDCNSEEALELL 581
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
+ G+ P+ T++ +IG ++ ++ + ++ L + YN ++ A
Sbjct: 582 HGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKR 641
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR-LASKLQIAENV 426
+ F M + G + T+ LI G AN + +R L S+ + +N+
Sbjct: 642 CNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLNKNL 699
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/400 (19%), Positives = 148/400 (37%), Gaps = 65/400 (16%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+QP +Y +L L + + E ++F EM+E+ P + L+ +CR +++ A
Sbjct: 277 FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAI 336
Query: 200 VTLNQMK--------TLPN--------------------------CQPDVYTYSTLIKAC 225
L QM TL N C PD +Y+T++K
Sbjct: 337 QVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 396
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE------- 278
A R+E + L ++M ++ PN VT N + + G+ +Q ++ M E
Sbjct: 397 CRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNI 456
Query: 279 ------------------------SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRN 314
S CKP+ T T+L+ N ++D +
Sbjct: 457 VTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 516
Query: 315 FGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKH 374
P TFN+L+ + +K + D+ ++E M + TYN +++ + +++
Sbjct: 517 KDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEE 576
Query: 375 MEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVIS 434
+ + G+ D T+ +I + + I + L + YN ++
Sbjct: 577 ALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILL 636
Query: 435 ACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
A K + + M C P+ T+ + E A E
Sbjct: 637 ALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANE 676
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 84/226 (37%), Gaps = 53/226 (23%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY LL L + + + A ++ EM+++ P + L++ +C+ L+DEA
Sbjct: 485 KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIE 544
Query: 201 TLNQM---KTLPN--------------CQ-----------------PDVYTYSTLIKACV 226
+ QM PN C PD+ TYS++I
Sbjct: 545 LVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLS 604
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
R E ++ + + + P V N +L K D + M+ + C P+
Sbjct: 605 REDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNG-CMPNE 663
Query: 287 WTMNTILSVFAN----------------KGQV--DMMERWYEKFRN 314
T T++ AN +G + +++E W KF N
Sbjct: 664 LTYITLIEGLANEDFLKETRDLLRELCSRGVLNKNLLEEWRPKFSN 709
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 150/339 (44%), Gaps = 2/339 (0%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+ P TY ++ L KSG+ E A +FNEM G P + ++ C+ S ID+A
Sbjct: 111 HVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQAC 170
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
++M+ + PD ++Y LI A + L++ M + +TP+ VT N+V+ G
Sbjct: 171 QVFHEMEA-RDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHG 229
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
A D+ + M S C+P +T N ++ +G++D R ++ + G P
Sbjct: 230 MCLAYTLDEALELFKSM-RSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVP 288
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ T++ LI D ++E M K Q T T N +I G K
Sbjct: 289 DVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVL 348
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
+ M + G D T+ L++G+ AG + + +A NV Y A++S KA
Sbjct: 349 DAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKA 408
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ L E V+ +MK C P+ T++ + + G D
Sbjct: 409 NRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVD 447
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 149/376 (39%), Gaps = 35/376 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA--- 198
P +Y L+ L K+G+ AR +F +++ G+ P+ YT+L+ C + D+A
Sbjct: 8 PDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67
Query: 199 FVTLNQMKTLP-----------NCQ--------------------PDVYTYSTLIKACVD 227
F +N+ P +C+ PDV TY+T++
Sbjct: 68 FADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
+ R E L+ +M+ TPN + N ++ G + DQ +V M E+ PD W
Sbjct: 128 SGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM-EARDIPPDSW 186
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
+ ++ A G+++ + + + + GI P T+N++I D+ + + M
Sbjct: 187 SYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM 246
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
R + T+N +I+A G ++M +G D T+ LI+G +
Sbjct: 247 RSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARV 306
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ K Q V N +I KA + E V M PD T++ +
Sbjct: 307 DDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTL 366
Query: 468 TEAYAKEGMNDKVYAL 483
+ + G ++ L
Sbjct: 367 VHGHCRAGQTERAREL 382
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 114/300 (38%), Gaps = 38/300 (12%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA- 184
QA QVF ++ + P +Y L+ L K+G+ A K+F M++ GI P+ Y
Sbjct: 168 QACQVFHEMEARDI-PPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVV 226
Query: 185 ----------------------------------LLAAYCRNSLIDEAFVTLNQMKTLPN 210
L+ A+C+ +DEAF L +M T
Sbjct: 227 IHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRM-TDDG 285
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
PDV TYSTLI R + L +DM +R P VTQN ++ G KAG +
Sbjct: 286 HVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAR 345
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
VL M+ S PDV T NT++ GQ + G+ P T+ L+
Sbjct: 346 EVLDAMVSSGQ-SPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSG 404
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
K + V M+ TY +I F G F +M G+ D
Sbjct: 405 LCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPD 464
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 112/274 (40%), Gaps = 1/274 (0%)
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
N PD ++Y LI A + L+Q + VTP+TV ++ G A FD
Sbjct: 5 NVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDA 64
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+ + M C P T N I+ +G ++ +K G P+ T+N ++
Sbjct: 65 RELFADM-NRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMD 123
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
K ++ + M +L ++N +I F +M A +
Sbjct: 124 GLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPP 183
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
D+ ++ LI+G A AG ++ R I + YN VI A L E ++
Sbjct: 184 DSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELF 243
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
K M+ K CRP TF+I+ +A+ K G D+ + L
Sbjct: 244 KSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRL 277
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 87/206 (42%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
PD W+ ++ A G+++ ++K + G+ P T + LI +D +
Sbjct: 8 PDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
M + P + TYN +I+A G + ++M +G D T+ +++G
Sbjct: 68 FADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
+G + + +L N +N +I + + + +V+ M+ + PDS +
Sbjct: 128 SGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWS 187
Query: 464 FSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ I+ + AK G ++ Y L + L
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFRRMLD 213
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 9/226 (3%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
+M+K Q +P T L+ L K+G+ + AR+V + MV G P Y L+ +CR
Sbjct: 315 DMVKRQ--CKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCR 372
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
+ A L+ M P+V TY+ L+ A R ++ M PN
Sbjct: 373 AGQTERARELLSDM-VARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLF 431
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ----VDMMER 307
T ++ G+ AG D ++ M+ A PD T+ + G+ ++++
Sbjct: 432 TYTALILGFCSAGQVDGGLKLFGEMV-CAGISPDHVVYGTLAAELCKSGRSARALEILRE 490
Query: 308 WYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
E R+ E F + G +M + V + +R Q P
Sbjct: 491 GRESLRSEAWGDEVYRFAV-DGLLDAGKMEMALGFVRDMVRGGQLP 535
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 6/158 (3%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A VF +K P TY L++ +GQ + K+F EMV GI P +Y L
Sbjct: 413 EACGVFAQMKSSGC-APNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 471
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQP---DVYTYSTLIKACVDAMRFELIETLYQDMD 242
A C++ A L + + + +VY ++ + +DA + E+ +DM
Sbjct: 472 AAELCKSGRSARALEILREGRESLRSEAWGDEVYRFA--VDGLLDAGKMEMALGFVRDMV 529
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
P ++ G K+G + VL +++ A
Sbjct: 530 RGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLA 567
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 166/346 (47%), Gaps = 2/346 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY ++ L K G +LA + +M + IE +Y ++ C+ ID+AF
Sbjct: 217 QPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFA 276
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
N+M+T +PDV+TY++LI + R+ L +M ER + PN VT + ++ +
Sbjct: 277 LFNKMET-KGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAF 335
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + E++ M++ + PD++T +++++ F ++D + +E + P
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+N LI + K + ++ + M + + TYN +I+ GD + F+
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 454
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M ++G+ D T+ L++G G K + K ++ ++ YN +I KA
Sbjct: 455 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ + ++ + K +P+ ++ M + ++G+ ++ AL +E
Sbjct: 515 KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 149/339 (43%), Gaps = 8/339 (2%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y+P T LL S + A + ++MVE G +P + L+ ++ EA
Sbjct: 146 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAV 205
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
++QM CQPD+ TY ++ +L +L + M++ + + V N ++ G
Sbjct: 206 ALVDQM-VQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDG 264
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K D + + M E+ +PDV+T N+++S N G+ R I+P
Sbjct: 265 LCKYKHIDDAFALFNKM-ETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINP 323
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF---SDMGDAKHME 376
TF+ LI A+ K+ + + + M K TY+++I F + +AKHM
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM- 382
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
FE M ++ + T+ LI G+ A + + R S+ + N YN +I
Sbjct: 383 --FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+A D ++++K+M PD T+SI+ + K G
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 132/311 (42%), Gaps = 36/311 (11%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W A ++ + E+ P T+ L+ K G+ A K+++EM++ I+P Y
Sbjct: 305 RWSDASRLLSNMIERKI-NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
++L+ +C + +DEA M + +C P+V TY+TLIK A R E L+++M
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMIS-KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT--------------CK----- 283
+R + NTVT N ++ G +AG D +++ M+ CK
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482
Query: 284 ---------------PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
PD++T N ++ G+V+ + G+ P + +I
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
+ +K + ++ ++ M++ S YN +I A GD ++M + G
Sbjct: 543 SGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFV 602
Query: 389 ADTKTFCCLIN 399
D T +IN
Sbjct: 603 GDASTISMVIN 613
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 151/360 (41%), Gaps = 16/360 (4%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
A+ +F EM++ +P P + KLL + K + +L + M I Y
Sbjct: 63 DAIGLFGEMVQSRPL--PSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ +CR S + A L +M L +PD+ T S+L+ + R L M E
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKL-GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
P+TVT N ++ G + ++ M++ C+PD+ T +++ +G +D+
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGAVVNGLCKRGDIDL 238
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+K I+ + +N +I K + D ++ M TYN++I
Sbjct: 239 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLIS 298
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL---Q 421
+ G M + + TF LI+ + G K++ + +L ++
Sbjct: 299 CLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEG---KLVEAEKLYDEMIKRS 355
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK-----EGM 476
I ++ Y+++I+ D L E + +++ M K C P+ T++ + + + K EGM
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 91/191 (47%), Gaps = 2/191 (1%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ L ++G ++A+K+F +MV +G+ P Y+ LL C+ +++A V +
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ +PD+YTY+ +I+ A + E L+ + + V PN + ++ G+ + G+
Sbjct: 492 QK-SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGL 550
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
++ + + M E T PD NT++ G ++ R+ G + T +
Sbjct: 551 KEEADALFREMKEDGTL-PDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTIS 609
Query: 326 ILIGAYGKKRM 336
++I R+
Sbjct: 610 MVINMLHDGRL 620
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 135/294 (45%), Gaps = 16/294 (5%)
Query: 191 RNSLI----DEAFVTLNQM-KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
RN+L+ D+A +M ++ P P + ++ L+ A +F+L+ +L + M
Sbjct: 53 RNALLNLKLDDAIGLFGEMVQSRP--LPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLR 110
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
++ + + NI++ + + VL M++ +PD+ T++++L+ + + ++
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGY-EPDIVTLSSLLNGYCHSKRISDA 169
Query: 306 ERWYEKFRNFGIDPETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
++ G P+T TFN LI G + + + ++ V + +++ P TY V+
Sbjct: 170 VALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQP-DLVTYGAVVN 228
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ--- 421
GD ++M ++AD + +I+G + + + L +K++
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK---YKHIDDAFALFNKMETKG 285
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
I +V YN++IS + R+ M E+ P+ TFS + +A+ KEG
Sbjct: 286 IRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEG 339
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 67/165 (40%)
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P FN L+ A K + +D + S+ E M+ L+ + +YN +I F
Sbjct: 78 PSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
+M G + D T L+NGY ++ ++ V ++ + +N +I
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFL 197
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ E + +M ++ C+PD T+ + K G D +L
Sbjct: 198 HNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSL 242
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 160/347 (46%), Gaps = 2/347 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E TY L+ SG E A VF EM G+ + +Y A + + D+A
Sbjct: 188 PTEDTYALLIKAYCISGLLEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEI 247
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+MK C+P TY+ LI A + + L+ +M PN T ++ +
Sbjct: 248 FKRMKK-DACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFA 306
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G+ ++ E V M E A +PDV+ N ++ ++ G + ++ G +P+
Sbjct: 307 REGLCEKAEEVFEQMQE-AGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDR 365
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
++NIL+ AYGK D +V + M+++ T ++ ++ A+S MG E Q
Sbjct: 366 ASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQ 425
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G+K DT ++N Y G F K+ +R+ K ++S YN +I+ +A
Sbjct: 426 MCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQAGF 485
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
+ ME +++ + K +PD T++ AY+K+ + K + +E +
Sbjct: 486 IERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEMI 532
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 14/217 (6%)
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+D + + +L ++ KPDV N ++ F K E Y + P T+
Sbjct: 135 WDSIISICRWILLRSSFKPDVICYNLLIEAFGQKLLYKEAESTYLQLLEARCIPTEDTYA 194
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
+LI AY + +K +V MR P ++ YN I G++ E F++M +
Sbjct: 195 LLIKAYCISGLLEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKD 254
Query: 386 GMKADTKTFCCLINGYANAG-------LFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
K T+T+ LIN Y AG LFH+++S N+ Y A+++A +
Sbjct: 255 ACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSH-------DCKPNICTYTALVNAFAR 307
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ E V+++M+E PD ++ + EAY++ G
Sbjct: 308 EGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAG 344
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 90/213 (42%), Gaps = 36/213 (16%)
Query: 125 FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+ A ++F +++ +P +Y L+ GK+G + A VF +M GI PT + +
Sbjct: 347 YGAAEIFSLMQHMGC-EPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMV 405
Query: 185 LLAAYCRNSLIDEAFVTLNQM------------KTLPNCQ-------------------- 212
LL+AY + +++ LNQM ++ N
Sbjct: 406 LLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGS 465
Query: 213 --PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
D+ TY+ LI A E +E L+Q + + + P+ VT +G Y K ++ +
Sbjct: 466 YVADISTYNILINRYGQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCL 525
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+ M++ C PD T +L+ +N+ Q +
Sbjct: 526 EIFEEMIDDG-CYPDGGTAKVLLAACSNEDQTE 557
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 164/349 (46%), Gaps = 5/349 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY LL + KS A +V +EM +G P Y ++ CR +D+A
Sbjct: 177 QPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARE 236
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
LN++ + QPD +Y+T++K A R+E +E L+ +M E++ PN VT ++++ +
Sbjct: 237 FLNRLSSY-GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 295
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ GM ++ +VL M C + N +++ +G+VD ++ ++G P+
Sbjct: 296 CRGGMVERAIQVLEQM-SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 354
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T ++ ++ + ++ +++ M + P T+N I G + E
Sbjct: 355 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIE 414
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
QM G + + T+ L+NG+ G +V S++ L + N Y +++ A+
Sbjct: 415 QMSEHGCEVNIVTYNALVNGFCVQG---RVDSALELFYSMPCKPNTITYTTLLTGLCNAE 471
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
L + M +K C P+ TF+++ + ++G+ D+ L ++ ++
Sbjct: 472 RLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMME 520
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 138/339 (40%), Gaps = 7/339 (2%)
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
KL+ L + G+ A +V G Y L+A YCR +D A + M
Sbjct: 83 KLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPV- 141
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
PD YTY+ +I+ D R +L DM R P+ VT ++L K+ F Q
Sbjct: 142 ---APDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQ 198
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF-NIL 327
VL M + C P++ T N I++ +G+VD + + ++G P+T ++ +L
Sbjct: 199 AMEVLDEM-RAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVL 257
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
G KR D E M K P T++ ++ F G + EQM G
Sbjct: 258 KGLCAAKRWEDVEELFAEMMEKNCMP-NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGC 316
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
A+T +IN G + + + Y V+ +A+ + +
Sbjct: 317 AANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKE 376
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ K M K+C P+ TF+ ++G+ ++ L ++
Sbjct: 377 LLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQ 415
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 123/274 (44%), Gaps = 7/274 (2%)
Query: 132 EMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
E+LKE + P E T+ + +L + G E A + +M E G E Y AL+ +
Sbjct: 376 ELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGF 435
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
C +D A L ++P C+P+ TY+TL+ +A R + L +M ++ PN
Sbjct: 436 CVQGRVDSA---LELFYSMP-CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPN 491
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
VT N+++ + + G+ D+ ++ M+E C P++ T NT+L N +
Sbjct: 492 VVTFNVLVSFFCQKGLMDEAIELVEQMMEHG-CTPNLITYNTLLDGITNDCNSEEALELL 550
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
+ G+ P+ T++ +IG ++ ++ + ++ L + YN ++ A
Sbjct: 551 HGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKR 610
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ F M + G + T+ LI G AN
Sbjct: 611 CNTDGAIDFFAYMVSNGCMPNELTYITLIEGLAN 644
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 155/380 (40%), Gaps = 52/380 (13%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+QP +Y +L L + + E ++F EM+E+ P + L+ +CR +++ A
Sbjct: 246 FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAI 305
Query: 200 VTLNQMK--------TLPN--------------------------CQPDVYTYSTLIKAC 225
L QM TL N C PD +Y+T++K
Sbjct: 306 QVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 365
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
A R+E + L ++M ++ PN VT N + + G+ +Q ++ M E C+ +
Sbjct: 366 CRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG-CEVN 424
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
+ T N +++ F +G+VD E F + P T T+ L+ D + ++
Sbjct: 425 IVTYNALVNGFCVQGRVD---SALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLA 481
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
M + T+N ++ F G EQM G + T+ L++G N
Sbjct: 482 EMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDC 541
Query: 406 -------LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
L H ++S+ ++ ++ Y+++I + D + E +++ +++ R
Sbjct: 542 NSEEALELLHGLVSN-------GVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMR 594
Query: 459 PDSETFSIMTEAYAKEGMND 478
P + ++ + A K D
Sbjct: 595 PKAVIYNKILLALCKRCNTD 614
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 84/226 (37%), Gaps = 53/226 (23%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY LL L + + + A ++ EM+++ P + L++ +C+ L+DEA
Sbjct: 454 KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIE 513
Query: 201 TLNQM---KTLPN--------------CQ-----------------PDVYTYSTLIKACV 226
+ QM PN C PD+ TYS++I
Sbjct: 514 LVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLS 573
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
R E ++ + + + P V N +L K D + M+ S C P+
Sbjct: 574 REDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMV-SNGCMPNE 632
Query: 287 WTMNTILSVFAN----------------KGQV--DMMERWYEKFRN 314
T T++ AN +G + +++E W KF N
Sbjct: 633 LTYITLIEGLANEDFLKETRDLLRELCSRGVLNKNLLEEWRPKFSN 678
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 164/351 (46%), Gaps = 5/351 (1%)
Query: 127 ALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
AL++FE +LK+ +P TY L+ G ++A K+ +EM+ +G+EP Y A+
Sbjct: 192 ALEIFEELLKDN--CEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAI 249
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ ++D+AF L + + C+PD+ TY+ L++ + ++ E L +M
Sbjct: 250 IRGMCKEMMVDKAFELLRSLSS-RGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIG 308
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN VT +I++G + G ++ +L M E KPD + + +++ F +G++D+
Sbjct: 309 CKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGL-KPDAYCYDPLIAGFCREGRLDLA 367
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ E + G P+ +N ++ + D+ V E + ++ P S+YN + A
Sbjct: 368 TEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSA 427
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
GD ++ +G+ D T+ LI+ G+ + I + + N
Sbjct: 428 LWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPN 487
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
V YN ++ K + + V M EK C+P+ T+ ++ E G+
Sbjct: 488 VVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGL 538
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 167/378 (44%), Gaps = 12/378 (3%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A +V E+L+ + +P Y L+ K+ Q E A +V + M G P Y +
Sbjct: 122 KATRVMEILER--YGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIM 179
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ ++C +D A ++ NC+P V TY+ LI+A + ++ L +M +
Sbjct: 180 IGSFCSRGKLDLALEIFEELLK-DNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKG 238
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+T+T N ++ G K M D+ +L L S CKPD+ T N +L ++G+
Sbjct: 239 LEPDTLTYNAIIRGMCKEMMVDKAFELLRS-LSSRGCKPDIITYNILLRTLLSRGKWSEG 297
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E+ + + G P T +ILIG + ++ +++ M++ + Y+ +I
Sbjct: 298 EKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAG 357
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
F G E M ++G D + ++ G G + + ++ N
Sbjct: 358 FCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPN 417
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
VS YN + SA + D + ++ + PD T++ + ++GM D
Sbjct: 418 VSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVD------- 470
Query: 486 EKLQMLLEA-SGHWQQNI 502
E +++L++ SG ++ N+
Sbjct: 471 EAIELLVDMQSGRYRPNV 488
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 145/348 (41%), Gaps = 6/348 (1%)
Query: 143 KEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTL 202
KE MKLL ++G+ + MV++G P L T L+ + + I +A +
Sbjct: 68 KEVHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVM 127
Query: 203 NQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGK 262
++ +PDV+ Y+ LI + A + E + M R P+ VT NI++G +
Sbjct: 128 EILERYG--KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCS 185
Query: 263 AGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETR 322
G D + +L+ C+P V T ++ G +D+ + ++ + G++P+T
Sbjct: 186 RGKLDLALEIFEELLKD-NCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTL 244
Query: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
T+N +I K+ M DK ++ + TYN ++ G E +M
Sbjct: 245 TYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEM 304
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
+ G K + T LI G + ++ +R + + + Y+ +I+ + L
Sbjct: 305 ISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRL 364
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ-EKLQ 489
+ M C PD ++ + + G D+ ALE EKL
Sbjct: 365 DLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQ--ALEVFEKLD 410
>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 680
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 168/379 (44%), Gaps = 35/379 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
PK T + +++ LG SG+ A +F E+ E G+EP Y ALL Y R + +A
Sbjct: 274 PKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFV 333
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+++M+ +PD TYS LI A R+E + ++M+ +V PN+ + +L Y
Sbjct: 334 VSEMEK-AGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYR 392
Query: 262 KAGMFDQMERVLSGMLESAT----------------------------------CKPDVW 287
G + + +VL M S PD+
Sbjct: 393 DKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIV 452
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T NT++ G+ DM E + + + G P T+NI+I + G+++ ++++++ + M
Sbjct: 453 TWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKM 512
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
+ S TY +++ + G E + + G K + + LIN YA GL
Sbjct: 513 QSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLS 572
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+++ RL + + ++ N++I+A + E V + MKE + PD T++ +
Sbjct: 573 ELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTL 632
Query: 468 TEAYAKEGMNDKVYALEQE 486
+A + KV A+ +E
Sbjct: 633 MKALIRVEKFQKVPAVYEE 651
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 142/314 (45%), Gaps = 4/314 (1%)
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE--LIE 235
TP Y AL+ A RN +++A +++M+ QPD YS++I+ + + + +++
Sbjct: 168 TPLTYNALIGACARNGDVEKALNLMSKMRR-DGYQPDFVNYSSIIQYLTRSNKIDSPILQ 226
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
LY +++ + + N ++ G+ KAG + R L+ M +S P T+ ++
Sbjct: 227 KLYAEIETDKIEIDGHLMNDIIVGFSKAGDPTRAMRFLA-MAQSNGLNPKPSTLVAVILA 285
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
N G+ E +E+ R G++P TR +N L+ Y + V+ M K
Sbjct: 286 LGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPD 345
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
TY+ +I+ ++ G + ++M A ++ ++ F ++ Y + G + K ++
Sbjct: 346 EQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVLK 405
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + FYN +I K + L ++RM + PD T++ + + + K G
Sbjct: 406 DMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSG 465
Query: 476 MNDKVYALEQEKLQ 489
+D L E Q
Sbjct: 466 RHDMAEELFSEMQQ 479
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 37/164 (22%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+++W Q ++ Q QP TY L+ + GKSG+ A + + G +PT
Sbjct: 499 QQRWEQVTAFLSKMQSQGL-QPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTST 557
Query: 181 LYTALLAAYCR--------------------------NSLID---------EAFVTLNQM 205
+Y AL+ AY + NSLI+ EAF L M
Sbjct: 558 MYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYM 617
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
K N +PDV TY+TL+KA + +F+ + +Y++M TP+
Sbjct: 618 KE-NNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVASGCTPD 660
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 122/308 (39%), Gaps = 19/308 (6%)
Query: 177 PTPELYTALLAAYC----RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE 232
P P L+ A L + C +S I A+ ++ ++ C YS LI A +
Sbjct: 98 PAP-LWHAFLKSLCASSSSSSSIALAYAVVSWLQKHNLCFSYELLYSILINALGRS---- 152
Query: 233 LIETLYQD--MDERSV-TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM 289
E LY+ + +R V TP +T N ++G + G ++ ++S M +PD
Sbjct: 153 --EKLYEAFLLSQRQVLTP--LTYNALIGACARNGDVEKALNLMSKMRRDGY-QPDFVNY 207
Query: 290 NTILSVFANKGQVD--MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
++I+ ++D ++++ Y + I+ + N +I + K + +
Sbjct: 208 SSIIQYLTRSNKIDSPILQKLYAEIETDKIEIDGHLMNDIIVGFSKAGDPTRAMRFLAMA 267
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
+ ST VI A + G E FE++ G++ T+ + L+ GY G
Sbjct: 268 QSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSL 327
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
V K + + Y+ +I A V K M+ + +P+S FS +
Sbjct: 328 KDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRI 387
Query: 468 TEAYAKEG 475
Y +G
Sbjct: 388 LANYRDKG 395
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 174/362 (48%), Gaps = 5/362 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
++ QA+++F+ + + +P TY ++ L K G+ A + +M E G +P Y
Sbjct: 183 KFAQAMELFDDMVARG-CRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTY 241
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
+ ++ ++ ++ ++EA + MK + PD++TY++LI+ + +++ L +M
Sbjct: 242 STIIDSHRKDRRVNEALDIFSYMK-VKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMR 300
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
++ P+ VT N+++ K G + + VL M E +PDV T ++++ ++ + +V
Sbjct: 301 SLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGV-EPDVVTYSSLMYGYSLRSEV 359
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ ++ G P+ ++NILI Y K + D+ + M + +YN +
Sbjct: 360 VEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTL 419
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I +G + F+ MH G + T+ L++G+ G F K R
Sbjct: 420 IHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYS 479
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
N+ YN +I A K+ +L + +++ + K +P+++ ++ + KEG+ D+ A
Sbjct: 480 KPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDE--A 537
Query: 483 LE 484
LE
Sbjct: 538 LE 539
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 144/330 (43%), Gaps = 16/330 (4%)
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
+LA V ++++ G++PT +T L+ C+ +A + M C+PDVYTY+T
Sbjct: 150 DLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDM-VARGCRPDVYTYTT 208
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
+I L + M+E PN VT + ++ + K ++ + S M +
Sbjct: 209 IINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYM-KVK 267
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
PD++T N+++ N Q + R+ I P+ TFN+L+ K+ +
Sbjct: 268 GISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEA 327
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
V++ M ++ TY++++ +S + F+ M +G K D ++ LING
Sbjct: 328 QGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILING 387
Query: 401 YANAG-------LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
Y LF+++I + N YN +I + L E ++K M
Sbjct: 388 YCKVKRIDEAKQLFNEMIHQ-------GLTPNNVSYNTLIHGLCQLGSLREARNLFKNMH 440
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
P+ T+SI+ + + K+G K + L
Sbjct: 441 TNGNLPNLFTYSILLDGFCKQGYFGKAFRL 470
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 137/323 (42%), Gaps = 1/323 (0%)
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
FN M+ P +T LL+A + + ++L + L P++YT S LI
Sbjct: 85 FNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFS 144
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
R +L ++ + + + P VT ++ K G F Q + M+ C+PDV
Sbjct: 145 HLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARG-CRPDV 203
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
+T TI++ G+ +K G P T++ +I ++ K R ++ + Y
Sbjct: 204 YTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSY 263
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M+ TYN++I+ + K +M + + D TF L++ G
Sbjct: 264 MKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGK 323
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ ++ +++ + +V Y++++ +++E +++ M K C+PD +++I
Sbjct: 324 VSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNI 383
Query: 467 MTEAYAKEGMNDKVYALEQEKLQ 489
+ Y K D+ L E +
Sbjct: 384 LINGYCKVKRIDEAKQLFNEMIH 406
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 159/372 (42%), Gaps = 8/372 (2%)
Query: 94 LKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVL 153
L KK+E +A + V T + H ++ +AL +F +K + P TY L+
Sbjct: 225 LLKKME-EAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGI-SPDIFTYNSLIQG 282
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L Q + A + NEM I P + L+ C+ + EA L M + +P
Sbjct: 283 LCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEM-GVEP 341
Query: 214 DVYTYSTLIKACVDAMRFELIET--LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
DV TYS+L+ ++R E++E L+ M + P+ + NI++ GY K D+ ++
Sbjct: 342 DVVTYSSLMYG--YSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQ 399
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+ + M+ P+ + NT++ G + ++ G P T++IL+ +
Sbjct: 400 LFNEMIHQGL-TPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGF 458
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
K+ + K + M+ YN +I+A G+ + F ++ +G++ +
Sbjct: 459 CKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNA 518
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
+ + +ING GL + + + R + + YN +I + D ++
Sbjct: 519 QIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGE 578
Query: 452 MKEKHCRPDSET 463
M++K D T
Sbjct: 579 MRDKGFIADVGT 590
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 98/252 (38%), Gaps = 3/252 (1%)
Query: 227 DAMRFELIETL---YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK 283
DA F I+ + M R P + +L K G + L+ +E A
Sbjct: 71 DACSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLS 130
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P+++T++ +++ F++ +VD+ K G+ P TF LI K + + +
Sbjct: 131 PNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMEL 190
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ M TY +I +G+ ++M G + + T+ +I+ +
Sbjct: 191 FDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRK 250
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
++ + I+ ++ YN++I E + M+ + PD T
Sbjct: 251 DRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVT 310
Query: 464 FSIMTEAYAKEG 475
F+++ + KEG
Sbjct: 311 FNVLVDTICKEG 322
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 164/349 (46%), Gaps = 5/349 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY LL + KS A +V +EM +G P Y ++ CR +D+A
Sbjct: 177 QPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARE 236
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
LN++ + QPD +Y+T++K A R+E +E L+ +M E++ PN VT ++++ +
Sbjct: 237 FLNRLSSY-GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 295
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ GM ++ +VL M C + N +++ +G+VD ++ ++G P+
Sbjct: 296 CRGGMVERAIQVLEQM-SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 354
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T ++ ++ + ++ +++ M + P T+N I G + E
Sbjct: 355 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIE 414
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
QM G + + T+ L+NG+ G +V S++ L + N Y +++ A+
Sbjct: 415 QMSEHGCEVNIVTYNALVNGFCVQG---RVDSALELFYSMPCKPNTITYTTLLTGLCNAE 471
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
L + M +K C P+ TF+++ + ++G+ D+ L ++ ++
Sbjct: 472 RLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMME 520
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 138/339 (40%), Gaps = 7/339 (2%)
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
KL+ L + G+ A +V G Y L+A YCR +D A + M
Sbjct: 83 KLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPV- 141
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
PD YTY+ +I+ D R +L DM R P+ VT ++L K+ F Q
Sbjct: 142 ---APDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQ 198
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF-NIL 327
VL M + C P++ T N I++ +G+VD + + ++G P+T ++ +L
Sbjct: 199 AMEVLDEM-RAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVL 257
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
G KR D E M K P T++ ++ F G + EQM G
Sbjct: 258 KGLCAAKRWEDVEELFAEMMEKNCMP-NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGC 316
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
A+T +IN G + + + Y V+ +A+ + +
Sbjct: 317 AANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKE 376
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ K M K+C P+ TF+ ++G+ ++ L ++
Sbjct: 377 LLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQ 415
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 122/274 (44%), Gaps = 7/274 (2%)
Query: 132 EMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
E+LKE + P E T+ + +L + G E A + +M E G E Y AL+ +
Sbjct: 376 ELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGF 435
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
C +D A L ++P C+P+ TY+TL+ +A R + L +M ++ PN
Sbjct: 436 CVQGRVDSA---LELFYSMP-CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPN 491
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
VT N+++ + + G+ D+ ++ M+E C P++ T NT+L +
Sbjct: 492 VVTFNVLVSFFCQKGLMDEAIELVEQMMEHG-CTPNLITYNTLLDGITKDCNSEEALELL 550
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
+ G+ P+ T++ +IG ++ ++ + ++ L + YN ++ A
Sbjct: 551 HGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKR 610
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ F M + G + T+ LI G AN
Sbjct: 611 CNTDGAIDFFAYMVSNGCMPNELTYITLIEGLAN 644
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/400 (19%), Positives = 148/400 (37%), Gaps = 65/400 (16%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+QP +Y +L L + + E ++F EM+E+ P + L+ +CR +++ A
Sbjct: 246 FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAI 305
Query: 200 VTLNQMK--------TLPN--------------------------CQPDVYTYSTLIKAC 225
L QM TL N C PD +Y+T++K
Sbjct: 306 QVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 365
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE------- 278
A R+E + L ++M ++ PN VT N + + G+ +Q ++ M E
Sbjct: 366 CRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNI 425
Query: 279 ------------------------SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRN 314
S CKP+ T T+L+ N ++D +
Sbjct: 426 VTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 485
Query: 315 FGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKH 374
P TFN+L+ + +K + D+ ++E M + TYN +++ + +++
Sbjct: 486 KDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEE 545
Query: 375 MEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVIS 434
+ + G+ D T+ +I + + I + L + YN ++
Sbjct: 546 ALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILL 605
Query: 435 ACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
A K + + M C P+ T+ + E A E
Sbjct: 606 ALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANE 645
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 84/226 (37%), Gaps = 53/226 (23%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY LL L + + + A ++ EM+++ P + L++ +C+ L+DEA
Sbjct: 454 KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIE 513
Query: 201 TLNQM---KTLPN--------------CQ-----------------PDVYTYSTLIKACV 226
+ QM PN C PD+ TYS++I
Sbjct: 514 LVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLS 573
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
R E ++ + + + P V N +L K D + M+ S C P+
Sbjct: 574 REDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMV-SNGCMPNE 632
Query: 287 WTMNTILSVFAN----------------KGQV--DMMERWYEKFRN 314
T T++ AN +G + +++E W KF N
Sbjct: 633 LTYITLIEGLANEDFLKETRDLLRELCSRGVLNKNLLEEWRPKFSN 678
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 151/311 (48%), Gaps = 4/311 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSG-QPELARKVFNEMVEEGIEPTPELYTA 184
+A+ VF +KE +P TY ++ GK G + + K F+EM G++P + +
Sbjct: 286 EAISVFNSMKEYGL-RPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNS 344
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
LLA R L + A ++M T + DV++Y+TL+ A + +L + M +
Sbjct: 345 LLAVCSRGGLWEAARNLFDEM-TNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVK 403
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ PN V+ + V+ G+ KAG FD+ + G + D + NT+LS++ G+ +
Sbjct: 404 RIMPNVVSYSTVIDGFAKAGRFDEALNLF-GEMRYLGIALDRVSYNTLLSIYTKVGRSEE 462
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ + GI + T+N L+G YGK+ YD++ V M++ TY+ +I+
Sbjct: 463 ALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLID 522
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
+S G K F + + G++AD + LI+ GL +S + +K I+
Sbjct: 523 GYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISP 582
Query: 425 NVSFYNAVISA 435
NV YN++I A
Sbjct: 583 NVVTYNSIIDA 593
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 153/338 (45%), Gaps = 3/338 (0%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
++ LG+ G+ +A+++F G T ++AL++AY R+ L +EA N MK
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEY- 297
Query: 210 NCQPDVYTYSTLIKACV-DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
+P++ TY+ +I AC M F+ + + +M V P+ +T N +L + G+++
Sbjct: 298 GLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
+ M + + DV++ NT+L GQ+D+ + I P +++ +I
Sbjct: 358 ARNLFDEM-TNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
+ K +D+ ++ MR L +YN ++ ++ +G ++ +M + G+K
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
D T+ L+ GY G + +V + + N+ Y+ +I K E +
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
++ K R D +S + +A K G+ +L E
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDE 574
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 90/198 (45%), Gaps = 1/198 (0%)
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
+ ++S G+V + +R +E G F+ LI AYG+ ++++ SV M++
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 350 LQFPWTSSTYNNVIEAFSDMG-DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
TYN VI+A G + K + F++M G++ D TF L+ + GL+
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ + +I ++V YN ++ A K + + +M K P+ ++S +
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 469 EAYAKEGMNDKVYALEQE 486
+ +AK G D+ L E
Sbjct: 417 DGFAKAGRFDEALNLFGE 434
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 183/411 (44%), Gaps = 15/411 (3%)
Query: 81 IPGYRSKRTPIKNLKKKLERKAKAKAWV--NTVAETFSDHVLKKQWFQALQVFEMLKEQP 138
I GY K I N L+R + + V NT+ + D + QA++V + + ++
Sbjct: 179 ISGY-CKAGEINNALSVLDRMSVSPDVVTYNTILRSLCD---SGKLKQAMEVLDRMLQRD 234
Query: 139 FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA 198
Y P TY L+ + A K+ +EM + G P Y L+ C+ +DEA
Sbjct: 235 CY-PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 199 FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
LN M + CQP+V T++ ++++ R+ E L DM + +P+ VT NI++
Sbjct: 294 IKFLNDMPS-SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN 352
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
+ G+ + +L M + C+P+ + N +L F + ++D + E+ + G
Sbjct: 353 FLCRKGLLGRAIDILEKMPQHG-CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS---TYNNVIEAFSDMGDAKHM 375
P+ T+N ++ A K K+ +E + +L S TYN VI+ + G
Sbjct: 412 PDIVTYNTMLTALCKD---GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
++M A+ +K DT T+ L+ G + G + I ++ I N +N+++
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLG 528
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
K+ M + C+P+ +++I+ E A EGM + L E
Sbjct: 529 LCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNE 579
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 126/267 (47%), Gaps = 7/267 (2%)
Query: 123 QWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
+W A ++ +ML++ + P T+ L+ L + G A + +M + G +P
Sbjct: 324 RWMDAEKLLADMLRKG--FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQD 240
Y LL +C+ +D A L +M + C PD+ TY+T++ A C D + +E L Q
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVS-RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ- 439
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
+ + +P +T N V+ G KAG + ++L M + KPD T ++++ + +G
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM-RAKDLKPDTITYSSLVGGLSREG 498
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+VD +++ +F GI P TFN ++ K R D+ + +M ++Y
Sbjct: 499 KVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYT 558
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGM 387
+IE + G AK ++ +G+
Sbjct: 559 ILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/329 (19%), Positives = 137/329 (41%), Gaps = 5/329 (1%)
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
G+ A K+ + G P Y +++ YC+ I+ A L++M PDV T
Sbjct: 151 GKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV----SPDVVT 206
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y+T++++ D+ + + + M +R P+ +T I++ + ++L M
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR 266
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
+ C PDV T N +++ +G++D ++ + G P T NI++ + +
Sbjct: 267 DRG-CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
++ M + F + T+N +I G E+M G + ++ ++ L
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPL 385
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
++G+ + I + ++ YN +++A K + + + ++ K C
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Query: 458 RPDSETFSIMTEAYAKEGMNDKVYALEQE 486
P T++ + + AK G K L E
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDE 474
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 123/331 (37%), Gaps = 41/331 (12%)
Query: 191 RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT 250
R ++E F L M N PD+ +TLI+ + + + ++ P+
Sbjct: 114 RTGELEEGFKFLENMVYHGNV-PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDV 172
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD------- 303
+T N+++ GY KAG + VL M + PDV T NTIL + G++
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRM----SVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 304 -MMER---------------------------WYEKFRNFGIDPETRTFNILIGAYGKKR 335
M++R ++ R+ G P+ T+N+L+ K+
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
D+ + M T+N ++ + G E M +G TF
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
LIN GL + I + + N YN ++ K + +RM +
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 456 HCRPDSETFSIMTEAYAKEG-MNDKVYALEQ 485
C PD T++ M A K+G + D V L Q
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 172/362 (47%), Gaps = 5/362 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
++ QA+++F+ + + QP + TY ++ L K G+ LA +F +M E G + Y
Sbjct: 60 KFAQAVELFDDMVARG-CQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTY 118
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
+ L+ + C+ ++EA + MK + P ++TY++LI+ + R++ L +M
Sbjct: 119 STLIHSLCKYRRVNEALDIFSYMKA-KDISPTIFTYTSLIQGLCNFSRWKEASALLNEMT 177
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
++ PN VT N+++ + K G E VL M E +PDV T N+++ ++ +V
Sbjct: 178 SLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGV-EPDVVTYNSLMYGYSMWTEV 236
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ ++ G P+ +++ILI Y K + D+ + M + +YN +
Sbjct: 237 VEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTL 296
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I +G + + F+ MH G + T+ L++G+ G K R +
Sbjct: 297 IHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYL 356
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
N+ YN +++A K+ +L + ++ + +P+ + ++ + KEG+ D+ A
Sbjct: 357 KPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDE--A 414
Query: 483 LE 484
LE
Sbjct: 415 LE 416
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 159/374 (42%), Gaps = 12/374 (3%)
Query: 94 LKKKLERKAKAKAWVNTVAETFSDHVLKK--QWFQALQVFEMLKEQPFYQPKEGTYMKLL 151
L KK+E +A +N V + H L K + +AL +F +K + P TY L+
Sbjct: 102 LFKKME---EAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDI-SPTIFTYTSLI 157
Query: 152 VLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNC 211
L + + A + NEM I P + L+ +C+ + A L M +
Sbjct: 158 QGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEM-GV 216
Query: 212 QPDVYTYSTLIKACVDAMRFELIET--LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+PDV TY++L+ +M E++E L+ M + P+ + +I++ GY KA D+
Sbjct: 217 EPDVVTYNSLMYG--YSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEA 274
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+++ + M+ + P+ + NT++ G++ + ++ G P T+ IL+
Sbjct: 275 KQLFNEMIHQGS-TPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLD 333
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+ K+ K + M+ YN ++ A G+ K F ++ G++
Sbjct: 334 GFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQP 393
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
+ + + +ING GL + + + R + YN +I ++ D +
Sbjct: 394 NVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLI 453
Query: 450 KRMKEKHCRPDSET 463
M+++ D+ T
Sbjct: 454 GEMRDRGFITDAGT 467
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 118/282 (41%), Gaps = 1/282 (0%)
Query: 208 LPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFD 267
L P+ T + LI R +L ++ + + P VT ++ G GK G F
Sbjct: 3 LAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFA 62
Query: 268 QMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
Q + M+ C+PD +T TI++ G+ + ++K G T++ L
Sbjct: 63 QAVELFDDMVARG-CQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTL 121
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
I + K R ++ + YM+ T TY ++I+ + K +M + +
Sbjct: 122 IHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNI 181
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
+ TF L++ + G ++ +++ + +V YN+++ +++E +
Sbjct: 182 MPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARK 241
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
++ M K C+PD ++SI+ Y K D+ L E +
Sbjct: 242 LFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIH 283
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 80/208 (38%), Gaps = 3/208 (1%)
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
+E A P+ T+N +++ F +VD+ K G+ P TF LI GK
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
+ + + + M TY +I +G+ F++M G + + T+
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
LI+ ++ + I+ + Y ++I E + M +
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180
Query: 457 CRPDSETFSIMTEAYAKEGMNDKVYALE 484
P+ TF+++ + + KEG KV A E
Sbjct: 181 IMPNVVTFNVLVDTFCKEG---KVLAAE 205
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 153/351 (43%), Gaps = 8/351 (2%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+ PK Y L+ K G A+ +FNE+ + G+ PT + L+ C++ +DE F
Sbjct: 219 FPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGF 278
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
M+ PDV+TYS LI R ++ E L+ +M +R + PN +T ++ G
Sbjct: 279 RLKKTMEE-NRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDG 337
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
++ D ML KPD+ NT+L+ G V+ + ++ + G+ P
Sbjct: 338 QYRSRRMDSAMNTYHQMLTMGV-KPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKP 396
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ T+ LI Y K+ + + + M + + + +I F G + E T
Sbjct: 397 DKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTL 456
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI---AENVSFYNAVISAC 436
+M GMK D T+ +I+GY G V +L ++QI V YN +++
Sbjct: 457 REMVEAGMKPDDATYTMVIDGYCKKG---NVKMGFKLLKEMQINGHKPGVITYNVLMNGL 513
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEK 487
K + + + M PD T++I+ E + K G + + L EK
Sbjct: 514 CKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEK 564
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 161/373 (43%), Gaps = 47/373 (12%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A+Q F +++ F P G LL + S P ++E++E G P + Y L+
Sbjct: 172 AIQCFRLVRNSNFQIPFHGCGY-LLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILI 230
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+C+ I +A + N+++ +R +
Sbjct: 231 NKFCKEGSIRDAKLIFNEIR------------------------------------KRGL 254
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P TV+ N ++ G K+ D+ R L +E PDV+T + ++ +G++D+ E
Sbjct: 255 RPTTVSFNTLINGLCKSRNLDEGFR-LKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAE 313
Query: 307 RWYEKFRNFGIDPETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ +++ + G+ P TF LI G Y +RM M++ + M + YN ++
Sbjct: 314 QLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQ-MLTMGVKPDLVMYNTLLNG 372
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR-LASKLQIAE 424
+GD ++M GMK D T+ LI+GY G + + + + + +
Sbjct: 373 LCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLD 432
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
NV+F A+IS + + + ER + M E +PD T++++ + Y K+G + L
Sbjct: 433 NVAF-TALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLL 491
Query: 485 QEKLQMLLEASGH 497
+E ++ +GH
Sbjct: 492 KE-----MQINGH 499
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 128/275 (46%), Gaps = 6/275 (2%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A Q+F+ ++++ +P T+ L+ +S + + A +++M+ G++P +Y LL
Sbjct: 312 AEQLFDEMQQRGL-RPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLL 370
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
C+ +++A +++MK + +PD TY+TLI E + + M+E V
Sbjct: 371 NGLCKVGDVNKARKLVDEMKMV-GMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGV 429
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
+ V ++ G+ + G ER L M+E A KPD T ++ + KG V M
Sbjct: 430 VLDNVAFTALISGFCRDGRVRDAERTLREMVE-AGMKPDDATYTMVIDGYCKKGNVKMGF 488
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ ++ + G P T+N+L+ K+ + ++E M L TYN ++E
Sbjct: 489 KLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGH 548
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
G A+ + + + +G+ D + L++ Y
Sbjct: 549 CKNGKAEDL---LKLRNEKGLIVDYAYYTSLVSEY 580
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 171/375 (45%), Gaps = 2/375 (0%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
N VA ++ + A + F +Q Y K Y+ L+ +L S + R +F
Sbjct: 120 NFVAFVLKSDAIRGKPDIAFRFFWWAGKQKNYIHKIECYVSLIDVLSLSSDFDRVRCIFG 179
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
E E+G T +L+ ++ +++E +MK +P +YT++ L+ V++
Sbjct: 180 EFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKE-SGIEPSLYTFNFLLNGLVNS 238
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
M E E +++ M+ + P+ V+ N ++ GY KAG + + M E +PD T
Sbjct: 239 MFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDM-EKRNLEPDKIT 297
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
T++ ++G D Y++ G++ ++++IG K + SSV E M
Sbjct: 298 YLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMN 357
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
K + Y +I+A+ G+ FE+M EG + D T+ ++NG +G
Sbjct: 358 KKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLD 417
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ + ++A N FY+++I KA + E E+ ++ M E+ C DS ++ +
Sbjct: 418 EAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALI 477
Query: 469 EAYAKEGMNDKVYAL 483
+A AK G ++ L
Sbjct: 478 DALAKSGKMEEALVL 492
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 145/350 (41%), Gaps = 3/350 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+ L V+ +KE +P T+ LL L S E A +VF M I P Y +
Sbjct: 208 ELLWVWRRMKESGI-EPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTM 266
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ YC+ +A M+ N +PD TY TLI+AC F+ LYQ+M+ER
Sbjct: 267 IKGYCKAGNTKKAMEKFTDMEKR-NLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERG 325
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ ++V+GG K G + V M CK +V ++ + G V+
Sbjct: 326 LEIPPHAYSLVIGGLCKDGRTVEGSSVFENM-NKKGCKANVAIYTALIDAYGKNGNVNEA 384
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+E+ + G +P+ T+ +++ K D+ E+ + + + Y+++I+
Sbjct: 385 INLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDG 444
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
G E FE+M G D+ + LI+ A +G + + + K +
Sbjct: 445 LGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQT 504
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
V Y +IS K E +++ M +K P + +F ++ G
Sbjct: 505 VYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSG 554
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 88/209 (42%), Gaps = 5/209 (2%)
Query: 292 ILSVFANKGQVDMMER---WYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
+L A +G+ D+ R W K +N+ + + LI +D++ + +
Sbjct: 125 VLKSDAIRGKPDIAFRFFWWAGKQKNY--IHKIECYVSLIDVLSLSSDFDRVRCIFGEFK 182
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
+ F T N++I +F +G + + + + +M G++ TF L+NG N+
Sbjct: 183 EKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIE 242
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ +I +V YN +I KA + + + M++++ PD T+ +
Sbjct: 243 SAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLI 302
Query: 469 EAYAKEGMNDKVYALEQEKLQMLLEASGH 497
+A EG D L QE + LE H
Sbjct: 303 QACYSEGNFDSCLHLYQEMEERGLEIPPH 331
>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
Length = 597
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 202/453 (44%), Gaps = 19/453 (4%)
Query: 45 SVTSTNKHTSFSSESAVAAKKRLWK------EGEYPGVS---ETSIPGYRSKRTPIKNLK 95
V T S + A K R WK +G +P +S + + +++ T ++
Sbjct: 64 GVARTFDRKKISRKRGGAIKGRGWKYGSGFVDGVFPVLSPMAQDVLELVQTRGTDAASVW 123
Query: 96 KKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLG 155
+ L++ +A + + L +QW + V E + + ++P Y L+ G
Sbjct: 124 ESLDKIPQAHDLWDDIVNVAVQLRLNRQWEPIITVCEWVLRRSSFRPDIICYNLLIDAYG 183
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK--TLPNCQP 213
+ Q A + ++E PT + Y LL AYC + + A +++M+ +P P
Sbjct: 184 QKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISEMQRNGIP---P 240
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
Y+ + + A E +YQ M + NT T +++ YGKA RV
Sbjct: 241 TATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKANQPMSSLRVF 300
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
M +S CKP++ T +++ FA +G + E +E+ + G +P+ +N L+ AY +
Sbjct: 301 REM-KSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSR 359
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+ S + M + ++YN +++AF G + E F+++ +GM+ K+
Sbjct: 360 AGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKS 419
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
L++ +A +G + + K + + NA+++A +A L +MER++ M+
Sbjct: 420 HMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAME 479
Query: 454 EKH----CRPDSETFSIMTEAYAKEGMNDKVYA 482
PD+ T+++M AY + G D++ A
Sbjct: 480 RGDGAIAGAPDTSTYNVMVNAYGRAGYLDRMEA 512
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 169/375 (45%), Gaps = 35/375 (9%)
Query: 110 TVAETFSDHVLKKQWFQ-ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
TV + D +LK + + A++V++ +K++ E TY ++ + GK+ QP + +VF
Sbjct: 243 TVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTE-TYTLMINVYGKANQPMSSLRVFR 301
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
EM G +P YTAL+ A+ R L ++A +M+ + +PDVY Y+ L++A A
Sbjct: 302 EMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGH-EPDVYAYNALMEAYSRA 360
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
+ ++ M+ P+ + NI++ +G+AG+ + E + + +P + +
Sbjct: 361 GLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGM-RPTMKS 419
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
+LS A G V E + G+ P+T N ++ AYG+ D M + M
Sbjct: 420 HMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAME 479
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
+ GD A DT T+ ++N Y AG
Sbjct: 480 R--------------------GDG-----------AIAGAPDTSTYNVMVNAYGRAGYLD 508
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
++ ++ R + +A +V + + I A + + + RV++ M + C PD+ T ++
Sbjct: 509 RMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKVLL 568
Query: 469 EAYAKEGMNDKVYAL 483
A + E ++V A+
Sbjct: 569 AACSDERQVEQVKAI 583
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 148/323 (45%), Gaps = 9/323 (2%)
Query: 99 ERKAKAKAWVNTVAETFSDHVLKK--QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGK 156
+R K + NT T +V K Q +L+VF +K +P TY L+ +
Sbjct: 266 QRMKKERCRTNTETYTLMINVYGKANQPMSSLRVFREMKSVGC-KPNICTYTALVNAFAR 324
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
G E A +VF EM + G EP Y AL+ AY R L A + M+ + C+PD
Sbjct: 325 EGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHM-GCEPDRA 383
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
+Y+ L+ A A + E +Q++ ++ + P + ++L + ++G + E V++
Sbjct: 384 SYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMA-Q 442
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF-RNFGI---DPETRTFNILIGAYG 332
L + +PD + +N +L+ + G++D MER + R G P+T T+N+++ AYG
Sbjct: 443 LHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGAIAGAPDTSTYNVMVNAYG 502
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
+ D+M + + T+ + I A++ + FE+M G D
Sbjct: 503 RAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAG 562
Query: 393 TFCCLINGYANAGLFHKVISSVR 415
T L+ ++ +V + VR
Sbjct: 563 TAKVLLAACSDERQVEQVKAIVR 585
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 103/245 (42%), Gaps = 1/245 (0%)
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
S P+ + N+++ YG+ + E +LE A C P T +L + GQ+
Sbjct: 167 SFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLE-ARCVPTEDTYALLLRAYCGSGQLHR 225
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
E + + GI P +N + K R +K V + M+K + + TY +I
Sbjct: 226 AEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMIN 285
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
+ F +M + G K + T+ L+N +A GL K +
Sbjct: 286 VYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEP 345
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
+V YNA++ A +A ++ M+ C PD +++I+ +A+ + G++ + A
Sbjct: 346 DVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAF 405
Query: 485 QEKLQ 489
QE Q
Sbjct: 406 QELKQ 410
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 82/186 (44%), Gaps = 5/186 (2%)
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
R P+ +N+LI AYG+KR + + + + + T TY ++ A+ G
Sbjct: 163 LRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQ 222
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNA 431
E +M G+ + ++G A K + + K + N Y
Sbjct: 223 LHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTL 282
Query: 432 VISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQML 491
+I+ KA+ M RV++ MK C+P+ T++ + A+A+EG+ +K + +E
Sbjct: 283 MINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEE----- 337
Query: 492 LEASGH 497
++ +GH
Sbjct: 338 MQQAGH 343
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY ++ G++G + F + G+ +T+ + AY R +
Sbjct: 489 PDTSTYNVMVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRV 548
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVT 247
+M C PD T L+ AC D + E ++ + + M + + T
Sbjct: 549 FEEMVD-AGCYPDAGTAKVLLAACSDERQVEQVKAIVRSMHKDAKT 593
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 175/366 (47%), Gaps = 5/366 (1%)
Query: 123 QWFQALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
QW + ++ F+ M+ +Q + ++ LG+ G+ + A+ +F+ V G +
Sbjct: 99 QWEKVVKSFDWMVLQQNLRSQWDKVTSTIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFV 158
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y++L+ AY R+ + +A MK + C+P++ Y+ +I AC + ++++M
Sbjct: 159 YSSLICAYGRSGKLAKAVEIFEAMKVV--CKPNLVVYNAVIDACSKGGDYPTALRIFREM 216
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
E+ ++P+ +T N ++ G+A +++ +R+ + M E + DV T NT+++ + GQ
Sbjct: 217 LEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDV-TYNTLIATYCRGGQ 275
Query: 302 VDMMERWYEKF-RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+ + E ++ GI+P T++ +I Y K + + ++ + MR YN
Sbjct: 276 MHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYN 335
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+++ + +G+ M G D T+ L++ Y G F + +S + +
Sbjct: 336 TMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQR 395
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+ N+ Y+A+I A K + +++ +K+ +PD +S + + K G D+
Sbjct: 396 GASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEA 455
Query: 481 YALEQE 486
AL +E
Sbjct: 456 LALLEE 461
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 2/208 (0%)
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
+TI+S G+ D + +++ G ++ LI AYG+ K + E M+
Sbjct: 125 STIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKV 184
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
+ P YN VI+A S GD F +M +GM D TF LI+ A + +
Sbjct: 185 VCKP-NLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEE 243
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM-KEKHCRPDSETFSIMT 468
+ IA + YN +I+ + + + + M K P T+S M
Sbjct: 244 CDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMI 303
Query: 469 EAYAKEGMNDKVYALEQEKLQMLLEASG 496
+ YAK G+ + AL QE +E G
Sbjct: 304 DGYAKLGLAHEAIALFQEMRNQNVEPDG 331
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 117/255 (45%), Gaps = 34/255 (13%)
Query: 93 NLKKKLERKAKAKAWV--NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKL 150
++++ +E AK V N + +++ + ++ +A+ + E +K++ P TY L
Sbjct: 352 SIRRAMEEAGFAKDIVTYNALLDSYGK---QGKFREAMSLLEEMKQRG-ASPNILTYSAL 407
Query: 151 LVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPN 210
+ K G A +F ++ + G++P LY+ L+ C+N DEA L +M
Sbjct: 408 IDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMAD-NG 466
Query: 211 CQPDVYTYSTLIKA----CV------DAMRFELIETLYQ------DMDERSVTPNTVTQN 254
+P+V TY++L+ A C+ +RF L+ + D D++S+ Q
Sbjct: 467 IRPNVITYNSLLDAYGRQCLMVRKNFPKLRFFLLPRVTMLLKPSVDYDQQSLVDPKQKQA 526
Query: 255 IVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRN 314
+VL A +F +M + +G+ KP+V T ++IL+ ++ V+ E R
Sbjct: 527 LVLAA---ARVFREMAK--NGV------KPNVVTFSSILNACSHCASVEDASSLLEAMRV 575
Query: 315 FGIDPETRTFNILIG 329
F T +L+G
Sbjct: 576 FDGRVYGVTHGLLMG 590
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 175/366 (47%), Gaps = 5/366 (1%)
Query: 123 QWFQALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
QW + ++ F+ M+ +Q + ++ LG+ G+ + A+ +F+ V G +
Sbjct: 98 QWEKVVKSFDWMVLQQNLRSQWDKVTSTIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFV 157
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y++L+ AY R+ + +A MK + C+P++ Y+ +I AC + ++++M
Sbjct: 158 YSSLICAYGRSGKLAKAVEIFEAMKVV--CKPNLVVYNAVIDACSKGGDYPTALRIFREM 215
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
E+ ++P+ +T N ++ G+A +++ +R+ + M E + DV T NT+++ + GQ
Sbjct: 216 LEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDV-TYNTLIATYCRGGQ 274
Query: 302 VDMMERWYEKF-RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+ + E ++ GI+P T++ +I Y K + + ++ + MR YN
Sbjct: 275 MHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYN 334
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+++ + +G+ M G D T+ L++ Y G F + +S + +
Sbjct: 335 TMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQR 394
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+ N+ Y+A+I A K + +++ +K+ +PD +S + + K G D+
Sbjct: 395 GASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEA 454
Query: 481 YALEQE 486
AL +E
Sbjct: 455 LALLEE 460
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 2/208 (0%)
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
+TI+S G+ D + +++ G ++ LI AYG+ K + E M+
Sbjct: 124 STIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKV 183
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
+ P YN VI+A S GD F +M +GM D TF LI+ A + +
Sbjct: 184 VCKP-NLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEE 242
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM-KEKHCRPDSETFSIMT 468
+ IA + YN +I+ + + + + M K P T+S M
Sbjct: 243 CDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMI 302
Query: 469 EAYAKEGMNDKVYALEQEKLQMLLEASG 496
+ YAK G+ + AL QE +E G
Sbjct: 303 DGYAKLGLAHEAIALFQEMRNQNVEPDG 330
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 118/256 (46%), Gaps = 36/256 (14%)
Query: 93 NLKKKLERKAKAKAWV--NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKL 150
++++ +E AK V N + +++ + ++ +A+ + E +K++ P TY L
Sbjct: 351 SIRRAMEEAGFAKDIVTYNALLDSYGK---QGKFREAMSLLEEMKQRG-ASPNILTYSAL 406
Query: 151 LVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPN 210
+ K G A +F ++ + G++P LY+ L+ C+N DEA L +M
Sbjct: 407 IDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMAD-NG 465
Query: 211 CQPDVYTYSTLIKA----CV------DAMRFELIETL-------YQDMDERSVTPNTVTQ 253
+P+V TY++L+ A C+ +RF L+ + QD D++S+ Q
Sbjct: 466 IRPNVITYNSLLDAYGRQCLMVRKTFPKLRFFLLPRVTMLLKPSMQD-DQQSLVDPKQKQ 524
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
+VL A +F +M + +G+ KP+V T ++IL+ ++ V+ E R
Sbjct: 525 ALVLAA---ARVFREMAK--NGV------KPNVVTFSSILNACSHCASVEDASNLLEAMR 573
Query: 314 NFGIDPETRTFNILIG 329
F T +L+G
Sbjct: 574 VFDGRVYGVTHGLLMG 589
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 177/361 (49%), Gaps = 9/361 (2%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+A+++F EM++ ++P +Y ++ L K+G +A VF +M + G +P Y
Sbjct: 176 EAVELFNEMVRRG--HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNT 233
Query: 185 LLAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
++ + C++ L+++A L++M + +P P+V+TY+ ++ + L+++M
Sbjct: 234 IIDSLCKDRLVNDAMEFLSEMLDRGIP---PNVFTYNCMVHGFCILGQLNEATRLFKEMV 290
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
R V P+TVT I++ G K GM + V M E +P++ T N ++ + + +
Sbjct: 291 GRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGV-EPNISTYNALMDGYCLQRLM 349
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ ++ +E G P ++NILI + K R D+ S++ M + TY+ +
Sbjct: 350 NEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTL 409
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
++ G K F++M + G+ + T+ L++G+ G + + ++ + ++
Sbjct: 410 MQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKL 469
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
N+ + +I A L + ++ ++ RP T+++M + KEG++D+ Y
Sbjct: 470 EPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYD 529
Query: 483 L 483
L
Sbjct: 530 L 530
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 130/324 (40%), Gaps = 10/324 (3%)
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
F MV P+ + L ++ + NQM L +VY+ + LI
Sbjct: 76 FYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMD-LFGVTHNVYSLNVLINCLC 134
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
+ ++ M + + P T N ++ G G + + + M+ +P+V
Sbjct: 135 RLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGH-EPNV 193
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
+ NTI++ G M ++K G P+ T+N +I + K R+ + +
Sbjct: 194 ISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSE 253
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M P TYN ++ F +G F++M + DT T L++G G+
Sbjct: 254 MLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGM 313
Query: 407 FHKVISSVRLA----SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
+S RL ++ + N+S YNA++ + E ++V++ M + C P
Sbjct: 314 ----VSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVH 369
Query: 463 TFSIMTEAYAKEGMNDKVYALEQE 486
+++I+ + K D+ +L E
Sbjct: 370 SYNILINGFCKSRRMDEAKSLLAE 393
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 140/318 (44%), Gaps = 4/318 (1%)
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
GQ A ++F EMV + P T L+ C+ ++ EA + M T +P++ T
Sbjct: 277 GQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETM-TEKGVEPNIST 335
Query: 218 YSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
Y+ L+ C+ + E + +++ M + P + NI++ G+ K+ D+ + +L+ M
Sbjct: 336 YNALMDGYCLQRLMNE-AKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEM 394
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
A PD T +T++ G+ +++ ++G+ P T++IL+ + K
Sbjct: 395 YHKAL-NPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGH 453
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
D+ +++ M++ + + +IE G + + F ++ A+G++ +T+
Sbjct: 454 LDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTV 513
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
+I G GL + R N YN +I ++ D R+ M K
Sbjct: 514 MIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKR 573
Query: 457 CRPDSETFSIMTEAYAKE 474
+ TF ++ + +++
Sbjct: 574 FSANLSTFQMLLDLESQD 591
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL++ + ++E+ +P + L+ + +G+ E+A+++F+++ +GI PT YT +
Sbjct: 456 EALKLLKSMQEKKL-EPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVM 514
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
+ + L DEA+ +M+ P+ +Y+ +I+
Sbjct: 515 IKGLLKEGLSDEAYDLFRKMED-DGFLPNSCSYNVMIQG 552
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 161/343 (46%), Gaps = 2/343 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY ++ L K G +LA + N+M IE ++ ++ + C+ +D+A
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 281
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M+T +P+V TYS+LI R+ L DM E+ + PN VT N ++ +
Sbjct: 282 LFKEMET-KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 340
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G F + E++ M++ + PD++T N++++ F ++D ++ +E + P+
Sbjct: 341 VKEGKFVEAEKLYDDMIKRSI-DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 399
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+N LI + K + + + + M + TY +I+ GD + + F+
Sbjct: 400 VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 459
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
QM ++G+ D T+ L++G N G K + K +I ++ Y +I KA
Sbjct: 460 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 519
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ + ++ + K +P+ T++ M + + + YAL
Sbjct: 520 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 562
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 138/333 (41%), Gaps = 2/333 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ + Q LA + +M++ G EP+ ++LL YC I +A ++QM
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ +PD T++TLI + L M +R PN VT +V+ G K G
Sbjct: 182 VEM-GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D +L+ M E+A + DV NTI+ VD +++ GI P T++
Sbjct: 241 TDLALNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
LI + S ++ M + + T+N +I+AF G E ++ M
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
+ D T+ L+NG+ K +V YN +I K+ + +
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+++ M + D+ T++ + + +G D
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 452
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 136/347 (39%), Gaps = 39/347 (11%)
Query: 133 MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRN 192
M+K +P P + KLL + K + ++ + +M I Y L+ +CR
Sbjct: 76 MVKSRPL--PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRR 133
Query: 193 SLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVT 252
S I A L +M L +P + T S+L+ R L M E P+T+T
Sbjct: 134 SQISLALALLGKMMKLGY-EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTIT 192
Query: 253 QNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF 312
++ G + ++ M++ C+P++ T +++ +G D+ K
Sbjct: 193 FTTLIHGLFLHNKASEAVALVDRMVQRG-CQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 251
Query: 313 RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
I+ + FN +I + K R D DA
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVD--------------------------------DA 279
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAV 432
++ F++M +G++ + T+ LI+ + G + + + +I N+ +NA+
Sbjct: 280 LNL---FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
I A +K +E E++Y M ++ PD T++ + + DK
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/258 (17%), Positives = 103/258 (39%), Gaps = 1/258 (0%)
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y +++ + M+ + L+ M + P+ V N +L K FD + L +
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVIS-LGEKM 111
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
+ ++T N +++ F + Q+ + K G +P T + L+ Y +
Sbjct: 112 QRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
++++ M ++ + + T+ +I A ++M G + + T+ +
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
+NG G ++ + +I +V +N +I + K + + ++K M+ K
Sbjct: 232 VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 291
Query: 458 RPDSETFSIMTEAYAKEG 475
RP+ T+S + G
Sbjct: 292 RPNVVTYSSLISCLCSYG 309
>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Brachypodium distachyon]
Length = 968
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 155/336 (46%), Gaps = 8/336 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E TY L+ + LA +FNEM+ +G++P+ YT L+ YCRN IDEA
Sbjct: 327 PDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRV 386
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L +M+ + +P TYS ++ V ++Y +M++ +P+ T +L G
Sbjct: 387 LYEMQ-VAGVKPSEVTYSAMLNGSVHEAF-----SVYDNMEKYGCSPDVYTYRNLLRGLC 440
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G Q + +S ++ + D T+N +L N G +D EK P+
Sbjct: 441 KGGHLVQAKEFMSCIVHIPS-AIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDI 499
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+ IL+ + +K +++ M + TY +++ G K Y F++
Sbjct: 500 HTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQE 559
Query: 382 MHA-EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+ EGM AD + ++NGY AG HKV ++ ++ ++ N + YN ++ IK
Sbjct: 560 IICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKG 619
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
L +YK M K +P + T+ ++ +K GM
Sbjct: 620 HLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGM 655
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 170/428 (39%), Gaps = 50/428 (11%)
Query: 108 VNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
++T S K + A+ + +M+ E+ P TY LL L K GQ + A +F
Sbjct: 499 IHTYTILLSGFCRKGKIVPAVILLQMMLEKGLV-PDIVTYTCLLKGLIKEGQVKAASYLF 557
Query: 168 NEMV-EEGIEPTPELYTALLAAYCRNSLIDEAFVTL---NQMKTLPNCQPDVYTYSTLIK 223
E++ +EG+ Y +++ Y + + + +T+ NQ K PN P +Y+ L+
Sbjct: 558 QEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPN--PA--SYNILMH 613
Query: 224 ACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK 283
+ LY+DM + + P VT +++ G K GM + + L M+
Sbjct: 614 GHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGI-Y 672
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
PD + + +++ F+ K ++ + + + + P ++T++ +I +K V
Sbjct: 673 PDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDV 732
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ M + + Y +I A GD E+M A G+ ++ G +
Sbjct: 733 LRDMVESGLEPKHTHYIALINAKCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSK 792
Query: 404 AG--------------------------LFHKVISSVRLASKLQIAE---------NVSF 428
G L H + +++ L + +V
Sbjct: 793 CGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVT 852
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
YN +I+ K + + +Y+ MK K RP+ T++ +TEA G LE EKL
Sbjct: 853 YNVLITGLCKIQCVSDALELYEEMKSKGLRPNVTTYTTLTEAIYGTG-----RTLEGEKL 907
Query: 489 QMLLEASG 496
+E G
Sbjct: 908 LNDIEDRG 915
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 176/433 (40%), Gaps = 16/433 (3%)
Query: 60 AVAAKKRLWKEGEYPGVSE--TSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSD 117
A+ + ++G P ++ T I GY T + L+ E + A V T+S
Sbjct: 348 AIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQV---AGVKPSEVTYSA 404
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
+L +A V++ + E+ P TY LL L K G A++ + +V
Sbjct: 405 -MLNGSVHEAFSVYDNM-EKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAI 462
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
+ ALL C + +DEA +M T+ N PD++TY+ L+ + L
Sbjct: 463 DQKTLNALLLGICNHGSLDEALDLCEKMVTI-NFIPDIHTYTILLSGFCRKGKIVPAVIL 521
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK----PDVWTMNTIL 293
Q M E+ + P+ VT +L G K G + S + + CK D N+++
Sbjct: 522 LQMMLEKGLVPDIVTYTCLLKGLIKEGQV----KAASYLFQEIICKEGMYADCIAYNSMM 577
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
+ + G++ +E + P ++NIL+ + KK + + + M +
Sbjct: 578 NGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIK 637
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
T+ TY +I S G + ++M EG+ D +F LIN ++ +
Sbjct: 638 PTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQL 697
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
L ++ + Y+A+I+ I+ + L V + M E P + + A +
Sbjct: 698 FNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCR 757
Query: 474 EGMNDKVYALEQE 486
G + + L++E
Sbjct: 758 FGDINGAFRLKEE 770
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 128/305 (41%), Gaps = 18/305 (5%)
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNC--QPDVYTYSTLIKACVDAMRFEL 233
+ P ++ L+ AY + + +A + + M NC + + + ++ A V+ +
Sbjct: 152 DSNPLVFDLLVNAYVKEKRVVDASMAILFMD---NCGFKASAHACNAVLNALVEIGESKH 208
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
+ ++ R + T NIVL G + ++ M + P+V T NTIL
Sbjct: 209 VWFFLKEGLVRKFPLDVTTCNIVLNSMCIEGNLKGAKHMIHKMKSCSL--PNVITYNTIL 266
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
+ KG+ E G++ + T+NI+I K + +++ MR
Sbjct: 267 HWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLA 326
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
TYN +I+ F D + F +M +G+K T+ LI+GY G + +
Sbjct: 327 PDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNG---TIDEA 383
Query: 414 VRLASKLQIA---ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
+R+ ++Q+A + Y+A+++ + E VY M++ C PD T+ +
Sbjct: 384 LRVLYEMQVAGVKPSEVTYSAMLNGSVH-----EAFSVYDNMEKYGCSPDVYTYRNLLRG 438
Query: 471 YAKEG 475
K G
Sbjct: 439 LCKGG 443
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 161/343 (46%), Gaps = 2/343 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY ++ L K G +LA + N+M IE ++ ++ + C+ +D+A
Sbjct: 184 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 243
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M+T +P+V TYS+LI R+ L DM E+ + PN VT N ++ +
Sbjct: 244 LFKEMET-KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 302
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G F + E++ M++ + PD++T N++++ F ++D ++ +E + P+
Sbjct: 303 VKEGKFVEAEKLYDDMIKRSI-DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 361
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+N LI + K + + + + M + TY +I+ GD + + F+
Sbjct: 362 VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 421
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
QM ++G+ D T+ L++G N G K + K +I ++ Y +I KA
Sbjct: 422 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 481
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ + ++ + K +P+ T++ M + + + YAL
Sbjct: 482 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 524
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 138/333 (41%), Gaps = 2/333 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ + Q LA + +M++ G EP+ ++LL YC I +A ++QM
Sbjct: 84 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 143
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ +PD T++TLI + L M +R PN VT +V+ G K G
Sbjct: 144 VEMGY-RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 202
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D +L+ M E+A + DV NTI+ VD +++ GI P T++
Sbjct: 203 TDLALNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 261
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
LI + S ++ M + + T+N +I+AF G E ++ M
Sbjct: 262 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 321
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
+ D T+ L+NG+ K +V YN +I K+ + +
Sbjct: 322 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 381
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+++ M + D+ T++ + + +G D
Sbjct: 382 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 414
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 136/347 (39%), Gaps = 39/347 (11%)
Query: 133 MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRN 192
M+K +P P + KLL + K + ++ + +M I Y L+ +CR
Sbjct: 38 MVKSRPL--PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRR 95
Query: 193 SLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVT 252
S I A L +M L +P + T S+L+ R L M E P+T+T
Sbjct: 96 SQISLALALLGKMMKLGY-EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTIT 154
Query: 253 QNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF 312
++ G + ++ M++ C+P++ T +++ +G D+ K
Sbjct: 155 FTTLIHGLFLHNKASEAVALVDRMVQRG-CQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 213
Query: 313 RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
I+ + FN +I + K R D DA
Sbjct: 214 EAAKIEADVVIFNTIIDSLCKYRHVD--------------------------------DA 241
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAV 432
++ F++M +G++ + T+ LI+ + G + + + +I N+ +NA+
Sbjct: 242 LNL---FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 298
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
I A +K +E E++Y M ++ PD T++ + + DK
Sbjct: 299 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 345
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/258 (17%), Positives = 103/258 (39%), Gaps = 1/258 (0%)
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y +++ + M+ + L+ M + P+ V N +L K FD + L +
Sbjct: 15 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVIS-LGEKM 73
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
+ ++T N +++ F + Q+ + K G +P T + L+ Y +
Sbjct: 74 QRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 133
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
++++ M ++ + + T+ +I A ++M G + + T+ +
Sbjct: 134 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 193
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
+NG G ++ + +I +V +N +I + K + + ++K M+ K
Sbjct: 194 VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 253
Query: 458 RPDSETFSIMTEAYAKEG 475
RP+ T+S + G
Sbjct: 254 RPNVVTYSSLISCLCSYG 271
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 209/456 (45%), Gaps = 30/456 (6%)
Query: 49 TNKHTSFSSESAVAAKKRLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWV 108
+++H E+AVA+++R K+ +++ ++ + R +K L K+ K +V
Sbjct: 90 SSEHQKTKDETAVASRRRRVKK-----MNKVALIKAKDWRERVKFLTDKI-LSLKPNQFV 143
Query: 109 NTVAE------TFSDH------VLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGK 156
+ + T +D+ V ++ W +AL+VFE L + ++ P +L +LG+
Sbjct: 144 ADILDARPVQMTPTDYCFVVKSVGQESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGR 203
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
Q LA ++F E + ++Y A++ Y R+ +A L+ M+ C PD+
Sbjct: 204 WNQESLAVEIFTR-AEPTVGDRVQVYNAMMGVYSRSGKFSKAQELLDAMRQ-RGCVPDLI 261
Query: 217 TYSTLIKACVDA--MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
+++TLI A + + + L+ L + + P+ +T N +L + + +V
Sbjct: 262 SFNTLINARLKSGGLTPNLVVELLDMVRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFE 321
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
M E+ C+PD+WT N ++SV+ G ER + + G P+ T+N L+ A+ ++
Sbjct: 322 DM-EAHRCQPDLWTYNAMISVYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAFARE 380
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA-EGMKADTKT 393
R +K+ V + M+K+ F TYN +I + G ++ M G D T
Sbjct: 381 RNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAIT 440
Query: 394 FCCLINGYANAGLFHKVISSVRLASKL---QIAENVSFYNAVISACIKADDLMEMERVYK 450
+ LI+ A ++ + + L S++ I + Y+A+I KA E E +
Sbjct: 441 YTVLIDSLGKA---NRSVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFS 497
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
M +PD+ +S+M + + K + L ++
Sbjct: 498 CMLRSGTKPDNLAYSVMLDVLLRGNETRKAWVLYRD 533
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 153/352 (43%), Gaps = 3/352 (0%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K W +A V L+ Q P T+ L+ + G E AR +FN M+ +G PT E
Sbjct: 766 KLWQKAESVVGNLR-QSGRTPDLKTWNSLMSAYAECGCYERARAIFNTMMRDGPSPTVES 824
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
LL A C + ++E +V + +++ + + + ++ A A + +Y M
Sbjct: 825 INKLLHALCVDGRLEELYVVVEELQDM-GFKISKSSILLMLDAFARAGNIFEVNKIYSSM 883
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
P +++ K E ++S M E A K ++ N++L ++
Sbjct: 884 KAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEM-EEANFKVELAIWNSMLKMYTVIED 942
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ Y++ + G++P+ T+N LI Y + R ++ S+M+ MR L TY +
Sbjct: 943 YKKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLDPKLDTYKS 1002
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+I AF + E FE++ ++G+K D + ++ ++G K +++
Sbjct: 1003 LISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAG 1062
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
I ++ + ++ + + + E E+V +K + +S + +AY +
Sbjct: 1063 IEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTEVELTTLPYSSVIDAYLR 1114
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 135/333 (40%), Gaps = 42/333 (12%)
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
V E L++ F K + +L ++G K+++ M G PT LY ++
Sbjct: 844 VVEELQDMGFKISKSSILL-MLDAFARAGNIFEVNKIYSSMKAAGYLPTIRLYRMMIELL 902
Query: 190 CRNSLIDEAFVTLNQM--------------------------KTL--------PNCQPDV 215
C+ + +A + +++M KT+ +PD
Sbjct: 903 CKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKESGLEPDE 962
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
TY+TLI R E +L Q M + P T ++ +GK +Q E++
Sbjct: 963 TTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEE 1022
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
+L S K D +T++ + + G E+ + +N GI+P T ++L+ +Y
Sbjct: 1023 LL-SKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSG 1081
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
+ V+ ++ + T+ Y++VI+A+ D K +M EG++ D + +
Sbjct: 1082 NPQEAEKVLSNLKNTEVELTTLPYSSVIDAYLRSKDYKSGIERLLEMKKEGLEPDHRIWT 1141
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSF 428
C + A F K S V L L+ +++ F
Sbjct: 1142 CFV----RAASFSKEKSEVMLL--LKALQDIGF 1168
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/337 (19%), Positives = 142/337 (42%), Gaps = 48/337 (14%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP---NCQPDVYTYS 219
A +VF+E+ G EP+ + +++ YC+ + A+ +NQ +T C P
Sbjct: 700 ASQVFSELRLSGCEPSESVCKSMVVVYCKLGFPETAYQVVNQAETKGFHFACSP------ 753
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
+Y D+ E YGK ++ + E V+ + +S
Sbjct: 754 -----------------MYTDIIE---------------AYGKLKLWQKAESVVGNLRQS 781
Query: 280 ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
PD+ T N+++S +A G + + G P + N L+ A ++
Sbjct: 782 GR-TPDLKTWNSLMSAYAECGCYERARAIFNTMMRDGPSPTVESINKLLHALCVDGRLEE 840
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+ V+E ++ + F + S+ +++AF+ G+ + + M A G + + +I
Sbjct: 841 LYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVNKIYSSMKAAGYLPTIRLYRMMIE 900
Query: 400 GYANAGLFHKVISSVRLASKLQIAE---NVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
+V + + S+++ A ++ +N+++ +D + +VY+R+KE
Sbjct: 901 LLCKG---KRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKESG 957
Query: 457 CRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
PD T++ + Y ++ ++ Y+L Q+ + L+
Sbjct: 958 LEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLD 994
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/364 (20%), Positives = 136/364 (37%), Gaps = 57/364 (15%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
ALQ+++ +K P TY L+ LGK+ + A + +EM++ GI+PT + Y+AL+
Sbjct: 421 ALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAALMSEMLDVGIKPTLQTYSALI 480
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
Y + +EA T + M +PD YS ++ + LY+DM
Sbjct: 481 CGYAKAGKREEAEDTFSCM-LRSGTKPDNLAYSVMLDVLLRGNETRKAWVLYRDMISDGH 539
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
TP+ +++ G K D +++ + M E P I SV D+
Sbjct: 540 TPSHSLYELMILGLMKENRSDDVQKTIRDMEELCGMNP-----LEISSVLVKGECFDLAA 594
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
R + G + E T ++G+Y + + ++E++++
Sbjct: 595 RQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKE----------------- 637
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE-- 424
HA G K LIN + H ++++ A +A+
Sbjct: 638 ----------------HASGSKR-------LIN--EALIVLHCKVNNIGAALDEYLADPC 672
Query: 425 -------NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
+ Y ++ C+ + E +V+ ++ C P M Y K G
Sbjct: 673 VHGWCFGGSTMYETLLHCCVANEHYAEASQVFSELRLSGCEPSESVCKSMVVVYCKLGFP 732
Query: 478 DKVY 481
+ Y
Sbjct: 733 ETAY 736
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 81/207 (39%), Gaps = 37/207 (17%)
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY--DKMSSV 343
V N ++ V++ G+ + + R G P+ +FN LI A K + + +
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELLDAMRQRGCVPDLISFNTLINARLKSGGLTPNLVVEL 284
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
++ +R + TYN ++ A S + + FE M A + D T+ +I+ Y
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
GL E ER++ ++ K PD+ T
Sbjct: 345 CGL-----------------------------------AAEAERLFIELELKGFSPDAVT 369
Query: 464 FSIMTEAYAKEGMNDKVYALEQEKLQM 490
++ + A+A+E +KV + Q+ +M
Sbjct: 370 YNSLLYAFARERNTEKVKEVYQQMQKM 396
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 67/373 (17%), Positives = 135/373 (36%), Gaps = 44/373 (11%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P Y +L +L + + A ++ +M+ +G P+ LY ++ + + D+
Sbjct: 505 KPDNLAYSVMLDVLLRGNETRKAWVLYRDMISDGHTPSHSLYELMILGLMKENRSDDVQK 564
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
T+ M+ L P + S L+K C D +L + + + T ++ LG
Sbjct: 565 TIRDMEELCGMNP-LEISSVLVKGECFDLAARQLKVAITNGYELENDTLLSI-----LGS 618
Query: 260 YGKAGMFDQMERVLSGMLESAT--------------CK--------------PDV--WTM 289
Y +G + +L + E A+ CK P V W
Sbjct: 619 YSSSGRHSEAFELLEFLKEHASGSKRLINEALIVLHCKVNNIGAALDEYLADPCVHGWCF 678
Query: 290 N------TILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
T+L + + + R G +P ++ Y K + V
Sbjct: 679 GGSTMYETLLHCCVANEHYAEASQVFSELRLSGCEPSESVCKSMVVVYCKLGFPETAYQV 738
Query: 344 MEYMRKLQFPWTSS-TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+ F + S Y ++IEA+ + + E + G D KT+ L++ YA
Sbjct: 739 VNQAETKGFHFACSPMYTDIIEAYGKLKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYA 798
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
G + + + + + V N ++ A L E+ V + +++ +
Sbjct: 799 ECGCYERARAIFNTMMRDGPSPTVESINKLLHALCVDGRLEELYVVVEELQDMGFKISKS 858
Query: 463 TFSIMTEAYAKEG 475
+ +M +A+A+ G
Sbjct: 859 SILLMLDAFARAG 871
>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 169/363 (46%), Gaps = 3/363 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A +FE +++ QP+ Y LL K+G A V +EM G+ P + Y+ L
Sbjct: 324 EAEAIFEEMRDNGL-QPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLL 382
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ AY + A + L +M+ N QP+ Y +S ++ + D ++ + ++M++
Sbjct: 383 IDAYGNAERWESARIVLKEMEA-SNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSG 441
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
V P+ + N+++ +GK D ML S +PD T NT++ G+ D
Sbjct: 442 VRPDRIFYNVLIDTFGKFNCLDHAMATFDRML-SEGIEPDTITWNTLVDCHCKAGKHDRA 500
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E +E+ G P TFNI+I ++G + +D + +++ MR + TY +I+
Sbjct: 501 EELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDI 560
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ G + M A G+K + + L+N YA GL + +S+ + +
Sbjct: 561 YGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPS 620
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
+ N++I+A K +E V + MKE +PD T++ + +A DKV ++ +
Sbjct: 621 LLALNSLINAFGKDRRDVEAFVVLQYMKENDLKPDVVTYTTLMKALILVEKFDKVPSVYE 680
Query: 486 EKL 488
E +
Sbjct: 681 EMI 683
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 155/340 (45%), Gaps = 43/340 (12%)
Query: 143 KEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTL 202
K T + ++ LG G+ E A +F EM + G++P Y ALL Y + L+ +A +
Sbjct: 305 KTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVV 364
Query: 203 NQMK---TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
++M+ LPN Q TYS LI A +A R+E + ++M+ +V PN + +L
Sbjct: 365 SEMERSGVLPNEQ----TYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILAS 420
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
Y G + + +VL M E + +PD N ++ F +D +++ + GI+P
Sbjct: 421 YRDKGEWQKTFQVLREM-EDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEP 479
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+T T+N L+ + K +D+ + E M + + ++T+N +I +F D ++
Sbjct: 480 DTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLL 539
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
M ++G+ + T+ LI+ Y +G F I C+
Sbjct: 540 TNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIE-----------------------CL-- 574
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
DD MK +P S ++ + AYA+ G++D+
Sbjct: 575 DD----------MKAAGLKPSSTMYNALLNAYAQRGLSDQ 604
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 158/340 (46%), Gaps = 6/340 (1%)
Query: 152 VLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNC 211
+L+ GQ E + F ++ + TP Y AL++A RN+ I++A + +M+
Sbjct: 174 ILIHALGQSEKLYEAF--LLSQKQNLTPLTYNALISACARNNDIEKALNLICRMRE-DGY 230
Query: 212 QPDVYTYSTLIKACVDAMRFE--LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
D+ YS +I++ + R +++ +Y+++D + + N ++ G+ KAG D+
Sbjct: 231 PSDLVNYSLIIRSLMKNNRANSSILQKIYREIDRDKLEVDVQLWNDIIVGFAKAGDLDKA 290
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
L G+++ + T+ T++ N G+ + E +E+ R+ G+ P TR +N L+
Sbjct: 291 LEFL-GVVQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAYNALLR 349
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
Y K + V+ M + TY+ +I+A+ + + ++M A ++
Sbjct: 350 GYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEASNVQP 409
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
+ F ++ Y + G + K +R + + FYN +I K + L +
Sbjct: 410 NAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATF 469
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
RM + PD+ T++ + + + K G +D+ L +E ++
Sbjct: 470 DRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMME 509
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 123/275 (44%), Gaps = 9/275 (3%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
K +W + QV + E +P Y L+ GK + A F+ M+ EGIEP
Sbjct: 424 KGEWQKTFQVLREM-EDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTI 482
Query: 181 LYTALLAAYCRNSLIDEA---FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
+ L+ +C+ D A F + + LP C T++ +I + D R++ ++ L
Sbjct: 483 TWNTLVDCHCKAGKHDRAEELFEEMMEKGYLP-CNT---TFNIMINSFGDQERWDDVKNL 538
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
+M + + PN VT ++ YGK+G FD L M ++A KP N +L+ +A
Sbjct: 539 LTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDM-KAAGLKPSSTMYNALLNAYA 597
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+G D + R+ G+ P N LI A+GK R + V++YM++
Sbjct: 598 QRGLSDQAVSAFWAMRDDGLKPSLLALNSLINAFGKDRRDVEAFVVLQYMKENDLKPDVV 657
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
TY +++A + + +E+M G D K
Sbjct: 658 TYTTLMKALILVEKFDKVPSVYEEMILSGCTPDRK 692
>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 176/375 (46%), Gaps = 26/375 (6%)
Query: 117 DHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIE 176
DHVL ++F +Q E P E T+ +L +L K+ + + A + ++ +G
Sbjct: 72 DHVLSLEFFNWVQT-----ENPSSHTLE-THSMILHILTKNRKFKSAELILKSVLVKGFI 125
Query: 177 PTPE-LYTALLAAY--CRNS--LIDEAFVTLNQMKTLPNCQ------------PDVYTYS 219
P+ L+ A+L +Y C +S + D F TL MK N P V + +
Sbjct: 126 DLPDKLFEAILYSYRMCDSSPRVFDSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCN 185
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
+ + +D R ++ Y++M ++PN T+N+V+ + K+G ++ +V M ES
Sbjct: 186 AYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEM-ES 244
Query: 280 ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
P+ + NT++ + KG ++ + R G++ TFN LI + K+ +
Sbjct: 245 VGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHE 304
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
S V M+ L + TYN +I S MG+++ +E+M G+KAD T+ LI
Sbjct: 305 ASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALIL 364
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA-CIKADDLMEMERVYKRMKEKHCR 458
G G K V+ K + N S ++A+IS CI+ + + +YK M C
Sbjct: 365 GLCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRAFQ-LYKSMVRIGCH 423
Query: 459 PDSETFSIMTEAYAK 473
P+ +TF+++ A+ K
Sbjct: 424 PNEQTFNMLVSAFCK 438
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 3/213 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+QVFE + E P + +Y L++ + G A K+ N M +G+E + +L
Sbjct: 234 KAVQVFEEM-ESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSL 292
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +C+ + EA ++MK L N P+ TY+TLI E+ LY++M
Sbjct: 293 IDGFCKEGKLHEASKVFSEMKVL-NVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNG 351
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
V + +T N ++ G K G + ++ L+ P+ T + ++S + D
Sbjct: 352 VKADILTYNALILGLCKEGKTKKAAYMVKE-LDKENLVPNASTFSALISGQCIRNNSDRA 410
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
+ Y+ G P +TFN+L+ A+ K ++
Sbjct: 411 FQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDFE 443
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 10/212 (4%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P V + N LS + +VD+ +Y++ R I P T N+++ A+ K +K V
Sbjct: 179 PTVESCNAYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQV 238
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
E M + ++YN +I + G M A+G++A+ TF LI+G+
Sbjct: 239 FEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCK 298
Query: 404 AGLFH---KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
G H KV S +++ L +A N YN +I+ + + R+Y+ M + D
Sbjct: 299 EGKLHEASKVFSEMKV---LNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKAD 355
Query: 461 SETFSIMTEAYAKEGMNDK----VYALEQEKL 488
T++ + KEG K V L++E L
Sbjct: 356 ILTYNALILGLCKEGKTKKAAYMVKELDKENL 387
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 96/225 (42%), Gaps = 7/225 (3%)
Query: 255 IVLGGYGKAGMFDQMERVLSGMLES-ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
++L G D +++ +L S C +++ A+ + + + +
Sbjct: 114 LILKSVLVKGFIDLPDKLFEAILYSYRMCDSSPRVFDSLFKTLAHMKKFRNATDTFLQMK 173
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
+G P + N + + D + + MR+ + T N V+ AF G +
Sbjct: 174 GYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLE 233
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYN 430
FE+M + G+ + ++ LI GY GL + S+V+L + ++ + NV +N
Sbjct: 234 KAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLN---SAVKLKNSMRAKGVEANVVTFN 290
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++I K L E +V+ MK + P++ T++ + +++ G
Sbjct: 291 SLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMG 335
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 94/234 (40%), Gaps = 13/234 (5%)
Query: 54 SFSSESAVAAKKRLWKEGEYPGVS------ETSIPGYRSKRTPIKNLKKKLERKAKAK-- 105
+F + ++++E E G+S T I GY R + N KL+ +AK
Sbjct: 225 AFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGY--CRKGLLNSAVKLKNSMRAKGV 282
Query: 106 -AWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELAR 164
A V T + + +A +VF +K P TY L+ + G E+ R
Sbjct: 283 EANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNV-APNTITYNTLINGHSQMGNSEMGR 341
Query: 165 KVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
+++ EM G++ Y AL+ C+ +A + ++ N P+ T+S LI
Sbjct: 342 RLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDK-ENLVPNASTFSALISG 400
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
+ LY+ M PN T N+++ + K F+ VL M E
Sbjct: 401 QCIRNNSDRAFQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFE 454
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L++ L K G+ + A + E+ +E + P ++AL++ C + D AF M
Sbjct: 358 TYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRAFQLYKSM 417
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG 264
+ C P+ T++ L+ A FE + +M ER TP + + + G G
Sbjct: 418 VRI-GCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFERCFTPGSDVLSEIYHGLCCCG 475
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 152/353 (43%), Gaps = 7/353 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
AL VF+ + + P TY LL K A + +EM +G EP Y L
Sbjct: 269 DALAVFDDMLHR-GCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVL 327
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPN--CQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
+ A C +DEA LN + LP+ C+PD TY+ ++K+ + R++ +E L +M
Sbjct: 328 INAMCNEGDVDEA---LNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTS 384
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+ P+ VT N ++ + G+ D+ V+ M E C D+ T ++IL + G+VD
Sbjct: 385 NNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHG-CVADIVTYSSILDGLCDVGRVD 443
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ +++G P+T + ++ +++ +M M P T+N V+
Sbjct: 444 DAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVV 503
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
+ G EQM G D T+ C+I+G N + +
Sbjct: 504 ASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCK 563
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
++ +N ++ D + E++ M +C PD TF+ + + ++G+
Sbjct: 564 PDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGL 616
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 157/355 (44%), Gaps = 10/355 (2%)
Query: 129 QVFEMLKEQPF--YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+V E+L E P E T+ ++ L + G + A +V + M E G Y+++L
Sbjct: 374 EVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSIL 433
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
C +D+A L+++K+ C+PD Y+T++K ++E E L +M
Sbjct: 434 DGLCDVGRVDDAVELLSRLKSY-GCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDC 492
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P+ VT N V+ + G+ D+ RV+ M E+ C PD+ T N I+ N+ +D
Sbjct: 493 PPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENG-CSPDIVTYNCIIDGLCNESCIDDAM 551
Query: 307 RWYEKFRNFGIDPETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++ G P+ TFN L+ G G R ++ +M M + P T+N VI +
Sbjct: 552 ELLSDLQSCGCKPDIVTFNTLLKGLCGVDR-WEDAEQLMANMMRSNCPPDELTFNTVITS 610
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA-E 424
G T + M G ++ T+ +++ AG K +++ L S +
Sbjct: 611 LCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAG---KAQAALELLSGMTNGTP 667
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
++ YN VIS KA + E + + M PD+ T+ + +E D+
Sbjct: 668 DLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDR 722
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 143/340 (42%), Gaps = 15/340 (4%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
L+ L G+ A +VF + G T Y ++ YCR I++A +N M P
Sbjct: 193 LIKRLCSDGRVSDAERVFAAL---GPSATVVTYNTMVNGYCRAGRIEDARRLINGMP-FP 248
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
PD +T++ LI+A R ++ DM R +P+ VT +I+L K + Q
Sbjct: 249 ---PDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQA 305
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+L M + C+PD+ T N +++ N+G VD + G P+ T+ ++
Sbjct: 306 MALLDEM-RAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLK 364
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+ + ++ ++ M T+N ++ + G + M G A
Sbjct: 365 SLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVA 424
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDLMEME 446
D T+ +++G + G +V +V L S+L+ + Y V+ + E
Sbjct: 425 DIVTYSSILDGLCDVG---RVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAE 481
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK-VYALEQ 485
+ M C PD TF+ + + ++G+ D+ + +EQ
Sbjct: 482 ELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQ 521
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 120/317 (37%), Gaps = 77/317 (24%)
Query: 122 KQWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+QW +A ++ EML P E T+ ++ L + G + A +V +M E G P
Sbjct: 475 EQWERAEELMAEMLCSD--CPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIV 532
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE-------- 232
Y ++ C S ID+A L+ +++ C+PD+ T++TL+K R+E
Sbjct: 533 TYNCIIDGLCNESCIDDAMELLSDLQSC-GCKPDIVTFNTLLKGLCGVDRWEDAEQLMAN 591
Query: 233 ---------------LIETLYQD------------MDERSVTPNTVTQNIVLGGYGKAGM 265
+I +L Q M E PN+ T +IV+ KAG
Sbjct: 592 MMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGK 651
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV----------------------- 302
+LSGM PD+ T NT++S G++
Sbjct: 652 AQAALELLSGMTNGT---PDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYR 708
Query: 303 ------------DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
D R + ++ G+ P+T +N ++ + + R D +M
Sbjct: 709 SLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSS 768
Query: 351 QFPWTSSTYNNVIEAFS 367
STY ++EA +
Sbjct: 769 GCMPDESTYVILLEALA 785
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 65/160 (40%), Gaps = 3/160 (1%)
Query: 117 DHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIE 176
D +LK QA E+L P TY ++ L K+G+ E A + MV G+
Sbjct: 644 DALLKAGKAQA--ALELLSGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLC 701
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
P Y +L CR D A L +++ PD Y+ ++ R +L
Sbjct: 702 PDTTTYRSLAYGVCREDGTDRAVRMLRRVQDT-GLSPDTTFYNDVLLGFCRDRRTDLAID 760
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
+ M P+ T I+L G+ D+ +R+L+ +
Sbjct: 761 CFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASL 800
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 147/331 (44%), Gaps = 4/331 (1%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY ++ L K+ + + A + ++ G PT Y ALL C+ ++EA L ++
Sbjct: 36 TYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 95
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMR-FELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG 264
C PDV TY++LI R FE + L+++M R + +TV ++ G +AG
Sbjct: 96 VD-NGCTPDVVTYTSLIDGLGKKKRSFEAYK-LFKEMASRGLALDTVCYTALIRGLLQAG 153
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
Q V M S C PDV T++T++ G++ R ++ G+ P +
Sbjct: 154 KIPQASSVYKTM-TSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVY 212
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
+ LI K R D ++ M+K + TYN +I+ GD F++M
Sbjct: 213 SALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLE 272
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
G K D T+ LI+G+ AG S + + NV Y +IS K L +
Sbjct: 273 AGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTK 332
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
Y+ MKE+ C PDS +S + + K G
Sbjct: 333 ASLYYQHMKERGCPPDSFVYSSLVDGLCKSG 363
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 143/346 (41%), Gaps = 39/346 (11%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ LGK + A K+F EM G+ YTAL+ + I +A
Sbjct: 102 PDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSV 161
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV--------------- 246
M T C PDV T ST+I A R +++ M+ R +
Sbjct: 162 YKTM-TSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC 220
Query: 247 --------------------TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
TP+T+T NI++ G K+G MLE A CKPDV
Sbjct: 221 KARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLE-AGCKPDV 279
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
+T N ++S F G D ++ + P T+ LI K+R K S ++
Sbjct: 280 YTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQH 339
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M++ P S Y+++++ G + F++M G+ A+++T LI A
Sbjct: 340 MKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFHLCKANR 398
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
+ +S K + + YN++ISA IK+ + E + VY+ M
Sbjct: 399 VDEAVSLFNAIRKEGMPHPYA-YNSIISALIKSGKVNEGQAVYQEM 443
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 112/278 (40%), Gaps = 1/278 (0%)
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+L Q T C D++TY+T++ + + L + + TP T N +L G
Sbjct: 20 SLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGL 79
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G ++ +L ++++ C PDV T +++ K + + +++ + G+ +
Sbjct: 80 CKMGRLEEAIDLLRKIVDNG-CTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALD 138
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T + LI + + SSV + M T + +I+ G F+
Sbjct: 139 TVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFK 198
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
M A G+ + + LI+G A + + K + YN +I K+
Sbjct: 199 SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSG 258
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
D+ + M E C+PD T++I+ + K G D
Sbjct: 259 DVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTD 296
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 107/262 (40%), Gaps = 7/262 (2%)
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
T+S LI V A +L Q+ T + T ++ K + ++ +
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
+ C P + T N +L+ G+++ K + G P+ T+ LI GKK+
Sbjct: 61 TANG-CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKR 119
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
+ + + M + Y +I G ++ M ++G D T
Sbjct: 120 SFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLST 179
Query: 397 LINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+I+G AG ++ ++VR+ ++ +A N Y+A+I KA + + +MK
Sbjct: 180 MIDGLCKAG---RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMK 236
Query: 454 EKHCRPDSETFSIMTEAYAKEG 475
+ C PD+ T++I+ + K G
Sbjct: 237 KAFCTPDTITYNILIDGLCKSG 258
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 179/380 (47%), Gaps = 39/380 (10%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+QP E TY +L ++ KSGQ LA ++ +M E I+ Y+ ++ C++ +D AF
Sbjct: 224 FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAF 283
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
N+M+ + + D+ TY+TLI +A R++ L +DM +R ++PN VT ++++
Sbjct: 284 NLFNEME-IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDS 342
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ K G + +++L M++ P+ T N+++ F + +++ + + + G DP
Sbjct: 343 FVKEGKLREADQLLKEMMQRGI-APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDP 401
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ TFNILI Y K D + M + TYN +++ F G + + F
Sbjct: 402 DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLF 461
Query: 380 EQMHAEGMKADTKTFCCLINGYAN----------------------AGLFHKVISSVRLA 417
++M + ++ D ++ L++G + G++ +I + A
Sbjct: 462 QEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNA 521
Query: 418 SKLQ-------------IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
SK+ + + YN +IS + D L + + ++++M E+ PD T+
Sbjct: 522 SKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 581
Query: 465 SIMTEAYAKEGMNDKVYALE 484
+I+ A+ G +D A E
Sbjct: 582 NILIRAHL--GDDDATTAAE 599
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 151/339 (44%), Gaps = 8/339 (2%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y+P + LL L + A ++ + MVE G +PT L+ C N + +A
Sbjct: 154 YEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAV 213
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
V +++M QP+ TY ++ + + L L + M+ER++ + V +I++ G
Sbjct: 214 VLIDRMVE-TGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K G D + + M E K D+ T NT++ F N G+ D + I P
Sbjct: 273 LCKDGSLDNAFNLFNEM-EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISP 331
Query: 320 ETRTFNILIGAY---GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME 376
TF++LI ++ GK R D++ + E M++ P T TYN++I+ F +
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQL--LKEMMQRGIAPNTI-TYNSLIDGFCKENRLEEAI 388
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
+ M ++G D TF LINGY A + R S + N YN ++
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++ L +++++ M + RPD ++ I+ + G
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 149/363 (41%), Gaps = 7/363 (1%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
A+ +F +M++ +P P + +L + K+ Q EL + +M +GI + +
Sbjct: 71 DAVDLFRDMIQSRPL--PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDE 243
++ +CR + AF T+ ++ L +PD ++TL+ C++ E +E L M E
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGY-EPDTVIFNTLLNGLCLECRVSEALE-LVDRMVE 186
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
P +T N ++ G G ++ M+E+ +P+ T +L+V GQ
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGF-QPNEVTYGPVLNVMCKSGQTA 245
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ K I + ++I+I K D ++ M F TYN +I
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
F + G M + + TF LI+ + G + ++ + IA
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
N YN++I K + L E ++ M K C PD TF+I+ Y K D L
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 484 EQE 486
+E
Sbjct: 426 FRE 428
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 131/295 (44%), Gaps = 11/295 (3%)
Query: 132 EMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
++LKE Q P TY L+ K + E A ++ + M+ +G +P + L+ Y
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
C+ + ID+ +M +L + TY+TL++ + + E+ + L+Q+M R V P+
Sbjct: 414 CKANRIDDGLELFREM-SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLS--GMLESATCKPDVWTMNTILSVFANKGQVDMMER 307
V+ I+L G G ++E+ L G +E + + D+ I+ N +VD
Sbjct: 473 IVSYKILLDGLCDNG---ELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWD 529
Query: 308 WYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS 367
+ G+ + R +NI+I +K K + M + TYN +I A
Sbjct: 530 LFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHL 589
Query: 368 DMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL---FHKVISSVRLASK 419
DA E+M + G AD T +IN ++ L F ++S+ R + K
Sbjct: 590 GDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDMLSTTRASLK 644
>gi|302809589|ref|XP_002986487.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
gi|300145670|gb|EFJ12344.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
Length = 773
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 183/417 (43%), Gaps = 46/417 (11%)
Query: 115 FSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG 174
F + + W +AL++F+ ++ Q + +P E Y ++ ++G+ G E ++F +M E
Sbjct: 53 FREFAARSDWHRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDMPEND 112
Query: 175 IEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV-DAMRFEL 233
++ +TAL+ AY RN + + L +MK +P++ TY+T++ AC + +E
Sbjct: 113 VKWNVYAFTALINAYGRNGQYEASLHLLARMKK-ERVEPNLITYNTVLNACSKGGLDWEG 171
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC----------- 282
+ L+ M + P+ +T N +L G+ +Q V M ES
Sbjct: 172 LLNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVD 231
Query: 283 -----------------------KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
PD+ N+++ +A+ G V +++ + G P
Sbjct: 232 TFAGSNQLGRVEELLREMEDEGNSPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAP 291
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ T++ L+ YG + ++++ S+ M++L P T +TYN++I+ F + G + F
Sbjct: 292 DVETYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGYFQESINLF 351
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNA---VISAC 436
M G+K D T+ L++ GL + + ++ + E+ A +IS+
Sbjct: 352 HDMVDSGVKPDDATYSALLSVCGRGGLTRE---AAKIHQHMLTNESTPSLEASAGLISSY 408
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM----NDKVYALEQEKLQ 489
K + Y R++E P + + + YAK G+ +YA+ + Q
Sbjct: 409 GKMAMYKDALVSYYRIREAGLDPQVSAYDALIQGYAKGGLYVEAGSTLYAMNKAGFQ 465
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 154/369 (41%), Gaps = 6/369 (1%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
NTV S L W L +F ++ + QP TY LL G E A VF
Sbjct: 156 NTVLNACSKGGL--DWEGLLNLFAQMRHEGI-QPDLITYNTLLSACSSRGLVEQAAMVFK 212
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
M E G+ Y +L+ + ++ + L +M+ N PD+ Y++LI+A DA
Sbjct: 213 TMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGN-SPDIAGYNSLIEAYADA 271
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
+++ M P+ T + +L YG G F+Q+ + S M E +T P V T
Sbjct: 272 GNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKELST-PPTVAT 330
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
N+++ VF G + + G+ P+ T++ L+ G+ + + + + ++M
Sbjct: 331 YNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHML 390
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
+ + +I ++ M K ++ ++ G+ + LI GYA GL+
Sbjct: 391 TNESTPSLEASAGLISSYGKMAMYKDALVSYYRIREAGLDPQVSAYDALIQGYAKGGLYV 450
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH-CRPDSETFSIM 467
+ S++ +K VS N+V+ A K E + +++K D T +
Sbjct: 451 EAGSTLYAMNKAGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQKEGSEVDERTHETL 510
Query: 468 TEAYAKEGM 476
Y G+
Sbjct: 511 LGVYCDMGL 519
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 100/442 (22%), Positives = 165/442 (37%), Gaps = 110/442 (24%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QA VF+ + E TY L+ S Q ++ EM +EG P Y +L
Sbjct: 206 QAAMVFKTMNESGVVADAV-TYKSLVDTFAGSNQLGRVEELLREMEDEGNSPDIAGYNSL 264
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ AY + A QM+ C PDV TYSTL++ + FE + +L+ DM E S
Sbjct: 265 IEAYADAGNVHGAAGVFKQMQR-GGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKELS 323
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV--- 302
P T N ++ +G+ G F + + M++S KPD T + +LSV G
Sbjct: 324 TPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGV-KPDDATYSALLSVCGRGGLTREA 382
Query: 303 ---------------------------------DMMERWYEKFRNFGIDPETRTFNILIG 329
D + +Y + R G+DP+ ++ LI
Sbjct: 383 AKIHQHMLTNESTPSLEASAGLISSYGKMAMYKDALVSYY-RIREAGLDPQVSAYDALIQ 441
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG-DAKHMEYTFEQMHAEGMK 388
Y K +Y + S + M K F S+ N+V+EA+S +G + +E+ E EG +
Sbjct: 442 GYAKGGLYVEAGSTLYAMNKAGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQKEGSE 501
Query: 389 ADTKT-----------------------------------FCCLIN--------GYAN-- 403
D +T +C L++ YA
Sbjct: 502 VDERTHETLLGVYCDMGLLEEAKEEFVIIKETSKVPGARVYCLLLSLCVRRSKWDYATQL 561
Query: 404 ------AGLFHKVISSVRLAS-----------------KLQ-IAENVSFYNAVISACIKA 439
AG H+V+ + + KL+ + E++ FYNA++ +
Sbjct: 562 LDEMIAAGGLHQVVVGIVRGTYDADFSWQVVEYAFDGLKLRDMEESMDFYNALVELLVYC 621
Query: 440 DDLMEMERVYKRMKEKHCRPDS 461
+ RV ++ P++
Sbjct: 622 NQKARAARVLADAMQRGAFPEA 643
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 161/343 (46%), Gaps = 2/343 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY ++ L K G +LA + N+M IE ++ ++ + C+ +D+A
Sbjct: 146 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 205
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M+T +P+V TYS+LI R+ L DM E+ + PN VT N ++ +
Sbjct: 206 LFKEMET-KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 264
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G F + E++ M++ + PD++T N++++ F ++D ++ +E + P+
Sbjct: 265 VKEGKFVEAEKLHDDMIKRSI-DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 323
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+N LI + K + + + + M + TY +I+ GD + + F+
Sbjct: 324 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 383
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
QM ++G+ D T+ L++G N G K + K +I ++ Y +I KA
Sbjct: 384 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 443
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ + ++ + K +P+ T++ M + + + YAL
Sbjct: 444 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 486
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 145/348 (41%), Gaps = 6/348 (1%)
Query: 133 MLKEQPFYQPKEGTYMKLLVLLGKSGQPEL--ARKVFNEMVEEGIEPTPELYTALLAAYC 190
M+K +P P + KLL + K + +L + + +M++ G EP+ ++LL YC
Sbjct: 33 MVKSRPL--PSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYC 90
Query: 191 RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT 250
I +A ++QM + +PD T++TLI + L M +R PN
Sbjct: 91 HGKRISDAVALVDQMVEM-GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 149
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYE 310
VT +V+ G K G D +L+ M E+A + DV NTI+ VD ++
Sbjct: 150 VTYGVVVNGLCKRGDIDLAFNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 208
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
+ GI P T++ LI + S ++ M + + T+N +I+AF G
Sbjct: 209 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 268
Query: 371 DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYN 430
E + M + D T+ LING+ K ++ YN
Sbjct: 269 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYN 328
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+I K+ + + +++ M + D+ T++ + + +G D
Sbjct: 329 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 376
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 173/424 (40%), Gaps = 45/424 (10%)
Query: 57 SESAVAAKKRLWKEGEYPG-VSETSIPGYRSKRTPIK---NLKKKLERKAKAKAWVNTVA 112
+ AVA R+ + G P V+ + KR I NL K+E AK +A V +
Sbjct: 130 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME-AAKIEADV-VIF 187
Query: 113 ETFSDHVLK-KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMV 171
T D + K + AL +F+ ++ + +P TY L+ L G+ A ++ ++M+
Sbjct: 188 NTIIDSLCKYRHVDDALNLFKEMETKGI-RPNVVTYSSLISCLCSYGRWSDASQLLSDMI 246
Query: 172 EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRF 231
E+ I P + AL+ A+ + EA + M + PD++TY++LI R
Sbjct: 247 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK-RSIDPDIFTYNSLINGFCMHDRL 305
Query: 232 ELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNT 291
+ + +++ M + P+ T N ++ G+ K+ + + M D T T
Sbjct: 306 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV-GDTVTYTT 364
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
++ + G D ++ +++ + G+ P+ T++IL+ +K V +YM+K +
Sbjct: 365 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 424
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
Y +IE G F + +G+K
Sbjct: 425 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP---------------------- 462
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
NV YN +IS L E + K+MKE PDS T++ + A+
Sbjct: 463 -------------NVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAH 509
Query: 472 AKEG 475
++G
Sbjct: 510 LRDG 513
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 117/273 (42%), Gaps = 11/273 (4%)
Query: 213 PDVYTYSTLIKACVDAMRFELIETL--YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
P ++ ++ L+ A +F+L+ +L M + P+ VT + +L GY
Sbjct: 40 PSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 99
Query: 271 RVLSGMLESATCKPDVWTMNTILS--VFANKGQ--VDMMERWYEKFRNFGIDPETRTFNI 326
++ M+E +PD T T++ NK V +++R ++ G P T+ +
Sbjct: 100 ALVDQMVEMGY-RPDTITFTTLIHGLFLHNKASEAVALVDRMVQR----GCQPNLVTYGV 154
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
++ K+ D +++ M + +N +I++ F++M +G
Sbjct: 155 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 214
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
++ + T+ LI+ + G + + + +I N+ +NA+I A +K +E E
Sbjct: 215 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 274
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+++ M ++ PD T++ + + DK
Sbjct: 275 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 307
>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
Length = 597
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 202/453 (44%), Gaps = 19/453 (4%)
Query: 45 SVTSTNKHTSFSSESAVAAKKRLWK------EGEYPGVS---ETSIPGYRSKRTPIKNLK 95
V T S + A K R WK +G +P +S + + +++ T ++
Sbjct: 64 GVARTFDRKKISRKRGGAIKGRGWKYGSGFVDGVFPVLSPMAQDVLELVQTRGTDAASVW 123
Query: 96 KKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLG 155
+ L++ +A + + L +QW + V E + + ++P Y L+ G
Sbjct: 124 ESLDKIPQAHDLWDDIVNVAVQLRLNRQWEPIITVCEWVLRRSSFRPDIICYNLLIDAYG 183
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK--TLPNCQP 213
+ Q A + ++E PT + Y LL AYC + + A +++M+ +P P
Sbjct: 184 QKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISEMQRNGIP---P 240
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
Y+ + + A E +YQ M + NT T +++ YGKA RV
Sbjct: 241 TATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTZTYXLMINVYGKANQPMSSLRVF 300
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
M +S CKP++ T +++ FA +G + E +E+ + G +P+ +N L+ AY +
Sbjct: 301 REM-KSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSR 359
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+ S + M + ++YN +++AF G + E F+++ +GM+ K+
Sbjct: 360 AGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKS 419
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
L++ +A +G + + K + + NA+++A +A L +MER++ M+
Sbjct: 420 HMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAME 479
Query: 454 EKH----CRPDSETFSIMTEAYAKEGMNDKVYA 482
PD+ T++++ AY + G D++ A
Sbjct: 480 RGDGASAGAPDTSTYNVLVNAYGRAGYLDRMEA 512
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 169/375 (45%), Gaps = 35/375 (9%)
Query: 110 TVAETFSDHVLKKQWFQ-ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
TV + D +LK + + A++V++ +K++ Z TY ++ + GK+ QP + +VF
Sbjct: 243 TVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTZ-TYXLMINVYGKANQPMSSLRVFR 301
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
EM G +P YTAL+ A+ R L ++A +M+ + +PDVY Y+ L++A A
Sbjct: 302 EMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGH-EPDVYAYNALMEAYSRA 360
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
+ ++ M+ P+ + NI++ +G+AG+ + E + + +P + +
Sbjct: 361 GLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGM-RPTMKS 419
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
+LS A G V E + G+ P+T N ++ AYG+ D M + M
Sbjct: 420 HMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAME 479
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
+ GD A DT T+ L+N Y AG
Sbjct: 480 R--------------------GDG-----------ASAGAPDTSTYNVLVNAYGRAGYLD 508
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
++ ++ R + +A +V + + I A + + + RV++ M + C PD+ T ++
Sbjct: 509 RMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKVLL 568
Query: 469 EAYAKEGMNDKVYAL 483
A + E ++V A+
Sbjct: 569 AACSDERQVEQVTAI 583
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 147/323 (45%), Gaps = 9/323 (2%)
Query: 99 ERKAKAKAWVNTVAETFSDHVLKK--QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGK 156
+R K + NT +V K Q +L+VF +K +P TY L+ +
Sbjct: 266 QRMKKERCRTNTZTYXLMINVYGKANQPMSSLRVFREMKSVGC-KPNICTYTALVNAFAR 324
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
G E A +VF EM + G EP Y AL+ AY R L A + M+ + C+PD
Sbjct: 325 EGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHM-GCEPDRA 383
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
+Y+ L+ A A + E +Q++ ++ + P + ++L + ++G + E V++
Sbjct: 384 SYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMA-Q 442
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF-RNFGID---PETRTFNILIGAYG 332
L + +PD + +N +L+ + G++D MER + R G P+T T+N+L+ AYG
Sbjct: 443 LHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGASAGAPDTSTYNVLVNAYG 502
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
+ D+M + + T+ + I A++ + FE+M G D
Sbjct: 503 RAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAG 562
Query: 393 TFCCLINGYANAGLFHKVISSVR 415
T L+ ++ +V + VR
Sbjct: 563 TAKVLLAACSDERQVEQVTAIVR 585
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 102/242 (42%), Gaps = 1/242 (0%)
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
S P+ + N+++ YG+ + E +LE A C P T +L + GQ+
Sbjct: 167 SFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLE-ARCVPTEDTYALLLRAYCGSGQLHR 225
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
E + + GI P +N + K R +K V + M+K + + TY +I
Sbjct: 226 AEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTZTYXLMIN 285
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
+ F +M + G K + T+ L+N +A GL K +
Sbjct: 286 VYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEP 345
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
+V YNA++ A +A ++ M+ C PD +++I+ +A+ + G++ + A
Sbjct: 346 DVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAF 405
Query: 485 QE 486
QE
Sbjct: 406 QE 407
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 82/186 (44%), Gaps = 5/186 (2%)
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
R P+ +N+LI AYG+KR + + + + + T TY ++ A+ G
Sbjct: 163 LRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQ 222
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNA 431
E +M G+ + ++G A K + + K + N Y
Sbjct: 223 LHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTZTYXL 282
Query: 432 VISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQML 491
+I+ KA+ M RV++ MK C+P+ T++ + A+A+EG+ +K + +E
Sbjct: 283 MINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEE----- 337
Query: 492 LEASGH 497
++ +GH
Sbjct: 338 MQQAGH 343
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ G++G + F + G+ +T+ + AY R +
Sbjct: 489 PDTSTYNVLVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRV 548
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVT 247
+M C PD T L+ AC D + E + + + M + + T
Sbjct: 549 FEEMVD-AGCYPDAGTAKVLLAACSDERQVEQVTAIVRSMHKDAKT 593
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 163/355 (45%), Gaps = 9/355 (2%)
Query: 125 FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+A+ +F ++E+ +P TY ++ + K + E R++ +EMVE+G+ P+ Y A
Sbjct: 91 MEAINLFSEMRERGC-EPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNA 149
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ YC+ +++ A L+ M + +C P+ TY+ LI L M E
Sbjct: 150 LIDGYCKEGMVEAAQEILDLMHS-NSCNPNERTYNELICGFCRKKNVHRAMALLSKMLES 208
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+TP+ VT N ++ G K G D R+L+ M E+ PD WT + + KG+++
Sbjct: 209 RLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGV-VPDQWTYSVFIDTLCKKGRIEE 267
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ + GI + LI Y K D +S+++ M SSTYN +I+
Sbjct: 268 ANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALID 327
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF---HKVISSVRLASKLQ 421
+ E M +G+K T+ LI G F H+++ + ++S Q
Sbjct: 328 GLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQM-VSSGYQ 386
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+V Y A I A ++ E E + M E+ PD+ T++++ +AY G+
Sbjct: 387 --PDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGL 439
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 132/312 (42%), Gaps = 2/312 (0%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A VFN M ++G YT L+ C +DE +M+ +C P V TY+ ++
Sbjct: 23 AFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMRE-DDCYPTVRTYTVIV 81
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
A ++ R L+ +M ER PN T +++ K ++ R+L M+E
Sbjct: 82 HALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGL- 140
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
P V T N ++ + +G V+ + + + +P RT+N LI + +K+ + +
Sbjct: 141 VPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMA 200
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
++ M + + + TYN++I +G M+ G+ D T+ I+
Sbjct: 201 LLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLC 260
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
G + + I N Y A+I KA + + + RM + C P+S
Sbjct: 261 KKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSS 320
Query: 463 TFSIMTEAYAKE 474
T++ + + KE
Sbjct: 321 TYNALIDGLCKE 332
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 135/363 (37%), Gaps = 37/363 (10%)
Query: 117 DHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIE 176
D K+ +A Q L P E TY +L+ + A + ++M+E +
Sbjct: 152 DGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLT 211
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
P+ Y +L+ C+ +D A+ LN M PD +TYS I R E
Sbjct: 212 PSVVTYNSLIHGQCKIGYLDSAYRLLNLMNE-NGVVPDQWTYSVFIDTLCKKGRIEEANV 270
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
L+ + E+ + N V ++ GY KAG D +L ML + C P+ T N ++
Sbjct: 271 LFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRML-TEDCLPNSSTYNALIDGL 329
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
+ +V E G+ T+ ILI A K+ +D +++ M +
Sbjct: 330 CKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDV 389
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
Y I AF G+ K E M G+ D T+ +I+ Y GL
Sbjct: 390 YIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLL--------- 440
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
N +F V KRM + C P T+S + + KE +
Sbjct: 441 --------NPAF------------------DVLKRMFDTGCDPSHHTYSCLIKHLLKEEL 474
Query: 477 NDK 479
K
Sbjct: 475 TKK 477
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 92/420 (21%), Positives = 162/420 (38%), Gaps = 39/420 (9%)
Query: 83 GYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQV-FEMLKEQPFYQ 141
GY + NL E W +V F D + KK + V F LKE+ +
Sbjct: 228 GYLDSAYRLLNLMN--ENGVVPDQWTYSV---FIDTLCKKGRIEEANVLFNSLKEKGI-K 281
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
E Y L+ K+G+ + A + + M+ E P Y AL+ C+ + EA +
Sbjct: 282 ANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLL 341
Query: 202 LNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+ M K L P TY+ LI A + F+ + M P+ +
Sbjct: 342 MESMIQKGLKCTVP---TYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHA 398
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV----DMMERWYEKFRNF 315
+ G + E ++S M E PD T ++ + G + D+++R ++
Sbjct: 399 FCTRGNIKEAEDMMSMMFERGV-MPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDT---- 453
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA-KH 374
G DP T++ LI K+ + K +V + NV F+D+ D K
Sbjct: 454 GCDPSHHTYSCLIKHLLKEELTKKYKNV----------ALCDSIPNVF--FADVADVWKM 501
Query: 375 MEY-----TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFY 429
M++ FE+M G + T+ LI G G ++ ++ + + Y
Sbjct: 502 MKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIY 561
Query: 430 NAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
N++++ C + + R+ M E P E+ +++ +EG +K + LQ
Sbjct: 562 NSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQ 621
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 102/240 (42%), Gaps = 1/240 (0%)
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
+++ M ++ N V+ ++ G + G D+ + M E C P V T I+
Sbjct: 25 SVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMRED-DCYPTVRTYTVIVHA 83
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
G+ + + R G +P T+ ++I A K+ ++ +++ M + +
Sbjct: 84 LFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPS 143
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
TYN +I+ + G + + + MH+ + +T+ LI G+ H+ ++ +
Sbjct: 144 VPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLS 203
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ ++ +V YN++I K L R+ M E PD T+S+ + K+G
Sbjct: 204 KMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKG 263
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 104/215 (48%), Gaps = 10/215 (4%)
Query: 82 PGYRSKRTPIKNL-KKKLERKAKAKAWVNTVAETF-SD--HVLKKQWFQ-ALQVFEMLKE 136
P + + IK+L K++L +K K A +++ F +D V K F+ AL++FE + E
Sbjct: 457 PSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLE 516
Query: 137 QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLID 196
P TY KL++ L K G+ +A+K+F+ M E G+ P+ +Y +LL C +
Sbjct: 517 HGC-SPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYG 575
Query: 197 EAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIV 256
+A + M + P + + + L + E + ++ ++ + + V I+
Sbjct: 576 DAVRLVGAMMEHGH-LPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKIL 634
Query: 257 LGGYGKAGMFDQMERVLSGMLESATCK--PDVWTM 289
+ G K G+ D +L G++E+ C+ P + M
Sbjct: 635 IDGLLKNGLSDGCSELL-GVMEARGCQIHPQTYRM 668
>gi|255539196|ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 169/381 (44%), Gaps = 35/381 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P+ T + ++ LG SG+ A +F EM + G++P Y LL Y + ++ +A
Sbjct: 289 PRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFI 348
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+++M+ PD TYS LI A +A R+E + ++M+ ++ PN+ + +L Y
Sbjct: 349 VSEMER-SGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYR 407
Query: 262 KAGMFDQMERVLSGMLESA------------------TC----------------KPDVW 287
G + + +VL M S +C +PD
Sbjct: 408 DRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTV 467
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T NT++ + E +E+ G P TFNI+I ++G++ +D + ++M M
Sbjct: 468 TWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNM 527
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
R L TY +I+ + G E M + G+K + + LIN YA GL
Sbjct: 528 RSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLS 587
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ +++ RL + ++ N++I+A + E V K MKE +PD T++ +
Sbjct: 588 EQAVNAFRLMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTL 647
Query: 468 TEAYAKEGMNDKVYALEQEKL 488
+A + +KV ++ +E +
Sbjct: 648 MKALIRVDKFNKVPSVYEEMI 668
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 158/349 (45%), Gaps = 14/349 (4%)
Query: 136 EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI 195
E+ P E TY L+ +G+ E AR V EM I P +++ +LA+Y
Sbjct: 353 ERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEW 412
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIK-----ACVDAMRFELIETLYQDMDERSVTPNT 250
++F L +MK +PD + Y+ +I +C+D ++T + M + P+T
Sbjct: 413 QKSFQVLKEMKN-SGVRPDRHFYNVMIDTFGKFSCLD----HAMDT-FDKMLSEGIQPDT 466
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYE 310
VT N ++ + KA + ++ E + M+E P V T N +++ F + + D ++
Sbjct: 467 VTWNTLIDCHCKAELHERAEELFEEMMEKG-FSPCVTTFNIMINSFGEQERWDDVKTLMG 525
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
R+ G+ P T+ LI YGK + +E M+ +S+ YN +I A++ G
Sbjct: 526 NMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKG 585
Query: 371 DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYN 430
++ F M A+ +K LIN + + S ++ + + +V Y
Sbjct: 586 LSEQAVNAFRLMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYT 645
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA--YAKEGMN 477
++ A I+ D ++ VY+ M C PD + +++ A Y K+ +N
Sbjct: 646 TLMKALIRVDKFNKVPSVYEEMILAGCTPDRKARAMLRSALKYMKQTLN 694
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 151/314 (48%), Gaps = 4/314 (1%)
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE--LIE 235
+P Y AL+ A RN+ +++A +++M+ D YS +I++ V + R + +++
Sbjct: 183 SPLTYNALINACARNNDLEKAINLISRMRQ-DGYPSDFVNYSLIIQSLVRSNRIDSPILQ 241
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
LY ++ + + N ++ G+ KAG ++ L GM++++ P T+ ++S
Sbjct: 242 KLYSEIQCDKLELDVQLSNDIIVGFAKAGDPNKAMEFL-GMVQASGLSPRTATLIAVISA 300
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
+ G++ E +E+ ++ G+ P+TR +N L+ Y K M ++ M +
Sbjct: 301 LGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPD 360
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
TY+ +I+A+S+ G + ++M A + ++ F ++ Y + G + K ++
Sbjct: 361 ECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLK 420
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + FYN +I K L + +M + +PD+ T++ + + + K
Sbjct: 421 EMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAE 480
Query: 476 MNDKVYALEQEKLQ 489
++++ L +E ++
Sbjct: 481 LHERAEELFEEMME 494
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 181/411 (44%), Gaps = 15/411 (3%)
Query: 81 IPGYRSKRTPIKNLKKKLERKAKAKAWV--NTVAETFSDHVLKKQWFQALQVFEMLKEQP 138
I GY K I N L+R + + V NT+ + D + QA++V + + ++
Sbjct: 179 ISGY-CKAGEINNALSVLDRMSVSPDVVTYNTILRSLCD---SGKLKQAMEVLDRMLQRD 234
Query: 139 FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA 198
Y P TY L+ + A K+ +EM + G P Y L+ C+ +DEA
Sbjct: 235 CY-PDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 199 FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
LN M + CQP+V T++ ++++ R+ E L DM + +P+ VT NI++
Sbjct: 294 IKFLNDMPS-SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN 352
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
+ G+ + +L M + C+P+ + N +L F + ++D + E+ + G
Sbjct: 353 FLCRKGLLGRAIDILEKMPKHG-CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS---TYNNVIEAFSDMGDAKHM 375
P+ T+N ++ A K K+ +E + +L S TYN VI+ + G
Sbjct: 412 PDIVTYNTMLTALCKD---GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
++M A+ +K DT T+ L+ G + G + I ++ + N +N+++
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLG 528
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
K M + C+P +++I+ E A EGM + L E
Sbjct: 529 LCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNE 579
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 127/267 (47%), Gaps = 7/267 (2%)
Query: 123 QWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
+W A ++ +ML++ + P T+ L+ L + G A + +M + G +P
Sbjct: 324 RWMDAEKLLADMLRKG--FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLS 381
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQD 240
Y LL +C+ +D A L +M + C PD+ TY+T++ A C D + +E L Q
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVS-RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ- 439
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
+ + +P +T N V+ G KAG + ++L M + KPD T ++++ + +G
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM-RAKDLKPDTITYSSLVGGLSREG 498
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+VD +++ +F G+ P TFN ++ K R D+ + YM T ++Y
Sbjct: 499 KVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYT 558
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGM 387
+IE + G AK ++ +G+
Sbjct: 559 ILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 145/360 (40%), Gaps = 42/360 (11%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
+ G+ A K+ + G P Y +++ YC+ I+ A L++M PDV
Sbjct: 149 RMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV----SPDV 204
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
TY+T++++ D+ + + + M +R P+ +T I++ + Q ++L
Sbjct: 205 VTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDE 264
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVD-----------------------------MME 306
M + C PDV T N +++ +G++D
Sbjct: 265 MRDRG-CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG 323
Query: 307 RWYEKFRNF------GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
RW + + G P TFNILI +K + + ++E M K S +YN
Sbjct: 324 RWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYN 383
Query: 361 NVIEAFS-DMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
++ F + + +EY E+M + G D T+ ++ G + + S
Sbjct: 384 PLLHGFCKEKKMDRAIEY-LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ + YN VI KA + ++ M+ K +PD+ T+S + ++EG D+
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 123/331 (37%), Gaps = 41/331 (12%)
Query: 191 RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT 250
R ++E F L M N PD+ +TLI+ + + + ++ P+
Sbjct: 114 RTGELEEGFKFLENMVYHGNV-PDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDV 172
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD------- 303
+T N+++ GY KAG + VL M + PDV T NTIL + G++
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRM----SVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 304 -MMER---------------------------WYEKFRNFGIDPETRTFNILIGAYGKKR 335
M++R ++ R+ G P+ T+N+L+ K+
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
D+ + M T+N ++ + G E M +G TF
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
LIN GL + I + K N YN ++ K + +RM +
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 456 HCRPDSETFSIMTEAYAKEG-MNDKVYALEQ 485
C PD T++ M A K+G + D V L Q
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 174/369 (47%), Gaps = 9/369 (2%)
Query: 121 KKQWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
K + A+++F EM+K ++P TY ++ L K G +A ++ +M E+G +P
Sbjct: 23 KAKIMDAVKLFDEMVKMG--HEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNV 80
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
Y ++ + C++ L+ EA ++M + +P PDV+TYS+++ + R +L
Sbjct: 81 VAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIP---PDVFTYSSILHGFCNLGRVNEATSL 137
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
++ M ER+V PN VT I++ G K M + V M E +PDV+T N ++ +
Sbjct: 138 FKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGL-EPDVYTYNALVDGYC 196
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
++ Q+D ++ + G P R++NILI + K D+ ++ M
Sbjct: 197 SRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIF 256
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
TY+ ++ F +G + + ++M + G+ + T+ +++G G + ++
Sbjct: 257 TYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAM 316
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
+ +I N+ Y +I L ++ + K +P T+++M K G++
Sbjct: 317 QESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLS 376
Query: 478 DKVYALEQE 486
++ L +E
Sbjct: 377 NEACELFRE 385
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 172/379 (45%), Gaps = 10/379 (2%)
Query: 94 LKKKLERKAKAKAWVNTVA-ETFSDHVLKKQWF-QALQVF-EMLKEQPFYQPKEGTYMKL 150
L KK+E K N VA T D + K + +A+ F EM+KE P TY +
Sbjct: 67 LLKKMEEKG---CKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEG--IPPDVFTYSSI 121
Query: 151 LVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPN 210
L G+ A +F +MVE + P +T L+ C+ +I EA++ M T
Sbjct: 122 LHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETM-TEKG 180
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
+PDVYTY+ L+ + + + L+ MD + PN + NI++ G+ K+G D+ +
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
+L+ M + PD++T +T++ F G+ + ++ ++G+ P T++I++
Sbjct: 241 GLLAEM-SHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDG 299
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
K D+ +++ M++ + Y +IE G + F + +G++
Sbjct: 300 LCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPT 359
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
T+ +I+G GL ++ R + N YN +I ++ D R+ +
Sbjct: 360 VVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIE 419
Query: 451 RMKEKHCRPDSETFSIMTE 469
M K DS TF ++++
Sbjct: 420 EMVGKGFSADSSTFRMLSD 438
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 138/314 (43%), Gaps = 2/314 (0%)
Query: 170 MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM 229
M + G++PT + LL+ C + I +A ++M + + +PDV TYST+I
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGH-EPDVITYSTIINGLCKMG 59
Query: 230 RFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM 289
+ L + M+E+ PN V N ++ K + + S M++ PDV+T
Sbjct: 60 NTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGI-PPDVFTY 118
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
++IL F N G+V+ +++ + P TF ILI KKRM + V E M +
Sbjct: 119 SSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTE 178
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
TYN +++ + + F M +G + +++ LING+ +G +
Sbjct: 179 KGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDE 238
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+ S + ++ Y+ ++ + E + + K M P+ T+SI+ +
Sbjct: 239 AKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLD 298
Query: 470 AYAKEGMNDKVYAL 483
K G D+ + L
Sbjct: 299 GLCKHGHLDEAFEL 312
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 106/247 (42%), Gaps = 3/247 (1%)
Query: 241 MDERSVTPNTVTQNIVLGGY-GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
M + + P VT N +L G KA + D + ++ M++ +PDV T +TI++
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAV-KLFDEMVKMGH-EPDVITYSTIINGLCKM 58
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G M + +K G P +N +I + K R+ + M K P TY
Sbjct: 59 GNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTY 118
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
++++ F ++G F+QM + + TF LI+G + + ++
Sbjct: 119 SSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTE 178
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ +V YNA++ + E ++++ M K C P+ +++I+ + K G D+
Sbjct: 179 KGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDE 238
Query: 480 VYALEQE 486
L E
Sbjct: 239 AKGLLAE 245
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 161/343 (46%), Gaps = 2/343 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY ++ L K G +LA + N+M IE ++ ++ + C+ +D+A
Sbjct: 147 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 206
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M+T +P+V TYS+LI R+ L DM E+ + PN VT N ++ +
Sbjct: 207 LFKEMET-KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 265
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G F + E++ M++ + PD++T N++++ F ++D ++ +E + P+
Sbjct: 266 VKEGKFVEAEKLHDDMIKRSI-DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 324
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+N LI + K + + + + M + TY +I+ GD + + F+
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 384
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
QM ++G+ D T+ L++G N G K + K +I ++ Y +I KA
Sbjct: 385 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 444
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ + ++ + K +P+ T++ M + + + YAL
Sbjct: 445 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 487
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 137/333 (41%), Gaps = 2/333 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ + Q LA + +M++ G EP+ ++LL YC I +A ++QM
Sbjct: 47 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 106
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ +PD T++TLI + L M +R PN VT +V+ G K G
Sbjct: 107 VEM-GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 165
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D +L+ M E+A + DV NTI+ VD +++ GI P T++
Sbjct: 166 IDLAFNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 224
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
LI + S ++ M + + T+N +I+AF G E + M
Sbjct: 225 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 284
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
+ D T+ LING+ K ++ YN +I K+ + +
Sbjct: 285 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 344
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+++ M + D+ T++ + + +G D
Sbjct: 345 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 377
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 173/424 (40%), Gaps = 45/424 (10%)
Query: 57 SESAVAAKKRLWKEGEYPG-VSETSIPGYRSKRTPIK---NLKKKLERKAKAKAWVNTVA 112
+ AVA R+ + G P V+ + KR I NL K+E AK +A V +
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME-AAKIEADV-VIF 188
Query: 113 ETFSDHVLK-KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMV 171
T D + K + AL +F+ ++ + +P TY L+ L G+ A ++ ++M+
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGI-RPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 172 EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRF 231
E+ I P + AL+ A+ + EA + M + PD++TY++LI R
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK-RSIDPDIFTYNSLINGFCMHDRL 306
Query: 232 ELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNT 291
+ + +++ M + P+ T N ++ G+ K+ + + M D T T
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV-GDTVTYTT 365
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
++ + G D ++ +++ + G+ P+ T++IL+ +K V +YM+K +
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
Y +IE G F + +G+K
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP---------------------- 463
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
NV YN +IS L E + K+MKE PDS T++ + A+
Sbjct: 464 -------------NVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAH 510
Query: 472 AKEG 475
++G
Sbjct: 511 LRDG 514
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 140/341 (41%), Gaps = 4/341 (1%)
Query: 133 MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRN 192
M+K +P P + KLL + K + +L + +M GI Y L+ +CR
Sbjct: 1 MVKSRPL--PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRR 58
Query: 193 SLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVT 252
S I A L +M L +P + T S+L+ R L M E P+T+T
Sbjct: 59 SQISLALALLGKMMKL-GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTIT 117
Query: 253 QNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF 312
++ G + ++ M++ C+P++ T +++ +G +D+ K
Sbjct: 118 FTTLIHGLFLHNKASEAVALVDRMVQRG-CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
Query: 313 RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
I+ + FN +I + K R D ++ + M TY+++I G
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAV 432
M + + + TF LI+ + G F + K I ++ YN++
Sbjct: 237 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
I+ D L + +++++ M K C PD +T++ + + + K
Sbjct: 297 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/191 (17%), Positives = 78/191 (40%)
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
+++T N +++ F + Q+ + K G +P T + L+ Y + +++
Sbjct: 44 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 103
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
+ M ++ + + T+ +I A ++M G + + T+ ++NG
Sbjct: 104 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 163
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
G + + +I +V +N +I + K + + ++K M+ K RP+ T+
Sbjct: 164 GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223
Query: 465 SIMTEAYAKEG 475
S + G
Sbjct: 224 SSLISCLCSYG 234
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 64/165 (38%)
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P FN L+ A K + +D + S+ E M++L TYN +I F
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
+M G + T L+NGY + ++ V ++ + + +I
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ E + RM ++ C+P+ T+ ++ K G D + L
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 172
>gi|302762967|ref|XP_002964905.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
gi|300167138|gb|EFJ33743.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
Length = 773
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 182/417 (43%), Gaps = 46/417 (11%)
Query: 115 FSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG 174
F + + W +AL++F+ ++ Q + +P E Y ++ ++G+ G E ++F +M E
Sbjct: 53 FREFAARSDWHRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDMPEND 112
Query: 175 IEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV-DAMRFEL 233
++ +TAL+ AY RN + + L +MK +P++ TY+T++ AC + +E
Sbjct: 113 VKWNVYAFTALINAYGRNGQYEASLHLLARMKK-EQVEPNLITYNTVLNACSKGGLDWEG 171
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK---------- 283
+ L+ M + P+ +T N +L G+ +Q V M ES
Sbjct: 172 LLNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVD 231
Query: 284 ------------------------PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
PD+ N+++ +A+ G V +++ + G P
Sbjct: 232 TFAGSNQLGRVEELLREMEDEGNPPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAP 291
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ T++ L+ YG + ++++ S+ M+ L P T +TYN++I+ F + G + F
Sbjct: 292 DVETYSTLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYFQESINLF 351
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNA---VISAC 436
M G+K D T+ L++ GL + + ++ + E+ A +IS+
Sbjct: 352 HDMVDSGVKPDDATYSALLSVCGRGGLTRE---AAKIHQHMLTNESTPSLEASAGLISSY 408
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM----NDKVYALEQEKLQ 489
K + Y R++E P + + + YAK G+ +YA+ + Q
Sbjct: 409 GKMAMYKDALVSYYRIREAGLDPQVSAYDALIQGYAKGGLYVEAGSTLYAMNKAGFQ 465
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 154/369 (41%), Gaps = 6/369 (1%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
NTV S L W L +F ++ + QP TY LL G E A VF
Sbjct: 156 NTVLNACSKGGL--DWEGLLNLFAQMRHEGI-QPDLITYNTLLSACSSRGLVEQAAMVFK 212
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
M E G+ Y +L+ + ++ + L +M+ N PD+ Y++LI+A DA
Sbjct: 213 TMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGN-PPDIAGYNSLIEAYADA 271
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
+++ M P+ T + +L YG G F+Q+ + S M + +T P V T
Sbjct: 272 GNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKDLST-PPTVAT 330
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
N+++ VF G + + G+ P+ T++ L+ G+ + + + + ++M
Sbjct: 331 YNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHML 390
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
+ + +I ++ M K ++ ++ G+ + LI GYA GL+
Sbjct: 391 TNESTPSLEASAGLISSYGKMAMYKDALVSYYRIREAGLDPQVSAYDALIQGYAKGGLYV 450
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH-CRPDSETFSIM 467
+ S++ +K VS N+V+ A K E + +++K D T +
Sbjct: 451 EAGSTLYAMNKAGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQKEGSEVDERTHETL 510
Query: 468 TEAYAKEGM 476
Y G+
Sbjct: 511 LGVYCDMGL 519
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 165/442 (37%), Gaps = 110/442 (24%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QA VF+ + E TY L+ S Q ++ EM +EG P Y +L
Sbjct: 206 QAAMVFKTMNESGVVADAV-TYKSLVDTFAGSNQLGRVEELLREMEDEGNPPDIAGYNSL 264
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ AY + A QM+ C PDV TYSTL++ + FE + +L+ DM + S
Sbjct: 265 IEAYADAGNVHGAAGVFKQMQR-GGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKDLS 323
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV--- 302
P T N ++ +G+ G F + + M++S KPD T + +LSV G
Sbjct: 324 TPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGV-KPDDATYSALLSVCGRGGLTREA 382
Query: 303 ---------------------------------DMMERWYEKFRNFGIDPETRTFNILIG 329
D + +Y + R G+DP+ ++ LI
Sbjct: 383 AKIHQHMLTNESTPSLEASAGLISSYGKMAMYKDALVSYY-RIREAGLDPQVSAYDALIQ 441
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG-DAKHMEYTFEQMHAEGMK 388
Y K +Y + S + M K F S+ N+V+EA+S +G + +E+ E EG +
Sbjct: 442 GYAKGGLYVEAGSTLYAMNKAGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQKEGSE 501
Query: 389 ADTKT-----------------------------------FCCLIN--------GYAN-- 403
D +T +C L++ YA
Sbjct: 502 VDERTHETLLGVYCDMGLLEEAKEEFVIIKETSKVPGARVYCLLLSLCVRRSKWDYATQL 561
Query: 404 ------AGLFHKVISSVRLAS-----------------KLQ-IAENVSFYNAVISACIKA 439
AG H+V+ + + KL+ + E++ FYNA++ +
Sbjct: 562 LDEMIAAGGLHQVVVGIVRGTYDADFSWQVVEYAFDGLKLRDMEESMDFYNALVELLVYC 621
Query: 440 DDLMEMERVYKRMKEKHCRPDS 461
+ RV ++ P++
Sbjct: 622 NQKARAARVLADAMQRGAFPEA 643
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 183/419 (43%), Gaps = 14/419 (3%)
Query: 82 PGYRSKRTPIKNLKK-----KLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLK- 135
PG + + +K L K K + +A + + S ++L + + +V E +K
Sbjct: 225 PGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKF 284
Query: 136 ----EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
+Q P ++ L+ L G+ + A EM G+ P +YT ++ +CR
Sbjct: 285 YKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCR 344
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
+ EA ++M L C PDV TY+TL+ R E L +M ER VTP+
Sbjct: 345 AGSMSEALRVRDEMVGL-GCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLC 403
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
T ++ GY + G F++ ++ +L +PDV N+++ KG + ++
Sbjct: 404 TFTTLIHGYCRDGNFEKALQLFDTLLHQRL-RPDVVAYNSLIDGMCRKGDLAKANELWDD 462
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM-RKLQFPWTSSTYNNVIEAFSDMG 370
I P T++ILI ++ +K ++ ++ M K P TYN++I+ + G
Sbjct: 463 MHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLP-NIMTYNSIIKGYCRSG 521
Query: 371 DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYN 430
+ K + ++M + + D TF LI+GY H + + K + + YN
Sbjct: 522 NVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYN 581
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+I+ + ++ E RV+K+M PD T+ + + G + + + L E +
Sbjct: 582 MIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMH 640
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 151/367 (41%), Gaps = 39/367 (10%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQ-PD 214
++G P LA + + ++ E ++ +YC++ D+A +++M+ C PD
Sbjct: 134 RAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEK--RCVFPD 191
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
V T++ LI A A + L M + + P VT N VL G K FD+ + V
Sbjct: 192 VVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFR 251
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
M + + PDV + N ++ F G+V+ ++Y++ + G+ P+ +F+ LIG + +
Sbjct: 252 AM-DQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTR 310
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKH-------------------- 374
D ++ + M+ L Y VI F G
Sbjct: 311 GKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTY 370
Query: 375 ---------------MEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
E +M G+ D TF LI+GY G F K +
Sbjct: 371 NTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLH 430
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
++ +V YN++I + DL + ++ M + P+ T+SI+ +++ ++G ++
Sbjct: 431 QRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEE 490
Query: 480 VYALEQE 486
+ E
Sbjct: 491 AFGFLDE 497
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 130/315 (41%), Gaps = 10/315 (3%)
Query: 164 RKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF----VTLNQMKTLPNCQPDVYTYS 219
R++ + ++ P P+++ L+ Y ++ EAF + L+ +P +
Sbjct: 72 REIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVP-----ASASN 126
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
L+ A A L E Y+ + N T NI++ Y K+ FD+ + V+S M E
Sbjct: 127 ALLAALSRAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEM-EK 185
Query: 280 ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
PDV T N ++ G VD + N G+ P TFN ++ K R +DK
Sbjct: 186 RCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDK 245
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
V M + ++N +I F +G+ + +++M G+ D +F CLI
Sbjct: 246 AKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIG 305
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
++ G + +R L + + Y VI +A + E RV M C P
Sbjct: 306 LFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLP 365
Query: 460 DSETFSIMTEAYAKE 474
D T++ + K+
Sbjct: 366 DVVTYNTLLNGLCKQ 380
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 75/174 (43%)
Query: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
T NI++ +Y K +DK +V+ M K T+N +I+A GD + M
Sbjct: 159 TLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
+G+K TF ++ G F K R + +A +V +N +I + ++
Sbjct: 219 ANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEV 278
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
E + YK M+++ PD +FS + ++ G D A +E + L G
Sbjct: 279 EEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDG 332
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 169/370 (45%), Gaps = 17/370 (4%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
+ W + + E + + ++P G + L+ GKS Q A K F+ M + PT
Sbjct: 61 RNWRSVILILEWILQGTMFKPDVGCFNMLIDAYGKSKQWREAEKTFHLMKDFQCLPTETS 120
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP---------DVYTYSTLIKACVDAMRFE 232
+ LLAAY R +++A ++MK N P + TY+T ++ + R
Sbjct: 121 FNVLLAAYSRGVQLEKAEKLFHEMKE-SNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLS 179
Query: 233 LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTI 292
E ++DM ++ + P T I++ YGKA D+ + + M A C P+++T +
Sbjct: 180 QAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSM-RKALCPPNLYTYTAL 238
Query: 293 LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF 352
++ A +G E + + ++ G P+ T+N L+ AY + V + M +
Sbjct: 239 MNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGV 298
Query: 353 PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVIS 412
+YN +I+AF G + ++ M G K K+ L++ YA AG KV
Sbjct: 299 RPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAG---KVTE 355
Query: 413 SVRLASKLQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+ RL +++ + + +N+++SA + + EME + + M +PD T + +
Sbjct: 356 AERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSVAKPDISTLNTLIN 415
Query: 470 AYAKEGMNDK 479
AYA+ G +K
Sbjct: 416 AYAQGGYIEK 425
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 155/331 (46%), Gaps = 9/331 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QA F +++Q P T+ ++ + GK+ + A +F M + P YTAL
Sbjct: 180 QAEDTFRDMQKQGIL-PAVNTFTIMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTAL 238
Query: 186 LAAYCRNS---LIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
+ A+ R +E F L + +P DVYTY+ L++A + ++Q M
Sbjct: 239 MNAHAREGNCVRAEEIFAELQSVGFIP----DVYTYNALLEAYSRGEHPTGAKEVFQAMV 294
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
E V P+ V+ NI++ +G+AG+ + V M E A KP + + +LS +A G+V
Sbjct: 295 EAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKE-AGFKPTMKSHMLLLSSYAKAGKV 353
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
ER + N G+ P+T FN L+ AYG D+M S++E M ST N +
Sbjct: 354 TEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSVAKPDISTLNTL 413
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I A++ G + E F + ++G+ D ++ L+ YA LF K +S + K
Sbjct: 414 INAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSLMGAYAQRKLFRKCVSIFQKMVKAGC 473
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMK 453
+ + +S+C + + E+ + +R +
Sbjct: 474 IPDRATAKVFLSSCRSPEQVKEVTDMIERHR 504
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 136/328 (41%), Gaps = 14/328 (4%)
Query: 145 GTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQ 204
TY L +LGKSG+ A F +M ++GI P +T ++ Y + D+A
Sbjct: 163 ATYNTYLEVLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRS 222
Query: 205 MKTLPNCQPDVYTYSTLIKA------CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
M+ C P++YTY+ L+ A CV A E ++ ++ P+ T N +L
Sbjct: 223 MRK-ALCPPNLYTYTALMNAHAREGNCVRA------EEIFAELQSVGFIPDVYTYNALLE 275
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
Y + + V M+E A +PD + N ++ F G + Y+ + G
Sbjct: 276 AYSRGEHPTGAKEVFQAMVE-AGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFK 334
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P ++ +L+ +Y K + ++ + + +N+++ A+ + G ME
Sbjct: 335 PTMKSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESL 394
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
E M + K D T LIN YA G K + +V + +++ A +
Sbjct: 395 LESMVSSVAKPDISTLNTLINAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSLMGAYAQ 454
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ ++++M + C PD T +
Sbjct: 455 RKLFRKCVSIFQKMVKAGCIPDRATAKV 482
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 164/381 (43%), Gaps = 35/381 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR---------- 191
P TY ++ L G+ A V +EM G P P +Y +L A CR
Sbjct: 157 PNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRV 216
Query: 192 --------------------NSLIDEAFV--TLNQMKTLPN--CQPDVYTYSTLIKACVD 227
N++ D+ V L+ ++ LP+ C+PDV +Y+ ++K
Sbjct: 217 LEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCM 276
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
A R+ ++ L ++M + PN VT N ++ + G+F+++ VL+ M+E C PD+
Sbjct: 277 AKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHG-CTPDIR 335
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
TI+ +G +++ + ++G+ P +N L+ +++ ++ M
Sbjct: 336 MYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEM 395
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
P T+N +++ F G + EQM G D T+ +ING+ GL
Sbjct: 396 FDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLI 455
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ + ++ + N Y V+ A+ ++ E + +M ++ C + TF+ +
Sbjct: 456 DEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTL 515
Query: 468 TEAYAKEGMNDKVYALEQEKL 488
K+G+ ++ L ++ L
Sbjct: 516 INFLCKKGLVEQAIELLKQML 536
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 163/391 (41%), Gaps = 38/391 (9%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
+ K+W ++ E + P T+ L+ L ++G E +V +MVE G P
Sbjct: 276 MAKRWGCVQELMEEMVRMAC-PPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDI 334
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+Y ++ C+ ++ A LN+M + +P+V Y+TL+K A R+E E L
Sbjct: 335 RMYATIIDGICKEGHLEVAHEILNRMPSY-GLKPNVVCYNTLLKGLCSAERWEETEELLA 393
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
+M ++ + VT NI++ + + G+ D++ +L MLE C PDV T T+++ F +
Sbjct: 394 EMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG-CMPDVITYTTVINGFCKE 452
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G +D + G P T ++ I++ + +M M + P T+
Sbjct: 453 GLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITF 512
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-------------- 405
N +I G + +QM G D ++ +I+G AG
Sbjct: 513 NTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVN 572
Query: 406 --------LFHKVISSV----RLASKLQIAENVS---------FYNAVISACIKADDLME 444
++ + S++ R+ +Q+ +N+ YNAVIS+ K +
Sbjct: 573 KGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETER 632
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
M C P+ T++I+ A EG
Sbjct: 633 AIEFLAYMVSSGCVPNESTYTILIRGLASEG 663
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 136/311 (43%), Gaps = 11/311 (3%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y A++A YCR ++ A ++ P+ YTY +++A R + +M
Sbjct: 130 YNAMVAGYCRAGQLESA----RRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEM 185
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
R P +++L + G F RVL L + C DV N +L+ ++G
Sbjct: 186 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLED-LHARGCALDVGNCNLVLNAICDQGS 244
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
VD +FG +P+ ++N ++ + + + +ME M ++ P T+N
Sbjct: 245 VDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNT 304
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG---LFHKVISSVRLAS 418
+I G + + QM G D + + +I+G G + H++++ R+ S
Sbjct: 305 LISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILN--RMPS 362
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ NV YN ++ A+ E E + M +K C D TF+I+ + + + G+ D
Sbjct: 363 -YGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVD 421
Query: 479 KVYALEQEKLQ 489
+V L ++ L+
Sbjct: 422 RVIELLEQMLE 432
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 116/276 (42%), Gaps = 37/276 (13%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
T+ L+ ++G + ++ +M+E G P YT ++ +C+ LIDEA + L M
Sbjct: 406 TFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 465
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
T C+P+ +Y+ ++K A R+ E L M ++ N +T N ++ K G+
Sbjct: 466 -TACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGL 524
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTIL-------------------------------- 293
+Q +L ML + C PD+ + +T++
Sbjct: 525 VEQAIELLKQMLVNG-CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYS 583
Query: 294 ---SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
S + +G+++ + + ++ ++ I + +N +I + K+ ++ + YM
Sbjct: 584 SIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSS 643
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
STY +I + G K + ++ ++G
Sbjct: 644 GCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 679
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 150/331 (45%), Gaps = 2/331 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY ++ L K G A +F+EM+ GI P +Y++L+ CR + EA +M
Sbjct: 148 TYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEM 207
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ DVYTY++LI A ++ + M +R +P+ T I++ G K G
Sbjct: 208 EG-RGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGK 266
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+ +++L M +PD+ T NT+++ GQ++ + +E + GI ++N
Sbjct: 267 VGEAQQILELMHHKGK-EPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYN 325
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
ILI Y K + D+ + E MR ++ TYN +I A G + + F +M
Sbjct: 326 ILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTC 385
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G T+C L++G G + I + K + N+ ++ ++ +A L E
Sbjct: 386 GQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEA 445
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ + + + PD+ ++I+ +GM
Sbjct: 446 WKQFDEISKNGLEPDTIAYNILINGLCNKGM 476
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 119/275 (43%), Gaps = 6/275 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A Q+ E++ + +P TY L+ L GQ E A K+F + + GI+ Y L
Sbjct: 269 EAQQILELMHHKG-KEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNIL 327
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ YC++ IDEAF +M+ +P TY+TLI A + R + L+ +M
Sbjct: 328 INGYCKDQKIDEAFRLFEEMRP-KGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCG 386
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
T ++L G K G ++ + + ++ KP++ + +L G+++
Sbjct: 387 QFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEH-KPNIEVFSILLDGMCRAGKLEEA 445
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ +++ G++P+T +NILI K M + ++ M + S T+N +I+
Sbjct: 446 WKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQN 505
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKAD---TKTFCCL 397
+ E+M D T CL
Sbjct: 506 LLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCL 540
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/345 (18%), Positives = 141/345 (40%), Gaps = 45/345 (13%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
WF L V + P T+ L+ L K G+ A+++ M +G EP Y
Sbjct: 237 WFLNLMV------DRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYN 290
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
L+ C L+ DA + L++ + +
Sbjct: 291 TLMNGLC------------------------------LVGQLEDATK------LFESLAD 314
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
R + N + NI++ GY K D+ R+ M KP T NT++ G+V
Sbjct: 315 RGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGL-KPSTVTYNTLIGALCQSGRVR 373
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
++ + + + G + T+ +L+ K ++ + + ++K + ++ ++
Sbjct: 374 TAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILL 433
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV-RLASKLQI 422
+ G + F+++ G++ DT + LING N G+ + + + ++ K +
Sbjct: 434 DGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCL 493
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
++++F N +I +K +++ E ++ + M+ ++ PD S++
Sbjct: 494 PDSITF-NVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSML 537
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 149/311 (47%), Gaps = 4/311 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSG-QPELARKVFNEMVEEGIEPTPELYTA 184
+A+ VF +KE +P TY ++ GK G + + K F+EM ++P + +
Sbjct: 286 EAISVFNSMKEYGL-RPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNS 344
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
LLA R L + A ++M + DV++Y+TL+ A + +L + M +
Sbjct: 345 LLAVCSRGGLWEAARNLFDEMSN-RRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAK 403
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ PN V+ + V+ G+ KAG FD+ + G + D + NT+LS++ G+ +
Sbjct: 404 RIMPNVVSYSTVIDGFAKAGRFDEALNLF-GEMRYLNIALDRVSYNTLLSIYTKVGRSEE 462
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ + GI + T+N L+G YGK+ YD++ V M++ TY+ +I+
Sbjct: 463 ALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLID 522
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
+S G K F + + G++AD + LI+ GL +S + +K I+
Sbjct: 523 GYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISP 582
Query: 425 NVSFYNAVISA 435
NV YN++I A
Sbjct: 583 NVVTYNSIIDA 593
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 153/338 (45%), Gaps = 3/338 (0%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
++ LG+ G+ +A+++F G T ++AL++AY R+ L +EA N MK
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEY- 297
Query: 210 NCQPDVYTYSTLIKACV-DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
+P++ TY+ +I AC M F+ + + +M V P+ +T N +L + G+++
Sbjct: 298 GLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEA 357
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
+ M + + DV++ NT+L GQ+D+ + I P +++ +I
Sbjct: 358 ARNLFDEM-SNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVI 416
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
+ K +D+ ++ MR L +YN ++ ++ +G ++ +M + G+K
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
D T+ L+ GY G + +V + + N+ Y+ +I K E V
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEV 536
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
++ K R D +S + +A K G+ +L E
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDE 574
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 90/198 (45%), Gaps = 1/198 (0%)
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
+ ++S G+V + +R +E + G F+ LI AYG+ ++++ SV M++
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 350 LQFPWTSSTYNNVIEAFSDMG-DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
TYN VI+A G + K + F++M ++ D TF L+ + GL+
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWE 356
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ S +I ++V YN ++ A K + + +M K P+ ++S +
Sbjct: 357 AARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVI 416
Query: 469 EAYAKEGMNDKVYALEQE 486
+ +AK G D+ L E
Sbjct: 417 DGFAKAGRFDEALNLFGE 434
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 161/351 (45%), Gaps = 8/351 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY + L K+G+ + ++ EM GI P + ++++ C+ + ID+AF
Sbjct: 185 PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQV 244
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD--ERSVTPNTVTQNIVLGG 259
M C PD TYS ++ A R + ++ + + M + T N +G
Sbjct: 245 FKGMLE-RGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGA 303
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI-D 318
++G F + +L GM+ES + P++ + N ++ G VD + K + G
Sbjct: 304 LCRSGKFPLAKNILLGMIESGS-LPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCK 362
Query: 319 PETRTFNILIGAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P+ FN LI + K R+ ++E K TYN +I+ S G K +
Sbjct: 363 PDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKL 422
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
++M A G K + T+ LINGYA G++ + S S ++ YN V+SA
Sbjct: 423 LLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFS 482
Query: 438 KADDLMEMERVYKRMKEK--HCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
KA + + E VY+++K K +C PD+ T+ I+ + Y + ++ L QE
Sbjct: 483 KAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQE 533
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 174/399 (43%), Gaps = 44/399 (11%)
Query: 131 FEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAA 188
EML+E + P T+ ++ L K+ + + A +VF M+E G P Y+ +L
Sbjct: 207 LEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDN 266
Query: 189 YCRNSLIDEAFVTLNQMKTL-PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVT 247
R + +D L M+ + C +VYT++ I A + +F L + + M E
Sbjct: 267 LSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSL 326
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ------ 301
PN ++ N V+ G K+G D ++ ML+S CKPDV NT++S F G+
Sbjct: 327 PNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQ 386
Query: 302 ---------------------VDMMERW---------YEKFRNFGIDPETRTFNILIGAY 331
+D ++ ++ + G P T+ LI Y
Sbjct: 387 LLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGY 446
Query: 332 GKKRMYDKMSSVMEYMR-KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG--MK 388
K MY++ S+ + M K FP TYN V+ AFS G E ++Q+ +
Sbjct: 447 AKHGMYEEAESLFDEMSAKGCFP-DIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCS 505
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL-MEMER 447
D T+ LI+GY A + ++ ++ + + + YN +I+ + +++ +
Sbjct: 506 PDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALA 565
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
VY++M ++ C P + F+ + + + G + ++ QE
Sbjct: 566 VYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQE 604
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 152/387 (39%), Gaps = 64/387 (16%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y TY L+ L KSG + A+ + +M + G P YTAL+ C+ +A
Sbjct: 6 YDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAI 65
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
T+ +M C+PD+ TY++LI A R + + Q++ PN +T + ++
Sbjct: 66 QTVKRMLR-SGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIW 124
Query: 260 YGKAGMFDQM-----ERVLSG--------------------------------MLESATC 282
+ DQ E +L G M+ES
Sbjct: 125 NCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGR- 183
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
PDV T NT +S G++D E+ GI P+ TF +I K D
Sbjct: 184 IPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQ 243
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
V + M + S TY+ +++ S ++ E M A MKA C++ Y
Sbjct: 244 VFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQA--MKAG-----CVMEVYT 296
Query: 403 NAGLFHKVISSVRLASKLQIAENVSF-------------YNAVISACIKADDLMEMERVY 449
+ + I ++ + K +A+N+ YN VI K+ ++ + ++
Sbjct: 297 H----NAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLS 352
Query: 450 KRMKEKH-CRPDSETFSIMTEAYAKEG 475
++M + C+PD F+ + + K G
Sbjct: 353 RKMLDSGCCKPDVIFFNTLISGFCKAG 379
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 116/268 (43%), Gaps = 3/268 (1%)
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
V TY+TLI + + + L Q M + PN VT ++ G KA + +
Sbjct: 10 VVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVK 69
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
ML S C+PD+ T N+++ ++D ++ G P T++ L+ ++
Sbjct: 70 RMLRSG-CEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRR 128
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD--MGDAKHMEYTFEQMHAEGMKADTK 392
R D+ ++ M Y + I F + +++ ++M G D
Sbjct: 129 RRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVV 188
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
T+ I+G AG K + + + I +V + ++IS KA+ + + +V+K M
Sbjct: 189 TYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGM 248
Query: 453 KEKHCRPDSETFSIMTEAYAKEGMNDKV 480
E+ C PDS T+SIM + ++ D V
Sbjct: 249 LERGCVPDSLTYSIMLDNLSRANRLDTV 276
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 121/289 (41%), Gaps = 33/289 (11%)
Query: 67 LWKEGEYP-------GVSET-SIPGYRSKRTPIKNLKK--------KLERKAKAKA---- 106
L + G++P G+ E+ S+P S I L K KL RK
Sbjct: 304 LCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKP 363
Query: 107 ---WVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELA 163
+ NT+ F + QA Q+ +K + P TY L+ K G + A
Sbjct: 364 DVIFFNTLISGFCK---AGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQA 420
Query: 164 RKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIK 223
+ + EM G +P Y AL+ Y ++ + +EA ++M C PD+ TY+T++
Sbjct: 421 KLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSA-KGCFPDIITYNTVLS 479
Query: 224 ACVDAMRFELIETLYQDMDERS--VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA- 280
A A E +YQ + ++ +P+ +T I++ GY +A +Q +L M
Sbjct: 480 AFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGW 539
Query: 281 TCKPDVWTMNTILSVFANKGQV-DMMERWYEKFRNFGIDPETRTFNILI 328
+C D +T N +++ A +V Y++ + P FN L+
Sbjct: 540 SC--DSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLV 586
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 145/334 (43%), Gaps = 6/334 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L KS + A + +M+E G P Y L+ +C+ +DEA V
Sbjct: 234 PSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVL 293
Query: 202 LNQMKTLPN-CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
NQM L N C PDV+TY+ LI R + L Q+M + PN +T N ++
Sbjct: 294 FNQM--LENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSL 351
Query: 261 GKAGMF-DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K+G + D L+ M+ CKP +T N ++ +F GQ+D+ ++ + G P
Sbjct: 352 VKSGKYIDAFN--LAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLP 409
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ T+NI+I + D ++E M + P TYN+++ +
Sbjct: 410 DIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVY 469
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
E + G D T LI+G + +R + A +V Y +I KA
Sbjct: 470 EVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKA 529
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
D L + + M +K C P T+SI+ + K
Sbjct: 530 DQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCK 563
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 172/418 (41%), Gaps = 29/418 (6%)
Query: 79 TSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQP 138
T PGY+ + L RK KA+ + F +H
Sbjct: 123 TGQPGYKHSKFTCNCLLSAFVRKKKAQE----AYDLFKNH-----------------RCG 161
Query: 139 FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA 198
P TY L+ K+ + A ++ +EM + GI P +Y ++ C N +D A
Sbjct: 162 LCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSA 221
Query: 199 FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
V M+ NC P V TY+ L+ A + R + +DM E PN VT N ++
Sbjct: 222 LVHYRDMQR--NCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLIN 279
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
G+ K G D+ + + MLE+ +C PDV+T N ++ + + + + ++ +G +
Sbjct: 280 GFCKLGNMDEAVVLFNQMLEN-SCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCE 338
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P T+N L+ + K Y ++ + M + + T+N +I+ F +G
Sbjct: 339 PNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYEL 398
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
F+ M G D T+ +I+G A + ++ +V YN+++S K
Sbjct: 399 FQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCK 458
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
A + E VY+ ++ D T S + + K D + EKL +E +G
Sbjct: 459 ASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLD-----DAEKLLREMERNG 511
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 163/396 (41%), Gaps = 40/396 (10%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ +F + E P TY L+ K +P+ K+ EMV+ G EP Y L
Sbjct: 289 EAVVLFNQMLENSC-SPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTL 347
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + ++ +AF L QM +C+P +T++ +I + +L L+Q M +R
Sbjct: 348 MDSLVKSGKYIDAF-NLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRG 406
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ T NI++ G +A D ++L M E A C PDV T N+I+S QVD
Sbjct: 407 CLPDIYTYNIMISGACRANRIDDARQLLERMTE-AGCPPDVVTYNSIVSGLCKASQVDEA 465
Query: 306 ERWYEKFRNFG-----------ID------------------------PETRTFNILIGA 330
YE RN G ID P+ + ILI
Sbjct: 466 YEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHG 525
Query: 331 YGKKRMYDK-MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+ K DK ++ E + K P T TY+ VI+ + + M G+
Sbjct: 526 FCKADQLDKSLAFFSEMLDKGCVP-TVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTP 584
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
D + +I+G + + + +L + A V YN ++ K L E +
Sbjct: 585 DAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLL 644
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
+ M+ C PD+ T++ + + + K +DK + L Q
Sbjct: 645 EVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQ 680
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 5/260 (1%)
Query: 91 IKNLKKKLERKAKAKAWVNTVA--ETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYM 148
I + ++ LER +A + V S Q +A +V+E+L+ ++ T
Sbjct: 427 IDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVV-TCS 485
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
L+ L KS + + A K+ EM G P YT L+ +C+ +D++ ++M
Sbjct: 486 TLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLD- 544
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
C P V TYS +I + R L + M ER VTP+ + V+ G K+ +D+
Sbjct: 545 KGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDE 604
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
L +++ C P V T N ++ ++D E + G P+T T+N +
Sbjct: 605 AYE-LYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVF 663
Query: 329 GAYGKKRMYDKMSSVMEYMR 348
+ K +DK + + M+
Sbjct: 664 DGFWKSAEHDKAFRLFQAMK 683
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 108/239 (45%), Gaps = 13/239 (5%)
Query: 92 KNLKKKLERKAKAKAWVNTVAETFSDHVLKK--QWFQALQVF-EMLKEQPFYQPKEGTYM 148
+ L +++ER A + VA T H K Q ++L F EML + P TY
Sbjct: 501 EKLLREMERNGSAP---DVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCV--PTVITYS 555
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
++ L KS + + M+E G+ P +YT+++ C++ DEA+ MK
Sbjct: 556 IVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQ- 614
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
C P V TY+ L+ R + L + M+ P+TVT N V G+ K+ D+
Sbjct: 615 TGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDK 674
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM-MERWYEKFR-NFGIDPE-TRTF 324
R+ M +S C P + + +L+ + ++D ME W E +DPE +RT
Sbjct: 675 AFRLFQAM-KSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEISRTL 732
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 165/348 (47%), Gaps = 17/348 (4%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL L K G+ E A +V +VE G+ P +Y ++ YC+ +D A +T+ QM++
Sbjct: 248 LLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMES-R 306
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+P+ ++++I + + E + M + + P+ T NI++ GYG+ +F +
Sbjct: 307 GLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRC 366
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
++L M E+ KP+V + ++++ G++ E G+ P +N+LI
Sbjct: 367 FQILEEMEENGE-KPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLID 425
Query: 330 A---YGKKR----MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
GK R +D+MS K T TYN++I+ MG K E F +
Sbjct: 426 GSCTVGKLREALRFFDEMS-------KNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLI 478
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
+ G D T+ LI+GY+NAG K + KL + ++ ++ +IS C K + +
Sbjct: 479 TSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSK-EGI 537
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
E ++ M + + PD ++ M Y + G K ++L++E + M
Sbjct: 538 KLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDM 585
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 147/353 (41%), Gaps = 10/353 (2%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A+++FE +K + P Y L+ L K + A K+F EM + P + L+
Sbjct: 85 AMELFETMKRRKVV-PNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLI 143
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
YC+ +D A +MK +P + T+++L+ A R E + ++
Sbjct: 144 DGYCKAGEVDVAIGLRERMKK-EKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGF 202
Query: 247 TPNTVTQNIVLGGYGK----AGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
P+ T +I+ G K AG + R G K D +T + +L+ +G+V
Sbjct: 203 VPDGFTYSIIFDGLLKSDDGAGAALDLYREAIG----KGVKIDNYTCSILLNGLCKEGKV 258
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ E + G+ P +N ++ Y + D+ +E M +N+V
Sbjct: 259 EKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSV 318
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I+ F +M E ++M +G+ +T+ LI+GY +F + + +
Sbjct: 319 IDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGE 378
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
NV Y ++I+ K ++E E V + M + P++ ++++ + G
Sbjct: 379 KPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVG 431
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 138/332 (41%), Gaps = 5/332 (1%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL + +S ++++ M +EG P+ ++ + + D +M L
Sbjct: 2 LLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL- 60
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+PD Y + A V +L L++ M R V PN N+++GG K
Sbjct: 61 GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA 120
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
E+ L G + P+ T NT++ + G+VD+ E+ + ++P TFN L+
Sbjct: 121 EK-LFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLS 179
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF--SDMGDAKHMEYTFEQMHAEGM 387
K R ++ ++ ++ F TY+ + + SD G ++ + + +G+
Sbjct: 180 GLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDL-YREAIGKGV 238
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
K D T L+NG G K ++ + + YN +++ + D+
Sbjct: 239 KIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAIL 298
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
++M+ + RP+ F+ + + + + M DK
Sbjct: 299 TIEQMESRGLRPNCIAFNSVIDKFCEMQMIDK 330
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 125/300 (41%), Gaps = 48/300 (16%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
N + + + + + FQ L+ EM E+ +P +Y L+ L K G+ A V
Sbjct: 351 NILIDGYGRLCVFSRCFQILE--EM--EENGEKPNVISYGSLINCLCKDGKILEAEMVLR 406
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
+MV G+ P +Y L+ C T+ +++ +A
Sbjct: 407 DMVGRGVLPNANIYNMLIDGSC----------TVGKLR--------------------EA 436
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
+RF + +M + + VT N ++ G K G + E + + + C PDV T
Sbjct: 437 LRF------FDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHC-PDVIT 489
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
N+++S ++N G YE + G+ P TF+ LI K+ + K ++ M
Sbjct: 490 YNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLK-ETLFNEML 548
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF---EQMHAEGMKADTKTFCCLINGYANAG 405
++ YN +I + + G H++ F ++M G++ D KT+ LI G+ G
Sbjct: 549 QMNLSPDRVVYNAMIHCYQETG---HVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEG 605
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 119/270 (44%), Gaps = 18/270 (6%)
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
G+ A + F+EM + GI T Y +L+ C+ + EA + + +C PDV T
Sbjct: 431 GKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHC-PDVIT 489
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y++LI +A + LY+ M + + P T + ++ G K G+ +++ L +
Sbjct: 490 YNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGI--KLKETLFNEM 547
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
PD N ++ + G V ++ + G+ P+ +T+N LI + K+
Sbjct: 548 LQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKL 607
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
+ +++ M+ + TY+ +I+ D+ D + +M L
Sbjct: 608 SETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREM--------------L 653
Query: 398 INGYA-NAGLFHKVISSVRLASKLQIAENV 426
NG+ N + +++ + +R +LQ A+++
Sbjct: 654 ENGFLPNVCICNELSTGLRKDGRLQEAQSI 683
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 3/149 (2%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
EML Q P Y ++ ++G + A + EMV+ G+ P + Y +L+ + +
Sbjct: 546 EML--QMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLK 603
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
+ E ++ MK P+ TYS LI+ D F Y++M E PN
Sbjct: 604 EGKLSETKDLVDDMKA-KGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVC 662
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESA 280
N + G K G + + + S M+ +
Sbjct: 663 ICNELSTGLRKDGRLQEAQSICSEMIANG 691
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 72/167 (43%), Gaps = 14/167 (8%)
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
+L+ + +M+ ++S + ++MR+ + ++E+ + ++ F++M
Sbjct: 1 MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKL-------QIAENVSFYNAVISACIK 438
G + D Y A L + ++LA +L ++ NV YN +I K
Sbjct: 61 GFRPDKLV-------YGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCK 113
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
+ + E+++ M ++ P+ TF+ + + Y K G D L +
Sbjct: 114 EKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRE 160
>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 1429
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 172/374 (45%), Gaps = 12/374 (3%)
Query: 119 VLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPT 178
V ++ W +AL+VFE L + ++ P +L +LG+ Q LA ++F E +
Sbjct: 166 VGQESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTR-AEPTVGDR 224
Query: 179 PELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA--MRFELIET 236
++Y A++ Y R+ +A ++ M+ C PD+ +++TLI A + + + L
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQ-RGCVPDLISFNTLINARLKSGGLTPNLAVE 283
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
L + + P+ +T N +L + D +V M E+ C+PD+WT N ++SV+
Sbjct: 284 LLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDM-EAHRCQPDLWTYNAMISVY 342
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
G ER + + G P+ T+N L+ A+ ++R +K+ V + M+K+ F
Sbjct: 343 GRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDE 402
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHA-EGMKADTKTFCCLINGYANAGLFHKVISSVR 415
TYN +I + G ++ M G D T+ LI+ A ++ + +
Sbjct: 403 MTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKA---NRTVEAAA 459
Query: 416 LASKL---QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
L S++ I + Y+A+I KA E E + M +PD+ +S+M +
Sbjct: 460 LMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLL 519
Query: 473 KEGMNDKVYALEQE 486
+ K + L ++
Sbjct: 520 RGNETRKAWGLYRD 533
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 155/353 (43%), Gaps = 3/353 (0%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+K W +A V L+ Q P T+ L+ + G E AR +FN M+ +G PT E
Sbjct: 765 QKLWQKAESVVGNLR-QSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVE 823
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
LL A C + ++E +V + +++ + + + ++ A A ++ +Y
Sbjct: 824 SINILLHALCVDGRLEELYVVVEELQDM-GFKISKSSILLMLDAFARAGNIFEVKKIYSS 882
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M P +++ K E ++S M E A K ++ N++L ++
Sbjct: 883 MKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEM-EEANFKVELAIWNSMLKMYTAIE 941
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+ Y++ + G++P+ T+N LI Y + R ++ +M+ MR L TY
Sbjct: 942 DYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYK 1001
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
++I AF + E FE++ ++G+K D + ++ ++G K +++
Sbjct: 1002 SLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNA 1061
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
I ++ + ++ + + + E E+V +K+ + +S + +AY +
Sbjct: 1062 GIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLR 1114
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/337 (18%), Positives = 141/337 (41%), Gaps = 48/337 (14%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP---NCQPDVYTYS 219
A +VF+++ G E + + +++ YC+ + A +NQ +T C P
Sbjct: 700 ASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSP------ 753
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
+Y D+ E YGK ++ + E V+ + +S
Sbjct: 754 -----------------MYTDIIE---------------AYGKQKLWQKAESVVGNLRQS 781
Query: 280 ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
PD+ T N+++S +A G + + G P + NIL+ A ++
Sbjct: 782 GR-TPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEE 840
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+ V+E ++ + F + S+ +++AF+ G+ ++ + M A G + + +I
Sbjct: 841 LYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIE 900
Query: 400 GYANAGLFHKVISSVRLASKLQIAE---NVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
+V + + S+++ A ++ +N+++ +D + +VY+R+KE
Sbjct: 901 LLCKG---KRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETG 957
Query: 457 CRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
PD T++ + Y ++ ++ Y L Q+ + L+
Sbjct: 958 LEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD 994
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 6/223 (2%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
ALQ+++ +K P TY L+ LGK+ + A + +EM++ GI+PT + Y+AL+
Sbjct: 421 ALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALI 480
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
Y + +EA T + M +PD YS ++ + LY+DM
Sbjct: 481 CGYAKAGKREEAEDTFSCM-LRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGH 539
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
TP+ +++ G K D +++ + M E P I SV D+
Sbjct: 540 TPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNP-----LEISSVLVKGECFDLAA 594
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
R + G + E T ++G+Y + + ++E++++
Sbjct: 595 RQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKE 637
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 80/212 (37%), Gaps = 37/212 (17%)
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
T V N ++ V++ G+ + + R G P+ +FN LI A K
Sbjct: 220 TVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPN 279
Query: 341 SSV--MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+V ++ +R + TYN ++ A S + FE M A + D T+ +I
Sbjct: 280 LAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMI 339
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
+ Y GL E ER++ ++ K
Sbjct: 340 SVYGRCGL-----------------------------------AAEAERLFMELELKGFF 364
Query: 459 PDSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
PD+ T++ + A+A+E +KV + Q+ +M
Sbjct: 365 PDAVTYNSLLYAFARERNTEKVKEVYQQMQKM 396
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 165/353 (46%), Gaps = 9/353 (2%)
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
+ +K Q +P TY L+ + K G+ E A K+F EMV++G+ P+ +Y L+ +
Sbjct: 278 ILTTMKRQKI-EPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGF 336
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
C +D A ++M P + TY++LI A R + E + +++ E+ ++P+
Sbjct: 337 CNKGNLDMASAYKDEMLK-KGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPD 395
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
+T NI++ GY + + + ML S KP T ++L V + K ++ + +
Sbjct: 396 AITYNILINGYCRCANAKKAFLLHDEMLASGI-KPTKKTYTSLLHVLSKKNRMKEADDLF 454
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
+K + G+ P+ FN LI + +++ M +++ P T+N +++
Sbjct: 455 KKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCRE 514
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL---QIAENV 426
G + F++M G+K D +F LI+GY+ G + + R+ +++ V
Sbjct: 515 GKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRG---DIKDAFRVRNEMLDTGFNPTV 571
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
YNA++ K + E + K M K PD T+ + E AK + D+
Sbjct: 572 LTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 157/365 (43%), Gaps = 7/365 (1%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
W ++F + + Y T+ ++ +L K G+ + A+ M G++P Y
Sbjct: 206 WVLYAEMFRLRIKSSVY-----TFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYN 260
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
++ YC + ++ A L MK +PD +TY +LI R E ++++M +
Sbjct: 261 TIVHGYCSSGRVEAADAILTTMKR-QKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQ 319
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+ + P+ V N ++ G+ G D ML+ P + T N+++ + + D
Sbjct: 320 KGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGI-SPTMSTYNSLIHALFMEQRTD 378
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
E ++ + GI P+ T+NILI Y + K + + M T TY +++
Sbjct: 379 EAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLL 438
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
S K + F+++ +EG+ D F LI+G+ + ++ ++++
Sbjct: 439 HVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVP 498
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ +N ++ + + E ++ MK + +PD +F+ + Y++ G + +
Sbjct: 499 PDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRV 558
Query: 484 EQEKL 488
E L
Sbjct: 559 RNEML 563
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 156/350 (44%), Gaps = 3/350 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A + F +KE+ P T LL L K + E A ++ EM I+ + + +
Sbjct: 169 EAFECFYTMKEKGVL-PTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIM 227
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ + +A + M+T +P++ TY+T++ + R E + + M +
Sbjct: 228 INVLCKEGKLKKAKDFVGHMET-SGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK 286
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P++ T ++ G K G ++ ++ M++ +P NT++ F NKG +DM
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGL-RPSAVIYNTLIDGFCNKGNLDMA 345
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ ++ GI P T+N LI A ++ D+ +++ +++ + TYN +I
Sbjct: 346 SAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILING 405
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ +AK ++M A G+K KT+ L++ + + + + + +
Sbjct: 406 YCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPD 465
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
V +NA+I ++ + K M PD TF+ + + + +EG
Sbjct: 466 VIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREG 515
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 120/279 (43%), Gaps = 13/279 (4%)
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER--- 271
V+ Y LIK+C D R + + M E+ V P T N +L +F ++ R
Sbjct: 153 VFDY--LIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLL------SLFLKLNRTEA 204
Query: 272 --VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
VL + K V+T N +++V +G++ + + G+ P T+N ++
Sbjct: 205 AWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVH 264
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
Y + +++ M++ + S TY ++I G + FE+M +G++
Sbjct: 265 GYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRP 324
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
+ LI+G+ N G + K I+ +S YN++I A E E +
Sbjct: 325 SAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMI 384
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
K ++EK PD+ T++I+ Y + K + L E L
Sbjct: 385 KEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEML 423
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 81/191 (42%), Gaps = 6/191 (3%)
Query: 305 MERWYEKFRNF------GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
M R E F F G+ P T N L+ + K + + M +L+ + T
Sbjct: 164 MNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYT 223
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
+N +I G K + M G+K + T+ +++GY ++G + +
Sbjct: 224 FNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMK 283
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ +I + Y ++IS K L E ++++ M +K RP + ++ + + + +G D
Sbjct: 284 RQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLD 343
Query: 479 KVYALEQEKLQ 489
A + E L+
Sbjct: 344 MASAYKDEMLK 354
>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g18110, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1440
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 172/374 (45%), Gaps = 12/374 (3%)
Query: 119 VLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPT 178
V ++ W +AL+VFE L + ++ P +L +LG+ Q LA ++F E +
Sbjct: 166 VGQESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTR-AEPTVGDR 224
Query: 179 PELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA--MRFELIET 236
++Y A++ Y R+ +A ++ M+ C PD+ +++TLI A + + + L
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQ-RGCVPDLISFNTLINARLKSGGLTPNLAVE 283
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
L + + P+ +T N +L + D +V M E+ C+PD+WT N ++SV+
Sbjct: 284 LLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDM-EAHRCQPDLWTYNAMISVY 342
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
G ER + + G P+ T+N L+ A+ ++R +K+ V + M+K+ F
Sbjct: 343 GRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDE 402
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHA-EGMKADTKTFCCLINGYANAGLFHKVISSVR 415
TYN +I + G ++ M G D T+ LI+ A ++ + +
Sbjct: 403 MTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKA---NRTVEAAA 459
Query: 416 LASKL---QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
L S++ I + Y+A+I KA E E + M +PD+ +S+M +
Sbjct: 460 LMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLL 519
Query: 473 KEGMNDKVYALEQE 486
+ K + L ++
Sbjct: 520 RGNETRKAWGLYRD 533
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 155/353 (43%), Gaps = 3/353 (0%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+K W +A V L+ Q P T+ L+ + G E AR +FN M+ +G PT E
Sbjct: 765 QKLWQKAESVVGNLR-QSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVE 823
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
LL A C + ++E +V + +++ + + + ++ A A ++ +Y
Sbjct: 824 SINILLHALCVDGRLEELYVVVEELQDM-GFKISKSSILLMLDAFARAGNIFEVKKIYSS 882
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M P +++ K E ++S M E A K ++ N++L ++
Sbjct: 883 MKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEM-EEANFKVELAIWNSMLKMYTAIE 941
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+ Y++ + G++P+ T+N LI Y + R ++ +M+ MR L TY
Sbjct: 942 DYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYK 1001
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
++I AF + E FE++ ++G+K D + ++ ++G K +++
Sbjct: 1002 SLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNA 1061
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
I ++ + ++ + + + E E+V +K+ + +S + +AY +
Sbjct: 1062 GIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLR 1114
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/330 (19%), Positives = 138/330 (41%), Gaps = 48/330 (14%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP---NCQPDVYTYS 219
A +VF+++ G E + + +++ YC+ + A +NQ +T C P
Sbjct: 700 ASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSP------ 753
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
+Y D+ E YGK ++ + E V+ + +S
Sbjct: 754 -----------------MYTDIIE---------------AYGKQKLWQKAESVVGNLRQS 781
Query: 280 ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
PD+ T N+++S +A G + + G P + NIL+ A ++
Sbjct: 782 GR-TPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEE 840
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+ V+E ++ + F + S+ +++AF+ G+ ++ + M A G + + +I
Sbjct: 841 LYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIE 900
Query: 400 GYANAGLFHKVISSVRLASKLQIAE---NVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
+V + + S+++ A ++ +N+++ +D + +VY+R+KE
Sbjct: 901 LLCKG---KRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETG 957
Query: 457 CRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
PD T++ + Y ++ ++ Y L Q+
Sbjct: 958 LEPDETTYNTLIIMYCRDRRPEEGYLLMQQ 987
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 6/223 (2%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
ALQ+++ +K P TY L+ LGK+ + A + +EM++ GI+PT + Y+AL+
Sbjct: 421 ALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALI 480
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
Y + +EA T + M +PD YS ++ + LY+DM
Sbjct: 481 CGYAKAGKREEAEDTFSCM-LRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGH 539
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
TP+ +++ G K D +++ + M E P I SV D+
Sbjct: 540 TPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNP-----LEISSVLVKGECFDLAA 594
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
R + G + E T ++G+Y + + ++E++++
Sbjct: 595 RQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKE 637
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 80/212 (37%), Gaps = 37/212 (17%)
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
T V N ++ V++ G+ + + R G P+ +FN LI A K
Sbjct: 220 TVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPN 279
Query: 341 SSV--MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+V ++ +R + TYN ++ A S + FE M A + D T+ +I
Sbjct: 280 LAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMI 339
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
+ Y GL E ER++ ++ K
Sbjct: 340 SVYGRCGL-----------------------------------AAEAERLFMELELKGFF 364
Query: 459 PDSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
PD+ T++ + A+A+E +KV + Q+ +M
Sbjct: 365 PDAVTYNSLLYAFARERNTEKVKEVYQQMQKM 396
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 185/417 (44%), Gaps = 60/417 (14%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A +V +++E+ +P T+ ++ L K+G+ E ARKVF+EMV EG+ P Y LL
Sbjct: 206 AERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLL 265
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER-- 244
+ YC+ + E+ ++M T PDV T+++LI A A E L M ER
Sbjct: 266 SGYCKVGCLHESLAVFSEM-TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 324
Query: 245 ---------------------------------SVTPNTVTQNIVLGGYGKAGMFDQMER 271
+ P+ V N ++ GY K G D + R
Sbjct: 325 RMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD-LAR 383
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
L +E+ KPDV T +TI+S + G +D + +K G+ P+ T++ LI
Sbjct: 384 ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 443
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
+++ + + E M +L TY +I+ G+ + ++M +G+ D
Sbjct: 444 CEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDV 503
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKL----QIAENVSFYNAVISACIKAD------- 440
T+ LING + + + + RL KL + +N+ Y+A++ C KA+
Sbjct: 504 VTYSVLINGLSKSA---RTKEAHRLLFKLYHEDPVPDNIK-YDALMLCCSKAEFKSVVAL 559
Query: 441 -------DLM-EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
LM E ++VY+ M +++ + D +SI+ + + G K + ++ L+
Sbjct: 560 LKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLR 616
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 151/348 (43%), Gaps = 1/348 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L G+ E A V +M G P Y L+AA+CR +D A
Sbjct: 150 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 209
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
++ M+ N +P++ T+++++ A R E ++ +M + P+ V+ N +L GY
Sbjct: 210 VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC 269
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G + V S M + PDV T +++ G ++ + R G+
Sbjct: 270 KVGCLHESLAVFSEMTQRGLV-PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNE 328
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
TF LI + KK D +E MRK + YN +I + +G +
Sbjct: 329 VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIRE 388
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M A+ +K D T+ +I+GY G + K + + Y+++I +
Sbjct: 389 MEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKR 448
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
L + +++ M + +PD T++ + + + KEG +K +L E ++
Sbjct: 449 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIR 496
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 152/352 (43%), Gaps = 4/352 (1%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y P Y +L+ L + P AR+ + M+ G+ P Y L+ A C ++EA
Sbjct: 114 YAPSVPAYNAVLLALSDASLPS-ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAV 172
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM-DERSVTPNTVTQNIVLG 258
+ M+ C P+ TY+TL+ A A + E + M +E + PN VT N ++
Sbjct: 173 GVVGDMRG-AGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
G KAG + +V M+ PDV + NT+LS + G + + + G+
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGL-APDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLV 290
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P+ TF LI A K ++ +++ MR+ T+ +I+ F G
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
E+M G++ + LINGY G +R ++ +V Y+ +IS K
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCK 410
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
+L ++ ++M +K PD+ T+S + +E + L + LQ+
Sbjct: 411 VGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQL 462
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 187/445 (42%), Gaps = 13/445 (2%)
Query: 32 HRAQVPNFNLIHCSVTSTNKHTSFSSESAVAAKKRLWKEGEYPGVS--ETSIPGYRSKRT 89
++ +P+ +I C+ S + A + L G P V I GY K
Sbjct: 135 YQGDIPD--VIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGY-CKSG 191
Query: 90 PIKNLKKKLERKAKAKAWV--NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTY 147
I + LER + A V NT+ + D + +A++V + ++ Y P TY
Sbjct: 192 EIDKALQVLERMSVAPDVVTYNTILRSLCD---SGKLKEAMEVLDRQMQRECY-PDVITY 247
Query: 148 MKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKT 207
L+ A K+ +EM ++G +P Y L+ C+ +DEA LN M
Sbjct: 248 TILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMP- 306
Query: 208 LPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFD 267
L CQP+V T++ ++++ R+ E L DM + +P+ VT NI++ + +
Sbjct: 307 LYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLG 366
Query: 268 QMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
+ VL M + C P+ + N +L F + ++D + E + G P+ T+N L
Sbjct: 367 RAIDVLEKMPKHG-CMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTL 425
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
+ A K D ++ + TYN VI+ + +G ++ E+M +G+
Sbjct: 426 LTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGL 485
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
K D T+ L+ G G + I L I + YNA++ KA
Sbjct: 486 KPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAID 545
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYA 472
M EK C+P T++I+ E A
Sbjct: 546 FLAYMVEKGCKPTKATYTILIEGIA 570
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 164/405 (40%), Gaps = 41/405 (10%)
Query: 113 ETFSDHVLKKQWFQALQVFEMLK--EQPFYQ---PKEGTYMKLLVLLGKSGQPELARKVF 167
E F+ ++ ++ + ++ E LK E+ YQ P L+ +SG+ A ++
Sbjct: 106 EEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIM 165
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPN----------------- 210
+ G P Y L+ YC++ ID+A L +M P+
Sbjct: 166 EILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVAPDVVTYNTILRSLCDSGKL 225
Query: 211 --------------CQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNI 255
C PDV TY+ LI+A C D+ + ++ L +M ++ P+ VT N+
Sbjct: 226 KEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMK-LLDEMRKKGCKPDVVTYNV 284
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
++ G K G D+ + L+ M C+P+V T N IL + G+ ER
Sbjct: 285 LINGICKEGRLDEAIKFLNNM-PLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRK 343
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA-KH 374
G P TFNILI +KR+ + V+E M K S +YN ++ F +
Sbjct: 344 GCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRA 403
Query: 375 MEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVIS 434
+EY E M + G D T+ L+ G + + S + + YN VI
Sbjct: 404 IEY-LEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVID 462
Query: 435 ACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
K + + M+ K +PD T+S + EG D+
Sbjct: 463 GLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDE 507
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 108/248 (43%), Gaps = 7/248 (2%)
Query: 123 QWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
+W A ++ +ML++ P T+ L+ L + A V +M + G P
Sbjct: 329 RWMDAERLLADMLRKG--CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLS 386
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQD 240
Y LL +C+ +D A L M + C PD+ TY+TL+ A C D +E L Q
Sbjct: 387 YNPLLHGFCQEKKMDRAIEYLEIMVS-RGCYPDIVTYNTLLTALCKDGKADAAVEILNQ- 444
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
+ + +P +T N V+ G K G + +L M KPD+ T +T+L +G
Sbjct: 445 LSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGL-KPDIITYSTLLRGLGCEG 503
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+VD + + I P T+N ++ K + + + YM + T +TY
Sbjct: 504 KVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYT 563
Query: 361 NVIEAFSD 368
+IE +D
Sbjct: 564 ILIEGIAD 571
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 172/362 (47%), Gaps = 5/362 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
++ QA+++F+ + + YQP TY ++ L K G+ A +F +M E G +P Y
Sbjct: 207 KFGQAVELFDDMVARG-YQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTY 265
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
+ ++ + C++ ++EA + MK P+++TY++LI+ + R+ + +M
Sbjct: 266 STIIDSLCKDRRVNEALDIFSYMKA-KGISPNIFTYNSLIQGLCNFSRWREASAMLNEMM 324
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
++ PN VT ++++ + K G + VL M E +P+V T +++++ ++ + +V
Sbjct: 325 SLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGV-EPNVVTYSSLMNGYSLQAEV 383
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ ++ G P+ ++NILI Y K + + + M +YN +
Sbjct: 384 VEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTL 443
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I+ +G + F+ M G D T+ L++G+ G K R +
Sbjct: 444 IDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYL 503
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
N+ YN +I A K+ +L E +++ + + +P+ + ++ + KEG+ D+ A
Sbjct: 504 KPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDE--A 561
Query: 483 LE 484
LE
Sbjct: 562 LE 563
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 132/307 (42%), Gaps = 1/307 (0%)
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
FN M+ P + LL+A + +A ++L++ L PD YT LI
Sbjct: 109 FNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFF 168
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
R +L ++ + + + VT N ++ G K G F Q + M+ +PDV
Sbjct: 169 QLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGY-QPDV 227
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
T TI++ G+ + K G P+ T++ +I + K R ++ + Y
Sbjct: 228 HTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSY 287
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M+ TYN++I+ + + +M + + + TF LIN + G
Sbjct: 288 MKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGN 347
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ ++ +++ + NV Y+++++ +++E +++ M K C+PD +++I
Sbjct: 348 VFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNI 407
Query: 467 MTEAYAK 473
+ Y K
Sbjct: 408 LINGYCK 414
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 149/340 (43%), Gaps = 7/340 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F +K + P TY L+ L + A + NEM+ I P ++ L
Sbjct: 280 EALDIFSYMKAKGI-SPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLL 338
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET--LYQDMDE 243
+ +C+ + EA L M + +P+V TYS+L+ +++ E++E L+ M
Sbjct: 339 INIFCKEGNVFEARGVLKTMTEM-GVEPNVVTYSSLMNGY--SLQAEVVEARKLFDVMIT 395
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+ P+ + NI++ GY KA + +++ + M+ PD+ + NT++ G++
Sbjct: 396 KGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGL-TPDIVSYNTLIDGLCQLGRLR 454
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
++ G P+ T++IL+ + K+ K + M+ YN +I
Sbjct: 455 EAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILI 514
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
+A + K F ++ +G++ + + + +ING GL + + + R +
Sbjct: 515 DAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCP 574
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
N YN +I ++ D ++ M+EK D T
Sbjct: 575 PNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 143/336 (42%), Gaps = 28/336 (8%)
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
+L V ++++ G++ T + L+ C+ +A + M QPDV+TY+T
Sbjct: 174 DLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDM-VARGYQPDVHTYTT 232
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
+I L++ M E P+ VT + ++ K ++ + S M ++
Sbjct: 233 IINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYM-KAK 291
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYE------KFRNFGIDPETRTFNILIGAYGKK 334
P+++T N+++ N RW E + + I P TF++LI + K+
Sbjct: 292 GISPNIFTYNSLIQGLCN------FSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKE 345
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
+ V++ M ++ TY++++ +S + F+ M +G K D ++
Sbjct: 346 GNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSY 405
Query: 395 CCLINGYANAG-------LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
LINGY A LF+++I + ++ YN +I + L E
Sbjct: 406 NILINGYCKAKRIGEAKQLFNEMIHQ-------GLTPDIVSYNTLIDGLCQLGRLREAHD 458
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
++K M PD T+SI+ + + K+G K + L
Sbjct: 459 LFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRL 494
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 115/273 (42%), Gaps = 46/273 (16%)
Query: 125 FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPEL--ARKVFNEMVEEGIEPTPELY 182
F+A V + + E +P TY L+ G S Q E+ ARK+F+ M+ +G +P Y
Sbjct: 349 FEARGVLKTMTEMGV-EPNVVTYSSLMN--GYSLQAEVVEARKLFDVMITKGCKPDVFSY 405
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
L+ YC+ I EA N+M PD+ +Y+TLI R L+++M
Sbjct: 406 NILINGYCKAKRIGEAKQLFNEM-IHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNML 464
Query: 243 ERSVTPNTVTQNIVLGGYGKAG-------MFDQMER-------VLSGMLESATCK----- 283
P+ T +I+L G+ K G +F M+ V+ +L A CK
Sbjct: 465 TNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLK 524
Query: 284 ---------------PDVWTMNTILSVFANKGQVDMMERWYEKFRNF---GIDPETRTFN 325
P+V TI++ +G +++ E FRN G P ++N
Sbjct: 525 EARKLFSELFVQGLQPNVQIYTTIINGLCKEG---LLDEALEAFRNMEEDGCPPNEFSYN 581
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
++I + + + + ++ MR+ F +T
Sbjct: 582 VIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 94/252 (37%), Gaps = 3/252 (1%)
Query: 227 DAMRFELIE---TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK 283
DA F I+ + M R P + N +L K + LS +E A
Sbjct: 95 DASSFRNIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLS 154
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
PD +T++ +++ F +VD+ K G+ TFN LI K + + +
Sbjct: 155 PDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVEL 214
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ M + TY +I +G+ F +M G + D T+ +I+
Sbjct: 215 FDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCK 274
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
++ + I+ N+ YN++I E + M + P+ T
Sbjct: 275 DRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVT 334
Query: 464 FSIMTEAYAKEG 475
FS++ + KEG
Sbjct: 335 FSLLINIFCKEG 346
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 165/353 (46%), Gaps = 9/353 (2%)
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
+ +K Q +P TY L+ + K G+ E A K+F EMV++G+ P+ +Y L+ +
Sbjct: 278 ILTTMKRQKI-EPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGF 336
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
C +D A ++M P + TY++LI A R + E + +++ E+ ++P+
Sbjct: 337 CNKGNLDMASAYKDEMLK-KGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPD 395
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
+T NI++ GY + + + ML S KP T ++L V + K ++ + +
Sbjct: 396 AITYNILINGYCRCANAKKAFLLHDEMLASGI-KPTKKTYTSLLHVLSKKNRMKEADDLF 454
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
+K + G+ P+ FN LI + +++ M +++ P T+N +++
Sbjct: 455 KKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCRE 514
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL---QIAENV 426
G + F++M G+K D +F LI+GY+ G + + R+ +++ V
Sbjct: 515 GKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRG---DIKDAFRVRNEMLDTGFNPTV 571
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
YNA++ K + E + K M K PD T+ + E AK + D+
Sbjct: 572 LTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 157/365 (43%), Gaps = 7/365 (1%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
W ++F + + Y T+ ++ +L K G+ + A+ M G++P Y
Sbjct: 206 WVLYAEMFRLRIKSSVY-----TFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYN 260
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
++ YC + ++ A L MK +PD +TY +LI R E ++++M +
Sbjct: 261 TIVHGYCSSGRVEAADAILTTMKR-QKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQ 319
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+ + P+ V N ++ G+ G D ML+ P + T N+++ + + D
Sbjct: 320 KGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGI-SPTMSTYNSLIHALFMEQRTD 378
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
E ++ + GI P+ T+NILI Y + K + + M T TY +++
Sbjct: 379 EAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLL 438
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
S K + F+++ +EG+ D F LI+G+ + ++ ++++
Sbjct: 439 HVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVP 498
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ +N ++ + + E ++ MK + +PD +F+ + Y++ G + +
Sbjct: 499 PDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRV 558
Query: 484 EQEKL 488
E L
Sbjct: 559 RNEML 563
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 157/357 (43%), Gaps = 17/357 (4%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A + F +KE+ P T LL L K + E A ++ EM I+ + + +
Sbjct: 169 EAFECFYTMKEKGVL-PTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIM 227
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ + +A + M+T +P++ TY+T++ + R E + + M +
Sbjct: 228 INVLCKEGKLKKAKDFVGHMET-SGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK 286
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P++ T ++ G K G ++ ++ M++ +P NT++ F NKG +DM
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGL-RPSAVIYNTLIDGFCNKGNLDMA 345
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ ++ GI P T+N LI A ++ D+ +++ +++ + TYN +I
Sbjct: 346 SAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILING 405
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISSVRLAS 418
+ +AK ++M A G+K KT+ L++ + LF K+ S L
Sbjct: 406 YCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPD 465
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ +NA+I ++ + K M PD TF+ + + + +EG
Sbjct: 466 AI-------MFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREG 515
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 120/279 (43%), Gaps = 13/279 (4%)
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER--- 271
V+ Y LIK+C D R + + M E+ V P T N +L +F ++ R
Sbjct: 153 VFDY--LIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLL------SLFLKLNRTEA 204
Query: 272 --VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
VL + K V+T N +++V +G++ + + G+ P T+N ++
Sbjct: 205 AWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVH 264
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
Y + +++ M++ + S TY ++I G + FE+M +G++
Sbjct: 265 GYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRP 324
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
+ LI+G+ N G + K I+ +S YN++I A E E +
Sbjct: 325 SAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMI 384
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
K ++EK PD+ T++I+ Y + K + L E L
Sbjct: 385 KEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEML 423
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 81/191 (42%), Gaps = 6/191 (3%)
Query: 305 MERWYEKFRNF------GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
M R E F F G+ P T N L+ + K + + M +L+ + T
Sbjct: 164 MNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYT 223
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
+N +I G K + M G+K + T+ +++GY ++G + +
Sbjct: 224 FNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMK 283
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ +I + Y ++IS K L E ++++ M +K RP + ++ + + + +G D
Sbjct: 284 RQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLD 343
Query: 479 KVYALEQEKLQ 489
A + E L+
Sbjct: 344 MASAYKDEMLK 354
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 164/393 (41%), Gaps = 43/393 (10%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYC----------- 190
P TY ++ L G+ A V +EM G P P +Y +L A C
Sbjct: 113 PNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSA 172
Query: 191 ----------------------------RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
+ +DEA L + T C PDV +Y+ ++
Sbjct: 173 VRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVL 232
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
K A R+ ++ L ++M PN VT N ++G + G+F+++ +VL+ M++ C
Sbjct: 233 KGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHG-C 291
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
PD+ T+L +G +++ ++ ++G+ P +N ++ +++
Sbjct: 292 TPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEE 351
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
++ M P T+N +++ F G + EQM G D T+ +ING+
Sbjct: 352 LLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFC 411
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
GL + + ++ + N Y V+ A+ ++ E + +M E+ C P+
Sbjct: 412 KEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPV 471
Query: 463 TFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
TF+ + K+G+ ++ A+E K QMLL
Sbjct: 472 TFNTVINFLCKKGLVEQ--AIELLK-QMLLNGC 501
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 150/338 (44%), Gaps = 2/338 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ L ++G E +V +MV+ G P +Y +L C+ ++ A
Sbjct: 258 PNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEI 317
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L++M + +P+V Y+T++K A R+E E L +M + + VT NI++ +
Sbjct: 318 LDRMPSY-GLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFC 376
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G+ ++ +L MLE C PDV T T+++ F +G +D + G P T
Sbjct: 377 QNGLVYRVIELLEQMLEHG-CVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNT 435
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
++ I++ + +M M + T+N VI G + +Q
Sbjct: 436 ISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQ 495
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G D ++ +I+G AG + + + + ++ N Y+++ SA K
Sbjct: 496 MLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGR 555
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ + +++ +++ R D+ ++ + + K G D+
Sbjct: 556 INRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDR 593
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 109/241 (45%), Gaps = 2/241 (0%)
Query: 165 KVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
++ +M+E G P YT ++ +C+ LIDEA + L M C+P+ +Y+ ++K
Sbjct: 386 ELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAAC-GCRPNTISYTIVLKG 444
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
A R+ E L M E+ +PN VT N V+ K G+ +Q +L ML + C P
Sbjct: 445 LCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNG-CSP 503
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
D+ + +T++ G+ D N G+ P T ++ + A K+ +++ +
Sbjct: 504 DLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMF 563
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
+ ++ + + YN VI + G M + G + T+ LI G A+
Sbjct: 564 DNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASE 623
Query: 405 G 405
G
Sbjct: 624 G 624
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 140/365 (38%), Gaps = 43/365 (11%)
Query: 114 TFSDHVLKKQWFQALQVFEMLKEQPFY--QPKEGTYMKLLVLLGKSGQPELARKVFNEMV 171
T D V K+ + E+L P Y +P Y +L L + + E A ++ EM
Sbjct: 300 TVLDGVCKEGHLEVAH--EILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMF 357
Query: 172 EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMR 230
+ + L+ +C+N L+ L QM C PDV TY+T+I C + +
Sbjct: 358 DNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLE-HGCVPDVITYTTVINGFCKEGLI 416
Query: 231 FELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMN 290
E + L + M PNT++ IVL G A + E ++S M+E C P+ T N
Sbjct: 417 DEAV-MLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQG-CSPNPVTFN 474
Query: 291 TILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
T+++ KG V+ ++ G P+ +++ +I GK D+ ++ M
Sbjct: 475 TVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNK 534
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
+ Y+++ A S G + F+ + +++D
Sbjct: 535 GMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDA------------------- 575
Query: 411 ISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
YNAVIS+ K M C P+ T++I+
Sbjct: 576 ----------------VLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRG 619
Query: 471 YAKEG 475
A EG
Sbjct: 620 LASEG 624
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 133/316 (42%), Gaps = 16/316 (5%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y A+++ YCR + A ++ P+ YTY +++A R ++ +M
Sbjct: 86 YNAMVSGYCRAGQLASA----RRLAASVPVPPNAYTYFPVVRALCARGRIADALSVLDEM 141
Query: 242 DERSVTPNTVTQNIVLGGYGK---AGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
R P +++L G F RVL L C DV N +L+ +
Sbjct: 142 RRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQD-LHGRGCALDVGNCNLVLNAVCD 200
Query: 299 KG-QVDMMERWYEKF-RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
+G VD R +FG DP+ ++N ++ + + ++ +ME M ++ P
Sbjct: 201 QGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNV 260
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG---LFHKVISS 413
T+N +I G + + QM G D + + +++G G + H+++
Sbjct: 261 VTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILD- 319
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
R+ S + NV YN V+ A+ + E + M + C D TF+I+ + + +
Sbjct: 320 -RMPS-YGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQ 377
Query: 474 EGMNDKVYALEQEKLQ 489
G+ +V L ++ L+
Sbjct: 378 NGLVYRVIELLEQMLE 393
>gi|326487476|dbj|BAJ89722.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 805
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 181/388 (46%), Gaps = 8/388 (2%)
Query: 106 AWVNTVAETFSDHVLKKQ--WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQ--PE 161
A ++ A T H L ++ + +AL++F+ L+ + P TY +L + G+ G+ P
Sbjct: 179 ARLDVRAYTTVLHALSREGRYERALRLFDELRREGV-APTRVTYNVVLDVYGRMGRSWPR 237
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
+ + +M G+EP + ++AA R+ L+DEA +K + P V TY+ L
Sbjct: 238 VV-ALLADMRAAGVEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHA-PCVVTYNAL 295
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
++ A + + ++M++ P+ VT N + G Y +AG + + + + M+
Sbjct: 296 LQVFGKAGNYTEALRVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKGL 355
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
P+ +T NTI++ + N G+VD +++ + G P T T+N+++G GKK + M
Sbjct: 356 L-PNTFTYNTIMTAYGNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAML 414
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
++ M + T+N ++ G ++ E M + ++ T+ LI Y
Sbjct: 415 EMLGEMSRSGCTPNRVTWNTLLAVCGKRGMESYVTRVLEGMKSCKVELCRDTYNTLICAY 474
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
G + A ++ YNA+++ + D + +MK + +P+
Sbjct: 475 GRCGSRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPND 534
Query: 462 ETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
++S++ + +AK G + A+E+E Q
Sbjct: 535 MSYSLLLQCHAKGGNAAGIEAIEKEVYQ 562
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 162/361 (44%), Gaps = 17/361 (4%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ FE LK + + P TY LL + GK+G A +V EM + G +P Y L
Sbjct: 272 EAVAFFEDLKARG-HAPCVVTYNALLQVFGKAGNYTEALRVLREMEDAGCKPDAVTYNEL 330
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+Y R EA ++ M P+ +TY+T++ A +A + + L+ M +
Sbjct: 331 AGSYARAGFYQEAAKCIDTMIG-KGLLPNTFTYNTIMTAYGNAGKVDEALALFDRMKKNG 389
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P T T N+VLG GK F M +L M S C P+ T NT+L+V +G +
Sbjct: 390 FIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSG-CTPNRVTWNTLLAVCGKRGMESYV 448
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKK-------RMYDKMSSVMEYMRKLQFPWTSST 358
R E ++ ++ T+N LI AYG+ +MYD+M++ F +T
Sbjct: 449 TRVLEGMKSCKVELCRDTYNTLICAYGRCGSRANAFKMYDEMTAA-------GFAPCLTT 501
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN ++ S GD +M +EG K + ++ L+ +A G + + +
Sbjct: 502 YNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVY 561
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ I + ++ A K L +ER ++ +K + +PD + M YAK G+
Sbjct: 562 QGNIFPSWVILRTLVIANFKCRRLEGIERAFQEVKARGHKPDLVILNSMLSIYAKNGLYS 621
Query: 479 K 479
K
Sbjct: 622 K 622
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 135/331 (40%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL L SG E A + EG P + ++ A R D L++M P
Sbjct: 118 LLKALELSGHWEWALALLRWARAEGAADGPAPFEMVVRALGREGRHDAVCALLDEMPLPP 177
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+ DV Y+T++ A R+E L+ ++ V P VT N+VL YG+ G
Sbjct: 178 GARLDVRAYTTVLHALSREGRYERALRLFDELRREGVAPTRVTYNVVLDVYGRMGRSWPR 237
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
L + +A +PD +T +T+++ G VD ++E + G P T+N L+
Sbjct: 238 VVALLADMRAAGVEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQ 297
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+GK Y + V+ M + TYN + +++ G + + M +G+
Sbjct: 298 VFGKAGNYTEALRVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKGLLP 357
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
+T T+ ++ Y NAG + ++ K + YN V+ K M +
Sbjct: 358 NTFTYNTIMTAYGNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEML 417
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
M C P+ T++ + K GM V
Sbjct: 418 GEMSRSGCTPNRVTWNTLLAVCGKRGMESYV 448
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 136/323 (42%), Gaps = 33/323 (10%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ G+ G A K+++EM G P Y ALL R A +++M
Sbjct: 466 TYNTLICAYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKM 525
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN-TVTQNIVLGGYGKAG 264
K+ +P+ +YS L++ IE + +++ + ++ P+ + + +V+ + K
Sbjct: 526 KS-EGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYQGNIFPSWVILRTLVIANF-KCR 583
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
+ +ER +++ KPD+ +N++LS++A G +E G+ P+ T+
Sbjct: 584 RLEGIERAFQ-EVKARGHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQLGLSPDLITY 642
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS---------TYNNVIEAFSDMGDAKHM 375
N L+ Y K + ++ +R Q +YN VI F G K
Sbjct: 643 NSLMDMYAKSNEPWEAEKILNRLRSSQSQQQQQQQQLKPDVVSYNTVINGFCKEGLIKEA 702
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
+ +M A+G+ T+ L+ GYA+ +F + A V Y
Sbjct: 703 QRVLSEMIADGVAPCVITYHTLVGGYASREMFAE-------------AREVVGY------ 743
Query: 436 CIKADDLMEMERVYKRMKEKHCR 458
+ L ME Y+R+ + +CR
Sbjct: 744 -MIQRKLKPMELTYRRVVDSYCR 765
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 92/435 (21%), Positives = 160/435 (36%), Gaps = 86/435 (19%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+ +AL+V + E +P TY +L ++G + A K + M+ +G+ P Y
Sbjct: 304 NYTEALRVLREM-EDAGCKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTY 362
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
++ AY +DEA ++MK P TY+ ++ RF + + +M
Sbjct: 363 NTIMTAYGNAGKVDEALALFDRMKK-NGFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMS 421
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW--TMNTILSVFANKG 300
TPN VT N +L GK GM + RVL GM +CK ++ T NT++ + G
Sbjct: 422 RSGCTPNRVTWNTLLAVCGKRGMESYVTRVLEGM---KSCKVELCRDTYNTLICAYGRCG 478
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+ Y++ G P T+N L+ ++ + S++ M+ F +Y+
Sbjct: 479 SRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSYS 538
Query: 361 NVIEAFSDMGDA-----------------------------------KHMEYTFEQMHAE 385
+++ + G+A + +E F+++ A
Sbjct: 539 LLLQCHAKGGNAAGIEAIEKEVYQGNIFPSWVILRTLVIANFKCRRLEGIERAFQEVKAR 598
Query: 386 GMKADTKTFCCLINGYANAGLFHKV------ISSVRLASKL------------------- 420
G K D +++ YA GL+ K I + L+ L
Sbjct: 599 GHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQLGLSPDLITYNSLMDMYAKSNEPWEA 658
Query: 421 -------------------QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
Q+ +V YN VI+ K + E +RV M P
Sbjct: 659 EKILNRLRSSQSQQQQQQQQLKPDVVSYNTVINGFCKEGLIKEAQRVLSEMIADGVAPCV 718
Query: 462 ETFSIMTEAYAKEGM 476
T+ + YA M
Sbjct: 719 ITYHTLVGGYASREM 733
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 110/272 (40%), Gaps = 48/272 (17%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR--NSLIDE 197
+ P TY LL +L + G AR + ++M EG +P Y+ LL + + N+ E
Sbjct: 495 FAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSLLLQCHAKGGNAAGIE 554
Query: 198 AFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVL 257
A + + N P TL+ A R E IE +Q++ R P+ V N +L
Sbjct: 555 A---IEKEVYQGNIFPSWVILRTLVIANFKCRRLEGIERAFQEVKARGHKPDLVILNSML 611
Query: 258 GGYGKAGMFD-----------------------------------QMERVLSGM------ 276
Y K G++ + E++L+ +
Sbjct: 612 SIYAKNGLYSKAMEMFESIEQLGLSPDLITYNSLMDMYAKSNEPWEAEKILNRLRSSQSQ 671
Query: 277 --LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
+ KPDV + NT+++ F +G + +R + G+ P T++ L+G Y +
Sbjct: 672 QQQQQQQLKPDVVSYNTVINGFCKEGLIKEAQRVLSEMIADGVAPCVITYHTLVGGYASR 731
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
M+ + V+ YM + + TY V++++
Sbjct: 732 EMFAEAREVVGYMIQRKLKPMELTYRRVVDSY 763
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 11/165 (6%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEM---------VEEGIE 176
+A+++FE + EQ P TY L+ + KS +P A K+ N + ++ ++
Sbjct: 622 KAMEMFESI-EQLGLSPDLITYNSLMDMYAKSNEPWEAEKILNRLRSSQSQQQQQQQQLK 680
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
P Y ++ +C+ LI EA L++M P V TY TL+ F
Sbjct: 681 PDVVSYNTVINGFCKEGLIKEAQRVLSEM-IADGVAPCVITYHTLVGGYASREMFAEARE 739
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
+ M +R + P +T V+ Y +A ++ L+ + E+ T
Sbjct: 740 VVGYMIQRKLKPMELTYRRVVDSYCRAKRYEDARDFLAVVAEADT 784
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 185/417 (44%), Gaps = 60/417 (14%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A +V +++E+ +P T+ ++ L K+G+ E ARKVF+EMV EG+ P Y LL
Sbjct: 206 AERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLL 265
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER-- 244
+ YC+ + E+ ++M T PDV T+++LI A A E L M ER
Sbjct: 266 SGYCKVGCLHESLAVFSEM-TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 324
Query: 245 ---------------------------------SVTPNTVTQNIVLGGYGKAGMFDQMER 271
+ P+ V N ++ GY K G D + R
Sbjct: 325 RMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD-LAR 383
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
L +E+ KPDV T +TI+S + G +D + +K G+ P+ T++ LI
Sbjct: 384 ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 443
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
+++ + + E M +L TY +I+ G+ + ++M +G+ D
Sbjct: 444 CEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDV 503
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKL----QIAENVSFYNAVISACIKAD------- 440
T+ LING + + + + RL KL + +N+ Y+A++ C KA+
Sbjct: 504 VTYSVLINGLSKSA---RTKEAHRLLFKLYHEDPVPDNIK-YDALMLCCSKAEFKSVVAL 559
Query: 441 -------DLM-EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
LM E ++VY+ M +++ + D +SI+ + + G K + ++ L+
Sbjct: 560 LKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLR 616
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 151/348 (43%), Gaps = 1/348 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L G+ E A V +M G P Y L+AA+CR +D A
Sbjct: 150 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 209
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
++ M+ N +P++ T+++++ A R E ++ +M + P+ V+ N +L GY
Sbjct: 210 VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC 269
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G + V S M + PDV T +++ G ++ + R G+
Sbjct: 270 KVGCLHESLAVFSEMTQRGLV-PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNE 328
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
TF LI + KK D +E MRK + YN +I + +G +
Sbjct: 329 VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIRE 388
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M A+ +K D T+ +I+GY G + K + + Y+++I +
Sbjct: 389 MEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKR 448
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
L + +++ M + +PD T++ + + + KEG +K +L E ++
Sbjct: 449 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIR 496
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 152/352 (43%), Gaps = 4/352 (1%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y P Y +L+ L + P AR+ + M+ G+ P Y L+ A C ++EA
Sbjct: 114 YAPSVPAYNAVLLALSDASLPS-ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAV 172
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM-DERSVTPNTVTQNIVLG 258
+ M+ C P+ TY+TL+ A A + E + M +E + PN VT N ++
Sbjct: 173 GVVGDMRG-AGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
G KAG + +V M+ PDV + NT+LS + G + + + G+
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGL-APDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLV 290
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P+ TF LI A K ++ +++ MR+ T+ +I+ F G
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
E+M G++ + LINGY G +R ++ +V Y+ +IS K
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCK 410
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
+L ++ ++M +K PD+ T+S + +E + L + LQ+
Sbjct: 411 VGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQL 462
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 164/381 (43%), Gaps = 35/381 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR---------- 191
P TY ++ L G+ A V +EM G P P +Y +L A CR
Sbjct: 120 PNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRV 179
Query: 192 --------------------NSLIDEAFV--TLNQMKTLPN--CQPDVYTYSTLIKACVD 227
N++ D+ V L+ ++ LP+ C+PDV +Y+ ++K
Sbjct: 180 LEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCM 239
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
A R+ ++ L ++M + PN VT N ++ + G+F+++ VL+ M+E C PD+
Sbjct: 240 AKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHG-CTPDIR 298
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
TI+ +G +++ + ++G+ P +N L+ +++ ++ M
Sbjct: 299 MYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEM 358
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
P T+N +++ F G + EQM G D T+ +ING+ GL
Sbjct: 359 FDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLI 418
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ + ++ + N Y V+ A+ ++ E + +M ++ C + TF+ +
Sbjct: 419 DEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTL 478
Query: 468 TEAYAKEGMNDKVYALEQEKL 488
K+G+ ++ L ++ L
Sbjct: 479 INFLCKKGLVEQAIELLKQML 499
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 163/391 (41%), Gaps = 38/391 (9%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
+ K+W ++ E + P T+ L+ L ++G E +V +MVE G P
Sbjct: 239 MAKRWGCVQELMEEMVRMAC-PPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDI 297
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+Y ++ C+ ++ A LN+M + +P+V Y+TL+K A R+E E L
Sbjct: 298 RMYATIIDGICKEGHLEVAHEILNRMPSY-GLKPNVVCYNTLLKGLCSAERWEETEELLA 356
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
+M ++ + VT NI++ + + G+ D++ +L MLE C PDV T T+++ F +
Sbjct: 357 EMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERG-CMPDVITYTTVINGFCKE 415
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G +D + G P T ++ I++ + +M M + P T+
Sbjct: 416 GLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITF 475
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-------------- 405
N +I G + +QM G D ++ +I+G AG
Sbjct: 476 NTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVN 535
Query: 406 --------LFHKVISSV----RLASKLQIAENVS---------FYNAVISACIKADDLME 444
++ + S++ R+ +Q+ +N+ YNAVIS+ K +
Sbjct: 536 KGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETER 595
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
M C P+ T++I+ A EG
Sbjct: 596 AIEFLAYMVSSGCVPNESTYTILIRGLASEG 626
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 136/311 (43%), Gaps = 11/311 (3%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y A++A YCR ++ A ++ P+ YTY +++A R + +M
Sbjct: 93 YNAMVAGYCRAGQLESA----RRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEM 148
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
R P +++L + G F RVL L + C DV N +L+ ++G
Sbjct: 149 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLED-LHARGCALDVGNCNLVLNAICDQGS 207
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
VD +FG +P+ ++N ++ + + + +ME M ++ P T+N
Sbjct: 208 VDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNT 267
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG---LFHKVISSVRLAS 418
+I G + + QM G D + + +I+G G + H++++ R+ S
Sbjct: 268 LISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILN--RMPS 325
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ NV YN ++ A+ E E + M +K C D TF+I+ + + + G+ D
Sbjct: 326 -YGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVD 384
Query: 479 KVYALEQEKLQ 489
+V L ++ L+
Sbjct: 385 RVIELLEQMLE 395
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 116/276 (42%), Gaps = 37/276 (13%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
T+ L+ ++G + ++ +M+E G P YT ++ +C+ LIDEA + L M
Sbjct: 369 TFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 428
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
T C+P+ +Y+ ++K A R+ E L M ++ N +T N ++ K G+
Sbjct: 429 -TACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGL 487
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTIL-------------------------------- 293
+Q +L ML + C PD+ + +T++
Sbjct: 488 VEQAIELLKQMLVNG-CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYS 546
Query: 294 ---SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
S + +G+++ + + ++ ++ I + +N +I + K+ ++ + YM
Sbjct: 547 SIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSS 606
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
STY +I + G K + ++ ++G
Sbjct: 607 GCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 149/331 (45%), Gaps = 2/331 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY ++ L K G A +F+EM+ GI P +Y++L+ CR + EA +M
Sbjct: 1087 TYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEM 1146
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ DVYTY++LI A ++ + M +R +P+ T I++ G K G
Sbjct: 1147 EG-RGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGK 1205
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+ +++L M +PD+ T NT+++ GQ++ + +E + GI ++N
Sbjct: 1206 VGEAQQILELMRHKGK-EPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYN 1264
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
ILI Y K + D+ E MR ++ TYN +I A G + + F +M
Sbjct: 1265 ILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTC 1324
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G T+C L++G G + + + K + N+ ++ ++ +A L E
Sbjct: 1325 GQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEA 1384
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ + + + PD+ ++I+ +GM
Sbjct: 1385 WKQFDEISKNGLEPDTIAYNILINGLCNKGM 1415
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 6/275 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A Q+ E+++ + +P TY L+ L GQ E A K+F + + GI+ Y L
Sbjct: 1208 EAQQILELMRHKG-KEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNIL 1266
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ YC++ IDEAF +M+ +P TY+TLI A + R + L+ +M
Sbjct: 1267 INGYCKDQKIDEAFRFFEEMRP-KGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCG 1325
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
T ++L G K G ++ + + ++ KP++ + +L G+++
Sbjct: 1326 QFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEH-KPNIEVFSILLDGMCRAGKLEEA 1384
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ +++ G++P+T +NILI K M + ++ M + S T+N +I+
Sbjct: 1385 WKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQN 1444
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKAD---TKTFCCL 397
+ E+M D T CL
Sbjct: 1445 LLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCL 1479
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/345 (18%), Positives = 140/345 (40%), Gaps = 45/345 (13%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
WF L V + P T+ L+ L K G+ A+++ M +G EP Y
Sbjct: 1176 WFLNLMV------DRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYN 1229
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
L+ C L+ DA + L++ + +
Sbjct: 1230 TLMNGLC------------------------------LVGQLEDATK------LFESLAD 1253
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
R + N + NI++ GY K D+ R M KP T NT++ G+V
Sbjct: 1254 RGIKLNVFSYNILINGYCKDQKIDEAFRFFEEM-RPKGLKPSTVTYNTLIGALCQSGRVR 1312
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
++ + + + G + T+ +L+ K ++ + + ++K + ++ ++
Sbjct: 1313 TAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILL 1372
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV-RLASKLQI 422
+ G + F+++ G++ DT + LING N G+ + + + ++ K +
Sbjct: 1373 DGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCL 1432
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
++++F N +I +K +++ E ++ + M+ ++ PD S++
Sbjct: 1433 PDSITF-NVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSML 1476
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/360 (18%), Positives = 142/360 (39%), Gaps = 40/360 (11%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A K+F+ + P + + LLA+ + F ++ + QPD+YT + LI
Sbjct: 930 AIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDV-GIQPDLYTLNILI 988
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVT-QNIVLGGYGKAG------MFDQMER---- 271
C ++ +R P+ VT +V G + + G +FD+M +
Sbjct: 989 HCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLL 1048
Query: 272 --------VLSGMLES--------------ATCKPDVWTMNTILSVFANKGQVDMMERWY 309
+++G+ ++ CK DV+T I+ G +
Sbjct: 1049 GDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMF 1108
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS---TYNNVIEAF 366
+ GI P+ ++ L+ + + ++ +E+ ++++ S+ TYN++I
Sbjct: 1109 SEMIGAGILPDVVVYSSLMDGLCR---FGRLKEALEFFKEMEGRGISADVYTYNSLIHGL 1165
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
S G K + + M G D TF LI+G G + + L ++
Sbjct: 1166 SRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDI 1225
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
YN +++ L + ++++ + ++ + + +++I+ Y K+ D+ + +E
Sbjct: 1226 LTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEE 1285
>gi|357162065|ref|XP_003579293.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Brachypodium distachyon]
Length = 858
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 167/387 (43%), Gaps = 21/387 (5%)
Query: 118 HVLK------KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVL----LGKSGQPELARKVF 167
H+L+ K +AL+VF P KLL LGK +P+LAR+ F
Sbjct: 164 HILRELGDRDKSAIRALEVFH--AALPLVGNGSVDKGKLLTAAIGALGKMSRPDLARRAF 221
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC-- 225
+ + G T +AL++AY R+ L++EA L MK +P TY+ +I AC
Sbjct: 222 DAGIAGGYGNTVFANSALISAYARSGLVNEAMGVLESMKG-AGLRPTTVTYNAVIDACGK 280
Query: 226 --VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK 283
VD +RF L ++ M + P+ T N +L +AG + + M+ +
Sbjct: 281 GGVD-LRFTL--GYFRQMLRDRLCPDRKTFNSLLSACSRAGHLEDARALFDEMIHLGIGR 337
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
D++T NT + G +++ + + P T++ LI Y K YD+ +
Sbjct: 338 -DIYTYNTFIDAICKCGNIELAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKL 396
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
E M+ L YN V+ + G + ++M G++ DT T+ LINGY
Sbjct: 397 YEKMKSLGIQLDRVCYNTVLAIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGYGK 456
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
G V V+ + +A +V Y+ +I KA + VY KE +PD
Sbjct: 457 QGRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVL 516
Query: 464 FSIMTEAYAKEGMNDKVYALEQEKLQM 490
FS + AK G+ + +L + +M
Sbjct: 517 FSSFIDTLAKNGLVEWALSLLNDMTEM 543
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 165/367 (44%), Gaps = 14/367 (3%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
+ML+++ P T+ LL ++G E AR +F+EM+ GI Y + A C+
Sbjct: 294 QMLRDR--LCPDRKTFNSLLSACSRAGHLEDARALFDEMIHLGIGRDIYTYNTFIDAICK 351
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
I+ A L M+ N +P+V TYSTLI +++ LY+ M + + V
Sbjct: 352 CGNIELAMQVLLDMEA-KNVKPNVVTYSTLIDGYSKLEKYDEALKLYEKMKSLGIQLDRV 410
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
N VL Y KAG + ++ V M E + + D T N++++ + +G++D++ +
Sbjct: 411 CYNTVLAIYVKAGKYGEIAIVCDEM-EDSGIEKDTVTYNSLINGYGKQGRLDIVSFLVQD 469
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
R G+ P T++ LI Y K M+ +V ++ +++ I+ + G
Sbjct: 470 MRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGL 529
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK--------VISSVRLASKLQIA 423
+ M G+K + T+ +I+ + + + + I V ++ A
Sbjct: 530 VEWALSLLNDMTEMGIKPNVVTYNTIIDAFGKSKVLSEEDPEAGEMGIVGVYNGQIIRAA 589
Query: 424 ENVSFYNAVISACI-KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK-EGMNDKVY 481
V+ + I + ++ +L + ++++M ++ RP+ TFS + A ++ D
Sbjct: 590 NPVTRGRSAIDVRMRRSQELYFILELFQKMVQQGVRPNVVTFSAILNACSRCNNFEDAAL 649
Query: 482 ALEQEKL 488
LEQ +L
Sbjct: 650 LLEQLRL 656
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 146/334 (43%), Gaps = 44/334 (13%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA------------------------- 184
L+ +SG A V M G+ PT Y A
Sbjct: 239 LISAYARSGLVNEAMGVLESMKGAGLRPTTVTYNAVIDACGKGGVDLRFTLGYFRQMLRD 298
Query: 185 -----------LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
LL+A R +++A ++M L D+YTY+T I A EL
Sbjct: 299 RLCPDRKTFNSLLSACSRAGHLEDARALFDEMIHL-GIGRDIYTYNTFIDAICKCGNIEL 357
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
+ DM+ ++V PN VT + ++ GY K +D+ ++ M +S + D NT+L
Sbjct: 358 AMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKLYEKM-KSLGIQLDRVCYNTVL 416
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
+++ G+ + ++ + GI+ +T T+N LI YGK+ D +S +++ MR+
Sbjct: 417 AIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGYGKQGRLDIVSFLVQDMRRRGVA 476
Query: 354 WTSSTYNNVIEAFSDM---GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
+ TY+ +I+ +S GDA ++ F++ G+K D F I+ A GL
Sbjct: 477 PSVLTYSTLIDIYSKAGMHGDAFNVYLDFKE---SGLKPDVVLFSSFIDTLAKNGLVEWA 533
Query: 411 ISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
+S + +++ I NV YN +I A K+ L E
Sbjct: 534 LSLLNDMTEMGIKPNVVTYNTIIDAFGKSKVLSE 567
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 4/224 (1%)
Query: 114 TFSDHVLKKQWFQ-ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE 172
TF D + K + A+QV + E +P TY L+ K + + A K++ +M
Sbjct: 344 TFIDAICKCGNIELAMQVL-LDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKLYEKMKS 402
Query: 173 EGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE 232
GI+ Y +LA Y + E + ++M+ + D TY++LI R +
Sbjct: 403 LGIQLDRVCYNTVLAIYVKAGKYGEIAIVCDEMED-SGIEKDTVTYNSLINGYGKQGRLD 461
Query: 233 LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTI 292
++ L QDM R V P+ +T + ++ Y KAGM V ES KPDV ++
Sbjct: 462 IVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGL-KPDVVLFSSF 520
Query: 293 LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
+ A G V+ GI P T+N +I A+GK ++
Sbjct: 521 IDTLAKNGLVEWALSLLNDMTEMGIKPNVVTYNTIIDAFGKSKV 564
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 62/155 (40%), Gaps = 9/155 (5%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A V+ KE +P + + L K+G E A + N+M E GI+P Y ++
Sbjct: 498 AFNVYLDFKESGL-KPDVVLFSSFIDTLAKNGLVEWALSLLNDMTEMGIKPNVVTYNTII 556
Query: 187 AAYCRNSLIDE--------AFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
A+ ++ ++ E V + + + P S + + I L+
Sbjct: 557 DAFGKSKVLSEEDPEAGEMGIVGVYNGQIIRAANPVTRGRSAIDVRMRRSQELYFILELF 616
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
Q M ++ V PN VT + +L + F+ +L
Sbjct: 617 QKMVQQGVRPNVVTFSAILNACSRCNNFEDAALLL 651
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 174/373 (46%), Gaps = 12/373 (3%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
LK Q +AL + L Q F Q + +Y L+ + K G A K+ ++ +P
Sbjct: 141 LKGQVKKALHFHDKLLAQGF-QLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNV 199
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLY 238
E+Y+ ++ A C+ L+ EA+ ++M T+ DV TYSTLI C++ E I L
Sbjct: 200 EMYSTIIDALCKYQLVSEAYGLFSEM-TVKGISADVVTYSTLIYGFCIEGKLKEAI-GLL 257
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
+M +++ PN T NI++ K G + + VL+ ML+ A KPDV T +T++ +
Sbjct: 258 NEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLK-ACVKPDVITYSTLMDGYFL 316
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
+V + + G+ P+ T+ ILI + K +M D+ ++ + M + T
Sbjct: 317 VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT 376
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
Y+++I+ G ++ ++M G AD T+ LI+G G + I+
Sbjct: 377 YSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMK 436
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+I N+ + ++ K L + + V++ + K + T+++M + K+G
Sbjct: 437 DQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQG--- 493
Query: 479 KVYALEQEKLQML 491
L +E L ML
Sbjct: 494 ----LLEEALTML 502
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 93/192 (48%), Gaps = 3/192 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F+ + ++ P TY L+ L KSG+ + +EM + G Y++L
Sbjct: 357 EALNLFKEMHQKNMV-PGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSL 415
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+N +D A N+MK +P+++T++ L+ R + + ++QD+ +
Sbjct: 416 IDGLCKNGHLDRAIALFNKMKD-QEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 474
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
N T N+++ G+ K G+ ++ +LS M E C P+ +T TI+ K + D
Sbjct: 475 YHLNVYTYNVMINGHCKQGLLEEALTMLSKM-EDNGCIPNAFTFETIIIALFKKDENDKA 533
Query: 306 ERWYEKFRNFGI 317
E+ + G+
Sbjct: 534 EKLLRQMIARGL 545
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 94/260 (36%), Gaps = 36/260 (13%)
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
TP + N +L + K + LS LE +PD+ T+N +++ F + GQ+
Sbjct: 56 TPPIIQFNKILDSFAKMKHYSTAVS-LSHRLELKGIQPDLITLNILINCFCHMGQITFGF 114
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
K G P+T T N LI K K + + F +Y +I
Sbjct: 115 SVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGV 174
Query: 367 SDMGDAK------------------HMEYT-----------------FEQMHAEGMKADT 391
+GD + M T F +M +G+ AD
Sbjct: 175 CKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADV 234
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
T+ LI G+ G + I + I NV YN ++ A K + E + V
Sbjct: 235 VTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAV 294
Query: 452 MKEKHCRPDSETFSIMTEAY 471
M + +PD T+S + + Y
Sbjct: 295 MLKACVKPDVITYSTLMDGY 314
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 74/192 (38%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P + N IL FA + GI P+ T NILI + SV
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ + K +P + T N +I+ G K + +++ A+G + + ++ LING
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
G I +R NV Y+ +I A K + E ++ M K D T
Sbjct: 177 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236
Query: 464 FSIMTEAYAKEG 475
+S + + EG
Sbjct: 237 YSTLIYGFCIEG 248
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 144/330 (43%), Gaps = 2/330 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY ++ L K+ + + A + ++ G PT Y ALL C+ ++EA L ++
Sbjct: 167 TYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 226
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
C PDV TY++LI R L+++M R + +TV ++ G +AG
Sbjct: 227 VD-NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGK 285
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
Q V M S C PDV T++T++ G++ R ++ G+ P ++
Sbjct: 286 IPQASSVYKTM-TSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYS 344
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
LI K R D ++ M+K + TYN +I+ GD + F++M
Sbjct: 345 ALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEA 404
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G K D T+ L++G+ AG S + NV Y +IS K L +
Sbjct: 405 GCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKA 464
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++ MKE+ C PDS +S + + K G
Sbjct: 465 SLYFQHMKERGCPPDSFVYSSLVDGLCKSG 494
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 132/326 (40%), Gaps = 53/326 (16%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ LGK + A K+F EM G+ YTAL+ + I +A
Sbjct: 233 PDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSV 292
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV--------------- 246
M T C PDV T ST+I A R +++ M+ R +
Sbjct: 293 YKTM-TSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC 351
Query: 247 --------------------TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
TP+T+T NI++ G K+G + MLE A CKPDV
Sbjct: 352 KARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLE-AGCKPDV 410
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
+T N ++S F G D ++ + P T+ LI K+R K S ++
Sbjct: 411 YTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQH 470
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M++ P S Y+++++ G + F++M G+ A+++T LI
Sbjct: 471 MKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRLI-------- 521
Query: 407 FHKVISSVRLASKLQIAENVSFYNAV 432
FH L ++ E VS +NA+
Sbjct: 522 FH-------LCKANRVDEAVSLFNAI 540
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 132/327 (40%), Gaps = 15/327 (4%)
Query: 159 QPELARKVFNEMVEE-GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
+PE A V EM E+ G+ P+ + + +L C++ + A + T C D++T
Sbjct: 109 EPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHF-ETTTTNGCTIDIHT 167
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y+ ++ + + L + + TP T N +L G K G ++ +L ++
Sbjct: 168 YTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV 227
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF------GIDPETRTFNILIGAY 331
++ C PDV T +++ + +R +E ++ F G+ +T + LI
Sbjct: 228 DNG-CTPDVVTYTSLIDGLGKE------KRSFEAYKLFKEMALRGLVLDTVCYTALIRGL 280
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
+ + SSV + M T + +I+ G F+ M A G+ +
Sbjct: 281 LQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNE 340
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
+ LI+G A + + K + YN +I K+ D+ +
Sbjct: 341 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDE 400
Query: 452 MKEKHCRPDSETFSIMTEAYAKEGMND 478
M E C+PD T++I+ + K G D
Sbjct: 401 MLEAGCKPDVYTYNILVSGFCKAGNTD 427
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL++ +K + F P TY L+ L KSG E AR F+EM+E G +P Y L+
Sbjct: 359 ALEMLAQMK-KAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILV 417
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+ +C+ D A + M + +C P+V TY TLI + +Q M ER
Sbjct: 418 SGFCKAGNTDAACGVFDDMSS-SHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGC 476
Query: 247 TPNTVTQNIVLGGYGKAG-------MFDQMERVLSGMLESAT 281
P++ + ++ G K+G +FD+MER SG+ S T
Sbjct: 477 PPDSFVYSSLVDGLCKSGKLEGGCMLFDEMER--SGVANSQT 516
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 172/373 (46%), Gaps = 11/373 (2%)
Query: 125 FQALQVFEMLKEQPFYQPK---------EGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
F+AL + +++ PF K +Y L+ L + G + A KV+ M+ EG+
Sbjct: 164 FKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGL 223
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
+P+ + Y+AL+ A R L +M+TL +P++YTY+ I+ A R +
Sbjct: 224 KPSMKTYSALMVALGRRRDTGTIMDLLEEMETL-GLRPNIYTYTICIRVLGRAGRIDDAY 282
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
+ + M++ P+ VT +++ AG D+ + + + M S+ KPD+ T T++S
Sbjct: 283 GILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSH-KPDLVTYITLMSK 341
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
F N G ++ ++R++ + G P+ T+ IL+ A K D+ +++ MR
Sbjct: 342 FGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPN 401
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
TYN +I ++ F M + G+ ++ I+ Y G K + +
Sbjct: 402 LHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFE 461
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
K I +++ NA + + + + E + ++ + PDS T+++M + Y+K G
Sbjct: 462 KMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAG 521
Query: 476 MNDKVYALEQEKL 488
DK L E L
Sbjct: 522 QIDKATKLLTEML 534
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 166/425 (39%), Gaps = 76/425 (17%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL+V++ + + +P TY L+V LG+ + EM G+ P YT
Sbjct: 210 EALKVYKRMISEGL-KPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTIC 268
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ R ID+A+ L M+ C PDV TY+ LI A A + + + LY M S
Sbjct: 269 IRVLGRAGRIDDAYGILKTMED-EGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASS 327
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ VT ++ +G G + ++R S M E+ PDV T ++ G+VD
Sbjct: 328 HKPDLVTYITLMSKFGNYGDLETVKRFWSEM-EADGYAPDVVTYTILVEALCKSGKVDQA 386
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ R GI P T+N LI R D+ + M L T+ +Y I+
Sbjct: 387 FDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDY 446
Query: 366 FSDMGDAKHMEYTFEQM-----------------------------------HAEGMKAD 390
+ +GD + TFE+M H G+ D
Sbjct: 447 YGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPD 506
Query: 391 TKTFCCLINGYANAGLFHK----------------------VISSVRLASK--------- 419
+ T+ ++ Y+ AG K +I ++ A +
Sbjct: 507 SVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFG 566
Query: 420 ----LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
L++A V YN +I+ K L++ ++ MKE C P++ TF+ + + K
Sbjct: 567 RLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCK-- 624
Query: 476 MNDKV 480
ND V
Sbjct: 625 -NDAV 628
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 145/340 (42%), Gaps = 10/340 (2%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
++P TY+ L+ G G E ++ ++EM +G P YT L+ A C++ +D+AF
Sbjct: 328 HKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAF 387
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L+ M+ + P+++TY+TLI ++ R + L+ +M+ V P + + +
Sbjct: 388 DMLDVMR-VRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDY 446
Query: 260 YGKAG----MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
YGK G D E+ ++ P + N L A G++ + + N
Sbjct: 447 YGKLGDPEKALDTFEK-----MKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNC 501
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G+ P++ T+N+++ Y K DK + ++ M N++I+ G
Sbjct: 502 GLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEA 561
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
F ++ + T+ LI G G K + + N +NA++
Sbjct: 562 WQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDC 621
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
K D + +++ RM +C PD T++ + KEG
Sbjct: 622 LCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEG 661
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 152/348 (43%), Gaps = 8/348 (2%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+K+ A ++F+ + P +Y L+ L E A K+F EM G P
Sbjct: 765 QKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIF 824
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
Y LL A+ ++ IDE F N+M C+P++ T++ +I A V + LY +
Sbjct: 825 TYNLLLDAHGKSKRIDELFELYNEM-LCRGCKPNIITHNIIISALVKSNSINKALDLYYE 883
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
+ +P T ++GG KAG ++ ++ M CKP+ N +++ F G
Sbjct: 884 IISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEM-PDYQCKPNCAIYNILINGFGKAG 942
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
V++ +++ GI P+ +++ IL+ D E ++ + +YN
Sbjct: 943 NVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYN 1002
Query: 361 NVIEAFSDMGDAKHMEYT---FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
+I +G ++ +E F +M G+ + T+ LI + NAG+ +
Sbjct: 1003 LMING---LGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEEL 1059
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ + NV YNA+I K+ + V+K+M C P++ TF+
Sbjct: 1060 QFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFA 1107
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 149/341 (43%), Gaps = 11/341 (3%)
Query: 148 MKLLVLLGKSGQPELARKVFNEMVEE-GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
+ L+ +L K + A+K+F++ + G PTPE Y L+ ++ + A +MK
Sbjct: 756 LPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMK 815
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-- 264
C P+++TY+ L+ A + R + + LY +M R PN +T NI++ K+
Sbjct: 816 N-AGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSI 874
Query: 265 --MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETR 322
D ++SG C T ++ G+ + + +E+ ++ P
Sbjct: 875 NKALDLYYEIISGDFSPTPC-----TYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCA 929
Query: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
+NILI +GK + + + M K +Y ++E G + FE++
Sbjct: 930 IYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEEL 989
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
G+ DT ++ +ING + + +S I+ + YNA+I A +
Sbjct: 990 KLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMV 1049
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ ++++ ++ P+ T++ + ++K G D+ +++
Sbjct: 1050 DQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSV 1090
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 101/439 (23%), Positives = 171/439 (38%), Gaps = 77/439 (17%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A Q+F LK+ P TY L+ LGK G+ A +F M E G P + AL
Sbjct: 560 EAWQMFGRLKDLKL-APTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNAL 618
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L C+N +D A +M T+ NC PDV TY+T+I + R Y M ++
Sbjct: 619 LDCLCKNDAVDLALKMFCRM-TIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM-KKF 676
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQ------------------------MERVL-------- 273
++P+ VT +L G K G + ME +L
Sbjct: 677 LSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEA 736
Query: 274 ----SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF----------------- 312
G++ ++ C+ D + I + K +D ++ ++KF
Sbjct: 737 ISFAEGLVCNSICQDDNLILPLIRVLCKQKKALD-AKKLFDKFTKSLGTHPTPESYNCLM 795
Query: 313 -------------------RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
+N G P T+N+L+ A+GK + D++ + M
Sbjct: 796 DGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCK 855
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
T+N +I A + ++ + T+ LI G AG + +
Sbjct: 856 PNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKI 915
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
Q N + YN +I+ KA ++ ++KRM ++ RPD ++++I+ E
Sbjct: 916 FEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFM 975
Query: 474 EG-MNDKVYALEQEKLQML 491
G ++D V+ E+ KL L
Sbjct: 976 TGRVDDAVHYFEELKLTGL 994
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 141/351 (40%), Gaps = 9/351 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY ++ K+GQ + A K+ EM+ EG EP + +L+ + +DEA+
Sbjct: 505 PDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQM 564
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
++K L P V TY+ LI + L+ M E PNTVT N +L
Sbjct: 565 FGRLKDL-KLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLC 623
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K D ++ M C PDV T NTI+ +G+ +Y + + F
Sbjct: 624 KNDAVDLALKMFCRM-TIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPDHV 682
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+ +L G R+ D + VME++ + ++ + ++E + + E
Sbjct: 683 TLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEG 742
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK----LQIAENVSFYNAVISACI 437
+ + D LI K + + +L K L YN ++ +
Sbjct: 743 LVCNSICQDDNLILPLIRVLCKQ---KKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLL 799
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
+ +++ MK C P+ T++++ +A+ K D+++ L E L
Sbjct: 800 GCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEML 850
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 86/210 (40%), Gaps = 5/210 (2%)
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T N +L G+V+ M ++ + I+ T+ + A K + + M
Sbjct: 124 TCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKM 183
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
R+ F + +YN +I G K +++M +EG+K KT+ L+
Sbjct: 184 RQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDT 243
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
++ + L + N+ Y I +A + + + K M+++ C PD T++++
Sbjct: 244 GTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVL 303
Query: 468 TEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
+A G DK ++L + AS H
Sbjct: 304 IDALCAAGKLDKA-----KELYTKMRASSH 328
>gi|147859909|emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]
Length = 724
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 166/345 (48%), Gaps = 9/345 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
PK T + ++ LG +G+ E A +F E+ E G+ P Y ALL Y + + +A
Sbjct: 360 PKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESI 419
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+++M+ PD +TYS LI A +A R+E + ++M+ V PN+ + +L Y
Sbjct: 420 VSEMER-SGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYR 478
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
G + + +VL M S PD N ++ F +D +++ R G+ P+
Sbjct: 479 DRGKWQKSFQVLREMRNSGV-SPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDA 537
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+N LI + K ++K + E M++ ++TYN +I +F + + ++ +
Sbjct: 538 VTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGK 597
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M ++G+ A+ T+ L GL + I++ R+ + +V N++I+A +
Sbjct: 598 MQSQGLLANVVTYTTL-------GLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRR 650
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
E V + MKE +PD T++ + +A + DKV A+ +E
Sbjct: 651 DAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEE 695
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 147/308 (47%), Gaps = 4/308 (1%)
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE--LIE 235
TP Y AL+ A RN +++A +++M+ D YS +I++ + + +++
Sbjct: 254 TPLTYNALIGACARNDDLEKALNLMSRMRR-DGYPSDFVNYSFIIQSLTRTNKSDSSMLQ 312
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
+Y +++ + + N ++ G+ K+G ++ L+ M++ P T+ +++
Sbjct: 313 KIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLA-MVQGNGLSPKTATLVAVITA 371
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
N G+ + E +E+ + G+ P TR +N L+ Y K S++ M + F
Sbjct: 372 LGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPD 431
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
TY+ +I+A+++ G + ++M A G++ ++ F ++ Y + G + K +R
Sbjct: 432 EHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLR 491
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++ + FYN +I K + L + RM+ + +PD+ T++ + + + K G
Sbjct: 492 EMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSG 551
Query: 476 MNDKVYAL 483
++K L
Sbjct: 552 HHNKAEEL 559
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 122/292 (41%), Gaps = 44/292 (15%)
Query: 136 EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY------ 189
E+ + P E TY L+ +G+ E AR V EM G+ P +++ +LA+Y
Sbjct: 424 ERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKW 483
Query: 190 ---------CRNS--------------------LIDEAFVTLNQMKTLPNCQPDVYTYST 220
RNS +D A T ++M+ + QPD T++T
Sbjct: 484 QKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMR-MEGVQPDAVTWNT 542
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
LI + E L++ M E +P T T NI++ +G+ ++ ++ +L G ++S
Sbjct: 543 LIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLL-GKMQSQ 601
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
+V T T+ G + + R G+ P N LI A+G+ R +
Sbjct: 602 GLLANVVTYTTL-------GLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEA 654
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
SV++YM++ TY +++A + + +E+M G D K
Sbjct: 655 FSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPDRK 706
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 113/307 (36%), Gaps = 42/307 (13%)
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
LY+ L+ A R+ + EAF+ L+Q +TL TY+ LI AC E L
Sbjct: 227 LYSILIHALGRSEKLYEAFL-LSQRQTLTPL-----TYNALIGACARNDDLEKALNLMSR 280
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQ-MERVLSGMLESATCKPDVWTMNTILSVFANK 299
M + V + ++ + D M + + +ES + D +N I+ FA
Sbjct: 281 MRRDGYPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKS 340
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G V+ + + G+ P+T T +I A G
Sbjct: 341 GDVNRAMSFLAMVQGNGLSPKTATLVAVITALG--------------------------- 373
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+ G + E FE++ G+ T+ + L+ GY G S V +
Sbjct: 374 --------NAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMER 425
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ + Y+ +I A A V K M+ RP+S FS + +Y G K
Sbjct: 426 SGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQK 485
Query: 480 VYALEQE 486
+ + +E
Sbjct: 486 SFQVLRE 492
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 177/403 (43%), Gaps = 29/403 (7%)
Query: 76 VSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLK 135
+ E S G+R R +L L R K AL++ +++
Sbjct: 304 IDEMSNEGFRPDRFTFNSLVNGLCRIGHVK--------------------HALEILDVML 343
Query: 136 EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI 195
++ F P TY L+ L K G+ E A ++ N+M+ P Y L++ C+ + +
Sbjct: 344 QEGF-DPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQV 402
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI 255
+EA L ++ T PDV T+++LI+ L L+++M + P+ T N+
Sbjct: 403 EEA-TELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNM 461
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
++ G ++ +L M ES+ C +V T NT++ F +++ E +++
Sbjct: 462 LIDSLCSRGRLEEALSLLKEM-ESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQ 520
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
GI T+N LI K R ++ + +M+ M TYN+++ F GD K
Sbjct: 521 GISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKA 580
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAG---LFHKVISSVRLASKLQIAENVSFYNAV 432
+ M + G + D+ T+ LI G + AG L +++ +V+L + + YN V
Sbjct: 581 ADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQT---YNPV 637
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
I A + E R+++ M EK PD+ T+ ++ G
Sbjct: 638 IKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGG 680
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 175/407 (42%), Gaps = 47/407 (11%)
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
L + + +QP + P Y ++L LGK G R+V EM G E + L+
Sbjct: 89 LDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIE 148
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVT 247
+Y + L DEA ++ M+ + D +TY+ L+ VD + +L+E + M R +
Sbjct: 149 SYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIK 208
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLE--SATCKPDVWTMNTILSVFANKGQVDMM 305
P+ T NI++ +A Q+ + M E S PD T T++ F +G ++
Sbjct: 209 PDVTTFNILIKALCRA---HQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGA 265
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
R E+ G T N+L+ Y K+ +++ S ++ M F T+N+++
Sbjct: 266 LRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNG 325
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-------------------- 405
+G KH + M EG D T+ LI G G
Sbjct: 326 LCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPN 385
Query: 406 --LFHKVISSV-------------RLASKLQIAENVSFYNAVISA-CIKADDLMEMERVY 449
++ +IS++ R+ + I +V +N++I C+ + + ME ++
Sbjct: 386 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAME-LF 444
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
+ MK K C PD T++++ ++ G ++ +L +E +E+SG
Sbjct: 445 EEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKE-----MESSG 486
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 162/381 (42%), Gaps = 35/381 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR---------- 191
P TY ++ L G+ A V +EM G P P +Y +L A CR
Sbjct: 120 PNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRV 179
Query: 192 --------------------NSLIDEAFV--TLNQMKTLPN--CQPDVYTYSTLIKACVD 227
N++ D+ V L+ ++ LP+ C+PDV +Y+ ++K
Sbjct: 180 LEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCM 239
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
A R+ ++ L ++M + PN VT N ++ + G+F+++ VL+ M E C PD+
Sbjct: 240 AKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHG-CTPDIR 298
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
TI+ +G + + + ++G+ P +N L+ +++ ++ M
Sbjct: 299 MYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEM 358
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
P T+N +++ F G + EQM G D T+ +ING+ GL
Sbjct: 359 FDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLI 418
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ + ++ + N Y V+ A+ ++ E + +M ++ C + TF+ +
Sbjct: 419 DEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTL 478
Query: 468 TEAYAKEGMNDKVYALEQEKL 488
K+G+ ++ L ++ L
Sbjct: 479 INFLCKKGLVEQAIELLKQML 499
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 160/391 (40%), Gaps = 38/391 (9%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
+ K+W ++ E + P T+ L+ L ++G E +V +M E G P
Sbjct: 239 MAKRWGCVQELMEEMVRMAC-PPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDI 297
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+Y ++ C+ + A LN+M + +P+V Y+TL+K A R+E E L
Sbjct: 298 RMYATIIDGICKEGHLKVAHEILNRMPSY-GLKPNVVCYNTLLKGLCSAERWEETEELLA 356
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
+M ++ + VT NI++ + + G+ D++ +L ML C PDV T T+++ F +
Sbjct: 357 EMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHG-CMPDVITYTTVINGFCKE 415
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G +D + G P T ++ I++ + +M M + P T+
Sbjct: 416 GLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITF 475
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-------------- 405
N +I G + +QM G D ++ +I+G AG
Sbjct: 476 NTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVN 535
Query: 406 --------LFHKVISSV----RLASKLQIAENVS---------FYNAVISACIKADDLME 444
++ + S++ R+ +Q+ +N+ YNAVIS+ K +
Sbjct: 536 KGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETER 595
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
M C P+ T++I+ A EG
Sbjct: 596 AIEFLAYMVSSGCVPNESTYTILIRGLASEG 626
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 135/310 (43%), Gaps = 11/310 (3%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y A++A YCR ++ A ++ P+ YTY +++A R + +M
Sbjct: 93 YNAMVAGYCRAGQLESA----RRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEM 148
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
R P +++L + G F RVL L + C DV N +L+ ++G
Sbjct: 149 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLED-LHARGCALDVGNCNLVLNAICDQGS 207
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
VD +FG +P+ ++N ++ + + + +ME M ++ P T+N
Sbjct: 208 VDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNT 267
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG---LFHKVISSVRLAS 418
+I G + + QM G D + + +I+G G + H++++ R+ S
Sbjct: 268 LISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILN--RMPS 325
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ NV YN ++ A+ E E + M +K C D TF+I+ + + + G+ D
Sbjct: 326 -YGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVD 384
Query: 479 KVYALEQEKL 488
+V L ++ L
Sbjct: 385 RVIELLEQML 394
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 115/276 (41%), Gaps = 37/276 (13%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
T+ L+ ++G + ++ +M+ G P YT ++ +C+ LIDEA + L M
Sbjct: 369 TFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 428
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
T C+P+ +Y+ ++K A R+ E L M ++ N +T N ++ K G+
Sbjct: 429 -TACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGL 487
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTIL-------------------------------- 293
+Q +L ML + C PD+ + +T++
Sbjct: 488 VEQAIELLKQMLVNG-CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYS 546
Query: 294 ---SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
S + +G+++ + + ++ ++ I + +N +I + K+ ++ + YM
Sbjct: 547 SIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSS 606
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
STY +I + G K + ++ ++G
Sbjct: 607 GCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 154/318 (48%), Gaps = 18/318 (5%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSG-QPELARKVFNEMVEEGIEPTPELYTA 184
+A++VF+ +K P TY ++ GK G + + ++F+ M+ G++P + +
Sbjct: 243 EAIKVFDSMKSNGL-MPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNS 301
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
LLA R L + A + M D++TY+TL+ A + +L + +M +
Sbjct: 302 LLAVCSRGGLWEAARRLFSAMVD-KGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTK 360
Query: 245 SVTPNTVTQNIVLGGYGKAG-------MFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
++ PN VT + ++ GY K G MF++M+ + G+ D + NT+LSV+A
Sbjct: 361 NILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGL--------DRVSYNTLLSVYA 412
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
G+ + ++ N GI + T+N L+ YGK+ YD++ V E M++ +
Sbjct: 413 KLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLL 472
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
TY+ +I+ +S G K F + G+KAD + LI+ GL ++ +
Sbjct: 473 TYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEM 532
Query: 418 SKLQIAENVSFYNAVISA 435
+K I NV YN++I A
Sbjct: 533 TKEGIRPNVVTYNSIIDA 550
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 168/363 (46%), Gaps = 4/363 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLV-LLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+A++ FE + + ++G ++ LG+ G+ ELA+ VF+ ++EG T ++A
Sbjct: 171 KAVRCFEFAVRRESGKNEQGKLASAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSA 230
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV-DAMRFELIETLYQDMDE 243
L++AY R+ +EA + MK+ P++ TY+ +I AC + F+ + ++ M
Sbjct: 231 LISAYGRSGYCNEAIKVFDSMKS-NGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLS 289
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
V P+ +T N +L + G+++ R+ S M++ D++T NT+L GQ+D
Sbjct: 290 NGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGI-DQDIFTYNTLLDAVCKGGQMD 348
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ + I P T++ +I Y K D ++ M+ L +YN ++
Sbjct: 349 LAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLL 408
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
++ +G + ++M G++ D T+ L+ GY + +V + +++
Sbjct: 409 SVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVS 468
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
N+ Y+ +I K E V++ K+ + D +S + +A K G+ + L
Sbjct: 469 PNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTL 528
Query: 484 EQE 486
E
Sbjct: 529 LDE 531
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 147/319 (46%), Gaps = 4/319 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP T+ LL + + G E AR++F+ MV++GI+ Y LL A C+ +D AF
Sbjct: 293 QPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFE 352
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+++M T N P+V TYST+I R + ++ +M V + V+ N +L Y
Sbjct: 353 IMSEMPT-KNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVY 411
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G F+Q V M E+A + DV T N +L+ + + + D + R +E+ + + P
Sbjct: 412 AKLGRFEQALDVCKEM-ENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPN 470
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T++ LI Y K +Y + V ++ Y+ +I+A G + +
Sbjct: 471 LLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLD 530
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA--ENVSFYNAVISACIK 438
+M EG++ + T+ +I+ + + V+ + LQ+ ++ A+ S
Sbjct: 531 EMTKEGIRPNVVTYNSIIDAFGRSASAQCVVDDSGETTALQVESLSSIVVQEAIESQAAD 590
Query: 439 ADDLMEMERVYKRMKEKHC 457
+D +E K EK C
Sbjct: 591 KEDNRIIEIFGKLAAEKAC 609
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 151/312 (48%), Gaps = 6/312 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELAR--KVFNEMVEEGIEPTPELYT 183
+A+++F +K+ +P TY ++ GK G E R ++F+EM+ G++P +
Sbjct: 130 EAIKIFYSMKDYGL-KPNLVTYNAVIDACGKGG-VEFKRVLEIFDEMLRNGMQPDRITFN 187
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
+LLA C + EA +L+ D++TY+TL+ A + ++ + +M
Sbjct: 188 SLLAV-CSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPA 246
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+++ PN VT + ++ GY KAG D + + M + D + NT+LS++A G+ +
Sbjct: 247 KNILPNVVTYSTMIDGYAKAGRLDDARNLFNEM-KFLGISLDRVSYNTLLSIYAKLGRFE 305
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ N GI + T+N L+G YGK+ YD + V E M+ TY+ +I
Sbjct: 306 EAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLI 365
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
+ +S G + F + G+KAD + LI+ GL +S + +K I
Sbjct: 366 DVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 425
Query: 424 ENVSFYNAVISA 435
NV YN++I A
Sbjct: 426 PNVVTYNSIIDA 437
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 140/298 (46%), Gaps = 5/298 (1%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+ L++F EML+ QP T+ LL + K G E AR + EMV GI+ Y
Sbjct: 166 RVLEIFDEMLRNG--MQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNT 223
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
LL A C+ +D AF +++M N P+V TYST+I A R + L+ +M
Sbjct: 224 LLDAVCKGGQLDMAFEIMSEMPA-KNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFL 282
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
++ + V+ N +L Y K G F++ V M E++ + DV T N +L + + + D+
Sbjct: 283 GISLDRVSYNTLLSIYAKLGRFEEAMDVCREM-ENSGIRKDVVTYNALLGGYGKQYKYDV 341
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ + +E+ + + P T++ LI Y K +Y + V +K Y+ +I+
Sbjct: 342 VRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALID 401
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
A G + ++M EG++ + T+ +I+ + V+ S+LQI
Sbjct: 402 ALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPATTESVVDDAGQTSELQI 459
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 162/363 (44%), Gaps = 4/363 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLV-LLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+A+ FE ++ + ++G ++ LG+ G+ E+A+ VF + EG T ++A
Sbjct: 58 KAICCFEFAVKRERKKNEQGKLASAMISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSA 117
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV-DAMRFELIETLYQDMDE 243
+++AY R+ +EA MK +P++ TY+ +I AC + F+ + ++ +M
Sbjct: 118 IISAYGRSGYCNEAIKIFYSMKDY-GLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLR 176
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+ P+ +T N +L K G+++ R LS + + D++T NT+L GQ+D
Sbjct: 177 NGMQPDRITFNSLLAVCSKGGLWEA-ARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLD 235
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
M + I P T++ +I Y K D ++ M+ L +YN ++
Sbjct: 236 MAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLL 295
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
++ +G + +M G++ D T+ L+ GY + V ++
Sbjct: 296 SIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVS 355
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
N+ Y+ +I K E V++ K+ + D +S + +A K G+ + +L
Sbjct: 356 PNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSL 415
Query: 484 EQE 486
E
Sbjct: 416 LDE 418
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 151/347 (43%), Gaps = 24/347 (6%)
Query: 114 TFSDHVLKKQWFQALQVFEMLKEQPFYQ--PKEGTYMKLLVLLGKSGQPELARKVFNEMV 171
T D V K Q FE++ E P P TY ++ K+G+ + AR +FNEM
Sbjct: 223 TLLDAVCKGG--QLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMK 280
Query: 172 EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRF 231
GI Y LL+ Y + +EA +M+ + DV TY+ L+ ++
Sbjct: 281 FLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMEN-SGIRKDVVTYNALLGGYGKQYKY 339
Query: 232 ELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNT 291
+++ ++++M R V+PN +T + ++ Y K G++ + V + A K DV +
Sbjct: 340 DVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFR-EFKKAGLKADVVLYSA 398
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
++ G V+ ++ GI P T+N +I A+G+ + + +LQ
Sbjct: 399 LIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPATTESVVDDAGQTSELQ 458
Query: 352 F-PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE----GMKADTKTFCCLINGYANAGL 406
+SS ++ + + F Q+ AE + + C++ G+
Sbjct: 459 IDSLSSSAVEKATKSLVADREDNRIIKIFGQLAAEKAGQAKNSGGQEMMCIL------GV 512
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
FHK+ +L+I NV ++A+++AC + + E + + ++
Sbjct: 513 FHKM-------HELEIKPNVVTFSAILNACSRCNSFEEASMLLEELR 552
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 156/334 (46%), Gaps = 3/334 (0%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
LG+ G+ ELA+ VF + EG T ++AL++AY ++ DEA MK + +P
Sbjct: 197 LGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMK-VSGLKP 255
Query: 214 DVYTYSTLIKACV-DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
++ TY+ +I AC + F+ + ++++M V P+ +T N +L + G+++ +
Sbjct: 256 NLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNL 315
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
+ M++ DV+T NT+L GQ+D+ + I P T++ + Y
Sbjct: 316 FNEMIDRGI-DQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYA 374
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K + ++ M+ L +YN ++ ++ +G + ++M + G+K D
Sbjct: 375 KAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVV 434
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
T+ L++GY G F++V + K ++ N+ Y+ +I K E V++
Sbjct: 435 TYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREF 494
Query: 453 KEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
K+ + D +S + A K G+ D L E
Sbjct: 495 KQAGLKADVVLYSELINALCKNGLVDSAVLLLDE 528
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 177/396 (44%), Gaps = 40/396 (10%)
Query: 126 QALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+ +++FE ML+ QP TY LL + + G E AR +FNEM++ GI+ Y
Sbjct: 276 RVVEIFEEMLRNG--VQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNT 333
Query: 185 LLAAYCRNSLIDEAFVTLNQM---KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
LL A C+ +D A+ + +M K LPN V TYST+ A R E LY +M
Sbjct: 334 LLDAVCKGGQMDLAYEIMLEMPGKKILPN----VVTYSTMADGYAKAGRLEDALNLYNEM 389
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ + V+ N +L Y K G F+ +V M S+ K DV T N +L + +G+
Sbjct: 390 KFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEM-GSSGVKKDVVTYNALLDGYGKQGK 448
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ + R +++ + + P T++ LI Y K +Y++ V ++ Y+
Sbjct: 449 FNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSE 508
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+I A G ++M EG++ + T+ +I+ + + ++ V +++ Q
Sbjct: 509 LINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLVDGVGASNERQ 568
Query: 422 -------IAENVS-------------FYNAVIS--------ACIKADDLMEMERVYKRMK 453
+ E V FY ++S + +++ + V+K+M
Sbjct: 569 SESPTFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKERLGKEEIRSILSVFKKMH 628
Query: 454 EKHCRPDSETFSIMTEAYAK-EGMNDKVYALEQEKL 488
E +P+ TFS + A ++ + + D LE+ +L
Sbjct: 629 ELEIKPNVVTFSAILNACSRCKSIEDASMLLEELRL 664
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 1/187 (0%)
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
+ ++S G+V++ + +E + G F+ LI AYGK +D+ V E M+
Sbjct: 191 SAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKV 250
Query: 350 LQFPWTSSTYNNVIEAFSDMG-DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
TYN VI+A G + K + FE+M G++ D T+ L+ + GL+
Sbjct: 251 SGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWE 310
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ I ++V YN ++ A K + + M K P+ T+S M
Sbjct: 311 AARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMA 370
Query: 469 EAYAKEG 475
+ YAK G
Sbjct: 371 DGYAKAG 377
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 156/334 (46%), Gaps = 3/334 (0%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
LG+ G+ ELA+ VF + EG T ++AL++AY ++ DEA MK + +P
Sbjct: 197 LGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMK-VSGLKP 255
Query: 214 DVYTYSTLIKACV-DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
++ TY+ +I AC + F+ + ++++M V P+ +T N +L + G+++ +
Sbjct: 256 NLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNL 315
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
+ M++ DV+T NT+L GQ+D+ + I P T++ + Y
Sbjct: 316 FNEMIDRGI-DQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYA 374
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K + ++ M+ L +YN ++ ++ +G + ++M + G+K D
Sbjct: 375 KAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVV 434
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
T+ L++GY G F++V + K ++ N+ Y+ +I K E V++
Sbjct: 435 TYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREF 494
Query: 453 KEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
K+ + D +S + A K G+ D L E
Sbjct: 495 KQAGLKADVVLYSELINALCKNGLVDSAVLLLDE 528
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 177/396 (44%), Gaps = 40/396 (10%)
Query: 126 QALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+ +++FE ML+ QP TY LL + + G E AR +FNEM++ GI+ Y
Sbjct: 276 RVVEIFEEMLRNG--VQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNT 333
Query: 185 LLAAYCRNSLIDEAFVTLNQM---KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
LL A C+ +D A+ + +M K LPN V TYST+ A R E LY +M
Sbjct: 334 LLDAVCKGGQMDLAYEIMLEMPGKKILPN----VVTYSTMADGYAKAGRLEDALNLYNEM 389
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ + V+ N +L Y K G F+ +V M S+ K DV T N +L + +G+
Sbjct: 390 KFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEM-GSSGVKKDVVTYNALLDGYGKQGK 448
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ + R +++ + + P T++ LI Y K +Y++ V ++ Y+
Sbjct: 449 FNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSE 508
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+I A G ++M EG++ + T+ +I+ + + ++ V +++ Q
Sbjct: 509 LINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLVDGVGASNERQ 568
Query: 422 -------IAENVS-------------FYNAVISA--------CIKADDLMEMERVYKRMK 453
+ E V FY ++S + +++ + V+K+M
Sbjct: 569 SESPSFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKERLGKEEIRSILSVFKKMH 628
Query: 454 EKHCRPDSETFSIMTEAYAK-EGMNDKVYALEQEKL 488
E +P+ TFS + A ++ + + D LE+ +L
Sbjct: 629 ELEIKPNVVTFSAILNACSRCKSIEDASMLLEELRL 664
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 1/187 (0%)
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
+ ++S G+V++ + +E + G F+ LI AYGK +D+ V E M+
Sbjct: 191 SAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKV 250
Query: 350 LQFPWTSSTYNNVIEAFSDMG-DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
TYN VI+A G + K + FE+M G++ D T+ L+ + GL+
Sbjct: 251 SGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWE 310
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ I ++V YN ++ A K + + M K P+ T+S M
Sbjct: 311 AARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMA 370
Query: 469 EAYAKEG 475
+ YAK G
Sbjct: 371 DGYAKAG 377
>gi|302794005|ref|XP_002978767.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
gi|300153576|gb|EFJ20214.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
Length = 521
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 150/303 (49%), Gaps = 8/303 (2%)
Query: 118 HVLK--KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
HVL+ K++ +A +F L E+ +P TY +++V+ GK+G+P A ++ M
Sbjct: 182 HVLEDAKEYRRAEALFRDL-EKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMC 240
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
P +TAL+ A+ R L EA ++++ + +PD Y Y+ L++A
Sbjct: 241 PPNICTFTALMNAFARQGLYREAERYFDKLQEF-DYKPDHYAYNALMEAYSQGGSPAGAL 299
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
++Q M P+TV+ NI++ YG+AG+++ E++ M +SA P++ + +LS
Sbjct: 300 EIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSM-QSAGFSPNLKSNMLLLSA 358
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
+A G+V+ E G P+T +N LI AYG ++ M +++ M K T
Sbjct: 359 YARAGRVEEAEELVSAMERDGTKPDTLIYNALINAYGVSGRHEDMEALLAKMVKSSSKQT 418
Query: 356 S---STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVIS 412
TYN +I+ ++ G E F+ + + D T+ L+ GYA L+ K S
Sbjct: 419 KPDIGTYNTLIQVYAQAGFIPKAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTS 478
Query: 413 SVR 415
++
Sbjct: 479 ILK 481
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 171/380 (45%), Gaps = 9/380 (2%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K W + Q+ E + + ++P G Y L+ GKS E A K FN M E P E
Sbjct: 82 KDWPRVTQMCEWVLQGTAFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEET 141
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+ L+ Y ++A QM+ P +T + DA + E L++D+
Sbjct: 142 FGVLINGYRLAGSFEKAEELFVQMQK-RGYSPGPLACNTFLHVLEDAKEYRRAEALFRDL 200
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
++ PN T N ++ YGKAG + E + M A C P++ T +++ FA +G
Sbjct: 201 EKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSM-RRAMCPPNICTFTALMNAFARQGL 259
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM-RKLQFPWTSSTYN 360
ER+++K + F P+ +N L+ AY + + + M R FP T S +N
Sbjct: 260 YREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVS-HN 318
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+I A+ G + E F+ M + G + K+ L++ YA AG + V +
Sbjct: 319 ILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERD 378
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRM---KEKHCRPDSETFSIMTEAYAKEGMN 477
+ YNA+I+A + +ME + +M K +PD T++ + + YA+ G
Sbjct: 379 GTKPDTLIYNALINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFI 438
Query: 478 DKVYALEQ--EKLQMLLEAS 495
K L Q +L+++ +A+
Sbjct: 439 PKAEELFQGLARLKLVPDAT 458
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 112/228 (49%), Gaps = 10/228 (4%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
+++F LQ F+ Y+P Y L+ + G P A ++F M G P
Sbjct: 264 ERYFDKLQEFD-------YKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVS 316
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+ L+ AY R L ++A M++ P++ + L+ A A R E E L M
Sbjct: 317 HNILINAYGRAGLYEDAEKIFKSMQS-AGFSPNLKSNMLLLSAYARAGRVEEAEELVSAM 375
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT--CKPDVWTMNTILSVFANK 299
+ P+T+ N ++ YG +G + ME +L+ M++S++ KPD+ T NT++ V+A
Sbjct: 376 ERDGTKPDTLIYNALINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQA 435
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
G + E ++ + P+ T+ L+G Y KK++Y K +S+++ M
Sbjct: 436 GFIPKAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILKKM 483
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 91/190 (47%), Gaps = 4/190 (2%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A ++F+ ++ F P + M LL ++G+ E A ++ + M +G +P +Y AL+
Sbjct: 333 AEKIFKSMQSAGF-SPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNALI 391
Query: 187 AAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
AY + ++ L +M + +PD+ TY+TLI+ A E L+Q +
Sbjct: 392 NAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPKAEELFQGLARL 451
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ P+ T ++GGY K ++ + +L MLES C+ D T + S + QV+
Sbjct: 452 KLVPDATTWTALMGGYAKKKLYRKCTSILKKMLESG-CRADAVTARVLFSACRSPEQVEQ 510
Query: 305 MERWYEKFRN 314
+ + E +
Sbjct: 511 VTQLMESLQG 520
>gi|356517404|ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 696
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 169/379 (44%), Gaps = 35/379 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
PK T + +++ LG SG+ A +F E+ E G EP Y ALL Y + + +A
Sbjct: 290 PKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFV 349
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+++M+ +PD TYS LI A A R+E + ++M+ +V PN+ + +L Y
Sbjct: 350 VSEMEK-AGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYR 408
Query: 262 KAGMFDQMERVLSGM----------------------------------LESATCKPDVW 287
G + + +VL M + S +PD
Sbjct: 409 DKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTV 468
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T NT+++ G+ +M E + + + G P T+NI+I + G+++ ++++S + M
Sbjct: 469 TWNTLINCHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKM 528
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
+ S TY +++ + G E + + G K + + LIN YA GL
Sbjct: 529 QSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLS 588
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+++ RL + + ++ N++I+A + E V + MKE + PD T++ +
Sbjct: 589 ELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTL 648
Query: 468 TEAYAKEGMNDKVYALEQE 486
+A + KV A+ +E
Sbjct: 649 MKALIRVEKFQKVPAVYEE 667
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 154/341 (45%), Gaps = 14/341 (4%)
Query: 136 EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI 195
E+ +P E TY L+ +G+ E AR V EM +EP +Y+ +LA+Y
Sbjct: 354 EKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEW 413
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIKA-----CVD-AMRFELIETLYQDMDERSVTPN 249
++F L MK+ QPD + Y+ +I C+D AM ++ M + P+
Sbjct: 414 QKSFQVLKDMKS-NGVQPDRHFYNVMIDTFGKYNCLDHAM------ATFERMLSEGIRPD 466
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
TVT N ++ + K+G + E L G ++ P + T N +++ + + + + +
Sbjct: 467 TVTWNTLINCHCKSGRHNMAEE-LFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFL 525
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
K ++ G+ P + T+ L+ YGK + +E ++ F TS+ YN +I A++
Sbjct: 526 SKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQR 585
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFY 429
G ++ F M EG+ LIN + + + ++ + I +V Y
Sbjct: 586 GLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTY 645
Query: 430 NAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
++ A I+ + ++ VY+ M C PD + +++ A
Sbjct: 646 TTLMKALIRVEKFQKVPAVYEEMVTSGCTPDRKARAMLRSA 686
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 140/303 (46%), Gaps = 4/303 (1%)
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE--LIE 235
TP Y AL+ A RN +++A +++M+ QPD YS++I+ + + + +++
Sbjct: 184 TPLTYNALIGACARNGDVEKALNLMSKMRR-DGYQPDFVNYSSIIQYLTRSNKIDSPILQ 242
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
LY +++ + + N ++ G+ KAG + R L+ M +S P T+ ++
Sbjct: 243 KLYTEIETDKIEIDGHLMNDIILGFSKAGDPTRAMRFLA-MAQSNGLNPKPSTLVAVILA 301
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
N G+ E +E+ R G +P TR +N L+ Y K V+ M K
Sbjct: 302 LGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPD 361
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
TY+ +I+A++ G + ++M A ++ ++ + ++ Y + G + K ++
Sbjct: 362 EQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLK 421
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + FYN +I K + L ++RM + RPD+ T++ + + K G
Sbjct: 422 DMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSG 481
Query: 476 MND 478
++
Sbjct: 482 RHN 484
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 145/339 (42%), Gaps = 9/339 (2%)
Query: 144 EGTYMKLLVL-LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTL 202
+G M ++L K+G P A + G+ P P A++ A + EA
Sbjct: 256 DGHLMNDIILGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALF 315
Query: 203 NQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGK 262
+++ +P Y+ L+K V + E + +M++ V P+ T ++++ Y
Sbjct: 316 EEIRE-NGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAH 374
Query: 263 AGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETR 322
AG ++ VL M E++ +P+ + + IL+ + +KG+ + + ++ G+ P+
Sbjct: 375 AGRWESARIVLKEM-EASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRH 433
Query: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
+N++I +GK D + E M + T+N +I G E F +M
Sbjct: 434 FYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEM 493
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKA 439
G T+ +IN + +V S+ L SK+Q + N Y ++ K+
Sbjct: 494 QQRGYSPCITTYNIMINSMGEQQRWEQV--SLFL-SKMQSQGLLPNSITYTTLVDVYGKS 550
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ + +K +P S ++ + AYA+ G+++
Sbjct: 551 GRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSE 589
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 37/164 (22%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+++W Q ++ Q P TY L+ + GKSG+ A + + G +PT
Sbjct: 515 QQRWEQVSLFLSKMQSQGLL-PNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTST 573
Query: 181 LYTALLAAYCR--------------------------NSLID---------EAFVTLNQM 205
+Y AL+ AY + NSLI+ EAF L M
Sbjct: 574 MYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYM 633
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
K N +PDV TY+TL+KA + +F+ + +Y++M TP+
Sbjct: 634 KE-NNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVTSGCTPD 676
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 145/336 (43%), Gaps = 6/336 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L KS + A + +M+E G P Y L+ +C+ +DEA V
Sbjct: 100 PSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVL 159
Query: 202 LNQMKTLPN-CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
NQM L N C PDV+TY+ LI R + L Q+M + PN +T N ++
Sbjct: 160 FNQM--LENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSL 217
Query: 261 GKAGMF-DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K+G + D L+ M+ CKP +T N ++ +F GQ+D+ ++ + G P
Sbjct: 218 VKSGKYIDAFN--LAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLP 275
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ T+NI+I + D ++E M + P TYN+++ +
Sbjct: 276 DIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVY 335
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
E + G D T LI+G + +R + A +V Y +I KA
Sbjct: 336 EVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKA 395
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
D L + + M +K C P T+SI+ + K
Sbjct: 396 DQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSA 431
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 163/373 (43%), Gaps = 10/373 (2%)
Query: 126 QALQVFEMLKEQ--PFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
+A + +++ K P TY L+ K+ + A ++ +EM + GI P +Y
Sbjct: 13 KAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYN 72
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
++ C N +D A V M+ +C P V TY+ L+ A + R + +DM E
Sbjct: 73 TIIKGLCDNGRVDSALVHYRDMQR--HCAPSVITYTILVDALCKSARISDASLILEDMIE 130
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
PN VT N ++ G+ K G D+ + + MLE+ +C PDV+T N ++ + + +
Sbjct: 131 AGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLEN-SCSPDVFTYNILIDGYCKQERPQ 189
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ ++ +G +P T+N L+ + K Y ++ + M + + T+N +I
Sbjct: 190 DGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMI 249
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
+ F +G F+ M G D T+ +I+G A + ++
Sbjct: 250 DMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCP 309
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+V YN+++S KA + E VY+ ++ D T S + + K D
Sbjct: 310 PDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLD----- 364
Query: 484 EQEKLQMLLEASG 496
+ EKL +E +G
Sbjct: 365 DAEKLLREMERNG 377
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 139/338 (41%), Gaps = 48/338 (14%)
Query: 184 ALLAAYCRNSLIDEAFVTL-NQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
LL+A+ R EA+ N + L C PD TYSTLI A F+ L +M+
Sbjct: 3 CLLSAFVRKKKAQEAYDLFKNHLCGL--CSPDSITYSTLINGFCKARDFQQAYRLLDEME 60
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFD-------QMER------------------------ 271
+R + P+ N ++ G G D M+R
Sbjct: 61 KRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISD 120
Query: 272 ---VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
+L M+E A C P+V T NT+++ F G +D + + P+ T+NILI
Sbjct: 121 ASLILEDMIE-AGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILI 179
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME-YTFEQMHAEGM 387
Y K+ + +++ M K TYN ++++ G K+++ + QM +
Sbjct: 180 DGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSG--KYIDAFNLAQMM---L 234
Query: 388 KADTK----TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
+ D K TF +I+ + G +L + ++ YN +IS +A+ +
Sbjct: 235 RRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRID 294
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
+ ++ +RM E C PD T++ + K D+ Y
Sbjct: 295 DARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAY 332
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 116/250 (46%), Gaps = 6/250 (2%)
Query: 81 IPGYRSKRTPIKNLKKKLERKAKAKAWVNTVA-ETFSDHVLKK-QWFQALQVFEMLKEQP 138
I GY + P ++ K L+ K N + T D ++K ++ A + +M+ +
Sbjct: 179 IDGYCKQERP-QDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD 237
Query: 139 FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA 198
+P T+ ++ + K GQ +LA ++F M + G P Y +++ CR + ID+A
Sbjct: 238 C-KPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDA 296
Query: 199 FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
L +M T C PDV TY++++ A + + +Y+ + + VT + ++
Sbjct: 297 RQLLERM-TEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLID 355
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
G K+ D E++L M + + PDV ++ F Q+D ++ + + G
Sbjct: 356 GLCKSRRLDDAEKLLREMERNGS-APDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCV 414
Query: 319 PETRTFNILI 328
P T++I+I
Sbjct: 415 PTVITYSIVI 424
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 185/417 (44%), Gaps = 60/417 (14%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A +V +++E+ +P T+ ++ L K+G+ E ARKVF+EMV EG+ P Y LL
Sbjct: 64 AERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLL 123
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER-- 244
+ YC+ + E+ ++M T PDV T+++LI A A E L M ER
Sbjct: 124 SGYCKVGCLHESLAVFSEM-TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 182
Query: 245 ---------------------------------SVTPNTVTQNIVLGGYGKAGMFDQMER 271
+ P+ V N ++ GY K G D + R
Sbjct: 183 RMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD-LAR 241
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
L +E+ KPDV T +TI+S + G +D + +K G+ P+ T++ LI
Sbjct: 242 ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 301
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
+++ + + E M +L TY +I+ G+ + ++M +G+ D
Sbjct: 302 CEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDV 361
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKL----QIAENVSFYNAVISACIKAD------- 440
T+ LING + + + + RL KL + +N+ Y+A++ C KA+
Sbjct: 362 VTYSVLINGLSKSA---RTKEAHRLLFKLYHEDPVPDNIK-YDALMLCCSKAEFKSVVAL 417
Query: 441 -------DLM-EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
LM E ++VY+ M +++ + D +SI+ + + G K + ++ L+
Sbjct: 418 LKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLR 474
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 151/348 (43%), Gaps = 1/348 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L G+ E A V +M G P Y L+AA+CR +D A
Sbjct: 8 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 67
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
++ M+ N +P++ T+++++ A R E ++ +M + P+ V+ N +L GY
Sbjct: 68 VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC 127
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G + V S M + PDV T +++ G ++ + R G+
Sbjct: 128 KVGCLHESLAVFSEMTQRGLV-PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNE 186
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
TF LI + KK D +E MRK + YN +I + +G +
Sbjct: 187 VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIRE 246
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M A+ +K D T+ +I+GY G + K + + Y+++I +
Sbjct: 247 MEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKR 306
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
L + +++ M + +PD T++ + + + KEG +K +L E ++
Sbjct: 307 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIR 354
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 139/322 (43%), Gaps = 3/322 (0%)
Query: 170 MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM 229
MV G+ P Y L+ A C ++EA + M+ C P+ TY+TL+ A A
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRG-AGCAPNAVTYNTLVAAFCRAG 59
Query: 230 RFELIETLYQDM-DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
+ E + M +E + PN VT N ++ G KAG + +V M+ PDV +
Sbjct: 60 ELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGL-APDVVS 118
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
NT+LS + G + + + G+ P+ TF LI A K ++ +++ MR
Sbjct: 119 YNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR 178
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
+ T+ +I+ F G E+M G++ + LINGY G
Sbjct: 179 ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD 238
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+R ++ +V Y+ +IS K +L ++ ++M +K PD+ T+S +
Sbjct: 239 LARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLI 298
Query: 469 EAYAKEGMNDKVYALEQEKLQM 490
+E + L + LQ+
Sbjct: 299 RGLCEEKRLNDACELFENMLQL 320
>gi|302826107|ref|XP_002994593.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
gi|300137364|gb|EFJ04344.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
Length = 521
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 156/324 (48%), Gaps = 8/324 (2%)
Query: 118 HVLK--KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
HVL+ K++ +A +F L E+ +P TY +++V+ GK+G+P A ++ M
Sbjct: 182 HVLEDAKEYRRAEALFRDL-EKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMC 240
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
P +TAL+ A+ R L EA ++++ + +PD Y Y+ L++A
Sbjct: 241 PPNICTFTALMNAFARQGLYREAERYFDKLQEF-DYKPDHYAYNALMEAYSQGGSPAGAL 299
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
++Q M P+TV+ NI++ YG+AG+++ E++ M +SA P++ + +LS
Sbjct: 300 EIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSM-QSAGFSPNLKSNMLLLSA 358
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
+A G+V+ E G P+T +N LI AYG ++ M +++ M K T
Sbjct: 359 YARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQT 418
Query: 356 S---STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVIS 412
TYN +I+ ++ G E F+ + + D T+ L+ GYA L+ K S
Sbjct: 419 KPDIGTYNTLIQVYAQAGFIPRAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTS 478
Query: 413 SVRLASKLQIAENVSFYNAVISAC 436
++ + + + SAC
Sbjct: 479 ILKKMLESGCRADAVTARVLFSAC 502
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 171/380 (45%), Gaps = 9/380 (2%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K W + Q+ E + + ++P G Y L+ GKS E A K FN M E P E
Sbjct: 82 KDWPRVTQMCEWVLQGTTFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEET 141
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+ L+ Y ++A QM+ P +T + DA + E L++D+
Sbjct: 142 FGVLINGYRLAGSFEKAEELFVQMQK-RGYSPGPLACNTFLHVLEDAKEYRRAEALFRDL 200
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
++ PN T N ++ YGKAG + E + M A C P++ T +++ FA +G
Sbjct: 201 EKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSM-RRAMCPPNICTFTALMNAFARQGL 259
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM-RKLQFPWTSSTYN 360
ER+++K + F P+ +N L+ AY + + + M R FP T S +N
Sbjct: 260 YREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVS-HN 318
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+I A+ G + E F+ M + G + K+ L++ YA AG + V +
Sbjct: 319 ILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERD 378
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRM---KEKHCRPDSETFSIMTEAYAKEGMN 477
+ YN++I+A + +ME + +M K +PD T++ + + YA+ G
Sbjct: 379 GTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFI 438
Query: 478 DKVYALEQ--EKLQMLLEAS 495
+ L Q +L+++ +A+
Sbjct: 439 PRAEELFQGLARLKLVPDAT 458
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 91/190 (47%), Gaps = 4/190 (2%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A ++F+ ++ F P + M LL ++G+ E A ++ + M +G +P +Y +L+
Sbjct: 333 AEKIFKSMQSAGF-SPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLI 391
Query: 187 AAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
AY + ++ L +M + +PD+ TY+TLI+ A E L+Q +
Sbjct: 392 NAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPRAEELFQGLARL 451
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ P+ T ++GGY K ++ + +L MLES C+ D T + S + QV+
Sbjct: 452 KLVPDATTWTALMGGYAKKKLYRKCTSILKKMLESG-CRADAVTARVLFSACRSPEQVEQ 510
Query: 305 MERWYEKFRN 314
+ + E +
Sbjct: 511 VTQLMESLQG 520
>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 669
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 166/360 (46%), Gaps = 16/360 (4%)
Query: 122 KQWFQALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
KQW +A ++ E M++ P E T+ + ++G + A ++ M G P
Sbjct: 224 KQWEKAEELMEEMIRNN--CHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVV 281
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
+Y+ L+ + +D+A V LN M C+P+ Y+ +K A R++ + L +
Sbjct: 282 IYSTLVNGFSEQGRVDDALVLLNTML----CKPNTVCYNAALKGLCMAERWKDVGELIAE 337
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M + PN T +++ + G+ D V+ M + C+PDV NT+++ F+ +G
Sbjct: 338 MVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQM-QKYGCRPDVVIYNTLINYFSEQG 396
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTY 359
+VD + +P+T +FN + A + +R YD + + +R+ P T+
Sbjct: 397 RVDDALMLLDSML---CNPDTISFNAALKALCRTERWYDVEELIAQMLRE-DCPLIEMTF 452
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
N +I++ G H FEQM D T+ LING++ GL V S++ L
Sbjct: 453 NILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGL---VESAIELFQS 509
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ ++ YNAV+ +A + + M K C P+ TF+I+ + ++G D+
Sbjct: 510 MPCKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADR 569
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 147/335 (43%), Gaps = 13/335 (3%)
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
+ EM+++ P E T+ L L + G + A +V +M + G P +Y L+ +
Sbjct: 335 IAEMVRKD--CPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYF 392
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
+D+A + L+ M C PD +++ +KA R+ +E L M
Sbjct: 393 SEQGRVDDALMLLDSML----CNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLI 448
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
+T NI++ + G+ + V M C PD+ T +++++ F+ +G ++E
Sbjct: 449 EMTFNILIDSLCQHGLVNHAIEVFEQM-PKYRCTPDIVTYSSLINGFSEQG---LVESAI 504
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
E F++ P+ ++N ++ + ++ ++ M + P T+N +I +
Sbjct: 505 ELFQSMPCKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQK 564
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFY 429
G A F+QM G D T+ LING++ G ++ ++ L S + + Y
Sbjct: 565 GFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQG---RLDDALNLLSTMSCKPDAISY 621
Query: 430 NAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
N+ + +A+ E E + M K C P+ TF
Sbjct: 622 NSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVTF 656
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 14/306 (4%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
YTAL+ YCR+ + +A LN + ++P PD YTY+T++K A ++E E L ++M
Sbjct: 181 YTALINGYCRSGRLADA---LNLIASMP-VAPDTYTYNTVLKGLCGAKQWEKAEELMEEM 236
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ PN VT + + + G+ D ++L M C PDV +T+++ F+ +G+
Sbjct: 237 IRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYG-CTPDVVIYSTLVNGFSEQGR 295
Query: 302 VDMMERWYEKFRNFGIDPETRTFN-ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
VD P T +N L G +R D + E +RK P +T++
Sbjct: 296 VD---DALVLLNTMLCKPNTVCYNAALKGLCMAERWKDVGELIAEMVRK-DCPPNEATFS 351
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+ G EQM G + D + LIN ++ G + + L S L
Sbjct: 352 MLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDAL--MLLDSML 409
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM-NDK 479
+ +SF NA + A + + ++E + +M + C TF+I+ ++ + G+ N
Sbjct: 410 CNPDTISF-NAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHA 468
Query: 480 VYALEQ 485
+ EQ
Sbjct: 469 IEVFEQ 474
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 109/266 (40%), Gaps = 9/266 (3%)
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
P V + LIK R E + + E S + + V+ N ++ GY + G ERV
Sbjct: 108 PAVIACNILIKKLCAHRRLADAERVLDALKE-SGSADAVSHNTLVAGYCRDGRLADAERV 166
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
L S +V T +++ + G+ + + + P+T T+N ++
Sbjct: 167 LEAAKVSGA--ANVVTYTALINGYCRSGR---LADALNLIASMPVAPDTYTYNTVLKGLC 221
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
+ ++K +ME M + T+ I +F G H E+M G D
Sbjct: 222 GAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVV 281
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
+ L+NG++ G +V ++ L + + N YNA + A+ ++ + M
Sbjct: 282 IYSTLVNGFSEQG---RVDDALVLLNTMLCKPNTVCYNAALKGLCMAERWKDVGELIAEM 338
Query: 453 KEKHCRPDSETFSIMTEAYAKEGMND 478
K C P+ TFS++T + G+ D
Sbjct: 339 VRKDCPPNEATFSMLTSCLCQHGLVD 364
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 108/240 (45%), Gaps = 13/240 (5%)
Query: 122 KQWFQALQVF-EMLKEQ-PFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
++W+ ++ +ML+E P E T+ L+ L + G A +VF +M + P
Sbjct: 428 ERWYDVEELIAQMLREDCPLI---EMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDI 484
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
Y++L+ + L++ A M C+PD+++Y+ ++K A R+E L
Sbjct: 485 VTYSSLINGFSEQGLVESAIELFQSMP----CKPDIFSYNAVLKGLCRAARWEDAGELIA 540
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
+M + PN +T NI++ + G D+ V M E + PD++T N +++ F+ +
Sbjct: 541 NMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYGS-TPDIFTYNALINGFSEQ 599
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G++D P+ ++N + + + + ++ M + + P T+
Sbjct: 600 GRLD---DALNLLSTMSCKPDAISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVTF 656
>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 169/374 (45%), Gaps = 24/374 (6%)
Query: 117 DHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMV-EEGI 175
DHVL ++F +L+ P E T+ +L +L K + + A+ + ++ I
Sbjct: 55 DHVLSLEFFNSLKTL-----NPISLTLE-THSIILHILTKKSKFKSAQSILRTLLASRSI 108
Query: 176 EPTPELYTALLAAY--CRNS--LIDEAFVTLNQMKTLPNCQ------------PDVYTYS 219
+ +L+ LL +Y C +S + D F T M N P V + +
Sbjct: 109 DLPGKLFDTLLFSYRMCDSSPRVFDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCN 168
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
+ + +D R ++ T Y++M ++PN+ T N+VL K+G ++ VL M ES
Sbjct: 169 AYLSSLLDFHRVDIALTFYREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREM-ES 227
Query: 280 ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
P+V + NT+++ NKG + + + G++P TFN LI + K+ +
Sbjct: 228 VGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHE 287
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+ M+ + + TYN +I + +G++ +E+M G+KAD T+ LI
Sbjct: 288 ANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALIL 347
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
G G K V+ K + N S Y+A+IS + ++YK M C P
Sbjct: 348 GLCKEGKTKKAAFLVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHP 407
Query: 460 DSETFSIMTEAYAK 473
+ +TF ++T A+ K
Sbjct: 408 NEQTFKMLTSAFVK 421
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 82/203 (40%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P V + N LS + +VD+ +Y + R I P + TFN+++ A K +K V
Sbjct: 162 PTVESCNAYLSSLLDFHRVDIALTFYREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEV 221
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ M + +YN +I + G M G++ + TF LI+G+
Sbjct: 222 LREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCK 281
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
G H+ + + N YN +I+ + + +VY+ M + D T
Sbjct: 282 EGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILT 341
Query: 464 FSIMTEAYAKEGMNDKVYALEQE 486
++ + KEG K L +E
Sbjct: 342 YNALILGLCKEGKTKKAAFLVKE 364
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 95/250 (38%), Gaps = 20/250 (8%)
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESAT-----------------CKPDVWTMNTILS 294
T +I+L K F + +L +L S + C +++
Sbjct: 78 THSIILHILTKKSKFKSAQSILRTLLASRSIDLPGKLFDTLLFSYRMCDSSPRVFDSLFK 137
Query: 295 VFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 354
+A+ + + + +++G P + N + + D + MR+ +
Sbjct: 138 TYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIALTFYREMRRCRISP 197
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
S T+N V+ A G + +M + G+ + ++ LI G+ N GL
Sbjct: 198 NSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLK 257
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
L K + NV +N++I K L E R + MK + P++ T++ + Y +
Sbjct: 258 NLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQV 317
Query: 475 G---MNDKVY 481
G M KVY
Sbjct: 318 GNSNMAGKVY 327
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 104/265 (39%), Gaps = 22/265 (8%)
Query: 39 FNLIHCSVTSTNKHTSFSSESAVAAKKRLWKEGEYPGVS--ETSIPGYRSK-----RTPI 91
FNL+ ++ + K E AV + + G P V T I G+ +K T +
Sbjct: 202 FNLVLSALCKSGK-----LEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKL 256
Query: 92 KNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLL 151
KNL K + + N++ F + + +A + F +K P TY L+
Sbjct: 257 KNLMGKNGLEPNVVTF-NSLIHGFCK---EGKLHEANRFFSEMKVMNV-TPNTVTYNTLI 311
Query: 152 VLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNC 211
G+ G +A KV+ EM+ G++ Y AL+ C+ +A + ++ N
Sbjct: 312 NGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDK-ENL 370
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
P+ TYS LI + LY+ M PN T ++ + K F+
Sbjct: 371 VPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAFVKNEDFEGAFN 430
Query: 272 VLSGMLESATCKPDVWTMNTILSVF 296
VL M + NT+L ++
Sbjct: 431 VLMDMFARSMASDS----NTLLEIY 451
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L++ L K G+ + A + E+ +E + P Y+AL++ C D AF M
Sbjct: 341 TYNALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSM 400
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG 264
C P+ T+ L A V FE + DM RS+ ++ T + G + G
Sbjct: 401 -VRSGCHPNEQTFKMLTSAFVKNEDFEGAFNVLMDMFARSMASDSNTLLEIYDGLCQCG 458
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 173/373 (46%), Gaps = 12/373 (3%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
LK Q +AL + L Q F Q + +Y L+ + K G A K+ ++ +P
Sbjct: 141 LKGQVKKALHFHDKLLAQGF-QLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNV 199
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLY 238
+Y+ ++ A C+ L+ EA+ ++M T+ DV TYSTLI C++ E I L
Sbjct: 200 VMYSTIIDALCKYQLVSEAYGLFSEM-TVKGISADVVTYSTLIYGFCIEGKLKEAI-GLL 257
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
+M +++ PN T NI++ K G + + VL+ ML+ A KPDV T +T++ +
Sbjct: 258 NEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLK-ACVKPDVITYSTLMDGYFL 316
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
+V + + G+ P+ T+ ILI + K +M D+ ++ + M + T
Sbjct: 317 VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT 376
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
Y+++I+ G ++ ++MH G A+ T+ LI+G G + I+
Sbjct: 377 YSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMK 436
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
I N + ++ K L + + V++ + K + T+++M + + K+G
Sbjct: 437 DQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQG--- 493
Query: 479 KVYALEQEKLQML 491
L +E L ML
Sbjct: 494 ----LLEEALTML 502
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 117/258 (45%), Gaps = 9/258 (3%)
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
+L ++ + + P+ T NI++ + G +L+ +L+ PD T T+++
Sbjct: 947 SLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGY-HPDTITFTTLING 1005
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
KGQV+ +++K G ++ LI G ++ D +++ + +RK+ T
Sbjct: 1006 LCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLIN--GVCKIGDTRAAI-KLLRKIDGRLT 1062
Query: 356 SST---YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVIS 412
YN +I+A F +M+ +G+ AD T+ LI G+ G + I
Sbjct: 1063 KPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIG 1122
Query: 413 SVRLASKLQIAENVSFYNAVISA-CIKADDLM-EMERVYKRMKEKHCRPDSETFSIMTEA 470
+ I NV YN ++ A C + DL+ E + +M++ C+ ++ TF I+ A
Sbjct: 1123 LLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISA 1182
Query: 471 YAKEGMNDKVYALEQEKL 488
++ NDKV L E +
Sbjct: 1183 LFEKDENDKVEKLLHEMI 1200
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 7/189 (3%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F+ + ++ P TY L+ L KSG+ + +EM + G Y++L
Sbjct: 357 EALNLFKEMHQKNMV-PGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSL 415
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+N +D A N+MK +P+ +T++ L+ R + + ++QD+ +
Sbjct: 416 IDGLCKNGHLDRAIALFNKMKD-QGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 474
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF----ANKGQ 301
N T N+++ G+ K G+ ++ +LS M E C PD T I+ N G
Sbjct: 475 YHLNVYTYNVMIDGHCKQGLLEEALTMLSKM-EDNGCIPDAVTFEIIIIALFKKDENGGN 533
Query: 302 VDMMERWYE 310
V ++ +E
Sbjct: 534 VGFDKKVWE 542
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 95/260 (36%), Gaps = 36/260 (13%)
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
TP + N +L + K + LS LE +PD+ T+N +++ F + GQ+
Sbjct: 56 TPPIIQFNKILDSFAKMKHYSTAVS-LSHRLELKGIQPDLITLNILINCFCHMGQITFGF 114
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
K G P+T T N LI K K + + F +Y +I
Sbjct: 115 SVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGV 174
Query: 367 SDMGDAKH-----------------MEYT------------------FEQMHAEGMKADT 391
+GD + + Y+ F +M +G+ AD
Sbjct: 175 CKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADV 234
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
T+ LI G+ G + I + I NV YN ++ A K + E + V
Sbjct: 235 VTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAV 294
Query: 452 MKEKHCRPDSETFSIMTEAY 471
M + +PD T+S + + Y
Sbjct: 295 MLKACVKPDVITYSTLMDGY 314
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 74/192 (38%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P + N IL FA + GI P+ T NILI + SV
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ + K +P + T N +I+ G K + +++ A+G + + ++ LING
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCK 176
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
G I ++ NV Y+ +I A K + E ++ M K D T
Sbjct: 177 IGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236
Query: 464 FSIMTEAYAKEG 475
+S + + EG
Sbjct: 237 YSTLIYGFCIEG 248
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 93/213 (43%), Gaps = 10/213 (4%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y P T+ L+ L GQ A ++++ +G + Y L+ C+ I +
Sbjct: 992 YHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCK---IGDTR 1048
Query: 200 VTLNQMKTLPN--CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVL 257
+ ++ + +PDV Y+T+I A L+ +M+ + ++ + VT N ++
Sbjct: 1049 AAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLI 1108
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMER---WYEKFRN 314
G+ G + +L+ M+ T P+V T N ++ +G+ D+++ K +
Sbjct: 1109 YGFCIVGKLKEAIGLLNKMVLK-TINPNVRTYNILVDALCKEGK-DLLDESLSMLSKMED 1166
Query: 315 FGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
G TF I+I A +K DK+ ++ M
Sbjct: 1167 NGCKANAVTFEIIISALFEKDENDKVEKLLHEM 1199
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 140/320 (43%), Gaps = 2/320 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY LL L ++ + E AR VF M +G P Y+ L+A CR +DEA
Sbjct: 50 PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL 109
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
LN+M + QP+V TY +L+ + + L+ M R P+ V N+++ G+
Sbjct: 110 LNEMIDGGH-QPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFS 168
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G + R+ MLE C P V+T N++LS F+ KG+ ++ ++ G P
Sbjct: 169 KKGDMGEAYRLFEEMLEKG-CIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNI 227
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
TFN L+ + K + + MR L P +YN +I G + +
Sbjct: 228 FTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLRE 287
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G+ D ++ LI+GY+ +G I K + + Y+ +I +A
Sbjct: 288 MIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGK 347
Query: 442 LMEMERVYKRMKEKHCRPDS 461
+ V+K M PD+
Sbjct: 348 VGAAFVVFKDMIANGSAPDA 367
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 150/348 (43%), Gaps = 2/348 (0%)
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
+ F+ Q Y +Y LL +L KSG+ + +N+M+ G P Y LL
Sbjct: 1 MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLR 60
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVT 247
+ C+ +EA M C P+V++YS LI + + L +M +
Sbjct: 61 SLCQAQRFEEARSVFRGMAA-QGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQ 119
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMER 307
PN VT +L G K G + + S M+ C PD N ++ F+ KG + R
Sbjct: 120 PNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRG-CPPDGVVYNVLIDGFSKKGDMGEAYR 178
Query: 308 WYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS 367
+E+ G P T+N L+ + +K + ++ S+ + M + T+NN+++ F
Sbjct: 179 LFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFC 238
Query: 368 DMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVS 427
MGD F +M + G D ++ LI G + G H+ +R + + ++
Sbjct: 239 KMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIV 298
Query: 428 FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
YN +I K+ L +++ + + PD+ ++S + + + G
Sbjct: 299 SYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAG 346
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 142/333 (42%), Gaps = 8/333 (2%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+QP TY LL L K G+ + A +F+ MV G P +Y L+ + + + EA+
Sbjct: 118 HQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAY 177
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+M C P V+TY++L+ F +++L++DM + PN T N +L G
Sbjct: 178 RLFEEMLE-KGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDG 236
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ K G + R+ M S C PDV + NT++ +KG+ +R + G+ P
Sbjct: 237 FCKMGDMVEAHRLFLEM-RSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGP 295
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ ++NILI Y K D + + K + +Y+ +I+ G F
Sbjct: 296 DIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVF 355
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
+ M A G D L+ G + + K + + YN ++ KA
Sbjct: 356 KDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKA 415
Query: 440 ---DDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
DD+ E ++ + E+ PD E ++ E
Sbjct: 416 KRSDDVCE---IFHELTERGFSPDVEISKVILE 445
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 138/308 (44%), Gaps = 8/308 (2%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y LL ++ D + T N M C P+ YTY L+++ A RFE ++++ M
Sbjct: 20 YNYLLEVLAKSGRCDHVYGTYNDMLA-AGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ +PN + +I++ G + D+ +L+ M++ +P+V T ++LS G+
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGH-QPNVVTYGSLLSGLCKMGK 137
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ + + G P+ +N+LI + KK + + E M + T TYN+
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF---HKVISSVRLAS 418
++ FS G+ ++ F+ M +G + TF L++G+ G H++ +R
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMR--- 254
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
L +V YN +I E +R+ + M PD +++I+ + Y+K G D
Sbjct: 255 SLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALD 314
Query: 479 KVYALEQE 486
L E
Sbjct: 315 HAIKLFYE 322
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 188/445 (42%), Gaps = 13/445 (2%)
Query: 32 HRAQVPNFNLIHCSVTSTNKHTSFSSESAVAAKKRLWKEGEYPGVS--ETSIPGYRSKRT 89
++ +P+ +I C+ S ++ A + L G P V I GY K
Sbjct: 134 YQGDIPD--VIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGY-CKSG 190
Query: 90 PIKNLKKKLERKAKAKAWV--NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTY 147
I + LER + A V NT+ + D + +A++V + ++ Y P TY
Sbjct: 191 EIDKALEVLERMSVAPDVVTYNTILRSLCD---SGKLKEAMEVLDRQLQRECY-PDVITY 246
Query: 148 MKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKT 207
L+ A K+ +EM ++G +P Y L+ C+ +DEA LN M +
Sbjct: 247 TILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPS 306
Query: 208 LPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFD 267
C+P+V T++ ++++ R+ E L DM + +P+ VT NI++ + +
Sbjct: 307 Y-GCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLG 365
Query: 268 QMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
+ VL M + C P+ + N +L F + ++D + E + G P+ T+N L
Sbjct: 366 RAIDVLEKMPKHG-CVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTL 424
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
+ A K D ++ + TYN VI+ + +G ++ E+M +G+
Sbjct: 425 LTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGL 484
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
K D T+ L+ G G + I L I + YNA++ KA
Sbjct: 485 KPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAID 544
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYA 472
M EK C+P T++I+ E A
Sbjct: 545 FLAYMVEKGCKPTEATYTILIEGIA 569
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 108/248 (43%), Gaps = 7/248 (2%)
Query: 123 QWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
+W A ++ +ML++ P T+ L+ L + A V +M + G P
Sbjct: 328 RWMDAERLLSDMLRKG--CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLS 385
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQD 240
Y LL +C+ +D A L M + C PD+ TY+TL+ A C D +E L Q
Sbjct: 386 YNPLLHGFCQEKKMDRAIEYLEIMVS-RGCYPDIVTYNTLLTALCKDGKVDAAVEILNQ- 443
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
+ + +P +T N V+ G K G + +L M KPD+ T +T+L +G
Sbjct: 444 LSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGL-KPDIITYSTLLRGLGREG 502
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+VD + + I P T+N ++ K + + + YM + T +TY
Sbjct: 503 KVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYT 562
Query: 361 NVIEAFSD 368
+IE +D
Sbjct: 563 ILIEGIAD 570
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 118/319 (36%), Gaps = 32/319 (10%)
Query: 191 RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT 250
RN ++E L +M + PDV ++LI+ + + + + + ++ P+
Sbjct: 118 RNGELEEGLKFLERMIYQGDI-PDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDV 176
Query: 251 VTQNIVLGGYGKAGMFDQMERVL---------------------SGMLESAT-------- 281
+T N+++GGY K+G D+ VL SG L+ A
Sbjct: 177 ITYNVLIGGYCKSGEIDKALEVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQ 236
Query: 282 --CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
C PDV T ++ N V + ++ R G P+ T+N+LI K+ D+
Sbjct: 237 RECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDE 296
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+ M T+N ++ + G E M +G TF LIN
Sbjct: 297 AIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILIN 356
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
L + I + K N YN ++ + + + M + C P
Sbjct: 357 FLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYP 416
Query: 460 DSETFSIMTEAYAKEGMND 478
D T++ + A K+G D
Sbjct: 417 DIVTYNTLLTALCKDGKVD 435
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 5/119 (4%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
NTV + + V K ++ A+++ E ++ + +P TY LL LG+ G+ + A K+F+
Sbjct: 457 NTVIDGLT-KVGKTEY--AVELLEEMRRKGL-KPDIITYSTLLRGLGREGKVDEAIKIFH 512
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
+M I+P+ Y A++ C+ A L M C+P TY+ LI+ D
Sbjct: 513 DMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYM-VEKGCKPTEATYTILIEGIAD 570
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 156/336 (46%), Gaps = 8/336 (2%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY ++ L K G+ + A F+EM +GI+ Y +L+ ++C D+
Sbjct: 262 KPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQ 321
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L M T P+V T+S LI + V + + LY +M R + PNT+T N ++ G
Sbjct: 322 LLRDMIT-RKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGL 380
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
D+ +++ M+ S C PD+WT N +++ F QVD R + K G+ +
Sbjct: 381 CNDKRLDEANQMMDLMV-SKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIAD 439
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T T++ LI + + R V + M TY +++ D G+ + +
Sbjct: 440 TVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILD 499
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL---QIAENVSFYNAVISACI 437
QMH M+ D + +I+G NA +KV + L L + ++ YN ++S
Sbjct: 500 QMHKCKMELDIGIYNIIIHGMCNA---NKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLC 556
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
K L E + ++++MKE PD T++ + A+ +
Sbjct: 557 KRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLR 592
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 120/292 (41%), Gaps = 47/292 (16%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ L K G+ A+ ++NEM+ GIEP Y +L+ C + +DEA
Sbjct: 333 PNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEA--- 389
Query: 202 LNQMKTL---PNCQPDVYTYSTLI------KACVDAMRF--------------------- 231
NQM L C PD++TY+ LI K D MR
Sbjct: 390 -NQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQ 448
Query: 232 ------ELI--ETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK 283
+LI + ++Q+M + V P +T I+L G G ++E L + + CK
Sbjct: 449 GFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNG---ELEEALGILDQMHKCK 505
Query: 284 --PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
D+ N I+ N +VD + + G+ + +++NI++ K+ +
Sbjct: 506 MELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEAD 565
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
++ M++ + TYN +I A D E+M G +D T
Sbjct: 566 ALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDAST 617
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 147/359 (40%), Gaps = 25/359 (6%)
Query: 126 QALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT- 183
A+ +F+ ML+ +P P + +L LL ++ Q +L + +M +GI +LYT
Sbjct: 73 DAVALFQSMLRSRPL--PTVIDFNRLFGLLARTKQYDLVLALCKQMELKGI--AYDLYTL 128
Query: 184 -ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDM 241
++ +CR + AF + ++ L +P+ T++TL+ C++ FE +E L M
Sbjct: 129 NIMINCFCRRRKLGFAFSAMGKIFKLGY-EPNTVTFNTLLNGLCLEGRVFEAVE-LVDCM 186
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
P+ +T N ++ G + +++ M+ + C+P+ +T IL+ G
Sbjct: 187 VLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANG-CQPNQFTYGPILNRMCKSGN 245
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
K + I P T+ I+I K D S M TYN+
Sbjct: 246 TASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNS 305
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISSV 414
+I +F G M + + TF LI+ G L++++I+
Sbjct: 306 LIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITR- 364
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
I N YN++I L E ++ M K C PD T++I+ + K
Sbjct: 365 ------GIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCK 417
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 82/183 (44%), Gaps = 2/183 (1%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ +S + +A+KVF EMV +G+ P Y LL C N ++EA L+QM
Sbjct: 442 TYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQM 501
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ D+ Y+ +I +A + + +L+ + + V + + NI+L G K
Sbjct: 502 HKCKM-ELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSS 560
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+ + + M E +PD T NT++ + + E+ + G + T
Sbjct: 561 LSEADALFRKMKEDGY-EPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVK 619
Query: 326 ILI 328
I++
Sbjct: 620 IVM 622
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 113/317 (35%), Gaps = 45/317 (14%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A +F M+ PT + L R D QM+ L D+YT + +I
Sbjct: 74 AVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQME-LKGIAYDLYTLNIMI 132
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-MFDQMERVLSGMLESAT 281
+ + + + PNTVT N +L G G +F+ +E V +L
Sbjct: 133 NCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHV 192
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
PD+ T+NTI++ K +V + G P T+ ++ K +
Sbjct: 193 --PDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKS---GNTA 247
Query: 342 SVMEYMRKLQFPWTSS---TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
S ++ +RK++ TY +I+ G F +M +G+KA
Sbjct: 248 SALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKA--------- 298
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
NV YN++I + + ++ + M +
Sbjct: 299 --------------------------NVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKIT 332
Query: 459 PDSETFSIMTEAYAKEG 475
P+ TFS + ++ KEG
Sbjct: 333 PNVVTFSALIDSLVKEG 349
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 151/346 (43%), Gaps = 5/346 (1%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL+VF +QP + P Y ++L LGK+G E R+V EM G E ++ +
Sbjct: 80 ALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFV 139
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+Y + L DE + M+ +PD Y+ L+ VDA + +L+E+ + M R +
Sbjct: 140 ESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRI 199
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE--SATCKPDVWTMNTILSVFANKGQVDM 304
+ T NI++ KA Q+ + M E S PD T TI+ + G +D
Sbjct: 200 RHDVSTFNILIKALCKA---HQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDG 256
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
R E+ +G T N+LI + K+ D+ S ++ F TYN ++
Sbjct: 257 ALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVN 316
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
+G AKH + M G+ D T+ LI+G G + + + +
Sbjct: 317 GLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSP 376
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
N YNA+IS+ K + + E + + + K PD TF+ + +
Sbjct: 377 NAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQG 422
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 155/378 (41%), Gaps = 51/378 (13%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
++P + TY L+ L K G + A +V + M+ G++P Y +L++ C+ I+EA
Sbjct: 304 FRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAV 363
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP-----NTVTQN 254
L+QM + +C P+ TY+ +I + R + + + + + + P N++ Q
Sbjct: 364 KILDQMVS-RDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQG 422
Query: 255 IVLGGYGKAGM--FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF 312
+ L K+ M F++M+ C+PD +T N ++ + +++ ++
Sbjct: 423 LCLSSNHKSAMDLFEEMK--------GKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEM 474
Query: 313 RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
G +N LI + K + ++ + + M S TYN +I+
Sbjct: 475 ELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRV 534
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK----------------------V 410
+ +QM EG++ D T+ L+ + G K +
Sbjct: 535 EDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATL 594
Query: 411 ISSVRLASKLQIAENV-------------SFYNAVISACIKADDLMEMERVYKRMKEKHC 457
IS + A ++Q+A + YN VI A K + E R+++ M +K
Sbjct: 595 ISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSE 654
Query: 458 RPDSETFSIMTEAYAKEG 475
PD+ T+ I+ G
Sbjct: 655 PPDAITYKIVYRGLCNGG 672
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 157/382 (41%), Gaps = 45/382 (11%)
Query: 118 HVLKKQWFQALQV---FEMLKEQPFY--QPKEGTYMKLLVLLGKSGQPELARKVFNEMVE 172
++L K +A QV M++E P Y P E T+ ++ + G + A ++ +MVE
Sbjct: 207 NILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVE 266
Query: 173 EGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE 232
G T L+ +C+ ID+A ++ Q +PD +TY+TL+ +
Sbjct: 267 YGCPCTDVTVNVLINGFCKQGRIDQA-LSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAK 325
Query: 233 LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTI 292
+ M + P+ T N ++ G K G ++ ++L M+ S C P+ T N I
Sbjct: 326 HAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMV-SRDCSPNAVTYNAI 384
Query: 293 LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF 352
+S + +VD + GI P+ TFN LI Q
Sbjct: 385 ISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLI----------------------QG 422
Query: 353 PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVIS 412
SS + + ++ FE+M +G + D T+ LI+ ++ + ++
Sbjct: 423 LCLSSNHKSAMD-------------LFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALN 469
Query: 413 SVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
++ A NV YN +I K + E E ++ M+ + DS T++ + +
Sbjct: 470 LLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLC 529
Query: 473 KEGMNDKVYALEQEKLQMLLEA 494
K + +V Q QM++E
Sbjct: 530 K---SKRVEDAAQLMDQMIMEG 548
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 125/323 (38%), Gaps = 40/323 (12%)
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
PN P Y +++ A FE + + ++M + I + YGK ++D+
Sbjct: 91 PNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDE 150
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
+ ++ M + KPD N +L+V + ++ ++E + I + TFNILI
Sbjct: 151 VVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILI 210
Query: 329 GAYGKKR-------MYDKMSS----------------------------VMEYMRKLQFP 353
A K M ++M S + E M + P
Sbjct: 211 KALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCP 270
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
T T N +I F G ++ +EG + D T+ L+NG G +
Sbjct: 271 CTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEV 330
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
V + ++ YN++IS K ++ E ++ +M + C P++ T++ + + K
Sbjct: 331 VDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCK 390
Query: 474 EGMNDKVYALEQEKLQMLLEASG 496
E D E ++ LL + G
Sbjct: 391 ENRVD-----EATEIARLLTSKG 408
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 174/402 (43%), Gaps = 16/402 (3%)
Query: 76 VSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDH--VLKKQWFQALQVFEM 133
V + SIP + P+ NLK + E K+ + + +H L ++F+++ +
Sbjct: 13 VRKPSIP-FVLSTNPVPNLKAENEEKSSVLKEADVLKRLKHEHDITLALEYFKSIANSKS 71
Query: 134 LKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNS 193
K P TY ++ L + + + + +M EGI + +L+ +++ +Y R
Sbjct: 72 FKHTPL------TYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAG 125
Query: 194 LIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQ 253
++A T +M+ +P V Y+ ++ A +D RF++I +Y +M + + PN T
Sbjct: 126 SSEQALKTFYRMQDF-RVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTY 184
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
NI+L K D ++L M S C PD + T++S G+V F
Sbjct: 185 NILLKALCKNNRVDGAHKLLVEM-SSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFT 243
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
P +N LI K+ +++ +++ M +Y +I A SD G+ +
Sbjct: 244 -----PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVE 298
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
+M A G + TF LI G+ G H+ + + + NV YNA++
Sbjct: 299 LSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALM 358
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
L + V+ +M+ C P+ T+S + + YAK G
Sbjct: 359 HGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAG 400
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 136/330 (41%), Gaps = 8/330 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ G A ++ M+ EG+ P Y AL+ C + +A
Sbjct: 314 PNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSV 373
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
NQM+ + C P+V TYS LI A + ++ M PN V ++
Sbjct: 374 FNQME-INGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLC 432
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ MF+Q ++ M + C P+ T NT + G+VD + +++ N G P T
Sbjct: 433 RNSMFNQAYCLIENM-QVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNT 491
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+N L+ + K R + + +++ M TYN +I + G +
Sbjct: 492 TTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGK 551
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE---NVSFYNAVISACIK 438
M G K D T +I+ Y G KV +++L +L + ++ Y ++IS
Sbjct: 552 MVVRGTKPDAITVNIVIDAYCKQG---KVNIAIQLMDRLSAGKWHPDIIAYTSLISGICT 608
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ E +RM + P+ T++++
Sbjct: 609 HIGVEEAIVYLRRMLSEGISPNVATWNVLV 638
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 152/369 (41%), Gaps = 40/369 (10%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
P E +Y L+ L K G+ + AR++ P+ +Y AL+ C+ +EAF
Sbjct: 213 DPDEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQ 267
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVT-QNIVLGG 259
L++M P+V +Y+T+I A DA EL + M R +PN T +++ G
Sbjct: 268 LLDEMMN-KGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGF 326
Query: 260 YGKAG------MFDQMER------------VLSGM---------------LESATCKPDV 286
+ K G +D+M R ++ G+ +E C P+V
Sbjct: 327 FLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNV 386
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
T + ++ +A G +D + G P + ++ + M+++ ++E
Sbjct: 387 RTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIEN 446
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M+ P + T+N I+ G F+QM G +T T+ L++
Sbjct: 447 MQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRR 506
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
F + V+ I N+ YN +I A L E + +M + +PD+ T +I
Sbjct: 507 FGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNI 566
Query: 467 MTEAYAKEG 475
+ +AY K+G
Sbjct: 567 VIDAYCKQG 575
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/371 (19%), Positives = 150/371 (40%), Gaps = 9/371 (2%)
Query: 117 DHVLKKQWFQALQ-VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
D +L + FQ + ++ +K+ +P TY LL L K+ + + A K+ EM +G
Sbjct: 154 DALLDENRFQMINPIYSNMKKDGM-EPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGC 212
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
+P YT L+++ C+ + EA + + P V Y+ LI FE
Sbjct: 213 DPDEVSYTTLISSLCKLGKVKEA------RELAMSFTPSVPVYNALINGVCKEYTFEEAF 266
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
L +M + + PN ++ ++ AG + VL+ M C P++ T +++
Sbjct: 267 QLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARG-CSPNLHTFTSLIKG 325
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
F KG ++++ G+ P +N L+ KR SV M
Sbjct: 326 FFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPN 385
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
TY+ +I+ ++ GD + M G + + C+++ +F++ +
Sbjct: 386 VRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIE 445
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
N +N I + + +V+ +M C P++ T++ + ++ K+
Sbjct: 446 NMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDR 505
Query: 476 MNDKVYALEQE 486
+ + L ++
Sbjct: 506 RFGEAFGLVKD 516
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 4/147 (2%)
Query: 344 MEYMRKL----QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+EY + + F T TY +IE + + ++Y +QM EG+ F +I
Sbjct: 60 LEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIG 119
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
Y AG + + + ++ V YN ++ A + + + +Y MK+ P
Sbjct: 120 SYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEP 179
Query: 460 DSETFSIMTEAYAKEGMNDKVYALEQE 486
+ T++I+ +A K D + L E
Sbjct: 180 NVFTYNILLKALCKNNRVDGAHKLLVE 206
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 171/372 (45%), Gaps = 10/372 (2%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
LK Q +AL + L Q F Q + +Y L+ + K G A K+ ++ +P
Sbjct: 389 LKGQVKKALHFHDKLLAQGF-QLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNV 447
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
E+Y+ ++ A C+ L+ EA+ ++M T+ DV TYSTLI + + L
Sbjct: 448 EMYSTIIDALCKYQLVSEAYGLFSEM-TVKGISADVVTYSTLIYGFCIVGKLKEAIGLLN 506
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
+M +++ P+ T I++ GK G + + VL+ ML+ A KPDV+T NT+++ +
Sbjct: 507 EMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLK-ACVKPDVFTYNTLMNGYLLV 565
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
+V + + G+ P+ T+ ILI + K +M D+ ++ + M + + TY
Sbjct: 566 YEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTY 625
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+++++ G ++ ++M G AD T+ LI+G G K I+
Sbjct: 626 SSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKD 685
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
I N + ++ K L + + V++ + K D +++M + K+G
Sbjct: 686 QGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQG---- 741
Query: 480 VYALEQEKLQML 491
L +E L ML
Sbjct: 742 ---LLEEALTML 750
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 176/402 (43%), Gaps = 39/402 (9%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
LK Q +AL + L Q F Q + +Y L+ + + G A K ++ +P
Sbjct: 75 LKGQVKEALHFHDKLLAQGF-QLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNV 133
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
E+Y ++ A C+ L+ EA+ ++M T+ +V TYSTLI + + L
Sbjct: 134 EMYNTIIDALCKYQLVSEAYGLFSEM-TVKGISANVVTYSTLIYGFCIVGKLKEALGLLN 192
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
M +++ PN T NI++ K G + + VL+ ML+ A K +V T +T++ +
Sbjct: 193 VMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLK-ACVKSNVITYSTLMDGYFLV 251
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
+V + + G+ P+ ++NI+I + K + DK ++ + M +FP +
Sbjct: 252 YEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQ-F 310
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVI- 411
N ++++F+ M ++ +G++ D T LIN + + G + K++
Sbjct: 311 NKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILK 370
Query: 412 -----SSVRLAS-------KLQIAENVSF---------------YNAVISACIKADDLME 444
S+V L + K Q+ + + F Y +I+ K D
Sbjct: 371 RGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRG 430
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
++ +++ + +P+ E +S + +A K + + Y L E
Sbjct: 431 AIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSE 472
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 145/365 (39%), Gaps = 44/365 (12%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A+ VFN M G+ P Y ++ +C+ +D+A +M + + P + ++ ++
Sbjct: 257 AQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEM--ILSRFPPIIQFNKIL 314
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
+ + +L ++ + + P+ T NI++ + G VL+ +L+
Sbjct: 315 DSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGY- 373
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
P T+NT++ KGQV +++K G ++ LI G ++ D +
Sbjct: 374 PPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLIN--GVCKIGDTRGA 431
Query: 343 VMEYMRKLQFPWTSST---YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+ + +RK+ T Y+ +I+A F +M +G+ AD T+ LI
Sbjct: 432 I-KLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIY 490
Query: 400 GYANAGLFHKVIS------------SVR--------LASKLQIAENVSFYNAVISACIKA 439
G+ G + I VR L + ++ E S ++ AC+K
Sbjct: 491 GFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKP 550
Query: 440 D---------------DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
D ++ + + V+ M PD T++I+ + K M D+ L
Sbjct: 551 DVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLF 610
Query: 485 QEKLQ 489
+E Q
Sbjct: 611 KEMHQ 615
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/348 (19%), Positives = 138/348 (39%), Gaps = 62/348 (17%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y P T L+ L GQ + A ++++ +G + Y L+ CR I +
Sbjct: 59 YPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCR---IGDTR 115
Query: 200 VTLNQMKTLPN--CQPDVYTYSTLIKACVDAMRFELIE---TLYQDMDERSVTPNTVTQN 254
+ ++ + +P+V Y+T+I A +++L+ L+ +M + ++ N VT +
Sbjct: 116 AAIKFLRKIDGRLAKPNVEMYNTIIDALC---KYQLVSEAYGLFSEMTVKGISANVVTYS 172
Query: 255 IVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRN 314
++ G+ + G L+ A +V + TI
Sbjct: 173 TLIYGF-----------CIVGKLKEALGLLNVMVLKTI---------------------- 199
Query: 315 FGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKH 374
+P T+NIL+ A K+ + SV+ M K TY+ +++ + + + K
Sbjct: 200 ---NPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKK 256
Query: 375 MEYTFEQMHAEGMKADTKTFCCLINGYANA-------GLFHKVISSVRLASKLQIAENVS 427
++ F M G+ D ++ +ING+ LF ++I S R +Q
Sbjct: 257 AQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILS-RFPPIIQ------ 309
Query: 428 FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+N ++ + K + R++ K +PD T +I+ + G
Sbjct: 310 -FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMG 356
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 93/241 (38%), Gaps = 41/241 (17%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
PD T+NT++ KGQV +++K G ++ LI G R+ D +++
Sbjct: 61 PDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN--GVCRIGDTRAAI 118
Query: 344 MEYMRKLQFPWTSST---YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+++RK+ YN +I+A F +M +G+ A+ T+ LI G
Sbjct: 119 -KFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYG 177
Query: 401 YANAGLFHKVISSVRLASKLQIAENVSFYNAVISA--------------------CIKAD 440
+ G + + + + I NV YN ++ A C+K++
Sbjct: 178 FCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSN 237
Query: 441 ---------------DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
++ + + V+ M PD +++IM + K DK L +
Sbjct: 238 VITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFK 297
Query: 486 E 486
E
Sbjct: 298 E 298
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ +F +K+Q +P T+ LL L K G+ + A++VF +++ +G +Y +
Sbjct: 675 KAIALFNKMKDQGI-RPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVM 733
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +C+ L++EA L++M+ C P+ T+ +I A + E L + M R
Sbjct: 734 IYGHCKQGLLEEALTMLSKMEE-NGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARG 792
Query: 246 V 246
+
Sbjct: 793 L 793
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 55/134 (41%)
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
SV+ + K +P + T N +I+ G K + +++ A+G + + ++ LING
Sbjct: 49 SVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGV 108
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
G I +R NV YN +I A K + E ++ M K +
Sbjct: 109 CRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANV 168
Query: 462 ETFSIMTEAYAKEG 475
T+S + + G
Sbjct: 169 VTYSTLIYGFCIVG 182
>gi|302823876|ref|XP_002993586.1| hypothetical protein SELMODRAFT_137265 [Selaginella moellendorffii]
gi|300138598|gb|EFJ05361.1| hypothetical protein SELMODRAFT_137265 [Selaginella moellendorffii]
Length = 451
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 161/357 (45%), Gaps = 10/357 (2%)
Query: 124 WFQALQVFEMLKEQPFY---QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
W AL +F+ L++ + E + K++ +GK GQ LA +F+++ + TP
Sbjct: 75 WALALALFKWLQKNEARLSNRDLEVAHAKIIDTMGKQGQLRLASWIFSQL-QLSSRTTPV 133
Query: 181 LYTALLAAY-CRN--SLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
L ++A C+N +D A MKT + P + TY+ L +AC A + E L
Sbjct: 134 LNAIIMAHLRCKNVARALDSALDHFGHMKTSVHSCPSLATYNMLTRACAQAGLTDKAEAL 193
Query: 238 YQDMDER-SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
+ ++ R + P+ T N ++ Y K G++ ME L M E +PD+ T N ++ +
Sbjct: 194 FLELLRREDLKPDAYTFNGIMDAYAKKGLYRDMEYKLKEMSEHGV-RPDLVTFNVLIDAY 252
Query: 297 ANKGQVDMMERWYEKFRNF-GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
G MER Y+ N G P TFN ++ +YG+ R KM V+ M
Sbjct: 253 GRAGDFVKMERTYKSLVNLSGCKPSATTFNSMLASYGQSRELGKMEQVLVRMDMAGLGPD 312
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
+T+N ++ ++ G+ M F++M +K T L+ YA GL + +
Sbjct: 313 LTTFNTLMSSYGRAGELDTMRKCFDKMVRSPVKPQVSTLDVLLRAYAEHGLVDEAEALFI 372
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
ASKL I VS Y + A + L +M + +M++ E E+YA
Sbjct: 373 NASKLDIKPAVSSYLILFKAYGEERQLDKMTVLMSKMEQSGVESGQEFLLQALESYA 429
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 319 PETRTFNILIGAYGKKRMYDKMSSV-MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P T+N+L A + + DK ++ +E +R+ + T+N +++A++ G + MEY
Sbjct: 169 PSLATYNMLTRACAQAGLTDKAEALFLELLRREDLKPDAYTFNGIMDAYAKKGLYRDMEY 228
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE-NVSFYNAVISAC 436
++M G++ D TF LI+ Y AG F K+ + + L + + + +N+++++
Sbjct: 229 KLKEMSEHGVRPDLVTFNVLIDAYGRAGDFVKMERTYKSLVNLSGCKPSATTFNSMLASY 288
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
++ +L +ME+V RM PD TF+ + +Y + G D
Sbjct: 289 GQSRELGKMEQVLVRMDMAGLGPDLTTFNTLMSSYGRAGELD 330
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 170/385 (44%), Gaps = 38/385 (9%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A ++ ++KE+ P + TY + L KS + E AR++F+ + EEG+ +Y+ L+
Sbjct: 346 AYRLLSLMKERGLV-PDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLI 404
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
YC+ +DEA +M + NC P+ YT++ LI A + +L+ M + +
Sbjct: 405 DGYCKVGKVDEAGCLFEKMLS-KNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGL 463
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P T NI++G K G FD + L M+ S KP T N + V+ + G+V E
Sbjct: 464 KPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGE-KPVARTYNAFIEVYCSAGKVQEAE 522
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI--- 363
+ + G+ P+ T+ LI AYGK + V++ M + T+ ++I
Sbjct: 523 DMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQL 582
Query: 364 ---------------EAFSDMGDA------KHMEYT-----FEQMHAEGMKADTKTFCCL 397
E+ S+ GD K ME+ FE+M G D+K + L
Sbjct: 583 FDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKL 642
Query: 398 INGYA---NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
I+G N G+ K++ ++ K I+ + +NAVIS C K E + + M
Sbjct: 643 ISGICKVENLGIALKLLDQMQ---KEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMIC 699
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDK 479
P E + +EG ++
Sbjct: 700 SGHSPQLEHCKTLICGLYEEGETER 724
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 125/281 (44%), Gaps = 4/281 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ +F +K+ Y P TY L+ L + + A + +EM+E + P Y +L
Sbjct: 276 EAVSLFVRMKDDCCY-PNVYTYTALIKGLCRKNVHK-AMGLLDEMLERNLVPDLITYNSL 333
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+A CR +D A+ L+ MK PD TY I + R E L+ + E
Sbjct: 334 IAGQCRAGHLDSAYRLLSLMKE-RGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEG 392
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
V+ N + ++++ GY K G D+ + ML S C P+ +T N ++ + G +
Sbjct: 393 VSANVIMYSVLIDGYCKVGKVDEAGCLFEKML-SKNCSPNAYTFNALIHGLCSAGNLKEA 451
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+++ G+ P TFNILIG K+ +D ++ M + TYN IE
Sbjct: 452 LSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEV 511
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
+ G + E QM EG+ D T+ LI Y GL
Sbjct: 512 YCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGL 552
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 163/402 (40%), Gaps = 46/402 (11%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
EML+E F T+ ++ + K G + A++ +M++ G+ P T+ + YCR
Sbjct: 182 EMLEE--FVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCR 239
Query: 192 NSLIDEAFVTLNQMKTLPN---------------------------------CQPDVYTY 218
+ +D AF +M PN C P+VYTY
Sbjct: 240 SKDVDSAFRVFEEM---PNRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTY 296
Query: 219 STLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
+ LIK + + L +M ER++ P+ +T N ++ G +AG D R+LS M E
Sbjct: 297 TALIKGLCRKNVHKAM-GLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKE 355
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
PD T + +V+ R ++ G+ +++LI Y K D
Sbjct: 356 RGLV-PDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVD 414
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+ + E M + T+N +I G+ K F+QM G+K TF LI
Sbjct: 415 EAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILI 474
Query: 399 NGYANAGLF---HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
G F HK + + + + +A YNA I A + E E + +MKE+
Sbjct: 475 GRMLKQGDFDDAHKCLQKMMSSGEKPVART---YNAFIEVYCSAGKVQEAEDMMVQMKEE 531
Query: 456 HCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
PD T++ + +AY K G+ + + + E S H
Sbjct: 532 GVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHH 573
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/357 (20%), Positives = 138/357 (38%), Gaps = 31/357 (8%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ L +G + A +F++MV+ G++PT + L+ + D+A
Sbjct: 430 PNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKC 489
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L +M + +P TY+ I+ A + + E + M E V P+ T ++ YG
Sbjct: 490 LQKMMSSGE-KPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYG 548
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWT-MNTILSVF-----------------ANKGQV- 302
K G+ VL M + A C+P T ++ I +F +N G V
Sbjct: 549 KLGLTYSAFDVLKSMFD-ADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVP 607
Query: 303 ----------DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF 352
D++ +E+ G P+++ + LI K +++ M+K
Sbjct: 608 GSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGI 667
Query: 353 PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVIS 412
+ +N VI + E M G + LI G G + S
Sbjct: 668 SPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNS 727
Query: 413 SVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+ ++ + +I +K + E ++++ M++ C T+SI+T+
Sbjct: 728 VFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQ 784
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 74/168 (44%), Gaps = 5/168 (2%)
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+ +N L+ + + D+M+ + M + T+N +I + MG K + +
Sbjct: 158 KCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCK 217
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G+ D T I GY + V S+ R+ ++ VS YN +I +A
Sbjct: 218 MIQAGLSPDYFTSTSFILGYCRS---KDVDSAFRVFEEMPNRNEVS-YNQLIHGLCEAGR 273
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ E ++ RMK+ C P+ T++ + + ++ ++ K L E L+
Sbjct: 274 IDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNVH-KAMGLLDEMLE 320
>gi|302822123|ref|XP_002992721.1| hypothetical protein SELMODRAFT_135826 [Selaginella moellendorffii]
gi|300139462|gb|EFJ06202.1| hypothetical protein SELMODRAFT_135826 [Selaginella moellendorffii]
Length = 449
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 164/358 (45%), Gaps = 12/358 (3%)
Query: 124 WFQALQVFEMLKEQPFY---QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
W AL +F+ L++ + E + K++ +GK GQ LA +F+++ + TP
Sbjct: 73 WALALALFKWLQKNEARLSNRDLEVAHAKIIDTMGKQGQLRLASWIFSQL-QLSSRTTP- 130
Query: 181 LYTALLAAY--CRN--SLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
++ A++ A+ C+N +D A MKT + P + TY+ L +AC A + E
Sbjct: 131 VFNAIIMAHLRCKNVARALDSALDHFGHMKTSVHSCPSLATYNMLTRACAQAGLTDKAEA 190
Query: 237 LYQDMDERS-VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
L+ ++ R + P+ T N ++ Y K G++ ME L M E +PD+ T N ++
Sbjct: 191 LFLELLRRDDLKPDAYTFNGIMDAYAKKGLYRDMEYKLKEMSEHGV-RPDLVTFNVLIDA 249
Query: 296 FANKGQVDMMERWYEKFRNF-GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 354
+ G MER Y+ N G P TFN ++ +YG+ R KM V+ M
Sbjct: 250 YGRAGDFVKMERTYKSLVNLSGCKPSATTFNSMLASYGQSRELGKMEQVLVRMDMAGLGP 309
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
+T+N ++ ++ G+ M F++M +K T L+ YA GL + +
Sbjct: 310 DLTTFNTLMSSYGRAGELDTMRKCFDKMVRSPVKPQVSTLDVLLRAYAEHGLVDEAEALF 369
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
ASKL I VS Y + A + L +M + +M++ E E+YA
Sbjct: 370 INASKLDIKPAVSSYLILFKAYGEERQLDKMTVLMSKMEQSGVESGQEFLLQALESYA 427
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 319 PETRTFNILIGAYGKKRMYDKMSSV-MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P T+N+L A + + DK ++ +E +R+ + T+N +++A++ G + MEY
Sbjct: 167 PSLATYNMLTRACAQAGLTDKAEALFLELLRRDDLKPDAYTFNGIMDAYAKKGLYRDMEY 226
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE-NVSFYNAVISAC 436
++M G++ D TF LI+ Y AG F K+ + + L + + + +N+++++
Sbjct: 227 KLKEMSEHGVRPDLVTFNVLIDAYGRAGDFVKMERTYKSLVNLSGCKPSATTFNSMLASY 286
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
++ +L +ME+V RM PD TF+ + +Y + G D
Sbjct: 287 GQSRELGKMEQVLVRMDMAGLGPDLTTFNTLMSSYGRAGELD 328
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 167/362 (46%), Gaps = 3/362 (0%)
Query: 133 MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRN 192
M+K+ P +Y ++ + G+ A +F+EM+++G+ P Y++ + A C+
Sbjct: 216 MVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKA 275
Query: 193 SLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVT 252
+D+A + L QM + +PD TY+ +I +++ ++++M R + P+ T
Sbjct: 276 RAMDKAELVLRQMIS-NGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFT 334
Query: 253 QNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF 312
N + K G + M KPD+ T + +L +A +G V M +
Sbjct: 335 CNSYMSSLCKHGKSKEAAEFFDSMAAKGH-KPDLVTYSVLLHGYAAEGYVVDMLNLFNSM 393
Query: 313 RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
GI + +NILI AYGK+ M D+ + M++ + TY VI AFS MG
Sbjct: 394 EGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRL 453
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV-RLASKLQIAENVSFYNA 431
F QM A G+K DT + LI G+ G K + + S+ N F+N+
Sbjct: 454 ADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNS 513
Query: 432 VISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQML 491
+I++ K ++E + ++ + RPD TF+ + + Y G +K + + + +
Sbjct: 514 IINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVG 573
Query: 492 LE 493
+E
Sbjct: 574 IE 575
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 160/392 (40%), Gaps = 41/392 (10%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
++P TY LL G +FN M GI +Y L+ AY + ++DEA
Sbjct: 363 HKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAM 422
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+ QM+ PD +TY T+I A R + M + P+T+ N ++ G
Sbjct: 423 LIFTQMQE-RGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQG 481
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ G + + ++S M+ +P+ N+I++ +G+V + ++ + G P
Sbjct: 482 FCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERP 541
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ TFN LI YG +K V++ M + TY+ +++ + G F
Sbjct: 542 DVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILF 601
Query: 380 EQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISS------------------- 413
+M ++G+K T T+ +++G N G + H++I S
Sbjct: 602 REMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRN 661
Query: 414 ------VRLASKL---QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
+ L KL + N++ N +I A K E ++ + P++ T+
Sbjct: 662 NCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTY 721
Query: 465 SIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
+M KEG + E + + L+E SG
Sbjct: 722 GVMITNLLKEGSVE-----EADNMFSLMEKSG 748
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 151/337 (44%), Gaps = 5/337 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF-V 200
P TY L+ ++ +P + +F ++ G++ + LL C D+A V
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS--VTPNTVTQNIVLG 258
L++M L +PD +YST++K+ + R + L M ++S +PN V+ N V+
Sbjct: 177 LLHRMPEL-GVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIH 235
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
G+ + G + + M++ PDV T ++ + +D E + + G +
Sbjct: 236 GFFREGEVSKACNLFHEMMQQGVV-PDVVTYSSYIDALCKARAMDKAELVLRQMISNGFE 294
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P+ T+N +I Y + + + + M + T N+ + + G +K
Sbjct: 295 PDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEF 354
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
F+ M A+G K D T+ L++GYA G +++ I + S YN +I A K
Sbjct: 355 FDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGK 414
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ E ++ +M+E+ PD+ T+ + A+++ G
Sbjct: 415 RGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMG 451
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/385 (17%), Positives = 162/385 (42%), Gaps = 37/385 (9%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ +F ++E+ P TY ++ + G+ A FN+M+ G++P +Y +L
Sbjct: 420 EAMLIFTQMQERGV-MPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSL 478
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +C + + +A +++M + +P+ ++++I + R + ++ +
Sbjct: 479 IQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIG 538
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ +T N ++ GYG G ++ VL M+ S +PDV T + +L + G++D
Sbjct: 539 ERPDVITFNSLIDGYGLVGKMEKAFGVLDAMI-SVGIEPDVVTYSALLDGYCRNGRIDDG 597
Query: 306 ERWYEKFRNFGIDPETRTFNILI-GAY------GKKRMY--------------------- 337
+ + + G+ P T T+ I++ G + G K+M
Sbjct: 598 LILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGG 657
Query: 338 -------DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
D+ ++ + + + + + N +I+A + + F+ + A G+ +
Sbjct: 658 LCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPN 717
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
T+ +I G + + L K A + N +I ++ ++ +
Sbjct: 718 ASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLS 777
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEG 475
++ K ++ T S+M ++++G
Sbjct: 778 KVDGKTISLEASTASLMLSLFSRKG 802
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 4/206 (1%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
EML + +P TY +L L G+ A+K+ +EM+E G +L CR
Sbjct: 603 EMLSKG--VKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCR 660
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
N+ DEA ++ + N + ++ +T+I A + E L+ + + PN
Sbjct: 661 NNCDDEAIALFKKLGAM-NVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNAS 719
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
T +++ K G ++ + + S ++E + C P +N I+ V KG++ + K
Sbjct: 720 TYGVMITNLLKEGSVEEADNMFS-LMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSK 778
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMY 337
I E T ++++ + +K Y
Sbjct: 779 VDGKTISLEASTASLMLSLFSRKGKY 804
>gi|298706415|emb|CBJ29411.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 416
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 131/304 (43%), Gaps = 3/304 (0%)
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
GI P+ E Y+ L A + EA V L +M+ + DV YS I AC + R++
Sbjct: 5 GIRPSVESYSIGLTACAKGGRWQEALVLLREMEEDDEIKLDVVAYSAAITACANGGRWQE 64
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
+ DM V PN ++ N + +G+AG + +L GM A PD + NT +
Sbjct: 65 AVAILSDMPNVGVRPNVISCNAAIKAWGEAGQWQHALSILRGM-SKAGLSPDAISYNTAI 123
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY--GKKRMYDKMSSVMEYMRKLQ 351
S GQ + + + GI+P T+N I A G + + +++++M
Sbjct: 124 SALGVAGQSEQAQELMSEMSRLGIEPTVVTYNSAIAAIARGGGGQWRQAVALVKHMSLAG 183
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
S TYN++I A G K + M +G+ D + I+ AG + +
Sbjct: 184 VTPDSITYNSLIVACGKGGQWKQALSVLKGMKKQGLSCDIIGYSAAISACGEAGQWEYSV 243
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
+ A L I ++ Y A ++AC A+ + + K M RPD+ F+ + A
Sbjct: 244 GLLAEAKSLGITPDLVAYTAAVTACADANQRDKATFLLKEMLSAGIRPDAAAFTSLIAAL 303
Query: 472 AKEG 475
+G
Sbjct: 304 GHDG 307
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 118/255 (46%), Gaps = 3/255 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
QW AL + + + P +Y + LG +GQ E A+++ +EM GIEPT Y
Sbjct: 96 QWQHALSILRGMSKAGL-SPDAISYNTAISALGVAGQSEQAQELMSEMSRLGIEPTVVTY 154
Query: 183 TALLAAYCRNSLID-EAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+ +AA R V L + +L PD TY++LI AC +++ ++ + M
Sbjct: 155 NSAIAAIARGGGGQWRQAVALVKHMSLAGVTPDSITYNSLIVACGKGGQWKQALSVLKGM 214
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
++ ++ + + + + G+AG ++ +L+ +S PD+ ++ A+ Q
Sbjct: 215 KKQGLSCDIIGYSAAISACGEAGQWEYSVGLLA-EAKSLGITPDLVAYTAAVTACADANQ 273
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
D ++ + GI P+ F LI A G + + ++E M K+ P + YN
Sbjct: 274 RDKATFLLKEMLSAGIRPDAAAFTSLIAALGHDGQWTQAVEILESMPKMGAPRNAMVYNA 333
Query: 362 VIEAFSDMGDAKHME 376
+I ++++ AK E
Sbjct: 334 LITSWANAEVAKGEE 348
>gi|357144696|ref|XP_003573383.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Brachypodium distachyon]
Length = 606
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/485 (22%), Positives = 219/485 (45%), Gaps = 33/485 (6%)
Query: 1 MGMASASASLSFSSSLLPS-----PLPHPHDTKTNKHRAQVPNFNLIHCSVTSTNKHTSF 55
MG + + LSFSS L + L + K+N+ R +V + K
Sbjct: 5 MGTLGSQSPLSFSSGLCNAKVSCGSLVYNVKIKSNR-RLEVVCQGMFATRKFVRKKKEEV 63
Query: 56 SSESAVAAKKRLWK----EGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTV 111
+++A AK++ W+ E E G + + + RS + P+ + V
Sbjct: 64 FTDAADEAKQKNWRRMMNEIEESGSAVSILKTQRSTKEPLPR---------------DAV 108
Query: 112 AETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMV 171
T K+W ++ E L+ Q ++ E ++ L+ GK G A +V M
Sbjct: 109 LGTLVRFKQLKKWNLVSEILEWLRTQHWWDFSEMDFLMLVTAYGKLGDFSRAERVLKYMN 168
Query: 172 EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRF 231
++G PT TAL+ AY R +A ++M+T +P TY ++K+ V+ ++
Sbjct: 169 KKGYRPTVISQTALMEAYGRAKQYRKAEAVFHRMQT-SGPEPSPITYQIILKSLVEGDKY 227
Query: 232 ELIETLYQDMDERSVT---PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
+ E +++D+ T P+ ++++ Y K+G + Q ++ + M E + V T
Sbjct: 228 KEAEAIFEDLLSEKRTFFKPDQKMFHMMIYMYKKSGDYAQARKLFAQMSERGIPQSTV-T 286
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
N+++S + +V + Y++ + G+ P+ ++++LI AYGK R ++ S+V E M
Sbjct: 287 FNSLMSFEGDYKEVSSI---YDQMQRAGLKPDVVSYSLLIKAYGKARREEEASAVFEEML 343
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
T +YN +++AF+ G + + F+ M ++ D ++ ++ Y NA
Sbjct: 344 DAGIRPTRKSYNILLDAFAISGLVEEAQTVFKTMRRHRVEPDLCSYTTMLLAYVNASDMD 403
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
R + + NV Y ++ K D++ ++ RVY+RM+ + P+ F+ +
Sbjct: 404 GAEKFFRRIKEDGLRPNVVVYGTLMKGYSKLDNVEKVMRVYERMRMQGVEPNQTIFTTIM 463
Query: 469 EAYAK 473
+ + +
Sbjct: 464 DVHGR 468
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 2/188 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P +Y L+ GK+ + E A VF EM++ GI PT + Y LL A+ + L++EA
Sbjct: 313 KPDVVSYSLLIKAYGKARREEEASAVFEEMLDAGIRPTRKSYNILLDAFAISGLVEEAQT 372
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
M+ +PD+ +Y+T++ A V+A + E ++ + E + PN V ++ GY
Sbjct: 373 VFKTMRR-HRVEPDLCSYTTMLLAYVNASDMDGAEKFFRRIKEDGLRPNVVVYGTLMKGY 431
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K +++ RV M +P+ TI+ V W+ + G P+
Sbjct: 432 SKLDNVEKVMRVYERMRMQG-VEPNQTIFTTIMDVHGRNSDFGNAVIWFNEMETRGYPPD 490
Query: 321 TRTFNILI 328
+ NIL+
Sbjct: 491 KKAKNILL 498
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 174/402 (43%), Gaps = 16/402 (3%)
Query: 76 VSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDH--VLKKQWFQALQVFEM 133
V + SIP + P+ NLK + E K+ + + +H L ++F+++ +
Sbjct: 13 VRKPSIP-FVLSTNPVPNLKAENEEKSSVLKEADVLKRLKHEHDITLALEYFKSIANSKS 71
Query: 134 LKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNS 193
K P TY ++ L + + + + +M EGI + +L+ +++ +Y R
Sbjct: 72 FKHTPL------TYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAG 125
Query: 194 LIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQ 253
++A T +M+ +P V Y+ ++ A +D RF++I +Y +M + + PN T
Sbjct: 126 SSEQALKTFYRMQDF-RVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTY 184
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
NI+L K D ++L M S C PD + T++S G+V F
Sbjct: 185 NILLKALCKNNRVDGAHKLLVEM-SSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFT 243
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
P +N LI K+ +++ +++ M +Y +I A SD G+ +
Sbjct: 244 -----PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVE 298
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
+M A G + TF LI G+ G H+ + + + NV YNA++
Sbjct: 299 LSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALM 358
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
L + V+ +M+ C P+ T+S + + YAK G
Sbjct: 359 HGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAG 400
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 136/330 (41%), Gaps = 8/330 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ G A ++ M+ EG+ P Y AL+ C + +A
Sbjct: 314 PNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSV 373
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
NQM+ + C P+V TYS LI A + ++ M PN V ++
Sbjct: 374 FNQME-INGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLC 432
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ MF+Q ++ M + C P+ T NT + G+VD + +++ N G P T
Sbjct: 433 RNSMFNQAYCLIENM-QVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNT 491
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+N L+ + K R + + +++ M TYN +I + G +
Sbjct: 492 TTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGK 551
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE---NVSFYNAVISACIK 438
M G K D T +I+ Y G KV +++L +L + ++ Y ++IS
Sbjct: 552 MVVRGTKPDAITVNIVIDAYCKQG---KVNIAIQLMDRLSAGKWHPDIIAYTSLISGICT 608
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ E +RM + P+ T++++
Sbjct: 609 HIGVEEAIVYLRRMLSEGISPNVATWNVLV 638
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 152/369 (41%), Gaps = 40/369 (10%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
P E +Y L+ L K G+ + AR++ P+ +Y AL+ C+ +EAF
Sbjct: 213 DPDEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQ 267
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVT-QNIVLGG 259
L++M P+V +Y+T+I A DA EL + M R +PN T +++ G
Sbjct: 268 LLDEMMN-KGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGF 326
Query: 260 YGKAG------MFDQMER------------VLSGM---------------LESATCKPDV 286
+ K G +D+M R ++ G+ +E C P+V
Sbjct: 327 FLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNV 386
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
T + ++ +A G +D + G P + ++ + M+++ ++E
Sbjct: 387 RTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIEN 446
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M+ P + T+N I+ G F+QM G +T T+ L++
Sbjct: 447 MQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRR 506
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
F + V+ I N+ YN +I A L E + +M + +PD+ T +I
Sbjct: 507 FGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNI 566
Query: 467 MTEAYAKEG 475
+ +AY K+G
Sbjct: 567 VIDAYCKQG 575
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/371 (19%), Positives = 150/371 (40%), Gaps = 9/371 (2%)
Query: 117 DHVLKKQWFQALQ-VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
D +L + FQ + ++ +K+ +P TY LL L K+ + + A K+ EM +G
Sbjct: 154 DALLDENRFQMINPIYSNMKKDGM-EPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGC 212
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
+P YT L+++ C+ + EA + + P V Y+ LI FE
Sbjct: 213 DPDEVSYTTLISSLCKLGKVKEA------RELAMSFTPSVPVYNALINGVCKEYTFEEAF 266
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
L +M + + PN ++ ++ AG + VL+ M C P++ T +++
Sbjct: 267 QLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARG-CSPNLHTFTSLIKG 325
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
F KG ++++ G+ P +N L+ KR SV M
Sbjct: 326 FFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPN 385
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
TY+ +I+ ++ GD + M G + + C+++ +F++ +
Sbjct: 386 VRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIE 445
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
N +N I + + +V+ +M C P++ T++ + ++ K+
Sbjct: 446 NMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDR 505
Query: 476 MNDKVYALEQE 486
+ + L ++
Sbjct: 506 RFGEAFGLVKD 516
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 4/147 (2%)
Query: 344 MEYMRKL----QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+EY + + F T TY +IE + + ++Y +QM EG+ F +I
Sbjct: 60 LEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIG 119
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
Y AG + + + ++ V YN ++ A + + + +Y MK+ P
Sbjct: 120 SYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEP 179
Query: 460 DSETFSIMTEAYAKEGMNDKVYALEQE 486
+ T++I+ +A K D + L E
Sbjct: 180 NVFTYNILLKALCKNNRVDGAHKLLVE 206
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 143/324 (44%), Gaps = 2/324 (0%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A K+ +EM +G +P Y L+ C+ +DEA LN M + CQP+V T++ ++
Sbjct: 101 AMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSY-GCQPNVITHNIIL 159
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
++ R+ E L DM + +P+ VT NI++ + G+ + +L M C
Sbjct: 160 RSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM-PMHGC 218
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
P+ + N +L F + ++D + + + G P+ T+N L+ A K D
Sbjct: 219 TPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVE 278
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
++ + TYN VI+ S +G + ++M +G+K D T+ L++G +
Sbjct: 279 ILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLS 338
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
G + I L I N YN+++ K+ M K C+P
Sbjct: 339 REGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEA 398
Query: 463 TFSIMTEAYAKEGMNDKVYALEQE 486
T++I+ E A EG+ + L E
Sbjct: 399 TYTILIEGIAYEGLAKEALDLLNE 422
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 123/267 (46%), Gaps = 7/267 (2%)
Query: 123 QWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
+W A ++ +ML++ P T+ L+ L + G A + +M G P
Sbjct: 167 RWMDAEKLLSDMLRKG--CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLS 224
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQD 240
Y LL +C+ +D A L+ M + C PD+ TY+TL+ A C D +E L Q
Sbjct: 225 YNPLLHGFCKEKKMDRAIEYLDIMVSR-GCYPDIVTYNTLLTALCKDGKVDVAVEILNQ- 282
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
+ + +P +T N V+ G K G ++ ++L M KPD+ T ++++S + +G
Sbjct: 283 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGL-KPDIITYSSLVSGLSREG 341
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+VD +++ GI P T+N ++ K R D+ + YM + T +TY
Sbjct: 342 KVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYT 401
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGM 387
+IE + G AK ++ + G+
Sbjct: 402 ILIEGIAYEGLAKEALDLLNELCSRGL 428
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 152/375 (40%), Gaps = 7/375 (1%)
Query: 114 TFSDHVLKKQW-FQALQVFEMLKEQPF-YQPKEGTYMKLLVLLGKSGQPELARKVFNEMV 171
+F D + K+ +A ++ L++ P T+ L+ L K GQ + A VF++M+
Sbjct: 328 SFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMI 387
Query: 172 EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRF 231
G P Y AL+ C+ ++ A + M PDV TYS L+ A A R
Sbjct: 388 AGGYVPNVITYNALVNGLCKADKMERAHAMIESMVD-KGVTPDVITYSVLVDAFCKASRV 446
Query: 232 ELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNT 291
+ L M R TPN VT N ++ G K+ + ++ M PD T T
Sbjct: 447 DEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCT 506
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
++ G+ E + DP+T FN I K + V M +L+
Sbjct: 507 LIDGLFRTGRAGQAEALLDAMP----DPDTYAFNCCINGLSKLGDVSRALQVYNRMLELE 562
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
T+N +I G+ + FE+M A+ ++ D TF LI+G AG
Sbjct: 563 LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAAR 622
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
+ L L + NV YNA++ K+ + E + + M C PDS T+ + A
Sbjct: 623 DILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYAL 682
Query: 472 AKEGMNDKVYALEQE 486
+ D L E
Sbjct: 683 CRASRTDDALQLVSE 697
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 166/368 (45%), Gaps = 18/368 (4%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+++FE L E+ + P TY L+ L K+G E AR++ +M P Y+ L+
Sbjct: 235 GMELFEELVERG-HHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLI 293
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQ--PDVYTYSTLIKA-CVDAMRFELIETLYQDMD- 242
C+ IDEA + +M T +C P++ TY++ + C +M E E + D
Sbjct: 294 NGLCKVGRIDEARELIQEM-TRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDG 352
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
V+P+TVT + ++ G K G D+ V M+ P+V T N +++ +
Sbjct: 353 SLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGY-VPNVITYNALVNGLC---KA 408
Query: 303 DMMERWY---EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
D MER + E + G+ P+ T+++L+ A+ K D+ ++ M T+
Sbjct: 409 DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTF 468
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAE-GMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
N++I+ + F+ M + G+ D T+C LI+G G + + L
Sbjct: 469 NSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTG---RAGQAEALLD 525
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ + +F N I+ K D+ +VY RM E PD TF+I+ K G +
Sbjct: 526 AMPDPDTYAF-NCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFE 584
Query: 479 KVYALEQE 486
+ AL +E
Sbjct: 585 QASALFEE 592
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 144/342 (42%), Gaps = 6/342 (1%)
Query: 147 YMKLLVLLGKSGQPELARKVF-NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
Y +L L ++G+ A ++F EM +G+ PT Y ++ C+++ + ++
Sbjct: 183 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 242
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ PDV TY+TLI + A E L+ DM RS PN VT ++++ G K G
Sbjct: 243 VERGH-HPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGR 301
Query: 266 FDQMERVLSGML-ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRN--FGIDPETR 322
D+ ++ M +S P++ T N+ L + R+ + P+T
Sbjct: 302 IDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTV 361
Query: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
TF+ LI K D+ SV + M + TYN ++ + E M
Sbjct: 362 TFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESM 421
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
+G+ D T+ L++ + A + + + + NV +N++I K+D
Sbjct: 422 VDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRS 481
Query: 443 MEMERVYKRMKEKH-CRPDSETFSIMTEAYAKEGMNDKVYAL 483
E +++ M KH PD T+ + + + G + AL
Sbjct: 482 GEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEAL 523
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 145/347 (41%), Gaps = 30/347 (8%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL--YTALLAAYCRNSLIDEAF 199
P TY L+ L K G+ + AR++ EM+ + + P + Y + L C+ S++ EA
Sbjct: 778 PNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEAC 837
Query: 200 VTLNQMKTLP-NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
+ ++ PD T+STLI + + ++ DM PN VT N+++
Sbjct: 838 ELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMN 897
Query: 259 GYGKAGMFDQMERVLSGMLESATCK---PDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
G K D+MER M+ES K PDV T + ++ F VD +
Sbjct: 898 GLCKT---DKMERA-HAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASR 953
Query: 316 GIDPETRTFNILIGAYGKK-------RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD 368
G P TFN +I K +M+D M+ K TY +I+
Sbjct: 954 GCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMT------LKHGLAPDKITYCTLIDGLFR 1007
Query: 369 MGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSF 428
G A E + M DT F C ING + G + + + +L++ +
Sbjct: 1008 TGWAGQAEVLLDAMP----DPDTYAFNCCINGLSKLGDVSRALHRML---ELELVPDKVT 1060
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+N +I+ KA + + +++ M K+ +PD TF + + K G
Sbjct: 1061 FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAG 1107
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 161/399 (40%), Gaps = 43/399 (10%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QA +FE + + QP T+ L+ L K+GQ E AR + + M G+ P Y AL
Sbjct: 585 QASALFEEMVAKNL-QPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNAL 643
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C++ I+EA L +M + C PD TY +L+ A A R + L ++
Sbjct: 644 VHGLCKSGRIEEACQFLEEMVS-SGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFG 702
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVL------------------------SGMLESA- 280
P+TVT NI++ G K+G +Q VL +G LE A
Sbjct: 703 WDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEAR 762
Query: 281 ------------TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID--PETRTFNI 326
C P+V T + +++ G++D ++ D P T+N
Sbjct: 763 RLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNS 822
Query: 327 LIGAYGKKRMYDKMSSVMEYMR--KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
+ K+ M + +M +R L+ + T++ +I+ G F+ M A
Sbjct: 823 FLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIA 882
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
G + T+ L+NG + + + + +V Y+ ++ A KA + E
Sbjct: 883 GGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDE 942
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ M + C P+ TF+ + + K + + + +
Sbjct: 943 ALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQM 981
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 162/402 (40%), Gaps = 49/402 (12%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
ALQ+ LK + P TY L+ L KSGQ E A V EMV +G P Y L
Sbjct: 690 DALQLVSELKSFG-WDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTL 748
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPN--CQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
+ + C+ ++EA M + + C P+V TYS LI R + L Q+M
Sbjct: 749 IDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMR 808
Query: 244 RS--VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE-SATCKPDVWTMNTILSVFANKG 300
+S V PN +T N L G K M + ++ + + S PD T +T++ G
Sbjct: 809 KSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCG 868
Query: 301 QVD--------------------------------MMERWY---EKFRNFGIDPETRTFN 325
Q D MER + E + G+ P+ T++
Sbjct: 869 QTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYS 928
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
+L+ A+ K D+ ++ M T+N++I+ + F+ M +
Sbjct: 929 VLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLK 988
Query: 386 -GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
G+ D T+C LI+G G + + L + + +F N I+ K L +
Sbjct: 989 HGLAPDKITYCTLIDGLFRTGWAGQ---AEVLLDAMPDPDTYAF-NCCINGLSK---LGD 1041
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ R RM E PD TF+I+ K G ++ AL +E
Sbjct: 1042 VSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEE 1083
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 120/294 (40%), Gaps = 10/294 (3%)
Query: 114 TFSDHVLKKQWF-QALQVFEMLKEQPF-YQPKEGTYMKLLVLLGKSGQPELARKVFNEMV 171
+F D + K+ +A ++ L++ P T+ L+ L K GQ + A VF++M+
Sbjct: 822 SFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMI 881
Query: 172 EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRF 231
G P Y L+ C+ ++ A + M PDV TYS L+ A A
Sbjct: 882 AGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVD-KGVTPDVITYSVLVDAFCKASHV 940
Query: 232 ELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNT 291
+ L M R TPN VT N ++ G K+ + ++ M PD T T
Sbjct: 941 DEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCT 1000
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
++ G E + DP+T FN I K +S + M +L+
Sbjct: 1001 LIDGLFRTGWAGQAEVLLDAMP----DPDTYAFNCCINGLSK---LGDVSRALHRMLELE 1053
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
T+N +I G+ + FE+M A+ ++ D TF LI+G AG
Sbjct: 1054 LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAG 1107
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 160/401 (39%), Gaps = 58/401 (14%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A Q+F+ + + P + TY L+ L ++G+ A + + M P P+ Y
Sbjct: 483 EAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAM------PDPDTYAF- 535
Query: 186 LAAYCRNSL-----IDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
C N L + A N+M L PD T++ LI A FE L+++
Sbjct: 536 --NCCINGLSKLGDVSRALQVYNRMLEL-ELVPDKVTFNILIAGACKAGNFEQASALFEE 592
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M +++ P+ +T ++ G KAG + +L ++ + P+V T N ++ G
Sbjct: 593 MVAKNLQPDVMTFGALIDGLCKAGQVEAARDILD-LMGNLGVPPNVVTYNALVHGLCKSG 651
Query: 301 QVDMMERWYE-----------------------------------KFRNFGIDPETRTFN 325
+++ ++ E + ++FG DP+T T+N
Sbjct: 652 RIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYN 711
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD---AKHMEYTFEQM 382
IL+ K ++ +V+E M TYN +I++ GD A+ +
Sbjct: 712 ILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSR 771
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVR--LASKLQIAENVSFYNAVISACIKAD 440
+ + T+ LING G + ++ + + N+ YN+ + K
Sbjct: 772 VSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQS 831
Query: 441 DLMEMERVYKRMKEKHCR--PDSETFSIMTEAYAKEGMNDK 479
+ E + + +++ R PD+ TFS + + K G D+
Sbjct: 832 MMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDE 872
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 127/286 (44%), Gaps = 16/286 (5%)
Query: 100 RKAKAKAWVNTVA-ETFSDHVLK-KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKS 157
R + +TV T D + K Q +A VF+ + Y P TY L+ L K+
Sbjct: 844 RDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGG-YVPNVVTYNVLMNGLCKT 902
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
+ E A + MV++G+ P Y+ L+ A+C+ S +DEA L+ M + C P+V T
Sbjct: 903 DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMAS-RGCTPNVVT 961
Query: 218 YSTLIKACVDAMRFELIETLYQDMD-ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
++++I + + ++ DM + + P+ +T ++ G + G Q E +L M
Sbjct: 962 FNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAM 1021
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
+ PD + N ++ + G V R + + P+ TFNILI K
Sbjct: 1022 PD-----PDTYAFNCCINGLSKLGDV---SRALHRMLELELVPDKVTFNILIAGACKAGN 1073
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
+++ S++ E M T+ +I+ G +E T++ M
Sbjct: 1074 FEQASALFEEMVAKNLQPDVMTFGALIDGLCKAG---QVEATWDIM 1116
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 122/314 (38%), Gaps = 40/314 (12%)
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
P C+P+ +TYSTL++A A ++ TL RS + + NIVL +AG +
Sbjct: 140 PRCRPNHFTYSTLLRATYKA-GGDVERTLGFFRRIRSSSRSVADYNIVLQSLCRAGETAR 198
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
+ G + P + T NTI++ ++ +E+ G P+ T+N LI
Sbjct: 199 ALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLI 258
Query: 329 GAYGK-------KRMYDKMSS------VMEY---------------MRKLQFPWTSS--- 357
+ K +R++ MSS V+ Y R+L T
Sbjct: 259 DSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCD 318
Query: 358 ------TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA--DTKTFCCLINGYANAGLFHK 409
TYN+ ++ + ++ DT TF LI+G G +
Sbjct: 319 VLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDE 378
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
S NV YNA+++ KAD + + + M +K PD T+S++ +
Sbjct: 379 ACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVD 438
Query: 470 AYAKEGMNDKVYAL 483
A+ K D+ L
Sbjct: 439 AFCKASRVDEALEL 452
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 19/140 (13%)
Query: 357 STYNNVIEAFSDMGD-AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
+ YN V+++ G+ A+ +E +M +G+ T+ +ING + S
Sbjct: 181 ADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIING---------LCKSNE 231
Query: 416 LASKLQIAE---------NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
L + +++ E +V YN +I + KA DL E R++ M + C P+ T+S+
Sbjct: 232 LGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSV 291
Query: 467 MTEAYAKEGMNDKVYALEQE 486
+ K G D+ L QE
Sbjct: 292 LINGLCKVGRIDEARELIQE 311
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 158/349 (45%), Gaps = 5/349 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY LL + ++ E A V +EM +G P Y ++ CR +D+A
Sbjct: 175 QPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARE 234
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
LN++ + QPD +Y+TL+K + R++ +E L+ +M E++ PN VT ++++ +
Sbjct: 235 LLNRLPSY-GFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFF 293
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ GM ++ +VL M E C + N +++ +G+VD + ++G +P+
Sbjct: 294 CRGGMVERAIQVLEQMTEHG-CATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPD 352
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T ++ ++ + +D ++ M + P T+N I G + E
Sbjct: 353 TISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIE 412
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
QM G T+ L+NG+ G + S++ L + N Y +++ A+
Sbjct: 413 QMSEHGCTVGVVTYNALVNGFCVQG---HIDSALELFRSMPCKPNTITYTTLLTGLCNAE 469
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
L + M C P+ TF+++ + ++G ++ L ++ ++
Sbjct: 470 RLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMME 518
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 105/484 (21%), Positives = 191/484 (39%), Gaps = 51/484 (10%)
Query: 58 ESAVAAKKRLWKEGEYPG-VSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAET-- 114
E A+A + +G P V+ I + + + ++ L R +TV+ T
Sbjct: 195 EQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTL 254
Query: 115 FSDHVLKKQWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE 173
K+W ++F EM+++ P E T+ L+ + G E A +V +M E
Sbjct: 255 LKGLCASKRWDDVEELFAEMMEKN--CMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEH 312
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
G L ++ + C+ +D+AF LN M + C PD +Y+T++K A R++
Sbjct: 313 GCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSY-GCNPDTISYTTVLKGLCRAERWDD 371
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
+ L +M + PN VT N + + G+ +Q ++ M E C V T N ++
Sbjct: 372 AKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHG-CTVGVVTYNALV 430
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
+ F +G +D E FR+ P T T+ L+ D + ++ M + P
Sbjct: 431 NGFCVQGHID---SALELFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCP 487
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-------L 406
T+N ++ F G + EQM G + T+ L++G L
Sbjct: 488 PNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALEL 547
Query: 407 FHKVISS------------VRLASK----------LQIAENVSF------YNAVISACIK 438
H ++S + + SK + +++ YN ++ K
Sbjct: 548 LHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCK 607
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGHW 498
++ + M C P+ T+ I+ E A EG+ E + L +L + G
Sbjct: 608 RCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGL-----LKEAQDLLSVLCSRGVL 662
Query: 499 QQNI 502
+N+
Sbjct: 663 NKNL 666
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 133/339 (39%), Gaps = 7/339 (2%)
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
KL+ L + G+ A +V G Y L+A YCR +D A + M
Sbjct: 81 KLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPV- 139
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
PD YTY+ LI+ D R +L DM R PN VT ++L + F+Q
Sbjct: 140 ---APDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQ 196
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
VL M + C P++ T N I++ +G+VD + ++G P+T ++ L+
Sbjct: 197 AMAVLDEM-RAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLL 255
Query: 329 -GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
G KR D E M K P T++ +I F G + EQM G
Sbjct: 256 KGLCASKRWDDVEELFAEMMEKNCMP-NEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGC 314
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
+T +IN G + + Y V+ +A+ + +
Sbjct: 315 ATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKE 374
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ M +C P+ TF+ ++G+ ++ L ++
Sbjct: 375 LLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQ 413
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 133/337 (39%), Gaps = 5/337 (1%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y L+ + G + AR++ M + P YT L+ C + +A L+ M
Sbjct: 114 YNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDML 170
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
CQP+V TY+ L++A FE + +M + TPN VT N+++ G + G
Sbjct: 171 R-RGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRV 229
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
D +L+ L S +PD + T+L + D +E + + P TF++
Sbjct: 230 DDARELLN-RLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDM 288
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
LI + + M ++ V+E M + ++ N VI + G M + G
Sbjct: 289 LIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYG 348
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
DT ++ ++ G A + + + N +N I + + +
Sbjct: 349 CNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAI 408
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ ++M E C T++ + + +G D L
Sbjct: 409 MLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALEL 445
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 163/363 (44%), Gaps = 3/363 (0%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
++ +AL +F+ +K + +P TY L+ L SG E ARK+ +EM ++ I Y
Sbjct: 60 EFGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTY 119
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
++++ + + + +E++ L +M C PDV+ ++ +++ + E +YQ M
Sbjct: 120 SSIIKSLVKEAKPEESYKVLEEMMA-AGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMV 178
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM-LESATCKPDVWTMNTILSVFANKGQ 301
E P+ V+ +I++ G K G D+ ++LS M + +A P+V T +T++ G+
Sbjct: 179 ESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGE 238
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
++ + G P T+ LI + + + E M + P + YN+
Sbjct: 239 LEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNS 298
Query: 362 VIEAFSDMGDAKHMEYTFEQMH-AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+I + G E + +M G++ TF LI+G+ G + V
Sbjct: 299 LIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTK 358
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+A + Y +I+ +A L E VYK+M+EK D + K G D+
Sbjct: 359 GLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQA 418
Query: 481 YAL 483
YA+
Sbjct: 419 YAV 421
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 139/328 (42%), Gaps = 10/328 (3%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L K+G A +VF M E P+ Y L+ + C +A MK +P
Sbjct: 20 LAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEP 79
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
D +TY+TLI + E L +M ++++ N T + ++ K ++ +VL
Sbjct: 80 DRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVL 139
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
M+ +A C PDV+ N ++ FA ++ Y+ G P+ +++ILI K
Sbjct: 140 EEMM-AAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAK 198
Query: 334 KRMYDKMSSVME--YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
D+ ++ MR + T++ +I G+ + F M G K +
Sbjct: 199 IGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNK 258
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDLMEMERV 448
T+ LI G A KVI + L K+ I + YN++I+ K + E E++
Sbjct: 259 YTYTTLIAGLCRA---EKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKL 315
Query: 449 YKRMK-EKHCRPDSETFSIMTEAYAKEG 475
Y+ M +P TF+ + + + K G
Sbjct: 316 YREMSGGAGLQPTIVTFNTLIDGFCKLG 343
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 119/271 (43%), Gaps = 4/271 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMV--EEGIEPTPELYT 183
+A +V++ + E Y+P +Y L+ L K G+ + + K+ +EM G P ++
Sbjct: 169 KAREVYQHMVESG-YKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFS 227
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
L+ CR +++A M C+P+ YTY+TLI A + L++ M +
Sbjct: 228 TLIHGLCRTGELEKALEVFGSMLE-AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQ 286
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+ P+ V N ++ GY K G D+ E++ M A +P + T NT++ F G++
Sbjct: 287 ACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLG 346
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ G+ +T T+ ILI + D+ V + MR+ +F + + +
Sbjct: 347 RANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFV 406
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
G+ FE G + +TF
Sbjct: 407 GGLCKTGNIDQAYAVFEATRKSGAVPNPETF 437
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 129/323 (39%), Gaps = 40/323 (12%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKT-LPNCQPD 214
+S E AR+V+ MVE G +P Y L+ + +DE+ L++M P+
Sbjct: 163 RSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPN 222
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
V T+STLI E ++ M E PN T ++ G +A Q +
Sbjct: 223 VITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFE 282
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRN-FGIDPETRTFNILIGAYGK 333
M + A PD N++++ + +G +D E+ Y + G+ P TFN LI
Sbjct: 283 KMTQ-ACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLI----- 336
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+ F +G +M +G+ ADT T
Sbjct: 337 ------------------------------DGFCKLGKLGRANELVAEMGTKGLAADTCT 366
Query: 394 FCCLINGYANAGLFHKVISSVR-LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
+ LI G + A + + + + K + + VS + V C K ++ + V++
Sbjct: 367 YRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLC-KTGNIDQAYAVFEAT 425
Query: 453 KEKHCRPDSETFSIMTEAYAKEG 475
++ P+ ETF I++E+ K G
Sbjct: 426 RKSGAVPNPETFRILSESLIKLG 448
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 117/267 (43%), Gaps = 14/267 (5%)
Query: 214 DVYTY--STLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
D Y + +L KA + A E+ ET M S P+ VT N+++ AG F +
Sbjct: 11 DAYDFVVQSLAKAGMLAQALEVFET----MKSESCVPSLVTYNVLINSRCNAGEFGKALD 66
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+ M +PD WT NT++S + G + + + R+ I T++ +I +
Sbjct: 67 LFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSL 126
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
K+ ++ V+E M +N V++ F+ + + ++ M G K D
Sbjct: 127 VKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDN 186
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQI-----AENVSFYNAVISACIKADDLMEME 446
++ LI+G A G K+ S+++ S++ + NV ++ +I + +L +
Sbjct: 187 VSYHILIHGLAKIG---KLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKAL 243
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAK 473
V+ M E C+P+ T++ + +
Sbjct: 244 EVFGSMLEAGCKPNKYTYTTLIAGLCR 270
Score = 38.5 bits (88), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 62/141 (43%), Gaps = 1/141 (0%)
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M K + Y+ V+++ + G FE M +E T+ LIN NAG
Sbjct: 1 MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60
Query: 407 FHKVISSVR-LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
F K + + + + ++ + YN +IS + + ++ M++K+ + T+S
Sbjct: 61 FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120
Query: 466 IMTEAYAKEGMNDKVYALEQE 486
+ ++ KE ++ Y + +E
Sbjct: 121 SIIKSLVKEAKPEESYKVLEE 141
>gi|15240649|ref|NP_199839.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170477|sp|Q9FGR7.1|PP426_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g50280, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1006; Flags: Precursor
gi|9759030|dbj|BAB09399.1| unnamed protein product [Arabidopsis thaliana]
gi|332008538|gb|AED95921.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 723
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 177/354 (50%), Gaps = 5/354 (1%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQ-PELARKVFNEMVEEGIEPTPE 180
+++ A +V+E + + Y P T L+ L K+G+ + ++F +M E+G++ + +
Sbjct: 287 QRYDDAWEVYEAMDKINVY-PDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQD 345
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
++ L+ ++C L +EA V +M+ + + Y+TL+ A + E +E L+ +
Sbjct: 346 VFGGLVKSFCDEGLKEEALVIQTEMEK-KGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTE 404
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA-NK 299
M ++ + P+ T NI++ Y + D +E +L M E +P+V + ++S + K
Sbjct: 405 MRDKGLKPSAATYNILMDAYARRMQPDIVETLLREM-EDLGLEPNVKSYTCLISAYGRTK 463
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
DM + + + G+ P + ++ LI AY ++K + E M K + TY
Sbjct: 464 KMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETY 523
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+V++AF GD + ++ M E +K T+ L++G+A GL+ + V SK
Sbjct: 524 TSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSK 583
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ + +V YN +++A + ++ ++ K M + +PDS T+S M A+ +
Sbjct: 584 MGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVR 637
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 158/365 (43%), Gaps = 42/365 (11%)
Query: 151 LVLLGKSGQPELARKVFNEM-VEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LV++G+SG + + M ++E +P + L R + D + L+ LP
Sbjct: 209 LVMMGESGFVKSCLYFYEWMSLQEPSLASPRACSVLFTLLGRERMADYILLLLSN---LP 265
Query: 210 NCQP--DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG--- 264
+ + DV Y+ I + R++ +Y+ MD+ +V P+ VT I++ KAG
Sbjct: 266 DKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSA 325
Query: 265 -----MFDQM--------ERVLSGM-------------------LESATCKPDVWTMNTI 292
+F++M + V G+ +E + + NT+
Sbjct: 326 KEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTL 385
Query: 293 LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF 352
+ + ++ +E + + R+ G+ P T+NIL+ AY ++ D + +++ M L
Sbjct: 386 MDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGL 445
Query: 353 PWTSSTYNNVIEAFSDMGDAKHMEY-TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
+Y +I A+ M F +M G+K + ++ LI+ Y+ +G K
Sbjct: 446 EPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAY 505
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
+S K I +V Y +V+ A ++ D ++ ++K M + + T++ + + +
Sbjct: 506 ASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGF 565
Query: 472 AKEGM 476
AK+G+
Sbjct: 566 AKQGL 570
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 116/255 (45%), Gaps = 3/255 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNS-LIDEAF 199
+P TY L+ + QP++ + EM + G+EP + YT L++AY R + D A
Sbjct: 411 KPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAA 470
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+MK + +P ++Y+ LI A + E +++M + + P+ T VL
Sbjct: 471 DAFLRMKKV-GLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDA 529
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ ++G ++ + ML K T NT+L FA +G +F G+ P
Sbjct: 530 FRRSGDTGKLMEIWKLMLREK-IKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQP 588
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
T+N+L+ AY + K+ +++ M L S TY+ +I AF + D K +
Sbjct: 589 SVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYH 648
Query: 380 EQMHAEGMKADTKTF 394
+ M G D +++
Sbjct: 649 KMMVKSGQVPDPRSY 663
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 7/185 (3%)
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
E+FR+ R +N I + YD V E M K+ + T +I
Sbjct: 268 EEFRD------VRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKA 321
Query: 370 G-DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSF 428
G AK + FE+M +G+K F L+ + + GL + + K I N
Sbjct: 322 GRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIV 381
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
YN ++ A K++ + E+E ++ M++K +P + T++I+ +AYA+ D V L +E
Sbjct: 382 YNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREME 441
Query: 489 QMLLE 493
+ LE
Sbjct: 442 DLGLE 446
>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
Length = 609
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 163/355 (45%), Gaps = 4/355 (1%)
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
+F L EQ ++P TY L+ L + + + + +EM E GI+P L A++ A+
Sbjct: 79 IFNSLVEQG-HRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILLNAIINAF 137
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS-VTP 248
+ + EA +M+ C+P T++TLIK + E L + M + + P
Sbjct: 138 SESGNVKEAMEIFQKMEE-SGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTNLKP 196
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW 308
N T NI++G K + V+ ML S +PDV T NT+ +A G+ + E
Sbjct: 197 NNRTYNILVGALCKKKSIKEAWNVVHQMLASGV-QPDVVTYNTLARAYAQDGETNKAESI 255
Query: 309 YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD 368
N ++P RT I++G Y ++ + V+ MR L +N++I+ F D
Sbjct: 256 IVDMLNKKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLD 315
Query: 369 MGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSF 428
+GD+ ++ M G+K D TF ++NG+++AG K K I ++
Sbjct: 316 IGDSDGVDKALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHV 375
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
++ + ++A + ++ E + M + RP+ F+ + + G +K + +
Sbjct: 376 FSILAKGFVRAGEPVKAESLLNFMSKYGVRPNVVIFTTIISGWCTAGKMEKAWKV 430
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 168/381 (44%), Gaps = 7/381 (1%)
Query: 108 VNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
+N + FS+ K+ A+++F+ + E+ +P T+ L+ G +PE + K+
Sbjct: 130 LNAIINAFSESGNVKE---AMEIFQKM-EESGCKPTTSTFNTLIKGYGIIRKPEESMKLL 185
Query: 168 NEMVEE-GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
M ++P Y L+ A C+ I EA+ ++QM QPDV TY+TL +A
Sbjct: 186 ELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQM-LASGVQPDVVTYNTLARAYA 244
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
E++ DM + V PN T I++GGY + G + RV+ M + P++
Sbjct: 245 QDGETNKAESIIVDMLNKKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGI-HPNL 303
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
N+++ F + G D +++ G+ P+ TF+ ++ + DK + +
Sbjct: 304 VIFNSLIKGFLDIGDSDGVDKALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDD 363
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M K ++ + + F G+ E M G++ + F +I+G+ AG
Sbjct: 364 MLKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNFMSKYGVRPNVVIFTTIISGWCTAGK 423
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
K + ++ N+ + +I +A E + + M+E + P++ T +
Sbjct: 424 MEKAWKVFEHMCDMDVSPNLKTFETLIWGYGEAKQPWRAEEILQMMEEMNVVPENSTLKL 483
Query: 467 MTEAYAKEGMNDKVYALEQEK 487
++EA+ GM + A E+
Sbjct: 484 VSEAWRSIGMVNDAKAERTEE 504
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 147/350 (42%), Gaps = 38/350 (10%)
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
KL+ +L + G+P+ A+ +FN +VE+G PT
Sbjct: 62 KLMNILVERGKPQEAQFIFNSLVEQGHRPT------------------------------ 91
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
TY+ L+ A RF+ I L +M+E + P+++ N ++ + ++G +
Sbjct: 92 ------TVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILLNAIINAFSESGNVKE 145
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF-RNFGIDPETRTFNIL 327
+ M ES CKP T NT++ + + + + E R + P RT+NIL
Sbjct: 146 AMEIFQKMEESG-CKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTNLKPNNRTYNIL 204
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
+GA KK+ + +V+ M TYN + A++ G+ E M + +
Sbjct: 205 VGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNKKV 264
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
+ +T ++ GY G + + V L I N+ +N++I + D +++
Sbjct: 265 NPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDK 324
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
M+E +PD TFS + ++ G DK + + L+ +E H
Sbjct: 325 ALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIH 374
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 159/335 (47%), Gaps = 10/335 (2%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
Y L+ G + + +F+EM+E+GI P +Y+ L+ +C+ L EA L+ M
Sbjct: 82 VYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTM 141
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
T QPDVYTY+ +I R L+ M E+ P+TVT N+++ G K G
Sbjct: 142 -TERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGC 200
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG--IDPETRT 323
++ MLE + +V + NT++ N G++D + + G ++P+ T
Sbjct: 201 IGDAFKIFETMLEKGK-RLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVIT 259
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
FN +I K+ DK + + M + T + +I + G ++++H
Sbjct: 260 FNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVH 319
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE---NVSFYNAVISACIKAD 440
G+ + T+ +I+G+ H + + L S+++I+ + YN ++++ K
Sbjct: 320 KLGLVPSSTTYSVMIDGFCK---MHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKES 376
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
L + R+++ MKE +C PD+ +F+IM + K G
Sbjct: 377 SLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAG 411
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 156/362 (43%), Gaps = 8/362 (2%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
K W +A V + E+ QP TY ++ L K G+ A +F+ M E+G EP+
Sbjct: 128 KGLWREATAVLHTMTERGI-QPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTV 186
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
Y L+ C+ I +AF M + +V +Y+TLI + + + L+
Sbjct: 187 TYNVLINGLCKEGCIGDAFKIFETMLEKGK-RLEVVSYNTLIMGLCNNGKLDEAMKLFSS 245
Query: 241 M--DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
+ D V P+ +T N V+ G K G D+ + M+E + +++T + ++ +
Sbjct: 246 LLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGS-FGNLFTCHILIGEYIK 304
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
G +D +++ G+ P + T++++I + K M + + M+ T
Sbjct: 305 SGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFD 364
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN ++ + + F++M + DT +F +I+G AG H +
Sbjct: 365 YNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQ 424
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
++ + + Y++ I+ K + E + + M PD+ + + + + G+ND
Sbjct: 425 QMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGF---GLND 481
Query: 479 KV 480
++
Sbjct: 482 EI 483
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 162/357 (45%), Gaps = 37/357 (10%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F+++ E+ +P TY L+ L K G A K+F M+E+G Y L
Sbjct: 168 KALDLFDLMTEKG-EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTL 226
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPN-CQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
+ C N +DEA + + N +PDV T++T+I+ R + +Y M ER
Sbjct: 227 IMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIER 286
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQ-ME---RVLS-GMLESAT---------CK------- 283
N T +I++G Y K+G+ D+ ME RV G++ S+T CK
Sbjct: 287 GSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFA 346
Query: 284 -------------PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
P ++ NT+++ + ++ R +++ + +P+T +FNI+I
Sbjct: 347 KGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDG 406
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
K ++ M+++ + TY++ I S +G + + F+ M A G+ D
Sbjct: 407 TLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPD 466
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVIS-ACIKADDLMEME 446
+ LI G+ +VI+ +R + + + ++ N++++ C A+ L ME
Sbjct: 467 NHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVME 523
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 147/343 (42%), Gaps = 22/343 (6%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P +Y ++ L K + E A + EM EP Y L+ C+ ++EA
Sbjct: 8 PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67
Query: 202 LNQMKTLPNCQPDVYTYSTLI-----KACVDAMRFELIETLYQDMDERSVTPNTVTQNIV 256
L +MK + DV YSTLI K C+D + L+ +M E+ ++PN V + +
Sbjct: 68 LGEMKR-KGLEVDVVVYSTLISGFCSKGCLDRGK-----ALFDEMLEKGISPNVVVYSCL 121
Query: 257 LGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ----VDMMERWYEKF 312
+ G+ K G++ + VL M E +PDV+T ++ G+ +D+ + EK
Sbjct: 122 INGFCKKGLWREATAVLHTMTERGI-QPDVYTYTCMIGGLCKDGRARKALDLFDLMTEK- 179
Query: 313 RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
G +P T T+N+LI K+ + E M + +YN +I + G
Sbjct: 180 ---GEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKL 236
Query: 373 KHMEYTFEQMHAEG--MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYN 430
F + +G ++ D TF +I G G K + + N+ +
Sbjct: 237 DEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCH 296
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+I IK+ + + ++KR+ + P S T+S+M + + K
Sbjct: 297 ILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCK 339
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 123/273 (45%), Gaps = 5/273 (1%)
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
N PD+ +Y+T+I R E L +M+ S PN+ T I++ G K G ++
Sbjct: 5 NILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEA 64
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
R+L G ++ + DV +T++S F +KG +D + +++ GI P ++ LI
Sbjct: 65 MRLL-GEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLIN 123
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+ KK ++ + ++V+ M + TY +I G A+ F+ M +G +
Sbjct: 124 GFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEP 183
Query: 390 DTKTFCCLINGYANAGLFHKVISSVR-LASKLQIAENVSFYNAVISACIKADDLMEMERV 448
T T+ LING G + K + E VS YN +I L E ++
Sbjct: 184 STVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVS-YNTLIMGLCNNGKLDEAMKL 242
Query: 449 YKRMKE--KHCRPDSETFSIMTEAYAKEGMNDK 479
+ + E + PD TF+ + + KEG DK
Sbjct: 243 FSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDK 275
>gi|307103654|gb|EFN51912.1| hypothetical protein CHLNCDRAFT_59068 [Chlorella variabilis]
Length = 1025
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 151/348 (43%), Gaps = 12/348 (3%)
Query: 137 QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY--------TALLAA 188
Q Y G LL L KSG A+++F+ + G++ + +LY T +++
Sbjct: 147 QGLYYFDSGALAALLKELNKSGHVRRAQELFDWL--RGLDDSHDLYPLCNTMTYTTMISQ 204
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP 248
+ A + +M++ Q +V+TYS L+ C+ +L +Y+ M TP
Sbjct: 205 CGTQQQLRRALELVAEMRSR-GIQCNVHTYSALMNVCIKGNELDLALDVYRQMLAEGCTP 263
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW 308
N VT N ++ YGK G +++ RVL LE P++ T NT++ GQ R
Sbjct: 264 NLVTYNTLIDVYGKTGAWEEAIRVLDA-LERQGIDPEIRTYNTVIIACNMSGQAQEALRI 322
Query: 309 YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD 368
YE+ G P T+ LI AYGK D+ + + M + TY+++I A
Sbjct: 323 YERMLAAGAQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEK 382
Query: 369 MGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSF 428
G + F +MH EG + + T+ LI A + K +
Sbjct: 383 AGRWELALELFREMHTEGCRPNVVTYNSLIAACAQGAQWEKAQEMFEQMQHRGCKPDAVT 442
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ +I+A +A +++MK +CRPDS ++ + A K G+
Sbjct: 443 FGGLIAAYDRAGHWRRALTAFEQMKAHNCRPDSVVYNTIVGALWKTGL 490
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 3/210 (1%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
W +A++V + L+ Q P+ TY +++ SGQ + A +++ M+ G +PT YT
Sbjct: 281 WEEAIRVLDALERQGI-DPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGAQPTATTYT 339
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
AL++AY +N +D A M C+ +V TYS+LI AC A R+EL L+++M
Sbjct: 340 ALISAYGKNGQLDRALQIFQDM-VRRGCERNVITYSSLISACEKAGRWELALELFREMHT 398
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
PN VT N ++ + +++ + + M + CKPD T +++ + G
Sbjct: 399 EGCRPNVVTYNSLIAACAQGAQWEKAQEMFEQM-QHRGCKPDAVTFGGLIAAYDRAGHWR 457
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGK 333
+E+ + P++ +N ++GA K
Sbjct: 458 RALTAFEQMKAHNCRPDSVVYNTIVGALWK 487
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 126/296 (42%), Gaps = 43/296 (14%)
Query: 232 ELIETLYQDMDERSVTP--NTVTQNIVLGGYGKAGMFDQMERVLSGMLE--SATCKPDVW 287
EL + L D + P NT+T ++ + G Q+ R L + E S + +V
Sbjct: 175 ELFDWLRGLDDSHDLYPLCNTMTYTTMIS---QCGTQQQLRRALELVAEMRSRGIQCNVH 231
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T + +++V ++D+ Y + G P T+N LI YGK +++ V++ +
Sbjct: 232 TYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYNTLIDVYGKTGAWEEAIRVLDAL 291
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-- 405
+ TYN VI A + G A+ +E+M A G + T+ LI+ Y G
Sbjct: 292 ERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGAQPTATTYTALISAYGKNGQL 351
Query: 406 --------------------LFHKVISSVRLASKLQIA-------------ENVSFYNAV 432
+ +IS+ A + ++A NV YN++
Sbjct: 352 DRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELALELFREMHTEGCRPNVVTYNSL 411
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALEQEK 487
I+AC + + + ++++M+ + C+PD+ TF + AY + G + A EQ K
Sbjct: 412 IAACAQGAQWEKAQEMFEQMQHRGCKPDAVTFGGLIAAYDRAGHWRRALTAFEQMK 467
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 167/373 (44%), Gaps = 20/373 (5%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+++FE L E+ + P TY L+ L K+G E AR++ +M G P Y+ L+
Sbjct: 56 GMELFEELVERG-HHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLI 114
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQ--PDVYTYSTLIKA-CVDAMRFELIETLYQDMD- 242
C+ IDEA + +M T +C P++ TY++ + C +M E E + D
Sbjct: 115 NGLCKVGRIDEARELIQEM-TRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDG 173
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
V+P+TVT + ++ G K G D+ V M+ P+V T N +++ +
Sbjct: 174 SLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGY-VPNVITYNALVNGLC---KA 229
Query: 303 DMMERWY---EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR------KLQFP 353
D MER + E + G+ P+ T+++L+ A+ K D+ ++ M + P
Sbjct: 230 DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVP 289
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
T+N +I G+ + FE+M A+ ++ D TF LI+G AG
Sbjct: 290 -DKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDI 348
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ L L + NV YNA++ K+ + E + + M C PDS T+ + A +
Sbjct: 349 LDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCR 408
Query: 474 EGMNDKVYALEQE 486
D L E
Sbjct: 409 ASRTDDALQLVSE 421
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 143/308 (46%), Gaps = 7/308 (2%)
Query: 114 TFSDHVLK-KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE 172
T D + K Q +A VF+ + Y P TY L+ L K+ + E A + MV+
Sbjct: 186 TLIDGLCKCGQIDEACSVFDDMIAGG-YVPNVITYNALVNGLCKADKMERAHAMIESMVD 244
Query: 173 EGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKT---LPNC-QPDVYTYSTLIKACVDA 228
+G+ P Y+ L+ A+C+ S +DEA L+ M + PN PD T++ LI A
Sbjct: 245 KGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKA 304
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
FE L+++M +++ P+ +T ++ G KAG + +L ++ + P+V T
Sbjct: 305 GNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILD-LMGNLGVPPNVVT 363
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
N ++ G+++ ++ E+ + G P++ T+ L+ A + D ++ ++
Sbjct: 364 YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELK 423
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
+ + TYN +++ G + E+M +G + D+ TF +G +G
Sbjct: 424 SFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLA 483
Query: 409 KVISSVRL 416
+ +R+
Sbjct: 484 GTMELLRV 491
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 142/369 (38%), Gaps = 44/369 (11%)
Query: 114 TFSDHVLKKQW-FQALQVFEMLKEQPF-YQPKEGTYMKLLVLLGKSGQPELARKVFNEMV 171
+F D + K+ +A ++ L++ P T+ L+ L K GQ + A VF++M+
Sbjct: 149 SFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMI 208
Query: 172 EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRF 231
G P Y AL+ C+ ++ A + M PDV TYS L+ A A R
Sbjct: 209 AGGYVPNVITYNALVNGLCKADKMERAHAMIESMVD-KGVTPDVITYSVLVDAFCKASRV 267
Query: 232 ELIETLYQDMDERSVTPNT-----VTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
+ L M R TPN VT NI++ G KAG F+Q + M+ + +PDV
Sbjct: 268 DEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMV-AKNLQPDV 326
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
T ++ GQV+ + N G+ P T+N L+ K ++ +E
Sbjct: 327 MTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEE 386
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M S TY +++ A ++ + G DT T+ L++G +G
Sbjct: 387 MVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGK 446
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ I+ V + M K +PDS TF+
Sbjct: 447 TEQAIT-----------------------------------VLEEMVGKGHQPDSFTFAA 471
Query: 467 MTEAYAKEG 475
+ G
Sbjct: 472 CFSGLHRSG 480
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 126/314 (40%), Gaps = 10/314 (3%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y +L + CR A P + TY+T+I + L++++
Sbjct: 4 YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
ER P+ VT N ++ KAG ++ R L G + S C P+V T + +++ G+
Sbjct: 64 VERGHHPDVVTYNTLIDSLCKAGDLEEARR-LHGDMSSRGCVPNVVTYSVLINGLCKVGR 122
Query: 302 VDMMERWYEKFRNFGID--PETRTFNILIGAYGKKRMYDKMSSVMEYMR--KLQFPWTSS 357
+D ++ D P T+N + K+ M + +M +R L+ +
Sbjct: 123 IDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTV 182
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
T++ +I+ G F+ M A G + T+ L+NG A + + +
Sbjct: 183 TFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESM 242
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP-----DSETFSIMTEAYA 472
+ +V Y+ ++ A KA + E + M + C P D TF+I+
Sbjct: 243 VDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGAC 302
Query: 473 KEGMNDKVYALEQE 486
K G ++ AL +E
Sbjct: 303 KAGNFEQASALFEE 316
>gi|242050640|ref|XP_002463064.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
gi|241926441|gb|EER99585.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
Length = 558
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 175/358 (48%), Gaps = 16/358 (4%)
Query: 157 SGQPELARKVFNEM-VEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
SG + A VF M ++E ++Y ++ + R++ +D+A +M+ C+PD
Sbjct: 130 SGSLKHAVHVFRWMKIQENYCARNDIYGMMIRLHARHNQVDQARGLFFEMQEW-RCKPDT 188
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
TY++LI A A ++ + DM ++ P+ T N V+ G AG + + +
Sbjct: 189 DTYNSLIHAHARAGQWRWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALELCKK 248
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
M E+ PD+ T N +LS F N Q ++E ++ + P+T T NI+I K
Sbjct: 249 MTENGV-GPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKVA 307
Query: 336 MYDKMSSVMEYMRKLQ--FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+Y + + MR+ + P TY +++ ++S G A++ + F+ M AEG++ + +
Sbjct: 308 LYGEAIELFNSMRERRTICPPDVVTYTSIMYSYSVCGQAENCKAVFDMMVAEGVRPNIVS 367
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+ L+ YA+ G+ + + + +L + ++ Y ++++A ++ + V+ M+
Sbjct: 368 YNALLGAYASHGMHTEALETFKLLKQNGFKPDIVSYTSLLNAYGRSALPEKAREVFNEMR 427
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDKVYAL----EQEKLQ-------MLLEASGHWQQ 500
+ C+P+ +++ + +AY GM + +L EQ+ +Q LL A G +Q
Sbjct: 428 KNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTACGRCRQ 485
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/420 (20%), Positives = 167/420 (39%), Gaps = 70/420 (16%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
A+ VF +K Q Y + Y ++ L + Q + AR +F EM E +P + Y +L
Sbjct: 135 HAVHVFRWMKIQENYCARNDIYGMMIRLHARHNQVDQARGLFFEMQEWRCKPDTDTYNSL 194
Query: 186 LAAYCR--------------------------NSLIDEAFVTLNQMKTLPNCQ------- 212
+ A+ R N++I+ N K L C+
Sbjct: 195 IHAHARAGQWRWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGV 254
Query: 213 -PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
PD+ T++ ++ A + ++ ++ M V P+T T NIV+ K ++ +
Sbjct: 255 GPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKVALYGEAIE 314
Query: 272 VLSGMLESAT-CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
+ + M E T C PDV T +I+ ++ GQ + + ++ G+ P ++N L+GA
Sbjct: 315 LFNSMRERRTICPPDVVTYTSIMYSYSVCGQAENCKAVFDMMVAEGVRPNIVSYNALLGA 374
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
Y M+ + + +++ F +Y +++ A+ + F +M K +
Sbjct: 375 YASHGMHTEALETFKLLKQNGFKPDIVSYTSLLNAYGRSALPEKAREVFNEMRKNACKPN 434
Query: 391 TKTFCCLINGYANAGLFHKVIS-------------------------SVRLASKLQIAE- 424
++ LI+ Y +AG+ + IS R +K+ I
Sbjct: 435 KVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTACGRCRQPTKIGIILA 494
Query: 425 ---------NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
N YN+ I + + D + +Y M+ + +PD+ T++I+ K G
Sbjct: 495 AAKSRGIQLNTVAYNSGIGSYLSLGDYKKALELYTSMRTGNVKPDAVTYNILISGSCKLG 554
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 120/285 (42%), Gaps = 38/285 (13%)
Query: 126 QALQVFEMLKEQPFYQPKEG-TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+A+++F ++E+ P + TY ++ GQ E + VF+ MV EG+ P Y A
Sbjct: 311 EAIELFNSMRERRTICPPDVVTYTSIMYSYSVCGQAENCKAVFDMMVAEGVRPNIVSYNA 370
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
LL AY + + EA T +K +PD+ +Y++L
Sbjct: 371 LLGAYASHGMHTEALETFKLLKQ-NGFKPDIVSYTSL----------------------- 406
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
L YG++ + ++ V + M ++A CKP+ + N ++ + + G +
Sbjct: 407 ------------LNAYGRSALPEKAREVFNEMRKNA-CKPNKVSYNALIDAYGSAGMLKE 453
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ GI P+ + + L+ A G+ R K+ ++ + + YN+ I
Sbjct: 454 AISLLHEMEQDGIQPDVISISTLLTACGRCRQPTKIGIILAAAKSRGIQLNTVAYNSGIG 513
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
++ +GD K + M +K D T+ LI+G G F K
Sbjct: 514 SYLSLGDYKKALELYTSMRTGNVKPDAVTYNILISGSCKLGSFRK 558
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 161/358 (44%), Gaps = 7/358 (1%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
+ML+ + QP TY LL + KS A KV +EM +G P Y ++ CR
Sbjct: 162 DMLRRE--CQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCR 219
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
+D+A LN++ + QPD +Y+T++K A R+E +E L+ +M E + PN V
Sbjct: 220 EDRVDDARQILNRLSSY-GFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEV 278
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
T ++++ + + GM ++ VL M E C + N +++ +G+VD +
Sbjct: 279 TFDMLVRFFCRGGMVERAIEVLDRMSEHG-CTANTTLCNIVINSICKQGRVDDAFEFLNN 337
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
++G P+T ++ ++ + ++ ++ M + P T+N I G
Sbjct: 338 MGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGL 397
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNA 431
EQM G T+ L+NG+ G +V S++ L + L N Y
Sbjct: 398 IDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQG---RVDSALELFNSLPCEPNTITYTT 454
Query: 432 VISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+++ A+ L + M + C + TF+++ + ++G ++ L Q+ ++
Sbjct: 455 LLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMME 512
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 160/391 (40%), Gaps = 43/391 (10%)
Query: 122 KQWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
K+W +F EM++ P E T+ L+ + G E A +V + M E G
Sbjct: 256 KRWEDVEVLFCEMVENNCV--PNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTT 313
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
L ++ + C+ +D+AF LN M + C PD +Y+T++K A R+E + L +
Sbjct: 314 LCNIVINSICKQGRVDDAFEFLNNMGSY-GCSPDTISYTTVLKGLCRAGRWEDAKELLNE 372
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M ++ PN VT N + + G+ DQ ++ M E C + T N +++ F +G
Sbjct: 373 MVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYG-CSVGIVTYNALVNGFCVQG 431
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+VD E F + +P T T+ L+ D + ++ M + P T+N
Sbjct: 432 RVD---SALELFNSLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFN 488
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA-----------GLFHK 409
++ F G + +QM G + TF L++G GL K
Sbjct: 489 VLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSK 548
Query: 410 VIS-------SV--------RLASKLQIAENVS---------FYNAVISACIKADDLMEM 445
IS S+ R+ +Q+ V YN ++SA K +
Sbjct: 549 GISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRA 608
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ M C P+ T+ I+ E A+EG+
Sbjct: 609 IDFFAHMVSNSCMPNESTYVILIEGLAREGL 639
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 135/339 (39%), Gaps = 7/339 (2%)
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
KL+ L + G+ A +V G Y L+A YCR +D A + M
Sbjct: 75 KLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMPV- 133
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
PD YTY+ LI+ D R +L DM R P+ VT ++L K+ F Q
Sbjct: 134 ---PPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQ 190
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF-NIL 327
+VL M + C P++ T N I++ + +VD + + ++G P+T ++ +L
Sbjct: 191 AMKVLDEM-RAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVL 249
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
G KR D E + P T++ ++ F G + ++M G
Sbjct: 250 KGLCAAKRWEDVEVLFCEMVENNCVP-NEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGC 308
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
A+T +IN G + + + Y V+ +A + +
Sbjct: 309 TANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKE 368
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ M K+C P+ TF+ ++G+ D+ L ++
Sbjct: 369 LLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQ 407
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 137/338 (40%), Gaps = 7/338 (2%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y L+ + G+ + AR++ M + P YT L+ C + +A L+ M
Sbjct: 108 YNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDML 164
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
CQP V TY+ L++A + F + +M + TPN VT N+++ G +
Sbjct: 165 R-RECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRV 223
Query: 267 DQMERVLSGMLESATCKPDVWTMNTIL-SVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D ++L+ L S +PD + T+L + A K D+ + E N + P TF+
Sbjct: 224 DDARQILN-RLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCV-PNEVTFD 281
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
+L+ + + M ++ V++ M + ++ N VI + G M +
Sbjct: 282 MLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSY 341
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G DT ++ ++ G AG + + + N +N I + + +
Sbjct: 342 GCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQA 401
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ ++M E C T++ + + +G D L
Sbjct: 402 ILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALEL 439
>gi|302782654|ref|XP_002973100.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
gi|300158853|gb|EFJ25474.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
Length = 674
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 186/419 (44%), Gaps = 15/419 (3%)
Query: 77 SETSIPGYRSKRTP--------IKNLKKKLERKAKAKAWVNTVAETFSDHVLKK--QWFQ 126
S +IP Y +K TP +K L+K +A ++W +++ VL +W +
Sbjct: 66 SAKTIPRY-TKWTPQFARVDEVLKILQKTGNVEAALESWDKSLSAKNIVTVLNNINRWEK 124
Query: 127 ALQVFEMLKEQP-FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
AL FE LK +P Y+ TY +L +L Q EL+ K+ EM GI+P ++ L
Sbjct: 125 ALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFSTL 184
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ R +EA +MK+ PD TY+++I R LY+ + +
Sbjct: 185 INCAKRCRQPEEALKWFERMKS-EGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVN 243
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+TVT + Y +AG + + +++ M +S + P+ MNT++ + G+V+
Sbjct: 244 WKLDTVTYGAIANVYARAGDYQSIIQLVQEMRDSGS-SPNAVIMNTLMGTLSKAGKVNQA 302
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++ + + R G+ P T +IL+ Y + YD+ V E ++ + + YN++++A
Sbjct: 303 KKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKA 362
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ G + E ++M G D T+ +N YA G+ L +
Sbjct: 363 CVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNGKPD 422
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKH-CRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ +I AC A ++ + +++ M E C PD ++ A +D+ A+
Sbjct: 423 TPLFTVMIRACKLAGEIEQASKIFDEMMESGCCSPDERVSGMLLSCMAMAKNDDERLAI 481
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 156/352 (44%), Gaps = 42/352 (11%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y P Y +L+ L + P AR+ F+ M+ +G+
Sbjct: 119 YAPSVLAYNAVLLALSDASLPS-ARRFFDSMLSDGV------------------------ 153
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
P+VYTY+ L++A C R E + L +DM PN VT N ++
Sbjct: 154 ------------APNVYTYNILVRALCGRGHRKEALSVL-RDMRGAGCDPNAVTYNTLVA 200
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
+ +AG D+ ER++ M E KP++ T N++++ G+++ + +++ G+
Sbjct: 201 AFCRAGEVDRAERLVDMMREGGL-KPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLA 259
Query: 319 PETRTFNILIGAYGKKRM-YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P+ ++N L+G Y K ++ +S E RK P T+ ++I G+ +
Sbjct: 260 PDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDV-VTFTSLIHVMCKAGNLERAVG 318
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
+M G++ + TF LI+G+ G + +VR + +I +V YNA+I+
Sbjct: 319 LVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYC 378
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ E + + M+ K +PD T+S + AY K G + L Q+ L+
Sbjct: 379 MVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLE 430
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 152/348 (43%), Gaps = 2/348 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L G + A V +M G +P Y L+AA+CR +D A
Sbjct: 155 PNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERL 214
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
++ M+ +P++ T+++++ A R E ++ +M + + P+ V+ N ++GGY
Sbjct: 215 VDMMRE-GGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYC 273
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G + V + M PDV T +++ V G ++ + R G+
Sbjct: 274 KVGCSHEALSVFAEMTRKGI-MPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNE 332
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
TF LI + KK D + MR+ + + YN +I + +G +
Sbjct: 333 ITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVRE 392
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M A+G+K D T+ +++ Y G H + + + + Y+++I +
Sbjct: 393 MEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKR 452
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
L + ++K M +PD T++ + + + KEG ++ +L E ++
Sbjct: 453 LGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVK 500
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 177/417 (42%), Gaps = 59/417 (14%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A ++ +M++E +P T+ ++ + K+G+ E ARKVF+EMV+EG+ P Y L
Sbjct: 210 RAERLVDMMREGGL-KPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTL 268
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ YC+ EA +M T PDV T+++LI A E L ++M ER
Sbjct: 269 VGGYCKVGCSHEALSVFAEM-TRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERG 327
Query: 246 -----------------------------------VTPNTVTQNIVLGGYGKAGMFDQME 270
+ P+ V N ++ GY G D+
Sbjct: 328 LQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEAR 387
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
++ M E+ KPDV T +TILS + G + ++ G+ P+ T++ LI
Sbjct: 388 ELVREM-EAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRV 446
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
+++ + + M L TY ++I+ G+ + ++M G+ D
Sbjct: 447 LCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPD 506
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSF---YNAVISACIKAD------- 440
T+ LING + + + + RL KL E V Y+A++ C A+
Sbjct: 507 VVTYSVLINGLSKSA---RTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLAL 563
Query: 441 -------DLM-EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
LM E ++VY+ + +++ D +S++ + +EG K + ++ LQ
Sbjct: 564 LKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQ 620
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 105/249 (42%), Gaps = 2/249 (0%)
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P+ + N VL A + R ML P+V+T N ++ +G
Sbjct: 120 APSVLAYNAVLLALSDASL-PSARRFFDSMLSDGV-APNVYTYNILVRALCGRGHRKEAL 177
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
R G DP T+N L+ A+ + D+ +++ MR+ T+N+V+
Sbjct: 178 SVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGI 237
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G + F++M EG+ D ++ L+ GY G H+ +S ++ I +V
Sbjct: 238 CKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDV 297
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ ++I KA +L + + M+E+ + + TF+ + + + K+G D +E
Sbjct: 298 VTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVRE 357
Query: 487 KLQMLLEAS 495
Q ++ S
Sbjct: 358 MRQCRIQPS 366
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/405 (20%), Positives = 162/405 (40%), Gaps = 53/405 (13%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL VF + + P T+ L+ ++ K+G E A + EM E G++ +TAL
Sbjct: 280 EALSVFAEMTRKGI-MPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTAL 338
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +C+ +D+A + + +M+ QP V Y+ LI R + L ++M+ +
Sbjct: 339 IDGFCKKGFLDDALLAVREMRQC-RIQPSVVCYNALINGYCMVGRMDEARELVREMEAKG 397
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
V P+ VT + +L Y K G ++ MLE+ PD T ++++ V + ++
Sbjct: 398 VKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGV-LPDAITYSSLIRVLCEEKRLGDA 456
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++ + G+ P+ T+ LI + K+ ++ S+ + M K TY+ +I
Sbjct: 457 HVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLING 516
Query: 366 FSDMGDAKHME-YTFEQMHAEGMKADTK---------------------TFC-------- 395
S K + F+ H E + A+ K FC
Sbjct: 517 LSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEA 576
Query: 396 --------------------CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
LI+G+ G K +S + + A N + ++I
Sbjct: 577 DKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRG 636
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+ ++E ++V +++ D+E + + KEG D V
Sbjct: 637 LFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAV 681
>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
Length = 447
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 169/361 (46%), Gaps = 26/361 (7%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
Q AL++F ++ PF P ++ LL +G+ A + F EM G+EP E Y
Sbjct: 75 QMSSALKLFREMQAGPFL-PTSASHNILLRGFFMAGR---AIEFFKEMKASGVEPDLESY 130
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDM 241
LL+A + + EA + M C PD+ TY+ L+ C +E ++L +++
Sbjct: 131 HILLSALSDSGRMAEAHALFSAM----TCSPDIMTYNVLMDGYCKIGQTYE-AQSLMKEI 185
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ PN T +I++ Y K ++ V M+ES C P+ T NT+++ F G
Sbjct: 186 LKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIES-NCVPNAVTFNTLIAGFCKAGM 244
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ---FPWTSST 358
++ + + + G T+N LI + KKR + + ++ KL+ T T
Sbjct: 245 LEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKR--GGVYTAVDLFNKLEGAGLTPTIVT 302
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN++I+ FS+ A MHAEG K D T+ CLI+G +A ++V + RL +
Sbjct: 303 YNSLIQGFSE--RANDGLRLLCHMHAEGCKPDVITYNCLISGLCSA---NRVEDAQRLFN 357
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MN 477
+ A NV+ +N +I + E + RM PD TF+ + A+ K G M+
Sbjct: 358 GMACAPNVTTFNFLIRGLCAQKKVEEARNILDRMTA----PDMTTFNTIILAFCKAGAMH 413
Query: 478 D 478
D
Sbjct: 414 D 414
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 149/347 (42%), Gaps = 20/347 (5%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
QAL++F E+L + P TY L+ K GQ A VF++M G+ P
Sbjct: 8 QALRLFKEVL--AGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNT 65
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
LL C + A +M+ P P +++ L++ A R IE +++M
Sbjct: 66 LLLGLCEIGQMSSALKLFREMQAGPF-LPTSASHNILLRGFFMAGR--AIE-FFKEMKAS 121
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
V P+ + +I+L +G + + S M TC PD+ T N ++ + GQ
Sbjct: 122 GVEPDLESYHILLSALSDSGRMAEAHALFSAM----TCSPDIMTYNVLMDGYCKIGQTYE 177
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ ++ G +P T++I+I Y K ++ V M + + T+N +I
Sbjct: 178 AQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIA 237
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ--- 421
F G + F +M G KA T+ LI+ V ++V L +KL+
Sbjct: 238 GFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKR--GGVYTAVDLFNKLEGAG 295
Query: 422 IAENVSFYNAVISA-CIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ + YN++I +A+D + R+ M + C+PD T++ +
Sbjct: 296 LTPTIVTYNSLIQGFSERANDGL---RLLCHMHAEGCKPDVITYNCL 339
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 115/257 (44%), Gaps = 15/257 (5%)
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
L++++ PN T N+++ G+ K G Q V S M +S+ P+ TMNT+L
Sbjct: 12 LFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDM-KSSGLLPNASTMNTLLLGL 70
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
GQ+ + + + + P + + NIL+ R + +E+ ++++
Sbjct: 71 CEIGQMSSALKLFREMQAGPFLPTSASHNILL------RGFFMAGRAIEFFKEMKASGVE 124
Query: 357 ---STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
+Y+ ++ A SD G F M D T+ L++GY G ++ S
Sbjct: 125 PDLESYHILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQSL 181
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
++ K NV Y+ +I+ K D + E V+ +M E +C P++ TF+ + + K
Sbjct: 182 MKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCK 241
Query: 474 EGMNDKVYAL--EQEKL 488
GM + L E EK+
Sbjct: 242 AGMLEDAIKLFAEMEKI 258
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 69/171 (40%), Gaps = 11/171 (6%)
Query: 153 LLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQ 212
L K G A +FN++ G+ PT Y +L+ + + ++ L M C+
Sbjct: 274 LCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERA--NDGLRLLCHMHA-EGCK 330
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
PDV TY+ LI A R E + L+ M + PN T N ++ G ++ +
Sbjct: 331 PDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFNFLIRGLCAQKKVEEARNI 387
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
L M PD+ T NTI+ F G + + G P T T
Sbjct: 388 LDRMT-----APDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYT 433
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 99/223 (44%), Gaps = 52/223 (23%)
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+ VL+G+ P+ T N ++ F GQ+ + ++ G+ P T N L+
Sbjct: 14 KEVLAGLF-----APNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLL 68
Query: 330 AYGKKRMYDKMSSVMEYMRKLQ---FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
+ +MSS ++ R++Q F TS+++N ++ F G A +E+ F++M A G
Sbjct: 69 GLCE---IGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRA--IEF-FKEMKASG 122
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
++ D +++ L++ +++G ++AE + ++A+
Sbjct: 123 VEPDLESYHILLSALSDSG---------------RMAEAHALFSAMT------------- 154
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
C PD T++++ + Y K G + +L +E L+
Sbjct: 155 ----------CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILK 187
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 15/190 (7%)
Query: 101 KAKAKAWVNTVAETFSDHVLKKQW--FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSG 158
K KA + T T D + KK+ + A+ +F L E P TY L+ G S
Sbjct: 257 KIGCKATIVTY-NTLIDSLCKKRGGVYTAVDLFNKL-EGAGLTPTIVTYNSLIQ--GFSE 312
Query: 159 QPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTY 218
+ ++ M EG +P Y L++ C + +++A N M C P+V T+
Sbjct: 313 RANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGMA----CAPNVTTF 368
Query: 219 STLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
+ LI+ + E +++ +R P+ T N ++ + KAG V+ ML+
Sbjct: 369 NFLIRGLCAQKKVEEA----RNILDRMTAPDMTTFNTIILAFCKAGAMHDAREVMKDMLK 424
Query: 279 SATCKPDVWT 288
P+ +T
Sbjct: 425 HGF-YPNTYT 433
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 167/362 (46%), Gaps = 5/362 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
++ QAL++F+ + + QP TY ++ L K G+ A + +M E G +P Y
Sbjct: 176 EFAQALELFDDMVARG-CQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTY 234
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
+ L+ + C++ L++EA + MK P V +Y++LI+ R++ + +M
Sbjct: 235 STLIDSLCKDRLVNEALDIFSYMKA-KGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMT 293
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
++ P+ VT ++++ + K G + + VL M E +P+V T N+++ ++ + +V
Sbjct: 294 SLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGV-EPNVITYNSLMHGYSLQMEV 352
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ ++ G P+ +++ILI Y + D+ + M + +Y +
Sbjct: 353 VEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTL 412
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I AF +G + F+ MH G D T+ L+ G+ G K R +
Sbjct: 413 IHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYL 472
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
N+ Y +I + K+ +L +++ + +PD + ++ + KEG+ D+ A
Sbjct: 473 KPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDE--A 530
Query: 483 LE 484
LE
Sbjct: 531 LE 532
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 132/306 (43%), Gaps = 1/306 (0%)
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
FN M+ P + LL+A R +A ++L++ L P+ T + LI
Sbjct: 78 FNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFC 137
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
+L ++ + + + P +T ++ G KAG F Q + M+ C+PDV
Sbjct: 138 LMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARG-CQPDV 196
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
+T TI++ G+ +K G P+ T++ LI + K R+ ++ + Y
Sbjct: 197 YTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSY 256
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M+ T +Y ++I+ K +M + + D TF LI+ + G
Sbjct: 257 MKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGN 316
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ ++ +++ + NV YN+++ +++E +++ M + C+PD ++SI
Sbjct: 317 VLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSI 376
Query: 467 MTEAYA 472
+ Y
Sbjct: 377 LINGYC 382
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 156/363 (42%), Gaps = 47/363 (12%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY L+ L K A +F+ M +GI PT YT+L+ C S EA
Sbjct: 228 QPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASA 287
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
LN+M +L N PD+ T+S LI C + E + + + M E V PN +T N ++ G
Sbjct: 288 MLNEMTSL-NIMPDIVTFSLLIDIFCKEGNVLE-AQGVLKTMTEMGVEPNVITYNSLMHG 345
Query: 260 YGKAGMFDQME----RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
Y QME R L ++ + CKPDV++ + +++ + ++D ++ + + +
Sbjct: 346 YSL-----QMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQ 400
Query: 316 GIDPETRTFNILIGAY---GKKR----MYDKM------------SSVME----------- 345
G+ P T ++ LI A+ GK R ++ M S ++E
Sbjct: 401 GLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKA 460
Query: 346 --YMRKLQFPWTSST---YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
R +Q + Y +I++ G+ H F ++ G++ D + + +ING
Sbjct: 461 FRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIING 520
Query: 401 YANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
GL + + + R + N YN +I ++ D ++ M++K D
Sbjct: 521 LCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580
Query: 461 SET 463
T
Sbjct: 581 EGT 583
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 151/347 (43%), Gaps = 45/347 (12%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP T+ L+ L K+G+ A ++F++MV G +P YT ++ C+ A
Sbjct: 158 QPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAG 217
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+ +M + CQPDV TYSTLI + C D + E ++ ++ M + ++P V+ ++ G
Sbjct: 218 LIKKMGEV-GCQPDVVTYSTLIDSLCKDRLVNEALD-IFSYMKAKGISPTVVSYTSLIQG 275
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ + +L+ M S PD+ T + ++ +F +G V + + G++P
Sbjct: 276 LCSFSRWKEASAMLNEM-TSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEP 334
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
T+N L+ Y S ME V+EA F
Sbjct: 335 NVITYNSLMHGY---------SLQME----------------VVEA----------RKLF 359
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL---QIAENVSFYNAVISAC 436
+ M G K D ++ LINGY + ++ + +L +++ + N Y +I A
Sbjct: 360 DVMITRGCKPDVFSYSILINGYC---MVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAF 416
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ L E ++K M PD T+S++ E + K+G K + L
Sbjct: 417 CQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRL 463
>gi|297826989|ref|XP_002881377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327216|gb|EFH57636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 589
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 180/393 (45%), Gaps = 26/393 (6%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
L K+W + V E + + +QP + L+ G+ + + A ++ +++E PT
Sbjct: 144 LNKKWDSIILVCEWILRRSSFQPDVICFNLLIDAYGQKFRFKEAESLYVQLLESRCVPTE 203
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM-RFELIETLY 238
+ YT L+ AYC LI++A L +M+ + P V Y+ I+ + E ++
Sbjct: 204 DTYTLLIKAYCMAGLIEKAEAVLIEMQN-HHVSPSVTVYNAYIEGLMKRKGNTEQAIDVF 262
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
Q M P T T N+++ YGKA M L + S CKP++ T +++ FA
Sbjct: 263 QRMKRDRCKPTTETYNLMINLYGKASK-SYMSWKLFCEMRSHQCKPNICTYTALVNAFAR 321
Query: 299 KGQVDMMERWYEKFR-----------------------NFGIDPETRTFNILIGAYGKKR 335
+G + E +E+ + + G +P+ ++NI++ AYG+
Sbjct: 322 EGLCEKAEEIFEQLQEDGHIDSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG 381
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
++ +V E M++L T ++ ++ A+S D E ++M G++ DT
Sbjct: 382 LHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSRARDVTKCEAIVKEMSENGVEPDTFVLN 441
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
++N Y G F K+ + ++S YN +I+ KA L +E ++ +KE+
Sbjct: 442 SMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKER 501
Query: 456 HCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
+ +PD T++ AY+++ + K + +E +
Sbjct: 502 NFKPDVVTWTSRIGAYSRKKLYVKCLEIFEEMI 534
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 3/174 (1%)
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
VFE +K P ++M LL ++ + EM E G+EP + ++L Y
Sbjct: 389 VFEEMKRLGI-APTMKSHMLLLSAYSRARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLY 447
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
R + L +M+ P C D+ TY+ LI A E IE L+ ++ ER+ P+
Sbjct: 448 GRLGQFTKMEKILAEMENGP-CTADISTYNILINIYGKAGFLERIEELFVELKERNFKPD 506
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
VT +G Y + ++ + + M++S C PD T +LS +++ QV+
Sbjct: 507 VVTWTSRIGAYSRKKLYVKCLEIFEEMIDSG-CAPDGGTAKVLLSACSSEDQVE 559
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 5/116 (4%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ + GK+G E ++F E+ E +P +T+ + AY R L + +M
Sbjct: 474 TYNILINIYGKAGFLERIEELFVELKERNFKPDVVTWTSRIGAYSRKKLYVKCLEIFEEM 533
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFE----LIETLYQDMDERSVTPNTVTQNIVL 257
C PD T L+ AC + E ++ T+++ + S+ PN + +++ +
Sbjct: 534 ID-SGCAPDGGTAKVLLSACSSEDQVEQVTSVLRTMHKGVSVSSLVPNLMAKSLTV 588
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 196/465 (42%), Gaps = 20/465 (4%)
Query: 33 RAQVPNFNLIHCSVTSTNKHTSFSSESAVAAKKRLWKEGEYPGVS--ETSIPGYRSKRTP 90
R +P+ +I C+ + + A + L G P V I GY K
Sbjct: 139 RGDIPD--IIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGY-CKTGE 195
Query: 91 IKNLKKKLERKAKAKAWV--NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYM 148
I + + L+R + + V NT+ T D + +A++V + ++ Y P TY
Sbjct: 196 IGSALQLLDRMSVSPDVVTYNTILRTLCD---SGKLKEAMEVLDRQMQRECY-PDVITYT 251
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
L+ K A K+ +EM ++G +P Y L+ C+ +DEA LN M +
Sbjct: 252 ILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSY 311
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
CQP+V T++ ++++ R+ E +M + +P+ VT NI++ + G+ +
Sbjct: 312 -GCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGR 370
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
VL M + C P+ + N +L +++ + + + G P+ T+N L+
Sbjct: 371 AIDVLEKMPQHG-CTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLL 429
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
A K D ++ + TYN VI+ S +G ++M +G+K
Sbjct: 430 TALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLK 489
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
D T+ L+ G + G + I+ ++ + N YN+++ KA +
Sbjct: 490 PDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDF 549
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
M + C+P ++ I+ E A EG L +E L++L E
Sbjct: 550 LAYMVARGCKPTETSYMILIEGLAYEG-------LAKEALELLNE 587
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 120/267 (44%), Gaps = 7/267 (2%)
Query: 123 QWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
+W A + EM+++ P T+ L+ L + G A V +M + G P
Sbjct: 332 RWMDAEKFLAEMIRKG--CSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLS 389
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQD 240
Y LL A C++ ++ A L+ M + C PD+ TY+TL+ A C D +E L Q
Sbjct: 390 YNPLLHALCKDKKMERAIEYLDIMVS-RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ- 447
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
+ + +P +T N V+ G K G D ++L M + KPD+ T +T++ + +G
Sbjct: 448 LGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEM-KGKGLKPDIITYSTLVGGLSREG 506
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+VD ++ G+ P T+N ++ K R + + YM T ++Y
Sbjct: 507 KVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYM 566
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGM 387
+IE + G AK ++ + G+
Sbjct: 567 ILIEGLAYEGLAKEALELLNELCSRGV 593
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 121/319 (37%), Gaps = 32/319 (10%)
Query: 191 RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT 250
RN ++E F L M + PD+ ++LI+ + + + +++ P+
Sbjct: 122 RNGELEEGFKFLEDMVCRGDI-PDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDV 180
Query: 251 VTQNIVLGGYGKAG-------MFDQME------------RVL--SGMLESAT-------- 281
+T N+++ GY K G + D+M R L SG L+ A
Sbjct: 181 ITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQ 240
Query: 282 --CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
C PDV T ++ + V + ++ R+ G P+ T+N+LI K+ D+
Sbjct: 241 RECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDE 300
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+ +M T+N ++ + G E +M +G TF LIN
Sbjct: 301 AIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILIN 360
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
GL + I + + N YN ++ A K + M + C P
Sbjct: 361 FLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYP 420
Query: 460 DSETFSIMTEAYAKEGMND 478
D T++ + A K+G D
Sbjct: 421 DIVTYNTLLTALCKDGKVD 439
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 78/207 (37%), Gaps = 43/207 (20%)
Query: 277 LESATCK---PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
LE C+ PD+ +++ G+ R E + G P+ T+N+LI Y K
Sbjct: 133 LEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCK 192
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKH-MEYTFEQMHAEGMKADTK 392
++ S ++ + ++ TYN ++ D G K ME QM E
Sbjct: 193 T---GEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRE------- 242
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
+ VI+ Y +I A K + + ++ M
Sbjct: 243 -------------CYPDVIT----------------YTILIEATCKESGVGQAMKLLDEM 273
Query: 453 KEKHCRPDSETFSIMTEAYAKEGMNDK 479
++K C+PD T++++ KEG D+
Sbjct: 274 RDKGCKPDVVTYNVLINGICKEGRLDE 300
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 163/346 (47%), Gaps = 2/346 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY ++ L K G +LA + +M + IEP +Y ++ A C +++A
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALN 277
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M +P+V TY++LI+ + R+ L DM ER + PN VT + ++ +
Sbjct: 278 LFTEMDN-KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + E++ M++ + PD++T +++++ F ++D + +E + P
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+N LI + K + D+ + M + + TY +I F + + + F+
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFK 455
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
QM ++G+ D T+ L++G N G + + ++ ++ YN +I KA
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG 515
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ + ++ + K +P+ T++ M + ++G+ ++ AL +E
Sbjct: 516 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFRE 561
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 146/341 (42%), Gaps = 12/341 (3%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ + Q LA V +M++ G EP +LL +C + I +A + QM
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ QPD +T++TLI R L M + P+ VT IV+ G K G
Sbjct: 178 VEM-GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D +L M E +P V NTI+ N V+ + + N GI P T+N
Sbjct: 237 IDLALSLLKKM-EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
LI + S ++ M + + T++ +I+AF G E +++M
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE----NVSFYNAVISACIKADD 441
+ D T+ LING+ H + + +L I++ NV YN +I KA
Sbjct: 356 SIDPDIFTYSSLINGFC----MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAY--AKEGMNDKV 480
+ E +++ M ++ ++ T++ + + A+E N ++
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQI 452
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 112/245 (45%), Gaps = 7/245 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A +FE++ + + P TY L+ K+ + + ++F EM + G+ YT L
Sbjct: 379 EAKHMFELMISKDCF-PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + + D A + QM + PD+ TYS L+ + + E +++ +
Sbjct: 438 IHGFFQARECDNAQIVFKQMVS-DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+ T NI++ G KAG + + L KP+V T T++S F KG +
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCS-LSLKGVKPNVVTYTTMMSGFCRKGLKEEA 555
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS--VMEYMRKLQFPWTSSTYNNVI 363
+ + + + G P++ T+N LI A+ R DK +S ++ MR +F +ST V
Sbjct: 556 DALFREMKEEGPLPDSGTYNTLIRAH--LRDGDKAASAELIREMRSCRFVGDASTIGLVT 613
Query: 364 EAFSD 368
D
Sbjct: 614 NMLHD 618
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 117/267 (43%), Gaps = 9/267 (3%)
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
P + +S L+ A +F+L+ +L + M ++ N T +I++ + + V
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI-GAY 331
L+ M++ +PD+ T+N++L+ F + ++ + G P++ TFN LI G +
Sbjct: 139 LAKMMKLGY-EPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLF 197
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
R + ++ V + K P TY V+ GD ++M ++
Sbjct: 198 RHNRASEAVALVDRMVVKGCQP-DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGV 256
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDLMEMERV 448
+ +I+ N + V ++ L +++ I NV YN++I + R+
Sbjct: 257 VIYNTIIDALCN---YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEG 475
M E+ P+ TFS + +A+ KEG
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEG 340
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/260 (18%), Positives = 106/260 (40%), Gaps = 1/260 (0%)
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
Y Y + ++ ++ + L+ DM + P+ V + +L K FD + L
Sbjct: 47 YDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVIS-LGE 105
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
+++ +++T + +++ F + Q+ + K G +P+ T N L+ +
Sbjct: 106 QMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGN 165
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
S++ M ++ + S T+N +I A ++M +G + D T+
Sbjct: 166 RISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYG 225
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
++NG G +S ++ + +I V YN +I A ++ + ++ M K
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 456 HCRPDSETFSIMTEAYAKEG 475
RP+ T++ + G
Sbjct: 286 GIRPNVVTYNSLIRCLCNYG 305
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 4/175 (2%)
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P F+ L+ A K +D + S+ E M+ L TY+ +I F
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
+M G + D T L+NG+ + +S V ++ + +N +I +
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL----EQEKLQ 489
+ E + RM K C+PD T+ I+ K G D +L EQ K++
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIE 253
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 147/331 (44%), Gaps = 8/331 (2%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEE-GIEPTPELYTALLAAYCRNSLIDEAFVTLNQ 204
TY L+ +G+ + A + EM ++ G+ PTP +Y + A C++ + EA +
Sbjct: 20 TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79
Query: 205 MKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG 264
MK C+PDV T++TLI A R + + + +M+ N VT N ++ G AG
Sbjct: 80 MKD-GACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAG 138
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRN-FGIDPETRT 323
+ V+ GM T PD T N I+ F G++D + E+ + G P+T T
Sbjct: 139 RSGEAVLVMQGM----TTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFT 194
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST-YNNVIEAFSDMGDAKHMEYTFEQM 382
++ILI K K +++ M + S +N +++ + D M
Sbjct: 195 YSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSM 254
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
G D T+ +I+G G K + + +V Y +++ KA +
Sbjct: 255 LEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKM 314
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+E R+ KRM E C P++ T+S++ + K
Sbjct: 315 VEACRLVKRMLEDGCTPNAVTYSLVFDGLCK 345
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 116/273 (42%), Gaps = 7/273 (2%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDER-SVTPNTVTQNIVLGGYGKAGMFDQMERV 272
D YTY L++A A + L ++M+++ + P N + K+G + V
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
+ M + A CKPDV T NT+++ G++D ++ ++ G T+N LI
Sbjct: 77 VKNMKDGA-CKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLS 135
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM-HAEGMKADT 391
+ VM+ M P T TYN +I F G+ E+M G DT
Sbjct: 136 SAGRSGEAVLVMQGMTTT--PDTQ-TYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDT 192
Query: 392 KTFCCLINGYANAGLFHKVISSVR-LASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
T+ LING + K ++ + + +V +N ++ KA DL +
Sbjct: 193 FTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLS 252
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
M E C PD T+S + + + G DK +AL
Sbjct: 253 SMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFAL 285
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
K+ + AR++ + M+E G P Y+ ++ CR +D+ F L +M + C+PDV
Sbjct: 240 KAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVS-RGCKPDV 298
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
TY+ L+ A + L + M E TPN VT ++V G K D +L+
Sbjct: 299 VTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTS 358
Query: 276 M 276
+
Sbjct: 359 I 359
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 10/177 (5%)
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G+ P +N + A K + V++ M+ T+N +I G
Sbjct: 49 GMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEA 108
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
+ ++M G A+ T+ LING ++AG + +V + + + YNA+I
Sbjct: 109 QQVLDEMERSGFAANLVTYNTLINGLSSAG---RSGEAVLVMQGMTTTPDTQTYNAIIHG 165
Query: 436 CIKADDLMEMERVY---KRMKEK-HCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
K+ E++R Y + MK++ C PD+ T+SI+ K K L QE +
Sbjct: 166 FCKSG---EIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMI 219
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 70/171 (40%), Gaps = 10/171 (5%)
Query: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKL-QFPW---TSSTYNNVIEAFSDMGDAKHMEYT 378
T+ +L+ A+ + ++ + M+ +R++ Q P T S YN + A G
Sbjct: 20 TYFVLVRAHC---LAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
+ M K D TF LI G AG + + + A N+ YN +I+
Sbjct: 77 VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
A E V + M PD++T++ + + K G D+ Y +E Q
Sbjct: 137 AGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQ 184
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 154/338 (45%), Gaps = 7/338 (2%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY ++ L K G+P+LA + N+M + IE +Y ++ C+ +D+AF
Sbjct: 212 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFD 271
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
N+M+T +PDV+TY+ LI + R+ L DM E+++ P+ V N ++ +
Sbjct: 272 LFNKMET-KGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAF 330
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + E++ M++S C PDV NT++ F +V+ + + G+
Sbjct: 331 VKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T T+ LI + + R D V + M TYN +++ + G+ + FE
Sbjct: 391 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFE 450
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACI 437
M MK D T+ +I AG KV L L + NV Y ++S
Sbjct: 451 YMQKRDMKLDIVTYTTMIEALCKAG---KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ E + ++ MKE P+S T++ + A ++G
Sbjct: 508 RKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDG 545
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 152/348 (43%), Gaps = 3/348 (0%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
YQP T+ L+ L + + A + MV +G +P Y A++ C+ D A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
LN+M+ + DV Y+T+I + L+ M+ + + P+ T N ++
Sbjct: 236 NLLNKMEK-GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY-EKFRNFGID 318
G + R+LS MLE PD+ N ++ F +G++ E+ Y E ++
Sbjct: 295 LCNYGRWSDASRLLSDMLEK-NINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF 353
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P+ +N LI + K + ++ V M + + TY +I F D + +
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
F+QM ++G+ D T+ L++G N G + K + ++ Y +I A K
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
A + + ++ + K +P+ T++ M + ++G+ ++ AL E
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVE 521
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 171/417 (41%), Gaps = 44/417 (10%)
Query: 57 SESAVAAKKRLWKEGEYPGVSE--TSIPGYRSKRTP--IKNLKKKLERKAKAKAWVNTVA 112
+ AVA +R+ +G P + I G + P NL K+E K K +A V +
Sbjct: 196 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME-KGKIEADV-VIY 253
Query: 113 ETFSDHVLK-KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMV 171
T D + K K A +F ++ + +P TY L+ L G+ A ++ ++M+
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETKGI-KPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 172 EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRF 231
E+ I P + AL+ A+ + + EA ++M +C PDV Y+TLIK R
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 232 ELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNT 291
E ++++M +R + NTVT ++ G+ +A D + V M+ PD+ T N
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV-HPDIMTYNI 431
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
+L N G V ET V EYM+K
Sbjct: 432 LLDGLCNNGNV-----------------ETALV------------------VFEYMQKRD 456
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
TY +IEA G + F + +G+K + T+ +++G+ GL +
Sbjct: 457 MKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 516
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ + N YN +I A ++ D + K M+ D+ TF ++T
Sbjct: 517 ALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVT 573
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/239 (18%), Positives = 97/239 (40%), Gaps = 1/239 (0%)
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
L+ DM + P+ V + +L K FD + L +++ +++T + ++ F
Sbjct: 62 LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVIS-LGEQMQNLGISHNLYTYSIFINYF 120
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
+ Q+ + K G P T N L+ + + ++++ M ++ + +
Sbjct: 121 CRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 180
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
T+ ++ A E+M +G + D T+ +ING G ++ +
Sbjct: 181 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK 240
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
K +I +V YN +I K + + ++ +M+ K +PD T++ + G
Sbjct: 241 MEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYG 299
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 73/195 (37%), Gaps = 35/195 (17%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P + + +LS A + D++ E+ +N GI T++I I + ++ ++
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ M KL + + T N+++ F +QM G + DT TF L++G
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG--- 189
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
LF +S +A + +RM K C+PD T
Sbjct: 190 --LFQHNKASEAVA------------------------------LVERMVVKGCQPDLVT 217
Query: 464 FSIMTEAYAKEGMND 478
+ + K G D
Sbjct: 218 YGAVINGLCKRGEPD 232
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 147/331 (44%), Gaps = 8/331 (2%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEE-GIEPTPELYTALLAAYCRNSLIDEAFVTLNQ 204
TY L+ +G+ + A + EM ++ G+ PTP +Y + A C++ + EA +
Sbjct: 20 TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79
Query: 205 MKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG 264
MK C+PDV T++TLI A R + + + +M+ N VT N ++ G AG
Sbjct: 80 MKD-GACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAG 138
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRN-FGIDPETRT 323
+ V+ GM T PD T N I+ F G++D + E+ + G P+T T
Sbjct: 139 RSGEAVLVMQGM----TTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFT 194
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST-YNNVIEAFSDMGDAKHMEYTFEQM 382
++ILI K K +++ M + S +N +++ + D M
Sbjct: 195 YSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSM 254
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
G D T+ +I+G G K + + +V Y +++ KA +
Sbjct: 255 LEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKM 314
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+E R+ KRM E C P++ T+S++ + K
Sbjct: 315 VEACRLVKRMLEDGCTPNAVTYSLVFDGLCK 345
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 116/273 (42%), Gaps = 7/273 (2%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDER-SVTPNTVTQNIVLGGYGKAGMFDQMERV 272
D YTY L++A A + L ++M+++ + P N + K+G + V
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
+ M + A CKPDV T NT+++ G++D ++ ++ G T+N LI
Sbjct: 77 VKNMKDGA-CKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLS 135
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM-HAEGMKADT 391
+ VM+ M P T TYN +I F G+ E+M G DT
Sbjct: 136 SAGRSGEAVLVMQGMTTT--PDTQ-TYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDT 192
Query: 392 KTFCCLINGYANAGLFHKVISSVR-LASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
T+ LING + K ++ + + +V +N ++ KA DL +
Sbjct: 193 FTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLS 252
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
M E C PD T+S + + + G DK +AL
Sbjct: 253 SMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFAL 285
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
K+ + AR++ + M+E G P Y+ ++ CR +D+ F L +M + C+PDV
Sbjct: 240 KAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVS-RGCKPDV 298
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
TY+ L+ A + L + M E TPN VT ++V G K D +L+
Sbjct: 299 VTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTS 358
Query: 276 MLESATCKPDVWTMNTIL 293
+ + DV T+L
Sbjct: 359 IRDKGR-VTDVVAFETLL 375
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 10/177 (5%)
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G+ P +N + A K + V++ M+ T+N +I G
Sbjct: 49 GMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEA 108
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
+ ++M G A+ T+ LING ++AG + +V + + + YNA+I
Sbjct: 109 QQVLDEMERSGFAANLVTYNTLINGLSSAG---RSGEAVLVMQGMTTTPDTQTYNAIIHG 165
Query: 436 CIKADDLMEMERVY---KRMKEK-HCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
K+ E++R Y + MK++ C PD+ T+SI+ K K L QE +
Sbjct: 166 FCKSG---EIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMI 219
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 70/171 (40%), Gaps = 10/171 (5%)
Query: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKL-QFPW---TSSTYNNVIEAFSDMGDAKHMEYT 378
T+ +L+ A+ + ++ + M+ +R++ Q P T S YN + A G
Sbjct: 20 TYFVLVRAHC---LAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
+ M K D TF LI G AG + + + A N+ YN +I+
Sbjct: 77 VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
A E V + M PD++T++ + + K G D+ Y +E Q
Sbjct: 137 AGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQ 184
>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
Length = 547
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 166/391 (42%), Gaps = 46/391 (11%)
Query: 127 ALQVFEMLKEQPF-YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE-GIEPTPELYTA 184
AL++F L P P E +Y+ ++ L +SG+ A K+F++M+++ G P ++
Sbjct: 90 ALRIFSALHSPPLSVPPSEQSYIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFS- 148
Query: 185 LLAAYCRNS-LIDEAFVTLNQMKTLPNC-------------------------------- 211
+A C N+ L+D A L + L C
Sbjct: 149 FVAGSCTNAGLLDAASTLLTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQD 208
Query: 212 ---QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
PDV++++ +IK F+ L + M E +P+T+T NI++ G +A ++
Sbjct: 209 GLYSPDVWSFNVVIKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNK 268
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
VL + C P+ T +++S + G+++ Y G P T T+N+LI
Sbjct: 269 GHEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLI 328
Query: 329 GAYGKKRMYDKMSSVMEYMRKL---QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
YGK M S + R+L P T++++I+ + G + +++M
Sbjct: 329 NGYGKAL---DMESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLH 385
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVR-LASKLQIAENVSFYNAVISACIKADDLME 444
++ + TF +I+ + + +R L + IA YN VI K + E
Sbjct: 386 HIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMRTDIAPQTFIYNPVIDILCKGGKVDE 445
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ MKEK C PD T++I+ + +G
Sbjct: 446 ANLIVTDMKEKGCHPDKYTYTILIIGHCMKG 476
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 161/376 (42%), Gaps = 52/376 (13%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A+ +FE + Y P ++ ++ + + G + A ++ M E G P + L+
Sbjct: 198 AVALFESWIQDGLYSPDVWSFNVVIKGVCRMGNFQKALELVERMTEFGCSPDTITHNILV 257
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
CR +++ L +++ C P+ TY+++I A + E ++Y DM E
Sbjct: 258 DGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGT 317
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PNTVT N+++ GYGKA + R+ ++ C PDV T ++++ + GQ+D +
Sbjct: 318 RPNTVTYNVLINGYGKALDMESAVRMYRQLILR-HCPPDVVTFSSLIDGYCRCGQLDDAK 376
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF-----PWTSSTYNN 361
R +++ I P TF+I+I + K+ ++ + ++ +R+L P T YN
Sbjct: 377 RIWKEMGLHHIQPNVYTFSIIIHSLCKQ---NRSAEALDILRELNMRTDIAPQT-FIYNP 432
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
VI+ G M +G D T+ LI G+ G +
Sbjct: 433 VIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKG---------------R 477
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
I E ++ ++ +M E CRPD+ T + K GM ++V
Sbjct: 478 IPEAITLFH--------------------KMVEAGCRPDNITVNSFVSCVLKAGMPNEVD 517
Query: 482 ALEQEKLQMLLEASGH 497
Q++L ASGH
Sbjct: 518 -------QIMLIASGH 526
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 1/213 (0%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
KQ + +V L+ P TY ++ K+G+ E A V+N+M+E G P
Sbjct: 264 KQVNKGHEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVT 323
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y L+ Y + +L E+ V + + L +C PDV T+S+LI + + + ++++M
Sbjct: 324 YNVLINGYGK-ALDMESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEM 382
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ PN T +I++ K + +L + P + N ++ + G+
Sbjct: 383 GLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMRTDIAPQTFIYNPVIDILCKGGK 442
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
VD + G P+ T+ ILI + K
Sbjct: 443 VDEANLIVTDMKEKGCHPDKYTYTILIIGHCMK 475
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 109/250 (43%), Gaps = 4/250 (1%)
Query: 96 KKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLG 155
++L+R T S + + A+ V+ + E +P TY L+ G
Sbjct: 274 RRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESG-TRPNTVTYNVLINGYG 332
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
K+ E A +++ +++ P +++L+ YCR +D+A +M L + QP+V
Sbjct: 333 KALDMESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMG-LHHIQPNV 391
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERS-VTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
YT+S +I + R + ++++ R+ + P T N V+ K G D+ +++
Sbjct: 392 YTFSIIIHSLCKQNRSAEALDILRELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVT 451
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
M E C PD +T ++ KG++ + K G P+ T N + K
Sbjct: 452 DMKEKG-CHPDKYTYTILIIGHCMKGRIPEAITLFHKMVEAGCRPDNITVNSFVSCVLKA 510
Query: 335 RMYDKMSSVM 344
M +++ +M
Sbjct: 511 GMPNEVDQIM 520
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/189 (18%), Positives = 80/189 (42%), Gaps = 2/189 (1%)
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
D ++ + + G PE F+ + G+ + D S+++ +L YN +
Sbjct: 126 DALKLFDQMMDQSGYLPEAGFFSFVAGSCTNAGLLDAASTLLTKGSRLGCCIEPYAYNYL 185
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGM-KADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+ + G A+ FE +G+ D +F +I G G F K + V ++
Sbjct: 186 LNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRMGNFQKALELVERMTEFG 245
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRM-KEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+ + +N ++ +A + + V +R+ ++ C P++ T++ + Y K G +
Sbjct: 246 CSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMEDA 305
Query: 481 YALEQEKLQ 489
++ + L+
Sbjct: 306 MSVYNDMLE 314
>gi|168005568|ref|XP_001755482.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693189|gb|EDQ79542.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 765
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 173/394 (43%), Gaps = 30/394 (7%)
Query: 108 VNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
+N+V F+ KQW A VFE +KE P TY +LGKSGQ A +VF
Sbjct: 191 LNSVLRRFAKM---KQWRDACAVFEYMKENNKLSPP--TYTSYFSVLGKSGQSRKAIRVF 245
Query: 168 NEM-VEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
NE+ ++ + + ++L+ N ID+AF Q+K QPD TYST+I C
Sbjct: 246 NELPLDSEVRKNVFVCNSILSTMIYNGKIDKAFRLFEQLKK-EGLQPDTVTYSTVIAGCA 304
Query: 227 DAMR-FELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
+ L +D+ +T + V ++ G+ + + M + A P+
Sbjct: 305 KTRDGYSKALALIEDIKASGLTQDAVIYGAMMNVCASQGLDREAQATFQEMCD-AGFTPN 363
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
++ +++L+ +A++G+ ER E R G+ P +N L+ AY +M K V +
Sbjct: 364 LFHYSSLLNAYASRGKYQQAERVLEAIRAAGLTPNLVVYNSLMNAYANCQMPSKAREVFD 423
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA--------DTKTFCC- 396
+ ++ ++++A++ K + TF+ M A+GMK D C
Sbjct: 424 RIEAEGLQRDMVSFCSMMDAYAKSDMLKEAQETFDSMIAQGMKPVYMLMQLLDLSGSLCS 483
Query: 397 -----------LINGYANAGLFHKVISSVRLASKLQIAE-NVSFYNAVISACIKADDLME 444
LI+ YA G V+ V K Q E ++ +N ++ A +
Sbjct: 484 YGWWGSVGYSILISAYAKLGEMDGVLKLVDQIEKGQNGECDILLFNTLLKVYCNAGYMDG 543
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ V K+M + C D TF+I+ +AKE + D
Sbjct: 544 VTAVLKKMDAEGCGSDRGTFNILIGYFAKEDLGD 577
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/355 (19%), Positives = 141/355 (39%), Gaps = 17/355 (4%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+ ++ QA +V E ++ P Y L+ P AR+VF+ + EG++
Sbjct: 377 RGKYQQAERVLEAIRAAGL-TPNLVVYNSLMNAYANCQMPSKAREVFDRIEAEGLQRDMV 435
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
+ +++ AY ++ ++ EA T + M + VY L+ +
Sbjct: 436 SFCSMMDAYAKSDMLKEAQETFDSM--IAQGMKPVYMLMQLLDLSGSLCSYGWW------ 487
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
+V +I++ Y K G D + +++ + + + D+ NT+L V+ N G
Sbjct: 488 --------GSVGYSILISAYAKLGEMDGVLKLVDQIEKGQNGECDILLFNTLLKVYCNAG 539
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+D + +K G + TFNILIG + K+ + D +E M +TYN
Sbjct: 540 YMDGVTAVLKKMDAEGCGSDRGTFNILIGYFAKEDLGDLALKTLEDMETRGHRPNEATYN 599
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+ + + G + M E M G+ + ++ G V++
Sbjct: 600 ALFQGYVKNGKMEEMFEALEAMKQRGITPTNLSLQTIMLGCIEHNRIDVVLAYFPYLKAT 659
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
IA + S ++ A ++ + ++ M+ +P +T+ ++ + Y G
Sbjct: 660 GIALSYSVMERLVEALVETGQMDVVKDALHLMQTTGQQPSQKTWDLVLQKYVSLG 714
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/302 (19%), Positives = 130/302 (43%), Gaps = 24/302 (7%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL---- 181
+A +VF+ ++ + Q ++ ++ KS + A++ F+ M+ +G++P L
Sbjct: 417 KAREVFDRIEAEGL-QRDMVSFCSMMDAYAKSDMLKEAQETFDSMIAQGMKPVYMLMQLL 475
Query: 182 ----------------YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC 225
Y+ L++AY + +D ++Q++ N + D+ ++TL+K
Sbjct: 476 DLSGSLCSYGWWGSVGYSILISAYAKLGEMDGVLKLVDQIEKGQNGECDILLFNTLLKVY 535
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
+A + + + + MD + T NI++G + K + D + L M E+ +P+
Sbjct: 536 CNAGYMDGVTAVLKKMDAEGCGSDRGTFNILIGYFAKEDLGDLALKTLEDM-ETRGHRPN 594
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN-ILIGAYGKKRMYDKMSSVM 344
T N + + G+++ M E + GI P + I++G R+ D + +
Sbjct: 595 EATYNALFQGYVKNGKMEEMFEALEAMKQRGITPTNLSLQTIMLGCIEHNRI-DVVLAYF 653
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
Y++ + S ++EA + G ++ M G + KT+ ++ Y +
Sbjct: 654 PYLKATGIALSYSVMERLVEALVETGQMDVVKDALHLMQTTGQQPSQKTWDLVLQKYVSL 713
Query: 405 GL 406
G
Sbjct: 714 GE 715
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 93/233 (39%), Gaps = 38/233 (16%)
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
GK+G + RV + + + + +V+ N+ILS G++D R +E+ + G+ P+
Sbjct: 233 GKSGQSRKAIRVFNELPLDSEVRKNVFVCNSILSTMIYNGKIDKAFRLFEQLKKEGLQPD 292
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T T++ +I K R D S + + E
Sbjct: 293 TVTYSTVIAGCAKTR--DGYSKALALI--------------------------------E 318
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+ A G+ D + ++N A+ GL + ++ + N+ Y+++++A
Sbjct: 319 DIKASGLTQDAVIYGAMMNVCASQGLDREAQATFQEMCDAGFTPNLFHYSSLLNAYASRG 378
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA----LEQEKLQ 489
+ ERV + ++ P+ ++ + AYA M K +E E LQ
Sbjct: 379 KYQQAERVLEAIRAAGLTPNLVVYNSLMNAYANCQMPSKAREVFDRIEAEGLQ 431
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 165/364 (45%), Gaps = 5/364 (1%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A ++F+ + Q P ++ L+ LL K+G + A K F +M G+ P +YT L+
Sbjct: 482 AERIFDEMPSQGVV-PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILI 540
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERS 245
+CRN ++ EA ++M C DV TY+T++ C + M E E L+ +M ER
Sbjct: 541 GGFCRNGVMSEALKVRDEMLE-QGCXLDVVTYNTILNGLCKEKMLSEADE-LFTEMTERG 598
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
V P+ T ++ GY K G ++ + M++ KPDV T NT++ F +++ +
Sbjct: 599 VFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQR-NLKPDVVTYNTLIDGFCKGSEMEKV 657
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ + I P ++ ILI Y + + + M + F T T N +++
Sbjct: 658 NELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 717
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ G+A + M +G+ D T+ LING+ + + V + +
Sbjct: 718 YCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPD 777
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
V YN +++ + + E E + +M E+ PD T++ + + + + + +
Sbjct: 778 VITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHD 837
Query: 486 EKLQ 489
E LQ
Sbjct: 838 EMLQ 841
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 155/342 (45%), Gaps = 2/342 (0%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L K+ + E + ++M E+G+ P Y L+ AYCR L++EAF ++ M +P
Sbjct: 368 LCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSG-KGLKP 426
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
V+TY+ +I ++ + + +M + ++P+T T NI+L + ER+
Sbjct: 427 CVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIF 486
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
M S PD+ + + ++ + + G +D +++ +N G+ P+ + ILIG + +
Sbjct: 487 DEM-PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCR 545
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+ + V + M + TYN ++ + F +M G+ D T
Sbjct: 546 NGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYT 605
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
F LINGY G +K ++ + + + +V YN +I K ++ ++ ++ M
Sbjct: 606 FTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMI 665
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
+ P+ ++ I+ Y G + + L E ++ EA+
Sbjct: 666 SRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEAT 707
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 160/352 (45%), Gaps = 20/352 (5%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY ++ L K+G+ A+ V +EM++ G+ P Y LL CRN + +A
Sbjct: 425 KPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAER 484
Query: 201 TLNQMKTLPNCQPDVYTYSTLI-----KACVD-AMRFELIETLYQDMDERSVTPNTVTQN 254
++M + PD+ ++S LI C+D A+++ ++DM + P+ V
Sbjct: 485 IFDEMPS-QGVVPDLVSFSALIGLLSKNGCLDQALKY------FRDMKNAGLAPDNVIYT 537
Query: 255 IVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRN 314
I++GG+ + G+ + +V MLE C DV T NTIL+ + + + + +
Sbjct: 538 ILIGGFCRNGVMSEALKVRDEMLEQG-CXLDVVTYNTILNGLCKEKMLSEADELFTEMTE 596
Query: 315 FGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKH 374
G+ P+ TF LI Y K +K ++ E M + TYN +I+ F + +
Sbjct: 597 RGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEK 656
Query: 375 MEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL---QIAENVSFYNA 431
+ + M + + + ++ LINGY N G V + RL ++ + N
Sbjct: 657 VNELWNDMISRRIYPNHISYGILINGYCNMGC---VSEAFRLWDEMVEKGFEATIITCNT 713
Query: 432 VISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
++ +A + ++ + M K PD T++ + + KE D+ +AL
Sbjct: 714 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFAL 765
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 140/330 (42%), Gaps = 16/330 (4%)
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
F + +G+ + +LL + +D A+ + Q Q +VYT + +I A
Sbjct: 311 FRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW-EIYQEVVRSGVQVNVYTLNIMINALC 369
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
+ E ++ DM+E+ V P+ VT N ++ Y + G+ ++ ++ M KP V
Sbjct: 370 KNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSM-SGKGLKPCV 428
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI-------GAYGKKRMYDK 339
+T N I++ G+ + ++ G+ P+T T+NIL+ +R++D+
Sbjct: 429 FTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDE 488
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
M S + P S ++ +I S G F M G+ D + LI
Sbjct: 489 MPS------QGVVPDLVS-FSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIG 541
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
G+ G+ + + + +V YN +++ K L E + ++ M E+ P
Sbjct: 542 GFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFP 601
Query: 460 DSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
D TF+ + Y K+G +K L + +Q
Sbjct: 602 DFYTFTTLINGYXKDGNMNKAVTLFEMMIQ 631
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 115/281 (40%), Gaps = 35/281 (12%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY +L L K A ++F EM E G+ P +T L+ Y ++ +++A VTL +M
Sbjct: 570 TYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKA-VTLFEM 628
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
N +PDV TY+TLI E + L+ DM R + PN ++ I++ GY G
Sbjct: 629 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 688
Query: 266 FDQMERVLSGMLESA------TCK----------------------------PDVWTMNT 291
+ R+ M+E TC PD T NT
Sbjct: 689 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 748
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
+++ F + +D K N G+ P+ T+N+++ + ++ + +M M +
Sbjct: 749 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 808
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
STY ++I + K ++M G D K
Sbjct: 809 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 849
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 165/362 (45%), Gaps = 5/362 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
++ QA+++F+ + + QP TY ++ L K G+ A + +M E G +P Y
Sbjct: 178 EFAQAVELFDDMVAKG-CQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTY 236
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
+ L+ + CR+ L++EA + MK PD++TY++LI+ R++ L +M
Sbjct: 237 STLIDSLCRDRLVNEALDIFSYMKA-KGISPDIFTYTSLIQGLCKFSRWKEASALLNEMT 295
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
++ P+ VT N+++ + K G + VL M E +P+V T ++++ ++ V
Sbjct: 296 SLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGV-EPNVVTYSSLMYGYSLWTDV 354
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ + G P ++NILI Y K + D+ + M + +YN +
Sbjct: 355 VEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTL 414
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I F +G + + F M G D T+ L++G+ G K R +
Sbjct: 415 IHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYL 474
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
N+ Y ++ A K+ + + +++ + + +P + ++ + KEG+ D+ A
Sbjct: 475 KPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDE--A 532
Query: 483 LE 484
LE
Sbjct: 533 LE 534
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 138/323 (42%), Gaps = 1/323 (0%)
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
FN M+ P + LL+A + + ++L++ L P++YT S +
Sbjct: 80 FNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFC 139
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
R +L ++ + + + P VT ++ G K G F Q + M+ C+PDV
Sbjct: 140 QLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKG-CQPDV 198
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
+T NTI++ G+ +K G P T++ LI + + R+ ++ + Y
Sbjct: 199 YTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSY 258
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M+ TY ++I+ K +M + + D TF L++ + G
Sbjct: 259 MKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGK 318
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ + ++ +++ + NV Y++++ D++E +++ M K C+P+ +++I
Sbjct: 319 VSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNI 378
Query: 467 MTEAYAKEGMNDKVYALEQEKLQ 489
+ Y K D+ L E +
Sbjct: 379 LINGYCKAKRIDEAMQLFNEMIH 401
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 141/329 (42%), Gaps = 14/329 (4%)
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
+L V ++++ G++PT +T L+ C+ +A + M CQPDVYTY+T
Sbjct: 145 DLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDM-VAKGCQPDVYTYNT 203
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
+I L + M+E PN VT + ++ + + ++ + S M ++
Sbjct: 204 IINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYM-KAK 262
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYE------KFRNFGIDPETRTFNILIGAYGKK 334
PD++T +++ RW E + + I P+ TFN+L+ + K+
Sbjct: 263 GISPDIFTYTSLIQGLCK------FSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKE 316
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
+ V++ M ++ TY++++ +S D F M +G K + ++
Sbjct: 317 GKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSY 376
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
LINGY A + + + N YN +I + L E + +++ M
Sbjct: 377 NILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCT 436
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
PD T+SI+ + + K+G K + L
Sbjct: 437 NGNLPDLFTYSILLDGFCKQGYLGKAFRL 465
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 107/259 (41%), Gaps = 49/259 (18%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPEL--ARKV 166
N + +TF + + +AL V + + E +P TY L+ G S ++ ARK+
Sbjct: 307 NVLVDTFCK---EGKVSEALGVLKTMTEMGV-EPNVVTYSSLMY--GYSLWTDVVEARKL 360
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
F+ M+ +G +P Y L+ YC+ IDEA N+M P+ +Y+TLI
Sbjct: 361 FHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEM-IHQGLTPNNVSYNTLIHGFC 419
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM---------- 276
+ + L+++M P+ T +I+L G+ K G + R+ M
Sbjct: 420 QLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLV 479
Query: 277 ----LESATCK--------------------PDVWTMNTILSVFANKGQVDMMERWYEKF 312
L A CK P V TI++ +G +++ E F
Sbjct: 480 MYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEG---LLDEALEAF 536
Query: 313 RNF---GIDPETRTFNILI 328
RN G P+ ++N++I
Sbjct: 537 RNMEADGCPPDEISYNVII 555
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A ++F + + + +P Y L+ + KSG + ARK+F+E+ +G++P +LYT +
Sbjct: 461 KAFRLFRAM-QSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTI 519
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
+ C+ L+DEA M+ C PD +Y+ +I+
Sbjct: 520 INGLCKEGLLDEALEAFRNMEA-DGCPPDEISYNVIIRG 557
>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 576
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 118/529 (22%), Positives = 219/529 (41%), Gaps = 58/529 (10%)
Query: 13 SSSLLPSPLPHPHDTKTNKHRAQVPNFNLIHCSVTSTN-----KHTSFSSESAVAAKKRL 67
S++++ +P ++ +K R N N H VTS++ +H F + A RL
Sbjct: 28 SNTVITCRIPLLNEDNPSKRRLNNNNNNKGHTRVTSSDTRPQQQHYDFRDTHHMKALNRL 87
Query: 68 WKEGEYPG----VSETSIPGYRSKRTPIKNLKKKL--ERKAKAKAWVNTVAETFSD---- 117
K G+Y + + GY+ L K L ++ + V + E + D
Sbjct: 88 CKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYGDPDSF 147
Query: 118 -------HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEM 170
+ F A + + + P TY L+ L G+ +LA KV +++
Sbjct: 148 AYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQL 207
Query: 171 VEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAM 229
+E+ PT YT L+ A + ID+A L++M + QPD+YTY+ +++ C +
Sbjct: 208 LEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMS-RGLQPDMYTYNVIVRGMCKRGL 266
Query: 230 -------------------------------RFELIETLYQDMDERSVTPNTVTQNIVLG 258
R+E E L DM + PN VT ++++
Sbjct: 267 VDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLIS 326
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
+ G + VL M E PD + + ++S F +G+VD+ + + + G
Sbjct: 327 SLCRDGKAGEAVDVLRVMKEKGL-NPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWL 385
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P+ +N ++G+ KK D+ ++ + + ++ P +S+YN + A GD
Sbjct: 386 PDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRALTM 445
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
+M + G+ D T+ LI+ G+ + I + + + V YN V+ K
Sbjct: 446 ILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCK 505
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEK 487
A +++ V M + C+P+ T++++ E G + YA+E K
Sbjct: 506 AHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAGW--RSYAVELAK 552
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 149/327 (45%), Gaps = 7/327 (2%)
Query: 159 QPELARKVFNEMVEE-GIEPTPEL--YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
+ EL +FN M+ E I+ TP+L Y+ L+ +CR ++ F T + + +
Sbjct: 71 ESELVVSLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILK-SGWRVNN 129
Query: 216 YTYSTLIKACVDAMRF-ELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
+ L+K DA R E ++ L + M E TP+ V+ N +L G+ ++ +L
Sbjct: 130 IVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLH 189
Query: 275 GMLESA--TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
M +S +C P+V + T+++ F +GQVD + + + GI P T+ +I
Sbjct: 190 MMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLC 249
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K ++ D+ V + M + TYN +I + +G K + E+M A G+K D
Sbjct: 250 KAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCY 309
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
T+ L+N N G + + I NV+ Y +I L EM + M
Sbjct: 310 TYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLM 369
Query: 453 KEKHCRPDSETFSIMTEAYAKEGMNDK 479
E PD F+I+ AYAK+ M D+
Sbjct: 370 VENGLSPDHHIFNIIFTAYAKKAMIDE 396
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 153/373 (41%), Gaps = 7/373 (1%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQ--PKEGTYMKLLVLLGKSGQPELARKV 166
NT+ + F + +K+ +AL++ M+ + P +Y ++ GQ + A +
Sbjct: 169 NTLLKGFCN---EKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNL 225
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
F EM++ GI+P YT ++ C+ ++D A QM +PD TY+ LI +
Sbjct: 226 FLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMID-KGVKPDNDTYNCLIHGYL 284
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
+++ + + ++M + P+ T +L G + M+ KP+V
Sbjct: 285 SIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGI-KPNV 343
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
++ +A KG + M G+ P+ FNI+ AY KK M D+ +
Sbjct: 344 AIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNK 403
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M++ + +I+A +G F QM EG+ + F L+ G
Sbjct: 404 MKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDK 463
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ K I +V F+N ++ +M+ +R+ M+ RPD +++
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTT 523
Query: 467 MTEAYAKEGMNDK 479
+ + G D+
Sbjct: 524 LIGGHCLVGRIDE 536
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/393 (20%), Positives = 158/393 (40%), Gaps = 22/393 (5%)
Query: 115 FSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG 174
F+ + K +A+ +F +K+Q P + L+ L K G+ + A FN+M+ EG
Sbjct: 385 FTAYAKKAMIDEAMHIFNKMKQQGL-SPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEG 443
Query: 175 IEPTPELYTALLAAYCRNSLIDEA----FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMR 230
+ P ++ +L+ C ++A F LNQ +PDV ++T++ +
Sbjct: 444 VAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQ-----GIRPDVVFFNTILCNLCTKGQ 498
Query: 231 FELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMN 290
+ L M+ P+ ++ ++GG+ G D+ + L ML S KPD WT N
Sbjct: 499 VMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVML-SVGLKPDEWTYN 557
Query: 291 TILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
T+L + G++D + + GI P T++ ++ R + + + M
Sbjct: 558 TLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITS 617
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
W YN ++ S F+ + ++ + + TF +I +G
Sbjct: 618 GKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDA 677
Query: 411 ISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
+ S + +V Y + I+ L E + ++ M++ P+S + +
Sbjct: 678 MHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRR 737
Query: 471 YAKEG-----------MNDKVYALEQEKLQMLL 492
G +++K ++LE ML+
Sbjct: 738 LLHRGDITRAGAYLSKLDEKNFSLEASTTAMLI 770
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 153/350 (43%), Gaps = 4/350 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P + ++ L +SG + A FN + E G+ P +YT L+ YCR +I EA
Sbjct: 363 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNL 422
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
N+M C DV TY+T++ + L+ +M ER + P++ T I++ G+
Sbjct: 423 RNEMLQ-QGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHC 481
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G + M E K DV T NT+L F G +D + + + I P
Sbjct: 482 KLGNLQNAMELFKKMKEKRI-KLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP 540
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+F+IL+ A K + V + M T N++I+ + G+A E E+
Sbjct: 541 ISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEK 600
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ--IAENVSFYNAVISACIKA 439
M +EG D ++ LI G+ K V+ + Q + +V YN+++ +
Sbjct: 601 MISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRE 660
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ + E E V ++M E+ PD T++ + + + + + E LQ
Sbjct: 661 NQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQ 710
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 143/322 (44%), Gaps = 2/322 (0%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L K G+ E +E+ E+G+ P Y L++AY L++EAF ++ M + P
Sbjct: 235 LCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPS-KGFSP 293
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
VYTY+T+I ++E + ++ +M ++P++ T +L K G + E +
Sbjct: 294 GVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIF 353
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
S M S PD+ ++++S+F G +D ++ + G+ P+ + ILI Y +
Sbjct: 354 SDM-RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 412
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
K M + ++ M + TYN ++ + F +M G+ D+ T
Sbjct: 413 KGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYT 472
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
LI+G+ G + + + +I +V YN ++ K D+ + ++ M
Sbjct: 473 LTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 532
Query: 454 EKHCRPDSETFSIMTEAYAKEG 475
K P +FSI+ A +G
Sbjct: 533 SKEILPTPISFSILVNALCSKG 554
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/377 (20%), Positives = 160/377 (42%), Gaps = 10/377 (2%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPF--YQPKEGTYMKLLVLLGKSGQPELARKV 166
NT+ +S L ++ FE++ P + P TY ++ L K G+ E A++V
Sbjct: 264 NTLISAYSSQGLMEE------AFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEV 317
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
F EM+ G+ P Y +LL C+ E + M++ + PD+ +S+++
Sbjct: 318 FAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRS-RDVVPDLVCFSSMMSLFT 376
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
+ + + + E + P+ V I++ GY + GM + + + ML+ C DV
Sbjct: 377 RSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQG-CAMDV 435
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
T NTIL + + ++ + + G+ P++ T ILI + K + +
Sbjct: 436 VTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKK 495
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M++ + TYN +++ F +GD + + M ++ + +F L+N + G
Sbjct: 496 MKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGH 555
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ I V N++I ++ + + E ++M + PD +++
Sbjct: 556 LSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNT 615
Query: 467 MTEAYAKEGMNDKVYAL 483
+ + KE K + L
Sbjct: 616 LIYGFVKEENMSKAFGL 632
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 15/213 (7%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
A+++F+ +KE+ + TY LL GK G + A++++ +MV + I PTP ++ L
Sbjct: 488 NAMELFKKMKEKRI-KLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSIL 546
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A C + EAF ++M + + +P V +++IK + E + M
Sbjct: 547 VNALCSKGHLSEAFRVWDEMIS-KSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEG 605
Query: 246 VTPNTVTQNIVLGGYGKA-------GMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
P+ ++ N ++ G+ K G+ +ME G++ PDV+T N+IL F
Sbjct: 606 FVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLV------PDVFTYNSILHGFCR 659
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+ Q+ E K G++P+ T+ LI +
Sbjct: 660 ENQMKEAEAVLRKMIERGVNPDRSTYTSLINGF 692
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/302 (19%), Positives = 131/302 (43%), Gaps = 7/302 (2%)
Query: 191 RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT 250
R S + + + + T NC + + LI+ V A + + + + T +
Sbjct: 131 RRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSI 190
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYE 310
N ++G + G + R+ + S +V+T+N +++ G+++ + +
Sbjct: 191 DACNALIGSLVRIGWVELAWRIYQEISRSGV-GVNVYTLNIMVNALCKDGKMEKVGTFLS 249
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
+ + G+ P+ T+N LI AY + + ++ +M M F TYN VI G
Sbjct: 250 EVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHG 309
Query: 371 DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVS 427
+ + F +M G+ D+ T+ L+ G + + + S ++ + ++
Sbjct: 310 KYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG---DAVETENIFSDMRSRDVVPDLV 366
Query: 428 FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEK 487
+++++S ++ +L + + +KE PD+ ++I+ + Y ++GM + L E
Sbjct: 367 CFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEM 426
Query: 488 LQ 489
LQ
Sbjct: 427 LQ 428
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 164/371 (44%), Gaps = 16/371 (4%)
Query: 119 VLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPT 178
V + W +AL FE L P +L +LG++ Q +A +VF EG T
Sbjct: 165 VGESSWRRALDAFEWLARSS--APASRAVAVVLGVLGRARQDSIAEEVFLRFAGEG--AT 220
Query: 179 PELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-----CVDA-MRFE 232
+++ A++ Y R+ D+A L+ M PD+ +++TLI A C+ A + +
Sbjct: 221 VQVFNAMMGVYARSGRFDDARQLLDTMHD-RGIDPDLVSFNTLINARSKSGCLAAGVALD 279
Query: 233 LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTI 292
L+ + Q + P+ +T N ++ ++ + V M+ S C+PD+WT N +
Sbjct: 280 LLFEVRQS----GLRPDVITYNTLISACSQSSNLEDAVTVFEDMIAS-ECRPDLWTYNAM 334
Query: 293 LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF 352
+SV G+ + ER + + G P+ T+N L+ A+ K+ DK+ E + K F
Sbjct: 335 VSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGF 394
Query: 353 PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVIS 412
TYN +I + MG +++M A G D T+ +I+ +
Sbjct: 395 KKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGK 454
Query: 413 SVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
+ + + + ++A+I A K + E + M +PD + +M + +A
Sbjct: 455 VLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFA 514
Query: 473 KEGMNDKVYAL 483
+ G +K+ L
Sbjct: 515 RSGDTEKMLCL 525
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 153/354 (43%), Gaps = 4/354 (1%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K W QA + + L++ + + L+ +SG E AR VF+ M++ G PT +
Sbjct: 760 KLWQQAEILVKGLRQASGIDRR--IWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDS 817
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
++ A + +DE +V + +++ + N + T L+ A A + +Y M
Sbjct: 818 VNGMMRALIVDGRLDELYVVVEELQDM-NFKISKSTVLLLLDAFAKAGDVFEVMKIYNGM 876
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
PN ++ F +E +++ M E A KPD+ +N +L+++ G
Sbjct: 877 KAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEM-EGAGFKPDLAILNALLNMYTAAGN 935
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
D + Y G++P+ T+N LI Y + ++ +++ M K +Y +
Sbjct: 936 FDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKS 995
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
++ A + + + FE+M ++ + + + ++ Y NAG K + + + +
Sbjct: 996 LLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDG 1055
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
I ++ + ++++ A E E V +K + +S + +AY K G
Sbjct: 1056 IEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAYLKNG 1109
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 127/308 (41%), Gaps = 10/308 (3%)
Query: 119 VLKKQWFQALQVFEMLK-----EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE 173
+L + +A VFE++K + Y P Y ++ LL + + EM
Sbjct: 855 LLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGA 914
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
G +P + ALL Y D + +PD TY+TLI + R E
Sbjct: 915 GFKPDLAILNALLNMYTAAGNFDRTTQVYRSILE-AGLEPDEDTYNTLIVMYCRSFRPEE 973
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
TL +M +R +TP + +L KA + +Q +++ M S + + + + ++
Sbjct: 974 GFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEM-RSKSYQLNRSIYHMMM 1032
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
++ N G E + GI+P T +IL+ +YG + +V+ ++
Sbjct: 1033 KIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLE 1092
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
++ Y+ V +A+ GD H +M +G++ D + + C I A L + +
Sbjct: 1093 VSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRA---ASLCEQTADA 1149
Query: 414 VRLASKLQ 421
+ L LQ
Sbjct: 1150 ILLLKSLQ 1157
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/312 (17%), Positives = 124/312 (39%), Gaps = 39/312 (12%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A +VF +M GIE + +Y ++++ YC+ + A
Sbjct: 694 ACQVFCDMQFIGIEASKSIYESIISTYCKLGFPETA------------------------ 729
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVT-QNIVLGGYGKAGMFDQMERVLSGMLESAT 281
L D + + N ++ + I++ YGK ++ Q E ++ G+ +++
Sbjct: 730 ------------HRLMDDALQSGIPLNILSCRVIIIEAYGKIKLWQQAEILVKGLRQASG 777
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
+W N ++ +A G + ++ G P + N ++ A D++
Sbjct: 778 IDRRIW--NALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELY 835
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
V+E ++ + F + ST +++AF+ GD + + M A G + + +I+
Sbjct: 836 VVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLL 895
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
+ F V + +++ NA+++ A + +VY+ + E PD
Sbjct: 896 CHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDE 955
Query: 462 ETFSIMTEAYAK 473
+T++ + Y +
Sbjct: 956 DTYNTLIVMYCR 967
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 4/173 (2%)
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P +R +++G G+ R V ++R T +N ++ ++ G
Sbjct: 186 PASRAVAVVLGVLGRARQDSIAEEV--FLRFAGEGATVQVFNAMMGVYARSGRFDDARQL 243
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ--IAENVSFYNAVISAC 436
+ MH G+ D +F LIN + +G ++ L Q + +V YN +ISAC
Sbjct: 244 LDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISAC 303
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
++ +L + V++ M CRPD T++ M + + G ++ L +E ++
Sbjct: 304 SQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVE 356
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 116/307 (37%), Gaps = 7/307 (2%)
Query: 190 CRNSLIDEAFVTLNQ--MKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVT 247
CR A+ +Q M P+ ++Y Y LI ++A F ++ DM +
Sbjct: 650 CRKQTSISAYEQYSQRLMLKYPDQNCNLYEY--LITCLIEAEFFSEACQVFCDMQFIGIE 707
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMER 307
+ ++ Y K G + R++ L+S + I+ + E
Sbjct: 708 ASKSIYESIISTYCKLGFPETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIKLWQQAEI 767
Query: 308 WYEKFRNF-GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ R GID R +N LI AY + +Y+K +V + M K T + N ++ A
Sbjct: 768 LVKGLRQASGID--RRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRAL 825
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G + E++ K T L++ +A AG +V+ N+
Sbjct: 826 IVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNM 885
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
Y ++IS + ++E + M+ +PD + + Y G D+ + +
Sbjct: 886 HLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRS 945
Query: 487 KLQMLLE 493
L+ LE
Sbjct: 946 ILEAGLE 952
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 63/356 (17%), Positives = 142/356 (39%), Gaps = 17/356 (4%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P Y+ +L + +SG E ++ +M+ + P ++Y LL A + +E
Sbjct: 500 KPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEE 559
Query: 201 TLNQMKTLPNCQPDVYTYST-LIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
+ M+ L C+ ++ ST LIKA CV L + Q P+ + ++
Sbjct: 560 VIQDMELL--CRMNLGIISTMLIKARCVSQGAKLLKKACLQ-----GYKPDIKSLRSIMN 612
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
Y ++ +L + E + D+ + +I+ + + + E++ ++ D
Sbjct: 613 AYVMTEKHEEGLSLLECICEHVSFSQDLISECSIMLLCRKQTSISAYEQYSQRLMLKYPD 672
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
+ LI + + + V M+ + + S Y ++I + +G +
Sbjct: 673 QNCNLYEYLITCLIEAEFFSEACQVFCDMQFIGIEASKSIYESIISTYCKLGFPETAHRL 732
Query: 379 FEQMHAEGMKADTKTF-CCLINGYANAGLFHK---VISSVRLASKLQIAENVSFYNAVIS 434
+ G+ + + +I Y L+ + ++ +R AS + + +NA+I
Sbjct: 733 MDDALQSGIPLNILSCRVIIIEAYGKIKLWQQAEILVKGLRQASGI----DRRIWNALIH 788
Query: 435 ACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
A ++ + V+ M + P ++ + M A +G D++Y + +E M
Sbjct: 789 AYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDM 844
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 155/384 (40%), Gaps = 35/384 (9%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y P Y +L+ L + P AR++ M+ +G+ P Y L+ A C +EA
Sbjct: 116 YAPSLLAYNAVLLALSDASLPS-ARRLLASMLRDGVAPNVYTYNILVRALCARGQREEAL 174
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+ C P+V TY+TL+ A A + E L M E V P+ VT N V+ G
Sbjct: 175 GVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNG 234
Query: 260 YGKAG-------MFDQMER-------VLSGMLESATCK--------------------PD 285
KAG MFD+M R V L S CK PD
Sbjct: 235 LCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPD 294
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
V T +++ G ++ + R G+ TF LI + + D M+
Sbjct: 295 VVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMK 354
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
MR+ + + YN +I + +G +M A+GMK D T+ +++GY G
Sbjct: 355 EMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIG 414
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
R K + + Y+++I + L + ++++M + +PD T++
Sbjct: 415 DTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYT 474
Query: 466 IMTEAYAKEGMNDKVYALEQEKLQ 489
+ + + KEG K +L E ++
Sbjct: 475 TLIDGHCKEGNVQKALSLHDEMIK 498
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 169/403 (41%), Gaps = 60/403 (14%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P T+ ++ L K+G+ E ARK+F+EM EG+ P Y L++ YC+ + EA
Sbjct: 222 RPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALA 281
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS--------------- 245
+M PDV T+++LI A A E L M ER
Sbjct: 282 VFAEMAQ-KGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGF 340
Query: 246 --------------------VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
+ P+ V N+++ GY K G D+ ++ M E+ KPD
Sbjct: 341 CRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEM-EAKGMKPD 399
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
V T +TILS + G D K G+ P+ T++ LI ++R + E
Sbjct: 400 VVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFE 459
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
M +L TY +I+ G+ + ++M +G+ D T+ LI+G + +
Sbjct: 460 KMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSA 519
Query: 406 LFHKVISSVRLASKL----QIAENVSFYNAVISACIKAD--------------DLM-EME 446
+ + RL KL + +N+ Y A++ C A+ LM + +
Sbjct: 520 ---RTKEAQRLLFKLYYEDPVPDNIK-YEALMHCCRTAEFKSVVALLKGFSMKGLMNQAD 575
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+VY+ M ++H + D +S++ + + G K + ++ L+
Sbjct: 576 KVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLR 618
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/402 (20%), Positives = 156/402 (38%), Gaps = 53/402 (13%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL VF + ++ P T+ L+ + ++G E A + +M E G+ +TAL
Sbjct: 278 EALAVFAEMAQKGVV-PDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTAL 336
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +CRN +D+A + + +M+ QP V Y+ LI R + L +M+ +
Sbjct: 337 IDGFCRNGFLDDALLAMKEMREC-RIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKG 395
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+ VT + +L GY K G D + ML+ PD T ++++ + ++
Sbjct: 396 MKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVV-PDAITYSSLIRGLCEERRLGDA 454
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+EK G+ P+ T+ LI + K+ K S+ + M K TY+ +I+
Sbjct: 455 CELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDG 514
Query: 366 FSDMGDAKHMEYTFEQMHAE-----GMKADTKTFCC------------------------ 396
S K + +++ E +K + CC
Sbjct: 515 LSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQA 574
Query: 397 ---------------------LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
LI+G+ G K +S + + + N + +++
Sbjct: 575 DKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRG 634
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
+ +E + V + + D+ET + + KEG+
Sbjct: 635 LFEEGMTVEADNVIQELLNCCSLADAETSKALIDLNRKEGVG 676
>gi|302789998|ref|XP_002976767.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
gi|300155805|gb|EFJ22436.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
Length = 669
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 186/419 (44%), Gaps = 15/419 (3%)
Query: 77 SETSIPGYRSKRTP--------IKNLKKKLERKAKAKAWVNTVAETFSDHVLKK--QWFQ 126
S +IP Y +K TP +K ++K +A ++W +++ VL +W +
Sbjct: 66 SAKTIPRY-TKWTPQFARVDEVLKIVQKTGNVEAALESWDKSLSAKNIVTVLNNINRWEK 124
Query: 127 ALQVFEMLKEQP-FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
AL FE LK +P Y+ TY +L +L Q EL+ K+ EM GI+P ++ L
Sbjct: 125 ALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFSTL 184
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ R +EA +MK+ PD TY+++I R LY+ + +
Sbjct: 185 INCAKRCRQPEEALKWFERMKS-EGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVN 243
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+TVT + Y +AG + + +++ M +S + P+ MNT++ + G+V+
Sbjct: 244 WKLDTVTYGAIANVYARAGDYQSIMQLVQEMRDSGS-SPNAVIMNTLMGTLSKAGKVNQA 302
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++ + + R G+ P T +IL+ Y + YD+ V E ++ + + YN++++A
Sbjct: 303 KKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKA 362
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ G + E ++M G D T+ +N YA G+ L +
Sbjct: 363 CVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNGKPD 422
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKH-CRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ +I AC A ++ + +++ M E C PD ++ A +D+ A+
Sbjct: 423 TPLFTVMIRACKLAGEIEQASKIFDEMMESGCCSPDERVSGMLLSCMAMAKSDDERLAI 481
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 110/514 (21%), Positives = 215/514 (41%), Gaps = 32/514 (6%)
Query: 6 ASASLSFSSSLLPSPLPHPHDTKTNKHRAQVPNFNLIHCSVTSTNKHTSFSSESAVAAKK 65
+S+ F + +L P P+ N+ ++ NFN + +++S N+ +
Sbjct: 13 SSSPPGFGTCVLSLP-PYFSSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFN 71
Query: 66 RLW----KEGEYPGVSETS-------IPGYRSKRTPIKNLKKKLERKAKA--------KA 106
RL K +YP V S IP + N L R A K
Sbjct: 72 RLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKL 131
Query: 107 WVNTVAETFSDHV----LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPEL 162
+ TF+ + ++ + AL +F+ + + F QP TY L+ L K G
Sbjct: 132 GLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGF-QPNVVTYGTLINGLCKVGNTNA 190
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A ++ M + +P +YT+++ + C++ + EAF ++M PD++TY++LI
Sbjct: 191 AIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVG-QGISPDIFTYTSLI 249
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
+ + ++ + TL M + P+ V + V+ K G + V+ M+
Sbjct: 250 HSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGV- 308
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
+P+V T N ++ + ++D + ++ + G P ++N LI Y K + DK +
Sbjct: 309 EPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATY 368
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+ E M + + + TYN ++ +G + F +M A G D T+ L++
Sbjct: 369 LFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLC 428
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
+ ++ ++ + ++ Y VI +A +L ++ + K RP+
Sbjct: 429 KKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVR 488
Query: 463 TFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
T++IM + G+ D E KL M ++ +G
Sbjct: 489 TYTIMINGLCRRGLLD-----EANKLFMEMDGNG 517
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 110/279 (39%), Gaps = 35/279 (12%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L K G+ A V + M+ G+EP Y AL+ +C S +DEA + M P
Sbjct: 287 LCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM-VHNGYAP 345
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------MF 266
+V +Y+TLI R + L+++M ++ + PNTVT N ++ G G +F
Sbjct: 346 NVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALF 405
Query: 267 DQME-----------RVLSGML----------------ESATCKPDVWTMNTILSVFANK 299
+M R+L L E + PD+ ++
Sbjct: 406 HEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRA 465
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G+++ + + G+ P RT+ I+I ++ + D+ + + M TY
Sbjct: 466 GELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTY 525
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
N + + +A ++M A G AD T L+
Sbjct: 526 NTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLV 564
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 104/251 (41%), Gaps = 3/251 (1%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H L+ + +A++VF+ + Y P +Y L+ K + + A +F EM ++ + P
Sbjct: 322 HCLQSEMDEAVKVFDTMVHNG-YAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIP 380
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
Y L+ C + +A ++M PD+ TY L+ + L
Sbjct: 381 NTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQI-PDLATYRILLDYLCKKSHLDEAMAL 439
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
+ ++ ++ P+ IV+ G +AG + + S L S +P+V T +++
Sbjct: 440 LKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSN-LSSKGLRPNVRTYTIMINGLC 498
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+G +D + + + G P+ T+N + + + + +++ M F S
Sbjct: 499 RRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVS 558
Query: 358 TYNNVIEAFSD 368
T ++E D
Sbjct: 559 TTTLLVEMLCD 569
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 1/141 (0%)
Query: 117 DHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIE 176
D++ KK E P Y ++ + ++G+ E AR +F+ + +G+
Sbjct: 425 DYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLR 484
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
P YT ++ CR L+DEA +M C PD TY+T+ + +
Sbjct: 485 PNVRTYTIMINGLCRRGLLDEANKLFMEMDG-NGCSPDGCTYNTITQGLLQNKEALRAIQ 543
Query: 237 LYQDMDERSVTPNTVTQNIVL 257
L Q+M R + + T +++
Sbjct: 544 LLQEMLARGFSADVSTTTLLV 564
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 159/343 (46%), Gaps = 2/343 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY ++ L K G +LA + N+M IE +Y+ ++ + C+ D+A
Sbjct: 222 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALN 281
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M+ +P+V TYS+LI + R+ L DM ER + PN VT N ++ +
Sbjct: 282 LFTEMEN-KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAF 340
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + E++ M++ + PD++T +++++ F ++D + +E + P
Sbjct: 341 VKEGKLVEAEKLYDEMIKRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 399
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+N LI + K + D+ + M + + TY +I F D + + F+
Sbjct: 400 VVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 459
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
QM ++G+ + T+ L++G G K + + ++ + YN +I KA
Sbjct: 460 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 519
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ + ++ + K +PD ++ M + ++G+ ++ AL
Sbjct: 520 KVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADAL 562
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 151/373 (40%), Gaps = 53/373 (14%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ + Q LA + +M++ G EP+ ++LL YC I +A ++QM
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ +PD T++TLI + L M +R PN VT +V+ G K G
Sbjct: 182 VEM-GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 266 FDQMERVLSGM----------------------------------LESATCKPDVWTMNT 291
D +L+ M +E+ +P+V T ++
Sbjct: 241 IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 300
Query: 292 ILSVFANKGQVDMMERWYEKFRNFG------IDPETRTFNILIGAYGKKRMYDKMSSVME 345
++S N ERW + R I+P TFN LI A+ K+ + + +
Sbjct: 301 LISCLCN------YERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYD 354
Query: 346 YMRKLQFPWTSSTYNNVIEAF---SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
M K TY+++I F + +AKHM FE M ++ + T+ LING+
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM---FELMISKDCFPNVVTYNTLINGFC 411
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
A + + R S+ + N Y +I +A D + V+K+M P+
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471
Query: 463 TFSIMTEAYAKEG 475
T++ + + K G
Sbjct: 472 TYNTLLDGLCKNG 484
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 126/313 (40%), Gaps = 73/313 (23%)
Query: 80 SIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPF 139
S+ YR + + NL ++E K + V T + S ++W A ++ + E+
Sbjct: 269 SLCKYRHEDDAL-NLFTEMENKG-VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
P T+ L+ K G+ A K+++EM++ I+P Y++L+ +C + +DEA
Sbjct: 327 -NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS-------------- 245
M + +C P+V TY+TLI A R + L+++M +R
Sbjct: 386 HMFELMIS-KDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHG 444
Query: 246 ---------------------VTPNTVTQNIVLGGYGKAG-------MFDQMER------ 271
V PN +T N +L G K G +F+ ++R
Sbjct: 445 FFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 504
Query: 272 ------VLSGMLESA---------------TCKPDVWTMNTILSVFANKGQVDMMERWYE 310
++ GM ++ KPDV NT++S F KG + + +
Sbjct: 505 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFR 564
Query: 311 KFRNFGIDPETRT 323
K R G P++ T
Sbjct: 565 KMREDGPLPDSGT 577
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/293 (19%), Positives = 127/293 (43%), Gaps = 14/293 (4%)
Query: 191 RNSL----IDEAFVTLNQM-KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
RN L +D+A M K+ P P ++ ++ L+ A +F+L+ +L + M
Sbjct: 58 RNGLHSMKLDDAIGLFGGMVKSRP--LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLG 115
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
++ N T NI++ + + +L M++ +P + T++++L+ + + ++
Sbjct: 116 ISHNLYTYNILINCFCRRSQISLALALLGKMMKLGY-EPSIVTLSSLLNGYCHGKRISDA 174
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++ G P+T TF LI + ++++ M + TY V+
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---I 422
GD +M A ++A+ + +I+ + ++ L ++++ +
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCK---YRHEDDALNLFTEMENKGV 291
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
NV Y+++IS + + R+ M E+ P+ TF+ + +A+ KEG
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEG 344
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/248 (17%), Positives = 99/248 (39%), Gaps = 1/248 (0%)
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y +++ + +M+ + L+ M + P+ N +L K FD + L +
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVIS-LGEKM 111
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
+ +++T N +++ F + Q+ + K G +P T + L+ Y +
Sbjct: 112 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
++++ M ++ + + T+ +I A ++M G + + T+ +
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
+NG G + + +I NV Y+ VI + K + ++ M+ K
Sbjct: 232 VNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 291
Query: 458 RPDSETFS 465
RP+ T+S
Sbjct: 292 RPNVITYS 299
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 64/165 (38%)
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P FN L+ A K + +D + S+ E M++L TYN +I F
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
+M G + T L+NGY + ++ V ++ + + +I
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ E + RM ++ C+P+ T+ ++ K G D + L
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 247
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 190/425 (44%), Gaps = 60/425 (14%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE-GIEPTPELYTA 184
+++QVF +K P T+ LL++L K G+ +A+ VF+EM+ G+ P +
Sbjct: 174 ESVQVFNSMKSVGV-SPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNI 232
Query: 185 LLAAYCRNSLIDEAF---------------VTLNQM---------------------KTL 208
L+ +C+NS++DE F VT N + K
Sbjct: 233 LIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKS 292
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETL--YQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
N PDV TY+TL++ M+ E+ E L +++M + + PN +T N ++ G +
Sbjct: 293 TNLNPDVVTYTTLVRGY--CMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKI 350
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
D+++++ G L PD T+NT+++ N G ++ +EK + P++ T+++
Sbjct: 351 DKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSV 410
Query: 327 LI------GAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
LI G + + ++++D++S +R + Y ++ E G E F
Sbjct: 411 LIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVF 470
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI-K 438
Q+ G + D +F LI G+ G F + L + ++ Y ++I + K
Sbjct: 471 RQLMKRGTQ-DPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQK 529
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETF-SIMTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
+ L+ + + K +K H P++ TF SI+ AK A E + ML+ G
Sbjct: 530 GEPLVAYQTLEKMIKSSHV-PETSTFHSILARLLAKG------CAHESARFIMLM-LEGK 581
Query: 498 WQQNI 502
+QNI
Sbjct: 582 IRQNI 586
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 156/339 (46%), Gaps = 12/339 (3%)
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
GK+G + + +VFN M G+ P+ + +LL + + A ++M + PD
Sbjct: 167 GKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPD 226
Query: 215 VYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
YT++ LI+ C ++M E +++M P+ VT N ++ G +AG + V+
Sbjct: 227 TYTFNILIRGFCKNSMVDEGFR-FFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVV 285
Query: 274 SGMLESAT-CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
+GM++ +T PDV T T++ + K ++D +E+ + G+ P T+N LI
Sbjct: 286 NGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLC 345
Query: 333 KKRMYDKMSSVME-YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
+ + DK+ + E + F + T N ++ A + G+ FE+M ++ D+
Sbjct: 346 EVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDS 405
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAEN-------VSFYNAVISACIKADDLME 444
T+ LI G F + S+ +I V+ Y ++ + +
Sbjct: 406 ATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAK 465
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
ERV++++ ++ + D +F I+ + + +EG + Y L
Sbjct: 466 AERVFRQLMKRGTQ-DPLSFKILIKGHCREGTFEAGYEL 503
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 146/345 (42%), Gaps = 9/345 (2%)
Query: 160 PELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPN--CQPDVYT 217
P A + FN E G + Y +L R ++ A L +K N + +
Sbjct: 99 PSKALQFFNWAPELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRF 158
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
+++LI++ A F+ ++ M V+P+ VT N +L K G + + V ML
Sbjct: 159 FNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEML 218
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
+ PD +T N ++ F VD R++++ F DP+ T+N L+ +
Sbjct: 219 STYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKV 278
Query: 338 DKMSSVMEYMRKLQFPWTSS--TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
+ +V+ M K TY ++ + + FE+M ++G+K + T+
Sbjct: 279 NIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYN 338
Query: 396 CLINGYANAGLFHKV--ISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
LI G K+ I L I + + N +++A A +L + V+++M
Sbjct: 339 TLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTL-NTLMNAHCNAGNLNDALEVFEKMM 397
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDKVYAL--EQEKLQMLLEASG 496
+ RPDS T+S++ + G ++ L E + ++LL G
Sbjct: 398 VLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDG 442
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 138/344 (40%), Gaps = 48/344 (13%)
Query: 131 FEMLKEQPFYQ--PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL--YTALL 186
F KE ++ P TY L+ L ++G+ +A V N MV++ P++ YT L+
Sbjct: 247 FRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLV 306
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD-MDERS 245
YC IDEA V +M + +P+ TY+TLIK + + + I+ +++ +
Sbjct: 307 RGYCMKHEIDEALVVFEEMVS-KGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGG 365
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+T T N ++ + AG + V M+ +PD T + ++ +G +
Sbjct: 366 FIPDTCTLNTLMNAHCNAGNLNDALEVFEKMM-VLNVRPDSATYSVLIRNLCQRGNFERA 424
Query: 306 ERWYEKF-------RNFGIDP----------------------------------ETRTF 324
E+ +++ R+ G P + +F
Sbjct: 425 EQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQDPLSF 484
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
ILI + ++ ++ ++ M + F TY ++I+ G+ T E+M
Sbjct: 485 KILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIK 544
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSF 428
+T TF ++ G H+ + L + +I +N++
Sbjct: 545 SSHVPETSTFHSILARLLAKGCAHESARFIMLMLEGKIRQNINL 588
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 171/380 (45%), Gaps = 16/380 (4%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W +A Q+ + + E+ P TY L+ K G+ A ++++EM+ GI P+ Y
Sbjct: 270 RWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITY 329
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
++++ +C+ + +D A M T C PD+ T++TLI A R + L +M
Sbjct: 330 SSMIDGFCKQNRLDAAEHMFYLMAT-KGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMT 388
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
E + NT+T ++ G+ + G + + +L M+ S C P+V T NT+L + G++
Sbjct: 389 EAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVC-PNVVTCNTLLDGLCDNGKL 447
Query: 303 -DMMERW---------YEKFRNF-GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
D +E + + F G++P+ +T+NILI + + + + E M
Sbjct: 448 KDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 507
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
+ TYN+VI F+ M ++ + TF LINGY AG +
Sbjct: 508 IVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGL 567
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF-SIMTEA 470
+ I N Y +I K ++ +++ M PD+ T +++T
Sbjct: 568 ELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGL 627
Query: 471 YAKEGMNDKVYALEQEKLQM 490
++KE + V LE LQM
Sbjct: 628 WSKEELKRAVAMLED--LQM 645
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 160/371 (43%), Gaps = 23/371 (6%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F + +P T+ L+ L + G+ A + + M+E+G++P Y +
Sbjct: 166 EALDLFHQM-----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTI 220
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTY-----STLIKACVDAMRFELIETLYQD 240
+ C+ A L +M+ + + +P+V + + +I + R+ + L Q+
Sbjct: 221 VDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQE 280
Query: 241 MDER-SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
M ER ++P+ VT N ++ + K G F + E + ML P T ++++ F +
Sbjct: 281 MLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII-PSTITYSSMIDGFCKQ 339
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
++D E + G P+ TFN LI Y + + D ++ M + + TY
Sbjct: 340 NRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITY 399
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+I F +GD + ++M + G+ + T L++G + G + + K
Sbjct: 400 TTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQK 459
Query: 420 LQ-----------IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ + +V YN +IS I +E E +Y+ M + PD+ T++ +
Sbjct: 460 SKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVI 519
Query: 469 EAYAKEGMNDK 479
K+ D+
Sbjct: 520 HGLCKQSRLDE 530
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 148/355 (41%), Gaps = 18/355 (5%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVE-EGIEPTPELY-----TALLAAYCRNSL 194
QP + TY ++ + K G A + +M E I+P ++ T ++ +C +
Sbjct: 211 QPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGR 270
Query: 195 IDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQN 254
EA L +M PDV TY+ LI A V +F E LY +M R + P+T+T +
Sbjct: 271 WSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYS 330
Query: 255 IVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRN 314
++ G+ K D E + ++ + C PD+ T NT+++ + +VD + +
Sbjct: 331 SMIDGFCKQNRLDAAEHMFY-LMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTE 389
Query: 315 FGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKH 374
G+ T T+ LI + + + +++ M T N +++ D G K
Sbjct: 390 AGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKD 449
Query: 375 MEYTFEQMHAE-----------GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
F+ M G++ D +T+ LI+G N G F + I
Sbjct: 450 ALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV 509
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ YN+VI K L E +++ M K P+ TF+ + Y K G D
Sbjct: 510 PDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVD 564
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 167/385 (43%), Gaps = 37/385 (9%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A +VFE + ++ +P TY L+ L ++G+ E A ++ EMVE+G +P+ YT L
Sbjct: 247 EAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVL 306
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A C + D+A L++M T C P+V+TY+ LI + E +++ M +
Sbjct: 307 IKAKCDIGMTDKAMKMLDEMAT-KACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG 365
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV------------------- 286
+ P +T N ++ GY K G ++LS ++E CKP++
Sbjct: 366 LCPGIITFNALINGYCKEGWVVSAFQLLS-VMEKGNCKPNIRTYNELMEGLCRVSKSYKA 424
Query: 287 ----------------WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
T N ++ F +GQ++M + + G++P+ TF LI
Sbjct: 425 FLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDG 484
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
K ++ + ++ M K T+ +I+ +G AK + + FE M
Sbjct: 485 LCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTT 544
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
TF C ++ ++ + + K + +V + +I +A + ++ +
Sbjct: 545 AHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLE 604
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEG 475
RMK+ C P+ T++I+ G
Sbjct: 605 RMKQAGCSPNVYTYTIIINGLCNNG 629
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 138/329 (41%), Gaps = 1/329 (0%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y ++ L K+G + A +++ G + T+L+ A CR + EAF +M
Sbjct: 197 YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMS 256
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
NC+P+ TYS LI +A R E L Q+M E+ P+T T +++ GM
Sbjct: 257 KEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMT 316
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
D+ ++L M A C P+V T ++ +G+++ + K G+ P TFN
Sbjct: 317 DKAMKMLDEMATKA-CVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNA 375
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
LI Y K+ ++ M K TYN ++E + + ++ G
Sbjct: 376 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 435
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+ D T+ L++G+ G + + + + + + A+I K L +
Sbjct: 436 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQAN 495
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ M +K D TF+ + + + K G
Sbjct: 496 GILGSMVKKGISLDEVTFTALIDGHCKIG 524
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 148/366 (40%), Gaps = 37/366 (10%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L + G+ E A VF +M++ G+ P + AL+ YC+ + AF
Sbjct: 333 PNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQL 392
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L+ M+ NC+P++ TY+ L++ + L + + + + P+ VT NI++ G+
Sbjct: 393 LSVMEK-GNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFC 451
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE- 320
K G + + + M SA +PD +T ++ G+++ GI +
Sbjct: 452 KEGQLNMAFNIFNSM-NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDE 510
Query: 321 ----------------------------------TRTFNILIGAYGKKRMYDKMSSVMEY 346
TFN + A GK ++ ++++
Sbjct: 511 VTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGK 570
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M K + T+ +IE G+ E+M G + T+ +ING N G
Sbjct: 571 MMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGR 630
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ + + S ++ N Y ++ A +KA L ++ M + C+P+S +S
Sbjct: 631 VEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSA 690
Query: 467 MTEAYA 472
+ +
Sbjct: 691 LLSGFV 696
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 126/319 (39%), Gaps = 10/319 (3%)
Query: 121 KKQW----FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIE 176
K+ W FQ L V E + +P TY +L+ L + + A + +V+ G+
Sbjct: 382 KEGWVVSAFQLLSVME----KGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLL 437
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
P Y L+ +C+ ++ AF N M + +PD +T++ LI R E
Sbjct: 438 PDRVTYNILVDGFCKEGQLNMAFNIFNSMNS-AGLEPDGFTFTALIDGLCKLGRLEQANG 496
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
+ M ++ ++ + VT ++ G+ K G + + M+E+ C T N L
Sbjct: 497 ILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVEN-RCLTTAHTFNCFLDAL 555
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
+++ K +G+ P T ILI + + ++E M++
Sbjct: 556 GKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNV 615
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
TY +I + G + E M + G+ + T+ L+ + AG + V
Sbjct: 616 YTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVST 675
Query: 417 ASKLQIAENVSFYNAVISA 435
K N Y+A++S
Sbjct: 676 MVKNGCQPNSHIYSALLSG 694
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 177/420 (42%), Gaps = 56/420 (13%)
Query: 119 VLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPT 178
V + W +AL FE L P +L +LG++ Q +A +VF EG T
Sbjct: 165 VGESSWRRALDAFEWLARST--APASRAVAVVLGVLGRARQDSIAEEVFLRFAGEG--AT 220
Query: 179 PELYTALLAAYCRNSLIDEA------------------FVTLNQMKTLPNC--------- 211
+++ A++ Y R+ D+A F TL ++ C
Sbjct: 221 VQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDL 280
Query: 212 ---------QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGK 262
+PDV TY+TLI AC + E T++++M P+ T N ++ +G+
Sbjct: 281 LFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGR 340
Query: 263 AGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETR 322
G ++ ER+ ++E PD T N++L FA +G VD +E E+ G
Sbjct: 341 CGKAEEAERLFGELVEKGF-MPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEI 399
Query: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
T+N +I YGK D + + MR + + TY +I++ M E M
Sbjct: 400 TYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDM 459
Query: 383 HAEGMKADTKTFCCLINGYANAG-------LFHKVISSVRLASKLQIAENVSFYNAVISA 435
G+K F LI YA G F +I+S +L Y ++
Sbjct: 460 ADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLA-------YLVMLDV 512
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
++ + +M R+Y+ M + RPD + + ++ A AKE +++ + Q+ +++L + S
Sbjct: 513 FARSGETEKMLRLYRTMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEIIQD-MELLCQMS 571
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/426 (21%), Positives = 161/426 (37%), Gaps = 58/426 (13%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A ++F L E+ F P TY LL K G + E+V+ G + Y +
Sbjct: 346 EAERLFGELVEKGF-MPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTM 404
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ Y + +D A ++M+ + C PD TY+ +I + + + +DM +
Sbjct: 405 IHMYGKMGRLDLAVGLYDEMRAV-GCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAG 463
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P V + ++ Y K G E+ M+ S KPD +L VFA G+ + M
Sbjct: 464 LKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGV-KPDRLAYLVMLDVFARSGETEKM 522
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
R Y N P+ + +L+ A K+ +++ +++ M L +I+A
Sbjct: 523 LRLYRTMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEIIQDMELLCQMSLGVISTILIKA 582
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA-----NAGLF------HKVISSV 414
K ++ Q G K D K+ ++N Y GL V SS
Sbjct: 583 RCVSQGGKLLKKACLQ----GYKPDAKSLWSIMNAYVMTEKHEEGLSLLECIRDHVSSSQ 638
Query: 415 RLASKLQI-------------------------AENVSFYNAVISACIKADDLMEMERVY 449
L S+ I +N + Y +I+ ++A+ E +V+
Sbjct: 639 DLISECSIILLCRKQTSISAYEQYSQRLMLKYPGQNCNLYEHLITCLVEAELFSEACQVF 698
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ------------MLLEASGH 497
M+ + + Y K G + + L + LQ +++EA G+
Sbjct: 699 CDMQFIGIEASKNIYESIISTYCKLGFPETAHGLMDDALQSGIPLNILSCRVIIIEAYGN 758
Query: 498 ---WQQ 500
WQQ
Sbjct: 759 IKLWQQ 764
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 99/211 (46%), Gaps = 4/211 (1%)
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
L + EM E ++P + LL + +G + +V+ ++E G+EP + Y L+
Sbjct: 906 LMIAEM--EGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIV 963
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVT 247
YCR+ +E F LN+M P + +Y +L+ A A E + L+++M +S
Sbjct: 964 MYCRSLRPEEGFTLLNEMGK-RGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQ 1022
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMER 307
N ++++ Y AG + E +L+ M E +P + TM+ +++ + GQ E
Sbjct: 1023 LNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGI-EPTIATMHILMTSYGTAGQPHEAEN 1081
Query: 308 WYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
++ ++ T ++ + AY K YD
Sbjct: 1082 VLNSLKSSSLEVSTLPYSTVFDAYLKNGDYD 1112
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 144/329 (43%), Gaps = 12/329 (3%)
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
+SG E AR VF+ M++ G PT + ++ A + +DE +V + +++ + D
Sbjct: 791 AESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVGELQDM-----D 845
Query: 215 VYTYSTLIKACVDAMR-----FELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+ + +DA FE+++ +Y M PN + F +
Sbjct: 846 FKISKSTVLLMLDAFAKAGDVFEVMK-IYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDV 904
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
E +++ M E A KPD+ N++L+++ G D + Y+ G++P+ T+N LI
Sbjct: 905 ELMIAEM-EGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIV 963
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
Y + ++ +++ M K +Y +++ A + + + FE+M ++ +
Sbjct: 964 MYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQL 1023
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
+ + ++ Y NAG K + + + + I ++ + ++++ A E E V
Sbjct: 1024 NRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVL 1083
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+K + +S + +AY K G D
Sbjct: 1084 NSLKSSSLEVSTLPYSTVFDAYLKNGDYD 1112
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 134/334 (40%), Gaps = 43/334 (12%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
++ + T + +L K+G K++N M G P LY ++ + C ++
Sbjct: 846 FKISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHN------ 899
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
RF +E + +M+ P+ N +L
Sbjct: 900 ------------------------------RFRDVELMIAEMEGAGFKPDLSIFNSLLNM 929
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
Y AG FD+ +V +LE A +PD T NT++ ++ + + + G+ P
Sbjct: 930 YTAAGNFDRTTQVYQSILE-AGLEPDEDTYNTLIVMYCRSLRPEEGFTLLNEMGKRGLTP 988
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ +++ L+ A K + ++ + E MR + S Y+ +++ + + G+ E
Sbjct: 989 KLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLL 1048
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHK---VISSVRLASKLQIAENVSFYNAVISAC 436
M +G++ T L+ Y AG H+ V++S++ +S L+++ Y+ V A
Sbjct: 1049 AVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLK-SSSLEVS--TLPYSTVFDAY 1105
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
+K D + MK PD + ++ A
Sbjct: 1106 LKNGDYDLGIKKLLEMKRDGVEPDHQVWTCFIRA 1139
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/312 (16%), Positives = 122/312 (39%), Gaps = 39/312 (12%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A +VF +M GIE + +Y ++++ YC+ + A
Sbjct: 694 ACQVFCDMQFIGIEASKNIYESIISTYCKLGFPETA------------------------ 729
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVT-QNIVLGGYGKAGMFDQMERVLSGMLESAT 281
L D + + N ++ + I++ YG ++ Q E ++ G+ +++
Sbjct: 730 ------------HGLMDDALQSGIPLNILSCRVIIIEAYGNIKLWQQAEILVKGLRQASG 777
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
+W N ++ +A G + ++ G P + N ++ A D++
Sbjct: 778 IDRRIW--NALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELY 835
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
V+ ++ + F + ST +++AF+ GD + + M A G + + + +
Sbjct: 836 VVVGELQDMDFKISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLL 895
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
+ F V + ++S +N++++ A + +VY+ + E PD
Sbjct: 896 CHHNRFRDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDE 955
Query: 462 ETFSIMTEAYAK 473
+T++ + Y +
Sbjct: 956 DTYNTLIVMYCR 967
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 111/305 (36%), Gaps = 3/305 (0%)
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
CR A+ +Q L + Y LI V+A F ++ DM + +
Sbjct: 650 CRKQTSISAYEQYSQRLMLKYPGQNCNLYEHLITCLVEAELFSEACQVFCDMQFIGIEAS 709
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
++ Y K G + ++ L+S + I+ + N E
Sbjct: 710 KNIYESIISTYCKLGFPETAHGLMDDALQSGIPLNILSCRVIIIEAYGNIKLWQQAEILV 769
Query: 310 EKFRNF-GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD 368
+ R GID R +N LI AY + +Y+K +V + M K T + N ++ A
Sbjct: 770 KGLRQASGID--RRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIV 827
Query: 369 MGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSF 428
G + ++ K T +++ +A AG +V+ N+
Sbjct: 828 DGRLDELYVVVGELQDMDFKISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHL 887
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
Y ++ S + ++E + M+ +PD F+ + Y G D+ + Q L
Sbjct: 888 YRSMTSLLCHHNRFRDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSIL 947
Query: 489 QMLLE 493
+ LE
Sbjct: 948 EAGLE 952
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 159/382 (41%), Gaps = 37/382 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNS-------- 193
P T+ ++ L G+ A +V +EM +G P P +Y +L A CR+
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 194 ---------------------------LIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
+DEA L ++ C+ D+ +Y+ ++K
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFF-GCEADIVSYNAVLKGLC 227
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
A R+ +E L +M PN VT N ++G + G+F+++ VL+ M E C PD+
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG-CTPDI 286
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
TI+ +G +++ + ++G+ P +N ++ + + ++
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M + P T+N +++ F G + EQM + G D T+ +ING+ GL
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL 406
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ + ++ S N Y V+ A ++ E + +M ++ C P+ TF+
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNT 466
Query: 467 MTEAYAKEGMNDKVYALEQEKL 488
+ K+G+ ++ L ++ L
Sbjct: 467 LINFLCKKGLVEQAIELLKQML 488
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 152/338 (44%), Gaps = 2/338 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ L ++G E +V +M E G P +Y ++ C+ ++ A
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
LN+M + +P+V Y+T++K A R++ E L +M ++ + VT NI++ +
Sbjct: 309 LNRMPSY-GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFC 367
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G+ D++ +L ML S C PDV T T+++ F +G +D + + G P T
Sbjct: 368 QNGLVDRVIELLEQML-SHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
++ I++ + +M M + P T+N +I G + +Q
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G D ++ +I+G AG + + + + I+ N Y+++ A +
Sbjct: 487 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGR 546
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ ++ +++ +K+ R D+ ++ + + K D+
Sbjct: 547 VNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDR 584
>gi|356554513|ref|XP_003545590.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Glycine max]
Length = 632
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 157/360 (43%), Gaps = 1/360 (0%)
Query: 114 TFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE 173
T + + +++F+ + L E+ +P + L+ +SG E A+KV +M E
Sbjct: 112 TLLNALTTQKYFKPIHSIVSLVEEKQMKPDSIFFNALINAFAESGNMEDAKKVVQKMKES 171
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
G++P+ Y L+ Y DE+ L+ M T N +P++ TY+ LI+A
Sbjct: 172 GLKPSACTYNTLIKGYGIAGKPDESMKLLDLMSTEGNVKPNLKTYNMLIRALCKMENISE 231
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
+ M + P+ VT N + Y + G Q E ++ M + + KP+ T I+
Sbjct: 232 AWNVVYKMTASGMQPDVVTFNTIATAYAQNGKTAQAEAMILEM-QRNSLKPNERTCTIII 290
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
S + +G+V R+ + ++ G+ P N L+ + D + V++ M + Q
Sbjct: 291 SGYCREGKVQEALRFVYRMKDLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIR 350
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
TY+ ++ A+S G + + + M G+K D + L GY A K
Sbjct: 351 PDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEKAEEM 410
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ + +K + NV + VIS + RV+ +M E P+ +TF + YA+
Sbjct: 411 LTVMTKSGVHPNVVIFTTVISGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFETLIWGYAE 470
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 155/346 (44%), Gaps = 13/346 (3%)
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLID--EAFVTLNQMK 206
K++ +L KSG+P+ A +F ++E G +P+ YT LL A + V+L + K
Sbjct: 77 KVMNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEEK 136
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
+ +PD ++ LI A ++ E + + Q M E + P+ T N ++ GYG AG
Sbjct: 137 QM---KPDSIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKP 193
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
D+ ++L M KP++ T N ++ + K G+ P+ TFN
Sbjct: 194 DESMKLLDLMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNT 253
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
+ AY + + +++ M++ T +I + G + +M G
Sbjct: 254 IATAYAQNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMKDLG 313
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
M+ + L+NG+ + V ++L + QI +V Y+ +++A +A L + +
Sbjct: 314 MQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGFLEKCK 373
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLL 492
+Y M + +PD+ +SI+ + Y V A E EK + +L
Sbjct: 374 EIYNNMLKSGVKPDAHAYSILAKGY--------VRAQEMEKAEEML 411
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
F+ + G + T+ L+N F + S V L + Q+ + F+NA+I+A +
Sbjct: 95 FQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEEKQMKPDSIFFNALINAFAE 154
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGHW 498
+ ++ + ++V ++MKE +P + T++ + + Y G D E KL L+ G+
Sbjct: 155 SGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPD-----ESMKLLDLMSTEGNV 209
Query: 499 QQNI 502
+ N+
Sbjct: 210 KPNL 213
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
E A ++ M + G+ P ++T +++ +C +D A ++M P++ T+ T
Sbjct: 405 EKAEEMLTVMTKSGVHPNVVIFTTVISGWCSVGRMDNAMRVFDKMGEF-GVSPNLKTFET 463
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
LI +A + E + Q M+E V P T +V + AG ++ + +L
Sbjct: 464 LIWGYAEAKQPWKAEGMLQIMEEFHVQPKKSTILLVAEAWRFAGFKERAKTLL 516
>gi|297808179|ref|XP_002871973.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317810|gb|EFH48232.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 831
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 152/334 (45%), Gaps = 6/334 (1%)
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
KL+ L + G+P+ A +FN ++EEG +P+ YT L+ A R +++++
Sbjct: 324 KLMNGLIERGRPQEAHSIFNTLIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVQK- 382
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
+PD ++ +I A ++ + +++ M E P T N ++ GYGK G ++
Sbjct: 383 NGLRPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEE 442
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
R+L ML +P+ T N ++ + N+ +++ K ++FG+ P+ TFN L
Sbjct: 443 SSRLLEMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSFGVKPDAVTFNTLA 502
Query: 329 GAY---GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
AY G + M ++ M + T ++ + + G + F +M
Sbjct: 503 RAYSRIGSTCTAEDM--IIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKEL 560
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G+ + F LI G+ N V V L + + +V ++ +++A D+
Sbjct: 561 GVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRC 620
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
E +Y+ M E PD FSI+ + YA+ G +K
Sbjct: 621 EEIYRDMLEGGIDPDIHAFSILAKGYARAGEPEK 654
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 134/298 (44%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
+SG + A K+F +M E G +PT + L+ Y + ++E+ L M QP+
Sbjct: 401 ESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLEMMLRDEMLQPND 460
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
T + L++A + + E + M V P+ VT N + Y + G E ++
Sbjct: 461 RTCNILVQAWCNQRKIEEAWNIVYKMQSFGVKPDAVTFNTLARAYSRIGSTCTAEDMIIP 520
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
+ KP+V T TI++ + +G+++ R++ + + G+ P FN LI +
Sbjct: 521 RMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIN 580
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
D + V++ M + T++ ++ A+S +GD K E + M G+ D F
Sbjct: 581 DMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYRDMLEGGIDPDIHAFS 640
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
L GYA AG K + K + NV Y +IS A ++ + +VY +M+
Sbjct: 641 ILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYNKMR 698
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 60/110 (54%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
++G+PE A ++ N+M + G+ P +YT +++ +C + +A N+M+ P++
Sbjct: 648 RAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYNKMRGSVGLSPNL 707
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
TY TLI +A + E L ++M+E++V P T ++ G+ G+
Sbjct: 708 TTYETLIWGFGEAKQPWKAEELLKEMEEKNVVPTRKTMQLIADGWKSIGV 757
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 78/199 (39%), Gaps = 2/199 (1%)
Query: 103 KAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPEL 162
K K V T + + + + +AL+ F +KE + P + L+ +
Sbjct: 526 KVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVH-PNLFVFNSLIKGFLNINDMDG 584
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
+V + M E G++P ++ L+ A+ + M PD++ +S L
Sbjct: 585 VGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYRDMLE-GGIDPDIHAFSILA 643
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
K A E E + M + V PN V ++ G+ AG + +V + M S
Sbjct: 644 KGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYNKMRGSVGL 703
Query: 283 KPDVWTMNTILSVFANKGQ 301
P++ T T++ F Q
Sbjct: 704 SPNLTTYETLIWGFGEAKQ 722
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 167/385 (43%), Gaps = 37/385 (9%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A +VFE + ++ +P TY L+ L ++G+ E A ++ EMVE+G +P+ YT L
Sbjct: 224 EAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVL 283
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A C + D+A L++M T C P+V+TY+ LI + E +++ M +
Sbjct: 284 IKAKCDIGMTDKAMKMLDEMAT-KACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG 342
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV------------------- 286
+ P +T N ++ GY K G ++LS ++E CKP++
Sbjct: 343 LCPGIITFNALINGYCKEGWVVSAFQLLS-VMEKGNCKPNIRTYNELMEGLCRVSKSYKA 401
Query: 287 ----------------WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
T N ++ F +GQ++M + + G++P+ TF LI
Sbjct: 402 FLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDG 461
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
K ++ + ++ M K T+ +I+ +G AK + + FE M
Sbjct: 462 LCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTT 521
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
TF C ++ ++ + + K + +V + +I +A + ++ +
Sbjct: 522 AHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLE 581
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEG 475
RMK+ C P+ T++I+ G
Sbjct: 582 RMKQAGCSPNVYTYTIIINGLCNNG 606
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 138/329 (41%), Gaps = 1/329 (0%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y ++ L K+G + A +++ G + T+L+ A CR + EAF +M
Sbjct: 174 YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMS 233
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
NC+P+ TYS LI +A R E L Q+M E+ P+T T +++ GM
Sbjct: 234 KEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMT 293
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
D+ ++L M A C P+V T ++ +G+++ + K G+ P TFN
Sbjct: 294 DKAMKMLDEMATKA-CVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNA 352
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
LI Y K+ ++ M K TYN ++E + + ++ G
Sbjct: 353 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 412
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+ D T+ L++G+ G + + + + + + A+I K L +
Sbjct: 413 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQAN 472
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ M +K D TF+ + + + K G
Sbjct: 473 GILGSMVKKGISLDEVTFTALIDGHCKIG 501
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 148/366 (40%), Gaps = 37/366 (10%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L + G+ E A VF +M++ G+ P + AL+ YC+ + AF
Sbjct: 310 PNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQL 369
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L+ M+ NC+P++ TY+ L++ + L + + + + P+ VT NI++ G+
Sbjct: 370 LSVMEK-GNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFC 428
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE- 320
K G + + + M SA +PD +T ++ G+++ GI +
Sbjct: 429 KEGQLNMAFNIFNSM-NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDE 487
Query: 321 ----------------------------------TRTFNILIGAYGKKRMYDKMSSVMEY 346
TFN + A GK ++ ++++
Sbjct: 488 VTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGK 547
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M K + T+ +IE G+ E+M G + T+ +ING N G
Sbjct: 548 MMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGR 607
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ + + S ++ N Y ++ A +KA L ++ M + C+P+S +S
Sbjct: 608 VEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSA 667
Query: 467 MTEAYA 472
+ +
Sbjct: 668 LLSGFV 673
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 126/319 (39%), Gaps = 10/319 (3%)
Query: 121 KKQW----FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIE 176
K+ W FQ L V E + +P TY +L+ L + + A + +V+ G+
Sbjct: 359 KEGWVVSAFQLLSVME----KGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLL 414
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
P Y L+ +C+ ++ AF N M + +PD +T++ LI R E
Sbjct: 415 PDRVTYNILVDGFCKEGQLNMAFNIFNSMNS-AGLEPDGFTFTALIDGLCKLGRLEQANG 473
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
+ M ++ ++ + VT ++ G+ K G + + M+E+ C T N L
Sbjct: 474 ILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVEN-RCLTTAHTFNCFLDAL 532
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
+++ K +G+ P T ILI + + ++E M++
Sbjct: 533 GKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNV 592
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
TY +I + G + E M + G+ + T+ L+ + AG + V
Sbjct: 593 YTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVST 652
Query: 417 ASKLQIAENVSFYNAVISA 435
K N Y+A++S
Sbjct: 653 MVKNGCQPNSHIYSALLSG 671
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 161/340 (47%), Gaps = 8/340 (2%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL L K G+ A +V +V G+ PT +Y L+ YC+ + AF QMK+
Sbjct: 340 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKS-R 398
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+ +PD TY+ LI E L +M++ V P+ T N ++ YG AG ++
Sbjct: 399 HIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC 458
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
VLS M + K DV + +++ F G++ + + P + +N +I
Sbjct: 459 FTVLSDMQQKGI-KSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIID 517
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF---SDMGDAKHMEYTFEQMHAEG 386
AY + ++ ++E M+ + TYN +++ S + +A+ + YT +G
Sbjct: 518 AYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRN---QG 574
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
++ D ++ +I+ N G K + ++ +K I + Y+ ++SA A + +ME
Sbjct: 575 LRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDME 634
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+Y++M K+ P S + IM +AY + + KV +L++E
Sbjct: 635 CLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKE 674
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 118/259 (45%), Gaps = 11/259 (4%)
Query: 117 DHVLKKQWFQALQVFEMLK---------EQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
DH+ L EM+ E+ P T+ L+ G +GQ E V
Sbjct: 403 DHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVL 462
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
++M ++GI+ + +++ A+C+N I EA L+ M + P+ Y+++I A ++
Sbjct: 463 SDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDM-IYKDVAPNAQVYNSIIDAYIE 521
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
+ E L + M V+ + VT N++L G ++ D+ E ++ L + +PDV
Sbjct: 522 SGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIY-TLRNQGLRPDVV 580
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
+ NTI+S NKG D ++ +GI P RT++ L+ A M + + M
Sbjct: 581 SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQM 640
Query: 348 RKLQFPWTSSTYNNVIEAF 366
+SS Y +++A+
Sbjct: 641 LHKNVEPSSSIYGIMVDAY 659
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 123/275 (44%), Gaps = 3/275 (1%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A +FE +K + +P TY L+ L K A + EM + G++P+ E + L+
Sbjct: 388 AFCIFEQMKSR-HIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLI 446
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
AY +++ F L+ M+ + DV ++ +++KA + + DM + V
Sbjct: 447 DAYGTAGQLEKCFTVLSDMQQ-KGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDV 505
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PN N ++ Y ++G +Q ++ M S + T N +L Q+D E
Sbjct: 506 APNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGV-SASIVTYNLLLKGLCRSSQIDEAE 564
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
RN G+ P+ ++N +I A K DK +++ M K T TY+ ++ A
Sbjct: 565 ELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSAL 624
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+ G ME ++QM + ++ + + +++ Y
Sbjct: 625 ASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAY 659
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 132/321 (41%), Gaps = 4/321 (1%)
Query: 157 SGQPELARKVFNEMVEEGIEPTPEL--YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
+G ++A + M P P+ Y ++A R+ +A ++M + P+
Sbjct: 170 AGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDM-GVVPN 228
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
TY+T+I V E L M PN VT N++L G +AG D+ RVL
Sbjct: 229 WITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDE-TRVLM 287
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
+ S + PD +T + + G+ M + + G+ T +IL+ K
Sbjct: 288 DEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKD 347
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
K V+E + T+ YN +I + + D + FEQM + ++ D T+
Sbjct: 348 GKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITY 407
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
LING + K V K + +V +N +I A A L + V M++
Sbjct: 408 NALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQ 467
Query: 455 KHCRPDSETFSIMTEAYAKEG 475
K + D +F + +A+ K G
Sbjct: 468 KGIKSDVISFGSVVKAFCKNG 488
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 124/287 (43%), Gaps = 8/287 (2%)
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDM--DERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+PD + ++ +++ACV A ++ + + M E + P+ + N+V+ G ++G
Sbjct: 154 RPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDA 213
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+V M++ P+ T NT++ G ++ R ++ + G P T+N+L+
Sbjct: 214 LKVFDEMVDMGVV-PNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLS 272
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+ D+ +M+ M TY+ + + + G+++ M F + +G+
Sbjct: 273 GLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVML 332
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
T L+NG G K + + + YN +I+ + DL ++
Sbjct: 333 GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIF 392
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
++MK +H RPD T++ + K M K E L M +E SG
Sbjct: 393 EQMKSRHIRPDHITYNALINGLCKLEMVTKA-----EDLVMEMEKSG 434
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 2/137 (1%)
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF-RNFGI-DPETRTFNILI 328
R G+L +A +PD + N ++ G +D+ + R+ G P+ ++N++I
Sbjct: 142 RAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVI 201
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
+ V + M + TYN +I+ GD + +QM +G K
Sbjct: 202 AGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPK 261
Query: 389 ADTKTFCCLINGYANAG 405
+ T+ L++G AG
Sbjct: 262 PNIVTYNVLLSGLCRAG 278
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 167/385 (43%), Gaps = 37/385 (9%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A +VFE + ++ +P TY L+ L ++G+ E A ++ EMVE+G +P+ YT L
Sbjct: 181 EAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVL 240
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A C + D+A L++M T C P+V+TY+ LI + E +++ M +
Sbjct: 241 IKAKCDIGMTDKAMKMLDEMAT-KACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG 299
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV------------------- 286
+ P +T N ++ GY K G ++LS ++E CKP++
Sbjct: 300 LCPGIITFNALINGYCKEGWVVSAFQLLS-VMEKGNCKPNIRTYNELMEGLCRVSKSYKA 358
Query: 287 ----------------WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
T N ++ F +GQ++M + + G++P+ TF LI
Sbjct: 359 FLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDG 418
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
K ++ + ++ M K T+ +I+ +G AK + + FE M
Sbjct: 419 LCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTT 478
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
TF C ++ ++ + + K + +V + +I +A + ++ +
Sbjct: 479 AHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLE 538
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEG 475
RMK+ C P+ T++I+ G
Sbjct: 539 RMKQAGCSPNVYTYTIIINGLCNNG 563
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 138/329 (41%), Gaps = 1/329 (0%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y ++ L K+G + A +++ G + T+L+ A CR + EAF +M
Sbjct: 131 YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMS 190
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
+C+P+ TYS LI +A R E L Q+M E+ P+T T +++ GM
Sbjct: 191 KEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMT 250
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
D+ ++L M A C P+V T ++ +G+++ + K G+ P TFN
Sbjct: 251 DKAMKMLDEMATKA-CVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNA 309
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
LI Y K+ ++ M K TYN ++E + + ++ G
Sbjct: 310 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 369
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+ D T+ L++G+ G + + + + + + A+I K L +
Sbjct: 370 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQAN 429
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ M +K D TF+ + + + K G
Sbjct: 430 GILGSMVKKGISLDEVTFTALIDGHCKIG 458
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 148/366 (40%), Gaps = 37/366 (10%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L + G+ E A VF +M++ G+ P + AL+ YC+ + AF
Sbjct: 267 PNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQL 326
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L+ M+ NC+P++ TY+ L++ + L + + + + P+ VT NI++ G+
Sbjct: 327 LSVMEK-GNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFC 385
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE- 320
K G + + + M SA +PD +T ++ G+++ GI +
Sbjct: 386 KEGQLNMAFNIFNSM-NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDE 444
Query: 321 ----------------------------------TRTFNILIGAYGKKRMYDKMSSVMEY 346
TFN + A GK ++ ++++
Sbjct: 445 VTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGK 504
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M K + T+ +IE G+ E+M G + T+ +ING N G
Sbjct: 505 MMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGR 564
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ + + S ++ N Y ++ A +KA L ++ M + C+P+S +S
Sbjct: 565 VEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSA 624
Query: 467 MTEAYA 472
+ +
Sbjct: 625 LLSGFV 630
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 126/319 (39%), Gaps = 10/319 (3%)
Query: 121 KKQW----FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIE 176
K+ W FQ L V E + +P TY +L+ L + + A + +V+ G+
Sbjct: 316 KEGWVVSAFQLLSVME----KGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLL 371
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
P Y L+ +C+ ++ AF N M + +PD +T++ LI R E
Sbjct: 372 PDRVTYNILVDGFCKEGQLNMAFNIFNSMNS-AGLEPDGFTFTALIDGLCKLGRLEQANG 430
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
+ M ++ ++ + VT ++ G+ K G + + M+E+ C T N L
Sbjct: 431 ILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVEN-RCLTTAHTFNCFLDAL 489
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
+++ K +G+ P T ILI + + ++E M++
Sbjct: 490 GKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNV 549
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
TY +I + G + E M + G+ + T+ L+ + AG + V
Sbjct: 550 YTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVST 609
Query: 417 ASKLQIAENVSFYNAVISA 435
K N Y+A++S
Sbjct: 610 MVKNGCQPNSHIYSALLSG 628
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 165/364 (45%), Gaps = 5/364 (1%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A ++F+ + Q P ++ L+ LL K+G + A K F +M G+ P +YT L+
Sbjct: 378 AERIFDEMPSQGVV-PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILI 436
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERS 245
+CRN ++ EA ++M C DV TY+T++ C + M E E L+ +M ER
Sbjct: 437 GGFCRNGVMSEALKVRDEMLE-QGCVLDVVTYNTILNGLCKEKMLSEADE-LFTEMTERG 494
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
V P+ T ++ GY K G ++ + M++ KPDV T NT++ F +++ +
Sbjct: 495 VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQR-NLKPDVVTYNTLIDGFCKGSEMEKV 553
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ + I P ++ ILI Y + + + M + F T T N +++
Sbjct: 554 NELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 613
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ G+A + M +G+ D T+ LING+ + + V + +
Sbjct: 614 YCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPD 673
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
V YN +++ + + E E + +M E+ PD T++ + + + + + +
Sbjct: 674 VITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHD 733
Query: 486 EKLQ 489
E LQ
Sbjct: 734 EMLQ 737
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 156/342 (45%), Gaps = 2/342 (0%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L K+ + E + ++M E+G+ P Y L+ AYCR L++EAF ++ M +P
Sbjct: 264 LCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSG-KGLKP 322
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
V+TY+ +I ++ + + +M + ++P+T T NI+L + ER+
Sbjct: 323 CVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIF 382
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
M S PD+ + + ++ + + G +D +++ +N G+ P+ + ILIG + +
Sbjct: 383 DEM-PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCR 441
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+ + V + M + TYN ++ + F +M G+ D T
Sbjct: 442 NGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYT 501
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
F LINGY+ G +K ++ + + + +V YN +I K ++ ++ ++ M
Sbjct: 502 FTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMI 561
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
+ P+ ++ I+ Y G + + L E ++ EA+
Sbjct: 562 SRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEAT 603
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 160/352 (45%), Gaps = 20/352 (5%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY ++ L K+G+ A+ V +EM++ G+ P Y LL CRN + +A
Sbjct: 321 KPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAER 380
Query: 201 TLNQMKTLPNCQPDVYTYSTLI-----KACVD-AMRFELIETLYQDMDERSVTPNTVTQN 254
++M + PD+ ++S LI C+D A+++ ++DM + P+ V
Sbjct: 381 IFDEMPS-QGVVPDLVSFSALIGLLSKNGCLDQALKY------FRDMKNAGLAPDNVIYT 433
Query: 255 IVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRN 314
I++GG+ + G+ + +V MLE C DV T NTIL+ + + + + +
Sbjct: 434 ILIGGFCRNGVMSEALKVRDEMLEQG-CVLDVVTYNTILNGLCKEKMLSEADELFTEMTE 492
Query: 315 FGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKH 374
G+ P+ TF LI Y K +K ++ E M + TYN +I+ F + +
Sbjct: 493 RGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEK 552
Query: 375 MEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL---QIAENVSFYNA 431
+ + M + + + ++ LINGY N G V + RL ++ + N
Sbjct: 553 VNELWNDMISRRIYPNHISYGILINGYCNMGC---VSEAFRLWDEMVEKGFEATIITCNT 609
Query: 432 VISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
++ +A + ++ + M K PD T++ + + KE D+ +AL
Sbjct: 610 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFAL 661
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 115/281 (40%), Gaps = 35/281 (12%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY +L L K A ++F EM E G+ P +T L+ Y ++ +++A VTL +M
Sbjct: 466 TYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKA-VTLFEM 524
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
N +PDV TY+TLI E + L+ DM R + PN ++ I++ GY G
Sbjct: 525 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 584
Query: 266 FDQMERVLSGMLESA------TCK----------------------------PDVWTMNT 291
+ R+ M+E TC PD T NT
Sbjct: 585 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 644
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
+++ F + +D K N G+ P+ T+N+++ + ++ + +M M +
Sbjct: 645 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 704
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
STY ++I + K ++M G D K
Sbjct: 705 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 745
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 122/298 (40%), Gaps = 2/298 (0%)
Query: 179 PELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
P ++ L+ Y + + E +K+ C + ++L+ V +L +Y
Sbjct: 184 PLVFDLLVRTYVQARKLREGCEAFRVLKSKGLC-VSINACNSLLGGLVKVGWVDLAWEIY 242
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
Q++ V N T NI++ K + + LS M E PDV T NT+++ +
Sbjct: 243 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVF-PDVVTYNTLINAYCR 301
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
+G ++ + G+ P T+N +I K Y + V++ M K+ ++T
Sbjct: 302 QGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTAT 361
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN ++ + E F++M ++G+ D +F LI + G + + R
Sbjct: 362 YNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMK 421
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+A + Y +I + + E +V M E+ C D T++ + KE M
Sbjct: 422 NAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 479
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 163/370 (44%), Gaps = 14/370 (3%)
Query: 119 VLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPT 178
V + W +AL FE L P +L +LG++ Q +A +VF EG T
Sbjct: 165 VGESSWRRALDAFEWLARSS--APASRAVAVVLGVLGRARQDSIAEEVFLRFAGEG--AT 220
Query: 179 PELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-----CVDAMRFEL 233
+++ A++ Y R+ D+A L+ M PD+ +++TLI A C+ A +
Sbjct: 221 VQVFNAMMGVYARSGRFDDARQLLDTMHD-RGIDPDLVSFNTLINARSKSGCLAA---GV 276
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
L ++ + + P+ +T N ++ ++ + V M+ S C+PD+WT N ++
Sbjct: 277 ALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIAS-ECRPDLWTYNAMV 335
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
SV G+ + ER + + G P+ T+N L+ A+ K+ DK+ E + K F
Sbjct: 336 SVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFK 395
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
TYN +I + MG +++M A G D T+ +I+ +
Sbjct: 396 KNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKV 455
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ + + + ++A+I A K + E + M +PD + +M + +A+
Sbjct: 456 LEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFAR 515
Query: 474 EGMNDKVYAL 483
G +K+ L
Sbjct: 516 SGDTEKMLCL 525
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 140/321 (43%), Gaps = 2/321 (0%)
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
+SG E AR VF+ M++ G PT + ++ A + +DE +V + +++ + N +
Sbjct: 791 AESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDM-NFKIS 849
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
T L+ A A + +Y M PN ++ F +E +++
Sbjct: 850 KSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIA 909
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
M E A KPD+ +N +L+++ G D + Y G++P+ T+N LI Y +
Sbjct: 910 EM-EGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRS 968
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
++ +++ M K +Y +++ A + + + FE+M ++ + + +
Sbjct: 969 FRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIY 1028
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
++ Y NAG K + + + + I ++ + ++++ A E E V +K
Sbjct: 1029 HMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKS 1088
Query: 455 KHCRPDSETFSIMTEAYAKEG 475
+ +S + +AY K G
Sbjct: 1089 SSLEVSTLPYSTVFDAYLKNG 1109
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 127/308 (41%), Gaps = 10/308 (3%)
Query: 119 VLKKQWFQALQVFEMLK-----EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE 173
+L + +A VFE++K + Y P Y ++ LL + + EM
Sbjct: 855 LLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGA 914
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
G +P + ALL Y D + +PD TY+TLI + R E
Sbjct: 915 GFKPDLAILNALLNMYTAAGNFDRTTQVYRSILE-AGLEPDEDTYNTLIVMYCRSFRPEE 973
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
TL +M +R +TP + +L KA + +Q +++ M S + + + + ++
Sbjct: 974 GFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEM-RSKSYQLNRSIYHMMM 1032
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
++ N G E + GI+P T +IL+ +YG + +V+ ++
Sbjct: 1033 KIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLE 1092
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
++ Y+ V +A+ GD H +M +G++ D + + C I A L + +
Sbjct: 1093 VSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRA---ASLCEQTADA 1149
Query: 414 VRLASKLQ 421
+ L LQ
Sbjct: 1150 ILLLKSLQ 1157
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/312 (17%), Positives = 124/312 (39%), Gaps = 39/312 (12%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A +VF +M GIE + +Y ++++ YC+ + A
Sbjct: 694 ACQVFCDMQFIGIEASKSIYESIISTYCKLGFPETA------------------------ 729
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVT-QNIVLGGYGKAGMFDQMERVLSGMLESAT 281
L D + + N ++ + I++ YGK ++ Q E ++ G+ +++
Sbjct: 730 ------------HRLMDDALQSGIPLNILSCRVIIIEAYGKIKLWQQAEILVKGLRQASG 777
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
+W N ++ +A G + ++ G P + N ++ A D++
Sbjct: 778 IDRRIW--NALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELY 835
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
V+E ++ + F + ST +++AF+ GD + + M A G + + +I+
Sbjct: 836 VVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLL 895
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
+ F V + +++ NA+++ A + +VY+ + E PD
Sbjct: 896 CHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDE 955
Query: 462 ETFSIMTEAYAK 473
+T++ + Y +
Sbjct: 956 DTYNTLIVMYCR 967
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 79/176 (44%), Gaps = 10/176 (5%)
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P +R +++G G+ R V ++R T +N ++ ++ G
Sbjct: 186 PASRAVAVVLGVLGRARQDSIAEEV--FLRFAGEGATVQVFNAMMGVYARSGRFDDARQL 243
Query: 379 FEQMHAEGMKADTKTFCCLIN-----GYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
+ MH G+ D +F LIN G AG+ ++ VR + + +V YN +I
Sbjct: 244 LDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSG---LRPDVITYNTLI 300
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
SAC ++ +L + V++ M CRPD T++ M + + G ++ L +E ++
Sbjct: 301 SACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVE 356
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 115/307 (37%), Gaps = 7/307 (2%)
Query: 190 CRNSLIDEAFVTLNQ--MKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVT 247
CR A+ +Q M P ++Y Y LI ++A F ++ DM +
Sbjct: 650 CRKQTSISAYEQYSQRLMLKYPGQNCNLYEY--LITCLIEAEFFSEACQVFCDMQFIGIE 707
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMER 307
+ ++ Y K G + R++ L+S + I+ + E
Sbjct: 708 ASKSIYESIISTYCKLGFPETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIKLWQQAEI 767
Query: 308 WYEKFRNF-GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ R GID R +N LI AY + +Y+K +V + M K T + N ++ A
Sbjct: 768 LVKGLRQASGID--RRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRAL 825
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G + E++ K T L++ +A AG +V+ N+
Sbjct: 826 IVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNM 885
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
Y ++IS + ++E + M+ +PD + + Y G D+ + +
Sbjct: 886 HLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRS 945
Query: 487 KLQMLLE 493
L+ LE
Sbjct: 946 ILEAGLE 952
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 75/377 (19%), Positives = 148/377 (39%), Gaps = 54/377 (14%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P Y+ +L + +SG E ++ +M+ + P ++Y LL A + +E
Sbjct: 500 KPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEE 559
Query: 201 TLNQMKTLPNCQPDVYTYST-LIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
+ M+ L C+ ++ ST LIKA CV L + Q P+ + ++
Sbjct: 560 VIQDMELL--CRMNLGIISTMLIKARCVSQGAKLLKKACLQ-----GYKPDIKSLRSIMN 612
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW---------- 308
Y ++ +L + E + D+ + +I+ + + + E++
Sbjct: 613 AYVMTEKHEEGLSLLECICEHVSFSQDLISECSIMLLCRKQTSISAYEQYSQRLMLKYPG 672
Query: 309 -----YEKFRNFGIDPE-----TRTFNIL--IGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
YE I+ E + F + IG K +Y+ S++ KL FP T+
Sbjct: 673 QNCNLYEYLITCLIEAEFFSEACQVFCDMQFIGIEASKSIYE---SIISTYCKLGFPETA 729
Query: 357 STYNN-----------------VIEAFSDMGDAKHMEYTFEQM-HAEGMKADTKTFCCLI 398
+ +IEA+ + + E + + A G+ D + + LI
Sbjct: 730 HRLMDDALQSGIPLNILSCRVIIIEAYGKIKLWQQAEILVKGLRQASGI--DRRIWNALI 787
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
+ YA +GL+ K + K V N ++ A I L E+ V + +++ + +
Sbjct: 788 HAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFK 847
Query: 459 PDSETFSIMTEAYAKEG 475
T ++ +A+AK G
Sbjct: 848 ISKSTVLLLLDAFAKAG 864
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 159/382 (41%), Gaps = 37/382 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNS-------- 193
P T+ ++ L G+ A +V +EM +G P P +Y +L A CR+
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 194 ---------------------------LIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
+DEA L ++ C+ D+ +Y+ ++K
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFF-GCEADIVSYNAVLKGLC 227
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
A R+ +E L +M PN VT N ++G + G+F+++ VL+ M E C PD+
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG-CTPDI 286
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
TI+ +G +++ + ++G+ P +N ++ + + ++
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M + P T+N +++ F G + EQM + G D T+ +ING+ GL
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL 406
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ + ++ S N Y V+ A ++ E + +M ++ C P+ TF+
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNT 466
Query: 467 MTEAYAKEGMNDKVYALEQEKL 488
+ K+G+ ++ L ++ L
Sbjct: 467 LINFLCKKGLVEQAIELLKQML 488
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 152/338 (44%), Gaps = 2/338 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ L ++G E +V +M E G P +Y ++ C+ ++ A
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
LN+M + +P+V Y+T++K A R++ E L +M ++ + VT NI++ +
Sbjct: 309 LNRMPSY-GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFC 367
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G+ D++ +L ML S C PDV T T+++ F +G +D + + G P T
Sbjct: 368 QNGLVDRVIELLEQML-SHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
++ I++ + +M M + P T+N +I G + +Q
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G D ++ +I+G AG + + + + I+ N Y+++ A +
Sbjct: 487 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGR 546
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ ++ +++ +K+ R D+ ++ + + K D+
Sbjct: 547 VNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDR 584
>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 188/432 (43%), Gaps = 37/432 (8%)
Query: 91 IKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKL 150
++ L K++ER K + V V + +ALQ+ M + K T + +
Sbjct: 255 LQRLYKEIERD-KLELDVQLVNDIIMGFAKSGDPSRALQLLGMAQATGL-SAKTATLVSI 312
Query: 151 LVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPN 210
+ L SG+ A +F E+ + GI+P + Y ALL Y + + +A + +++M+
Sbjct: 313 ISALANSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEK-RG 371
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
PD +TYS LI A V+A R+E + ++M+ V PN+ + +L GY G + +
Sbjct: 372 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTF 431
Query: 271 RVLSGM----------------------------------LESATCKPDVWTMNTILSVF 296
+VL M + S +PD T NT++
Sbjct: 432 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 491
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
G+ + E +E G P T+NI+I +YG + +D M ++ M+
Sbjct: 492 CKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 551
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
T+ +++ + G E+M + G+K + + LIN YA GL + +++ R+
Sbjct: 552 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV 611
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ + ++ N++I+A + E V + MKE +PD T++ + +A +
Sbjct: 612 MTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDK 671
Query: 477 NDKVYALEQEKL 488
KV + +E +
Sbjct: 672 FQKVPGVYEEMI 683
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/485 (22%), Positives = 199/485 (41%), Gaps = 52/485 (10%)
Query: 28 KTNKHRAQVPNFNLIHCSVTSTNKHTSFSSESAVAAKKRLWKEGEYPGVS------ETSI 81
+ + +++ N++L+ S+T NK S +RL+KE E + I
Sbjct: 226 RQDGYQSDFVNYSLVIQSLTRCNKIDS-------VMLQRLYKEIERDKLELDVQLVNDII 278
Query: 82 PGYRSKRTPIKNLKK-KLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFY 140
G+ P + L+ + + A T+ S + +A +FE L+ Q
Sbjct: 279 MGFAKSGDPSRALQLLGMAQATGLSAKTATLVSIISALANSGRTLEAEALFEELR-QSGI 337
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P+ Y LL K+G + A + +EM + G+ P Y+ L+ AY + A +
Sbjct: 338 KPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARI 397
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +M+T + QP+ + +S L+ D ++ + ++M V P+ N+V+ +
Sbjct: 398 VLKEMET-GDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTF 456
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
GK D ML S +PD T NT++ G+ + E +E G P
Sbjct: 457 GKFNCLDHAMTTFDRML-SEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPC 515
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+NI+I +YG + +D M ++ M+ T+ +++ + G E
Sbjct: 516 ATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLE 575
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK--------------------- 419
+M + G+K + + LIN YA GL + +++ R+ +
Sbjct: 576 EMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDR 635
Query: 420 --------LQ------IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
LQ + +V Y ++ A I+ D ++ VY+ M C+PD + S
Sbjct: 636 RDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPGVYEEMIMSGCKPDRKARS 695
Query: 466 IMTEA 470
++ A
Sbjct: 696 MLRSA 700
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 140/300 (46%), Gaps = 4/300 (1%)
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE--LIE 235
TP Y AL+ A RN+ I++A +++M+ Q D YS +I++ + + +++
Sbjct: 198 TPLTYNALIGACARNNDIEKALNLISRMRQ-DGYQSDFVNYSLVIQSLTRCNKIDSVMLQ 256
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
LY++++ + + N ++ G+ K+G + ++L GM ++ T+ +I+S
Sbjct: 257 RLYKEIERDKLELDVQLVNDIIMGFAKSGDPSRALQLL-GMAQATGLSAKTATLVSIISA 315
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
AN G+ E +E+ R GI P T+ +N L+ Y K ++ M K
Sbjct: 316 LANSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPD 375
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
TY+ +I+A+ + G + ++M ++ ++ F L+ GY + G + K ++
Sbjct: 376 EHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLK 435
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + + FYN VI K + L + RM + PD T++ + + + K G
Sbjct: 436 EMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHG 495
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 117/307 (38%), Gaps = 42/307 (13%)
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
LY+ L+ A R+ + EAF+ L+Q +TL TY+ LI AC E L
Sbjct: 171 LYSILIHALGRSEKLYEAFL-LSQKQTLTPL-----TYNALIGACARNNDIEKALNLISR 224
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQ-MERVLSGMLESATCKPDVWTMNTILSVFANK 299
M + + V ++V+ + D M + L +E + DV +N I+ FA
Sbjct: 225 MRQDGYQSDFVNYSLVIQSLTRCNKIDSVMLQRLYKEIERDKLELDVQLVNDIIMGFAKS 284
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G DP +R +L A + ++T
Sbjct: 285 G-----------------DP-SRALQLLGMA-----------------QATGLSAKTATL 309
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
++I A ++ G E FE++ G+K TK + L+ GY G V K
Sbjct: 310 VSIISALANSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEK 369
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
++ + Y+ +I A + A V K M+ +P+S FS + Y G K
Sbjct: 370 RGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQK 429
Query: 480 VYALEQE 486
+ + +E
Sbjct: 430 TFQVLKE 436
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 152/359 (42%), Gaps = 36/359 (10%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL L K+G+ A V+ +M+ GI P + + ++ A+C++ +DEA + +M+ L
Sbjct: 197 LLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENL- 255
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+P++ TY +LI V E + + + M E+ V+ N VT +++ GY K D+
Sbjct: 256 GVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEA 315
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
E+VL GM E A PD ++ + G++D R ++ G+ N LI
Sbjct: 316 EKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLIN 375
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
Y K+ + V+ M S +YN +++ + G ++M EG++
Sbjct: 376 GYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEP 435
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIA-ENVSF-------------------- 428
T+ L+ G G F + L K +A + V +
Sbjct: 436 TVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLW 495
Query: 429 --------------YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+N +IS K ++E E ++ +MK+ C PD T+ + + Y K
Sbjct: 496 KDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 554
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 174/447 (38%), Gaps = 46/447 (10%)
Query: 81 IPGYRSKRTPIKNLKKKLERKAKAKAW-----VNTVAETFSDHVLKKQWFQALQV----- 130
IP RS + + NL K E + V V + F ++ + + +V
Sbjct: 188 IPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAG 247
Query: 131 FEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYC 190
F E +P TY L+ G E A+ V M E+G+ YT L+ YC
Sbjct: 248 FVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYC 307
Query: 191 RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT 250
+ +DEA L M+ PD Y LI + + L +M + N
Sbjct: 308 KQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNL 367
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYE 310
N ++ GY K G + E V++ M++ KPD ++ NT+L + +G +
Sbjct: 368 FICNSLINGYCKRGEIHEAEGVITRMVD-WNLKPDSYSYNTLLDGYCREGHTSEAFNLCD 426
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKM-------------------SSVMEYMRKLQ 351
K GI+P T+N L+ + +D S++++ + K++
Sbjct: 427 KMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKME 486
Query: 352 ----------------FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
F + T+N +I MG E F++M G D T+
Sbjct: 487 NFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYR 546
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
LI+GY A + + I+ ++ YN++IS K+ L+E + M +
Sbjct: 547 TLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIR 606
Query: 456 HCRPDSETFSIMTEAYAKEGMNDKVYA 482
P+ T+ + + + KEGM DK ++
Sbjct: 607 GLTPNIVTYGALIDGWCKEGMLDKAFS 633
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 147/381 (38%), Gaps = 34/381 (8%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P +Y LL + G A + ++M++EGIEPT Y LL CR D+A
Sbjct: 399 KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ 458
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ M PD YSTL+ FE TL++D+ R T + +T N ++ G
Sbjct: 459 IWHLMMKX-GVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 517
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + E + M + C PD T T++ + V + I P
Sbjct: 518 CKMGKMVEAEEIFDKM-KDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPS 576
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+N LI K R + + ++ M TY +I+ + G ++
Sbjct: 577 IEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYF 636
Query: 381 QMHAEGMKADTKTFCCLINGYANAG-------LFHKVI-------------SSVRLASKL 420
+M G+ A+ +++G G L K++ S +R A+
Sbjct: 637 EMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQ 696
Query: 421 QIAENVS------------FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+IA+++ YN I+ K + + R + + K PD+ T+ +
Sbjct: 697 KIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLI 756
Query: 469 EAYAKEGMNDKVYALEQEKLQ 489
Y+ G D+ + L E L+
Sbjct: 757 HGYSAAGNVDEAFRLRDEMLR 777
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 173/407 (42%), Gaps = 31/407 (7%)
Query: 98 LERKAKAKAWVNTV-AETFSDHVLKKQWFQ---ALQVFEMLKEQPFYQPKEGTYMKLLVL 153
L R+ A + +N V ++ D VL+ +L F+ + +Q ++P +Y KL+ +
Sbjct: 52 LLRRCNAISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHI 111
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI-DEAFVTLNQMKTLPNCQ 212
L + + R N++V+ L R ++I DE + P
Sbjct: 112 LSRGRMYDETRAYLNQLVD------------LCKFKDRGNVIWDELVGVYREFAFSPT-- 157
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
+ ++K V+ + ++ +M + P+ + N +L K G V
Sbjct: 158 ----VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYV 213
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
M+ PDV+ ++ +++ F G+VD + +K N G++P T++ LI Y
Sbjct: 214 YQQMIRVGIV-PDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYV 272
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE-GMKADT 391
+ V+++M + TY +I+ + E M E + D
Sbjct: 273 SLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDE 332
Query: 392 KTFCCLINGYANAGLFHKVISSVRLAS---KLQIAENVSFYNAVISACIKADDLMEMERV 448
+ + LI+GY G K+ +VRL +L + N+ N++I+ K ++ E E V
Sbjct: 333 RAYGVLIDGYCRTG---KIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGV 389
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
RM + + +PDS +++ + + Y +EG + + L + LQ +E +
Sbjct: 390 ITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPT 436
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 143/368 (38%), Gaps = 46/368 (12%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
T+ ++ L K G+ A ++F++M + G P Y L+ YC+ S + +AF M
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ P + Y++LI + R L +M R +TPN VT ++ G+ K GM
Sbjct: 569 ER-EXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGM 627
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF- 324
D+ M E+ ++ +T++S G++D +K + G P+ F
Sbjct: 628 LDKAFSSYFEMTENGL-SANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFL 686
Query: 325 --NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
+I A K S+ E + P + YN I G F +
Sbjct: 687 KSDIRYAAIQKI-----ADSLDESCKTFLLP-NNIVYNIAIAGLCKTGKVDDARRFFSML 740
Query: 383 HAEGMKADTKTFCCLINGYANAG----------------------LFHKVISSV------ 414
+G D T+C LI+GY+ AG ++ +I+ +
Sbjct: 741 SLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENV 800
Query: 415 ----RLASKLQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
RL KL + NV YN +I K ++ ++ +M E+ P T+S +
Sbjct: 801 DRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSAL 860
Query: 468 TEAYAKEG 475
K G
Sbjct: 861 INGLCKHG 868
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 134/345 (38%), Gaps = 36/345 (10%)
Query: 136 EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI 195
E+ P Y L+ L KS + + EM G+ P Y AL+ +C+ ++
Sbjct: 569 EREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGML 628
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIKAC----------------VD------------ 227
D+AF + +M T ++ ST++ VD
Sbjct: 629 DKAFSSYFEM-TENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLK 687
Query: 228 -AMRFELIETLYQDMDERSVT---PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK 283
+R+ I+ + +DE T PN + NI + G K G D R S ML
Sbjct: 688 SDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFS-MLSLKGFV 746
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
PD +T T++ ++ G VD R ++ G+ P T+N LI K D+ +
Sbjct: 747 PDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRL 806
Query: 344 MEYM-RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+ +K FP TYN +I+ + +G+ ++M EG+ T+ LING
Sbjct: 807 FHKLHQKGLFP-NVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLC 865
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
G + + + K + + Y ++ K + EM +
Sbjct: 866 KHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNYNEMSK 910
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 8/159 (5%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
A + F ML + F P TY L+ +G + A ++ +EM+ G+ P Y AL
Sbjct: 732 DARRFFSMLSLKGFV-PDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNAL 790
Query: 186 LAAYCRNSLIDEA---FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
+ C++ +D A F L+Q PN V TY+TLI + L M
Sbjct: 791 INGLCKSENVDRAQRLFHKLHQKGLFPN----VVTYNTLIDGYCKIGNMDAAFKLKDKMI 846
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
E ++P+ VT + ++ G K G ++ ++L+ M+++
Sbjct: 847 EEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGV 885
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 155/350 (44%), Gaps = 3/350 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
AL+V +M+ + F P TY L+ L K G+ + A KV N+M+E P Y +
Sbjct: 319 HALEVMDMMLREGF-DPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTI 377
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
++ C+ + ++EA L + T PDV TY++LI+ + + LY++M +
Sbjct: 378 ISTLCKENQVEEA-TKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKG 436
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ T N+++ G + +L M E + C +V T NT++ F ++
Sbjct: 437 CHPDEFTYNMLIDSLCFRGKLQEALNLLKEM-EVSGCARNVITYNTLIDGFCKNKRIAEA 495
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E +++ G+ + T+N LI K ++ S +M+ M TYN+++
Sbjct: 496 EEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTY 555
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
F GD K + M ++G + D T+ LI G AG +R I
Sbjct: 556 FCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLT 615
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
YN VI A + E R+++ M EK PD+ T+ I+ + G
Sbjct: 616 PHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGG 665
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 143/337 (42%), Gaps = 7/337 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E T+ ++ + G + A +V +MVE G T L+ +C+ I+EA
Sbjct: 228 PDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRF 287
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ +M PD YT++ L+ + + M P+ T N ++ G
Sbjct: 288 IEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLC 347
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G D+ +VL+ M+E C P+ T NTI+S + QV+ + GI P+
Sbjct: 348 KLGEVDEAVKVLNQMIER-DCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDV 406
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+N LI R + + + M+ TYN +I++ G + ++
Sbjct: 407 CTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKE 466
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIK 438
M G + T+ LI+G+ ++ + + +++ ++ N YN +I K
Sbjct: 467 MEVSGCARNVITYNTLIDGFCKN---KRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCK 523
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++ + E ++ +M + RPD T++ + + K G
Sbjct: 524 SERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAG 560
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 165/409 (40%), Gaps = 48/409 (11%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+ +F +QP ++P + ++L LGK+G+ + + + EM + +
Sbjct: 72 VIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFI 131
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+Y L +E ++ M+ + + Y+ L+ VD + +L+E + +M R +
Sbjct: 132 ESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGI 191
Query: 247 TPNTVTQNI-----------------------------------VLGGYGKAGMFDQMER 271
P+ T NI ++ G+ + G D R
Sbjct: 192 RPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMR 251
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR-NFGIDPETRTFNILIGA 330
V M+E A C T+N +++ F +G+++ R+ E+ G P+ TFN+L+
Sbjct: 252 VKEQMVE-AGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNG 310
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
K VM+ M + F TYN++I +G+ QM +
Sbjct: 311 LSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPN 370
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA-CIKADDLMEMERVY 449
T T+ +I+ + + + I +V YN++I C+ + + ME +Y
Sbjct: 371 TVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAME-LY 429
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQML--LEASG 496
K MK K C PD T++++ ++ G QE L +L +E SG
Sbjct: 430 KEMKTKGCHPDEFTYNMLIDSLCFRGK-------LQEALNLLKEMEVSG 471
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/408 (21%), Positives = 159/408 (38%), Gaps = 47/408 (11%)
Query: 123 QWFQALQV-FEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
Q+ A++V F ++ FY LL +L + +L + MV GI P
Sbjct: 145 QFVDAMEVEFGVVANTHFYN-------FLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVST 197
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+ L+ A CR I A + + +M+ PD T++T+++ ++ + + + M
Sbjct: 198 FNILIKALCRAHQIRPAILLMEEMEDF-GLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQM 256
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
E VT N+++ G+ K G ++ R + M PD +T N +++ + G
Sbjct: 257 VEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGH 316
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
V + G DP+ T+N LI K D+ V+ M + + TYN
Sbjct: 317 VKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNT 376
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING--------------------- 400
+I + + +G+ D T+ LI G
Sbjct: 377 IISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKG 436
Query: 401 -YANAGLFHKVISSVRLASKLQ-------------IAENVSFYNAVISACIKADDLMEME 446
+ + ++ +I S+ KLQ A NV YN +I K + E E
Sbjct: 437 CHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAE 496
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEA 494
++ +M+ + +S T++ + + K +++V Q QM++E
Sbjct: 497 EIFDQMELQGVSRNSVTYNTLIDGLCK---SERVEEASQLMDQMIMEG 541
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 158/360 (43%), Gaps = 5/360 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ + G+ A ++ + + +G+ P YT L+ AYC+ D A
Sbjct: 341 KPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASN 400
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +M T +PD+ TY L+ V A ++ T+ + M ER V P+ NI++ G
Sbjct: 401 WLIEM-TERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGL 459
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K + +L+ ML+ + PD + T++ F G +D + +E G++P
Sbjct: 460 CKKFKLPAAKLLLAEMLDQSVL-PDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPG 518
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+N +I Y K M + + M+K TY+ VI+ + D + F
Sbjct: 519 IVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFR 578
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M K + T+ LING+ G H+ + R + NV Y+ +I + K
Sbjct: 579 EMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEA 638
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG---MNDKVYALEQEKLQMLLEASGH 497
L++ ++ M C P+ TF+ + ++K G +++K ++ K M L G
Sbjct: 639 KLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGR 698
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 173/421 (41%), Gaps = 48/421 (11%)
Query: 97 KLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGK 156
++E + + ++ V + +SD L ++ AL+++ + + Y P LL +L K
Sbjct: 121 RVEEMSPTREAMSIVIQAYSDSGLVEK---ALELYYFVLKTYTYFPDVIACNSLLNMLVK 177
Query: 157 SGQPELARKVFNEMVE---------------------------------------EGIEP 177
G+ E+ARK+++EM+E +G P
Sbjct: 178 LGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIP 237
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
Y L+ YC+ ++ A ++K L P V TY +I F+ I+ L
Sbjct: 238 NIIFYNTLIDGYCKKGDMEMANGLFIELK-LKGFLPTVETYGAIINGFCKKGDFKAIDRL 296
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
+M+ R +T N N ++ K G + + GM+E CKPD+ T NT++S
Sbjct: 297 LMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECG-CKPDIVTYNTLISGSC 355
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
G+V ++ E+ G+ P ++ LI AY K+ YD+ S+ + M +
Sbjct: 356 RDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLV 415
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
TY ++ G+ E+M G+ D + L++G F + + LA
Sbjct: 416 TYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKK--FKLPAAKLLLA 473
Query: 418 SKLQ--IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
L + + Y ++ I+ +L E ++++ EK P ++ M + Y K G
Sbjct: 474 EMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFG 533
Query: 476 M 476
M
Sbjct: 534 M 534
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 154/387 (39%), Gaps = 35/387 (9%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
++P TY L+ L +G+ ++A + +M+E G+ P +Y L++ C+ + A
Sbjct: 410 HKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAK 469
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+ L +M + PD + Y+TL+ + + L++ E+ + P V N ++ G
Sbjct: 470 LLLAEMLD-QSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKG 528
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
Y K GM ++ M + PD +T +T++ + + +D ++ + + P
Sbjct: 529 YCKFGMMKDAMACINRM-KKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKP 587
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
T+ LI + +K + + M+ TY+ +I +F F
Sbjct: 588 NVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFF 647
Query: 380 EQMHAEGMKADTKTFCCLINGYANAG---------------------LFHKVISSVRLAS 418
E+M + TF L+NG++ G F ++IS
Sbjct: 648 EEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISD----- 702
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF-----SIMTEAYAK 473
A + YN+++ + ++ +M K C PDS +F + E +K
Sbjct: 703 --GWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSK 760
Query: 474 EGMNDKVYALEQEKLQMLLEASGHWQQ 500
E N L + +LQ+ + S Q
Sbjct: 761 EWKNIVSCNLNERELQIAVNYSSILDQ 787
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 151/395 (38%), Gaps = 8/395 (2%)
Query: 100 RKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEG-TYMKLLVLLGKSG 158
R ++++ + VA D + + L+ F+ + + P G Y LL LL +S
Sbjct: 51 RFSESEVLASDVAHLVLDRIRDVEL--GLKFFDWVSRGQYSGPINGFAYSSLLKLLARSR 108
Query: 159 QPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTY 218
V M E + PT E + ++ AY + L+++A + PDV
Sbjct: 109 VFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIAC 168
Query: 219 STLIKACVDAMRFELIETLYQDMDERSVTPNTVTQN----IVLGGYGKAGMFDQMERVLS 274
++L+ V R E+ LY +M E + N I++ G K G ++ +++
Sbjct: 169 NSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIE 228
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
C P++ NT++ + KG ++M + + + G P T+ +I + KK
Sbjct: 229 DRWGQG-CIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKK 287
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
+ + ++ M YN +I+A G T E M G K D T+
Sbjct: 288 GDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTY 347
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
LI+G G + + A + N Y +I A K M E
Sbjct: 348 NTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTE 407
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ +PD T+ + G D + ++ L+
Sbjct: 408 RGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLE 442
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 162/340 (47%), Gaps = 8/340 (2%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL L K G+ A++VF +V G+ PT +Y L+ YC+ + AF QMK+
Sbjct: 340 LLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKS-R 398
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+ +PD TY+ LI E L +M++ V P+ T N ++ YG AG ++
Sbjct: 399 HIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC 458
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
VLS M + K DV + +++ F G++ + + P + +N +I
Sbjct: 459 FTVLSDMQQKGI-KSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIID 517
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF---SDMGDAKHMEYTFEQMHAEG 386
AY + ++ ++E M+ + TYN +++ S + +A+ + YT +G
Sbjct: 518 AYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRN---QG 574
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
++ D ++ +I+ N G K + ++ +K I + + ++SA A + +ME
Sbjct: 575 LRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDME 634
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+Y++M K+ P S + IM +AY + + KV +L++E
Sbjct: 635 CLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKE 674
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 147/345 (42%), Gaps = 2/345 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P +Y ++ L +SG+ A KVF+EMV+ G+ P Y ++ + + ++ F
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRL 251
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+QM +P+V TY+ L+ R + L +M S+ P+ T +I+ G
Sbjct: 252 RDQMLH-DGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLT 310
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G M + + L+ +T + +L+ G+V ++ +E + G+ P T
Sbjct: 311 RTGESQTMLSLFAESLKKGV-MLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTT 369
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+N LI Y + R + E M+ TYN +I + E +
Sbjct: 370 VIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVME 429
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G+ +TF LI+ Y AG K + + + I +V + +V+ A K
Sbjct: 430 MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 489
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ E + M K P+++ ++ + +AY + G ++ L ++
Sbjct: 490 IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEK 534
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 163/395 (41%), Gaps = 36/395 (9%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
AL+VF+ + + P TY ++ K G E ++ ++M+ +G +P Y L
Sbjct: 212 DALKVFDEMVDMGV-APNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVL 270
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L+ CR +DE +++M + + PD +TYS L + + +L+ + ++
Sbjct: 271 LSGLCRTGRMDETRALMDEMAS-HSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKG 329
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVL-----SGM-------------------LESAT 281
V T +I+L G K G + ++V +G+ L A
Sbjct: 330 VMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAF 389
Query: 282 C----------KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
C +PD T N +++ V E + G+DP TFN LI AY
Sbjct: 390 CIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAY 449
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
G +K +V+ M++ ++ +V++AF G + M + + +
Sbjct: 450 GTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNA 509
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
+ + +I+ Y +G + + V ++ ++ YN ++ ++ + E E +
Sbjct: 510 QVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYT 569
Query: 452 MKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
++ + RPD +++ + A +G DK L QE
Sbjct: 570 LRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 604
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 117/259 (45%), Gaps = 11/259 (4%)
Query: 117 DHVLKKQWFQALQVFEMLK---------EQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
DH+ L EM+ E+ P T+ L+ G +GQ E V
Sbjct: 403 DHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVL 462
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
++M ++GI+ + +++ A+C+N I EA L+ M + P+ Y+++I A ++
Sbjct: 463 SDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDM-IYKDVAPNAQVYNSIIDAYIE 521
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
+ E L + M V+ + VT N++L G ++ D+ E ++ L + +PDV
Sbjct: 522 SGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIY-TLRNQGLRPDVV 580
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
+ NTI+S NKG D ++ +GI P RT + L+ A M + + M
Sbjct: 581 SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQM 640
Query: 348 RKLQFPWTSSTYNNVIEAF 366
+SS Y +++A+
Sbjct: 641 LHKNVEPSSSIYGIMVDAY 659
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 122/275 (44%), Gaps = 3/275 (1%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A +FE +K + +P TY L+ L K A + EM + G++P+ E + L+
Sbjct: 388 AFCIFEQMKSR-HIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLI 446
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
AY +++ F L+ M+ + DV ++ +++KA + + DM + V
Sbjct: 447 DAYGTAGQLEKCFTVLSDMQQ-KGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDV 505
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PN N ++ Y ++G +Q ++ M S + T N +L Q+D E
Sbjct: 506 APNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGV-SASIVTYNLLLKGLCRSSQIDEAE 564
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
RN G+ P+ ++N +I A K DK +++ M K T T + ++ A
Sbjct: 565 ELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSAL 624
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+ G ME ++QM + ++ + + +++ Y
Sbjct: 625 ASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAY 659
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 124/287 (43%), Gaps = 8/287 (2%)
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDM--DERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+PD + ++ +++ACV A ++ + + M E + P+ + N+V+ G ++G
Sbjct: 154 RPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDA 213
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+V M++ P+ T NT++ G ++ R ++ + G P T+N+L+
Sbjct: 214 LKVFDEMVDMGV-APNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLS 272
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+ D+ ++M+ M TY+ + + + G+++ M F + +G+
Sbjct: 273 GLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVML 332
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
T L+NG G K + + YN +I+ + DL ++
Sbjct: 333 GAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIF 392
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
++MK +H RPD T++ + K M K E L M +E SG
Sbjct: 393 EQMKSRHIRPDHITYNALINGLCKLEMVTKA-----EDLVMEMEKSG 434
>gi|334184699|ref|NP_001189682.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330253975|gb|AEC09069.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 613
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 178/407 (43%), Gaps = 39/407 (9%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
L K+W + V E + + +QP + L+ G+ Q + A ++ +++E PT
Sbjct: 153 LNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTE 212
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMK-----------TLPN------------------ 210
+ Y L+ AYC LI+ A V L +M+ T+ N
Sbjct: 213 DTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAID 272
Query: 211 ---------CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
C+P TY+ +I A + + LY +M PN T ++ +
Sbjct: 273 VFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFA 332
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G+ ++ E + + E +PDV+ N ++ ++ G + ++ G +P+
Sbjct: 333 REGLCEKAEEIFEQLQEDGL-EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDR 391
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
++NI++ AYG+ ++ +V E M++L T ++ ++ A+S D E ++
Sbjct: 392 ASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKE 451
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G++ DT ++N Y G F K+ + ++S YN +I+ KA
Sbjct: 452 MSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGF 511
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
L +E ++ +KEK+ RPD T++ AY+++ + K + +E +
Sbjct: 512 LERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMI 558
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 145/327 (44%), Gaps = 3/327 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ VF+ +K +P TY ++ L GK+ + ++ K++ EM +P YTAL
Sbjct: 269 EAIDVFQRMKRDRC-KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTAL 327
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A+ R L ++A Q++ +PDVY Y+ L+++ A ++ M
Sbjct: 328 VNAFAREGLCEKAEEIFEQLQE-DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMG 386
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ + NI++ YG+AG+ E V M + P + + +LS ++ V
Sbjct: 387 CEPDRASYNIMVDAYGRAGLHSDAEAVFEEM-KRLGIAPTMKSHMLLLSAYSKARDVTKC 445
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E ++ G++P+T N ++ YG+ + KM ++ M STYN +I
Sbjct: 446 EAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINI 505
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ G + +E F ++ + + D T+ I Y+ L+ K + A +
Sbjct: 506 YGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPD 565
Query: 426 VSFYNAVISACIKADDLMEMERVYKRM 452
++SAC + + ++ V + M
Sbjct: 566 GGTAKVLLSACSSEEQVEQVTSVLRTM 592
>gi|452825793|gb|EME32788.1| mitochondrial protein translocase, MPT family [Galdieria
sulphuraria]
Length = 821
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 149/353 (42%), Gaps = 6/353 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ K +PE A K+F EM E ++P Y++L++A+CR ++ A
Sbjct: 421 PDVVTYATLIDAFSKRMEPERALKLFQEMKEANVKPNNYCYSSLISAFCRAGYVERALAI 480
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+M T PDV+ ++ LI + + +Y M + + P+ +T N ++ G
Sbjct: 481 FEEM-THERIVPDVFAFNALIDGFGKLRQVDKAFEIYDRMRKLQIQPDRITFNALISASG 539
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
KA + + M E PD + N ++ G +E+ R GI P T
Sbjct: 540 KAKNSIRALEAMGDMTEIYGLTPDRHSYNALIDACGKSGDFTKAYEVFEEMRTKGIRPCT 599
Query: 322 RTFNILIGAYGKKRMYDKMSS--VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
TFN LI YG R +D +S +++ M + + T N +I A + D
Sbjct: 600 VTFNALI--YGASRSHDLAASFKIVDLMLQEGLNPDAYTMNTLISACNRRQDLSTAFEVL 657
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
E+ G+ D TF I+ K+ + I+ + N ++ C +
Sbjct: 658 EKFKQLGVHPDNVTFNTFIDAVGKLDSSEKMFELLSEMESRGISPSKVTLNTIVGCCGRR 717
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK-VYALEQEKLQML 491
+ MER + EK PDS TFS++ E Y + DK V A K Q L
Sbjct: 718 GKIDLMERGFHMFHEKRLEPDSVTFSLLIENYVSHHLLDKAVIAYHNCKRQQL 770
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 151/352 (42%), Gaps = 37/352 (10%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL++F+ +KE +P Y L+ ++G E A +F EM E I P + AL
Sbjct: 441 RALKLFQEMKEANV-KPNNYCYSSLISAFCRAGYVERALAIFEEMTHERIVPDVFAFNAL 499
Query: 186 LAAYCRNSLIDEAFVTLNQMKTL---PN-------------------------------- 210
+ + + +D+AF ++M+ L P+
Sbjct: 500 IDGFGKLRQVDKAFEIYDRMRKLQIQPDRITFNALISASGKAKNSIRALEAMGDMTEIYG 559
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
PD ++Y+ LI AC + F ++++M + + P TVT N ++ G ++
Sbjct: 560 LTPDRHSYNALIDACGKSGDFTKAYEVFEEMRTKGIRPCTVTFNALIYGASRSHDLAASF 619
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
+++ ML+ PD +TMNT++S + + EKF+ G+ P+ TFN I A
Sbjct: 620 KIVDLMLQEG-LNPDAYTMNTLISACNRRQDLSTAFEVLEKFKQLGVHPDNVTFNTFIDA 678
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
GK +KM ++ M + T N ++ G ME F H + ++ D
Sbjct: 679 VGKLDSSEKMFELLSEMESRGISPSKVTLNTIVGCCGRRGKIDLMERGFHMFHEKRLEPD 738
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
+ TF LI Y + L K + + + Q+ N + ++ + I+ D++
Sbjct: 739 SVTFSLLIENYVSHHLLDKAVIAYHNCKRQQLELNSNVVMHLLESLIRKDEI 790
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 172/407 (42%), Gaps = 50/407 (12%)
Query: 126 QALQVFEMLKEQPFYQPKE--GTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
+A + +M P + K ++ + LG+ + A + M EE I+P Y+
Sbjct: 292 KARECLDMFLSMPSNEVKRDVASWSIYITALGRLERYSEAERSLIWMREEHIQPNIYTYS 351
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL-----IETLY 238
AL+ + L A +M + N P+ TY+ +IK R + +L
Sbjct: 352 ALIETLGKGGLCVRALSQFRRMSRIDNIAPNTVTYNAVIKIVSRCKRNDCGGITRAMSLL 411
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
++M + P+ VT ++ + K ++ ++ M E A KP+ + ++++S F
Sbjct: 412 REMATKGCIPDVVTYATLIDAFSKRMEPERALKLFQEMKE-ANVKPNNYCYSSLISAFCR 470
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
G V+ +E+ + I P+ FN LI +GK R DK + + MRKLQ T
Sbjct: 471 AGYVERALAIFEEMTHERIVPDVFAFNALIDGFGKLRQVDKAFEIYDRMRKLQIQPDRIT 530
Query: 359 YN----------NVIEAFSDMGD---------------------AKHMEYT-----FEQM 382
+N N I A MGD K ++T FE+M
Sbjct: 531 FNALISASGKAKNSIRALEAMGDMTEIYGLTPDRHSYNALIDACGKSGDFTKAYEVFEEM 590
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS-KLQIAENVSFY--NAVISACIKA 439
+G++ T TF LI G + + H + +S ++ LQ N Y N +ISAC +
Sbjct: 591 RTKGIRPCTVTFNALIYGASRS---HDLAASFKIVDLMLQEGLNPDAYTMNTLISACNRR 647
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
DL V ++ K+ PD+ TF+ +A K ++K++ L E
Sbjct: 648 QDLSTAFEVLEKFKQLGVHPDNVTFNTFIDAVGKLDSSEKMFELLSE 694
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 116/249 (46%), Gaps = 10/249 (4%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K +AL+ + E P +Y L+ GKSG A +VF EM +GI P
Sbjct: 542 KNSIRALEAMGDMTEIYGLTPDRHSYNALIDACGKSGDFTKAYEVFEEMRTKGIRPCTVT 601
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD----AMRFELIETL 237
+ AL+ R+ + +F ++ M PD YT +TLI AC + FE++E
Sbjct: 602 FNALIYGASRSHDLAASFKIVDLMLQ-EGLNPDAYTMNTLISACNRRQDLSTAFEVLEKF 660
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
Q V P+ VT N + GK ++M +LS M ES P T+NTI+
Sbjct: 661 KQ----LGVHPDNVTFNTFIDAVGKLDSSEKMFELLSEM-ESRGISPSKVTLNTIVGCCG 715
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+G++D+MER + F ++P++ TF++LI Y + DK ++ Q S+
Sbjct: 716 RRGKIDLMERGFHMFHEKRLEPDSVTFSLLIENYVSHHLLDKAVIAYHNCKRQQLELNSN 775
Query: 358 TYNNVIEAF 366
+++E+
Sbjct: 776 VVMHLLESL 784
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 169/367 (46%), Gaps = 10/367 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ + E + E+ P TY ++ ++ + + A +MV EG P YTAL
Sbjct: 127 EAVALVETMAERGC-APTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTAL 185
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +C++ + L ++ T PD+ TYST+I A R ++++M S
Sbjct: 186 IGGFCKSRDVGRGLELLGEV-TRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---S 241
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P +T N ++GGY +AG D+ R+L M++ C PDV T T++S F G++D
Sbjct: 242 CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDD-KCAPDVVTYTTLMSAFCKMGRLDDA 300
Query: 306 ERWYEKFRNFGIDPETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+++ + P+ TF L+ G G+ RM D + + E R+ P T TYN V++
Sbjct: 301 YELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRR-GCPPTIYTYNCVVD 359
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV-RLASKLQ-I 422
+ + E + G +T T+ L+ G AG + + + +L S+
Sbjct: 360 GYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPC 419
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
+V+ Y ++ A + + + Y+ M ++ P + TF+ + A K + +
Sbjct: 420 PTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHE 479
Query: 483 LEQEKLQ 489
L +E ++
Sbjct: 480 LLEEMIK 486
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 150/359 (41%), Gaps = 8/359 (2%)
Query: 122 KQWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
++ A+QV EM+ + + P T ++ L + + AR++ EM+ G+
Sbjct: 53 RRLRDAVQVLQEMVSAR--HVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAI 110
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
Y+AL+ C+ +DEA + M C P V TY+++I A R + +
Sbjct: 111 TYSALVDGLCKCERLDEAVALVETMAE-RGCAPTVVTYNSIITGFCRARRVDEAHGFMEQ 169
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M P+ +T ++GG+ K+ + +L G + PD+ T +T++ G
Sbjct: 170 MVAEGCHPDIITYTALIGGFCKSRDVGRGLELL-GEVTRRGFTPDIVTYSTVIDGLCKAG 228
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+ + + F P T+N LIG Y + D+ ++ M + TY
Sbjct: 229 R---LRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYT 285
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
++ AF MG F+QM A + D TF L++G G + + ++
Sbjct: 286 TLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRR 345
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ YN V+ KA+ + + E + + + P++ T++I+ + G D+
Sbjct: 346 GCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQ 404
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 139/338 (41%), Gaps = 61/338 (18%)
Query: 131 FEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAA 188
E+L E + + P TY ++ L K+G+ A +F EM PT Y +L+
Sbjct: 199 LELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGG 255
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP 248
YCR +DEA L +M C PDV TY+TL+ A R + L+Q M ++P
Sbjct: 256 YCRAGDMDEAIRLLGKMVD-DKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSP 314
Query: 249 NTVT-QNIVLGGYGKAGMFDQMERVLSGMLESAT---CKPDVWTMNTILSVFANKGQVDM 304
+ VT ++V G G+ M D +E +LE T C P ++T N ++ + QV
Sbjct: 315 DVVTFTSLVDGLCGEGRMEDALE-----LLEEITRRGCPPTIYTYNCVVDGYCKANQVRK 369
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ-----FPWTSSTY 359
E FR+ G P T T+NIL+ + D+ ++Y+ +L P + + Y
Sbjct: 370 AEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQ---ALQYLDQLNSEGGPCPTSVAMY 426
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC------------------------ 395
+++A G +E+M G TF
Sbjct: 427 AIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIK 486
Query: 396 -----------CLINGYANAGLFHKVISSVRLASKLQI 422
+++ Y AG+ K + LAS+L++
Sbjct: 487 YGHTPGPGTCDAVVSAYCRAGMIQK---ADELASELRL 521
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 124/306 (40%), Gaps = 34/306 (11%)
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
P ++ +I A R +Y+ M++ + P+ +T ++ G KA +V
Sbjct: 3 PGTLLHNVVIGGLCRAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGLSKARRLRDAVQV 61
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
L M+ SA PD T+ ++ +VD E+ + G+ T++ L+
Sbjct: 62 LQEMV-SARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLC 120
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K D+ +++E M + T TYN++I F EQM AEG D
Sbjct: 121 KCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDII 180
Query: 393 TFCCLINGYANA-----GL-----------------FHKVISSV----RLASKLQIAENV 426
T+ LI G+ + GL + VI + RL + I E +
Sbjct: 181 TYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM 240
Query: 427 SF------YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
S YN++I +A D+ E R+ +M + C PD T++ + A+ K G D
Sbjct: 241 SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDA 300
Query: 481 YALEQE 486
Y L Q+
Sbjct: 301 YELFQQ 306
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A+Q +E + ++ Y P T+ ++ L K+ QP+ A ++ EM++ G P P A++
Sbjct: 442 AVQFYEEMIQRG-YVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVV 500
Query: 187 AAYCRNSLIDEA 198
+AYCR +I +A
Sbjct: 501 SAYCRAGMIQKA 512
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 170/365 (46%), Gaps = 4/365 (1%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
LK + +A+ + ++ F + E Y ++ L K G+ A ++F +M + + P
Sbjct: 152 LKGRVLEAVSLLHEYVDRGF-RFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNL 210
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+Y ++ C+ L+DEA +M + DVY+Y+++I RF+ L
Sbjct: 211 IMYNTVIDGLCKQGLVDEACGLCTEMVE-NGIELDVYSYNSMIHGFCSVGRFQAAVKLLD 269
Query: 240 DMDERS-VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
+M R V P+ T NI++ G K G + V++ M++ KPD+ + N +++ +
Sbjct: 270 EMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGW-KPDIVSYNALMNGYCL 328
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
G V ++ ++K P ++ LI Y K RM D+ ++ M + T
Sbjct: 329 SGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVT 388
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN +++ S G + + E M A G AD T+ L++ Y F K ++ +
Sbjct: 389 YNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHII 448
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
++ I+ N+ YN ++ K+ L + +++ + K C+P+ T++IM KEG D
Sbjct: 449 EIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLD 508
Query: 479 KVYAL 483
+ AL
Sbjct: 509 EAEAL 513
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 148/347 (42%), Gaps = 6/347 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
A+Q+F +K+ Y P Y ++ L K G + A + EMVE GIE Y ++
Sbjct: 193 DAIQMFPKMKKIRVY-PNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +C A L++M PDVYT++ LI R + M +R
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRG 311
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ V+ N ++ GY +G + ++V M+E T P+V + T+++ + VD
Sbjct: 312 WKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVER-TALPNVISYCTLINGYCKVRMVDEA 370
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGK--KRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ N + P+T T+N L+ K + +Y+ ++E MR P TYN ++
Sbjct: 371 MVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYE--WDLVEAMRASGQPADLITYNVLL 428
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
+ + F+ + G+ + +T+ L++G +G +L S
Sbjct: 429 DDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQ 488
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
N+ YN +I K L E E + +M + P+ TF + A
Sbjct: 489 PNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRA 535
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 157/370 (42%), Gaps = 3/370 (0%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K++ + ++ +L+ +P +P T+ L+ + GQ A + +++ G + +
Sbjct: 83 KRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRI 142
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
T L+ C + EA V+L + D Y T+I + ++ M
Sbjct: 143 LTTLMKGLCLKGRVLEA-VSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKM 201
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ V PN + N V+ G K G+ D+ + + M+E+ + DV++ N+++ F + G+
Sbjct: 202 KKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGI-ELDVYSYNSMIHGFCSVGR 260
Query: 302 VDMMERWYEKFRNFG-IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+ ++ G + P+ TFNILI K + +V+ M K + +YN
Sbjct: 261 FQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYN 320
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
++ + G + F++M + ++C LINGY + + + +
Sbjct: 321 ALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNK 380
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+ + YN ++ K+ + + + M+ D T++++ + Y K DK
Sbjct: 381 NLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKA 440
Query: 481 YALEQEKLQM 490
AL Q +++
Sbjct: 441 LALFQHIIEI 450
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 156/382 (40%), Gaps = 36/382 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNS-------- 193
P TY L+ L G+ A V ++M G PTP +Y L A CR S
Sbjct: 109 PNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGV 168
Query: 194 ---------------------------LIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
+DEA L + C+PDV +Y+ +++
Sbjct: 169 LRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLC 228
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
A R+ ++ L ++M PN VT + ++G + G+F+++ V + M E C PDV
Sbjct: 229 MARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHG-CAPDV 287
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
TI+ + ++++ + ++G+ P +N L+ +++ ++
Sbjct: 288 RMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAE 347
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M P T+N +++ G + EQM G D T+ +ING+ GL
Sbjct: 348 MFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGL 407
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ + +R + N Y V+ A+ ++ E + +M ++ C P+ TF+
Sbjct: 408 IDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNT 467
Query: 467 MTEAYAKEGMNDKVYALEQEKL 488
+ K+G+ ++ L ++ L
Sbjct: 468 LINFLCKKGLVEQAIELLKQML 489
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 151/338 (44%), Gaps = 2/338 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ L ++G E +V +M E G P +Y ++ C+ ++ A
Sbjct: 250 PNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGI 309
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
LN+M + P+V Y+TL+K A R+E E L +M ++ + VT NI++
Sbjct: 310 LNRMPSY-GLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLC 368
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G+ D++ VL MLE C PDV T T+++ F +G +D G P T
Sbjct: 369 QNGLVDRVIEVLEQMLEHG-CMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNT 427
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
++ I++ + +M M + P T+N +I G + +Q
Sbjct: 428 VSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 487
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G D ++ +I+G AG + + + + K ++ N Y+++ SA
Sbjct: 488 MLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGR 547
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ ++ ++++ +++ R D+ ++ + + K G D+
Sbjct: 548 INKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDR 585
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 121/309 (39%), Gaps = 6/309 (1%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y A++A YCR + A + PN YTY L++A R + DM
Sbjct: 82 YNAMVAGYCRAGQLAAARRLAASVPVAPN----AYTYFPLVRALCARGRIADALAVLDDM 137
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
R P ++ L +A F VL L C DV N +L ++G
Sbjct: 138 ARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRD-LHGRGCALDVGNCNLVLQAVCDQGP 196
Query: 302 VDMMERWY-EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
VD R + +FG +P+ ++N ++ R + + +ME M P T++
Sbjct: 197 VDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFS 256
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+I G + + QM G D + + +I+G +
Sbjct: 257 TLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSY 316
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
++ NV YN ++ AD E E + M +K C D TF+I+ + + G+ D+V
Sbjct: 317 GLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRV 376
Query: 481 YALEQEKLQ 489
+ ++ L+
Sbjct: 377 IEVLEQMLE 385
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 142/365 (38%), Gaps = 43/365 (11%)
Query: 114 TFSDHVLKKQWFQALQVFEMLKEQPFY--QPKEGTYMKLLVLLGKSGQPELARKVFNEMV 171
T D V K++ + + +L P Y P Y LL L + + E A + EM
Sbjct: 292 TIIDGVCKEERLEVAR--GILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMF 349
Query: 172 EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMR 230
++ + L+ C+N L+D L QM C PDV TY+T+I C + +
Sbjct: 350 DKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLE-HGCMPDVITYTTVINGFCKEGLI 408
Query: 231 FELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMN 290
E + L + M PNTV+ IVL G A + E ++S M++ C P+ T N
Sbjct: 409 DEAV-MLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQG-CPPNPVTFN 466
Query: 291 TILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
T+++ KG V+ ++ G P+ +++ +I GK D+ ++ M K
Sbjct: 467 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKK 526
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
+ Y+++ A S G + FE + +++D
Sbjct: 527 GMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDA------------------- 567
Query: 411 ISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
YNAVIS+ K + M C P+ T++I+
Sbjct: 568 ----------------VLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRG 611
Query: 471 YAKEG 475
A EG
Sbjct: 612 LASEG 616
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 117/276 (42%), Gaps = 37/276 (13%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
T+ L+ L ++G + +V +M+E G P YT ++ +C+ LIDEA + L M
Sbjct: 359 TFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSM 418
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
C+P+ +Y+ ++K A R+ E L M ++ PN VT N ++ K G+
Sbjct: 419 AAC-GCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 477
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTIL-------------------------------- 293
+Q +L ML + C PD+ + +T++
Sbjct: 478 VEQAIELLKQMLVNG-CSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYS 536
Query: 294 ---SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
S + +G+++ + + +E ++ + + +N +I + K+ D+ + YM
Sbjct: 537 SIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSS 596
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
STY +I + G K + ++ ++G
Sbjct: 597 GCVPNESTYTILIRGLASEGFVKEAQEILTELCSKG 632
>gi|167998294|ref|XP_001751853.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696951|gb|EDQ83288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 657
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 157/356 (44%), Gaps = 3/356 (0%)
Query: 125 FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
++A Q F L + + G + ++ ++ + + M+E+G EP E Y A
Sbjct: 294 WKAAQSFINLMQAGGFSFAIGEFTEMQWACARARNSRESLGLLQAMIEQGCEPRLENYNA 353
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
LL AY + + +EA T+ ++ PD T+S+L+ AC +A + E + + M E
Sbjct: 354 LLCAYEKTANWEEAVRTVVWIQE-KGFTPDFITWSSLLGACANAGQAEKAVAVMEKMKEN 412
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ TPN V+ +L Y K G +++ E + ML S C P+ N++LS + Q
Sbjct: 413 NFTPNVVSWCYLLKAYQKTGNWEKTEEIFHSMLNSG-CPPNEVAWNSLLSAYEKGRQWKR 471
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ EK G+ + ++ I A K + + M++ TY+++I+
Sbjct: 472 VLYTIEKQEELGVKLDVVAWSTTISALAKAGQWQLAEKKIRQMKQSGCQPNIVTYSSLIK 531
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV-RLASKLQIA 423
A+ D+G E F+ M EG++ D+K C L+ YA KV+ + + I
Sbjct: 532 AYGDVGLWNKAESVFKSMLLEGIRPDSKACCALLRAYAKGRQLDKVMFFFDSMMPRYGIK 591
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ Y A+ AC + + M+ C PD+ ++ + Y G DK
Sbjct: 592 PDKYAYAAIFWACWTCGEWQRAADYMENMEAAGCTPDTMIYTTLITMYEAHGQVDK 647
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 150/355 (42%), Gaps = 3/355 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL++F +++Q +P T+ L+V G+ G + A ++F EM E G+ P + L
Sbjct: 226 EALKLFRWMEKQGIERPIY-TFNALMVACGRCGAGDTAVELFEEMKELGLAPDNITFRGL 284
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
++A A +N M+ + ++ + AC A L Q M E+
Sbjct: 285 VSATTAAGKWKAAQSFINLMQA-GGFSFAIGEFTEMQWACARARNSRESLGLLQAMIEQG 343
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P N +L Y K +++ R + + E PD T +++L AN GQ +
Sbjct: 344 CEPRLENYNALLCAYEKTANWEEAVRTVVWIQEKGF-TPDFITWSSLLGACANAGQAEKA 402
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
EK + P ++ L+ AY K ++K + M P +N+++ A
Sbjct: 403 VAVMEKMKENNFTPNVVSWCYLLKAYQKTGNWEKTEEIFHSMLNSGCPPNEVAWNSLLSA 462
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ K + YT E+ G+K D + I+ A AG + +R + N
Sbjct: 463 YEKGRQWKRVLYTIEKQEELGVKLDVVAWSTTISALAKAGQWQLAEKKIRQMKQSGCQPN 522
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+ Y+++I A + E V+K M + RPDS+ + AYAK DKV
Sbjct: 523 IVTYSSLIKAYGDVGLWNKAESVFKSMLLEGIRPDSKACCALLRAYAKGRQLDKV 577
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 163/387 (42%), Gaps = 34/387 (8%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
+ W A +VF + +P L+ +LG + A K+F M ++GIE
Sbjct: 187 RNWDAASRVFRAFRSASV-EPNAHVCTTLIAVLGYGRRLPEALKLFRWMEKQGIERPIYT 245
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+ AL+ A R D A +MK L PD T+ L+ A A +++ ++ M
Sbjct: 246 FNALMVACGRCGAGDTAVELFEEMKEL-GLAPDNITFRGLVSATTAAGKWKAAQSFINLM 304
Query: 242 DERSVTPNTVTQNIVLGGYGKA-GMFDQME-------------RVLSGMLESATCKPDVW 287
GG+ A G F +M+ +L M+E C+P +
Sbjct: 305 QA--------------GGFSFAIGEFTEMQWACARARNSRESLGLLQAMIEQG-CEPRLE 349
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
N +L + + R + G P+ T++ L+GA +K +VME M
Sbjct: 350 NYNALLCAYEKTANWEEAVRTVVWIQEKGFTPDFITWSSLLGACANAGQAEKAVAVMEKM 409
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
++ F ++ +++A+ G+ + E F M G + + L++ Y +
Sbjct: 410 KENNFTPNVVSWCYLLKAYQKTGNWEKTEEIFHSMLNSGCPPNEVAWNSLLSAYEKGRQW 469
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+V+ ++ +L + +V ++ ISA KA E+ ++MK+ C+P+ T+S +
Sbjct: 470 KRVLYTIEKQEELGVKLDVVAWSTTISALAKAGQWQLAEKKIRQMKQSGCQPNIVTYSSL 529
Query: 468 TEAYAKEGMNDKVYALEQEKLQMLLEA 494
+AY G+ +K ++ + MLLE
Sbjct: 530 IKAYGDVGLWNKAESVFK---SMLLEG 553
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 98/259 (37%), Gaps = 38/259 (14%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ V E +KE F P ++ LL K+G E ++F+ M+ G P + +L
Sbjct: 401 KAVAVMEKMKENNF-TPNVVSWCYLLKAYQKTGNWEKTEEIFHSMLNSGCPPNEVAWNSL 459
Query: 186 LAAYCRNSLIDEAFVTLNQMKTL----------------------------------PNC 211
L+AY + T+ + + L C
Sbjct: 460 LSAYEKGRQWKRVLYTIEKQEELGVKLDVVAWSTTISALAKAGQWQLAEKKIRQMKQSGC 519
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
QP++ TYS+LIKA D + E++++ M + P++ +L Y K D++
Sbjct: 520 QPNIVTYSSLIKAYGDVGLWNKAESVFKSMLLEGIRPDSKACCALLRAYAKGRQLDKVMF 579
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
M+ KPD + I G+ + E G P+T + LI Y
Sbjct: 580 FFDSMMPRYGIKPDKYAYAAIFWACWTCGEWQRAADYMENMEAAGCTPDTMIYTTLITMY 639
Query: 332 GKKRMYDKMSSVMEYMRKL 350
DK ME ++K+
Sbjct: 640 EAHGQVDK---AMEILKKM 655
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 5/182 (2%)
Query: 95 KKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLL 154
+++L K AW T+ S QW A + +K Q QP TY L+
Sbjct: 479 QEELGVKLDVVAWSTTI----SALAKAGQWQLAEKKIRQMK-QSGCQPNIVTYSSLIKAY 533
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
G G A VF M+ EGI P + ALL AY + +D+ + M +PD
Sbjct: 534 GDVGLWNKAESVFKSMLLEGIRPDSKACCALLRAYAKGRQLDKVMFFFDSMMPRYGIKPD 593
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
Y Y+ + AC ++ ++M+ TP+T+ ++ Y G D+ +L
Sbjct: 594 KYAYAAIFWACWTCGEWQRAADYMENMEAAGCTPDTMIYTTLITMYEAHGQVDKAMEILK 653
Query: 275 GM 276
M
Sbjct: 654 KM 655
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 79/201 (39%)
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
+ G++ + DV +MN ++ D R + FR+ ++P LI G
Sbjct: 160 IMGVVHETGLRVDVRSMNVVVWQLGQMRNWDAASRVFRAFRSASVEPNAHVCTTLIAVLG 219
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
R + + +M K T+N ++ A G FE+M G+ D
Sbjct: 220 YGRRLPEALKLFRWMEKQGIERPIYTFNALMVACGRCGAGDTAVELFEEMKELGLAPDNI 279
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
TF L++ AG + S + L + + + + AC +A + E + + M
Sbjct: 280 TFRGLVSATTAAGKWKAAQSFINLMQAGGFSFAIGEFTEMQWACARARNSRESLGLLQAM 339
Query: 453 KEKHCRPDSETFSIMTEAYAK 473
E+ C P E ++ + AY K
Sbjct: 340 IEQGCEPRLENYNALLCAYEK 360
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 177/425 (41%), Gaps = 21/425 (4%)
Query: 67 LWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQ 126
L K G+Y E RS +P + L +A K V + FSD +
Sbjct: 315 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSD-------MR 367
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+ V P + ++ L +SG + A FN + E G+ P +YT L+
Sbjct: 368 SRDVV----------PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 417
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
YCR +I A N+M C DV TY+T++ + L+ +M ER++
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQ-QGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P++ T I++ G+ K G + M E + DV T NT+L F G +D +
Sbjct: 477 FPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRI-RLDVVTYNTLLDGFGKVGDIDTAK 535
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ + I P +++IL+ A K + V + M T N++I+ +
Sbjct: 536 EIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGY 595
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ--IAE 424
G+A E E+M +EG D ++ LI G+ K V+ + Q +
Sbjct: 596 CRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVP 655
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
+V YN+++ + + + E E V ++M E+ PD T++ M + + + + +
Sbjct: 656 DVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIH 715
Query: 485 QEKLQ 489
E LQ
Sbjct: 716 DEMLQ 720
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 141/322 (43%), Gaps = 2/322 (0%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L K G+ E +++ E+G+ P Y L++AY L++EAF +N M P
Sbjct: 245 LCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPG-KGFSP 303
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
VYTY+T+I ++E + ++ +M ++P++ T +L K G + E+V
Sbjct: 304 GVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVF 363
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
S M S PD+ ++++S+F G +D ++ + G+ P+ + ILI Y +
Sbjct: 364 SDM-RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
K M ++ M + TYN ++ + F +M + D+ T
Sbjct: 423 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 482
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
LI+G+ G + + + +I +V YN ++ K D+ + ++ M
Sbjct: 483 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 542
Query: 454 EKHCRPDSETFSIMTEAYAKEG 475
K P ++SI+ A +G
Sbjct: 543 SKEILPTPISYSILVNALCSKG 564
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/357 (20%), Positives = 152/357 (42%), Gaps = 4/357 (1%)
Query: 129 QVFEMLKEQPF--YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+ FE++ P + P TY ++ L K G+ E A++VF EM+ G+ P Y +LL
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
C+ + E + M++ + PD+ +S+++ + + + + E +
Sbjct: 348 MEACKKGDVVETEKVFSDMRS-RDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P+ V I++ GY + GM + + ML+ C DV T NTIL + + +
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG-CAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ + + + P++ T ILI + K + + M++ + TYN +++ F
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
+GD + + M ++ + ++ L+N + G + I V
Sbjct: 526 GKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTV 585
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
N++I ++ + + E ++M + PD +++ + + +E K + L
Sbjct: 586 MICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGL 642
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 115/295 (38%), Gaps = 42/295 (14%)
Query: 219 STLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
+ LI + V EL +YQ++ V N T NI++ K G +++ LS + E
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF---GIDPETRTFNILIGAYGKKR 335
PD+ T NT++S +++KG +ME +E G P T+N +I K
Sbjct: 264 KGV-YPDIVTYNTLISAYSSKG---LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHG 319
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE---------- 385
Y++ V M + S+TY +++ GD E F M +
Sbjct: 320 KYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFS 379
Query: 386 -------------------------GMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
G+ D + LI GY G+ ++ +
Sbjct: 380 SMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ 439
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
A +V YN ++ K L E ++++ M E+ PDS T +I+ + + K G
Sbjct: 440 GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 494
>gi|15226907|ref|NP_181058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100538|sp|O82178.1|PP186_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35130
gi|3668091|gb|AAC61823.1| hypothetical protein [Arabidopsis thaliana]
gi|330253974|gb|AEC09068.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 178/407 (43%), Gaps = 39/407 (9%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
L K+W + V E + + +QP + L+ G+ Q + A ++ +++E PT
Sbjct: 131 LNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTE 190
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMK-----------TLPN------------------ 210
+ Y L+ AYC LI+ A V L +M+ T+ N
Sbjct: 191 DTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAID 250
Query: 211 ---------CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
C+P TY+ +I A + + LY +M PN T ++ +
Sbjct: 251 VFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFA 310
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G+ ++ E + + E +PDV+ N ++ ++ G + ++ G +P+
Sbjct: 311 REGLCEKAEEIFEQLQEDGL-EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDR 369
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
++NI++ AYG+ ++ +V E M++L T ++ ++ A+S D E ++
Sbjct: 370 ASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKE 429
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G++ DT ++N Y G F K+ + ++S YN +I+ KA
Sbjct: 430 MSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGF 489
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
L +E ++ +KEK+ RPD T++ AY+++ + K + +E +
Sbjct: 490 LERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMI 536
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 154/345 (44%), Gaps = 5/345 (1%)
Query: 110 TVAETFSDHVLKKQWF--QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
TV + + ++K++ +A+ VF+ +K +P TY ++ L GK+ + ++ K++
Sbjct: 229 TVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRC-KPTTETYNLMINLYGKASKSYMSWKLY 287
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
EM +P YTAL+ A+ R L ++A Q++ +PDVY Y+ L+++
Sbjct: 288 CEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE-DGLEPDVYVYNALMESYSR 346
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
A ++ M P+ + NI++ YG+AG+ E V M + P +
Sbjct: 347 AGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM-KRLGIAPTMK 405
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
+ +LS ++ V E ++ G++P+T N ++ YG+ + KM ++ M
Sbjct: 406 SHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEM 465
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
STYN +I + G + +E F ++ + + D T+ I Y+ L+
Sbjct: 466 ENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLY 525
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
K + A + ++SAC + + ++ V + M
Sbjct: 526 VKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 570
>gi|299471535|emb|CBN80021.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 607
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 161/366 (43%), Gaps = 6/366 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
W +AL+ + +K+ P + + +Y + G+ GQ E A ++ EM EG P Y
Sbjct: 12 DWRKALRAVDGMKKLPGWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPDLSAY 71
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
+A++ A + A L +M T PD +Y I AC R+++ L ++M
Sbjct: 72 SAVIDACAKGGQWKMAVFFLMEMPT-KGIAPDARSYGAAINACARGGRWKIALDLLREML 130
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC--KPDVWTMNTILSVFANKG 300
R VTPN + N + KAG Q E +S + E AT PDV + ++ +S G
Sbjct: 131 ARDVTPNVIIYNSAINSCAKAG---QWEIAVSLVKEMATVGLAPDVISYSSAISACGRGG 187
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+ + +E R G+ P+ T+ I A + + S++ + + +Y+
Sbjct: 188 RWEEALELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYS 247
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+VI A + G K +M A + + T+ I+ A G + + I +R +
Sbjct: 248 SVITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTV 307
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+ +V Y++VI AC K D E + + M P++ +++ +A AK G +
Sbjct: 308 GLPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEA 367
Query: 481 YALEQE 486
L +E
Sbjct: 368 KGLLRE 373
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 138/330 (41%), Gaps = 3/330 (0%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
QW A+ F M P +Y + + G+ ++A + EM+ + P +Y
Sbjct: 83 QWKMAV-FFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDLLREMLARDVTPNVIIY 141
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
+ + + + + A + +M T+ PDV +YS+ I AC R+E L++DM
Sbjct: 142 NSAINSCAKAGQWEIAVSLVKEMATV-GLAPDVISYSSAISACGRGGRWEEALELFEDMR 200
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
V P+ +T + G + + +L + + P+V + +++++ A +GQ
Sbjct: 201 TSGVAPDVITYGSAIAACANGGRWKEAVSLLR-KIPTVGLTPNVISYSSVITACAKEGQW 259
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ + + + P T+N I A K + + ++ M + P +Y++V
Sbjct: 260 KIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSV 319
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I+A S K +M G+ + ++ I+ A G + + +R +
Sbjct: 320 IDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGV 379
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRM 452
+ V YN+ I+AC K + E + + M
Sbjct: 380 TQRVIGYNSAIAACAKGEQWKEALALLREM 409
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 150/370 (40%), Gaps = 15/370 (4%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W +A+ + + P +Y ++ K GQ ++A + EM + P Y
Sbjct: 223 RWKEAVSLLRKIPTVGL-TPNVISYSSVITACAKEGQWKIALDLLREMKAMRLAPNIITY 281
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
A + A + EA L +M T+ PDV +YS++I AC R++ + ++M
Sbjct: 282 NAAIDACAKGGRWKEAIDLLREMPTV-GLPPDVVSYSSVIDACSKGDRWKEAIDILREMP 340
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
++PN ++ N + K G + + + +L M +A V N+ ++ A KG
Sbjct: 341 TVGLSPNAISYNSAIDACAKGGQWKEAKGLLREM-PTAGVTQRVIGYNSAIAACA-KG-- 396
Query: 303 DMMERWYEKFR------NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
E+W E G+ +++ I A GK ++ K ++ M +
Sbjct: 397 ---EQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVGLAPNE 453
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
YN+ I+A + +M G+ D ++ I A + + ++ ++
Sbjct: 454 VCYNSAIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKE 513
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
S +A ++ YN+ I AC K + M+ P+ ++S +A + G
Sbjct: 514 MSAAGLAPDLICYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNIISYSSAIDACVRGGQ 573
Query: 477 NDKVYALEQE 486
+ AL +E
Sbjct: 574 WKEGIALLEE 583
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/405 (20%), Positives = 150/405 (37%), Gaps = 50/405 (12%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
QW A+ + + + P +Y + G+ G+ E A ++F +M G+ P Y
Sbjct: 153 QWEIAVSLVKEMATVGL-APDVISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVITY 211
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
+ +AA EA L ++ T+ P+V +YS++I AC ++++ L ++M
Sbjct: 212 GSAIAACANGGRWKEAVSLLRKIPTV-GLTPNVISYSSVITACAKEGQWKIALDLLREMK 270
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
+ PN +T N + K G + + +L M + PDV + ++++ +KG
Sbjct: 271 AMRLAPNIITYNAAIDACAKGGRWKEAIDLLREM-PTVGLPPDVVSYSSVIDA-CSKG-- 326
Query: 303 DMMERWYEKFR------NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
+RW E G+ P ++N I A K + + ++ M
Sbjct: 327 ---DRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRV 383
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
YN+ I A + K +M G+ ++ I+ L+ K +R
Sbjct: 384 IGYNSAIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLRE 443
Query: 417 ASKLQIAENVSFYNAVI-----------------------------------SACIKADD 441
+ + +A N YN+ I +AC K D
Sbjct: 444 MATVGLAPNEVCYNSAIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQ 503
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
E V K M PD ++ +A +K G AL E
Sbjct: 504 WKEALAVLKEMSAAGLAPDLICYNSAIDACSKGGRWKMAVALLGE 548
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 119/314 (37%), Gaps = 39/314 (12%)
Query: 129 QVFEMLKEQPF--YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+ ++L+E P P +Y + K GQ + A+ + EM G+ Y + +
Sbjct: 331 EAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAI 390
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
AA + EA L +M T+ V++YS+ I AC + + L ++M +
Sbjct: 391 AACAKGEQWKEALALLREMPTV-GLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVGL 449
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PN V N + G+ DQ E VD++
Sbjct: 450 APNEVCYNSAIDACGRG---DQWEEA-----------------------------VDLLR 477
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ G+ P+ +++ I A K + + +V++ M YN+ I+A
Sbjct: 478 ----EMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMSAAGLAPDLICYNSAIDAC 533
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
S G K +M A G+ + ++ I+ G + + I+ + + +V
Sbjct: 534 SKGGRWKMAVALLGEMRAAGLTPNIISYSSAIDACVRGGQWKEGIALLEEMRGSGVVPDV 593
Query: 427 SFYNAVISACIKAD 440
Y+A++ C K D
Sbjct: 594 ITYHALMVTCAKYD 607
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 148/334 (44%), Gaps = 21/334 (6%)
Query: 159 QPELARKVFNEMVEEG---IEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
+ EL +FN M+ E + P P Y+ L+ +CR ++ F T + + +
Sbjct: 71 ESELVVSLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILK-SGWRVNN 129
Query: 216 YTYSTLIKACVDAMRF-ELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
+ L+K DA R E ++ L + M E TP+ V+ N +L G+ ++ +L
Sbjct: 130 IVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLH 189
Query: 275 GMLESA--TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
M +S +C P+V + +++ F +GQVD + + + GI P T+ +I
Sbjct: 190 MMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLC 249
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K ++ D+ V + M + TYN +I + +G K + E+M A G+K D
Sbjct: 250 KAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCY 309
Query: 393 TFCCLINGYANAG-------LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
T+ L+N N G LF +I + I NV+ Y +I L EM
Sbjct: 310 TYGSLLNYLCNNGRCREARFLFDSMI-------RKGIKPNVAIYGILIHGYATKGALSEM 362
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ M E PD F+I+ AYAK+ M D+
Sbjct: 363 HDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDE 396
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/418 (22%), Positives = 166/418 (39%), Gaps = 42/418 (10%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQ--PKEGTYMKLLVLLGKSGQPELARKV 166
NT+ + F + +K+ +AL++ M+ + P +Y ++ GQ + A +
Sbjct: 169 NTLLKGFCN---EKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNL 225
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
F EM++ GI+P YT ++ C+ ++D A QM +PD TY+ LI +
Sbjct: 226 FLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMID-KGVKPDNDTYNCLIHGYL 284
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
+++ + + ++M + P+ T +L G + + M+ KP+V
Sbjct: 285 SIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGI-KPNV 343
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
++ +A KG + M G+ P+ FNI+ AY KK M D+ +
Sbjct: 344 AIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNK 403
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M++ Y +I+A +G F QM EG+ + F L+ G
Sbjct: 404 MKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDK 463
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVI------SACIKADDLME-MERV--------YKR 451
+ K I +V F+N ++ +KA L++ MERV Y
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTT 523
Query: 452 MKEKHC--------------------RPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ HC +PD T++ + Y + G D Y + +E L+
Sbjct: 524 LIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLR 581
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/393 (20%), Positives = 157/393 (39%), Gaps = 22/393 (5%)
Query: 115 FSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG 174
F+ + K +A+ +F +K+Q P Y L+ L K G+ + A FN+M+ EG
Sbjct: 385 FTAYAKKAMIDEAMHIFNKMKQQGL-SPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEG 443
Query: 175 IEPTPELYTALLAAYCRNSLIDEA----FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMR 230
+ P ++ +L+ C ++A F LNQ +PDV ++T++ +
Sbjct: 444 VAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQ-----GIRPDVVFFNTILCNLCTKGQ 498
Query: 231 FELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMN 290
+ L M+ P ++ ++GG+ G D+ + L ML S KPD WT N
Sbjct: 499 VMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVML-SVGLKPDEWTYN 557
Query: 291 TILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
T+L + G++D + + GI P T++ ++ R + + + M
Sbjct: 558 TLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITS 617
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
W YN ++ S F+ + ++ + + TF +I +G
Sbjct: 618 GKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDA 677
Query: 411 ISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
+ S + +V Y + I+ L E + ++ M++ P+S + +
Sbjct: 678 MHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRR 737
Query: 471 YAKEG-----------MNDKVYALEQEKLQMLL 492
G +++K ++LE ML+
Sbjct: 738 LLHRGDITRAGAYLCKLDEKNFSLEASTTAMLI 770
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 174/393 (44%), Gaps = 35/393 (8%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+++F +KE P Y +L L + ++ V+ +M +G EP Y L
Sbjct: 129 RAVEMFYRIKEFG-CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVL 187
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD----------AMRFELIE 235
L A C+N+ +D A L +M C PD +Y+T+I + + A RFE +
Sbjct: 188 LKALCKNNKVDGAKKLLVEMSN-KGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVV 246
Query: 236 TLY--------------------QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
++Y ++M E+ ++PN ++ + ++ +G + L+
Sbjct: 247 SVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306
Query: 276 MLESATCKPDVWTMNTIL-SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
ML+ C P+++T+++++ F D ++ W + R FG+ P +N L+ +
Sbjct: 307 MLKRG-CHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSH 365
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
K SV +M ++ TY ++I F+ G Y + +M G + +
Sbjct: 366 GNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVY 425
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
++ F + S + + SK A +V +NA I A L E+V+++M++
Sbjct: 426 TNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQ 485
Query: 455 KH-CRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+H C P+ T++ + + AK ++ Y L +E
Sbjct: 486 QHRCPPNIVTYNELLDGLAKANRIEEAYGLTRE 518
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 154/398 (38%), Gaps = 51/398 (12%)
Query: 94 LKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVL 153
L + L+R + T++ L+ F AL ++ + QP Y L+
Sbjct: 304 LTQMLKRGCHPNIY--TLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQG 361
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
G A VF+ M E G P Y +L+ + + +D A N+M T C P
Sbjct: 362 FCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLT-SGCCP 420
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
+V Y+ +++A +F+ E+L + M + + P+ T N + G AG D E+V
Sbjct: 421 NVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVF 480
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
M + C P++ T N +L A +++ AYG
Sbjct: 481 RQMEQQHRCPPNIVTYNELLDGLAKANRIE-------------------------EAYGL 515
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
R +MR ++ W+SSTYN ++ + G +M +G D T
Sbjct: 516 TREI--------FMRGVE--WSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEIT 565
Query: 394 FCCLINGYANAGLFHKVISSVRLAS---KLQIAENVSFYNAVISAC---IKADDLMEMER 447
+I Y G + + L S + + +S+ N + C + D ++ +E
Sbjct: 566 MNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLE- 624
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
RM P T+S++ + ++D V A +Q
Sbjct: 625 ---RMISAGIVPSIATWSVLINCFI---LDDIVRAHDQ 656
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 96/228 (42%), Gaps = 10/228 (4%)
Query: 264 GMFDQMERVLSGM-LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETR 322
G D ++ +L M L+ C D++ +++SV+ G + + + + FG DP +
Sbjct: 90 GQVDSVQYLLQQMKLQGFHCSEDLFI--SVISVYRQVGLAERAVEMFYRIKEFGCDPSVK 147
Query: 323 TFN-ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+N +L G+ R+ + V M++ F TYN +++A + +
Sbjct: 148 IYNHVLDTLLGENRI-QMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVE 206
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M +G D ++ +I+ GL V LA + + VS YNA+I+ K D
Sbjct: 207 MSNKGCCPDAVSYTTVISSMCEVGL---VKEGRELAERFEPV--VSVYNALINGLCKEHD 261
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ + M EK P+ ++S + G + ++ + L+
Sbjct: 262 YKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLK 309
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 60/139 (43%), Gaps = 3/139 (2%)
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
F T T+ +I + G ++Y +QM +G F +I+ Y GL + +
Sbjct: 72 FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV 131
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
+ +V YN V+ + + + + VY+ MK P+ T++++ +A
Sbjct: 132 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 191
Query: 472 AKEGMNDKVYALEQEKLQM 490
K N+KV ++ ++M
Sbjct: 192 CK---NNKVDGAKKLLVEM 207
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 158/350 (45%), Gaps = 3/350 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL+ + + Q F E TY L+ L K G A ++ ++M + + P +Y +
Sbjct: 166 KALEFHDSVVAQGFLL-DEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMI 224
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C++ L+ EA L PDV+TY+ LI ++ + L DM +R+
Sbjct: 225 VDGLCKDGLVTEA-RDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRN 283
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
V N T NI++ K GM + + + M+E +PD+ T NT++S + V
Sbjct: 284 VNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQ-RPDLVTFNTLMSGYCLYNDVVEA 342
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ ++ F GI P+ ++NILI Y K D+ S+ M + TY+++I+
Sbjct: 343 RKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDG 402
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
G + F +H G + T+ +++ L K I L + + N
Sbjct: 403 LCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPN 462
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
VS YN +I+ K+ + E +++ M ++ PDS T++ + + K G
Sbjct: 463 VSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSG 512
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 109/259 (42%), Gaps = 6/259 (2%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ L K G A + N M+E G P + L++ YC + + EA
Sbjct: 290 TYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEA---RKLF 346
Query: 206 KTLPNC--QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKA 263
T C PDV++Y+ LI R + +L+ M+ + + PN VT + ++ G K+
Sbjct: 347 DTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKS 406
Query: 264 GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
G + S + + P+V T N +L VD + G+ P +
Sbjct: 407 GRISYAWELFSAIHDGGP-SPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSS 465
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
+NILI Y K + D+ ++ E M + S TYN +I+ G H F MH
Sbjct: 466 YNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMH 525
Query: 384 AEGMKADTKTFCCLINGYA 402
G D T+ L + ++
Sbjct: 526 DGGPPVDVITYNILFDAFS 544
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 112/278 (40%), Gaps = 2/278 (0%)
Query: 195 IDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQN 254
ID+A ++ T+ + P V ++ ++ + V + +L + M R +TP+ VT +
Sbjct: 59 IDDAVALFTRLITM-HPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLS 117
Query: 255 IVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRN 314
I++ Y G VL GM+ + + T+ TI+ G+V +++
Sbjct: 118 ILINCYCHLGHMGFAFSVL-GMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVA 176
Query: 315 FGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKH 374
G + T+ LI K + + ++ M YN +++ G
Sbjct: 177 QGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTE 236
Query: 375 MEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVIS 434
+ + G+ D T+ CLI+G+ G + +V + + NV YN +I
Sbjct: 237 ARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILID 296
Query: 435 ACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
A K L + + M E+ RPD TF+ + Y
Sbjct: 297 ALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYC 334
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 61/160 (38%)
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
GI P T +ILI Y SV+ + K + + T +++ G+ +
Sbjct: 108 GITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKA 167
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
+ + A+G D T+ LING GL + + + NV YN ++
Sbjct: 168 LEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDG 227
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
K + E +Y + + PD T++ + + G
Sbjct: 228 LCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLG 267
>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 671
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 158/359 (44%), Gaps = 14/359 (3%)
Query: 122 KQWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+QW A + EM++ P E T+ + ++G + A ++ + M + G P
Sbjct: 226 RQWEDAEALMAEMVRNH--CPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVV 283
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
+Y+ L+ + +D+A LN M C+P+ Y+ +K A R+E + L +
Sbjct: 284 IYSTLVNGFSEQGRVDDAIELLNGML----CKPNTICYNAALKGLCIAQRWEDVGQLIVE 339
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M + PN T +++ + G+ D VL M C+PD NT++ F+ +G
Sbjct: 340 MVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQM-HKYGCRPDAVIYNTLIYSFSEQG 398
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+VD + + P+ +FN + + +D ++ M + P T+N
Sbjct: 399 RVD---DALKLLNSMPCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFN 455
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+I++ G + FEQM G D T+ LING + GL V S++ L +
Sbjct: 456 ILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGL---VESAIELFQSM 512
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
++ YNAV+ +A + + M K C P+ TF+I+ + ++G+ D+
Sbjct: 513 PCKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDR 571
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 153/359 (42%), Gaps = 14/359 (3%)
Query: 119 VLKKQWFQALQ-VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
+ ++W Q + EM+++ P E T+ L L ++G + A +V +M + G P
Sbjct: 325 CIAQRWEDVGQLIVEMVRKDCL--PNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRP 382
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
+Y L+ ++ +D+A LN M C PDV +++ +K A R++ E L
Sbjct: 383 DAVIYNTLIYSFSEQGRVDDALKLLNSMP----CSPDVISFNAALKGLCRAERWDDAEEL 438
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
M +T NI++ + G + V M + C PD+ T +++++ +
Sbjct: 439 IVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYG-CTPDIVTYSSLINGLS 497
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+G ++E E F++ P+ +N ++ + ++ ++ M + P
Sbjct: 498 EQG---LVESAIELFQSMPCKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEI 554
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
T+N +I + G FEQM G D T+ LING++ G ++ + RL
Sbjct: 555 TFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQG---RLDDARRLL 611
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
S + + YN+ + +A+ E E V M C P+ TF + G+
Sbjct: 612 STMSCKPDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPNEVTFKYANRLFVPNGV 670
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 138/306 (45%), Gaps = 14/306 (4%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
YT L+ YCR+ + +A + M PD YTY+T++ A ++E E L +M
Sbjct: 183 YTTLINGYCRSGRLADALALIASMPV----APDTYTYNTVLMGLCGARQWEDAEALMAEM 238
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
PN VT + + + G+ D+ ++L M + C PDV +T+++ F+ +G+
Sbjct: 239 VRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYG-CTPDVVIYSTLVNGFSEQGR 297
Query: 302 VDMMERWYEKFRNFGIDPETRTFN-ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
VD E P T +N L G +R D ++E +RK P +T++
Sbjct: 298 VD---DAIELLNGMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLP-NEATFS 353
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+ G EQMH G + D + LI ++ G +V +++L + +
Sbjct: 354 MLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQG---RVDDALKLLNSM 410
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDK 479
+ +V +NA + +A+ + E + +M + C TF+I+ ++ + G +N+
Sbjct: 411 PCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNA 470
Query: 480 VYALEQ 485
+ EQ
Sbjct: 471 IEVFEQ 476
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
T+ LINGY +G ++ ++ L + + +A + YN V+ A + E + M
Sbjct: 182 TYTTLINGYCRSG---RLADALALIASMPVAPDTYTYNTVLMGLCGARQWEDAEALMAEM 238
Query: 453 KEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
HC P+ TF+ A+ + G+ D+ L
Sbjct: 239 VRNHCPPNEVTFATQIRAFCQNGLLDRAVQL 269
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 159/382 (41%), Gaps = 37/382 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNS-------- 193
P T+ ++ L G+ A +V +EM +G P P +Y +L A CR+
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 194 ---------------------------LIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
+DEA L ++ C+ D+ +Y+ ++K
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFF-GCEADIVSYNAVLKGLC 227
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
A R+ +E L +M PN VT N ++G + G+F+++ VL+ M E C PD+
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG-CTPDI 286
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
TI+ +G +++ + ++G+ P +N ++ + + ++
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M + P T+N +++ F G + EQM + G D T+ +ING+ GL
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL 406
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ + ++ S N Y V+ A ++ E + +M ++ C P+ TF+
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNT 466
Query: 467 MTEAYAKEGMNDKVYALEQEKL 488
+ K+G+ ++ L ++ L
Sbjct: 467 LINFLCKKGLVEQAIELLKQML 488
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 162/361 (44%), Gaps = 5/361 (1%)
Query: 120 LKKQWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPT 178
+ K+W ++ EM++ P T+ L+ L ++G E +V +M E G P
Sbjct: 228 MAKRWGDVEELMDEMVRVD--CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285
Query: 179 PELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
+Y ++ C+ ++ A LN+M + +P+V Y+T++K A R++ E L
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSY-GLKPNVVCYNTVLKGLCSAERWKEAEELL 344
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
+M ++ + VT NI++ + + G+ D++ +L ML S C PDV T T+++ F
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML-SHGCMPDVITYTTVINGFCK 403
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
+G +D + + G P T ++ I++ + +M M + P T
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
+N +I G + +QM G D ++ +I+G AG + + + +
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
I+ N Y+++ A + + ++ +++ +K+ R D+ ++ + + K D
Sbjct: 524 NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETD 583
Query: 479 K 479
+
Sbjct: 584 R 584
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 159/382 (41%), Gaps = 37/382 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNS-------- 193
P T+ ++ L G+ A +V +EM +G P P +Y +L A CR+
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 194 ---------------------------LIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
+DEA L ++ C+ D+ +Y+ ++K
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFF-GCEADIVSYNAVLKGLC 227
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
A R+ +E L +M PN VT N ++G + G+F+++ VL+ M E C PD+
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG-CTPDI 286
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
TI+ +G +++ + ++G+ P +N ++ + + ++
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M + P T+N +++ F G + EQM + G D T+ +ING+ GL
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL 406
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ + ++ S N Y V+ A ++ E + +M ++ C P+ TF+
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNT 466
Query: 467 MTEAYAKEGMNDKVYALEQEKL 488
+ K+G+ ++ L ++ L
Sbjct: 467 LINFLCKKGLVEQAIELLKQML 488
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 162/361 (44%), Gaps = 5/361 (1%)
Query: 120 LKKQWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPT 178
+ K+W ++ EM++ P T+ L+ L ++G E +V +M E G P
Sbjct: 228 MAKRWGDVEELMDEMVRVD--CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285
Query: 179 PELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
+Y ++ C+ ++ A LN+M + +P+V Y+T++K A R++ E L
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSY-GLKPNVVCYNTVLKGLCSAERWKEAEELL 344
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
+M ++ + VT NI++ + + G+ D++ +L ML S C PDV T T+++ F
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML-SHGCMPDVITYTTVINGFCK 403
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
+G +D + + G P T ++ I++ + +M M + P T
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
+N +I G + +QM G D ++ +I+G AG + + + +
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
I+ N Y+++ A + + ++ +++ +K+ R D+ ++ + + K D
Sbjct: 524 NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETD 583
Query: 479 K 479
+
Sbjct: 584 R 584
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 171/386 (44%), Gaps = 7/386 (1%)
Query: 92 KNLKKKLERKAKAKAWV--NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMK 149
K + +++RK + V N + TF K + AL+VFE L + +P TY
Sbjct: 64 KTVLDRMKRKGFSPDVVTHNIMIGTFCG---KGKIDLALKVFEELLKDNNCKPTLITYTI 120
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
L+ G + A K+ +EM+ G+EP Y + C+ +D AF + + +
Sbjct: 121 LIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNS-R 179
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
C+PDV TY+ L++A ++ +++ E ++ R PN VT +I++ + G ++
Sbjct: 180 GCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEES 239
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
++ M E PD + + +++ F +G++DM + + G P+ +N ++
Sbjct: 240 VNLVKVMKEKGL-TPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMA 298
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
A K D + + ++ P S+YN ++ A GD QM ++G+
Sbjct: 299 ALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDP 358
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
D T+ LI+ G+ + I + + N+ Y V+ KA + + V
Sbjct: 359 DVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVL 418
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEG 475
M E C+P+ T++++ E G
Sbjct: 419 AAMIENGCQPNETTYTLLIEGIGFSG 444
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 164/377 (43%), Gaps = 9/377 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A +V +L++ +P Y ++ K+ + E A+ V + M +G P + +
Sbjct: 28 KATRVMGILEKHG--KPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIM 85
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +C ID A ++ NC+P + TY+ LI+A + + L +M R
Sbjct: 86 IGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRG 145
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+T T N++ G K G D+ + L S CKPDV T N +L N+G+ D
Sbjct: 146 LEPDTFTYNVITRGLCKEGKVDRAFEFVR-TLNSRGCKPDVITYNILLRALLNQGKWDEG 204
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E+W + + G +P T++ILI + + ++ ++++ M++ + Y+ +I A
Sbjct: 205 EKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAA 264
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
F G + M +G D + ++ G + ++ N
Sbjct: 265 FCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPN 324
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
VS YN ++SA + D + +M K PD T++ + ++GM D+ L
Sbjct: 325 VSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLA 384
Query: 486 EKLQMLLEASGHWQQNI 502
+ L SG +Q NI
Sbjct: 385 DML------SGRFQPNI 395
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 138/312 (44%), Gaps = 8/312 (2%)
Query: 170 MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM 229
MV + +P L T L+ + + ID+A + ++ + +PDV+ Y+ +I A
Sbjct: 1 MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEK--HGKPDVFAYNAVISGFCKAN 58
Query: 230 RFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM 289
R E +T+ M + +P+ VT NI++G + G D +V +L+ CKP + T
Sbjct: 59 RIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITY 118
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
++ + +G +D + ++ + G++P+T T+N++ K+ D+ E++R
Sbjct: 119 TILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDR---AFEFVRT 175
Query: 350 LQFPWTSS---TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
L TYN ++ A + G E ++ + G + + T+ LI+ G
Sbjct: 176 LNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGK 235
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ ++ V++ + + + Y+ +I+A + L M PD ++
Sbjct: 236 IEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNT 295
Query: 467 MTEAYAKEGMND 478
+ A K G D
Sbjct: 296 IMAALCKNGNGD 307
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 131/278 (47%), Gaps = 3/278 (1%)
Query: 213 PDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
P+VYTY+ L++A C R E + L +DM PN VT N ++ + +AG D ER
Sbjct: 188 PNVYTYNILVRALCGRGHRKEALSIL-RDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAER 246
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
L GM+ KP++ T N++++ G+++ + +++ G+ P+ ++N L+G Y
Sbjct: 247 -LVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGY 305
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
K + SV M + T+ ++I G+ + QM G++ +
Sbjct: 306 CKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNE 365
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
TF LI+G+ G + +VR + +I +V YNA+I+ + E +
Sbjct: 366 VTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHE 425
Query: 452 MKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
M+ K +PD T+S + AY K + L Q+ L+
Sbjct: 426 MEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLE 463
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 128/553 (23%), Positives = 222/553 (40%), Gaps = 92/553 (16%)
Query: 16 LLPSPLPHPHDTKTNKHRAQVPNFNLIHC-------------SVTSTNKHTSFSSESAVA 62
LLPS P P D+ K A +PN + SV + N S++++
Sbjct: 114 LLPSSPPRPFDSLI-KSYASLPNRASLAAAALAFARSAGYVPSVLAYNAVLLALSDASLT 172
Query: 63 AKKRLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHV--- 119
+ +R + GV+ P + ++ L + RK + +V
Sbjct: 173 SARRFFDSMLSDGVA----PNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTY 228
Query: 120 --LKKQWFQALQV------FEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMV 171
L +F+A +V M++E +P T+ ++ + K+G+ E ARKVF+EMV
Sbjct: 229 NTLVAAFFRAGEVDGAERLVGMMREGGL-KPNLVTFNSMVNGMCKAGKMEDARKVFDEMV 287
Query: 172 EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRF 231
EG+ P Y L+ YC+ EA +M T PDV T+++LI A
Sbjct: 288 REGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEM-TQKGIMPDVVTFTSLIHVMCKAGNL 346
Query: 232 ELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNT 291
E TL + M ER + N VT ++ G+ K G D + GM + KP V N
Sbjct: 347 ERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM-KQCRIKPSVVCYNA 405
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY-------------------- 331
+++ + G++D + G+ P+ T++ +I AY
Sbjct: 406 LINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG 465
Query: 332 ----------------GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G+KR+ D + + M KL TY ++I+ G+ +
Sbjct: 466 VLPDAITYSSLIRVLCGEKRLSDA-HVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESA 524
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL----QIAENVSFYNA 431
++M G+ D T+ LING + + + + + +L KL I N Y+A
Sbjct: 525 LSLHDKMVKAGVLPDVVTYSVLINGLSKSA---RAMEAQQLLFKLYHEDPIPANTK-YDA 580
Query: 432 VISACIKAD--------------DLM-EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
++ C KA+ LM E ++VY+ M +++ D +S++ + + G
Sbjct: 581 LMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGN 640
Query: 477 NDKVYALEQEKLQ 489
K + ++ LQ
Sbjct: 641 VMKALSFHKQMLQ 653
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/408 (19%), Positives = 161/408 (39%), Gaps = 59/408 (14%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL VF + ++ P T+ L+ ++ K+G E A + +M E G++ +TAL
Sbjct: 313 EALSVFAEMTQKGI-MPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTAL 371
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +C+ +D+A + + MK +P V Y+ LI R + L +M+ +
Sbjct: 372 IDGFCKKGFLDDALLAVRGMKQC-RIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG 430
Query: 246 VTPNTVTQNIVLGGYGK----------------------AGMFDQMERVLSG--MLESA- 280
+ P+ VT + ++ Y K A + + RVL G L A
Sbjct: 431 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAH 490
Query: 281 ---------TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+PD +T +++ +G V+ ++K G+ P+ T+++LI
Sbjct: 491 VLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGL 550
Query: 332 GKK-----------RMYD--------KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
K ++Y K ++M RK + + +++ F G
Sbjct: 551 SKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLA----LLKGFCMKGLM 606
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAV 432
+ ++ M D + LI+G+ AG K +S + + A N + ++
Sbjct: 607 NEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISL 666
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
I + ++E ++V +++ D+E + + EG D V
Sbjct: 667 IRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAV 714
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 153/335 (45%), Gaps = 2/335 (0%)
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
K L + K Q + N+M G+ L+ + CR S I A L++M L
Sbjct: 91 KFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKL 150
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
QPD T++TLI + R + L+ +M R PNTVT I++ K GM +
Sbjct: 151 -GIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSE 209
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
V M E +P+++T N +++ + + +++ + +E G P +++ILI
Sbjct: 210 ARCVFETMTEKGV-EPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILI 268
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
Y K R D+ +++ M + + + TYN +++ + F++M + GM
Sbjct: 269 NGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGML 328
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
+ +T+ L++G G + + + + ++ ++ YN +I A L + +
Sbjct: 329 PNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKEL 388
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ ++ RP T++IM + KEG++D+ Y L
Sbjct: 389 FSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKL 423
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 154/343 (44%), Gaps = 6/343 (1%)
Query: 60 AVAAKKRLWKEGEYP-GVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDH 118
AV+ +++K G P V+ T++ IK + A A NTV T
Sbjct: 140 AVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVD 199
Query: 119 VLKKQWF--QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIE 176
VL K+ +A VFE + E+ +P TY L+ + A KVF MV +G
Sbjct: 200 VLCKKGMVSEARCVFETMTEKG-VEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCA 258
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
P+ Y+ L+ YC++ IDEA L QM P+ TY+TL++ A +
Sbjct: 259 PSVHSYSILINGYCKSRRIDEAKALLTQMSE-KELIPNTVTYNTLMQGLCHASSLLEAQE 317
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
L++ M + PN T +I+L G K G ++ ++L+ M E +PD+ N ++
Sbjct: 318 LFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKL-EPDIVLYNILIQGM 376
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
G++++ + + K GI P RT+NI+I K+ + D+ + M F S
Sbjct: 377 FIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDS 436
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+YN +I+ F D ++M AD+ TF L++
Sbjct: 437 CSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 119/284 (41%), Gaps = 8/284 (2%)
Query: 195 IDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQN 254
ID+A + +M + N +P + + ++ + +L MD V N T N
Sbjct: 67 IDDAMASFYRMIHM-NPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLN 125
Query: 255 IVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRN 314
I++ + VLS M + +PD T T+++ N+G++ + +
Sbjct: 126 ILINSLCRLSHIHFAVSVLSKMFKLGI-QPDSVTFTTLINGLCNEGRIKEAVELFNEMAG 184
Query: 315 FGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS---DMGD 371
P T TF IL+ KK M + V E M + TYN ++ + +M D
Sbjct: 185 RDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMND 244
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNA 431
A + FE M +G ++ LINGY + + + + S+ ++ N YN
Sbjct: 245 ASKV---FEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNT 301
Query: 432 VISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++ A L+E + ++K+M P+ T+SI+ + K G
Sbjct: 302 LMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHG 345
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 161/340 (47%), Gaps = 8/340 (2%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL L K G+ A +V +V G+ PT +Y L+ YC+ + AF QMK+
Sbjct: 162 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKS-R 220
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+ +PD TY+ LI E L +M++ V P+ T N ++ YG AG ++
Sbjct: 221 HIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC 280
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
VLS M + K DV + +++ F G++ + + P + +N +I
Sbjct: 281 FTVLSDMQQKGI-KSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIID 339
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF---SDMGDAKHMEYTFEQMHAEG 386
AY + ++ ++E M+ + TYN +++ S + +A+ + YT +G
Sbjct: 340 AYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRN---QG 396
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
++ D ++ +I+ N G K + ++ +K I + Y+ ++SA A + +ME
Sbjct: 397 LRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDME 456
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+Y++M K+ P S + IM +AY + + KV +L++E
Sbjct: 457 CLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKE 496
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 146/342 (42%), Gaps = 2/342 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P +Y ++ L +SG+ A KVF+EMV+ G+ P Y ++ + + ++ F
Sbjct: 14 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+QM +P++ TY+ L+ A R + L +M S+ P+ T +I+ G
Sbjct: 74 RDQMLH-DGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLT 132
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G M + + L+ +T + +L+ G+V E+ E + G+ P T
Sbjct: 133 RTGESRTMLSLFAESLKKGV-MLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTT 191
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+N LI Y + R + E M+ TYN +I + E +
Sbjct: 192 VIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVME 251
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G+ +TF LI+ Y AG K + + + I +V + +V+ A K
Sbjct: 252 MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 311
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ E + M K P+++ ++ + +AY + G ++ + L
Sbjct: 312 IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLL 353
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 118/259 (45%), Gaps = 11/259 (4%)
Query: 117 DHVLKKQWFQALQVFEMLK---------EQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
DH+ L EM+ E+ P T+ L+ G +GQ E V
Sbjct: 225 DHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVL 284
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
++M ++GI+ + +++ A+C+N I EA L+ M + P+ Y+++I A ++
Sbjct: 285 SDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDM-IYKDVAPNAQVYNSIIDAYIE 343
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
+ E L + M V+ + VT N++L G ++ D+ E ++ L + +PDV
Sbjct: 344 SGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIY-TLRNQGLRPDVV 402
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
+ NTI+S NKG D ++ +GI P RT++ L+ A M + + M
Sbjct: 403 SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQM 462
Query: 348 RKLQFPWTSSTYNNVIEAF 366
+SS Y +++A+
Sbjct: 463 LHKNVEPSSSIYGIMVDAY 481
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 123/276 (44%), Gaps = 3/276 (1%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A +FE +K + +P TY L+ L K A + EM + G++P+ E + L+
Sbjct: 210 AFCIFEQMKSRHI-RPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLI 268
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
AY +++ F L+ M+ + DV ++ +++KA + + DM + V
Sbjct: 269 DAYGTAGQLEKCFTVLSDMQQ-KGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDV 327
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PN N ++ Y ++G +Q ++ M S + T N +L Q+D E
Sbjct: 328 APNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGV-SASIVTYNLLLKGLCRSSQIDEAE 386
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
RN G+ P+ ++N +I A K DK +++ M K T TY+ ++ A
Sbjct: 387 ELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSAL 446
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+ G ME ++QM + ++ + + +++ Y
Sbjct: 447 ASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYV 482
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 125/301 (41%), Gaps = 4/301 (1%)
Query: 177 PTPEL--YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELI 234
P P+ Y ++A R+ +A ++M + P+ TY+T+I V E
Sbjct: 12 PPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDM-GVVPNWITYNTMIDGHVKGGDLEAG 70
Query: 235 ETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILS 294
L M PN VT N++L G +AG D+ RVL + S + PD +T + +
Sbjct: 71 FRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDE-TRVLMDEMASHSMFPDGFTYSILFD 129
Query: 295 VFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 354
G+ M + + G+ T +IL+ K K V+E +
Sbjct: 130 GLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVP 189
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
T+ YN +I + + D + FEQM + ++ D T+ LING + K V
Sbjct: 190 TTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLV 249
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
K + +V +N +I A A L + V M++K + D +F + +A+ K
Sbjct: 250 MEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKN 309
Query: 475 G 475
G
Sbjct: 310 G 310
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 104/249 (41%), Gaps = 6/249 (2%)
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMER 307
P+ + N+V+ G ++G +V M++ P+ T NT++ G ++ R
Sbjct: 14 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVV-PNWITYNTMIDGHVKGGDLEAGFR 72
Query: 308 WYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS 367
++ + G P T+N+L+ + D+ +M+ M TY+ + + +
Sbjct: 73 LRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLT 132
Query: 368 DMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVS 427
G+++ M F + +G+ T L+NG G K + + +
Sbjct: 133 RTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTV 192
Query: 428 FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEK 487
YN +I+ + DL ++++MK +H RPD T++ + K M K E
Sbjct: 193 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKA-----ED 247
Query: 488 LQMLLEASG 496
L M +E SG
Sbjct: 248 LVMEMEKSG 256
>gi|297737146|emb|CBI26347.3| unnamed protein product [Vitis vinifera]
Length = 862
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 178/401 (44%), Gaps = 21/401 (5%)
Query: 81 IPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQ--WFQALQVFEMLKEQP 138
IP +K+L + L W +++ +LK+Q W +AL++FE LK++
Sbjct: 137 IPSILRALETVKDLDEAL------SPWEESLSNKERSIILKEQSCWERALEIFEWLKKKG 190
Query: 139 FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA 198
Y+ Y +L +LGK+ + +++EM+ GI P Y L+ Y + L +EA
Sbjct: 191 CYELNVIHYNIMLRILGKARKWHHVESLWDEMMSRGITPVNSTYGTLIDVYSKGGLTEEA 250
Query: 199 FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS-----VTPNTVTQ 253
L++M +PD T +++ A F+ E +++ S V ++ T
Sbjct: 251 LHWLDRMNK-QGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLESASQPHVCLSSYTY 309
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
N ++ YGKAG + + ML P+ T NT++ + N GQ++ +K
Sbjct: 310 NTLIDTYGKAGQLREASDTFAWMLREGII-PNTVTFNTMIHICGNHGQLEEAASLMQKME 368
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
P+TRT+NILI + K D+ +S + M++ + +Y ++ AFS
Sbjct: 369 ELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMKEARLEPDLVSYRTLLYAFSIRHLVG 428
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVS--FYNA 431
E +M G++ D T L Y AG+ K R + + N+S Y+A
Sbjct: 429 EAEILVSEMDERGLEIDEFTQSALTRMYIEAGMLKKSWLWFR---RFHLEGNMSSECYSA 485
Query: 432 VISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
I A + ++E E+ + KE + F++M +AY
Sbjct: 486 NIDAYGERGHILEAEKAFLCCKESR-KLSVLEFNVMIKAYG 525
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 160/401 (39%), Gaps = 39/401 (9%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
NT+ +T+ Q +A F ML+E P T+ ++ + G GQ E A +
Sbjct: 310 NTLIDTYGK---AGQLREASDTFAWMLREGII--PNTVTFNTMIHICGNHGQLEEAASLM 364
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
+M E P Y L++ + +++ ID A +MK +PD+ +Y TL+ A
Sbjct: 365 QKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMKE-ARLEPDLVSYRTLLYAFSI 423
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ---------MERVLSGMLE 278
E L +MDER + + TQ+ + Y +AGM + +E +S
Sbjct: 424 RHLVGEAEILVSEMDERGLEIDEFTQSALTRMYIEAGMLKKSWLWFRRFHLEGNMSSECY 483
Query: 279 SAT-------------------CKPD----VWTMNTILSVFANKGQVDMMERWYEKFRNF 315
SA CK V N ++ + + + + + N
Sbjct: 484 SANIDAYGERGHILEAEKAFLCCKESRKLSVLEFNVMIKAYGISNRYEKACQLIDSMENH 543
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G+ P+ ++N LI + K + M++ Q Y VI +F +G +
Sbjct: 544 GVLPDKFSYNSLIQILASADLPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLEMA 603
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
E F++M ++ D + LIN +A+ G + ++ V + N YN++I
Sbjct: 604 EGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAVIYNSLIKL 663
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
K L E + YK ++ PD + + M + Y++ M
Sbjct: 664 YTKVGYLEEAQEAYKMLQASEVGPDVYSSNCMIDLYSERSM 704
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 129/300 (43%), Gaps = 3/300 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P + +Y L+ +L + P A+ +M E + Y A+++++ + ++ A
Sbjct: 547 PDKFSYNSLIQILASADLPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLEMAEGL 606
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+M N QPDV Y LI A D + + N V N ++ Y
Sbjct: 607 FKEMIGY-NVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAVIYNSLIKLYT 665
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G ++ + ML+++ PDV++ N ++ +++ + V E +E + G D
Sbjct: 666 KVGYLEEAQEAYK-MLQASEVGPDVYSSNCMIDLYSERSMVKQAEEIFESLKRKG-DANE 723
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+F +++ Y + + +++ MR+L +YNNV+ ++ G K TF++
Sbjct: 724 FSFAMMLCMYKRIGKLKEAFQIVQKMRELGLVTDLLSYNNVLGFYAMDGRFKDAVGTFKE 783
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M ++ D TF L G+ + + + + K + + +++ + ++ DD
Sbjct: 784 MIEAAIQPDDCTFKSLGVVLVKCGIPKQAVGKLEMTRKKDPQSGLQAWASILFSVVEVDD 843
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 92/236 (38%), Gaps = 41/236 (17%)
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW 308
N + NI+L GKA + +E + M+ S P T T++ V++ G + W
Sbjct: 195 NVIHYNIMLRILGKARKWHHVESLWDEMM-SRGITPVNSTYGTLIDVYSKGGLTEEALHW 253
Query: 309 YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV-----MEYMRKLQFPWTSSTYNNVI 363
++ G++P+ T +++ Y K + K +E + +S TYN +I
Sbjct: 254 LDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLESASQPHVCLSSYTYNTLI 313
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
+ + G + TF M EG+ +T T
Sbjct: 314 DTYGKAGQLREASDTFAWMLREGIIPNTVT------------------------------ 343
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+N +I C L E + ++M+E C PD+ T++I+ +AK D+
Sbjct: 344 -----FNTMIHICGNHGQLEEAASLMQKMEELRCPPDTRTYNILISLHAKHNNIDR 394
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 119/295 (40%), Gaps = 3/295 (1%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+ ++ AY ++ ++A ++ M+ PD ++Y++LI+ A + M
Sbjct: 517 FNVMIKAYGISNRYEKACQLIDSMEN-HGVLPDKFSYNSLIQILASADLPHKAKFYLMKM 575
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
E + + + V+ + K G + E + M+ +PDV +++ FA+ G
Sbjct: 576 QETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMI-GYNVQPDVVVYGILINAFADVGN 634
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
V + RN G+ +N LI Y K ++ + ++ + + N
Sbjct: 635 VREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGYLEEAQEAYKMLQASEVGPDVYSSNC 694
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+I+ +S+ K E FE + +G A+ +F ++ Y G + V+ +L
Sbjct: 695 MIDLYSERSMVKQAEEIFESLKRKG-DANEFSFAMMLCMYKRIGKLKEAFQIVQKMRELG 753
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ ++ YN V+ + +K M E +PD TF + K G+
Sbjct: 754 LVTDLLSYNNVLGFYAMDGRFKDAVGTFKEMIEAAIQPDDCTFKSLGVVLVKCGI 808
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 157/350 (44%), Gaps = 8/350 (2%)
Query: 140 YQPKEGTYMKL---LVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLID 196
+QP T+ L L ++GK G+ A VF++MV EG +P Y L+ C++ +
Sbjct: 122 HQPDTATFTTLVRGLCVVGKIGE---ALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLT 178
Query: 197 EAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIV 256
EA ++M PD++TY++LI A + ++ + TL +M + + PN V+ NIV
Sbjct: 179 EALNLFSEMIA-KGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIV 237
Query: 257 LGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG 316
+ K G + V+ M++ +PDV T ++ + ++D + ++ G
Sbjct: 238 VDALCKEGKVTEAHDVVDMMIQGGV-EPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNG 296
Query: 317 IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME 376
++N LI Y K + DK + E M + + + TY+ +I +G +
Sbjct: 297 CVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAI 356
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
F +M A G + T+ L++ + ++ ++ + +V YN I
Sbjct: 357 ALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGM 416
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+A DL ++ + + +PD T +IM K G+ D+ L +E
Sbjct: 417 CRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFRE 466
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 114/291 (39%), Gaps = 35/291 (12%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L K G+ A V + M++ G+EP Y AL+ +C S +DEA V + M C
Sbjct: 241 LCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEA-VKVFDMMVRNGCVC 299
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------MF 266
+V +Y+TLI R + L+++M + + PNT+T + ++ G G +F
Sbjct: 300 NVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALF 359
Query: 267 DQM----------------------ERVLSGM-----LESATCKPDVWTMNTILSVFANK 299
++M R+ M +E + PDV N +
Sbjct: 360 NEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRA 419
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G ++ + G+ P+ T NI+I K+ + D+ S + M + TY
Sbjct: 420 GDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTY 479
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
N + + E+M A G AD T L+ ++ GL V
Sbjct: 480 NTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQSV 530
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 147/391 (37%), Gaps = 40/391 (10%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL VF+ + + F QP TY L+ L K Q A +F+EM+ +GI P Y +L
Sbjct: 144 EALDVFDKMVGEGF-QPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSL 202
Query: 186 LAAYCRNSLIDEAFVTLNQM---KTLPNC------------------------------- 211
+ A C LN+M K +PN
Sbjct: 203 IHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGV 262
Query: 212 QPDVYTYSTLIKACVDAMRFELIETL--YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+PDV TY+ L+ +R E+ E + + M N V+ N ++ GY K D+
Sbjct: 263 EPDVVTYAALMDG--HCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKA 320
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+ M P+ T +T++ + G++ + + G P T++IL+
Sbjct: 321 MYLFEEMCRQEL-IPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLD 379
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
K + ++++ + YN I+ GD + F + G++
Sbjct: 380 YLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQP 439
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
D T +I G GL + R + N YN + ++ + ++
Sbjct: 440 DVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLL 499
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+ M + D T +++ + + +G++ V
Sbjct: 500 EEMLARGFSADVSTTALLVKMLSDDGLDQSV 530
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 78/200 (39%)
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
LS ++S PDV+T+ +++ F + +VD K G P+T TF L+
Sbjct: 78 LSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLC 137
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
+ V + M F TY ++ F +M A+G+ D
Sbjct: 138 VVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIF 197
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
T+ LI+ N + V + + K +I NV N V+ A K + E V M
Sbjct: 198 TYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMM 257
Query: 453 KEKHCRPDSETFSIMTEAYA 472
+ PD T++ + + +
Sbjct: 258 IQGGVEPDVVTYAALMDGHC 277
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 85/195 (43%), Gaps = 6/195 (3%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P ++ +L+ A + +K +FGI P+ T I+I ++ D SV
Sbjct: 54 PPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSV 113
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ + KL ++T+ ++ +G F++M EG + + T+ L+NG
Sbjct: 114 LAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCK 173
Query: 404 AGLFHKVISSVRLASKL---QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
++ ++ L S++ I+ ++ YN++I A + + + M + P+
Sbjct: 174 D---RQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPN 230
Query: 461 SETFSIMTEAYAKEG 475
+ +I+ +A KEG
Sbjct: 231 VVSLNIVVDALCKEG 245
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 152/359 (42%), Gaps = 36/359 (10%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL L K+G+ A V+ +M+ GI P + + ++ A+C++ +DEA + +M+ L
Sbjct: 197 LLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENL- 255
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+P++ TY +LI V E + + + M E+ V+ N VT +++ GY K D+
Sbjct: 256 GVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEA 315
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
E+VL GM E A PD ++ + G++D R ++ G+ N LI
Sbjct: 316 EKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLIN 375
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
Y K+ + V+ M S +YN +++ + G ++M EG++
Sbjct: 376 GYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEP 435
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIA-ENVSF-------------------- 428
T+ L+ G G F + L K +A + V +
Sbjct: 436 TVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLW 495
Query: 429 --------------YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+N +IS K ++E E ++ +MK+ C PD T+ + + Y K
Sbjct: 496 KDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 554
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 175/447 (39%), Gaps = 46/447 (10%)
Query: 81 IPGYRSKRTPIKNLKKKLERKAKAKAW-----VNTVAETFSDHVLKKQWFQALQV----- 130
IP RS + + NL K E + V V + F ++ + + +V
Sbjct: 188 IPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAG 247
Query: 131 FEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYC 190
F E +P TY L+ G E A+ V M E+G+ YT L+ YC
Sbjct: 248 FVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYC 307
Query: 191 RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT 250
+ +DEA L M+ PD Y LI + + L +M + N
Sbjct: 308 KQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNL 367
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYE 310
N ++ GY K G + E V++ M++ KPD ++ NT+L + +G +
Sbjct: 368 FICNSLINGYCKRGEIHEAEGVITRMVD-WNLKPDSYSYNTLLDGYCREGHTSEAFNLCD 426
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKM-------------------SSVMEYMRKLQ 351
K GI+P T+N L+ + +D S++++ + K++
Sbjct: 427 KMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKME 486
Query: 352 ----------------FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
F + T+N +I MG E F++M G D T+
Sbjct: 487 NFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYR 546
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
LI+GY A + + I+ ++ YN++IS K+ L+E+ + M +
Sbjct: 547 TLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIR 606
Query: 456 HCRPDSETFSIMTEAYAKEGMNDKVYA 482
P+ T+ + + + KEGM DK ++
Sbjct: 607 GLTPNIVTYGALIDGWCKEGMLDKAFS 633
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 148/381 (38%), Gaps = 34/381 (8%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P +Y LL + G A + ++M++EGIEPT Y LL CR D+A
Sbjct: 399 KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ 458
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ M PD YSTL+ FE TL++D+ R T + +T N ++ G
Sbjct: 459 IWHLMMK-RGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 517
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + E + M + C PD T T++ + V + I P
Sbjct: 518 CKMGKMVEAEEIFDKM-KDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPS 576
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+N LI K R +++ ++ M TY +I+ + G ++
Sbjct: 577 IEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYF 636
Query: 381 QMHAEGMKADTKTFCCLINGYANAG-------LFHKVI-------------SSVRLASKL 420
+M G+ A+ +++G G L K++ S +R A+
Sbjct: 637 EMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQ 696
Query: 421 QIAENVS------------FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+IA+++ YN I+ K + + R + + K PD+ T+ +
Sbjct: 697 KIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLI 756
Query: 469 EAYAKEGMNDKVYALEQEKLQ 489
Y+ G D+ + L E L+
Sbjct: 757 HGYSAAGNVDEAFRLRDEMLR 777
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 179/414 (43%), Gaps = 45/414 (10%)
Query: 98 LERKAKAKAWVNTV-AETFSDHVLKKQWFQ---ALQVFEMLKEQPFYQPKEGTYMKLLVL 153
L R+ A + +N V ++ D VL+ +L F+ + +Q ++P +Y KL+ +
Sbjct: 52 LLRRCNAISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHI 111
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI-DEAFVTLNQMKTLPNCQ 212
L + + R N++V+ L R ++I DE + P
Sbjct: 112 LSRGRMYDETRAYLNQLVD------------LCKFKDRGNVIWDELVGVYREFAFSPT-- 157
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------M 265
+ ++K V+ + ++ +M + P+ + N +L K G +
Sbjct: 158 ----VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYV 213
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+ QM RV G++ PDV+ ++ +++ F G+VD + +K N G++P T++
Sbjct: 214 YQQMIRV--GIV------PDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYH 265
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
LI Y + V+++M + TY +I+ + E M E
Sbjct: 266 SLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEE 325
Query: 386 -GMKADTKTFCCLINGYANAGLFHKVISSVRLAS---KLQIAENVSFYNAVISACIKADD 441
+ D + + LI+GY G K+ +VRL +L + N+ N++I+ K +
Sbjct: 326 AALVPDERAYGVLIDGYCRTG---KIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGE 382
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
+ E E V RM + + +PDS +++ + + Y +EG + + L + LQ +E +
Sbjct: 383 IHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPT 436
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 150/371 (40%), Gaps = 40/371 (10%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QA +V ++ +P P Y L+ L KS + + EM G+ P Y AL
Sbjct: 560 QAFKVKGAMEREPI-SPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGAL 618
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC----------------VD-- 227
+ +C+ ++D+AF + +M T ++ ST++ VD
Sbjct: 619 IDGWCKEGMLDKAFSSYFEM-TENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHG 677
Query: 228 -----------AMRFELIETLYQDMDERSVT---PNTVTQNIVLGGYGKAGMFDQMERVL 273
+R+ I+ + +DE T PN + NI + G K G D R
Sbjct: 678 FFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFF 737
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
S ML PD +T T++ ++ G VD R ++ G+ P T+N LI K
Sbjct: 738 S-MLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCK 796
Query: 334 KRMYDKMSSVMEYM-RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
D+ + + +K FP TYN +I+ + +G+ ++M EG+
Sbjct: 797 SENVDRAQRLFHKLHQKGLFP-NVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVV 855
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
T+ LING G + + + K + + Y ++ I++ ++ ++ ++Y M
Sbjct: 856 TYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMM 915
Query: 453 KEKHCRPDSET 463
H R S T
Sbjct: 916 ---HIRCLSTT 923
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/407 (19%), Positives = 153/407 (37%), Gaps = 73/407 (17%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
T+ ++ L K G+ A ++F++M + G P Y L+ YC+ S + +AF M
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVT------------- 252
+ P P + Y++LI + R + L +M R +TPN VT
Sbjct: 569 EREP-ISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGM 627
Query: 253 -----------------QNIVL-----GGYGKAGMFDQMERVLSGMLESA---------- 280
NI++ G + G D+ ++ M++
Sbjct: 628 LDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLK 687
Query: 281 -----------------TCK----PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+CK P+ N ++ G+VD R++ G P
Sbjct: 688 SDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVP 747
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ T+ LI Y D+ + + M + TYN +I + + F
Sbjct: 748 DNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLF 807
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL---QIAENVSFYNAVISAC 436
++H +G+ + T+ LI+GY G + ++ +L K+ I+ +V Y+A+I+
Sbjct: 808 HKLHQKGLFPNVVTYNTLIDGYCKIG---NMDAAFKLKDKMIEEGISPSVVTYSALINGL 864
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
K D+ ++ +M + + + + Y + G K++ L
Sbjct: 865 CKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKL 911
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 2/128 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A ++F L ++ + P TY L+ K G + A K+ ++M+EEGI P+ Y+AL
Sbjct: 802 RAQRLFHKLHQKGLF-PNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSAL 860
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C++ I+ + LNQM + Y TL++ + + + I LY M R
Sbjct: 861 INGLCKHGDIERSMKLLNQMIK-AGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRC 919
Query: 246 VTPNTVTQ 253
++ ++
Sbjct: 920 LSTTAISH 927
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 154/351 (43%), Gaps = 5/351 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL+ + ++E + P TY L+ L +SG+ A +F EM E G EP YT L
Sbjct: 273 EALEFWARMREDGCF-PTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVL 331
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDER 244
+ C+ +DEA LN+M P V ++ LI + C M + + L M+ +
Sbjct: 332 IDYLCKEGRMDEALKMLNEMVE-KGVAPSVVPFNALIGSYCKRGMMEDAVGVL-GLMESK 389
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
V PN T N ++ G+ + D+ +L+ M+ES PDV T NT++ G VD
Sbjct: 390 KVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKL-SPDVVTYNTLIHGLCEVGVVDS 448
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
R + G P+ TFN + + + ++E +++ Y +I+
Sbjct: 449 ASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALID 508
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
+ G +H F++M AE ++ TF +I+G G + V +K +
Sbjct: 509 GYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKP 568
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ YN ++ +K D + R+ +P+ T++ +AY +G
Sbjct: 569 TLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQG 619
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 140/330 (42%), Gaps = 37/330 (11%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
+Y L+ L ++G+ A + + M E+G PT YT L+ A C + EA +M
Sbjct: 257 SYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEM 316
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ C+P+VYTY+ LI R + + +M E+ V P+ V N ++G Y K GM
Sbjct: 317 RE-RGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGM 375
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+ VL G++ES P+V T N ++ F +D K + P+ T+N
Sbjct: 376 MEDAVGVL-GLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYN 434
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
LI + + D S + M + F T+N + MG E + +
Sbjct: 435 TLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEK 494
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
+KA+ + LI+GY AG K++ A +
Sbjct: 495 HVKANEHAYTALIDGYCKAG-------------KIEHAAS-------------------- 521
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++KRM + C P+S TF++M + KEG
Sbjct: 522 --LFKRMLAEECLPNSITFNVMIDGLRKEG 549
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 135/323 (41%), Gaps = 12/323 (3%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPEL--YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
K G +AR F ++ EP P+L YT+L+ YCRN ++ A M +
Sbjct: 201 KLGNMAVARLFFVRILR--CEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMP-----RR 253
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV- 272
+ +Y+ LI +A + + M E P T +++ ++G ++E +
Sbjct: 254 NAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESG--RELEALS 311
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
L G + C+P+V+T ++ +G++D + + G+ P FN LIG+Y
Sbjct: 312 LFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYC 371
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K+ M + V+ M + TYN +I F +M + D
Sbjct: 372 KRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVV 431
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
T+ LI+G G+ RL + + + +NA + + + E ++ + +
Sbjct: 432 TYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESL 491
Query: 453 KEKHCRPDSETFSIMTEAYAKEG 475
KEKH + + ++ + + Y K G
Sbjct: 492 KEKHVKANEHAYTALIDGYCKAG 514
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 140/360 (38%), Gaps = 71/360 (19%)
Query: 125 FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+AL +F ++E+ +P TY L+ L K G+ + A K+ NEMVE+G+ P+ + A
Sbjct: 307 LEALSLFGEMRERG-CEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNA 365
Query: 185 LLAAYCRNSLIDEAFVTLNQM---KTLPNCQ----------------------------- 212
L+ +YC+ ++++A L M K PN +
Sbjct: 366 LIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESK 425
Query: 213 --PDVYTYSTLIKA----------------------------------CVDAM-RFELIE 235
PDV TY+TLI C+ M R
Sbjct: 426 LSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAH 485
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
+ + + E+ V N ++ GY KAG + + ML + C P+ T N ++
Sbjct: 486 QILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRML-AEECLPNSITFNVMIDG 544
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
+G+V E F + P T+NIL+ K+ +D+ + ++ + +
Sbjct: 545 LRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPN 604
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
TY I+A+ G + E ++ EG+ D+ + LIN Y GL +R
Sbjct: 605 VVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLR 664
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 141/342 (41%), Gaps = 32/342 (9%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
A ++F ++ F P + T+ +V L + G+ A ++ + E+ ++ YTAL
Sbjct: 448 SASRLFRLMIRDGF-SPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTAL 506
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ YC+ I+ A +M C P+ T++ +I + + L +DM +
Sbjct: 507 IDGYCKAGKIEHAASLFKRMLA-EECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFD 565
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
V P T NI++ K FD+ +L+ ++ S +P+V T + + ++G+++
Sbjct: 566 VKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGY-QPNVVTYTAFIKAYCSQGRLEEA 624
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY-----N 360
E K +N G+ ++ +N+LI AYG + D V+ M + TY +
Sbjct: 625 EEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKH 684
Query: 361 NVIEAFSDMG------------------------DAKHMEYTFEQMHAEGMKADTKTFCC 396
VIE G D FE+M G + T+
Sbjct: 685 LVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSK 744
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
LING G + S + I+ + +N+++S+C K
Sbjct: 745 LINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCK 786
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 106/267 (39%), Gaps = 10/267 (3%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
YQP TY + G+ E A ++ ++ EG+ +Y L+ AY L+D AF
Sbjct: 601 YQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAF 660
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L +M C+P TYS L+K L+ ++ V + NI +
Sbjct: 661 GVLRRMFG-TGCEPSYLTYSILMK--------HLVIEKHKKEGSNPVGLDVSLTNISVDN 711
Query: 260 YGKAGMFD-QMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
D + VL + C P++ T + +++ G++++ Y R GI
Sbjct: 712 TDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGIS 771
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P N L+ + K M+ + ++++ M + +Y +I + + + E
Sbjct: 772 PSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAV 831
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAG 405
F + G D + LI+G A G
Sbjct: 832 FCSLLRCGYNYDEVAWKVLIDGLAKTG 858
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/391 (19%), Positives = 145/391 (37%), Gaps = 47/391 (12%)
Query: 125 FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
AL F ++ + T+ LL+LL + A V N M++ P T
Sbjct: 67 LTALNFFRWIRRHHNFPHSLATHHSLLLLLVRHRTLRAAENVRNSMIKSCTSPHDA--TF 124
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE---TLYQDM 241
LL R + A +Q+ + + +Y+ L+ C+ RF +++ +LY++M
Sbjct: 125 LLNLLRRMNTAAAAADHQHQLAF----KLSLTSYNRLL-MCLS--RFSMVDEMISLYKEM 177
Query: 242 ---DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
+ SV PN +T N +L Y K G + R+ + PD++T +++ +
Sbjct: 178 LTDNGNSVFPNLITLNTMLNSYCKLGNM-AVARLFFVRILRCEPGPDLFTYTSLVLGYCR 236
Query: 299 KGQVD-------MMER------------------------WYEKFRNFGIDPETRTFNIL 327
V+ +M R ++ + R G P RT+ +L
Sbjct: 237 NDDVERACGVFCVMPRRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVL 296
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
+ A + + S+ MR+ TY +I+ G +M +G+
Sbjct: 297 VCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGV 356
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
F LI Y G+ + + L ++ NV YN +I + +
Sbjct: 357 APSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMA 416
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ +M E PD T++ + + G+ D
Sbjct: 417 LLNKMVESKLSPDVVTYNTLIHGLCEVGVVD 447
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 101/234 (43%), Gaps = 8/234 (3%)
Query: 58 ESAVAAKKRLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSD 117
+SA +R++ G P SI K I+ KK+ + ++ +D
Sbjct: 657 DSAFGVLRRMFGTGCEPSYLTYSI---LMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTD 713
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
K + +FE + E P TY KL+ L K G+ +A +++ M E GI P
Sbjct: 714 IWSKIDFGITTVLFEKMAECGCV-PNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISP 772
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
+ ++ +LL++ C+ + EA L+ M + + +Y LI + M E E +
Sbjct: 773 SEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSH-LAHLESYKLLICGLFEQMNKEKAEAV 831
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK--PDVWTM 289
+ + + V +++ G K G DQ +L+ ++E C+ P+ ++M
Sbjct: 832 FCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLN-LMEKNGCRLHPETYSM 884
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 64/157 (40%), Gaps = 1/157 (0%)
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
C P++ TYS LI R + +LY M E ++P+ + N +L K GMF +
Sbjct: 735 CVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAV 794
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
+L M+E + I +F + + E + G + + + +LI
Sbjct: 795 TLLDSMMECSHLAHLESYKLLICGLFEQMNK-EKAEAVFCSLLRCGYNYDEVAWKVLIDG 853
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS 367
K D+ S ++ M K TY+ +++ +
Sbjct: 854 LAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQELN 890
Score = 42.0 bits (97), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 39/238 (16%), Positives = 89/238 (37%), Gaps = 41/238 (17%)
Query: 254 NIVLGGYGKAGMFDQMERVLSGML--ESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
N +L + M D+M + ML + P++ T+NT+L+ + G + + ++ +
Sbjct: 155 NRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFVR 214
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
P+ T+ L+ Y + ++ V M + + +Y N+I + G
Sbjct: 215 ILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPR----RNAVSYTNLIHGLCEAGK 270
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNA 431
+ +M +G +T Y
Sbjct: 271 LHEALEFWARMREDGCFPTVRT-----------------------------------YTV 295
Query: 432 VISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
++ A ++ +E ++ M+E+ C P+ T++++ + KEG D+ + E ++
Sbjct: 296 LVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVE 353
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 163/346 (47%), Gaps = 2/346 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY ++ L K G +LA + +M + IE +YT ++ A C +++A
Sbjct: 201 QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALN 260
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M +P+V TY++LI+ + R+ L DM ER + PN VT + ++ +
Sbjct: 261 LFTEMDN-KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 319
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + E++ M++ + PD++T +++++ F ++D + +E + P
Sbjct: 320 VKEGKLVEAEKLYDEMIKRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 378
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+N LI + K + ++ + M + + TYN +I+ GD + F+
Sbjct: 379 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 438
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M ++G+ D T+ L++G G K + K ++ ++ YN +I KA
Sbjct: 439 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 498
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ + ++ + K +P+ ++ M + ++G+ ++ AL +E
Sbjct: 499 KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 544
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 187/418 (44%), Gaps = 14/418 (3%)
Query: 57 SESAVAAKKRLWKEGEYPGV-SETSIPGYRSKRTPIK---NLKKKLERKAKAKAWV---N 109
+ AVA R+ G P + + ++ KR I +L KK+E K K +A V
Sbjct: 185 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME-KGKIEADVVIYT 243
Query: 110 TVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNE 169
T+ + ++ K AL +F + + +P TY L+ L G+ A ++ ++
Sbjct: 244 TIIDALCNY---KNVNDALNLFTEMDNKGI-RPNVVTYNSLIRCLCNYGRWSDASRLLSD 299
Query: 170 MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM 229
M+E I P ++AL+ A+ + + EA ++M + PD++TYS+LI
Sbjct: 300 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK-RSIDPDIFTYSSLINGFCMHD 358
Query: 230 RFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM 289
R + + +++ M + PN VT N ++ G+ KA ++ + M + V T
Sbjct: 359 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV-TY 417
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
NT++ G DM ++ ++K + G+ P+ T++IL+ K +K V EY++K
Sbjct: 418 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 477
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
+ TYN +IE G + F + +G+K + + +I+G+ GL +
Sbjct: 478 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 537
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ R + N YN +I A ++ D + K M+ D+ T S++
Sbjct: 538 ADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 595
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 159/407 (39%), Gaps = 86/407 (21%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
+Y L+ + Q LA V +M++ G EP ++LL YC I EA ++QM
Sbjct: 101 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 160
Query: 206 KTL---PN-------------------------------CQPDVYTYSTLIKACVDAMRF 231
+ PN CQPD++TY T++
Sbjct: 161 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 220
Query: 232 EL------------IET-----------------------LYQDMDERSVTPNTVTQNIV 256
+L IE L+ +MD + + PN VT N +
Sbjct: 221 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 280
Query: 257 LGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG 316
+ G + R+LS M+E P+V T + ++ F +G++ E+ Y++
Sbjct: 281 IRCLCNYGRWSDASRLLSDMIERKI-NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 339
Query: 317 IDPETRTFNILIGAYGKKRMYDKMSSVMEYM-RKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
IDP+ T++ LI + D+ + E M K FP TYN +I+ F +
Sbjct: 340 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP-NVVTYNTLIKGFCKAKRVEEG 398
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISSVRLASKLQIAENVSF 428
F +M G+ +T T+ LI G AG +F K++S + ++
Sbjct: 399 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD-------GVPPDIIT 451
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
Y+ ++ K L + V++ +++ PD T++IM E K G
Sbjct: 452 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 498
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 133/311 (42%), Gaps = 36/311 (11%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W A ++ + E+ P T+ L+ K G+ A K+++EM++ I+P Y
Sbjct: 289 RWSDASRLLSDMIERKI-NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 347
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
++L+ +C + +DEA M + +C P+V TY+TLIK A R E L+++M
Sbjct: 348 SSLINGFCMHDRLDEAKHMFELMIS-KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 406
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT--------------CK----- 283
+R + NTVT N ++ G +AG D +++ M+ CK
Sbjct: 407 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 466
Query: 284 ---------------PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
PD++T N ++ G+V+ + G+ P + +I
Sbjct: 467 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 526
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
+ +K + ++ ++ M++ S TYN +I A GD ++M + G
Sbjct: 527 SGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 586
Query: 389 ADTKTFCCLIN 399
D T +IN
Sbjct: 587 GDASTISMVIN 597
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 152/361 (42%), Gaps = 18/361 (4%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
A+ +F EM++ +P P + KLL + K + +L + M I Y
Sbjct: 47 DAVDLFGEMVQSRPL--PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 104
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ +CR S + A L +M L +PD+ T S+L+ R L M
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMKL-GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
PNTVT N ++ G + ++ M+ C+PD++T T+++ +G +D+
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG-CQPDLFTYGTVVNGLCKRGDIDL 222
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+K I+ + + +I A K + D ++ E K P TYN++I
Sbjct: 223 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP-NVVTYNSLI 281
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL--- 420
+ G M + + TF LI+ + G K++ + +L ++
Sbjct: 282 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG---KLVEAEKLYDEMIKR 338
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK-----EG 475
I ++ Y+++I+ D L E + +++ M K C P+ T++ + + + K EG
Sbjct: 339 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 398
Query: 476 M 476
M
Sbjct: 399 M 399
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 125/295 (42%), Gaps = 18/295 (6%)
Query: 191 RNSLID-------EAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
RN L+D + F + Q + LP+ + ++ L+ A +F+L+ +L + M
Sbjct: 37 RNVLLDLKLDDAVDLFGEMVQSRPLPS----IVEFNKLLSAIAKMNKFDLVISLGERMQN 92
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
++ + + NI++ + + VL M++ +PD+ T++++L+ + + ++
Sbjct: 93 LRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGY-EPDIVTLSSLLNGYCHGKRIS 151
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
++ P T TFN LI + ++++ M TY V+
Sbjct: 152 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 211
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ-- 421
GD ++M ++AD + +I+ N + V ++ L +++
Sbjct: 212 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCN---YKNVNDALNLFTEMDNK 268
Query: 422 -IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
I NV YN++I + R+ M E+ P+ TFS + +A+ KEG
Sbjct: 269 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 323
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 65/165 (39%)
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P FN L+ A K +D + S+ E M+ L+ + +YN +I F
Sbjct: 62 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 121
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
+M G + D T L+NGY + + ++ V ++ N +N +I
Sbjct: 122 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 181
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ E + RM + C+PD T+ + K G D +L
Sbjct: 182 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 226
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 155/366 (42%), Gaps = 37/366 (10%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+ A +V E + E+ P TY LL L +S + +LAR+VF EM G +P P Y
Sbjct: 103 RVMDAYKVLEKMVEESIV-PNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITY 161
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
L+ R IDEA + + ++L DV T +T++ A R + ++M
Sbjct: 162 GTLIQHLSRAGEIDEALRVMIEQRSL-ELPTDVITCTTIVGGLCKASRLDDALKFMEEMR 220
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVL-------SGMLESAT--------CK---- 283
+ V PN VT + ++ G+ + G D++ R G LE+A CK
Sbjct: 221 QMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYL 280
Query: 284 ----------------PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
PDV T + +++ FA GQ D E R G+ P+ T++ L
Sbjct: 281 DRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTL 340
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
I K+R + ++E M P TYN+V++ G + +E M
Sbjct: 341 INVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRC 400
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
D T+ ++NG + AG+ + L + + + Y+ VI++ +A L E
Sbjct: 401 SPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACG 460
Query: 448 VYKRMK 453
+Y M+
Sbjct: 461 MYHGME 466
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 158/360 (43%), Gaps = 10/360 (2%)
Query: 129 QVFEMLKE-QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
Q E+++E Y P Y ++ L ++ + A KV +MVEE I P YT LL
Sbjct: 72 QALELVRELSGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLN 131
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVT 247
CR++ A +MK C+P+ TY TLI+ A E+ E L +++RS+
Sbjct: 132 GLCRSNKTKLAREVFQEMKR-NGCKPNPITYGTLIQHLSRA--GEIDEALRVMIEQRSLE 188
Query: 248 --PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ +T ++GG KA D + + M + +P+ T + ++ F G++D +
Sbjct: 189 LPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGV-RPNEVTYSNLVHGFRQHGELDRV 247
Query: 306 ERWYE--KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
R++E K R G E + + A K D+ +E +R+ TY+ +I
Sbjct: 248 IRFFEEEKARKGG-SLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLI 306
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
F+ G E M G+K D T+ LIN F + L
Sbjct: 307 NTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSP 366
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
NV YN+V+ K+ + E+ RVY+ M + C PD T+SI+ +K GM D L
Sbjct: 367 PNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKL 426
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 147/322 (45%), Gaps = 4/322 (1%)
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
EM G+ P +YT ++ +CR L+ +A ++M C PDV TY+TL+
Sbjct: 6 EMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGC-GCLPDVVTYNTLLNGLCKE 64
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
R E L +M ER V P+ T ++ GY G D+ ++ ML +PD+ T
Sbjct: 65 RRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL-RPDIVT 123
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK-RMYDKMSSVMEYM 347
NT++ +G +D ++ + I P T++ILI ++ +K ++ D + E +
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
K P TYN++I+ + G+ + ++M + D T+ LI+GY
Sbjct: 184 NKGILP-NIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKM 242
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
H + + K ++ +V YN +I+ ++ E ++++M K PD T+ M
Sbjct: 243 HDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSM 302
Query: 468 TEAYAKEGMNDKVYALEQEKLQ 489
+ G + + + L E LQ
Sbjct: 303 INGHVTAGNSKEAFQLHDEMLQ 324
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 127/265 (47%), Gaps = 4/265 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY LL L K + A + NEM E G+ P +T L+ YC +D+A
Sbjct: 49 PDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQL 108
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ M +PD+ TY+TLI + L+ DM R + PN VT +I++ +
Sbjct: 109 FDTMLN-QRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC 167
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G + L M+ P++ T N+I+ + G V +++ +K + P+
Sbjct: 168 EKGQVEDAFGFLDEMINKGIL-PNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDL 226
Query: 322 RTFNILIGAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+N LI Y K+ +M+D ++ M K + TYN +I FS G+ + + FE
Sbjct: 227 ITYNTLIHGYIKEDKMHDAFK-LLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFE 285
Query: 381 QMHAEGMKADTKTFCCLINGYANAG 405
+M A+G++ D T+ +ING+ AG
Sbjct: 286 KMCAKGIEPDRYTYMSMINGHVTAG 310
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 107/222 (48%), Gaps = 3/222 (1%)
Query: 110 TVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNE 169
T + ++ + +ALQ+F+ + Q +P TY L+ + + G + A ++++
Sbjct: 88 TFTTLIHGYCIEGKLDKALQLFDTMLNQRL-RPDIVTYNTLIDGMCRQGDLDKANDLWDD 146
Query: 170 MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM 229
M I P Y+ L+ ++C +++AF L++M P++ TY+++IK +
Sbjct: 147 MHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMIN-KGILPNIMTYNSIIKGYCRSG 205
Query: 230 RFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM 289
+ Q M V+P+ +T N ++ GY K ++L+ M+E +PDV T
Sbjct: 206 NVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLN-MMEKEKVQPDVVTY 264
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
N +++ F+ G V +EK GI+P+ T+ +I +
Sbjct: 265 NMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGH 306
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 43/105 (40%)
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
+M G+ D + +I G+ AGL + +V YN +++ K
Sbjct: 4 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
L++ E + M+E+ PD TF+ + Y EG DK L
Sbjct: 64 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQL 108
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 163/346 (47%), Gaps = 2/346 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY ++ L K G +LA + +M + IE +YT ++ A C +++A
Sbjct: 217 QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALN 276
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M +P+V TY++LI+ + R+ L DM ER + PN VT + ++ +
Sbjct: 277 LFTEMDN-KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 335
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + E++ M++ + PD++T +++++ F ++D + +E + P
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+N LI + K + ++ + M + + TYN +I+ GD + F+
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 454
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M ++G+ D T+ L++G G K + K ++ ++ YN +I KA
Sbjct: 455 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ + ++ + K +P+ ++ M + ++G+ ++ AL +E
Sbjct: 515 KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 187/418 (44%), Gaps = 14/418 (3%)
Query: 57 SESAVAAKKRLWKEGEYPGV-SETSIPGYRSKRTPIK---NLKKKLERKAKAKAWV---N 109
+ AVA R+ G P + + ++ KR I +L KK+E K K +A V
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME-KGKIEADVVIYT 259
Query: 110 TVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNE 169
T+ + ++ K AL +F + + +P TY L+ L G+ A ++ ++
Sbjct: 260 TIIDALCNY---KNVNDALNLFTEMDNKGI-RPNVVTYNSLIRCLCNYGRWSDASRLLSD 315
Query: 170 MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM 229
M+E I P ++AL+ A+ + + EA ++M + PD++TYS+LI
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK-RSIDPDIFTYSSLINGFCMHD 374
Query: 230 RFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM 289
R + + +++ M + PN VT N ++ G+ KA ++ + M + V T
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV-TY 433
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
NT++ G DM ++ ++K + G+ P+ T++IL+ K +K V EY++K
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
+ TYN +IE G + F + +G+K + + +I+G+ GL +
Sbjct: 494 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ R + N YN +I A ++ D + K M+ D+ T S++
Sbjct: 554 ADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 611
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 159/407 (39%), Gaps = 86/407 (21%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
+Y L+ + Q LA V +M++ G EP ++LL YC I EA ++QM
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 206 KTL---PN-------------------------------CQPDVYTYSTLIKACVDAMRF 231
+ PN CQPD++TY T++
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 232 EL------------IET-----------------------LYQDMDERSVTPNTVTQNIV 256
+L IE L+ +MD + + PN VT N +
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 257 LGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG 316
+ G + R+LS M+E P+V T + ++ F +G++ E+ Y++
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKI-NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 317 IDPETRTFNILIGAYGKKRMYDKMSSVMEYM-RKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
IDP+ T++ LI + D+ + E M K FP TYN +I+ F +
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP-NVVTYNTLIKGFCKAKRVEEG 414
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISSVRLASKLQIAENVSF 428
F +M G+ +T T+ LI G AG +F K++S + ++
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD-------GVPPDIIT 467
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
Y+ ++ K L + V++ +++ PD T++IM E K G
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 133/311 (42%), Gaps = 36/311 (11%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W A ++ + E+ P T+ L+ K G+ A K+++EM++ I+P Y
Sbjct: 305 RWSDASRLLSDMIERKI-NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
++L+ +C + +DEA M + +C P+V TY+TLIK A R E L+++M
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMIS-KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT--------------CK----- 283
+R + NTVT N ++ G +AG D +++ M+ CK
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482
Query: 284 ---------------PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
PD++T N ++ G+V+ + G+ P + +I
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
+ +K + ++ ++ M++ S TYN +I A GD ++M + G
Sbjct: 543 SGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 602
Query: 389 ADTKTFCCLIN 399
D T +IN
Sbjct: 603 GDASTISMVIN 613
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 152/361 (42%), Gaps = 18/361 (4%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
A+ +F EM++ +P P + KLL + K + +L + M I Y
Sbjct: 63 DAVDLFGEMVQSRPL--PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ +CR S + A L +M L +PD+ T S+L+ R L M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKL-GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
PNTVT N ++ G + ++ M+ C+PD++T T+++ +G +D+
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG-CQPDLFTYGTVVNGLCKRGDIDL 238
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+K I+ + + +I A K + D ++ E K P TYN++I
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP-NVVTYNSLI 297
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL--- 420
+ G M + + TF LI+ + G K++ + +L ++
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG---KLVEAEKLYDEMIKR 354
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK-----EG 475
I ++ Y+++I+ D L E + +++ M K C P+ T++ + + + K EG
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 476 M 476
M
Sbjct: 415 M 415
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 125/295 (42%), Gaps = 18/295 (6%)
Query: 191 RNSLID-------EAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
RN L+D + F + Q + LP+ + ++ L+ A +F+L+ +L + M
Sbjct: 53 RNVLLDLKLDDAVDLFGEMVQSRPLPS----IVEFNKLLSAIAKMNKFDLVISLGERMQN 108
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
++ + + NI++ + + VL M++ +PD+ T++++L+ + + ++
Sbjct: 109 LRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGY-EPDIVTLSSLLNGYCHGKRIS 167
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
++ P T TFN LI + ++++ M TY V+
Sbjct: 168 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 227
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ-- 421
GD ++M ++AD + +I+ N + V ++ L +++
Sbjct: 228 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCN---YKNVNDALNLFTEMDNK 284
Query: 422 -IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
I NV YN++I + R+ M E+ P+ TFS + +A+ KEG
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 339
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 65/165 (39%)
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P FN L+ A K +D + S+ E M+ L+ + +YN +I F
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
+M G + D T L+NGY + + ++ V ++ N +N +I
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ E + RM + C+PD T+ + K G D +L
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 158/350 (45%), Gaps = 6/350 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ +G E+ F EM G P Y ++ AYC+ I EAF
Sbjct: 201 PNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKL 260
Query: 202 LNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L M L P++ +Y+ +I C + E E L ++M +R P+ VT N ++ GY
Sbjct: 261 LRLM-ALKGLNPNLISYNVVINGLCREGQMKETSEIL-EEMSKRRYVPDRVTFNTLINGY 318
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
G F Q + + M+++ P+V T T+++ G ++ + ++ R+ G+ P
Sbjct: 319 CNVGNFHQALVLHAEMVKNGL-SPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPN 377
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
RT+ LI + ++ + +M+ M + F T TYN +I +G + +
Sbjct: 378 GRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQ 437
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVIS-SVRLASKLQIAENVSFYNAVISACIKA 439
+M G D ++ +I+G+ K V + +K I+ +V+ Y+++I K
Sbjct: 438 EMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAK-GISPDVATYSSLIQGLCKQ 496
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
L E+ +++ M PD T++ + AY EG DK L E +Q
Sbjct: 497 RRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQ 546
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 160/368 (43%), Gaps = 23/368 (6%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y P T+ L+ G A + EMV+ G+ P YT L+ + C+ ++ A
Sbjct: 304 YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAM 363
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L+QM+ P+ TY+TLI + + ++M E TP +T N ++ G
Sbjct: 364 EFLDQMRD-RGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALING 422
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ G + +L M+E PDV + +TI+S F +++ + + GI P
Sbjct: 423 HCILGRMEDASGLLQEMIERGFI-PDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISP 481
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ T++ LI K+R ++ + + M L P TY ++I A+ GD
Sbjct: 482 DVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLH 541
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVS---FYNAVISAC 436
++M +G D T+ LING+ + + RL KL E+V YN +I C
Sbjct: 542 DEMIQKGFSPDIVTYNVLINGFNKQS---RTKEAKRLLLKLLYEESVPNEITYNTLIDNC 598
Query: 437 IKAD--------------DLM-EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
+ LM E +RV + M +K + + E ++++ ++K G +K Y
Sbjct: 599 NNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAY 658
Query: 482 ALEQEKLQ 489
L +E L
Sbjct: 659 NLYKEMLH 666
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 118/280 (42%), Gaps = 2/280 (0%)
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM- 269
C+ + ++K+C ++ P ++ N +L + ++
Sbjct: 128 CKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIA 187
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
E + M+ES P+V+T N ++ F G ++M ++ + G P T+N +I
Sbjct: 188 EGIFKEMVESGV-SPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIID 246
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
AY K R + ++ M +YN VI G K E+M
Sbjct: 247 AYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVP 306
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
D TF LINGY N G FH+ + K ++ NV Y +I++ KA +L
Sbjct: 307 DRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFL 366
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+M+++ P+ T++ + + ++++G + Y + +E ++
Sbjct: 367 DQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVE 406
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 134/300 (44%), Gaps = 3/300 (1%)
Query: 191 RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMR-FELIETLYQDMDERSVTPN 249
R +LI++A +N K+ P V +Y+ ++ A + + ++ E ++++M E V+PN
Sbjct: 144 RVNLINKALSIVNLAKSY-GFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPN 202
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
T NI++ G+ AG +M G +E C P+V T NTI+ + ++ +
Sbjct: 203 VYTYNILIRGFCTAGNL-EMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLL 261
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
G++P ++N++I ++ + S ++E M K ++ T+N +I + ++
Sbjct: 262 RLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNV 321
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFY 429
G+ +M G+ + T+ LIN AG ++ + + + N Y
Sbjct: 322 GNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTY 381
Query: 430 NAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+I + L + ++ K M E P T++ + + G + L QE ++
Sbjct: 382 TTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIE 441
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 129/303 (42%), Gaps = 21/303 (6%)
Query: 110 TVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNE 169
T+ + FS KQ +Q ++ EM++ + P TY L+ G+ E A + E
Sbjct: 383 TLIDGFSQQGFLKQAYQIMK--EMVENG--FTPTIITYNALINGHCILGRMEDASGLLQE 438
Query: 170 MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM 229
M+E G P Y+ +++ +CRN +++AF +M PDV TYS+LI+
Sbjct: 439 MIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEM-VAKGISPDVATYSSLIQGLCKQR 497
Query: 230 RFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM 289
R + L+Q+M + P+ VT ++ Y G D+ R+ M++ PD+ T
Sbjct: 498 RLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGF-SPDIVTY 556
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG---------------AYGKK 334
N +++ F + + +R K P T+N LI + K
Sbjct: 557 NVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMK 616
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
+ ++ V+E M + + YN +I S +G+ + +++M G + T
Sbjct: 617 GLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTI 676
Query: 395 CCL 397
L
Sbjct: 677 MAL 679
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 131/325 (40%), Gaps = 26/325 (8%)
Query: 58 ESAVAAKKRLWKEGEYPGVSE--TSIPGYRSKRTPIKNLKKKLERKAKAKAW-VNTVAET 114
E A + + + G P V T I G+ + K + K+E AK + V T +
Sbjct: 430 EDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSL 489
Query: 115 FSDHVLKKQWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE 173
+++ + +F EML P E TY L+ G + A ++ +EM+++
Sbjct: 490 IQGLCKQRRLGEVCDLFQEMLSLG--LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQK 547
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL-PNCQPDVYTYSTLIKAC------- 225
G P Y L+ + + S EA L +K L P+ TY+TLI C
Sbjct: 548 GFSPDIVTYNVLINGFNKQSRTKEAKRLL--LKLLYEESVPNEITYNTLIDNCNNLEFKS 605
Query: 226 -VDAMRFELIETLYQDMD-------ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
+ M+ ++ L + D ++ N N+++ G+ K G ++ + ML
Sbjct: 606 ALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEML 665
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
S V M S++ +V++ + ++ I E +LIG K+
Sbjct: 666 HSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRI-TEAALAKVLIGINSKEGNM 724
Query: 338 DKMSSVMEYMR-KLQFPWTSSTYNN 361
D + +V++ M P++S+ N
Sbjct: 725 DAVFNVLKDMALSGLLPYSSANLRN 749
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 164/429 (38%), Gaps = 72/429 (16%)
Query: 129 QVFEMLKEQP--FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+V +L+E P P TY ++ GK GQ + A V EM +G+ P Y +
Sbjct: 233 RVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAI 292
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
A R+ EA L QM++ PDV +Y IKAC ++E L +M R V
Sbjct: 293 RACGRSGRWKEAVEVLRQMES-QGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGV 351
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLS-----GMLESAT--------C----------- 282
PNT+ N + GK G +++ +L G+ AT C
Sbjct: 352 APNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALE 411
Query: 283 ----------KPDVWTMNTILSVFANKGQVDMM--------------------------- 305
KPD + N+ + GQ +M
Sbjct: 412 LLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACG 471
Query: 306 --ERWYEKFRNF------GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
RW E G+ P T+N I GK ++K ++ M++L S
Sbjct: 472 ERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSI 531
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
TYN+ I A S G K +M +G+ D ++ I+ Y G + + + +R
Sbjct: 532 TYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQM 591
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
+ NV YN+VI AC + + + + K +KE PD ++++ A K G
Sbjct: 592 PTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRW 651
Query: 478 DKVYALEQE 486
++ L +E
Sbjct: 652 EEALDLLRE 660
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 141/315 (44%), Gaps = 6/315 (1%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A + +EM E G+ YT + R ++A L ++ P+V+ Y++ I
Sbjct: 129 ALGILDEMKEGGVV-CAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSAI 187
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE--SA 280
+AC ++E+ +L ++M +R V P+ ++ N + G+ G Q ERV+ + E S
Sbjct: 188 EACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGG---QWERVIGLLREMPSV 244
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
PD T N++++ +GQ + G+ PET ++N+ I A G+ + +
Sbjct: 245 GLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEA 304
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
V+ M +Y+ I+A G + ++M G+ +T F I
Sbjct: 305 VEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVA 364
Query: 401 YANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
G + K + +R + L + + + +N+ I+AC K+ E + K M K +PD
Sbjct: 365 CGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPD 424
Query: 461 SETFSIMTEAYAKEG 475
+ +++ EA K G
Sbjct: 425 AISYNSAIEACGKGG 439
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 155/361 (42%), Gaps = 3/361 (0%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
QW ++ + + + + P + +V GK GQ E A ++ E+ G+ P +
Sbjct: 335 QWETSVDLLDEMAGRGV-APNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSF 393
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
+ +AA ++ EA L +M +PD +Y++ I+AC ++E+ L + M
Sbjct: 394 NSAIAACTKSGRWKEALELLKEMPA-KRLKPDAISYNSAIEACGKGGQWEMALELRRQMP 452
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
+ +TPN ++ NI + G+ G + + +L M + P+V T N+ + GQ
Sbjct: 453 TKGLTPNVISSNIAIRACGERGRWQEGLELLRQM-PAQGLTPNVITYNSAIKTCGKGGQW 511
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ K + + P++ T+N I A K+ + + +++ M +Y
Sbjct: 512 EKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAA 571
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I+A+ G + QM +G+ + T+ +I G + K + ++ + +
Sbjct: 572 IDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAV 631
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
A ++ YN ISAC K E + + M + PD +++ A EG +K
Sbjct: 632 APDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALG 691
Query: 483 L 483
L
Sbjct: 692 L 692
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 152/363 (41%), Gaps = 2/363 (0%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+ QW +AL++ + EQ P Y + G Q E+A + EM + + P
Sbjct: 157 QGQWEKALELLREIPEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEI 216
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
Y + + A R + L +M ++ PD TY+++I C +++ ++ +
Sbjct: 217 SYNSAIKACGRGGQWERVIGLLREMPSV-GLTPDAITYNSVITGCGKEGQWKEALSVLTE 275
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M + +TP T++ N+ + G++G + + VL M ES PDV + + + G
Sbjct: 276 MSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQM-ESQGVTPDVISYDAAIKACGGGG 334
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
Q + ++ G+ P T FN I A GK ++K ++ + L ++++N
Sbjct: 335 QWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFN 394
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+ I A + G K ++M A+ +K D ++ I G + + R
Sbjct: 395 SAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTK 454
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+ NV N I AC + E + ++M + P+ T++ + K G +K
Sbjct: 455 GLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKA 514
Query: 481 YAL 483
L
Sbjct: 515 LDL 517
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 148/357 (41%), Gaps = 13/357 (3%)
Query: 123 QWFQALQVFEMLKEQPF--YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+W +AL E+LKE P +P +Y + GK GQ E+A ++ +M +G+ P
Sbjct: 405 RWKEAL---ELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVI 461
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
+ A E L QM P+V TY++ IK C ++E L
Sbjct: 462 SSNIAIRACGERGRWQEGLELLRQMPA-QGLTPNVITYNSAIKTCGKGGQWEKALDLLAK 520
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M E ++TP+++T N + K G + + +L M PDV + + + G
Sbjct: 521 MKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGL-TPDVISYTAAIDAYGKNG 579
Query: 301 QVDMMERWYEKFRNF---GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
Q ER E R G+ P T+N +I A G+ ++K +++ +++
Sbjct: 580 Q---WERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLM 636
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
+YN I A G + +M AEG+ D ++ I G + K + + L
Sbjct: 637 SYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLM 696
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
++ + Y+ I AC K E + + M ++ + + S++ EA +
Sbjct: 697 GAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGLSHRNISNSLIVEALGDD 753
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 163/360 (45%), Gaps = 35/360 (9%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL L ++G+ A V+ +M+ GI P YT ++ AYC+ +DEAF + +M+
Sbjct: 227 LLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMER-S 285
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
C+P+V TY++LI V + + M E+ + N+ T +++ GY K G +Q
Sbjct: 286 CCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQA 345
Query: 270 ERVLSGMLES--------------ATC--------------------KPDVWTMNTILSV 295
E+++ M+E A C K + N++++
Sbjct: 346 EKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLING 405
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
+ G V+ +++ + P++ +N L+ + K+ + K + + M +T
Sbjct: 406 YCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFT 465
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
TYN +++ +G +H + + MH G+ + T+C L++ + G F + + +
Sbjct: 466 VVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWK 525
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
A ++++ YN +I K + L++ + ++ +MKE PD T+ + + Y K G
Sbjct: 526 DALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVG 585
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/446 (21%), Positives = 175/446 (39%), Gaps = 47/446 (10%)
Query: 81 IPGYRSKRTPIKNLKKKLERKAKAKAWVNTVA-----ETFSDHVLKKQWFQALQV---FE 132
+P RS + + NL + E + +A + FS ++ + + +V F
Sbjct: 218 VPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFN 277
Query: 133 MLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYC 190
+KE + +P TY L+ G A+KV M E+GI YT L+ YC
Sbjct: 278 FVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYC 337
Query: 191 RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT 250
+ +++A + M N D + Y LI A A R + + M + + NT
Sbjct: 338 KRGQMEQAEKLIGCMME-KNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNT 396
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK----------- 299
V N ++ GY K G ++ VL M + KPD + NT+L F +
Sbjct: 397 VICNSLINGYCKLGHVNKAAEVLVSM-KDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCD 455
Query: 300 ------------------------GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
G V+ + G+ P T+ L+ A+ K
Sbjct: 456 EMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVG 515
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
+D+ + + F + + YN +I F M + F +M G D T+
Sbjct: 516 TFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYR 575
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
LI+GY G + + ++ + I+ + YN++I+ ++++L ++ + MK +
Sbjct: 576 TLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNR 635
Query: 456 HCRPDSETFSIMTEAYAKEGMNDKVY 481
P+ T+ + + +GM DK Y
Sbjct: 636 ELSPNVVTYGSLIAGWCDKGMMDKAY 661
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 141/367 (38%), Gaps = 47/367 (12%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A+++F +M E G P Y L+ YC+ + EA + L M Y++LI
Sbjct: 555 AQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEA-LKLKDMSERDGISSSTEMYNSLI 613
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
+ + + L +M R ++PN VT ++ G+ GM D+ M++
Sbjct: 614 TGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGI- 672
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP------------------ETR-- 322
P++ + I+S G++D + + IDP ET+
Sbjct: 673 APNIIIGSKIVSSLYRHGKIDEANLILHQIAD--IDPIAAHAHSVELPKSDLRHLETQKI 730
Query: 323 -----------------TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+NI I K + D + ++ + F + TY ++I A
Sbjct: 731 VDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHA 790
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---I 422
S +G + M G+ + + LING +G + + RL +KL +
Sbjct: 791 CSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDR---ARRLFNKLARKGL 847
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
+ V YN +I K E + +M+E+ P S T+S + EG +++
Sbjct: 848 SPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVG 907
Query: 483 LEQEKLQ 489
L E ++
Sbjct: 908 LLNEMMK 914
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/358 (18%), Positives = 141/358 (39%), Gaps = 38/358 (10%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+L+ F++ +QP ++P +Y K++ +L ++ + R NE+V
Sbjct: 115 SLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELV--------------- 159
Query: 187 AAYCRNSLI-----DEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
C+N+ I DE + P + ++K + + ++ +M
Sbjct: 160 -VLCKNNYIASAVWDELVSVYREFSFSPT------VFDMILKVFAEKGMTKFALCVFDNM 212
Query: 242 DERSVTP-----NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
+ P N++ N+V G + + + G+L PD+++ +++ +
Sbjct: 213 GKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGIL------PDIFSYTIMVNAY 266
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
+G+VD + ++ +P T+N LI Y V+ M + P S
Sbjct: 267 CKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENS 326
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
TY +I+ + G + E M + + D + LI+ Y AG +
Sbjct: 327 RTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDA 386
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
K+ + N N++I+ K + + V MK+ + +PDS ++ + + + K+
Sbjct: 387 MLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQ 444
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 73/164 (44%), Gaps = 2/164 (1%)
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
+R F P F++++ + +K M V + M K + + N+++ G+
Sbjct: 179 YREFSFSPTV--FDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGE 236
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNA 431
A +EQM A G+ D ++ ++N Y G + + V+ + NV YN+
Sbjct: 237 AFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNS 296
Query: 432 VISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+I + D+ ++V M EK +S T++++ + Y K G
Sbjct: 297 LIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRG 340
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 104/279 (37%), Gaps = 35/279 (12%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ G + A + +M+++GI P + + ++++ R+ IDEA +
Sbjct: 639 PNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLI 698
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L+Q+ + ++ L K+ + + + I + N + NI + G
Sbjct: 699 LHQIADIDPIAAHAHSVE-LPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLC 757
Query: 262 KAGMFDQMERVLSGMLESATCK----------------------------------PDVW 287
K+ D + R+LS +L C P++
Sbjct: 758 KSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIV 817
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
N +++ G +D R + K G+ P T+N LI Y K + + + M
Sbjct: 818 VYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKM 877
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
R+ +S TY+ +I G ++ +M G
Sbjct: 878 REEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG 916
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 81/210 (38%), Gaps = 2/210 (0%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P V+ M IL VFA KG ++ G P R+ N L+ + K V
Sbjct: 186 PTVFDM--ILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLV 243
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
E M L +Y ++ A+ G ++M + + T+ LI+GY +
Sbjct: 244 YEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVS 303
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
G + L S+ I EN Y +I K + + E++ M EK+ D
Sbjct: 304 LGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHV 363
Query: 464 FSIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
+ ++ AY G D + L++ L+
Sbjct: 364 YGVLIHAYCTAGRVDDALRIRDAMLKVGLK 393
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 3/142 (2%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+ P TY L+ G+ A + ++M+ G+ P +Y AL+ C++ +D A
Sbjct: 777 FCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRAR 836
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
N++ P V TY+TLI C E +E L M E + P+++T + ++
Sbjct: 837 RLFNKLAR-KGLSPTVVTYNTLIDGYCKGGRTTEALE-LKDKMREEGICPSSITYSTLIH 894
Query: 259 GYGKAGMFDQMERVLSGMLESA 280
G G +Q +L+ M+++
Sbjct: 895 GLYMEGKSEQSVGLLNEMMKAG 916
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 155/366 (42%), Gaps = 37/366 (10%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+ A +V E + E+ P TY LL L +S + +LAR+VF EM G +P P Y
Sbjct: 103 RVMDAYKVLEKMVEESIV-PNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITY 161
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
L+ R IDEA + + ++L DV T +T++ A R + ++M
Sbjct: 162 GTLIQHLSRAGEIDEALRVMIEQRSL-ELPTDVITCTTIVGGLCKASRLDDALKFMEEMR 220
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVL-------SGMLESAT--------CK---- 283
+ V PN VT + ++ G+ + G D++ R G LE+A CK
Sbjct: 221 QMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYL 280
Query: 284 ----------------PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
PDV T + +++ FA GQ D E R G+ P+ T++ L
Sbjct: 281 DRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTL 340
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
I K+R + ++E M P TYN+V++ G + +E M
Sbjct: 341 INVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRC 400
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
D T+ ++NG + AG+ + L + + + Y+ VI++ +A L E
Sbjct: 401 SPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACG 460
Query: 448 VYKRMK 453
+Y M+
Sbjct: 461 MYHGME 466
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 158/360 (43%), Gaps = 10/360 (2%)
Query: 129 QVFEMLKE-QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
Q E+++E Y P Y ++ L ++ + A KV +MVEE I P YT LL
Sbjct: 72 QALELVRELSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLN 131
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVT 247
CR++ A +MK C+P+ TY TLI+ A E+ E L +++RS+
Sbjct: 132 GLCRSNKTKLAREVFQEMKR-NGCKPNPITYGTLIQHLSRA--GEIDEALRVMIEQRSLE 188
Query: 248 --PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ +T ++GG KA D + + M + +P+ T + ++ F G++D +
Sbjct: 189 LPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGV-RPNEVTYSNLVHGFRQHGELDRV 247
Query: 306 ERWYE--KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
R++E K R G E + + A K D+ +E +R+ TY+ +I
Sbjct: 248 IRFFEEEKARKGG-SLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLI 306
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
F+ G E M G+K D T+ LIN F + L
Sbjct: 307 NTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSP 366
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
NV YN+V+ K+ + E+ RVY+ M + C PD T+SI+ +K GM D L
Sbjct: 367 PNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKL 426
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 118/255 (46%), Gaps = 4/255 (1%)
Query: 76 VSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKK--QWFQALQVFEM 133
++ T+I G K + + + K +E + N V + H ++ + + ++ FE
Sbjct: 194 ITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEE 253
Query: 134 LKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNS 193
K + + Y L L K+G + ARK E+ + G+ P Y+ L+ + R
Sbjct: 254 EKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAG 313
Query: 194 LIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQ 253
D + L M+ +PDV TYSTLI +F+ L + M+ PN VT
Sbjct: 314 QFDASLELLEDMRR-NGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTY 372
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
N V+ G K+G D++ RV ML+S C PDV T + I++ + G +D + +E +
Sbjct: 373 NSVMDGLCKSGKMDEVHRVYEMMLKS-RCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIK 431
Query: 314 NFGIDPETRTFNILI 328
+ P+ ++++I
Sbjct: 432 SSREGPDAAAYSMVI 446
>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
gi|224029903|gb|ACN34027.1| unknown [Zea mays]
gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
Length = 819
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 147/317 (46%), Gaps = 5/317 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL+ F++LK+ +P +Y LL G+S QPE AR+VFNEM + +P Y AL
Sbjct: 383 EALETFKLLKQNGL-RPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNAL 441
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ AY ++ EA L++M+ QPDV + STL+ AC + I+ + R
Sbjct: 442 IDAYGSAGMLKEAISLLHEMEQ-DGIQPDVISISTLLTACGRCKQLTKIDIILAAAKSRG 500
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ NTV N +G Y G + + VL + + KPD T N ++S G+
Sbjct: 501 IQLNTVAYNSGIGSYLSLGDYKK-ALVLYTSMRAGNVKPDAVTYNILISGSCKLGRYVES 559
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ-FPWTSSTYNNVIE 364
+++E + I ++ +I +Y K+ + +S M++ FP TY +I+
Sbjct: 560 LKFFEDMLDLNIHLTKEVYSSVICSYVKQGKLTEAASTFNSMKETGCFP-DVLTYTTLIK 618
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
A+SD G + F++M G + D L+ G +V+ + + +I
Sbjct: 619 AYSDDGSWRRAWDLFKEMENNGTQPDAIVCSSLMEALNKGGQPERVLQLIEFMKQKKIQL 678
Query: 425 NVSFYNAVISACIKADD 441
N Y +IS+C D
Sbjct: 679 NQKAYFEIISSCTMLRD 695
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 158/362 (43%), Gaps = 38/362 (10%)
Query: 126 QALQVFEMLKEQ-PFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+A+++F ++E+ P TY ++ GQ E + VF+ MV EG+ P Y A
Sbjct: 311 EAIELFNSMRERRTTCHPDVVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNA 370
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
LL AY + + EA T +K +PD+ +Y++L+ A + + E ++ +M +
Sbjct: 371 LLGAYASHGMHTEALETFKLLKQ-NGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKN 429
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ PN V+ N ++ YG A GML+ A +S+
Sbjct: 430 ACKPNKVSYNALIDAYGSA-----------GMLKEA------------ISLL-------- 458
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ GI P+ + + L+ A G+ + K+ ++ + + YN+ I
Sbjct: 459 -----HEMEQDGIQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIG 513
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
++ +GD K + M A +K D T+ LI+G G + + + L I
Sbjct: 514 SYLSLGDYKKALVLYTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHL 573
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
Y++VI + +K L E + MKE C PD T++ + +AY+ +G + + L
Sbjct: 574 TKEVYSSVICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLF 633
Query: 485 QE 486
+E
Sbjct: 634 KE 635
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 174/358 (48%), Gaps = 16/358 (4%)
Query: 157 SGQPELARKVFNEMV-EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
SG + A VF M +E ++Y ++ + R++ +D+A +M+ C+P+
Sbjct: 130 SGSLKHAVHVFRWMKNQENYCARNDIYGMMIRLHARHNKVDQARGLFFEMQEW-RCKPNT 188
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
TY++LI A A ++ + DM ++ P+ T N V+ G AG + + +
Sbjct: 189 DTYNSLIHAHARAGQWCWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALELCKK 248
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
M E+ PD+ T N +LS F N Q ++E ++ + P+T T NI+I K
Sbjct: 249 MTENGV-GPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKIG 307
Query: 336 MYDKMSSVMEYMRKLQFPWTSS--TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+Y + + MR+ + TY +++ ++S G A++ + F+ M AEG++ + +
Sbjct: 308 LYGEAIELFNSMRERRTTCHPDVVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIVS 367
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+ L+ YA+ G+ + + + +L + + ++ Y ++++A ++ + V+ M+
Sbjct: 368 YNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEMR 427
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDKVYAL----EQEKLQ-------MLLEASGHWQQ 500
+ C+P+ +++ + +AY GM + +L EQ+ +Q LL A G +Q
Sbjct: 428 KNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTACGRCKQ 485
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 150/348 (43%), Gaps = 2/348 (0%)
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
+ F+ Q Y +Y LL +L KSG+ + +N+M+ G P Y LL
Sbjct: 1 MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLR 60
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVT 247
+ C+ +EA M C P+V++YS LI + + L +M +
Sbjct: 61 SLCQAQRFEEARSVFRGMAA-QGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQ 119
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMER 307
PN VT +L G K G + + S M+ C PD N ++ F+ KG + R
Sbjct: 120 PNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRG-CPPDGVVYNVLIDGFSKKGDMGEAYR 178
Query: 308 WYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS 367
+E+ G P T+N L+ + +K + ++ S+ + M + T+NN+++ F
Sbjct: 179 LFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFC 238
Query: 368 DMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVS 427
MGD F +M + G D ++ L+ G + G H+ +R + + ++
Sbjct: 239 KMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIV 298
Query: 428 FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
YN +I K+ L +++ + + PD+ ++S + + + G
Sbjct: 299 SYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAG 346
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 142/333 (42%), Gaps = 8/333 (2%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+QP TY LL L K G+ + A +F+ MV G P +Y L+ + + + EA+
Sbjct: 118 HQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAY 177
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+M C P V+TY++L+ F +++L++DM + PN T N +L G
Sbjct: 178 RLFEEMLE-KGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDG 236
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ K G + R+ M S C PDV + NT++ +KG+ +R + G+ P
Sbjct: 237 FCKMGDMVEAHRLFLEM-RSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGP 295
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ ++NILI Y K D + + K + +Y+ +I+ G F
Sbjct: 296 DIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVF 355
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
+ M A G D L+ G + + K + + YN ++ KA
Sbjct: 356 KDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKA 415
Query: 440 ---DDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
DD+ E ++ + E+ PD E ++ E
Sbjct: 416 KRSDDVCE---IFHELTERGFSPDVEISKVILE 445
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 127/308 (41%), Gaps = 37/308 (12%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y LL ++ D + T N M C P+ YTY L+++ A RFE ++++ M
Sbjct: 20 YNYLLEVLAKSGRCDHVYGTYNDMLG-AGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ +PN + +I++ G + D+ +L+ M++ +P+V T ++LS G+
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGH-QPNVVTYGSLLSGLCKMGK 137
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ + + G P+ +N+L
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVL---------------------------------- 163
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
I+ FS GD FE+M +G T+ L++G++ G F +V S + +
Sbjct: 164 -IDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
N+ +N ++ K D++E R++ M+ C PD +++ + +G +
Sbjct: 223 CVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQ 282
Query: 482 ALEQEKLQ 489
L +E ++
Sbjct: 283 RLLREMIR 290
>gi|357487731|ref|XP_003614153.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515488|gb|AES97111.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 691
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 158/321 (49%), Gaps = 5/321 (1%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
LG S + A + F +M ++G+ E + AL+ ++C L+ EA + ++M+
Sbjct: 296 LGHSAKD--AWQFFEKMNQKGVRWGKEAFGALIKSFCVEGLLSEALIIQSEMEK-KGISS 352
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
+ Y+TL+ A + R E E L+ +M + + P VT NI++ Y + +E +L
Sbjct: 353 NAIVYNTLMDAYCKSNRVEEAEGLFVEMKAKGIKPTAVTFNILMYAYSRRMQPKIVESLL 412
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQV-DMMERWYEKFRNFGIDPETRTFNILIGAYG 332
+ M + KP+ + ++S + + ++ DM + K + GI P + ++ +I AY
Sbjct: 413 AEMKDFG-LKPNANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTAMIHAYS 471
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
++K +V E M + + TY +++AF +GD + + ++ M +E +K
Sbjct: 472 VSGWHEKAYAVFENMIREGIKPSIETYTTLLDAFRRVGDTETLMKIWKLMMSEKVKGTQV 531
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
TF L++G+A GLF + + K+ + V YN +I+A + + ++ K M
Sbjct: 532 TFNILVDGFAKQGLFMEARDVISEFGKIGLQPTVMTYNMLINAYARGGLDSNIPQLLKEM 591
Query: 453 KEKHCRPDSETFSIMTEAYAK 473
+ RPDS T+S + A+ +
Sbjct: 592 EALRLRPDSITYSTVIYAFVR 612
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 130/310 (41%), Gaps = 43/310 (13%)
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP--DVYTYSTLIKACVDAMRFELIE 235
TP++YT L R + D+ V + LP+ + +V Y+ I + R++
Sbjct: 212 TPKVYTTLFPLLGRARMGDKLMVLF---RNLPSSKEFRNVRVYNAAISGLLYDGRYKDAW 268
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
+Y+ M+ V P+ VT +I++ G K G SA D W
Sbjct: 269 KVYESMETDGVLPDHVTCSIMIIGMRKLG-------------HSAK---DAW-------- 304
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
+++EK G+ F LI ++ + + + + M K
Sbjct: 305 -----------QFFEKMNQKGVRWGKEAFGALIKSFCVEGLLSEALIIQSEMEKKGISSN 353
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
+ YN +++A+ + E F +M A+G+K TF L+ Y+ + K++ S+
Sbjct: 354 AIVYNTLMDAYCKSNRVEEAEGLFVEMKAKGIKPTAVTFNILMYAYSRR-MQPKIVESLL 412
Query: 416 LASK-LQIAENVSFYNAVISACIKADDLMEMER-VYKRMKEKHCRPDSETFSIMTEAYAK 473
K + N + Y +ISA + + +M + +MK+ +P S +++ M AY+
Sbjct: 413 AEMKDFGLKPNANSYTCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTAMIHAYSV 472
Query: 474 EGMNDKVYAL 483
G ++K YA+
Sbjct: 473 SGWHEKAYAV 482
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 171/401 (42%), Gaps = 50/401 (12%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F + E +P T+ L+ L + G+ A + + M+E+G++PT Y +
Sbjct: 167 EALNLFHQMFETT-CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ A L +M+ + + P+V YS +I + R + L+ +M E+
Sbjct: 226 VDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG 285
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+ T N ++ G+ +G + E++L MLE PDV T N +++ F +G+
Sbjct: 286 IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI-SPDVVTYNALINAFVKEGKFFEA 344
Query: 306 ERWYEKFRNFGIDPETRT-----------------------------------FNILIGA 330
E Y++ GI P T T FN LI
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG 404
Query: 331 Y-GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
Y G KR+ D M + E M + ++TYN +I F +GD ++M + G+
Sbjct: 405 YCGAKRIDDGMELLHE-MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQ-----------IAENVSFYNAVISACIK 438
D T L++G + G + ++ K + + +V YN +IS I
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+E E +Y+ M + PD+ T+S M + K+ D+
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 564
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 158/377 (41%), Gaps = 14/377 (3%)
Query: 114 TFSDHVLKK-QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE 172
T D + KK AL + ++E P Y ++ L K G+ A+ +F EM E
Sbjct: 224 TIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283
Query: 173 EGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE 232
+GI P Y +++ +C + +A L +M PDV TY+ LI A V +F
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE-RKISPDVVTYNALINAFVKEGKFF 342
Query: 233 LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTI 292
E LY +M R + PNT+T + ++ G+ K D E + ++ + C P++ T NT+
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFY-LMATKGCSPNLITFNTL 401
Query: 293 LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF 352
+ + ++D + G+ +T T+N LI + + +++ M
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Query: 353 PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE-----------GMKADTKTFCCLINGY 401
T + +++ D G K F+ M G++ D +T+ LI+G
Sbjct: 462 CPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGL 521
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
N G F + I + Y+++I K L E +++ M K P+
Sbjct: 522 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNV 581
Query: 462 ETFSIMTEAYAKEGMND 478
TF+ + Y K G D
Sbjct: 582 VTFTTLINGYCKAGRVD 598
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 140/343 (40%), Gaps = 54/343 (15%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W A Q+ + + E+ P TY L+ K G+ A ++++EM+ GI P Y
Sbjct: 305 RWSDAEQLLQEMLERKI-SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITY 363
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
++++ +C+ + +D A M T C P++ T++TLI A R + L +M
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMAT-KGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC-------------------- 282
E + +T T N ++ G+ G + +L M+ S C
Sbjct: 423 ETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482
Query: 283 -------------------------KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
+PDV T N ++S N+G+ E YE+ + GI
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P+T T++ +I K+ D+ + + + M F T+ +I + G
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISS 413
F +M G+ A+ T+ LI G+ G +F ++ISS
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISS 645
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 165/408 (40%), Gaps = 22/408 (5%)
Query: 81 IPGYRSKRTPIKNLKK----KLERKAKAKAWVNTVAETFSDHVLK--------KQWFQAL 128
+ G++ +P ++ + + R AKA + F LK K A+
Sbjct: 5 VCGFKCSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAI 64
Query: 129 QVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
+F +ML+ +P P + KL+ ++ + +P+L ++ +M + I +T L+
Sbjct: 65 DLFSDMLRSRPL--PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIK 122
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSV 246
+C S + A T ++ L PDV T++TL+ CV+ E + L+ M E +
Sbjct: 123 CFCSCSKLPFALSTFGKLTKL-GLHPDVVTFNTLLHGLCVEDRVSEAL-NLFHQMFETTC 180
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PN VT ++ G + G + +L M+E +P T TI+ KG
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL-QPTQITYGTIVDGMCKKGDTVSAL 239
Query: 307 RWYEKFRNFG-IDPETRTFNILIGAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
K I P ++ +I + K R D + E K FP TYN++I
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP-DLFTYNSMIV 298
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
F G E ++M + D T+ LIN + G F + I
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
N Y+++I K + L E ++ M K C P+ TF+ + + Y
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 140/318 (44%), Gaps = 9/318 (2%)
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
E A +F++M+ P+ + L+ R D ++L Q + D+Y+++
Sbjct: 61 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPD-LVISLYQKMERKQIRCDIYSFTI 119
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
LIK + + + + + + P+ VT N +L G + + M E+
Sbjct: 120 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFET- 178
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
TC+P+V T T+++ +G++ ++ G+ P T+ ++ KK
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK---GDT 235
Query: 341 SSVMEYMRKLQ----FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
S + +RK++ Y+ +I++ G + F +M +G+ D T+
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
+I G+ ++G + ++ + +I+ +V YNA+I+A +K E E +Y M +
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 457 CRPDSETFSIMTEAYAKE 474
P++ T+S M + + K+
Sbjct: 356 IIPNTITYSSMIDGFCKQ 373
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 130/330 (39%), Gaps = 7/330 (2%)
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
A F ++ + G+ P + LL C + EA +QM C+P+V T++TL
Sbjct: 132 FALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE-TTCRPNVVTFTTL 190
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
+ R L M E + P +T ++ G K G +L M E +
Sbjct: 191 MNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSH 250
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
P+V + I+ G+ + + + + GI P+ T+N +I + +
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+++ M + + TYN +I AF G E +++M G+ +T T+ +I+G+
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA---DDLMEMERVYKRMKEKHCR 458
L + + N+ +N +I A DD ME+ M E
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL---LHEMTETGLV 427
Query: 459 PDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
D+ T++ + + G + L QE +
Sbjct: 428 ADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 126 QALQVFEMLKE--------QPF--YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
AL++F+++++ PF +P TY L+ L G+ A +++ EM GI
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
P Y++++ C+ S +DEA + M + + P+V T++TLI A R +
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGS-KSFSPNVVTFTTLINGYCKAGRVDDGL 601
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
L+ +M R + N +T ++ G+ K G + + M+ S PD T+ +L+
Sbjct: 602 ELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV-YPDTITIRNMLTG 660
Query: 296 FANKGQVDMMERWYEKFR 313
+K ++ EK +
Sbjct: 661 LWSKEELKRAVAMLEKLQ 678
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 92/221 (41%), Gaps = 15/221 (6%)
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
+E + D+++ ++ F + ++ + K G+ P+ TFN L+ +
Sbjct: 105 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVE-- 162
Query: 337 YDKMSSVMEYMRKLQFPWTSS----TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
D++S + ++ F T T+ ++ G ++M +G++
Sbjct: 163 -DRVSEALNLFHQM-FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI 220
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQ----IAENVSFYNAVISACIKADDLMEMERV 448
T+ +++G G +S++ L K++ I NV Y+A+I + K + + +
Sbjct: 221 TYGTIVDGMCKKG---DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ M+EK PD T++ M + G L QE L+
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 46/97 (47%)
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
+++M + ++ D +F LI + + +S+ +KL + +V +N ++
Sbjct: 102 YQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCV 161
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
D + E ++ +M E CRP+ TF+ + +EG
Sbjct: 162 EDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREG 198
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 154/363 (42%), Gaps = 13/363 (3%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL + ++E +P Y ++ L K G+ A ++ EM E+GI P Y ++
Sbjct: 232 ALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMI 291
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+C + EA L +M P+V TYS LI A V +F E LY +M R +
Sbjct: 292 DGFCSSGRWSEAQRLLQEMLE-RKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGI 350
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PNT+T N ++ G+ K D E + ++ + C PDV+T NT++ + ++D
Sbjct: 351 IPNTITYNSMIDGFCKQNRLDAAEHMFY-VMATKGCSPDVFTFNTLIDGYCGAKRIDDGT 409
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ G+ +T T+N LI + + + + M T N +++
Sbjct: 410 ELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 469
Query: 367 SDMGDAKHMEYTFEQMHAE-----------GMKADTKTFCCLINGYANAGLFHKVISSVR 415
D G K F+ M G++ D +T+ LI+G N G F + +
Sbjct: 470 CDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYK 529
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
I N Y+++I+ K L E +++ M K PD TF+ + Y K G
Sbjct: 530 EMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAG 589
Query: 476 MND 478
D
Sbjct: 590 RVD 592
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 164/399 (41%), Gaps = 50/399 (12%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F + +P T+ L+ L + G+ A + + MVE+G++P Y +
Sbjct: 165 EALDLFHQM-----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTI 219
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ A L +M+ + + +P+V YS +I R LY +M E+
Sbjct: 220 VDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKG 279
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE--------------SATCK-------- 283
+ P+ T N ++ G+ +G + + +R+L MLE +A K
Sbjct: 280 IFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAE 339
Query: 284 ------------PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
P+ T N+++ F + ++D E + G P+ TFN LI Y
Sbjct: 340 ELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGY 399
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
+ D + ++ M + ++TYN +I F +GD +QM + G+ D
Sbjct: 400 CGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDI 459
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQ-----------IAENVSFYNAVISACIKAD 440
T L++G + G + + K + + +V YN +IS I
Sbjct: 460 VTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEG 519
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+E E +YK M + P++ T+S M K+ D+
Sbjct: 520 KFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDE 558
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 148/340 (43%), Gaps = 27/340 (7%)
Query: 94 LKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVF-EMLKEQPFYQPKEGTYMKLLV 152
L++ LERK V T + + +V ++++F+A +++ EML P TY ++
Sbjct: 307 LQEMLERKINPN--VVTYSALINAYVKERKFFEAEELYDEMLPRGII--PNTITYNSMID 362
Query: 153 LLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQ 212
K + + A +F M +G P + L+ YC ID+ L++M T
Sbjct: 363 GFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEM-TETGLV 421
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------M 265
D TY+TLI L Q M V P+ VT N +L G G M
Sbjct: 422 ADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEM 481
Query: 266 FDQMERVLSGMLESAT-----CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
F M++ S M A+ +PDV T N ++S N+G+ E Y++ + GI P
Sbjct: 482 FKAMQK--SKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPN 539
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T T++ +I K+ D+ + + + M F T+N ++ + G F
Sbjct: 540 TITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFC 599
Query: 381 QMHAEGMKADTKTFCCLINGYANAG-------LFHKVISS 413
+M G+ AD T+ LI+G+ G +F ++ISS
Sbjct: 600 EMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISS 639
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 143/351 (40%), Gaps = 14/351 (3%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
A+ +F +M++ +P P + KL+ ++ + +P+L ++ +M + I +
Sbjct: 60 DAIDLFSDMVRSRPL--PSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDE 243
L+ +C S + A T ++ L QPDV T+STL+ CV+ E ++ +Q
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKL-GFQPDVVTFSTLLHGLCVEDRVSEALDLFHQ---- 172
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
PN VT ++ G + G + +L M+E +P+ T TI+ G
Sbjct: 173 -MCRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGL-QPNQITYGTIVDGMCKIGDTV 230
Query: 304 MMERWYEKFRNFG-IDPETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
K I P ++ +I G + R D + E K FP TYN
Sbjct: 231 SALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFP-DLFTYNC 289
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+I+ F G + ++M + + T+ LIN Y F +
Sbjct: 290 MIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRG 349
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
I N YN++I K + L E ++ M K C PD TF+ + + Y
Sbjct: 350 IIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYC 400
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 109/262 (41%), Gaps = 22/262 (8%)
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER-----VLSGMLESATCKPDVWTMNT 291
L+ DM P+ + N ++G + +MER L +E DV++ N
Sbjct: 64 LFSDMVRSRPLPSVIDFNKLMG------VVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
++ F + ++ + K G P+ TF+ L+ + D++S ++ ++
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVE---DRVSEALDLFHQMC 174
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
P T+ ++ G ++M +G++ + T+ +++G G +
Sbjct: 175 RP-NVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIG---DTV 230
Query: 412 SSVRLASKLQ----IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
S++ L K++ I NV Y+A+I K + +Y M+EK PD T++ M
Sbjct: 231 SALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCM 290
Query: 468 TEAYAKEGMNDKVYALEQEKLQ 489
+ + G + L QE L+
Sbjct: 291 IDGFCSSGRWSEAQRLLQEMLE 312
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 171/401 (42%), Gaps = 50/401 (12%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F + E +P T+ L+ L + G+ A + + M+E+G++PT Y +
Sbjct: 167 EALNLFHQMFETT-CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ A L +M+ + + P+V YS +I + R + L+ +M E+
Sbjct: 226 VDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG 285
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+ T N ++ G+ +G + E++L MLE PDV T N +++ F +G+
Sbjct: 286 IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI-SPDVVTYNALINAFVKEGKFFEA 344
Query: 306 ERWYEKFRNFGIDPETRT-----------------------------------FNILIGA 330
E Y++ GI P T T FN LI
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG 404
Query: 331 Y-GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
Y G KR+ D M + E M + ++TYN +I F +GD ++M + G+
Sbjct: 405 YCGAKRIDDGMELLHE-MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQ-----------IAENVSFYNAVISACIK 438
D T L++G + G + ++ K + + +V YN +IS I
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+E E +Y+ M + PD+ T+S M + K+ D+
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 564
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 158/377 (41%), Gaps = 14/377 (3%)
Query: 114 TFSDHVLKK-QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE 172
T D + KK AL + ++E P Y ++ L K G+ A+ +F EM E
Sbjct: 224 TIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283
Query: 173 EGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE 232
+GI P Y +++ +C + +A L +M PDV TY+ LI A V +F
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE-RKISPDVVTYNALINAFVKEGKFF 342
Query: 233 LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTI 292
E LY +M R + PNT+T + ++ G+ K D E + ++ + C P++ T NT+
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFY-LMATKGCSPNLITFNTL 401
Query: 293 LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF 352
+ + ++D + G+ +T T+N LI + + +++ M
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Query: 353 PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE-----------GMKADTKTFCCLINGY 401
T + +++ D G K F+ M G++ D +T+ LI+G
Sbjct: 462 CPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGL 521
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
N G F + I + Y+++I K L E +++ M K P+
Sbjct: 522 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNV 581
Query: 462 ETFSIMTEAYAKEGMND 478
TF+ + Y K G D
Sbjct: 582 VTFTTLINGYCKAGRVD 598
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 140/343 (40%), Gaps = 54/343 (15%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W A Q+ + + E+ P TY L+ K G+ A ++++EM+ GI P Y
Sbjct: 305 RWSDAEQLLQEMLERKI-SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITY 363
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
++++ +C+ + +D A M T C P++ T++TLI A R + L +M
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMAT-KGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC-------------------- 282
E + +T T N ++ G+ G + +L M+ S C
Sbjct: 423 ETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482
Query: 283 -------------------------KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
+PDV T N ++S N+G+ E YE+ + GI
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P+T T++ +I K+ D+ + + + M F T+ +I + G
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISS 413
F +M G+ A+ T+ LI G+ G +F ++ISS
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISS 645
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 165/408 (40%), Gaps = 22/408 (5%)
Query: 81 IPGYRSKRTPIKNLKK----KLERKAKAKAWVNTVAETFSDHVLK--------KQWFQAL 128
+ G++ +P ++ + + R AKA + F LK K A+
Sbjct: 5 VCGFKCSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAI 64
Query: 129 QVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
+F +ML+ +P P + KL+ ++ + +P+L ++ +M + I +T L+
Sbjct: 65 DLFSDMLRSRPL--PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIK 122
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSV 246
+C S + A T ++ L PDV T++TL+ CV+ E + L+ M E +
Sbjct: 123 CFCSCSKLPFALSTFGKITKL-GLHPDVVTFNTLLHGLCVEDRVSEAL-NLFHQMFETTC 180
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PN VT ++ G + G + +L M+E +P T TI+ KG
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL-QPTQITYGTIVDGMCKKGDTVSAL 239
Query: 307 RWYEKFRNFG-IDPETRTFNILIGAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
K I P ++ +I + K R D + E K FP TYN++I
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP-DLFTYNSMIV 298
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
F G E ++M + D T+ LIN + G F + I
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
N Y+++I K + L E ++ M K C P+ TF+ + + Y
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 140/318 (44%), Gaps = 9/318 (2%)
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
E A +F++M+ P+ + L+ R D ++L Q + D+Y+++
Sbjct: 61 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPD-LVISLYQKMERKQIRCDIYSFTI 119
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
LIK + + + + + + P+ VT N +L G + + M E+
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFET- 178
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
TC+P+V T T+++ +G++ ++ G+ P T+ ++ KK
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK---GDT 235
Query: 341 SSVMEYMRKLQ----FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
S + +RK++ Y+ +I++ G + F +M +G+ D T+
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
+I G+ ++G + ++ + +I+ +V YNA+I+A +K E E +Y M +
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 457 CRPDSETFSIMTEAYAKE 474
P++ T+S M + + K+
Sbjct: 356 IIPNTITYSSMIDGFCKQ 373
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 130/330 (39%), Gaps = 7/330 (2%)
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
A F ++ + G+ P + LL C + EA +QM C+P+V T++TL
Sbjct: 132 FALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE-TTCRPNVVTFTTL 190
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
+ R L M E + P +T ++ G K G +L M E +
Sbjct: 191 MNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSH 250
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
P+V + I+ G+ + + + + GI P+ T+N +I + +
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+++ M + + TYN +I AF G E +++M G+ +T T+ +I+G+
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA---DDLMEMERVYKRMKEKHCR 458
L + + N+ +N +I A DD ME+ M E
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL---LHEMTETGLV 427
Query: 459 PDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
D+ T++ + + G + L QE +
Sbjct: 428 ADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 126 QALQVFEMLKE--------QPF--YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
AL++F+++++ PF +P TY L+ L G+ A +++ EM GI
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
P Y++++ C+ S +DEA + M + + P+V T++TLI A R +
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGS-KSFSPNVVTFTTLINGYCKAGRVDDGL 601
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
L+ +M R + N +T ++ G+ K G + + M+ S PD T+ +L+
Sbjct: 602 ELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV-YPDTITIRNMLTG 660
Query: 296 FANKGQVDMMERWYEKFR 313
+K ++ EK +
Sbjct: 661 LWSKEELKRAVAMLEKLQ 678
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 92/221 (41%), Gaps = 15/221 (6%)
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
+E + D+++ ++ F + ++ + K G+ P+ TFN L+ +
Sbjct: 105 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVE-- 162
Query: 337 YDKMSSVMEYMRKLQFPWTSS----TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
D++S + ++ F T T+ ++ G ++M +G++
Sbjct: 163 -DRVSEALNLFHQM-FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI 220
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQ----IAENVSFYNAVISACIKADDLMEMERV 448
T+ +++G G +S++ L K++ I NV Y+A+I + K + + +
Sbjct: 221 TYGTIVDGMCKKG---DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ M+EK PD T++ M + G L QE L+
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 46/97 (47%)
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
+++M + ++ D +F LI + + +S+ +KL + +V +N ++
Sbjct: 102 YQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCV 161
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
D + E ++ +M E CRP+ TF+ + +EG
Sbjct: 162 EDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREG 198
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 171/401 (42%), Gaps = 50/401 (12%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F + E +P T+ L+ L + G+ A + + M+E+G++PT Y +
Sbjct: 167 EALNLFHQMFETT-CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ A L +M+ + + P+V YS +I + R + L+ +M E+
Sbjct: 226 VDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG 285
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+ T N ++ G+ +G + E++L MLE PDV T N +++ F +G+
Sbjct: 286 IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI-SPDVVTYNALINAFVKEGKFFEA 344
Query: 306 ERWYEKFRNFGIDPETRT-----------------------------------FNILIGA 330
E Y++ GI P T T FN LI
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG 404
Query: 331 Y-GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
Y G KR+ D M + E M + ++TYN +I F +GD ++M + G+
Sbjct: 405 YCGAKRIDDGMELLHE-MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQ-----------IAENVSFYNAVISACIK 438
D T L++G + G + ++ K + + +V YN +IS I
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+E E +Y+ M + PD+ T+S M + K+ D+
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 564
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 158/377 (41%), Gaps = 14/377 (3%)
Query: 114 TFSDHVLKK-QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE 172
T D + KK AL + ++E P Y ++ L K G+ A+ +F EM E
Sbjct: 224 TIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283
Query: 173 EGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE 232
+GI P Y +++ +C + +A L +M PDV TY+ LI A V +F
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE-RKISPDVVTYNALINAFVKEGKFF 342
Query: 233 LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTI 292
E LY +M R + PNT+T + ++ G+ K D E + ++ + C P++ T NT+
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFY-LMATKGCSPNLITFNTL 401
Query: 293 LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF 352
+ + ++D + G+ +T T+N LI + + +++ M
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Query: 353 PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE-----------GMKADTKTFCCLINGY 401
T + +++ D G K F+ M G++ D +T+ LI+G
Sbjct: 462 CPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGL 521
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
N G F + I + Y+++I K L E +++ M K P+
Sbjct: 522 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNV 581
Query: 462 ETFSIMTEAYAKEGMND 478
TF+ + Y K G D
Sbjct: 582 VTFTTLINGYCKAGRVD 598
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 140/343 (40%), Gaps = 54/343 (15%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W A Q+ + + E+ P TY L+ K G+ A ++++EM+ GI P Y
Sbjct: 305 RWSDAEQLLQEMLERKI-SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITY 363
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
++++ +C+ + +D A M T C P++ T++TLI A R + L +M
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMAT-KGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC-------------------- 282
E + +T T N ++ G+ G + +L M+ S C
Sbjct: 423 ETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482
Query: 283 -------------------------KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
+PDV T N ++S N+G+ E YE+ + GI
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P+T T++ +I K+ D+ + + + M F T+ +I + G
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISS 413
F +M G+ A+ T+ LI G+ G +F ++ISS
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISS 645
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 164/408 (40%), Gaps = 22/408 (5%)
Query: 81 IPGYRSKRTPIKNLKK----KLERKAKAKAWVNTVAETFSDHVLK--------KQWFQAL 128
+ G++ +P ++ + + R AKA + F LK K A+
Sbjct: 5 VCGFKCSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAI 64
Query: 129 QVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
+F +ML+ +P P + KL+ ++ + +P+L ++ +M + I + L+
Sbjct: 65 DLFSDMLRSRPL--PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIK 122
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSV 246
+C S + A T ++ L PDV T++TL+ CV+ E + L+ M E +
Sbjct: 123 CFCSCSKLPFALSTFGKITKL-GLHPDVVTFTTLLHGLCVEDRVSEAL-NLFHQMFETTC 180
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PN VT ++ G + G + +L M+E +P T TI+ KG
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL-QPTQITYGTIVDGMCKKGDTVSAL 239
Query: 307 RWYEKFRNFG-IDPETRTFNILIGAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
K I P ++ +I + K R D + E K FP TYN++I
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP-DLFTYNSMIV 298
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
F G E ++M + D T+ LIN + G F + I
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
N Y+++I K + L E ++ M K C P+ TF+ + + Y
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 131/330 (39%), Gaps = 7/330 (2%)
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
A F ++ + G+ P +T LL C + EA +QM C+P+V T++TL
Sbjct: 132 FALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFE-TTCRPNVVTFTTL 190
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
+ R L M E + P +T ++ G K G +L M E +
Sbjct: 191 MNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSH 250
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
P+V + I+ G+ + + + + GI P+ T+N +I + +
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+++ M + + TYN +I AF G E +++M G+ +T T+ +I+G+
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA---DDLMEMERVYKRMKEKHCR 458
L + + N+ +N +I A DD ME+ M E
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL---LHEMTETGLV 427
Query: 459 PDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
D+ T++ + + G + L QE +
Sbjct: 428 ADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 139/318 (43%), Gaps = 9/318 (2%)
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
E A +F++M+ P+ + L+ R D ++L Q + D+Y+++
Sbjct: 61 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPD-LVISLYQKMERKQIRCDIYSFNI 119
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
LIK + + + + + + P+ VT +L G + + M E+
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFET- 178
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
TC+P+V T T+++ +G++ ++ G+ P T+ ++ KK
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK---GDT 235
Query: 341 SSVMEYMRKLQ----FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
S + +RK++ Y+ +I++ G + F +M +G+ D T+
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
+I G+ ++G + ++ + +I+ +V YNA+I+A +K E E +Y M +
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 457 CRPDSETFSIMTEAYAKE 474
P++ T+S M + + K+
Sbjct: 356 IIPNTITYSSMIDGFCKQ 373
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 126 QALQVFEMLKE--------QPF--YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
AL++F+++++ PF +P TY L+ L G+ A +++ EM GI
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
P Y++++ C+ S +DEA + M + + P+V T++TLI A R +
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGS-KSFSPNVVTFTTLINGYCKAGRVDDGL 601
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
L+ +M R + N +T ++ G+ K G + + M+ S PD T+ +L+
Sbjct: 602 ELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV-YPDTITIRNMLTG 660
Query: 296 FANKGQVDMMERWYEKFR 313
+K ++ EK +
Sbjct: 661 LWSKEELKRAVAMLEKLQ 678
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 92/221 (41%), Gaps = 15/221 (6%)
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
+E + D+++ N ++ F + ++ + K G+ P+ TF L+ +
Sbjct: 105 MERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVE-- 162
Query: 337 YDKMSSVMEYMRKLQFPWTSS----TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
D++S + ++ F T T+ ++ G ++M +G++
Sbjct: 163 -DRVSEALNLFHQM-FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI 220
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQ----IAENVSFYNAVISACIKADDLMEMERV 448
T+ +++G G +S++ L K++ I NV Y+A+I + K + + +
Sbjct: 221 TYGTIVDGMCKKG---DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ M+EK PD T++ M + G L QE L+
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 169/363 (46%), Gaps = 28/363 (7%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W A Q+ + E+ P T+ L+ K G+ A +++ EM+ I PT Y
Sbjct: 130 KWSDAEQLLRDMIERNI-DPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITY 188
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMR-----------F 231
++++ +C++S +++A + M + C PD+ T +TLI C A R
Sbjct: 189 SSMIDGFCKHSRLEDAKHMFDLMVS-KGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNV 247
Query: 232 ELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS--GMLESATCKPDVWTM 289
+ + L+Q+M V+P+ VT N +L G + G ++E+ L + + + D T
Sbjct: 248 NVAQDLFQEMISNGVSPDIVTCNTLLAGLCENG---KLEKALEMFKVFQKSKMDLDTATC 304
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV-MEYMR 348
N I++ +VD + G++ + T+NILIG + K+ + + + +E +
Sbjct: 305 NIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLC 364
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
K P T TYN++++ F + + M +EG D TF LI GY AG
Sbjct: 365 KGIIPSTV-TYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAG--- 420
Query: 409 KVISSVRLASKL----QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
+V + L S++ +A+ ++ YNA+I K DL + +++ M PD+ TF
Sbjct: 421 RVDDGLELFSEMCQRGLVADTIT-YNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITF 479
Query: 465 SIM 467
M
Sbjct: 480 RSM 482
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 162/382 (42%), Gaps = 17/382 (4%)
Query: 128 LQVFEMLKEQPFYQPKEGT--YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+ ML++ Q K Y ++ L K G A+ +F EM E+GI P Y +
Sbjct: 62 VSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCM 121
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ YC +A L M N PDV T+S LI A V + E LY++M R+
Sbjct: 122 IDGYCSYGKWSDAEQLLRDMIE-RNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV---------- 295
+ P T+T + ++ G+ K + + + M+ S C PD+ T+NT++
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMV-SKGCSPDIITLNTLIDGCCRAKRHLIH 239
Query: 296 -FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 354
F G V++ + +++ + G+ P+ T N L+ + +K + + +K +
Sbjct: 240 GFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDL 299
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS- 413
++T N +I F + G++ D T+ LI + G F +
Sbjct: 300 DTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIY 359
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ + K I V+ YN+++ K + L E ++ M + C PD TFS + + Y K
Sbjct: 360 LEMLCKGIIPSTVT-YNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCK 418
Query: 474 EGMNDKVYALEQEKLQMLLEAS 495
G D L E Q L A
Sbjct: 419 AGRVDDGLELFSEMCQRGLVAD 440
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 147/342 (42%), Gaps = 47/342 (13%)
Query: 170 MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM 229
MVE G +T L+ CR + +A +++M + QPD TY T++
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGH-QPDAVTYGTIVNGMCKLG 59
Query: 230 RFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM 289
+ + MDE + N V + ++ K G + + + + M E P+V T
Sbjct: 60 DTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGI-FPNVLTY 118
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY-------GKKRMYDKMSS 342
N ++ + + G+ E+ IDP+ TF+ LI A+ G + +Y +M
Sbjct: 119 NCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREM-- 176
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAF---SDMGDAKHMEYTFEQMHAEGMKADTKTF----- 394
+R+ FP T+ TY+++I+ F S + DAKHM F+ M ++G D T
Sbjct: 177 ----LRRNIFP-TTITYSSMIDGFCKHSRLEDAKHM---FDLMVSKGCSPDIITLNTLID 228
Query: 395 -CC-----LINGYANAG-------LFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
CC LI+G+ G LF ++IS+ ++ ++ N +++ +
Sbjct: 229 GCCRAKRHLIHGFCQVGNVNVAQDLFQEMISN-------GVSPDIVTCNTLLAGLCENGK 281
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
L + ++K ++ D+ T +I+ K D+ + L
Sbjct: 282 LEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDL 323
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 103/261 (39%), Gaps = 70/261 (26%)
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF------------------ 199
G +A+ +F EM+ G+ P LLA C N +++A
Sbjct: 245 GNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATC 304
Query: 200 -VTLNQM-------------KTLP--NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
+ +N M +LP + DV TY+ LI V F E +Y +M
Sbjct: 305 NIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLC 364
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+ + P+TVT N ++ G+ K ++ +++ M+ S C PDV T +T++ + G+VD
Sbjct: 365 KGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMV-SEGCSPDVVTFSTLIKGYCKAGRVD 423
Query: 304 --------MMERW---------------------------YEKFRNFGIDPETRTFNILI 328
M +R +E+ + G+ P+T TF ++
Sbjct: 424 DGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSML 483
Query: 329 GAYGKKRMYDKMSSVMEYMRK 349
K K +++E ++K
Sbjct: 484 AGLCTKAELQKGLTMLEDLQK 504
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 63/161 (39%), Gaps = 37/161 (22%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY ++ K + E AR++ + MV EG P ++ L+ YC+ +D+
Sbjct: 369 PSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGL-- 426
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L+ +M +R + +T+T N ++ G+
Sbjct: 427 ----------------------------------ELFSEMCQRGLVADTITYNALIHGFC 452
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
K G + + + M+ S C PD T ++L+ K ++
Sbjct: 453 KVGDLNGAQDIFEEMVSSGVC-PDTITFRSMLAGLCTKAEL 492
>gi|15221377|ref|NP_177613.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207514|sp|Q9SSF9.1|PP123_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74750
gi|5882748|gb|AAD55301.1|AC008263_32 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332197508|gb|AEE35629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 855
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 152/332 (45%), Gaps = 4/332 (1%)
Query: 116 SDHVLKK--QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE 173
++ VLK+ + AL F LK QP ++ TY ++ LG++ Q K+ +EMV +
Sbjct: 329 ANQVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRD 388
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
G +P Y L+ +Y R + + EA NQM+ C+PD TY TLI A ++
Sbjct: 389 GCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQE-AGCEPDRVTYCTLIDIHAKAGFLDI 447
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
+YQ M E ++P+T T ++++ GKAG R+ M+ C P++ T N ++
Sbjct: 448 AMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQG-CTPNLVTFNIMI 506
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
++ A + + Y +N G P+ T++I++ G ++ V M++ +
Sbjct: 507 ALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV 566
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
Y +++ + G+ ++ M G++ + T L++ + + +
Sbjct: 567 PDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNL 626
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEM 445
++ L + ++ Y ++S C A +M
Sbjct: 627 LQSMLALGLHPSLQTYTLLLSCCTDARSNFDM 658
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 133/320 (41%), Gaps = 5/320 (1%)
Query: 72 EYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWF--QALQ 129
++ G + T++ G + + K L+ + NTV H + + +A+
Sbjct: 356 KHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMN 415
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
VF ++E +P TY L+ + K+G ++A ++ M E G+ P Y+ ++
Sbjct: 416 VFNQMQEAGC-EPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCL 474
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
+ + A +M C P++ T++ +I A +E LY+DM P+
Sbjct: 475 GKAGHLPAAHRLFCEM-VGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
VT +IV+ G G ++ E V + M + PD ++ ++ G VD +WY
Sbjct: 534 KVTYSIVMEVLGHCGFLEEAEGVFAEM-QRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWY 592
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
+ G+ P T N L+ + + + ++++ M L + TY ++ +D
Sbjct: 593 QAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDA 652
Query: 370 GDAKHMEYTFEQMHAEGMKA 389
M + + M G A
Sbjct: 653 RSNFDMGFCGQLMAVSGHPA 672
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 2/189 (1%)
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
D + N +L N W + R G + T+ ++G G+ + + +++ ++
Sbjct: 325 DAYQANQVLKQMDNYANALGFFYWLK--RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLL 382
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
+ M + + TYN +I ++ K F QM G + D T+C LI+ +A A
Sbjct: 383 DEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKA 442
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
G + + + ++ + Y+ +I+ KA L R++ M + C P+ TF
Sbjct: 443 GFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTF 502
Query: 465 SIMTEAYAK 473
+IM +AK
Sbjct: 503 NIMIALHAK 511
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 97/242 (40%), Gaps = 1/242 (0%)
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
T ++G G+A F ++ ++L M+ CKP+ T N ++ + + + +
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDG-CKPNTVTYNRLIHSYGRANYLKEAMNVFNQ 419
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
+ G +P+ T+ LI + K D + + M++ + TY+ +I G
Sbjct: 420 MQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGH 479
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNA 431
F +M +G + TF +I +A A + + R + Y+
Sbjct: 480 LPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSI 539
Query: 432 VISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQML 491
V+ L E E V+ M+ K+ PD + ++ + + K G DK + Q LQ
Sbjct: 540 VMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAG 599
Query: 492 LE 493
L
Sbjct: 600 LR 601
>gi|168000162|ref|XP_001752785.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695948|gb|EDQ82289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 161/354 (45%), Gaps = 8/354 (2%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W L+V LK+Q ++ + ++ GK GQP +A F EM E G+EP +
Sbjct: 86 KWTMVLEVLLWLKQQDWWNFGIHDFNLMIAAYGKLGQPGIAELSFTEMREVGLEPNVACF 145
Query: 183 TALLAAYCR-NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
T+LL A+ R + + + +KT P P TY I A A RF E +++ +
Sbjct: 146 TSLLEAHARTGNFVRAESIYQEMLKTGP--APTEVTYQVYINALCKAERFNDAERIFKCL 203
Query: 242 DERS-VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
DE + P+ N++L YGKAG F + + + M + A V T N++++
Sbjct: 204 DESAEAKPDARLYNLMLHTYGKAGKFSEQQALFRQM-KGAGVPMTVVTFNSLMAFQKTVA 262
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+ R + + I P+ T+ LI AY K R ++ V M + YN
Sbjct: 263 DAEACLRHMQAAK---IKPDVITYTGLINAYSKARRVEEAHVVFREMVASGLRPSRIAYN 319
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+++A++ + + E F+ M + + D +++ L+ YAN G K ++ +
Sbjct: 320 TLLDAYAKCKEVEGAESLFKSMGQDRCRPDIRSYTTLLAAYANTGNMKKAERLLKRMKQA 379
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
+ NV Y ++ D+ M + ++ +++ +P+S F+++ + ++
Sbjct: 380 GLEPNVVTYGTLMQGYTSVHDINAMLQTFEDLQKAGIKPNSTIFTLLVRTFGQQ 433
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 133/298 (44%), Gaps = 16/298 (5%)
Query: 105 KAWVNTV--AETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPEL 162
+ ++N + AE F+D A ++F+ L E +P Y +L GK+G+
Sbjct: 181 QVYINALCKAERFND---------AERIFKCLDESAEAKPDARLYNLMLHTYGKAGKFSE 231
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
+ +F +M G+ T + +L+A + +A L M+ +PDV TY+ LI
Sbjct: 232 QQALFRQMKGAGVPMTVVTFNSLMAF---QKTVADAEACLRHMQA-AKIKPDVITYTGLI 287
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
A A R E ++++M + P+ + N +L Y K + E + M + C
Sbjct: 288 NAYSKARRVEEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQD-RC 346
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
+PD+ + T+L+ +AN G + ER ++ + G++P T+ L+ Y + M
Sbjct: 347 RPDIRSYTTLLAAYANTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQGYTSVHDINAMLQ 406
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
E ++K S+ + ++ F D + F++M G AD ++ L++
Sbjct: 407 TFEDLQKAGIKPNSTIFTLLVRTFGQQEDFESALSWFKKMLDSGCPADQRSRAALMDA 464
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 11/213 (5%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA-- 198
+P TY L+ K+ + E A VF EMV G+ P+ Y LL AY + ++ A
Sbjct: 277 KPDVITYTGLINAYSKARRVEEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAES 336
Query: 199 -FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVL 257
F ++ Q + C+PD+ +Y+TL+ A + + E L + M + + PN VT ++
Sbjct: 337 LFKSMGQDR----CRPDIRSYTTLLAAYANTGNMKKAERLLKRMKQAGLEPNVVTYGTLM 392
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
GY + M + L+ A KP+ ++ F + + W++K + G
Sbjct: 393 QGYTSVHDINAMLQTFED-LQKAGIKPNSTIFTLLVRTFGQQEDFESALSWFKKMLDSGC 451
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
+ R+ L+ A + ++ V+EY L
Sbjct: 452 PADQRSRAALMDAC---QTSEQKQEVLEYFGSL 481
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 167/377 (44%), Gaps = 3/377 (0%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
L+ Q +AL +F+ + + F QP Y L+ L K+G A ++ M + +P
Sbjct: 156 LEGQIGEALHLFDKMIWEGF-QPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDV 214
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+Y L+ + C++ +AF ++M T P++ T ++L+ A + ++ + TL
Sbjct: 215 VVYGTLIHSLCKDRQQTQAFNLFSEMIT-KGISPNIVTCNSLVYALCNLGEWKHVNTLLN 273
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
+M + + PN ++ V+ K GM Q V+ M +S +PDV T ++ +
Sbjct: 274 EMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGV-EPDVVTYTALIDGHCLR 332
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
++D + ++ + G P ++N LI Y K DK + E M + + + TY
Sbjct: 333 SEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTY 392
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
N +I +G + F +M A G D T+ L++ K ++ ++
Sbjct: 393 NTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEG 452
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ ++ Y VI +A +L + ++ + K +P+ T++IMT K G+ D+
Sbjct: 453 SNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDE 512
Query: 480 VYALEQEKLQMLLEASG 496
L E + A G
Sbjct: 513 ATKLFMEMDENACSADG 529
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 115/287 (40%), Gaps = 35/287 (12%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L K G A V + M + G+EP YTAL+ +C S +DEA V + M C P
Sbjct: 294 LCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEA-VKVFDMMVHKGCAP 352
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------MF 266
+V++Y+TLI R + L+++M + + PNTVT N ++ G G +F
Sbjct: 353 NVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALF 412
Query: 267 DQME-----------RVLSGML----------------ESATCKPDVWTMNTILSVFANK 299
+M R+L L E + PD+ ++
Sbjct: 413 REMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRA 472
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G+++ + + G+ P T+NI+ K+ + D+ + + M + TY
Sbjct: 473 GELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTY 532
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
N + + F + E+M A G D T L+ ++ GL
Sbjct: 533 NTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGL 579
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 113/290 (38%), Gaps = 6/290 (2%)
Query: 108 VNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
V T H L+ + +A++VF+M+ + P +Y L+ K + + A +F
Sbjct: 319 VVTYTALIDGHCLRSEMDEAVKVFDMMVHKG-CAPNVFSYNTLINGYCKIERMDKAMYLF 377
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
EM + + P Y L+ C + +A +M PD+ TY L+
Sbjct: 378 EEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQI-PDLVTYRILLDYLCK 436
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
+ L + ++ ++ P+ IV+ G +AG + + S L S KP+VW
Sbjct: 437 NCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSN-LSSKGLKPNVW 495
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T N + +G +D + + + + T+N + + + + ++E M
Sbjct: 496 TYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEM 555
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM--HAEGMKADTKTFC 395
F ST ++ SD G + + E M H DT FC
Sbjct: 556 LARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDMFPHLRIQVKDT-VFC 604
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/360 (17%), Positives = 140/360 (38%), Gaps = 43/360 (11%)
Query: 174 GIEPTPELYTALL-----AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
G+ P + +LL + Y + +D+A + N+M + + P + ++ ++ +
Sbjct: 29 GMLSIPSPFLSLLHNRFRSKYLHFNTLDDALSSFNRMLHM-HPPPSIVDFAKILTSITKV 87
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
R+ + +L + MD + N T N+++ + + VL+ +L+ C+PD +
Sbjct: 88 KRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLG-CQPDTAS 146
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA------------------ 330
T++ +GQ+ ++K G P+ + LI
Sbjct: 147 FTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSME 206
Query: 331 ----------YG-------KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
YG K R + ++ M T N+++ A ++G+ K
Sbjct: 207 KGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWK 266
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
H+ +M + + + +++ G+ + V + + + +V Y A+I
Sbjct: 267 HVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALI 326
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK-EGMNDKVYALEQEKLQMLL 492
++ E +V+ M K C P+ +++ + Y K E M+ +Y E+ Q L+
Sbjct: 327 DGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLI 386
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 152/359 (42%), Gaps = 36/359 (10%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL L K+G+ A V+ +M+ GI P + + ++ A+C++ +DEA + +M+ L
Sbjct: 163 LLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENL- 221
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+P++ TY +LI V E + + + M E+ V+ N VT +++ GY K D+
Sbjct: 222 GVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEA 281
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
E+VL GM E A PD ++ + G++D R ++ G+ N LI
Sbjct: 282 EKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLIN 341
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
Y K+ + V+ M S +YN +++ + G ++M EG++
Sbjct: 342 GYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEP 401
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIA-ENVSF-------------------- 428
T+ L+ G G F + L K +A + V +
Sbjct: 402 TVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLW 461
Query: 429 --------------YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+N +IS K ++E E ++ +MK+ C PD T+ + + Y K
Sbjct: 462 KDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 520
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 175/447 (39%), Gaps = 46/447 (10%)
Query: 81 IPGYRSKRTPIKNLKKKLERKAKAKAW-----VNTVAETFSDHVLKKQWFQALQV----- 130
IP RS + + NL K E + V V + F ++ + + +V
Sbjct: 154 IPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAG 213
Query: 131 FEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYC 190
F E +P TY L+ G E A+ V M E+G+ YT L+ YC
Sbjct: 214 FVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYC 273
Query: 191 RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT 250
+ +DEA L M+ PD Y LI + + L +M + N
Sbjct: 274 KQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNL 333
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYE 310
N ++ GY K G + E V++ M++ KPD ++ NT+L + +G +
Sbjct: 334 FICNSLINGYCKRGEIHEAEGVITRMVD-WNLKPDSYSYNTLLDGYCREGHTSEAFNLCD 392
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKM-------------------SSVMEYMRKLQ 351
K GI+P T+N L+ + +D S++++ + K++
Sbjct: 393 KMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKME 452
Query: 352 ----------------FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
F + T+N +I MG E F++M G D T+
Sbjct: 453 NFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYR 512
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
LI+GY A + + I+ ++ YN++IS K+ L+E+ + M +
Sbjct: 513 TLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIR 572
Query: 456 HCRPDSETFSIMTEAYAKEGMNDKVYA 482
P+ T+ + + + KEGM DK ++
Sbjct: 573 GLTPNIVTYGALIDGWCKEGMLDKAFS 599
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 148/381 (38%), Gaps = 34/381 (8%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P +Y LL + G A + ++M++EGIEPT Y LL CR D+A
Sbjct: 365 KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ 424
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ M PD YSTL+ FE TL++D+ R T + +T N ++ G
Sbjct: 425 IWHLMMK-RGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 483
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + E + M + C PD T T++ + V + I P
Sbjct: 484 CKMGKMVEAEEIFDKM-KDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPS 542
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+N LI K R +++ ++ M TY +I+ + G ++
Sbjct: 543 IEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYF 602
Query: 381 QMHAEGMKADTKTFCCLINGYANAG-------LFHKVI-------------SSVRLASKL 420
+M G+ A+ +++G G L K++ S +R A+
Sbjct: 603 EMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQ 662
Query: 421 QIAENVS------------FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+IA+++ YN I+ K + + R + + K PD+ T+ +
Sbjct: 663 KIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLI 722
Query: 469 EAYAKEGMNDKVYALEQEKLQ 489
Y+ G D+ + L E L+
Sbjct: 723 HGYSAAGNVDEAFRLRDEMLR 743
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 179/414 (43%), Gaps = 45/414 (10%)
Query: 98 LERKAKAKAWVNTV-AETFSDHVLKKQWFQ---ALQVFEMLKEQPFYQPKEGTYMKLLVL 153
L R+ A + +N V ++ D VL+ +L F+ + +Q ++P +Y KL+ +
Sbjct: 18 LLRRCNAISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHI 77
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI-DEAFVTLNQMKTLPNCQ 212
L + + R N++V+ L R ++I DE + P
Sbjct: 78 LSRGRMYDETRAYLNQLVD------------LCKFKDRGNVIWDELVGVYREFAFSPT-- 123
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------M 265
+ ++K V+ + ++ +M + P+ + N +L K G +
Sbjct: 124 ----VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYV 179
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+ QM RV G++ PDV+ ++ +++ F G+VD + +K N G++P T++
Sbjct: 180 YQQMIRV--GIV------PDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYH 231
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
LI Y + V+++M + TY +I+ + E M E
Sbjct: 232 SLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEE 291
Query: 386 -GMKADTKTFCCLINGYANAGLFHKVISSVRLAS---KLQIAENVSFYNAVISACIKADD 441
+ D + + LI+GY G K+ +VRL +L + N+ N++I+ K +
Sbjct: 292 AALVPDERAYGVLIDGYCRTG---KIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGE 348
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
+ E E V RM + + +PDS +++ + + Y +EG + + L + LQ +E +
Sbjct: 349 IHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPT 402
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 118/326 (36%), Gaps = 67/326 (20%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
T+ ++ L K G+ A ++F++M + G P Y L+ YC+ S + +AF M
Sbjct: 475 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 534
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVT------------- 252
+ P P + Y++LI + R + L +M R +TPN VT
Sbjct: 535 EREP-ISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGM 593
Query: 253 -----------------QNIVL-----GGYGKAGMFDQMERVLSGMLESA---------- 280
NI++ G + G D+ ++ M++
Sbjct: 594 LDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLK 653
Query: 281 -----------------TCK----PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+CK P+ N ++ G+VD R++ G P
Sbjct: 654 SDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVP 713
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ T+ LI Y D+ + + M + TYN +I + + F
Sbjct: 714 DNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLF 773
Query: 380 EQMHAEGMKADTKTFCCLINGYANAG 405
++H +G+ + T+ LI+GY G
Sbjct: 774 HKLHQKGLFPNVVTYNTLIDGYCKIG 799
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 1/144 (0%)
Query: 137 QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLID 196
+ F P Y + L K+G+ + AR+ F+ + +G P Y L+ Y +D
Sbjct: 673 KTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVD 732
Query: 197 EAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIV 256
EAF ++M P++ TY+ LI + + + L+ + ++ + PN VT N +
Sbjct: 733 EAFRLRDEMLR-RGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTL 791
Query: 257 LGGYGKAGMFDQMERVLSGMLESA 280
+ GY K G D ++ M+E
Sbjct: 792 IDGYCKIGNMDAAFKLKDKMIEEG 815
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 2/146 (1%)
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
P +Y +A C+ +D+A M +L PD +TY TLI A +
Sbjct: 678 PNNIVYNIAIAGLCKTGKVDDA-RRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFR 736
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
L +M R + PN VT N ++ G K+ D+ +R+ + + P+V T NT++ +
Sbjct: 737 LRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGL-FPNVVTYNTLIDGY 795
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETR 322
G +D + +K GI P +
Sbjct: 796 CKIGNMDAAFKLKDKMIEEGISPSIQ 821
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 8/127 (6%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
A + F ML + F P TY L+ +G + A ++ +EM+ G+ P Y AL
Sbjct: 698 DARRFFSMLSLKGFV-PDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNAL 756
Query: 186 LAAYCRNSLIDEA---FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
+ C++ +D A F L+Q PN V TY+TLI + L M
Sbjct: 757 INGLCKSENVDRAQRLFHKLHQKGLFPN----VVTYNTLIDGYCKIGNMDAAFKLKDKMI 812
Query: 243 ERSVTPN 249
E ++P+
Sbjct: 813 EEGISPS 819
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 133/316 (42%), Gaps = 6/316 (1%)
Query: 166 VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKT--LPNCQPDVYTYSTLIK 223
+ M E G P Y+ LL +C + +EA L M +C P+V TY+T+I
Sbjct: 156 LLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVID 215
Query: 224 ACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK 283
A F+ E ++Q M + V PN T N ++ GY G + ++ ++L M + K
Sbjct: 216 GLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKM-SARGLK 274
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
PD +T ++L+ + M + + G+ P+ FNI AY K M DK +
Sbjct: 275 PDCYTYGSLLNYLCALSE---MHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDI 331
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
MR+ Y +I+A +G E F QM EG+ + F L+ G
Sbjct: 332 FNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCT 391
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
+ + V I N F+N +I +ME R+ M+ RPD+ +
Sbjct: 392 VDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFS 451
Query: 464 FSIMTEAYAKEGMNDK 479
++ + Y G D+
Sbjct: 452 YTPLISGYCLAGRTDE 467
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 136/363 (37%), Gaps = 41/363 (11%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W + +Q+ E + + +P TY LL L + + MVE G+ P ++
Sbjct: 257 KWKEVVQMLEKMSARGL-KPDCYTYGSLLNYLCALSE---MHSFLDLMVENGLSPDHHIF 312
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
+AY + +ID+A N+M+ P+V Y LI A R + E + M
Sbjct: 313 NIFFSAYAKCGMIDKAMDIFNKMRQ-HGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMI 371
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
VTPN V N ++ G +++ E ++ ML+ C P+ NT++ N G+V
Sbjct: 372 NEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGIC-PNAVFFNTLICNLCNVGRV 430
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
R + + G+ P+ ++ LI Y
Sbjct: 431 MEGRRLIDLMEHVGVRPDAFSYTPLISGYCLA---------------------------- 462
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
G E F+ M + G+ T+ L++GY +A R + +
Sbjct: 463 -------GRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGV 515
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
V YN ++ + E + +Y M + D T++I+ K D+ +
Sbjct: 516 TPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFK 575
Query: 483 LEQ 485
+ Q
Sbjct: 576 MFQ 578
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 121/314 (38%), Gaps = 2/314 (0%)
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
E A ++ EM+++GI P + L+ C + E ++ M+ + +PD ++Y+
Sbjct: 396 ERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHV-GVRPDAFSYTP 454
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
LI A R + E ++ M ++P VT N +L GY A D + ML
Sbjct: 455 LISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKG 514
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
P V T NTIL + + Y N G + T+NI++ K D+
Sbjct: 515 V-TPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEA 573
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+ + + T+ +I A G + F + A G+ + T+ +
Sbjct: 574 FKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAEN 633
Query: 401 YANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
G + S K A N NA++ + D+ ++ E++ +
Sbjct: 634 LIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVE 693
Query: 461 SETFSIMTEAYAKE 474
+ T S++ + +
Sbjct: 694 ASTTSLLISIFTSD 707
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 91/215 (42%), Gaps = 5/215 (2%)
Query: 134 LKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNS 193
L E +P +Y L+ +G+ + A KVF+ MV G+ PT Y LL YC S
Sbjct: 439 LMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSAS 498
Query: 194 LIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQ 253
ID+A+ +M P V TY+T++ RF + LY +M + T
Sbjct: 499 RIDDAYCLFREMLR-KGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTY 557
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
NI+L G K+ D+ ++ L S + ++ T ++ G+ + +
Sbjct: 558 NIILNGLCKSNCVDEAFKMFQS-LCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIP 616
Query: 314 NFGIDPETRTFNIL---IGAYGKKRMYDKMSSVME 345
G+ P T+ ++ + G +D + S ME
Sbjct: 617 ANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAME 651
>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 876
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 158/340 (46%), Gaps = 14/340 (4%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
N V + DH + AL F LK QP + TY ++ +LG++ Q K+ +
Sbjct: 351 NQVLKQLQDHTV------ALNFFYWLKRQPGFNHDGHTYTTMVGILGRAKQFGAINKLLD 404
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
+MV++G +P Y L+ +Y R + +++A N+M+ + C+PD TY TLI A
Sbjct: 405 QMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQRV-GCEPDRVTYCTLIDIHAKA 463
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
+ +YQ M ++P+T T ++++ GKAG ++ M+E C P++ T
Sbjct: 464 GFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQG-CVPNLVT 522
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
N ++++ A + Y ++ G P+ T++I++ G D+ +V M+
Sbjct: 523 YNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMK 582
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
+ + Y +++ + G+ + ++ M G++ + T L++ + H
Sbjct: 583 RKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLRV---H 639
Query: 409 KVISSVR-LASKLQIAENVSF--YNAVISACIKADDLMEM 445
K+ + L S L++ N S Y ++S C +A +M
Sbjct: 640 KLADAYNLLQSMLELGLNPSLQTYTLLLSCCTEARSPYDM 679
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 109/284 (38%), Gaps = 37/284 (13%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY +L+ G++ A VFNEM G EP Y L+ + + +D A
Sbjct: 412 QPNVVTYNRLIHSYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALE 471
Query: 201 TLNQMKTLPNCQPDVYTYSTLI---------------------KACV------------- 226
+M+ PD +TYS +I + CV
Sbjct: 472 MYQRMQAA-GLSPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQ 530
Query: 227 -DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
A ++ LY+DM P+ VT +IV+ G G D+ E V S M + PD
Sbjct: 531 AKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEM-KRKNWVPD 589
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
++ ++ G V+ +WY+ N G+ P T N L+ A+ + ++++
Sbjct: 590 EPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLADAYNLLQ 649
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
M +L + TY ++ ++ M E M G A
Sbjct: 650 SMLELGLNPSLQTYTLLLSCCTEARSPYDMGIYCELMAVTGHPA 693
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 96/242 (39%), Gaps = 1/242 (0%)
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
T ++G G+A F + ++L M++ C+P+V T N ++ + ++ + +
Sbjct: 382 TYTTMVGILGRAKQFGAINKLLDQMVKDG-CQPNVVTYNRLIHSYGRANYLNDAVDVFNE 440
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
+ G +P+ T+ LI + K D + + M+ + TY+ +I G
Sbjct: 441 MQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGH 500
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNA 431
F +M +G + T+ +I A A + + R + Y+
Sbjct: 501 LAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSI 560
Query: 432 VISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQML 491
V+ L E E V+ MK K+ PD + ++ + + K G +K + Q L
Sbjct: 561 VMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTG 620
Query: 492 LE 493
L
Sbjct: 621 LR 622
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 4/140 (2%)
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
E + L + N V++ D A + Y ++ G D T+ ++ A
Sbjct: 336 EALANLNYSMDPYQANQVLKQLQDHTVALNFFYWLKRQ--PGFNHDGHTYTTMVGILGRA 393
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
F + + K NV YN +I + +A+ L + V+ M+ C PD T+
Sbjct: 394 KQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQRVGCEPDRVTY 453
Query: 465 SIMTEAYAKEGMNDKVYALE 484
+ + +AK G D +ALE
Sbjct: 454 CTLIDIHAKAGFLD--FALE 471
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 173/378 (45%), Gaps = 13/378 (3%)
Query: 118 HVLKK--QWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG 174
H L K + A+QV EM+ + + P T ++ L + + AR++ EM+ G
Sbjct: 157 HGLSKAGRLRDAVQVLQEMVSAR--HVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRG 214
Query: 175 IEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELI 234
+ Y+AL+ C+ +DEA L T PD+ TYST+I A R
Sbjct: 215 MAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDA 274
Query: 235 ETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILS 294
++++M S P +T N ++GGY +AG D+ R+L M++ C PDV T T++S
Sbjct: 275 VDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDD-NCAPDVITYTTLMS 330
Query: 295 VFANKGQVDMMERWYEKFRNFGIDPETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFP 353
F G++D +++ + P+ TF L+ G G+ RM D + + E R+ P
Sbjct: 331 AFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRR-GCP 389
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
T TYN V++ + + E + G +T T+ L+ G AG + +
Sbjct: 390 PTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQY 449
Query: 414 V-RLASKLQ-IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
+ +L S+ +V+ Y ++ A + + + Y+ M ++ P + TF+ + A
Sbjct: 450 LDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFAL 509
Query: 472 AKEGMNDKVYALEQEKLQ 489
K + + L +E ++
Sbjct: 510 CKAHQPQQAHELLEEMIK 527
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 115/293 (39%), Gaps = 40/293 (13%)
Query: 114 TFSDHVLKKQWFQ-ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE 172
T D + K + A+ +FE + P TY L+ ++G + A ++ +MV+
Sbjct: 260 TVIDGLCKAGRLRDAVDIFEEMS----CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVD 315
Query: 173 EGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM---KTLPN------------------- 210
+ P YT L++A+C+ +D+A+ QM K P+
Sbjct: 316 DNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMED 375
Query: 211 ------------CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
C P +YTY+ ++ + + E L D R PNTVT NI++
Sbjct: 376 ALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVA 435
Query: 259 GYGKAGMFDQMERVLSGM-LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
G +AG DQ + L + E C V IL G+ D ++YE+ G
Sbjct: 436 GCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGY 495
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
P TF ++ A K + ++E M K T + V+ A+ G
Sbjct: 496 VPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAG 548
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 130/322 (40%), Gaps = 8/322 (2%)
Query: 166 VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC 225
+ +E+ + G+ P P +LA C A ++M L TY LI
Sbjct: 33 LLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNH--TTYYNLIHPL 90
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
A + L DM R + P T+ N+V+GG +AG V M ++ PD
Sbjct: 91 CKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH--PPD 148
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
T ++ + G++ + ++ + P+ T +++ + D ++E
Sbjct: 149 FLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVE 208
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKH-MEYTFEQMHAEGMKADTKTFCCLINGYANA 404
M + TY+ +++ + ++ G D T+ +I+G A
Sbjct: 209 EMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKA 268
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
G ++ +V + ++ A YN++I +A D+ E R+ +M + +C PD T+
Sbjct: 269 G---RLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITY 325
Query: 465 SIMTEAYAKEGMNDKVYALEQE 486
+ + A+ K G D Y L Q+
Sbjct: 326 TTLMSAFCKMGRLDDAYELFQQ 347
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 95/238 (39%), Gaps = 8/238 (3%)
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW 308
++ T +VL G + + +L + PD +NTIL+ +
Sbjct: 9 DSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMAL 68
Query: 309 YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD 368
++K G T +N LI K R+ D+ ++ M+ + +N VI
Sbjct: 69 FDKMAELGAVNHTTYYN-LIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCR 127
Query: 369 MGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR-LASKLQIAENVS 427
G +H + QM+ + D T+ L++G + AG + ++ + S + +N +
Sbjct: 128 AGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTT 186
Query: 428 FYNAVISACI--KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
V S C+ + DD E+ + M + ++ T+S + + K D+ AL
Sbjct: 187 LTVVVQSLCLGDRVDDAREL---VEEMLHRGMAANAITYSALVDGLCKCERLDEAVAL 241
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
A+Q +E + ++ Y P T+ ++ L K+ QP+ A ++ EM++ G P P A+
Sbjct: 482 DAVQFYEEMIQRG-YVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAV 540
Query: 186 LAAYCRNSLIDEA 198
++AYCR +I +A
Sbjct: 541 VSAYCRAGMIQKA 553
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 161/381 (42%), Gaps = 42/381 (11%)
Query: 133 MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRN 192
++ PF P T+ L+ L G+ A VF++M+ G P+ Y+ LL A C+
Sbjct: 152 LISGMPF-PPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKA 210
Query: 193 SLIDEAFVTLNQMKT--------------------------------LPN--CQPDVYTY 218
S +A V L++M+ LP+ C+PD TY
Sbjct: 211 SGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTY 270
Query: 219 STLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
+ ++K+ + R++ +E L+ +M P+ VT N ++ + G+ D+ +V+ M E
Sbjct: 271 TPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSE 330
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
C PD+ T ++IL + G+VD + +++G P+T + ++ ++
Sbjct: 331 HG-CIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWE 389
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+M M P T+N VI + G EQM G D T+ +I
Sbjct: 390 HAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSII 449
Query: 399 NGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
+G N + ++ L S LQ ++ +N ++ D + E++ M
Sbjct: 450 DGLCNE---RCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHS 506
Query: 456 HCRPDSETFSIMTEAYAKEGM 476
C PD+ TF+ + + ++G+
Sbjct: 507 DCPPDATTFNTVITSLCQKGL 527
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 161/360 (44%), Gaps = 9/360 (2%)
Query: 122 KQWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
++W + ++F EM + P E T+ ++ L + G + A KV + M E G P
Sbjct: 281 ERWKEVEELFAEMASNK--CAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIV 338
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
Y+++L C +D+A L+++K+ C+PD Y+T++K ++E E L +
Sbjct: 339 TYSSILDGLCDVGRVDDAVELLSRLKSY-GCKPDTIAYTTVLKGLCSIEQWEHAEELMAE 397
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M P+ VT N V+ + G+ D+ +V+ M E+ C PD+ T N+I+ N+
Sbjct: 398 MVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENG-CNPDIVTYNSIIDGLCNER 456
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+D +++G P+ TFN L+ ++ +M M P ++T+N
Sbjct: 457 CIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFN 516
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
VI + G T + M G + T+ +++ AG K +++L S +
Sbjct: 517 TVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAG---KTQEALKLLSGM 573
Query: 421 QIAE-NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
++ YN VIS KA + E + + M PD+ T+ + +E D+
Sbjct: 574 TNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDR 633
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 145/349 (41%), Gaps = 6/349 (1%)
Query: 129 QVFEMLKEQPFY--QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+ +L + P + +P TY +L L S + + ++F EM P + ++
Sbjct: 250 EALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIV 309
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+ C+ L+D A ++ M C PD+ TYS+++ D R + L +
Sbjct: 310 TSLCQQGLVDRAIKVVDHMSE-HGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGC 368
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P+T+ VL G ++ E +++ M+ S C PD T NT+++ KG VD
Sbjct: 369 KPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCS-DCPPDEVTFNTVIASLCQKGLVDRAI 427
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ E+ G +P+ T+N +I +R D ++ ++ T+N +++
Sbjct: 428 KVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGL 487
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
+ + E M D TF +I GL + I ++++ ++ N
Sbjct: 488 CSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQ 547
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
S YN V+ A +KA E ++ M PD T++ + K G
Sbjct: 548 STYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAG 594
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 143/340 (42%), Gaps = 15/340 (4%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
L+ L G+ A +VF + G T Y ++ YCR I++A ++ M P
Sbjct: 104 LIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRIEDARRLISGMP-FP 159
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
PD +T++ LI+A R ++ DM R +P+ VT +I+L KA + Q
Sbjct: 160 ---PDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQA 216
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+L M + C+PD+ T N +++ N+G VD + G P+ T+ ++
Sbjct: 217 MVLLDEM-RAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLK 275
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+ + ++ + M + T+N ++ + G + M G
Sbjct: 276 SLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIP 335
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDLMEME 446
D T+ +++G + G +V +V L S+L+ + Y V+ + E
Sbjct: 336 DIVTYSSILDGLCDVG---RVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAE 392
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK-VYALEQ 485
+ M C PD TF+ + + ++G+ D+ + +EQ
Sbjct: 393 ELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQ 432
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 4/203 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ ++ L + G A + M E G P Y ++ A + EA
Sbjct: 510 PDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKL 569
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L+ M N PD+ TY+T+I A + E L + M ++P+T+T + G
Sbjct: 570 LSGMT---NGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGIC 626
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ D+ R+L L+ PD N IL F + D+ + + G P+
Sbjct: 627 REDGTDRAIRMLC-RLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDE 685
Query: 322 RTFNILIGAYGKKRMYDKMSSVM 344
T+ IL+ A + + D+ ++
Sbjct: 686 STYIILLEALAYECLLDEAKQLL 708
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 165/365 (45%), Gaps = 5/365 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
A ++F+ + Q P ++ L+ LL K+G + A K F +M G+ P +YT L
Sbjct: 220 DAERIFDEMPSQGVV-PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTIL 278
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDER 244
+ +CRN ++ EA ++M C DV TY+T++ C + M E E L+ +M ER
Sbjct: 279 IGGFCRNGVMSEALKVRDEMLE-QGCVLDVVTYNTILNGLCKEKMLSEADE-LFTEMTER 336
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
V P+ T ++ GY K G ++ + M++ KPDV T NT++ F +++
Sbjct: 337 GVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQR-NLKPDVVTYNTLIDGFCKGSEMEK 395
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ + + I P ++ ILI Y + + + M + F T T N +++
Sbjct: 396 VNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVK 455
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
+ G+A + M +G+ D T+ LING+ + + V +
Sbjct: 456 GYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLP 515
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
+V YN +++ + + E E + +M E+ PD T++ + + + + + +
Sbjct: 516 DVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVH 575
Query: 485 QEKLQ 489
E LQ
Sbjct: 576 DEMLQ 580
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 156/342 (45%), Gaps = 2/342 (0%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L K+ + E + ++M E+G+ P Y L+ AYCR L++EAF ++ M +P
Sbjct: 107 LCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSG-KGLKP 165
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
V+TY+ +I ++ + + +M + ++P+T T NI+L + ER+
Sbjct: 166 CVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIF 225
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
M S PD+ + + ++ + + G +D +++ +N G+ P+ + ILIG + +
Sbjct: 226 DEM-PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCR 284
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+ + V + M + TYN ++ + F +M G+ D T
Sbjct: 285 NGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYT 344
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
F LINGY+ G +K ++ + + + +V YN +I K ++ ++ ++ M
Sbjct: 345 FTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMI 404
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
+ P+ ++ I+ Y G + + L E ++ EA+
Sbjct: 405 SRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEAT 446
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 160/352 (45%), Gaps = 20/352 (5%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY ++ L K+G+ A+ V +EM++ G+ P Y LL CRN + +A
Sbjct: 164 KPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAER 223
Query: 201 TLNQMKTLPNCQPDVYTYSTLI-----KACVD-AMRFELIETLYQDMDERSVTPNTVTQN 254
++M + PD+ ++S LI C+D A+++ ++DM + P+ V
Sbjct: 224 IFDEMPS-QGVVPDLVSFSALIGLLSKNGCLDQALKY------FRDMKNAGLAPDNVIYT 276
Query: 255 IVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRN 314
I++GG+ + G+ + +V MLE C DV T NTIL+ + + + + +
Sbjct: 277 ILIGGFCRNGVMSEALKVRDEMLEQG-CVLDVVTYNTILNGLCKEKMLSEADELFTEMTE 335
Query: 315 FGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKH 374
G+ P+ TF LI Y K +K ++ E M + TYN +I+ F + +
Sbjct: 336 RGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEK 395
Query: 375 MEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL---QIAENVSFYNA 431
+ + M + + + ++ LINGY N G V + RL ++ + N
Sbjct: 396 VNELWNDMISRRIYPNHISYGILINGYCNMGC---VSEAFRLWDEMVEKGFEATIITCNT 452
Query: 432 VISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
++ +A + ++ + M K PD T++ + + KE D+ +AL
Sbjct: 453 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFAL 504
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 115/281 (40%), Gaps = 35/281 (12%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY +L L K A ++F EM E G+ P +T L+ Y ++ +++A VTL +M
Sbjct: 309 TYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKA-VTLFEM 367
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
N +PDV TY+TLI E + L+ DM R + PN ++ I++ GY G
Sbjct: 368 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 427
Query: 266 FDQMERVLSGMLESA------TCK----------------------------PDVWTMNT 291
+ R+ M+E TC PD T NT
Sbjct: 428 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 487
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
+++ F + +D K N G+ P+ T+N+++ + ++ + +M M +
Sbjct: 488 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 547
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
STY ++I + K ++M G D K
Sbjct: 548 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 588
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 122/298 (40%), Gaps = 2/298 (0%)
Query: 179 PELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
P ++ L+ Y + + E +K+ C + ++L+ V +L +Y
Sbjct: 27 PLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVS-INACNSLLGGLVKVGWVDLAWEIY 85
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
Q++ V N T NI++ K + + LS M E PDV T NT+++ +
Sbjct: 86 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGV-FPDVVTYNTLINAYCR 144
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
+G ++ + G+ P T+N +I K Y + V++ M K+ ++T
Sbjct: 145 QGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTAT 204
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN ++ + E F++M ++G+ D +F LI + G + + R
Sbjct: 205 YNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMK 264
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+A + Y +I + + E +V M E+ C D T++ + KE M
Sbjct: 265 NAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 322
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 158/343 (46%), Gaps = 3/343 (0%)
Query: 144 EGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLN 203
E TY LL L + G+ E A +V ++VE G+ P+ Y L+ AYC+ + +A +T
Sbjct: 325 ERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTE 384
Query: 204 QMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKA 263
QM+ +P+ T++T+I + + ET + M E+ V+P T N ++ GYG+
Sbjct: 385 QMEE-RGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQK 443
Query: 264 GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
G F + L M + A KP+V + ++++ ++ E G+ P
Sbjct: 444 GHFVRCFEFLDEM-DKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEI 502
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
+N+LI A + M + T TYN +I G K E F QM
Sbjct: 503 YNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMA 562
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
+G D T+ LI+GYA + K + L I V ++ +I AC + + ++
Sbjct: 563 GKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYAC-RKEGVV 621
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
M+++++ M + PD ++ M +YA++G K +L Q+
Sbjct: 622 TMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQ 664
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 149/345 (43%), Gaps = 17/345 (4%)
Query: 131 FEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAA 188
FE++K + P Y +L L K + + ARK+F+EM++ + P Y L+
Sbjct: 177 FELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDG 236
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP 248
YC+ I+EA +MK N + ++ TY++L+ + R + + +M+ P
Sbjct: 237 YCKVGGIEEALGFKERMKE-QNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLP 295
Query: 249 NTVTQNIV---LGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ G G G+FD E + D T +L+ G+++
Sbjct: 296 GGFLSFVFDDHSNGAGDDGLFDGKE-----------IRIDERTYCILLNGLCRVGRIEKA 344
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E K G+ P ++NIL+ AY ++ K E M + T+N VI
Sbjct: 345 EEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISK 404
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
F + G+ H E +M +G+ +T+ LINGY G F + + K I N
Sbjct: 405 FCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPN 464
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
V Y ++I+ K L++ E V M + P++E ++++ EA
Sbjct: 465 VISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEA 509
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 115/253 (45%), Gaps = 5/253 (1%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A + F+EM++ GI+ T Y L+ RN + +A QM C PDV TY++LI
Sbjct: 519 AFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAG-KGCNPDVITYNSLI 577
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
++ + LY M + P T + ++ K G+ M+++ ML+
Sbjct: 578 SGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVV-TMDKMFQEMLQMDLV 636
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
PD + N ++ +A G V +++ + G+D + T+N LI AY + R ++
Sbjct: 637 -PDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKH 695
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+++ M+ TYN +I+ D+ D + + +M G+ + LI+G
Sbjct: 696 LVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLR 755
Query: 403 NAGLFH--KVISS 413
G+ +++SS
Sbjct: 756 EEGMLREAQIVSS 768
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 137/317 (43%), Gaps = 19/317 (5%)
Query: 128 LQVFEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
++ FE L E + +P +Y L+ L K + A V +M+ G+ P E+Y L
Sbjct: 447 VRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNML 506
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A C S + +AF ++M + TY+TLI R + E L+ M +
Sbjct: 507 IEASCSLSKLKDAFRFFDEM-IQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKG 565
Query: 246 VTPNTVTQNIVLGGYGKA-------GMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
P+ +T N ++ GY K+ ++D+M ++L KP V T + ++
Sbjct: 566 CNPDVITYNSLISGYAKSVNTQKCLELYDKM-KILG-------IKPTVGTFHPLIYACRK 617
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
+G V M++ +++ + P+ +N +I +Y + K S+ + M T
Sbjct: 618 EGVV-TMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVT 676
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN++I A+ +++ + M A+G+ T+ LI G + F+ R
Sbjct: 677 YNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMV 736
Query: 419 KLQIAENVSFYNAVISA 435
+ + NVS +IS
Sbjct: 737 ERGLLLNVSMCYQLISG 753
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/404 (19%), Positives = 160/404 (39%), Gaps = 30/404 (7%)
Query: 80 SIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPF 139
S P Y+ + ++ L+ + R T +L K F +L +PF
Sbjct: 34 SDPQYQKRLQKVQKLETLISR-----GRTITARRFLRSLLLTKTAFSSLSELHAHVSKPF 88
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+ LL L S + A +++ M ++G P+ LL + ++
Sbjct: 89 FSDN------LLWLCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTL 142
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACV---DAMR-FELIETLYQDMDERSVTPNTVTQNI 255
+ +PD Y ++A V D + FEL++++ +D + P+ N+
Sbjct: 143 AVFADVID-SGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKD----GMGPSVFAYNL 197
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
VLGG K ++ M++ P+ T NT++ + G ++ + E+ +
Sbjct: 198 VLGGLCKVRRIKDARKLFDEMIQRNMV-PNTVTYNTLIDGYCKVGGIEEALGFKERMKEQ 256
Query: 316 GIDPETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKH 374
++ T+N L+ G G R+ D ++E P ++ F D +
Sbjct: 257 NVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSF-----VFDDHSNGAG 311
Query: 375 MEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVIS 434
+ F+ + ++ D +T+C L+NG G K + + + + YN +++
Sbjct: 312 DDGLFD---GKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVN 368
Query: 435 ACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
A + D+ + ++M+E+ P+ TF+ + + + G D
Sbjct: 369 AYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVD 412
>gi|3258568|gb|AAC24378.1| Unknown protein [Arabidopsis thaliana]
Length = 691
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 170/384 (44%), Gaps = 28/384 (7%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE-GIEPTPELYTA 184
+++++F+ +K+ P T+ LL +L K G+ +A +F+EM G+ P +
Sbjct: 156 ESVKLFQTMKQMGI-SPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNT 214
Query: 185 LLAAYCRNSLIDEAFVTLNQM-----------------KTLPNCQPDVYTYSTLIKACVD 227
L+ +C+NS++DEAF M K + P+V +Y+TL++
Sbjct: 215 LINGFCKNSMVDEAFRIFKDMELAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCM 274
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES-ATCKPDV 286
+ ++ DM R + PN VT N ++ G +A +D+++ +L G ++ T PD
Sbjct: 275 KQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDA 334
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME- 345
T N ++ + G +D + +++ N + P++ ++++LI + +D+ ++
Sbjct: 335 CTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNE 394
Query: 346 ------YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+ K + ++ YN + E G K E F Q+ G++ D ++ LI
Sbjct: 395 LFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLIT 453
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
G+ G F + L + + ++ Y +I +K + + +RM P
Sbjct: 454 GHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLP 513
Query: 460 DSETFSIMTEAYAKEGMNDKVYAL 483
+ TF + AK ++ + L
Sbjct: 514 VATTFHSVLAELAKRKFANESFCL 537
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 100/258 (38%), Gaps = 53/258 (20%)
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
N ++ YG AG+F + ++ M + P V T N++LS+ +G+ M +++ R
Sbjct: 142 NSLIRSYGNAGLFQESVKLFQTMKQMGI-SPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 314 -NFGIDPETRTFNILIGAYGKKRMYDKMSSV---MEYMRKLQFPWTS------------- 356
+G+ P++ TFN LI + K M D+ + ME K++
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELAGKVKIAHNVLSGMLKKATDVHP 260
Query: 357 --STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
+Y ++ + + F M + G+K + T+ LI G + A + ++
Sbjct: 261 NVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEI---- 316
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
+ I N +F PD+ TF+I+ +A+
Sbjct: 317 ---KDILIGGNDAFTTFA--------------------------PDACTFNILIKAHCDA 347
Query: 475 GMNDKVYALEQEKLQMLL 492
G D + QE L M L
Sbjct: 348 GHLDAAMKVFQEMLNMKL 365
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 128/323 (39%), Gaps = 49/323 (15%)
Query: 157 SGQPELARKVFNEMVEEGIEPTPEL--YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
+G+ ++A V + M+++ + P + YT L+ YC IDEA + + M + +P+
Sbjct: 238 AGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLS-RGLKPN 296
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVT--PNTVTQNIVLGGYGKAGMFDQMERV 272
TY+TLIK +A R++ I+ + ++ T P+ T NI++ + AG D +V
Sbjct: 297 AVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKV 356
Query: 273 LSGML------ESAT-----------------------------------CKPDVWTMNT 291
ML +SA+ CKP N
Sbjct: 357 FQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNP 416
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGI-DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
+ G+ E+ + + G+ DP + + LI + ++ + ++ M +
Sbjct: 417 MFEYLCANGKTKQAEKVFRQLMKRGVQDPPS--YKTLITGHCREGKFKPAYELLVLMLRR 474
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
+F TY +I+ +G+A T ++M TF ++ A ++
Sbjct: 475 EFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANES 534
Query: 411 ISSVRLASKLQIAENVSFYNAVI 433
V L + +I +N+ V+
Sbjct: 535 FCLVTLMLEKRIRQNIDLSTQVV 557
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 115/280 (41%), Gaps = 37/280 (13%)
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG---GYGKAGM----FDQME 270
+++LI++ +A F+ L+Q M + ++P+ +T N +L G+ GM FD+M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETR-TFNILIG 329
R + PD +T NT+++ F VD + F++ + + + N+L G
Sbjct: 201 R-------TYGVTPDSYTFNTLINGFCKNSMVD---EAFRIFKDMELAGKVKIAHNVLSG 250
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
K+ D +V+ +Y ++ + + F M + G+K
Sbjct: 251 ML--KKATDVHPNVV-------------SYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKP 295
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASK---LQIAENVSFYNAVISACIKADDLMEME 446
+ T+ LI G + A + + I + + A + +N +I A A L
Sbjct: 296 NAVTYNTLIKGLSEAHRYDE-IKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAM 354
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+V++ M PDS ++S++ D+ L E
Sbjct: 355 KVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNE 394
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 85/191 (44%), Gaps = 21/191 (10%)
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
E+ N + + R FN LI +YG ++ + + + M+++ + T+N+++
Sbjct: 127 ERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKR 186
Query: 370 GDAKHMEYTFEQMHAE-GMKADTKTFCCLINGYANAGLFH---KVISSVRLASKLQIAEN 425
G F++M G+ D+ TF LING+ + ++ + LA K++IA N
Sbjct: 187 GRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELAGKVKIAHN 246
Query: 426 ----------------VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
VS+ V C+K ++ E V+ M + +P++ T++ + +
Sbjct: 247 VLSGMLKKATDVHPNVVSYTTLVRGYCMK-QEIDEAVLVFHDMLSRGLKPNAVTYNTLIK 305
Query: 470 AYAKEGMNDKV 480
++ D++
Sbjct: 306 GLSEAHRYDEI 316
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 13/123 (10%)
Query: 368 DMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVS 427
++ A++ ++ E+ +K + F LI Y NAGLF + + + ++ I+ +V
Sbjct: 115 NLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVL 174
Query: 428 FYNAVISACIK------ADDLM-EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+N+++S +K A DL EM R Y PDS TF+ + + K M D+
Sbjct: 175 TFNSLLSILLKRGRTGMAHDLFDEMRRTYG------VTPDSYTFNTLINGFCKNSMVDEA 228
Query: 481 YAL 483
+ +
Sbjct: 229 FRI 231
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 2/138 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P Y + L +G+ + A KVF ++++ G++ P Y L+ +CR A+
Sbjct: 408 KPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPS-YKTLITGHCREGKFKPAYE 466
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L M PD+ TY LI + L Q M S P T + VL
Sbjct: 467 LLVLMLR-REFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAEL 525
Query: 261 GKAGMFDQMERVLSGMLE 278
K ++ +++ MLE
Sbjct: 526 AKRKFANESFCLVTLMLE 543
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 171/382 (44%), Gaps = 9/382 (2%)
Query: 109 NTVAETFS----DHVLKK--QWFQALQVFEMLKEQPFYQPKEG-TYMKLLVLLGKSGQPE 161
N ++TF+ H L K Q +A+++F ++E+ P + TY ++ GQ E
Sbjct: 146 NVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVE 205
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
+ +F+ MV EG++P Y +LL AY + EA N +K +PD+ +Y++L
Sbjct: 206 NCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKK-NGLRPDIVSYTSL 264
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
+ A + + E ++ M + S PN V+ N ++ YG AGM + +L M E
Sbjct: 265 LNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEM-EKDG 323
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
+PDV +++T+L+ Q+ +E E R+ GID T +N I +Y Y+K
Sbjct: 324 IQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKAL 383
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+ MR+ + TYN +I S +G FE M + + + + LI Y
Sbjct: 384 ELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSY 443
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
G + S+ K +V Y +I A ++K M+ PD+
Sbjct: 444 IKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDA 503
Query: 462 ETFSIMTEAYAKEGMNDKVYAL 483
S + EA+ K G ++V L
Sbjct: 504 IICSSLMEAFNKGGEPERVLQL 525
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 155/334 (46%), Gaps = 15/334 (4%)
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
++Y ++ Y R++ +D+A +M+ C+PD Y++LI A A ++ + +
Sbjct: 12 DIYGMMIRLYARHNQVDQARGLFFEMQEW-RCKPDADIYNSLIHAHSRAGQWRWAINIME 70
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
DM ++ P T N V+ G AG + + + M E+ PD+ T N +LS N
Sbjct: 71 DMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGV-GPDLVTHNIVLSALKNG 129
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM--RKLQFPWTSS 357
Q ++E + + +T T NI+I K + + M R+ + P
Sbjct: 130 AQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVV 189
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
TY +++ ++ G ++ + F+ M AEG+K + + L+ YA+ G+ + ++ L
Sbjct: 190 TYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLI 249
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
K + ++ Y ++++A ++ + V+ +MK+ C+P+ +++ + +AY GM
Sbjct: 250 KKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGML 309
Query: 478 DKVYAL--EQEK---------LQMLLEASGHWQQ 500
+ L E EK + LL A G +Q
Sbjct: 310 KEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQ 343
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 162/363 (44%), Gaps = 51/363 (14%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F ++K+ +P +Y LL G+S QPE AR+VFN+M + +P Y AL
Sbjct: 241 EALAIFNLIKKNGL-RPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNAL 299
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET--------- 236
+ AY ++ EA L++M+ QPDV + STL+ AC + IET
Sbjct: 300 IDAYGSAGMLKEAVGLLHEMEK-DGIQPDVVSISTLLAACGRCRQITRIETILEAARSRG 358
Query: 237 --------------------------LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
LY M E +V P+ VT NI++ G K G + +
Sbjct: 359 IDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESL 418
Query: 271 RVLSGMLES-ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
R M++S + +V++ +++ + +G++ E + + G P+ T+ LI
Sbjct: 419 RFFEDMVDSKVSSTKEVYS--SLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQ 476
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
AY + + + + M P + ++++EAF+ G+ + + E M + +
Sbjct: 477 AYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSIPL 536
Query: 390 DTKTF------CCLINGYANAG-LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
+ K++ C +I + A + + SS+ S + ++F + C K +++
Sbjct: 537 NQKSYFEIIASCTMIRDWKTASEMIEYLDSSLSSISVGTLNHVLNF----LGKCGKTENM 592
Query: 443 MEM 445
M++
Sbjct: 593 MKL 595
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/379 (20%), Positives = 155/379 (40%), Gaps = 53/379 (13%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P Y L+ ++GQ A + +M+ I PT Y N++I+
Sbjct: 43 KPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTY---------NNVINACGA 93
Query: 201 TLNQMKTLPNCQ--------PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVT 252
N K L C+ PD+ T++ ++ A + ++ + ++ M +VT +T T
Sbjct: 94 AGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFT 153
Query: 253 QNIVLGGYGKAGMFDQMERVLSGMLESAT-CKPDVWTMNTILSVFANKGQVDMMERWYEK 311
NI++ K G + + + M E T C PDV T +I+ + GQV+ + ++
Sbjct: 154 LNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDL 213
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
G+ P +N L+GAY + M+ + ++ ++K +Y +++ A+
Sbjct: 214 MVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQ 273
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNA 431
+ F +M K + ++ LI+ Y +AG+ + + + K I +V +
Sbjct: 274 PEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSIST 333
Query: 432 VISACIKADDLMEMERV-----------------------------------YKRMKEKH 456
+++AC + + +E + Y M+E +
Sbjct: 334 LLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESN 393
Query: 457 CRPDSETFSIMTEAYAKEG 475
+PD+ T++I+ +K G
Sbjct: 394 VKPDAVTYNILISGSSKLG 412
>gi|168052517|ref|XP_001778696.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669911|gb|EDQ56489.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 799
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 171/421 (40%), Gaps = 71/421 (16%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+L+VF +K Q Y+ + Y ++ L + + + AR +F EM +P E Y AL
Sbjct: 69 HSLRVFNWMKNQKCYRARTDIYNCMIWLHARHQRADQARGLFYEMKVWRCKPDVETYNAL 128
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPN-CQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
+ + R A + M P P +Y+ LI AC + ++ + + M +
Sbjct: 129 MNVHGRAGQWRWALQIFDDMLQAPKPIAPSRSSYNNLINACGSSGQWFKALEICKRMTDN 188
Query: 245 SVTPNTVTQNIVLGGY-----------------------------------GKAGMFDQM 269
V P+ +T NI+L + K G F+
Sbjct: 189 GVGPDLMTYNIILSAFKSGGQPRHAVAYYDHLISKKVPLDRYSHNIILNCLTKLGRFEDA 248
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+ M + C+PDV T N +L V+A GQ+ + ++ G+ P TFN L+G
Sbjct: 249 INLFKEMRKMNGCEPDVVTFNALLHVYALCGQITKAQETFDMMIGEGMAPTIVTFNTLLG 308
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
AY + MY + V+ + K +F +Y++++ AF G + + F+ M K
Sbjct: 309 AYASQGMYTEALQVVGLLVKAKFEPDVVSYSSLLNAFGKAGYPEKAQEVFDLMKQRSRKP 368
Query: 390 DTKTFCCLINGYANAG-------LFH----------------------------KVISSV 414
+ TF L++ YA+AG L H KV
Sbjct: 369 NLVTFNGLMDAYASAGKYERARELLHDMAEARIEPNVVTICSLFAACARARCPEKVRDVF 428
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
A QIA NV +NA I+A I+A E + + + M+E++ RP+ TF ++ A
Sbjct: 429 HEAKVRQIALNVPAFNAAITAYIEAGQFDEAKALLEVMEEQNLRPNGVTFLLLINAAGSL 488
Query: 475 G 475
G
Sbjct: 489 G 489
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 165/366 (45%), Gaps = 19/366 (5%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A+ +F+ +++ +P T+ LL + GQ A++ F+ M+ EG+ PT + LL
Sbjct: 248 AINLFKEMRKMNGCEPDVVTFNALLHVYALCGQITKAQETFDMMIGEGMAPTIVTFNTLL 307
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
AY + EA + + +PDV +YS+L+ A A E + ++ M +RS
Sbjct: 308 GAYASQGMYTEALQVVGLL-VKAKFEPDVVSYSSLLNAFGKAGYPEKAQEVFDLMKQRSR 366
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PN VT N ++ Y AG +++ +L M E A +P+V TI S+FA +
Sbjct: 367 KPNLVTFNGLMDAYASAGKYERARELLHDMAE-ARIEPNV---VTICSLFAACARA---- 418
Query: 307 RWYEKFRNFGIDPETR-------TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
R EK R+ + + R FN I AY + +D+ +++E M + T+
Sbjct: 419 RCPEKVRDVFHEAKVRQIALNVPAFNAAITAYIEAGQFDEAKALLEVMEEQNLRPNGVTF 478
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+I A +GD + +++M G+ + LIN +A G++++ + K
Sbjct: 479 LLLINAAGSLGDYREARTLYDKMVDLGIPLTVEPCSALINAFAKHGMYNEARTIFDDMRK 538
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
NV Y +++ A DD + + M PDS F + A K ++K
Sbjct: 539 AGCKANVVTYTSLMIAYRMYDD---AQLACEEMVAAGITPDSIAFGTLFVALNKANRSEK 595
Query: 480 VYALEQ 485
V +E+
Sbjct: 596 VLQIEK 601
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 160/366 (43%), Gaps = 6/366 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+ALQV +L + F +P +Y LL GK+G PE A++VF+ M + +P + L
Sbjct: 318 EALQVVGLLVKAKF-EPDVVSYSSLLNAFGKAGYPEKAQEVFDLMKQRSRKPNLVTFNGL 376
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ AY + A L+ M +P+V T +L AC A E + ++ + R
Sbjct: 377 MDAYASAGKYERARELLHDMAE-ARIEPNVVTICSLFAACARARCPEKVRDVFHEAKVRQ 435
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ N N + Y +AG FD+ + +L ++E +P+ T +++ + G
Sbjct: 436 IALNVPAFNAAITAYIEAGQFDEAKALLE-VMEEQNLRPNGVTFLLLINAAGSLGDYREA 494
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
Y+K + GI + LI A+ K MY++ ++ + MRK TY +++ A
Sbjct: 495 RTLYDKMVDLGIPLTVEPCSALINAFAKHGMYNEARTIFDDMRKAGCKANVVTYTSLMIA 554
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ DA + E+M A G+ D+ F L A KV+ + + I +
Sbjct: 555 YRMYDDA---QLACEEMVAAGITPDSIAFGTLFVALNKANRSEKVLQIEKSSRARGILFD 611
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
Y + AC + D +Y+ MK++ R + + A + G D+++ +
Sbjct: 612 DVAYTETLLACSRLKDWETALFLYEGMKKRRLRLTNTMVINLLSAVGRSGKLDRLHKVFL 671
Query: 486 EKLQML 491
E Q +
Sbjct: 672 ELQQQI 677
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/440 (20%), Positives = 160/440 (36%), Gaps = 72/440 (16%)
Query: 103 KAKAWVNTVAETFSDHVLKKQWFQALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSGQPE 161
+ K V T + H QW ALQ+F+ ML+ P +Y L+ G SGQ
Sbjct: 117 RCKPDVETYNALMNVHGRAGQWRWALQIFDDMLQAPKPIAPSRSSYNNLINACGSSGQWF 176
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAY-------------------------------- 189
A ++ M + G+ P Y +L+A+
Sbjct: 177 KALEICKRMTDNGVGPDLMTYNIILSAFKSGGQPRHAVAYYDHLISKKVPLDRYSHNIIL 236
Query: 190 -CRNSL--IDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
C L ++A +M+ + C+PDV T++ L+ + + + M +
Sbjct: 237 NCLTKLGRFEDAINLFKEMRKMNGCEPDVVTFNALLHVYALCGQITKAQETFDMMIGEGM 296
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW------------------- 287
P VT N +LG Y GM+ + +V+ G+L A +PDV
Sbjct: 297 APTIVTFNTLLGAYASQGMYTEALQVV-GLLVKAKFEPDVVSYSSLLNAFGKAGYPEKAQ 355
Query: 288 ----------------TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
T N ++ +A+ G+ + I+P T L A
Sbjct: 356 EVFDLMKQRSRKPNLVTFNGLMDAYASAGKYERARELLHDMAEARIEPNVVTICSLFAAC 415
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
+ R +K+ V + Q +N I A+ + G + E M + ++ +
Sbjct: 416 ARARCPEKVRDVFHEAKVRQIALNVPAFNAAITAYIEAGQFDEAKALLEVMEEQNLRPNG 475
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
TF LIN + G + + + L I V +A+I+A K E ++
Sbjct: 476 VTFLLLINAAGSLGDYREARTLYDKMVDLGIPLTVEPCSALINAFAKHGMYNEARTIFDD 535
Query: 452 MKEKHCRPDSETFSIMTEAY 471
M++ C+ + T++ + AY
Sbjct: 536 MRKAGCKANVVTYTSLMIAY 555
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 147/350 (42%), Gaps = 39/350 (11%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+ AL++ R ++ + N MK + Y+ +I R + L+ +M
Sbjct: 54 FPALISEITRTGALEHSLRVFNWMKNQKCYRARTDIYNCMIWLHARHQRADQARGLFYEM 113
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA--------------------- 280
P+ T N ++ +G+AG + ++ ML++
Sbjct: 114 KVWRCKPDVETYNALMNVHGRAGQWRWALQIFDDMLQAPKPIAPSRSSYNNLINACGSSG 173
Query: 281 -------TCK--------PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
CK PD+ T N ILS F + GQ +Y+ + + + + N
Sbjct: 174 QWFKALEICKRMTDNGVGPDLMTYNIILSAFKSGGQPRHAVAYYDHLISKKVPLDRYSHN 233
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQF--PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
I++ K ++ ++ + MRK+ P T+N ++ ++ G + TF+ M
Sbjct: 234 IILNCLTKLGRFEDAINLFKEMRKMNGCEP-DVVTFNALLHVYALCGQITKAQETFDMMI 292
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
EGM TF L+ YA+ G++ + + V L K + +V Y+++++A KA
Sbjct: 293 GEGMAPTIVTFNTLLGAYASQGMYTEALQVVGLLVKAKFEPDVVSYSSLLNAFGKAGYPE 352
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
+ + V+ MK++ +P+ TF+ + +AYA G ++ L + + +E
Sbjct: 353 KAQEVFDLMKQRSRKPNLVTFNGLMDAYASAGKYERARELLHDMAEARIE 402
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 142/389 (36%), Gaps = 46/389 (11%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P T L ++ PE R VF+E I + A + AY DEA
Sbjct: 402 EPNVVTICSLFAACARARCPEKVRDVFHEAKVRQIALNVPAFNAAITAYIEAGQFDEAKA 461
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L M+ N +P+ T+ LI A + TLY M + + + ++ +
Sbjct: 462 LLEVMEE-QNLRPNGVTFLLLINAAGSLGDYREARTLYDKMVDLGIPLTVEPCSALINAF 520
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K GM+++ + M A CK +V T +++ + D + E+ GI P+
Sbjct: 521 AKHGMYNEARTIFDDM-RKAGCKANVVTYTSLMIAYR---MYDDAQLACEEMVAAGITPD 576
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+ F L A K +K+ + + R + Y + A S + D + + +E
Sbjct: 577 SIAFGTLFVALNKANRSEKVLQIEKSSRARGILFDDVAYTETLLACSRLKDWETALFLYE 636
Query: 381 QMHAEGMKADTKTFCCLINGYANAG---LFHKVISSVRLASKLQIAENVSFYNAVISA-- 435
M ++ L++ +G HKV + L ++ + YN +I +
Sbjct: 637 GMKKRRLRLTNTMVINLLSAVGRSGKLDRLHKVF--LELQQQIGFVPTLQMYNILIDSYS 694
Query: 436 -------------CIKADDL--------------MEME------RVYKRMKEKHCRPDSE 462
CIK D L ++E +Y + + PD
Sbjct: 695 RGLKWRKCLEVLGCIKKDILEPNWKTYEPILSCLSQLELWETYLEIYGEVLAQGMEPDYN 754
Query: 463 TFSIMTEAYAKEGMNDKVYALEQEKLQML 491
I AY GM ++ +L + +LQ L
Sbjct: 755 ILKISVTAYTSLGMEEEA-SLTEARLQGL 782
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 114/456 (25%), Positives = 193/456 (42%), Gaps = 32/456 (7%)
Query: 39 FNLIHCSVTSTNKHTSFSSESAVAAKKRLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKL 98
F L+ C K F+ + + L KEG Y R+KR + L L
Sbjct: 279 FGLVDCMAGKGLKPGLFTYNALING---LCKEGSYE----------RAKRVLDEMLGVGL 325
Query: 99 ERKAKAKAWVNTVAETFSDHVLKKQWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKS 157
A T + K+ ++A +VF EML Q P ++ ++ + ++
Sbjct: 326 CPNAA------TFNPMLVESCRKEDVWEAERVFNEML--QRGVVPDLISFSSIVGVFSRN 377
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
G+ A F +M G+ P +YT L+ YCRN + A N+M C DV T
Sbjct: 378 GELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVE-RGCVMDVVT 436
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y+TL+ + + L+++M ER V P+ T ++ GY K G M + LS +
Sbjct: 437 YNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDG---NMTKALS-LF 492
Query: 278 ESATC---KPDVWTMNTILSVFANKGQVD-MMERWYEKFRNFGIDPETRTFNILIGAYGK 333
E+ T KPDV T NT++ F G+++ E WY+ I P +F+ILI +
Sbjct: 493 ETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISR-EIFPSYISFSILINGFCS 551
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+ + + + M++ T T N +I+ + G+ M +EG+ D T
Sbjct: 552 LGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCIT 611
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+ LIN + F + + + + N+ YNA++ + + E E V +M
Sbjct: 612 YNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMI 671
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+K PD T++ + Y + + + + E LQ
Sbjct: 672 DKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQ 707
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 140/317 (44%), Gaps = 37/317 (11%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY LL L + + A ++F EMVE G+ P T L+ YC++ + +A ++L +
Sbjct: 436 TYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKA-LSLFET 494
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
TL + +PDV TY+TL+ E + L+ DM R + P+ ++ +I++ G+ G+
Sbjct: 495 MTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGL 554
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+ R+ M E KP + T NTI+ + G + + + G+ P+ T+N
Sbjct: 555 VSEAFRLWDEMKEKGI-KPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYN 613
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
LI ++ K+ +D+ ++ M + TYN ++ FS G + E +M +
Sbjct: 614 TLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDK 673
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G+ D T+ LINGY + D++ E
Sbjct: 674 GINPDKSTYTSLINGY-----------------------------------VSKDNMKEA 698
Query: 446 ERVYKRMKEKHCRPDSE 462
RV+ M ++ PD +
Sbjct: 699 FRVHDEMLQRGFVPDDK 715
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 148/336 (44%), Gaps = 8/336 (2%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L K G+ + +EM E+G+ Y L+ AYCR L+ EAF ++ M +P
Sbjct: 234 LCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAG-KGLKP 292
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
++TY+ LI +E + + +M + PN T N +L + + ERV
Sbjct: 293 GLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVF 352
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
+ ML+ PD+ + ++I+ VF+ G++ ++EK + G+ P+T + ILI Y +
Sbjct: 353 NEMLQRGVV-PDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCR 411
Query: 334 KRMYDKMSSVMEY---MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
D +S ++ M + TYN ++ + F++M G+ D
Sbjct: 412 N---DDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPD 468
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
T LI+GY G K +S + + +V YN ++ K ++ + + ++
Sbjct: 469 FYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWY 528
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
M + P +FSI+ + G+ + + L E
Sbjct: 529 DMISREIFPSYISFSILINGFCSLGLVSEAFRLWDE 564
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 138/304 (45%), Gaps = 10/304 (3%)
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
ALL A + +D A+ N +VYT + ++ A + + + +M+E
Sbjct: 194 ALLGAIVKVGWVDLAWKVYEDFVKSGNIV-NVYTLNIMVNALCKDGKLDNVGVYLSEMEE 252
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+ V + VT N ++ Y + G+ + ++ M KP ++T N +++ +G +
Sbjct: 253 KGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCM-AGKGLKPGLFTYNALINGLCKEGSYE 311
Query: 304 MMERWYEKFRNFGIDPETRTFN-ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+R ++ G+ P TFN +L+ + K+ +++ E +++ P S ++++
Sbjct: 312 RAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLIS-FSSI 370
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL-- 420
+ FS G+ FE+M G+ DT + LINGY V ++++ +++
Sbjct: 371 VGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRN---DDVSGALKMRNEMVE 427
Query: 421 -QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+V YN +++ + L + + ++K M E+ PD T + + Y K+G K
Sbjct: 428 RGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTK 487
Query: 480 VYAL 483
+L
Sbjct: 488 ALSL 491
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 105/261 (40%), Gaps = 36/261 (13%)
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
V + LI+ V A + +Q + +R + N +LG K G D +V
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
++S +V+T+N +++ G++D + + + G+ + T+N L+ AY ++
Sbjct: 214 DFVKSGNI-VNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRR 272
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
+ V EAF + M +G+K T+
Sbjct: 273 GL-------------------------VSEAFG----------LVDCMAGKGLKPGLFTY 297
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
LING G + + + + + N + +N ++ + +D+ E ERV+ M +
Sbjct: 298 NALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQ 357
Query: 455 KHCRPDSETFSIMTEAYAKEG 475
+ PD +FS + +++ G
Sbjct: 358 RGVVPDLISFSSIVGVFSRNG 378
>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 709
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 107/468 (22%), Positives = 203/468 (43%), Gaps = 17/468 (3%)
Query: 28 KTNKHRAQVPNFNLIHCSVTSTNKHTSFSSESAVAAKKRLWKEGEYPGVS------ETSI 81
+ + +++ N++L+ S+T +NK S RL+KE E + I
Sbjct: 224 RQDGYQSDFVNYSLVIQSLTRSNKIDS-------VMLLRLYKEIERDKLELDVQLVNDII 276
Query: 82 PGYRSKRTPIKNLKK-KLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFY 140
G+ P K L+ + + A T+ S + +A +FE L+ Q
Sbjct: 277 MGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELR-QSGI 335
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P+ Y LL K+G + A + +EM + G+ P Y+ L+ AY + A +
Sbjct: 336 KPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARI 395
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +M+ + QP+ + +S L+ D ++ + ++M V P+ N+V+ +
Sbjct: 396 VLKEMEA-GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTF 454
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
GK D ML S +PD T NT++ G+ + E +E G P
Sbjct: 455 GKFNCLDHAMTTFDRML-SEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPC 513
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+NI+I +YG + +D M ++ M+ T+ +++ + G E
Sbjct: 514 ATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLE 573
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M + G+K + + LIN YA GL + +++ R+ + + ++ N++I+A +
Sbjct: 574 EMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDR 633
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
E V + MKE +PD T++ + +A + KV + +E +
Sbjct: 634 RDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMI 681
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 141/300 (47%), Gaps = 4/300 (1%)
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE--LIE 235
TP Y AL+ A RN+ I++A + +M+ Q D YS +I++ + + + ++
Sbjct: 196 TPLTYNALIGACARNNDIEKALNLIAKMRQ-DGYQSDFVNYSLVIQSLTRSNKIDSVMLL 254
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
LY++++ + + N ++ G+ K+G + ++L GM ++ T+ +I+S
Sbjct: 255 RLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLL-GMAQATGLSAKTATLVSIISA 313
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
A+ G+ E +E+ R GI P TR +N L+ Y K S++ M K
Sbjct: 314 LADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPD 373
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
TY+ +I+A+ + G + ++M A ++ ++ F L+ G+ + G + K ++
Sbjct: 374 EHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLK 433
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + + FYN VI K + L + RM + PD T++ + + + K G
Sbjct: 434 EMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHG 493
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 116/306 (37%), Gaps = 40/306 (13%)
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
LY+ L+ A R+ + EAF+ L+Q +TL TY+ LI AC E L
Sbjct: 169 LYSILIHALGRSEKLYEAFL-LSQKQTLTPL-----TYNALIGACARNNDIEKALNLIAK 222
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M + + V ++V+ ++ D +
Sbjct: 223 MRQDGYQSDFVNYSLVIQSLTRSNKIDSV------------------------------- 251
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
M+ R Y++ ++ + + N +I + K K ++ + ++T
Sbjct: 252 ---MLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLV 308
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
++I A +D G E FE++ G+K T+ + L+ GY G S V K
Sbjct: 309 SIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKR 368
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
++ + Y+ +I A + A V K M+ +P+S FS + + G K
Sbjct: 369 GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKT 428
Query: 481 YALEQE 486
+ + +E
Sbjct: 429 FQVLKE 434
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 175/393 (44%), Gaps = 35/393 (8%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+++F +KE P Y +L L + ++ V+ +M +G EP Y L
Sbjct: 128 RAVEMFYRIKEFGC-DPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVL 186
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD----------AMRFELIE 235
L A C+N+ +D A L +M C P+ +Y+T+I + + A RFE +
Sbjct: 187 LKALCKNNKVDGAKKLLVEMSN-KGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFEPVV 245
Query: 236 TLYQ--------------------DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
++Y +M E+ ++PN ++ + ++ +G + +L+
Sbjct: 246 SVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQ 305
Query: 276 MLESATCKPDVWTMNTIL-SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
ML+ C P++ T+++++ F D ++ W + R FG+ P +N L+ +
Sbjct: 306 MLKRG-CHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSH 364
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
DK SV +M ++ TY ++I F+ G + Y + +M G + +
Sbjct: 365 GNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVY 424
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
++ F + S + + SK A +V +NA I A L E+V+++M++
Sbjct: 425 TSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQ 484
Query: 455 KH-CRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
++ C P+ T++ + + AK ++ Y L +E
Sbjct: 485 QYRCPPNIVTYNELLDGLAKANRIEEAYGLTRE 517
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 136/347 (39%), Gaps = 42/347 (12%)
Query: 108 VNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
++T++ ++ F AL ++ + QP Y L+ G + A VF
Sbjct: 315 IHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVF 374
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
M E G P Y +L+ + + ++ A N+M T C P+V Y+++++A
Sbjct: 375 LHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLT-SGCCPNVVVYTSMVEALCR 433
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
+F+ E+L + M + + P+ T N + G AG D E+V M + C P++
Sbjct: 434 HSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIV 493
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T N +L A +++ AYG R +M
Sbjct: 494 TYNELLDGLAKANRIE-------------------------EAYGLTREI--------FM 520
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
R ++ W++STYN ++ + G +M G D T +I Y G
Sbjct: 521 RGVE--WSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKA 578
Query: 408 HKVISSVRLAS---KLQIAENVSFYNAVISAC---IKADDLMEMERV 448
+ + + L S + + +S+ N + C + D ++ ER+
Sbjct: 579 ERAVQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERM 625
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 98/228 (42%), Gaps = 10/228 (4%)
Query: 264 GMFDQMERVLSGM-LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETR 322
G D ++ +L M L+ C D++ +++SV+ G + + + + FG DP +
Sbjct: 89 GQVDSVQYLLQQMKLQGFHCSEDLFI--SVISVYRQVGLAERAVEMFYRIKEFGCDPSVK 146
Query: 323 TFN-ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+N +L G+ R+ + V M++ F TYN +++A + +
Sbjct: 147 IYNHVLDTLLGENRI-QMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVE 205
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M +G + ++ +I+ G+ V +LA + + VS YNA+I+ K D
Sbjct: 206 MSNKGCCPNAVSYTTVISSMCEVGM---VKEGRQLAERFEPV--VSVYNALINGLCKERD 260
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ M EK P+ ++S + + G + ++L + L+
Sbjct: 261 YKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLK 308
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 60/139 (43%), Gaps = 3/139 (2%)
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
F T T+ +I + G ++Y +QM +G F +I+ Y GL + +
Sbjct: 71 FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV 130
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
+ +V YN V+ + + + + VY+ MK P+ T++++ +A
Sbjct: 131 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 190
Query: 472 AKEGMNDKVYALEQEKLQM 490
K N+KV ++ ++M
Sbjct: 191 CK---NNKVDGAKKLLVEM 206
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 156/349 (44%), Gaps = 4/349 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ +G E+ F EM G P Y ++ AYC+ I EAF
Sbjct: 201 PNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKL 260
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L M L P++ +Y+ +I + + + ++M +R P+ VT N ++ GY
Sbjct: 261 LRLM-ALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYC 319
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
G F Q + + M+++ P+V T T+++ G ++ + ++ R+ G+ P
Sbjct: 320 NVGNFHQALVLHAEMVKNGL-SPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNG 378
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
RT+ LI + ++ + +M+ M + F T TYN +I +G + ++
Sbjct: 379 RTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQE 438
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVIS-SVRLASKLQIAENVSFYNAVISACIKAD 440
M G D ++ +I+G+ K V + +K I+ +V+ Y+++I K
Sbjct: 439 MIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAK-GISPDVATYSSLIQGLCKQR 497
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
L E+ +++ M PD T++ + AY EG DK L E +Q
Sbjct: 498 RLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQ 546
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 160/368 (43%), Gaps = 23/368 (6%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y P T+ L+ G A + EMV+ G+ P YT L+ + C+ ++ A
Sbjct: 304 YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAM 363
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L+QM+ P+ TY+TLI + + ++M E TP +T N ++ G
Sbjct: 364 EFLDQMRD-RGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALING 422
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ G + +L M+E PDV + +TI+S F +++ + + GI P
Sbjct: 423 HCILGRMEDASGLLQEMIERGFI-PDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISP 481
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ T++ LI K+R ++ + + M L P TY ++I A+ GD
Sbjct: 482 DVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLH 541
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVS---FYNAVISAC 436
++M +G D T+ LING+ + + RL KL E+V YN +I C
Sbjct: 542 DEMIQKGFSPDIVTYNVLINGFNKQS---RTKEAKRLLLKLLYEESVPNEITYNTLIDNC 598
Query: 437 IKAD--------------DLM-EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
+ LM E +RV + M +K + + E ++++ ++K G +K Y
Sbjct: 599 NNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAY 658
Query: 482 ALEQEKLQ 489
L +E L
Sbjct: 659 NLYKEMLH 666
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 134/300 (44%), Gaps = 3/300 (1%)
Query: 191 RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMR-FELIETLYQDMDERSVTPN 249
R +LI++A +N K+ P V +Y+ ++ A + + ++ E ++++M E V+PN
Sbjct: 144 RVNLINKALSIVNLAKSY-GFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPN 202
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
T NI++ G+ AG +M G +E C P+V T NTI+ + ++ +
Sbjct: 203 VYTYNILIRGFCTAGNL-EMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLL 261
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
G++P ++N++I ++ + S ++E M K ++ T+N +I + ++
Sbjct: 262 RLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNV 321
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFY 429
G+ +M G+ + T+ LIN AG ++ + + + N Y
Sbjct: 322 GNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTY 381
Query: 430 NAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+I + L + ++ K M E P T++ + + G + L QE ++
Sbjct: 382 TTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIE 441
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 118/280 (42%), Gaps = 2/280 (0%)
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM- 269
C+ + ++K+C ++ P ++ N +L + ++
Sbjct: 128 CKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIA 187
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
E + M+ES P+V+T N ++ F G ++M ++ + G P T+N +I
Sbjct: 188 EGIFKEMVESGV-SPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIID 246
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
AY K R + ++ M +YN VI G K E+M
Sbjct: 247 AYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVP 306
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
D TF LINGY N G FH+ + K ++ NV Y +I++ KA +L
Sbjct: 307 DRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFL 366
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+M+++ P+ T++ + + ++++G + Y + +E ++
Sbjct: 367 DQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVE 406
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 129/303 (42%), Gaps = 21/303 (6%)
Query: 110 TVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNE 169
T+ + FS KQ +Q ++ EM++ + P TY L+ G+ E A + E
Sbjct: 383 TLIDGFSQQGFLKQAYQIMK--EMVENG--FTPTIITYNALINGHCILGRMEDASGLLQE 438
Query: 170 MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM 229
M+E G P Y+ +++ +CRN +++AF +M PDV TYS+LI+
Sbjct: 439 MIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEM-VAKGISPDVATYSSLIQGLCKQR 497
Query: 230 RFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM 289
R + L+Q+M + P+ VT ++ Y G D+ R+ M++ PD+ T
Sbjct: 498 RLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGF-SPDIVTY 556
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG---------------AYGKK 334
N +++ F + + +R K P T+N LI + K
Sbjct: 557 NVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMK 616
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
+ ++ V+E M + + YN +I S +G+ + +++M G + T
Sbjct: 617 GLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTI 676
Query: 395 CCL 397
L
Sbjct: 677 MAL 679
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 131/325 (40%), Gaps = 26/325 (8%)
Query: 58 ESAVAAKKRLWKEGEYPGVSE--TSIPGYRSKRTPIKNLKKKLERKAKAKAW-VNTVAET 114
E A + + + G P V T I G+ + K + K+E AK + V T +
Sbjct: 430 EDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSL 489
Query: 115 FSDHVLKKQWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE 173
+++ + +F EML P E TY L+ G + A ++ +EM+++
Sbjct: 490 IQGLCKQRRLGEVCDLFQEMLSLG--LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQK 547
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL-PNCQPDVYTYSTLIKAC------- 225
G P Y L+ + + S EA L +K L P+ TY+TLI C
Sbjct: 548 GFSPDIVTYNVLINGFNKQSRTKEAKRLL--LKLLYEESVPNEITYNTLIDNCNNLEFKS 605
Query: 226 -VDAMRFELIETLYQDMD-------ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
+ M+ ++ L + D ++ N N+++ G+ K G ++ + ML
Sbjct: 606 ALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEML 665
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
S V M S++ +V++ + ++ I E +LIG K+
Sbjct: 666 HSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRI-TEAALAKVLIGINSKEGNM 724
Query: 338 DKMSSVMEYMR-KLQFPWTSSTYNN 361
D + +V++ M P++S+ N
Sbjct: 725 DAVFNVLKDMALSGLLPYSSANLRN 749
>gi|222617300|gb|EEE53432.1| hypothetical protein OsJ_36514 [Oryza sativa Japonica Group]
Length = 607
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 153/308 (49%), Gaps = 9/308 (2%)
Query: 141 QPKEGTYMKLLVLLGKSG-QPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+P +Y ++ GK G F +M+++G+ P + + +LLAA R +++A
Sbjct: 13 RPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLKDGLCPDRKTFNSLLAACSRVGHLEDAR 72
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
++M L D+YTY+T I A EL + DM+ + V PN VT + ++ G
Sbjct: 73 AVFDEMIHL-GIGRDIYTYNTFIDAICKCGNMELAMQVLLDMEAKGVKPNVVTYSTLIDG 131
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
Y K +++ ++ M +S + D NT+L+++ G+ + ++ GI+
Sbjct: 132 YSKLEKYEEALKLCEKM-KSMRIQLDRVCYNTLLAIYVKAGKYAEIANVCDEMEELGIEK 190
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG---DAKHME 376
+T T+N LI YGK+ D +S +++ MRK + TY+ +I+ +S G DA ++
Sbjct: 191 DTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAFNVY 250
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
F++ G+K D F I+ A GL +S + +++ I NV YNA+I A
Sbjct: 251 LDFKE---SGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEMGIKPNVVTYNAIIDAF 307
Query: 437 IKADDLME 444
K+ +ME
Sbjct: 308 GKSKVMME 315
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 122/283 (43%), Gaps = 8/283 (2%)
Query: 212 QPDVYTYSTLIKAC----VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFD 267
+P +Y+ +I AC VD +RF L ++ M + + P+ T N +L + G +
Sbjct: 13 RPTTVSYNAVIDACGKGGVD-LRFTL--GYFRQMLKDGLCPDRKTFNSLLAACSRVGHLE 69
Query: 268 QMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
V M+ + D++T NT + G +++ + G+ P T++ L
Sbjct: 70 DARAVFDEMIHLGIGR-DIYTYNTFIDAICKCGNMELAMQVLLDMEAKGVKPNVVTYSTL 128
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
I Y K Y++ + E M+ ++ YN ++ + G + ++M G+
Sbjct: 129 IDGYSKLEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKAGKYAEIANVCDEMEELGI 188
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
+ DT T+ LINGY G V V+ K +A +V Y+ +I KA +
Sbjct: 189 EKDTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAFN 248
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
VY KE +PD FS + AK G+ + +L + +M
Sbjct: 249 VYLDFKESGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEM 291
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 122/289 (42%), Gaps = 21/289 (7%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ + K+G A V+ + E G++P L+++ + +N LI+ A
Sbjct: 225 PSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLIEWALSL 284
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQ--NIVLGG 259
LN M + +P+V TY+ +I A + ++ DM V + + N V G
Sbjct: 285 LNDMTEM-GIKPNVVTYNAIIDAFGKSKVMMEDDSEVGDMGIVGVYGGQIVRVANPVSRG 343
Query: 260 YGKAGMFDQMER---------VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYE 310
G++ +M R + M++ +P+V T + IL+ + + E
Sbjct: 344 -GRSATDVRMRRSQELFFILELFQKMVQQGV-RPNVVTFSAILNACSRCNSFEDAALLLE 401
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
+ R F + +L+G+ + ++ + S+ + ++ P +S+ YN + + G
Sbjct: 402 QLRLFDNFVYGVAYGLLVGS---REVWSQAQSLFNQLGRMDSPTSSAFYNALTDVLWHFG 458
Query: 371 D-AKHMEYTFEQMHAEGMKADTKTFCC---LINGYANAGLFHKVISSVR 415
K + FE ++ + FC L++ A + H + +VR
Sbjct: 459 QRRKAQQVVFEGINRRVWENTWGEFCLDLHLMSCGAAQAMVHAWLLNVR 507
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 168/367 (45%), Gaps = 17/367 (4%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE-EGIEPTPELYTA 184
+A+ + + + E QP + TY ++ + K G A + +M E I P +Y+A
Sbjct: 202 EAVALLDRMMEDGL-QPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSA 260
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
++ + C++ +A +M+ PD++TY+++I + R+ E L Q+M ER
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQE-KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
++P+ VT N ++ + K G F + E + ML P+ T ++++ F + ++D
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII-PNTITYSSMIDGFCKQNRLDA 378
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAY-GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
E + G P TFN LI Y G KR+ D M + E M + ++TYN +I
Sbjct: 379 AEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE-MTETGLVADTTTYNTLI 437
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ-- 421
F +GD ++M + G+ D T L++G + G + ++ K +
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497
Query: 422 ---------IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
+ +V YN +IS I +E E +Y+ M + PD+ T+S M +
Sbjct: 498 LDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557
Query: 473 KEGMNDK 479
K+ D+
Sbjct: 558 KQSRLDE 564
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 158/377 (41%), Gaps = 14/377 (3%)
Query: 114 TFSDHVLKK-QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE 172
T D + KK AL + ++E P Y ++ L K G+ A+ +F EM E
Sbjct: 224 TIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283
Query: 173 EGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE 232
+GI P Y +++ +C + +A L +M PDV TY+ LI A V +F
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE-RKISPDVVTYNALINAFVKEGKFF 342
Query: 233 LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTI 292
E LY +M R + PNT+T + ++ G+ K D E + ++ + C P++ T NT+
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFY-LMATKGCSPNLITFNTL 401
Query: 293 LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF 352
+ + ++D + G+ +T T+N LI + + +++ M
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Query: 353 PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE-----------GMKADTKTFCCLINGY 401
T + +++ D G K F+ M G++ D +T+ LI+G
Sbjct: 462 CPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGL 521
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
N G F + I + Y+++I K L E +++ M K P+
Sbjct: 522 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNV 581
Query: 462 ETFSIMTEAYAKEGMND 478
TF+ + Y K G D
Sbjct: 582 VTFTTLINGYCKAGRVD 598
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 140/343 (40%), Gaps = 54/343 (15%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W A Q+ + + E+ P TY L+ K G+ A ++++EM+ GI P Y
Sbjct: 305 RWSDAEQLLQEMLERKI-SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITY 363
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
++++ +C+ + +D A M T C P++ T++TLI A R + L +M
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMAT-KGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC-------------------- 282
E + +T T N ++ G+ G + +L M+ S C
Sbjct: 423 ETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482
Query: 283 -------------------------KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
+PDV T N ++S N+G+ E YE+ + GI
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P+T T++ +I K+ D+ + + + M F T+ +I + G
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISS 413
F +M G+ A+ T+ LI G+ G +F ++ISS
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISS 645
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 165/408 (40%), Gaps = 22/408 (5%)
Query: 81 IPGYRSKRTPIKNLKK----KLERKAKAKAWVNTVAETFSDHVLK--------KQWFQAL 128
+ G++ +P ++ + + R AKA + F LK K A+
Sbjct: 5 VCGFKCSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAI 64
Query: 129 QVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
+F +ML+ +P P + KL+ ++ + +P+L ++ +M + I + L+
Sbjct: 65 DLFSDMLRSRPL--PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIK 122
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSV 246
+C S + A T ++ L PDV T++TL+ CV+ E ++ +Q M E +
Sbjct: 123 CFCSCSKLPFALSTFGKITKL-GLHPDVVTFTTLLHGLCVEDRVSEALDFFHQ-MFETTC 180
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PN VT ++ G + G + +L M+E +P T TI+ KG
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL-QPTQITYGTIVDGMCKKGDTVSAL 239
Query: 307 RWYEKFRNFG-IDPETRTFNILIGAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
K I P ++ +I + K R D + E K FP TYN++I
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP-DLFTYNSMIV 298
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
F G E ++M + D T+ LIN + G F + I
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
N Y+++I K + L E ++ M K C P+ TF+ + + Y
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 131/330 (39%), Gaps = 7/330 (2%)
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
A F ++ + G+ P +T LL C + EA +QM C+P+V T++TL
Sbjct: 132 FALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFE-TTCRPNVVTFTTL 190
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
+ R L M E + P +T ++ G K G +L M E +
Sbjct: 191 MNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSH 250
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
P+V + I+ G+ + + + + GI P+ T+N +I + +
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+++ M + + TYN +I AF G E +++M G+ +T T+ +I+G+
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA---DDLMEMERVYKRMKEKHCR 458
L + + N+ +N +I A DD ME+ M E
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL---LHEMTETGLV 427
Query: 459 PDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
D+ T++ + + G + L QE +
Sbjct: 428 ADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 139/319 (43%), Gaps = 11/319 (3%)
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
E A +F++M+ P+ + L+ R D ++L Q + D+Y+++
Sbjct: 61 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPD-LVISLYQKMERKQIRCDIYSFNI 119
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
LIK + + + + + + P+ VT +L G + M E+
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFET- 178
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
TC+P+V T T+++ +G++ ++ G+ P T+ ++ KK
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK---GDT 235
Query: 341 SSVMEYMRKLQ-----FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
S + +RK++ P Y+ +I++ G + F +M +G+ D T+
Sbjct: 236 VSALNLLRKMEEVSHIIP-NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
+I G+ ++G + ++ + +I+ +V YNA+I+A +K E E +Y M +
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354
Query: 456 HCRPDSETFSIMTEAYAKE 474
P++ T+S M + + K+
Sbjct: 355 GIIPNTITYSSMIDGFCKQ 373
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 126 QALQVFEMLKE--------QPF--YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
AL++F+++++ PF +P TY L+ L G+ A +++ EM GI
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
P Y++++ C+ S +DEA + M + + P+V T++TLI A R +
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGS-KSFSPNVVTFTTLINGYCKAGRVDDGL 601
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
L+ +M R + N +T ++ G+ K G + + M+ S PD T+ +L+
Sbjct: 602 ELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV-YPDTITIRNMLTG 660
Query: 296 FANKGQVDMMERWYEKFR 313
+K ++ EK +
Sbjct: 661 LWSKEELKRAVAMLEKLQ 678
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 94/221 (42%), Gaps = 15/221 (6%)
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
+E + D+++ N ++ F + ++ + K G+ P+ TF L+ +
Sbjct: 105 MERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVE-- 162
Query: 337 YDKMSSVMEYMRKLQFPWTSS----TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
D++S +++ ++ F T T+ ++ G ++M +G++
Sbjct: 163 -DRVSEALDFFHQM-FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI 220
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQ----IAENVSFYNAVISACIKADDLMEMERV 448
T+ +++G G +S++ L K++ I NV Y+A+I + K + + +
Sbjct: 221 TYGTIVDGMCKKG---DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ M+EK PD T++ M + G L QE L+
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 171/401 (42%), Gaps = 50/401 (12%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F + E +P T+ L+ L + G+ A + + M+E+G++PT Y +
Sbjct: 167 EALNLFHQMFETT-CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ A L +M+ + + P+V YS +I + R + L+ +M E+
Sbjct: 226 VDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG 285
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+ T N ++ G+ +G + E++L MLE PDV T N +++ F +G+
Sbjct: 286 IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI-SPDVVTYNALINAFVKEGKFFEA 344
Query: 306 ERWYEKFRNFGIDPETRT-----------------------------------FNILIGA 330
E Y++ GI P T T FN LI
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG 404
Query: 331 Y-GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
Y G KR+ D M + E M + ++TYN +I F +GD ++M + G+
Sbjct: 405 YCGAKRIDDGMELLHE-MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQ-----------IAENVSFYNAVISACIK 438
D T L++G + G + ++ K + + +V YN +IS I
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+E E +Y+ M + PD+ T+S M + K+ D+
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 564
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 153/363 (42%), Gaps = 13/363 (3%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL + ++E P Y ++ L K G+ A+ +F EM E+GI P Y +++
Sbjct: 238 ALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+C + +A L +M PDV TY+ LI A V +F E LY +M R +
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLE-RKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PNT+T + ++ G+ K D E + ++ + C P++ T NT++ + ++D
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFY-LMATKGCSPNLITFNTLIDGYCGAKRIDDGM 415
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ G+ +T T+N LI + + +++ M T + +++
Sbjct: 416 ELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGL 475
Query: 367 SDMGDAKHMEYTFEQMHAE-----------GMKADTKTFCCLINGYANAGLFHKVISSVR 415
D G K F+ M G++ D +T+ LI+G N G F +
Sbjct: 476 CDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYE 535
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
I + Y+++I K L E +++ M K P+ TF+ + Y K G
Sbjct: 536 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 595
Query: 476 MND 478
D
Sbjct: 596 RVD 598
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 140/343 (40%), Gaps = 54/343 (15%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W A Q+ + + E+ P TY L+ K G+ A ++++EM+ GI P Y
Sbjct: 305 RWSDAEQLLQEMLERKI-SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITY 363
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
++++ +C+ + +D A M T C P++ T++TLI A R + L +M
Sbjct: 364 SSMIDGFCKQNRLDAAEHMFYLMAT-KGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC-------------------- 282
E + +T T N ++ G+ G + +L M+ S C
Sbjct: 423 ETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482
Query: 283 -------------------------KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
+PDV T N ++S N+G+ E YE+ + GI
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P+T T++ +I K+ D+ + + + M F T+ +I + G
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISS 413
F +M G+ A+ T+ LI G+ G +F ++ISS
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISS 645
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 169/411 (41%), Gaps = 28/411 (6%)
Query: 81 IPGYRSKRTPIKNLKK----KLERKAKAKAWVNTVAETFSDHVLKKQ--------WFQAL 128
+ G++ +P ++ + + R AKA + F LK Q A+
Sbjct: 5 VCGFKCSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAI 64
Query: 129 QVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
+F +ML+ +P P + KL+ ++ + +P+L ++ +M + I +T L+
Sbjct: 65 DLFSDMLRSRPL--PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIK 122
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSV 246
+C S + A T ++ L PDV T++TL+ CV+ E + L+ M E +
Sbjct: 123 CFCSCSKLPFALSTFGKITKL-GLHPDVVTFNTLLHGLCVEDRVSEAL-NLFHQMFETTC 180
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ----V 302
PN VT ++ G + G + +L M+E +P T TI+ G +
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL-QPTQITYGTIVDGMCKIGDTVSAL 239
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNN 361
D++ + E I P ++ +I + K R D + E K FP TYN+
Sbjct: 240 DLLRKMEEISH---IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP-DLFTYNS 295
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+I F G E ++M + D T+ LIN + G F +
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
I N Y+++I K + L E ++ M K C P+ TF+ + + Y
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 146/319 (45%), Gaps = 11/319 (3%)
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
E A +F++M+ P+ + L+ R D ++L Q + D+Y+++
Sbjct: 61 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPD-LVISLYQKMERKQIRCDIYSFTI 119
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
LIK + + + + + + P+ VT N +L G + + M E+
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFET- 178
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
TC+P+V T T+++ +G++ ++ G+ P T+ ++ G ++ D +
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD--GMCKIGDTV 236
Query: 341 SSVMEYMRKLQ-----FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
S+ ++ +RK++ P Y+ +I++ G + F +M +G+ D T+
Sbjct: 237 SA-LDLLRKMEEISHIIP-NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
+I G+ ++G + ++ + +I+ +V YNA+I+A +K E E +Y M +
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354
Query: 456 HCRPDSETFSIMTEAYAKE 474
P++ T+S M + + K+
Sbjct: 355 GIIPNTITYSSMIDGFCKQ 373
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 130/330 (39%), Gaps = 7/330 (2%)
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
A F ++ + G+ P + LL C + EA +QM C+P+V T++TL
Sbjct: 132 FALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE-TTCRPNVVTFTTL 190
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
+ R L M E + P +T ++ G K G +L M E +
Sbjct: 191 MNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISH 250
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
P+V + I+ G+ + + + + GI P+ T+N +I + +
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+++ M + + TYN +I AF G E +++M G+ +T T+ +I+G+
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA---DDLMEMERVYKRMKEKHCR 458
L + + N+ +N +I A DD ME+ M E
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL---LHEMTETGLV 427
Query: 459 PDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
D+ T++ + + G + L QE +
Sbjct: 428 ADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 126 QALQVFEMLKE--------QPF--YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
AL++F+++++ PF +P TY L+ L G+ A +++ EM GI
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
P Y++++ C+ S +DEA + M + + P+V T++TLI A R +
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGS-KSFSPNVVTFTTLINGYCKAGRVDDGL 601
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
L+ +M R + N +T ++ G+ K G + + M+ S PD T+ +L+
Sbjct: 602 ELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV-YPDTITIRNMLTG 660
Query: 296 FANKGQVDMMERWYEKFR 313
+K ++ EK +
Sbjct: 661 LWSKEELKRAVAMLEKLQ 678
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 92/221 (41%), Gaps = 15/221 (6%)
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
+E + D+++ ++ F + ++ + K G+ P+ TFN L+ +
Sbjct: 105 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVE-- 162
Query: 337 YDKMSSVMEYMRKLQFPWTSS----TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
D++S + ++ F T T+ ++ G ++M +G++
Sbjct: 163 -DRVSEALNLFHQM-FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI 220
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQ----IAENVSFYNAVISACIKADDLMEMERV 448
T+ +++G G +S++ L K++ I NV Y+A+I + K + + +
Sbjct: 221 TYGTIVDGMCKIG---DTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ M+EK PD T++ M + G L QE L+
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 46/97 (47%)
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
+++M + ++ D +F LI + + +S+ +KL + +V +N ++
Sbjct: 102 YQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCV 161
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
D + E ++ +M E CRP+ TF+ + +EG
Sbjct: 162 EDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREG 198
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 169/379 (44%), Gaps = 11/379 (2%)
Query: 108 VNTVAETFSDHVLKKQ--WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARK 165
V V+E+ VL+++ +L+ F+ L ++ TY ++ LG++ + +
Sbjct: 36 VCPVSESHVVKVLRQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSY 95
Query: 166 VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC 225
+ +M E + + EL+ ++ Y R++L ++ +++ C+P V Y+ ++ A
Sbjct: 96 LLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREF-GCEPSVKIYNLVLDAL 154
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
+ F++I LY +M + PN T N++L + G D ++L M + C PD
Sbjct: 155 LSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEM-SNKGCDPD 213
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
+ T++S G VD KF +P +N LI K+ + + +M
Sbjct: 214 DVSYTTVISSMCKLGDVDKARELAMKF-----EPVVPVYNALIHGVCKECRFKEAFDLMN 268
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
M +Y+ VI SDMG+ + F +M G + + +TF LI G+ G
Sbjct: 269 EMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRG 328
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ L + ++ NV YN +I ++ E V+ +M++ RP+ T+S
Sbjct: 329 RVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYS 388
Query: 466 IMTEAYAKEGMNDKVYALE 484
+ +AK G D V A E
Sbjct: 389 TIIYGFAKSG--DLVSACE 405
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 145/337 (43%), Gaps = 4/337 (1%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
++P Y L+ + K + + A + NEMV+ G++P Y+ +++ ++ +
Sbjct: 240 FEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSL 299
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+M + C+P+V T+++LIK R L+ M V+PN V N ++ G
Sbjct: 300 AVFGRM-FVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHG 358
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ-VDMMERWYEKFRNFGID 318
G D+ V + M E + +P+V T +TI+ FA G V E W K N G
Sbjct: 359 LCSDGNMDEAISVWNQM-EKDSIRPNVTTYSTIIYGFAKSGDLVSACETW-NKMINCGCR 416
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P + ++ + M+D+ +++ M P T T+NN I+ G +
Sbjct: 417 PNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNV 476
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
+QM + +T+ L++G A F + +R + ++ + YN ++
Sbjct: 477 LDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSF 536
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++ ++ +M + D+ T + AY K G
Sbjct: 537 NGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLG 573
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 3/208 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ V+ + E+ +P TY ++ KSG A + +N+M+ G P +YT +
Sbjct: 367 EAISVWNQM-EKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCM 425
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ S+ D+AF ++ M + C P V T++ IK A R E + M++
Sbjct: 426 VDVLCQMSMFDQAFDLIDNMIS-DGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYE 484
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN T N +L G +A F + ++ LE + D T NTI+ F+ G +
Sbjct: 485 CLPNIRTYNELLDGLFRANAFREACGLIRE-LEERKVEFDCVTYNTIMYGFSFNGMHQQV 543
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGK 333
+ K GI +T T N + AY K
Sbjct: 544 LQLLGKMLVNGIKLDTITVNTTVNAYCK 571
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 166/389 (42%), Gaps = 45/389 (11%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG------IEPTPELYTALLAAYCRNS 193
Y+P TY LL L +G LA K+ EM+ I+P Y ++ + C++
Sbjct: 193 YRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDG 252
Query: 194 LIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQ 253
LID+ +MK PDV YS++I R+E + L+ +M + V PN VT
Sbjct: 253 LIDKGKELFLEMKG-RGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTF 311
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
N+++ KAG ++ +L M++ PD +T NT++ F +G++D +
Sbjct: 312 NVLIDALCKAGKMEEANHLLKLMIQRGE-SPDTFTYNTLIDGFCLEGRIDDARDLFVSME 370
Query: 314 NFGIDPETRTFNILIGAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
+ GI+ + ++N+LI Y K RM + E M K P T TYN ++ G
Sbjct: 371 SKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMP-TVITYNTLLTGLFREGKV 429
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAG----------------------LFHKV 410
+ F +M + ++ T+ L++G +F+ +
Sbjct: 430 RDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCL 489
Query: 411 ISSVRLASKLQIAE-------------NVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
I + A K++IA NV Y +I K+ L + ++ M+EK C
Sbjct: 490 IDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGC 549
Query: 458 RPDSETFSIMTEAYAKEGMNDKVYALEQE 486
P+ TF+ + + + KV L QE
Sbjct: 550 APNLVTFNTLMRGFCQNDEMQKVVELLQE 578
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 121/314 (38%), Gaps = 24/314 (7%)
Query: 185 LLAAYCRNSLI--DEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
L + C++ I EAF N + + P + +++TL+ A R+ + +LY+ M
Sbjct: 61 FLKSNCKSGHIKRSEAFSVFNHLIDMQP-TPPISSFNTLLGAVAKIKRYFDVISLYKRMS 119
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
+ P+ +T NI++ Y D VL ML P+ T +++ ++
Sbjct: 120 LIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGH-SPNTVTFTSLVKGLCLGSRI 178
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAY---GKKRMYDKMSSVMEYMR---KLQFPWTS 356
K G P T+ L+ G + K+ M +
Sbjct: 179 SEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNL 238
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA-------GLFHK 409
Y +I++ G + F +M G+ D + +I+G + GLF++
Sbjct: 239 VCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNE 298
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
++ + NV +N +I A KA + E + K M ++ PD+ T++ + +
Sbjct: 299 MVDE-------GVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLID 351
Query: 470 AYAKEGMNDKVYAL 483
+ EG D L
Sbjct: 352 GFCLEGRIDDARDL 365
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 101/223 (45%), Gaps = 6/223 (2%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
KSG+ A+K++ EM+ + I PT Y LL R + +A+ +MK + + P+
Sbjct: 390 KSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMK-VHDLTPES 448
Query: 216 YTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
TY+ L+ C + E +E L+ ++ P+ N ++ G KA ++ R L
Sbjct: 449 CTYNILLDGLCKNNHLSEAME-LFHYLENHDFQPSIQIFNCLIDGLCKARKI-EIARELF 506
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
L +P+V T ++ GQ++ + + G P TFN L+ + +
Sbjct: 507 NRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQN 566
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
K+ +++ M + F +ST + V++ S D K+ EY
Sbjct: 567 DEMQKVVELLQEMAEKDFSPDASTISIVVDLLSK--DEKYREY 607
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 96 KKLERKAKAKAWVNTV-------AETFSDHVLKKQW--FQALQVFEMLKEQPFYQPKEGT 146
KKL R+ K + TV F + ++ W F ++V ++ P+ T
Sbjct: 398 KKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDL-------TPESCT 450
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y LL L K+ A ++F+ + +P+ +++ L+ C+ I+ A N++
Sbjct: 451 YNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRL- 509
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
+ +P+V TY+ +I + + E + L+ M+E+ PN VT N ++ G+ +
Sbjct: 510 SHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQN--- 566
Query: 267 DQMERVLSGMLESA--TCKPDVWTMNTILSVFA 297
D+M++V+ + E A PD T++ ++ + +
Sbjct: 567 DEMQKVVELLQEMAEKDFSPDASTISIVVDLLS 599
>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
Length = 680
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 107/468 (22%), Positives = 203/468 (43%), Gaps = 17/468 (3%)
Query: 28 KTNKHRAQVPNFNLIHCSVTSTNKHTSFSSESAVAAKKRLWKEGEYPGVS------ETSI 81
+ + +++ N++L+ S+T +NK S RL+KE E + I
Sbjct: 195 RQDGYQSDFVNYSLVIQSLTRSNKIDS-------VMLLRLYKEIERDKLELDVQLVNDII 247
Query: 82 PGYRSKRTPIKNLKK-KLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFY 140
G+ P K L+ + + A T+ S + +A +FE L+ Q
Sbjct: 248 MGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELR-QSGI 306
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P+ Y LL K+G + A + +EM + G+ P Y+ L+ AY + A +
Sbjct: 307 KPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARI 366
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +M+ + QP+ + +S L+ D ++ + ++M V P+ N+V+ +
Sbjct: 367 VLKEMEA-GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTF 425
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
GK D ML S +PD T NT++ G+ + E +E G P
Sbjct: 426 GKFNCLDHAMTTFDRML-SEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPC 484
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+NI+I +YG + +D M ++ M+ T+ +++ + G E
Sbjct: 485 ATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLE 544
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M + G+K + + LIN YA GL + +++ R+ + + ++ N++I+A +
Sbjct: 545 EMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDR 604
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
E V + MKE +PD T++ + +A + KV + +E +
Sbjct: 605 RDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMI 652
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 141/300 (47%), Gaps = 4/300 (1%)
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE--LIE 235
TP Y AL+ A RN+ I++A + +M+ Q D YS +I++ + + + ++
Sbjct: 167 TPLTYNALIGACARNNDIEKALNLIAKMRQ-DGYQSDFVNYSLVIQSLTRSNKIDSVMLL 225
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
LY++++ + + N ++ G+ K+G + ++L GM ++ T+ +I+S
Sbjct: 226 RLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLL-GMAQATGLSAKTATLVSIISA 284
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
A+ G+ E +E+ R GI P TR +N L+ Y K S++ M K
Sbjct: 285 LADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPD 344
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
TY+ +I+A+ + G + ++M A ++ ++ F L+ G+ + G + K ++
Sbjct: 345 EHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLK 404
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + + FYN VI K + L + RM + PD T++ + + + K G
Sbjct: 405 EMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHG 464
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 116/306 (37%), Gaps = 40/306 (13%)
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
LY+ L+ A R+ + EAF+ L+Q +TL TY+ LI AC E L
Sbjct: 140 LYSILIHALGRSEKLYEAFL-LSQKQTLTPL-----TYNALIGACARNNDIEKALNLIAK 193
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M + + V ++V+ ++ D +
Sbjct: 194 MRQDGYQSDFVNYSLVIQSLTRSNKIDSV------------------------------- 222
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
M+ R Y++ ++ + + N +I + K K ++ + ++T
Sbjct: 223 ---MLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLV 279
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
++I A +D G E FE++ G+K T+ + L+ GY G S V K
Sbjct: 280 SIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKR 339
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
++ + Y+ +I A + A V K M+ +P+S FS + + G K
Sbjct: 340 GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKT 399
Query: 481 YALEQE 486
+ + +E
Sbjct: 400 FQVLKE 405
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 130/266 (48%), Gaps = 4/266 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
P E T+ L+ + A+KVF EM +G++P Y +L+ C N +DEA
Sbjct: 296 HPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALG 355
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
++M + +P+V TY+ LI C M E E L D+ +R + PN +T N ++
Sbjct: 356 LQDKMSGM-GLKPNVVTYNALINGFCKKKMLKEAREML-DDIGKRGLAPNVITFNTLIDA 413
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
YGKAG D + S ML++ C P+V T N ++ F +G V + ++ G+
Sbjct: 414 YGKAGRMDDAFLLRSMMLDTGVC-PNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKA 472
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ T+NIL+ A KK K +++ M ++ + TYN +I+ + G++
Sbjct: 473 DLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVR 532
Query: 380 EQMHAEGMKADTKTFCCLINGYANAG 405
M +G +A+ T+ LI G+ N G
Sbjct: 533 TLMEKKGRRANIVTYNVLIKGFCNKG 558
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 156/375 (41%), Gaps = 5/375 (1%)
Query: 103 KAKAWVNTVA-ETFSDHVLKKQWFQ-ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQP 160
+ + VN V + + + K FQ A V E +K F P TY ++ K+G+
Sbjct: 222 RRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGF-SPSVITYNTIIDGYCKAGKM 280
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
A + EMV + I P + L+ +CR+ + A +M+ QP+V TY++
Sbjct: 281 FKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQR-QGLQPNVVTYNS 339
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
LI + + L M + PN VT N ++ G+ K M + +L + +
Sbjct: 340 LINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRG 399
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
P+V T NT++ + G++D + G+ P T+N LI + ++ +
Sbjct: 400 LA-PNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEA 458
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+ + M TYN +++A G+ + ++M G+ T+ LI+G
Sbjct: 459 RKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDG 518
Query: 401 YANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
Y G ++ L K N+ YN +I L E R+ M EK P+
Sbjct: 519 YFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPN 578
Query: 461 SETFSIMTEAYAKEG 475
T+ I+ + ++G
Sbjct: 579 RTTYDILRDEMMEKG 593
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 151/332 (45%), Gaps = 14/332 (4%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
+LV L K G+ + V+ EM+ I + ++ C+ +A + MK
Sbjct: 200 MLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAW- 258
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
P V TY+T+I A + + L ++M + + PN +T NI++ G+ +
Sbjct: 259 GFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAA 318
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
++V M + +P+V T N++++ + G++D +K G+ P T+N LI
Sbjct: 319 KKVFEEM-QRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALIN 377
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF---EQMHAEG 386
+ KK+M + +++ + K T+N +I+A+ G A M+ F M G
Sbjct: 378 GFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAY---GKAGRMDDAFLLRSMMLDTG 434
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDLM 443
+ + T+ CLI G+ G V + +LA +++ + ++ YN ++ A K +
Sbjct: 435 VCPNVSTYNCLIVGFCREG---NVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETR 491
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ R+ M E P T++ + + Y +EG
Sbjct: 492 KAVRLLDEMFEVGLNPSHLTYNALIDGYFREG 523
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 118/282 (41%), Gaps = 1/282 (0%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
+V T+ +I +F+ + +DM +P+ +T N ++ GY KAG + + +L
Sbjct: 228 NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALL 287
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
M+ + P+ T N ++ F V ++ +E+ + G+ P T+N LI
Sbjct: 288 KEMV-AKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCS 346
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
D+ + + M + TYN +I F K + + G+ + T
Sbjct: 347 NGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVIT 406
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
F LI+ Y AG + + NVS YN +I + ++ E ++ K M+
Sbjct: 407 FNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEME 466
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
+ D T++I+ +A K+G K L E ++ L S
Sbjct: 467 GNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPS 508
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 126/311 (40%), Gaps = 49/311 (15%)
Query: 185 LLAAYCRNSLIDEAFVTLNQMK------TLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
L+ AY +N +D A ++ + +C P ++ + V R ++E++Y
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNP-------MLVSLVKEGRIGVVESVY 217
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
++M R + N VT ++V+ G K G F + V
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDV-------------------------- 251
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
V+ M+ W G P T+N +I Y K K ++++ M + T
Sbjct: 252 ---VEDMKAW-------GFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEIT 301
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
+N +I+ F + + FE+M +G++ + T+ LING + G + + S
Sbjct: 302 FNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMS 361
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ + NV YNA+I+ K L E + + ++ P+ TF+ + +AY K G D
Sbjct: 362 GMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMD 421
Query: 479 KVYALEQEKLQ 489
+ L L
Sbjct: 422 DAFLLRSMMLD 432
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 63/150 (42%)
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
++L+ AY K D + F ++ + N ++ + G +E +++M
Sbjct: 163 DMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIR 222
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
+ + TF +ING G F K V + +V YN +I KA + +
Sbjct: 223 RRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFK 282
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
+ + K M K P+ TF+I+ + + ++
Sbjct: 283 ADALLKEMVAKRIHPNEITFNILIDGFCRD 312
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 160/344 (46%), Gaps = 2/344 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
+Y L+ LL +SG A +V+ MV EG++P+ + Y+AL+ A + + V L +M
Sbjct: 194 SYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEM 253
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ L +P+VYT++ I+ A + + +++ MD+ P+ VT +++ AG
Sbjct: 254 EDL-GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQ 312
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+ + + M + KPD T+L F + G +D + ++ + G P+ TF
Sbjct: 313 LENAKELFVKMKANGH-KPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFT 371
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
IL+ K R +D+ + + MRK TYN +I G + + M +
Sbjct: 372 ILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESV 431
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G++ T+ I+ + +G K + + I N+ NA + + + L E
Sbjct: 432 GVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREA 491
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ ++ ++E PDS T+++M + Y+K G D+ L E ++
Sbjct: 492 KTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIR 535
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 175/436 (40%), Gaps = 42/436 (9%)
Query: 86 SKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWF--QALQVFEMLKEQPFYQPK 143
S R ++ + L + KA +N + H+L + F +AL+V+ + + +P
Sbjct: 168 SIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGL-KPS 226
Query: 144 EGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLN 203
TY L+V LGK E+ + EM + G+ P +T + R IDEA+
Sbjct: 227 LKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFR 286
Query: 204 QMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKA 263
+M C PD+ TY+ LI A +A + E + L+ M P+ V +L +
Sbjct: 287 RMDD-EGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDF 345
Query: 264 GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
G D + S M E+ PDV T ++ V D ++ R GI P T
Sbjct: 346 GDLDTFKEFWSQM-EADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHT 404
Query: 324 FNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
+N LI G R+ D + +++ M + T+ TY I+ F G+ TFE+M
Sbjct: 405 YNTLICGLLRAGRIEDALK-LLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKM 463
Query: 383 HAEG-----------------------------------MKADTKTFCCLINGYANAGLF 407
A+G + D+ T+ ++ Y+ G
Sbjct: 464 KAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQV 523
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ ++ + + +V N++I + KA + E +++ RMK+ P T++ +
Sbjct: 524 DEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTL 583
Query: 468 TEAYAKEGMNDKVYAL 483
KEG K L
Sbjct: 584 LSGLGKEGRVQKAIEL 599
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 133/279 (47%), Gaps = 3/279 (1%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
+ + +A F+++++Q P TY L+ L ++G+ E A K+ + M G++PT
Sbjct: 381 RDFDEAFATFDVMRKQGIL-PNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYT 439
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y + + ++ +A T +MK P++ + + + + R +T++ +
Sbjct: 440 YITFIDYFGKSGETGKAVETFEKMKA-KGIVPNIVACNASLYSLAEMGRLREAKTMFNGL 498
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
E + P++VT N+++ Y K G D+ +LS M+ + C+PDV +N+++ G+
Sbjct: 499 RENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNG-CEPDVIVVNSLIDSLYKAGR 557
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
VD + +++ ++ + P T+N L+ GK+ K + E M + + ++N
Sbjct: 558 VDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNT 617
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+++ F + + F +M K D T+ +I G
Sbjct: 618 LLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYG 656
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 138/307 (44%), Gaps = 7/307 (2%)
Query: 96 KKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLG 155
KKL ++ + E H +K W +F+ +K P T+ LL + G
Sbjct: 780 KKLGISPTLASYNCLIGELLEVHYTEKAW----DLFKDMKNVGC-APDAFTFNMLLAVHG 834
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
KSG+ +++ EM+ +P Y ++++ +++ +D+A + + + +P
Sbjct: 835 KSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVS-SDFRPTP 893
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
TY LI R E L+++M + PN NI++ GYGK G + ++
Sbjct: 894 RTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKR 953
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
M+ +PD+ + ++ G+VD ++ + ++ G+DP+ +N +I GK +
Sbjct: 954 MVNEGI-RPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQ 1012
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
++ ++ MR TYN+++ G + + +E++ G++ D T+
Sbjct: 1013 RMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYN 1072
Query: 396 CLINGYA 402
LI GY+
Sbjct: 1073 ALIRGYS 1079
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 153/355 (43%), Gaps = 6/355 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A ++F + ++ P TY L+ L +GQ E A+++F +M G +P +Y L
Sbjct: 280 EAYEIFRRMDDEGC-GPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITL 338
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L + +D +QM+ PDV T++ L+ A F+ + M ++
Sbjct: 339 LDKFNDFGDLDTFKEFWSQMEA-DGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQG 397
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ PN T N ++ G +AG + ++L M ES +P +T T + F G+
Sbjct: 398 ILPNLHTYNTLICGLLRAGRIEDALKLLDTM-ESVGVQPTAYTYITFIDYFGKSGETGKA 456
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+EK + GI P N + + + + ++ +R+ S TYN +++
Sbjct: 457 VETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKC 516
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+S +G +M G + D LI+ AG + ++++
Sbjct: 517 YSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPT 576
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
V YN ++S K + + +++ M K C P++ +F+ + + + K ND+V
Sbjct: 577 VVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCK---NDEV 628
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 146/332 (43%), Gaps = 4/332 (1%)
Query: 143 KEGTYMKLLV-LLGKSGQPELARKVFNEMVEE-GIEPTPELYTALLAAYCRNSLIDEAFV 200
+E +++ LV +L K + A ++F++ ++ GI PT Y L+ ++A+
Sbjct: 750 REDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWD 809
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
MK + C PD +T++ L+ + + + LY++M R P+ +T NIV+
Sbjct: 810 LFKDMKNV-GCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSL 868
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K+ D+ ++ S+ +P T ++ A G+++ R +E+ ++G P
Sbjct: 869 AKSNNLDKALDFFYDLV-SSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPN 927
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
FNILI YGK + + + M +Y +++ G Y F
Sbjct: 928 CAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFN 987
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
++ + G+ D + +ING + + ++ I ++ YN+++ A
Sbjct: 988 ELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAG 1047
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
+ + +R+Y+ ++ PD T++ + Y+
Sbjct: 1048 MVEQAKRMYEELQLAGLEPDVFTYNALIRGYS 1079
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 147/350 (42%), Gaps = 14/350 (4%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K+ A Q+F+ ++ P +Y L+ L + E A +F +M G P
Sbjct: 766 KRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFT 825
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+ LLA + ++ I E F +M + C+PD TY+ +I + + + + D+
Sbjct: 826 FNMLLAVHGKSGKITELFELYKEMIS-RRCKPDAITYNIVISSLAKSNNLDKALDFFYDL 884
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
P T ++ G K G ++ R+ M + CKP+ N +++ + G
Sbjct: 885 VSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYG-CKPNCAIFNILINGYGKIGD 943
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ + +++ N GI P+ +++ IL+ D+ ++ YN
Sbjct: 944 TETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNR 1003
Query: 362 VIEAFSDMGDAKHMEYT---FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
+I +G ++ ME + +M G+ D T+ L+ N GL V + R+
Sbjct: 1004 IING---LGKSQRMEEALALYNEMRNRGIVPDLYTYNSLM---LNLGLAGMVEQAKRMYE 1057
Query: 419 KLQIA---ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+LQ+A +V YNA+I +++ VYK M C P+ T++
Sbjct: 1058 ELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYA 1107
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 132/318 (41%), Gaps = 1/318 (0%)
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
E+V GI L+ C++ A+ ++ P + +Y+ LI ++
Sbjct: 742 ELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEV 801
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
E L++DM P+ T N++L +GK+G ++ + M+ S CKPD T
Sbjct: 802 HYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMI-SRRCKPDAIT 860
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
N ++S A +D ++ + P RT+ LI K ++ + E M
Sbjct: 861 YNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMS 920
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
+ +N +I + +GD + F++M EG++ D K++ L++ AG
Sbjct: 921 DYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVD 980
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ + + + YN +I+ K+ + E +Y M+ + PD T++ +
Sbjct: 981 EALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLM 1040
Query: 469 EAYAKEGMNDKVYALEQE 486
GM ++ + +E
Sbjct: 1041 LNLGLAGMVEQAKRMYEE 1058
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 91/211 (43%), Gaps = 7/211 (3%)
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T N +L +V+ M +E + I + T+ + A + +M++V+ M
Sbjct: 124 TCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKM 183
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
RK F + +YN +I G + +M +EG+K KT+ L+
Sbjct: 184 RKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDS 243
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
V+ ++ L + NV + I +A + E +++RM ++ C PD T++++
Sbjct: 244 EMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVL 303
Query: 468 TEAYAKEGMNDKVYALEQEK-LQMLLEASGH 497
+A G LE K L + ++A+GH
Sbjct: 304 IDALCNAG------QLENAKELFVKMKANGH 328
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 67/156 (42%), Gaps = 3/156 (1%)
Query: 334 KRMYDKMSSVMEYMRKLQFP---WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
K M D + ++ + +FP T+ T N ++E + M FE M + ++ D
Sbjct: 97 KSMTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRD 156
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
T+ + + G ++ + + K N YN +I I++ E VY+
Sbjct: 157 LDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYR 216
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
RM + +P +T+S + A K+ ++ V L +E
Sbjct: 217 RMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKE 252
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 131/278 (47%), Gaps = 3/278 (1%)
Query: 213 PDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
P+VYTY+ LI+A C R E + L +DM PN VT N ++ + +AG D ER
Sbjct: 148 PNVYTYNILIRALCGRGHRKEALSIL-RDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAER 206
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
L GM+ KP++ T N++++ G+++ + +++ G+ P+ ++N L+G Y
Sbjct: 207 -LVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGY 265
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
K + SV M + T+ ++I G+ + QM G++ +
Sbjct: 266 CKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNE 325
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
TF LI+G+ G + +VR + +I +V YNA+I+ + E +
Sbjct: 326 VTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHE 385
Query: 452 MKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
M+ K +PD T+S + AY K + L Q+ L+
Sbjct: 386 MEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLE 423
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 170/403 (42%), Gaps = 60/403 (14%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P T+ ++ + K+G+ E ARKVF+EM+ EG+ P Y L+ YC+ EA
Sbjct: 217 KPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALS 276
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M T PDV T+++LI A E TL + M ER + N VT ++ G+
Sbjct: 277 VFAEM-TQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGF 335
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G D + GM + KP V N +++ + G++D + G+ P+
Sbjct: 336 CKKGFLDDALLAVRGMRQCRI-KPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPD 394
Query: 321 TRTFNILIGAYGK------------------------------------KRMYDKMSSVM 344
T++ +I AY K KR+ D +
Sbjct: 395 VVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDA-HVLF 453
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
+ M KL TY ++I+ G+ + ++M G+ D T+ LING + +
Sbjct: 454 KNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKS 513
Query: 405 GLFHKVISSVRLASKLQIAENV---SFYNAVISACIKAD--------------DLM-EME 446
+ + + +L KL E + + Y+A++ C KA+ LM E +
Sbjct: 514 A---RAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEAD 570
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+VY+ M +++ D +S++ + + G K + ++ LQ
Sbjct: 571 KVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQ 613
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 155/384 (40%), Gaps = 36/384 (9%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y P Y +L+ L + AR+ F+ M+ +G+ P Y L+ A C EA
Sbjct: 112 YVPSVLAYNAVLLALSDASLTS-ARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEAL 170
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L M+ C P+V TY+TL+ A A + E L M + + PN VT N ++ G
Sbjct: 171 SILRDMRG-AGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229
Query: 260 YGKAG-------MFDQMER-----------VLSGMLESATCK----------------PD 285
KAG +FD+M R L G A C PD
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
V T +++ V G ++ + R G+ TF LI + KK D +
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
MR+ + + YN +I + +G +M A+G+K D T+ +I+ Y
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 409
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
H + + + + Y+++I + L + ++K M + +PD T++
Sbjct: 410 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYT 469
Query: 466 IMTEAYAKEGMNDKVYALEQEKLQ 489
+ + + KEG ++ +L + ++
Sbjct: 470 SLIDGHCKEGNVERALSLHDKMVK 493
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/407 (20%), Positives = 160/407 (39%), Gaps = 57/407 (14%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL VF + ++ P T+ L+ ++ K+G E A + +M E G++ +TAL
Sbjct: 273 EALSVFAEMTQKGI-MPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTAL 331
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +C+ +D+A + + M+ +P V Y+ LI R + L +M+ +
Sbjct: 332 IDGFCKKGFLDDALLAVRGMRQC-RIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG 390
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+ VT + ++ Y K + MLE PD T ++++ V + ++
Sbjct: 391 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVL-PDAITYSSLIRVLCEEKRLSDA 449
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++ G+ P+ T+ LI + K+ ++ S+ + M K TY+ +I
Sbjct: 450 HVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLING 509
Query: 366 FSDMGDAKHME---YTFEQMHAEGMKADTK----TFCC---------------------- 396
S A+ ME F+ H E + A+TK CC
Sbjct: 510 LSK--SARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMN 567
Query: 397 -----------------------LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
LI+G+ AG K +S + + A N + ++I
Sbjct: 568 EADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLI 627
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+ ++E ++V +++ D+E + + EG D V
Sbjct: 628 RGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAV 674
>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 176/406 (43%), Gaps = 50/406 (12%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE-GIEPTPELYTA 184
++++VF ++K P T+ LL +L K G+ +A+KV++EM+ G+ P +
Sbjct: 167 ESIKVFTIMKSHGV-SPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNI 225
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTY-------------------------- 218
L+ +C N ++D+ F N + C+PDV TY
Sbjct: 226 LIRGFCMNGMVDDGFRIFNDLSRF-GCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKK 284
Query: 219 -----------STLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFD 267
+TLI+ E ++++M + + N +T N ++ G +A F+
Sbjct: 285 SVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFE 344
Query: 268 QMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
+++ +L G T PD T NT++ + G +D + +E+ I P++ T++ L
Sbjct: 345 KIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSAL 404
Query: 328 IGAYGKKRMYDKMSSVMEYM--RKLQFPWTS-----STYNNVIEAFSDMGDAKHMEYTFE 380
+ + + Y+K +++ + RK+ + YN + + + G K E F
Sbjct: 405 VRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFR 464
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
Q+ G + D ++ LI G+ G F + L + + Y ++I+ + D
Sbjct: 465 QLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLHMD 523
Query: 441 D-LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
L+ ++ + K ++ H RP+S TF + ++G + +L Q
Sbjct: 524 KPLLALQSLEKMLRSSH-RPNSSTFHSILAKLLEQGRTSESASLIQ 568
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 151/341 (44%), Gaps = 7/341 (2%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA--FVTLNQMKTLPNCQPDVYTYST 220
A + FN E G T + Y ++L RN ++ A F+ + ++ + + +++
Sbjct: 95 ALQFFNWAQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNS 154
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
L++ A F+ ++ M V+P+ VT N +L K G + ++V ML +
Sbjct: 155 LMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTY 214
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
PD +T N ++ F G VD R + FG +P+ T+N L+ +
Sbjct: 215 GVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVA 274
Query: 341 SSVMEYMRKLQFPWTSS--TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+V++ M K + TY +I + + + FE+M +G+KA+ T+ LI
Sbjct: 275 YNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLI 334
Query: 399 NGYANAGLFHKVISSVR-LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
G A F K+ + A + + +N ++ A +L + +V++RM E
Sbjct: 335 KGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKI 394
Query: 458 RPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ--MLLEASG 496
+PDS T+S + + + G +K L + L+ +LL G
Sbjct: 395 QPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDG 435
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 153/346 (44%), Gaps = 8/346 (2%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L + G+ E+A ++++M++EG+ P Y AL+ C A
Sbjct: 377 RPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALK 436
Query: 201 TLNQMK---TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVL 257
+ M+ +L N Q TY+ +IK E L++ M + P VT N ++
Sbjct: 437 IFHWMEGHGSLANTQ----TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLI 492
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
GY G + R+L M E+ C+PD WT N ++S F+ G+++ ++++ G+
Sbjct: 493 NGYLTKGNVNNAARLLDLMKENG-CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 551
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
+P ++ LI + K D S++E M ++ +YN VI S E
Sbjct: 552 NPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEK 611
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
++M +G+ + T+ LI+G G K + N+ Y+++I
Sbjct: 612 ICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 671
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ E E + K M+ K PD TF+ + + + G D + L
Sbjct: 672 QEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLL 717
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 165/414 (39%), Gaps = 38/414 (9%)
Query: 108 VNTVAETFSDHVLKKQWFQALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKV 166
V T H + A VF+ M+KE P TY L+ L G+ + A +
Sbjct: 275 VFTYTSLILGHCRNRNLDLAFGVFDRMVKEG--CDPNSVTYSTLINGLCNEGRVDEALDM 332
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
EM+E+GIEPT YT + A C +EA + +MK C+P+V TY+ LI
Sbjct: 333 LEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKK-RGCRPNVQTYTALISGLS 391
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV-------------- 272
+ E+ LY M + + PNTVT N ++ G F ++
Sbjct: 392 RLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQ 451
Query: 273 ----------LSGMLESATCK----------PDVWTMNTILSVFANKGQVDMMERWYEKF 312
L G +E A P V T NT+++ + KG V+ R +
Sbjct: 452 TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM 511
Query: 313 RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
+ G +P+ T+N L+ + K + S + M + +Y +I+ S G
Sbjct: 512 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKV 571
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAV 432
E+M G + +++ +ING + F + ++ + NV Y +
Sbjct: 572 DIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTL 631
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
I + +++ M+++ C P+ T+S + +EG D+ L +E
Sbjct: 632 IDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKE 685
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 139/335 (41%), Gaps = 37/335 (11%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP T+ L+ +L K G+ A + +++ + + P YT+L+ +CRN +D AF
Sbjct: 237 QPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFG 296
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
++M C P+ TYSTLI + R + + ++M E+ + P T + +
Sbjct: 297 VFDRM-VKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITAL 355
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
++ +++ M + C+P+V T ++S + G++++ Y K G+ P
Sbjct: 356 CAIEHEEEAIELVARM-KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 414
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T T+N LI + + +M + TYN +I+ GD + FE
Sbjct: 415 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 474
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M G T+ LINGY G NV+ NA
Sbjct: 475 KMLKMGPLPTVVTYNTLINGYLTKG-------------------NVN--NAA-------- 505
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
R+ MKE C PD T++ + ++K G
Sbjct: 506 ------RLLDLMKENGCEPDEWTYNELVSGFSKWG 534
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 146/364 (40%), Gaps = 29/364 (7%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY +++ L G E A +F +M++ G PT Y L+ Y ++ A L+ M
Sbjct: 452 TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM 511
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
K C+PD +TY+ L+ + E +Q+M E + PN V+ ++ G+ K G
Sbjct: 512 KE-NGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGK 570
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D +L M E C P+V + N +++ + + + E+ +K G+ P T+
Sbjct: 571 VDIALSLLERM-EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYT 629
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
LI + + M K + TY+++I G A E ++M +
Sbjct: 630 TLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERK 689
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME- 444
G+ D TF LI+G+ G +R + N Y+ ++ K L+E
Sbjct: 690 GLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEE 749
Query: 445 -----MERVYK------------------RMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
E VY RM E C P +T+S + ++G + Y
Sbjct: 750 KVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKG---RFY 806
Query: 482 ALEQ 485
EQ
Sbjct: 807 EAEQ 810
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 150/372 (40%), Gaps = 62/372 (16%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
A ++ +++KE +P E TY +L+ K G+ E A F EMVE G+ P P YT L
Sbjct: 503 NAARLLDLMKENG-CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTL 561
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + ++ +D A L +M+ + C P+V +Y+ +I RF E + M E+
Sbjct: 562 IDGHSKDGKVDIALSLLERMEEM-GCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQG 620
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ PN +T ++ G + G ++ M E C P+++T ++++ +G+ D
Sbjct: 621 LLPNVITYTTLIDGLCRNGRTQFAFKIFHDM-EKRKCLPNLYTYSSLIYGLCQEGKADEA 679
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E ++ G+ P+ TF ++I+
Sbjct: 680 EILLKEMERKGLAPDEVTFT-----------------------------------SLIDG 704
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF--------HKVISSVRLA 417
F +G H +M G K + +T+ L+ G L H+ + S
Sbjct: 705 FVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPH 764
Query: 418 SK---LQIAENV-------------SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
K +I N+ Y+ ++S + E E++ K MKE+ PD
Sbjct: 765 EKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDR 824
Query: 462 ETFSIMTEAYAK 473
E + + A+ K
Sbjct: 825 EIYYSLLIAHCK 836
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 129/309 (41%), Gaps = 27/309 (8%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+ ++ +A ++ + + EQ P TY L+ L ++G+ + A K+F++M + P
Sbjct: 603 ENRFSEAEKICDKMAEQGLL-PNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 661
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
Y++L+ C+ DEA + L +M+ PD T+++LI V R + L +
Sbjct: 662 TYSSLIYGLCQEGKADEAEILLKEMER-KGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRR 720
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGM------------------------FDQMERVLSGM 276
M + PN T +++L G K + F+ + +L+ M
Sbjct: 721 MVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARM 780
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
E C+P + T +T++S KG+ E+ + + G P+ + L+ A+ K
Sbjct: 781 SEIG-CEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLE 839
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
D + + F S Y +I A G + + F+ M + AD +
Sbjct: 840 VDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTV 899
Query: 397 LINGYANAG 405
L++G G
Sbjct: 900 LVDGLLKEG 908
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/384 (20%), Positives = 156/384 (40%), Gaps = 28/384 (7%)
Query: 111 VAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEM 170
VAE + H K +Q F + ++PFY+ ++ +L N +
Sbjct: 120 VAEIVAVH---KDTESVIQFFYWISKRPFYKHNMNCFISML----------------NRL 160
Query: 171 VEEGIEPTPELYTALLAAYCRNSL-IDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM 229
V + + + L+ CRN I LN++ + +Y+ +TL+ +
Sbjct: 161 VRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGM-GFGFSLYSCNTLL---IQLA 216
Query: 230 RFELIE---TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
+FE++E LY+ M + P+ +T N ++ K G + E +LS + + PDV
Sbjct: 217 KFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDL-SPDV 275
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
+T +++ +D+ +++ G DP + T++ LI + D+ ++E
Sbjct: 276 FTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEE 335
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M + T TY I A + + +M G + + +T+ LI+G + G
Sbjct: 336 MIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGK 395
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
I K + N YNA+I+ +++ M+ +++T++
Sbjct: 396 LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNE 455
Query: 467 MTEAYAKEGMNDKVYALEQEKLQM 490
+ + G +K L ++ L+M
Sbjct: 456 IIKGLCLGGDIEKAMVLFEKMLKM 479
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 163/357 (45%), Gaps = 4/357 (1%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
LK + F+AL +++ + F E Y L+ L K G+ A ++ +M + G+ P
Sbjct: 138 LKGRTFEALNLYDHAVSKGF-SFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNL 196
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+Y ++ C+ L+ EA ++M C DV+TY++LI A +F+ L
Sbjct: 197 IMYNMVVDGLCKEGLVTEACGLCSEMVGKGICI-DVFTYNSLIHGFCGAGQFQGAVRLLN 255
Query: 240 DMD-ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
+M + V P+ T NI++ K GM + V M++ +PDV + N +++ +
Sbjct: 256 EMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGL-EPDVVSCNALMNGWCL 314
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
+G + + +++ G P +++ LI Y K +M D+ ++ M + + T
Sbjct: 315 RGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVT 374
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN +++ S G + E M A G D T+ L++ Y K ++ +
Sbjct: 375 YNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIV 434
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
I+ N+ YN +I K + + +++ + K CRP+ T++IM +EG
Sbjct: 435 DTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREG 491
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 135/331 (40%), Gaps = 5/331 (1%)
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
GQ LA V ++V+ G P T L+ C EA + L D
Sbjct: 105 GQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEA-LNLYDHAVSKGFSFDEVC 163
Query: 218 YSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
Y TLI C + IE L + M++ V PN + N+V+ G K G+ + + S M
Sbjct: 164 YGTLINGLCKMGKTRDAIE-LLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEM 222
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWY-EKFRNFGIDPETRTFNILIGAYGKKR 335
+ C DV+T N+++ F GQ R E + P+ TFNIL+ A K
Sbjct: 223 VGKGICI-DVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLG 281
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
M + +V M K + N ++ + G + F++M G + ++
Sbjct: 282 MVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYS 341
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
LINGY + + + + + + + YN ++ K+ ++ + + M+
Sbjct: 342 TLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRAS 401
Query: 456 HCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
PD T++++ + Y K DK AL Q
Sbjct: 402 GQAPDLITYNVLLDDYLKRECLDKALALFQH 432
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 2/204 (0%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A++VF+ MVE G P Y+ L+ YC+ ++DEA L +M N PD TY+ L+
Sbjct: 321 AKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQ-RNLVPDTVTYNCLL 379
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
+ R L + M P+ +T N++L Y K D+ + ++++
Sbjct: 380 DGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGI- 438
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
P++ T N ++ G++ + ++ G P RT+NI+I ++ + D+ +
Sbjct: 439 SPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEA 498
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAF 366
++ M FP + T++ ++ A
Sbjct: 499 LLLEMVDDGFPPNAVTFDPLVRAL 522
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 101/235 (42%), Gaps = 11/235 (4%)
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMER 307
P+ V+ N +L K + + + S + T KP + T++ ++ + GQ+ +
Sbjct: 53 PSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFS 112
Query: 308 WYEKF--RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
K R FG+DP T T ++ G K R ++ + ++ ++ F + Y +I
Sbjct: 113 VMAKIVKRGFGVDPFTLT-TLMKGLCLKGRTFEAL-NLYDHAVSKGFSFDEVCYGTLING 170
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL---QI 422
MG + +M G++ + + +++G GL V + L S++ I
Sbjct: 171 LCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGL---VTEACGLCSEMVGKGI 227
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKH-CRPDSETFSIMTEAYAKEGM 476
+V YN++I A R+ M K RPD TF+I+ +A K GM
Sbjct: 228 CIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGM 282
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 164/343 (47%), Gaps = 20/343 (5%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA--- 198
P TY L+ + G A ++F+EM+E+ I PT +YT L+ C S I EA
Sbjct: 191 PNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESM 250
Query: 199 FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
F T+ LPN +YTY+T++ + LYQ+M + PN VT I++
Sbjct: 251 FRTMRNSGMLPN----LYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILID 306
Query: 259 GYGKAGMFDQMERVLSGMLESAT--CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG 316
G K D+M +++ A+ P+++ N ++ + G + + +
Sbjct: 307 GLCKT---DEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363
Query: 317 IDPETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
I P+ T++ILI G G RM ++ +++ M+K F + TYN +I+ + G+ +
Sbjct: 364 ILPDVFTYSILIKGLCGVDRM-EEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKA 422
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI---AENVSFYNAV 432
QM +G++ + TF LI+GY AG K+ +++ L +++ I +V Y A+
Sbjct: 423 IEVCSQMTEKGIEPNIITFSTLIDGYCKAG---KMEAAMGLYTEMVIKGLLPDVVAYTAL 479
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
I K + E R++K M+E P+ T S + + K+G
Sbjct: 480 IDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDG 522
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 144/351 (41%), Gaps = 6/351 (1%)
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE-EGIEPTPELYTALLAA 188
+ +L Y L+ L S + + VFN + E + TP ++ L+ A
Sbjct: 76 IIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSVFNVLSRLESSKFTPNVFGVLIIA 135
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP 248
+ L++EA +M LP Q L+K RF+ + +Y DM R +P
Sbjct: 136 FSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVKK----GRFDTMWKVYGDMVARGASP 191
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW 308
N VT ++ G + G F + R+ M+E P V ++ + ++ E
Sbjct: 192 NVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKI-FPTVVIYTILIRGLCGESRISEAESM 250
Query: 309 YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD 368
+ RN G+ P T+N ++ Y K K + + M T+ +I+
Sbjct: 251 FRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCK 310
Query: 369 MGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSF 428
+ M + G+ + + CLI+GY AG + +S K +I +V
Sbjct: 311 TDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFT 370
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
Y+ +I D + E + + + MK+K P++ T++ + + Y KEG +K
Sbjct: 371 YSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEK 421
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 135/333 (40%), Gaps = 2/333 (0%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L K G+ + KV+ +MV G P Y L+ CR +AF ++M P
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE-KKIFP 226
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
V Y+ LI+ R E++++ M + PN T N ++ GY K + +
Sbjct: 227 TVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELY 286
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
ML P+V T ++ ++ ++ +FG+ P +N LI Y K
Sbjct: 287 QEMLGDGLL-PNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCK 345
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+ S+ + K + TY+ +I+ + + + ++M +G + T
Sbjct: 346 AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+ LI+GY G K I ++ I N+ ++ +I KA + +Y M
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV 465
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
K PD ++ + + + K+G + + L +E
Sbjct: 466 IKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKE 498
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+ P TY L+ K G E A +V ++M E+GIEP ++ L+ YC+ ++ A
Sbjct: 399 FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAM 458
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+M + PDV Y+ LI + L+++M E + PN T + ++ G
Sbjct: 459 GLYTEM-VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDG 517
Query: 260 YGKAG 264
K G
Sbjct: 518 LCKDG 522
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 99/249 (39%), Gaps = 41/249 (16%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL--YTALLAAYCRNSLIDE 197
++P L+ + +G A +F+E+ P+ L +T++++AY N ++
Sbjct: 662 FEPIIFLQTSLISMYSATGNVADAHNMFDEI------PSKNLISWTSVISAYVDNQRPNK 715
Query: 198 AFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS------------ 245
A QM+ + + QPD+ T + + AC D ++ E ++ + R
Sbjct: 716 ALQLFRQMQ-MDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLI 774
Query: 246 -----------------VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
V PN VT VL AG+ ++ ++ M E + +P +
Sbjct: 775 NMYSKCGEIGTARRFSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISH 834
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
++ + G ++ YE + P + L+GA + M+DK V ++
Sbjct: 835 FGCMVDLLCRAG---LLTEAYEFILKMPVRPNAVVWRTLLGACSLQGMWDKKMLVRNQIK 891
Query: 349 KLQFPWTSS 357
+ + P SS
Sbjct: 892 QRRDPGCSS 900
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 104/269 (38%), Gaps = 53/269 (19%)
Query: 170 MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM 229
++ G EP L T+L++ Y + +A N +P+ ++ +++++I A VD
Sbjct: 657 VINFGFEPIIFLQTSLISMYSATGNVADAH---NMFDEIPS--KNLISWTSVISAYVDNQ 711
Query: 230 RFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM 289
R PN Q +F QM+ +PD+ T+
Sbjct: 712 R-----------------PNKALQ-----------LFRQMQM--------DDVQPDIVTV 735
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR- 348
LS A+ G +DM E + R+ G+D + N LI MY K + R
Sbjct: 736 TVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLI------NMYSKCGEIGTARRF 789
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE-GMKADTKTFCCLINGYANAGLF 407
L P T+ V+ A S G + + F M + ++ F C+++ AGL
Sbjct: 790 SLVLP-NDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLL 848
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISAC 436
+ + K+ + N + ++ AC
Sbjct: 849 TE---AYEFILKMPVRPNAVVWRTLLGAC 874
>gi|115475155|ref|NP_001061174.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|40253652|dbj|BAD05595.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623143|dbj|BAF23088.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|125602452|gb|EAZ41777.1| hypothetical protein OsJ_26318 [Oryza sativa Japonica Group]
gi|215695295|dbj|BAG90486.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704436|dbj|BAG93870.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 609
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 216/484 (44%), Gaps = 32/484 (6%)
Query: 2 GMASASASLSFSSSLLPSPLP-----HPHDTKTNKHRAQVPNFNLIHCSVTSTNKHTSFS 56
+ A + LSFSSSL + + H K+++ V + L K
Sbjct: 6 AIGGARSPLSFSSSLCNAKVSCGLALHNVKIKSSRRLEVVCHGMLTTRKFMQKKKKEEVY 65
Query: 57 SESAVAAKKRLWK----EGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVA 112
++A A+++ W+ E E G + + + RSK+ P+ + V
Sbjct: 66 KDAADEAEQKNWRMMMREIEESGSAVSILKTQRSKKEPLPR---------------DAVL 110
Query: 113 ETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE 172
T K+W ++ E L+ Q ++ E ++ L+ GK G A +V M +
Sbjct: 111 GTLMRFKQLKKWNLVSEILEWLRTQHWWNFSEMDFLMLVTAYGKLGDFSRAERVLKYMNK 170
Query: 173 EGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE 232
+G +P+ TAL+ AY R +A +M+T +P TY ++K+ V+ +++
Sbjct: 171 KGYKPSVISQTALMEAYGRAKQYRKAEAVFRRMQT-SGPEPSAVTYQIILKSFVEGDKYK 229
Query: 233 LIETLYQDM-DER--SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM 289
E +++D+ +E+ S P+ ++++ Y KAG + Q ++ + M E V T
Sbjct: 230 EAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLSTV-TF 288
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
N+++S N +V + Y++ + + P+ ++++LI AYGK R ++ +V E M
Sbjct: 289 NSLMSFETNYKEVSSI---YDQMQRTALKPDVVSYSLLIKAYGKARREEEALAVFEEMLD 345
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
T +YN +I+AF+ G + F+ M ++ D ++ ++ Y NA
Sbjct: 346 AGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRVEPDLCSYTTMVLAYVNASDMDG 405
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
R + + NV Y ++ K +++ + RVY+RM+ + P+ ++ + +
Sbjct: 406 AEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIYTTIMD 465
Query: 470 AYAK 473
+ +
Sbjct: 466 VHGR 469
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 146/358 (40%), Gaps = 39/358 (10%)
Query: 166 VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIK 223
+ M E G P LL C ++EA L+ M NC P+V TY+T+I
Sbjct: 148 LLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIID 207
Query: 224 ACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK 283
A + E + Q M ++ V + VT + ++ G KA D+ E VL M++ K
Sbjct: 208 GLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGV-K 266
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
PDV T NTI+ VD E + + G+ P+ T+N +I K + D+ V
Sbjct: 267 PDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGV 326
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT------------ 391
+++M TYN +I + G+ K + E+M+A G+ D
Sbjct: 327 LQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCK 386
Query: 392 --------KTFCCLI---------------NGYANAGLFHKVISSVRLASKLQIAENVSF 428
K F C+I +GYA G + + L I+ N
Sbjct: 387 NGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYI 446
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALEQ 485
+N V+ A K + E ++ RM + PD T+ I+ +A K G ++D V Q
Sbjct: 447 FNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQ 504
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 149/341 (43%), Gaps = 10/341 (2%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L + G+ E F +++ G + LL C +DEA
Sbjct: 87 RPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMD 146
Query: 201 TLNQMKTLP--NCQPDVYTYSTLIKACVDAMR----FELIETLYQDMDERSVTPNTVTQN 254
L ++ +P C P+V + +TL+K + R EL+ T+ +D + TPN VT N
Sbjct: 147 IL--LRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAED-GGGNCTPNVVTYN 203
Query: 255 IVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRN 314
++ G KA D+ E VL M++ K DV T +TI+ VD E + +
Sbjct: 204 TIIDGLCKAQAVDRAEGVLQHMIDKGV-KLDVVTYSTIIDGLCKAQAVDRAEGVLQHMID 262
Query: 315 FGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKH 374
G+ P+ T+N +I K + D+ V+++M TYN +I+
Sbjct: 263 KGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDR 322
Query: 375 MEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVIS 434
+ + M + +K D +T+ CLI+GY + G + +V+ + + +V Y+ ++
Sbjct: 323 ADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLD 382
Query: 435 ACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
K E +++ M K +P+ + I+ YA G
Sbjct: 383 YLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARG 423
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 165/397 (41%), Gaps = 56/397 (14%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W + ++ E + + P TY LL L K+G+ ARK+F M+ +GI+P +Y
Sbjct: 354 EWKEVVRRLEEMYARGL-DPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIY 412
Query: 183 TALL-----------------------------------AAYCRNSLIDEAFVTLNQMKT 207
LL AY + ++IDEA ++M
Sbjct: 413 GILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQ 472
Query: 208 LPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFD 267
PDV TY LI A R + + M VTPN+V N ++ G ++
Sbjct: 473 -HGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWE 531
Query: 268 QMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
+ E + M + +P+V NTI+ N+GQV + +R + G+ P ++N L
Sbjct: 532 KAEELFFEMWDQGV-RPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTL 590
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
IG + D+ + +++ M + +Y+ ++ + G + F +M +G+
Sbjct: 591 IGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGV 650
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN---------VSFYNAVISACIK 438
T+ ++ GLFH + R + ++ N + YN +++ K
Sbjct: 651 TPGAVTYSTILQ-----GLFH----TRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCK 701
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + E ++++ + K RP+ TF+IM + K G
Sbjct: 702 TNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGG 738
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 146/372 (39%), Gaps = 35/372 (9%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY ++ L K+ + A V M+++G++P Y ++ C+ +D A L M
Sbjct: 236 TYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHM 295
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+PDV TY+T+I A + + + Q M ++ V P+ T N ++ GY G
Sbjct: 296 ID-KGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGE 354
Query: 266 FDQMER-------------------VLSGMLESATC---------------KPDVWTMNT 291
+ ++ R +L + ++ C KP+V
Sbjct: 355 WKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGI 414
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
+L +A +G + + + GI P FNI++ AY KK M D+ + M +
Sbjct: 415 LLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHG 474
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
TY +I+A +G F QM +G+ ++ F L+ G + K
Sbjct: 475 LSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAE 534
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
+ NV F+N ++ +M +R+ M+ RP+ +++ + +
Sbjct: 535 ELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGH 594
Query: 472 AKEGMNDKVYAL 483
G D+ L
Sbjct: 595 CLAGRTDEAAQL 606
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/355 (19%), Positives = 142/355 (40%), Gaps = 7/355 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P + +L K + A +F+ M + G+ P Y L+ A C+ +D+A +
Sbjct: 442 PNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLK 501
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
NQM P+ +++L+ R+E E L+ +M ++ V PN V N ++
Sbjct: 502 FNQMIN-DGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLC 560
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
G +R++ M E +P+V + NT++ G+ D + + + G+ P+
Sbjct: 561 NEGQVMVAQRLIDSM-ERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDL 619
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+++ L+ Y K D + M + + TY+ +++ + +
Sbjct: 620 ISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLN 679
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G + D T+ ++NG + + + N+ + +I K
Sbjct: 680 MIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGR 739
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
+ ++ + P+ T+ IM + +EG+ D E + L + +E SG
Sbjct: 740 KKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLD-----EFDNLFLAMEKSG 789
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/387 (18%), Positives = 154/387 (39%), Gaps = 44/387 (11%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ +F + + P TY L+ L K G+ + A FN+M+ +G+ P ++ +L
Sbjct: 462 EAMHIFSRMSQHGL-SPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSL 520
Query: 186 LAAYC---RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
+ C R +E F + PN V ++T++ + + + + L M+
Sbjct: 521 VYGLCTVDRWEKAEELFFEMWDQGVRPN----VVFFNTIMCNLCNEGQVMVAQRLIDSME 576
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
V PN ++ N ++GG+ AG D+ ++L M+ S KPD+ + +T+L + G++
Sbjct: 577 RVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMV-SVGLKPDLISYDTLLRGYCKTGRI 635
Query: 303 DMMERWYEKFRNFGIDP-------------ETR----------------------TFNIL 327
D + + G+ P TR T+NI+
Sbjct: 636 DNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNII 695
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
+ K D+ + + + T+ +I+ G K F + + G+
Sbjct: 696 LNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGL 755
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
+ T+C ++ GL + + K + NA+I + + ++M
Sbjct: 756 VPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGA 815
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKE 474
++ E + ++ T S++ +++E
Sbjct: 816 YLSKIDEMNFSLEASTTSLLISLFSRE 842
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 125/335 (37%), Gaps = 43/335 (12%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALL--AAYCRNSLIDEAFVTL-NQM-KTLPN-CQPDVYT 217
A K+F+E++ + + LL A R S E V+L N+M + N +PD+ T
Sbjct: 33 ALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDLCT 92
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
YS L R E + + + N V N +L G A D+ +L +
Sbjct: 93 YSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRM 152
Query: 278 ESATCKPDVWTMNTILSVFANKGQVD-MMERWYEKFRNFG--IDPETRTFNILIGAYGKK 334
C P+V + NT+L N+ +V+ +E + + G P T+N +I K
Sbjct: 153 PEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKA 212
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
+ D+ V+++M TY+ +I+ E + M +G+K D T
Sbjct: 213 QAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVT- 271
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
YN +I KA + E V + M +
Sbjct: 272 ----------------------------------YNTIIDGLCKAQAVDRAEGVLQHMID 297
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
K +PD T++ + + K D+ + Q +
Sbjct: 298 KGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMID 332
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 157/354 (44%), Gaps = 5/354 (1%)
Query: 133 MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRN 192
ML + P +P TY ++ K A++V +M E G EP ++T+LL+ Y
Sbjct: 239 MLTKGP--EPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSK 296
Query: 193 SLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVT 252
+EA+ L +M T C PDV Y++LI R ++ M E+ P+ +T
Sbjct: 297 GRAEEAYQVLTEM-TARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALT 355
Query: 253 QNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF 312
++ + K G + +L M +S PD + N+++ + +VD Y++
Sbjct: 356 YGTIIQNFSKIGNVEAAGEILELMAKSGV-GPDCFAYNSLMDGYVKLERVDQAFGVYDRM 414
Query: 313 RNFGIDPETRTFNILIGAYGKKRMYDKMSSVM-EYMRKLQFPWTSSTYNNVIEAFSDMGD 371
GI P TFN+L+ K D+ S+ E + K + P T +Y +I+ G
Sbjct: 415 VASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGR 474
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNA 431
F++M G+ + T+ LI A AG + V KL + +V Y+A
Sbjct: 475 VSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSA 534
Query: 432 VISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
+I+ I + + V++ M ++ C P+ T+ ++ + G + A++Q
Sbjct: 535 LITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQ 588
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/416 (20%), Positives = 164/416 (39%), Gaps = 70/416 (16%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR--------- 191
+P + L+ K+GQP++ K+ N+ ++ P LYT+++ YC+
Sbjct: 39 EPDVIAFTTLIHGFCKAGQPQVGHKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGYF 97
Query: 192 -----------------------NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
+ IDEA ++KT C P+V Y+ +I + A
Sbjct: 98 RAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKT-AGCSPNVVAYTAVIDGLLKA 156
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
R E +++M S P T +V+ G KA M +V M++ C PD T
Sbjct: 157 GRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKG-CVPDTIT 215
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
T++ F+ ++D + + G +P T+ ++ + K M ++ V+ MR
Sbjct: 216 YTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMR 275
Query: 349 KLQ-----FPWTS------------------------------STYNNVIEAFSDMGDAK 373
+ F +TS Y ++I+ G
Sbjct: 276 ERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVP 335
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
+ F+ M +G D T+ +I ++ G + L +K + + YN+++
Sbjct: 336 EARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLM 395
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+K + + + VY RM +P++ TF+++ K+G D+ ++L +E L+
Sbjct: 396 DGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLE 451
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 141/370 (38%), Gaps = 41/370 (11%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P +Y ++ L + + A K FN M++ G EP +T L+ +C+
Sbjct: 4 EPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHK 63
Query: 201 TLNQM------------------------------KTLPNCQPDVYTYSTLIKACVDAMR 230
LNQ P DV +Y+T+IK D+ R
Sbjct: 64 LLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKR 123
Query: 231 FELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM-----LESATCKPD 285
+ L++++ +PN V V+ G KAG R+ G+ + ++C P
Sbjct: 124 IDEACELFEELKTAGCSPNVVAYTAVIDGLLKAG------RIEDGLKNFEEMSGSSCVPT 177
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
T ++ + + +E+ G P+T T+ LI + K D+ +++
Sbjct: 178 RTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLD 237
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
M T+ TY +++ F + + QM G + F L++ Y + G
Sbjct: 238 VMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKG 297
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ + + A +V Y ++I + E V+ M EK C PD+ T+
Sbjct: 298 RAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYG 357
Query: 466 IMTEAYAKEG 475
+ + ++K G
Sbjct: 358 TIIQNFSKIG 367
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 130/316 (41%), Gaps = 12/316 (3%)
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
G EPT Y +++ +DEA+ N M C+PDV ++TLI A + ++
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMID-NGCEPDVIAFTTLIHGFCKAGQPQV 60
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP--DVWTMNT 291
L +R P+ V+ GY KAG D +G + T K DV + T
Sbjct: 61 GHKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLD------TGYFRAVTPKASLDVISYTT 113
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI-GAYGKKRMYDKMSSVMEYMRKL 350
++ A+ ++D +E+ + G P + +I G R+ D + + E
Sbjct: 114 VIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSS 173
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
P T +TY VI+ FEQM +G DT T+ LI+G++ A +
Sbjct: 174 CVP-TRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEA 232
Query: 411 ISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
+ + Y +++ K D + E + V +M+E+ C P F+ +
Sbjct: 233 RKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSY 292
Query: 471 YAKEGMNDKVYALEQE 486
Y +G ++ Y + E
Sbjct: 293 YLSKGRAEEAYQVLTE 308
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 152/358 (42%), Gaps = 3/358 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F+ + E+ QP TY L+ L + + A+K+ N M+E+G+ P+ Y AL
Sbjct: 327 EALNMFKEMTEK-HCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNAL 385
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ YC+ L A L+ M++ NC P+ TY+ LI +L M ER
Sbjct: 386 IDGYCKKGLSASALEILSLMES-NNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERK 444
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ PN VT NI++ G K G ++LS M ES PD WT + + +G V+
Sbjct: 445 LQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLV-PDEWTYSVFIDTLCKRGLVEEA 503
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+E + GI ++ LI Y K +++ M S TYN++I+
Sbjct: 504 RSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDG 563
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ + K + M ++ T+ LI+ F + +
Sbjct: 564 YCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPD 623
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
V Y A I A L + E + +M K PD+ +++ +AY + G D + +
Sbjct: 624 VFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGI 681
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 156/348 (44%), Gaps = 8/348 (2%)
Query: 144 EGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLN 203
E +Y L+ ++ + + A K+F++M E+ PT YT ++ A C+ EA
Sbjct: 274 EVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFK 333
Query: 204 QMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKA 263
+M T +CQP+V+TY+ LI + + F+ + + M E+ + P+ VT N ++ GY K
Sbjct: 334 EM-TEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKK 392
Query: 264 GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
G+ +LS ++ES C P+ T N ++ F + K + P T
Sbjct: 393 GLSASALEILS-LMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVT 451
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
+NILI K+ ++ M + TY+ I+ G + FE +
Sbjct: 452 YNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLK 511
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA---ENVSFYNAVISACIKAD 440
+G+KA+ + LI+GY G KV L K+ A N YN++I K
Sbjct: 512 EKGIKANEVIYSTLIDGYCKVG---KVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEK 568
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
+ E + M ++ P ++T++I+ + K+ D+ + + + L
Sbjct: 569 NFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQML 616
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 135/329 (41%), Gaps = 2/329 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L++ ++ + A +F M +G YT L+ +C +DEA +QM
Sbjct: 241 TYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQM 300
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
NC P V TY+ +I A R ++++M E+ PN T +++ +
Sbjct: 301 HE-DNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSN 359
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
FD +++L+GMLE P V T N ++ + KG + P RT+N
Sbjct: 360 FDDAKKILNGMLEKGLI-PSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYN 418
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
LI + + + K S++ M + + TYN +I GD M+
Sbjct: 419 ELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNES 478
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G+ D T+ I+ GL + S + I N Y+ +I K + +
Sbjct: 479 GLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDG 538
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
+ +M C P+S T++ + + Y KE
Sbjct: 539 RFLLDKMLSAGCVPNSITYNSLIDGYCKE 567
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 162/386 (41%), Gaps = 17/386 (4%)
Query: 94 LKKKLERKAKAKAWVNTVAETFSDHVLKKQ--WFQALQVFEMLKEQPFYQPKEGTYMKLL 151
L K LERK + N V H K+ A ++ ++ E P E TY +
Sbjct: 437 LHKMLERKLQP----NVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLV-PDEWTYSVFI 491
Query: 152 VLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNC 211
L K G E AR +F + E+GI+ +Y+ L+ YC+ + + L++M + C
Sbjct: 492 DTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLS-AGC 550
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
P+ TY++LI F+ L M +R + P T I++ K FDQ
Sbjct: 551 VPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHD 610
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+ ML + + PDV+ + + + G++ E K GI P+T + + I AY
Sbjct: 611 MFDQMLSTGS-HPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAY 669
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
G+ D +++ M ++ + TY+ +I+ S+ + + + G+ ++
Sbjct: 670 GRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASND 729
Query: 392 KTFCCLINGYA-NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
+ C Y LF K+ ++ A N + Y I+ K L R++
Sbjct: 730 FSNCWRRVDYEFTLDLFGKM-------AEHGCAPNANTYGKFITGLCKVGCLEVAHRLFD 782
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGM 476
MKEK P+ + ++ + + G+
Sbjct: 783 HMKEKGQSPNEDIYNSLLGCSCQLGL 808
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 150/364 (41%), Gaps = 8/364 (2%)
Query: 126 QALQVFEMLKE-----QPF-YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
AL V EML+ F ++ Y LL+LL + + + V+ EM+++ + P
Sbjct: 145 NALFVLEMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNI 204
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
++ YC+ + EA + ++++ D +TY++LI + ++
Sbjct: 205 FTLNTMVNGYCKLGNVVEAELYVSKI-VQAGLSLDTFTYTSLILGYCRNKNVDAANAIFL 263
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
M + N V+ ++ G+ +A D+ ++ S M E C P V T I+
Sbjct: 264 SMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHED-NCWPTVRTYTVIIFALCQL 322
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G+ +++ P T+ +LI + + +D ++ M + + TY
Sbjct: 323 GRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTY 382
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
N +I+ + G + M + + +T+ LI G+ HK +S + +
Sbjct: 383 NALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLE 442
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
++ NV YN +I K DL ++ M E PD T+S+ + K G+ ++
Sbjct: 443 RKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEE 502
Query: 480 VYAL 483
+L
Sbjct: 503 ARSL 506
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/391 (19%), Positives = 134/391 (34%), Gaps = 68/391 (17%)
Query: 76 VSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVA-ETFSDHVLKKQWFQALQVFEML 134
+ T I GY K + + + L++ A N++ + D K++ F+ ++ +
Sbjct: 521 IYSTLIDGY-CKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDI 579
Query: 135 KEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYC---- 190
+ +P TY L+ L K + + A +F++M+ G P +YTA + AYC
Sbjct: 580 MIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGR 639
Query: 191 -------------------------------RNSLIDEAFVTLNQMKTLPNCQPDVYTYS 219
R ID AF L +M + C+P YTYS
Sbjct: 640 LKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEV-GCEPSYYTYS 698
Query: 220 TLIKA-----------------------------CVDAMRFELIETLYQDMDERSVTPNT 250
LIK C + +E L+ M E PN
Sbjct: 699 CLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNA 758
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYE 310
T + G K G + R+ M E P+ N++L G RW +
Sbjct: 759 NTYGKFITGLCKVGCLEVAHRLFDHMKEKGQ-SPNEDIYNSLLGCSCQLGLYGEAIRWLD 817
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
P + +L+ + +K V + ++ + + +I+ G
Sbjct: 818 IMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKG 877
Query: 371 DAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+ F M +G + KT+ LI G+
Sbjct: 878 LSDKCSDLFGIMETQGCQIHPKTYSMLIEGF 908
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 108/267 (40%), Gaps = 4/267 (1%)
Query: 230 RFELIE---TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
RF +I+ ++Y +M + VTPN T N ++ GY K G + E +S ++++ D
Sbjct: 181 RFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGL-SLDT 239
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
+T +++ + VD + N G ++ LI + + R D+ +
Sbjct: 240 FTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQ 299
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M + T TY +I A +G F++M + + + T+ LI
Sbjct: 300 MHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSN 359
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
F + + + +V YNA+I K + M+ +C P++ T++
Sbjct: 360 FDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNE 419
Query: 467 MTEAYAKEGMNDKVYALEQEKLQMLLE 493
+ + + K +L + L+ L+
Sbjct: 420 LILGFCRGKNIHKAMSLLHKMLERKLQ 446
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 1/159 (0%)
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
C P+ TY I E+ L+ M E+ +PN N +LG + G++ +
Sbjct: 754 CAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAI 813
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
R L M+E+ P + + +L ++G + +R + F + + + +LI
Sbjct: 814 RWLDIMIENRH-LPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDG 872
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
KK + DK S + M TY+ +IE F +
Sbjct: 873 LLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGFDGI 911
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 8/165 (4%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY K + L K G E+A ++F+ M E+G P ++Y +LL C+ L EA
Sbjct: 756 PNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRW 815
Query: 202 LNQM---KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
L+ M + LP+ + L+ D E + ++ + + + +++
Sbjct: 816 LDIMIENRHLPHLD----SCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLID 871
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
G K G+ D+ L G++E+ C+ T + ++ F ++D
Sbjct: 872 GLLKKGLSDKCSD-LFGIMETQGCQIHPKTYSMLIEGFDGIQEID 915
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 176/406 (43%), Gaps = 50/406 (12%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE-GIEPTPELYTA 184
++++VF ++K P T+ LL +L K G+ +A+KV++EM+ G+ P +
Sbjct: 167 ESIKVFTIMKSHGV-SPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNI 225
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTY-------------------------- 218
L+ +C N ++D+ F N + C+PDV TY
Sbjct: 226 LIRGFCMNGMVDDGFRIFNDLSRF-GCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKK 284
Query: 219 -----------STLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFD 267
+TLI+ E ++++M + + N +T N ++ G +A F+
Sbjct: 285 SVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFE 344
Query: 268 QMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
+++ +L G T PD T NT++ + G +D + +E+ I P++ T++ L
Sbjct: 345 KIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSAL 404
Query: 328 IGAYGKKRMYDKMSSVMEYM--RKLQFPWTS-----STYNNVIEAFSDMGDAKHMEYTFE 380
+ + + Y+K +++ + RK+ + YN + + + G K E F
Sbjct: 405 VRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFR 464
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
Q+ G + D ++ LI G+ G F + L + + Y ++I+ + D
Sbjct: 465 QLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYESLINGLLHMD 523
Query: 441 D-LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
L+ ++ + K ++ H RP+S TF + ++G + +L Q
Sbjct: 524 KPLLALQSLEKMLRSSH-RPNSSTFHSILAKLLEQGRASESASLIQ 568
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 151/341 (44%), Gaps = 7/341 (2%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA--FVTLNQMKTLPNCQPDVYTYST 220
A + FN E G T + Y ++L RN ++ A F+ + ++ + + +++
Sbjct: 95 ALQFFNWAQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNS 154
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
L++ A F+ ++ M V+P+ VT N +L K G + ++V ML +
Sbjct: 155 LMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTY 214
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
PD +T N ++ F G VD R + FG +P+ T+N L+ +
Sbjct: 215 GVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVA 274
Query: 341 SSVMEYMRKLQFPWTSS--TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+V++ M K + TY +I + + + FE+M +G+KA+ T+ LI
Sbjct: 275 YNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLI 334
Query: 399 NGYANAGLFHKVISSVR-LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
G A F K+ + A + + +N ++ A +L + +V++RM E
Sbjct: 335 KGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKI 394
Query: 458 RPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ--MLLEASG 496
+PDS T+S + + + G +K L + L+ +LL G
Sbjct: 395 QPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDG 435
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 159/361 (44%), Gaps = 3/361 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+ L + E ++ QP P TY L+ K+ E AR++F++M ++G+ P L
Sbjct: 398 EGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTL 457
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C++ I+ A N+M+ + + TY+ LI+A + E L+ +M E
Sbjct: 458 VDGMCKHGRINGAVEFFNEMQG-KGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAG 516
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+P+ + ++ G +AG D+ VLS M E A PD+ + N +++ F K ++D
Sbjct: 517 CSPDAIVYYTLISGLSQAGKLDRASFVLSKMKE-AGFSPDIVSFNVLINGFCRKNKLDEA 575
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++ N GI P+ T+N LI + K + +M+ M K T TY +I A
Sbjct: 576 YEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHA 635
Query: 366 FSDMGDAKHMEYTFEQMHAEG-MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
+ G+ F M + + +T + LIN +S + +
Sbjct: 636 YCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKP 695
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
N + +NA+ + + L + + RM E C PD T I+TE + G K+ +
Sbjct: 696 NTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSFV 755
Query: 485 Q 485
Q
Sbjct: 756 Q 756
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 137/335 (40%), Gaps = 6/335 (1%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL LG++ + + + EM E I+P + L+ C+ +DEA +M
Sbjct: 311 LLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGE 370
Query: 210 N----CQPDVYTYSTLIKACVDAMRFELIETLYQDM-DERSVTPNTVTQNIVLGGYGKAG 264
+ +PDV TY+TLI R E L + M + PNTVT N ++ GY KA
Sbjct: 371 SNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKAS 430
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
M + + M + P+V T+NT++ G+++ ++ + + G+ T+
Sbjct: 431 MIEAARELFDQMNKDGV-PPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTY 489
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
LI A+ +K + + M + + Y +I S G + +M
Sbjct: 490 TALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKE 549
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
G D +F LING+ + ++ I + YN +IS K D
Sbjct: 550 AGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFST 609
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
R+ K+M ++ P T+ + AY G D+
Sbjct: 610 AHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDE 644
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 151/369 (40%), Gaps = 18/369 (4%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLL------GKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
EML+ + + P T + L G++ E + ++ E + P T L
Sbjct: 217 EMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQL 276
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
++ CR+ D A+ L+ + L + + + L+ A A F+ + TL +M E
Sbjct: 277 ISRLCRSGRTDRAWDVLHGLMKLGGVM-EAASCNALLTALGRAREFKRMNTLLAEMKEMD 335
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQ----MERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ PN VT I++ K D+ E++ G +PDV T NT++ G+
Sbjct: 336 IQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGR 395
Query: 302 ----VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+ ++ER + R P T T+N LI Y K M + + + M K P
Sbjct: 396 QEEGLGLVERMRSQPRCM---PNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVV 452
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
T N +++ G F +M +G+K + T+ LI + N K +
Sbjct: 453 TLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEM 512
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
+ + + Y +IS +A L V +MKE PD +F+++ + ++
Sbjct: 513 LEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKL 572
Query: 478 DKVYALEQE 486
D+ Y + +E
Sbjct: 573 DEAYEMLKE 581
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 3/186 (1%)
Query: 129 QVFEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+ +EMLKE +P TY L+ K+G A ++ +MV+EG+ PT Y AL+
Sbjct: 574 EAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALI 633
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
AYC N +DEA M + P+ Y+ LI + + +L +L DM + V
Sbjct: 634 HAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGV 693
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PNT T N + G + + ++ M E A C PD TM + + G+ ++
Sbjct: 694 KPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHA-CNPDYITMEILTEWLSAVGETAKLK 752
Query: 307 RWYEKF 312
+ + +
Sbjct: 753 SFVQGY 758
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 134/350 (38%), Gaps = 37/350 (10%)
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLID---------EAFVTLNQM-----KTLPNCQPD 214
+MV+E EL + + RN LID +A L++M + PN
Sbjct: 173 QMVDESFLVYNELCPSRRLTHIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTG 232
Query: 215 VYTYSTLIK--ACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
+S L K A+ E I L E V PN++ ++ ++G D+ V
Sbjct: 233 HIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDV 292
Query: 273 LSGML------ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
L G++ E+A+C N +L+ + M + + I P TF I
Sbjct: 293 LHGLMKLGGVMEAASC-------NALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGI 345
Query: 327 LIGAYGKKRMYDKMSSVMEYMRK------LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
LI K R D+ V E M L P TYN +I+ +G + E
Sbjct: 346 LINHLCKFRRVDEALEVFEKMNGGESNGFLVEP-DVITYNTLIDGLCKVGRQEEGLGLVE 404
Query: 381 QMHAE-GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
+M ++ +T T+ CLI+GY A + +K + NV N ++ K
Sbjct: 405 RMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKH 464
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ + M+ K + ++ T++ + A+ +K L E L+
Sbjct: 465 GRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLE 514
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 126/311 (40%), Gaps = 26/311 (8%)
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTY--STLIKACVDAMRFE----LIET 236
T L+ + R ++DE+F+ N++ C T+ + LI R + L++
Sbjct: 163 TLLIRCFGRAQMVDESFLVYNEL-----CPSRRLTHIRNILIDVLFRKGRVDDALHLLDE 217
Query: 237 LYQDMDERSVTPNTVTQNIVLGGY------GKAGMFDQMERVLSGMLESATCKPDVWTMN 290
+ Q E PN+ T +IV G+A +++ ++S E +W +
Sbjct: 218 MLQPKAE--FPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIW-LT 274
Query: 291 TILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
++S G+ D G E + N L+ A G+ R + +M++++ M+++
Sbjct: 275 QLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEM 334
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH---AEG--MKADTKTFCCLINGYANAG 405
T+ +I FE+M+ + G ++ D T+ LI+G G
Sbjct: 335 DIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVG 394
Query: 406 LFHKVISSV-RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
+ + V R+ S+ + N YN +I KA + ++ +M + P+ T
Sbjct: 395 RQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTL 454
Query: 465 SIMTEAYAKEG 475
+ + + K G
Sbjct: 455 NTLVDGMCKHG 465
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 150/343 (43%), Gaps = 9/343 (2%)
Query: 141 QPKEGTYMKLLVLLGKSGQ--PELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA 198
+P TY L+ SGQ +A +F+ M +G+ P Y AL+ N ID A
Sbjct: 365 KPNVYTYTSLI-----SGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSA 419
Query: 199 FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
+ N M C P+ +Y+ LI+ E ++ +M + TP VT NI++
Sbjct: 420 LIVFNMMGK-HGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIK 478
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
GY +G D RVL ++++ C+PD W+ ++S F ++++ + + + G+
Sbjct: 479 GYCDSGDTDVAIRVLE-LMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLC 537
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P T+ LI Y K D + ++E M++ TYN +I + + E
Sbjct: 538 PNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEEL 597
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
+ M E + D T+ +ING N G + K N+ Y+++I A +
Sbjct: 598 CKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQ 657
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
+ E E ++ +K++ PD T+ M E G D+ +
Sbjct: 658 EGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAF 700
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 158/380 (41%), Gaps = 62/380 (16%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP Y ++ L K G A + N++ + G++P YT+++ YCRN +D AF
Sbjct: 225 QPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFE 284
Query: 201 TLNQMKTLPNCQPDVYTYSTLIK-----------------------------------AC 225
N+M C+P+ TYSTLI A
Sbjct: 285 IFNRMDE-EGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVAL 343
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKA----GMFDQMERVLSGMLESAT 281
D R E ++ DM ++ PN T ++ G + G+F +M R G++
Sbjct: 344 CDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSR--DGVV---- 397
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
P+ T N +++V ++D + G P T ++N LI Y +K
Sbjct: 398 --PNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAM 455
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
S++ M K + T TYN +I+ + D GD E M A G + D ++ LI+G+
Sbjct: 456 SMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGF 515
Query: 402 ANAGLFHKVISSVRLASKL-------QIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
IS + LAS + + N Y A+IS K + L R+ +RMK
Sbjct: 516 CK-------ISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKR 568
Query: 455 KHCRPDSETFSIMTEAYAKE 474
CRP+ +T++++ K+
Sbjct: 569 SGCRPNVQTYNVLIHGLTKQ 588
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 174/456 (38%), Gaps = 66/456 (14%)
Query: 69 KEGEYPGV-SETS-IPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKK--QW 124
K+G P V + TS I G R R I R ++ NTV +VL + +
Sbjct: 361 KKGCKPNVYTYTSLISGQRVSRMAIG----LFHRMSRDGVVPNTVTYNALMNVLMENMEI 416
Query: 125 FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
AL VF M+ + P +Y +L+ G E A + M++ PT Y
Sbjct: 417 DSALIVFNMMGKHGCL-PNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNI 475
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
++ YC + D A L MK CQPD ++Y+ LI + EL ++ +M +R
Sbjct: 476 IIKGYCDSGDTDVAIRVLELMKA-NGCQPDEWSYTELISGFCKISKMELASGMFNEMMDR 534
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT----------------------- 281
+ PN VT ++ GY K D R+L M S
Sbjct: 535 GLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 594
Query: 282 ---CK--------PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
CK PDV T +T+++ N G + + + K G P T++ LI A
Sbjct: 595 EELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQA 654
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
G++ ++ + ++K TY +IE G +M G +
Sbjct: 655 LGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPT 714
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLAS----------------------KLQIAENVSF 428
+T+ LI G N ++HK+++ AS +L +
Sbjct: 715 LQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQL 774
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
Y+A++S ++ E +Y+ M + P+ +T+
Sbjct: 775 YDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTY 810
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 121/277 (43%), Gaps = 20/277 (7%)
Query: 215 VYTYSTLIKACVDAMRFELIETL---YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
++TY+TL+ + + + T+ Y + + PN + N V+ K G E
Sbjct: 193 LFTYTTLL---IQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAES 249
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI-GA 330
+++ + +S KPD +T +++ + +D + + G +P T++ LI G
Sbjct: 250 IINKVFKSGM-KPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGL 308
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
R+ + + + E R P T T+ I A DMG + F M +G K +
Sbjct: 309 CNSGRVNEALDFISEMTRHGVLP-TVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPN 367
Query: 391 TKTFCCLINGYANA----GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
T+ LI+G + GLFH++ S+ + N YNA+++ ++ ++
Sbjct: 368 VYTYTSLISGQRVSRMAIGLFHRM-------SRDGVVPNTVTYNALMNVLMENMEIDSAL 420
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
V+ M + C P++ +++ + Y G +K ++
Sbjct: 421 IVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSM 457
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 115/286 (40%), Gaps = 30/286 (10%)
Query: 127 ALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
AL++F +M+K P TY L+ LG+ G+ E A ++F+E+ ++G+ P Y +
Sbjct: 629 ALEMFNKMVKHGCL--PNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKM 686
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + +D AF L +M CQP + TY LIK + M + + L +
Sbjct: 687 IEVCVMSGKVDRAFDFLGEMIN-AGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTST 745
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ ++++ VLS L + + +LS + G
Sbjct: 746 FDDQIINKDVI--------------SVLSSKLAELDFELSRQLYDALLSRLSRSG----- 786
Query: 306 ERWYEK---FRNFGID---PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
RW+E +R+ P T+ + + + D V ++M + + Y
Sbjct: 787 -RWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGY 845
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
+I + K + FE+M + + AD + LING AG
Sbjct: 846 KELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAG 891
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 149/361 (41%), Gaps = 4/361 (1%)
Query: 121 KKQWFQALQVFEMLKEQPFYQ--PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPT 178
+K+ +AL++ M+ + + P +Y ++ GQ + +F EM++ GI P
Sbjct: 174 EKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPD 233
Query: 179 PELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
YT ++ C+ L D A QM +P+ YTY+ LI + +++ + +
Sbjct: 234 VVTYTTVIDGLCKAQLFDRAEGVFQQMID-NGFKPNNYTYNCLIHGYLSIGKWKEVVQML 292
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
++M R + P+ T +L K G + M+ KP V T ++ +A
Sbjct: 293 EEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGI-KPKVSTYGILIHGYAT 351
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
KG + M + + G+ P+ FNI AY K M DK + MR+
Sbjct: 352 KGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVN 411
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
Y +I+A +G E F QM EG+ + F L+ G + + V
Sbjct: 412 YGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEML 471
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
I N F+N +I +ME R+ M+ RPD+ +++ + Y G D
Sbjct: 472 DQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTD 531
Query: 479 K 479
+
Sbjct: 532 E 532
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 140/340 (41%), Gaps = 4/340 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ + G E F +++ G LL C + EA
Sbjct: 88 PNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDV 147
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRF-ELIETLYQDMDE--RSVTPNTVTQNIVLG 258
L Q C PD +Y+ L+K + R E +E L+ D+ R PN V+ +IV+
Sbjct: 148 LLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVIN 207
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
G+ G D+ + M++ PDV T T++ D E +++ + G
Sbjct: 208 GFFTEGQVDKPYNLFLEMIDRGI-PPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFK 266
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P T+N LI Y + ++ ++E M TY +++ G + +
Sbjct: 267 PNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFF 326
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
F+ M +G+K T+ LI+GYA G ++ S + L + ++ + +N SA K
Sbjct: 327 FDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAK 386
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ + ++ +M++ P+ + + +A K G D
Sbjct: 387 CGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVD 426
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 127/345 (36%), Gaps = 37/345 (10%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+PK TY L+ G + MVE G+ P ++ +AY + +ID+A
Sbjct: 336 KPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMD 395
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
N+M+ P+V Y LI A R + E + M VTPN V N ++ G
Sbjct: 396 IFNKMRQ-HGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGL 454
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+++ E ++ ML+ C P+ NT++ N G+V R + + G+ P+
Sbjct: 455 CTVDKWERAEELVYEMLDQGIC-PNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPD 513
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
++ LI Y G E F+
Sbjct: 514 AFSYTPLISGY-----------------------------------CLTGRTDEAEKVFD 538
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
M + G+ T+ L++GY +A R + + V YN ++ +
Sbjct: 539 GMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTK 598
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
E + +Y M + D T++I+ K D+ + + Q
Sbjct: 599 RFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQ 643
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 131/326 (40%), Gaps = 44/326 (13%)
Query: 157 SGQPELARKVFNEMVEEG---IEPTPELYTALLAAYCRNSLIDEAFVTLNQ-MKTLPNCQ 212
S ELA FN MV E + P Y+ L+ +CR ++ F +KT +
Sbjct: 65 SSASELAVSHFNRMVRECSDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKT--GWR 122
Query: 213 PDVYTYSTLIKACVDAMRF-ELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
D + L+K R E ++ L Q M E P+TV+ I+L G ++
Sbjct: 123 MDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALE 182
Query: 272 VLSGMLE--SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+L M + C P+V + + +++ F +GQVD + + + GI P+ T+ +I
Sbjct: 183 LLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVID 242
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
K +++D+ V F+QM G K
Sbjct: 243 GLCKAQLFDRAEGV-----------------------------------FQQMIDNGFKP 267
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
+ T+ CLI+GY + G + +V+ + S + + Y ++++ K E +
Sbjct: 268 NNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFF 327
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEG 475
M K +P T+ I+ YA +G
Sbjct: 328 DSMIRKGIKPKVSTYGILIHGYATKG 353
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 97/238 (40%), Gaps = 2/238 (0%)
Query: 134 LKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNS 193
L E +P +Y L+ +G+ + A KVF+ MV G+ PT Y LL YC S
Sbjct: 504 LMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSAS 563
Query: 194 LIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQ 253
ID+A+ +M P V TY+T++ RF + LY +M + T
Sbjct: 564 RIDDAYCLFREMLR-KGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTY 622
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
NI+L G K+ D+ ++ + S + ++ T ++ G+ + +
Sbjct: 623 NIILNGLCKSNCVDEAFKMFQSLC-SKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIP 681
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
G+ P T+ ++ ++ ++ S+ M K S N ++ GD
Sbjct: 682 ANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGD 739
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 128/335 (38%), Gaps = 3/335 (0%)
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
E A ++ EM+++GI P + L+ C + E ++ M+ + +PD ++Y+
Sbjct: 461 ERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHV-GVRPDAFSYTP 519
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
LI R + E ++ M ++P VT N +L GY A D + ML
Sbjct: 520 LISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKG 579
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
P V T NTIL + + Y N G + T+NI++ K D+
Sbjct: 580 V-TPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEA 638
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+ + + T+ +I A G + F + A G+ + T+ +
Sbjct: 639 FKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAEN 698
Query: 401 YANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
G + S K A N NA++ + D+ ++ E++ +
Sbjct: 699 LIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVE 758
Query: 461 SETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
+ T S++ + + +L EK L EA+
Sbjct: 759 ASTTSLLMSIFTSDEYQHHAKSL-PEKYHFLNEAN 792
>gi|414868449|tpg|DAA47006.1| TPA: hypothetical protein ZEAMMB73_127498 [Zea mays]
Length = 870
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 151/341 (44%), Gaps = 9/341 (2%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
LGK G+P+LAR+ F+ + T ++AL++AY R+ L EA L MK +P
Sbjct: 219 LGKMGRPDLARRAFDTGIAGSYGNTVFAHSALISAYARSGLATEAMGVLESMKG-AGLRP 277
Query: 214 DVYTYSTLIKAC----VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+Y+ +I AC VD +RF L ++ M + + P+ T N +L +AG +
Sbjct: 278 TTVSYNAVIDACGKGGVD-LRFTL--GYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDA 334
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
V M+ + + D++T NT + G + + + P T++ L+
Sbjct: 335 RTVFDEMIHLGSGR-DIYTYNTFVDAICKCGNMGLALQVVLDMEANNAKPNVVTYSTLMD 393
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+ K YD+ + E M+ L+ YN ++ + G + E+M G++
Sbjct: 394 GFSKLEKYDEALKLREKMKSLRIQLDRVCYNTLLAIYVKTGKYDEIATVCEEMEKLGIEK 453
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
DT T+ LINGY G V V+ +A +V Y+ +I KA + VY
Sbjct: 454 DTVTYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVY 513
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
KE + D FS + AK G+ + +L E ++M
Sbjct: 514 LDFKESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMMKM 554
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 43/297 (14%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ LL ++G E AR VF+EM+ G
Sbjct: 313 PDRKTFNSLLAACSRAGHLEDARTVFDEMIHLG--------------------------- 345
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
D+YTY+T + A L + DM+ + PN VT + ++ G+
Sbjct: 346 ---------SGRDIYTYNTFVDAICKCGNMGLALQVVLDMEANNAKPNVVTYSTLMDGFS 396
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K +D+ ++ M +S + D NT+L+++ G+ D + E+ GI+ +T
Sbjct: 397 KLEKYDEALKLREKM-KSLRIQLDRVCYNTLLAIYVKTGKYDEIATVCEEMEKLGIEKDT 455
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM---GDAKHMEYT 378
T+N LI YGK+ D ++ +++ MR + TY+ +I+ +S GDA ++
Sbjct: 456 VTYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLD 515
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
F++ G+KAD F I+ A GL +S + K+ I NV YN +I A
Sbjct: 516 FKE---SGLKADVVLFSSFIDTLAKNGLVECALSLLDEMMKMGIKPNVVTYNTIIDA 569
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 124/297 (41%), Gaps = 14/297 (4%)
Query: 114 TFSDHVLK-KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE 172
TF D + K ALQV + E +P TY L+ K + + A K+ +M
Sbjct: 355 TFVDAICKCGNMGLALQVV-LDMEANNAKPNVVTYSTLMDGFSKLEKYDEALKLREKMKS 413
Query: 173 EGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE 232
I+ Y LLA Y + DE +M+ L + D TY++LI R +
Sbjct: 414 LRIQLDRVCYNTLLAIYVKTGKYDEIATVCEEMEKL-GIEKDTVTYNSLINGYGKQGRLD 472
Query: 233 LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTI 292
++ L QDM + V P+ +T + ++ Y KAGM V ES K DV ++
Sbjct: 473 MVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGL-KADVVLFSSF 531
Query: 293 LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF 352
+ A G V+ ++ GI P T+N +I A+GK +++ + S + M +
Sbjct: 532 IDTLAKNGLVECALSLLDEMMKMGIKPNVVTYNTIIDAFGKSKIFTEEDSDIGDMGIVGV 591
Query: 353 --PWTSSTYNNVIEAFSDMGDAK--------HMEYTFEQMHAEGMKADTKTFCCLIN 399
N VI D + + F++M +G++ + TF ++N
Sbjct: 592 YGGQVVRVTNPVIRGGRSATDVRMRRSQELFFILELFQKMVQQGVRPNVVTFSAILN 648
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 85/204 (41%), Gaps = 2/204 (0%)
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
+ + G+ D+ R ++ + LI AY + + + V+E M+
Sbjct: 212 LTAAIGALGKMGRPDLARRAFDTGIAGSYGNTVFAHSALISAYARSGLATEAMGVLESMK 271
Query: 349 KLQFPWTSSTYNNVIEAFSDMG-DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
T+ +YN VI+A G D + F QM +G+ D KTF L+ + AG
Sbjct: 272 GAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHL 331
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ L ++ YN + A K ++ +V M+ + +P+ T+S +
Sbjct: 332 EDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNMGLALQVVLDMEANNAKPNVVTYSTL 391
Query: 468 TEAYAKEGMNDKVYALEQEKLQML 491
+ ++K D+ L +EK++ L
Sbjct: 392 MDGFSKLEKYDEALKL-REKMKSL 414
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 91/213 (42%), Gaps = 12/213 (5%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ GK G+ ++ + +M +G+ P+ Y+ L+ Y + + +AF
Sbjct: 457 TYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDF 516
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
K + DV +S+ I E +L +M + + PN VT N ++ +GK+ +
Sbjct: 517 KE-SGLKADVVLFSSFIDTLAKNGLVECALSLLDEMMKMGIKPNVVTYNTIIDAFGKSKI 575
Query: 266 FDQMER---------VLSGMLESATCKPDVWTMNTILSVFANKGQ-VDMMERWYEKFRNF 315
F + + V G + T P + + V + Q + + ++K
Sbjct: 576 FTEEDSDIGDMGIVGVYGGQVVRVT-NPVIRGGRSATDVRMRRSQELFFILELFQKMVQQ 634
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
G+ P TF+ ++ A + ++ + ++E +R
Sbjct: 635 GVRPNVVTFSAILNACSRCNSFEDAALLLEQLR 667
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 95/239 (39%), Gaps = 8/239 (3%)
Query: 257 LGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG 316
+G GK G D R + + + V+ + ++S +A G E + G
Sbjct: 216 IGALGKMGRPDLARRAFDTGI-AGSYGNTVFAHSALISAYARSGLATEAMGVLESMKGAG 274
Query: 317 IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL---QFPWTSSTYNNVIEAFSDMGDAK 373
+ P T ++N +I A GK + + + Y R++ T+N+++ A S G +
Sbjct: 275 LRPTTVSYNAVIDACGKGGV--DLRFTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLE 332
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
F++M G D T+ ++ G + V NV Y+ ++
Sbjct: 333 DARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNMGLALQVVLDMEANNAKPNVVTYSTLM 392
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL--EQEKLQM 490
K + E ++ ++MK + D ++ + Y K G D++ + E EKL +
Sbjct: 393 DGFSKLEKYDEALKLREKMKSLRIQLDRVCYNTLLAIYVKTGKYDEIATVCEEMEKLGI 451
>gi|19071826|dbj|BAB85657.1| PnC401 homologue [Arabidopsis thaliana]
Length = 831
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 149/332 (44%), Gaps = 2/332 (0%)
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
KL+ L + G+P+ A +FN ++EEG +P+ YT L+ A R +++++
Sbjct: 324 KLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEK- 382
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
+PD ++ +I A ++ + +++ M E P T N ++ GYGK G ++
Sbjct: 383 NGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEE 442
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
R+L ML +P+ T N ++ + N+ +++ K +++G+ P+ TFN L
Sbjct: 443 SSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLA 502
Query: 329 GAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
AY + ++ M + T ++ + + G + F +M G+
Sbjct: 503 KAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGV 562
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
+ F LI G+ N V V L + + +V ++ +++A D+ E
Sbjct: 563 HPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEE 622
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+Y M E PD FSI+ + YA+ G +K
Sbjct: 623 IYTDMLEGGIDPDIHAFSILAKGYARAGEPEK 654
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 177/416 (42%), Gaps = 21/416 (5%)
Query: 58 ESAVAAKKRLWKEGEYPGVSETSIP----------GYRSKRTPIKNLKKKLERKAKAKAW 107
E+ +A + ++K+ E V S P G RT + N + R +A +
Sbjct: 282 EANLADVEAVFKDSEEGRVQLRSFPCVICSGGTTCGDVRSRTKLMNGLIERGRPQEAHSI 341
Query: 108 VNTVAE-----------TFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGK 156
NT+ E T + +++ F +L E+ +P + ++ +
Sbjct: 342 FNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSE 401
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
SG + A K+F +M E G +PT + L+ Y + ++E+ L+ M QP+
Sbjct: 402 SGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDR 461
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
T + L++A + + E + M V P+ VT N + Y + G E ++
Sbjct: 462 TCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPR 521
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
+ KP+V T TI++ + +G+++ R++ + + G+ P FN LI +
Sbjct: 522 MLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIND 581
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
D + V++ M + T++ ++ A+S +GD K E + M G+ D F
Sbjct: 582 MDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSI 641
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
L GYA AG K + K + NV Y +IS A ++ + +VYK+M
Sbjct: 642 LAKGYARAGEPEKAKQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 697
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 59/110 (53%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
++G+PE A+++ N+M + G+ P +YT +++ +C + +A +M + P++
Sbjct: 648 RAGEPEKAKQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNL 707
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
TY TLI +A + E L +DM+ ++V P T ++ G+ G+
Sbjct: 708 TTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGV 757
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 158/367 (43%), Gaps = 12/367 (3%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H K AL+ + + E+ P TY L+ L K+ + + A ++ +EMV+ G+ P
Sbjct: 236 HCRKNDCDGALEFLKEMNERKV-APDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTP 294
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
+ +++ C+ + A L M NC+P TY+TLI + + L
Sbjct: 295 DTVTFNSIMDGLCKAGKFERAHSLLAVMAE-RNCRPSCCTYNTLISGLCKQQNVDRAKDL 353
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
+ P+ VT +I+ G K G D+ ++ M C P++ T NT++
Sbjct: 354 VDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEM-SGKGCTPNLVTYNTLIDGLC 412
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+ + E + G P+ T+ I++ K+ DK ++E M K +
Sbjct: 413 KASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVI 472
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL---FHKVISSV 414
TY ++E G + F++M ++ AD + L+NGY + KV+ +
Sbjct: 473 TYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI 532
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
R + + YNA++ K L E+ V++ M + C P+ +T++I+ + K
Sbjct: 533 RGTPYIDV------YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKH 586
Query: 475 GMNDKVY 481
G D+ +
Sbjct: 587 GKVDEAF 593
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 140/334 (41%), Gaps = 5/334 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L K + A+ + +E V G P Y+ L C+ IDEAF
Sbjct: 328 RPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFE 387
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ +M C P++ TY+TLI A + E L + + P+ VT I++ G
Sbjct: 388 LVKEMSG-KGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGL 446
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G D+ +++ GML+ C P V T ++ G+VD +++ + +
Sbjct: 447 CKEGRLDKALKMVEGMLKRG-CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTAD 505
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+ L+ Y K + V++ +R P+ YN +++ + G + FE
Sbjct: 506 ALAYVSLVNGYCKSSRTKEAQKVVDGIRGT--PYID-VYNALMDGYCKEGRLDEIPNVFE 562
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
M G + KT+ +++G G + + +V YN +I KA
Sbjct: 563 DMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKAS 622
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
E +V +M + PD+ T++ + + KE
Sbjct: 623 KPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKE 656
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 168/401 (41%), Gaps = 19/401 (4%)
Query: 93 NLKKKLERKAKAKAWVNTVAETFSDHVLK--KQWFQALQVFEMLKEQPFYQPKEGTYMK- 149
N++++LE+ W T+ VL+ K A+ F ++ F K T+ +
Sbjct: 79 NIRERLEQ------WRGTLQPAVVSRVLQRLKDPQTAIVFFVWAGDRGF---KHSTFTRN 129
Query: 150 -LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
L L ++G + +F M++ G P Y ++ + C+ + ID+AF L++ K +
Sbjct: 130 CFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAK-V 188
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
+P+V Y+ L +A R + +++++ +P+ + N ++ G+ + D
Sbjct: 189 RGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIP----SPDAIAYNAIIHGHCRKNDCDG 244
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
L M E PDV+T N ++ + D + + G+ P+T TFN ++
Sbjct: 245 ALEFLKEMNERKV-APDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIM 303
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
K +++ S++ M + + TYN +I + + ++ + G
Sbjct: 304 DGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFV 363
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
D T+ L +G G + V+ S N+ YN +I KA + +
Sbjct: 364 PDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYEL 423
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ + PD T++I+ + KEG DK + + L+
Sbjct: 424 LESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLK 464
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 142/353 (40%), Gaps = 18/353 (5%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y P TY ++ L + Q + A + ++ G +P +YT L A+C+ + +A
Sbjct: 156 YAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDA- 214
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKA------CVDAMRFELIETLYQDMDERSVTPNTVTQ 253
L + +P+ PD Y+ +I C A+ F ++M+ER V P+ T
Sbjct: 215 --LEIFRNIPS--PDAIAYNAIIHGHCRKNDCDGALEF------LKEMNERKVAPDVFTY 264
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
NI++ G KA D+ +L M++ PD T N+I+ G+ +
Sbjct: 265 NILIDGLCKASKTDKASEMLHEMVDRGV-TPDTVTFNSIMDGLCKAGKFERAHSLLAVMA 323
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
P T+N LI K++ D+ +++ F TY+ + + G
Sbjct: 324 ERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRID 383
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
++M +G + T+ LI+G A K + +V Y ++
Sbjct: 384 EAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIV 443
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
K L + ++ + M ++ C P T++ + E + G D+ + + +E
Sbjct: 444 DGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKE 496
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/404 (20%), Positives = 153/404 (37%), Gaps = 51/404 (12%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A +V + ++ P+ Y L+ K G+ + VF +M G P + Y +
Sbjct: 524 EAQKVVDGIRGTPYID----VYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIV 579
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY----------------------------- 216
+ C++ +DEAF L M + C PDV
Sbjct: 580 MDGLCKHGKVDEAFPFLESMHS-AGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAG 638
Query: 217 ------TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
TY+TL+ RF+ + ++M + V P+ VT N ++ G +
Sbjct: 639 IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAY 698
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
++ ML + T NTI+ +G + + G++ T T+NI I
Sbjct: 699 ELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDR 758
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA-EGMKA 389
K+ D+ SS++ M L+ +Y VI +M A +G+
Sbjct: 759 LCKEGRLDEASSLLSEMDTLR---DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCI 815
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
+ TF LI+ + + ++ + L + + +V YN VI+ K D + + ++
Sbjct: 816 TSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELF 875
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
M + S +++++ +G +E LQ+L E
Sbjct: 876 DEMAVRGIVASSVSYTVLIYGLCGQGRG-------KEALQVLEE 912
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 3/143 (2%)
Query: 144 EGTYMKLLVLLGKSGQPELARKVFNEMVE-EGIEPTPELYTALLAAYCRNSLIDEAFVTL 202
E +Y +++ L K+ Q + A K+ EMV +G+ T + L+ A+ + +DEA L
Sbjct: 781 EVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLL 840
Query: 203 NQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGK 262
M C P V TY+ +I + + L+ +M R + ++V+ +++ G
Sbjct: 841 GLM-VQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCG 899
Query: 263 AGMFDQMERVLSGMLESATCKPD 285
G + +VL M S+ C+ D
Sbjct: 900 QGRGKEALQVLEEM-ASSDCEID 921
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 133/295 (45%), Gaps = 6/295 (2%)
Query: 114 TFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPE---LARKVFNEM 170
+ + +V+ KQ Q+F +K F +P T LL L +S +R+VF +
Sbjct: 144 SLAAYVISKQPHLGHQIFNKMKRLRF-RPNLLTCNTLLNALVRSNSSHSLVFSREVFQDA 202
Query: 171 VEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMR 230
V+ G++P + L+ YC ++ +EA +NQM C PD TY+T++ A +
Sbjct: 203 VKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEY-GCCPDNVTYNTVLTALCKRSQ 261
Query: 231 FELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMN 290
+ L M + PN T NI++ GY K + V+ M PDVWT N
Sbjct: 262 LTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGML-PDVWTYN 320
Query: 291 TILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
T++ ++G++D R +K +F + P+ T+N LI + R D ++E M+
Sbjct: 321 TMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKAR 380
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
T+N +I+ F G +M G D T+ +INGY AG
Sbjct: 381 GVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAG 435
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 115/498 (23%), Positives = 197/498 (39%), Gaps = 22/498 (4%)
Query: 5 SASASLSFSSSLLPSPL-------------PHPHDTKTNKHRAQVPNFNLIHCSVTSTNK 51
S A L S +P PL PH NK + NL+ C+
Sbjct: 124 SLHAHLLRSDHTIPKPLLDTSLAAYVISKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNAL 183
Query: 52 HTSFSSESAVAAKKRLW---KEGEYPGVSETSI--PGYRSKRTPIKNLKKKLERKAKAKA 106
S SS S V +++ K G P V+ +I GY S + L+ +
Sbjct: 184 VRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCC 243
Query: 107 WVNTVAETFSDHVLKK-QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARK 165
N T + K+ Q Q + +K + P TY L+ K + A +
Sbjct: 244 PDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLF-PNRNTYNILVHGYCKLKWLKEAAE 302
Query: 166 VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC 225
V M +G+ P Y ++ C IDEA ++M++ PDV TY+TLI C
Sbjct: 303 VIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESF-KLVPDVVTYNTLIDGC 361
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
+ + L ++M R V N VT NI++ + G D+ V+ M+ES PD
Sbjct: 362 FEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGF-SPD 420
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
+T NT+++ + G++ + ++ G+ +T T N L+ ++ D ++
Sbjct: 421 CFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTM 480
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
RK + TY +I + A +E+M G+ A T+ +I G +G
Sbjct: 481 KARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSG 540
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ + + + + + S N +I + + + + +M E +PD T +
Sbjct: 541 KTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCN 600
Query: 466 IMTEAYAKEGMNDKVYAL 483
I+ +EGM +K L
Sbjct: 601 ILLRGLCREGMLEKGLTL 618
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 97/212 (45%), Gaps = 4/212 (1%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQD 240
Y L+ Y ++ D A +MK + TY+T+I+ C+ + ++ L +
Sbjct: 494 YGTLIMGYFKDEQADRALKLWEEMKE-TGIVATIITYNTIIRGLCLSGKTDQAVDKL-NE 551
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
+ E+ + P+ T NI++ GY G ++ + + M+E + KPD++T N +L +G
Sbjct: 552 LLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSL-KPDIFTCNILLRGLCREG 610
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
++ + + + G +T T+NI+I ++ K+R + +M M TYN
Sbjct: 611 MLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYN 670
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
++ + G + E + +G + T+
Sbjct: 671 AIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQ 702
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 87/201 (43%), Gaps = 13/201 (6%)
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP-DVY 216
G E A + N+MVE ++P LL CR ++++ N + +P D
Sbjct: 575 GAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTW--ISKGKPMDTV 632
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
TY+ +I + R E L +M+ +++ P+ T N ++ G KAG ++ E++
Sbjct: 633 TYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKF 692
Query: 277 LE------SATCKPDVWTMNTI----LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
E + P++ T + + +S +G+ + +++ G+ T+
Sbjct: 693 AEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIK 752
Query: 327 LIGAYGKKRMYDKMSSVMEYM 347
L+ K+R +S++ +M
Sbjct: 753 LMDGLLKRRKSFTTTSLLPFM 773
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL L + G E +FN + +G Y +++++C+ +++AF + +M+
Sbjct: 602 LLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEG-K 660
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETL 237
N +PD YTY+ ++ A R E E L
Sbjct: 661 NLEPDRYTYNAIVTGLTKAGRTEEAEKL 688
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 161/385 (41%), Gaps = 36/385 (9%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H + +AL +F+ +K+ +P TY LL+ K G + A K+++EM EG +P
Sbjct: 411 HCQAHKLREALNLFDRMKKAGV-KPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKP 469
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMK------------TLPN--------CQ----- 212
Y L+ Y D A+ L++MK L N C+
Sbjct: 470 NVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGML 529
Query: 213 ---------PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKA 263
P + TY+++I V A T+YQ M E+ + PN +T + GY +
Sbjct: 530 KSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRT 589
Query: 264 GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
G D ++L+ + +PD+ N +++ F +G + + G+ P T
Sbjct: 590 GCSDMALKMLNDVRRRGL-QPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVV 648
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
+N LI Y M ++S E M K +STY +I+ FS G+ + +M
Sbjct: 649 YNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMM 708
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
A+G D TF L +G +G + +L + NV YN +I+ ++ L
Sbjct: 709 AKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQ 768
Query: 444 EMERVYKRMKEKHCRPDSETFSIMT 468
E R++ M +PD T+ I+
Sbjct: 769 EAFRLHDEMLNMGIQPDDTTYDILV 793
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 161/368 (43%), Gaps = 10/368 (2%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
++W A+ +FE + + P TY L+ ++ + A +F+ M + G++P+
Sbjct: 381 RRWKDAVCLFEEMADSGL--PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINT 438
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y +LL YC+ +DEA ++M + +P+V TY TL++ + F+ L +M
Sbjct: 439 YNSLLMGYCKKGCMDEAVKLYSEMP-MEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEM 497
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK---PDVWTMNTILSVFAN 298
+ V+ N T N+++ G M D++ V GML+S + P + T N+I++ F
Sbjct: 498 KQNGVSCNDYTYNVLINGIC---MVDRVCEV-DGMLKSFMSEGFIPTMMTYNSIINGFVK 553
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
G + Y++ R G+ P T+ I Y + D ++ +R+
Sbjct: 554 AGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVA 613
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN +I F G+ H + +G+ +T + LI GY N + +V
Sbjct: 614 YNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMI 673
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
K I + S Y +I K ++ +Y M K PD+ TF+ +T + G D
Sbjct: 674 KGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDID 733
Query: 479 KVYALEQE 486
L +E
Sbjct: 734 GAKKLLEE 741
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 152/355 (42%), Gaps = 8/355 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL++ +KE F + TY ++ +L K+G+ E A +V +EM + G + + T L
Sbjct: 245 RALRMLREMKEVGF-DTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTL 303
Query: 186 LAAYCRNSLIDEAFVTLNQMK-TLPN-CQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
+ YC + A LN K TL + P Y LI+ C + L + M
Sbjct: 304 MRGYCLRQEVGNA---LNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTG 360
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+ + P+T ++VL G + + M +S PDV+T N ++ ++
Sbjct: 361 QGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL--PDVFTYNNLIHWHCQAHKLR 418
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+++ + G+ P T+N L+ Y KK D+ + M F TY ++
Sbjct: 419 EALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLM 478
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
+ D + ++M G+ + T+ LING +V ++
Sbjct: 479 RGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFI 538
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ YN++I+ +KA + VY++M+EK P+ T++ + Y + G +D
Sbjct: 539 PTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSD 593
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/154 (18%), Positives = 58/154 (37%)
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
+ D W + ++S +G + R +++ IDP+ R + + I A K +
Sbjct: 189 RVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALR 248
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
++ M+++ F TY +++ G + ++M G K D L+ GY
Sbjct: 249 MLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYC 308
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
++ + K I Y +I C
Sbjct: 309 LRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGC 342
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 151/336 (44%), Gaps = 8/336 (2%)
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
+G E+ + F EM P Y ++ AYC+ IDEAF L M L +P++
Sbjct: 216 AGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMG-LEGLEPNLL 274
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
TY+ +I R E + +MD + P+ VT N ++ GY K G F Q + S M
Sbjct: 275 TYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEM 334
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
L + PDV T ++++ G ++ ++++ G+ P T+ LI + +K
Sbjct: 335 LRNGL-PPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGF 393
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
D+ + + M + FP T TYN ++ G + M +G+ D ++
Sbjct: 394 MDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYST 453
Query: 397 LINGYANAGLFHKVISSVRLASKL---QIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+I G+ + ++ + ++ +++ ++ + Y+++I + L E +++ M
Sbjct: 454 IIAGFCR---YQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEML 510
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
K PD T++ + Y KEG ++ L E ++
Sbjct: 511 NKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIK 546
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 156/365 (42%), Gaps = 4/365 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPEL-ARKVFNEMVEEGIEPTPELYTA 184
+AL + ++ K F P +Y +L + + +P + A KV+ EM+ G+ Y
Sbjct: 150 KALNIVDLAKLNGF-MPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNI 208
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ +C ++ +M+ C P+V TY+T+I A R + L + M
Sbjct: 209 LIRGFCAAGNLEMGLRFFEEMER-NRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLE 267
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ PN +T N+V+ G + G ++ VL+ M + PD T NT+++ + G
Sbjct: 268 GLEPNLLTYNMVINGLCRVGRIEETSGVLAEM-DRKGFAPDGVTYNTLVNGYCKVGNFHQ 326
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ + G+ P+ T+ LI K ++ + M TY ++I
Sbjct: 327 ALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLIN 386
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
FS G +++M G T+ L+NG+ +G + I +R ++
Sbjct: 387 GFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSP 446
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
+V Y+ +I+ + +L ++ M EK PD+ T+S + + ++ ++ L
Sbjct: 447 DVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLF 506
Query: 485 QEKLQ 489
QE L
Sbjct: 507 QEMLN 511
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 169/368 (45%), Gaps = 31/368 (8%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A++ F+ + + +P TY L+ + G + A ++++EM+ G PT Y AL
Sbjct: 361 RAMEFFDQMHVRGL-RPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNAL 419
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ---DMD 242
L +C + ++EA L M+ PDV +YST+I R++ ++ +Q +M
Sbjct: 420 LNGHCVSGRMEEAIGLLRGMEG-KGLSPDVVSYSTIIAGFC---RYQELDRAFQMNAEMV 475
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
E+ V+P+ +T + ++ G + ++ + ML + PD +T ++++ + +G +
Sbjct: 476 EKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLL-PDEFTYTSLINGYCKEGDL 534
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ +++ G P+T T+N+LI K+ R + +++ P TY+
Sbjct: 535 NEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIP-NGITYDT 593
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+IE+ SD+ + K+ LI G+ GL ++ K
Sbjct: 594 LIESCSDI--------------------EFKSVVALIKGFCMKGLMNEADQVFESMIKRN 633
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
N + YN +I + ++ + ++YK M + P + T + +A EGM++++
Sbjct: 634 QKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLN 693
Query: 482 ALEQEKLQ 489
+ ++ L+
Sbjct: 694 LVIRDILR 701
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 169/414 (40%), Gaps = 62/414 (14%)
Query: 129 QVFEMLKEQPF--YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+ F++L+ +P TY ++ L + G+ E V EM +G P Y L+
Sbjct: 256 EAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLV 315
Query: 187 AAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
YC+ +A V ++M LP PDV TY++LI A + M R
Sbjct: 316 NGYCKVGNFHQALVLHSEMLRNGLP---PDVVTYTSLINTMCKAGNLNRAMEFFDQMHVR 372
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERV------------------------LSGMLESA 280
+ PN VT ++ G+ + G D+ R+ +SG +E A
Sbjct: 373 GLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEA 432
Query: 281 T----------CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
PDV + +TI++ F ++D + + G+ P+ T++ LI
Sbjct: 433 IGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQG 492
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
++R ++ + + M TY ++I + GD ++M +G D
Sbjct: 493 LCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPD 552
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVS---FYNAVISAC----------- 436
T T+ LING + + RL KL E++ Y+ +I +C
Sbjct: 553 TVTYNVLINGLNKQA---RTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVAL 609
Query: 437 IKA---DDLM-EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
IK LM E ++V++ M +++ +P+ ++++ + ++G K + L +E
Sbjct: 610 IKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKE 663
>gi|29294052|gb|AAO73889.1| protein kinase family [Arabidopsis thaliana]
Length = 854
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 149/332 (44%), Gaps = 2/332 (0%)
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
KL+ L + G+P+ A +FN ++EEG +P+ YT L+ A R +++++
Sbjct: 347 KLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEK- 405
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
+PD ++ +I A ++ + +++ M E P T N ++ GYGK G ++
Sbjct: 406 NGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEE 465
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
R+L ML +P+ T N ++ + N+ +++ K +++G+ P+ TFN L
Sbjct: 466 SSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLA 525
Query: 329 GAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
AY + ++ M + T ++ + + G + F +M G+
Sbjct: 526 KAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGV 585
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
+ F LI G+ N V V L + + +V ++ +++A D+ E
Sbjct: 586 HPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEE 645
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+Y M E PD FSI+ + YA+ G +K
Sbjct: 646 IYTDMLEGGIDPDIHAFSILAKGYARAGEPEK 677
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 177/416 (42%), Gaps = 21/416 (5%)
Query: 58 ESAVAAKKRLWKEGEYPGVSETSIP----------GYRSKRTPIKNLKKKLERKAKAKAW 107
E+ +A + ++K+ E V S P G RT + N + R +A +
Sbjct: 305 EANLADVEAVFKDSEEGRVQLRSFPCVICSGGTTCGDVRSRTKLMNGLIERGRPQEAHSI 364
Query: 108 VNTVAE-----------TFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGK 156
NT+ E T + +++ F +L E+ +P + ++ +
Sbjct: 365 FNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSE 424
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
SG + A K+F +M E G +PT + L+ Y + ++E+ L+ M QP+
Sbjct: 425 SGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDR 484
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
T + L++A + + E + M V P+ VT N + Y + G E ++
Sbjct: 485 TCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPR 544
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
+ KP+V T TI++ + +G+++ R++ + + G+ P FN LI +
Sbjct: 545 MLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIND 604
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
D + V++ M + T++ ++ A+S +GD K E + M G+ D F
Sbjct: 605 MDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSI 664
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
L GYA AG K + K + NV Y +IS A ++ + +VYK+M
Sbjct: 665 LAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 720
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 58/110 (52%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
++G+PE A ++ N+M + G+ P +YT +++ +C + +A +M + P++
Sbjct: 671 RAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNL 730
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
TY TLI +A + E L +DM+ ++V P T ++ G+ G+
Sbjct: 731 TTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGV 780
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 85/229 (37%), Gaps = 2/229 (0%)
Query: 103 KAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPEL 162
K K V T + + + + +AL+ F +KE + P + L+ +
Sbjct: 549 KVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVH-PNLFVFNSLIKGFLNINDMDG 607
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
+V + M E G++P ++ L+ A+ + M PD++ +S L
Sbjct: 608 VGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLE-GGIDPDIHAFSILA 666
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
K A E E + M + V PN V ++ G+ AG + +V M
Sbjct: 667 KGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGL 726
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
P++ T T++ F Q E + + P +T ++ +
Sbjct: 727 SPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGW 775
>gi|42570531|ref|NP_850859.2| SNF1-like protein kinase [Arabidopsis thaliana]
gi|75160582|sp|Q8S9D1.1|PP395_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g21222; AltName: Full=SNF1-like protein kinase AtC401
gi|19071860|dbj|BAB85674.1| SNF1-like protein kinase [Arabidopsis thaliana]
gi|332005563|gb|AED92946.1| SNF1-like protein kinase [Arabidopsis thaliana]
Length = 831
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 149/332 (44%), Gaps = 2/332 (0%)
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
KL+ L + G+P+ A +FN ++EEG +P+ YT L+ A R +++++
Sbjct: 324 KLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEK- 382
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
+PD ++ +I A ++ + +++ M E P T N ++ GYGK G ++
Sbjct: 383 NGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEE 442
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
R+L ML +P+ T N ++ + N+ +++ K +++G+ P+ TFN L
Sbjct: 443 SSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLA 502
Query: 329 GAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
AY + ++ M + T ++ + + G + F +M G+
Sbjct: 503 KAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGV 562
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
+ F LI G+ N V V L + + +V ++ +++A D+ E
Sbjct: 563 HPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEE 622
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+Y M E PD FSI+ + YA+ G +K
Sbjct: 623 IYTDMLEGGIDPDIHAFSILAKGYARAGEPEK 654
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 177/416 (42%), Gaps = 21/416 (5%)
Query: 58 ESAVAAKKRLWKEGEYPGVSETSIP----------GYRSKRTPIKNLKKKLERKAKAKAW 107
E+ +A + ++K+ E V S P G RT + N + R +A +
Sbjct: 282 EANLADVEAVFKDSEEGRVQLRSFPCVICSGGTTCGDVRSRTKLMNGLIERGRPQEAHSI 341
Query: 108 VNTVAE-----------TFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGK 156
NT+ E T + +++ F +L E+ +P + ++ +
Sbjct: 342 FNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSE 401
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
SG + A K+F +M E G +PT + L+ Y + ++E+ L+ M QP+
Sbjct: 402 SGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDR 461
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
T + L++A + + E + M V P+ VT N + Y + G E ++
Sbjct: 462 TCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPR 521
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
+ KP+V T TI++ + +G+++ R++ + + G+ P FN LI +
Sbjct: 522 MLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIND 581
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
D + V++ M + T++ ++ A+S +GD K E + M G+ D F
Sbjct: 582 MDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSI 641
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
L GYA AG K + K + NV Y +IS A ++ + +VYK+M
Sbjct: 642 LAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 697
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 58/110 (52%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
++G+PE A ++ N+M + G+ P +YT +++ +C + +A +M + P++
Sbjct: 648 RAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNL 707
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
TY TLI +A + E L +DM+ ++V P T ++ G+ G+
Sbjct: 708 TTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGV 757
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 85/229 (37%), Gaps = 2/229 (0%)
Query: 103 KAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPEL 162
K K V T + + + + +AL+ F +KE + P + L+ +
Sbjct: 526 KVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVH-PNLFVFNSLIKGFLNINDMDG 584
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
+V + M E G++P ++ L+ A+ + M PD++ +S L
Sbjct: 585 VGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLE-GGIDPDIHAFSILA 643
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
K A E E + M + V PN V ++ G+ AG + +V M
Sbjct: 644 KGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGL 703
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
P++ T T++ F Q E + + P +T ++ +
Sbjct: 704 SPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGW 752
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 182/441 (41%), Gaps = 20/441 (4%)
Query: 47 TSTNKHTSFSSESAVAAKKRLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKA 106
T T F E ++ A RL G S TS+ + N KL R A
Sbjct: 233 TFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSV-----TVNVLINGYCKLGRVGDALG 287
Query: 107 WVNT-VAETFSDHVLKKQWF-----------QALQVFEMLKEQPFYQPKEGTYMKLLVLL 154
++ +A+ F + F AL+V ++ ++ +P TY ++ L
Sbjct: 288 YIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEG-CEPDVYTYSTVINCL 346
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
+G+ E A+ + N+MV+ G P + L+ A C + ++EA + L + T+ P+
Sbjct: 347 CNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEA-LDLARELTVKGLSPN 405
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
VYT++ LI A L L+++M TP+ VT NI++ +G + +L
Sbjct: 406 VYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLK 465
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
M E + C T NTI+ + +++ E +++ GI TFN LI
Sbjct: 466 EM-EVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNA 524
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
D + +++ M + TYN+++ + G+ + M A G + D T+
Sbjct: 525 ERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTY 584
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
LING A + +R + YN VI + + ++ + +++ M E
Sbjct: 585 ATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTE 644
Query: 455 KHCRPDSETFSIMTEAYAKEG 475
PD+ T+ I+ + G
Sbjct: 645 VGGPPDAFTYKIVFRGLCRGG 665
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 162/384 (42%), Gaps = 44/384 (11%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
Q Y LL +L + + +L + EM +GIEP + ++ A CR A +
Sbjct: 158 QANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVL 217
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +M + + PD T++TL++ V+ E L M E +P +VT N+++ GY
Sbjct: 218 MLEEMSSC-DVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGY 276
Query: 261 GKAGM-----------------------------------FDQMERVLSGMLESATCKPD 285
K G D +VL ML+ C+PD
Sbjct: 277 CKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEG-CEPD 335
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
V+T +T+++ N G+++ + + + G P+T TFN LI A + +++ ++
Sbjct: 336 VYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTE---NQLEEALD 392
Query: 346 YMRKLQFPWTSS---TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
R+L S T+N +I A +GD FE+M + G D T+ LI+
Sbjct: 393 LARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLC 452
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
++G K + ++ ++ YN +I K + E E V+ +M ++
Sbjct: 453 SSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAI 512
Query: 463 TFSIMTEAYAK-EGMNDKVYALEQ 485
TF+ + + E ++D ++Q
Sbjct: 513 TFNTLIDGLCNAERIDDAAELVDQ 536
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 163/400 (40%), Gaps = 49/400 (12%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P Y +++ LG +G +L + + EM EG E L + + +Y R L D+AF
Sbjct: 88 PSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAFDL 147
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
++ + Q + Y+ L+ + + +L+E+ Y +M + + P+ VT N V+
Sbjct: 148 VSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALC 207
Query: 262 KAGMFDQMERVLSGMLE---SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
+A + R MLE S PD T T++ F +G ++ R + G
Sbjct: 208 RA----RQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCS 263
Query: 319 PETRTFNILIGAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P + T N+LI Y K R+ D + + + + F T++ + G H
Sbjct: 264 PTSVTVNVLINGYCKLGRVGDALGYIQQEIAD-GFEPDRVTFSTFVNGLCQNGHVDHALK 322
Query: 378 TFEQMHAEGMKADTKTFCCLINGYAN-------AGLFHKVISS-------------VRLA 417
M EG + D T+ +IN N G+ ++++ S V L
Sbjct: 323 VLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALC 382
Query: 418 SKLQIAE---------------NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
++ Q+ E NV +N +I+A K D R+++ MK C PD
Sbjct: 383 TENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEV 442
Query: 463 TFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGHWQQNI 502
T++I+ + G K L +E +E SG Q +
Sbjct: 443 TYNILIDNLCSSGKLAKALDLLKE-----MEVSGCPQSTV 477
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 71/206 (34%), Gaps = 41/206 (19%)
Query: 276 MLESATCKPDVWT-----MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
ML SA + D T I+ G D+M+ + R G + IG+
Sbjct: 75 MLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGS 134
Query: 331 YGKKRMYDK-MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
Y + +++D V + + YN+++ ++ K +E + +M ++G++
Sbjct: 135 YARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEP 194
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
D TF N VI A +A +
Sbjct: 195 DVVTF-----------------------------------NTVIDALCRARQARTAVLML 219
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEG 475
+ M PD TF+ + E + +EG
Sbjct: 220 EEMSSCDVAPDETTFTTLMEGFVEEG 245
>gi|224133318|ref|XP_002321537.1| predicted protein [Populus trichocarpa]
gi|222868533|gb|EEF05664.1| predicted protein [Populus trichocarpa]
Length = 834
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 154/337 (45%), Gaps = 8/337 (2%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
N V + DH + AL F LK+ P ++ TY ++ +LG++ Q K+ +
Sbjct: 309 NQVLKQLQDHTV------ALGFFHWLKQLPGFKHDGYTYTTMVGILGRAKQFVAINKLLD 362
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
+MV +G +PT Y L+ +Y R + +++A NQM+ C+PD TY TLI A
Sbjct: 363 QMVRDGCQPTVVTYNRLIHSYGRANYLNDAVEVFNQMQK-AGCEPDRVTYCTLIDIHAKA 421
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
+YQ M ++P+T T ++++ GKAG +++ M+E C P++ T
Sbjct: 422 GFLNFAMEMYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQG-CVPNLVT 480
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
N ++++ A + Y +N G +P+ T++I++ G D+ ++ M+
Sbjct: 481 YNIMIALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMK 540
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
+ + Y +++ + G+ + ++ M G+ + T L++ +
Sbjct: 541 RKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPTCNSLLSAFLRVNRLP 600
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
+ ++ L + ++ Y ++S C +A +M
Sbjct: 601 DAYNLLQSMLNLGLNPSLQTYTLLLSCCTEARSPYDM 637
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 107/515 (20%), Positives = 199/515 (38%), Gaps = 69/515 (13%)
Query: 8 ASLSFSSSLLPSPLPHPHDTKTNKHRAQVPNFNLIHCSVTSTNKHTSFSSESAVAAKKRL 67
A++SF S L+ LP T N + I+C + T + ++ S + ++
Sbjct: 124 AAVSFLSDLVNYKLPTSDGTVIN---------STINCMIDPTRQLSNIKSSNVKPIRREN 174
Query: 68 WKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAW--VNTVA--ETFSDHVLKKQ 123
+ + YP S IP + ++K + + + + + V+++A + H L
Sbjct: 175 FTKA-YPN-SSAEIPVGSNAAVNYNSMKDRGNKSSFVRGFKQVSSIAADSSLDSHSLPSD 232
Query: 124 WFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP---TP 179
F + + LK QP +P T M +V +S + ++ E V + + P
Sbjct: 233 AFDKRRTIPQRLKAQPNRRPSRDTKMPAVV--ARSARQFVSTGHVVENVSQILRQLRWGP 290
Query: 180 ELYTAL------LAAYCRNSLIDE------AFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
AL + AY N ++ + A + +K LP + D YTY+T++
Sbjct: 291 SAEEALVNLNCHMDAYQANQVLKQLQDHTVALGFFHWLKQLPGFKHDGYTYTTMVGILGR 350
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
A +F I L M P VT N ++ YG+A + V + M + A C+PD
Sbjct: 351 AKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDAVEVFNQM-QKAGCEPDRV 409
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPET-------------------------- 321
T T++ + A G ++ Y++ + G+ P+T
Sbjct: 410 TYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEM 469
Query: 322 ---------RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
T+NI+I K R Y + M+ F TY+ V+E G
Sbjct: 470 IEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYL 529
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAV 432
E F +M + D + L++ + AG K + + NV N++
Sbjct: 530 DEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPTCNSL 589
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+SA ++ + L + + + M P +T++++
Sbjct: 590 LSAFLRVNRLPDAYNLLQSMLNLGLNPSLQTYTLL 624
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 111/284 (39%), Gaps = 37/284 (13%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY +L+ G++ A +VFN+M + G EP Y L+ + + ++ A
Sbjct: 370 QPTVVTYNRLIHSYGRANYLNDAVEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAME 429
Query: 201 TLNQMKTLPNCQPDVYTYSTLIK--------ACVDAMRFELIET---------------- 236
+M+ PD +TYS +I A D + E+IE
Sbjct: 430 MYQRMQA-AGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQ 488
Query: 237 -----------LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
LY+DM P+ VT +IV+ G +G D+ E + S M + PD
Sbjct: 489 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEM-KRKNWVPD 547
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
++ ++ G V+ WY+ + G+ P T N L+ A+ + ++++
Sbjct: 548 EPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPTCNSLLSAFLRVNRLPDAYNLLQ 607
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
M L + TY ++ ++ M E M G A
Sbjct: 608 SMLNLGLNPSLQTYTLLLSCCTEARSPYDMGCYCELMSVTGHPA 651
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 85/197 (43%), Gaps = 2/197 (1%)
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
L + C D + N +L + W ++ F D T+ ++G G+ +
Sbjct: 296 LVNLNCHMDAYQANQVLKQLQDHTVALGFFHWLKQLPGFKHD--GYTYTTMVGILGRAKQ 353
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
+ ++ +++ M + T TYN +I ++ F QM G + D T+C
Sbjct: 354 FVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDAVEVFNQMQKAGCEPDRVTYCT 413
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
LI+ +A AG + + + ++ + Y+ +I+ KA L ++++ M E+
Sbjct: 414 LIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQG 473
Query: 457 CRPDSETFSIMTEAYAK 473
C P+ T++IM AK
Sbjct: 474 CVPNLVTYNIMIALQAK 490
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 152/352 (43%), Gaps = 3/352 (0%)
Query: 125 FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+ + +F ++E+ +P TY ++ + K + + +R++ NEM+E+G+ P+ Y A
Sbjct: 336 LEGMDLFNEMRERSC-EPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNA 394
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ YC I+ A L M++ NC+P+ TY+ LI TL M E
Sbjct: 395 LIRGYCEEGRIEAALEILGLMES-NNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLES 453
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+TP+ VT N ++ KAG FD ++L + E+ PD WT + + +++
Sbjct: 454 KLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLV-PDQWTYSVFIDTLCKSKRMEE 512
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ + GI + LI + K D+ S++E M SSTYN++I
Sbjct: 513 ACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIY 572
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
G + E M G+K T+ LI G F
Sbjct: 573 GVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKP 632
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+V Y A I + ++ E E + RM E PDS T++++ AY + G+
Sbjct: 633 DVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGL 684
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 150/350 (42%), Gaps = 3/350 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+ + +F+ ++E Y P TY ++ L + + +FNEM E EP YT +
Sbjct: 302 EGISLFKKMREDDCY-PTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVM 360
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A C+ +DE+ LN+M P V TY+ LI+ + R E + M+ +
Sbjct: 361 VDAMCKERKLDESRRILNEMME-KGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNN 419
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN T N ++ G+ K + +LS MLES P + T N+++ V G D
Sbjct: 420 CRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKL-TPSLVTYNSLIHVQCKAGHFDSA 478
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ + + G+ P+ T+++ I K + ++ + +++ Y +I+
Sbjct: 479 YKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDG 538
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
G E+MH+E ++ T+ LI G G + +S V SK+ +
Sbjct: 539 HCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPT 598
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
V+ Y +I ++ D RV+ +M +PD T++ Y G
Sbjct: 599 VATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSG 648
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 139/339 (41%), Gaps = 2/339 (0%)
Query: 137 QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLID 196
Q P TY L++ ++ A KVFN M +G YT ++ C ID
Sbjct: 242 QAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRID 301
Query: 197 EAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIV 256
E +M+ +C P V TY+ +I A R L+ +M ERS PN T ++
Sbjct: 302 EGISLFKKMRE-DDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVM 360
Query: 257 LGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG 316
+ K D+ R+L+ M+E P V T N ++ + +G+++ +
Sbjct: 361 VDAMCKERKLDESRRILNEMMEKGLV-PSVVTYNALIRGYCEEGRIEAALEILGLMESNN 419
Query: 317 IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME 376
P RT+N LI + K++ K +++ M + + + TYN++I G
Sbjct: 420 CRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAY 479
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
+ + G+ D T+ I+ + + + I N Y A+I
Sbjct: 480 KLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGH 539
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
KA + E + +RM + C P+S T++ + KEG
Sbjct: 540 CKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEG 578
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 6/285 (2%)
Query: 81 IPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKK--QWFQALQVFEMLKEQP 138
I G+ SKR + L + ++K + V HV K + A ++ ++LKE
Sbjct: 431 ICGF-SKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENG 489
Query: 139 FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA 198
P + TY + L KS + E A +FN + E+GI+ +YTAL+ +C+ IDEA
Sbjct: 490 LV-PDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEA 548
Query: 199 FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
L +M + +C P+ TY++LI + + ++ ++M + V P T I++
Sbjct: 549 ISLLERMHS-EDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIE 607
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
+ G FD RV + M+ S KPDV+T + + G V E + G+
Sbjct: 608 EMLREGDFDHANRVFNQMV-SFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVM 666
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
P++ T+ +LI AY + + +V++ M + +NN+I
Sbjct: 667 PDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 136/322 (42%), Gaps = 58/322 (18%)
Query: 159 QPELARKVFNEM--VEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
P +A + FN + ++ G + T + ++ LL N+L F +++
Sbjct: 98 NPNIALQFFNSLPLIKPGFKHTVKSHSFLLKILIPNNL----FGVGEKIRI--------- 144
Query: 217 TYSTLIKACV--DAMRF--ELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
++IKACV D +RF + + + +D ++ + + N +L + M D+M+RV
Sbjct: 145 ---SMIKACVSVDDIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRV 201
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
+ ML P+++T+NT+++ ++ G + + K G+ P++ T+ LI Y
Sbjct: 202 YTEMLNDMIV-PNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYC 260
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
+ N+V A+ F M +G + +
Sbjct: 261 RN-------------------------NDVNSAYK----------VFNMMPNKGCRRNEV 285
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
++ +I+G AG + IS + + V Y +I A D +E ++ M
Sbjct: 286 SYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEM 345
Query: 453 KEKHCRPDSETFSIMTEAYAKE 474
+E+ C P+ T+++M +A KE
Sbjct: 346 RERSCEPNVHTYTVMVDAMCKE 367
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/339 (19%), Positives = 129/339 (38%), Gaps = 39/339 (11%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
+Y +LL++L + + ++V+ EM+ + I P ++ AY + I EA + ++++
Sbjct: 181 SYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKI 240
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
PD +TY++LI ++ M + N V+ ++ G +AG
Sbjct: 241 FQ-AGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGR 299
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTIL-SVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
D+ + M E C P V T I+ ++F N ++ M+ + + R +P T+
Sbjct: 300 IDEGISLFKKMRED-DCYPTVRTYTVIIHALFGNDRNLEGMD-LFNEMRERSCEPNVHTY 357
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
+++ A K+R D+ ++ +M
Sbjct: 358 TVMVDAMCKERKLDESRRILN-----------------------------------EMME 382
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
+G+ T+ LI GY G + + L N YN +I K + +
Sbjct: 383 KGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHK 442
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ +M E P T++ + K G D Y L
Sbjct: 443 AMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKL 481
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 160/399 (40%), Gaps = 41/399 (10%)
Query: 126 QALQVFEMLKEQ--PFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
+AL++ M+ + P +Y +L K G + A ++EM++ GI P Y+
Sbjct: 181 EALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYS 240
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMD 242
+++AA C+ +D+A LN M PD TY++++ C E I TL + M
Sbjct: 241 SIIAALCKAQAMDKAMEVLNTM-VKNGVMPDCMTYNSILHGYCSSGQPKEAIGTL-KKMR 298
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
V PN VT + ++ K G + ++ M + +PD+ T T+L +A KG +
Sbjct: 299 SDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGL-EPDIATYRTLLQGYATKGAL 357
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
M + GI P+ FNILI AY K+ D+ V MR+ Y V
Sbjct: 358 VEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTV 417
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA-------------------- 402
I+ G FEQM EG+ + + LI+G
Sbjct: 418 IDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGI 477
Query: 403 --NAGLFHKVISS-------------VRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
N F+ +I S L ++ + ++ YN +I C A + E +
Sbjct: 478 CLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATK 537
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ M +PD T+ + Y + D AL +E
Sbjct: 538 LLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKE 576
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 155/350 (44%), Gaps = 9/350 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF-V 200
P TY L+ ++G+ +L +V++G +T LL C + +A +
Sbjct: 90 PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRF-ELIETLYQDMDER--SVTPNTVTQNIVL 257
L +M L C PDV++Y+ L+K D R E +E L+ D+R P+ V+ N VL
Sbjct: 150 VLRRMTEL-GCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVL 208
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD-MMERWYEKFRNFG 316
G+ K G D+ ML+ PDV T ++I++ +D ME +N G
Sbjct: 209 NGFFKEGDSDKAYSTYHEMLDRGIL-PDVVTYSSIIAALCKAQAMDKAMEVLNTMVKN-G 266
Query: 317 IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME 376
+ P+ T+N ++ Y + ++ MR TY++++ G +
Sbjct: 267 VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEAR 326
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
F+ M G++ D T+ L+ GYA G ++ + + L + I + +N +I A
Sbjct: 327 KIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAY 386
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALEQ 485
K + + + V+ +M++ P+ + + + K G ++D + EQ
Sbjct: 387 AKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQ 436
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 135/321 (42%), Gaps = 7/321 (2%)
Query: 160 PELARKVFNEMVEEG---IEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
P A +N M G + PT Y L+ CR +D F L + + D
Sbjct: 70 PAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNV-VKKGFRVDAI 128
Query: 217 TYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
T++ L+K C D + ++ + + M E P+ + N +L G + +L
Sbjct: 129 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHM 188
Query: 276 MLE--SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
M + PDV + NT+L+ F +G D Y + + GI P+ T++ +I A K
Sbjct: 189 MADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK 248
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+ DK V+ M K TYN+++ + G K T ++M ++G++ + T
Sbjct: 249 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVT 308
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+ L+N G + +K + +++ Y ++ L+EM + M
Sbjct: 309 YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMV 368
Query: 454 EKHCRPDSETFSIMTEAYAKE 474
+PD F+I+ AYAK+
Sbjct: 369 RNGIQPDHHVFNILICAYAKQ 389
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 136/329 (41%), Gaps = 2/329 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY +L SGQP+ A +M +G+EP Y++L+ C+N EA
Sbjct: 269 PDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKI 328
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ M T +PD+ TY TL++ + L M + P+ NI++ Y
Sbjct: 329 FDSM-TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYA 387
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K DQ V S M + P+V T++ V G VD ++E+ + G+ P
Sbjct: 388 KQEKVDQAMLVFSKMRQHGL-NPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNI 446
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+ LI +DK ++ M + +N++I++ G E F+
Sbjct: 447 IVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL 506
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G+K D T+ LI+G AG + + + + ++ Y +I+ +
Sbjct: 507 MVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSR 566
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEA 470
+ + ++K M P+ T++I+ +
Sbjct: 567 MDDALALFKEMVSSGVSPNIITYNIILQG 595
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 162/370 (43%), Gaps = 27/370 (7%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A ++F+ + ++ +P TY LL G + + MV GI+P ++ L
Sbjct: 324 EARKIFDSMTKRGL-EPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNIL 382
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ AY + +D+A + ++M+ P+V Y T+I + + ++ M +
Sbjct: 383 ICAYAKQEKVDQAMLVFSKMRQ-HGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG 441
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+TPN + ++ G +D+ E ++ ML+ C ++ N+I+ +G+V
Sbjct: 442 LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIF-FNSIIDSHCKEGRVIES 500
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E+ ++ G+ P+ T+N LI D+ + ++ M + TY +I
Sbjct: 501 EKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLING 560
Query: 366 F---SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK---------VISS 413
+ S M DA + F++M + G+ + T+ ++ G LFH +S
Sbjct: 561 YCRVSRMDDALAL---FKEMVSSGVSPNIITYNIILQG-----LFHTRRTAAAKELYVSI 612
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ ++L++ S YN ++ K + E R+++ + + ++ TF+IM A K
Sbjct: 613 TKSGTQLEL----STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 668
Query: 474 EGMNDKVYAL 483
G D+ L
Sbjct: 669 CGRMDEAKDL 678
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 150/350 (42%), Gaps = 8/350 (2%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP + L+ K + + A VF++M + G+ P Y ++ C++ +D+A +
Sbjct: 373 QPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAML 432
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
QM P++ Y++LI +++ E L +M +R + NT+ N ++ +
Sbjct: 433 YFEQMID-EGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSH 491
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + E++ M+ KPD+ T NT++ G++D + + G+ P+
Sbjct: 492 CKEGRVIESEKLFDLMVRIGV-KPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPD 550
Query: 321 TRTFNILIGAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
T+ LI Y + RM D ++ E + P TYN +++ + +
Sbjct: 551 IVTYGTLINGYCRVSRMDDALALFKEMVSSGVSP-NIITYNIILQGLFHTRRTAAAKELY 609
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
+ G + + T+ +++G L + + + + +N +I A +K
Sbjct: 610 VSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKC 669
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG----MNDKVYALEQ 485
+ E + ++ PD T+S+M E ++G ++D ++E+
Sbjct: 670 GRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEE 719
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 137/345 (39%), Gaps = 2/345 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L K+G+ ARK+F+ M + G+EP Y LL Y + E
Sbjct: 303 EPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHA 362
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L+ M QPD + ++ LI A + + ++ M + + PN V V+
Sbjct: 363 LLDLM-VRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVL 421
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K+G D M++ P++ +++ + D E + + GI
Sbjct: 422 CKSGSVDDAMLYFEQMIDEGL-TPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLN 480
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T FN +I ++ K+ + + + M ++ TYN +I+ G
Sbjct: 481 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLA 540
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
M + G+K D T+ LINGY ++ + ++ N+ YN ++
Sbjct: 541 SMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTR 600
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
+ +Y + + + + T++I+ K + D+ + Q
Sbjct: 601 RTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQ 645
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 157/421 (37%), Gaps = 83/421 (19%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QA+ VF +++ P Y ++ +L KSG + A F +M++EG+ P +YT+L
Sbjct: 394 QAMLVFSKMRQHGL-NPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 452
Query: 186 LAAYCR--------------------------NSLID----EAFVT----LNQMKTLPNC 211
+ C NS+ID E V L +
Sbjct: 453 IHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV 512
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
+PD+ TY+TLI C A + + L M V P+ VT ++ GY + D
Sbjct: 513 KPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALA 572
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+ M+ S P++ T N IL + + + Y G E T+NI++
Sbjct: 573 LFKEMVSSGV-SPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGL 631
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
K + D+ + + + + T+N +I A G + F A G+ D
Sbjct: 632 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDV 691
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
+T+ + AEN+ I+ L E++ ++
Sbjct: 692 RTYSLM-------------------------AENL----------IEQGSLEELDDLFLS 716
Query: 452 MKEKHCRPDSETFSIMTEAYAKEG-----------MNDKVYALEQEKLQMLLEASG-HWQ 499
M+E C DS + + + G +++K ++LE LLE+S W+
Sbjct: 717 MEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLESSPIVWE 776
Query: 500 Q 500
Q
Sbjct: 777 Q 777
>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
Length = 822
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 148/351 (42%), Gaps = 8/351 (2%)
Query: 136 EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI 195
E + P TY L+ LGK G E +F EM + G+ P ++Y +++ A C+
Sbjct: 266 EAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSA 325
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI 255
+A V L QM C PD+ T++TLI E ++ R + PN ++
Sbjct: 326 TQAMVILKQMFA-SGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTP 384
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
++ G+ G +L M+ PDV T ++ G+V EK
Sbjct: 385 LIHGFCMRGELMAASDLLMEMMGRGH-TPDVVTFGALIHGLVVAGKVSEALIVREKMTER 443
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF---SDMGDA 372
+ P+ +N+LI KK M +++E M + Y +I+ F ++GDA
Sbjct: 444 QVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDA 503
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAV 432
+ + FE M +G++ D + +I GY G+ + I + K+ + Y V
Sbjct: 504 RKI---FEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTV 560
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
IS K +L R M ++ C+P+ T+S + Y K G D L
Sbjct: 561 ISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGL 611
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 167/417 (40%), Gaps = 46/417 (11%)
Query: 98 LERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKS 157
L A +A + + ++D +A + E L+EQ P+ +LL LL +
Sbjct: 126 LAGAAPTRACLGALVAAYAD---AGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQ 182
Query: 158 GQPELARKVFNEM------------------------VEEGIE-----------PTPELY 182
+ + ARK+++EM VEEG++ P Y
Sbjct: 183 RRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFY 242
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
L+ YCR + + L +M+ P + TY +LI E I +L+ +M
Sbjct: 243 NVLIDGYCRRGDMGRGLLLLGEMEA-KGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMR 301
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
+R ++PN N V+ K Q +L M S C PD+ T NT+++ ++G V
Sbjct: 302 KRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASG-CDPDIITFNTLITGLCHEGHV 360
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYG-KKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
E + + ++P ++ LI + + + +ME M + P T+
Sbjct: 361 RKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTP-DVVTFGA 419
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF--HKVISSVRLASK 419
+I G E+M + D + LI+G + K I L
Sbjct: 420 LIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKN 479
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+Q E V Y +I I++++L + ++++ M+ K RPD + + M + Y + GM
Sbjct: 480 VQPDEFV--YATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGM 534
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 139/349 (39%), Gaps = 26/349 (7%)
Query: 145 GTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQ 204
G + LV+ GK + + R+ +M E + P +Y L++ C+ ++ A L +
Sbjct: 418 GALIHGLVVAGKVSEALIVRE---KMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEE 474
Query: 205 MKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG 264
M N QPD + Y+TLI + + +++ M+ + V P+ V+ N ++ GY + G
Sbjct: 475 MLE-KNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFG 533
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
M + +S M C PD +T T++S +A +G ++ RW P T+
Sbjct: 534 MMSEAILCMSNM-RKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTY 592
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
+ LI Y K D + M+ TY +I + FE M
Sbjct: 593 SSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLL 652
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSV------------------RLASKLQIAENV 426
+ T L+NG + VI+S+ +L + N
Sbjct: 653 NHCSPNDVTLHYLVNGLTSCT--PCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRN- 709
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
S YNA+I + + + L E RM +K P+ TF + + G
Sbjct: 710 SAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVG 758
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 118/309 (38%), Gaps = 1/309 (0%)
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
M G PT AL+AAY ++ +A +++ P+V + L+K V
Sbjct: 121 LQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLV 180
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
+ R++ LY +M + + +++ G G ++ +++ A C P V
Sbjct: 181 EQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARW-GAGCIPHV 239
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
N ++ + +G + + G P T+ LI GKK +K+ S+
Sbjct: 240 VFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLE 299
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
MRK YN+VI+A A +QM A G D TF LI G + G
Sbjct: 300 MRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGH 359
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
K +R A + ++ N Y +I +LM + M + PD TF
Sbjct: 360 VRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGA 419
Query: 467 MTEAYAKEG 475
+ G
Sbjct: 420 LIHGLVVAG 428
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/172 (19%), Positives = 64/172 (37%), Gaps = 1/172 (0%)
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY-NNVIEAFSDMGDAKH 374
G P L+ AY M K + + E +R+ T+ N +++ +
Sbjct: 128 GAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDD 187
Query: 375 MEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVIS 434
+++M E AD + C L+ G G + + + +V FYN +I
Sbjct: 188 ARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLID 247
Query: 435 ACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ D+ + M+ K P T+ + K+G +K+ +L E
Sbjct: 248 GYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLE 299
>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
Length = 550
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 160/376 (42%), Gaps = 52/376 (13%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A+ +FE + Y P ++ ++ + + G + A ++ M E G P + L+
Sbjct: 201 AVALFESWIQDGLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILV 260
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
CR ++ L +++ C P+V TY+++I A R E ++Y DM E
Sbjct: 261 DGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGT 320
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PNTVT N+++ GYGKA + R+ ++ C PDV T ++++ + GQ+D
Sbjct: 321 RPNTVTYNVLINGYGKALDMESAVRMYRQLILR-RCPPDVVTFSSLIDGYCRCGQLDDAM 379
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF-----PWTSSTYNN 361
R +++ I P TF+I+I + K+ ++ + + ++R+L P T YN
Sbjct: 380 RIWKEMGQHHIQPNVYTFSIIIHSLCKQ---NRSAEALGFLRELNMRADIAPQT-FIYNP 435
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
VI+ G + M +G D T+ LI G+ G +
Sbjct: 436 VIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKG---------------R 480
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
I E ++ ++ +M E CRPD T + K GM ++V
Sbjct: 481 IPEAITLFH--------------------KMVETGCRPDKITVNSFISCVLKAGMPNEVD 520
Query: 482 ALEQEKLQMLLEASGH 497
Q++L ASGH
Sbjct: 521 -------QIMLIASGH 529
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 166/390 (42%), Gaps = 44/390 (11%)
Query: 127 ALQVFEMLKEQPF-YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
AL++F L P P E +Y ++ LL +SG+ A K+F++M ++ ++ +
Sbjct: 93 ALRIFSALHSPPLSVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSF 152
Query: 186 LAAYCRNSLIDEAFVTL----------------NQMKTLPNCQ----------------- 212
+A C N+ + +A VTL N + L +
Sbjct: 153 VAGSCTNAGLLDAAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDG 212
Query: 213 ---PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
PD ++++ +IK F+ L + M E +P+T+T NI++ G +A ++
Sbjct: 213 LYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRG 272
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+L + C P+V T +++S + G+++ Y G P T T+N+LI
Sbjct: 273 HDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLIN 332
Query: 330 AYGKKRMYDKMSSVMEYMRKL---QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
YGK M S + R+L + P T++++I+ + G +++M
Sbjct: 333 GYGKAL---DMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHH 389
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVR-LASKLQIAENVSFYNAVISACIKADDLMEM 445
++ + TF +I+ + + +R L + IA YN VI K + E
Sbjct: 390 IQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEA 449
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ M+EK C PD T++I+ + +G
Sbjct: 450 NLIVTDMEEKGCHPDKYTYTILIIGHCMKG 479
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 104/250 (41%), Gaps = 8/250 (3%)
Query: 91 IKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQV------FEMLKEQPFYQPKE 144
+ N +K LE + + +T + ++L +A QV L+ P
Sbjct: 231 VGNFQKALELVERMTEF-GCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNV 289
Query: 145 GTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQ 204
TY ++ K+G+ E A V+N+M+E G P Y L+ Y + +L E+ V + +
Sbjct: 290 VTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGK-ALDMESAVRMYR 348
Query: 205 MKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG 264
L C PDV T+S+LI + + ++++M + + PN T +I++ K
Sbjct: 349 QLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQN 408
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
+ L + A P + N ++ + GQV+ G P+ T+
Sbjct: 409 RSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTY 468
Query: 325 NILIGAYGKK 334
ILI + K
Sbjct: 469 TILIIGHCMK 478
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 110/253 (43%), Gaps = 4/253 (1%)
Query: 93 NLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLV 152
+L ++L+R V T S + + AL V+ + E +P TY L+
Sbjct: 274 DLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESG-TRPNTVTYNVLIN 332
Query: 153 LLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQ 212
GK+ E A +++ +++ P +++L+ YCR +D+A +M + Q
Sbjct: 333 GYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQ-HHIQ 391
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERS-VTPNTVTQNIVLGGYGKAGMFDQMER 271
P+VYT+S +I + R ++++ R+ + P T N V+ K G ++
Sbjct: 392 PNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANL 451
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+++ M E C PD +T ++ KG++ + K G P+ T N I
Sbjct: 452 IVTDM-EEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRPDKITVNSFISCV 510
Query: 332 GKKRMYDKMSSVM 344
K M +++ +M
Sbjct: 511 LKAGMPNEVDQIM 523
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 172/356 (48%), Gaps = 5/356 (1%)
Query: 100 RKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSG- 158
R A+ A V + ++ A Q+ + +++Q +P ++ L+ KSG
Sbjct: 213 RFAREGATVQVFNAMMGVYARSGRFDDARQLLDAMRDQDI-EPDLVSFNTLINARAKSGC 271
Query: 159 -QPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
+A ++ +E+ + G+ P Y L++A + S +D+A +M C+PD++T
Sbjct: 272 LAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEM-IASECRPDLWT 330
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y+ ++ + + E +++++ E+ P+ VT N +L + K G +++ERV ++
Sbjct: 331 YNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELV 390
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
+ A + D T NT++ ++ G++D+ Y++ R G P+ T+ +L+ + GK
Sbjct: 391 K-AGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRI 449
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
+ V+E M T T++ +I A++ G E TF++M G+K D + +
Sbjct: 450 SEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVM 509
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
++ +A + K++ R K + Y +++A K ++ E+E V + M+
Sbjct: 510 LDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDME 565
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 150/331 (45%), Gaps = 14/331 (4%)
Query: 159 QPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTY 218
Q LA VF EG T +++ A++ Y R+ D+A L+ M+ + +PD+ ++
Sbjct: 203 QDALAEDVFLRFAREG--ATVQVFNAMMGVYARSGRFDDARQLLDAMRD-QDIEPDLVSF 259
Query: 219 STLIKA-----CVDA-MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
+TLI A C+ A + EL+ + Q + P+ +T N ++ + D V
Sbjct: 260 NTLINARAKSGCLAAGVALELLHEVRQ----AGLRPDAITYNTLISACSQGSNLDDAVAV 315
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
M+ S C+PD+WT N ++SV G+ E +++ G P+ T+N L+ A+
Sbjct: 316 FEEMIAS-ECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFA 374
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K+ +++ V E + K F TYN +I + MG +++M A G D
Sbjct: 375 KEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAV 434
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
T+ L++ + + + + + ++A+I A K+ + ER + RM
Sbjct: 435 TYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRM 494
Query: 453 KEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
E +PD + +M + +A+ K+ L
Sbjct: 495 VESGVKPDRLAYLVMLDVFARSDETRKLMVL 525
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 155/341 (45%), Gaps = 18/341 (5%)
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL--PNCQ 212
+SG+ + AR++ + M ++ IEP + L+ A ++ + A V L + + +
Sbjct: 232 ARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCL-AAGVALELLHEVRQAGLR 290
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
PD TY+TLI AC + ++++M P+ T N ++ +G+ G + E +
Sbjct: 291 PDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELM 350
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
++E +PD T N++L FA +G V+ +ER E+ G + T+N +I YG
Sbjct: 351 FKELVEKGF-QPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYG 409
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K D + + MR + + TY ++++ M E+M G+K
Sbjct: 410 KMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLV 469
Query: 393 TFCCLINGYANAG-------LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
TF LI YA +G F +++ S +L Y ++ ++D+ ++
Sbjct: 470 TFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLA-------YLVMLDVFARSDETRKL 522
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+Y+ M + +PD + ++ A AK +D++ + Q+
Sbjct: 523 MVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQD 563
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 158/371 (42%), Gaps = 52/371 (14%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K W QA + LK++ + + L+ +SG E AR +F+ M+++G PT E
Sbjct: 762 KLWQQAENFVKGLKQESGVDRR--IWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVES 819
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
++ A + +DE +V + +++ L + + T +++A A + +Y M
Sbjct: 820 VNGMMRALIVDGRLDELYVVVQELQDL-DIKISKSTVLLMLEAFAKAGDVFEVMKIYNGM 878
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
PN I++ F +E +++ M E A KPD+ +NT+L ++ G
Sbjct: 879 KAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEM-EGAGFKPDLVVLNTLLLMYTGTGN 937
Query: 302 VDMMERWYEKF--------------------RNF---------------GIDPETRTFNI 326
D Y RNF G+ P+ ++ I
Sbjct: 938 FDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKI 997
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
L+ A GK +++++ + E MR + S Y+ +++ + + + E+ M +G
Sbjct: 998 LLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDG 1057
Query: 387 MKADTKTFCCLINGYANAGL---FHKVISSVRLASKLQIAENVSFYNAVISACIKADD-- 441
++ T L+ Y +G KV++S++ +S L+I + Y+ V+ A ++ D
Sbjct: 1058 IEPTIATMHILMTSYGTSGHPDEAEKVLNSLK-SSNLEI--STLPYSTVLDAYLRNRDYS 1114
Query: 442 -----LMEMER 447
L+EM+R
Sbjct: 1115 LGITKLLEMKR 1125
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 96/236 (40%), Gaps = 40/236 (16%)
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM---MERWYE 310
N ++G Y ++G FD ++L M + +PD+ + NT+++ A G + +E +E
Sbjct: 225 NAMMGVYARSGRFDDARQLLDAMRDQ-DIEPDLVSFNTLINARAKSGCLAAGVALELLHE 283
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
R G+ P+ T+N LI A + D +V E M + TYN ++ G
Sbjct: 284 -VRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCG 342
Query: 371 DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYN 430
A+ E F+++ +G + D T YN
Sbjct: 343 KAQEAELMFKELVEKGFQPDAVT-----------------------------------YN 367
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+++ A K D+ +ERV + + + R D T++ M Y K G D L E
Sbjct: 368 SLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDE 423
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 148/376 (39%), Gaps = 50/376 (13%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P Y+ +L + +S + ++ M+++G +P LY LLAA + + DE
Sbjct: 500 KPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEG 559
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+ M+ + P V + S LIKA C+ L Q + P+ + +L
Sbjct: 560 VIQDMEAVFEMNPLVIS-SILIKAECISQGASLLKRACLQGYE-----PDGKSLLSILDA 613
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYE----KFRNF 315
Y K G ++ +L + + ++ + +I+ + N VD ++ + K +F
Sbjct: 614 YEKMGKHEKGLSLLEWIRQHVPNSHNLISECSIMLLCKNGKIVDAIQEYSRKQMLKRGSF 673
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSV---MEYMR----------------KLQFPWTS 356
G D + + LI + ++ + V M+++ +L FP T+
Sbjct: 674 GQDCD--LYEYLITYLEEAELFPEACQVFCDMQFLGIVPSQKVFPSFIFQCCRLGFPETA 731
Query: 357 -----------------STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
S +IEA+ + + E + + E D + + LI+
Sbjct: 732 YQLMDDAARSDISLNILSCRVAMIEAYGKLKLWQQAENFVKGLKQES-GVDRRIWNALIH 790
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
YA +GL+ + + K V N ++ A I L E+ V + +++ +
Sbjct: 791 AYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKI 850
Query: 460 DSETFSIMTEAYAKEG 475
T +M EA+AK G
Sbjct: 851 SKSTVLLMLEAFAKAG 866
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 73/176 (41%), Gaps = 23/176 (13%)
Query: 49 TNKHTSFSSESAVAAKKRLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWV 108
T K S+ A + K +LW++ + E GYR R+ I ++ K+ R A+ +
Sbjct: 989 TPKLESYKILLAASGKAKLWEQADLL-FEEMRTKGYRLNRS-IYHMMMKIYRNARNHS-- 1044
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
+A + +KE +P T L+ G SG P+ A KV N
Sbjct: 1045 -----------------KAEHLLSAMKEDGI-EPTIATMHILMTSYGTSGHPDEAEKVLN 1086
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
+ +E + Y+ +L AY RN L +MK +PD +++ I+A
Sbjct: 1087 SLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKR-DGVEPDHQVWTSFIRA 1141
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 60/318 (18%), Positives = 113/318 (35%), Gaps = 45/318 (14%)
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+LY L+ L EA M+ L P + + I C R ET YQ
Sbjct: 678 DLYEYLITYLEEAELFPEACQVFCDMQFL-GIVPSQKVFPSFIFQCC---RLGFPETAYQ 733
Query: 240 DMDERS---VTPNTVTQNI-VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
MD+ + ++ N ++ + ++ YGK ++ Q E + G+ + +
Sbjct: 734 LMDDAARSDISLNILSCRVAMIEAYGKLKLWQQAENFVKGLKQES--------------- 778
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
G+D R +N LI AY + +Y+ ++ + M K T
Sbjct: 779 --------------------GVD--RRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPT 816
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
+ N ++ A G + +++ +K T ++ +A AG +V+
Sbjct: 817 VESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYN 876
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
N+ Y +IS ++E + M+ +PD + + Y G
Sbjct: 877 GMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTG 936
Query: 476 MNDKVYALEQEKLQMLLE 493
D+ + L+ LE
Sbjct: 937 NFDRTIEVYHSILEAGLE 954
>gi|225446761|ref|XP_002278350.1| PREDICTED: pentatricopeptide repeat-containing protein At3g59040
[Vitis vinifera]
gi|302143502|emb|CBI22063.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 167/355 (47%), Gaps = 8/355 (2%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K+W ++ E L+ QP++ E ++ L+ GK G A +VF +M ++G P+
Sbjct: 118 KKWSLVSEILEWLQTQPWWDFSEMDFLMLVTAYGKQGDFNKAERVFGDMHKKGYSPSVIS 177
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+TAL+ AY + ++A +M + +P TY ++K V+ +F+ E ++ +
Sbjct: 178 HTALMEAYGKGKQYNKAESVFRRMLS-SGPEPSALTYQLILKIFVEGNKFKEAEETFETL 236
Query: 242 --DERS-VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
DE+S + P+ ++++ Y KAG +++ ++ M E + V T N+++S N
Sbjct: 237 LDDEKSPLKPDQKMFHMMIYMYRKAGNYEKARKIFGLMRERGVPQSTV-TYNSLMSFETN 295
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
+V + Y++ + G+ P+ ++ +LI AYGK R ++ +V E M T
Sbjct: 296 YKEVS---KTYDQMQRAGLRPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 352
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN +++AF+ G F+ M + D ++ +++ Y NA R
Sbjct: 353 YNILLDAFAISGMVDQARTVFKSMRRDRCTPDICSYTTMLSAYVNASDMEGAEKFFRRLK 412
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ NV Y +I K +L +M Y+ M+ + + ++ M +AY K
Sbjct: 413 QDGFEPNVVTYGTLIKGYAKISNLEKMMEKYEEMQVHGIKANQAIYTAMMDAYGK 467
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 4/189 (2%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P +Y L+ GK+ + E A VF EM++ G+ PT + Y LL A+ + ++D+A
Sbjct: 312 RPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 371
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
M+ C PD+ +Y+T++ A V+A E E ++ + + PN VT ++ GY
Sbjct: 372 VFKSMRR-DRCTPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFEPNVVTYGTLIKGY 430
Query: 261 GKAGMFDQM-ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K ++M E+ + ++T ++ + W+++ G+ P
Sbjct: 431 AKISNLEKMMEKYEEMQVHGIKANQAIYT--AMMDAYGKNKDFGSAVFWFKEMGFCGVPP 488
Query: 320 ETRTFNILI 328
+ + NIL+
Sbjct: 489 DRKATNILL 497
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 115/253 (45%), Gaps = 15/253 (5%)
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMER--VLSGMLESATCKP--DVWTMNTILSV--FAN 298
S + +++VLG + F Q+++ ++S +LE +P D M+ ++ V +
Sbjct: 96 STKNQALPRDLVLGTLVR---FKQLKKWSLVSEILEWLQTQPWWDFSEMDFLMLVTAYGK 152
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
+G + ER + G P + L+ AYGK + Y+K SV M ++ T
Sbjct: 153 QGDFNKAERVFGDMHKKGYSPSVISHTALMEAYGKGKQYNKAESVFRRMLSSGPEPSALT 212
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQM---HAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
Y +++ F + K E TFE + +K D K F +I Y AG + K
Sbjct: 213 YQLILKIFVEGNKFKEAEETFETLLDDEKSPLKPDQKMFHMMIYMYRKAGNYEKARKIFG 272
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
L + + ++ YN+++S + E+ + Y +M+ RPD +++++ AY K
Sbjct: 273 LMRERGVPQSTVTYNSLMSF---ETNYKEVSKTYDQMQRAGLRPDVVSYALLINAYGKAR 329
Query: 476 MNDKVYALEQEKL 488
++ A+ +E L
Sbjct: 330 REEEALAVFEEML 342
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 171/383 (44%), Gaps = 13/383 (3%)
Query: 104 AKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELA 163
K V T H L+ ++ +A +F+ +K++ +P TY + L K G+ E A
Sbjct: 247 VKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGL-EPDCYTYNSFISGLCKEGRLEEA 305
Query: 164 RKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIK 223
+ +M+E G+ P Y AL+ YC +D+A+ ++M + + TY+ I
Sbjct: 306 SGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMIS-KGIMASLVTYNLFIH 364
Query: 224 ACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK 283
A R + + ++M E+ + P+ VT NI++ GY + G + +L M+ +
Sbjct: 365 ALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGI-Q 423
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P + T +++ V + ++ + + K + G+ P+ FN LI + D+ +
Sbjct: 424 PTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQL 483
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
++ M ++ TYN +++ + G + ++M G+K D ++ LI+GY+
Sbjct: 484 LKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSK 543
Query: 404 AGLFHKVISSVRLASKLQIA---ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
G + + R+ ++ + YNA+I K + E + K M K PD
Sbjct: 544 RG---DMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPD 600
Query: 461 SETFSIMTEAYAK----EGMNDK 479
T+ + EA EG +DK
Sbjct: 601 DSTYLSIIEAMETVDDLEGNDDK 623
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 168/354 (47%), Gaps = 11/354 (3%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL+ F ++KE+ F P T ++L L K + ++A ++ EM I + + +
Sbjct: 164 EALECFYLIKEKGFV-PNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIM 222
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ + +A + M+TL +P+V TY+T+I +F+ ++Q M ++
Sbjct: 223 INVLCKEGKLKKAKEFIGHMETL-GVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKG 281
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+ T N + G K G ++ ++ MLE P+ T N ++ + NKG +D
Sbjct: 282 LEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLV-PNAVTYNALIDGYCNKGDLDKA 340
Query: 306 ERWYEKFRNFGIDPETRTFNILIGA-YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ ++ + GI T+N+ I A + + RM D + + E K P + T+N +I
Sbjct: 341 YAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMP-DAVTHNILIN 399
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ--- 421
+ GDAK ++M +G++ T+ LI Y G +++ + L SK+Q
Sbjct: 400 GYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLI--YV-LGKRNRMKEADALFSKIQQEG 456
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ ++ +NA+I ++ ++ K M PD T++ + + Y +EG
Sbjct: 457 LLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREG 510
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 145/331 (43%), Gaps = 8/331 (2%)
Query: 159 QPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTY 218
+P A + F + E+G P E +L+ + + + A+V +M + N + +YT+
Sbjct: 161 KPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRM-NIRSSLYTF 219
Query: 219 STLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
+ +I + + + M+ V PN VT N ++ G+ G F Q RV+ ++
Sbjct: 220 NIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKF-QRARVIFQTMK 278
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
+PD +T N+ +S +G+++ K G+ P T+N LI Y K D
Sbjct: 279 DKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLD 338
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAF---SDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
K + + M + TYN I A MGDA +M ++M +GM D T
Sbjct: 339 KAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNM---IKEMREKGMMPDAVTHN 395
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
LINGY G + + I + Y ++I K + + E + ++ +++++
Sbjct: 396 ILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQE 455
Query: 456 HCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
PD F+ + + + G D+ + L +E
Sbjct: 456 GLLPDIIVFNALIDGHCANGNIDRAFQLLKE 486
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/155 (20%), Positives = 60/155 (38%)
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T F++L+ AY + + ++ +++ F T N ++ F + + +
Sbjct: 146 TLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYA 205
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M +++ TF +IN G K + L + NV YN +I
Sbjct: 206 EMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRG 265
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+++ MK+K PD T++ KEG
Sbjct: 266 KFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEG 300
>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
Length = 1765
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 145/342 (42%), Gaps = 8/342 (2%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+ P TY L+ LGK G E +F EM + G P ++Y +++ A C+ +A
Sbjct: 1213 FLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAM 1272
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
V L QM C PD+ T++TLI E ++ R + PN ++ ++ G
Sbjct: 1273 VILKQMFA-SGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHG 1331
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ G +L M+ PDV T ++ G+V EK + P
Sbjct: 1332 FCMRGELMVASDLLVEMMGRGH-TPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFP 1390
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF---SDMGDAKHME 376
+ +N+LI KKRM +++E M + Y +I+ F ++GDA+ +
Sbjct: 1391 DVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKI- 1449
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
FE M +G+ D + +I GY G+ + I + K+ + Y VIS
Sbjct: 1450 --FEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGY 1507
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
K +L R M ++ C+P+ T+S + Y K G D
Sbjct: 1508 AKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTD 1549
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 165/428 (38%), Gaps = 78/428 (18%)
Query: 98 LERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKS 157
L A +A + + ++D + + A ++ E ++EQ P+ +LL LL +
Sbjct: 1069 LAGAAPTRACLGALVAAYADAGMLGK---ATKMCERVREQYGSLPEVTHCNRLLKLLVEQ 1125
Query: 158 GQPELARKVFNEM------------------------VEEGIE-----------PTPELY 182
+ + ARK+++EM VEEG++ P Y
Sbjct: 1126 RRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFY 1185
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
L+ YCR + + L +M+T P + TY +LI E I +L+ +M
Sbjct: 1186 NVLIDGYCRRGDMGRGLLLLGEMET-KGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMR 1244
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
+R +PN N V+ K Q +L M S C PD+ T NT+++ ++G V
Sbjct: 1245 KRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASG-CDPDIITFNTLITGLCHEGHV 1303
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
E + E +R+ P +Y +
Sbjct: 1304 RKAEHFLR----------------------------------EAIRRELNP-NQLSYTPL 1328
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I F G+ +M G D TF LI+G AG + + ++ Q+
Sbjct: 1329 IHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQV 1388
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK-EGMND--K 479
+V+ YN +IS K L + + + M EK+ +PD ++ + + + + E + D K
Sbjct: 1389 FPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARK 1448
Query: 480 VYALEQEK 487
++ + K
Sbjct: 1449 IFEFMEHK 1456
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 139/349 (39%), Gaps = 26/349 (7%)
Query: 145 GTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQ 204
G + LV+ GK + + R+ +M E + P +Y L++ C+ ++ A L +
Sbjct: 1361 GALIHGLVVAGKVSEALIVRE---KMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEE 1417
Query: 205 MKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG 264
M N QPD + Y+TLI + + +++ M+ + + P+ V+ N ++ GY + G
Sbjct: 1418 MLE-KNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFG 1476
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
M + +S M C PD +T T++S +A +G ++ RW P T+
Sbjct: 1477 MMSEAILCMSNM-RKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTY 1535
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
+ LI Y K D + M+ TY +I + FE M
Sbjct: 1536 SSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLL 1595
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSV------------------RLASKLQIAENV 426
+ T L+NG + VI+S+ +L + N
Sbjct: 1596 NHCSPNDVTLHYLVNGLTSCT--PCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRN- 1652
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
S YNA+I + + + L E RM +K P+ TF + + G
Sbjct: 1653 SAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVG 1701
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 124/310 (40%), Gaps = 3/310 (0%)
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
M G PT AL+AAY ++ +A +++ P+V + L+K V
Sbjct: 1064 LQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLV 1123
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
+ R++ LY +M + + + +++ G ++ +++ A C P V
Sbjct: 1124 EQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARW-GAGCIPHV 1182
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
N ++ + +G + + G P T+ LI GKK +K+ S+
Sbjct: 1183 VFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLE 1242
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
MRK F YN+VI+A A +QM A G D TF LI G + G
Sbjct: 1243 MRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGH 1302
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISA-CIKADDLMEMERVYKRMKEKHCRPDSETFS 465
K +R A + ++ N Y +I C++ + ++ + + + M H PD TF
Sbjct: 1303 VRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHT-PDVVTFG 1361
Query: 466 IMTEAYAKEG 475
+ G
Sbjct: 1362 ALIHGLVVAG 1371
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 165/358 (46%), Gaps = 16/358 (4%)
Query: 157 SGQPELARKVFNEMV-EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
+G + A VF M +E ++Y ++ + R+S ID+A +M+ C+PD
Sbjct: 132 AGSLQHAVHVFRWMKNQENYCARNDIYGMMIRLHARHSQIDQARGLFFEMQEW-RCKPDA 190
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
Y++LI A A ++ + DM ++ P+ T N V+ G AG + + +
Sbjct: 191 DIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALELCKK 250
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
M + PD+ T N +LS F N Q ++E + I P+T T NI+I K
Sbjct: 251 MTRNGV-GPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDG 309
Query: 336 MYDKMSSVMEYMR--KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
Y + ++ MR + Q P TY +++ ++ G + + F+ M AEG+K + +
Sbjct: 310 QYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVS 369
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+ L+ YA+ G+ + +L + + +V Y +++A ++ + +K M+
Sbjct: 370 YNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMR 429
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDKVYAL--EQEK---------LQMLLEASGHWQQ 500
+ CRP+ +++ + +AY GM + +L E EK + LL A G +Q
Sbjct: 430 KNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQ 487
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 170/386 (44%), Gaps = 10/386 (2%)
Query: 94 LKKKLERKAKAKAWV--NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLL 151
L KK+ R V N V F + Q+ +A+ FEM+K P T ++
Sbjct: 247 LCKKMTRNGVGPDLVTHNIVLSAFKN---GSQYSKAIAYFEMMKGANI-APDTFTLNIVI 302
Query: 152 VLLGKSGQPELARKVFNEMVEEGIEPTPEL--YTALLAAYCRNSLIDEAFVTLNQMKTLP 209
L K GQ A ++ N M E+ + P++ YT+++ +Y +++ + M
Sbjct: 303 HCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMM-VAE 361
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+P++ +Y+ L+ A +++ + + + P+ V+ +L YG++G ++
Sbjct: 362 GVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKA 421
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
M ++ +C+P++ + N ++ + + G + GI P+ + + L+
Sbjct: 422 REAFKEMRKN-SCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLT 480
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
A G+ R K+ +++E + YN+ I ++ + GD + M A +
Sbjct: 481 ACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNP 540
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
D T+ LI+G G + + + L+I Y+++I + +K L E E +
Sbjct: 541 DAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTF 600
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEG 475
MKE C PD T++ M EAY +G
Sbjct: 601 SSMKESGCLPDVLTYTAMIEAYNDDG 626
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 139/310 (44%), Gaps = 3/310 (0%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL +F++LK+ +P +Y LL G+SGQPE AR+ F EM + P Y AL+
Sbjct: 386 ALGIFKLLKQNGL-RPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALI 444
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
AY + EA L++M+ PDV + STL+ AC + I+T+ + R +
Sbjct: 445 DAYGSAGMFKEAISLLHEMEK-DGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGI 503
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
N V N +G Y G + + + + M+ S PD T N ++S G+
Sbjct: 504 KLNIVCYNSGIGSYLNFGDYGKALELYAVMMAS-NVNPDAVTYNILISGLCKVGKYAESL 562
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+++E + I ++ LI +Y K+ + S M++ TY +IEA+
Sbjct: 563 KFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAY 622
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
+D G ++ F++M ++ D L+ +V+ + L + I N
Sbjct: 623 NDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQHERVLQLMELMKEKCIPLNQ 682
Query: 427 SFYNAVISAC 436
Y +I++C
Sbjct: 683 KAYFEIIASC 692
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 151/365 (41%), Gaps = 4/365 (1%)
Query: 121 KKQWFQALQVFEMLKEQPFYQ--PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPT 178
+K+ +AL++ M+ + + P +Y ++ GQ + +F EM++ GI P
Sbjct: 178 EKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPD 237
Query: 179 PELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
YT ++ C+ L D A QM +P++ TY+ LI + +++ + +
Sbjct: 238 VVTYTTVIDGLCKAQLFDRAEAVFQQMID-NGVKPNIDTYNCLIHGYLSIGKWKEVVRML 296
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
++M PN T +L K G + M+ KP V T +L +A
Sbjct: 297 EEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGI-KPSVTTYGIMLHGYAT 355
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
KG + M GI P FNI AY K + DK + MR+ + +
Sbjct: 356 KGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVS 415
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
Y +I+A +G E F QM EG+ D F L+ G + KV
Sbjct: 416 YGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEML 475
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ I N+ F+N ++ K +ME +R+ ++ RPD +++ + + + G D
Sbjct: 476 NVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTID 535
Query: 479 KVYAL 483
+ L
Sbjct: 536 EASKL 540
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 143/340 (42%), Gaps = 4/340 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ + G E F +++ G + LL C + EA
Sbjct: 92 PNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDV 151
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRF-ELIETLYQDMDER--SVTPNTVTQNIVLG 258
L Q C PD +Y+ L+K + R E +E L+ D++ S PN V+ + V+
Sbjct: 152 LLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVIN 211
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
G+ G D+ + M++ PDV T T++ D E +++ + G+
Sbjct: 212 GFFTEGQVDKPYNLFLEMMDRGI-PPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVK 270
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P T+N LI Y + ++ ++E M TY +++ G + +
Sbjct: 271 PNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFF 330
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
F+ M +G+K T+ +++GYA G ++ + L I+ N +N SA K
Sbjct: 331 FDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAK 390
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ + ++ +M+++ PD+ ++ + +A K G D
Sbjct: 391 CGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVD 430
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 145/356 (40%), Gaps = 39/356 (10%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
K G + A +FN+M ++G+ P Y AL+ A C+ +D+A V NQM PD+
Sbjct: 390 KCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMIN-EGVTPDI 448
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV------------------------ 251
+S+L+ ++E +E L+ +M + PN V
Sbjct: 449 VVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDS 508
Query: 252 -----------TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
+ N ++ G+ AG D+ ++L GM+ S KPD ++ NT+L + G
Sbjct: 509 IECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMV-SVGLKPDSFSYNTLLHGYCKAG 567
Query: 301 QVDMMERWYEKFRNFGIDPETRTFN-ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
++D + K + GI P T+N IL G + KR + + + M W TY
Sbjct: 568 RIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKR-FSEAKELYLNMINSGTKWDIYTY 626
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
N ++ F+ + ++G++ + TF +I G +
Sbjct: 627 NIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPA 686
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ +NV Y V+ I+ L E + ++ M++ P+S+ + + G
Sbjct: 687 NGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRG 742
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 144/359 (40%), Gaps = 4/359 (1%)
Query: 129 QVFEMLKEQPFYQPKEG--TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+V ML+E PK TY LL L K+G+ AR F+ M+ +GI+P+ Y +L
Sbjct: 291 EVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIML 350
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
Y + E LN M P+ + ++ A + ++ M ++ +
Sbjct: 351 HGYATKGALSEMHDLLNLM-VANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGL 409
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
+P+ V+ ++ K G D E + M+ PD+ ++++ + + +E
Sbjct: 410 SPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGV-TPDIVVFSSLVYGLCTVDKWEKVE 468
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ + N GI P FN ++ K+ + +++ + + +YN +I+
Sbjct: 469 ELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGH 528
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G E M + G+K D+ ++ L++GY AG S R I V
Sbjct: 529 CLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGV 588
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
YN ++ + E + +Y M + D T++I+ K D+ + Q
Sbjct: 589 VTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQ 647
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 125/302 (41%), Gaps = 3/302 (0%)
Query: 166 VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIK 223
+ M E G P Y LL C +EA L+ M + +C P+V +YST+I
Sbjct: 152 LLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVIN 211
Query: 224 ACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK 283
+ + L+ +M +R + P+ VT V+ G KA +FD+ E V M+++ K
Sbjct: 212 GFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGV-K 270
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P++ T N ++ + + G+ + R E+ G P T+ L+ K +
Sbjct: 271 PNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFF 330
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ M + +TY ++ ++ G M M A G+ + F + YA
Sbjct: 331 FDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAK 390
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
G+ K + + ++ + Y A+I A K + + E + +M + PD
Sbjct: 391 CGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVV 450
Query: 464 FS 465
FS
Sbjct: 451 FS 452
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/383 (20%), Positives = 147/383 (38%), Gaps = 36/383 (9%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ +F +++Q P +Y L+ L K G+ + A FN+M+ EG+ P ++++L
Sbjct: 396 KAMDIFNKMRQQGL-SPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSL 454
Query: 186 LAAYC---RNSLIDEAFVTLNQMKTLPN-------------------------------C 211
+ C + ++E F + + PN
Sbjct: 455 VYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGV 514
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
+PDV +Y+TLI A + L + M + P++ + N +L GY KAG D
Sbjct: 515 RPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYS 574
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
ML + P V T NTIL + + Y N G + T+NI++
Sbjct: 575 HFRKMLSNGI-TPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGL 633
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
K D+ + + + T+N +I A G + F + A G+ +
Sbjct: 634 CKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNV 693
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
T+ ++ G + S K A N NA++ + D+ +
Sbjct: 694 VTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSK 753
Query: 452 MKEKHCRPDSETFSIMTEAYAKE 474
+ E++ ++ T S++ ++ +
Sbjct: 754 LDERNFSVEASTTSMLISIFSSD 776
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/384 (18%), Positives = 147/384 (38%), Gaps = 37/384 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY +L L ++ + A++++ M+ G + Y +L C+++ +DEA +
Sbjct: 586 PGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEA-IK 644
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ Q Q ++ T++ +I A + R E L+ + + N VT +V+
Sbjct: 645 MFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLI 704
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF--RNFGIDP 319
+ G ++ + + S M ++ T P+ +N ++ ++G + + K RNF ++
Sbjct: 705 EEGSLEEFDSLFSAMEKNGT-APNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEA 763
Query: 320 ETRTFNILI--------------------------GAYGKKRMYDKMSSVMEYMRKLQFP 353
T + I I K R D S+ M
Sbjct: 764 STTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLT 823
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
TYN ++ G + + M + + T+ ++NG + +
Sbjct: 824 PDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKM 883
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ + N+ +N +I A +K + ++ + PD T+ ++ E +
Sbjct: 884 FQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIE 943
Query: 474 EGMNDKVYALEQ-EKLQMLLEASG 496
EG +LE+ + L + +E SG
Sbjct: 944 EG------SLEEFDGLFLTMEKSG 961
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 6/181 (3%)
Query: 219 STLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
S LIK A R + +L+++M + +TP+ VT N +L G + G F + + + M+
Sbjct: 798 SALIKK---ARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMIN 854
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK-KRMY 337
S T + +++T N IL+ VD + ++ + G+ TFNI+IGA K R
Sbjct: 855 SRT-QMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKE 913
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
D M P TY V E + G + + F M G D++ L
Sbjct: 914 DAMDLFAAIPANGLVP-DVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNAL 972
Query: 398 I 398
+
Sbjct: 973 V 973
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 71/177 (40%), Gaps = 2/177 (1%)
Query: 195 IDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQN 254
ID+A+ +M + PDV TY+T++ RF + LY M N T N
Sbjct: 807 IDDAYSLFREM-LMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYN 865
Query: 255 IVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRN 314
I+L G K+ D+ ++ + S + ++ T N ++ G+ + +
Sbjct: 866 IILNGLCKSNCVDEAFKMFQSLC-SKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPA 924
Query: 315 FGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
G+ P+ T+ ++ ++ ++ + M K P S N ++ GD
Sbjct: 925 NGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGD 981
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 80/182 (43%), Gaps = 4/182 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY +L L ++G+ A++++ M+ + Y +L C+++ +DEAF
Sbjct: 824 PDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKM 883
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ + Q ++ T++ +I A + R E L+ + + P+ VT +V
Sbjct: 884 FQSLCS-KGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLI 942
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF--RNFGIDP 319
+ G ++ + + M +S T D +N ++ +G + + K +NF ++
Sbjct: 943 EEGSLEEFDGLFLTMEKSGT-PLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEA 1001
Query: 320 ET 321
T
Sbjct: 1002 ST 1003
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 164/343 (47%), Gaps = 20/343 (5%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA--- 198
P TY L+ + G A ++F+EM+E+ I PT +YT L+ C S I EA
Sbjct: 191 PNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESM 250
Query: 199 FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
F T+ LPN +YTY+T++ + LYQ+M + PN VT I++
Sbjct: 251 FRTMRNSGMLPN----LYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILID 306
Query: 259 GYGKAGMFDQMERVLSGMLESAT--CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG 316
G K D+M +++ A+ P+++ N ++ + G + + +
Sbjct: 307 GLCKT---DEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363
Query: 317 IDPETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
I P+ T++ILI G G RM ++ +++ M+K F + TYN +I+ + G+ +
Sbjct: 364 ILPDVFTYSILIKGLCGVDRM-EEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKA 422
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI---AENVSFYNAV 432
QM +G++ + TF LI+GY AG K+ +++ L +++ I +V Y A+
Sbjct: 423 IEVCSQMTEKGIEPNIITFSTLIDGYCKAG---KMEAAMGLYTEMVIKGLLPDVVAYTAL 479
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
I K + E R++K M+E P+ T S + + K+G
Sbjct: 480 IDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDG 522
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 144/351 (41%), Gaps = 6/351 (1%)
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE-EGIEPTPELYTALLAA 188
+ +L Y L+ L S + + VFN + E + TP ++ L+ A
Sbjct: 76 IIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSVFNVLSRLESSKFTPNVFGVLIIA 135
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP 248
+ L++EA +M LP Q L+K RF+ + +Y DM R +P
Sbjct: 136 FSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVKK----GRFDTMWKVYGDMVARGASP 191
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW 308
N VT ++ G + G F + R+ M+E P V ++ + ++ E
Sbjct: 192 NVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKI-FPTVVIYTILIRGLCGESRISEAESM 250
Query: 309 YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD 368
+ RN G+ P T+N ++ Y K K + + M T+ +I+
Sbjct: 251 FRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCK 310
Query: 369 MGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSF 428
+ M + G+ + + CLI+GY AG + +S K +I +V
Sbjct: 311 TDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFT 370
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
Y+ +I D + E + + + MK+K P++ T++ + + Y KEG +K
Sbjct: 371 YSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEK 421
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 135/333 (40%), Gaps = 2/333 (0%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L K G+ + KV+ +MV G P Y L+ CR +AF ++M P
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE-KKIFP 226
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
V Y+ LI+ R E++++ M + PN T N ++ GY K + +
Sbjct: 227 TVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELY 286
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
ML P+V T ++ ++ ++ +FG+ P +N LI Y K
Sbjct: 287 QEMLGDGL-LPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCK 345
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+ S+ + K + TY+ +I+ + + + ++M +G + T
Sbjct: 346 AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+ LI+GY G K I ++ I N+ ++ +I KA + +Y M
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV 465
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
K PD ++ + + + K+G + + L +E
Sbjct: 466 IKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKE 498
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 114/275 (41%), Gaps = 16/275 (5%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A + + +K++ F P TY L+ K G E A +V ++M E+GIEP ++ L
Sbjct: 386 EADGLLQEMKKKGFL-PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTL 444
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ YC+ ++ A +M + PDV Y+ LI + L+++M E
Sbjct: 445 IDGYCKAGKMEAAMGLYTEM-VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVL------------SGMLESATCKPDVWTMNTIL 293
+ PN T + ++ G K G ++ + L+ + C P+ ++
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALI 563
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQF 352
G++ +++ R G+ P+ T ++I G + + D M + ++
Sbjct: 564 QGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGII 623
Query: 353 PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
P SS Y + + + + G K E + G+
Sbjct: 624 P-NSSVYRVLAKGYEESGYLKSALRCSEDLSGIGI 657
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 163/362 (45%), Gaps = 9/362 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL + + + P +Y ++ L G+ A +FNEMV++G+ P Y ++
Sbjct: 254 EALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSI 313
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A C+ +D+A + L QM + QPD TY+ +I R++ ++++M
Sbjct: 314 VHALCKARAMDKAELVLRQMFD-NSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREG 372
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+ VT N ++ K + + + KPD+ + + +L +A +G+ M
Sbjct: 373 LIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGH-KPDIISYSILLHGYATEGRFVDM 431
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ + GI ++ FNILI A+ K+ M D+ + MR TY VI A
Sbjct: 432 NNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAA 491
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA-- 423
MG QM + G+K +T + LI G+ G +I + L S++
Sbjct: 492 LCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHG---DLIKAKELVSEMMDQGI 548
Query: 424 --ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
N++F++++I + +M + V+ + RPD TF+ + + Y G DK +
Sbjct: 549 PRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAF 608
Query: 482 AL 483
+
Sbjct: 609 GV 610
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 132/348 (37%), Gaps = 49/348 (14%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ ++ +P+L F ++ G+ + L C DEA L
Sbjct: 167 TYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHR 226
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ C PD ++Y+T+IK+ + GG
Sbjct: 227 MSELGCVPDAFSYNTVIKS-------------------------------LCGGSRSQEA 255
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D + R M + C PDV + ++ +G++ + + G+ P T+N
Sbjct: 256 LDMLLR----MTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYN 311
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
++ A K R DK V+ M TY +I +S +G K F++M E
Sbjct: 312 SIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTRE 371
Query: 386 GMKADTKTFCCLINGYAN-------AGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
G+ D TF L++ A +FH + A+K + +S Y+ ++
Sbjct: 372 GLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSI------ATKGHKPDIIS-YSILLHGYAT 424
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
++M ++ M + DS F+I+ A+AK GM D+ + E
Sbjct: 425 EGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTE 472
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 4/206 (1%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
EML ++ +P TY +L L ++G+ A+K+F+EM+E G + YT +L CR
Sbjct: 648 EMLCKR--VKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCR 705
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
N+ DEA +++ + N + ++ +T+I A R E L+ + + PN
Sbjct: 706 NNCTDEAITLFHKLGAM-NLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNAS 764
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
T +++ K G ++ + + S M E C P +N I+ + KG++ + K
Sbjct: 765 TYGVMIINLLKEGSVEEADIMFSSM-EKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSK 823
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMY 337
I E T ++LI + K Y
Sbjct: 824 VDGTIISLEASTTSLLISLFASKGRY 849
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/402 (18%), Positives = 168/402 (41%), Gaps = 22/402 (5%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H + +AL +F ++ Q P TY ++ L + G+ A + ++M+ G++P
Sbjct: 457 HAKRGMMDEALLIFTEMRGQGV-SPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKP 515
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
+Y +L+ +C + + +A +++M +P++ +S++I + + R + +
Sbjct: 516 NTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDV 575
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
+ + P+ T N ++ GY G D+ VL M+ + T +PDV T +T+++ +
Sbjct: 576 FNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGT-EPDVVTYSTLINGYF 634
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
G++D + + + P T T+++++ + + M + + S
Sbjct: 635 KSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSIS 694
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL---FHKVISSV 414
TY +++ F ++ A +K + +I+ H + +SV
Sbjct: 695 TYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASV 754
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS--------- 465
S + N S Y +I +K + E + ++ M++ C P S +
Sbjct: 755 ---SASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQK 811
Query: 466 --IMTEAYAKEGMNDKVYALEQEKLQMLLE---ASGHWQQNI 502
I+ Y ++ + +LE +L+ + G +++ I
Sbjct: 812 GEIVKAGYYMSKVDGTIISLEASTTSLLISLFASKGRYREQI 853
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 168/368 (45%), Gaps = 11/368 (2%)
Query: 125 FQALQVFEMLKEQPF---------YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
F+ L + L++ PF + +Y L+ LL +SG A +++ MV EG+
Sbjct: 166 FKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGL 225
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
+P+ + ++AL+ A + + L +M++L +P++YTY+ I+ A R +
Sbjct: 226 KPSLKTFSALMVATGKRRDTETVKSLLEEMESL-GLKPNIYTYTICIRVLGRAGRIDEAC 284
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
+ + M++ P+ VT +++ AG D + M ++++ KPD T T+L
Sbjct: 285 RIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKM-KASSHKPDRVTYITMLDK 343
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
F++ G + ++ ++ + G P+ TF IL+ A K D+ +++ MRK
Sbjct: 344 FSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPN 403
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
TYN +I + F M G+ T+ I+ Y +G K + +
Sbjct: 404 LHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFE 463
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
IA N+ NA + + + L E + ++ R+K PDS T+++M + Y+K G
Sbjct: 464 KMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAG 523
Query: 476 MNDKVYAL 483
D+ L
Sbjct: 524 QVDEAIEL 531
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 151/335 (45%), Gaps = 2/335 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY + +LG++G+ + A ++ M ++G P YT L+ A C +D+A
Sbjct: 261 KPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAME 320
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+MK + +PD TY T++ D ++ + +M+ P+ +T I++
Sbjct: 321 LFVKMKASSH-KPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNAL 379
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
KAG D+ +L M + P++ T NT++S ++D + G+ P
Sbjct: 380 CKAGNIDEAFHLLDVMRKQGVL-PNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPT 438
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+ + I YGK DK E M+ N + + ++MG + + F
Sbjct: 439 AYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFN 498
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
++ + G+ D+ T+ ++ Y+ AG + I + S+ Q ++ N++I+ KA
Sbjct: 499 RLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAG 558
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ E +++ R+K+ P T++ + KEG
Sbjct: 559 RVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEG 593
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 161/346 (46%), Gaps = 10/346 (2%)
Query: 143 KEGT-YMKLLVLLGKSGQPELARKVFNEMVEE-GIEPTPELYTALLAAYCRNSLIDEAFV 200
K+G+ M ++ +L K Q +A+ VF +E G++PT E Y L+ + + A+
Sbjct: 752 KDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWN 811
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+MK C PDV+TY+ L+ A + + + LY+ M S PNT+T NI++
Sbjct: 812 LFTEMKN-AGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANL 870
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K+ D+ + ++ S P T +L G+++ + +E+ ++G P
Sbjct: 871 VKSNSLDKALDLFYDLV-SGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPN 929
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+NILI +GK + + + M + +Y +++ + G + FE
Sbjct: 930 NAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFE 989
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACI 437
++ G+ D+ + +I+G + H++ ++ L ++Q I ++ YN++I
Sbjct: 990 KLKQTGLYLDSIAYNLMIDGLGRS---HRIEEALTLYDEMQSRGINPDLFTYNSLILNLG 1046
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
A + + ++Y+ ++ P+ T++ + Y+ G +D YA+
Sbjct: 1047 VAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAV 1092
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 150/347 (43%), Gaps = 8/347 (2%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
KQ A VF ++ +P +Y L+ E+A +F EM G P
Sbjct: 768 KQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFT 827
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y LL A+ ++ I+E F QM +C+P+ T++ +I V + + L+ D+
Sbjct: 828 YNLLLDAHGKSGKINELFELYEQM-ICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDL 886
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+P T +L G K+G ++ + + M++ C+P+ N +++ F G
Sbjct: 887 VSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYG-CRPNNAIYNILINGFGKTGD 945
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
V+ +++ GI P+ +++ L+G + D E +++ S YN
Sbjct: 946 VNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNL 1005
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+I+ + +++M + G+ D T+ LI AG+ + + +L +LQ
Sbjct: 1006 MIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQ---AGKLYEELQ 1062
Query: 422 ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ NV YNA+I + + VYKRM C P++ TF+
Sbjct: 1063 FIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFA 1109
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 125/275 (45%), Gaps = 3/275 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A + +++++Q P TY L+ L + + + A +FN M G+ PT Y
Sbjct: 387 EAFHLLDVMRKQGVL-PNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILF 445
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ Y ++ D+A T +MK + P++ + + + + R + ++ +
Sbjct: 446 IDFYGKSGRSDKALETFEKMK-IRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNG 504
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P++VT N+++ Y KAG D+ +LS M E+ C+PD+ +N++++ G+VD
Sbjct: 505 LAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQ-CEPDIIVINSLINTLYKAGRVDEA 563
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ + + ++ + P T+N LI GK+ + + M P + T+N +++
Sbjct: 564 WKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDC 623
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+ +M D TF +I+G
Sbjct: 624 LCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHG 658
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 105/470 (22%), Positives = 189/470 (40%), Gaps = 39/470 (8%)
Query: 25 HDTKTNKHRAQVPNFNLIHCSVTST-NKHTSFSSESAVAAKKRLWKEGEYPGVSETSIPG 83
H+ +K R +V N N + C S KH ++ + GV+ S G
Sbjct: 33 HNNGISKGR-RVRNLNFLTCGSLSIWEKHKE--------------RQVGFGGVAVKSSHG 77
Query: 84 YR-SKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQP 142
+KR P L K + A +N++ + A F + E PF
Sbjct: 78 LVVAKRKPKNALSSK-----EVMAVLNSILDPT----------DAFSYFNSVAEMPFVVH 122
Query: 143 KEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL-AAYCRNSLIDEAFVT 201
T +L +L + VFN M + I+ Y + + R L F
Sbjct: 123 TTETCNHMLEILRIHRRVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPF-A 181
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+M+ + Y+Y+ LI + + +Y+ M + P+ T + ++ G
Sbjct: 182 FGKMRE-AGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATG 240
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K + ++ +L M ES KP+++T + V G++D R ++ + G P+
Sbjct: 241 KRRDTETVKSLLEEM-ESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDV 299
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+ +LI A D + M+ TY +++ FSD GD ++ + +
Sbjct: 300 VTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSE 359
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M A+G D TF L+N AG + + + K + N+ YN +IS ++ +
Sbjct: 360 MEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNR 419
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ-EKLQM 490
L + ++ M+ P + T+ + + Y K G +DK ALE EK+++
Sbjct: 420 LDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDK--ALETFEKMKI 467
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 165/402 (41%), Gaps = 45/402 (11%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL+ FE +K + P L L + G+ A+ +FN + G+ P Y +
Sbjct: 457 KALETFEKMKIRGI-APNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMM 515
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ Y + +DEA L+ M C+PD+ ++LI A R + ++ + +
Sbjct: 516 MKCYSKAGQVDEAIELLSDMSE-NQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMK 574
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P VT N ++ G GK G + + + M + C P+ T NTIL +VD+
Sbjct: 575 LAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNG-CPPNTITFNTILDCLCKNDEVDLA 633
Query: 306 ERWYEKFRNFGIDPETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFP--WTSSTYNNV 362
+ K P+ TFN +I G +KR+ D + + M+K+ P T T
Sbjct: 634 LKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAI-WLFHQMKKMLTPDCVTLCTLLPG 692
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING-YANAG-----LF--------- 407
+ M DA + F +H G+ D + + L+ G AG LF
Sbjct: 693 VVKNGLMEDAFKIAEDF--VHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRV 750
Query: 408 ----------------HK---VISSV--RLASKLQIAENVSFYNAVISACIKADDLMEME 446
HK V SV R +L + + YN +I + +
Sbjct: 751 CKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAW 810
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
++ MK C PD T++++ +A+ K G ++++ L ++ +
Sbjct: 811 NLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMI 852
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 115/275 (41%), Gaps = 1/275 (0%)
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
+P + +Y+ LI+ + E+ L+ +M P+ T N++L +GK+G +++
Sbjct: 787 KPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFE 846
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+ M+ S +CKP+ T N I++ +D + + P T+ L+
Sbjct: 847 LYEQMICS-SCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGL 905
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
K ++ + E M ++ YN +I F GD F++M EG++ D
Sbjct: 906 LKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDL 965
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
K++ L+ AG + + + + YN +I ++ + E +Y
Sbjct: 966 KSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDE 1025
Query: 452 MKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
M+ + PD T++ + GM ++ L +E
Sbjct: 1026 MQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEE 1060
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 121/293 (41%), Gaps = 37/293 (12%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY LL GKSG+ +++ +M+ +P + ++A +++ +D+A
Sbjct: 823 PDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDL 882
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ + + P TY L+ + + R E + L+++M + PN NI++ G+G
Sbjct: 883 FYDLVS-GDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFG 941
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR-------- 313
K G + + M+ +PD+ + +++ G+VD ++EK +
Sbjct: 942 KTGDVNTACELFKRMVREGI-RPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDS 1000
Query: 314 ---------------------------NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
+ GI+P+ T+N LI G M ++ + E
Sbjct: 1001 IAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEE 1060
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
++ + TYN +I +S G++ +++M G +T TF L N
Sbjct: 1061 LQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQLPN 1113
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 157/367 (42%), Gaps = 7/367 (1%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
W ++F + + Y T+ ++ +L K G+ + A+ M G++P Y
Sbjct: 221 WVLYAEMFRLKIKSTVY-----TFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYN 275
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
++ YC ++ A + L+ MK +PD YTY +LI + E + + M E
Sbjct: 276 TVIHGYCSRGRVEGARMVLDIMKN-RGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKE 334
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+ P VT N ++ GY G + M+ A P V T N ++ +G++D
Sbjct: 335 IGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAIL-PTVSTYNLLIHALFLEGKMD 393
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ + + GI P++ T+NILI Y + K ++ + M T TY ++I
Sbjct: 394 EADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLI 453
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
S K + FE++ EG D F LI+G+ G + + ++ K I
Sbjct: 454 YVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIV 513
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ YN ++ + + E + K MK + RPD +++ + Y+K G + + +
Sbjct: 514 PDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTI 573
Query: 484 EQEKLQM 490
E L +
Sbjct: 574 RDEMLSI 580
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 156/349 (44%), Gaps = 7/349 (2%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A V +++K + +P TY L+ + K G+ E A + +M E G+ PT Y L+
Sbjct: 290 ARMVLDIMKNRGV-EPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLI 348
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
YC + +AF ++M P V TY+ LI A + + + + +DM + +
Sbjct: 349 DGYCNKGDLVKAFGYRDEM-VRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGI 407
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P+++T NI++ GY + G + + M+ S +P + T +++ V + + ++ +
Sbjct: 408 VPDSITYNILINGYCRCGNAKKAFNLHDEMI-SKGIQPTLVTYTSLIYVLSKRNRMKAAD 466
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+EK G P+ FN LI + D+ ++++ M K TYN +++
Sbjct: 467 DLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGR 526
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G + ++M G++ D ++ LI+GY+ G + + +R L I N
Sbjct: 527 CREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFT-IR-DEMLSIGFNP 584
Query: 427 SF--YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ YNA+I K E + K M K PD T+ + E K
Sbjct: 585 TLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGK 633
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 133/306 (43%), Gaps = 37/306 (12%)
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
++ L+ A C D+AF + MK P + T++ ++ + + E + LY +
Sbjct: 168 VFDMLIRACCELKRGDDAFECFDMMKE-KGVVPKIETFNAMLSLFLKLNQTETVWVLYAE 226
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M + T NI++ K G + + + G +E+ KP+V T NT++ + ++G
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFI-GSMENLGVKPNVVTYNTVIHGYCSRG 285
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+V+ + +N G++P++ T+ LI K ++ S ++E M+++ T+ TYN
Sbjct: 286 RVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYN 345
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+I+ + + GD K F GY + VR A
Sbjct: 346 TLIDGYCNKGDL------------------VKAF-----GYRD--------EMVRRA--- 371
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
I VS YN +I A + E + + K M + PDS T++I+ Y + G K
Sbjct: 372 -ILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKA 430
Query: 481 YALEQE 486
+ L E
Sbjct: 431 FNLHDE 436
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 100/232 (43%), Gaps = 37/232 (15%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY L+ +L K + + A +F +++ EG P ++ AL+ +C N +D AF
Sbjct: 443 QPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAF- 501
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L ++MD+R++ P+ VT N ++ G
Sbjct: 502 -----------------------------------ALLKEMDKRNIVPDEVTYNTLMQGR 526
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ G ++ +L M + +PD + NT++S ++ +G ++ ++ + G +P
Sbjct: 527 CREGKVEEARELLKEM-KRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPT 585
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
T+N LI K + D +++ M STY ++IE + D+
Sbjct: 586 LLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDS 637
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 175/404 (43%), Gaps = 23/404 (5%)
Query: 83 GYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQP 142
GY+ + L K L K + K ++ F D V+ Q FQ QV
Sbjct: 197 GYQPNTIILTTLMKGLCLKGEVKKSLH-----FHDKVVA-QGFQMNQV------------ 238
Query: 143 KEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTL 202
+Y LL L K G+ A K+ + + P +Y ++ C++ L++EA+
Sbjct: 239 ---SYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFY 295
Query: 203 NQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGK 262
+M + PDV TYSTLI A + +L +M +++ P+ T I++ K
Sbjct: 296 TEMNS-RGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCK 354
Query: 263 AGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETR 322
G + + +L G++ KP+V T +T++ + G+V ++ + ++P
Sbjct: 355 EGKLKEAKNLL-GVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVC 413
Query: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
++NI+I K + D+ +++ M + TYN++I+ G +++
Sbjct: 414 SYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKEL 473
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
H G AD T+ L++G K I+ + I N Y A+I K L
Sbjct: 474 HHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARL 533
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+++++ + K C D T+++M KEGM D+ A++ +
Sbjct: 534 KNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSK 577
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 163/368 (44%), Gaps = 15/368 (4%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A+++ M++++ +P Y ++ L K A + EM GI P Y+ L+
Sbjct: 256 AIKLLRMIEDRS-TRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLI 314
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+C + AF LN+M TL N PDVYTY+ LI A + + + L M + V
Sbjct: 315 CGFCLAGQLMGAFSLLNEM-TLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGV 373
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PN VT + ++ GY G +++ M+++ P V + N +++ VD
Sbjct: 374 KPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEV-NPSVCSYNIMINGLCKGKSVDEAM 432
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF---PWTSSTYNNVI 363
+ + + P T T+N LI K +++S ++ M++L P TY +++
Sbjct: 433 NLLREMLHKNVVPNTVTYNSLIDGLCKS---GRITSALDLMKELHHRGQPADVITYTSLL 489
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI- 422
+ + F +M G++ + T+ LI+G ++ ++ +L + +
Sbjct: 490 DGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGA---RLKNAQKLFQHILVK 546
Query: 423 --AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+V YN +I K L E + +M++ C PD+ TF I+ + ++ NDK
Sbjct: 547 GCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKA 606
Query: 481 YALEQEKL 488
L E +
Sbjct: 607 EKLLHEMI 614
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 80/182 (43%), Gaps = 10/182 (5%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L KSG+ A + E+ G YT+LL C+N +D+A
Sbjct: 445 PNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIAL 504
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+MK QP+ YTY+ LI R + + L+Q + + + T N+++GG
Sbjct: 505 FMKMKE-RGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLC 563
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD--------MMERWYEKFR 313
K GM D+ + S M E C PD T I+ K + D M+ + FR
Sbjct: 564 KEGMLDEALAMKSKM-EDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLHFR 622
Query: 314 NF 315
NF
Sbjct: 623 NF 624
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 85/229 (37%), Gaps = 1/229 (0%)
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
TP+ + +LG K F LS +E +PD+ T++ +++ F + GQ+
Sbjct: 129 TPSIIEFGKILGSLVKMKHFPTAIS-LSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSF 187
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
K G P T L+ K K + + F +Y ++
Sbjct: 188 SVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGL 247
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
+G+ + + + D + +I+G L ++ + I +V
Sbjct: 248 CKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDV 307
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
Y+ +I A LM + M K+ PD T++I+ +A KEG
Sbjct: 308 ITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEG 356
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 69/171 (40%)
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
GI+P+ T +ILI + SV+ + KL + + +++ G+ K
Sbjct: 162 GIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKS 221
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
+ +++ A+G + + ++ L+NG G I +R+ +V YN +I
Sbjct: 222 LHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDG 281
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
K + E Y M + PD T+S + + G ++L E
Sbjct: 282 LCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNE 332
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 15/151 (9%)
Query: 117 DHVLKKQWF-QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
D + K Q +A+ +F +KE+ QP + TY L+ L K + + A+K+F ++ +G
Sbjct: 490 DGLCKNQNLDKAIALFMKMKERGI-QPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGC 548
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
Y ++ C+ ++DEA ++M+ C PD T+ +I++ + + E
Sbjct: 549 CIDVYTYNVMIGGLCKEGMLDEALAMKSKMED-NGCIPDAVTFEIIIRSLFEKDENDKAE 607
Query: 236 TLYQDM------------DERSVTPNTVTQN 254
L +M ERS N V N
Sbjct: 608 KLLHEMIAKGLLHFRNFHGERSPVTNKVIVN 638
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 156/363 (42%), Gaps = 38/363 (10%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
+ Q+L F + Y ++L L GK Q +LA V + M G+E T ++
Sbjct: 158 FLQSLAFFNWSSSLDGFPASPEPYNEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVHTFS 217
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
AL+ Y R L EA N+M+ C PD+ +S +I + R ++ + +
Sbjct: 218 ALVRRYVRAGLAAEAVHAFNRMEDY-GCTPDMVAFSIVISSLCKKRRANEAQSFFDSLKH 276
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
R P+ V ++ G+ +AG + E V S M + A KP+V+T + ++ GQ+
Sbjct: 277 R-FEPDVVVYTSLVHGWCRAGDISKAEEVFSDM-KMAGIKPNVYTYSIVIDSLCRCGQIT 334
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ + + G DP TFN L+ + K +K+ V M++L P + +YN +I
Sbjct: 335 RAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFII 394
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
E+ E ++ K + L K +A
Sbjct: 395 ES---------------HCRDENLEEAAKI--------------------LNLMVKKGVA 419
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
N S +N + K D+ R+Y RMKE +C+P++ T++I+ +A+ D V +
Sbjct: 420 PNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAESRSTDMVLKM 479
Query: 484 EQE 486
++E
Sbjct: 480 KKE 482
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 144/339 (42%), Gaps = 24/339 (7%)
Query: 60 AVAAKKRLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHV 119
AV A R+ G P + SI I +L KK R +A+++ +++ F V
Sbjct: 232 AVHAFNRMEDYGCTPDMVAFSIV--------ISSLCKK-RRANEAQSFFDSLKHRFEPDV 282
Query: 120 -----LKKQWFQA------LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
L W +A +VF +K +P TY ++ L + GQ A VF+
Sbjct: 283 VVYTSLVHGWCRAGDISKAEEVFSDMKMAGI-KPNVYTYSIVIDSLCRCGQITRAHDVFS 341
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
EM++ G +P + +L+ + + ++ NQMK L C D +Y+ +I++
Sbjct: 342 EMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRL-GCPADTISYNFIIESHCRD 400
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
E + M ++ V PN T N + G K + R+ + M E C+P+ T
Sbjct: 401 ENLEEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMKE-LNCQPNTLT 459
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM-EYM 347
N ++ +FA DM+ + ++ ++P T+ ILI + + ++ +M E +
Sbjct: 460 YNILMRMFAESRSTDMVLKMKKEMDESQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMV 519
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
+ S Y V+E G K E ++M A G
Sbjct: 520 EEKCLRPNLSVYETVLELLRKAGQLKKHEELVDKMVARG 558
>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
Length = 649
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 154/345 (44%), Gaps = 12/345 (3%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E T+ + ++G + A ++ ++M G P +Y+ L+ + +D+A
Sbjct: 223 PNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL 282
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
LN M C+P+ Y+ +K A R+E I L +M + +PN T ++++
Sbjct: 283 LNTML----CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLC 338
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ + D VL M E C+PD N I++ + +G+VD R + P+
Sbjct: 339 QNNLVDSAVEVLEQM-EKYGCEPDTVNYNIIINSLSERGRVDDALRL---LNSMVCKPDA 394
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
FN ++ + + + S ++ M + P T+N +I+ G + FEQ
Sbjct: 395 LGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQ 454
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M D T+ L+NG++ GL V +++L + ++ YNAV+ +A
Sbjct: 455 MPRYRCTPDIVTYSSLLNGFSEQGL---VEVAIQLFRSMPCKPDIFSYNAVLKGLCRAAR 511
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK-VYALEQ 485
+ + M K C P+ TF+I+ + ++G+ D+ + LEQ
Sbjct: 512 WEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQ 556
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 143/327 (43%), Gaps = 19/327 (5%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E T+ L+ L ++ + A +V +M + G EP Y ++ + +D+A
Sbjct: 325 PNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRL 384
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRF----ELIETLYQDMDERSVTPNTVTQNIVL 257
LN M C+PD ++ ++K A R+ ELI +++D +T NI++
Sbjct: 385 LNSMV----CKPDALGFNAVLKGFCRAERWHDASELIAQMFRD----DCPLIEMTFNILI 436
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
+ G+ + +V M C PD+ T +++L+ F+ +G V++ + FR+
Sbjct: 437 DTLCQNGLVNYATQVFEQM-PRYRCTPDIVTYSSLLNGFSEQGLVEVA---IQLFRSMPC 492
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P+ ++N ++ + ++ ++ M P T+N +I + G
Sbjct: 493 KPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIE 552
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
EQM G D T+ LING++ G ++ +++L S + + YN+ +
Sbjct: 553 VLEQMPNYGSTPDIFTYNALINGFSEQG---RLDDALKLLSTMSCKPDAISYNSTLKGLC 609
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETF 464
+A+ + E + M C P+ TF
Sbjct: 610 RAERWQDAEELVAEMLRNKCTPNEVTF 636
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 137/327 (41%), Gaps = 40/327 (12%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
YTAL+ YCR+ +D+A + M PD YTY+T++K A ++E E L +M
Sbjct: 161 YTALIDGYCRSGRLDDALRLIASMPV----APDTYTYNTVLKGLCIAKKWEEAEELMAEM 216
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
PN VT + + + G+ D+ ++L M C PDV +T+++ F+ +G
Sbjct: 217 IRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYG-CTPDVVIYSTLINGFSEQGH 275
Query: 302 VD--------------------------MMERWYE------KFRNFGIDPETRTFNILIG 329
VD + ERW + + G P TF++LI
Sbjct: 276 VDQALDLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLIS 335
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+ + + D V+E M K + YN +I + S+ G ++ +++ K
Sbjct: 336 SLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERG---RVDDALRLLNSMVCKP 392
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
D F ++ G+ A +H + + +N +I + + +V+
Sbjct: 393 DALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVF 452
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGM 476
++M C PD T+S + ++++G+
Sbjct: 453 EQMPRYRCTPDIVTYSSLLNGFSEQGL 479
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 99/236 (41%), Gaps = 9/236 (3%)
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYE 310
V+ N ++ GY + G ERVL AT +V T ++ + G++D R
Sbjct: 125 VSHNTLVAGYCRDGRLADAERVLGA--ARATGAANVVTYTALIDGYCRSGRLDDALRL-- 180
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
+ + P+T T+N ++ + +++ +M M + + P T+ I +F G
Sbjct: 181 -IASMPVAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNG 239
Query: 371 DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYN 430
+QM G D + LING++ G V ++ L + + N YN
Sbjct: 240 LLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQG---HVDQALDLLNTMLCKPNTVCYN 296
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK-VYALEQ 485
A + A+ ++ + M K C P+ TFS++ + + + D V LEQ
Sbjct: 297 AALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQ 352
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 13/161 (8%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A+Q+F + +P +Y +L L ++ + E A ++ EMV + P + L+
Sbjct: 483 AIQLFRSMP----CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILI 538
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPN--CQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
+ C+ L+D A L QM PN PD++TY+ LI + R + L M
Sbjct: 539 NSLCQKGLVDRAIEVLEQM---PNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM--- 592
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
S P+ ++ N L G +A + E +++ ML + C P+
Sbjct: 593 SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRN-KCTPN 632
>gi|297839351|ref|XP_002887557.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333398|gb|EFH63816.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 845
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 154/332 (46%), Gaps = 4/332 (1%)
Query: 116 SDHVLKK--QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE 173
++ VLK+ + AL F LK QP ++ TY ++ LG++ Q ++ +EMV++
Sbjct: 319 ANQVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINRLLDEMVKD 378
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
G +P Y L+ +Y R + ++EA QM+ C+PD TY TLI A ++
Sbjct: 379 GCKPNTVTYNRLIHSYGRANYLNEAMNVFKQMQE-AGCEPDRVTYCTLIDIHAKAGFLDI 437
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
+YQ M ++P+T T ++++ GKAG R+ M+ C P++ T N ++
Sbjct: 438 AMDMYQRMQAAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQG-CTPNLVTFNIMI 496
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
++ A + + Y +N G P+ T++I++ G ++ V M++ +
Sbjct: 497 ALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV 556
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
Y +++ + G+ + +++M G++ + T L++ + + +
Sbjct: 557 PDEPVYGLLVDLWGKAGNVEKAWQWYQEMLHAGLRPNVPTCNSLLSTFLRVHRMSEAYNL 616
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEM 445
++ L + ++ Y ++S C A +M
Sbjct: 617 LQSMLALGLHPSLQTYTLLLSCCTDARSNFDM 648
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 135/320 (42%), Gaps = 5/320 (1%)
Query: 72 EYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWF--QALQ 129
++ G + T++ G + + + L+ K NTV H + + +A+
Sbjct: 346 KHDGHTYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYNRLIHSYGRANYLNEAMN 405
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
VF+ ++E +P TY L+ + K+G ++A ++ M G+ P Y+ ++
Sbjct: 406 VFKQMQEAGC-EPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSPDTFTYSVIINCL 464
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
+ + A +M C P++ T++ +I A +E LY+DM P+
Sbjct: 465 GKAGHLPAAHRLFCEM-VGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 523
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
VT +IV+ G G ++ E V + M + PD ++ ++ G V+ +WY
Sbjct: 524 KVTYSIVMEVLGHCGFLEEAEGVFAEM-QRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWY 582
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
++ + G+ P T N L+ + + + ++++ M L + TY ++ +D
Sbjct: 583 QEMLHAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDA 642
Query: 370 GDAKHMEYTFEQMHAEGMKA 389
M + + M G A
Sbjct: 643 RSNFDMGFCGQLMAVSGHPA 662
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 98/242 (40%), Gaps = 1/242 (0%)
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
T ++G G+A F + R+L M++ CKP+ T N ++ + ++ +++
Sbjct: 351 TYTTMVGNLGRAKQFGAINRLLDEMVKDG-CKPNTVTYNRLIHSYGRANYLNEAMNVFKQ 409
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
+ G +P+ T+ LI + K D + + M+ + TY+ +I G
Sbjct: 410 MQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSPDTFTYSVIINCLGKAGH 469
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNA 431
F +M +G + TF +I +A A + + R + Y+
Sbjct: 470 LPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSI 529
Query: 432 VISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQML 491
V+ L E E V+ M+ K+ PD + ++ + + K G +K + QE L
Sbjct: 530 VMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQEMLHAG 589
Query: 492 LE 493
L
Sbjct: 590 LR 591
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 2/189 (1%)
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
D + N +L N W + R G + T+ ++G G+ + + ++ ++
Sbjct: 315 DAYQANQVLKQMDNYANALGFFYWLK--RQPGFKHDGHTYTTMVGNLGRAKQFGAINRLL 372
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
+ M K + TYN +I ++ F+QM G + D T+C LI+ +A A
Sbjct: 373 DEMVKDGCKPNTVTYNRLIHSYGRANYLNEAMNVFKQMQEAGCEPDRVTYCTLIDIHAKA 432
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
G + + ++ + Y+ +I+ KA L R++ M + C P+ TF
Sbjct: 433 GFLDIAMDMYQRMQAAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTF 492
Query: 465 SIMTEAYAK 473
+IM +AK
Sbjct: 493 NIMIALHAK 501
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 9/211 (4%)
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
K D T T++ Q + R ++ G P T T+N LI +YG+ ++ +
Sbjct: 346 KHDGHTYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYNRLIHSYGRANYLNEAMN 405
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
V + M++ TY +I+ + G +++M A G+ DT T+ +IN
Sbjct: 406 VFKQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSPDTFTYSVIINCLG 465
Query: 403 NAGLFHKVISSVRLASKL---QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
AG + ++ RL ++ N+ +N +I+ KA + ++Y+ M+ +P
Sbjct: 466 KAG---HLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQP 522
Query: 460 DSETFSIMTEAYAKEGM---NDKVYALEQEK 487
D T+SI+ E G + V+A Q K
Sbjct: 523 DKVTYSIVMEVLGHCGFLEEAEGVFAEMQRK 553
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 172/365 (47%), Gaps = 7/365 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL + L Q F Q + +Y L+ L K+G+ + ++ ++ ++P +Y +
Sbjct: 145 KALYFHDQLVAQGF-QLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTI 203
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + C+N L+ +A ++M + PDV TY+TLI + +L +M ++
Sbjct: 204 INSLCKNKLLGDACDVYSEM-IVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKN 262
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ PN T NI++ K G + + +L+ M++ A KPDV+T N+++ + +V
Sbjct: 263 INPNVCTFNILIDALSKEGKMKEAKILLAVMMK-ACIKPDVFTYNSLIDGYFLVDEVKHA 321
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ + G+ P+ + + +I K +M D+ S+ E M+ TYN++I+
Sbjct: 322 KYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDG 381
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH--KVISSVRLASKLQIA 423
+ ++M +G++ D ++ L++G +G K I LA +
Sbjct: 382 LCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHL- 440
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
NV Y +I+ KA E + +M++K C PD+ TF I+ A ++ NDK +
Sbjct: 441 -NVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKI 499
Query: 484 EQEKL 488
+E +
Sbjct: 500 LREMI 504
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 131/314 (41%), Gaps = 2/314 (0%)
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
LA VF +++ G P L+ C I +A +Q+ Q D +Y TL
Sbjct: 110 LAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQL-VAQGFQLDQVSYGTL 168
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
I + + L + ++ SV P+ V N ++ K + V S M+
Sbjct: 169 INGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGI 228
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
PDV T T++ F G + + + I+P TFNILI A K+ +
Sbjct: 229 -SPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAK 287
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
++ M K TYN++I+ + + + KH +Y F M G+ D + + +ING
Sbjct: 288 ILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGL 347
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
+ + +S + ++ YN++I K L + KRMKE+ +PD
Sbjct: 348 CKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDV 407
Query: 462 ETFSIMTEAYAKEG 475
+++I+ + K G
Sbjct: 408 YSYTILLDGLCKSG 421
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 85/203 (41%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P + N ILS N + +++F GI P+ T +ILI + + SV
Sbjct: 55 PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ K F + T N +I+ G+ K Y +Q+ A+G + D ++ LING
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
G V +R + +V YN +I++ K L + VY M K PD T
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234
Query: 464 FSIMTEAYAKEGMNDKVYALEQE 486
++ + + G + ++L E
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNE 257
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 111/276 (40%), Gaps = 5/276 (1%)
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
PD+ T S LI L +++ ++ +R PN +T N ++ G G ++++
Sbjct: 90 PDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRG---EIKKA 146
Query: 273 L--SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
L L + + D + T+++ G+ + R K + P+ +N +I +
Sbjct: 147 LYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINS 206
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
K ++ V M TY +I F MG K +M + + +
Sbjct: 207 LCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPN 266
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
TF LI+ + G + + + K I +V YN++I D++ + V+
Sbjct: 267 VCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFY 326
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
M ++ PD + ++ M K M D+ +L +E
Sbjct: 327 SMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEE 362
>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 166/333 (49%), Gaps = 5/333 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSG--QPELARKVFNEMVEEGIEPTPE 180
++ A Q+ + +++Q +P ++ L+ KSG +A ++ +E+ + G+ P
Sbjct: 9 RFDDARQLLDAMRDQDI-EPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPDAI 67
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
Y L++A + S +D+A +M C+PD++TY+ ++ + + E ++++
Sbjct: 68 TYNTLISACSQGSNLDDAVAVFEEM-IASECRPDLWTYNAMVSVHGRCGKAQEAELMFKE 126
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
+ E+ P+ VT N +L + K G +++ERV +++ A + D T NT++ ++ G
Sbjct: 127 LVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVK-AGFRKDGITYNTMIHMYGKMG 185
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
++D+ Y++ R G P+ T+ +L+ + GK + V+E M T T++
Sbjct: 186 RLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFS 245
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+I A++ G E TF++M G+K D + +++ +A + K++ R K
Sbjct: 246 ALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKD 305
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+ Y +++A K ++ E+E V + M+
Sbjct: 306 GYKPDDGLYQVLLAALAKGNEHDEIEGVIQDME 338
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 155/340 (45%), Gaps = 18/340 (5%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL--PNCQP 213
+SG+ + AR++ + M ++ IEP + L+ A ++ + A V L + + +P
Sbjct: 6 RSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCL-AAGVALELLHEVRQAGLRP 64
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
D TY+TLI AC + ++++M P+ T N ++ +G+ G + E +
Sbjct: 65 DAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMF 124
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
++E +PD T N++L FA +G V+ +ER E+ G + T+N +I YGK
Sbjct: 125 KELVEKGF-QPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGK 183
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
D + + MR + + TY ++++ M E+M G+K T
Sbjct: 184 MGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVT 243
Query: 394 FCCLINGYANAG-------LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
F LI YA +G F +++ S +L Y ++ ++D+ ++
Sbjct: 244 FSALICAYAKSGRQDDAERTFDRMVESGVKPDRLA-------YLVMLDVFARSDETRKLM 296
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+Y+ M + +PD + ++ A AK +D++ + Q+
Sbjct: 297 VLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQD 336
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 94/233 (40%), Gaps = 40/233 (17%)
Query: 257 LGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM---MERWYEKFR 313
+G Y ++G FD ++L M + +PD+ + NT+++ A G + +E +E R
Sbjct: 1 MGVYARSGRFDDARQLLDAMRDQ-DIEPDLVSFNTLINARAKSGCLAAGVALELLHE-VR 58
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
G+ P+ T+N LI A + D +V E M + TYN ++ G A+
Sbjct: 59 QAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQ 118
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
E F+++ +G + D T YN+++
Sbjct: 119 EAELMFKELVEKGFQPDAVT-----------------------------------YNSLL 143
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
A K D+ +ERV + + + R D T++ M Y K G D L E
Sbjct: 144 YAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDE 196
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 154/338 (45%), Gaps = 4/338 (1%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
K G A +F EM +G+EPT +T+L++ YC++ + +AF N+M P+V
Sbjct: 447 KFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMID-NGITPNV 505
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
YT++ LI + L+ ++ ER + P VT N+++ GY + G D+ +L
Sbjct: 506 YTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLED 565
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK- 334
M + PD +T ++S + G+V + + + + ++ L+ Y ++
Sbjct: 566 MHQKGLV-PDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEG 624
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
R+ + +S+ E +++ + +I+ D K + MH +G++ D +
Sbjct: 625 RLMEALSASCEMIQR-GINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIY 683
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
+I+ Y+ G F K L + NV Y A+++ KA ++ ++KRM+
Sbjct: 684 TSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQA 743
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLL 492
+ P+S T+ + KEG + L L+ LL
Sbjct: 744 ANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLL 781
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 160/397 (40%), Gaps = 39/397 (9%)
Query: 121 KKQWFQA-LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
+ Q F+A +Q+ + + E F P E L+ L K G+ + A ++ ++ G P
Sbjct: 307 RLQQFEAGIQLMDEMVELGF-SPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNL 365
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+Y AL+ + C+ +D+A + + M +L N +P+ TYS LI + + R ++ + +
Sbjct: 366 FVYNALINSLCKGGDLDKAELLYSNM-SLMNLRPNGITYSILIDSFCRSGRLDVAISYFD 424
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
M + + N ++ G K G E + M +P T +++S +
Sbjct: 425 RMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGV-EPTATTFTSLISGYCKD 483
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
QV + Y K + GI P TF LI + S + + + + + T TY
Sbjct: 484 LQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTY 543
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-------------- 405
N +IE + G E MH +G+ DT T+ LI+G + G
Sbjct: 544 NVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHK 603
Query: 406 ------------LFHKVISSVRLASKLQ---------IAENVSFYNAVISACIKADDLME 444
L H RL L I ++ + +I +K D
Sbjct: 604 QNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKT 663
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
+ K M ++ RPD+ ++ M + Y+KEG K +
Sbjct: 664 FFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAF 700
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 164/411 (39%), Gaps = 44/411 (10%)
Query: 117 DHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIE 176
++VL + F A+ + +++ P+ T LL L K + ++F+E V G+
Sbjct: 164 NYVLSSRIFDAVVIVKLMFANNLL-PEVRTLSALLNGLLKVRKFITVWELFDESVNAGVR 222
Query: 177 PTP-----------EL------------------------YTALLAAYCRNSLIDEAFVT 201
P P EL Y L+ C+ + EA V
Sbjct: 223 PDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEA-VE 281
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ + DV TY TL+ +FE L +M E +P + ++ G
Sbjct: 282 VKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLR 341
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G D ++ + P+++ N +++ G +D E Y + P
Sbjct: 342 KQGKIDDAYELVVKVGRFGFV-PNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNG 400
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T++ILI ++ + D S + M + T YN++I GD E F +
Sbjct: 401 ITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIE 460
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL---QIAENVSFYNAVISACIK 438
M +G++ TF LI+GY +V + +L +K+ I NV + A+IS
Sbjct: 461 MTNKGVEPTATTFTSLISGYCKD---LQVQKAFKLYNKMIDNGITPNVYTFTALISGLCS 517
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ + E ++ + E+ +P T++++ E Y ++G DK + L ++ Q
Sbjct: 518 TNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQ 568
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 147/382 (38%), Gaps = 36/382 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ L + + A ++F+E+VE I+PT Y L+ YCR+ ID+AF
Sbjct: 503 PNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFEL 562
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L M PD YTY LI R + D+ +++V N + + +L GY
Sbjct: 563 LEDMHQ-KGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYC 621
Query: 262 KAG-----MFDQMERVLSGMLESATC-----------------------------KPDVW 287
+ G + E + G+ C +PD
Sbjct: 622 QEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNV 681
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
+++ ++ +G ++ P T+ L+ K D+ + + M
Sbjct: 682 IYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRM 741
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
+ P S TY ++ + G+ K M +G+ A+T T +I G+ G F
Sbjct: 742 QAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAM-LKGLLANTVTHNIIIRGFCKLGRF 800
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
H+ + ++ I + Y+ +I ++ ++ +++ M + PD ++++
Sbjct: 801 HEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLL 860
Query: 468 TEAYAKEGMNDKVYALEQEKLQ 489
G DK + L + L+
Sbjct: 861 IYGCCVNGELDKAFELRDDMLR 882
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
K G+ A KV +EM E GI P Y+ L+ YCR+ + + + M +PD+
Sbjct: 796 KLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLN-RGLEPDL 854
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
Y+ LI C + L DM R + P+
Sbjct: 855 VAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 167/372 (44%), Gaps = 10/372 (2%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
LK Q +AL + L Q F Q + +Y L+ + K G A K ++ +P
Sbjct: 141 LKGQVKKALHFHDKLLAQGF-QLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDV 199
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+Y ++ A C+ L+ EA+ ++M + DV TY+TLI + + L
Sbjct: 200 VMYNTIIDAMCKYQLVSEAYGLFSEM-AVKGISADVVTYNTLIYGFCIVGKLKEAIGLLN 258
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
+M +++ PN T NI++ K G + + VL+ ML+ A KPDV T +T++ +
Sbjct: 259 EMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLK-ACVKPDVITYSTLMDGYFLV 317
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
+V + + G+ P+ T+ ILI + K +M D+ ++ + M + TY
Sbjct: 318 YEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTY 377
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+++I+ G ++ ++M G AD T+ LI+G G + I+
Sbjct: 378 SSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKD 437
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+I N+ + ++ K L + + V++ + K + T+++M + K+G
Sbjct: 438 QEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQG---- 493
Query: 480 VYALEQEKLQML 491
L +E L ML
Sbjct: 494 ---LLEEALTML 502
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 93/192 (48%), Gaps = 3/192 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F+ + ++ P TY L+ L KSG+ + +EM + G Y++L
Sbjct: 357 EALNLFKEMHQKNMV-PGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSL 415
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+N +D A N+MK +P+++T++ L+ R + + ++QD+ +
Sbjct: 416 IDGLCKNGHLDRAIALFNKMKD-QEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 474
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
N T N+++ G+ K G+ ++ +LS M E C P+ +T TI+ K + D
Sbjct: 475 YHLNVYTYNVMINGHCKQGLLEEALTMLSKM-EDNGCIPNAFTFETIIIALFKKDENDKA 533
Query: 306 ERWYEKFRNFGI 317
E+ + G+
Sbjct: 534 EKLLRQMIARGL 545
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 99/260 (38%), Gaps = 36/260 (13%)
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
TP + N +L + K + LS LE +PD+ T+N +++ F + GQ+
Sbjct: 56 TPPIIQFNKILDSFAKMKHYSTAVS-LSHRLELKGIQPDLITLNILINCFCHMGQITFGF 114
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKK-------RMYDKM------------------- 340
K G P+T T N LI K +DK+
Sbjct: 115 SVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGV 174
Query: 341 ------SSVMEYMRKLQFPWTSS---TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
+ ++++RK+ T YN +I+A F +M +G+ AD
Sbjct: 175 CKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADV 234
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
T+ LI G+ G + I + I NV YN ++ A K + E + V
Sbjct: 235 VTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAV 294
Query: 452 MKEKHCRPDSETFSIMTEAY 471
M + +PD T+S + + Y
Sbjct: 295 MLKACVKPDVITYSTLMDGY 314
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 73/192 (38%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P + N IL FA + GI P+ T NILI + SV
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ + K +P + T N +I+ G K + +++ A+G + + ++ LING
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
G I +R +V YN +I A K + E ++ M K D T
Sbjct: 177 IGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVT 236
Query: 464 FSIMTEAYAKEG 475
++ + + G
Sbjct: 237 YNTLIYGFCIVG 248
>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 452
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 170/373 (45%), Gaps = 29/373 (7%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+Q + +Y L+ L K+G+ A +V + ++P +Y+ ++ + C++ L+ +AF
Sbjct: 80 FQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAF 139
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+QM L PDV TY+TL+ C+ R + L+ M +++ P+ T NI++ G
Sbjct: 140 DLYSQM-LLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDG 198
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K G + VL+ M++ + PDV T N+++ + Q + + G+ P
Sbjct: 199 LCKEGEMKKARNVLAVMIKQSV-DPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTP 257
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ +++++I K +M D+ ++++ M + TY+++I+ G
Sbjct: 258 DVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLV 317
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISAC 436
+MH G AD T+ L++ H+V ++ L +K++ I ++ Y ++
Sbjct: 318 NEMHNRGQPADVITYNSLLDALCKN---HQVDKAITLLTKIKDQGIQPDIYTYTILVDGL 374
Query: 437 IKADDLMEMERVYK---------------------RMKEKHCRPDSETFSIMTEAYAKEG 475
K L + + VY+ +M++ C P+ TF I+ A +
Sbjct: 375 CKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRALFEND 434
Query: 476 MNDKVYALEQEKL 488
MNDK L +E +
Sbjct: 435 MNDKAVELLREMI 447
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/282 (17%), Positives = 109/282 (38%), Gaps = 5/282 (1%)
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY---GKAGMF 266
N P ++ + + + V F + +L M+ R + + V NI++ + G+ +
Sbjct: 3 NPTPTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLN 62
Query: 267 DQMERVLS--GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
D+++ L + + + + + T++ G+ + + P +
Sbjct: 63 DKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMY 122
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
+ +I + K ++ + M + TYN ++ +G K F QM
Sbjct: 123 STIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLL 182
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
+ +K D TF L++G G K + + + K + +V YN+++ +
Sbjct: 183 KNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENK 242
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
V+ M + PD ++S+M K M D+ L +E
Sbjct: 243 ATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKE 284
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 156/353 (44%), Gaps = 8/353 (2%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L + G+ E+A ++++M++EG+ P Y AL+ C A
Sbjct: 335 RPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALK 394
Query: 201 TLNQMK---TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVL 257
+ M+ +L N Q TY+ +IK E L++ M + P VT N ++
Sbjct: 395 IFHWMEGHGSLANTQ----TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLI 450
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
GY G + R+L M E+ C+PD WT N ++S F+ G+++ ++++ G+
Sbjct: 451 NGYLTKGNVNNAARLLDLMKENG-CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 509
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
+P ++ LI + K D S+++ M ++ +YN VI S E
Sbjct: 510 NPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEK 569
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
++M +G+ + T+ LI+G G K + N+ Y+++I
Sbjct: 570 ICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 629
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
+ E E + K M+ K PD TF+ + + + G D + L + + M
Sbjct: 630 QEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDM 682
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 36/261 (13%)
Query: 108 VNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
V T + ++ K A ++ +++KE +P E TY +L+ K G+ E A F
Sbjct: 443 VVTYNTLINGYLTKGNVNNAARLLDLMKENG-CEPDEWTYNELVSGFSKWGKLESASFYF 501
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL---PNCQ------------ 212
EMVE G+ P P YTAL+ + ++ +D A L +M+ + PN +
Sbjct: 502 QEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKE 561
Query: 213 -------------------PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQ 253
P+V TY+TLI R + ++ DM++R PN T
Sbjct: 562 NRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTY 621
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
+ ++ G + G D+ E +L M E PD T +++ F G++D +
Sbjct: 622 SSLIYGLCQEGKADEAEILLKEM-ERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMV 680
Query: 314 NFGIDPETRTFNILIGAYGKK 334
+ G P RT+++L+ K+
Sbjct: 681 DMGCKPNYRTYSVLLKGLQKE 701
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/384 (20%), Positives = 156/384 (40%), Gaps = 28/384 (7%)
Query: 111 VAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEM 170
VAE + H K +Q F + ++PFY+ ++ +L N +
Sbjct: 78 VAEIVAVH---KDTESVIQFFYWISKRPFYKHNMNCFISML----------------NRL 118
Query: 171 VEEGIEPTPELYTALLAAYCRNSL-IDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM 229
V + + + L+ CRN I LN++ + +Y+ +TL+ +
Sbjct: 119 VRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGM-GFGFSLYSCNTLL---IQLA 174
Query: 230 RFELIE---TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
+FE++E LY+ M + P+ +T N ++ K G + E +LS + + PDV
Sbjct: 175 KFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDL-SPDV 233
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
+T +++ +D+ +++ G DP + T++ LI + D+ ++E
Sbjct: 234 FTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEE 293
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M + T TY I A + + +M G + + +T+ LI+G + G
Sbjct: 294 MIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGK 353
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
I K + N YNA+I+ +++ M+ +++T++
Sbjct: 354 LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNE 413
Query: 467 MTEAYAKEGMNDKVYALEQEKLQM 490
+ + G +K L ++ L+M
Sbjct: 414 IIKGLCLGGDIEKAMVLFEKMLKM 437
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 156/349 (44%), Gaps = 3/349 (0%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL+V + L QP TY L+ G + A K+ +EM+ G++P Y ++
Sbjct: 208 ALKVLDQLLSDN-CQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTII 266
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
C+ ++D AF + ++ L C+PDV +Y+ L++A ++ ++E E L M
Sbjct: 267 RGMCKEGMVDRAFEMIRNLE-LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 325
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PN VT +I++ + G ++ +L M E PD ++ + +++ F +G++D+
Sbjct: 326 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL-TPDAYSYDPLIAAFCREGRLDVAI 384
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ E + G P+ +N ++ K D+ + + ++ SS+YN + A
Sbjct: 385 EFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 444
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
GD + +M + G+ D T+ +I+ G+ K + + +V
Sbjct: 445 WSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSV 504
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
YN V+ KA + + V M CRP+ T++++ E G
Sbjct: 505 VTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAG 553
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 160/358 (44%), Gaps = 4/358 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A++V E+L++ F QP Y L+ K + + A +V + M + P Y +
Sbjct: 138 KAVRVMEILEK--FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIM 195
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + C +D A L+Q+ + NCQP V TY+ LI+A + + L +M R
Sbjct: 196 IGSLCSRGKLDLALKVLDQLLS-DNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRG 254
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+ T N ++ G K GM D+ ++ LE C+PDV + N +L N+G+ +
Sbjct: 255 LKPDMFTYNTIIRGMCKEGMVDRAFEMIRN-LELKGCEPDVISYNILLRALLNQGKWEEG 313
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E+ K + DP T++ILI + ++ ++++ M++ + +Y+ +I A
Sbjct: 314 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 373
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
F G E M ++G D + ++ G + + ++ + N
Sbjct: 374 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 433
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
S YN + SA + D + + M PD T++ M +EGM DK + L
Sbjct: 434 SSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFEL 491
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 109/244 (44%), Gaps = 4/244 (1%)
Query: 234 IETLY--QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNT 291
IE+L+ + M + P+ + ++ G+ + RV+ +LE +PDV+ N
Sbjct: 102 IESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVME-ILEKFG-QPDVFAYNA 159
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
+++ F ++D R ++ R+ P+T T+NI+IG+ + D V++ +
Sbjct: 160 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDN 219
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
T TY +IEA G ++M + G+K D T+ +I G G+ +
Sbjct: 220 CQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 279
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
+R +V YN ++ A + E E++ +M + C P+ T+SI+
Sbjct: 280 EMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 339
Query: 472 AKEG 475
++G
Sbjct: 340 CRDG 343
>gi|255583688|ref|XP_002532598.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527686|gb|EEF29795.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 553
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 168/356 (47%), Gaps = 10/356 (2%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K+W Q+ E ++ Q ++ E + L+ GK G A KV + M + G P
Sbjct: 118 KKWHLVSQILEWVRTQSWWDFNEMDSLMLITAYGKQGNFSAAEKVLSYMNKMGYVPNVVS 177
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRF----ELIETL 237
+TAL+ AY R + + A +M++ +P TY ++K V+ +F E+ ETL
Sbjct: 178 HTALMEAYGRGARYNNAEAIFRRMQS-SGPKPSAVTYQIILKNFVEGNKFKEAEEVFETL 236
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
D ++ + P+ ++++ + KAG +++ ++ + M + K V T N+++S
Sbjct: 237 L-DEEKSPLKPDQKMFHMMIYMHRKAGNYEKARQIFALMTQRGVPKSTV-TYNSLMSFET 294
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
N +V + Y++ + G+ P+ ++ +LI AYGK R D+ +V E M T
Sbjct: 295 NYKEVSKI---YDQMQRSGLQPDVISYALLINAYGKARREDEALAVFEEMLDAGVRPTHK 351
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
YN +++AF+ G + F+ M + D ++ +++ Y NA +
Sbjct: 352 AYNILLDAFAISGMVEQARTVFKSMRRDRYTPDLCSYTTMLSAYVNASDMAGAENFFNRL 411
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ + NV Y A+I K ++L +M Y+ M+ + + + F+ + +AY K
Sbjct: 412 KQDGLEPNVVTYGALIKGYAKTNNLDKMMEKYEEMQLRGVKANQTIFTTIMDAYGK 467
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 135/321 (42%), Gaps = 42/321 (13%)
Query: 126 QALQVFEML--KEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
+A +VFE L +E+ +P + + ++ + K+G E AR++F M + G+ + Y
Sbjct: 228 EAEEVFETLLDEEKSPLKPDQKMFHMMIYMHRKAGNYEKARQIFALMTQRGVPKSTVTYN 287
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
+L++ + + + +QM+ QPDV +Y+ LI A A R + ++++M +
Sbjct: 288 SLMSFETNYKEVSKIY---DQMQR-SGLQPDVISYALLINAYGKARREDEALAVFEEMLD 343
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
V P NI+L + +GM +Q V M PD+ + T+LS + N +
Sbjct: 344 AGVRPTHKAYNILLDAFAISGMVEQARTVFKSMRRDRYT-PDLCSYTTMLSAYVNASDMA 402
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
E ++ + + G++P T+ LI Y K DKM
Sbjct: 403 GAENFFNRLKQDGLEPNVVTYGALIKGYAKTNNLDKM----------------------- 439
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
ME +E+M G+KA+ F +++ Y F + + + +
Sbjct: 440 -----------ME-KYEEMQLRGVKANQTIFTTIMDAYGKNKDFGSAVIWYKEMEQYGVP 487
Query: 424 ENVSFYNAVISACIKADDLME 444
+ N ++S AD+ E
Sbjct: 488 PDQKAKNILLSLAKTADEQKE 508
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 113/253 (44%), Gaps = 17/253 (6%)
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMER--VLSGMLESATCKPDVWTMN-----TILSVFAN 298
+ ++ +++VLG + F Q+++ ++S +LE + W N +++ +
Sbjct: 97 INNQSLPKHLVLGTLVR---FKQLKKWHLVSQILEWVRTQ-SWWDFNEMDSLMLITAYGK 152
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
+G E+ G P + L+ AYG+ Y+ ++ M+ ++ T
Sbjct: 153 QGNFSAAEKVLSYMNKMGYVPNVVSHTALMEAYGRGARYNNAEAIFRRMQSSGPKPSAVT 212
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAE---GMKADTKTFCCLINGYANAGLFHKVISSVR 415
Y +++ F + K E FE + E +K D K F +I + AG + K
Sbjct: 213 YQIILKNFVEGNKFKEAEEVFETLLDEEKSPLKPDQKMFHMMIYMHRKAGNYEKARQIFA 272
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
L ++ + ++ YN+++S + E+ ++Y +M+ +PD +++++ AY K
Sbjct: 273 LMTQRGVPKSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVISYALLINAYGKAR 329
Query: 476 MNDKVYALEQEKL 488
D+ A+ +E L
Sbjct: 330 REDEALAVFEEML 342
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 164/329 (49%), Gaps = 5/329 (1%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSG--QPELARKVFNEMVEEGIEPTPELYTA 184
A Q+ + +++Q +P ++ L+ KSG +A ++ +E+ + G+ P Y
Sbjct: 80 ARQLLDAMRDQDI-EPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPDAITYNT 138
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L++A + S +D+A +M C+PD++TY+ ++ + + E +++++ E+
Sbjct: 139 LISACSQGSNLDDAVAVFEEM-IASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEK 197
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
P+ VT N +L + K G +++ERV +++ A + D T NT++ ++ G++D+
Sbjct: 198 GFQPDAVTYNSLLYAFAKEGDVERVERVCEELVK-AGFRKDGITYNTMIHMYGKMGRLDL 256
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
Y++ R G P+ T+ +L+ + GK + V+E M T T++ +I
Sbjct: 257 ALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALIC 316
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
A++ G E TF++M G+K D + +++ +A + K++ R K
Sbjct: 317 AYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKP 376
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMK 453
+ Y +++A K ++ E+E V + M+
Sbjct: 377 DDGLYQVLLAALAKGNEHDEIEGVIQDME 405
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 144/313 (46%), Gaps = 12/313 (3%)
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-----CVDA-MR 230
PT +++ A++ Y R+ D+A L+ M+ + +PD+ +++TLI A C+ A +
Sbjct: 59 PTVQVFNAMMGVYARSGRFDDARQLLDAMRD-QDIEPDLVSFNTLINARAKSGCLAAGVA 117
Query: 231 FELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMN 290
EL+ + Q + P+ +T N ++ + D V M+ S C+PD+WT N
Sbjct: 118 LELLHEVRQ----AGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIAS-ECRPDLWTYN 172
Query: 291 TILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
++SV G+ E +++ G P+ T+N L+ A+ K+ +++ V E + K
Sbjct: 173 AMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKA 232
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
F TYN +I + MG +++M A G D T+ L++ +
Sbjct: 233 GFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEA 292
Query: 411 ISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
+ + + + ++A+I A K+ + ER + RM E +PD + +M +
Sbjct: 293 GKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDV 352
Query: 471 YAKEGMNDKVYAL 483
+A+ K+ L
Sbjct: 353 FARSDETRKLMVL 365
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 160/354 (45%), Gaps = 18/354 (5%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P + ++ + +SG+ + AR++ + M ++ IEP + L+ A ++ + A V
Sbjct: 59 PTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCL-AAGVA 117
Query: 202 LNQMKTL--PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L + + +PD TY+TLI AC + ++++M P+ T N ++
Sbjct: 118 LELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSV 177
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+G+ G + E + ++E +PD T N++L FA +G V+ +ER E+ G
Sbjct: 178 HGRCGKAQEAELMFKELVEKGF-QPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRK 236
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ T+N +I YGK D + + MR + + TY ++++ M
Sbjct: 237 DGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVL 296
Query: 380 EQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISSVRLASKLQIAENVSFYNAV 432
E+M G+K TF LI YA +G F +++ S +L Y +
Sbjct: 297 EEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLA-------YLVM 349
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ ++D+ ++ +Y+ M + +PD + ++ A AK +D++ + Q+
Sbjct: 350 LDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQD 403
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 158/371 (42%), Gaps = 52/371 (14%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K W QA + LK++ + + L+ +SG E AR +F+ M+++G PT E
Sbjct: 602 KLWQQAENFVKGLKQESGVDRR--IWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVES 659
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
++ A + +DE +V + +++ L + + T +++A A + +Y M
Sbjct: 660 VNGMMRALIVDGRLDELYVVVQELQDL-DIKISKSTVLLMLEAFAKAGDVFEVMKIYNGM 718
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
PN I++ F +E +++ M E A KPD+ +NT+L ++ G
Sbjct: 719 KAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEM-EGAGFKPDLVVLNTLLLMYTGTGN 777
Query: 302 VDMMERWYEKF--------------------RNF---------------GIDPETRTFNI 326
D Y RNF G+ P+ ++ I
Sbjct: 778 FDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKI 837
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
L+ A GK +++++ + E MR + S Y+ +++ + + + E+ M +G
Sbjct: 838 LLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDG 897
Query: 387 MKADTKTFCCLINGYANAGL---FHKVISSVRLASKLQIAENVSFYNAVISACIKADD-- 441
++ T L+ Y +G KV++S++ +S L+I+ Y+ V+ A ++ D
Sbjct: 898 IEPTIATMHILMTSYGTSGHPDEAEKVLNSLK-SSNLEIS--TLPYSTVLDAYLRNRDYS 954
Query: 442 -----LMEMER 447
L+EM+R
Sbjct: 955 LGITKLLEMKR 965
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 10/133 (7%)
Query: 350 LQFPW--TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN---- 403
L+FP T +N ++ ++ G + M + ++ D +F LIN A
Sbjct: 53 LRFPHLPTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCL 112
Query: 404 -AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
AG+ +++ VR A + + YN +ISAC + +L + V++ M CRPD
Sbjct: 113 AAGVALELLHEVRQAG---LRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLW 169
Query: 463 TFSIMTEAYAKEG 475
T++ M + + G
Sbjct: 170 TYNAMVSVHGRCG 182
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 75/375 (20%), Positives = 146/375 (38%), Gaps = 48/375 (12%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P Y+ +L + +S + ++ M+++G +P LY LLAA + + DE
Sbjct: 340 KPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEG 399
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+ M+ + P V + S LIKA C+ L Q + P+ + +L
Sbjct: 400 VIQDMEAVFEMNPLVIS-SILIKAECISQGASLLKRACLQGYE-----PDGKSLLSILDA 453
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYE----KFRNF 315
Y K G ++ +L + + ++ + +I+ + N VD ++ + K +F
Sbjct: 454 YEKMGKHEKGLSLLEWIRQHVPNSHNLISECSIMLLCKNGKIVDAIQEYSRKQMLKRGSF 513
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI----------EA 365
G D + + LI + ++ + V M+ L + Y ++I A
Sbjct: 514 GQDCD--LYEYLITYLEEAELFPEACQVFCDMQFLGIVPSQKIYQSIIYTCCRLGFPETA 571
Query: 366 FSDMGDAKHMEYTFEQMH---------------------AEGMK----ADTKTFCCLING 400
+ M DA + + + +G+K D + + LI+
Sbjct: 572 YQLMDDAARSDISLNILSCRVAMIEAYGKLKLWQQAENFVKGLKQESGVDRRIWNALIHA 631
Query: 401 YANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
YA +GL+ + + K V N ++ A I L E+ V + +++ +
Sbjct: 632 YAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKIS 691
Query: 461 SETFSIMTEAYAKEG 475
T +M EA+AK G
Sbjct: 692 KSTVLLMLEAFAKAG 706
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 73/176 (41%), Gaps = 23/176 (13%)
Query: 49 TNKHTSFSSESAVAAKKRLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWV 108
T K S+ A + K +LW++ + E GYR R+ I ++ K+ R A+ +
Sbjct: 829 TPKLESYKILLAASGKAKLWEQADLL-FEEMRTKGYRLNRS-IYHMMMKIYRNARNHS-- 884
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
+A + +KE +P T L+ G SG P+ A KV N
Sbjct: 885 -----------------KAEHLLSAMKEDGI-EPTIATMHILMTSYGTSGHPDEAEKVLN 926
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
+ +E + Y+ +L AY RN L +MK +PD +++ I+A
Sbjct: 927 SLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKR-DGVEPDHQVWTSFIRA 981
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 61/318 (19%), Positives = 114/318 (35%), Gaps = 45/318 (14%)
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+LY L+ L EA M+ L P Y ++I C R ET YQ
Sbjct: 518 DLYEYLITYLEEAELFPEACQVFCDMQFL-GIVPSQKIYQSIIYTCC---RLGFPETAYQ 573
Query: 240 DMDERS---VTPNTVTQNI-VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
MD+ + ++ N ++ + ++ YGK ++ Q E + G+ + +
Sbjct: 574 LMDDAARSDISLNILSCRVAMIEAYGKLKLWQQAENFVKGLKQES--------------- 618
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
G+D R +N LI AY + +Y+ ++ + M K T
Sbjct: 619 --------------------GVD--RRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPT 656
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
+ N ++ A G + +++ +K T ++ +A AG +V+
Sbjct: 657 VESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYN 716
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
N+ Y +IS ++E + M+ +PD + + Y G
Sbjct: 717 GMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTG 776
Query: 476 MNDKVYALEQEKLQMLLE 493
D+ + L+ LE
Sbjct: 777 NFDRTIEVYHSILEAGLE 794
>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
Length = 1595
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 145/347 (41%), Gaps = 8/347 (2%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+ P TY L+ LGK G E +F EM + G P ++Y +++ A C +A
Sbjct: 1044 FLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAM 1103
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
V L QM C PD+ T++TLI E ++ R + PN ++ ++ G
Sbjct: 1104 VILKQMFA-SGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHG 1162
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ G +L M+ PDV T ++ G+V EK + P
Sbjct: 1163 FCMRGELMVASDLLVEMMGRGH-TPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFP 1221
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF---SDMGDAKHME 376
+ +N+LI KKRM +++E M + Y +I+ F ++GDA+ +
Sbjct: 1222 DVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKI- 1280
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
FE M +G+ D + +I GY G+ + I + K+ + Y VIS
Sbjct: 1281 --FEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGY 1338
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
K +L R M ++ C+P+ T+S + Y K G D L
Sbjct: 1339 AKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGL 1385
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 139/349 (39%), Gaps = 26/349 (7%)
Query: 145 GTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQ 204
G + LV+ GK + + R+ +M E + P +Y L++ C+ ++ A L +
Sbjct: 1192 GALIHGLVVAGKVSEALIVRE---KMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEE 1248
Query: 205 MKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG 264
M N QPD + Y+TLI + + +++ M+ + V P+ V+ N ++ GY + G
Sbjct: 1249 MLE-KNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFG 1307
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
M + +S M C PD +T T++S +A +G ++ RW P T+
Sbjct: 1308 MMSEAILCMSNM-RKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTY 1366
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
+ LI Y K D + M+ TY +I + FE M
Sbjct: 1367 SSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLL 1426
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSV------------------RLASKLQIAENV 426
+ T L+NG + VI+S+ +L + N
Sbjct: 1427 NHCSPNDVTLHYLVNGLTSCT--PCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRN- 1483
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
S YNA+I + + + L E RM +K P+ TF + + G
Sbjct: 1484 SAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVG 1532
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 164/428 (38%), Gaps = 78/428 (18%)
Query: 98 LERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKS 157
L A +A + + ++D + + A ++ E ++EQ P+ +LL LL +
Sbjct: 900 LAGAAPTRACLGALVAAYADAGMLGK---ATEMCERVREQYGSLPEVTHCNRLLKLLVEQ 956
Query: 158 GQPELARKVFNEM------------------------VEEGIE-----------PTPELY 182
+ + ARK+++EM VEEG++ P Y
Sbjct: 957 RRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFY 1016
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
L+ YCR + + L +M+T P + TY +LI E I +L+ +M
Sbjct: 1017 NVLIDGYCRRGDMGRGLLLLGEMET-NGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMR 1075
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
+R +PN N V+ Q +L M S C PD+ T NT+++ ++G V
Sbjct: 1076 KRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASG-CDPDIITFNTLITGLCHEGHV 1134
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
E + E +R+ P +Y +
Sbjct: 1135 RKAEHFLR----------------------------------EAIRRELNP-NQLSYTPL 1159
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I F G+ +M G D TF LI+G AG + + ++ Q+
Sbjct: 1160 IHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQV 1219
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK-EGMND--K 479
+V+ YN +IS K L + + + M EK+ +PD ++ + + + + E + D K
Sbjct: 1220 FPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARK 1279
Query: 480 VYALEQEK 487
++ + K
Sbjct: 1280 IFEFMEHK 1287
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 125/310 (40%), Gaps = 3/310 (0%)
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
M G PT AL+AAY ++ +A +++ P+V + L+K V
Sbjct: 895 LQSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLV 954
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
+ R++ LY +M + + + +++ G ++ +++ A C P V
Sbjct: 955 EQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARW-GAGCIPHV 1013
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
N ++ + +G + + G P T+ LI GKK +K+ S+
Sbjct: 1014 VFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLE 1073
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
MRK F YN+VI+A + A +QM A G D TF LI G + G
Sbjct: 1074 MRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGH 1133
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISA-CIKADDLMEMERVYKRMKEKHCRPDSETFS 465
K +R A + ++ N Y +I C++ + ++ + + + M H PD TF
Sbjct: 1134 VRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHT-PDVVTFG 1192
Query: 466 IMTEAYAKEG 475
+ G
Sbjct: 1193 ALIHGLVVAG 1202
>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
Length = 581
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 165/388 (42%), Gaps = 46/388 (11%)
Query: 127 ALQVFEMLKEQPF-YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE-GIEPTPELYTA 184
AL VF L P P + +++V+L +SG+ A ++F++M G P +
Sbjct: 124 ALAVFTALHCSPLSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSF 183
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQ-------------------------------- 212
L+++ +L+D + L++ C+
Sbjct: 184 LVSSCTCANLLDASATLLSKASEF-GCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQD 242
Query: 213 ----PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
PDV++++ +IK + + L + M+E +P+TVT NI++ G + +
Sbjct: 243 RLYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSR 302
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
VL + C P+V T +++S + G+++ Y GI P T T+N+LI
Sbjct: 303 GHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLI 362
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
YGK V + M +L+ P T++++I+ + G + M ++
Sbjct: 363 NGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQ 422
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVS----FYNAVISACIKADDLME 444
+ TF +I+ ++ ++RL ++L + +++ YN VI K + E
Sbjct: 423 PNVYTFSIIIHSLCKQ---NRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDE 479
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYA 472
+ K M+EK CRPD T++I+ Y
Sbjct: 480 ANLIRKGMEEKGCRPDKYTYTILIIGYC 507
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 150/368 (40%), Gaps = 53/368 (14%)
Query: 94 LKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVL 153
L K E + +A+ + S + + + + +FE + Y P ++ ++
Sbjct: 201 LSKASEFGCRVEAYAYN--KLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKG 258
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
+ + GQ + A ++ M E G P + ++ CR + + L +++ C P
Sbjct: 259 VCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMP 318
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------MF 266
+V T++++I A + E +Y DM + PNTVT N+++ GYGK G ++
Sbjct: 319 NVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVY 378
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
QM R+ C PDV T ++++ + GQ+D R + I P TF+I
Sbjct: 379 QQMTRL--------RCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSI 430
Query: 327 LIGAYGKKRMYDKMSSVM-EYMRKLQFPWTSSTYNNVIEAFSDMGDA-------KHME-- 376
+I + K+ D+ ++ E + + YN VI+ G K ME
Sbjct: 431 IIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEK 490
Query: 377 --------YT------------------FEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
YT F +M G D+ T C I+ AG+ ++V
Sbjct: 491 GCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEV 550
Query: 411 ISSVRLAS 418
+RLAS
Sbjct: 551 DHVMRLAS 558
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 165/384 (42%), Gaps = 21/384 (5%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQ--PKEGTYMKLLVLLGKSGQPELARKV 166
NT+ + F D + + +AL++ M+ + P +Y ++ GQ + A +
Sbjct: 170 NTLLKGFCD---ENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNL 226
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
F +M ++GI P YT ++ C+ ++D A QM +P++ TY+ LI +
Sbjct: 227 FLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMID-KGVRPNIVTYTCLIHGYL 285
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
+++ + + ++M + P+ T ++L K G + ++ M+ KPDV
Sbjct: 286 SIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGI-KPDV 344
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
IL +A KG + M + + GI P FNI+ A+ KK M + +
Sbjct: 345 SIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNK 404
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF------CCLING 400
MR+ Y +I+A +G E F QM EG+ + F C I+
Sbjct: 405 MRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDK 464
Query: 401 YANAG-LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
+ AG LF ++++ I NV F+N ++ +M+ +R+ M+ RP
Sbjct: 465 WEKAGELFFEMVNQ-------GIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRP 517
Query: 460 DSETFSIMTEAYAKEGMNDKVYAL 483
D +++ + + G D+ L
Sbjct: 518 DIISYNALIRGHCLVGKTDEASKL 541
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 162/382 (42%), Gaps = 22/382 (5%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ +F +++Q P Y L+ L K G+ + A FN+M+ EG+ P ++T+L
Sbjct: 397 EAMDIFNKMRQQGL-SPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSL 455
Query: 186 LAAYCRNSLIDEA----FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+ C ++A F +NQ P+V ++T++ R + L M
Sbjct: 456 VYGLCTIDKWEKAGELFFEMVNQ-----GIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLM 510
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ P+ ++ N ++ G+ G D+ ++L ML S KP+ T NT+L + G+
Sbjct: 511 ERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIML-SVGLKPNECTYNTLLHGYCRDGR 569
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+D +++ + GI P T+N ++ K R + + + M W+ TYN
Sbjct: 570 IDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNI 629
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
++ S F+ + ++ ++ D TF +I G ++ S
Sbjct: 630 ILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANG 689
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG------ 475
+ +V+ Y + I+ L E + ++ M++ C P+S + + G
Sbjct: 690 LVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAG 749
Query: 476 -----MNDKVYALEQEKLQMLL 492
+++K ++LE ML+
Sbjct: 750 AYLSKIDEKNFSLEASTTSMLI 771
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 132/321 (41%), Gaps = 41/321 (12%)
Query: 161 ELARKVFNEMVEEG---IEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
EL FN M+ + + P Y+ L+ +CR ++ F + DV
Sbjct: 73 ELVVSCFNRMIRDCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVV 132
Query: 218 YSTLIKACVDAMRF-ELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
+ L+K DA R E + L + M E TPN V+ N +L G+ ++ +L M
Sbjct: 133 VNRLLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMM 192
Query: 277 LESA--TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
+ +C P++ + NT+++ F +GQVD + + GI P T+ I+I K
Sbjct: 193 ADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKA 252
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
++ D+ V F+QM +G++ + T+
Sbjct: 253 QVVDRAEGV-----------------------------------FQQMIDKGVRPNIVTY 277
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
CLI+GY + G + +V+ ++ S + + Y ++ K E +++ M
Sbjct: 278 TCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIR 337
Query: 455 KHCRPDSETFSIMTEAYAKEG 475
K +PD + I+ YA +G
Sbjct: 338 KGIKPDVSIYGIILHGYATKG 358
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 176/426 (41%), Gaps = 62/426 (14%)
Query: 113 ETFSDHVLKKQWFQALQVFEMLKEQPFYQ----------PKEGTYMKLLVLLGKSGQPEL 162
++F HVL + V L EQ + P T+ LL+LL KS E
Sbjct: 76 DSFPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEK 135
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A +VFNE + ++ + ++ C +D+ F L QM+ + P+V Y+TLI
Sbjct: 136 AWRVFNE-TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEM-GLSPNVVVYTTLI 193
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------MFDQMERVLSG 275
C E + L+ M E V N T +++ G+ K G ++++M+ L+G
Sbjct: 194 DGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMK--LTG 251
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
++ P+V+T N+++ N G+++ +++ R G+ T+N LIG ++R
Sbjct: 252 IV------PNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQER 305
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
+ +M M++ +YN +I+ + +G+ F QM + G T+
Sbjct: 306 RVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYN 365
Query: 396 CLINGYANAG--------------------------LFHKVISSVRLASKLQI------- 422
LI G++ A L ++ S + QI
Sbjct: 366 ILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKA 425
Query: 423 --AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
++ Y +I D+ E +++K + E H +P+ ++ M Y KEG + +
Sbjct: 426 GLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRA 485
Query: 481 YALEQE 486
L +E
Sbjct: 486 LRLLKE 491
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 161/380 (42%), Gaps = 45/380 (11%)
Query: 131 FEMLK--EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAA 188
FE+L E+ P Y L+ K+G E +++F +M E + YT L+
Sbjct: 171 FEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLING 230
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP 248
+ + L + +MK L P+VYTY+++I C + + L+ +M ER V
Sbjct: 231 FFKMGLKKDGIELYEKMK-LTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVAC 289
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW 308
N VT N ++GG + + ER++ M P++ + NT++ + + G +D
Sbjct: 290 NVVTYNTLIGGLCQERRVLEAERLMCRMKRDGL-SPNLISYNTLIDGYCSIGNLDKASSL 348
Query: 309 YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY--------- 359
+ + ++ G P T+NILI + + + ++ ++ M + TY
Sbjct: 349 FNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVR 408
Query: 360 -NNVIEAF----------------------------SDMGDAKHMEYTFEQMHAEGMKAD 390
+N+ +AF DM +A + + ++MH +K +
Sbjct: 409 SDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMH---LKPN 465
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
+ +I GY G ++ + ++ + + NV+ YN+ I K + E E + K
Sbjct: 466 DVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLK 525
Query: 451 RMKEKHCRPDSETFSIMTEA 470
M E +P ++++++A
Sbjct: 526 DMIELGLKPSISIWNMISKA 545
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 112/277 (40%), Gaps = 36/277 (12%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
A ++F+ ++E+ TY L+ L + + A ++ M +G+ P Y L
Sbjct: 274 NAFELFDEMRERGV-ACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTL 332
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ YC +D+A NQMK+ P + TY+ LI +A + + ++M+ R
Sbjct: 333 IDGYCSIGNLDKASSLFNQMKS-SGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARG 391
Query: 246 VTPNTVTQNIVLGGYGKAG-------MFDQMERV-------LSGMLESATC--------- 282
++P+ VT I++ ++ ++ ME+ + G+L C
Sbjct: 392 LSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEAS 451
Query: 283 -----------KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
KP+ NT++ + +G R ++ G+ P ++N I
Sbjct: 452 KLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXIL 511
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD 368
K + + +++ M +L + S +N + +A D
Sbjct: 512 CKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARFD 548
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 176/426 (41%), Gaps = 62/426 (14%)
Query: 113 ETFSDHVLKKQWFQALQVFEMLKEQPFYQ----------PKEGTYMKLLVLLGKSGQPEL 162
++F HVL + V L EQ + P T+ LL+LL KS E
Sbjct: 89 DSFPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEK 148
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A +VFNE + ++ + ++ C +D+ F L QM+ + P+V Y+TLI
Sbjct: 149 AWRVFNE-TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEM-GLSPNVVVYTTLI 206
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------MFDQMERVLSG 275
C E + L+ M E V N T +++ G+ K G ++++M+ L+G
Sbjct: 207 DGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMK--LTG 264
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
++ P+V+T N+++ N G+++ +++ R G+ T+N LIG ++R
Sbjct: 265 IV------PNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQER 318
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
+ +M M++ +YN +I+ + +G+ F QM + G T+
Sbjct: 319 RVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYN 378
Query: 396 CLINGYANAG--------------------------LFHKVISSVRLASKLQI------- 422
LI G++ A L ++ S + QI
Sbjct: 379 ILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKA 438
Query: 423 --AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
++ Y +I D+ E +++K + E H +P+ ++ M Y KEG + +
Sbjct: 439 GLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRA 498
Query: 481 YALEQE 486
L +E
Sbjct: 499 LRLLKE 504
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 161/380 (42%), Gaps = 45/380 (11%)
Query: 131 FEMLK--EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAA 188
FE+L E+ P Y L+ K+G E +++F +M E + YT L+
Sbjct: 184 FEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLING 243
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP 248
+ + L + +MK L P+VYTY+++I C + + L+ +M ER V
Sbjct: 244 FFKMGLKKDGIELYEKMK-LTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVAC 302
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW 308
N VT N ++GG + + ER++ M P++ + NT++ + + G +D
Sbjct: 303 NVVTYNTLIGGLCQERRVLEAERLMCRMKRDGL-SPNLISYNTLIDGYCSIGNLDKASSL 361
Query: 309 YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY--------- 359
+ + ++ G P T+NILI + + + ++ ++ M + TY
Sbjct: 362 FNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVR 421
Query: 360 -NNVIEAF----------------------------SDMGDAKHMEYTFEQMHAEGMKAD 390
+N+ +AF DM +A + + ++MH +K +
Sbjct: 422 SDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMH---LKPN 478
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
+ +I GY G ++ + ++ + + NV+ YN+ I K + E E + K
Sbjct: 479 DVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLK 538
Query: 451 RMKEKHCRPDSETFSIMTEA 470
M E +P ++++++A
Sbjct: 539 DMIELGLKPSISIWNMISKA 558
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 96/240 (40%), Gaps = 35/240 (14%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A ++ M +G+ P Y L+ YC +D+A NQMK+ P + TY+ LI
Sbjct: 323 AERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKS-SGQSPSLATYNILI 381
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------MFDQMERV--- 272
+A + + ++M+ R ++P+ VT I++ ++ ++ ME+
Sbjct: 382 AGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLV 441
Query: 273 ----LSGMLESATC--------------------KPDVWTMNTILSVFANKGQVDMMERW 308
+ G+L C KP+ NT++ + +G R
Sbjct: 442 ADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRL 501
Query: 309 YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD 368
++ G+ P ++N I K + + +++ M +L + S +N + +A D
Sbjct: 502 LKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARFD 561
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 155/345 (44%), Gaps = 22/345 (6%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L SG ++A +F+ M +G+ P Y AL+ N I AFV
Sbjct: 352 EPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFV 411
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKA-CV--DAMRFELIETLYQDMDERSVTPNTVTQNIVL 257
LN M C P++ TY+ +IK C+ D + L+ +M +R + N VT N ++
Sbjct: 412 VLNLMGR-NGCSPNIVTYNEMIKGYCILGDPKKAMLV---MNNMLQRGHSANLVTYNTII 467
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
GY +G R+L ++ CKPD W+ ++ F +++ + + + G+
Sbjct: 468 KGYCDSGNTTSALRILD-LMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 526
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P T+ LI Y K D +S++E+M++ TYN +I + + E
Sbjct: 527 CPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE 586
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISSVRLASKLQIAENVSFYN 430
+ M EG+ + T+ +I+G G +F+K+I L N+ Y+
Sbjct: 587 LCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCL-------PNLLTYS 639
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++I A + + E E ++ ++ PD T+ M EAY G
Sbjct: 640 SLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSG 684
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 145/369 (39%), Gaps = 37/369 (10%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP Y ++ L K G A + ++ E + P YT+++ +CR +D A
Sbjct: 212 QPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQ 271
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
NQM C+P+ TYSTLI D+ R L ++M + P T +
Sbjct: 272 VFNQMAK-EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
G ++ R+ M ++ C+P+V+T ++S G + + + + G+ P
Sbjct: 331 CDMGCYEDAWRLFVDM-KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 389
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T T+N LI + R V+ M + TYN +I+ + +GD K
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN 449
Query: 381 QMHAEGMKADTKTFCCLINGYANAG----------------------LFHKVISSVRLAS 418
M G A+ T+ +I GY ++G + ++I S
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509
Query: 419 KLQ-------------IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
K++ + N Y A+I K + L + + MK CRP+ +T++
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 569
Query: 466 IMTEAYAKE 474
++ K+
Sbjct: 570 VLIHGLTKQ 578
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 101/253 (39%), Gaps = 3/253 (1%)
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
Y M V PN + N V+ K G E ++ + ES PD +T +++
Sbjct: 203 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEM-SPDTFTYTSMILGHC 261
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
K +D + + + G +P T T++ LI G R+ + + E + P T+
Sbjct: 262 RKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILP-TA 320
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
T I A DMG + F M +G + + T+ LI+G +GL I
Sbjct: 321 HTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHR 380
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
S+ + N YNA+I+ ++ + V M C P+ T++ M + Y G
Sbjct: 381 MSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGD 440
Query: 477 NDKVYALEQEKLQ 489
K + LQ
Sbjct: 441 PKKAMLVMNNMLQ 453
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 109/285 (38%), Gaps = 26/285 (9%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL++F + EQ P TY L+ LG+ G+ E A +F E+ G+ P Y ++
Sbjct: 619 ALEMFNKMIEQGCL-PNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMI 677
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
AY + ++ AF L +M CQP ++TY LIK ++ Y D+R
Sbjct: 678 EAYIMSGKVEHAFNFLGRMIK-AGCQPTLWTYGVLIKG---------LKNEYLLADQRLA 727
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
V N +G V+S L V N ++S + G
Sbjct: 728 ALPDVVPNC---SFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAG------ 778
Query: 307 RWYE------KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
RW+E + G+ P+ +N L+ + + R D V ++M + Y
Sbjct: 779 RWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYK 838
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
+I A + K TFE M D LI+G G
Sbjct: 839 ELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 90/218 (41%), Gaps = 14/218 (6%)
Query: 267 DQMERVLS--GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
+ M R +S ML + + ++ + +L + G + Y + + G+ P +
Sbjct: 159 EAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIY 218
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
N +I A K ++M+ + + + + TY ++I D F QM
Sbjct: 219 NAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAK 278
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVR---LASKLQIAENVSFYNAVISACIKADD 441
EG + +T T+ LING ++G ++ +R L L A + +I+ C D
Sbjct: 279 EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCT--GPIIALC----D 332
Query: 442 LMEME---RVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ E R++ MK K C P+ T++ + G+
Sbjct: 333 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGL 370
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 163/368 (44%), Gaps = 14/368 (3%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+ P T+ L+ K G + ARK+ MV +G+ P Y+AL+ C++ EA
Sbjct: 245 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 304
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L +MKT PD +TYS LI A + E E + + M TP+ V + ++
Sbjct: 305 EVLEEMKT-RGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHA 363
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG-ID 318
+ K+G + ++ L M + PDV T NT++ G++ + E+ + G +
Sbjct: 364 FCKSGKLLEAQKTLQEMRKQRK-SPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVL 422
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P+ T++ +I K M + +++ M K TY +I+ G + EY
Sbjct: 423 PDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYL 482
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA---ENVSFYNAVISA 435
+ M G + T+ LI+G A KV + R+ +++ A N+ YN +++
Sbjct: 483 LQGMKRAGCAPNVVTYTTLISGLCKA---RKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 539
Query: 436 CIKADDLMEMERVYKRMKE--KHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
+ + E +++ +RMK+ C PD+ T+ + A +D V EQ QM
Sbjct: 540 LCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMS---SDLVQEAEQLLEQMKST 596
Query: 494 ASGHWQQN 501
S +Q
Sbjct: 597 TSSQQEQG 604
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 158/356 (44%), Gaps = 6/356 (1%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K+ +A+++ E ++E+ P TY L+ L K A+ V +M+E G P
Sbjct: 193 KKLEEAMKLLEEMRERG-CPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMT 251
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+ +L+ +C+ +D+A L M +P+V TYS LI + +F + + ++M
Sbjct: 252 FNSLVDGFCKRGNVDDARKLLGIM-VAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEM 310
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
R VTP+ T + ++ G KA ++ E++L M S C PDV ++I+ F G+
Sbjct: 311 KTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSG-CTPDVVVYSSIIHAFCKSGK 369
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ--FPWTSSTY 359
+ ++ ++ R P+ T+N +I K + ++E M++ P TY
Sbjct: 370 LLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLP-DVVTY 428
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+ VI + ++M G D T+ +I+G G + ++ +
Sbjct: 429 STVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKR 488
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
A NV Y +IS KA + E ERV + M+ C P+ T++ M G
Sbjct: 489 AGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSG 544
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 164/356 (46%), Gaps = 19/356 (5%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL++ E +K F P T+ ++ + +G + A M G +P YTAL+
Sbjct: 131 ALELLEEMKSAGF-APDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALI 186
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
AA+ R ++EA L +M+ C P++ TY+ L+ A + + + M E
Sbjct: 187 AAFARAKKLEEAMKLLEEMRE-RGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGF 245
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PN +T N ++ G+ K G D ++L G++ + +P+V T + ++ + +
Sbjct: 246 APNVMTFNSLVDGFCKRGNVDDARKLL-GIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 304
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS---TYNNVI 363
E+ + G+ P+ T++ LI K DK+ + +R++ + Y+++I
Sbjct: 305 EVLEEMKTRGVTPDAFTYSALIHGLCKA---DKIEEAEQMLRRMAGSGCTPDVVVYSSII 361
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ-- 421
AF G + T ++M + D T+ +I+G G K+ + + ++Q
Sbjct: 362 HAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLG---KIAEAQVILEQMQES 418
Query: 422 --IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ +V Y+ VI+ K+D L+E +++ RM + C PD T++ + + K G
Sbjct: 419 GDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCG 474
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 119/269 (44%), Gaps = 6/269 (2%)
Query: 208 LPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFD 267
L +C+PDV +Y+ +I +A L ++M P+ T ++ AG D
Sbjct: 105 LASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLD 164
Query: 268 -QMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
M+ L S C P+V T +++ FA +++ + E+ R G P T+N+
Sbjct: 165 GAMDH-----LRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNV 219
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
L+ A K M V++ M + F T+N++++ F G+ M A+G
Sbjct: 220 LVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKG 279
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
M+ + T+ LI+G + F + + + + Y+A+I KAD + E E
Sbjct: 280 MRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAE 339
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++ +RM C PD +S + A+ K G
Sbjct: 340 QMLRRMAGSGCTPDVVVYSSIIHAFCKSG 368
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 147/371 (39%), Gaps = 33/371 (8%)
Query: 138 PFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDE 197
P + ++ LL +L + + A +F + EP Y +++ +C +
Sbjct: 71 PGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHA 130
Query: 198 AFVTLNQMKT---LPN----------------------------CQPDVYTYSTLIKACV 226
A L +MK+ P+ C P+V TY+ LI A
Sbjct: 131 ALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFA 190
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
A + E L ++M ER PN VT N+++ K M + V+ M+E P+V
Sbjct: 191 RAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGF-APNV 249
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
T N+++ F +G VD + G+ P T++ LI K + + + V+E
Sbjct: 250 MTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEE 309
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M+ + TY+ +I + E +M G D + +I+ + +G
Sbjct: 310 MKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGK 369
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK-HCRPDSETFS 465
+ +++ K + + +V YN VI K + E + + ++M+E PD T+S
Sbjct: 370 LLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYS 429
Query: 466 IMTEAYAKEGM 476
+ K M
Sbjct: 430 TVINGLCKSDM 440
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A + E ++E P TY ++ L KS A+K+ + M + G P YT +
Sbjct: 407 EAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTI 466
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ ++EA L MK C P+V TY+TLI A + + E + ++M
Sbjct: 467 IDGLCKCGRLEEAEYLLQGMKR-AGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAG 525
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES-ATCKPDVWTMNTILSVFANKGQVDM 304
PN VT N ++ G +G + ++++ M + A C PD T TI++ + V
Sbjct: 526 CPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQE 585
Query: 305 MERWYEKFRN 314
E+ E+ ++
Sbjct: 586 AEQLLEQMKS 595
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 71/166 (42%), Gaps = 3/166 (1%)
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
+P+ ++NI+I + ++E M+ F + T+ +I A ++ GD ++
Sbjct: 109 EPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGD---LDG 165
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
+ + + G + T+ LI +A A + + + + N+ YN ++ A
Sbjct: 166 AMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALC 225
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
K + + V K+M E P+ TF+ + + + K G D L
Sbjct: 226 KLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKL 271
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 163/346 (47%), Gaps = 2/346 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY ++ L K G +LA + N+M + +EP +YT ++ C+N +D+A
Sbjct: 218 QPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALN 277
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M+T +P+V TYS+LI + R+ L DM ER + P+ T + ++ +
Sbjct: 278 LFKEMET-KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 336
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + E++ M++ + P + T +++++ F ++D ++ +E + P+
Sbjct: 337 VKEGKLVEAEKLYDEMVKRSI-DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+++ LI + K + D+ + M + + TY +I+ GD + F+
Sbjct: 396 VVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFK 455
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M ++G+ + T+ L++G G K + + ++ + YN +I KA
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ + ++ + K +PD ++ M + ++G ++ AL +E
Sbjct: 516 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 561
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 148/342 (43%), Gaps = 39/342 (11%)
Query: 93 NLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLV 152
NL K++E K + V T + S +W A ++ + E+ P T+ L+
Sbjct: 277 NLFKEMETKG-IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI-NPDVFTFSALID 334
Query: 153 LLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQ 212
K G+ A K+++EMV+ I+P+ Y++L+ +C + +DEA M + +C
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS-KHCF 393
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
PDV +YSTLIK A R + L+++M +R + NTVT ++ G +AG D + +
Sbjct: 394 PDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEI 453
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDM---------------------------- 304
M+ P++ T NT+L G+++
Sbjct: 454 FKEMVSDGV-PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512
Query: 305 ----MERWYEKFRNF---GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+E ++ F N G+ P+ +N +I + +K ++ ++ + M++ S
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
YN +I A GD + ++M + G D T + N
Sbjct: 573 CYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 156/368 (42%), Gaps = 11/368 (2%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
A+ +F EM+K +PF P + KLL + K + ++ + +M G+ Y+
Sbjct: 64 DAVALFGEMVKSRPF--PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ +CR S + A L +M L +P++ T S+L+ + R L M
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKL-GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
PNTVT N ++ G + ++ M+ C+PD+ T +++ +G D+
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKG-CQPDLVTYGVVVNGLCKRGDTDL 239
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
K ++P + +I K + D ++ + M TY+++I
Sbjct: 240 AFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL---Q 421
+ G M + D TF LI+ + G K++ + +L ++
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG---KLVEAEKLYDEMVKRS 356
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
I ++ Y+++I+ D L E +++++ M KHC PD ++S + + + K D+
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGM 416
Query: 482 ALEQEKLQ 489
L +E Q
Sbjct: 417 ELFREMSQ 424
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 122/291 (41%), Gaps = 10/291 (3%)
Query: 191 RNSL----IDEAFVTLNQM-KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
RN L +D+A +M K+ P P + +S L+ A +F+++ +L + M
Sbjct: 54 RNGLSELKLDDAVALFGEMVKSRP--FPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG 111
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ N T +I++ + + VL M++ +P++ T++++L+ + + ++
Sbjct: 112 MPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGY-EPNIVTLSSLLNGYCHSKRISEA 170
Query: 306 ERWYEKFRNFGIDPETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
++ G P T TFN LI G + + + ++ + + K P TY V+
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQP-DLVTYGVVVN 229
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
GD +M ++ + +I+G ++ + I
Sbjct: 230 GLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRP 289
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
NV Y+++IS + R+ M E+ PD TFS + +A+ KEG
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 160/399 (40%), Gaps = 41/399 (10%)
Query: 126 QALQVFEMLKEQ--PFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
+AL++ M+ + P +Y +L K G + A ++EM++ GI P Y+
Sbjct: 181 EALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYS 240
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMD 242
+++AA C+ +D+A LN M PD TY++++ C E I TL + M
Sbjct: 241 SIIAALCKAQAMDKAMEVLNTMVK-NGVMPDCMTYNSILHGYCSSGQPKEAIGTL-KKMR 298
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
V PN VT + ++ K G + ++ M + +PD+ T T+L +A KG +
Sbjct: 299 SDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGL-EPDIATYRTLLQGYATKGAL 357
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
M + GI P+ FNILI AY K+ D+ V MR+ Y V
Sbjct: 358 VEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTV 417
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA-------------------- 402
I+ G FEQM EG+ + + LI+G
Sbjct: 418 IDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGI 477
Query: 403 --NAGLFHKVISS-------------VRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
N F+ +I S L ++ + ++ YN +I C A + E +
Sbjct: 478 CLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATK 537
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ M +PD T+ + Y + D AL +E
Sbjct: 538 LLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKE 576
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 155/350 (44%), Gaps = 9/350 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF-V 200
P TY L+ ++G+ +L +V++G +T LL C + +A +
Sbjct: 90 PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRF-ELIETLYQDMDER--SVTPNTVTQNIVL 257
L +M L C PDV++Y+ L+K D R E +E L+ D+R P+ V+ N VL
Sbjct: 150 VLRRMTEL-GCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVL 208
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD-MMERWYEKFRNFG 316
G+ K G D+ ML+ PDV T ++I++ +D ME +N G
Sbjct: 209 NGFFKEGDSDKAYSTYHEMLDRGIL-PDVVTYSSIIAALCKAQAMDKAMEVLNTMVKN-G 266
Query: 317 IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME 376
+ P+ T+N ++ Y + ++ MR TY++++ G +
Sbjct: 267 VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEAR 326
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
F+ M G++ D T+ L+ GYA G ++ + + L + I + +N +I A
Sbjct: 327 KIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAY 386
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALEQ 485
K + + + V+ +M++ P+ + + + K G ++D + EQ
Sbjct: 387 AKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQ 436
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 135/321 (42%), Gaps = 7/321 (2%)
Query: 160 PELARKVFNEMVEEG---IEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
P A +N M G + PT Y L+ CR +D F L + + D
Sbjct: 70 PAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVK-KGFRVDAI 128
Query: 217 TYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
T++ L+K C D + ++ + + M E P+ + N +L G + +L
Sbjct: 129 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHM 188
Query: 276 MLE--SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
M + PDV + NT+L+ F +G D Y + + GI P+ T++ +I A K
Sbjct: 189 MADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK 248
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+ DK V+ M K TYN+++ + G K T ++M ++G++ + T
Sbjct: 249 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVT 308
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+ L+N G + +K + +++ Y ++ L+EM + M
Sbjct: 309 YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMV 368
Query: 454 EKHCRPDSETFSIMTEAYAKE 474
+PD F+I+ AYAK+
Sbjct: 369 RNGIQPDHHVFNILICAYAKQ 389
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 136/329 (41%), Gaps = 2/329 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY +L SGQP+ A +M +G+EP Y++L+ C+N EA
Sbjct: 269 PDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKI 328
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ M T +PD+ TY TL++ + L M + P+ NI++ Y
Sbjct: 329 FDSM-TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYA 387
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K DQ V S M + P+V T++ V G VD ++E+ + G+ P
Sbjct: 388 KQEKVDQAMLVFSKMRQHGL-NPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNI 446
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+ LI +DK ++ M + +N++I++ G E F+
Sbjct: 447 IVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL 506
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G+K D T+ LI+G AG + + + + ++ Y +I+ +
Sbjct: 507 MVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSR 566
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEA 470
+ + ++K M P+ T++I+ +
Sbjct: 567 MDDALALFKEMVSSGVSPNIITYNIILQG 595
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 161/366 (43%), Gaps = 27/366 (7%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A ++F+ + ++ +P TY LL G + + MV GI+P ++ L
Sbjct: 324 EARKIFDSMTKRGL-EPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNIL 382
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ AY + +D+A + ++M+ P+V Y T+I + + ++ M +
Sbjct: 383 ICAYAKQEKVDQAMLVFSKMRQ-HGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG 441
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+TPN + ++ G +D+ E ++ ML+ C ++ N+I+ +G+V
Sbjct: 442 LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIF-FNSIIDSHCKEGRVIES 500
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E+ ++ G+ P+ T+N LI D+ + ++ M + TY +I
Sbjct: 501 EKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLING 560
Query: 366 F---SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK---------VISS 413
+ S M DA + F++M + G+ + T+ ++ G LFH +S
Sbjct: 561 YCRVSRMDDALAL---FKEMVSSGVSPNIITYNIILQG-----LFHTRRTAAAKELYVSI 612
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ ++L++ S YN ++ K + E R+++ + + ++ TF+IM A K
Sbjct: 613 TKSGTQLEL----STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 668
Query: 474 EGMNDK 479
G D+
Sbjct: 669 CGRMDE 674
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/441 (19%), Positives = 182/441 (41%), Gaps = 12/441 (2%)
Query: 53 TSFSSESAVAAKKRLWKEGEYPGV-SETSIPGYRSKRTPIKNLKKKLERKAK--AKAWVN 109
+S + A+ K++ +G P V + +S+ Y K +K + K + +
Sbjct: 283 SSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 342
Query: 110 TVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNE 169
T + K + + +++ QP + L+ K + + A VF++
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGI-QPDHHVFNILICAYAKQEKVDQAMLVFSK 401
Query: 170 MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM 229
M + G+ P Y ++ C++ +D+A + QM P++ Y++LI
Sbjct: 402 MRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMID-EGLTPNIIVYTSLIHGLCTCD 460
Query: 230 RFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM 289
+++ E L +M +R + NT+ N ++ + K G + E++ M+ KPD+ T
Sbjct: 461 KWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV-KPDIITY 519
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK-KRMYDKMSSVMEYMR 348
NT++ G++D + + G+ P+ T+ LI Y + RM D ++ E +
Sbjct: 520 NTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVS 579
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
P TYN +++ + + + G + + T+ +++G L
Sbjct: 580 SGVSP-NIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTD 638
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ + + + +N +I A +K + E + ++ PD T+S+M
Sbjct: 639 EALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMA 698
Query: 469 EAYAKEG----MNDKVYALEQ 485
E ++G ++D ++E+
Sbjct: 699 ENLIEQGSLEELDDLFLSMEE 719
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 157/421 (37%), Gaps = 83/421 (19%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QA+ VF +++ P Y ++ +L KSG + A F +M++EG+ P +YT+L
Sbjct: 394 QAMLVFSKMRQHGL-NPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 452
Query: 186 LAAYCR--------------------------NSLID----EAFVT----LNQMKTLPNC 211
+ C NS+ID E V L +
Sbjct: 453 IHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV 512
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
+PD+ TY+TLI C A + + L M V P+ VT ++ GY + D
Sbjct: 513 KPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALA 572
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+ M+ S P++ T N IL + + + Y G E T+NI++
Sbjct: 573 LFKEMVSSGV-SPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGL 631
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
K + D+ + + + + T+N +I A G + F A G+ D
Sbjct: 632 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDV 691
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
+T+ + AEN+ I+ L E++ ++
Sbjct: 692 RTYSLM-------------------------AENL----------IEQGSLEELDDLFLS 716
Query: 452 MKEKHCRPDSETFSIMTEAYAKEG-----------MNDKVYALEQEKLQMLLEASG-HWQ 499
M+E C DS + + + G +++K ++LE LLE+S W+
Sbjct: 717 MEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLESSPIVWE 776
Query: 500 Q 500
Q
Sbjct: 777 Q 777
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 156/339 (46%), Gaps = 9/339 (2%)
Query: 125 FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+ AL +F+ + E Y+P Y ++ L KS Q + A + N M +GI P Y +
Sbjct: 168 YDALYMFDRMVEMG-YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNS 226
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L++ C + D+A ++ M T PDV+T++ LI ACV R E LY++M R
Sbjct: 227 LISGLCNSGRWDDATRMVSCM-TKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRR 285
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
S+ P+ VT ++++ G D+ E++ G + S C PDV T + +++ + +V+
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEQMF-GFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ + + G+ T T+ +LI Y + + + ++M P TYN ++
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLH 404
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ--- 421
D G + M GM AD T+ +I G AG +V + L L
Sbjct: 405 GLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAG---EVADAWDLYCSLNLKG 461
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
+ ++ Y A++ K E + ++++MKE P+
Sbjct: 462 LTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 145/356 (40%), Gaps = 10/356 (2%)
Query: 131 FEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYC 190
F M++ +P P + +LL + K + ++ ++ +M GI LL +C
Sbjct: 70 FHMVQCRPL--PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC 127
Query: 191 RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT 250
R S + A L +M L + +PD+ T+ +L+ R ++ M E PN
Sbjct: 128 RCSQLSLALSFLGKMMKLGH-EPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNV 186
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYE 310
V N ++ G K+ D +L+ M E +PD T N+++S N G+ D R
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRM-EVDGIRPDAVTYNSLISGLCNSGRWDDATRMVS 245
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
I P+ TFN LI A K+ + + E M + TY+ +I
Sbjct: 246 CMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYS 305
Query: 371 DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL---ASKLQIAENVS 427
E F M ++G D T+ LINGY + KV ++L S+ + N
Sbjct: 306 RLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKS---KKVEHGMKLFCEMSQRGVVRNTV 362
Query: 428 FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
Y +I +A L E ++K M P+ T++++ G +K +
Sbjct: 363 TYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVI 418
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 93/213 (43%), Gaps = 6/213 (2%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P + + +LS + + D++ +E+ + GI T NIL+ + + S
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ M KL T+ +++ F Y F++M G + + + +I+G
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198
Query: 404 AGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
+ +V +++ L ++++ I + YN++IS + + R+ M ++ PD
Sbjct: 199 S---KQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPD 255
Query: 461 SETFSIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
TF+ + +A KEG + L +E ++ L+
Sbjct: 256 VFTFNALIDACVKEGRISEAEELYEEMIRRSLD 288
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 181/387 (46%), Gaps = 11/387 (2%)
Query: 108 VNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
V+T F ++ QA E ++E F +Y L+ L +SG + A +V+
Sbjct: 159 VDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAY-SYNGLIHFLLQSGFCKEALEVY 217
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
MV EG++P+ + ++AL+ A + I L +M+++ +P++YTY+ I+
Sbjct: 218 RRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESM-GLRPNIYTYTICIRVLGR 276
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
+ + + + MD+ P+ VT +++ A D + + M +S++ KPD
Sbjct: 277 DGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKM-KSSSHKPDKV 335
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T T+L F++ G +D +E+ + + G P+ TF IL+ A K ++ +++ M
Sbjct: 336 TYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTM 395
Query: 348 RKLQFPWTSSTYNNVIEAF---SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
RK TYN +I + + DA + F M + G++ T+ LI+ + +
Sbjct: 396 RKQGVLPNLHTYNTLISGLLRANRLDDALDL---FSNMESLGVEPTAYTYILLIDYHGKS 452
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
G K + + IA N+ NA + + + L E + ++ +K PDS T+
Sbjct: 453 GHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTY 512
Query: 465 SIMTEAYAKEGMNDKVYAL--EQEKLQ 489
++M + Y+K G D+ L E K+Q
Sbjct: 513 NMMMKCYSKVGQVDEAIKLLSEMSKVQ 539
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 157/349 (44%), Gaps = 3/349 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
A+ +F +K ++P + TY+ LL G + K++ EM +G P +T L
Sbjct: 317 DAMCLFTKMKSSS-HKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTIL 375
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A C+ I+EAF L+ M+ P+++TY+TLI + A R + L+ +M+
Sbjct: 376 VNALCKAGRINEAFDLLDTMRK-QGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLG 434
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
V P T +++ +GK+G + M ++ P++ N L A G++
Sbjct: 435 VEPTAYTYILLIDYHGKSGHPGKALETFEKM-KARGIAPNIVACNASLYSLAEMGRLGEA 493
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ + + ++ G+ P++ T+N+++ Y K D+ ++ M K+Q N++I+
Sbjct: 494 KAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDT 553
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
G + F +M + T+ L+ G G K + + + N
Sbjct: 554 LYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPN 613
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
+N ++ K D++ +++ +M +CRPD TF+ + + K+
Sbjct: 614 TITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQ 662
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 150/358 (41%), Gaps = 38/358 (10%)
Query: 144 EGTYMKLLVLLGKSGQPELARKVFNEMVEE-GIEPTPELYTALLAAYCRNSLIDEAFVTL 202
+ + ++ +L K + +AR VF + +E G++PT ++Y L+ + ++ A+
Sbjct: 754 DSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLF 813
Query: 203 NQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGK 262
+MK+ C PD +TY++LI A + + + LY +M R PNT+T N+V+ K
Sbjct: 814 EEMKS-AGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVK 872
Query: 263 AGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETR 322
+ D+ + ++ S P T ++ G++D ++ ++G P +
Sbjct: 873 SNRLDKAMDLYYNLV-SGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSA 931
Query: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
+NIL+ YGK D + M K +Y +++ G + FE++
Sbjct: 932 IYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKL 991
Query: 383 HAEGMKADTKTFCCLINGYANA-------GLFHK---------------------VISSV 414
G+ D + +ING + LFH+ ++ +
Sbjct: 992 KQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMI 1051
Query: 415 RLASKL-------QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
A K+ + NV YNA+I + + +YK+M C P++ TF+
Sbjct: 1052 EEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFA 1109
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 143/319 (44%), Gaps = 9/319 (2%)
Query: 88 RTPIKNLKKKLERKAKAKAWVNTVAETFSD-HVLKKQWFQALQVFEMLKEQPFYQPKEGT 146
R K+L K K + N + + F + H ++ W +FE +K P T
Sbjct: 774 RNVFVKFTKELGVKPTLKVY-NLLIDGFLEVHNVEVAW----NLFEEMKSAG-CAPDTFT 827
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y L+ GKSG+ +++EM+ G +P Y +++ +++ +D+A +
Sbjct: 828 YNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLV 887
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
+ + P T+ LI + + R + ++ M PN+ NI++ GYGK G
Sbjct: 888 S-GDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHV 946
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
D M++ +PD+ + ++ + G+VD ++EK + G+DP+ +N+
Sbjct: 947 DTACEFFKRMVKEGI-RPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNL 1005
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
+I G+ + ++ S+ M+ TYN++I +G + +E++ G
Sbjct: 1006 MINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIG 1065
Query: 387 MKADTKTFCCLINGYANAG 405
+K + T+ LI GY +G
Sbjct: 1066 LKPNVFTYNALIRGYTLSG 1084
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 166/404 (41%), Gaps = 49/404 (12%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL+ FE +K + P L L + G+ A+ +FNE+ G+ P Y +
Sbjct: 457 KALETFEKMKARGI-APNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMM 515
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ Y + +DEA L++M + C+PDV ++LI A R E ++ M+E +
Sbjct: 516 MKCYSKVGQVDEAIKLLSEMSKV-QCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMN 574
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGM----------------------------- 276
+ P VT NI+L G GK G + ++ M
Sbjct: 575 LAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLAL 634
Query: 277 -----LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI-GA 330
+ + C+PDV T NTI+ F + Q+ + + + + P+ T L+ G
Sbjct: 635 KMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL-LRPDHVTLCTLLPGV 693
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA-FSDMGDAKHMEYTFEQMHAEGMKA 389
++ D ++ ++ S + +V+ ++ G K + + E++ +
Sbjct: 694 IKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFG-ERLVCRAICK 752
Query: 390 DTKTFCCLINGYANAGLFHKVISS-----VRLASKLQIAENVSFYNAVISACIKADDLME 444
D +I HK S V+ +L + + YN +I ++ ++
Sbjct: 753 DDSVLIPIIKVLCK----HKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEV 808
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
+++ MK C PD+ T++ + +A+ K G ++++ L E L
Sbjct: 809 AWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEML 852
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 156/376 (41%), Gaps = 8/376 (2%)
Query: 100 RKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQ 159
RK + V V + SD + AL F+ + E P T +L +L +
Sbjct: 86 RKGSSSDEVLGVLHSISDPI------HALFYFKSVGELPNVVHTTETCNHMLEILRVHRR 139
Query: 160 PELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYS 219
E VF+ M + I + Y + + + +A L +M+ + Y+Y+
Sbjct: 140 VEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMRE-AGFVLNAYSYN 198
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
LI + + + +Y+ M + P+ T + ++ GK + +L M ES
Sbjct: 199 GLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEM-ES 257
Query: 280 ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
+P+++T + V G++D R ++ + G P+ T+ +LI A R D
Sbjct: 258 MGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDD 317
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+ M+ TY +++ FSD G +E + +M A+G D TF L+N
Sbjct: 318 AMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVN 377
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
AG ++ + K + N+ YN +IS ++A+ L + ++ M+ P
Sbjct: 378 ALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEP 437
Query: 460 DSETFSIMTEAYAKEG 475
+ T+ ++ + + K G
Sbjct: 438 TAYTYILLIDYHGKSG 453
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 139/332 (41%), Gaps = 51/332 (15%)
Query: 110 TVAETFSD--HV--LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARK 165
T+ + FSD H+ ++K W + E Y P T+ L+ L K+G+ A
Sbjct: 339 TLLDKFSDCGHLDKVEKIWTEM--------EADGYAPDVVTFTILVNALCKAGRINEAFD 390
Query: 166 VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIK-- 223
+ + M ++G+ P Y L++ R + +D+A + M++L +P YTY LI
Sbjct: 391 LLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESL-GVEPTAYTYILLIDYH 449
Query: 224 --------------------------ACVDAMRFELIE--------TLYQDMDERSVTPN 249
AC +A + L E ++ ++ + P+
Sbjct: 450 GKSGHPGKALETFEKMKARGIAPNIVAC-NASLYSLAEMGRLGEAKAMFNELKSSGLAPD 508
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
+VT N+++ Y K G D+ ++LS M C+PDV +N+++ G+V+ + +
Sbjct: 509 SVTYNMMMKCYSKVGQVDEAIKLLSEM-SKVQCEPDVIVINSLIDTLYKAGRVEEAWQMF 567
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
+ + P T+NIL+ GK+ K + E M + T+N +++
Sbjct: 568 CRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKN 627
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+ F +M + D TF +I+G+
Sbjct: 628 DEVDLALKMFYKMTTMNCRPDVLTFNTIIHGF 659
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 115/275 (41%), Gaps = 1/275 (0%)
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
+P + Y+ LI ++ E+ L+++M P+T T N ++ +GK+G +++
Sbjct: 787 KPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFD 846
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+ ML CKP+ T N ++S ++D Y + P TF LI
Sbjct: 847 LYDEMLTRG-CKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGL 905
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
K D + + M S+ YN ++ + +G F++M EG++ D
Sbjct: 906 LKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDL 965
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
K++ L++ AG + + + ++ YN +I+ ++ E ++
Sbjct: 966 KSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHE 1025
Query: 452 MKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
M+ + PD T++ + GM ++ + +E
Sbjct: 1026 MQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEE 1060
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/386 (18%), Positives = 147/386 (38%), Gaps = 21/386 (5%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
NT+ F + + Q A+ +F +K+ +P T LL + KSGQ E A ++
Sbjct: 653 NTIIHGF---IKQNQIKNAIWLFHQMKK--LLRPDHVTLCTLLPGVIKSGQIEDAFRITE 707
Query: 169 EMV-EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
+ + G + ++ + ++A + ++ C+ D + C
Sbjct: 708 DFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKH 767
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKA-------GMFDQMERVLSGMLESA 280
+ E V P N+++ G+ + +F++M+ SA
Sbjct: 768 KKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMK--------SA 819
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
C PD +T N+++ G+++ + Y++ G P T T+N++I K DK
Sbjct: 820 GCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKA 879
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+ + F T T+ +I+ G F+ M G + ++ + L+NG
Sbjct: 880 MDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNG 939
Query: 401 YANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
Y G + K I ++ Y ++ A + + ++++K+ PD
Sbjct: 940 YGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPD 999
Query: 461 SETFSIMTEAYAKEGMNDKVYALEQE 486
+++M + ++ +L E
Sbjct: 1000 LVAYNLMINGLGRSQRTEEALSLFHE 1025
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 155/345 (44%), Gaps = 22/345 (6%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L SG ++A +F+ M +G+ P Y AL+ N I AFV
Sbjct: 352 EPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFV 411
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKA-CV--DAMRFELIETLYQDMDERSVTPNTVTQNIVL 257
LN M C P++ TY+ +IK C+ D + L+ +M +R + N VT N ++
Sbjct: 412 VLNLMGR-NGCSPNIVTYNEMIKGYCILGDPKKAMLV---MNNMLQRGHSANLVTYNTII 467
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
GY +G R+L ++ CKPD W+ ++ F +++ + + + G+
Sbjct: 468 KGYCDSGNTTSALRILD-LMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 526
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P T+ LI Y K D +S++E+M++ TYN +I + + E
Sbjct: 527 CPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE 586
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISSVRLASKLQIAENVSFYN 430
+ M EG+ + T+ +I+G G +F+K+I L N+ Y+
Sbjct: 587 LCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCL-------PNLLTYS 639
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++I A + + E E ++ ++ PD T+ M EAY G
Sbjct: 640 SLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSG 684
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 145/369 (39%), Gaps = 37/369 (10%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP Y ++ L K G A + ++ E + P YT+++ +CR +D A
Sbjct: 212 QPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQ 271
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
NQM C+P+ TYSTLI D+ R L ++M + P T +
Sbjct: 272 VFNQMAK-EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
G ++ R+ M ++ C+P+V+T ++S G + + + + G+ P
Sbjct: 331 CDMGCYEDAWRLFVDM-KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 389
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T T+N LI + R V+ M + TYN +I+ + +GD K
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN 449
Query: 381 QMHAEGMKADTKTFCCLINGYANAG----------------------LFHKVISSVRLAS 418
M G A+ T+ +I GY ++G + ++I S
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509
Query: 419 KLQ-------------IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
K++ + N Y A+I K + L + + MK CRP+ +T++
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 569
Query: 466 IMTEAYAKE 474
++ K+
Sbjct: 570 VLIHGLTKQ 578
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 101/253 (39%), Gaps = 3/253 (1%)
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
Y M V PN + N V+ K G E ++ + ES PD +T +++
Sbjct: 203 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEM-SPDTFTYTSMILGHC 261
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
K +D + + + G +P T T++ LI G R+ + + E + P T+
Sbjct: 262 RKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILP-TA 320
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
T I A DMG + F M +G + + T+ LI+G +GL I
Sbjct: 321 HTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHR 380
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
S+ + N YNA+I+ ++ + V M C P+ T++ M + Y G
Sbjct: 381 MSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGD 440
Query: 477 NDKVYALEQEKLQ 489
K + LQ
Sbjct: 441 PKKAMLVMNNMLQ 453
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 109/285 (38%), Gaps = 26/285 (9%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL++F + EQ P TY L+ LG+ G+ E A +F E+ G+ P Y ++
Sbjct: 619 ALEMFNKMIEQGCL-PNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMI 677
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
AY + ++ AF L +M CQP ++TY LIK ++ Y D+R
Sbjct: 678 EAYIMSGKVEHAFNFLGRMIK-AGCQPTLWTYGVLIKG---------LKNEYLLADQRLA 727
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
V N +G V+S L V N ++S + G
Sbjct: 728 ALPDVVPNC---SFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAG------ 778
Query: 307 RWYE------KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
RW+E + G+ P+ +N L+ + + R D V ++M + Y
Sbjct: 779 RWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYK 838
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
+I A + K TFE M D LI+G G
Sbjct: 839 ELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 90/218 (41%), Gaps = 14/218 (6%)
Query: 267 DQMERVLS--GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
+ M R +S ML + + ++ + +L + G + Y + + G+ P +
Sbjct: 159 EAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIY 218
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
N +I A K ++M+ + + + + TY ++I D F QM
Sbjct: 219 NAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAK 278
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVR---LASKLQIAENVSFYNAVISACIKADD 441
EG + +T T+ LING ++G ++ +R L L A + +I+ C D
Sbjct: 279 EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCT--GPIIALC----D 332
Query: 442 LMEME---RVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ E R++ MK K C P+ T++ + G+
Sbjct: 333 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGL 370
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 148/334 (44%), Gaps = 2/334 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ G A K+ EM+ G+ P Y A++ C+ +++ A
Sbjct: 215 PTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAEL 274
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ + T C+PDV +Y+ L++A ++ +++ E L +M R PN VT +I++
Sbjct: 275 ITSL-TSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLC 333
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G D+ VL M+E PD ++ + ++S +G++D+ + + G P+
Sbjct: 334 RFGRIDEAISVLKVMIEKEL-TPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDI 392
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+N ++ A K ++ + +R + P S+YN +I A GD
Sbjct: 393 VNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPA 452
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M ++G+ D T+ LI+ GL + I + + V YN V+ K
Sbjct: 453 MISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRR 512
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + ++ M EK CRP+ T+ ++ E G
Sbjct: 513 IDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAG 546
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 163/367 (44%), Gaps = 14/367 (3%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K +A +V E+L+ +P Y ++ K Q E A +V N M G P
Sbjct: 127 KNIEKASRVMEILESHT--EPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVT 184
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y ++ + C + A L+Q+ L NC P V TY+ LI+A + L ++M
Sbjct: 185 YNIMIGSLCNRRKLGLALTVLDQL-LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEM 243
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
R + P+ T N ++ G K GM ++ +++ L S C+PDV + N +L F N+G+
Sbjct: 244 LARGLLPDMYTYNAIIRGMCKEGMVERAAELITS-LTSKGCEPDVISYNILLRAFLNQGK 302
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
D E+ + + G +P T++ILI + + D+ SV++ M + + + +Y+
Sbjct: 303 WDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDP 362
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI-----NGYANAGLFHKVISSVRL 416
+I A G + M + G D + ++ NG AN L ++ + +R
Sbjct: 363 LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQAL--EIFNKLR- 419
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ NVS YN +ISA D + M K PD T++ + ++G+
Sbjct: 420 --GMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGL 477
Query: 477 NDKVYAL 483
++ L
Sbjct: 478 VEEAIGL 484
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 2/139 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QAL++F L+ P +Y ++ L G A + M+ +GI+P Y +L
Sbjct: 410 QALEIFNKLRGMGC-PPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSL 468
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
++ CR+ L++EA L+ M+ +P V +Y+ ++ R + ++ +M E+
Sbjct: 469 ISCLCRDGLVEEAIGLLDDMEQ-SGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKG 527
Query: 246 VTPNTVTQNIVLGGYGKAG 264
PN T +++ G G AG
Sbjct: 528 CRPNETTYILLIEGIGFAG 546
>gi|414888269|tpg|DAA64283.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 616
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 186/439 (42%), Gaps = 52/439 (11%)
Query: 90 PIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMK 149
P ++ + LE A+ + + A + + + W ++L++F+ ++ Q + +P E +
Sbjct: 86 PRGSIARCLE-TARHRLTLQDFAAVYREFSRRGDWQRSLRLFKYMQRQSWCRPDEHIHAI 144
Query: 150 LLVLLGKSGQPELARK---VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
++ +LG+ G P L K VF+++ E T YT+L+AAY RN+L +EA L+QMK
Sbjct: 145 VIGVLGRQG-PALLDKCLEVFHDLPAE--SRTALSYTSLIAAYARNALHEEARALLDQMK 201
Query: 207 TLPNCQPDVYTYSTLIKACVDA----MRFELIETLYQDMDER---SVTPNTVTQNIVLGG 259
P TY+T++ AC A + F+++ L+ +M SV P+ T N +L
Sbjct: 202 A-TGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDASPSVRPDLTTYNTLLAA 260
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY---------- 309
+ DQ E +L MLE A PD + I+ FA+ G + +
Sbjct: 261 AAVRSLADQSEMLLHTMLE-AGVSPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTA 319
Query: 310 -------------------------EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
+ + G P T+ +L+ YG++ +D + +
Sbjct: 320 DASAYLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLF 379
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
MR P ++TYN + F D G K + F M G++ D T ++ +
Sbjct: 380 REMRT-AVPPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPDMVTCENVMAACGHG 438
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
GL + ++ + Y ++ A A E + M E P ET+
Sbjct: 439 GLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETY 498
Query: 465 SIMTEAYAKEGMNDKVYAL 483
+ + AYA+ G+ + A+
Sbjct: 499 NALAFAYARGGLFQEAEAI 517
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 110/292 (37%), Gaps = 39/292 (13%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y+ L+ + G A V +M +G PT Y LL Y R D +M+
Sbjct: 324 YLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMR 383
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
T PD TY+ L + D F+ + L+ DM + V P+ VT V+ G G+
Sbjct: 384 T--AVPPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPDMVTCENVMAACGHGGLH 441
Query: 267 DQMERVLS-----GMLESATCK-----------------------------PDVWTMNTI 292
VL GM+ +A P + T N +
Sbjct: 442 GDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNAL 501
Query: 293 LSVFANKGQVDMMERWYEKF-RNFGIDPETRTFNILIGAYGK-KRMYDKMSSVMEYMRKL 350
+A G E + + N GI +F+ LI AY + R+ D + + ME MRK
Sbjct: 502 AFAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYME-MRKS 560
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+F + V+ A+ G + FE++ + +C +++ YA
Sbjct: 561 RFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTMPSVIAYCMMLSLYA 612
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 66/156 (42%), Gaps = 1/156 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P Y L+ LG + E A FN M E G PT E Y AL AY R L EA
Sbjct: 458 PTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAI 517
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
++M Q ++ LI+A R + Y +M + P+ + VL Y
Sbjct: 518 FSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKSRFNPDERSLEGVLNAYC 577
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
AG+ D+ + L+S+ P V +LS++A
Sbjct: 578 IAGVIDESKEQFE-ELQSSVTMPSVIAYCMMLSLYA 612
>gi|356540087|ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 667
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 166/356 (46%), Gaps = 8/356 (2%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
W +AL + + + ++ Y+P Y LL + ++ Q LA +F+EM ++G+ P Y+
Sbjct: 124 WQRALALLDWINDKALYRPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYS 183
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
L+ + ++ L D + L QM+ N D+ YS LI + +++ +
Sbjct: 184 TLITCFGKHGLFDSSLFWLQQMEQ-DNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKA 242
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
++TP+ + N ++ +GKA +F + +L M ++A +PD + +T+L+++ + +
Sbjct: 243 STITPDLIAYNSMINVFGKAKLFREARLLLQEMRDNAV-QPDTVSYSTLLAIYVDNQKFV 301
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ + + T NI+I YG+ M + + MRK+ +YN ++
Sbjct: 302 EALSLFSEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLL 361
Query: 364 EAFSD---MGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+ + G+A H+ F M ++ ++ + T+ +IN Y K + ++ +K
Sbjct: 362 RVYGEADLFGEAIHL---FRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKR 418
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
I N Y+ +IS KA L ++++++ R D + M AY + G+
Sbjct: 419 GIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERTGL 474
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 183/434 (42%), Gaps = 75/434 (17%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQ---------------------- 159
KQW A +F+ ++++ P TY L+ GK G
Sbjct: 158 KQWHLAHGLFDEMRQKGL-SPDRYTYSTLITCFGKHGLFDSSLFWLQQMEQDNVSGDLVL 216
Query: 160 ----PELARK---------VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
+LARK +F+ + I P Y +++ + + L EA + L +M+
Sbjct: 217 YSNLIDLARKLSDYSKAISIFSRLKASTITPDLIAYNSMINVFGKAKLFREARLLLQEMR 276
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
QPD +YSTL+ VD +F +L+ +M+E + T NI++ YG+ M
Sbjct: 277 D-NAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEMNEAKCPLDLTTCNIMIDVYGQLHMP 335
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR---NFGIDPETRT 323
+ +R+ M +P+V + NT+L V+ G+ D+ FR + + T
Sbjct: 336 KEADRLFWSM-RKMGIQPNVISYNTLLRVY---GEADLFGEAIHLFRLMQSKDVQQNVVT 391
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
+N +I YGK ++K +++++ M K + TY+ +I + G F+++
Sbjct: 392 YNTMINIYGKTLEHEKATNLIQEMNKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLR 451
Query: 384 AEGMKADTKTFCCLINGYANAGL-------FHKV-----------ISSVRLASKLQIA-- 423
+ G++ D + +I Y GL H++ I+ + A +++ A
Sbjct: 452 SSGVRIDEVLYQTMIVAYERTGLVAHAKRLLHELKRPDNIPRDTAIAILARAGRIEEATW 511
Query: 424 -----------ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
+++S + +I+ K + V+++M+E PDS+ +++ A+
Sbjct: 512 VFRQAFDAREVKDISVFGCMINLFSKNKKYANVVEVFEKMREVGYFPDSDVIALVLNAFG 571
Query: 473 KEGMNDKVYALEQE 486
K DK AL ++
Sbjct: 572 KLREFDKADALYRQ 585
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 160/375 (42%), Gaps = 40/375 (10%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLV-LLGKSGQPELARKVFNEMVEEGIE 176
+V +++ +AL +F + E P + T +++ + G+ P+ A ++F M + GI+
Sbjct: 294 YVDNQKFVEALSLFSEMNEAKC--PLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQ 351
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
P Y LL Y L EA M++ + Q +V TY+T+I + E
Sbjct: 352 PNVISYNTLLRVYGEADLFGEAIHLFRLMQS-KDVQQNVVTYNTMINIYGKTLEHEKATN 410
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ--------------MERVL--------- 273
L Q+M++R + PN +T + ++ + KAG D+ ++ VL
Sbjct: 411 LIQEMNKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYE 470
Query: 274 -SGMLESA------TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
+G++ A +PD +T +++ A G+++ + + + + F
Sbjct: 471 RTGLVAHAKRLLHELKRPDNIPRDTAIAILARAGRIEEATWVFRQAFDAREVKDISVFGC 530
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
+I + K + Y + V E MR++ + S V+ AF + + + + QMH EG
Sbjct: 531 MINLFSKNKKYANVVEVFEKMREVGYFPDSDVIALVLNAFGKLREFDKADALYRQMHEEG 590
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVS---FYNAVISACIKADDLM 443
+ +++ Y F V S L KL N++ + V S +AD L
Sbjct: 591 CVFPDEVHFQMLSLYGARKDFVMVES---LFEKLDSNPNINKKELHLVVASIYERADRLN 647
Query: 444 EMERVYKRMKEKHCR 458
+ R+ RM +K R
Sbjct: 648 DASRIMNRMNKKANR 662
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 157/354 (44%), Gaps = 5/354 (1%)
Query: 133 MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRN 192
ML + P +P TY ++ K A++V +M E G EP ++T+LL+ Y
Sbjct: 494 MLTKGP--EPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSK 551
Query: 193 SLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVT 252
+EA+ L +M T C PDV Y++LI R ++ M E+ P+ +T
Sbjct: 552 GRAEEAYQVLTEM-TARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALT 610
Query: 253 QNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF 312
++ + K G + +L M +S PD + N+++ + +VD Y++
Sbjct: 611 YGTIIQNFSKIGNVEAAGEILELMAKSGV-GPDCFAYNSLMDGYVKLERVDQAFGVYDRM 669
Query: 313 RNFGIDPETRTFNILIGAYGKKRMYDKMSSVM-EYMRKLQFPWTSSTYNNVIEAFSDMGD 371
GI P TFN+L+ K D+ S+ E + K + P T +Y +I+ G
Sbjct: 670 VASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGR 729
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNA 431
F++M G+ + T+ LI A AG + V KL + +V Y+A
Sbjct: 730 VSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSA 789
Query: 432 VISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
+I+ I + + V++ M ++ C P+ T+ ++ + G + A++Q
Sbjct: 790 LITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQ 843
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 165/399 (41%), Gaps = 44/399 (11%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
AL++F++L +P TY ++ L + + E A+ F+E ++ YT +
Sbjct: 317 DALELFKLLSSYGC-KPNAATYTTIIQGLYDAQRMEEAKAFFDEALD------VISYTTV 369
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + IDEA ++KT C P+V Y+ +I + A R E ++DM S
Sbjct: 370 IKGLADSKRIDEACELFEKLKT-AGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSS 428
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P T +V+ G KA M +V M++ C PD T T++ F+ ++D
Sbjct: 429 CVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKG-CVPDTITYTTLIDGFSKASKMDEA 487
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ-----FPWTS---- 356
+ + G +P T+ ++ + K M ++ V+ MR+ F +TS
Sbjct: 488 RKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSY 547
Query: 357 --------------------------STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
Y ++I+ G + F+ M +G D
Sbjct: 548 YLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPD 607
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
T+ +I ++ G + L +K + + YN+++ +K + + + VY
Sbjct: 608 ALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYD 667
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
RM +P++ TF+++ K+G D+ ++L +E L+
Sbjct: 668 RMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLE 706
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 141/339 (41%), Gaps = 45/339 (13%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
T+M L+ L G+ + A +++ EM+E G EP E+ +L+ A C+ +DEA
Sbjct: 196 TFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEA------- 248
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+YQ + + V + V N ++ GY K G
Sbjct: 249 -----------------------------NEIYQTVVAKKVATSRVAYNSLMDGYCKLGR 279
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D ++L M+E PD+ T N +++ F+ ++D ++ ++G P T+
Sbjct: 280 VDDGLKLLLQMVECDN-FPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYT 338
Query: 326 ILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
+I G Y +RM + + E + + +Y VI+ +D FE++
Sbjct: 339 TIIQGLYDAQRMEEAKAFFDEALDVI-------SYTTVIKGLADSKRIDEACELFEKLKT 391
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
G + + +I+G AG + + S + Y VI KA L +
Sbjct: 392 AGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPD 451
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+V+++M +K C PD+ T++ + + ++K D+ L
Sbjct: 452 ACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKL 490
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 158/378 (41%), Gaps = 14/378 (3%)
Query: 110 TVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNE 169
T+ E S+H + +A +++ + E+ Y+P L+ L K+G+ + A +++
Sbjct: 199 TLIEALSNH---GKLDEACELYREMIERG-YEPYLEVQDSLIFALCKAGKVDEANEIYQT 254
Query: 170 MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM 229
+V + + + Y +L+ YC+ +D+ L QM N PD+ TY+ L+ A
Sbjct: 255 VVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDN-FPDIQTYNILVAGFSRAN 313
Query: 230 RFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM 289
R + L++ + PN T ++ G A ++ + L DV +
Sbjct: 314 RLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL-------DVISY 366
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI-GAYGKKRMYDKMSSVMEYMR 348
T++ A+ ++D +EK + G P + +I G R+ D + + E M
Sbjct: 367 TTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKN-FEDMS 425
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
T +TY VI+ FEQM +G DT T+ LI+G++ A
Sbjct: 426 GSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMD 485
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ + + Y +++ K D + E + V +M+E+ C P F+ +
Sbjct: 486 EARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLL 545
Query: 469 EAYAKEGMNDKVYALEQE 486
Y +G ++ Y + E
Sbjct: 546 SYYLSKGRAEEAYQVLTE 563
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 139/320 (43%), Gaps = 9/320 (2%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L K+ + + A ++F EM G EPT Y +++ +DEA+ N M C+P
Sbjct: 30 LCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMID-NGCEP 88
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
DV ++TLI A + ++ L +R P+ V+ GY KAG D ++L
Sbjct: 89 DVIAFTTLIHGFCKAGQPQVGHMLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGFKIL 147
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
ML +A C PD ++ G+VD +E+ R G + TF LI A
Sbjct: 148 EEML-AAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSN 206
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
D+ + M + + +++I A G ++ + A+ +
Sbjct: 207 HGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVA 266
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAEN---VSFYNAVISACIKADDLMEMERVYK 450
+ L++GY G +V ++L ++ +N + YN +++ +A+ L + ++K
Sbjct: 267 YNSLMDGYCKLG---RVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFK 323
Query: 451 RMKEKHCRPDSETFSIMTEA 470
+ C+P++ T++ + +
Sbjct: 324 LLSSYGCKPNAATYTTIIQG 343
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 128/318 (40%), Gaps = 5/318 (1%)
Query: 129 QVFEMLKEQPFY--QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+ E+ E P +P +Y ++ L + + A K FN M++ G EP +T L+
Sbjct: 38 KAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLI 97
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+C+ + LNQ L +PDV+ Y+++I A + + ++M
Sbjct: 98 HGFCKAGQPQVGHMLLNQ--ALKRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGC 155
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P+ +++ K G D+ + M +S C D T T++ +N G++D
Sbjct: 156 IPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSG-CLGDYVTFMTLIEALSNHGKLDEAC 214
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
Y + G +P + LI A K D+ + + + + + + YN++++ +
Sbjct: 215 ELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGY 274
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
+G QM D +T+ L+ G++ A + +L S N
Sbjct: 275 CKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNA 334
Query: 427 SFYNAVISACIKADDLME 444
+ Y +I A + E
Sbjct: 335 ATYTTIIQGLYDAQRMEE 352
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 134/328 (40%), Gaps = 5/328 (1%)
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
E A EM G+ P +L C+ ID+A +M ++ C+P + +Y+T
Sbjct: 2 EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSM-GCEPTIVSYNT 60
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
+I + + + M + P+ + ++ G+ KAG +L+ L+
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF 120
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
+PDV+ +++ + G +D + E+ G P+ + +LI K D+
Sbjct: 121 --RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEA 178
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+ E MRK T+ +IEA S+ G + +M G + + LI
Sbjct: 179 YELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFA 238
Query: 401 YANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
AG + + ++A + YN+++ K + + ++ +M E PD
Sbjct: 239 LCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPD 298
Query: 461 SETFSIMTEAYAKEGMNDKVYALEQEKL 488
+T++I+ +++ D ALE KL
Sbjct: 299 IQTYNILVAGFSRANRLDD--ALELFKL 324
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A +F+ + E+ P +Y L+ LGK+G+ A F EM++ GI P YT+L
Sbjct: 696 RAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSL 755
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + + I EA + M L PDV YS LI +D+ + ++Q+M +R
Sbjct: 756 IYSLAKAGRIPEAKKLVEDMVKL-GVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRG 814
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERV 272
PN VT ++ G+ AG +E V
Sbjct: 815 CAPNEVTYKVLRRGFRAAGRALDLEAV 841
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 148/345 (42%), Gaps = 38/345 (11%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+ P + +L++ L ++G+ + A + F +M + G +P +Y LL C + +++A
Sbjct: 146 HHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQAN 205
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+MK+ +C PDV TY+TL+ A A R E L++ M PN +T + ++ G
Sbjct: 206 TLFAEMKS-HSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHG 264
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ G ++ V MLE A CKP+ +T T++S +V +EK I P
Sbjct: 265 LCRTGELEKALEVFGSMLE-AGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPP 323
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRK-LQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
+ +N LI Y K+ D+ + M T T+N +I+ F +G
Sbjct: 324 DAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANEL 383
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
+M +G+ AD+ T+ LI G + A K
Sbjct: 384 VAEMGTKGLAADSCTYRILIAGLSRA--------------------------------TK 411
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
D+ +E VYK+M+EK D + K G D+ YA+
Sbjct: 412 LDEALE---VYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAV 453
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 145/327 (44%), Gaps = 11/327 (3%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
+S E AR+V+ MVE G +P Y L+ + +DE+ L++M + P
Sbjct: 55 FARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEM-VMRGQTP 113
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF-DQMERV 272
+ YS+L++A A R + +L+ +M P+ + ++ G +AG D ER
Sbjct: 114 SMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERF 173
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
+ C+P+V N +L + GQ++ + + ++ P+ T+N L+ A
Sbjct: 174 --KQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVC 231
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K R ++ + E MR + T++ +I G+ + F M G K +
Sbjct: 232 KARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKY 291
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDLMEMERVY 449
T+ LI+G A KVI + L K+ I + YN++I+ K + E E++Y
Sbjct: 292 TYTTLISGLCRA---EKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLY 348
Query: 450 KRMK-EKHCRPDSETFSIMTEAYAKEG 475
+ M +P TF+ + + + K G
Sbjct: 349 REMSGGAGLQPTIVTFNTLIDGFCKLG 375
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 114/272 (41%), Gaps = 2/272 (0%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
Q QA +F +K P TY LL + K+ + E K+F M G P +
Sbjct: 200 QLEQANTLFAEMKSHSC-SPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITF 258
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
+ L+ CR +++A M C+P+ YTY+TLI A + L++ M
Sbjct: 259 STLIHGLCRTGELEKALEVFGSMLE-AGCKPNKYTYTTLISGLCRAEKVIQARELFEKMT 317
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
+ + P+ V N ++ GY K G D+ E++ M A +P + T NT++ F G++
Sbjct: 318 QACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKL 377
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ G+ ++ T+ ILI + D+ V + MR+ +F + +
Sbjct: 378 GRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSF 437
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
+ G+ FE G + +TF
Sbjct: 438 VGGLCKTGNIDQAYAVFEATRKSGAVPNPETF 469
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 119/275 (43%), Gaps = 3/275 (1%)
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
N +V+TYS++IK+ V + E + ++M P+ N V+ G+ ++ ++
Sbjct: 5 NIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKA 64
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
V M+ES KPD + + ++ A G++D + + G P + ++ L+
Sbjct: 65 REVYQHMVESGY-KPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVR 123
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
A K R D SS+ + M + + +I G K F+QM G +
Sbjct: 124 ALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQP 183
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
+ + L++G ++G + + + +V YN ++ A KA + E +++
Sbjct: 184 NVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLF 243
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
+ M+ P+ TFS + + G +K ALE
Sbjct: 244 EAMRAAGYVPNVITFSTLIHGLCRTGELEK--ALE 276
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/433 (21%), Positives = 179/433 (41%), Gaps = 72/433 (16%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
Q+ A ++ + LKE+ P ++ +L LGK + + A +F M ++ EP Y
Sbjct: 337 QFENAYKLLDQLKERGCI-PSVVSFNSILTCLGKKRKVDEALTLFEAMKKDA-EPNSSTY 394
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
++ C ++EA++ ++M+ P++ T + ++ A +FE +++
Sbjct: 395 NIIIDMLCMAGKVEEAYMIRDEMEH-AGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETAS 453
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA---------------------- 280
+R PN+VT ++ G GK G D R+ ML++
Sbjct: 454 QRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKE 513
Query: 281 ------------TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
C+PD+ +NT + G V+ +E + +G P+ R+++ILI
Sbjct: 514 DGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILI 573
Query: 329 GAYGKK----------------------RMY-------------DKMSSVMEYMRKLQFP 353
K R Y DK V+E M+ + P
Sbjct: 574 HGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVP 633
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
T +TY ++I+ + + FE+ ++G++ + + LI+G+ G +
Sbjct: 634 PTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLI 693
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ K + NV +N+++ A +KA+++ E ++ MKE C P++ T+SI+ +
Sbjct: 694 LEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCR 753
Query: 474 EGMNDKVYALEQE 486
+K + QE
Sbjct: 754 VQKYNKAFVFWQE 766
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 135/296 (45%), Gaps = 4/296 (1%)
Query: 110 TVAETFSDHVLKKQWFQ-ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
T+ T+ D V K + +FE +K F P +Y L+ L K+GQ +F+
Sbjct: 532 TLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFL-PDVRSYSILIHGLTKAGQARETSSIFH 590
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
M ++G Y A++ +C++ +D+A+ L +MK + P V TY ++I
Sbjct: 591 AMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMK-VKRVPPTVATYGSIIDGLAKI 649
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
R + L+++ + + N + + ++ G+GK G D+ +L M++ P+V+T
Sbjct: 650 DRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGL-TPNVYT 708
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
N+++ +++ ++ + P T T++ILI + + Y+K + M+
Sbjct: 709 WNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQ 768
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
K TY +I + +G+ FE+ A G D +F LI G ++A
Sbjct: 769 KQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHA 824
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 164/387 (42%), Gaps = 46/387 (11%)
Query: 112 AETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMV 171
A+ S V ++ A +V ++ F +P Y L+ + ++ QPE A ++ +M
Sbjct: 151 ADLVSALVRTRRLDDAERVIAAMRRLKF-RPAFSAYTVLIGAMAEARQPERALELLRQMQ 209
Query: 172 EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNC-QPDVYTYSTLIKACVDAMR 230
E G E L+T L+ A R ++ A ++++K +C +PD+ Y+ I A
Sbjct: 210 EVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKG--SCLEPDIVLYNVCIDCFGKAGN 267
Query: 231 FELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMN 290
++ + ++ + + P+ V+ ++ KAG + E L G +E+ P + N
Sbjct: 268 VDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEE-LFGQMETERAVPCAYAYN 326
Query: 291 TILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
T++ + + GQ + + ++ + G P +FN ++ GKKR D+ ++ E M+K
Sbjct: 327 TMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKD 386
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
P SSTYN +I+ G + ++M +AGLF +
Sbjct: 387 AEP-NSSTYNIIIDMLCMAGKVEEAYMIRDEME-------------------HAGLFPNL 426
Query: 411 ISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
++ N ++ KA +++ ++ C P+S T+ + +
Sbjct: 427 LT----------------VNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDG 470
Query: 471 YAKEGMNDKVYALEQEKLQMLLEASGH 497
K+G D Y L + L +GH
Sbjct: 471 LGKKGNVDDAYRLFENMLD-----TGH 492
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 159/389 (40%), Gaps = 37/389 (9%)
Query: 117 DHVLKKQWFQ-ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
D + K + F+ A ++FE Q P TY L+ LGK G + A ++F M++ G
Sbjct: 434 DRLCKAKKFEPAYEMFET-ASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGH 492
Query: 176 EPTPELYTALLAAYCRNSLIDEA---FVTLNQMKTLPNCQ-------------------- 212
P +YT+L+ + + ++ F +N+ P+
Sbjct: 493 NANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRA 552
Query: 213 -----------PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
PDV +YS LI A + +++ M ++ + N V+ G+
Sbjct: 553 IFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFC 612
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K+G D+ VL M + P V T +I+ A ++D +E+ ++ GI+
Sbjct: 613 KSGKLDKAYEVLEEM-KVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNV 671
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
++ LI +GK D+ ++E M K T+N++++A + F+
Sbjct: 672 IVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQS 731
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M +T T+ LING ++K + K + NV Y +I+ K +
Sbjct: 732 MKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGN 791
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEA 470
+ + +++R K PD+ +F+ + E
Sbjct: 792 ITDACSLFERFKANGGTPDAASFNALIEG 820
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 67/174 (38%), Gaps = 6/174 (3%)
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
ME+ E+ G L+ A + R D V+ MR+L+F S Y +I
Sbjct: 131 MEKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIG 190
Query: 365 AFSDMGDAKHMEYTFE---QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
A M +A+ E E QM G + F L+ A G ++ V
Sbjct: 191 A---MAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSC 247
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ ++ YN I KA ++ + + +K + +PD +++ M K G
Sbjct: 248 LEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAG 301
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 160/347 (46%), Gaps = 4/347 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P+ TY L+ + G E A ++ +EMV GIE ++ LL C+ +++A
Sbjct: 308 KPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALE 367
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ +M +PD TYS LI+ L +M +R + P +T ++++ G
Sbjct: 368 IMQEMME-KGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGL 426
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ G +L M+ + KP+ T+++ A +G+V+ E+ R GI P+
Sbjct: 427 CRCGNLQGTNAILREMVMNGL-KPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPD 485
Query: 321 TRTFNILIGAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+N LI + K KRM + + +ME + + P + TY I+ +S G+ + + F
Sbjct: 486 VFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRP-NAHTYGAFIDGYSKAGEMEIADRYF 544
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
+M + G+ + + LI G+ G + S R ++ ++V Y+ +I +
Sbjct: 545 NEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRN 604
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ E ++ ++EK P++ T++ + K+G DK L +E
Sbjct: 605 GKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEE 651
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 158/381 (41%), Gaps = 40/381 (10%)
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
+ EML+ + +P TY + K+G+ E+A + FNEM+ G+ P +YTAL+ +
Sbjct: 509 LMEMLERR--LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGH 566
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
C+ + EAF + + Q DV TYS LI + ++ ++ E+ + PN
Sbjct: 567 CKEGNVTEAFSVFRFILSRRVLQ-DVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPN 625
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
T N ++ G K G D+ ++L M PD+ T N ++ G+++ + +
Sbjct: 626 AFTYNSLISGSCKQGNVDKASQLLEEMCIKGI-NPDIVTYNILIDGLCKAGEIERAKNLF 684
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
+ G+ P T+ ++ Y K + ++E M P + YN ++
Sbjct: 685 DDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKE 744
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFY 429
+ F++M +G A T +F LI GY +G + + + Q N Y
Sbjct: 745 EKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTY 803
Query: 430 NAVISACIKADDLMEMERVYKRMKEKHC-------------------------------- 457
++I KA + E +R++ M+E++
Sbjct: 804 TSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVA 863
Query: 458 ---RPDSETFSIMTEAYAKEG 475
PD T+ +M +AY +EG
Sbjct: 864 KGIEPDKMTYYVMIDAYCREG 884
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 157/373 (42%), Gaps = 35/373 (9%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKT-- 207
LL + K+G+ E A ++ EM+E+G+EP + Y+ L+ +CR + AF L++MK
Sbjct: 352 LLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRK 411
Query: 208 --------------LPNC------------------QPDVYTYSTLIKACVDAMRFELIE 235
L C +P+ Y+TL+ A R E
Sbjct: 412 LAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESR 471
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
+ + M E+ + P+ N ++ G+ KA ++ L MLE +P+ T +
Sbjct: 472 MILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRL-RPNAHTYGAFIDG 530
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
++ G++++ +R++ + + G+ P + LI + K+ + SV ++ +
Sbjct: 531 YSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQD 590
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
TY+ +I S G F ++ +G+ + T+ LI+G G K +
Sbjct: 591 VQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 650
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
I ++ YN +I KA ++ + ++ ++ + P+ T++ M + Y K
Sbjct: 651 EMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK 710
Query: 476 MNDKVYALEQEKL 488
+ L +E L
Sbjct: 711 NPTAAFQLLEEML 723
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 162/368 (44%), Gaps = 22/368 (5%)
Query: 126 QALQVFEMLKEQPF-YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+A+ VF L + F ++P + LL L K + EL KVF+ M + P YT
Sbjct: 172 EAVNVF--LGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTN 229
Query: 185 LLAAYCRNS-----------------LIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
+++A+C+ L+DEA + L + PD+YTY LI
Sbjct: 230 MISAHCKVGNVKDAKRVLLEMGEKARLLDEA-IELKRSMVDKGLVPDLYTYDILINGFCM 288
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
R + + +M + + P +T N ++ G+ + G +Q R+ M+ + ++
Sbjct: 289 EKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGI-EANLI 347
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
NT+L+ G+++ ++ G++P+++T+++LI + + + + +++ M
Sbjct: 348 IWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEM 407
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
+K + T TY+ +I G+ + +M G+K + + L+ +A G
Sbjct: 408 KKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRV 467
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ + + I +V YN++I KA + E M E+ RP++ T+
Sbjct: 468 EESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAF 527
Query: 468 TEAYAKEG 475
+ Y+K G
Sbjct: 528 IDGYSKAG 535
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 141/323 (43%), Gaps = 39/323 (12%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H + +A VF + + Q + TY L+ L ++G+ A +F+E+ E+G+ P
Sbjct: 566 HCKEGNVTEAFSVFRFILSRRVLQDVQ-TYSVLIHGLSRNGKMHEAFGIFSELQEKGLLP 624
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
Y +L++ C+ +D+A L +M + PD+ TY+ LI A E + L
Sbjct: 625 NAFTYNSLISGSCKQGNVDKASQLLEEM-CIKGINPDIVTYNILIDGLCKAGEIERAKNL 683
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
+ D++ R +TPN VT ++ GY K+ ++L ML PD + N IL+
Sbjct: 684 FDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGV-PPDAFIYNVILNFCC 742
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP---- 353
+ + + +++ G T +FN LI Y K + + ++E M + QF
Sbjct: 743 KEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHV 801
Query: 354 ---------------------W----------TSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
W T+ TY +++ + ++G+ + FE+M
Sbjct: 802 TYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEM 861
Query: 383 HAEGMKADTKTFCCLINGYANAG 405
A+G++ D T+ +I+ Y G
Sbjct: 862 VAKGIEPDKMTYYVMIDAYCREG 884
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 114/247 (46%), Gaps = 3/247 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
P TY L+ L K+G+ E A+ +F+++ G+ P Y A++ YC++ AF
Sbjct: 658 NPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQ 717
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +M L PD + Y+ ++ C +FE L+Q+M E+ +TV+ N ++ GY
Sbjct: 718 LLEEM-LLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGY 775
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K+G + +L M+E P+ T +++ G + +R + + + + P
Sbjct: 776 CKSGKLQEANHLLEEMIEKQFI-PNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPT 834
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+T+ L+ Y ++S++ E M TY +I+A+ G+ +
Sbjct: 835 AKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKD 894
Query: 381 QMHAEGM 387
++ +GM
Sbjct: 895 EILVKGM 901
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 155/345 (44%), Gaps = 22/345 (6%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L SG ++A +F+ M +G+ P Y AL+ N I AFV
Sbjct: 352 EPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFV 411
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKA-CV--DAMRFELIETLYQDMDERSVTPNTVTQNIVL 257
LN M C P++ TY+ +IK C+ D + L+ +M +R + N VT N ++
Sbjct: 412 VLNLMGR-NGCSPNIVTYNEMIKGYCILGDPKKAMLV---MNNMLQRGHSANLVTYNTII 467
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
GY +G R+L ++ CKPD W+ ++ F +++ + + + G+
Sbjct: 468 KGYCDSGNTTSALRILD-LMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 526
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P T+ LI Y K D +S++E+M++ TYN +I + + E
Sbjct: 527 CPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE 586
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISSVRLASKLQIAENVSFYN 430
+ M EG+ + T+ +I+G G +F+K+I L N+ Y+
Sbjct: 587 LCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCL-------PNLLTYS 639
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++I A + + E E ++ ++ PD T+ M EAY G
Sbjct: 640 SLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSG 684
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 145/369 (39%), Gaps = 37/369 (10%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP Y ++ L K G A + ++ E + P YT+++ +CR +D A
Sbjct: 212 QPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQ 271
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
NQM C+P+ TYSTLI D+ R L ++M + P T +
Sbjct: 272 VFNQMAK-EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
G ++ R+ M ++ C+P+V+T ++S G + + + + G+ P
Sbjct: 331 CDMGCYEDAWRLFVDM-KNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPN 389
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T T+N LI + R V+ M + TYN +I+ + +GD K
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN 449
Query: 381 QMHAEGMKADTKTFCCLINGYANAG----------------------LFHKVISSVRLAS 418
M G A+ T+ +I GY ++G + ++I S
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509
Query: 419 KLQ-------------IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
K++ + N Y A+I K + L + + MK CRP+ +T++
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 569
Query: 466 IMTEAYAKE 474
++ K+
Sbjct: 570 VLIHGLTKQ 578
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 101/253 (39%), Gaps = 3/253 (1%)
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
Y M V PN + N V+ K G E ++ + ES PD +T +++
Sbjct: 203 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEM-SPDTFTYTSMILGHC 261
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
K +D + + + G +P T T++ LI G R+ + + E + P T+
Sbjct: 262 RKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILP-TA 320
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
T I A DMG + F M +G + + T+ LI+G +G+ I
Sbjct: 321 HTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHR 380
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
S+ + N YNA+I+ ++ + V M C P+ T++ M + Y G
Sbjct: 381 MSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGD 440
Query: 477 NDKVYALEQEKLQ 489
K + LQ
Sbjct: 441 PKKAMLVMNNMLQ 453
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 109/285 (38%), Gaps = 26/285 (9%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL++F + EQ P TY L+ LG+ G+ E A +F E+ G+ P Y ++
Sbjct: 619 ALEMFNKMIEQGCL-PNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMI 677
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
AY + ++ AF L +M CQP ++TY LIK ++ Y D+R
Sbjct: 678 EAYIMSGKVEHAFNFLGRMIK-AGCQPTLWTYGVLIKG---------LKNEYLLADQRLA 727
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
V N +G V+S L V N ++S + G
Sbjct: 728 ALPDVVPNC---SFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAG------ 778
Query: 307 RWYE------KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
RW+E + G+ P+ +N L+ + + R D V ++M + Y
Sbjct: 779 RWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYK 838
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
+I A + K TFE M D LI+G G
Sbjct: 839 ELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 90/218 (41%), Gaps = 14/218 (6%)
Query: 267 DQMERVLS--GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
+ M R +S ML + + ++ + +L + G + Y + + G+ P +
Sbjct: 159 EAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIY 218
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
N +I A K ++M+ + + + + TY ++I D F QM
Sbjct: 219 NAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAK 278
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVR---LASKLQIAENVSFYNAVISACIKADD 441
EG + +T T+ LING ++G ++ +R L L A + +I+ C D
Sbjct: 279 EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCT--GPIIALC----D 332
Query: 442 LMEME---RVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ E R++ MK K C P+ T++ + G+
Sbjct: 333 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGI 370
>gi|125560423|gb|EAZ05871.1| hypothetical protein OsI_28108 [Oryza sativa Indica Group]
Length = 608
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/484 (22%), Positives = 216/484 (44%), Gaps = 32/484 (6%)
Query: 2 GMASASASLSFSSSLLPSPLP-----HPHDTKTNKHRAQVPNFNLIHCSVTSTNKHTSFS 56
+ A + LSFSSSL + + H K+++ V + L K
Sbjct: 6 AIGGARSPLSFSSSLCNAKVSCGLALHNVKIKSSRRLEVVCHGMLTTRKFMQKKKKEEVY 65
Query: 57 SESAVAAKKRLWK----EGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVA 112
++A A+++ W+ E E G + + + RSK+ P+ + V
Sbjct: 66 KDAADEAEQKNWRMMMREIEESGSAVSILKTQRSKKEPLPR---------------DAVL 110
Query: 113 ETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE 172
T K+W ++ E L+ Q ++ E ++ L+ GK G A +V M +
Sbjct: 111 GTLMRFKQLKKWNLVSEILEWLRTQHWWNFSEMDFLMLVTAYGKLGDFSRAERVLKYMNK 170
Query: 173 EGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE 232
+G +P+ TAL+ AY R +A +M+T +P TY ++K+ V+ +++
Sbjct: 171 KGYKPSVISQTALMEAYGRAKQYRKAEAVFRRMQT-SGPEPSAVTYQIILKSFVEGDKYK 229
Query: 233 LIETLYQDM-DER--SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM 289
E +++D+ +E+ S P+ ++++ Y KAG + Q ++ + M E V T
Sbjct: 230 EAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLSTV-TF 288
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
N+++S + +V + Y++ + + P+ ++++LI AYGK R ++ +V E M
Sbjct: 289 NSLMSFETDYKEVSNI---YDQMQRTALKPDVVSYSLLIKAYGKARREEEALAVFEEMLD 345
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
T +YN +I+AF+ G + F+ M ++ D ++ ++ Y NA
Sbjct: 346 AGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRVEPDLCSYTTMVLAYVNASDMDG 405
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
R + + NV Y ++ K +++ + RVY+RM+ + P+ ++ + +
Sbjct: 406 AEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIYTTIMD 465
Query: 470 AYAK 473
+ +
Sbjct: 466 VHGR 469
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 155/379 (40%), Gaps = 38/379 (10%)
Query: 133 MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRN 192
++ E P +P TY L+ L G+ A V +EM+ P YT LL A C+
Sbjct: 22 LVAEMPV-EPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKR 80
Query: 193 SLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVT 252
S +A L++M+ C PD+ TY+ ++ R + +++ PNTV+
Sbjct: 81 SGYKQAMKLLDEMRD-KGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVS 139
Query: 253 QNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF 312
NIVL G A ++ E ++ M + C P+V T N ++S KG V+ E+
Sbjct: 140 YNIVLKGLCTAERWEDAEELMGEMGQKG-CPPNVVTFNMLISFLCRKGLVEPALEVLEQI 198
Query: 313 RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM-RKLQFPWTSS-------------- 357
+G P + ++N L+ A+ K++ DK + ++ M + +P S
Sbjct: 199 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEV 258
Query: 358 --------------------TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
+YN VI+ + G K +M ++G++ D T+ +
Sbjct: 259 DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 318
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
G I + + I N YNA+I K + ++ M C
Sbjct: 319 AAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGC 378
Query: 458 RPDSETFSIMTEAYAKEGM 476
P+ T++I+ E A EG+
Sbjct: 379 MPNESTYTILIEGLAYEGL 397
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 133/305 (43%), Gaps = 5/305 (1%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y A++A YC +D A + +M +PD YTY+TLI+ R + +M
Sbjct: 3 YNAMVAGYCGAGQLDAARRLVAEMPV----EPDAYTYNTLIRGLCGRGRTANALAVLDEM 58
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
R P+ VT I+L K + Q ++L M + C PD+ T N +++ +G+
Sbjct: 59 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKG-CTPDIVTYNVVVNGICQEGR 117
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
VD + + ++G +P T ++NI++ ++ +M M + P T+N
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+I G + EQ+ G ++ ++ L++ + K ++ + L
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
++ YN +++A ++ ++ + ++K+K C P +++ + + K G +
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297
Query: 482 ALEQE 486
L E
Sbjct: 298 ELLNE 302
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 163/343 (47%), Gaps = 20/343 (5%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA--- 198
P TY L+ + G A ++F+EM+E+ I PT +YT L+ C S I EA
Sbjct: 191 PNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESM 250
Query: 199 FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
F T+ LPN +YTY+T++ + LY +M + PN VT I++
Sbjct: 251 FRTMRNSGMLPN----LYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILID 306
Query: 259 GYGKAGMFDQMERVLSGMLESAT--CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG 316
G K D+M +++ A+ P+++ N ++ + G + + +
Sbjct: 307 GLCKT---DEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363
Query: 317 IDPETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
I P+ T++ILI G G RM ++ +++ M+K F + TYN +I+ + G+ +
Sbjct: 364 ILPDVFTYSILIKGLCGVDRM-EEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKA 422
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA---ENVSFYNAV 432
QM +G++ + TF LI+GY AG K+ +++ L +++ I +V Y A+
Sbjct: 423 IEVCSQMTEKGIEPNIITFSTLIDGYCKAG---KMEAAMGLYTEMVIKGLLPDVVAYTAL 479
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
I K + E R++K M+E P+ T S + + K+G
Sbjct: 480 IDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDG 522
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 144/351 (41%), Gaps = 6/351 (1%)
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE-EGIEPTPELYTALLAA 188
+ +L Y L+ L KS + + VFN + E + TP ++ L+ A
Sbjct: 76 IIHVLTGAKLYAKARCLMRDLIQCLQKSRRSRICCSVFNVLSRLESSKFTPNVFGVLIIA 135
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP 248
+ L++EA +M LP Q L+K RF+ + +Y DM R +P
Sbjct: 136 FSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVKK----GRFDTMWKVYGDMVARGASP 191
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW 308
N VT ++ G + G F + R+ M+E P V ++ + ++ E
Sbjct: 192 NVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKI-FPTVVIYTILIRGLCGESRISEAESM 250
Query: 309 YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD 368
+ RN G+ P T+N ++ Y K K + M T+ +I+
Sbjct: 251 FRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCK 310
Query: 369 MGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSF 428
+ M + G+ + + CLI+GY AG + +S K +I +V
Sbjct: 311 TDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFT 370
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
Y+ +I D + E + + + MK+K P++ T++ + + Y KEG +K
Sbjct: 371 YSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEK 421
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 135/333 (40%), Gaps = 2/333 (0%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L K G+ + KV+ +MV G P Y L+ CR +AF ++M P
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE-KKIFP 226
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
V Y+ LI+ R E++++ M + PN T N ++ GY K + +
Sbjct: 227 TVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELY 286
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
ML P+V T ++ ++ ++ +FG+ P +N LI Y K
Sbjct: 287 XEMLGDGLL-PNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCK 345
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+ S+ + K + TY+ +I+ + + + ++M +G + T
Sbjct: 346 AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+ LI+GY G K I ++ I N+ ++ +I KA + +Y M
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV 465
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
K PD ++ + + + K+G + + L +E
Sbjct: 466 IKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKE 498
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 109/258 (42%), Gaps = 16/258 (6%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A + + +K++ F P TY L+ K G E A +V ++M E+GIEP ++ L
Sbjct: 386 EADGLLQEMKKKGFL-PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTL 444
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ YC+ ++ A +M + PDV Y+ LI + L+++M E
Sbjct: 445 IDGYCKAGKMEAAMGLYTEM-VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVL------------SGMLESATCKPDVWTMNTIL 293
+ PN T + ++ G K G ++ + L+ + C P+ ++
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALI 563
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQF 352
G++ +++ R G+ P+ T ++I G + + D M + ++
Sbjct: 564 QGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGII 623
Query: 353 PWTSSTYNNVIEAFSDMG 370
P SS Y + + + + G
Sbjct: 624 P-NSSVYRVLAKGYEESG 640
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 111/296 (37%), Gaps = 44/296 (14%)
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI 255
++A QM+ + + QPD+ T + + AC D ++ E ++ + R + + N
Sbjct: 731 NKALQLFRQMQ-MDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNS 789
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
++ Y K G R+ G T K DV T +++ A GQ + E + F
Sbjct: 790 LINMYSKCGEIGTARRLFDG-----TQKKDVTTWTSMIVGHALHGQAE------EALQLF 838
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
ET A KR + SS L P T+ V+ A S G +
Sbjct: 839 TEMKETNK-----RARKNKRNGEXESS-------LVLP-NDVTFMGVLMACSHAGLVEEG 885
Query: 376 EYTFEQMHAE-GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVIS 434
+ F M + ++ F C+++ AGL + + K+ + N + ++
Sbjct: 886 KQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTE---AYEFILKMPVRPNAVVWRTLLG 942
Query: 435 ACIKADD-----------LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
AC D E R ++ H + IM+ YA +GM DK
Sbjct: 943 ACSLQGDSNGNGNSNIKIXSEARRQLLELEPSHVGDN----VIMSNLYAAKGMWDK 994
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 20/134 (14%)
Query: 108 VNTVAETFSDHVLKKQWFQALQVFEMLKE---------------QPFYQPKEGTYMKLLV 152
V T H L Q +ALQ+F +KE P + T+M +L+
Sbjct: 815 VTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEXESSLVLPNDVTFMGVLM 874
Query: 153 LLGKSGQPELARKVFNEMVEE-GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNC 211
+G E ++ F M E+ + P + ++ CR L+ EA+ + +M PN
Sbjct: 875 ACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMPVRPN- 933
Query: 212 QPDVYTYSTLIKAC 225
+ TL+ AC
Sbjct: 934 ---AVVWRTLLGAC 944
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 159/349 (45%), Gaps = 5/349 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY LL + KS A V +EM +G P Y ++ CR +D+A
Sbjct: 184 QPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKE 243
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
LN++ + QPD+ +Y+T++K A R++ ++ L+ +M ++ PN VT ++++ +
Sbjct: 244 ILNRLSSY-GFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFF 302
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ GM ++ +VL M + C P+ N +++ +G+VD + +G +P+
Sbjct: 303 CRGGMVERAIQVLQQMSQHG-CTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 361
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T ++ ++ + ++ ++ M + P T+N I G + E
Sbjct: 362 TISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIE 421
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
M G T+ L++G+ G +V S++ L + L N Y +++ A+
Sbjct: 422 LMPEYGCSVGIVTYNALVHGFCVQG---RVDSALELFNNLPCEPNTITYTTLLTGLCHAE 478
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
L + M +K C ++ TF+++ + ++G ++ L + ++
Sbjct: 479 RLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMME 527
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 151/370 (40%), Gaps = 40/370 (10%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E T+ L+ + G E A +V +M + G P L ++ A C+ +D+A+
Sbjct: 290 PNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDF 349
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
LN M + C PD +Y+T+++ A R+E + L +M ++ PN VT N +
Sbjct: 350 LNNMG-MYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILC 408
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G+ +Q +++ M E C + T N ++ F +G+VD E F N +P T
Sbjct: 409 QKGLIEQAIKLIELMPEYG-CSVGIVTYNALVHGFCVQGRVD---SALELFNNLPCEPNT 464
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+ L+ D + ++ M + P + T+N ++ F G + Q
Sbjct: 465 ITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQ 524
Query: 382 MHAEGMKADTKTFCCLINGYANAG-------LFHKVIS---------------------- 412
M G + TF L++G L H ++S
Sbjct: 525 MMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDR 584
Query: 413 ---SVRLASKLQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
++++ +Q + V YN ++ A K + + + M C P+ T+ I
Sbjct: 585 TEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYII 644
Query: 467 MTEAYAKEGM 476
+ E A EG+
Sbjct: 645 LIEGLAHEGL 654
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 124/301 (41%), Gaps = 43/301 (14%)
Query: 123 QWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
+W A ++ EM+++ P E T+ + +L + G E A K+ M E G
Sbjct: 377 RWEHAKELLPEMVRKN--CPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVT 434
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y AL+ +C +D A N + C+P+ TY+TL+ A R + L +M
Sbjct: 435 YNALVHGFCVQGRVDSALELFNNLP----CEPNTITYTTLLTGLCHAERLDAAAELLAEM 490
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV------ 295
++ N VT N+++ + + G ++ +++ M+E C P++ T NT+L
Sbjct: 491 IQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHG-CTPNLITFNTLLDGITKDCN 549
Query: 296 ----------FANKGQ----------VDMMER---------WYEKFRNFGIDPETRTFNI 326
+KG VD++ R ++ G+ P+ +N
Sbjct: 550 SEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNK 609
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
++ A K+ D+ YM STY +IE + G K Y +++A+G
Sbjct: 610 ILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKG 669
Query: 387 M 387
+
Sbjct: 670 V 670
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 111/274 (40%), Gaps = 1/274 (0%)
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
CQP V TY+ L++A + F + +M + TPN VT N+++ G + G D
Sbjct: 182 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 241
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+ +L+ L S +PD+ + T+L + D ++ + + + P TF++L+
Sbjct: 242 KEILN-RLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVR 300
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+ + M ++ V++ M + ++ N VI A G M G
Sbjct: 301 FFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNP 360
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
DT ++ ++ G AG + + + N +N I + + + ++
Sbjct: 361 DTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLI 420
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ M E C T++ + + +G D L
Sbjct: 421 ELMPEYGCSVGIVTYNALVHGFCVQGRVDSALEL 454
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 171/424 (40%), Gaps = 44/424 (10%)
Query: 108 VNTVAETFSDHVLKKQWF------QALQVFEMLKEQ-PFYQPKEGTYMKLLVLLGKSGQP 160
+ V + FS +L K QA + M+ E P Y ++ K G
Sbjct: 176 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDV 235
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
A +F EMV+ GI P Y++++ A C+ +D+A L QM P+ +TY+
Sbjct: 236 NKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVN-KGVLPNNWTYNN 294
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
LI +++ ++++M +S+ P+ VT N+++G K G + V M
Sbjct: 295 LIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKG 354
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
PDV++ N +L+ +A KG + M ++ GI P TFN+LI AY M DK
Sbjct: 355 Q-NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKA 413
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+ MR TY VI A +G F QM +G+ D + CLI G
Sbjct: 414 MIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQG 473
Query: 401 YANAG----------------------LFHKVISSVRLASKLQIAENV------------ 426
+ G LF +I+++ ++ A+N+
Sbjct: 474 FCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPT 533
Query: 427 -SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
Y+ ++ + + RV+ M P+ + + Y K G D+ +L +
Sbjct: 534 AVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFR 593
Query: 486 EKLQ 489
E LQ
Sbjct: 594 EMLQ 597
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 147/347 (42%), Gaps = 4/347 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ ++ +PELA F +++ G+ + LL +C DEA
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 168
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS--VTPNTVTQNIVLGG 259
L C PDV++YS L+K+ D + + L + M E +P+ V N V+ G
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDG 228
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ K G ++ + M++ PD T ++++ +D E + + N G+ P
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGI-PPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 287
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
T+N LI Y + + V + MR+ T+N ++ + G K F
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVF 347
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
+ M +G D ++ ++NGYA G + L IA + +N +I A
Sbjct: 348 DTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANC 407
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALEQ 485
L + ++ M++ +P+ T++ + A + G M+D + Q
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQ 454
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 151/365 (41%), Gaps = 5/365 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
QW +A++VF+ ++ Q P T+ L+ L K G+ + AR VF+ M +G P Y
Sbjct: 304 QWKEAVRVFKEMRRQSIL-PDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 362
Query: 183 TALLAAYC-RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+L Y + L+D L + P + T++ LIKA + + ++ +M
Sbjct: 363 NIMLNGYATKGCLVD--MTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEM 420
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ V PN +T V+ + G D + M++ PD + + ++ F G
Sbjct: 421 RDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGV-APDKYAYHCLIQGFCTHGS 479
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ + + N G+ + F+ +I K ++ + + T+ Y+
Sbjct: 480 LLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSM 539
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+++ + +G + F+ M + G++ + + L+NGY G + +S R +
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 599
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
I + YN +I +A + + + M E + T+SI+ K D+
Sbjct: 600 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAI 659
Query: 482 ALEQE 486
L +E
Sbjct: 660 FLFKE 664
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 137/336 (40%), Gaps = 4/336 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ G + A +FNEM + G++P YT ++AA CR +D+A
Sbjct: 392 PVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEK 451
Query: 202 LNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
NQM PD Y Y LI+ C + E + + M+ + + V + ++
Sbjct: 452 FNQMID-QGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNN-GMHLDIVLFSSIINNL 509
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + + + + P + ++ + G+++ R ++ + GI+P
Sbjct: 510 CKLGRVMDAQNIFD-LTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 568
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+ L+ Y K D+ S+ M + ++ YN +I+ + G + F
Sbjct: 569 DVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFH 628
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M G+ + T+ ++ G F + I + + + ++ N +I+ +
Sbjct: 629 EMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTR 688
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ E + ++ + P T+SIM KEG+
Sbjct: 689 RVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGL 724
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 7/199 (3%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+ L +F EML Q +P Y ++ L ++G+ A+ F+EM E GI Y+
Sbjct: 587 EGLSLFREML--QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSI 644
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
+L +N DEA +++ + N + D+ T +T+I R E + L+ +
Sbjct: 645 VLRGLFKNRCFDEAIFLFKELRAM-NVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 703
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ P VT +I++ K G+ ++ E + S M ++A C+PD +N ++ K ++
Sbjct: 704 GLVPCVVTYSIMITNLIKEGLVEEAEDMFSSM-QNAGCEPDSRLLNHVVRELLKKNEIVR 762
Query: 305 MERWYEKF--RNFGIDPET 321
+ K RNF ++ T
Sbjct: 763 AGAYLSKIDERNFSLEHLT 781
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 172/406 (42%), Gaps = 42/406 (10%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
AL+VF+++ + P +Y L+ L + G+ E A + ++M E+G +P+ YT L
Sbjct: 248 DALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVL 307
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A C LID+AF ++M C+P+V+TY+ LI + E + + M +
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIA-RGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDG 366
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+ +T N ++ GY K G +L+ ++E CKP+V T N ++ G+
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLT-VMEKRACKPNVRTFNELMEGLCRVGKPYKA 425
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++ + G+ P+ ++N+LI ++ + ++ M T+ +I A
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINA 485
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG------LFHKVISSVRLAS- 418
F G A M +G+ D T LI+G N G + + +R+ +
Sbjct: 486 FCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTT 545
Query: 419 ----------------------------KLQIAENVSFYNAVISACIKADDLMEMERVYK 450
KL + +V Y ++ I++ D+ R+ +
Sbjct: 546 PHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLE 605
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
MK C P+ ++I+ + G + E EKL ++ SG
Sbjct: 606 LMKLSGCLPNVYPYTIIINGLCQFGRVE-----EAEKLLSAMQDSG 646
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 141/350 (40%), Gaps = 9/350 (2%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y ++ L K+G E A ++++ G + T+LL +CR + +A + M
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMS 257
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
C P+ +YS LI + R E L M E+ P+T T +++ G+
Sbjct: 258 REGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
D+ + M+ CKP+V T ++ G+++ K GI P T+N
Sbjct: 318 DKAFNLFDEMIARG-CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNA 376
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
LI Y K ++ M K T+N ++E +G + ++M G
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 387 MKADTKTFCCLINGYANAG---LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
+ D ++ LI+G G + +K+++S+ + + + + A+I+A K
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNVAYKLLTSM---NSFDLEPDCLTFTAIINAFCKQGKAD 493
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALEQ-EKLQML 491
M K D T + + + G D ++ LE K++ML
Sbjct: 494 VASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRML 543
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 148/380 (38%), Gaps = 76/380 (20%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L + G+ E A V +MV++GI P+ Y AL+ YC++ + AF
Sbjct: 333 KPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFE 392
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L M+ C+P+V T++ L++ C ++ + L + +D ++P+ V+ N+++ G
Sbjct: 393 LLTVMEK-RACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN-GLSPDIVSYNVLIDG 450
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ G + ++L+ M S +PD T I++ F +G+ D+ + GI
Sbjct: 451 LCREGHMNVAYKLLTSM-NSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISL 509
Query: 320 ETRTFNILIGAY---GKKR-----------------------MYDKMS---------SVM 344
+ T LI GK R + D +S +++
Sbjct: 510 DEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAML 569
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
+ KL + TY +++ GD E M G + + +ING
Sbjct: 570 GKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQF 629
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
G E E++ M++ P+ T+
Sbjct: 630 GRVE-----------------------------------EAEKLLSAMQDSGVSPNHVTY 654
Query: 465 SIMTEAYAKEGMNDKVYALE 484
++M + Y G D+ ALE
Sbjct: 655 TVMVKGYVNNGKLDR--ALE 672
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/350 (19%), Positives = 140/350 (40%), Gaps = 47/350 (13%)
Query: 58 ESAVAAKKRLWKEGEYPGVS--ETSIPGY--RSKRTPIKNLKKKLERKAKAKAWVNTVAE 113
E A +++ K+G +P V I GY + P L +E++A K V T E
Sbjct: 353 EEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA-CKPNVRTFNE 411
Query: 114 TFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE 173
+ ++A+ + + + + P +Y L+ L + G +A K+ M
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGL-SPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSF 470
Query: 174 GIEPTPELYTALLAAYCRNSLID--EAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMR- 230
+EP +TA++ A+C+ D AF+ L K + D T +TLI + +
Sbjct: 471 DLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGI---SLDEVTGTTLIDGVCNVGKT 527
Query: 231 ---FELIETLYQ--------------DM-----------------DERSVTPNTVTQNIV 256
++ETL + DM ++ + P+ VT +
Sbjct: 528 RDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTL 587
Query: 257 LGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG 316
+ G ++G R+L +++ + C P+V+ I++ G+V+ E+ ++ G
Sbjct: 588 VDGLIRSGDISGSFRMLE-LMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSG 646
Query: 317 IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ P T+ +++ Y D+ + M + + Y++++ F
Sbjct: 647 VSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGF 696
>gi|356569143|ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 658
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 171/358 (47%), Gaps = 12/358 (3%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
W +AL + + + ++ Y P Y LL + ++ Q LA +F+EM ++G+ P Y+
Sbjct: 115 WQRALALLDWINDKALYSPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYS 174
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
L+ ++ ++ L D + L QM+ N D+ YS LI + +++ +
Sbjct: 175 TLITSFGKHGLFDSSLFWLQQMEQ-DNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKA 233
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA-NKGQV 302
+++P+ + N ++ +GKA +F + +L M ++A +PD + +T+L+++ N+ V
Sbjct: 234 STISPDLIAYNSMINVFGKAKLFREARLLLQEMRDNA-VQPDTVSYSTLLAIYVDNQKFV 292
Query: 303 DMMERWYEKFRNFGIDP-ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ + ++E N P + T NI+I YG+ M + + MRK+ +YN
Sbjct: 293 EALSLFFEM--NEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYNT 350
Query: 362 VIEAFSD---MGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
++ + + G+A H+ F M ++ ++ + T+ +IN Y K + ++
Sbjct: 351 LLRVYGEADLFGEAIHL---FRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMK 407
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
K I N Y+ +IS KA L ++++++ R D + M AY + G+
Sbjct: 408 KRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERAGL 465
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 183/434 (42%), Gaps = 75/434 (17%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQ---------------------- 159
KQW A +F+ ++++ P TY L+ GK G
Sbjct: 149 KQWHLAHGLFDEMRQKGL-SPDRYTYSTLITSFGKHGLFDSSLFWLQQMEQDNVSGDLVL 207
Query: 160 ----PELARK---------VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
+LARK +F+ + I P Y +++ + + L EA + L +M+
Sbjct: 208 YSNLIDLARKLSDYSKAISIFSRLKASTISPDLIAYNSMINVFGKAKLFREARLLLQEMR 267
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
QPD +YSTL+ VD +F +L+ +M+E + T NI++ YG+ M
Sbjct: 268 D-NAVQPDTVSYSTLLAIYVDNQKFVEALSLFFEMNEAKCPLDLTTCNIMIDVYGQLHMP 326
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR---NFGIDPETRT 323
+ +R+ M +P+V + NT+L V+ G+ D+ FR + + T
Sbjct: 327 KEADRLFWSM-RKMGIQPNVVSYNTLLRVY---GEADLFGEAIHLFRLMQSKDVQQNVVT 382
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
+N +I YGK ++K +++++ M+K + TY+ +I + G F+++
Sbjct: 383 YNTMINIYGKTLEHEKATNLIQEMKKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLR 442
Query: 384 AEGMKADTKTFCCLINGYANAGL-------FHKV-----------ISSVRLASKLQIA-- 423
+ G++ D + +I Y AGL H++ I + A +++ A
Sbjct: 443 SSGVRIDEVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIGILARAGRIEEATW 502
Query: 424 -----------ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
+++S + +I+ K + V+++M+ PDS+ +++ A+
Sbjct: 503 VFRQAFDAREVKDISVFGCMINLFSKNKKYGNVVEVFEKMRVVGYFPDSDVIALVLNAFG 562
Query: 473 KEGMNDKVYALEQE 486
K DK AL ++
Sbjct: 563 KLREFDKADALYRQ 576
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 143/318 (44%), Gaps = 39/318 (12%)
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFD----- 267
P ++ Y+ L++ + A ++ L L+ +M ++ ++P+ T + ++ +GK G+FD
Sbjct: 133 PSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITSFGKHGLFDSSLFW 192
Query: 268 --QME------------------RVLS---------GMLESATCKPDVWTMNTILSVFAN 298
QME R LS L+++T PD+ N++++VF
Sbjct: 193 LQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTISPDLIAYNSMINVFGK 252
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
++ R+ + P+T +++ L+ Y + + + S+ M + + P +T
Sbjct: 253 AKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFFEMNEAKCPLDLTT 312
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
N +I+ + + K + F M G++ + ++ L+ Y A LF + I RL
Sbjct: 313 CNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYNTLLRVYGEADLFGEAIHLFRLMQ 372
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ +NV YN +I+ K + + + + MK++ P++ T+S + + K G D
Sbjct: 373 SKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMKKRGIEPNAITYSTIISIWEKAGKLD 432
Query: 479 KVYALEQEKLQMLLEASG 496
+ L Q+ L +SG
Sbjct: 433 RAAILFQK-----LRSSG 445
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/259 (18%), Positives = 118/259 (45%), Gaps = 7/259 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ +F +++ + Q TY ++ + GK+ + E A + EM + GIEP Y+ +
Sbjct: 363 EAIHLFRLMQSKDV-QQNVVTYNTMINIYGKTLEHEKATNLIQEMKKRGIEPNAITYSTI 421
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
++ + + +D A + ++++ + D Y T+I A A + L ++
Sbjct: 422 ISIWEKAGKLDRAAILFQKLRS-SGVRIDEVLYQTMIVAYERAGLVAHAKRLLHELKR-- 478
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ + ++ +G +AG ++ V ++ K D+ ++++F+ + +
Sbjct: 479 --PDNIPRDTAIGILARAGRIEEATWVFRQAFDAREVK-DISVFGCMINLFSKNKKYGNV 535
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+EK R G P++ +++ A+GK R +DK ++ M + + + ++
Sbjct: 536 VEVFEKMRVVGYFPDSDVIALVLNAFGKLREFDKADALYRQMHEEGCVFPDEVHFQMLSL 595
Query: 366 FSDMGDAKHMEYTFEQMHA 384
+ D +E FE++ +
Sbjct: 596 YGARKDFVMVESLFEKLDS 614
>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
Length = 466
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 154/345 (44%), Gaps = 12/345 (3%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E T+ + ++G + A ++ ++M G P +Y+ L+ + +D+A
Sbjct: 40 PNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL 99
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
LN M C+P+ Y+ +K A R+E I L +M + +PN T ++++
Sbjct: 100 LNTML----CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLC 155
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ + D VL M E C+PD N I++ + +G+VD R + P+
Sbjct: 156 QNNLVDSAVEVLEQM-EKYGCEPDTVNYNIIINSLSERGRVDDALRL---LNSMVCKPDA 211
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
FN ++ + + + S ++ M + P T+N +I+ G + FEQ
Sbjct: 212 LGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQ 271
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M D T+ L+NG++ GL V +++L + ++ YNAV+ +A
Sbjct: 272 MPRYRCTPDIVTYSSLLNGFSEQGL---VEVAIQLFRSMPCKPDIFSYNAVLKGLCRAAR 328
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK-VYALEQ 485
+ + M K C P+ TF+I+ + ++G+ D+ + LEQ
Sbjct: 329 WEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQ 373
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 143/327 (43%), Gaps = 19/327 (5%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E T+ L+ L ++ + A +V +M + G EP Y ++ + +D+A
Sbjct: 142 PNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRL 201
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRF----ELIETLYQDMDERSVTPNTVTQNIVL 257
LN M C+PD ++ ++K A R+ ELI +++D +T NI++
Sbjct: 202 LNSMV----CKPDALGFNAVLKGFCRAERWHDASELIAQMFRD----DCPLIEMTFNILI 253
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
+ G+ + +V M C PD+ T +++L+ F+ +G ++E + FR+
Sbjct: 254 DMLCQNGLVNYATQVFEQM-PRYRCTPDIVTYSSLLNGFSEQG---LVEVAIQLFRSMPC 309
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P+ ++N ++ + ++ ++ M P T+N +I + G
Sbjct: 310 KPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIE 369
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
EQM G D T+ LING++ G ++ +++L S + + YN+ +
Sbjct: 370 VLEQMPNYGSTPDIFTYNALINGFSEQG---RLDDALKLLSTMSCKPDAISYNSTLKGLC 426
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETF 464
+A+ + E + M C P+ TF
Sbjct: 427 RAERWQDAEELVAEMLRNKCTPNEVTF 453
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 122/296 (41%), Gaps = 36/296 (12%)
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
PD YTY+T++K A ++E E L +M PN VT + + + G+ D+ ++
Sbjct: 5 PDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQL 64
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVD--------------------------MME 306
L M C PDV +T+++ F+ +G VD + E
Sbjct: 65 LDQMPRYG-CTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGLCIAE 123
Query: 307 RWYE------KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
RW + + G P TF++LI + + + D V+E M K + YN
Sbjct: 124 RWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYN 183
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+I + S+ G ++ +++ K D F ++ G+ A +H + +
Sbjct: 184 IIINSLSERG---RVDDALRLLNSMVCKPDALGFNAVLKGFCRAERWHDASELIAQMFRD 240
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+N +I + + +V+++M C PD T+S + ++++G+
Sbjct: 241 DCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGL 296
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 13/161 (8%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A+Q+F + +P +Y +L L ++ + E A ++ EMV + P + L+
Sbjct: 300 AIQLFRSMP----CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILI 355
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPN--CQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
+ C+ L+D A L QM PN PD++TY+ LI + R + L M
Sbjct: 356 NSLCQKGLVDRAIEVLEQM---PNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM--- 409
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
S P+ ++ N L G +A + E +++ ML + C P+
Sbjct: 410 SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRN-KCTPN 449
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 72/170 (42%), Gaps = 4/170 (2%)
Query: 317 IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME 376
+ P+T T+N ++ + +++ +M M + + P T+ I +F G
Sbjct: 3 VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAV 62
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
+QM G D + LING++ G V ++ L + + N YNA +
Sbjct: 63 QLLDQMPRYGCTPDVVIYSTLINGFSEQG---HVDQALDLLNTMLCKPNTVCYNAALKGL 119
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK-VYALEQ 485
A+ ++ + M K C P+ TFS++ + + + D V LEQ
Sbjct: 120 CIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQ 169
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 157/355 (44%), Gaps = 3/355 (0%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+++ AL+V + L P TY L+ G A K+ EM+ G+ P
Sbjct: 185 RRKLGLALKVLDQLLLDN-CMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMY 243
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
Y A++ C+ +++ A + + T C+PDV +Y+ L++A ++ +++ E L +
Sbjct: 244 TYNAIIRGMCKEGMVERAAELITSL-TSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAE 302
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M R PN VT +I++ + G D+ VL M+E PD ++ + ++S +G
Sbjct: 303 MFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKEL-TPDTYSYDPLISALCKEG 361
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
++D+ + + G P+ +N ++ A K ++ + +R + P S+YN
Sbjct: 362 RLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYN 421
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+I A GD M ++G+ D T+ LI+ GL + I + +
Sbjct: 422 TMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQS 481
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
V YN V+ K + + ++ M EK CRP+ T+ ++ E G
Sbjct: 482 GFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAG 536
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 163/367 (44%), Gaps = 14/367 (3%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K +A +V E+L+ +P Y ++ K + E A +V N M G P
Sbjct: 117 KNIEKASRVMEILESHT--EPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVT 174
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y ++ + C + A L+Q+ L NC P V TY+ LI+A + L ++M
Sbjct: 175 YNIMIGSLCNRRKLGLALKVLDQL-LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEM 233
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
R + P+ T N ++ G K GM ++ +++ L S CKPDV + N +L F N+G+
Sbjct: 234 LARGLLPDMYTYNAIIRGMCKEGMVERAAELITS-LTSKGCKPDVISYNILLRAFLNQGK 292
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
D E+ + + G +P T++ILI + + D+ SV++ M + + + +Y+
Sbjct: 293 WDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDP 352
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI-----NGYANAGLFHKVISSVRL 416
+I A G + M + G D + ++ NG AN L ++ + +R
Sbjct: 353 LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQAL--EIFNKLR- 409
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ NVS YN +ISA D + M K PD T++ + ++G+
Sbjct: 410 --GMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGL 467
Query: 477 NDKVYAL 483
++ L
Sbjct: 468 VEEAIGL 474
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 148/339 (43%), Gaps = 2/339 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY ++ + G A K+F+EM+ G+EP +T L+ YC+ I +AF
Sbjct: 807 PDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRV 866
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
N M C P+V TY+TLI + L +M + + PN T N ++ G
Sbjct: 867 HNHM-IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 925
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K+G ++ + L G E+A D T T++ + G++D + + G+ P
Sbjct: 926 KSGNIEEAVK-LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTI 984
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
TFN+L+ + M + ++ +M ++T+N +++ + + K ++
Sbjct: 985 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKD 1044
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M + G++ D KT+ L+ G+ NA + + + +VS Y+ +I K
Sbjct: 1045 MCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKK 1104
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+E ++ +M+ D E F ++ K D +
Sbjct: 1105 FVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTI 1143
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 159/367 (43%), Gaps = 7/367 (1%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
L K W ++ E +K++ +P TY ++ LL + + A + F+EM+ +GI P
Sbjct: 720 LDKVW----KLIEKMKQKGL-KPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDT 774
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+YT L+ +C+ I A +M + + PDV TY+ +I L+
Sbjct: 775 IVYTTLVDGFCKRGDIRAASKFFYEMHS-RDITPDVLTYTAIISGFCQIGDMVEAGKLFH 833
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
+M R + P+ +T ++ GY KAG RV + M++ A C P+V T T++ +
Sbjct: 834 EMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQ-AGCSPNVVTYTTLIDGLCKE 892
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G +D + G+ P T+N ++ K ++ ++ + TY
Sbjct: 893 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 952
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+++A+ G+ + +M +G++ TF L+NG+ G+ +
Sbjct: 953 TTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 1012
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
IA N + +N ++ ++L +YK M + PD +T+ + + + +
Sbjct: 1013 KGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKE 1072
Query: 480 VYALEQE 486
+ L QE
Sbjct: 1073 AWFLFQE 1079
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 154/381 (40%), Gaps = 45/381 (11%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE---LYTALLAAYCRNSLIDEAFVTL 202
+ ++LV G PE ARKVF +M+ G+ + + +Y A L+ C + A +
Sbjct: 603 VFFQVLVEFGM--LPE-ARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTA--TAIIVF 657
Query: 203 NQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGK 262
+ + C +V +Y+ +I R L M+ + TP+ ++ + V+ GY +
Sbjct: 658 REFPEVGVCW-NVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCR 716
Query: 263 AGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETR 322
G D++ +++ M + KP+ +T +I+ + ++ E + + GI P+T
Sbjct: 717 FGELDKVWKLIEKMKQKGL-KPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTI 775
Query: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
+ L+ + K+ S M TY +I F +GD F +M
Sbjct: 776 VYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 835
Query: 383 HAEGMKADTKTFCCLINGYANAGLFH----------------KVISSVRLAS-------- 418
G++ D TF L+NGY AG V++ L
Sbjct: 836 LCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 895
Query: 419 -----------KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
K+ + N+ YN++++ K+ ++ E ++ + D+ T++ +
Sbjct: 896 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 955
Query: 468 TEAYAKEGMNDKVYALEQEKL 488
+AY K G DK + E L
Sbjct: 956 MDAYCKSGEMDKAQEILTEML 976
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 105/254 (41%), Gaps = 37/254 (14%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY ++ L KSG E A K+ E G+ YT L+ AYC++ +D+A
Sbjct: 911 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA-- 968
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ + +M + + P VT N+++ G+
Sbjct: 969 ----------------------------------QEILTEMLGKGLQPTIVTFNVLMNGF 994
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
GM + E++L+ ML P+ T N ++ + + + Y+ + G++P+
Sbjct: 995 CLHGMLEDGEKLLNWMLAKGI-APNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPD 1053
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+T+ L+ + R + + + M+ F + STY+ +I+ F F+
Sbjct: 1054 GKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFD 1113
Query: 381 QMHAEGMKADTKTF 394
QM +G+ AD + F
Sbjct: 1114 QMRRDGLAADKEIF 1127
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 14/181 (7%)
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G P+ +++ +I Y + DK+ ++E M++ S TY ++I +
Sbjct: 699 GYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEA 758
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL-------QIAENVSF 428
E F +M +G+ DT + L++G+ G +R ASK I +V
Sbjct: 759 EEAFSEMIGQGILPDTIVYTTLVDGFCKRG-------DIRAASKFFYEMHSRDITPDVLT 811
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
Y A+IS + D++E +++ M + PD TF+ + Y K G + + +
Sbjct: 812 YTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMI 871
Query: 489 Q 489
Q
Sbjct: 872 Q 872
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 76/196 (38%), Gaps = 9/196 (4%)
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
D + V G + + +EK N+G+ + N+ + K +K ++ +
Sbjct: 597 DPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKD--CNKTATAI 654
Query: 345 EYMRKLQFP-----WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
R +FP W ++YN VI +G + M +G D ++ +IN
Sbjct: 655 IVFR--EFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVIN 712
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
GY G KV + + + N Y ++I + L E E + M + P
Sbjct: 713 GYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILP 772
Query: 460 DSETFSIMTEAYAKEG 475
D+ ++ + + + K G
Sbjct: 773 DTIVYTTLVDGFCKRG 788
>gi|414888270|tpg|DAA64284.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 890
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 186/439 (42%), Gaps = 52/439 (11%)
Query: 90 PIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMK 149
P ++ + LE A+ + + A + + + W ++L++F+ ++ Q + +P E +
Sbjct: 108 PRGSIARCLE-TARHRLTLQDFAAVYREFSRRGDWQRSLRLFKYMQRQSWCRPDEHIHAI 166
Query: 150 LLVLLGKSGQPELARK---VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
++ +LG+ G P L K VF+++ E T YT+L+AAY RN+L +EA L+QMK
Sbjct: 167 VIGVLGRQG-PALLDKCLEVFHDLPAE--SRTALSYTSLIAAYARNALHEEARALLDQMK 223
Query: 207 TLPNCQPDVYTYSTLIKACVDA----MRFELIETLYQDMDER---SVTPNTVTQNIVLGG 259
P TY+T++ AC A + F+++ L+ +M SV P+ T N +L
Sbjct: 224 A-TGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDASPSVRPDLTTYNTLLAA 282
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY---------- 309
+ DQ E +L MLE A PD + I+ FA+ G + +
Sbjct: 283 AAVRSLADQSEMLLHTMLE-AGVSPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTA 341
Query: 310 -------------------------EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
+ + G P T+ +L+ YG++ +D + +
Sbjct: 342 DASAYLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLF 401
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
MR P ++TYN + F D G K + F M G++ D T ++ +
Sbjct: 402 REMRT-AVPPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPDMVTCENVMAACGHG 460
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
GL + ++ + Y ++ A A E + M E P ET+
Sbjct: 461 GLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETY 520
Query: 465 SIMTEAYAKEGMNDKVYAL 483
+ + AYA+ G+ + A+
Sbjct: 521 NALAFAYARGGLFQEAEAI 539
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 110/292 (37%), Gaps = 39/292 (13%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y+ L+ + G A V +M +G PT Y LL Y R D +M+
Sbjct: 346 YLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMR 405
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
T PD TY+ L + D F+ + L+ DM + V P+ VT V+ G G+
Sbjct: 406 T--AVPPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPDMVTCENVMAACGHGGLH 463
Query: 267 DQMERVLS-----GMLESATCK-----------------------------PDVWTMNTI 292
VL GM+ +A P + T N +
Sbjct: 464 GDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNAL 523
Query: 293 LSVFANKGQVDMMERWYEKF-RNFGIDPETRTFNILIGAYGK-KRMYDKMSSVMEYMRKL 350
+A G E + + N GI +F+ LI AY + R+ D + + ME MRK
Sbjct: 524 AFAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYME-MRKS 582
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+F + V+ A+ G + FE++ + +C +++ YA
Sbjct: 583 RFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTMPSVIAYCMMLSLYA 634
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 71/171 (41%), Gaps = 7/171 (4%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P Y L+ LG + E A FN M E G PT E Y AL AY R L EA
Sbjct: 480 PTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAI 539
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
++M Q ++ LI+A R + Y +M + P+ + VL Y
Sbjct: 540 FSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKSRFNPDERSLEGVLNAYC 599
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF 312
AG+ D+ + L+S+ P V +LS++A +RW + +
Sbjct: 600 IAGVIDESKEQFE-ELQSSVTMPSVIAYCMMLSLYARN------DRWTDAY 643
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 158/345 (45%), Gaps = 4/345 (1%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
K G A ++ +M+ EG+EPT +T L++ YC++ +++AF +M P V
Sbjct: 440 KFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNE-KEIAPSV 498
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
YT++ LI L+ +M ER + P VT N+++ GY KA D+ +L
Sbjct: 499 YTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLED 558
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY-GKK 334
ML + PD +T ++S + G+V + + + + ++ L+ Y G+
Sbjct: 559 MLHNGLV-PDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQG 617
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
R+ + +S+ E +++ + +I+ D K + ++M+ +G++ D+ +
Sbjct: 618 RLTEALSASCEMIQR-GINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIY 676
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
+I+ Y+ G F K + L + NV Y A ++ K ++ ++++M
Sbjct: 677 TSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLT 736
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGHWQ 499
+ P+S T+ ++ KEG + L E L+ LL + +
Sbjct: 737 ANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKGLLANTATYN 781
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 149/362 (41%), Gaps = 35/362 (9%)
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCR---------------NSLIDEAFVTLNQM- 205
L +VF+E V G++P P +A++ + C ++ D + VT N +
Sbjct: 201 LVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLI 260
Query: 206 ----------------KTL--PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVT 247
K+L + DV TY TL+ +F+ L +M E
Sbjct: 261 HGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFV 320
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMER 307
P + ++ G K G D ++ L P+++ N +++ +D E
Sbjct: 321 PTEAAVSGLVDGLRKKGNIDSAYDLVVK-LGRFGFLPNLFVYNALINALCKGEDLDKAEL 379
Query: 308 WYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS 367
Y+ + + T++ILI ++ K+ M D S M + T YN++I
Sbjct: 380 LYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHC 439
Query: 368 DMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVS 427
GD E+ + +M EG++ TF LI+GY K R ++ +IA +V
Sbjct: 440 KFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVY 499
Query: 428 FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEK 487
+ A+I +++ E +++ M E+ +P T+++M E Y K DK + L ++
Sbjct: 500 TFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDM 559
Query: 488 LQ 489
L
Sbjct: 560 LH 561
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 148/358 (41%), Gaps = 20/358 (5%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A +++ + E+ P T+ L+ L + + A K+F+EMVE I+PT Y +
Sbjct: 481 KAFKLYREMNEKEI-APSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVM 539
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPN-CQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
+ YC+ +D+AF L M L N PD YTY LI R + D+ ++
Sbjct: 540 IEGYCKAHNMDKAFELLEDM--LHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKK 597
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
++ N + + +L GY G + M++ D+ ++ + +
Sbjct: 598 NLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGI-NMDLVCHAVLIDGAMKQQDMKR 656
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ +K + G+ P++ + +I AY K+ + K ++ M + TY +
Sbjct: 657 LFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMN 716
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISSVRLA 417
+G+ + FE+M + ++ T+ C ++ G L H+++
Sbjct: 717 GLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKG---- 772
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ N + YN +I K L+E +V M E PD T+S + + + G
Sbjct: 773 ----LLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSG 826
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 148/370 (40%), Gaps = 35/370 (9%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+ P E L+ L K G + A + ++ G P +Y AL+ A C+ +D+A
Sbjct: 319 FVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAE 378
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+ M ++ DV TYS LI + ++ E+ + M E + N ++ G
Sbjct: 379 LLYKNMHSMNLPLNDV-TYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLING 437
Query: 260 YGKAGMFDQMERVLSGMLE--------------SATCK--------------------PD 285
+ K G E + + M+ S CK P
Sbjct: 438 HCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPS 497
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
V+T ++ + ++ + +++ I P T+N++I Y K DK ++E
Sbjct: 498 VYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLE 557
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
M + TY +I G + + +H + +K + + L++GY G
Sbjct: 558 DMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQG 617
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ +S+ + I ++ + +I +K D+ + + K+M ++ RPDS ++
Sbjct: 618 RLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYT 677
Query: 466 IMTEAYAKEG 475
M +AY+KEG
Sbjct: 678 SMIDAYSKEG 687
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 11/219 (5%)
Query: 117 DHVLKKQWFQALQVFEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG 174
D +K+Q + L F +LK+ +P Y ++ K G + + + + MV E
Sbjct: 646 DGAMKQQDMKRL--FGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEK 703
Query: 175 IEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELI 234
P YTA + C+ ID A +M T N P+ TY + + +
Sbjct: 704 CFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLT-ANISPNSVTYGCFLDSLTKEGNMKEA 762
Query: 235 ETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILS 294
L+ +M + + NT T NI++ G+ K G + +VLS M E+ PD T +TI+
Sbjct: 763 TDLHHEM-LKGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGI-FPDCITYSTIIY 820
Query: 295 VFANKGQVDM-MERWYEKFRNFGIDPETRTFNILIGAYG 332
G V +E W R G++P++ FN+LI YG
Sbjct: 821 EHCRSGDVGAAVELWDTMLRK-GVEPDSVAFNLLI--YG 856
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 104/249 (41%), Gaps = 37/249 (14%)
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
+FD + V+ ++ T P+V T++ IL+ + ++ +++ N G+ P+ T
Sbjct: 164 VFDAV--VVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTC 221
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
+ +I + + + + + + +M +F + TYN +I G + +
Sbjct: 222 SAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLRE 281
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVI--------------------------------S 412
+G+K D T+C L+ G+ F I S
Sbjct: 282 KGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDS 341
Query: 413 SVRLASKL---QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+ L KL N+ YNA+I+A K +DL + E +YK M + + T+SI+ +
Sbjct: 342 AYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILID 401
Query: 470 AYAKEGMND 478
++ K GM D
Sbjct: 402 SFCKRGMLD 410
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 57/146 (39%), Gaps = 10/146 (6%)
Query: 145 GTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQ 204
TY L+ K G+ A KV +EM E GI P Y+ ++ +CR+ + A V L
Sbjct: 778 ATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAA-VELWD 836
Query: 205 MKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQ---------NI 255
+PD ++ LI C + L DM R + P + Q N
Sbjct: 837 TMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNF 896
Query: 256 VLGGYGKAGMFDQMERVLSGMLESAT 281
++ G G D R+ ML A
Sbjct: 897 LMHGGCVTGEVDTALRLYHSMLTRAV 922
>gi|255551665|ref|XP_002516878.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543966|gb|EEF45492.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 714
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 175/354 (49%), Gaps = 5/354 (1%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQ-PELARKVFNEMVEEGIEPTPE 180
+++ A +V+E ++ Q P T ++ ++ K+G+ + A + F +M +G++ +PE
Sbjct: 276 QRYDDACKVYEAMEAQNV-SPDHVTCSIMITMMRKNGRSAKEAWEFFEKMNRKGVKWSPE 334
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
+ AL+ ++C L +EA + +M + Y+TL+ A + + E +E ++ +
Sbjct: 335 ILGALVKSFCDEGLKNEALIIQVEMAK-KGAFSNAIVYNTLMDAYNKSNQIEEVEGIFAE 393
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M + + P + T NI++ Y + + +E +L M + A +PD + ++S + +
Sbjct: 394 MKAKGLKPTSATFNILMDAYSRRMQPEIVEELLLEM-QDAGLQPDAKSYTCLISAYGRQN 452
Query: 301 QV-DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
++ DM + + + GI P + ++ LI AY ++K S E M+ + TY
Sbjct: 453 KMTDMAANAFLRMKKVGIKPTSHSYTALIHAYSVSGWHEKAYSTFENMQTEGIKPSIETY 512
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+++AF GD + + ++ M +E ++ TF L++G+A G + + + K
Sbjct: 513 TALLDAFRRSGDTQTLMRIWKMMMSEKVEGTRVTFNILLDGFAKQGHYVEARDVISEFGK 572
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
L + V YN +++A + ++ ++ K M + +PDS T+ M AY +
Sbjct: 573 LGLHPTVMTYNMLMNAYARGGQHSKLPQLLKEMATLNLKPDSITYLTMIYAYIR 626
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 129/298 (43%), Gaps = 36/298 (12%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG--------M 265
DV+ Y+ + + R++ +Y+ M+ ++V+P+ VT +I++ K G
Sbjct: 261 DVHVYNASLSGLLYCQRYDDACKVYEAMEAQNVSPDHVTCSIMITMMRKNGRSAKEAWEF 320
Query: 266 FDQMERV-------LSGMLESATCK--------------------PDVWTMNTILSVFAN 298
F++M R + G L + C + NT++ +
Sbjct: 321 FEKMNRKGVKWSPEILGALVKSFCDEGLKNEALIIQVEMAKKGAFSNAIVYNTLMDAYNK 380
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
Q++ +E + + + G+ P + TFNIL+ AY ++ + + ++ M+ + +
Sbjct: 381 SNQIEEVEGIFAEMKAKGLKPTSATFNILMDAYSRRMQPEIVEELLLEMQDAGLQPDAKS 440
Query: 359 YNNVIEAFSDMGDAKHMEYT-FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
Y +I A+ M F +M G+K + ++ LI+ Y+ +G K S+
Sbjct: 441 YTCLISAYGRQNKMTDMAANAFLRMKKVGIKPTSHSYTALIHAYSVSGWHEKAYSTFENM 500
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
I ++ Y A++ A ++ D + R++K M + TF+I+ + +AK+G
Sbjct: 501 QTEGIKPSIETYTALLDAFRRSGDTQTLMRIWKMMMSEKVEGTRVTFNILLDGFAKQG 558
>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
Length = 649
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 151/345 (43%), Gaps = 12/345 (3%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E T+ + ++G + A ++ ++M G P +Y+ L+ + +D+A
Sbjct: 223 PNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL 282
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
LN M C+P+ Y+ +K A R+E I L +M + +PN T ++++
Sbjct: 283 LNTML----CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLC 338
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ + D VL M E C+PD N I++ + +G+VD R + P+
Sbjct: 339 QNNLVDSAVEVLEQM-EKYGCEPDTVNYNIIINSLSERGRVDDALRL---LNSMVCKPDA 394
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
FN ++ + + + S ++ M + P T+N +I+ G + FEQ
Sbjct: 395 LGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQ 454
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M D T+ L+NG++ GL I R + ++ YNAV+ +A
Sbjct: 455 MPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFR---SMPCKPDIFSYNAVLKGLCRAAR 511
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK-VYALEQ 485
+ + M K C P+ TF+I+ + ++G+ D+ + LEQ
Sbjct: 512 WEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQ 556
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 139/330 (42%), Gaps = 44/330 (13%)
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
EMV +G P ++ L+++ C+N+L+D A L QM+ C+PD Y+ +I + +
Sbjct: 317 EMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKY-GCEPDTVNYNIIINSLSER 375
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------MFDQMER---------- 271
R + L M P+ + N VL G+ +A + QM R
Sbjct: 376 GRVDDALRLLNSM---VCKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTF 432
Query: 272 -------VLSGMLESAT----------CKPDVWTMNTILSVFANKGQVDMMERWYEKFRN 314
+G++ AT C PD+ T +++L+ F+ +G V++ + FR+
Sbjct: 433 NILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVA---IQLFRS 489
Query: 315 FGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKH 374
P+ ++N ++ + ++ ++ M P T+N +I + G
Sbjct: 490 MPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDR 549
Query: 375 MEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVIS 434
EQM G D T+ LING++ G ++ +++L S + + YN+ +
Sbjct: 550 AIEVLEQMPNYGSTPDIFTYNALINGFSEQG---RLDDALKLLSTMSCKPDAISYNSTLK 606
Query: 435 ACIKADDLMEMERVYKRMKEKHCRPDSETF 464
+A+ + E + M C P+ TF
Sbjct: 607 GLCRAERWQDAEELVAEMLRNKCTPNEVTF 636
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 137/327 (41%), Gaps = 40/327 (12%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
YTAL+ YCR+ +D+A + M PD YTY+T++K A ++E E L +M
Sbjct: 161 YTALIDGYCRSGRLDDALRLIASMPV----APDTYTYNTVLKGLCIAKKWEEAEELMAEM 216
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
PN VT + + + G+ D+ ++L M C PDV +T+++ F+ +G
Sbjct: 217 IRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYG-CTPDVVIYSTLINGFSEQGH 275
Query: 302 VD--------------------------MMERWYE------KFRNFGIDPETRTFNILIG 329
VD + ERW + + G P TF++LI
Sbjct: 276 VDQALDLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLIS 335
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+ + + D V+E M K + YN +I + S+ G ++ +++ K
Sbjct: 336 SLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERG---RVDDALRLLNSMVCKP 392
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
D F ++ G+ A +H + + +N +I + + +V+
Sbjct: 393 DALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVF 452
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGM 476
++M C PD T+S + ++++G+
Sbjct: 453 EQMPRYRCTPDIVTYSSLLNGFSEQGL 479
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 9/211 (4%)
Query: 144 EGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLN 203
E T+ L+ +L ++G A +VF +M P Y++LL + L++ V +
Sbjct: 429 EMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVE---VAIQ 485
Query: 204 QMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKA 263
+++P C+PD+++Y+ ++K A R+E L +M + PN VT NI++ +
Sbjct: 486 LFRSMP-CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQK 544
Query: 264 GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
G+ D+ VL M + PD++T N +++ F+ +G++D + P+ +
Sbjct: 545 GLVDRAIEVLEQMPNYGS-TPDIFTYNALINGFSEQGRLD---DALKLLSTMSCKPDAIS 600
Query: 324 FN-ILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
+N L G +R D V E +R P
Sbjct: 601 YNSTLKGLCRAERWQDAEELVAEMLRNKCTP 631
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 99/236 (41%), Gaps = 9/236 (3%)
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYE 310
V+ N ++ GY + G ERVL AT +V T ++ + G++D R
Sbjct: 125 VSHNTLVAGYCRDGRLADAERVLGA--ARATGAANVVTYTALIDGYCRSGRLDDALRL-- 180
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
+ + P+T T+N ++ + +++ +M M + + P T+ I +F G
Sbjct: 181 -IASMPVAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNG 239
Query: 371 DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYN 430
+QM G D + LING++ G V ++ L + + N YN
Sbjct: 240 LLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQG---HVDQALDLLNTMLCKPNTVCYN 296
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK-VYALEQ 485
A + A+ ++ + M K C P+ TFS++ + + + D V LEQ
Sbjct: 297 AALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQ 352
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 13/161 (8%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A+Q+F + +P +Y +L L ++ + E A ++ EMV + P + L+
Sbjct: 483 AIQLFRSMP----CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILI 538
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPN--CQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
+ C+ L+D A L QM PN PD++TY+ LI + R + L M
Sbjct: 539 NSLCQKGLVDRAIEVLEQM---PNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM--- 592
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
S P+ ++ N L G +A + E +++ ML + C P+
Sbjct: 593 SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRN-KCTPN 632
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 149/319 (46%), Gaps = 2/319 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ + SGQ + A +F EM+E ++P ++ L+ A C+ ++ EA
Sbjct: 277 PTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSV 336
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+M + +PD+ TYS+LI + ++ TL +M R++ P+ VT +I + +
Sbjct: 337 FGKMIQIAM-EPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFC 395
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K GM + + +++ M+E +P+V T N+++ + Q+D + ++ N G P+
Sbjct: 396 KKGMVSEAQSIINLMIERGL-RPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDV 454
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
++NILI Y K D+ + + M S T+ +I G + F++
Sbjct: 455 LSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKK 514
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M + G D T+ L++G+ G + ++ K Q+ N ++ KA
Sbjct: 515 MGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGK 574
Query: 442 LMEMERVYKRMKEKHCRPD 460
L + + ++ + + +PD
Sbjct: 575 LEDAKELFSSLSIEELQPD 593
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 153/344 (44%), Gaps = 2/344 (0%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
YQP T+ ++ L K G+ A +MVE EP Y+ ++ + C+N L++EA
Sbjct: 205 YQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAV 264
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
M+++ P V TY++LI ++ +++ L+++M E ++ P+ VT +I++
Sbjct: 265 DLFYHMRSI-GISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDA 323
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K G+ + V M++ A +PD+ T ++++ + + I P
Sbjct: 324 LCKEGVVLEALSVFGKMIQIAM-EPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRP 382
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ TF+I + + KK M + S++ M + TYN++++ + F
Sbjct: 383 DVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVF 442
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
+ M +G D ++ LI GY + + S + N + +IS +A
Sbjct: 443 DIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQA 502
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ ++K+M C PD T+S + + K G D+ AL
Sbjct: 503 GRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALAL 546
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 138/310 (44%), Gaps = 22/310 (7%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
QW QA +F+ + E +P T+ L+ L K G A VF +M++ +EP Y
Sbjct: 294 QWKQASILFKEMLEWNM-KPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTY 352
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDM 241
++L+ C++SL E+ LN+M + N +PDV T+S + C M E +++ M
Sbjct: 353 SSLIHGVCKSSLWKESSTLLNEMLS-RNIRPDVVTFSIWVDVFCKKGMVSE-AQSIINLM 410
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
ER + PN VT N ++ GY D+ +V M+ C PDV + N ++ + +
Sbjct: 411 IERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKG-CAPDVLSYNILIKGYCKSER 469
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGA-------YGKKRMYDKMSSVMEYMRKLQFPW 354
+D ++ +++ + G+ P + T LI Y K ++ KM S P
Sbjct: 470 IDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGS-------HGCPP 522
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
TY+ ++ F G FE + +K + L+ G AG K+ +
Sbjct: 523 DLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAG---KLEDAK 579
Query: 415 RLASKLQIAE 424
L S L I E
Sbjct: 580 ELFSSLSIEE 589
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 135/315 (42%), Gaps = 4/315 (1%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A FN+MV P + LLAA R D +M+ VYT + LI
Sbjct: 88 ALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFF-GVSCSVYTLTILI 146
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-MFDQMERVLSGMLESAT 281
L ++ + + P+ +T N ++ G G + + ME++ + S
Sbjct: 147 NCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQL--DYIMSRG 204
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
+P V+T I++ G+ W +K +PE +++I+I + K R+ ++
Sbjct: 205 YQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAV 264
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+ +MR + T TYN++I + G K F++M MK D TF L++
Sbjct: 265 DLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDAL 324
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
G+ + +S ++ + ++ Y+++I K+ E + M ++ RPD
Sbjct: 325 CKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDV 384
Query: 462 ETFSIMTEAYAKEGM 476
TFSI + + K+GM
Sbjct: 385 VTFSIWVDVFCKKGM 399
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 150/341 (43%), Gaps = 12/341 (3%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
++P T+ L+ L G+ A + + ++ G +PT +T ++ C+ A
Sbjct: 170 FKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAI 229
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
V + +M L +C+P+V +YS +I + C + + E ++ Y M ++P VT N ++
Sbjct: 230 VWMKKMVEL-DCEPEVVSYSIIIDSLCKNRLVNEAVDLFYH-MRSIGISPTVVTYNSLIY 287
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
G +G + Q + MLE KPDV T + ++ +G V + K ++
Sbjct: 288 GMCNSGQWKQASILFKEMLEWNM-KPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAME 346
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P+ T++ LI K ++ + S+++ M T++ ++ F G +
Sbjct: 347 PDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSI 406
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI----AENVSFYNAVIS 434
M G++ + T+ L++GY H + R + + A +V YN +I
Sbjct: 407 INLMIERGLRPNVVTYNSLMDGYC----LHSQMDEARKVFDIMVNKGCAPDVLSYNILIK 462
Query: 435 ACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
K++ + E ++++ M K P+S T + + + G
Sbjct: 463 GYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAG 503
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 135/325 (41%), Gaps = 2/325 (0%)
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
L V ++ + G +P+ + L+ C I EA L+ + + QP VYT++ +
Sbjct: 157 LGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMS-RGYQPTVYTHTMI 215
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
+ + + M E P V+ +I++ K + ++ + M S
Sbjct: 216 VNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHM-RSIG 274
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
P V T N+++ N GQ +++ + + P+ TF+IL+ A K+ + +
Sbjct: 275 ISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEAL 334
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
SV M ++ TY+++I K +M + ++ D TF ++ +
Sbjct: 335 SVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVF 394
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
G+ + S + L + + NV YN+++ + E +V+ M K C PD
Sbjct: 395 CKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDV 454
Query: 462 ETFSIMTEAYAKEGMNDKVYALEQE 486
+++I+ + Y K D+ L E
Sbjct: 455 LSYNILIKGYCKSERIDEAKQLFDE 479
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 90/209 (43%), Gaps = 2/209 (0%)
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI-GAYGKKRMYDKMSSVM 344
V+T+ +++ + V + K G P TFN LI G + R+ + M +
Sbjct: 139 VYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQ-L 197
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
+Y+ + T T+ ++ +G ++M + + ++ +I+
Sbjct: 198 DYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKN 257
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
L ++ + + I+ V YN++I + + ++K M E + +PD TF
Sbjct: 258 RLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTF 317
Query: 465 SIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
SI+ +A KEG+ + ++ + +Q+ +E
Sbjct: 318 SILVDALCKEGVVLEALSVFGKMIQIAME 346
>gi|414888267|tpg|DAA64281.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 873
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 186/439 (42%), Gaps = 52/439 (11%)
Query: 90 PIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMK 149
P ++ + LE A+ + + A + + + W ++L++F+ ++ Q + +P E +
Sbjct: 86 PRGSIARCLE-TARHRLTLQDFAAVYREFSRRGDWQRSLRLFKYMQRQSWCRPDEHIHAI 144
Query: 150 LLVLLGKSGQPELARK---VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
++ +LG+ G P L K VF+++ E T YT+L+AAY RN+L +EA L+QMK
Sbjct: 145 VIGVLGRQG-PALLDKCLEVFHDLPAE--SRTALSYTSLIAAYARNALHEEARALLDQMK 201
Query: 207 TLPNCQPDVYTYSTLIKACVDA----MRFELIETLYQDMDER---SVTPNTVTQNIVLGG 259
P TY+T++ AC A + F+++ L+ +M SV P+ T N +L
Sbjct: 202 A-TGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDASPSVRPDLTTYNTLLAA 260
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY---------- 309
+ DQ E +L MLE A PD + I+ FA+ G + +
Sbjct: 261 AAVRSLADQSEMLLHTMLE-AGVSPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTA 319
Query: 310 -------------------------EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
+ + G P T+ +L+ YG++ +D + +
Sbjct: 320 DASAYLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLF 379
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
MR P ++TYN + F D G K + F M G++ D T ++ +
Sbjct: 380 REMRT-AVPPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPDMVTCENVMAACGHG 438
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
GL + ++ + Y ++ A A E + M E P ET+
Sbjct: 439 GLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETY 498
Query: 465 SIMTEAYAKEGMNDKVYAL 483
+ + AYA+ G+ + A+
Sbjct: 499 NALAFAYARGGLFQEAEAI 517
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 110/292 (37%), Gaps = 39/292 (13%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y+ L+ + G A V +M +G PT Y LL Y R D +M+
Sbjct: 324 YLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMR 383
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
T PD TY+ L + D F+ + L+ DM + V P+ VT V+ G G+
Sbjct: 384 T--AVPPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPDMVTCENVMAACGHGGLH 441
Query: 267 DQMERVLS-----GMLESATCK-----------------------------PDVWTMNTI 292
VL GM+ +A P + T N +
Sbjct: 442 GDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNAL 501
Query: 293 LSVFANKGQVDMMERWYEKF-RNFGIDPETRTFNILIGAYGK-KRMYDKMSSVMEYMRKL 350
+A G E + + N GI +F+ LI AY + R+ D + + ME MRK
Sbjct: 502 AFAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYME-MRKS 560
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+F + V+ A+ G + FE++ + +C +++ YA
Sbjct: 561 RFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTMPSVIAYCMMLSLYA 612
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 71/171 (41%), Gaps = 7/171 (4%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P Y L+ LG + E A FN M E G PT E Y AL AY R L EA
Sbjct: 458 PTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAI 517
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
++M Q ++ LI+A R + Y +M + P+ + VL Y
Sbjct: 518 FSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKSRFNPDERSLEGVLNAYC 577
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF 312
AG+ D+ + L+S+ P V +LS++A +RW + +
Sbjct: 578 IAGVIDESKEQFE-ELQSSVTMPSVIAYCMMLSLYARN------DRWTDAY 621
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 163/350 (46%), Gaps = 12/350 (3%)
Query: 129 QVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAA 188
++FE + + P Y L+ K G+ + A +++ EMV G+EP+ Y +LL A
Sbjct: 29 KLFEQMLDNGI-SPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNA 87
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVT 247
+C+ + + EA M +PDV TYST+I C E +E L+ M ER +
Sbjct: 88 FCKETKMKEAMELFKTMAE-KGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCS 146
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMER 307
NTV N ++ G K ++ ++L M PD T NTILS G+V ++
Sbjct: 147 ANTVAYNALINGLCKDENIERAYKLLEEMASKGYV-PDNITYNTILSGLCRMGKVSEAKQ 205
Query: 308 WYEKFRNFGIDPETRTFNILIGA-YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+++ + G P+ +N L+ A Y + + + M + + K P T TYN+++
Sbjct: 206 FFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDT-VTYNSILLGL 264
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF---HKVISSVRLASKLQIA 423
+ + E F++M A G + T+ +++G+ A HKV+ + SK+
Sbjct: 265 ARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEM---SKIGAV 321
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+V YN ++ K + + + ++ M + C PD ++S++ K
Sbjct: 322 PDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCK 371
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 150/351 (42%), Gaps = 4/351 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQ-PELARKVFNEMVEEGIEPTPELYTA 184
+A+++F+ + E+ F +P TY ++ L K+G+ E +F++M+E G Y A
Sbjct: 96 EAMELFKTMAEKGF-EPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNA 154
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ C++ I+ A+ L +M + PD TY+T++ + + + M R
Sbjct: 155 LINGLCKDENIERAYKLLEEMAS-KGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSR 213
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+P+ V N +L K G D+ ++ ++ PD T N+IL A K +D
Sbjct: 214 GYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGY-MPDTVTYNSILLGLARKSNMDE 272
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
E ++K G P T++I++ + + + D V+E M K+ TYN +++
Sbjct: 273 AEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLD 332
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
F M G D ++ ++NG H + ++
Sbjct: 333 GLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVP 392
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+V +N ++ KA L E + + +M C PD ++ + K+G
Sbjct: 393 DVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQG 443
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 136/343 (39%), Gaps = 1/343 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY LL K + + A ++F M E+G EP Y+ +++ C+ + EA
Sbjct: 75 EPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALE 134
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L C + Y+ LI E L ++M + P+ +T N +L G
Sbjct: 135 MLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGL 194
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ G + ++ M S PDV N +L +G+ D + ++ G P+
Sbjct: 195 CRMGKVSEAKQFFDSM-PSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPD 253
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T T+N ++ +K D+ + + M +TY+ V+ E
Sbjct: 254 TVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLE 313
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M G D T+ L++G L K A ++ Y+ V++ K +
Sbjct: 314 EMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTN 373
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ + ++ RM E+ PD TF+I+ + K G D+ L
Sbjct: 374 KVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDL 416
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 115/247 (46%), Gaps = 14/247 (5%)
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
R +PN T +VL + K G ++ ML++ PD N ++ +A KG+VD
Sbjct: 2 RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGI-SPDGIEYNILIDGYAKKGRVD 60
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ---FPWTSSTYN 360
R YE+ + G++P T+N L+ A+ K+ KM ME + + F TY+
Sbjct: 61 EANRLYEEMVSVGLEPSIYTYNSLLNAFCKET---KMKEAMELFKTMAEKGFEPDVVTYS 117
Query: 361 NVIEAFSDMGDA-KHMEYTFEQMHAEGMKADTKTFCCLINGYA---NAGLFHKVISSVRL 416
+I G + +E F +M G A+T + LING N +K++ +
Sbjct: 118 TIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLE--EM 175
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
ASK + +N++ YN ++S + + E ++ + M + PD ++ + +A KEG
Sbjct: 176 ASKGYVPDNIT-YNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGK 234
Query: 477 NDKVYAL 483
D+ L
Sbjct: 235 TDEAMKL 241
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 116/265 (43%), Gaps = 3/265 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A Q F+ + + Y P Y LL L K G+ + A K+F +++ +G P Y ++
Sbjct: 202 EAKQFFDSMPSRG-YSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSI 260
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L R S +DEA +M C P+ TYS ++ A + + + ++M +
Sbjct: 261 LLGLARKSNMDEAEEMFKKM-VASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIG 319
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ VT NI+L G K + D+ + S M+++ C PD+ + + +L+ +V
Sbjct: 320 AVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG-CAPDIVSYSVVLNGLCKTNKVHDA 378
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+++ + P+ TFNIL+ K D+ +++ M YN ++
Sbjct: 379 RVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNG 438
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKAD 390
G + + M +G +D
Sbjct: 439 LRKQGRHIQADRLTQAMKEKGFLSD 463
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 136/322 (42%), Gaps = 21/322 (6%)
Query: 176 EPTPELYT--ALLAAYCRNSLIDEAFVTLNQMKTLPN-CQPDVYTYSTLIKACVDAMRFE 232
E +P YT +L ++C+ + + + QM L N PD Y+ LI R +
Sbjct: 3 ECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQM--LDNGISPDGIEYNILIDGYAKKGRVD 60
Query: 233 LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTI 292
LY++M + P+ T N +L + K + + M E +PDV T +TI
Sbjct: 61 EANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGF-EPDVVTYSTI 119
Query: 293 LSVFANKGQV-DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
+S G+V + +E + K G T +N LI K ++ ++E M
Sbjct: 120 ISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKG 179
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG------ 405
+ + TYN ++ MG + F+ M + G D + L++ G
Sbjct: 180 YVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAM 239
Query: 406 -LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
LF VI+ K + + V+ YN+++ + ++ E E ++K+M C P+ T+
Sbjct: 240 KLFKDVIA------KGYMPDTVT-YNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATY 292
Query: 465 SIMTEAYAKEGMNDKVYALEQE 486
SI+ + + D + + +E
Sbjct: 293 SIVLSGHCRAKKVDDAHKVLEE 314
>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 152/331 (45%), Gaps = 8/331 (2%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ G SG+ + ++F EM E+GI+ +YT ++ C+ AF +++
Sbjct: 3 TYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDEL 62
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
T +V+TY LI A E E L +M R + N + N ++ GY K G+
Sbjct: 63 -TEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGL 121
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D+ +V ++E + D++T+NTI Q + +RW G+ P ++
Sbjct: 122 IDEAFKV-QVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYT 180
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
LI Y K+ + + + + M+K + TYN +I+ S G K ++M A+
Sbjct: 181 TLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAK 240
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDL 442
G+ D T+ L++G +F K+ +V L ++++ + NV Y A+IS K
Sbjct: 241 GIFPDIYTYTSLLHGEC---IFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRS 297
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
E ++Y M E PD ++ + + K
Sbjct: 298 EEAFKLYDEMTEAGLTPDDRVYTSLVSSLHK 328
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 4/154 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P +Y L+ + K G A+K+F EM + G EP Y L+ + + + EA+
Sbjct: 174 PNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYEL 233
Query: 202 LNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
++M+ PD+YTY++L+ C+ + +E L+ ++ ++ + N VT ++ G
Sbjct: 234 RDEMRA-KGIFPDIYTYTSLLHGECIFGKLDDAVE-LFNEVRQKGLPLNVVTYTAIISGL 291
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILS 294
K G ++ ++ M E A PD +++S
Sbjct: 292 SKEGRSEEAFKLYDEMTE-AGLTPDDRVYTSLVS 324
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/251 (19%), Positives = 98/251 (39%), Gaps = 1/251 (0%)
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
V TY+ LI + + + +E ++++M E+ + + +V+ K G + +
Sbjct: 1 VATYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFD 60
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
+ E +V T ++ G+++ E + + G+D +N LI Y K+
Sbjct: 61 ELTEKGLV-ANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKR 119
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
+ D+ V M K F T N + + + + + M +G+ + ++
Sbjct: 120 GLIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSY 179
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
LI+ Y G F + + K N YN +I K + E + M+
Sbjct: 180 TTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRA 239
Query: 455 KHCRPDSETFS 465
K PD T++
Sbjct: 240 KGIFPDIYTYT 250
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 5/140 (3%)
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
+TY +I+ G +E FE+M +G+KAD + +IN G + +
Sbjct: 2 ATYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDE 61
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
++ + NV Y A+I KA ++ E + M+ + + ++ + + Y K G+
Sbjct: 62 LTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGL 121
Query: 477 NDKVYALEQEKLQMLLEASG 496
D+ + K+Q+++E G
Sbjct: 122 IDEAF-----KVQVIMEKKG 136
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 18/168 (10%)
Query: 96 KKLERKAKAKAWVNTVAE-----------TFSDHVLKKQWF-QALQVFEMLKEQPFYQPK 143
+KL + +AK W+ T+ E T D K+ F +A ++F+ +K+ +P
Sbjct: 152 RKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGG-EPN 210
Query: 144 EGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLN 203
TY L+ K G+ + A ++ +EM +GI P YT+LL C +D+A N
Sbjct: 211 AVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFN 270
Query: 204 QM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
++ K LP +V TY+ +I R E LY +M E +TP+
Sbjct: 271 EVRQKGLP---LNVVTYTAIISGLSKEGRSEEAFKLYDEMTEAGLTPD 315
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 163/370 (44%), Gaps = 4/370 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A Q M+ E P TY L++ + + A KVF EM +G YT L
Sbjct: 236 EANQYVSMIVEAGL-DPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHL 294
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C IDEA +MK +C P V TY+ LIKA + R L ++M+E+
Sbjct: 295 IHGLCVERRIDEAMDLFVKMKD-DDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKG 353
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ PN T +++ ++ +L MLE P+V T N +++ + +G ++
Sbjct: 354 IKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGL-MPNVITYNALINGYCKRGMIEDA 412
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E + + P TRT+N LI Y K+ ++ M + + + + P TYN++I+
Sbjct: 413 LDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLP-DVVTYNSLIDG 471
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
G+ M+ G+ D T+ +I+ + + + + N
Sbjct: 472 QCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPN 531
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
V Y A+I KA + E + ++M K+C P+S TF+ + +G + LE+
Sbjct: 532 VVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEE 591
Query: 486 EKLQMLLEAS 495
+ +++ L+ +
Sbjct: 592 KMVKIDLQPT 601
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 160/369 (43%), Gaps = 6/369 (1%)
Query: 109 NTVAETFSDHVL--KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKV 166
N VA T H L +++ +A+ +F +K+ Y P TY L+ L S + A +
Sbjct: 287 NEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCY-PTVRTYTVLIKALCGSERKSEALNL 345
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
EM E+GI+P YT L+ + C +++A L QM P+V TY+ LI
Sbjct: 346 VKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLE-KGLMPNVITYNALINGYC 404
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
E + + M+ R++ PNT T N ++ GY K + M VL+ MLE PDV
Sbjct: 405 KRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMG-VLNKMLERKVL-PDV 462
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
T N+++ G D R + G+ P+ T+ +I + K + ++ + +
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
+ + Y +I+ + G E+M ++ ++ TF LI+G G
Sbjct: 523 LEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGK 582
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ K+ + VS +I +K D R +++M +PD+ T++
Sbjct: 583 LKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTT 642
Query: 467 MTEAYAKEG 475
+ Y +EG
Sbjct: 643 FIQTYCREG 651
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 152/373 (40%), Gaps = 37/373 (9%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL + + ++E+ +P TY L+ L + E AR++ +M+E+G+ P Y AL
Sbjct: 341 EALNLVKEMEEKGI-KPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNAL 399
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ YC+ +I++A + M++ N +P+ TY+ LIK + + L + M ER
Sbjct: 400 INGYCKRGMIEDALDVVELMES-RNLRPNTRTYNELIKGYCKRNVHKAMGVLNK-MLERK 457
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGM----------------------------- 276
V P+ VT N ++ G ++G FD R+LS M
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEAC 517
Query: 277 -----LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
LE P+V ++ + G+V+ EK + P + TFN LI
Sbjct: 518 DLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGL 577
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
+ + + E M K+ T ST +I GD H F+QM + G K D
Sbjct: 578 CTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDA 637
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
T+ I Y G V + ++ ++ Y+++I V KR
Sbjct: 638 HTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKR 697
Query: 452 MKEKHCRPDSETF 464
M + C P TF
Sbjct: 698 MHDTGCEPSQHTF 710
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 157/396 (39%), Gaps = 56/396 (14%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL + + P Y+ +Y LL LL +G + K+ M++ L+ L
Sbjct: 106 ALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVADTLFVLDL 165
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL---YQDMDE 243
CR DE+F + K + C Y+TL+ + RF L++ + Y +M E
Sbjct: 166 ---CRKMNKDESFEL--KYKLIIGC------YNTLLNS---LARFGLVDEMKQVYMEMLE 211
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
V PN T N ++ GY K G ++ + +S ++E+ PD +T +++ + + +D
Sbjct: 212 DKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGL-DPDFFTYTSLIMGYCQRKDLD 270
Query: 304 ----------------------------MMER-------WYEKFRNFGIDPETRTFNILI 328
+ER + K ++ P RT+ +LI
Sbjct: 271 SAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLI 330
Query: 329 GAY-GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
A G +R + ++ V E K P TY +I++ + QM +G+
Sbjct: 331 KALCGSERKSEALNLVKEMEEKGIKP-NIHTYTVLIDSLCSQCKLEKARELLGQMLEKGL 389
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
+ T+ LINGY G+ + V L + N YN +I K + M
Sbjct: 390 MPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMG- 448
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
V +M E+ PD T++ + + + G D Y L
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 110/278 (39%), Gaps = 19/278 (6%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY + + G+ + A + +M E G+ P Y++L+ Y + AFV
Sbjct: 634 KPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFV 693
Query: 201 TLNQMKTLPNCQPDVYTYSTLIK----------------ACV--DAMRFELIETLYQDMD 242
L +M C+P +T+ +LIK CV + M F+++ L + M
Sbjct: 694 VLKRMHD-TGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMV 752
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
E VTPN + ++ G + G E+V M + P N +LS +
Sbjct: 753 EHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKH 812
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ + + G P+ + ILI KK ++ +SV + + + + + +
Sbjct: 813 NEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKII 872
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
I+ G + F M G ++T+ LI G
Sbjct: 873 IDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 163/367 (44%), Gaps = 3/367 (0%)
Query: 104 AKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELA 163
K V T + + L+ ++ A ++F+ +K++ +P TY + L K + E A
Sbjct: 248 VKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNL-KPDCYTYNSFISRLCKERRIEEA 306
Query: 164 RKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIK 223
V +++E G+ P Y AL+ C +D+AF ++M V+TY+ LI
Sbjct: 307 SGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMN-RGIVASVFTYNLLIH 365
Query: 224 ACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK 283
A R E E + ++M E+ V P+ VT NI + GY + G + + M+E +
Sbjct: 366 ALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEK-NIR 424
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P V T +++ VF + ++ E ++K G+ P+ FN LI + D+ +
Sbjct: 425 PTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQL 484
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
++ M + T+N +++ + + + ++M G+K D ++ LI+GY+
Sbjct: 485 LKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSK 544
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
G + L + YNA+I K + E + + M+ K PD T
Sbjct: 545 RGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDST 604
Query: 464 FSIMTEA 470
+ + EA
Sbjct: 605 YLYVIEA 611
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 146/341 (42%), Gaps = 3/341 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
T+ ++ +L + G+ + A+ M G++P Y ++ YC + A M
Sbjct: 219 TFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTM 278
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
K N +PD YTY++ I R E + + E + PN VT N ++ G G
Sbjct: 279 KD-KNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGD 337
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D+ M+ V+T N ++ + +++ E ++ R G++P+ T+N
Sbjct: 338 LDKAFAYRDEMMNRGIVA-SVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYN 396
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
I I Y + K S+ + M + T TY ++I+ F E F++ E
Sbjct: 397 IQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKE 456
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
GM D F LI+G+ G + ++ ++ + +N ++ + + E
Sbjct: 457 GMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEA 516
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALEQ 485
+++ MKE+ +PD +++ + Y+K G M D + ++
Sbjct: 517 KKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDE 557
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 140/328 (42%), Gaps = 2/328 (0%)
Query: 159 QPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTY 218
+P+ A + N M E I P E +LL+ + + I A+ +M + N + + T+
Sbjct: 162 KPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKM-NIKSSIVTF 220
Query: 219 STLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
+ +I +++ + M+ V PN VT N V+ GY G F+ ++ M +
Sbjct: 221 NIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTM-K 279
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
KPD +T N+ +S + +++ K G+ P T+N LI K D
Sbjct: 280 DKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLD 339
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
K + + M + TYN +I A + E ++M +G++ D T+ I
Sbjct: 340 KAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQI 399
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
NGY G K +S + I V Y ++I K + + E E +K+ ++
Sbjct: 400 NGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGML 459
Query: 459 PDSETFSIMTEAYAKEGMNDKVYALEQE 486
PD F+ + + + G D+ + L +E
Sbjct: 460 PDIIMFNALIDGHCVNGNIDRAFQLLKE 487
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 134/312 (42%), Gaps = 37/312 (11%)
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
T ++ LL+AYC+ DEA LN MK P T ++L+ + + ++ +
Sbjct: 146 TTLVFDLLLSAYCQFRKPDEALECLNLMKE-NEIIPKTETCNSLLSLLLKLNKIKMAWFV 204
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
Y++M + ++ + VT NI++ + G + + + + G +E KP+V T NT+++ +
Sbjct: 205 YEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFI-GHMEVYGVKPNVVTYNTVINGYC 263
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+G+ + + ++ ++ + P+ T+N I K+R ++ S V+
Sbjct: 264 LRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVL------------- 310
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
K +E G+ + T+ LI+G N G K +
Sbjct: 311 --------------CKLLE--------SGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEM 348
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
I +V YN +I A + E E + K M+EK PD T++I Y + G
Sbjct: 349 MNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNA 408
Query: 478 DKVYALEQEKLQ 489
K +L E ++
Sbjct: 409 KKALSLFDEMVE 420
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 62/153 (40%)
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
V E M K+ + T+N +I G K + M G+K + T+ +INGY
Sbjct: 204 VYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYC 263
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
G F + + + YN+ IS K + E V ++ E P++
Sbjct: 264 LRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAV 323
Query: 463 TFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
T++ + + +G DK +A E + + AS
Sbjct: 324 TYNALIDGCCNKGDLDKAFAYRDEMMNRGIVAS 356
>gi|414888268|tpg|DAA64282.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 868
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 186/439 (42%), Gaps = 52/439 (11%)
Query: 90 PIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMK 149
P ++ + LE A+ + + A + + + W ++L++F+ ++ Q + +P E +
Sbjct: 86 PRGSIARCLE-TARHRLTLQDFAAVYREFSRRGDWQRSLRLFKYMQRQSWCRPDEHIHAI 144
Query: 150 LLVLLGKSGQPELARK---VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
++ +LG+ G P L K VF+++ E T YT+L+AAY RN+L +EA L+QMK
Sbjct: 145 VIGVLGRQG-PALLDKCLEVFHDLPAE--SRTALSYTSLIAAYARNALHEEARALLDQMK 201
Query: 207 TLPNCQPDVYTYSTLIKACVDA----MRFELIETLYQDMDER---SVTPNTVTQNIVLGG 259
P TY+T++ AC A + F+++ L+ +M SV P+ T N +L
Sbjct: 202 A-TGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDASPSVRPDLTTYNTLLAA 260
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY---------- 309
+ DQ E +L MLE A PD + I+ FA+ G + +
Sbjct: 261 AAVRSLADQSEMLLHTMLE-AGVSPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTA 319
Query: 310 -------------------------EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
+ + G P T+ +L+ YG++ +D + +
Sbjct: 320 DASAYLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLF 379
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
MR P ++TYN + F D G K + F M G++ D T ++ +
Sbjct: 380 REMRT-AVPPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPDMVTCENVMAACGHG 438
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
GL + ++ + Y ++ A A E + M E P ET+
Sbjct: 439 GLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETY 498
Query: 465 SIMTEAYAKEGMNDKVYAL 483
+ + AYA+ G+ + A+
Sbjct: 499 NALAFAYARGGLFQEAEAI 517
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 110/292 (37%), Gaps = 39/292 (13%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y+ L+ + G A V +M +G PT Y LL Y R D +M+
Sbjct: 324 YLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMR 383
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
T PD TY+ L + D F+ + L+ DM + V P+ VT V+ G G+
Sbjct: 384 T--AVPPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPDMVTCENVMAACGHGGLH 441
Query: 267 DQMERVLS-----GMLESATCK-----------------------------PDVWTMNTI 292
VL GM+ +A P + T N +
Sbjct: 442 GDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNAL 501
Query: 293 LSVFANKGQVDMMERWYEKF-RNFGIDPETRTFNILIGAYGK-KRMYDKMSSVMEYMRKL 350
+A G E + + N GI +F+ LI AY + R+ D + + ME MRK
Sbjct: 502 AFAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYME-MRKS 560
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+F + V+ A+ G + FE++ + +C +++ YA
Sbjct: 561 RFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTMPSVIAYCMMLSLYA 612
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 71/171 (41%), Gaps = 7/171 (4%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P Y L+ LG + E A FN M E G PT E Y AL AY R L EA
Sbjct: 458 PTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAI 517
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
++M Q ++ LI+A R + Y +M + P+ + VL Y
Sbjct: 518 FSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKSRFNPDERSLEGVLNAYC 577
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF 312
AG+ D+ + L+S+ P V +LS++A +RW + +
Sbjct: 578 IAGVIDESKEQFE-ELQSSVTMPSVIAYCMMLSLYARN------DRWTDAY 621
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 149/343 (43%), Gaps = 2/343 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P T+ ++ +L K G+ + A+ + + + P YT+L+ +CRN +D AF
Sbjct: 199 RPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFA 258
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
++M C P+ TYSTLI R E + ++M ++ + P T I L
Sbjct: 259 MFDRMVK-DGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSL 317
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
AG + +L G ++ C P++ T ++S + G+ ++ Y K G+ P
Sbjct: 318 CDAGCSSEAVELL-GKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPT 376
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T T+N LI + ++ ++ ++M ++ TYN +I+ F MGD + F+
Sbjct: 377 TVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFD 436
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M G + T+ LI GY G + + + + + + Y +IS +
Sbjct: 437 KMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGG 496
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
L ++ M E P+ T++ + + Y D AL
Sbjct: 497 KLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALAL 539
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 144/368 (39%), Gaps = 35/368 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L G+ E A + EMV++GIEPT YT L + C EA
Sbjct: 270 PNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVEL 329
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L +MK C P++ T++ LI +FE+ LY M + P TVT N ++
Sbjct: 330 LGKMKK-RGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLC 388
Query: 262 KAGMFDQMERVLSGMLE----------------------------------SATCKPDVW 287
G F+ + ML A P+V
Sbjct: 389 VEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVI 448
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T NT++ + +G ++ R E + G+ P+ T+ LI + + + +S+ M
Sbjct: 449 TYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGM 508
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
+ TY +I+ + ++ F +M G ++T+ +I+G++
Sbjct: 509 MEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSI 568
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ + K + NV Y + I + +++ M++++ P+ T+S +
Sbjct: 569 SEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSL 628
Query: 468 TEAYAKEG 475
+EG
Sbjct: 629 IYGLCQEG 636
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 148/374 (39%), Gaps = 39/374 (10%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY +++ G + A +F++M++ G P Y L+ YC+ ++ A
Sbjct: 410 PSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRL 469
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L MK +PD +TY+ LI + E +L+ M E ++PN VT ++ GY
Sbjct: 470 LEIMKG-NGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYF 528
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
D + M+ES P T N ++S F+ + E + K G+ P
Sbjct: 529 NLAKVDDALALFWKMVESGNL-PSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNV 587
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY--TF 379
T+ I + + M K + TY+++I G A+ E
Sbjct: 588 ITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLL 647
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHK----VIS----------------------S 413
++ G + + T+ L+ G G ++ V+S +
Sbjct: 648 ARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKN 707
Query: 414 VRLASKLQI---------AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
+++ S L I ++S Y A+I A K + + E + +++ M EKH D +
Sbjct: 708 LKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVW 767
Query: 465 SIMTEAYAKEGMND 478
+++ + KEG D
Sbjct: 768 TVLLDGLLKEGETD 781
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 2/148 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L G+ A ++ M ++G++P+ E+Y ALL C+N ++ A
Sbjct: 656 EPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALN 715
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
M TL Q + Y LI A E + ++Q M E+ + V ++L G
Sbjct: 716 IFYSMDTL-GFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGL 774
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWT 288
K G D ++L M ES C + T
Sbjct: 775 LKEGETDLCLKLLHVM-ESRNCTLNFQT 801
>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Vitis vinifera]
Length = 616
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 174/375 (46%), Gaps = 26/375 (6%)
Query: 117 DHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG-I 175
DHVL ++F ++ + P Q E TY +L +L K+ + + A V ++ G I
Sbjct: 170 DHVLSFEFFNWVKA-----QNPNCQTLE-TYSIILHILTKNHKFKSAESVLKGILGSGSI 223
Query: 176 EPTPELYTALLAAY--CRNS--LIDEAFVTLNQMKTLPN-----CQ-------PDVYTYS 219
+ +L+ A+L +Y C +S + D F T QMK L N CQ P V + +
Sbjct: 224 DHPSKLFEAILYSYRICDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCN 283
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
I A + R ++ T Y++M ++PN T N+V+ + K G ++ V M E+
Sbjct: 284 AYISASISLQRGDIALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRM-ET 342
Query: 280 ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
P + + NT+++ + NKG ++ + G+ P+ TFN LI + + +
Sbjct: 343 MGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHE 402
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+ + M+ + TYN +I +S +G+++ ++M G+KAD T+ LI
Sbjct: 403 ANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALIL 462
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA-CIKADDLMEMERVYKRMKEKHCR 458
G G K V+ + + N S ++A+I+ C++ + + +YK M C
Sbjct: 463 GLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQ-LYKSMIRSGCH 521
Query: 459 PDSETFSIMTEAYAK 473
P+ TF ++ + K
Sbjct: 522 PNYHTFKMLISTFCK 536
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 6/206 (2%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P V + N +S + + D+ +Y + + + I P T N+++ A+ K +K V
Sbjct: 277 PRVESCNAYISASISLQRGDIALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEV 336
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ M + F T ++YN +I + + G M G++ D TF LING+
Sbjct: 337 FKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCR 396
Query: 404 AGLFH---KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
G H K+ S ++ + N YN +I+ + + R++ M + D
Sbjct: 397 GGKLHEANKIFSEMKAN---DVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKAD 453
Query: 461 SETFSIMTEAYAKEGMNDKVYALEQE 486
T++ + EG K L +E
Sbjct: 454 ILTYNALILGLCMEGRTKKAAYLVKE 479
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L++ L G+ + A + E+ E + P ++AL+ C + AF M
Sbjct: 456 TYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSM 515
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG 264
C P+ +T+ LI F+ + ++M ERS+ P++ T + + G +G
Sbjct: 516 -IRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSG 573
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 162/346 (46%), Gaps = 2/346 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY ++ L K G +LA + N+M + +EP +Y ++ C+ +D+A
Sbjct: 218 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 277
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M+T +P+V TYS+LI + R+ L DM ER + P+ T + ++ +
Sbjct: 278 LFKEMET-KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 336
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + E++ M++ + P + T +++++ F ++D ++ +E + P+
Sbjct: 337 VKEGKLVEAEKLYDEMVKRSI-DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+N LI + K + ++ V M + + TYN +I+ GD + F+
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M ++G+ + T+ L++G G K + + ++ + YN +I KA
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ + ++ + K +PD ++ M + ++G ++ AL +E
Sbjct: 516 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 561
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 150/343 (43%), Gaps = 8/343 (2%)
Query: 136 EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI 195
EQ +P Y ++ L K + A +F EM +GI P Y++L++ C
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI 255
+A L+ M PDV+T+S LI A V + E LY +M +RS+ P+ VT +
Sbjct: 308 SDASRLLSDMIE-RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 366
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
++ G+ D+ +++ M+ S C PDV T NT++ F +V+ + +
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMV-SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G+ T T+NILI + D + + M P TYN +++ G +
Sbjct: 426 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAV 432
FE + M+ T+ +I G AG KV L L + +V YN +
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAG---KVEDGWDLFCNLSLKGVKPDVVAYNTM 542
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
IS + E + ++K MKE P+S ++ + A ++G
Sbjct: 543 ISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 585
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 154/360 (42%), Gaps = 16/360 (4%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
A+ +F EM+K +PF P + KLL + K + ++ + +M GI Y+
Sbjct: 64 DAVALFGEMVKSRPF--PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ +CR S + A L +M L +P++ T S+L+ + R L M
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKL-GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
PNTVT N ++ G + ++ M+ C+PD+ T +++ +G D+
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG-CQPDLVTYGVVVNGLCKRGDTDL 239
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
K ++P +N +I K + D ++ + M TY+++I
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL---Q 421
+ G M + D TF LI+ + G K++ + +L ++
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG---KLVEAEKLYDEMVKRS 356
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK-----EGM 476
I ++ Y+++I+ D L E +++++ M KHC PD T++ + + + K EGM
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 416
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 149/342 (43%), Gaps = 39/342 (11%)
Query: 93 NLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLV 152
NL K++E K + V T + S +W A ++ + E+ P T+ L+
Sbjct: 277 NLFKEMETKG-IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI-NPDVFTFSALID 334
Query: 153 LLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQ 212
K G+ A K+++EMV+ I+P+ Y++L+ +C + +DEA M + +C
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS-KHCF 393
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
PDV TY+TLIK R E ++++M +R + NTVT NI++ G +AG D + +
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDM---------------------------- 304
M+ P++ T NT+L G+++
Sbjct: 454 FKEMVSDGV-PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512
Query: 305 ----MERWYEKFRNF---GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+E ++ F N G+ P+ +N +I + +K ++ ++ + M++ S
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
YN +I A GD + ++M + G D T + N
Sbjct: 573 CYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 122/291 (41%), Gaps = 10/291 (3%)
Query: 191 RNSL----IDEAFVTLNQM-KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
RN L +D+A +M K+ P P + +S L+ A +F+++ +L + M
Sbjct: 54 RNGLSELKLDDAVALFGEMVKSRP--FPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG 111
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ N T +I++ + + VL M++ +P++ T++++L+ + + ++
Sbjct: 112 IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGY-EPNIVTLSSLLNGYCHSKRISEA 170
Query: 306 ERWYEKFRNFGIDPETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
++ G P T TFN LI G + + + M+ + + K P TY V+
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQP-DLVTYGVVVN 229
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
GD +M ++ + +I+G ++ + I
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
NV Y+++IS + R+ M E+ PD TFS + +A+ KEG
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 69/175 (39%), Gaps = 4/175 (2%)
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P F+ L+ A K +D + S+ E M+ L P TY+ +I F
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
+M G + + T L+NGY ++ + ++ V N +N +I
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL----EQEKLQ 489
+ E + RM K C+PD T+ ++ K G D + L EQ KL+
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 253
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 149/343 (43%), Gaps = 2/343 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P T+ ++ +L K G+ + A+ + + + P YT+L+ +CRN +D AF
Sbjct: 199 RPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFA 258
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
++M C P+ TYSTLI R E + ++M ++ + P T I L
Sbjct: 259 MFDRMVK-DGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSL 317
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
AG + +L G ++ C P++ T ++S + G+ ++ Y K G+ P
Sbjct: 318 CDAGCSSEAVELL-GKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPT 376
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T T+N LI + ++ ++ ++M ++ TYN +I+ F MGD + F+
Sbjct: 377 TVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFD 436
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M G + T+ LI GY G + + + + + + Y +IS +
Sbjct: 437 KMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGG 496
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
L ++ M E P+ T++ + + Y D AL
Sbjct: 497 KLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALAL 539
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 144/368 (39%), Gaps = 35/368 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L G+ E A + EMV++GIEPT YT L + C EA
Sbjct: 270 PNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVEL 329
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L +MK C P++ T++ LI +FE+ LY M + P TVT N ++
Sbjct: 330 LGKMKK-RGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLC 388
Query: 262 KAGMFDQMERVLSGMLE----------------------------------SATCKPDVW 287
G F+ + ML A P+V
Sbjct: 389 VEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVI 448
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T NT++ + +G ++ R E + G+ P+ T+ LI + + + +S+ M
Sbjct: 449 TYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGM 508
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
+ TY +I+ + ++ F +M G ++T+ +I+G++
Sbjct: 509 MEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSI 568
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ + K + NV Y + I + +++ M++++ P+ T+S +
Sbjct: 569 SEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSL 628
Query: 468 TEAYAKEG 475
+EG
Sbjct: 629 IYGLCQEG 636
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 148/374 (39%), Gaps = 39/374 (10%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY +++ G + A +F++M++ G P Y L+ YC+ ++ A
Sbjct: 410 PSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRL 469
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L MK +PD +TY+ LI + E +L+ M E ++PN VT ++ GY
Sbjct: 470 LEIMKG-NGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYF 528
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
D + M+ES P T N ++S F+ + E + K G+ P
Sbjct: 529 NLAKVDDALALFWKMVESGNL-PSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNV 587
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY--TF 379
T+ I + + M K + TY+++I G A+ E
Sbjct: 588 ITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLL 647
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHK----VIS----------------------S 413
++ G + + T+ L+ G G ++ V+S +
Sbjct: 648 ARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKN 707
Query: 414 VRLASKLQI---------AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
+++ S L I ++S Y A+I A K + + E + +++ M EKH D +
Sbjct: 708 LKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAW 767
Query: 465 SIMTEAYAKEGMND 478
+++ + KEG D
Sbjct: 768 TVLLDGLLKEGETD 781
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 2/148 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L G+ A ++ M ++G++P+ E+Y ALL C+N ++ A
Sbjct: 656 EPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALN 715
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
M TL Q + Y LI A E + ++Q M E+ + V ++L G
Sbjct: 716 IFYSMDTL-GFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGL 774
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWT 288
K G D ++L M ES C + T
Sbjct: 775 LKEGETDLCLKLLHVM-ESRNCTLNFQT 801
>gi|334182677|ref|NP_001185030.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191659|gb|AEE29780.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 886
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 153/332 (46%), Gaps = 4/332 (1%)
Query: 116 SDHVLKK--QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE 173
++ VLK+ + AL F LK QP ++ TY ++ LG++ Q K+ +EMV +
Sbjct: 334 ANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRD 393
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
G +P Y L+ +Y R + ++EA NQM+ C+PD TY TLI A ++
Sbjct: 394 GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQE-AGCKPDRVTYCTLIDIHAKAGFLDI 452
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
+YQ M ++P+T T ++++ GKAG ++ M++ C P++ T N ++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG-CTPNLVTYNIMM 511
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
+ A + Y +N G +P+ T++I++ G ++ +V M++ +
Sbjct: 512 DLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
Y +++ + G+ + ++ M G++ + T L++ + +
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYEL 631
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEM 445
++ L + ++ Y ++S C ++M
Sbjct: 632 LQNMLALGLRPSLQTYTLLLSCCTDGRSKLDM 663
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 133/320 (41%), Gaps = 5/320 (1%)
Query: 72 EYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWF--QALQ 129
++ G + T++ G + + K L+ + NTV H + + +A+
Sbjct: 361 KHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
VF ++E +P TY L+ + K+G ++A ++ M G+ P Y+ ++
Sbjct: 421 VFNQMQEAGC-KPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCL 479
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
+ + A +M C P++ TY+ ++ A ++ LY+DM P+
Sbjct: 480 GKAGHLPAAHKLFCEMVD-QGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
VT +IV+ G G ++ E V + M + PD ++ ++ G V+ +WY
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEM-QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
+ + G+ P T N L+ + + + +++ M L + TY ++ +D
Sbjct: 598 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 657
Query: 370 GDAKHMEYTFEQMHAEGMKA 389
M + + M + G A
Sbjct: 658 RSKLDMGFCGQLMASTGHPA 677
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
L++ + D + N +L + G W + R G + T+ ++G G+ +
Sbjct: 322 LQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLK--RQPGFKHDGHTYTTMVGNLGRAKQ 379
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
+ ++ +++ M + + TYN +I ++ F QM G K D T+C
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
LI+ +A AG + + ++ + Y+ +I+ KA L +++ M ++
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 457 CRPDSETFSIMTEAYAK 473
C P+ T++IM + +AK
Sbjct: 500 CTPNLVTYNIMMDLHAK 516
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 87/210 (41%), Gaps = 6/210 (2%)
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
K D T T++ Q + + ++ G P T T+N LI +YG+ ++ +
Sbjct: 361 KHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
V M++ TY +I+ + G +++M A G+ DT T+ +IN
Sbjct: 421 VFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLG 480
Query: 403 NAGLF---HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
AG HK+ + N+ YN ++ KA + ++Y+ M+ P
Sbjct: 481 KAGHLPAAHKLFCEM---VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 460 DSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
D T+SI+ E G ++ A+ E Q
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQ 567
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
E ++ L + N V++ +D G+A Y ++ G K D T+ ++ A
Sbjct: 320 EALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQ--PGFKHDGHTYTTMVGNLGRA 377
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
F + + + N YN +I + +A+ L E V+ +M+E C+PD T+
Sbjct: 378 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTY 437
Query: 465 SIMTEAYAKEGMND 478
+ + +AK G D
Sbjct: 438 CTLIDIHAKAGFLD 451
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 171/361 (47%), Gaps = 10/361 (2%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
HV + ++ +A+++ +++ ++ QP Y +++ L KS + E A+ EM+E G++P
Sbjct: 491 HVQEGRFQEAVRILKVMDKKGV-QPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKP 549
Query: 178 TPELYTALLAAYCRNS---LIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELI 234
Y AL+ YC++ + D F + PN DV + + C + E
Sbjct: 550 NVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPN---DVVCTALIDGYCKEGSTTE-A 605
Query: 235 ETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILS 294
++++ M RSV P+ T + ++ G + G +LS LE PDV+T N+I+S
Sbjct: 606 TSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLV-PDVFTYNSIIS 664
Query: 295 VFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 354
F +G + + +E GI P T+N LI K ++ + + +
Sbjct: 665 GFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAH 724
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
+ TY +I+ + G+ F++M +G+ D+ + LI+G G K + S+
Sbjct: 725 NAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKAL-SL 783
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
L S + + S NA++ K+ ++E ++ + M +KH +PD T++I+ + + K
Sbjct: 784 FLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKT 843
Query: 475 G 475
G
Sbjct: 844 G 844
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 148/330 (44%), Gaps = 2/330 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ ++G + +++ EM E+G P+ Y ++ CR +DEAF L ++
Sbjct: 238 TYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAF-ELKKL 296
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
DV+TYS LI R + + ++M + + P V ++ G+ + G
Sbjct: 297 MDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGD 356
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+ RV ML K +++T N ++ G ++ + + GI P+T+T+N
Sbjct: 357 SGEAFRVKEEMLARGV-KLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYN 415
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
+I Y K++ ++ ++ M+K T+ T +I G + FE M +
Sbjct: 416 NMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSL 475
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G+K + + LI G+ G F + + +++ K + +V YN+VI K+ + E
Sbjct: 476 GVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEA 535
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ M E+ +P+ T+ + Y K G
Sbjct: 536 KDYLVEMIERGLKPNVYTYGALIHGYCKSG 565
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 165/396 (41%), Gaps = 40/396 (10%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ KSG+ ++A + F EM+ GI P + TAL+ YC+ EA
Sbjct: 548 KPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATS 607
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
M + PDV TYS LI + + + L + E+ + P+ T N ++ G+
Sbjct: 608 IFRCMLG-RSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGF 666
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + ++ M + P++ T N +++ G+++ ++ G+
Sbjct: 667 CKQGGIGKAFQLHEYMCQKGI-SPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHN 725
Query: 321 TRTFNILIGAYGKK-------RMYDKM------------SSVMEYMRK------------ 349
T+ +I Y K R++D+M S++++ RK
Sbjct: 726 AVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFL 785
Query: 350 --LQFPWTS-STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
+Q + S S+ N +++ F G E M + +K D T+ LI+ + G
Sbjct: 786 ESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGF 845
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ K + N Y A++S A EM ++ M K PD T+S+
Sbjct: 846 LKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSV 905
Query: 467 MTEAYAKEGMNDKVYALEQEKLQMLLEASGHWQQNI 502
M +A+ KEG + K L + +L+ G+ +N+
Sbjct: 906 MIDAHLKEGDHVKTLKLVDD----MLKKGGNVSKNV 937
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/402 (21%), Positives = 171/402 (42%), Gaps = 16/402 (3%)
Query: 94 LKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFE--MLKEQPF---YQPKEGTYM 148
LKK +++K VA+ F+ +L + + + E ++ E+ F +P Y
Sbjct: 293 LKKLMDKKG-------LVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYT 345
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
L+ + G A +V EM+ G++ Y AL+ C+ +++A LN+M +
Sbjct: 346 ALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEM-IM 404
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
+PD TY+ +I+ + ++ L +M + ++ P T +++ G + G +
Sbjct: 405 VGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIED 464
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN-IL 327
RV M+ S KP+ T++ +G+ R + G+ P+ +N ++
Sbjct: 465 ASRVFEIMV-SLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVI 523
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
IG ++M + ++E + + P TY +I + G+ + + F++M G+
Sbjct: 524 IGLCKSRKMEEAKDYLVEMIERGLKP-NVYTYGALIHGYCKSGEMQVADRYFKEMLGCGI 582
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
+ LI+GY G + S R + +V Y+A+I ++ L
Sbjct: 583 APNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAME 642
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ EK PD T++ + + K+G K + L + Q
Sbjct: 643 LLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQ 684
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 118/266 (44%), Gaps = 1/266 (0%)
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
N DVYTY+ LI A A + + L +M+E+ +P+ VT N+V+GG +AG D+
Sbjct: 231 NVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEA 290
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
L +++ DV+T + ++ F + + + E+ + G+ P + LI
Sbjct: 291 FE-LKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALID 349
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+ ++ + V E M TYN +++ GD + + +M G+K
Sbjct: 350 GFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKP 409
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
DT+T+ +I GY +V + K + +I+ + + + RV+
Sbjct: 410 DTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVF 469
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEG 475
+ M +P++ ++ + + + +EG
Sbjct: 470 EIMVSLGVKPNAVIYTTLIKGHVQEG 495
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 134/350 (38%), Gaps = 46/350 (13%)
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
G + ++ L C + L A +NQM + + +LIK+C + F+L
Sbjct: 96 GFSQKLQSFSILALILCNSRLFSRADSVVNQMIMMSSGGYS-EILDSLIKSCKE---FDL 151
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME----------------------- 270
+ + V +++ GY K G+FD+
Sbjct: 152 NNV--NGNENSNNNDRGVVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLS 209
Query: 271 ------------RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
R +GMLE A DV+T +++ G +R + G
Sbjct: 210 DLLKANKLELFWRFYNGMLE-ANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCS 268
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P T+N++IG + D+ + + M K TY+ +I+ F +
Sbjct: 269 PSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLM 328
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKV--ISSVRLASKLQIAENVSFYNAVISAC 436
E+M ++G+K + LI+G+ G + + LA +++ N+ YNA++
Sbjct: 329 LEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKL--NLFTYNALVKGV 386
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
K D+ + + + M +PD++T++ M E Y KE +V L E
Sbjct: 387 CKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSE 436
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 118/299 (39%), Gaps = 9/299 (3%)
Query: 36 VPNFNLIHCSVTSTNKHTSFSSESAVAAKKRLWKEGEYPGVSETS------IPGYRSKRT 89
+P L H +VT + ++ RL+ E GV S I G R +
Sbjct: 717 IPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGN 776
Query: 90 PIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMK 149
K L LE K A +++ + +A Q+ E + ++ +P TY
Sbjct: 777 TEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHV-KPDHVTYTI 835
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
L+ K+G + A + F +M + + P YTALL+ Y E F ++M
Sbjct: 836 LIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEM-IAK 894
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+ +PD T+S +I A + L DM ++ + ++++ + ++
Sbjct: 895 DIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEV 954
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
+VL +E + T +T++ F G++D R + F P++ N LI
Sbjct: 955 LKVLE-KIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLI 1012
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 58/131 (44%)
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
TY ++I A G+AK + +M +G T+ +I G AG + +L
Sbjct: 238 TYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLM 297
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
K + +V Y+ +I K E + + + M K +P ++ + + + ++G +
Sbjct: 298 DKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDS 357
Query: 478 DKVYALEQEKL 488
+ + +++E L
Sbjct: 358 GEAFRVKEEML 368
>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 613
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 147/321 (45%), Gaps = 2/321 (0%)
Query: 145 GTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQ 204
TY L+ G SG+ A KVF +M+E G+E ++T++++ C+ + AF ++
Sbjct: 286 ATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDE 345
Query: 205 MKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG 264
+ + +TY LI ++ + + E L +M + + N V N ++ GY K G
Sbjct: 346 LNE-RGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKG 404
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
M D+ R + ++E + D++T NTI + + +RW G+DP +F
Sbjct: 405 MIDEALR-MQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSF 463
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
I+I + K+ + V + M+K TYN +I+ +S G K ++M +
Sbjct: 464 TIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMES 523
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
GM +D T+ L++G G + ++ + + +A ++ Y A+IS K E
Sbjct: 524 IGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEE 583
Query: 445 MERVYKRMKEKHCRPDSETFS 465
R+Y M PD ++
Sbjct: 584 AFRLYDEMMAAGLTPDDRVYT 604
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 151/371 (40%), Gaps = 72/371 (19%)
Query: 151 LVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPN 210
L+ L +S Q ++ F +MVE ++ T T ++ C+ ++ A + +M T
Sbjct: 187 LLALKRSDQMVMSLGFFKKMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEM-TGKG 245
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
+P+V TY+TL+ A + M FE + + + M+ V N T +++ YG +G + E
Sbjct: 246 IKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAE 305
Query: 271 RVLSGMLESATCKPDVWTMNTILS----------VFA----------------------- 297
+V MLE + D+ +I+S FA
Sbjct: 306 KVFEKMLERGV-EADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHG 364
Query: 298 --NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
N GQ+D E + ++ G+D FN LI Y KK M D+ + + M K F
Sbjct: 365 TCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFEND 424
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
TYN + + + + M +G+ + +F +I+ + G
Sbjct: 425 IFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEG---------- 474
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+L+E ERV++ MK+K +P+ T++ + + Y+K+G
Sbjct: 475 -------------------------NLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKG 509
Query: 476 MNDKVYALEQE 486
+ Y L+ E
Sbjct: 510 KLKEAYRLKDE 520
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 162/384 (42%), Gaps = 13/384 (3%)
Query: 98 LERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPK--EGTYMKLLVLLG 155
+ R KA+ +V + + + + K ++ F L + F++PK E L +
Sbjct: 98 ISRLFKARKFV-VMKNVLTCYAMDKNLRCSVSDFVSLIDNRFHEPKFVEKLCDMLFRVYV 156
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
+ E KVF+ MV G++ L A R+ D+ ++L K + + DV
Sbjct: 157 DNSMFEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRS---DQMVMSLGFFKKMVEFKVDV 213
Query: 216 YTYSTLIKACVDAM----RFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
YS I +D + R E + L +M + + PN VT N ++ Y K F+ +
Sbjct: 214 TVYSMTI--VIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNE 271
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+L ++E + T ++ + + G++ E+ +EK G++ + F +I
Sbjct: 272 MLR-LMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQ 330
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
K + ++ + + + + TY +I + G E +M ++G+ +
Sbjct: 331 CKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNL 390
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
F LINGY G+ + + + K ++ YN + K + E +R
Sbjct: 391 VIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFT 450
Query: 452 MKEKHCRPDSETFSIMTEAYAKEG 475
M EK P++ +F+IM + + KEG
Sbjct: 451 MVEKGVDPNAVSFTIMIDIHCKEG 474
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 92/211 (43%), Gaps = 5/211 (2%)
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
V++M ++ KG+V+ + + GI P T+N L+ AY K ++ ++ ++
Sbjct: 215 VYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLR 274
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
M + + ++TY +IE + G E FE+M G++AD F +I+ G
Sbjct: 275 LMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLG 334
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ + ++ + N Y A+I + L E + M+ + + F+
Sbjct: 335 NMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFN 394
Query: 466 IMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
+ Y K+GM D E ++Q ++E G
Sbjct: 395 TLINGYCKKGMID-----EALRMQDVMEKKG 420
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 90/211 (42%), Gaps = 19/211 (9%)
Query: 303 DMMERWY-------EKFRNF------GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
DM+ R Y E F+ F G+ + R+ + + A + D+M + + +K
Sbjct: 149 DMLFRVYVDNSMFEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRS---DQMVMSLGFFKK 205
Query: 350 L-QFPWTSSTYNN--VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
+ +F + Y+ VI+ G + + +M +G+K + T+ L+N Y
Sbjct: 206 MVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMD 265
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
F V +RL ++ N + Y +I + + E E+V+++M E+ D F+
Sbjct: 266 FEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTS 325
Query: 467 MTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
+ K G + +AL E + L A+ H
Sbjct: 326 IISWQCKLGNMKRAFALFDELNERGLVANAH 356
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 153/338 (45%), Gaps = 6/338 (1%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
++P Y L+ + K G+ E+A K+ EM++ G++P Y+ ++ + C + ++ AF
Sbjct: 240 FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAF 299
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL--YQDMDERSVTPNTVTQNIVL 257
QM L C +++T++ LIK C MR +L E L ++ M + PN V N ++
Sbjct: 300 ALFAQM-FLRGCDANIHTFTPLIKGCF--MRGKLYEALDLWKLMIQDGCEPNVVAYNTLI 356
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
G G ++ +V M S C P+V T + ++ FA G + + + + G
Sbjct: 357 HGLCSNGSLEEALQVCDQMQRSG-CLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGC 415
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P T+ ++ K M+D+ +S++E M + T+N I+ G +
Sbjct: 416 RPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMK 475
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
E+M G + T+ L++ + + + + N+ YN V+
Sbjct: 476 LLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFS 535
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+A + E +++ + + PDS T++ M AY K+G
Sbjct: 536 RAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQG 573
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 157/395 (39%), Gaps = 42/395 (10%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
L F + +Q TY ++ LG+ + ++ + + +M +GI +L+ ++
Sbjct: 57 VLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICII 116
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
Y R ++A ++ C+P V Y+ L+ A + +F++I LY +M + +
Sbjct: 117 NGYKRVGSAEQALKMFYRIGEF-GCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGL 175
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PN T NI+L K D ++ M + C PD T T++S G++D
Sbjct: 176 IPNVFTYNILLKALCKNDRVDAAHKLFVEM-SNKGCPPDAVTYTTMVSSLCKAGKIDDAR 234
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+F+ P +N LI K+ + ++ M +Y+ +I +
Sbjct: 235 ELAGRFK-----PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSL 289
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG--------------------- 405
G+ + F QM G A+ TF LI G G
Sbjct: 290 CVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNV 349
Query: 406 -----LFHKVISSVRLASKLQIAE---------NVSFYNAVISACIKADDLMEMERVYKR 451
L H + S+ L LQ+ + NV+ Y+ +I K+ DL+ + R
Sbjct: 350 VAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNR 409
Query: 452 MKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
M CRP+ T++ M + K M D+ +L ++
Sbjct: 410 MISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEK 444
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 157/371 (42%), Gaps = 9/371 (2%)
Query: 117 DHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIE 176
D +L + FQ + ++ P TY LL L K+ + + A K+F EM +G
Sbjct: 152 DALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCP 211
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
P YT ++++ C+ ID+A + K P V Y+ LI R E+
Sbjct: 212 PDAVTYTTMVSSLCKAGKIDDARELAGRFK------PSVPVYNALIDGMCKEGRIEVAIK 265
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
L +M + V PN V+ + ++ +G + + + M C ++ T ++
Sbjct: 266 LLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRG-CDANIHTFTPLIKGC 324
Query: 297 ANKGQV-DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
+G++ + ++ W ++ G +P +N LI ++ V + M++
Sbjct: 325 FMRGKLYEALDLWKLMIQD-GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPN 383
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
+TY+ +I+ F+ GD T+ +M + G + + T+ C+++ +F + S V
Sbjct: 384 VTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVE 443
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ N +N I + ++ +RM+ C P+ T++ + +A +
Sbjct: 444 KMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMN 503
Query: 476 MNDKVYALEQE 486
++ + L QE
Sbjct: 504 KYEEAFGLFQE 514
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 124/280 (44%), Gaps = 41/280 (14%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+ALQV + ++ P TY L+ KSG A + +N M+ G P YT +
Sbjct: 367 EALQVCDQMQRSGCL-PNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCM 425
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE----LIE------ 235
+ C+NS+ D+A + +M TL C P+ T++T IK R E L+E
Sbjct: 426 VDVLCKNSMFDQANSLVEKM-TLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHG 484
Query: 236 -------------------------TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
L+Q+++ R++ PN VT N VL G+ +AGM +
Sbjct: 485 CLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEAL 544
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG-IDPETRTFNILI- 328
++ L T PD T NT++ + +G+V + + E+ + P+ T+ LI
Sbjct: 545 QLFGKALVRGT-APDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIW 603
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD 368
GA + + M+ + + + + P +T+N ++ F D
Sbjct: 604 GACNWMNIEEAMAFLDKAINQGICP-NFATWNALVRCFFD 642
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Query: 340 MSSVMEYMRKLQ----FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
+SSV+ + + F T+STY +IE + ++Y +QM +G+ F
Sbjct: 54 LSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFI 113
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
C+INGY G + + + V YN ++ A + + + +Y MK+
Sbjct: 114 CIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKD 173
Query: 456 HCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
P+ T++I+ +A K ND+V A + ++M
Sbjct: 174 GLIPNVFTYNILLKALCK---NDRVDAAHKLFVEM 205
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 96/253 (37%), Gaps = 29/253 (11%)
Query: 37 PNFNLIHCSVTSTNKHTSFSSESAVAAKKRLWKEGEYPGVSETSIPGYRSKRTPIKNL-- 94
PN C V K++ F +++ K L E P + T IK L
Sbjct: 417 PNVVTYTCMVDVLCKNSMFDQANSLVEKMTL----------EGCTPNTMTFNTFIKGLCG 466
Query: 95 -------KKKLERKAKAKAWVN-TVAETFSDHVLK-KQWFQALQVFEMLKEQPFYQPKEG 145
K LER N T D + + ++ +A +F+ ++ + QP
Sbjct: 467 NGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNL-QPNLV 525
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY +L ++G A ++F + + G P Y ++ AYC+ + A + ++
Sbjct: 526 TYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERV 585
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIV-------LG 258
++ PD+ TY++LI + M E + + PN T N + LG
Sbjct: 586 SSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLG 645
Query: 259 GYGKAGMFDQMER 271
G + D + R
Sbjct: 646 HMGPIHILDDILR 658
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 155/379 (40%), Gaps = 38/379 (10%)
Query: 133 MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRN 192
++ E P +P TY L+ L G+ A V +EM+ P YT LL A C+
Sbjct: 148 LVAEMPV-EPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKR 206
Query: 193 SLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVT 252
S +A L++M+ C PD+ TY+ ++ R + +++ PNTV+
Sbjct: 207 SGYKQAMKLLDEMRD-KGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVS 265
Query: 253 QNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF 312
NIVL G A ++ E ++ M + C P+V T N ++S KG V+ E+
Sbjct: 266 YNIVLKGLCTAERWEDAEELMGEMGQKG-CPPNVVTFNMLISFLCRKGLVEPALEVLEQI 324
Query: 313 RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM-RKLQFPWTSS-------------- 357
+G P + ++N L+ A+ K++ DK + ++ M + +P S
Sbjct: 325 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEV 384
Query: 358 --------------------TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
+YN VI+ + G K +M ++G++ D T+ +
Sbjct: 385 DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 444
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
G I + + I N YNA+I K + ++ M C
Sbjct: 445 AAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGC 504
Query: 458 RPDSETFSIMTEAYAKEGM 476
P+ T++I+ E A EG+
Sbjct: 505 MPNESTYTILIEGLAYEGL 523
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 148/346 (42%), Gaps = 10/346 (2%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P GT L+ L SG+ AR+V P Y A++A YC +D A
Sbjct: 93 RPDAGTCAALIKKLSASGRTAEARRVL-----AACGPDVMAYNAMVAGYCGAGQLDAARR 147
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ +M +PD YTY+TLI+ R + +M R P+ VT I+L
Sbjct: 148 LVAEMPV----EPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEAT 203
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K + Q ++L M + C PD+ T N +++ +G+VD + + ++G +P
Sbjct: 204 CKRSGYKQAMKLLDEMRDKG-CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPN 262
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T ++NI++ ++ +M M + P T+N +I G + E
Sbjct: 263 TVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLE 322
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
Q+ G ++ ++ L++ + K ++ + L ++ YN +++A ++
Sbjct: 323 QIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSG 382
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
++ + ++K+K C P +++ + + K G + L E
Sbjct: 383 EVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNE 428
>gi|15221893|ref|NP_173324.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42571539|ref|NP_973860.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75151479|sp|Q8GYP6.1|PPR49_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18900
gi|26450017|dbj|BAC42129.1| unknown protein [Arabidopsis thaliana]
gi|28827402|gb|AAO50545.1| unknown protein [Arabidopsis thaliana]
gi|332191657|gb|AEE29778.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191658|gb|AEE29779.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 153/332 (46%), Gaps = 4/332 (1%)
Query: 116 SDHVLKK--QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE 173
++ VLK+ + AL F LK QP ++ TY ++ LG++ Q K+ +EMV +
Sbjct: 334 ANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRD 393
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
G +P Y L+ +Y R + ++EA NQM+ C+PD TY TLI A ++
Sbjct: 394 GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQE-AGCKPDRVTYCTLIDIHAKAGFLDI 452
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
+YQ M ++P+T T ++++ GKAG ++ M++ C P++ T N ++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG-CTPNLVTYNIMM 511
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
+ A + Y +N G +P+ T++I++ G ++ +V M++ +
Sbjct: 512 DLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
Y +++ + G+ + ++ M G++ + T L++ + +
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYEL 631
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEM 445
++ L + ++ Y ++S C ++M
Sbjct: 632 LQNMLALGLRPSLQTYTLLLSCCTDGRSKLDM 663
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 133/320 (41%), Gaps = 5/320 (1%)
Query: 72 EYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWF--QALQ 129
++ G + T++ G + + K L+ + NTV H + + +A+
Sbjct: 361 KHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
VF ++E +P TY L+ + K+G ++A ++ M G+ P Y+ ++
Sbjct: 421 VFNQMQEAGC-KPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCL 479
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
+ + A +M C P++ TY+ ++ A ++ LY+DM P+
Sbjct: 480 GKAGHLPAAHKLFCEMVD-QGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
VT +IV+ G G ++ E V + M + PD ++ ++ G V+ +WY
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEM-QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
+ + G+ P T N L+ + + + +++ M L + TY ++ +D
Sbjct: 598 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 657
Query: 370 GDAKHMEYTFEQMHAEGMKA 389
M + + M + G A
Sbjct: 658 RSKLDMGFCGQLMASTGHPA 677
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
L++ + D + N +L + G W + R G + T+ ++G G+ +
Sbjct: 322 LQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLK--RQPGFKHDGHTYTTMVGNLGRAKQ 379
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
+ ++ +++ M + + TYN +I ++ F QM G K D T+C
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
LI+ +A AG + + ++ + Y+ +I+ KA L +++ M ++
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 457 CRPDSETFSIMTEAYAK 473
C P+ T++IM + +AK
Sbjct: 500 CTPNLVTYNIMMDLHAK 516
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 87/210 (41%), Gaps = 6/210 (2%)
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
K D T T++ Q + + ++ G P T T+N LI +YG+ ++ +
Sbjct: 361 KHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
V M++ TY +I+ + G +++M A G+ DT T+ +IN
Sbjct: 421 VFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLG 480
Query: 403 NAGLF---HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
AG HK+ + N+ YN ++ KA + ++Y+ M+ P
Sbjct: 481 KAGHLPAAHKLFCEM---VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 460 DSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
D T+SI+ E G ++ A+ E Q
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQ 567
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
E ++ L + N V++ +D G+A Y ++ G K D T+ ++ A
Sbjct: 320 EALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQ--PGFKHDGHTYTTMVGNLGRA 377
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
F + + + N YN +I + +A+ L E V+ +M+E C+PD T+
Sbjct: 378 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTY 437
Query: 465 SIMTEAYAKEGMND 478
+ + +AK G D
Sbjct: 438 CTLIDIHAKAGFLD 451
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 159/345 (46%), Gaps = 20/345 (5%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
++P Y L+ + K G+ E+A K+ EM++ G++P Y+ ++ + C + ++ AF
Sbjct: 240 FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAF 299
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL--YQDMDERSVTPNTVTQNIVL 257
QM L C +++T++ LIK C MR +L E L ++ M + PN V N ++
Sbjct: 300 ALFAQM-FLRGCDANIHTFTPLIKGCF--MRGKLYEALDLWKLMIQDGCEPNVVAYNTLI 356
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
G G ++ +V M S C P+V T + ++ FA G + + + + G
Sbjct: 357 HGLCSNGSLEEALQVCDQMQRSG-CLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGC 415
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P T+ ++ K M+D+ +S++E M + T+N I+ G +
Sbjct: 416 RPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMK 475
Query: 378 TFEQMHAEGMKADTKTFCCLI------NGYANA-GLFHKVISSVRLASKLQIAENVSFYN 430
E+M G + T+ L+ N Y A GLF ++ A LQ N+ YN
Sbjct: 476 LLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEI-----EARNLQ--PNLVTYN 528
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
V+ +A + E +++ + + PDS T++ M AY K+G
Sbjct: 529 TVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQG 573
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 147/349 (42%), Gaps = 7/349 (2%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
L F + +Q TY ++ LG+ + ++ + + +M +GI +L+ ++
Sbjct: 57 VLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICII 116
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
Y R ++A ++ C+P V Y+ L+ A + +F++I LY +M + +
Sbjct: 117 NGYKRVGSAEQALKMFYRIGEF-GCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGL 175
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PN T NI+L K D ++ M + C PD T T++S G++D
Sbjct: 176 IPNVFTYNILLKALCKNDRVDAAHKLFVEM-SNKGCPPDAVTYTTMVSSLCKAGKIDDAR 234
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+F+ P +N LI K+ + ++ M +Y+ +I +
Sbjct: 235 ELAGRFK-----PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSL 289
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G+ + F QM G A+ TF LI G G ++ + +L + NV
Sbjct: 290 CVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNV 349
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
YN +I L E +V +M+ C P+ T+SI+ + +AK G
Sbjct: 350 VAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSG 398
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 111/266 (41%), Gaps = 13/266 (4%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A ++ M+++G EP Y L+ C N ++EA +QM+ C P+V TYS LI
Sbjct: 333 ALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQR-SGCLPNVTTYSILI 391
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM-LESAT 281
+ + M PN VT ++ K MFDQ ++ M LE
Sbjct: 392 DGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEG-- 449
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
C P+ T NT + G+V+ + E+ + G P T+N L+ A + Y++
Sbjct: 450 CTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAF 509
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+ + + TYN V+ FS G F + G D+ T+ +I+ Y
Sbjct: 510 GLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAY 569
Query: 402 ANAGLFHKVISSVRLASKLQIAENVS 427
G V++A+ Q+ E VS
Sbjct: 570 CKQG-------KVKIAA--QLVERVS 586
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 157/371 (42%), Gaps = 9/371 (2%)
Query: 117 DHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIE 176
D +L + FQ + ++ P TY LL L K+ + + A K+F EM +G
Sbjct: 152 DALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCP 211
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
P YT ++++ C+ ID+A + K P V Y+ LI R E+
Sbjct: 212 PDAVTYTTMVSSLCKAGKIDDARELAGRFK------PSVPVYNALIDGMCKEGRIEVAIK 265
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
L +M + V PN V+ + ++ +G + + + M C ++ T ++
Sbjct: 266 LLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRG-CDANIHTFTPLIKGC 324
Query: 297 ANKGQV-DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
+G++ + ++ W ++ G +P +N LI ++ V + M++
Sbjct: 325 FMRGKLYEALDLWKLMIQD-GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPN 383
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
+TY+ +I+ F+ GD T+ +M + G + + T+ C+++ +F + S V
Sbjct: 384 VTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVE 443
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ N +N I + ++ +RM+ C P+ T++ + +A +
Sbjct: 444 KMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMN 503
Query: 476 MNDKVYALEQE 486
++ + L QE
Sbjct: 504 KYEEAFGLFQE 514
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Query: 340 MSSVMEYMRKLQ----FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
+SSV+ + + F T+STY +IE + ++Y +QM +G+ F
Sbjct: 54 LSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFI 113
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
C+INGY G + + + V YN ++ A + + + +Y MK+
Sbjct: 114 CIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKD 173
Query: 456 HCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
P+ T++I+ +A K ND+V A + ++M
Sbjct: 174 GLIPNVFTYNILLKALCK---NDRVDAAHKLFVEM 205
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 97/246 (39%), Gaps = 15/246 (6%)
Query: 37 PNFNLIHCSVTSTNKHTSFSSESAVAAKKRLWKEGEYPGVS--ETSIPGYRSKRTPIKNL 94
PN C V K++ F +++ K L EG P T I G ++
Sbjct: 417 PNVVTYTCMVDVLCKNSMFDQANSLVEKMTL--EGCTPNTITFNTFIKGL-CGNGRVEWA 473
Query: 95 KKKLERKAKAKAWVN-TVAETFSDHVLK-KQWFQALQVFEMLKEQPFYQPKEGTYMKLLV 152
K LER N T D + + ++ +A +F+ ++ + QP TY +L
Sbjct: 474 MKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNL-QPNLVTYNTVLY 532
Query: 153 LLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQ 212
++G A ++F + + G P Y ++ AYC+ + A + ++ ++
Sbjct: 533 GFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWH 592
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIV-------LGGYGKAGM 265
PD+ TY++LI + M E + + PN T N + LG G +
Sbjct: 593 PDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHI 652
Query: 266 FDQMER 271
D + R
Sbjct: 653 LDDILR 658
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 160/347 (46%), Gaps = 4/347 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P+ TY L+ + G E A ++ +EMV GIE ++ LL C+ +++A
Sbjct: 317 KPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALE 376
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ +M +PD TYS LI+ L +M +R + P +T ++++ G
Sbjct: 377 IMQEMME-KGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGL 435
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ G +L M+ + KP+ T+++ A +G+V+ E+ R GI P+
Sbjct: 436 CRCGNLQGTNAILREMVMNGL-KPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPD 494
Query: 321 TRTFNILIGAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+N LI + K KRM + + +ME + + P + TY I+ +S G+ + + F
Sbjct: 495 VFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRP-NAHTYGAFIDGYSKAGEMEIADRYF 553
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
+M + G+ + + LI G+ G + S R ++ ++V Y+ +I +
Sbjct: 554 NEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRN 613
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ E ++ ++EK P++ T++ + K+G DK L +E
Sbjct: 614 GKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEE 660
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 150/334 (44%), Gaps = 2/334 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY ++ K G + A++V EM E+G P Y ++ CR L+DEA +
Sbjct: 213 PDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEA-IE 271
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L + PD+YTY LI R + + +M + + P +T N ++ G+
Sbjct: 272 LKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFM 331
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G +Q R+ M+ + ++ NT+L+ G+++ ++ G++P++
Sbjct: 332 RQGDIEQAFRIKDEMVACGI-EANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDS 390
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+T+++LI + + + + +++ M+K + T TY+ +I G+ + +
Sbjct: 391 QTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILRE 450
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G+K + + L+ +A G + + + I +V YN++I KA
Sbjct: 451 MVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKR 510
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ E M E+ RP++ T+ + Y+K G
Sbjct: 511 MEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAG 544
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 176/400 (44%), Gaps = 45/400 (11%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H + +A VF + + Q + TY L+ L ++G+ A +F+E+ E+G+ P
Sbjct: 575 HCKEGNVTEAFSVFRFILSRRVLQDVQ-TYSVLIHGLSRNGKMHEAFGIFSELQEKGLLP 633
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
Y +L++ C+ +D+A L +M + PD+ TY+ LI A E + L
Sbjct: 634 NAFTYNSLISGSCKQGNVDKASQLLEEM-CIKGINPDIVTYNILIDGLCKAGEIERAKNL 692
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
+ D++ R +TPN VT ++ GY K+ ++L ML PD + N IL+
Sbjct: 693 FDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGV-PPDAFIYNVILNFCC 751
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP---- 353
+ + + +++ G T +FN LI Y K + + ++E M + QF
Sbjct: 752 KEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHV 810
Query: 354 ---------------------W----------TSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
W T+ TY +++ + ++G+ + FE+M
Sbjct: 811 TYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEM 870
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE---NVSFYNAVISACIKA 439
A+G++ D T+ +I+ Y G V+ + +L ++ + +V+ Y+A+I A K
Sbjct: 871 VAKGIEPDKMTYYVMIDAYCREG---NVMEACKLKDEILVKGMPMSVAAYDALIQALCKK 927
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
++ E+ ++ + E R T S++ + G D+
Sbjct: 928 EEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDE 967
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 158/381 (41%), Gaps = 40/381 (10%)
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
+ EML+ + +P TY + K+G+ E+A + FNEM+ G+ P +YTAL+ +
Sbjct: 518 LMEMLERR--LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGH 575
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
C+ + EAF + + Q DV TYS LI + ++ ++ E+ + PN
Sbjct: 576 CKEGNVTEAFSVFRFILSRRVLQ-DVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPN 634
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
T N ++ G K G D+ ++L M PD+ T N ++ G+++ + +
Sbjct: 635 AFTYNSLISGSCKQGNVDKASQLLEEMCIKGI-NPDIVTYNILIDGLCKAGEIERAKNLF 693
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
+ G+ P T+ ++ Y K + ++E M P + YN ++
Sbjct: 694 DDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKE 753
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFY 429
+ F++M +G A T +F LI GY +G + + + Q N Y
Sbjct: 754 EKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTY 812
Query: 430 NAVISACIKADDLMEMERVYKRMKEKHC-------------------------------- 457
++I KA + E +R++ M+E++
Sbjct: 813 TSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVA 872
Query: 458 ---RPDSETFSIMTEAYAKEG 475
PD T+ +M +AY +EG
Sbjct: 873 KGIEPDKMTYYVMIDAYCREG 893
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 157/373 (42%), Gaps = 35/373 (9%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK--- 206
LL + K+G+ E A ++ EM+E+G+EP + Y+ L+ +CR + AF L++MK
Sbjct: 361 LLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRK 420
Query: 207 -------------TLPNC------------------QPDVYTYSTLIKACVDAMRFELIE 235
L C +P+ Y+TL+ A R E
Sbjct: 421 LAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESR 480
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
+ + M E+ + P+ N ++ G+ KA ++ L MLE +P+ T +
Sbjct: 481 MILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRL-RPNAHTYGAFIDG 539
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
++ G++++ +R++ + + G+ P + LI + K+ + SV ++ +
Sbjct: 540 YSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQD 599
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
TY+ +I S G F ++ +G+ + T+ LI+G G K +
Sbjct: 600 VQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 659
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
I ++ YN +I KA ++ + ++ ++ + P+ T++ M + Y K
Sbjct: 660 EMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK 719
Query: 476 MNDKVYALEQEKL 488
+ L +E L
Sbjct: 720 NPTAAFQLLEEML 732
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 35/183 (19%), Positives = 77/183 (42%)
Query: 313 RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
+NF P + N L+G K + V + M + TY N+I A +G+
Sbjct: 172 KNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNV 231
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAV 432
K + +M +G + T+ +I G A L + I R + ++ Y+ +
Sbjct: 232 KDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDIL 291
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLL 492
I+ E + + M + +P+ T++ + + + ++G ++ + ++ E + +
Sbjct: 292 INGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGI 351
Query: 493 EAS 495
EA+
Sbjct: 352 EAN 354
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 159/373 (42%), Gaps = 24/373 (6%)
Query: 117 DHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIE 176
D L+K+ + + + +L E + G MKLL +EM G +
Sbjct: 5 DRQLEKECYPDVITYTILIEATCAESGVGQAMKLL----------------DEMGSRGCK 48
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
P Y L+ C+ +DEA LN M + + QP+V T++ ++++ R+ E
Sbjct: 49 PDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGS-QPNVITHNIILRSMCSTGRWMDAEK 107
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
L +M + +P+ VT NI++ + G+ + +L M + C P+ + N +L F
Sbjct: 108 LLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKM-PTHGCTPNSLSYNPLLHGF 166
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
+ ++D ++ E + G P+ T+N ++ A K K+ + +E + +L S
Sbjct: 167 CKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKD---GKVDAAVELLNQLSSKGCS 223
Query: 357 S---TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
TYN VI+ S +G +M +G+K D T+ LI G + G + I
Sbjct: 224 PVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKF 283
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ N YN+++ KA M K C+P +++I+ E A
Sbjct: 284 FHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIAN 343
Query: 474 EGMNDKVYALEQE 486
EG+ + L E
Sbjct: 344 EGLAKEALELLNE 356
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 121/267 (45%), Gaps = 7/267 (2%)
Query: 123 QWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
+W A ++ EM+++ P T+ L+ L + G A + +M G P
Sbjct: 101 RWMDAEKLLTEMVRKG--CSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLS 158
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQD 240
Y LL +C+ +D A L M + C PD+ TY+T++ A C D +E L Q
Sbjct: 159 YNPLLHGFCKEKKMDRAIQYLEIMVS-RGCYPDIVTYNTMLTALCKDGKVDAAVELLNQ- 216
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
+ + +P +T N V+ G K G DQ +L M KPDV T +++++ + +G
Sbjct: 217 LSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEM-RGKGLKPDVITYSSLIAGLSREG 275
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+V+ +++ FG+ P T+N ++ K + D+ + YM T +Y
Sbjct: 276 KVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYT 335
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGM 387
+IE ++ G AK ++ + G+
Sbjct: 336 ILIEGIANEGLAKEALELLNELCSRGV 362
>gi|8778269|gb|AAF79278.1|AC068602_1 F14D16.2 [Arabidopsis thaliana]
Length = 977
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 153/332 (46%), Gaps = 4/332 (1%)
Query: 116 SDHVLKK--QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE 173
++ VLK+ + AL F LK QP ++ TY ++ LG++ Q K+ +EMV +
Sbjct: 451 ANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRD 510
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
G +P Y L+ +Y R + ++EA NQM+ C+PD TY TLI A ++
Sbjct: 511 GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQE-AGCKPDRVTYCTLIDIHAKAGFLDI 569
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
+YQ M ++P+T T ++++ GKAG ++ M++ C P++ T N ++
Sbjct: 570 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG-CTPNLVTYNIMM 628
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
+ A + Y +N G +P+ T++I++ G ++ +V M++ +
Sbjct: 629 DLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 688
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
Y +++ + G+ + ++ M G++ + T L++ + +
Sbjct: 689 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYEL 748
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEM 445
++ L + ++ Y ++S C ++M
Sbjct: 749 LQNMLALGLRPSLQTYTLLLSCCTDGRSKLDM 780
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 133/320 (41%), Gaps = 5/320 (1%)
Query: 72 EYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWF--QALQ 129
++ G + T++ G + + K L+ + NTV H + + +A+
Sbjct: 478 KHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMN 537
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
VF ++E +P TY L+ + K+G ++A ++ M G+ P Y+ ++
Sbjct: 538 VFNQMQEAG-CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCL 596
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
+ + A +M C P++ TY+ ++ A ++ LY+DM P+
Sbjct: 597 GKAGHLPAAHKLFCEMVD-QGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 655
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
VT +IV+ G G ++ E V + M + PD ++ ++ G V+ +WY
Sbjct: 656 KVTYSIVMEVLGHCGYLEEAEAVFTEM-QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 714
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
+ + G+ P T N L+ + + + +++ M L + TY ++ +D
Sbjct: 715 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 774
Query: 370 GDAKHMEYTFEQMHAEGMKA 389
M + + M + G A
Sbjct: 775 RSKLDMGFCGQLMASTGHPA 794
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
L++ + D + N +L + G W + R G + T+ ++G G+ +
Sbjct: 439 LQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLK--RQPGFKHDGHTYTTMVGNLGRAKQ 496
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
+ ++ +++ M + + TYN +I ++ F QM G K D T+C
Sbjct: 497 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 556
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
LI+ +A AG + + ++ + Y+ +I+ KA L +++ M ++
Sbjct: 557 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 616
Query: 457 CRPDSETFSIMTEAYAK 473
C P+ T++IM + +AK
Sbjct: 617 CTPNLVTYNIMMDLHAK 633
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 87/210 (41%), Gaps = 6/210 (2%)
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
K D T T++ Q + + ++ G P T T+N LI +YG+ ++ +
Sbjct: 478 KHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMN 537
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
V M++ TY +I+ + G +++M A G+ DT T+ +IN
Sbjct: 538 VFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLG 597
Query: 403 NAGLF---HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
AG HK+ + N+ YN ++ KA + ++Y+ M+ P
Sbjct: 598 KAGHLPAAHKLFCEM---VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 654
Query: 460 DSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
D T+SI+ E G ++ A+ E Q
Sbjct: 655 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQ 684
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
E ++ L + N V++ +D G+A Y ++ G K D T+ ++ A
Sbjct: 437 EALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQ--PGFKHDGHTYTTMVGNLGRA 494
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
F + + + N YN +I + +A+ L E V+ +M+E C+PD T+
Sbjct: 495 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTY 554
Query: 465 SIMTEAYAKEGMND 478
+ + +AK G D
Sbjct: 555 CTLIDIHAKAGFLD 568
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 150/356 (42%), Gaps = 15/356 (4%)
Query: 131 FEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAA 188
EML + + F P TY L+ L KSG E AR F+EM+E G +P Y L++
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP 248
+C+ D A +L Q T+ C D++TY+ ++ + E L + + TP
Sbjct: 241 FCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTP 300
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW 308
T N +L G K G ++ +L ++++ C PDV T +++ + +R
Sbjct: 301 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNG-CTPDVVTYTSLIDGLGKE------KRS 353
Query: 309 YEKFRNF------GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+E ++ F G+ +T + LI + + SSV + M T + +
Sbjct: 354 FEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTM 413
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I+ S G F+ M A G+ + + LI+G A + + K
Sbjct: 414 IDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 473
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ YN +I K+ D+ + M E C+PD T++I+ + K G D
Sbjct: 474 TPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTD 529
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 151/374 (40%), Gaps = 42/374 (11%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L K+G+ A ++F M G+ P +Y+AL+ C+ +D A L QMK C P
Sbjct: 136 LSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK-AFCTP 194
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
D TY+ LI + E + +M E P+ T NI++ G+ KAG D L
Sbjct: 195 DTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSL 254
Query: 274 S--------------------------------GMLESAT---CKPDVWTMNTILSVFAN 298
+ ++E T C P + T N +L+
Sbjct: 255 AQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCK 314
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
G+++ K + G P+ T+ LI GK++ + + + M +
Sbjct: 315 MGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVC 374
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
Y +I G ++ M + G D T +I+G + AG ++ ++VR+
Sbjct: 375 YTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAG---RIGAAVRIFK 431
Query: 419 KLQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++ +A N Y+A+I KA + + +MK+ C PD+ T++I+ + K G
Sbjct: 432 SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSG 491
Query: 476 MNDKVYALEQEKLQ 489
+ A E L+
Sbjct: 492 DVEAARAFFDEMLE 505
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 142/370 (38%), Gaps = 38/370 (10%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ LGK + A K+F EM G+ YTAL+ + I +A
Sbjct: 54 PDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSV 113
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
M T C PDV T ST+I A R +++ M+ R + PN V + ++ G
Sbjct: 114 YKTM-TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC 172
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
KA D +L+ M + A C PD T N ++ G V+ ++++ G P+
Sbjct: 173 KARKMDCALEMLAQM-KKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDV 231
Query: 322 RTFNILIGAYGKKRMYDKMS------------------------------------SVME 345
T+NILI + K D S ++ME
Sbjct: 232 YTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALME 291
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
+ T +TYN ++ MG + ++ G D T+ LI+G
Sbjct: 292 KITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEK 351
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ + + +A + Y A+I ++ + + VYK M C PD T S
Sbjct: 352 RSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLS 411
Query: 466 IMTEAYAKEG 475
M + +K G
Sbjct: 412 TMIDGLSKAG 421
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 151/363 (41%), Gaps = 40/363 (11%)
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
E A + ++ G PT Y ALL C+ ++EA L ++ C PDV TY++
Sbjct: 3 EEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD-NGCTPDVVTYTS 61
Query: 221 LIKACVDAMR-FELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
LI R FE + L+++M R + +TV ++ + G Q V M S
Sbjct: 62 LIDGLGKEKRSFEAYK-LFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTM-TS 119
Query: 280 ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
C PDV T++T++ + G++ R ++ G+ P ++ LI K R D
Sbjct: 120 HGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 179
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
++ M+K + TYN +I+ GD + F++M G K D T+ LI+
Sbjct: 180 ALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILIS 239
Query: 400 GYANAG--------------------LFHKVISSVR-LASKLQIAENVSF---------- 428
G+ AG H + V LA +I E V+
Sbjct: 240 GFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCT 299
Query: 429 -----YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
YNA+++ K L E + +++ + C PD T++ + + KE + + Y L
Sbjct: 300 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 359
Query: 484 EQE 486
+E
Sbjct: 360 FKE 362
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 100/245 (40%), Gaps = 2/245 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ LGK + A K+F EM G+ YTAL+ + I +A
Sbjct: 335 PDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSV 394
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
M T C PDV T ST+I A R +++ M+ R + PN V + ++ G
Sbjct: 395 YKTM-TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC 453
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
KA D +L+ M + A C PD T N ++ G V+ ++++ G P+
Sbjct: 454 KARKMDCALEMLAQM-KKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDV 512
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+NILI + K D V + M + TY +I F+
Sbjct: 513 YTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQH 572
Query: 382 MHAEG 386
M G
Sbjct: 573 MKERG 577
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 90/211 (42%), Gaps = 6/211 (2%)
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
C P + T N +L+ G+++ K + G P+ T+ LI GK++ +
Sbjct: 17 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAY 76
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+ + M + Y +I G ++ M + G D T +I+G
Sbjct: 77 KLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGL 136
Query: 402 ANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
+ AG ++ ++VR+ ++ +A N Y+A+I KA + + +MK+ C
Sbjct: 137 SKAG---RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCT 193
Query: 459 PDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
PD+ T++++ + K G + A E L+
Sbjct: 194 PDTITYNVLIDGLCKSGDVEAARAFFDEMLE 224
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 3/117 (2%)
Query: 131 FEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAA 188
EML + + F P TY L+ L KSG E AR F+EM+E G +P Y L++
Sbjct: 462 LEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 521
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+C+ D A + M + C +V TY LI + +Q M ER
Sbjct: 522 FCKAGNTDAACGVFDDMSS-SRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 149/327 (45%), Gaps = 10/327 (3%)
Query: 157 SGQPELARKVFNE-MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
SGQ + A+ NE M+ G +P Y L+ C+ + A +N+M C+P+V
Sbjct: 367 SGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSR-RGCEPNV 425
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
TY+ L+ A E + +M R +T N+V N ++ + +LS
Sbjct: 426 ITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSE 485
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID---PETRTFNILIGAYG 332
M CKPD++T N+++ +VD ++ + F N +D T+N LI A
Sbjct: 486 MCTKG-CKPDLFTYNSLIYGLC---KVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALL 541
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
++ + K +++ M TYN +I+AF +G+ + +EQM +G+ ADT
Sbjct: 542 RRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTI 601
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
+ +ING G +R A ++ YN+V++ K + E ++ R+
Sbjct: 602 SCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRL 661
Query: 453 KEKHCRPDSETFSIMTEAYAKEGM-ND 478
+ + RPD+ T++ KEGM ND
Sbjct: 662 QVEGVRPDAFTYNTFISWQCKEGMVND 688
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 122/275 (44%), Gaps = 8/275 (2%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L K+G E A V +EM G+ +Y L+ A CR + A
Sbjct: 422 EPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALN 481
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L++M T C+PD++TY++LI R + L+ +M N VT N ++
Sbjct: 482 LLSEMCT-KGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHAL 540
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ G F + +++ ML C D T N ++ F G ++ YE+ G+ +
Sbjct: 541 LRRGAFQKALTLVNDMLFRG-CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGAD 599
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKL---QFPWTSSTYNNVIEAFSDMGDAKHMEY 377
T + NI+I K K+ + E++R F TYN+V+ +G K
Sbjct: 600 TISCNIMINGLCK---VGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALN 656
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVIS 412
F+++ EG++ D T+ I+ G+ + S
Sbjct: 657 LFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACS 691
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 145/371 (39%), Gaps = 10/371 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QA+++ ++ +P +Y +L +L P++A VF +M+ +G+ PT + +
Sbjct: 165 QAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIV 224
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A C + +D A L M T C P+ Y TLI A + L ++M
Sbjct: 225 MKALCMFNEVDSACSLLRDM-TKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMG 283
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ T N V+ G K +++ ML PD T +L G+++
Sbjct: 284 CMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGF-YPDNMTYGFLLHGLCRIGKLNEA 342
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYG-KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ K P N LI Y ++ + S + E M F TYN ++
Sbjct: 343 RKILIKIPC----PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMH 398
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
G +M G + + T+ L+NG AGL + + S +
Sbjct: 399 GLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTI 458
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
N YN +I A + + + + M K C+PD T++ + K D+ + L
Sbjct: 459 NSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLF 518
Query: 485 QEKLQMLLEAS 495
MLL+ +
Sbjct: 519 H---NMLLDGA 526
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 140/353 (39%), Gaps = 12/353 (3%)
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
L++FE + Q Y Y + LG G+ +L K+ +M EEGI ++ ++
Sbjct: 96 LEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMK 155
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVT 247
Y + +A L M+ + C+P +Y +++ V ++ ++ DM + V+
Sbjct: 156 HYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVS 215
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT---CKPDVWTMNTILSVFANKGQVDM 304
P T IV+ MF++++ S +L T C P+ T++ + K QV
Sbjct: 216 PTVFTFGIVMKAL---CMFNEVDSACS-LLRDMTKHGCVPNSIVYQTLIHALSQKNQVSE 271
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ E+ G P+ +TFN +I K + +++ M F + TY ++
Sbjct: 272 ALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLH 331
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR-LASKLQIA 423
+G ++ + LINGY +G + S +
Sbjct: 332 GLCRIGKLNEARKILIKIPC----PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQ 387
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
++ YN ++ K L + M + C P+ T++I+ K G+
Sbjct: 388 PDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGL 440
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 90/223 (40%), Gaps = 37/223 (16%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L K + + A ++F+ M+ +G Y L+ A R +A
Sbjct: 492 KPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALT 551
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+N M C D TY+ LIKA E LY+ M + +T++ NI++ G
Sbjct: 552 LVNDM-LFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGL 610
Query: 261 GKAG--------MFDQMER-----------VLSGM---------------LESATCKPDV 286
K G + D + R VL+G+ L+ +PD
Sbjct: 611 CKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDA 670
Query: 287 WTMNTILSVFANKGQV-DMMERWYEKFRNFGIDPETRTFNILI 328
+T NT +S +G V D +Y N G P T+N+L+
Sbjct: 671 FTYNTFISWQCKEGMVNDACSFFYRGIEN-GFVPSNLTWNVLV 712
>gi|326487288|dbj|BAJ89628.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 461
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 153/343 (44%), Gaps = 2/343 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P Y LL L LA ++ +M ++G+ Y LL AY R +++++
Sbjct: 119 RPDAAHYNALLEGLLARAHLRLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWW 178
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +MK + D YSTL++ D+ ++ L +M E V + N ++ +
Sbjct: 179 VLGEMKRW-GIRLDTAGYSTLVRLYRDSGMWKKATDLIMEMQEVGVELDVKIYNGLIDTF 237
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
GK G ++ M KPD+ T N ++ G + R+ + G+ P+
Sbjct: 238 GKYGQLADARKMFEKM-RGQGIKPDIETWNALIRWHCRVGNMKRALRFLAAMQEEGMYPD 296
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+ F +I G++ +D++ + + MR F + + Y +++ + G + +
Sbjct: 297 PKIFITIINRLGEQGKWDELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQECVA 356
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+ AE ++ FC L N YA GL + +S ++L I N+ N +I+A A
Sbjct: 357 ALKAENLQLSPSIFCVLANAYAQQGLCEQTVSVLQLMEAEGIEPNLVMLNLLINAFSTAG 416
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+E + V++ +K+ PD T++ + +A+ + +KV L
Sbjct: 417 RHLEAQAVFQHIKDSGMSPDVVTYTTLMKAFMRVKRYEKVRLL 459
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
+ G E V M EGIEP + L+ A+ EA +K PDV
Sbjct: 379 QQGLCEQTVSVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAQAVFQHIKD-SGMSPDV 437
Query: 216 YTYSTLIKACVDAMRFELIETLY 238
TY+TL+KA + R+E + LY
Sbjct: 438 VTYTTLMKAFMRVKRYEKVRLLY 460
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 149/327 (45%), Gaps = 10/327 (3%)
Query: 157 SGQPELARKVFNE-MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
SGQ + A+ NE M+ G +P Y L+ C+ + A +N+M C+P+V
Sbjct: 367 SGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSR-RGCEPNV 425
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
TY+ L+ A E + +M R +T N+V N ++ + +LS
Sbjct: 426 ITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSE 485
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID---PETRTFNILIGAYG 332
M CKPD++T N+++ +VD ++ + F N +D T+N LI A
Sbjct: 486 MCTKG-CKPDLFTYNSLIYGLC---KVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALL 541
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
++ + K +++ M TYN +I+AF +G+ + +EQM +G+ ADT
Sbjct: 542 RRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTI 601
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
+ +ING G +R A ++ YN+V++ K + E ++ R+
Sbjct: 602 SCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRL 661
Query: 453 KEKHCRPDSETFSIMTEAYAKEGM-ND 478
+ + RPD+ T++ KEGM ND
Sbjct: 662 QVEGVRPDAFTYNTFISWQCKEGMVND 688
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 145/371 (39%), Gaps = 10/371 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QA+++ ++ +P +Y +L +L P++A VF +M+ +G+ PT + +
Sbjct: 165 QAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIV 224
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A C + +D A L M T C P+ Y TLI A + L ++M
Sbjct: 225 MKALCMFNEVDSACSLLRDM-TKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMG 283
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ T N V+ G K +++ ML PD T +L G+++
Sbjct: 284 CMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGF-YPDNMTYGFLLHGLCRIGKLNEA 342
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYG-KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ K P N LI Y ++ + S + E M F TYN ++
Sbjct: 343 RKILIKIPC----PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMH 398
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
G +M G + + T+ L+NG AGL + + S +
Sbjct: 399 GLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTI 458
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
N YN +I A + + + + M K C+PD T++ + K D+ + L
Sbjct: 459 NSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLF 518
Query: 485 QEKLQMLLEAS 495
MLL+ +
Sbjct: 519 H---NMLLDGA 526
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 140/353 (39%), Gaps = 12/353 (3%)
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
L++FE + Q Y Y + LG G+ +L K+ +M EEGI ++ ++
Sbjct: 96 LEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMK 155
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVT 247
Y + +A L M+ + C+P +Y +++ V ++ ++ DM + V+
Sbjct: 156 HYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVS 215
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT---CKPDVWTMNTILSVFANKGQVDM 304
P T IV+ MF++++ S +L T C P+ T++ + K QV
Sbjct: 216 PTVFTFGIVMKAL---CMFNEVDSACS-LLRDMTKHGCVPNSIVYQTLIHALSQKNQVSE 271
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ E+ G P+ +TFN +I K + +++ M F + TY ++
Sbjct: 272 ALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLH 331
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR-LASKLQIA 423
+G ++ + LINGY +G + S +
Sbjct: 332 GLCRIGKLNEARKILIKIPC----PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQ 387
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
++ YN ++ K L + M + C P+ T++I+ K G+
Sbjct: 388 PDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGL 440
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 90/223 (40%), Gaps = 37/223 (16%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L K + + A ++F+ M+ +G Y L+ A R +A
Sbjct: 492 KPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALT 551
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+N M C D TY+ LIKA E LY+ M + +T++ NI++ G
Sbjct: 552 LVNDM-LFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGL 610
Query: 261 GKAG--------MFDQMER-----------VLSGM---------------LESATCKPDV 286
K G + D + R VL+G+ L+ +PD
Sbjct: 611 CKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDA 670
Query: 287 WTMNTILSVFANKGQV-DMMERWYEKFRNFGIDPETRTFNILI 328
+T NT +S +G V D +Y N G P T+N+L+
Sbjct: 671 FTYNTFISWQCKEGMVNDACLFFYRGIEN-GFVPSNLTWNVLV 712
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 155/346 (44%), Gaps = 4/346 (1%)
Query: 143 KEGTYMKLLVLLG--KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
K G Y ++L G K G+ A +V +V G+ T +Y L+ YC+ ++ AF
Sbjct: 325 KIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFS 384
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
QMK+ +PD TY+ LI R L +M++ V P+ T N ++ Y
Sbjct: 385 IFQQMKSRL-IRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAY 443
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
G+AG ++ +LS M E KP+V + +I++ F G++ + + P
Sbjct: 444 GRAGQLEKCFIILSDMQEKGL-KPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPG 502
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+ +N +I AY + D+ + E M+ P + TYN +I+ E +
Sbjct: 503 AQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLD 562
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+ G+ D ++ LI+ + + + K I + Y + S+ A
Sbjct: 563 SLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAG 622
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ EME +Y++M +K P S ++IM +AYAK G KV AL +E
Sbjct: 623 RVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKE 668
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 132/285 (46%), Gaps = 5/285 (1%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A +F+ +K + +P TY L+ LGK + A + EM + G+ P+ E + L+
Sbjct: 382 AFSIFQQMKSR-LIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLI 440
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERS 245
AY R +++ F+ L+ M+ +P+V +Y +++ A C + E + L DM +
Sbjct: 441 DAYGRAGQLEKCFIILSDMQE-KGLKPNVVSYGSIVNAFCKNGKILEAVAIL-DDMFIKD 498
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
V P N ++ Y + G DQ +L+ ++S+ P + T N ++ + Q+
Sbjct: 499 VLPGAQVYNAIIDAYIECGSTDQ-AFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEA 557
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E + RN+G+ P+ ++N LI A + D+ + + M K + TY + +
Sbjct: 558 EELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSS 617
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
G ME ++QM + + + + +++ YA G KV
Sbjct: 618 LGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKV 662
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 144/345 (41%), Gaps = 2/345 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P +Y ++ L K+G A K+F+EM E+ + P Y ++ + + ++ F
Sbjct: 186 PNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRL 245
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+QM +P+V TY+ L+ A R + +M R + P+ T +I+ G+
Sbjct: 246 WSQMLR-HGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHS 304
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G M + ++ K +T + +L+ G++ E + N G+ T
Sbjct: 305 RTGDSQTMLSLFEESVKKGV-KIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTT 363
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+N LI Y + + S+ + M+ TYN +I + +
Sbjct: 364 VIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIE 423
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G+ +TF LI+ Y AG K + + + NV Y ++++A K
Sbjct: 424 MEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGK 483
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
++E + M K P ++ ++ + +AY + G D+ + L ++
Sbjct: 484 ILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEK 528
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 121/264 (45%), Gaps = 4/264 (1%)
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
V EM E+ P T+ L+ G++GQ E + ++M E+G++P Y +++ A+
Sbjct: 421 VIEM--EKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAF 478
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
C+N I EA L+ M + + P Y+ +I A ++ + L + M V P+
Sbjct: 479 CKNGKILEAVAILDDM-FIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPS 537
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
VT N+++ G K + E +L L + PDV + NT++S + D
Sbjct: 538 IVTYNLLIKGLCKQSQISEAEELLDS-LRNYGLAPDVISYNTLISACCYRSNTDRALELE 596
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
++ GI P RT+ +L + G +M ++ + M S YN +++A++
Sbjct: 597 KEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKC 656
Query: 370 GDAKHMEYTFEQMHAEGMKADTKT 393
G+ +E ++M +G+ T
Sbjct: 657 GEESKVEALRKEMSDKGIAVGDYT 680
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 119/263 (45%), Gaps = 2/263 (0%)
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMD-ERSVTPNTVTQNIVLGGYGKAGMFDQME 270
+PD +T++ ++ACV A + + + M + + PN + N+V+ G KAG
Sbjct: 149 RPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAV 208
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
++ M E A P+ T NT++ KG ++ R + + G+ P T+N+L+
Sbjct: 209 KLFDEMPEKAVV-PNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSG 267
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
+ + ++V++ M + TY+ + + S GD++ M FE+ +G+K
Sbjct: 268 LCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIG 327
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
T L+NG G K ++ + + YN +I+ + DL +++
Sbjct: 328 AYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQ 387
Query: 451 RMKEKHCRPDSETFSIMTEAYAK 473
+MK + RPD T++ + K
Sbjct: 388 QMKSRLIRPDHITYNALINGLGK 410
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 6/166 (3%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QA + E +K P TY L+ L K Q A ++ + + G+ P Y L
Sbjct: 521 QAFMLAEKMKSSGV-PPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTL 579
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNC--QPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
++A C S D A L K + C +P TY L + A R +E LYQ M +
Sbjct: 580 ISACCYRSNTDRA---LELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLD 636
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM 289
+ V P + NI++ Y K G ++E + M + D +M
Sbjct: 637 KDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIAVGDYTSM 682
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 78/175 (44%), Gaps = 7/175 (4%)
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS-TYNNVIEAFSDMGDAKHMEY 377
P+T T+N + A D+ ++ M P ++ +YN VI G
Sbjct: 150 PDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVK 209
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL---QIAENVSFYNAVIS 434
F++M + + + T+ +I+G+ G S RL S++ + NV YN ++S
Sbjct: 210 LFDEMPEKAVVPNHITYNTMIDGHIKKGDLE---SGFRLWSQMLRHGLKPNVITYNVLLS 266
Query: 435 ACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+A + E V M + PD T+SI+ + +++ G + + +L +E ++
Sbjct: 267 GLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVK 321
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 167/414 (40%), Gaps = 43/414 (10%)
Query: 110 TVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNE 169
T E + V ++ +A + +M++ F +P Y L+ L + G+ + +FN+
Sbjct: 28 TCVELVASCVKSRKLIEAFDLLQMMRHFKF-RPAFSAYTTLIGALSEVGESDRMLALFNQ 86
Query: 170 MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKT------------LPNC------ 211
M E G E L T L+ + R +D A L++MK+ +C
Sbjct: 87 MQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGK 146
Query: 212 ----------------QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI 255
PD TY++++ A R + +++ M++ P N
Sbjct: 147 VDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNT 206
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
++ GYG AG FD+ +L + C P V N IL+ KG+ D R +E+ +
Sbjct: 207 MIMGYGSAGKFDEAYSLLERQ-RAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRD 265
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
+ P T+NI+IG K + V + M++ T N +I+
Sbjct: 266 AM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEA 324
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE---NVSFYNAV 432
FE M + D TFC LI+G G +V + R+ ++ A+ NV Y ++
Sbjct: 325 CSIFEGMDYKVCSPDGATFCSLIDGLGKQG---RVDDAYRIYERMLDADQIPNVVVYTSL 381
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
I K D + ++YK M C PD + + K G +K AL +E
Sbjct: 382 IRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEE 435
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 162/396 (40%), Gaps = 39/396 (9%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL++FE +K P TY ++ +L K+G E A KV + M E G+ P +
Sbjct: 254 KALRIFEEMKRDAM--PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIM 311
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ +DEA M C PD T+ +LI R + +Y+ M +
Sbjct: 312 IDRLCKAQKLDEACSIFEGMD-YKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDAD 370
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN V ++ + K + ++ M+ S C PD+ +NT + G+ +
Sbjct: 371 QIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSG-CSPDLMLLNTYMDCVFKAGETEKG 429
Query: 306 ERWYEKFRNFGIDPETRTFNILI----------------------GAYGKKRMYD----- 338
+E+ + G P+TR+++ILI G R Y+
Sbjct: 430 RALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDG 489
Query: 339 --------KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
K ++E M+ + T TY +V++ + + FE+ + G++ +
Sbjct: 490 FCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELN 549
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
+ LI+G+ G + + + + NV +N ++ +KA+++ E ++
Sbjct: 550 QVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQ 609
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
MK+ C P+ T+ I+ K +K + QE
Sbjct: 610 SMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQE 645
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 151/369 (40%), Gaps = 40/369 (10%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQ- 212
GK G+ ++A K F+EM G+ P YT+++ C+ + +DEA QM+ N Q
Sbjct: 141 FGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQME--QNRQV 198
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
P Y Y+T+I A +F+ +L + + P+ V N +L GK G D+ R+
Sbjct: 199 PCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRI 258
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
M A P++ T N I+ + G V+ + + + G+ P RT NI+I
Sbjct: 259 FEEMKRDAM--PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLC 316
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM---------- 382
K + D+ S+ E M +T+ ++I+ G +E+M
Sbjct: 317 KAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVV 376
Query: 383 ---------------------HAEGMKADTKTFCCLINGYAN----AGLFHKVISSVRLA 417
+ E M++ L+N Y + AG K +
Sbjct: 377 VYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEI 436
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
+ Y+ +I + +KA E +Y MK++ C D+ ++ + + + K G
Sbjct: 437 KARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKV 496
Query: 478 DKVYALEQE 486
+K Y L +E
Sbjct: 497 NKAYQLLEE 505
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 150/348 (43%), Gaps = 3/348 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P Y +L LGK G+ + A ++F EM + + P Y ++ C+ ++ AF
Sbjct: 234 PSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMPNLPT-YNIIIGMLCKAGNVEAAFKV 292
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ MK P+V T + +I A + + ++++ MD + +P+ T ++ G G
Sbjct: 293 RDAMKE-AGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLG 351
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G D R+ ML++ P+V +++ F + + + Y++ G P+
Sbjct: 352 KQGRVDDAYRIYERMLDADQI-PNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDL 410
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
N + K +K ++ E ++ F + +Y+ +I + G A+ +
Sbjct: 411 MLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYA 470
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M +G DT+ + +I+G+ +G +K + + V Y +V+ K D
Sbjct: 471 MKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDR 530
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
L E +++ K + +S + + + K G D+ Y + +E +Q
Sbjct: 531 LDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQ 578
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 153/360 (42%), Gaps = 4/360 (1%)
Query: 117 DHVLKKQWF-QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
D + K Q +A +FE + + P T+ L+ LGK G+ + A +++ M++
Sbjct: 313 DRLCKAQKLDEACSIFEGM-DYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQ 371
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
P +YT+L+ + + ++ +M C PD+ +T + A E
Sbjct: 372 IPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMR-SGCSPDLMLLNTYMDCVFKAGETEKGR 430
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
L++++ R P+T + +I++ KAG + + M + C D NT++
Sbjct: 431 ALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQG-CVLDTRAYNTVIDG 489
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
F G+V+ + E+ + G P T+ ++ K D+ + E +
Sbjct: 490 FCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELN 549
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
Y+++I+ F +G E+M +G+ + T+ CL++G A ++ + +
Sbjct: 550 QVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQ 609
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
L+ N Y +I+ K + ++ M+++ +P++ T++ M AK G
Sbjct: 610 SMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSG 669
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/361 (19%), Positives = 149/361 (41%), Gaps = 39/361 (10%)
Query: 114 TFSDHVLKK-QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE 172
T+ D V K + + +FE +K + F P +Y L+ L K+G +++ M +
Sbjct: 415 TYMDCVFKAGETEKGRALFEEIKARGFL-PDTRSYSILIHSLVKAGFARETYELYYAMKD 473
Query: 173 EGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE 232
+G Y ++ +C++ +++A+ L +MKT+ + P V TY +++ R +
Sbjct: 474 QGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGH-HPTVVTYGSVVDGLAKIDRLD 532
Query: 233 LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTI 292
L+++ + N V + ++ G+GK G D+ V+ M++ P+V+T N +
Sbjct: 533 EAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGL-TPNVYTWNCL 591
Query: 293 LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF 352
L +++ ++ ++ P T+ ILI K R ++K + M+K
Sbjct: 592 LDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGL 651
Query: 353 PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVIS 412
+ TY +I + G+ FE+ A G D+ +
Sbjct: 652 KPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSAS------------------- 692
Query: 413 SVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
YNA+I A+ ++ ++++ + K C ++T + +A
Sbjct: 693 ----------------YNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALH 736
Query: 473 K 473
K
Sbjct: 737 K 737
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 132/349 (37%), Gaps = 3/349 (0%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+ P T ++L+ KS + A + M P YT L+ A D
Sbjct: 22 FGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRML 81
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
NQM+ L + +V+ +TLI+ R + +L +M + + V N+ +
Sbjct: 82 ALFNQMQELGY-EVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDC 140
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+GK G D + M + PD T +++ V ++D +E+ P
Sbjct: 141 FGKVGKVDMAWKFFHEMKANGLV-PDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVP 199
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+N +I YG +D+ S++E R + YN ++ G F
Sbjct: 200 CAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIF 259
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
E+M + M + T+ +I AG + + NV N +I KA
Sbjct: 260 EEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKA 318
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
L E +++ M K C PD TF + + K+G D Y + + L
Sbjct: 319 QKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERML 367
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 140/345 (40%), Gaps = 18/345 (5%)
Query: 165 KVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
++ EM G PT L+A+ ++ + EAF L M+ +P Y+TLI A
Sbjct: 12 QILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKF-RPAFSAYTTLIGA 70
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
+ + + L+ M E N ++ + + G D +L M +S T
Sbjct: 71 LSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEM-KSNTFDA 129
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
D+ N + F G+VDM +++ + + G+ P+ T+ ++G K D+ +
Sbjct: 130 DIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIF 189
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
E M + + + YN +I + G E+ A+G + C++
Sbjct: 190 EQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKK 249
Query: 405 GLFHKVISSVRLASKLQ--IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
G K ++R+ +++ N+ YN +I KA ++ +V MKE P+
Sbjct: 250 G---KTDKALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVR 306
Query: 463 TFSIMTEAYAK-----------EGMNDKVYALEQEKLQMLLEASG 496
T +IM + K EGM+ KV + + L++ G
Sbjct: 307 TINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLG 351
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 71/184 (38%), Gaps = 1/184 (0%)
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
D +E+ + G P T L+ + K R + +++ MR +F S Y +
Sbjct: 8 DYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTL 67
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I A S++G++ M F QM G + + LI ++ G +S +
Sbjct: 68 IGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTF 127
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVY 481
++ YN I K + + + MK PD T++ M K +++ V
Sbjct: 128 DADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVE 187
Query: 482 ALEQ 485
EQ
Sbjct: 188 IFEQ 191
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 150/339 (44%), Gaps = 2/339 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY ++ + G A K+F+EM +G+EP +T L+ YC+ + +AF
Sbjct: 827 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 886
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
N M C P+V TY+TLI + L +M + + PN T N ++ G
Sbjct: 887 HNHM-IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 945
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K+G ++ + L G E+A D T T++ + G++D + ++ G+ P
Sbjct: 946 KSGNIEEAVK-LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 1004
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
TFN+L+ + M + ++ +M ++T+N++++ + + K ++
Sbjct: 1005 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 1064
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M + G+ D KT+ L+ G+ A + + + +VS Y+ +I +K
Sbjct: 1065 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 1124
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+E V+ +M+ + D E F ++ K D +
Sbjct: 1125 FLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTI 1163
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 162/367 (44%), Gaps = 7/367 (1%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
L K W ++ E++K + +P Y ++ LL + + A + F+EM+ +GI P
Sbjct: 740 LDKVW----KLIEVMKRKGL-KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT 794
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+YT L+ +C+ I A +M + + PDV TY+ +I L+
Sbjct: 795 VVYTTLIDGFCKRGDIRAASKFFYEMHS-RDITPDVLTYTAIISGFCQIGDMVEAGKLFH 853
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
+M + + P++VT ++ GY KAG RV + M++ A C P+V T T++ +
Sbjct: 854 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ-AGCSPNVVTYTTLIDGLCKE 912
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G +D + G+ P T+N ++ K ++ ++ + TY
Sbjct: 913 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 972
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+++A+ G+ + ++M +G++ TF L+NG+ G+ +
Sbjct: 973 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 1032
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
IA N + +N+++ ++L +YK M + PD +T+ + + + K +
Sbjct: 1033 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 1092
Query: 480 VYALEQE 486
+ L QE
Sbjct: 1093 AWFLFQE 1099
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 149/364 (40%), Gaps = 42/364 (11%)
Query: 163 ARKVFNEMVEEGIEPTPE---LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYS 219
AR+VF +M+ G+ + + +Y L+ C + A + + + C +V +Y+
Sbjct: 637 ARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA--TAIIVFREFPEVGVCW-NVASYN 693
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
+I R + L M+ + TP+ ++ + V+ GY + G D++ +++ +++
Sbjct: 694 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE-VMKR 752
Query: 280 ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
KP+ + +I+ + ++ E + + GI P+T + LI + K+
Sbjct: 753 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 812
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
S M TY +I F +GD F +M +G++ D+ TF LIN
Sbjct: 813 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 872
Query: 400 GYANAG--------------------------LFHKVISSVRLAS---------KLQIAE 424
GY AG L + L S K+ +
Sbjct: 873 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 932
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
N+ YN++++ K+ ++ E ++ + D+ T++ + +AY K G DK +
Sbjct: 933 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 992
Query: 485 QEKL 488
+E L
Sbjct: 993 KEML 996
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 14/181 (7%)
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G P+ +++ ++ Y + DK+ ++E M++ S Y ++I +
Sbjct: 719 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 778
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL-------QIAENVSF 428
E F +M +G+ DT + LI+G+ G +R ASK I +V
Sbjct: 779 EEAFSEMIRQGILPDTVVYTTLIDGFCKRG-------DIRAASKFFYEMHSRDITPDVLT 831
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
Y A+IS + D++E +++ M K PDS TF+ + Y K G + + +
Sbjct: 832 YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 891
Query: 489 Q 489
Q
Sbjct: 892 Q 892
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 79/196 (40%), Gaps = 9/196 (4%)
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
D + V + G + R +EK N+G+ + N+ + K Y ++++
Sbjct: 617 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKD-CYKTATAII 675
Query: 345 EYMRKLQFP-----WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+ +FP W ++YN VI +G K + M +G D ++ ++N
Sbjct: 676 VFR---EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 732
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
GY G KV + + + + N Y ++I + L E E + M + P
Sbjct: 733 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 792
Query: 460 DSETFSIMTEAYAKEG 475
D+ ++ + + + K G
Sbjct: 793 DTVVYTTLIDGFCKRG 808
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 144/327 (44%), Gaps = 18/327 (5%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
++G ++ +M G+ P +YT L+ A CRN ID+A V ++M L +
Sbjct: 119 ENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDL-GLAANQ 177
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------MFDQ 268
Y Y+ +I + LYQ M V PN T N ++ Y + G +FD+
Sbjct: 178 YIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDE 237
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
+ + C + T N ++ KGQV E E+ + I+P TRTFN+L+
Sbjct: 238 ISK------RGVAC--NAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLM 289
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
DK S +E ++ + T TYN +I FS +G++ + +M G+
Sbjct: 290 DGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGIS 349
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA-CIKADDLMEMER 447
T+ L+N + + K L ++ + + Y +I CIK +++E +
Sbjct: 350 PSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKG-NMVEASK 408
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKE 474
+YK M E H +P+ ++ M Y KE
Sbjct: 409 LYKSMVEMHLQPNDVIYNTMINGYCKE 435
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 163/357 (45%), Gaps = 18/357 (5%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
Q+L F+++ + + P ++ L LL KSG + F E + + +
Sbjct: 56 QSLDGFKLMVLKG-HSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQFDVYSFWITI 114
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
A+C N + + F L QM+T+ P+V+ Y+ LI+AC + + ++ MD+
Sbjct: 115 -KAFCENGNVSKGFELLAQMETM-GVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLG 172
Query: 246 VTPNTVTQNIVLGGYGKAG-------MFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
+ N I++ G+ K G ++ +M+ L G+L P+++T N++++ +
Sbjct: 173 LAANQYIYTIMINGFFKKGYKKDGFELYQKMK--LVGVL------PNLYTYNSLITEYCR 224
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
G++ + + +++ G+ T+NILIG +K K ++E M++ T+ T
Sbjct: 225 DGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRT 284
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
+N +++ + G E++ G+ T+ LI+G++ G V VR
Sbjct: 285 FNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREME 344
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
I+ + Y +++ +++DD+ + ++ MK PD T+ ++ +G
Sbjct: 345 DRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKG 401
>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
Length = 668
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 158/348 (45%), Gaps = 2/348 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P+ Y LL + G + A +V +EM + G+ P Y+ L+ AY R + A +
Sbjct: 296 KPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARI 355
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +M+ +P Y +S ++ D ++ + ++M V P+ N+++ +
Sbjct: 356 LLKEMEA-DGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTF 414
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
GK + M E +PDV T NT++ G+ D +E+ R P
Sbjct: 415 GKYNCLGHAMDAFNKMREEGI-EPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPG 473
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T T+NI+I G++ ++ + +++ M++ TY +++ + G K E
Sbjct: 474 TTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIE 533
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
M A+G+K + L+N YA GL ++ V+ + ++ N++I+A +
Sbjct: 534 AMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDR 593
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
++E V + M+E RPD T++ + +A + DKV + +E +
Sbjct: 594 RVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMI 641
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 145/326 (44%), Gaps = 2/326 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E TY L+ ++G+ E AR + EM +G++P+ +++ +LA + +AF
Sbjct: 332 PDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAV 391
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L +M+ +PD + Y+ +I + M E + P+ VT N ++ +
Sbjct: 392 LREMQA-SGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHC 450
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G D+ + M ES C P T N ++++ + + +E + + G+ P
Sbjct: 451 KGGRHDRAAELFEEMRES-NCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNI 509
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+ L+ YG+ Y + +E M+ + + Y+ ++ A++ G A H +
Sbjct: 510 ITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKA 569
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M A+G++ LIN + + S ++ + + +V Y ++ A I+ +
Sbjct: 570 MKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQ 629
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIM 467
++ +Y+ M C PD + +++
Sbjct: 630 FDKVPVIYEEMITSGCAPDRKARAML 655
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/362 (18%), Positives = 142/362 (39%), Gaps = 40/362 (11%)
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQP---ELARKVFNEMVEEGIEPTPELYTA 184
L++ +L+E F P +Y LL L + P L ++ ++ E +EP L++
Sbjct: 175 LRLLSLLREHDFL-PDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSD 233
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L++A+ R +L D A L + +
Sbjct: 234 LISAFARAALPDAALELLASAQAI------------------------------------ 257
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+TP + ++ G AG + E + + KP N +L + G +
Sbjct: 258 GLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKN 317
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
E+ ++ G+ P+ T+++L+ AY + ++ +++ M +S ++ ++
Sbjct: 318 AEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILA 377
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
F D GD + +M A G++ D + +I+ + + + + I
Sbjct: 378 GFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEP 437
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
+V +N +I A K +++ M+E +C P + T++IM ++ + V A+
Sbjct: 438 DVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAML 497
Query: 485 QE 486
E
Sbjct: 498 SE 499
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 35/173 (20%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
++ W + +KEQ P TY L+ + G+SG+ + A M +G++P+P
Sbjct: 487 QEHWEGVEAMLSEMKEQGLV-PNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPT 545
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMK------------TLPNC----------------- 211
+Y AL+ AY + L D A + MK +L N
Sbjct: 546 MYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFM 605
Query: 212 -----QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+PDV TY+TL+KA + +F+ + +Y++M P+ + ++ G
Sbjct: 606 RENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRSG 658
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 162/346 (46%), Gaps = 2/346 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY ++ L K G +LA + N+M + +EP +Y ++ C+ +D+A
Sbjct: 832 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 891
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M+T +P+V TYS+LI + R+ L DM ER + P+ T + ++ +
Sbjct: 892 LFKEMET-KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 950
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + E++ M++ + P + T +++++ F ++D ++ +E + P+
Sbjct: 951 VKEGKLVEAEKLYDEMVKRSI-DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 1009
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+N LI + K + ++ V M + + TYN +I+ GD + F+
Sbjct: 1010 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 1069
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M ++G+ + T+ L++G G K + + ++ + YN +I KA
Sbjct: 1070 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 1129
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ + ++ + K +PD ++ M + ++G ++ AL +E
Sbjct: 1130 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 1175
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 157/345 (45%), Gaps = 4/345 (1%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y+P T L+ + + A + ++MVE G +P Y A++ + C+ +++AF
Sbjct: 254 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 313
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+++ +P+V TY+ L+ ++ R+ L DM ++ +TPN +T + +L
Sbjct: 314 DFFKEIER-KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 372
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ K G + + + M+ + PD+ T +++++ ++D + ++ + G
Sbjct: 373 FVKNGKVLEAKELFEEMVRMSI-DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLA 431
Query: 320 ETRTFNILIGAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
+ ++N LI + K KR+ D M E M + + TYN +I+ F GD +
Sbjct: 432 DVVSYNTLINGFCKAKRVEDGMKLFRE-MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 490
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
F QM G+ D T+ L+ G + G K + K ++ ++ Y VI K
Sbjct: 491 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 550
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ E ++ + K +PD T++ M +G+ +V AL
Sbjct: 551 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 595
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 138/319 (43%), Gaps = 47/319 (14%)
Query: 96 KKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLL 154
K++ERK + V T + +W A ++ +M+K++ P TY LL
Sbjct: 317 KEIERKG-IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK--ITPNVITYSALLDAF 373
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL---PNC 211
K+G+ A+++F EMV I+P Y++L+ C + IDEA NQM L C
Sbjct: 374 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA----NQMFDLMVSKGC 429
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
DV +Y+TLI A R E L+++M +R + NTVT N ++ G+ +A
Sbjct: 430 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA-------- 481
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
G VD + ++ + FGI P+ T+NIL+G
Sbjct: 482 ----------------------------GDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 513
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
+K + E M+K + TY VI G + F + +G+K D
Sbjct: 514 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 573
Query: 392 KTFCCLINGYANAGLFHKV 410
T+ +++G GL H+V
Sbjct: 574 VTYTTMMSGLCTKGLLHEV 592
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 150/343 (43%), Gaps = 8/343 (2%)
Query: 136 EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI 195
EQ +P Y ++ L K + A +F EM +GI P Y++L++ C
Sbjct: 862 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 921
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI 255
+A L+ M PDV+T+S LI A V + E LY +M +RS+ P+ VT +
Sbjct: 922 SDASRLLSDMIE-RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 980
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
++ G+ D+ +++ M+ S C PDV T NT++ F +V+ + +
Sbjct: 981 LINGFCMHDRLDEAKQMFEFMV-SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 1039
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G+ T T+NILI + D + + M P TYN +++ G +
Sbjct: 1040 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 1099
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAV 432
FE + M+ T+ +I G AG KV L L + +V YN +
Sbjct: 1100 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAG---KVEDGWDLFCNLSLKGVKPDVVAYNTM 1156
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
IS + E + ++K MKE P+S ++ + A ++G
Sbjct: 1157 ISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 1199
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 149/342 (43%), Gaps = 39/342 (11%)
Query: 93 NLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLV 152
NL K++E K + V T + S +W A ++ + E+ P T+ L+
Sbjct: 891 NLFKEMETKG-IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI-NPDVFTFSALID 948
Query: 153 LLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQ 212
K G+ A K+++EMV+ I+P+ Y++L+ +C + +DEA M + +C
Sbjct: 949 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS-KHCF 1007
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
PDV TY+TLIK R E ++++M +R + NTVT NI++ G +AG D + +
Sbjct: 1008 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 1067
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDM---------------------------- 304
M+ P++ T NT+L G+++
Sbjct: 1068 FKEMVSDGV-PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 1126
Query: 305 ----MERWYEKFRNF---GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+E ++ F N G+ P+ +N +I + +K ++ ++ + M++ S
Sbjct: 1127 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 1186
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
YN +I A GD + ++M + G D T + N
Sbjct: 1187 CYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 1228
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 154/360 (42%), Gaps = 16/360 (4%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
A+ +F EM+K +PF P + KLL + K + ++ + +M GI Y+
Sbjct: 678 DAVALFGEMVKSRPF--PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 735
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ +CR S + A L +M L +P++ T S+L+ + R L M
Sbjct: 736 LINCFCRRSQLPLALAVLGKMMKLGY-EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 794
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
PNTVT N ++ G + ++ M+ C+PD+ T +++ +G D+
Sbjct: 795 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG-CQPDLVTYGVVVNGLCKRGDTDL 853
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
K ++P +N +I K + D ++ + M TY+++I
Sbjct: 854 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 913
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL---Q 421
+ G M + D TF LI+ + G K++ + +L ++
Sbjct: 914 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG---KLVEAEKLYDEMVKRS 970
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK-----EGM 476
I ++ Y+++I+ D L E +++++ M KHC PD T++ + + + K EGM
Sbjct: 971 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 1030
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 144/337 (42%), Gaps = 39/337 (11%)
Query: 159 QPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTY 218
Q LA + +M++ G EP +L+ +CR + + +A +++M + +PD+ Y
Sbjct: 238 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY-KPDIVAY 296
Query: 219 STLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
+ +I + R +++++ + + PN VT ++ G + + R+LS M++
Sbjct: 297 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 356
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
P+V T + +L F G+V + +E+ IDP+ T++ LI ++D
Sbjct: 357 KKI-TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC---LHD 412
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
++ +A M F+ M ++G AD ++ LI
Sbjct: 413 RID-----------------------------EANQM---FDLMVSKGCLADVVSYNTLI 440
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
NG+ A + R S+ + N YN +I +A D+ + + + +M
Sbjct: 441 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 500
Query: 459 PDSETFSIMTEAYAKEGMNDKVYAL--EQEKLQMLLE 493
PD T++I+ G +K + + +K +M L+
Sbjct: 501 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 537
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 165/421 (39%), Gaps = 60/421 (14%)
Query: 111 VAETFSDHVLKKQWFQALQVF---EMLKEQPFY--QPKEGTYMKLLVLLGKSGQPELARK 165
V+ T + + L + +FQA V E + F+ P TY LL L +G+ E A
Sbjct: 465 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 524
Query: 166 VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA- 224
+F +M + ++ YT ++ C+ ++EA+ + +L +PD+ TY+T++
Sbjct: 525 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL-SLKGLKPDIVTYTTMMSGL 583
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVT---QNIVLG----------GYGKAGMFDQMER 271
C + E +E LY M + + N T +I L GY + + D
Sbjct: 584 CTKGLLHE-VEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKD---- 638
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYE-------------------KF 312
++S CK + ++L F+ K D E+ K
Sbjct: 639 -----IKSGVCKKAL----SLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKS 689
Query: 313 RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
R F P F+ L+ A K +D + S+ E M+ L P TY+ +I F
Sbjct: 690 RPF---PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQL 746
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAV 432
+M G + + T L+NGY ++ + ++ V N +N +
Sbjct: 747 PLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTL 806
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL----EQEKL 488
I + E + RM K C+PD T+ ++ K G D + L EQ KL
Sbjct: 807 IHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKL 866
Query: 489 Q 489
+
Sbjct: 867 E 867
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 123/294 (41%), Gaps = 16/294 (5%)
Query: 191 RNSL----IDEAFVTLNQM-KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
RN L +D+A +M K+ P P + +S L+ A +F+++ +L + M
Sbjct: 668 RNGLSELKLDDAVALFGEMVKSRP--FPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG 725
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ N T +I++ + + VL M++ +P++ T++++L+ + + ++
Sbjct: 726 IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGY-EPNIVTLSSLLNGYCHSKRISEA 784
Query: 306 ERWYEKFRNFGIDPETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSS---TYNN 361
++ G P T TFN LI G + +++K S M + ++ TY
Sbjct: 785 VALVDQMFVTGYQPNTVTFNTLIHGLF----LHNKASEAMALIDRMVAKGCQPDLVTYGV 840
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
V+ GD +M ++ + +I+G ++ +
Sbjct: 841 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 900
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
I NV Y+++IS + R+ M E+ PD TFS + +A+ KEG
Sbjct: 901 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 954
>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 583
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 167/369 (45%), Gaps = 10/369 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A VF L E+ ++P TY L+ L + + + + +++ + G++P L A+
Sbjct: 40 EAQAVFNNLTEEG-HKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAM 98
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMR----FELIETLYQDM 241
+ A+ + +DEA +MK C+P TY+TLIK A R +L+E + QD
Sbjct: 99 INAFSESGKVDEAMKIFQKMKEY-GCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQD- 156
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+V PN T NI++ + ++ VL M+ S +PDV T NT+ +A G+
Sbjct: 157 --ENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGI-QPDVVTYNTMARAYAQNGE 213
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ ER K + P RT I+I Y K+ + + M++L +N+
Sbjct: 214 TERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNS 273
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+I+ + D D ++ M G+K D TF ++N +++AGL K
Sbjct: 274 LIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAG 333
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
I ++ Y+ + ++A + E + M + +P+ F+ + + G D+ +
Sbjct: 334 IEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAF 393
Query: 482 ALEQEKLQM 490
L ++ +M
Sbjct: 394 RLCEKMHEM 402
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 153/352 (43%), Gaps = 4/352 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEM-VEEGIEPTPELYTA 184
+A+++F+ +KE +P TY L+ G +G+P + K+ M +E ++P Y
Sbjct: 110 EAMKIFQKMKEYGC-KPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENVKPNDRTYNI 168
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ A+C ++EA+ L++M QPDV TY+T+ +A E E L M
Sbjct: 169 LIQAWCTKKKLEEAWNVLHKM-VASGIQPDVVTYNTMARAYAQNGETERAERLILKMPYN 227
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
V PN T I++ GY K G + R L M E P+ N+++ + + +
Sbjct: 228 IVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGV-DPNPVVFNSLIKGYLDTTDTNG 286
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
++ FGI P+ TF+ ++ A+ + + + M K Y+ + +
Sbjct: 287 VDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAK 346
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
+ G + E M G++ + F +I+G+ AG + ++ +
Sbjct: 347 GYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKMHEMGTSP 406
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
N+ Y +I +A + E + M+E+ P+ T ++ +A+ G+
Sbjct: 407 NLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLVADAWRAIGL 458
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 149/352 (42%), Gaps = 51/352 (14%)
Query: 153 LLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQ 212
L+GK G+P A+ VFN + EEG +PT
Sbjct: 32 LIGK-GKPHEAQAVFNNLTEEGHKPT---------------------------------- 56
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
+ TY+TL+ A RF+ I L + + + P+++ N ++ + ++G D+ ++
Sbjct: 57 --LITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSESGKVDEAMKI 114
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR-------NFGIDPETRTFN 325
M E CKP T NT++ F G R YE + + + P RT+N
Sbjct: 115 FQKMKEYG-CKPTTSTYNTLIKGFGIAG------RPYESMKLLEMMGQDENVKPNDRTYN 167
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
ILI A+ K+ ++ +V+ M TYN + A++ G+ + E +M
Sbjct: 168 ILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERLILKMPYN 227
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
+K + +T +I+GY G + + + +L + N +N++I + D +
Sbjct: 228 IVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGV 287
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
+ M+E +PD TFS + A++ G+ + + + ++ +E H
Sbjct: 288 DEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIH 339
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 110/267 (41%), Gaps = 2/267 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY + ++G+ E A ++ +M ++P +++ YC+ + EA
Sbjct: 195 QPDVVTYNTMARAYAQNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALR 254
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +MK L P+ +++LIK +D ++ M+E + P+ VT + ++ +
Sbjct: 255 FLYRMKEL-GVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAW 313
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
AG+ + E + + M++ A +PD+ + + + GQ E +G+ P
Sbjct: 314 SSAGLMENCEEIFNDMVK-AGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPN 372
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
F +I + D+ + E M ++ TY +I + + E
Sbjct: 373 VVIFTTIISGWCAAGKMDRAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLT 432
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLF 407
M G+ + T + + + GLF
Sbjct: 433 TMEERGVVPEMSTMQLVADAWRAIGLF 459
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
++GQP A + M + G++P ++T +++ +C +D AF +M + P++
Sbjct: 350 RAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKMHEM-GTSPNL 408
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
TY TLI +A + E L M+ER V P T +V + G+F + R+L+G
Sbjct: 409 KTYETLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLVADAWRAIGLFKEANRILNG 468
>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 152/348 (43%), Gaps = 51/348 (14%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ L K+G+ K+F+EM E GIE +YT+L++ CR I AF+ +++
Sbjct: 277 TYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAFLLFDEL 336
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
T P +TY LI E L +M + V V N ++ GY + GM
Sbjct: 337 -TEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGM 395
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D+ + ++E + DV+T NTI S F + D ++W + G+ T ++
Sbjct: 396 IDEASMIYD-VMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYT 454
Query: 326 ILIGAYGK-------KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
LI Y K KR++ +MSS +++Q P + TYN +I A+ G K
Sbjct: 455 NLIDVYCKEGNVEEAKRLFVEMSS-----KEVQ-P-NAITYNVMIYAYCKQGKVKEARKL 507
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
+ M A GM D+ T+ LI+G CI
Sbjct: 508 WANMKANGMDPDSYTYTSLIHG----------------------------------ECI- 532
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
AD++ E R++ M K +S T+++M +K G +D+ + L E
Sbjct: 533 ADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDE 580
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 164/381 (43%), Gaps = 19/381 (4%)
Query: 103 KAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPEL 162
K + W F +V + + L+VF+ + ++ E + + LV K + +L
Sbjct: 130 KFEFWEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGL-SIDERSCIVFLVAAKKRRRIDL 188
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
+ F MV+ G++ T T ++ CR ++++ + + +P+ YTY+T+I
Sbjct: 189 CLEFFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSG-KGIKPEAYTYNTII 247
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
A + F +E + + M + V N VT +++ K G + +E++ M E
Sbjct: 248 NAYLKHRDFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGI- 306
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
+ D+ +++S KG + +++ G+ P + T+ LI K
Sbjct: 307 ESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEI 366
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY- 401
+M M+ T +N +I + G ++ M +G +AD T + + +
Sbjct: 367 LMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFN 426
Query: 402 -------ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
A LF + VRL++ VS+ N + C K ++ E +R++ M
Sbjct: 427 RLKRYDEAKQWLFRMMEGGVRLST-------VSYTNLIDVYC-KEGNVEEAKRLFVEMSS 478
Query: 455 KHCRPDSETFSIMTEAYAKEG 475
K +P++ T+++M AY K+G
Sbjct: 479 KEVQPNAITYNVMIYAYCKQG 499
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 112/262 (42%), Gaps = 1/262 (0%)
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
+ + + VD FE ++ M ++ ++ + + + L K D M+
Sbjct: 138 FDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEFFRRMV 197
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
+S K V+++ ++ +G+V+ ++ ++F GI PE T+N +I AY K R +
Sbjct: 198 DSGV-KITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDF 256
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
+ +++ M+K + TY +IE G +E F++M G+++D + L
Sbjct: 257 SGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSL 316
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
I+ G + ++ + + Y A+I K ++ E + M+ K
Sbjct: 317 ISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGV 376
Query: 458 RPDSETFSIMTEAYAKEGMNDK 479
F+ + Y ++GM D+
Sbjct: 377 NITQVVFNTLINGYCRKGMIDE 398
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 148/352 (42%), Gaps = 45/352 (12%)
Query: 51 KHTSFSSESAVAAKKRLWKEGE-YPGVSETSIPGYRSKRTPIKNLKKKLE--RKAKAKAW 107
KH FS + K + K+G Y V+ T + K + +++K + R+ ++
Sbjct: 252 KHRDFSGVEKIL--KVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESD 309
Query: 108 VNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
++ S + K +A +F+ L E+ P TY L+ + K G+ A +
Sbjct: 310 IHVYTSLISWNCRKGNIKRAFLLFDELTEKGLL-PSSHTYGALIDGVCKVGEMGAAEILM 368
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
NEM +G+ T ++ L+ YCR +IDEA + + M+ Q DV+T +T I +C +
Sbjct: 369 NEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEK-KGFQADVFTCNT-IASCFN 426
Query: 228 AMR---------FELIE---------------------------TLYQDMDERSVTPNTV 251
++ F ++E L+ +M + V PN +
Sbjct: 427 RLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAI 486
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
T N+++ Y K G + ++ + M ++ PD +T +++ VD R + +
Sbjct: 487 TYNVMIYAYCKQGKVKEARKLWANM-KANGMDPDSYTYTSLIHGECIADNVDEAMRLFSE 545
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
G+D + T+ ++I K D+ + + +++ + + Y +I
Sbjct: 546 MGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEIKRKGYTIDNKVYTALI 597
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/211 (18%), Positives = 89/211 (42%), Gaps = 6/211 (2%)
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
+ + V+ + G + R ++ G+ + R+ + + A K+R D +E+ R+
Sbjct: 139 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRID---LCLEFFRR 195
Query: 350 L---QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
+ T + V+E G+ + + ++ +G+K + T+ +IN Y
Sbjct: 196 MVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRD 255
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
F V +++ K + N Y +I +K + ++E+++ M+E+ D ++
Sbjct: 256 FSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTS 315
Query: 467 MTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
+ ++G + + L E + L S H
Sbjct: 316 LISWNCRKGNIKRAFLLFDELTEKGLLPSSH 346
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 144/327 (44%), Gaps = 18/327 (5%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
++G ++ +M G+ P +YT L+ A CRN ID+A V ++M L +
Sbjct: 119 ENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDL-GLAANQ 177
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------MFDQ 268
Y Y+ +I + LYQ M V PN T N ++ Y + G +FD+
Sbjct: 178 YIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDE 237
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
+ + C + T N ++ KGQV E E+ + I+P TRTFN+L+
Sbjct: 238 ISK------RGVAC--NAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLM 289
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
DK S +E ++ + T TYN +I FS +G++ + +M G+
Sbjct: 290 DGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGIS 349
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA-CIKADDLMEMER 447
T+ L+N + + K L ++ + + Y +I CIK +++E +
Sbjct: 350 PSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKG-NMVEASK 408
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKE 474
+YK M E H +P+ ++ M Y KE
Sbjct: 409 LYKSMVEMHLQPNDVIYNTMINGYCKE 435
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 164/357 (45%), Gaps = 18/357 (5%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
Q+L F+++ + + P ++ L LL KSG + F E + + +
Sbjct: 56 QSLDSFKLMVLKG-HSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGR-TQFDVYSFGIT 113
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A+C N + + F L QM+T+ P+V+ Y+ LI+AC + + ++ MD+
Sbjct: 114 IKAFCENGNVSKGFELLAQMETM-GVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLG 172
Query: 246 VTPNTVTQNIVLGGYGKAG-------MFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
+ N I++ G+ K G ++ +M+ L G+L P+++T N++++ +
Sbjct: 173 LAANQYIYTIMINGFFKKGYKKDGFELYQKMK--LVGVL------PNLYTYNSLITEYCR 224
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
G++ + + +++ G+ T+NILIG +K K ++E M++ T+ T
Sbjct: 225 DGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRT 284
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
+N +++ + G E++ G+ T+ LI+G++ G V VR
Sbjct: 285 FNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREME 344
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
I+ + Y +++ +++DD+ + ++ MK PD T+ ++ +G
Sbjct: 345 DRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKG 401
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 109/514 (21%), Positives = 216/514 (42%), Gaps = 33/514 (6%)
Query: 6 ASASLSFSSSLLPSPLPHPHDTKTNKHRAQVPNFNLIHCSVTSTNKHTSFSSESAVAAKK 65
S+ F + +L P P+ N+ ++ NFN + +++S N+ +
Sbjct: 15 CSSPPGFGTCVLSLP-PYFSSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFN 73
Query: 66 RLW----KEGEYPGVSETS-------IPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAE- 113
RL K +YP V S IP + N L R A + + + +
Sbjct: 74 RLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKL 133
Query: 114 -------TFSDHV----LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPEL 162
TF+ + ++ + AL +F+ + + F QP TY L+ L K G
Sbjct: 134 GHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGF-QPNVVTYGTLINGLCKVGNTNA 192
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A ++ M + +P +YT+++ + C++ + EAF ++M PD++TY++LI
Sbjct: 193 AIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVG-QGISPDIFTYTSLI 251
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
+ + ++ + TL M + P+ V + V+ K G + V+ M+
Sbjct: 252 HSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGV- 310
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
+P+V T N ++ + ++D + ++ + G P ++N LI Y K + DK +
Sbjct: 311 EPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATY 370
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+ E M + + + TYN ++ +G + F +M A G D T+ L++
Sbjct: 371 LFEEMCQKELIPNTVTYNTLMHX-CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLC 429
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
+ ++ ++ + ++ Y VI +A +L ++ + K RP+
Sbjct: 430 KKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVR 489
Query: 463 TFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
T++IM + G+ D E KL M ++ +G
Sbjct: 490 TYTIMINGLCRRGLLD-----EANKLFMEMDGNG 518
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 4/169 (2%)
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
G+ + A +F+EMV G P Y LL C+ S +DEA L ++ N PD+
Sbjct: 397 GRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEG-SNMDPDIQI 455
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y+ +I A E ++ ++ + + PN T I++ G + G+ D+ ++ M
Sbjct: 456 YTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEM- 514
Query: 278 ESATCKPDVWTMNTIL-SVFANKGQVDMMERWYEKF-RNFGIDPETRTF 324
+ C PD T NTI + NK + ++ E R F D T T
Sbjct: 515 DGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTL 563
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 104/251 (41%), Gaps = 4/251 (1%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H L+ + +A++VF+ + Y P +Y L+ K + + A +F EM ++ + P
Sbjct: 324 HCLQSEMDEAVKVFDTMVHNG-YAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIP 382
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
Y L+ C + +A ++M PD+ TY L+ + L
Sbjct: 383 NTVTYNTLMHX-CHVGRLQDAIALFHEMVAHGQI-PDLATYRILLDYLCKKSHLDEAMAL 440
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
+ ++ ++ P+ IV+ G +AG + + S L S +P+V T +++
Sbjct: 441 LKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSN-LSSKGLRPNVRTYTIMINGLC 499
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+G +D + + + G P+ T+N + + + + +++ M F S
Sbjct: 500 RRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVS 559
Query: 358 TYNNVIEAFSD 368
T ++E D
Sbjct: 560 TTTLLVEMLCD 570
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 1/141 (0%)
Query: 117 DHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIE 176
D++ KK E P Y ++ + ++G+ E AR +F+ + +G+
Sbjct: 426 DYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLR 485
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
P YT ++ CR L+DEA +M C PD TY+T+ + +
Sbjct: 486 PNVRTYTIMINGLCRRGLLDEANKLFMEMDG-NGCSPDGCTYNTITQGLLQNKEALRAIQ 544
Query: 237 LYQDMDERSVTPNTVTQNIVL 257
L Q+M R + + T +++
Sbjct: 545 LLQEMLARGFSADVSTTTLLV 565
>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 169/365 (46%), Gaps = 24/365 (6%)
Query: 114 TFSDHVLKKQWFQALQ-VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE 172
T + +K++ F ++ V +++K+ K TY L+ L K+G+ A K+F+EM E
Sbjct: 264 TIINAYVKQRDFSGVEGVLKVMKKDGVVYNKV-TYTLLMELSVKNGKMSDAEKLFDEMRE 322
Query: 173 EGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE 232
GIE +YT+L++ CR + AF+ +++ T P YTY LI
Sbjct: 323 RGIESDVHVYTSLISWNCRKGNMKRAFLLFDEL-TEKGLSPSSYTYGALIDGVCKVGEMG 381
Query: 233 LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTI 292
E L +M + V V N ++ GY + GM D+ + ++E + DV+T NTI
Sbjct: 382 AAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYD-VMEQKGFQADVFTCNTI 440
Query: 293 LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK-------KRMYDKMSSVME 345
S F + D ++W + G+ T ++ LI Y K KR++ +MSS
Sbjct: 441 ASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSS--- 497
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
+ +Q P + TYN +I A+ G K M A GM D+ T+ LI+G A
Sbjct: 498 --KGVQ-P-NAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIA- 552
Query: 406 LFHKVISSVRLASKLQIA---ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
V ++RL S++ + +N Y +IS KA E +Y MK K D++
Sbjct: 553 --DNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNK 610
Query: 463 TFSIM 467
++ +
Sbjct: 611 VYTAL 615
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 174/391 (44%), Gaps = 24/391 (6%)
Query: 114 TFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE 173
F +V + + L+VF+ + ++ E + + LV K + +L ++F MV+
Sbjct: 160 VFRVYVDNGMFEEGLRVFDYMVKKGL-SIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDS 218
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
G++ T T ++ CR ++++ + + ++ +P+ YTY+T+I A V F
Sbjct: 219 GVKITVYSLTIVVEGLCRRGEVEKSKKLIKEF-SVKGIKPEAYTYNTIINAYVKQRDFSG 277
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
+E + + M + V N VT +++ K G E++ M E + DV +++
Sbjct: 278 VEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGI-ESDVHVYTSLI 336
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
S KG + +++ G+ P + T+ LI K +M M+
Sbjct: 337 SWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVN 396
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY--------ANAG 405
T +N +I+ + G ++ M +G +AD T + + + A
Sbjct: 397 ITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQW 456
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
LF + V+L++ VS+ N + C K ++ E +R++ M K +P++ T++
Sbjct: 457 LFRMMEGGVKLST-------VSYTNLIDVYC-KEGNVEEAKRLFVEMSSKGVQPNAITYN 508
Query: 466 IMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
+M AY K+G K+ E KL+ +EA+G
Sbjct: 509 VMIYAYCKQG---KIK--EARKLRANMEANG 534
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 117/274 (42%), Gaps = 40/274 (14%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A +F+ L E+ P TY L+ + K G+ A + NEM +G+ T ++ L
Sbjct: 347 RAFLLFDELTEKGL-SPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTL 405
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMR---------FELIE- 235
+ YCR ++DEA + + M+ Q DV+T +T I +C + ++ F ++E
Sbjct: 406 IDGYCRKGMVDEASMIYDVMEQ-KGFQADVFTCNT-IASCFNRLKRYDEAKQWLFRMMEG 463
Query: 236 --------------------------TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
L+ +M + V PN +T N+++ Y K G +
Sbjct: 464 GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEA 523
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
++ + M E+ PD +T +++ VD R + + G+D + T+ ++I
Sbjct: 524 RKLRANM-EANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMIS 582
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
K D+ + + M++ + + Y +I
Sbjct: 583 GLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 33/197 (16%), Positives = 80/197 (40%)
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
+ + V+ + G + R ++ G+ + R+ + + A K+R D + M
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD 217
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
T + V+E G+ + + ++ +G+K + T+ +IN Y F
Sbjct: 218 SGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSG 277
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
V +++ K + N Y ++ +K + + E+++ M+E+ D ++ +
Sbjct: 278 VEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLIS 337
Query: 470 AYAKEGMNDKVYALEQE 486
++G + + L E
Sbjct: 338 WNCRKGNMKRAFLLFDE 354
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 174/397 (43%), Gaps = 31/397 (7%)
Query: 82 PGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQ 141
P Y+ +TPIK + + T +D VL +F+++ +Q
Sbjct: 35 PEYQEIKTPIKESDVVMRLR------------TETDIVLASNYFRSIA------NSKAFQ 76
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
+ TY ++ LG+ + + + +M EGI + +L+ ++ Y R L ++A
Sbjct: 77 HTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKM 136
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+++ CQP V Y+ L+ A + RF++IE +Y +M PN T NI+L
Sbjct: 137 FYRIREF-GCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALC 195
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K D ++L M + C+PDV + T++S + G+V+ +F+ P
Sbjct: 196 KNNRVDGACKLLVEM-SNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQ-----PNV 249
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+N LI + ++ ++ ++ M + TY+ VI + S +G+ + + +
Sbjct: 250 SVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAK 309
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIK 438
M G + TF L+ GY G +V+ ++ + +++ NV YN +I
Sbjct: 310 MFVRGCSPNVYTFTSLMKGYFMRG---RVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCS 366
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ E V +M+ C P+ T+ + + +AK G
Sbjct: 367 HGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAG 403
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 152/363 (41%), Gaps = 15/363 (4%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+QP Y L+ + + + + +MVE+GI+P Y+ ++++ ++ A
Sbjct: 245 FQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELAL 304
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL--YQDMDERSVTPNTVTQNIVL 257
+M + C P+VYT+++L+K MR ++E L + M E PN V N ++
Sbjct: 305 AVWAKM-FVRGCSPNVYTFTSLMKGYF--MRGRVLEALNIWNRMAEEGFEPNVVAYNTLI 361
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
G G + V S M E C P+V T ++ FA G + + K G
Sbjct: 362 HGLCSHGKMGEAVSVSSKM-ERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGC 420
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P + ++ + M+ + S++E M P + T+N I+ G +
Sbjct: 421 IPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAIN 480
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
F QM G + KT+ +++G + + V + + N+ YN +
Sbjct: 481 LFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFC 540
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQML--LEAS 495
E ++ +M +PD+ T++ +T AY +G KV + +Q+L L A
Sbjct: 541 NVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQG---KV----KTAIQLLDKLSAG 593
Query: 496 GHW 498
G W
Sbjct: 594 GKW 596
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 54/135 (40%)
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
F T TY +IE D ++Y +QM EG+ F +IN Y GL + +
Sbjct: 75 FQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQAL 134
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
+ V YN ++ A + + +E +Y MK P+ T++I+ +A
Sbjct: 135 KMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKAL 194
Query: 472 AKEGMNDKVYALEQE 486
K D L E
Sbjct: 195 CKNNRVDGACKLLVE 209
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 78/187 (41%), Gaps = 1/187 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ + L SG+ E A +F +M + G P + Y +L + + I EA
Sbjct: 457 PNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALEL 516
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ +M+ + ++ TY+T+ + +FE L M V P+ +T N + Y
Sbjct: 517 VTEMEE-KGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYC 575
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
G ++L + P+V ++L N+ V+ + +K N GI
Sbjct: 576 MQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNA 635
Query: 322 RTFNILI 328
T+N L+
Sbjct: 636 ATWNALV 642
>gi|297801170|ref|XP_002868469.1| hypothetical protein ARALYDRAFT_330235 [Arabidopsis lyrata subsp.
lyrata]
gi|297314305|gb|EFH44728.1| hypothetical protein ARALYDRAFT_330235 [Arabidopsis lyrata subsp.
lyrata]
Length = 448
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 162/350 (46%), Gaps = 6/350 (1%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y LL + GQ ELA +V + M EE ++ E LL Y ++E++ +N+MK
Sbjct: 74 YNALLSGYLRKGQLELAVRVLDHMKEENVDKNQETCEILLNYYVSAGRLEESWRVVNEMK 133
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
+ + + Y +I+ D ++ + +++ E + + N ++ +GK G
Sbjct: 134 K-RMFRLNSFVYGKIIRIYRDNGMWKKALGIVEEIKEIGLPMDVEIYNSIIDTFGKYGEL 192
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
D+ VL M S+ KP++ T N+++ + G +DM + ++ G+ P+ R F
Sbjct: 193 DEALDVLEKMQSSSDSKPNISTWNSLIRWHCHHGALDMALELFTMMQDQGLYPDPRMFVN 252
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
LI G+ ++ + E ++ + T + Y +++ G + +E ++ ++G
Sbjct: 253 LITRLGENGNWNMIDKHFESIKCKEHKDTRAIYAALVQIIGQFGSFQDVEELVGKLKSQG 312
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+ FC N YA GL+ + + +++ I N+ N +I+A A ME
Sbjct: 313 VAPSANLFCTFANAYAQQGLYKQTVKVLKMMENEGIEPNLIMLNVLINAFGTAGKHMEAL 372
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
+Y +KE PD T+S + +A+ + +KV + +E +EASG
Sbjct: 373 SIYHHIKESGFTPDVVTYSTLMKAFTRAKKYEKVPEIFRE-----MEASG 417
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 122/291 (41%), Gaps = 36/291 (12%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
Y K++ + +G + A + E+ E G+ E+Y +++ + + +DEA L +M
Sbjct: 143 VYGKIIRIYRDNGMWKKALGIVEEIKEIGLPMDVEIYNSIIDTFGKYGELDEALDVLEKM 202
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP------NTVTQNIVLGG 259
++ + +P++ T+++LI+ ++ L+ M ++ + P N +T+ G
Sbjct: 203 QSSSDSKPNISTWNSLIRWHCHHGALDMALELFTMMQDQGLYPDPRMFVNLITRLGENGN 262
Query: 260 Y-----------------------------GKAGMFDQMERVLSGMLESATCKPDVWTMN 290
+ G+ G F +E L G L+S P
Sbjct: 263 WNMIDKHFESIKCKEHKDTRAIYAALVQIIGQFGSFQDVEE-LVGKLKSQGVAPSANLFC 321
Query: 291 TILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
T + +A +G + + N GI+P N+LI A+G + + S+ ++++
Sbjct: 322 TFANAYAQQGLYKQTVKVLKMMENEGIEPNLIMLNVLINAFGTAGKHMEALSIYHHIKES 381
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
F TY+ +++AF+ + + F +M A G AD K L N +
Sbjct: 382 GFTPDVVTYSTLMKAFTRAKKYEKVPEIFREMEASGCTADRKARQLLQNAF 432
>gi|357123530|ref|XP_003563463.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Brachypodium distachyon]
Length = 862
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 187/406 (46%), Gaps = 17/406 (4%)
Query: 86 SKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEG 145
S P ++ + LE A+ + + A + + + W +++++F+ ++ Q + +P E
Sbjct: 76 SNLAPRGSIARCLE-TARHRLTLQDFAAVYREFSRRGDWQRSVRLFKYMQRQSWCRPDEH 134
Query: 146 TYMKLLVLLGKSGQPELARK---VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTL 202
+ ++ +LG+ G P L K VF+++ + T YT+L+AAY RN+L +EA L
Sbjct: 135 IHAIVIGVLGRQG-PALLDKCLEVFHDLPAD--SRTALSYTSLIAAYARNALHEEARALL 191
Query: 203 NQMKTLPNCQPDVYTYSTLIKACVDA----MRFELIETLYQDMDER---SVTPNTVTQNI 255
+QMK P TY+T++ AC A + F+++ L+ +M +V P+ T N
Sbjct: 192 DQMKA-AGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDVSPAVRPDLTTYNT 250
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
+L + DQ E +L MLE+ PD + I+ FA G + + + + +
Sbjct: 251 LLAAAAVRSLNDQAEMLLRAMLEAGVL-PDTASYRHIVDAFARAGDLSRVAELFREMADT 309
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G P+ + L+ A+ + + +V+ M+ T++TY +++ + G +
Sbjct: 310 GHTPDPSAYLGLMEAHTRVGATAEAVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDGV 369
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
F +M + DT T+ L + + + G F +V+ + I ++ V+ A
Sbjct: 370 RELFREMRT-AVPPDTATYNVLFSVFGDGGFFKEVVELFHDMLRTGIEPDMETCEGVLVA 428
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
C + + V + ++ P ++ ++ + EA M ++ Y
Sbjct: 429 CGQGGLHEDAREVLDYITKEGMVPTAKAYTGLVEALGHAAMYEEAY 474
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 136/340 (40%), Gaps = 41/340 (12%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P +Y ++ ++G ++F EM + G P P Y L+ A+ R EA
Sbjct: 278 PDTASYRHIVDAFARAGDLSRVAELFREMADTGHTPDPSAYLGLMEAHTRVGATAEAVAV 337
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L QM+ C P TY ++L YG
Sbjct: 338 LRQMQA-DGCAPTAATY-----------------------------------RVLLDLYG 361
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV-DMMERWYEKFRNFGIDPE 320
+ G FD + + M PD T N + SVF + G +++E +++ R GI+P+
Sbjct: 362 RQGRFDGVRELFREM--RTAVPPDTATYNVLFSVFGDGGFFKEVVELFHDMLRT-GIEPD 418
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T ++ A G+ +++ V++Y+ K T+ Y ++EA + F
Sbjct: 419 METCEGVLVACGQGGLHEDAREVLDYITKEGMVPTAKAYTGLVEALGHAAMYEEAYVAFN 478
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSV-RLASKLQIAENVSFYNAVISACIKA 439
M G +T+ L N +A GLF + S R+ + I +N ++A+I A +
Sbjct: 479 MMTEIGSLPTIETYNSLANVFAKGGLFQEAESIFSRMTNSAGIQKNKDSFDALIEAYCQG 538
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
L + + Y M++ PD + + AY G+ D+
Sbjct: 539 AQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDE 578
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 114/311 (36%), Gaps = 39/311 (12%)
Query: 129 QVFEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+V E+ +E + P Y+ L+ + G A V +M +G PT Y LL
Sbjct: 298 RVAELFREMADTGHTPDPSAYLGLMEAHTRVGATAEAVAVLRQMQADGCAPTAATYRVLL 357
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
Y R D +M+T PD TY+ L D F+ + L+ DM +
Sbjct: 358 DLYGRQGRFDGVRELFREMRT--AVPPDTATYNVLFSVFGDGGFFKEVVELFHDMLRTGI 415
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLS-----GMLESATCK------------------ 283
P+ T VL G+ G+ + VL GM+ +A
Sbjct: 416 EPDMETCEGVLVACGQGGLHEDAREVLDYITKEGMVPTAKAYTGLVEALGHAAMYEEAYV 475
Query: 284 -----------PDVWTMNTILSVFANKGQVDMMERWYEKFRN-FGIDPETRTFNILIGAY 331
P + T N++ +VFA G E + + N GI +F+ LI AY
Sbjct: 476 AFNMMTEIGSLPTIETYNSLANVFAKGGLFQEAESIFSRMTNSAGIQKNKDSFDALIEAY 535
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
+ D MRK +F + V+ A+ G + FE++ +
Sbjct: 536 CQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEEIQSNMAVPSI 595
Query: 392 KTFCCLINGYA 402
+C +++ YA
Sbjct: 596 IAYCMMLSLYA 606
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 102/232 (43%), Gaps = 9/232 (3%)
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ + G + + R+ M + C+PD ++ V +G ++++ E F + D
Sbjct: 107 FSRRGDWQRSVRLFKYMQRQSWCRPDEHIHAIVIGVLGRQGPA-LLDKCLEVFHDLPADS 165
Query: 320 ETR-TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA----KH 374
T ++ LI AY + ++++ ++++ M+ T++TYN V+ A + D
Sbjct: 166 RTALSYTSLIAAYARNALHEEARALLDQMKAAGVAPTAATYNTVLAACARATDPPVPFDM 225
Query: 375 MEYTFEQMHAE---GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNA 431
+ F +M + ++ D T+ L+ A L + +R + + + + Y
Sbjct: 226 LLGLFAEMRHDVSPAVRPDLTTYNTLLAAAAVRSLNDQAEMLLRAMLEAGVLPDTASYRH 285
Query: 432 VISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
++ A +A DL + +++ M + PD + + EA+ + G + A+
Sbjct: 286 IVDAFARAGDLSRVAELFREMADTGHTPDPSAYLGLMEAHTRVGATAEAVAV 337
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 172/367 (46%), Gaps = 9/367 (2%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
LK QAL + + Q F+ + +Y L+ L K G+ A ++ + + ++P
Sbjct: 143 LKGHIHQALHFHDKVVAQGFHL-DQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNA 201
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+Y ++ C+ L+++AF +QM C PDV+TY+ LI + L+
Sbjct: 202 VMYNMIIDNMCKAKLVNDAFDLYSQMVAKRIC-PDVFTYNALISGFSAVSKLNYAIDLFN 260
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
M + ++ PN T NI++ G+ K G + + VL+ M++ KPDV T N+++ + +
Sbjct: 261 KMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDI-KPDVVTYNSLMDGYCSI 319
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
+V+ + ++ + G+ + + ++ + K +M D+ ++ E MR + TY
Sbjct: 320 NKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTY 379
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+++I+ +G + ++MH G + T+ +++ H V ++ L +
Sbjct: 380 SSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKN---HHVDKAIALLTN 436
Query: 420 LQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
L+ I ++ Y +I ++ L + + V++ + K D +++M + + +G
Sbjct: 437 LKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGF 496
Query: 477 NDKVYAL 483
DK AL
Sbjct: 497 FDKALAL 503
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 148/338 (43%), Gaps = 2/338 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
T+ L+ + G L+ +F +++++G PT + L+ C I +A + +
Sbjct: 98 TFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQA-LHFHDK 156
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
D +Y TLI R L + +D + V PN V N+++ KA +
Sbjct: 157 VVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKL 216
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+ + S M+ C PDV+T N ++S F+ +++ + K + I+P TFN
Sbjct: 217 VNDAFDLYSQMVAKRIC-PDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFN 275
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
IL+ + K+ + V+ M K TYN++++ + + + F+ M +
Sbjct: 276 ILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASG 335
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G+ A+ + + ++NG+ + + I+ +I NV Y+++I K +
Sbjct: 336 GVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYA 395
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
++ M ++ P+ T+S + +A K DK AL
Sbjct: 396 LKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIAL 433
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 133/317 (41%), Gaps = 14/317 (4%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ + A +FN+M +E I P + L+ +C+ +++A V
Sbjct: 234 PDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVV 293
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L M + +PDV TY++L+ + + ++ M V N ++ G+
Sbjct: 294 LAIMMK-DDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFC 352
Query: 262 KAGMFDQMERVLSGMLESATCK---PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
K M D+ + E C+ P+V T ++++ G++ + ++ + G
Sbjct: 353 KIKMVDEA----INLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQP 408
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P T++ ++ A K DK +++ ++ TY +I+ G + +
Sbjct: 409 PNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNV 468
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISA 435
FE + +G D + +I G+ + G F K ++ L SK++ N Y VI +
Sbjct: 469 FEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALA---LLSKMEDNGCIPNAKTYELVILS 525
Query: 436 CIKADDLMEMERVYKRM 452
+ D+ E++ + M
Sbjct: 526 LFEKDENDTAEKLLREM 542
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 101/228 (44%), Gaps = 8/228 (3%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQ---PDVYTYS 219
A+ +F+ M G+ ++YT ++ +C+ ++DEA +M+ C+ P+V TYS
Sbjct: 325 AKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMR----CRKIIPNVVTYS 380
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
+LI R L +M +R PN VT + +L K D+ +L+ L+
Sbjct: 381 SLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTN-LKD 439
Query: 280 ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
+PD++T ++ G+++ + +E G + + + ++I + K +DK
Sbjct: 440 QGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDK 499
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
+++ M + TY VI + + + E +M G+
Sbjct: 500 ALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGL 547
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 83/192 (43%), Gaps = 6/192 (3%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P + N ILS +++ GI+ + TFNILI + + + S+
Sbjct: 59 PPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSI 118
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ K + T+ T+N +I+ G + +++ A+G D ++ LING
Sbjct: 119 FAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCK 178
Query: 404 AGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
G ++ ++++L ++ + N YN +I KA + + +Y +M K PD
Sbjct: 179 VG---RITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPD 235
Query: 461 SETFSIMTEAYA 472
T++ + ++
Sbjct: 236 VFTYNALISGFS 247
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/278 (18%), Positives = 118/278 (42%), Gaps = 13/278 (4%)
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ N + N P + ++ ++ + V A +L+Q M+ + + T NI++ +
Sbjct: 47 SFNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCF 106
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ G+ + + +L+ P T NT++ KG + +++K G +
Sbjct: 107 SQLGLNSLSFSIFAKILKKGY-HPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLD 165
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT---SSTYNNVIEAFSDMGDAKHMEY 377
++ LI K ++++ ++ ++++ + YN +I+ +M AK +
Sbjct: 166 QVSYGTLINGLCK---VGRITAALQLLKRVDGKLVQPNAVMYNMIID---NMCKAKLVND 219
Query: 378 TFE---QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVIS 434
F+ QM A+ + D T+ LI+G++ + I K I NV +N ++
Sbjct: 220 AFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVD 279
Query: 435 ACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
K + + + V M + +PD T++ + + Y
Sbjct: 280 GFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYC 317
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ + LK+Q +P TY L+ L +SG+ E A+ VF +++ +G YT +
Sbjct: 429 KAIALLTNLKDQGI-RPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVM 487
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +C D+A L++M+ C P+ TY +I + + + E L ++M R
Sbjct: 488 IQGFCDKGFFDKALALLSKMED-NGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRG 546
Query: 246 V 246
+
Sbjct: 547 L 547
>gi|326527817|dbj|BAJ88981.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 491
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 152/340 (44%), Gaps = 2/340 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P Y LL L LA ++ +M ++G+ Y LL AY R +++++
Sbjct: 119 RPDAAHYNALLEGLLARAHLRLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWW 178
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +MK + D YSTL++ D+ ++ L +M E V + N ++ +
Sbjct: 179 VLGEMKRW-GIRLDTAGYSTLVRLYRDSGMWKKATDLIMEMQEVGVELDVKIYNGLIDTF 237
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
GK G ++ M KPD+ T N ++ G + R+ + G+ P+
Sbjct: 238 GKYGQLADARKMFEKM-RGQGIKPDIETWNALIRWHCRVGNMKRALRFLAAMQEEGMYPD 296
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+ F +I G++ +D++ + + MR F + + Y +++ + G + +
Sbjct: 297 PKIFITIINKLGEQGKWDELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQECVA 356
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+ AE ++ FC L N YA GL + +S ++L I N+ N +I+A A
Sbjct: 357 ALKAENLQLSPSIFCVLANAYAQQGLCEQTVSVLQLMEAEGIEPNLVMLNLLINAFSTAG 416
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+E + V++ +K+ PD T++ + +A+ + +KV
Sbjct: 417 RHLEAQAVFQHIKDSGMSPDVVTYTTLMKAFMRVKRYEKV 456
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 109/248 (43%), Gaps = 4/248 (1%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y L+ GK GQ ARK+F +M +GI+P E + AL+ +CR + A L M+
Sbjct: 230 YNGLIDTFGKYGQLADARKMFEKMRGQGIKPDIETWNALIRWHCRVGNMKRALRFLAAMQ 289
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
PD + T+I + +++ ++ L+ M R + +++ YG+ G F
Sbjct: 290 E-EGMYPDPKIFITIINKLGEQGKWDELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHF 348
Query: 267 -DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D E V + E+ P ++ + + + +A +G + + GI+P N
Sbjct: 349 RDAQECVAALKAENLQLSPSIFCV--LANAYAQQGLCEQTVSVLQLMEAEGIEPNLVMLN 406
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
+LI A+ + + +V ++++ TY +++AF + + + + +M
Sbjct: 407 LLINAFSTAGRHLEAQAVFQHIKDSGMSPDVVTYTTLMKAFMRVKRYEKVSEVYSEMERA 466
Query: 386 GMKADTKT 393
G D K
Sbjct: 467 GCTPDRKA 474
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 150/350 (42%), Gaps = 6/350 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P ++ L+ + ++G + A F +M G+ P +YT L+ YCRN ++ EA
Sbjct: 323 PDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEI 382
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
++M C DV Y+T++ L+ +M ER V P+ T ++ G+
Sbjct: 383 RDKMLE-QGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHC 441
Query: 262 KAGMFDQMERVLS--GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K G M + LS G++ KPD+ T N ++ F +++ + + + I P
Sbjct: 442 KEG---NMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFP 498
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
++ IL+ Y + + + M + T T N VI+ + GD +
Sbjct: 499 NHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFL 558
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
+M +EG+ D+ T+ LING+ K + + +V YN +++ +
Sbjct: 559 GKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQ 618
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ E E + ++M E+ PD T++ + Y + + + E LQ
Sbjct: 619 GRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQ 668
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 149/346 (43%), Gaps = 8/346 (2%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY ++ L K G+ A+ VFNEM+ G+ P Y LL CRN+ EA
Sbjct: 252 KPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKD 311
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ M PD+ ++S+LI + ++DM + P+ V I++ GY
Sbjct: 312 IFSDMLH-RGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGY 370
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ GM + + MLE C DV NTIL+ K + +++ G+ P+
Sbjct: 371 CRNGMMSEALEIRDKMLEQG-CALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPD 429
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
TF LI + K+ K S+ M + TYN +I+ F + + +
Sbjct: 430 FCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWN 489
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL---QIAENVSFYNAVISACI 437
+M + + + ++ L+NGY N G V + RL ++ I + N VI
Sbjct: 490 EMISRKIFPNHISYAILVNGYCNLGF---VSEAFRLWDEMIRKGIKPTLVTCNTVIKGYC 546
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
++ DL + + +M + PDS T++ + + K DK + L
Sbjct: 547 RSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFL 592
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 145/324 (44%), Gaps = 8/324 (2%)
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
+M ++GI Y L+ AYCR L+ EAF +N M +P ++TY+ +I
Sbjct: 210 DMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSG-KGLKPTLFTYNAVINGLCKK 268
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
R+ + ++ +M ++P+T T N +L + F + + + S ML PD+ +
Sbjct: 269 GRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGV-SPDLIS 327
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
++++ V + G +D ++ + G+ P+ + ILI Y + M + + + M
Sbjct: 328 FSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKML 387
Query: 349 KLQFPWTSSTYNNVIEAFSD---MGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
+ YN ++ + DA + F++M G+ D TF LI+G+ G
Sbjct: 388 EQGCALDVVAYNTILNGLCKKKLLADANAL---FDEMVERGVVPDFCTFTTLIHGHCKEG 444
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
K +S + ++ I ++ YN +I K ++ + ++ M + P+ +++
Sbjct: 445 NMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYA 504
Query: 466 IMTEAYAKEGMNDKVYALEQEKLQ 489
I+ Y G + + L E ++
Sbjct: 505 ILVNGYCNLGFVSEAFRLWDEMIR 528
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 131/300 (43%), Gaps = 37/300 (12%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A +F+EMVE G+ P +T L+ +C+ + +A ++L + T N +PD+ TY+ LI
Sbjct: 414 ANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKA-LSLFGIMTQKNIKPDIVTYNILI 472
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
E L+ +M R + PN ++ I++ GY G + R+ M+
Sbjct: 473 DGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGI- 531
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
KP + T NT++ + G + + + K + G+ P++ T+N LI + K
Sbjct: 532 KPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKG-------- 583
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
EYM K AF + +M +G++ D T+ ++NG+
Sbjct: 584 --EYMDK---------------AF----------FLINKMETKGLQPDVVTYNVILNGFC 616
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
G + +R + I + S Y +I+ + D+L E R + M ++ PD +
Sbjct: 617 RQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPDDD 676
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 119/281 (42%), Gaps = 5/281 (1%)
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
C D + LI++ V A + ++ + + + N +LGG K G D
Sbjct: 111 CGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAW 170
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
V + + S + +V+T+N +++ ++D ++ + GI + T+N LI A
Sbjct: 171 EVYNEIARSGI-ELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINA 229
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
Y ++ + + VM M T TYN VI G + F +M + G+ D
Sbjct: 230 YCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPD 289
Query: 391 TKTFCCLI--NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
T T+ L+ + N L K I S L ++ ++ ++++I + L +
Sbjct: 290 TTTYNTLLVESCRNNNFLEAKDIFSDMLHRG--VSPDLISFSSLIGVSSRNGHLDQALMY 347
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
++ MK PD+ ++I+ Y + GM + + + L+
Sbjct: 348 FRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLE 388
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 149/337 (44%), Gaps = 2/337 (0%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+QP T+ L+ L G+ A +F++M+ EG +P Y L+ C++ + EAF
Sbjct: 111 HQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAF 170
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
++M T P++ TY++LI ++ + TL +M + + P+ T N V+
Sbjct: 171 NIFSEMIT-KGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDA 229
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K GM + V+ M+ +P+V T N ++ + +VD+ + ++ +
Sbjct: 230 LCKEGMVAEAHDVVDMMIHRGV-EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 288
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
++N LI Y K + DK + E M + + + TYN +I +G + F
Sbjct: 289 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 348
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
+M A G D T+ L + K ++ ++ ++ Y ++ +A
Sbjct: 349 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 408
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+L + ++ + K +P+ T++IM K+G+
Sbjct: 409 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGL 445
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 155/380 (40%), Gaps = 25/380 (6%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
AL F ML P P + KLL + K + +M GI P
Sbjct: 564 DALSSFNRMLHMHP--PPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 621
Query: 185 LLAAYCRNSLIDEAFVTLNQM------------KTLPN--CQ-------PDVYTYSTLIK 223
L+ ++C + AF L ++ TL N C+ PD++TY++LI
Sbjct: 622 LINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIH 681
Query: 224 ACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK 283
A + ++ + TL +M + PN V + V+ K GM V+ M++ +
Sbjct: 682 ALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGV-E 740
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
PDV T ++ + ++D + ++ + G P R++NILI Y + + DK +
Sbjct: 741 PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 800
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+E M + TYN +I +G +H F +M A G D T+ L++
Sbjct: 801 LEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCK 860
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
+ + ++ + ++ YN I +A +L ++ + K +PD T
Sbjct: 861 NHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRT 920
Query: 464 FSIMTEAYAKEGMNDKVYAL 483
++IM K G+ D+ L
Sbjct: 921 YNIMIHGLCKRGLLDEANKL 940
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 113/291 (38%), Gaps = 35/291 (12%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L K G A V + M+ G+EP Y AL+ +C + +D A + M +C
Sbjct: 230 LCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM-VHKDCVA 288
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------MF 266
+V +Y+TLI + L+++M + +TPNTVT N ++ G G +F
Sbjct: 289 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 348
Query: 267 DQME-----------RVLSGML----------------ESATCKPDVWTMNTILSVFANK 299
+M R LS L E + PD+ TIL
Sbjct: 349 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 408
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G+++ + + G+ P T+NI+I K+ + + S + M K TY
Sbjct: 409 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTY 468
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
N + F +A E+M A G D T L+ ++ GL V
Sbjct: 469 NLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSV 519
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 145/360 (40%), Gaps = 7/360 (1%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+AL F ML +QP P + +LL + K+ + +M GI P
Sbjct: 28 EALSTFNRMLHKQP--PPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDE 243
++ + C + +D AF L ++ L + QPD T++TLI+ CV+ E + L+ M
Sbjct: 86 VINSLCHLNRVDFAFSALAKILKLGH-QPDATTFTTLIRGLCVEGKIGEALH-LFDKMIG 143
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
PN VT ++ G K + + S M+ P++ T N+++ +
Sbjct: 144 EGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGI-SPNIVTYNSLIHGLCKLCEWK 202
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ + + I P+ T N ++ A K+ M + V++ M TYN ++
Sbjct: 203 HVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 262
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
+ + F+ M + A+ ++ LINGY K + S+ ++
Sbjct: 263 DGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELT 322
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
N YN +I L + ++ M + PD T+ +++ K DK AL
Sbjct: 323 PNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMAL 382
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/390 (20%), Positives = 154/390 (39%), Gaps = 38/390 (9%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F+ + + F QP TY L+ L K Q A +F+EM+ +GI P Y +L
Sbjct: 133 EALHLFDKMIGEGF-QPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 191
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDER 244
+ C+ +N+M PDV+T +T++ A C + M E + M R
Sbjct: 192 IHGLCKLCEWKHVTTLMNEMVD-SKIMPDVFTLNTVVDALCKEGMVAE-AHDVVDMMIHR 249
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM--------------LESATCK------- 283
V PN VT N ++ G+ D +V M L + CK
Sbjct: 250 GVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKA 309
Query: 284 -------------PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
P+ T NT++ + G++ + + G P+ T+ L
Sbjct: 310 MYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDY 369
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
K R DK ++++ + + Y +++ G+ + F + ++G++ +
Sbjct: 370 LCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPN 429
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
T+ +I+G GL + +K + N YN + ++ ++ + + +
Sbjct: 430 VWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLE 489
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
M + D T +++ + +G++ V
Sbjct: 490 EMLARGFSVDVSTTTLLVGMLSDDGLDQSV 519
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/397 (19%), Positives = 162/397 (40%), Gaps = 40/397 (10%)
Query: 113 ETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE 172
T SD++ K + E + P Y +L + ++G+ E AR +F+ +
Sbjct: 364 RTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSS 423
Query: 173 EGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV---DAM 229
+G++P Y ++ C+ L+ EA ++M C P+ TY+ + + + +A+
Sbjct: 424 KGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNK-NGCSPNDCTYNLITRGFLRNNEAL 482
Query: 230 R-FELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
R EL+E +M R + + T +++G G+ ++++L S++ +P
Sbjct: 483 RTIELLE----EMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCK--PSSSSRPSGTQ 536
Query: 289 MNTILSVFANK------------GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
M ++ +F + +D + + + P T F L+ + K +
Sbjct: 537 MRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKH 596
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
Y + S+ M P T N +I +F + + ++ G + D T+
Sbjct: 597 YSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGT 656
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
L+NG K+I+ I+ ++ YN++I A + + + M
Sbjct: 657 LMNGLC------KMITK-------GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK 703
Query: 457 CRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
P+ FS + +A KEGM A+ + + M+++
Sbjct: 704 IMPNVVVFSTVVDALCKEGM----IAIAHDVVDMMIK 736
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 114/294 (38%), Gaps = 6/294 (2%)
Query: 195 IDEAFVTLNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVT 252
+DEA T N+M K P P ++ L+ + + +L + MD + P+ T
Sbjct: 26 LDEALSTFNRMLHKQPP---PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYT 82
Query: 253 QNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF 312
IV+ D L+ +L+ +PD T T++ +G++ ++K
Sbjct: 83 LAIVINSLCHLNRVDFAFSALAKILKLGH-QPDATTFTTLIRGLCVEGKIGEALHLFDKM 141
Query: 313 RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
G P T+ LI K R + ++ M TYN++I + +
Sbjct: 142 IGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEW 201
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAV 432
KH+ +M + D T +++ G+ + V + + NV YNA+
Sbjct: 202 KHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNAL 261
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ +++ +V+ M K C + +++ + Y K DK L +E
Sbjct: 262 MDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEE 315
>gi|413918448|gb|AFW58380.1| hypothetical protein ZEAMMB73_073366 [Zea mays]
Length = 414
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 157/372 (42%), Gaps = 44/372 (11%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A+ +FE + Y P ++ ++ + + G + A ++ M E G P L+
Sbjct: 65 AVALFESWIQDGLYSPDVWSFNVVIKGVCRVGNLQKALELVERMTEFGCSPDTITQNILV 124
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
CR +++ L +++ C P+V TY+++I A R + ++Y DM +
Sbjct: 125 DGLCRVKQVNKGHEVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMKDAFSVYNDMLQSGT 184
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PNTVT N+++ GYGKA + R+ ++ +C PDV T N+++ + GQ+D
Sbjct: 185 RPNTVTYNVLINGYGKALDMESAVRMYWQLILH-SCPPDVVTFNSLIDGYCRCGQLDDAM 243
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYG-KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
R + + I P TF+I+I + + R + +S + E + + YN +I+
Sbjct: 244 RIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEALSLLRELNMRADIVPQTFIYNPIIDI 303
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
G M +G D T+ LI G+ G +I E
Sbjct: 304 LCKGGKVDEANLIVTDMEEKGCHPDKYTYTILIIGHCMKG---------------RIPEA 348
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
V+ ++ +M E CRPD+ T + K GM ++V+
Sbjct: 349 VTLFH--------------------KMVETGCRPDNITINSFISCVLKAGMPNEVH---- 384
Query: 486 EKLQMLLEASGH 497
Q++L ASGH
Sbjct: 385 ---QIMLIASGH 393
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 110/251 (43%), Gaps = 6/251 (2%)
Query: 96 KKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLL 154
++L+R V T S + + A V+ +ML Q +P TY L+
Sbjct: 141 RRLQRDGVCMPNVVTYTSVISGYCKAGRMKDAFSVYNDML--QSGTRPNTVTYNVLINGY 198
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
GK+ E A +++ +++ P + +L+ YCR +D+A +M + QP+
Sbjct: 199 GKALDMESAVRMYWQLILHSCPPDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQ-HHIQPN 257
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERS-VTPNTVTQNIVLGGYGKAGMFDQMERVL 273
VYT+S +I + R +L ++++ R+ + P T N ++ K G D+ ++
Sbjct: 258 VYTFSIIIHSLCTQNRSAEALSLLRELNMRADIVPQTFIYNPIIDILCKGGKVDEANLIV 317
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
+ M E C PD +T ++ KG++ + K G P+ T N I K
Sbjct: 318 TDM-EEKGCHPDKYTYTILIIGHCMKGRIPEAVTLFHKMVETGCRPDNITINSFISCVLK 376
Query: 334 KRMYDKMSSVM 344
M +++ +M
Sbjct: 377 AGMPNEVHQIM 387
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 105/250 (42%), Gaps = 8/250 (3%)
Query: 91 IKNLKKKLERKAKAKAWVNTVAETFSDHVLK------KQWFQALQVFEMLKEQPFYQPKE 144
+ NL+K LE + + +T + ++L KQ + +V L+ P
Sbjct: 95 VGNLQKALELVERMTEF-GCSPDTITQNILVDGLCRVKQVNKGHEVLRRLQRDGVCMPNV 153
Query: 145 GTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQ 204
TY ++ K+G+ + A V+N+M++ G P Y L+ Y + +L E+ V +
Sbjct: 154 VTYTSVISGYCKAGRMKDAFSVYNDMLQSGTRPNTVTYNVLINGYGK-ALDMESAVRMYW 212
Query: 205 MKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG 264
L +C PDV T+++LI + + ++ +M + + PN T +I++
Sbjct: 213 QLILHSCPPDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQN 272
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
+ +L + A P + N I+ + G+VD G P+ T+
Sbjct: 273 RSAEALSLLRELNMRADIVPQTFIYNPIIDILCKGGKVDEANLIVTDMEEKGCHPDKYTY 332
Query: 325 NILIGAYGKK 334
ILI + K
Sbjct: 333 TILIIGHCMK 342
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 79/196 (40%), Gaps = 10/196 (5%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY-GKKRMYDKMSS 342
PD + + N G +D K FG E +N L+ R D ++
Sbjct: 9 PDAGFFSFVAGSCTNAGLLDAAANLLTKGSWFGCRIEWYAYNNLLNTLIAHGRAQDAVAL 68
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+++ + ++N VI+ +G+ + E+M G DT T L++G
Sbjct: 69 FESWIQDGLYSPDVWSFNVVIKGVCRVGNLQKALELVERMTEFGCSPDTITQNILVDGLC 128
Query: 403 -----NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
N G H+V+ RL NV Y +VIS KA + + VY M +
Sbjct: 129 RVKQVNKG--HEVLR--RLQRDGVCMPNVVTYTSVISGYCKAGRMKDAFSVYNDMLQSGT 184
Query: 458 RPDSETFSIMTEAYAK 473
RP++ T++++ Y K
Sbjct: 185 RPNTVTYNVLINGYGK 200
>gi|413917008|gb|AFW56940.1| plastid transcriptionally active 12-like protein [Zea mays]
Length = 600
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 168/355 (47%), Gaps = 8/355 (2%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K+W ++ E L+ Q ++ E ++ L+ GK G A +V M ++G +P+
Sbjct: 118 KKWNIVSEILEWLRTQHWWDFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYQPSVIS 177
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
T L+ AY R +A +M+T QP TY ++K+ V+ +++ E +++D+
Sbjct: 178 QTGLMEAYGRGKQYRKAEAVFRRMQT-SGPQPSPVTYQIILKSLVEGDKYKEAEAIFEDL 236
Query: 242 ---DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
S P+ ++++ Y KAG + Q ++ + M E V T N+++S
Sbjct: 237 LNEKRTSFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLSTV-TFNSLMSFETE 295
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
+V + Y++ + G+ P+ ++++LI AYGK R ++ +V E M T +
Sbjct: 296 YKEVSNI---YDQMQRAGLKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKS 352
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN +++AF+ G + F M ++ D ++ ++ Y NA + R
Sbjct: 353 YNILLDAFAISGLVEEANTVFRAMRRHRVEPDLCSYTTMVLAYVNASEMNGAEKFFRRIK 412
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ + NV Y ++ K ++L ++ RVY+RM+ + P+ ++ + +A +
Sbjct: 413 EDGLKPNVVVYGTLMKGYSKLNNLEKVMRVYERMRIQGVEPNQTIYTTIMDAQGR 467
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 86/200 (43%), Gaps = 6/200 (3%)
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
+++ + G ER + G P + L+ AYG+ + Y K +V M+
Sbjct: 146 LVTAYGKLGDFSRAERVLKYMNKKGYQPSVISQTGLMEAYGRGKQYRKAEAVFRRMQTSG 205
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE---GMKADTKTFCCLINGYANAGLFH 408
+ TY ++++ + K E FE + E K D K F +I Y AG +
Sbjct: 206 PQPSPVTYQIILKSLVEGDKYKEAEAIFEDLLNEKRTSFKPDQKMFHMMIYMYKKAGDYA 265
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ S+ I + +N+++S + E+ +Y +M+ +PD ++S++
Sbjct: 266 QARKLFAQMSERGIPLSTVTFNSLMSF---ETEYKEVSNIYDQMQRAGLKPDVVSYSLLI 322
Query: 469 EAYAKEGMNDKVYALEQEKL 488
+AY K ++ A+ +E L
Sbjct: 323 KAYGKARREEEALAVFEEML 342
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 151/360 (41%), Gaps = 13/360 (3%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL + ++E +P Y ++ L K G+ A+ +F+EM E+GI P Y ++
Sbjct: 231 ALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMI 290
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+C + EA L +M PDV T+S LI A V +F E LY +M R +
Sbjct: 291 NGFCSSGRWSEAQRLLREMFE-RKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGI 349
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PNT+T N ++ G+ K D ER+ ++ + C PDV T + ++ + +VD
Sbjct: 350 IPNTITYNSMIDGFSKQNRLDAAERMFY-LMATKGCSPDVITFSILIDGYCGAKRVDDGM 408
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ + G+ T T+ LI + + + +++ M T N +++
Sbjct: 409 KLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGL 468
Query: 367 SDMGDAKHMEYTFEQMHAEGM-----------KADTKTFCCLINGYANAGLFHKVISSVR 415
+ G K F+ M M + D +T+ LI G N G F +
Sbjct: 469 CNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYE 528
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + YN+VI K L E +++ M K PD TF+ + Y K G
Sbjct: 529 EMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVG 588
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 161/385 (41%), Gaps = 47/385 (12%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P + L+ L + G+ A + + MVE+G++P Y ++ C+ A
Sbjct: 174 KPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALN 233
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +M+ + +P+V YS +I R + L+ +M E+ ++PN T N ++ G+
Sbjct: 234 LLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGF 293
Query: 261 GKAGMFDQMERVLSGMLE--------------SATCK--------------------PDV 286
+G + + +R+L M E +A K P+
Sbjct: 294 CSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNT 353
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY-GKKRMYDKMSSVME 345
T N+++ F+ + ++D ER + G P+ TF+ILI Y G KR+ D M + E
Sbjct: 354 ITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHE 413
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
R+ + TY +I F +G+ ++M + G+ + T L++G N G
Sbjct: 414 MSRR-GLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNG 472
Query: 406 LFHKVISSVRLASKLQ-----------IAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
+ ++ K + + +V YN +I I E E +Y+ M
Sbjct: 473 KLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPH 532
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDK 479
+ PD+ T++ + + K+ D+
Sbjct: 533 RGLVPDTITYNSVIDGLCKQSRLDE 557
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 159/401 (39%), Gaps = 74/401 (18%)
Query: 67 LWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWV--NTVAETFSDHVLKKQW 124
LWK+G ++T +NL +++ K + N + F +W
Sbjct: 258 LWKDG---------------RQTDAQNLFSEMQEKGISPNLFTYNCMINGFCS---SGRW 299
Query: 125 FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+A ++ + E+ P T+ L+ L K G+ A +++NEM+ GI P Y +
Sbjct: 300 SEAQRLLREMFERKM-SPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNS 358
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
++ + + + +D A M T C PDV T+S LI A R + L +M R
Sbjct: 359 MIDGFSKQNRLDAAERMFYLMAT-KGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRR 417
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC---------------------- 282
+ NT+T ++ G+ + G + +L M+ S C
Sbjct: 418 GLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDA 477
Query: 283 -----------------------KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+PDV T N ++ N+G+ E YE+ + G+ P
Sbjct: 478 LEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVP 537
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+T T+N +I K+ D+ + + + M F T+ +I + +G F
Sbjct: 538 DTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVF 597
Query: 380 EQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISS 413
+M G+ A+ T+ LI+G+ G +F ++ISS
Sbjct: 598 CEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISS 638
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 163/411 (39%), Gaps = 36/411 (8%)
Query: 77 SETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLK--------KQWFQAL 128
S +S+P R T ++++ L +K+ KA F LK K A+
Sbjct: 10 SSSSVPAARLFCT--RSIRHTLAKKSSGKAG------GFGGERLKLQSGFHEIKGLDDAI 61
Query: 129 QVFE-MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
+F M++ +P P + KLL ++ + +P++ + +M I +T L+
Sbjct: 62 DLFGYMVRSRPL--PCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIK 119
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSV 246
+C S + A T ++ L P + T+STL+ CV+ E + +Q
Sbjct: 120 CFCSCSKLPFALSTFGKITKL-GFHPSLVTFSTLLHGLCVEDRVSEALHFFHQ-----IC 173
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ----V 302
PN + ++ G + G + +L M+E +P+ T TI+ G +
Sbjct: 174 KPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGL-QPNQITYGTIVDGMCKMGDTVSAL 232
Query: 303 DMMERWYEKFRNFGIDPETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+++ + E R I P ++ +I G + R D + E K P TYN
Sbjct: 233 NLLRKMEEVSR---IKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISP-NLFTYNC 288
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+I F G + +M M D TF LIN G F +
Sbjct: 289 MINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRG 348
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
I N YN++I K + L ER++ M K C PD TFSI+ + Y
Sbjct: 349 IIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYC 399
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/195 (16%), Positives = 82/195 (42%), Gaps = 11/195 (5%)
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
++++ ++ F + ++ + K G P TF+ L+ + D++S +
Sbjct: 110 NIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVE---DRVSEAL 166
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
+ ++ P + + ++ G ++M +G++ + T+ +++G
Sbjct: 167 HFFHQICKPNVIA-FTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 225
Query: 405 GLFHKVISSVRLASKLQ----IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
G +S++ L K++ I NV Y+A+I K + + ++ M+EK P+
Sbjct: 226 G---DTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPN 282
Query: 461 SETFSIMTEAYAKEG 475
T++ M + G
Sbjct: 283 LFTYNCMINGFCSSG 297
>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
Length = 586
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 159/385 (41%), Gaps = 40/385 (10%)
Query: 127 ALQVFEMLKEQPF-YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE-GIEPTPELYTA 184
AL VF L P P + +++V+L +SG+ A ++F++M G P +
Sbjct: 129 ALAVFTALHCSPLSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSF 188
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQ-------------------------------- 212
L+++ +L+D + L++ C+
Sbjct: 189 LVSSCTCANLLDASATLLSKASEF-GCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQD 247
Query: 213 ----PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
PDV++++ +IK + + L + M+E +P+TVT NI++ G + +
Sbjct: 248 RVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSR 307
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
VL + C P+V T +++S + G+++ Y GI P T T+N+LI
Sbjct: 308 GHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLI 367
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
YGK V + M +L+ P T++++I+ + G + M ++
Sbjct: 368 NGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQ 427
Query: 389 ADTKTFCCLINGYANAGLFHKVISSV-RLASKLQIAENVSFYNAVISACIKADDLMEMER 447
+ TF +I+ + I + L + IA YN VI K + E
Sbjct: 428 PNVYTFSIIIHSLCKQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANL 487
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYA 472
+ K M+EK CRPD T++I+ Y
Sbjct: 488 IRKGMEEKGCRPDKYTYTILIIGYC 512
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 150/368 (40%), Gaps = 53/368 (14%)
Query: 94 LKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVL 153
L K E + +A+ + S + + + + +FE + Y P ++ ++
Sbjct: 206 LSKASEFGCRVEAYAYN--KLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKG 263
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
+ + GQ + A ++ M E G P + ++ CR + + L +++ C P
Sbjct: 264 VCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMP 323
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------MF 266
+V T++++I A + E +Y DM + PNTVT N+++ GYGK G ++
Sbjct: 324 NVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVY 383
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
QM R+ C PDV T ++++ + GQ+D R + I P TF+I
Sbjct: 384 QQMTRL--------RCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSI 435
Query: 327 LIGAYGKKRMYDKMSSVM-EYMRKLQFPWTSSTYNNVIEAFSDMGDA-------KHME-- 376
+I + K+ D+ ++ E + + YN VI+ G K ME
Sbjct: 436 IIHSLCKQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEK 495
Query: 377 --------YT------------------FEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
YT F +M G D+ T C I+ AG+ ++V
Sbjct: 496 GCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEV 555
Query: 411 ISSVRLAS 418
+RLAS
Sbjct: 556 DHVMRLAS 563
>gi|168062855|ref|XP_001783392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665090|gb|EDQ51786.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 540
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 139/306 (45%), Gaps = 2/306 (0%)
Query: 172 EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRF 231
++G EP LY A R + +++M NC PD+ Y+ +IK ++ RF
Sbjct: 17 QDGFEPHFHLYVAFAHCLMRVQKWVALEILVDEMIG-KNCPPDIKFYALVIKEAINTGRF 75
Query: 232 ELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNT 291
+ + + M P+ V NI++ YGK G F Q + S L+ PD T
Sbjct: 76 QTAQHWFSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKYFS-QLKDEGLLPDSGTYCA 134
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
+LS G +D ++ R GI P+ ++ILI +GK ++ ++ ++
Sbjct: 135 VLSACRKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAATFRELQMSG 194
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
+ S YN +I AF+ +G F++ D F +I YA A + + +
Sbjct: 195 YLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMADQAL 254
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
++L ++ + N Y +V++A ++A+ M ++++ M+E +CR T+ M Y
Sbjct: 255 HVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYITMLNVY 314
Query: 472 AKEGMN 477
+K G +
Sbjct: 315 SKAGFH 320
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 147/331 (44%), Gaps = 19/331 (5%)
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
+G+ + A+ F++M G P +Y L+ Y + +A +Q+K PD
Sbjct: 72 TGRFQTAQHWFSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKYFSQLKD-EGLLPDSG 130
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM-----ER 271
TY ++ AC + ++M E + P+ V +I++ +GKAG + E
Sbjct: 131 TYCAVLSACRKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAATFREL 190
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY-EKFRNFGIDPETRTFNILIGA 330
+SG L PD NT++ FA G VD + E R+F +D + F +I
Sbjct: 191 QMSGYL------PDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLD-DPVIFYTMIQV 243
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
Y K RM D+ V++ M+++ Y +V+ AF FE+M +
Sbjct: 244 YAKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFG 303
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIA--ENVSFYNAVISACIKADDLMEMERV 448
T+ ++N Y+ AG FH + LA Q+ NV Y+ +I K L E R+
Sbjct: 304 ESTYITMLNVYSKAG-FHSAAEEL-LAKMRQLGFRRNVVAYSTLIDMYGKVGKLQEATRL 361
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEG-MND 478
+ MK++ C+ + ++ M + Y K G +ND
Sbjct: 362 FSTMKQQGCKGNLIVYNTMLDMYGKAGRIND 392
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 145/337 (43%), Gaps = 8/337 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P Y L++ GK G A K F+++ +EG+ P Y A+L+A + ID+ T
Sbjct: 92 PDIVIYNILILEYGKRGNFSQAMKYFSQLKDEGLLPDSGTYCAVLSACRKVGNIDKGNET 151
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L +M+ +PD YS LI A R E ++++ P++V N ++ +
Sbjct: 152 LKEMRE-AGIKPDQVAYSILIDMFGKAGRHEDAAATFRELQMSGYLPDSVAYNTLIHAFA 210
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K GM DQ V + + C D T++ V+A D + + G+ P
Sbjct: 211 KVGMVDQATLVFKEA-QRSFCLDDPVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPNE 269
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+ ++ A+ + + E M++ + STY ++ +S G E +
Sbjct: 270 LGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLAK 329
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIK 438
M G + + + LI+ Y G K+ + RL S ++ N+ YN ++ K
Sbjct: 330 MRQLGFRRNVVAYSTLIDMYGKVG---KLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGK 386
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
A + + ER+ +K+ PD+ T++ + AY + G
Sbjct: 387 AGRINDAERLMAELKDSKLVPDTVTYTTLINAYNRLG 423
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 3/245 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QAL V +++KE QP E Y +L ++ QP A K+F EM E Y +
Sbjct: 252 QALHVLKLMKEIGL-QPNELGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYITM 310
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L Y + A L +M+ L + +V YSTLI + + L+ M ++
Sbjct: 311 LNVYSKAGFHSAAEELLAKMRQL-GFRRNVVAYSTLIDMYGKVGKLQEATRLFSTMKQQG 369
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
N + N +L YGKAG + ER+++ + +S PD T T+++ + G+ +
Sbjct: 370 CKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLV-PDTVTYTTLINAYNRLGRFEEC 428
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
R +E+ R G+ + I+I YGK R Y K++ ++E M K + V+E
Sbjct: 429 IRVFEQHRADGLKLDRILVAIMINVYGKARQYSKLAELLEVMPKSGIQPDTRILKTVVEI 488
Query: 366 FSDMG 370
+ D G
Sbjct: 489 YEDGG 493
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 159/376 (42%), Gaps = 25/376 (6%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QA++ F LK++ P GTY +L K G + + EM E GI+P Y+ L
Sbjct: 112 QAMKYFSQLKDEGLL-PDSGTYCAVLSACRKVGNIDKGNETLKEMREAGIKPDQVAYSIL 170
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + + ++A T +++ + PD Y+TLI A + ++++
Sbjct: 171 IDMFGKAGRHEDAAATFRELQ-MSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSF 229
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF--ANK--GQ 301
+ V ++ Y KA M DQ VL M E +P+ ++L+ F AN+ G
Sbjct: 230 CLDDPVIFYTMIQVYAKARMADQALHVLKLMKEIGL-QPNELGYGSVLNAFMRANQPMGA 288
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ + E E FG T+ ++ Y K + ++ MR+L F Y+
Sbjct: 289 IKLFEEMQESNCRFG----ESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYST 344
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL- 420
+I+ + +G + F M +G K + + +++ Y AG ++ + RL ++L
Sbjct: 345 LIDMYGKVGKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAG---RINDAERLMAELK 401
Query: 421 --QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
++ + Y +I+A + E RV+++ + + D +IM Y K
Sbjct: 402 DSKLVPDTVTYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAIMINVYGK----- 456
Query: 479 KVYALEQEKLQMLLEA 494
A + KL LLE
Sbjct: 457 ---ARQYSKLAELLEV 469
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 138/347 (39%), Gaps = 4/347 (1%)
Query: 132 EMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
E LKE + +P + Y L+ + GK+G+ E A F E+ G P Y L+ A+
Sbjct: 150 ETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAATFRELQMSGYLPDSVAYNTLIHAF 209
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
+ ++D+A + + + C D + T+I+ A + + + M E + PN
Sbjct: 210 AKVGMVDQATLVFKEAQR-SFCLDDPVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPN 268
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
+ VL + +A ++ M ES C+ T T+L+V++ G E
Sbjct: 269 ELGYGSVLNAFMRANQPMGAIKLFEEMQES-NCRFGESTYITMLNVYSKAGFHSAAEELL 327
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
K R G ++ LI YGK + + + M++ YN +++ +
Sbjct: 328 AKMRQLGFRRNVVAYSTLIDMYGKVGKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKA 387
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFY 429
G E ++ + DT T+ LIN Y G F + I + +
Sbjct: 388 GRINDAERLMAELKDSKLVPDTVTYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILV 447
Query: 430 NAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+I+ KA ++ + + M + +PD+ + E Y GM
Sbjct: 448 AIMINVYGKARQYSKLAELLEVMPKSGIQPDTRILKTVVEIYEDGGM 494
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 162/356 (45%), Gaps = 7/356 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
QW +A V + E + P TY L+ L K G+ A + N MVE+G EP+ Y
Sbjct: 299 QWKEANTVLNAMAEHGIH-PDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTY 357
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM- 241
LL+ C+ L+ +AF L M + DV TY+TL+K D + + L+ M
Sbjct: 358 NVLLSGLCKEGLVIDAFKILRMMIEKGK-KADVVTYNTLMKGLCDKGKVDEALKLFNSMF 416
Query: 242 -DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
+E + PN T N+++GG K G + ++ M++ +C ++ T N +L G
Sbjct: 417 DNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCG-NLVTYNMLLGGCLKAG 475
Query: 301 QV-DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
++ + ME W ++ + G P + T++ILI + K RM + + MR Y
Sbjct: 476 KIKEAMELW-KQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDY 534
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
N ++ + G + + F++M + D +F +I+G AG F V +
Sbjct: 535 NTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVE 594
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + + ++ +I+ K +L E + +RM PD+ + + + + +G
Sbjct: 595 MGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKG 650
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 177/398 (44%), Gaps = 10/398 (2%)
Query: 98 LERKAKAKAWVNTV-AETFSDHVLKKQWF-QALQVFEMLKEQPFYQPKEGTYMKLLVLLG 155
LE +A A + N+V T D + K +A+++ E +K++ F Y L+
Sbjct: 203 LEMEA-AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGF-DADVVLYGTLISGFC 260
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
+G + +++F+EM+ +GI Y+ L+ CR EA LN M PDV
Sbjct: 261 NNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAE-HGIHPDV 319
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
TY+ LI R L M E+ P+ VT N++L G K G+ ++L
Sbjct: 320 VTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRM 379
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVD-MMERWYEKFRNFG-IDPETRTFNILIGAYGK 333
M+E K DV T NT++ +KG+VD ++ + F N ++P TFN+LIG K
Sbjct: 380 MIEKGK-KADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCK 438
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+ K + M K TYN ++ G K ++Q+ G ++ T
Sbjct: 439 EGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFT 498
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSF-YNAVISACIKADDLMEMERVYKRM 452
+ LI+G+ + + + + + F YN ++++ K L + + +++ M
Sbjct: 499 YSILIDGFCKMRMLN-IAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEM 557
Query: 453 KEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
+C PD +F+ M + K G V L+ + ++M
Sbjct: 558 GNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEM 595
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 138/336 (41%), Gaps = 4/336 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P G+ L+ + +P+L V +++ G + +L CRN + EA
Sbjct: 107 PSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGL 166
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ +M + PD+ +Y+TLI A + + L +M+ PN+VT ++ G
Sbjct: 167 IREMGR-KSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLC 225
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G D+ +L M + DV T++S F N G +D + +++ GI
Sbjct: 226 KDGRMDEAMELLEAMKKKGF-DADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANV 284
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T++ L+ + + + ++V+ M + TY +I+ G A H
Sbjct: 285 VTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNL 344
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M +G + T+ L++G GL +R+ + +V YN ++
Sbjct: 345 MVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGK 404
Query: 442 LMEMERVYKRM--KEKHCRPDSETFSIMTEAYAKEG 475
+ E +++ M E P+ TF+++ KEG
Sbjct: 405 VDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEG 440
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 129/303 (42%), Gaps = 7/303 (2%)
Query: 92 KNLKKKLERKAKAKAWV-NTVAETFSDHVLKKQWFQALQVFE-MLKEQPFYQPKEGTYMK 149
K L+ +E+ KA NT+ + D K + +AL++F M + +P T+
Sbjct: 375 KILRMMIEKGKKADVVTYNTLMKGLCD---KGKVDEALKLFNSMFDNENCLEPNVFTFNM 431
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
L+ L K G+ A K+ +MV++G Y LL + I EA Q+ L
Sbjct: 432 LIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDL- 490
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
P+ +TYS LI + + L+ +M + P N ++ K G +Q
Sbjct: 491 GFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQA 550
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+ + M +A C+PD+ + NT++ G ++ K G+ P+ TF+ LI
Sbjct: 551 KSLFQEM-GNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLIN 609
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
K D+ S +E M F + Y+++++ S GD + QM A+G
Sbjct: 610 RLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVL 669
Query: 390 DTK 392
D K
Sbjct: 670 DRK 672
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 179/405 (44%), Gaps = 25/405 (6%)
Query: 83 GYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQP 142
GY+ + L K L K + K ++ F D V+ Q FQ QV
Sbjct: 75 GYQPNTITLNTLMKGLCLKGEVKKSLH-----FHDKVVA-QGFQMDQV------------ 116
Query: 143 KEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTL 202
+Y LL L K G+ A K+ + + P +Y ++ C++ L++EA+
Sbjct: 117 ---SYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLY 173
Query: 203 NQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGK 262
++M P+V TYSTLI A + L +M +++ PN T I++ K
Sbjct: 174 SEMDA-RGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCK 232
Query: 263 AGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETR 322
G + + +L+ M + KP+V + NT++ + G+V ++ + G++P
Sbjct: 233 EGKVKEAKNLLAVMTKEGV-KPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVY 291
Query: 323 TFNILIGAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
++NI+I K KR+ + M+ + E + K P T TY+++I+ F +G ++
Sbjct: 292 SYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTV-TYSSLIDGFCKLGRITSALDLLKE 350
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M+ G AD T+ L++ K + + I N Y A+I K
Sbjct: 351 MYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGR 410
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+++++ + K CR + T+++M KEGM D+ A++ +
Sbjct: 411 HKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSK 455
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 168/371 (45%), Gaps = 25/371 (6%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL++ M++++ +P Y ++ L K A +++EM GI P Y+ L+
Sbjct: 134 ALKLLRMIEDRS-TRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLI 192
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+C + EAF LN+M L N P+VYTY+ L+ A + + + L M + V
Sbjct: 193 YGFCLAGQLMEAFGLLNEM-ILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGV 251
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PN V+ N ++ GY G +++ M++ P+V++ N ++ +VD
Sbjct: 252 KPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGV-NPNVYSYNIMIDRLCKSKRVDEAM 310
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF---PWTSSTYNNVI 363
+ + + P T T++ LI + K +++S ++ ++++ P TY +++
Sbjct: 311 NLLREVLHKNMVPNTVTYSSLIDGFCK---LGRITSALDLLKEMYHRGQPADVVTYTSLL 367
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-------LF-HKVISSVR 415
+A + F +M G++ + T+ LI+G G LF H ++ R
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCR 427
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ NV YN +IS K L E + +M+E C PD+ TF I+ + ++
Sbjct: 428 I--------NVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKD 479
Query: 476 MNDKVYALEQE 486
NDK L E
Sbjct: 480 QNDKAEKLLHE 490
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 135/322 (41%), Gaps = 20/322 (6%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A +F +M +GIEP L+ +C + +F L ++ L QP+ T +TL+
Sbjct: 29 AISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKL-GYQPNTITLNTLM 87
Query: 223 KACVDAMRFELIETL--YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
K ++ E+ ++L + + + + V+ +L G K G ++L M+E
Sbjct: 88 KGL--CLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLR-MIEDR 144
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
+ +P+V NTI+ V+ Y + GI P T++ LI + +
Sbjct: 145 STRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEA 204
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
++ M TY +++A G K + M EG+K + ++ L++G
Sbjct: 205 FGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDG 264
Query: 401 YANAG-------LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
Y G +FH ++ + NV YN +I K+ + E + + +
Sbjct: 265 YCLIGEVQNAKQMFHTMVQK-------GVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVL 317
Query: 454 EKHCRPDSETFSIMTEAYAKEG 475
K+ P++ T+S + + + K G
Sbjct: 318 HKNMVPNTVTYSSLIDGFCKLG 339
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 81/203 (39%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P + N I+ +++ + GI+P+ T NILI + +V
Sbjct: 8 PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ + KL + + T N +++ G+ K + +++ A+G + D ++ L+NG
Sbjct: 68 LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
G + +R+ NV YN +I K + E +Y M + P+ T
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187
Query: 464 FSIMTEAYAKEGMNDKVYALEQE 486
+S + + G + + L E
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNE 210
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 65/129 (50%), Gaps = 3/129 (2%)
Query: 114 TFSDHVLKKQWF-QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE 172
+ D + K Q +A +F +KE+ QP + TY L+ L K G+ + A+K+F ++
Sbjct: 365 SLLDALCKNQNLDKATALFMKMKERGI-QPNKYTYTALIDGLCKGGRHKNAQKLFQHLLV 423
Query: 173 EGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE 232
+G Y +++ C+ ++DEA ++M+ C PD T+ +I++ + + +
Sbjct: 424 KGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEE-NGCIPDAVTFEIIIRSLFEKDQND 482
Query: 233 LIETLYQDM 241
E L +M
Sbjct: 483 KAEKLLHEM 491
>gi|326503836|dbj|BAK02704.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 399
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 141/303 (46%), Gaps = 5/303 (1%)
Query: 110 TVAETFSDHVLKKQWFQ-ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
TV + D +LK + + A++V++ +K + E TY ++ + GKS QP A KVF
Sbjct: 50 TVYNAYLDGLLKARCAEKAVEVYQRMKRERCRTNTE-TYTLMINVYGKSKQPMSAMKVFK 108
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
EM G + YTAL+ A+ R L ++A +M+ + +PDVY Y+ L++A A
Sbjct: 109 EMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEEMQQAGH-EPDVYAYNALMEAYSRA 167
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
+ ++ M P+ + NI++ YG+AG+ + E V L+ P + +
Sbjct: 168 GFPQAASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEAVFES-LKRQGMAPTMKS 226
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
+L+ A G V E + G+ P+T N ++ AYG+ D M ++ M
Sbjct: 227 HMLLLAAHARSGNVARCEEVMAQLHKSGLAPDTIALNAMLNAYGRAGRLDDMERLLAAME 286
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
+ + TYN + A+ G + ME F + G+ AD T+ + YA +
Sbjct: 287 R-RGTRDVGTYNVAVNAYGRAGYLERMEAAFASLERRGLAADVVTWTSRMGAYARKKEYR 345
Query: 409 KVI 411
+ +
Sbjct: 346 RCL 348
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 149/333 (44%), Gaps = 3/333 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E TY LL +G A V +EM E GI P+ +Y A L + ++A
Sbjct: 12 PTEDTYALLLRAYCTAGSLHRAEGVISEMREHGIPPSATVYNAYLDGLLKARCAEKAVEV 71
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+MK C+ + TY+ +I + + ++++M N T ++ +
Sbjct: 72 YQRMKR-ERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANICTYTALVNAFA 130
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G+ ++ E V M + A +PDV+ N ++ ++ G + ++ G +P+
Sbjct: 131 REGLCEKAEEVFEEM-QQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLMQHMGCEPDR 189
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
++NIL+ AYG+ ++ + +V E +++ T ++ ++ A + G+ E Q
Sbjct: 190 ASYNILVDAYGRAGLHREAEAVFESLKRQGMAPTMKSHMLLLAAHARSGNVARCEEVMAQ 249
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
+H G+ DT ++N Y AG + + A + + +V YN ++A +A
Sbjct: 250 LHKSGLAPDTIALNAMLNAYGRAGRLDD-MERLLAAMERRGTRDVGTYNVAVNAYGRAGY 308
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
L ME + ++ + D T++ AYA++
Sbjct: 309 LERMEAAFASLERRGLAADVVTWTSRMGAYARK 341
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 146/319 (45%), Gaps = 7/319 (2%)
Query: 166 VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK--TLPNCQPDVYTYSTLIK 223
++ ++E PT + Y LL AYC + A +++M+ +P P Y+ +
Sbjct: 1 MYAALLEARCVPTEDTYALLLRAYCTAGSLHRAEGVISEMREHGIP---PSATVYNAYLD 57
Query: 224 ACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK 283
+ A E +YQ M NT T +++ YGK+ +V M +S CK
Sbjct: 58 GLLKARCAEKAVEVYQRMKRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEM-QSIGCK 116
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
++ T +++ FA +G + E +E+ + G +P+ +N L+ AY + S +
Sbjct: 117 ANICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEI 176
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
M+ + ++YN +++A+ G + E FE + +GM K+ L+ +A
Sbjct: 177 FSLMQHMGCEPDRASYNILVDAYGRAGLHREAEAVFESLKRQGMAPTMKSHMLLLAAHAR 236
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
+G + + K +A + NA+++A +A L +MER+ M+ + R D T
Sbjct: 237 SGNVARCEEVMAQLHKSGLAPDTIALNAMLNAYGRAGRLDDMERLLAAMERRGTR-DVGT 295
Query: 464 FSIMTEAYAKEGMNDKVYA 482
+++ AY + G +++ A
Sbjct: 296 YNVAVNAYGRAGYLERMEA 314
>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 587
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 142/330 (43%), Gaps = 5/330 (1%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L + G+ + AR+V + M + P+ Y L+ A C + +A V L+ M
Sbjct: 122 TYSALADGYCRVGRLDEARRVVDGM---PVLPSAYAYNPLMHALCVRGQVRDALVLLDNM 178
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
C PDV TY+ L++A + L M TP VT N+++ G + G
Sbjct: 179 -LYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGD 237
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D +L+ L S C P+ NT+L G+ + +E + + P T +
Sbjct: 238 VDYARELLNS-LPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLS 296
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
++I + ++ ++ + ++E M K TYN V+ + G Y M +
Sbjct: 297 VVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTD 356
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G K + T+ L+ G NA + + S+ ++ +N +I + M+
Sbjct: 357 GCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQA 416
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
V+K+M EK C P+S T+S + E AK G
Sbjct: 417 VEVFKQMPEKGCCPNSVTYSSVIEGLAKTG 446
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 144/368 (39%), Gaps = 36/368 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY LL K A ++ + M EG PT Y ++ CR +D A
Sbjct: 185 PDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYAREL 244
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
LN + + C P+ Y+T++K A R+E +E L +M + P+ T ++V+
Sbjct: 245 LNSLPSY-GCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLC 303
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G+F + R+L M C ++ T N ++S +G VD + G P
Sbjct: 304 QEGLFQRAIRLLEKM-SKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNI 362
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+NIL+ ++ +M M + T+N +I G F+Q
Sbjct: 363 FTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQ 422
Query: 382 MHAEGMKADTKTFCCLINGYANAGL---------------------FH----------KV 410
M +G ++ T+ +I G A G +H K+
Sbjct: 423 MPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEINYHLLAECLNEEDKL 482
Query: 411 ISSVRLASKLQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ ++++ KLQ I+ YN ++ + + + M C PD T+SI+
Sbjct: 483 VEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSIL 542
Query: 468 TEAYAKEG 475
+ A EG
Sbjct: 543 IQGLAHEG 550
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 68/182 (37%), Gaps = 43/182 (23%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEM---------- 170
K QA++VF+ + E+ P TY ++ L K+G+ E + ++ NEM
Sbjct: 410 KGLTMQAVEVFKQMPEKGCC-PNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEIN 468
Query: 171 ------------------------VEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
+ GI P LY +L CRN D+A L+ M
Sbjct: 469 YHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMV 528
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
+ C PD TYS LI+ + L + R V + + +N A +
Sbjct: 529 S-DGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRDVIVDNLIKN-------DASLL 580
Query: 267 DQ 268
DQ
Sbjct: 581 DQ 582
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 146/333 (43%), Gaps = 8/333 (2%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L++ K + A KVF M +EG YT L+ +C IDEA QM
Sbjct: 227 TYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQM 286
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
K C PDV TY+ L+ A + + +++M E + PN T +++ + K G
Sbjct: 287 KE-DGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGK 345
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D+ +LS MLE V N ++ + +G ++ + + + P +RT+N
Sbjct: 346 MDEGMEMLSTMLEKGLVS-SVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYN 404
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
LI + +K+ D+ +++ M + + TYN +I M +
Sbjct: 405 ELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKD 464
Query: 386 GMKADTKTFCCLINGYANAGLF---HKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
G D +TFC I+ G H+V S++ + N Y A+I KA+
Sbjct: 465 GFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLK---EKHAEANEFLYTALIDGYCKAEKF 521
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ ++KRM + C P+S TF+++ + KEG
Sbjct: 522 SDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEG 554
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 149/353 (42%), Gaps = 9/353 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL++F +KE + P TY L+ + G+ A K F EMVE GIEP YT L
Sbjct: 278 EALELFFQMKEDGCF-PDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVL 336
Query: 186 LAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMD 242
+ +C+ +DE L+ M K L + V ++ LI C M + I L M
Sbjct: 337 IDYFCKVGKMDEGMEMLSTMLEKGLVS---SVVPFNALIDGYCKRGMMEDAICVL-DSMK 392
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
V PN+ T N ++ G+ + D+ +L+ M E+ P++ T NT++ V
Sbjct: 393 LNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKL-SPNLVTYNTLIHGLCKARVV 451
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
D R + G P+ RTF I K ++ V E +++ Y +
Sbjct: 452 DSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTAL 511
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I+ + F++M EG ++ TF L++G G +S V + K
Sbjct: 512 IDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDA 571
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
V Y +I ++ D +M C+P+ T++ +AY ++G
Sbjct: 572 KPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQG 624
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 163/396 (41%), Gaps = 53/396 (13%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL+ FE + E +P TY L+ K G+ + ++ + M+E+G+ + + AL
Sbjct: 313 EALKFFEEMVENGI-EPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNAL 371
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ YC+ ++++A L+ MK C P+ TY+ LI + L M E
Sbjct: 372 IDGYCKRGMMEDAICVLDSMKLNKVC-PNSRTYNELICGFCRKKSMDRAMALLNKMYENK 430
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
++PN VT N ++ G KA + D R+ M++ PD T + G+V+
Sbjct: 431 LSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFV-PDQRTFCAFIDCLCKMGKVEQA 489
Query: 306 ERWYE-------------------------KFRNF----------GIDPETRTFNILIGA 330
+ +E KF + G P + TFN+L+
Sbjct: 490 HQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDG 549
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
K+ + S+++ M K T TY +IE D +QM + G + +
Sbjct: 550 LRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPN 609
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISA--CIKADDLMEM 445
T+ I Y G +++ + + K++ I + Y+ +++A CI D
Sbjct: 610 VVTYTAFIKAYCRQG---RLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLD--SA 664
Query: 446 ERVYKRMKEKHCRPDSETFSIMT-----EAYAKEGM 476
V RM + C P +T+SI+ E Y KEGM
Sbjct: 665 FGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGM 700
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 146/332 (43%), Gaps = 6/332 (1%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR--NSLIDEAFVTLN 203
+Y +L ++L + G + +F +M+ +G+EP + ++ A+C+ N ++ +A+
Sbjct: 157 SYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFC-G 215
Query: 204 QMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKA 263
MK C D +TY++LI +++ M + N V+ ++ G+ +
Sbjct: 216 LMKFGFCC--DSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEV 273
Query: 264 GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
G D+ + M E C PDV T +++ F G+ +++E+ GI+P T
Sbjct: 274 GKIDEALELFFQMKEDG-CFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYT 332
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
+ +LI + K D+ ++ M + + +N +I+ + G + + M
Sbjct: 333 YTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMK 392
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
+ +++T+ LI G+ + ++ + + +++ N+ YN +I KA +
Sbjct: 393 LNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVD 452
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
R++ M + PD TF + K G
Sbjct: 453 SAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMG 484
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 161/405 (39%), Gaps = 47/405 (11%)
Query: 99 ERKAKAKAWVNTV-------AETFSD-HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKL 150
E+ A+A ++ T AE FSD H+L K+ ML E F P T+ L
Sbjct: 498 EKHAEANEFLYTALIDGYCKAEKFSDAHLLFKR---------MLFEGCF--PNSITFNVL 546
Query: 151 LVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPN 210
L L K G+ E A + + M + +PT YT L+ R S D A + L+QM +
Sbjct: 547 LDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMIS-SG 605
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
CQP+V TY+ IKA R E + + E + ++ ++++ YG G D
Sbjct: 606 CQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAF 665
Query: 271 RVLSGMLESATCKPDVWTMNTILS--VF-------------ANKGQVDMMERW------- 308
VL M ++ C+P T + +L +F + VD W
Sbjct: 666 GVLIRMFDTG-CEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEI 724
Query: 309 ----YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+EK G P T++ LI K + +M++ + + +N+++
Sbjct: 725 ITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLS 784
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
+ +G + + M A +++ L+ G G K R
Sbjct: 785 SCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNY 844
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+ + ++ ++ + E ++ M++ CR S+T +++++
Sbjct: 845 DEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTMLSQ 889
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 91/202 (45%), Gaps = 16/202 (7%)
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
V + N + V + G +D + ++ N G++P +FN ++ A+ K +
Sbjct: 155 VTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFC 214
Query: 346 YMRKLQFPWTSSTYNNVIEAFS---DMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+ K F S TY ++I + ++GDA + FE M EG + ++ LI+G+
Sbjct: 215 GLMKFGFCCDSFTYTSLILGYCKIHELGDAYKV---FEIMPQEGCLRNEVSYTNLIHGFC 271
Query: 403 NAGLFHKVISSVRLASKLQIAENVSF-----YNAVISACIKADDLMEMERVYKRMKEKHC 457
G K+ ++ L Q+ E+ F Y +++A + E + ++ M E
Sbjct: 272 EVG---KIDEALELF--FQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGI 326
Query: 458 RPDSETFSIMTEAYAKEGMNDK 479
P+ T++++ + + K G D+
Sbjct: 327 EPNVYTYTVLIDYFCKVGKMDE 348
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 140/310 (45%), Gaps = 2/310 (0%)
Query: 166 VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC 225
V +EMV G+ P YT+++ A+C+ + A L +M T C P+V T++ L+K
Sbjct: 249 VVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVT-EGCVPNVQTFTVLVKGF 307
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
D + ++ M P+T++ N+++ G G + V S M +S C PD
Sbjct: 308 FDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKS-DCLPD 366
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
V T +T++ F+ G +D+ + N G P + ++ KK M+D+ ++++
Sbjct: 367 VRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLID 426
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
M P + T+N +I + D+G A F M G + +T+ L++G G
Sbjct: 427 KMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREG 486
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ + ++ YN IS + + E + RM + +PD+ TF+
Sbjct: 487 NCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFN 546
Query: 466 IMTEAYAKEG 475
+ AY KEG
Sbjct: 547 AIIHAYCKEG 556
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 140/337 (41%), Gaps = 13/337 (3%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P Y LL L + V++ M + G+EP Y L+ A C+N + A
Sbjct: 125 PTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRM 184
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L++M C+PD +++T+I A R + + +M TP + N V+ +
Sbjct: 185 LDEMAR-KGCRPDEVSHTTIISALCKLDRLDEARGILAEM-----TPVGASYNAVV--HA 236
Query: 262 KAGMFDQME--RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
G F E V+ M+ +PD +I+ F ++ M + G P
Sbjct: 237 LCGQFRMREVFLVVDEMVHRGL-RPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVP 295
Query: 320 ETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
+TF +L+ G + +++D + + +M + ++ +YN +I +GD K +
Sbjct: 296 NVQTFTVLVKGFFDDGKVHDAL-GMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFV 354
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
F M D +T+ LI+G++ AG +S + NV Y ++ K
Sbjct: 355 FSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCK 414
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ E + +M ++C P++ TF+ + + G
Sbjct: 415 KVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLG 451
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 158/383 (41%), Gaps = 18/383 (4%)
Query: 117 DHVLKKQWFQAL-QVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
D +L++ A+ V++ +++ +P TY L+ L ++ + AR++ +EM +G
Sbjct: 135 DALLRENLVAAVVPVYDNMRKAGV-EPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGC 193
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
P +T +++A C+ +DEA L +M P +Y+ ++ A R +
Sbjct: 194 RPDEVSHTTIISALCKLDRLDEARGILAEM------TPVGASYNAVVHALCGQFRMREVF 247
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
+ +M R + P+TV ++G + KA +L+ M+ C P+V T ++
Sbjct: 248 LVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEG-CVPNVQTFTVLVKG 306
Query: 296 FANKGQV-DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 354
F + G+V D + W G P T ++N+LI + V M K
Sbjct: 307 FFDDGKVHDALGMWNWMVAE-GWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLP 365
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
TY+ +I+ FS GD + M G K + + +++ +F + + +
Sbjct: 366 DVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLI 425
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
S N +N +I + V+ M+ C P+ T++ + +E
Sbjct: 426 DKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFRE 485
Query: 475 GMNDKVYALEQEKLQMLLEASGH 497
G ++ L+ML E H
Sbjct: 486 GNC-------EDALRMLTEMLNH 501
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 145/339 (42%), Gaps = 20/339 (5%)
Query: 76 VSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAE-----TFSDHVLKKQWF----- 125
V+E +P ++ +K + W VAE T S +VL +
Sbjct: 289 VTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDL 348
Query: 126 -QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+AL VF + + P TY L+ K+G ++A ++N+M G +P +YT
Sbjct: 349 KRALFVFSCMGKSDCL-PDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTN 407
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
++ C+ + D+A +++M +L NC P+ T++TLI++ D R ++ M
Sbjct: 408 MVDVLCKKVMFDQAENLIDKM-SLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRY 466
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
PN T N +L G + G + R+L+ ML + + + NT +S +
Sbjct: 467 GCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGF-ELSLVSYNTTISGLCQMRMIKE 525
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ GI P+ TFN +I AY K+ + ++ M + P Y +++
Sbjct: 526 AMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMS 585
Query: 365 AFSD---MGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+ DA M Y + ++ EG+ + T+ L+ G
Sbjct: 586 GLCSQHKLDDA--MVYLLKMLY-EGICPNEATWNVLVRG 621
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 153/340 (45%), Gaps = 3/340 (0%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
+ + W L++ + ++ + + E T ++ G+ G + AR+ F+++ G +P
Sbjct: 285 MGRAWSMILELLDEMRSKGL-EFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGT 343
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
Y ++L + + + EA L +M+ NC+PD TY+ L+ A V A + +
Sbjct: 344 ATYNSMLQVFGKAGVYTEALNILKEMED-NNCEPDAITYNELVAAYVRAGFHDEGAAVID 402
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
M + V PN +T V+ YGKAG D+ V G ++ C P+V T N +L + +
Sbjct: 403 TMASKGVMPNAITYTTVINAYGKAGDADKALEVF-GQMKELGCVPNVCTYNNVLVLLGKR 461
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
+ + M + + G P+ T+N ++ G+K +S V+ M+ F T+
Sbjct: 462 SRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETF 521
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
N +I A+ G + + +M A G T+ L+N A G + S V K
Sbjct: 522 NTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRK 581
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
N + Y+ ++ KA ++ +E+V + + H P
Sbjct: 582 KGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFP 621
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 147/334 (44%), Gaps = 6/334 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR-NSLIDEAFV 200
P T+ +L + G+ G+ + +V EM G EP E + L++AY R S +D A
Sbjct: 481 PDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVA-- 538
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ P + TY+ L+ A ++ E++ DM ++ PN + +++L Y
Sbjct: 539 KMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCY 598
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
KAG +E+V + + P + T++ Q+ MER + + +N G +
Sbjct: 599 SKAGNVRGLEKVEMEIYDGHVF-PSWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGYKLD 657
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
N ++ + + + +K +++ + TYN++I+ ++ +GD E +
Sbjct: 658 MVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLK 717
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+ G+ D ++ +I G+ GL + I + + + +N +S C +
Sbjct: 718 DIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMS-CYAGN 776
Query: 441 DLM-EMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
L E + V + M E C P+ T+ I+ + Y K
Sbjct: 777 GLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIK 810
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 118/262 (45%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
DV +T++ A +++ +++ M E + P VT N++L YGK G M L
Sbjct: 236 DVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRAWSMILEL 295
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
+ S + D +T T++S +G +D R+++ + G P T T+N ++ +GK
Sbjct: 296 LDEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGK 355
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+Y + ++++ M + TYN ++ A+ G + M ++G+ + T
Sbjct: 356 AGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAIT 415
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+ +IN Y AG K + +L NV YN V+ K +M ++ MK
Sbjct: 416 YTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMK 475
Query: 454 EKHCRPDSETFSIMTEAYAKEG 475
C PD T++ M ++G
Sbjct: 476 LNGCPPDRITWNTMLAVCGEKG 497
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 155/408 (37%), Gaps = 74/408 (18%)
Query: 153 LLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRN---------------SLIDE 197
+LG+ Q +A K+F+ + E + T +L AY R + +D
Sbjct: 211 MLGRESQYSIASKLFDIIPVEEYSLDVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDP 270
Query: 198 AFVTLNQMKTL--------------------PNCQPDVYTYSTLIKACVDAMRFELIETL 237
VT N M + + D +T +T+I AC +
Sbjct: 271 TLVTYNVMLDVYGKMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGREGILDEARRF 330
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
+ D+ P T T N +L +GKAG++ + +L M E C+PD T N +++ +
Sbjct: 331 FDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEM-EDNNCEPDAITYNELVAAYV 389
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
G D + + G+ P T+ +I AYGK DK V M++L
Sbjct: 390 RAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVC 449
Query: 358 TYNNV-------------IEAFSDM----------------------GDAKHMEYTFEQM 382
TYNNV I+ DM G K + +M
Sbjct: 450 TYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREM 509
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
G + D +TF LI+ Y G V ++ YNA+++A + +
Sbjct: 510 KNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNW 569
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
E V M++K +P+ ++S++ Y+K G V LE+ ++++
Sbjct: 570 KAAESVVLDMRKKGFKPNETSYSLLLHCYSKAG---NVRGLEKVEMEI 614
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 149/389 (38%), Gaps = 45/389 (11%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY ++ GK+G + A +VF +M E G P Y +L + S ++
Sbjct: 411 PNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKI 470
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L MK L C PD T++T++ C + + + + + ++M P+ T N ++ YG
Sbjct: 471 LCDMK-LNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYG 529
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G + ++ M+ +A P + T N +L+ A +G E R G P
Sbjct: 530 RCGSEVDVAKMYGEMV-AAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNE 588
Query: 322 RTFNILIGAYGKKRMYDKMSSV-MEYMRKLQFP-WTSSTYNNVIEAFSDMGDAKHMEYTF 379
++++L+ Y K + V ME FP W ++ K ME F
Sbjct: 589 TSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWM--LLRTLVLTNYKCRQLKGMERAF 646
Query: 380 EQM-----------------------------------HAEGMKADTKTFCCLINGYANA 404
Q+ H G++ + T+ LI+ YA
Sbjct: 647 HQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARV 706
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
G K ++ I+ +V YN VI K + E R+ M +P TF
Sbjct: 707 GDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITF 766
Query: 465 SIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
+ YA G+ +A E ++ ++E
Sbjct: 767 NTFMSCYAGNGL----FAEADEVIRYMIE 791
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 144/345 (41%), Gaps = 4/345 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P + TY L+ +G ++A ++ EM G E ++T L+ C + EA
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
M +C PDV TY+ L+ A A +F+ + + ++M R P+TVT + ++ G
Sbjct: 67 FRAMA--KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLC 124
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK-GQVDMMERWYEKFRNFGIDPE 320
K G +Q RVL +++ D TI+ NK V++ + G P
Sbjct: 125 KFGSEEQAFRVLEDVIQRGMGNSDA-AFETIIQRLCNKYNSVELASKVLGVVIAKGFTPT 183
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
FN++I + K + D ++E M + T+ +I + E
Sbjct: 184 VLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLE 243
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M G + T+ +ING G +L + NV +N +I KA
Sbjct: 244 KMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAK 303
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
+ E ++Y RM+E C PD T++ + + K D+ + L Q
Sbjct: 304 RIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQ 348
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 128/291 (43%), Gaps = 2/291 (0%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K A ++ E++ E+ P T+ L+ L K+ + A+++ +MV G P
Sbjct: 198 KDLDSAYKLLEVMIEKGCV-PNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVT 256
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y+ ++ C+ +D+A+ L Q+ NC P+V T++ LI A R E LY M
Sbjct: 257 YSTVINGLCKQGQVDDAY-ELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRM 315
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
E P+ +T N ++ G K+ D+ ++ + ES + T +T+ +A G+
Sbjct: 316 RETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGR 375
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ R + + G P+ T+ LI Y K ++ ++E M FP +T +
Sbjct: 376 MADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSA 435
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVIS 412
V+ + + F+ M A G D + ++ G A A +K ++
Sbjct: 436 VLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALA 486
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 158/379 (41%), Gaps = 11/379 (2%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+ Q A ++F+++ E+ P T+ L+ L K+ + E AR++++ M E G P
Sbjct: 267 QGQVDDAYELFQLM-ERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDII 325
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
Y +L+ C++ +DEAF + + TYSTL R ++
Sbjct: 326 TYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSM 385
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
+ ++ +P+ T ++ Y K ++ ++ M S P V T++ +L
Sbjct: 386 LVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEM-ASKGFPPRVNTLSAVLGGLFEGN 444
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM---RKLQFPWTSS 357
+ + ++ G + +N+++ + ++K +V+E + R +F +SS
Sbjct: 445 HTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSS 504
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
+ ++E+ +G + +M G A ++ L++G + + +
Sbjct: 505 AVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAM 564
Query: 418 SKLQIAENVSFYNAVIS---ACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
A +S N VIS + K DD E+ +RM + C PD ET + + Y K
Sbjct: 565 VSAGPAPEISTVNVVISWLCSAAKVDDAYEL---VQRMSKLGCCPDIETCNTLIGGYCKS 621
Query: 475 GMNDKVYALEQEKLQMLLE 493
G D L +E + LE
Sbjct: 622 GRADLARKLLEEMTEAGLE 640
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 110/276 (39%), Gaps = 3/276 (1%)
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
C P+ +TY LI+ A ++ L ++M N V ++ G AG +
Sbjct: 5 CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
M + C PDV T ++ G+ D + + G P+T TF+ LI
Sbjct: 65 EHFRAMAKD--CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDG 122
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM-EYTFEQMHAEGMKA 389
K ++ V+E + + + + + +I+ + ++ + + A+G
Sbjct: 123 LCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTP 182
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
F +ING+ A + + + NV + +I+ KA+ + E +++
Sbjct: 183 TVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLL 242
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
++M C P+ T+S + K+G D Y L Q
Sbjct: 243 EKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQ 278
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 91/223 (40%), Gaps = 3/223 (1%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+ P+ T +L L + E A ++F+ M G +Y ++ R S ++A
Sbjct: 426 FPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKAL 485
Query: 200 VTLNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVL 257
L Q+ K P L+++ R + + L M ER + N +L
Sbjct: 486 AVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLL 545
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
G + +D+ +V M+ SA P++ T+N ++S + +VD ++ G
Sbjct: 546 SGLSRLQRWDEATQVFEAMV-SAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGC 604
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
P+ T N LIG Y K D ++E M + +T++
Sbjct: 605 CPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHD 647
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
TY +I FS GD E+M + G + + L+ G +AG + + R
Sbjct: 11 TYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM 70
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
+K A +V Y A++ A KA E + + + M + C PD+ TFS + + K G
Sbjct: 71 AK-DCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSE 129
Query: 478 DKVYALEQEKLQ 489
++ + + ++ +Q
Sbjct: 130 EQAFRVLEDVIQ 141
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 163/373 (43%), Gaps = 39/373 (10%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+QP T+ L+ L G+ A +F++M+ EG +P Y L+ C+ A
Sbjct: 136 HQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAI 195
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
L M+ NCQP+V +STLI + C D E ++ +M + ++PN VT N ++
Sbjct: 196 RLLRSMEQ-GNCQPNVVVFSTLIDSLCKDRQVTEAFN-IFSEMITKGISPNIVTYNSLIH 253
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
G K + + +++ M++S PDV+T+NT++ +G V + + G++
Sbjct: 254 GLCKLCEWKHVTTLMNEMVDSKI-MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE 312
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P T+N L+ + + D V + M +YN +I + + Y
Sbjct: 313 PNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYL 372
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISSVRLA-------------- 417
FE+M + + +T T+ LI+G + G LFH++++ ++
Sbjct: 373 FEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCK 432
Query: 418 --------SKLQIAE------NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
+ L+ E ++ Y ++ +A +L + ++ + K +P+ T
Sbjct: 433 NRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWT 492
Query: 464 FSIMTEAYAKEGM 476
++IM K+G+
Sbjct: 493 YNIMIHGLCKQGL 505
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 164/398 (41%), Gaps = 38/398 (9%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F+ + + F QP TY L+ L K G A ++ M + +P +++ L
Sbjct: 158 EALHLFDKMIGEGF-QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + C++ + EAF ++M T P++ TY++LI ++ + TL +M +
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMIT-KGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 275
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+ T N V+ K GM + V+ M+ +P+V T N ++ + +VD+
Sbjct: 276 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV-EPNVVTYNALMDGHCLRNEVDVA 334
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ ++ + ++N LI Y K + DK + E M + + + TYN +I
Sbjct: 335 VKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHG 394
Query: 366 FSDMGDAKHMEYTFEQMHAEG---------------------------MKA--------D 390
+G + F +M A G +KA D
Sbjct: 395 LCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPD 454
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
+ + +++G AG S + NV YN +I K L E +++
Sbjct: 455 IQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFS 514
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
M + C P+ T++++T + + + L +E L
Sbjct: 515 EMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEML 552
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 113/291 (38%), Gaps = 35/291 (12%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L K G A V + M+ G+EP Y AL+ +C + +D A + M +C
Sbjct: 290 LCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM-VHKDCVA 348
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------MF 266
+V +Y+TLI + L+++M + +TPNTVT N ++ G G +F
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408
Query: 267 DQME-----------RVLSGML----------------ESATCKPDVWTMNTILSVFANK 299
+M R LS L E + PD+ TIL
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 468
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G+++ + + G+ P T+NI+I K+ + + S + M K TY
Sbjct: 469 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTY 528
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
N + F +A E+M A G D T L+ ++ GL V
Sbjct: 529 NLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSV 579
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 143/363 (39%), Gaps = 42/363 (11%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+AL F ML +QP P + +LL + K+ + +M GI P
Sbjct: 53 EALSTFNRMLHKQP--PPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDE 243
++ + C + +D AF L ++ L + QPD T++TLI+ CV+ E + L+ M
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGH-QPDATTFTTLIRGLCVEGKIGEALH-LFDKMIG 168
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
PN VT ++ G K G R+L M E C+P+V +T++ QV
Sbjct: 169 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM-EQGNCQPNVVVFSTLIDSLCKDRQVT 227
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ + GI P T+N LI K + ++++M M + T N V+
Sbjct: 228 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV 287
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
+A EGM A+ H V V + +
Sbjct: 288 DALC----------------KEGMVAEA----------------HDV---VDMMIHRGVE 312
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
NV YNA++ +++ +V+ M K C + +++ + Y K DK L
Sbjct: 313 PNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYL 372
Query: 484 EQE 486
+E
Sbjct: 373 FEE 375
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/380 (19%), Positives = 146/380 (38%), Gaps = 37/380 (9%)
Query: 136 EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI 195
EQ QP + L+ L K Q A +F+EM+ +GI P Y +L+ C+
Sbjct: 202 EQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEW 261
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQN 254
+N+M PDV+T +T++ A C + M E + M R V PN VT N
Sbjct: 262 KHVTTLMNEMVD-SKIMPDVFTLNTVVDALCKEGMVAE-AHDVVDMMIHRGVEPNVVTYN 319
Query: 255 IVLGGYGKAGMFDQMERVLSGM--------------LESATCK----------------- 283
++ G+ D +V M L + CK
Sbjct: 320 ALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQ 379
Query: 284 ---PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
P+ T NT++ + G++ + + G P+ T+ L K R DK
Sbjct: 380 ELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKA 439
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
++++ + + Y +++ G+ + F + ++G++ + T+ +I+G
Sbjct: 440 MALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHG 499
Query: 401 YANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
GL + +K + N YN + ++ ++ + + + M + D
Sbjct: 500 LCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD 559
Query: 461 SETFSIMTEAYAKEGMNDKV 480
T +++ + +G++ V
Sbjct: 560 VSTTTLLVGMLSDDGLDQSV 579
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 151/335 (45%), Gaps = 2/335 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY L+ G + A K+ +EM+ G++P Y ++ C+ ++D AF
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFE 284
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ ++ L C+PDV +Y+ L++A ++ ++E E L M PN VT +I++
Sbjct: 285 MVRNLE-LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ G ++ +L M E PD ++ + +++ F +G++D+ + E + G P+
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGL-TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 402
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+N ++ K D+ + + ++ SS+YN + A GD +
Sbjct: 403 IVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL 462
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M + G+ D T+ +I+ G+ + + + +V YN V+ KA
Sbjct: 463 EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 522
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + V + M CRP+ T++++ E G
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 557
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 160/358 (44%), Gaps = 4/358 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A++V E+L++ F QP Y L+ K + + A +V + M + P Y +
Sbjct: 142 KAVRVMEILEK--FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIM 199
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + C +D A LNQ+ + NCQP V TY+ LI+A + + L +M R
Sbjct: 200 IGSLCSRGKLDLALKVLNQLLS-DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+ T N ++ G K GM D+ ++ LE C+PDV + N +L N+G+ +
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRN-LELKGCEPDVISYNILLRALLNQGKWEEG 317
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E+ K + DP T++ILI + ++ ++++ M++ + +Y+ +I A
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
F G E M ++G D + ++ G + + ++ + N
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 437
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
S YN + SA + D + + M PD T++ M +EGM D+ + L
Sbjct: 438 SSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFEL 495
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 108/244 (44%), Gaps = 4/244 (1%)
Query: 234 IETLY--QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNT 291
IE+L+ + M + P+ + ++ G+ + RV+ +LE +PDV+ N
Sbjct: 106 IESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME-ILEKFG-QPDVFAYNA 163
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
+++ F ++D R ++ R+ P+T T+NI+IG+ + D V+ +
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN 223
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
T TY +IEA G ++M + G+K D T+ +I G G+ +
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 283
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
VR +V YN ++ A + E E++ +M + C P+ T+SI+
Sbjct: 284 EMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343
Query: 472 AKEG 475
++G
Sbjct: 344 CRDG 347
>gi|298707411|emb|CBJ30040.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 564
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 147/347 (42%), Gaps = 9/347 (2%)
Query: 123 QWFQALQVFE-----MLKEQPF--YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
QW +A+ + + +L E P T+ + G +GQ E A + ++M EEG+
Sbjct: 119 QWERAVALLDQRALRLLGEMAAVGLSPNVTTFSSAVAACGNAGQWERALGLLDQMAEEGV 178
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
P ++A ++A + A L +M+ NC P+V TY+ I AC A + L +
Sbjct: 179 PPNEFTFSAAVSACGKAGQWRPALTILRRMRA-ANCPPNVQTYTAAIDACGKAGEWRLAQ 237
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
L +M E+ V PN +T N + G G + + +L M S +P++W+ ++
Sbjct: 238 GLLAEMREKGVAPNVITFNSAISALGNGGQWQEALNLLRDM-PSMGVQPNMWSYTAAVTA 296
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
+ + +E+ R+ GI + +F I A + ++ ++++ MR P T
Sbjct: 297 CGDNNRWARALAVHEQMRSRGIRGDEVSFTAAIDACAQGGAWEMALALLDEMRDEGIPPT 356
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
+++ I A +M G+ + +F I+ AG + +S +
Sbjct: 357 VRSFSTAISACGKGQQWGRAVALLREMEEVGVSPNEVSFNAAIDACGRAGQWRAALSLLD 416
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
S + YNAVI+AC K + V + M + D +
Sbjct: 417 KMSSAGVPRGTITYNAVIAACGKGKEWARAVSVLREMLAGQAKTDGD 463
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 149/370 (40%), Gaps = 9/370 (2%)
Query: 113 ETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE 172
+T K QW +AL + +E TY L+ + +SG+ E + + M
Sbjct: 39 QTLKSQGRKGQWKEALTAANLAREDGVVFDVY-TYSVLMSAVARSGRWEEVLVLLDVMRS 97
Query: 173 EGIEPTPELYTALLAAYCRNSLIDEAFVTLNQ--MKTLP-----NCQPDVYTYSTLIKAC 225
EG+ P + A + A + + A L+Q ++ L P+V T+S+ + AC
Sbjct: 98 EGVAPDHFAFGAAVNACAKGGQWERAVALLDQRALRLLGEMAAVGLSPNVTTFSSAVAAC 157
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
+A ++E L M E V PN T + + GKAG + +L M +A C P+
Sbjct: 158 GNAGQWERALGLLDQMAEEGVPPNEFTFSAAVSACGKAGQWRPALTILRRM-RAANCPPN 216
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
V T + G+ + + + R G+ P TFN I A G + + +++
Sbjct: 217 VQTYTAAIDACGKAGEWRLAQGLLAEMREKGVAPNVITFNSAISALGNGGQWQEALNLLR 276
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
M + +Y + A D EQM + G++ D +F I+ A G
Sbjct: 277 DMPSMGVQPNMWSYTAAVTACGDNNRWARALAVHEQMRSRGIRGDEVSFTAAIDACAQGG 336
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ ++ + I V ++ ISAC K + + M+E P+ +F+
Sbjct: 337 AWEMALALLDEMRDEGIPPTVRSFSTAISACGKGQQWGRAVALLREMEEVGVSPNEVSFN 396
Query: 466 IMTEAYAKEG 475
+A + G
Sbjct: 397 AAIDACGRAG 406
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 119/280 (42%), Gaps = 7/280 (2%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------MF 266
DVYTYS L+ A + R+E + L M V P+ + K G +
Sbjct: 68 DVYTYSVLMSAVARSGRWEEVLVLLDVMRSEGVAPDHFAFGAAVNACAKGGQWERAVALL 127
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
DQ L G + + P+V T ++ ++ N GQ + ++ G+ P TF+
Sbjct: 128 DQRALRLLGEMAAVGLSPNVTTFSSAVAACGNAGQWERALGLLDQMAEEGVPPNEFTFSA 187
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
+ A GK + +++ MR P TY I+A G+ + + +M +G
Sbjct: 188 AVSACGKAGQWRPALTILRRMRAANCPPNVQTYTAAIDACGKAGEWRLAQGLLAEMREKG 247
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+ + TF I+ N G + + ++ +R + + N+ Y A ++AC +
Sbjct: 248 VAPNVITFNSAISALGNGGQWQEALNLLRDMPSMGVQPNMWSYTAAVTACGDNNRWARAL 307
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
V+++M+ + R D +F+ +A A+ G + AL E
Sbjct: 308 AVHEQMRSRGIRGDEVSFTAAIDACAQGGAWEMALALLDE 347
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 130/322 (40%), Gaps = 17/322 (5%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
QW AL + ++ P TY + GK+G+ LA+ + EM E+G+ P +
Sbjct: 197 QWRPALTILRRMRAANC-PPNVQTYTAAIDACGKAGEWRLAQGLLAEMREKGVAPNVITF 255
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
+ ++A EA L M ++ QP++++Y+ + AC D R+ +++ M
Sbjct: 256 NSAISALGNGGQWQEALNLLRDMPSM-GVQPNMWSYTAAVTACGDNNRWARALAVHEQMR 314
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
R + + V+ + + G ++ +L M + P V + +T +S Q
Sbjct: 315 SRGIRGDEVSFTAAIDACAQGGAWEMALALLDEMRDEGI-PPTVRSFSTAISACGKGQQW 373
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ G+ P +FN I A G+ + S+++ M P + TYN V
Sbjct: 374 GRAVALLREMEEVGVSPNEVSFNAAIDACGRAGQWRAALSLLDKMSSAGVPRGTITYNAV 433
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMK----------ADTKTFCCLINGYANAGLFHKVIS 412
I A + +M A K AD ++ I+ AG + + IS
Sbjct: 434 IAACGKGKEWARAVSVLREMLAGQAKTDGDMAPVPMADVVSYSAAIDACVRAGEWEEAIS 493
Query: 413 SVRLA---SKLQIA-ENVSFYN 430
V L +L + E V +Y+
Sbjct: 494 LVELLRRDRRLNVGTEGVRYYH 515
>gi|242083798|ref|XP_002442324.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
gi|241943017|gb|EES16162.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
Length = 647
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 149/337 (44%), Gaps = 9/337 (2%)
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
G+P+LAR+ F+ + + T ++AL++AY R+ L EA L MK +P +
Sbjct: 2 GRPDLARRAFDSGIADRYGNTVFAHSALISAYARSGLATEAMGVLESMKG-AGLRPTTVS 60
Query: 218 YSTLIKAC----VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
Y+ +I AC VD +RF L ++ M + + P+ T N +L +AG + V
Sbjct: 61 YNAVIDACGKGGVD-LRFTL--GYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARTVF 117
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
M+ + + D++T NT + G +++ + I P T++ L+ + K
Sbjct: 118 DEMIHLGSGR-DIYTYNTFVDAICKCGNMELATQVVLDMEANNIKPNVVTYSTLMDGFSK 176
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
YD+ + E M+ L YN ++ + G + E M G++ DT T
Sbjct: 177 LEKYDEALKLREKMKSLGIQLDRVCYNTLLAIYVKTGKYDEIATVCEDMENLGIEKDTVT 236
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+ LINGY G V V+ +A +V Y+ +I KA + VY K
Sbjct: 237 YNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFK 296
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
E + D FS + AK G+ + +L E ++M
Sbjct: 297 ESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMIKM 333
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 135/306 (44%), Gaps = 43/306 (14%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ LL ++G E AR VF+EM+ G
Sbjct: 92 PDRKTFNSLLAACSRAGHLEDARTVFDEMIHLG--------------------------- 124
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
D+YTY+T + A EL + DM+ ++ PN VT + ++ G+
Sbjct: 125 ---------SGRDIYTYNTFVDAICKCGNMELATQVVLDMEANNIKPNVVTYSTLMDGFS 175
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K +D+ ++ M +S + D NT+L+++ G+ D + E N GI+ +T
Sbjct: 176 KLEKYDEALKLREKM-KSLGIQLDRVCYNTLLAIYVKTGKYDEIATVCEDMENLGIEKDT 234
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM---GDAKHMEYT 378
T+N LI YGK+ D ++ +++ MR + TY+ +I+ +S GDA ++
Sbjct: 235 VTYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLD 294
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
F++ G+KAD F I+ A GL +S + K+ I NV YN +I A K
Sbjct: 295 FKE---SGLKADVVLFSSFIDTLAKNGLVECALSLLDEMIKMGIKPNVVTYNTIIDAFGK 351
Query: 439 ADDLME 444
+ L E
Sbjct: 352 SKILTE 357
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 120/294 (40%), Gaps = 10/294 (3%)
Query: 114 TFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE 173
TF D + K + + E +P TY L+ K + + A K+ +M
Sbjct: 134 TFVDAICKCGNMELATQVVLDMEANNIKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSL 193
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
GI+ Y LLA Y + DE M+ L + D TY++LI R ++
Sbjct: 194 GIQLDRVCYNTLLAIYVKTGKYDEIATVCEDMENL-GIEKDTVTYNSLINGYGKQGRLDM 252
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
+ L QDM + V P+ +T + ++ Y KAGM V ES K DV ++ +
Sbjct: 253 VAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESG-LKADVVLFSSFI 311
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY-----DKMSSVMEYMR 348
A G V+ ++ GI P T+N +I A+GK ++ M V Y
Sbjct: 312 DTLAKNGLVECALSLLDEMIKMGIKPNVVTYNTIIDAFGKSKILTEEDPGNMGIVGVYGG 371
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYT---FEQMHAEGMKADTKTFCCLIN 399
++ T M ++ + + F++M +G++ + TF ++N
Sbjct: 372 QIVRATNPVTRGGRSATDVRMRRSQELFFILELFQKMVQQGVRPNVVTFSAILN 425
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 159/373 (42%), Gaps = 18/373 (4%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K+ AL+ F ++ Y LL L K + + A + +EM + G EP
Sbjct: 58 KRSIDALRCFRAMQGSGIVADTV-IYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVT 116
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ-- 239
Y +L+ C+N+ D A MK++ C P + TY+TL+ + E L+Q
Sbjct: 117 YNSLIDGLCKNNEPDRAQELFEHMKSV-ECSPSMVTYNTLLDGLFRTGKLERAMALFQEM 175
Query: 240 ------DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
DMD+R +PN +T ++++ G KA Q +L M ++ C PDV T ++
Sbjct: 176 LDRRSHDMDDRC-SPNVITYSVLIDGLCKANRVSQAVELLESM-KARGCSPDVITYTILV 233
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
+ +V + + G P T+N L+ + R ++S + MR +
Sbjct: 234 DGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRAR---RVSDALALMRDMTCR 290
Query: 354 WTSS---TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
+ TY +I+ +G K M +G D + LING A +
Sbjct: 291 GCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDES 350
Query: 411 ISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
I+ +R A I +V Y++VI +++ L E R+ +K + C PD +S + +
Sbjct: 351 IALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDG 410
Query: 471 YAKEGMNDKVYAL 483
K G D+ + L
Sbjct: 411 LCKAGKVDEAFDL 423
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 147/347 (42%), Gaps = 3/347 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L K+ + A ++ M G P YT L+ C+ S + A+
Sbjct: 189 PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEV 248
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L +M C P++ TY++L+ A R L +DM R TPN VT ++ G
Sbjct: 249 LREMLD-AGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLC 307
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G +L+ M++ PD+ N +++ QVD + + GI P+
Sbjct: 308 KVGRVKDACAMLADMIDKGG-TPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDV 366
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T++ +I + D+ ++ Y++ P Y+ +I+ G +E
Sbjct: 367 VTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEV 426
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M +G AD T+ LI+G AG + + ++ + YN++I +
Sbjct: 427 MAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNH 486
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAK-EGMNDKVYALEQEK 487
L E + + M+ +C P + T++I+ + E ++ V LEQ K
Sbjct: 487 LDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAK 533
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 157/390 (40%), Gaps = 47/390 (12%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QA+++ E +K + P TY L+ L K + A +V EM++ G P Y +L
Sbjct: 209 QAVELLESMKARGC-SPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSL 267
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L CR + +A + M T C P+V TY TLI R + + DM ++
Sbjct: 268 LHGLCRARRVSDALALMRDM-TCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKG 326
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQ----MERVLSGML------------------------ 277
TP+ + N+++ G KA D+ + R +SG +
Sbjct: 327 GTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEAC 386
Query: 278 ------ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+S C PDV +T++ G+VD YE G D + T++ LI
Sbjct: 387 RLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGL 446
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
K D+ ++ M ++ P ++ TYN++I+ D+ E+M
Sbjct: 447 CKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSA 506
Query: 392 KTFCCLINGYANAGLFHKVISSV--------RLASKLQIAENVSFYNAVISACIKADDLM 443
T+ LI+G +V S+V R + A + Y+++I KA +
Sbjct: 507 VTYNILIHGMCR---MERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVA 563
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
E ++ M + PD T+SI+ E K
Sbjct: 564 EALDYFQEMIDNGVIPDHITYSILLEGLKK 593
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 107/267 (40%), Gaps = 29/267 (10%)
Query: 208 LPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFD 267
LP CQPDVYTY+ L++ + + + +M +++ PN +I++ G KA
Sbjct: 2 LPICQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSI 61
Query: 268 QMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
R M S D +LS + ++D + R+ G +P T+N L
Sbjct: 62 DALRCFRAMQGSGI-VADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSL 120
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
I K D+ + E+M+ ++ + TYN +++ G + F++M +
Sbjct: 121 IDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEM-LDRR 179
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
D C + NV Y+ +I KA+ + +
Sbjct: 180 SHDMDDRC---------------------------SPNVITYSVLIDGLCKANRVSQAVE 212
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKE 474
+ + MK + C PD T++I+ + KE
Sbjct: 213 LLESMKARGCSPDVITYTILVDGLCKE 239
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 80/209 (38%), Gaps = 37/209 (17%)
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK-KRMYDKM 340
C+PDV+T +L F G++D +R +++ R+ + P +ILI K KR D +
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
F M G+ ADT + L++G
Sbjct: 65 R------------------------------------CFRAMQGSGIVADTVIYTALLSG 88
Query: 401 YANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
+ ++ + NV YN++I K ++ + +++ MK C P
Sbjct: 89 LWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPS 148
Query: 461 SETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
T++ + + + G ++ AL QE L
Sbjct: 149 MVTYNTLLDGLFRTGKLERAMALFQEMLD 177
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 52/128 (40%), Gaps = 8/128 (6%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L + A ++ EM P+ Y L+ CR +D A V
Sbjct: 469 PSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVL 528
Query: 202 LNQMKTLPNCQP------DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI 255
L Q K C D YS+LI A R +Q+M + V P+ +T +I
Sbjct: 529 LEQAKA--RCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSI 586
Query: 256 VLGGYGKA 263
+L G K+
Sbjct: 587 LLEGLKKS 594
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 163/373 (43%), Gaps = 39/373 (10%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+QP T+ L+ L G+ A +F++M+ EG +P Y L+ C+ A
Sbjct: 136 HQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAI 195
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
L M+ NCQP+V +STLI + C D E ++ +M + ++PN VT N ++
Sbjct: 196 RLLRSMEQ-GNCQPNVVVFSTLIDSLCKDRQVTEAFN-IFSEMITKGISPNIVTYNSLIH 253
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
G K + + +++ M++S PDV+T+NT++ +G V + + G++
Sbjct: 254 GLCKLCEWKHVTTLMNEMVDSKI-MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE 312
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P T+N L+ + + D V + M +YN +I + + Y
Sbjct: 313 PNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYL 372
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISSVRLA-------------- 417
FE+M + + +T T+ LI+G + G LFH++++ ++
Sbjct: 373 FEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCK 432
Query: 418 --------SKLQIAE------NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
+ L+ E ++ Y ++ +A +L + ++ + K +P+ T
Sbjct: 433 NRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWT 492
Query: 464 FSIMTEAYAKEGM 476
++IM K+G+
Sbjct: 493 YNIMIHGLCKQGL 505
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 164/398 (41%), Gaps = 38/398 (9%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F+ + + F QP TY L+ L K G A ++ M + +P +++ L
Sbjct: 158 EALHLFDKMIGEGF-QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + C++ + EAF ++M T P++ TY++LI ++ + TL +M +
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMIT-KGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 275
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+ T N V+ K GM + V+ M+ +P+V T N ++ + +VD+
Sbjct: 276 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV-EPNVVTYNALMDGHCLRNEVDVA 334
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ ++ + ++N LI Y K + DK + E M + + + TYN +I
Sbjct: 335 VKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHG 394
Query: 366 FSDMGDAKHMEYTFEQMHAEG---------------------------MKA--------D 390
+G + F +M A G +KA D
Sbjct: 395 LCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPD 454
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
+ + +++G AG S + NV YN +I K L E +++
Sbjct: 455 IQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFS 514
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
M + C P+ T++++T + + + L +E L
Sbjct: 515 EMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEML 552
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 113/291 (38%), Gaps = 35/291 (12%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L K G A V + M+ G+EP Y AL+ +C + +D A + M +C
Sbjct: 290 LCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM-VHKDCVA 348
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------MF 266
+V +Y+TLI + L+++M + +TPNTVT N ++ G G +F
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408
Query: 267 DQME-----------RVLSGML----------------ESATCKPDVWTMNTILSVFANK 299
+M R LS L E + PD+ TIL
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 468
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G+++ + + G+ P T+NI+I K+ + + S + M K TY
Sbjct: 469 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTY 528
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
N + F +A E+M A G D T L+ ++ GL V
Sbjct: 529 NLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSV 579
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 141/363 (38%), Gaps = 42/363 (11%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+AL F ML +QP P + +LL + K+ + +M GI P
Sbjct: 53 EALSTFNRMLHKQP--PPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDE 243
++ + C + +D AF L ++ L + QPD T++TLI+ CV+ E + L+ M
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGH-QPDATTFTTLIRGLCVEGKIGEALH-LFDKMIG 168
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
PN VT ++ G K G R+L M E C+P+V +T++ QV
Sbjct: 169 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM-EQGNCQPNVVVFSTLIDSLCKDRQVT 227
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ + GI P NI+ TYN++I
Sbjct: 228 EAFNIFSEMITKGISP-----NIV------------------------------TYNSLI 252
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
+ + KH+ +M + D T +++ G+ + V + +
Sbjct: 253 HGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE 312
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
NV YNA++ +++ +V+ M K C + +++ + Y K DK L
Sbjct: 313 PNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYL 372
Query: 484 EQE 486
+E
Sbjct: 373 FEE 375
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/380 (19%), Positives = 146/380 (38%), Gaps = 37/380 (9%)
Query: 136 EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI 195
EQ QP + L+ L K Q A +F+EM+ +GI P Y +L+ C+
Sbjct: 202 EQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEW 261
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQN 254
+N+M PDV+T +T++ A C + M E + M R V PN VT N
Sbjct: 262 KHVTTLMNEMVD-SKIMPDVFTLNTVVDALCKEGMVAE-AHDVVDMMIHRGVEPNVVTYN 319
Query: 255 IVLGGYGKAGMFDQMERVLSGM--------------LESATCK----------------- 283
++ G+ D +V M L + CK
Sbjct: 320 ALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQ 379
Query: 284 ---PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
P+ T NT++ + G++ + + G P+ T+ L K R DK
Sbjct: 380 ELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKA 439
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
++++ + + Y +++ G+ + F + ++G++ + T+ +I+G
Sbjct: 440 MALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHG 499
Query: 401 YANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
GL + +K + N YN + ++ ++ + + + M + D
Sbjct: 500 LCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD 559
Query: 461 SETFSIMTEAYAKEGMNDKV 480
T +++ + +G++ V
Sbjct: 560 VSTTTLLVGMLSDDGLDQSV 579
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 166/356 (46%), Gaps = 10/356 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A ++ + + P TY ++ L + G+ + A ++ EM +G+EP ++AL
Sbjct: 63 RACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSAL 122
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER- 244
+ +C +DEA ++ T +C+ D + S LI R L+Q+M+ R
Sbjct: 123 ITGWCNARKVDEALKLYKEILT-SSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMRE 181
Query: 245 --SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
+ P+ VT ++ G+ K+G ++ ++L G++E C P+V T +++L G +
Sbjct: 182 DGAWKPDVVTYTALIDGFCKSGNLEKAMKML-GVMEGRKCVPNVVTYSSLLHGLCKAGDL 240
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
D + + + G P T+ LI D +M+ M P + +YN +
Sbjct: 241 DQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNAL 300
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK---VISSVRLASK 419
++ + +G + + F++M A+ D T+ CL+ G+ NA + ++ +++ A+
Sbjct: 301 LDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAA- 359
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
I +V Y+ V++ +A +E + M ++ P++ T+S + + K G
Sbjct: 360 -GIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAG 414
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 118/276 (42%), Gaps = 12/276 (4%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
+Y LL + G+ E A+++F EM + P YT L+ +C S ++EA L M
Sbjct: 296 SYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENM 355
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
KT PDV TYS ++ A RF Q+M R+V PN VT + ++ G KAG
Sbjct: 356 KTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGR 415
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+ VL + KPDV T ++ + + E+ N ++P TFN
Sbjct: 416 VNHAMEVLKNVD-----KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFN 470
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
+IGA + D+ ++ M TY ++E FS G + FE M +
Sbjct: 471 SVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRK 530
Query: 386 GMKADT-------KTFCCLINGYANAGLFHKVISSV 414
K+ + + F LI G A K ++ V
Sbjct: 531 AKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVV 566
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 156/348 (44%), Gaps = 21/348 (6%)
Query: 137 QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL--YTALLAAYCRNSL 194
+ F P E TY ++ L K+ A +V EM +G P+L Y+ ++ +C+
Sbjct: 2 REFVAPNERTYNVVVNGLCKARLTSKAYEVLKEM-RDGKSVAPDLVTYSTVINGFCKQGE 60
Query: 195 IDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQN 254
+D A L +M T PDV TY++++ + + + ++M + V P+ T +
Sbjct: 61 MDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFS 120
Query: 255 IVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRN 314
++ G+ A D+ ++ +L S +C+ D + + +++ + ++ YE F+
Sbjct: 121 ALITGWCNARKVDEALKLYKEILTS-SCRLDAVSSSALITGLCRERRIG---EAYELFQE 176
Query: 315 FGI------DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD 368
+ P+ T+ LI + K +K ++ M + TY++++
Sbjct: 177 MEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCK 236
Query: 369 MGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI----AE 424
GD F +M ++G + T+ LI+G A HKV ++ L ++ A+
Sbjct: 237 AGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAA---HKVDAARLLMDEMTATCCPAD 293
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
VS YNA++ + + E ++++K M K C PD T++ + +
Sbjct: 294 TVS-YNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFC 340
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 102/231 (44%), Gaps = 15/231 (6%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A + E +K P TY ++ ++ + A + EM+ + P Y++L
Sbjct: 347 EARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSL 406
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ ++ A L + +PDV TY+ +I+ R E TL ++M +
Sbjct: 407 IDGLCKAGRVNHAMEVLKNVD-----KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKR 461
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
V P+ T N V+G + G D+ ++L M +P + T T+L F+ G++++
Sbjct: 462 VEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGL-EPGMVTYTTLLEGFSRTGRMEIA 520
Query: 306 ERWYEKFRN--------FGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
+E R + PE + F+ LI K R DK +V+E +R
Sbjct: 521 YELFEVMRRKAKKSSSAANLVPE-QAFSALIRGLCKAREIDKAMAVVEELR 570
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY ++ L + + E A + EMV + +EP+ + +++ A CR +DEA+
Sbjct: 428 KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWK 487
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMR----FELIETLYQDMDERSVTPNTVTQ--- 253
L M +P + TY+TL++ R +EL E + + + S N V +
Sbjct: 488 LLVAMAA-HGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAF 546
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
+ ++ G KA D+ V+ L S C+P
Sbjct: 547 SALIRGLCKAREIDKAMAVVE-ELRSRECEP 576
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 162/356 (45%), Gaps = 7/356 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
QW +A V + E + P TY L+ L K G+ A + N MVE+G EP+ Y
Sbjct: 153 QWKEANTVLNAMAEHGIH-PDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTY 211
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM- 241
LL+ C+ L+ +AF L M + DV TY+TL+K D + + L+ M
Sbjct: 212 NVLLSGLCKEGLVIDAFKILRMMIEKGK-KADVVTYNTLMKGLCDKGKVDEALKLFNSMF 270
Query: 242 -DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
+E + PN T N+++GG K G + ++ M++ +C ++ T N +L G
Sbjct: 271 DNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSC-GNLVTYNMLLGGCLKAG 329
Query: 301 QV-DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
++ + ME W ++ + G P + T++ILI + K RM + + MR Y
Sbjct: 330 KIKEAMELW-KQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDY 388
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
N ++ + G + + F++M + D +F +I+G AG F V +
Sbjct: 389 NTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVE 448
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + + ++ +I+ K +L E + +RM PD+ + + + + +G
Sbjct: 449 MGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKG 504
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 178/401 (44%), Gaps = 12/401 (2%)
Query: 98 LERKAKAKAWVNTV-AETFSDHVLKKQWF-QALQVFEMLKEQPFYQPKEGTYMKLLVLLG 155
LE +A A + N+V T D + K +A+++ E +K++ F Y L+
Sbjct: 57 LEMEA-AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGF-DADVVLYGTLISGFC 114
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
+G + +++F+EM+ +GI Y+ L+ CR EA LN M PDV
Sbjct: 115 NNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAE-HGIHPDV 173
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
TY+ LI R L M E+ P+ VT N++L G K G+ ++L
Sbjct: 174 VTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRM 233
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVD-MMERWYEKFRNFG-IDPETRTFNILIGAYGK 333
M+E K DV T NT++ +KG+VD ++ + F N ++P TFN+LIG K
Sbjct: 234 MIEKGK-KADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCK 292
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+ K + M K TYN ++ G K ++Q+ G ++ T
Sbjct: 293 EGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFT 352
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSF--YNAVISACIKADDLMEMERVYKR 451
+ LI+G+ + + I+ N + YN ++++ K L + + +++
Sbjct: 353 YSILIDGFCKMRMLN--IAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQE 410
Query: 452 MKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLL 492
M +C PD +F+ M + K G V L+ + ++M L
Sbjct: 411 MGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGL 451
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 151/355 (42%), Gaps = 13/355 (3%)
Query: 125 FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
F+A+ + + + P +Y L+ L K+ + + A + EM G P T
Sbjct: 15 FEAMGLIREMGRKS-VSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTT 73
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ C++ +DEA L MK DV Y TLI + + + L+ +M +
Sbjct: 74 LMDGLCKDGRMDEAMELLEAMKK-KGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGK 132
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ--- 301
++ N VT + ++ G + G + + VL+ M E PDV T ++ G+
Sbjct: 133 GISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGI-HPDVVTYTGLIDGLCKDGRATH 191
Query: 302 -VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+D++ EK G +P T+N+L+ K+ + ++ M + TYN
Sbjct: 192 AMDLLNLMVEK----GEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYN 247
Query: 361 NVIEAFSDMGDAKHMEYTFEQM--HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
+++ D G F M + ++ + TF LI G G K + R
Sbjct: 248 TLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMV 307
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
K N+ YN ++ C+KA + E ++K++ + P+S T+SI+ + + K
Sbjct: 308 KKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCK 362
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 129/303 (42%), Gaps = 7/303 (2%)
Query: 92 KNLKKKLERKAKAKAWV-NTVAETFSDHVLKKQWFQALQVFE-MLKEQPFYQPKEGTYMK 149
K L+ +E+ KA NT+ + D K + +AL++F M + +P T+
Sbjct: 229 KILRMMIEKGKKADVVTYNTLMKGLCD---KGKVDEALKLFNSMFDNENCLEPNVFTFNM 285
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
L+ L K G+ A K+ +MV++G Y LL + I EA Q+ L
Sbjct: 286 LIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDL- 344
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
P+ +TYS LI + + L+ +M + P N ++ K G +Q
Sbjct: 345 GFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQA 404
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+ + M +A C+PD+ + NT++ G ++ K G+ P+ TF+ LI
Sbjct: 405 KSLFQEM-GNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLIN 463
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
K D+ S +E M F + Y+++++ S GD + QM A+G
Sbjct: 464 RLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVL 523
Query: 390 DTK 392
D K
Sbjct: 524 DRK 526
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 122/293 (41%), Gaps = 4/293 (1%)
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
+L CRN + EA + +M + PD+ +Y+TLI A + + L +M+
Sbjct: 4 VLKGLCRNGGVFEAMGLIREMGR-KSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAA 62
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
PN+VT ++ G K G D+ +L M + DV T++S F N G +D
Sbjct: 63 GCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGF-DADVVLYGTLISGFCNNGNLDR 121
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ +++ GI T++ L+ + + + ++V+ M + TY +I+
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
G A H M +G + T+ L++G GL +R+ +
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRM--KEKHCRPDSETFSIMTEAYAKEG 475
+V YN ++ + E +++ M E P+ TF+++ KEG
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEG 294
>gi|147801213|emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
Length = 1024
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 181/388 (46%), Gaps = 33/388 (8%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE-GIEPTPELYTA 184
++++VF+ +KE P T+ LL ++ K G+ +A+++F+EM++ G+ P +
Sbjct: 254 ESIKVFKTMKEIGV-SPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNI 312
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ +C NS++DE F +M C PDV TY+TL+ A + ++ + + M ++
Sbjct: 313 LIRGFCMNSMVDEGFWFFKEMSRF-KCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKK 371
Query: 245 S--VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE--SATCKPDVWTMNTILSVFANKG 300
S ++PN VT ++ GY M M LS + E S KP+ T NT++
Sbjct: 372 SPNLSPNVVTYTTLIRGYC---MKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQ 428
Query: 301 QVDMMERWYEKF-RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
++D ++ E + G P+T T N LI A+ ++ SV E M +L+ S+TY
Sbjct: 429 KLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATY 488
Query: 360 NNVIEAFSDMGDAKHMEYTFEQM-------HAEGMKADTKTFCCLINGYANAGLFHKVIS 412
+ ++ + GD + E F+++ H G K + + + G K
Sbjct: 489 SVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAER 548
Query: 413 SVRLASKLQIAENVSFYNAVISACIKAD-----DLMEMERVYKRMKEKHCRPDSETFSIM 467
R K + S+ ++ C + DL+ + M + PD+ET+ +M
Sbjct: 549 VFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVL------MLRRDFVPDAETYGLM 602
Query: 468 TEAYAKEGMNDKVYALEQEKLQMLLEAS 495
+ K+G D V A + L+ +L++S
Sbjct: 603 IDGLLKKG--DPVLA--HKSLEKMLKSS 626
>gi|297844848|ref|XP_002890305.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336147|gb|EFH66564.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 860
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 160/384 (41%), Gaps = 44/384 (11%)
Query: 116 SDHVLKK--QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE 173
++ VLK+ + AL F LK QP ++ TY ++ LG++ Q K+ +EMV +
Sbjct: 334 ANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRD 393
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
G +P Y L+ +Y R + ++EA NQM+ C+PD TY TLI A ++
Sbjct: 394 GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQE-AGCKPDRVTYCTLIDIHAKAGFLDI 452
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
+YQ M ++P+T T ++++ GKAG ++ M++ C P++ T N ++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG-CTPNLVTYNIMM 511
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
+ A + Y +N G +P+ T++I
Sbjct: 512 DLHAKARNYQSALKLYRDMQNAGFEPDKVTYSI--------------------------- 544
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
V+E G + E F +M + D + L++ + AG K
Sbjct: 545 --------VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ + NV N+++S ++ + + E + + M RP +T++++
Sbjct: 597 YQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSC--- 653
Query: 474 EGMNDKVYALEQEKLQMLLEASGH 497
D L+ L+ ++GH
Sbjct: 654 --CTDGRSKLDMGYCGQLMASTGH 675
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 133/320 (41%), Gaps = 5/320 (1%)
Query: 72 EYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWF--QALQ 129
++ G + T++ G + + K L+ + NTV H + + +A+
Sbjct: 361 KHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
VF ++E +P TY L+ + K+G ++A ++ M G+ P Y+ ++
Sbjct: 421 VFNQMQEAGC-KPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCL 479
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
+ + A +M C P++ TY+ ++ A ++ LY+DM P+
Sbjct: 480 GKAGHLPAAHKLFCEMVD-QGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPD 538
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
VT +IV+ G G ++ E V + M + PD ++ ++ G V+ +WY
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEM-QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
+ + G+ P T N L+ + + + +++ M L + TY ++ +D
Sbjct: 598 QAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 657
Query: 370 GDAKHMEYTFEQMHAEGMKA 389
M Y + M + G A
Sbjct: 658 RSKLDMGYCGQLMASTGHPA 677
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
L++ + D + N +L + G W + R G + T+ ++G G+ +
Sbjct: 322 LQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLK--RQPGFKHDGHTYTTMVGNLGRAKQ 379
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
+ ++ +++ M + + TYN +I ++ F QM G K D T+C
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
LI+ +A AG + + ++ + Y+ +I+ KA L +++ M ++
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 457 CRPDSETFSIMTEAYAK 473
C P+ T++IM + +AK
Sbjct: 500 CTPNLVTYNIMMDLHAK 516
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 162/346 (46%), Gaps = 2/346 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY ++ L K G +LA + N+M + +EP +Y ++ C+ +D+A
Sbjct: 13 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 72
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M+T +P+V TYS+LI + R+ L DM ER + P+ T + ++ +
Sbjct: 73 LFKEMET-KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 131
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + E++ M++ + P + T +++++ F ++D ++ +E + P+
Sbjct: 132 VKEGKLVEAEKLYDEMVKRSI-DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 190
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+N LI + K + ++ V M + + TYN +I+ GD + F+
Sbjct: 191 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 250
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M ++G+ + T+ L++G G K + + ++ + YN +I KA
Sbjct: 251 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 310
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ + ++ + K +PD ++ M + ++G ++ AL +E
Sbjct: 311 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 356
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 142/318 (44%), Gaps = 18/318 (5%)
Query: 166 VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC 225
+ + MV +G +P Y ++ C+ D AF LN+M+ +P V Y+T+I
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ-GKLEPGVLIYNTIIDGL 61
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
+ L+++M+ + + PN VT + ++ G + R+LS M+E PD
Sbjct: 62 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI-NPD 120
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
V+T + ++ F +G++ E+ Y++ IDP T++ LI + D+ + E
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180
Query: 346 YM-RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
+M K FP TYN +I+ F + F +M G+ +T T+ LI G A
Sbjct: 181 FMVSKHCFP-DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 239
Query: 405 G-------LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
G +F +++S + N+ YN ++ K L + V++ ++
Sbjct: 240 GDCDMAQEIFKEMVSD-------GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 292
Query: 458 RPDSETFSIMTEAYAKEG 475
P T++IM E K G
Sbjct: 293 EPTIYTYNIMIEGMCKAG 310
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 150/343 (43%), Gaps = 8/343 (2%)
Query: 136 EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI 195
EQ +P Y ++ L K + A +F EM +GI P Y++L++ C
Sbjct: 43 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 102
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI 255
+A L+ M PDV+T+S LI A V + E LY +M +RS+ P+ VT +
Sbjct: 103 SDASRLLSDMIE-RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 161
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
++ G+ D+ +++ M+ S C PDV T NT++ F +V+ + +
Sbjct: 162 LINGFCMHDRLDEAKQMFEFMV-SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 220
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G+ T T+NILI + D + + M P TYN +++ G +
Sbjct: 221 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 280
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAV 432
FE + M+ T+ +I G AG KV L L + +V YN +
Sbjct: 281 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAG---KVEDGWDLFCNLSLKGVKPDVVAYNTM 337
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
IS + E + ++K MKE P+S ++ + A ++G
Sbjct: 338 ISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 380
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 149/342 (43%), Gaps = 39/342 (11%)
Query: 93 NLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLV 152
NL K++E K + V T + S +W A ++ + E+ P T+ L+
Sbjct: 72 NLFKEMETKG-IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI-NPDVFTFSALID 129
Query: 153 LLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQ 212
K G+ A K+++EMV+ I+P+ Y++L+ +C + +DEA M + +C
Sbjct: 130 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS-KHCF 188
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
PDV TY+TLIK R E ++++M +R + NTVT NI++ G +AG D + +
Sbjct: 189 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 248
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDM---------------------------- 304
M+ P++ T NT+L G+++
Sbjct: 249 FKEMVSDGV-PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 307
Query: 305 ----MERWYEKFRNF---GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+E ++ F N G+ P+ +N +I + +K ++ ++ + M++ S
Sbjct: 308 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 367
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
YN +I A GD + ++M + G D T + N
Sbjct: 368 CYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 409
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 129/278 (46%), Gaps = 4/278 (1%)
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
PDV+TY+ LI C + + E TL+Q+ ++ V + T + ++ +GKAG + V
Sbjct: 299 PDVFTYNLLIALC-KSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEV 357
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
M + A C PD N ++S +G+VD E GI P+ RT+NI+I
Sbjct: 358 FYNM-QKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLS 416
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
Y+K S M++ + TYN ++ + F++M A D
Sbjct: 417 SCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLT 476
Query: 393 TFCCLINGYANAGLFHKVI-SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
TF LI+ A AG + S RL K+ A N YNA+IS ++ + + +++
Sbjct: 477 TFGTLIDTLAKAGRMEDALEQSARLV-KMGHAPNSYIYNALISGFCRSGQVDKGYELFQD 535
Query: 452 MKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
M E C PDS T++I+ +++ G L QE ++
Sbjct: 536 MIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVR 573
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 161/361 (44%), Gaps = 7/361 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F LK++ +P ++ L++ L K + A VF EM+ G++ + L
Sbjct: 143 RALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTL 202
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ CR ++ +A L+ M T C D +TY L+ A A + + + +
Sbjct: 203 IHCTCRLGMLRQARRLLHHM-TAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDG 261
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ V N ++ G+ + G + ++ + + PDV+T N ++++ +K Q++
Sbjct: 262 CALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKES-VPDVFTYNLLIALCKSK-QLEEA 319
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+++ G+ + T++ L+ A+GK K V M+K + YN +I
Sbjct: 320 LTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISC 379
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
G E M+ +G+ D +T+ +I+ ++ G + K S + + + + +
Sbjct: 380 LGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPD 439
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALE 484
V YN +++ K E ++ M+ C PD TF + + AK G M D ALE
Sbjct: 440 VVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMED---ALE 496
Query: 485 Q 485
Q
Sbjct: 497 Q 497
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 132/315 (41%), Gaps = 42/315 (13%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
KQ +AL +F+ EQ TY L+ GK+G+ A +VF M + G P +
Sbjct: 314 KQLEEALTLFQE-AEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVV 372
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y L++ + +DEA L M PD TY+ +I R+E + + M
Sbjct: 373 YNVLISCLGKQGKVDEALELLEDMNR-KGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMM 431
Query: 242 DERSVTPNTVTQNIVLGGYGK-------AGMFDQME----------------------RV 272
R +P+ VT N +L G K +FD+M+ R+
Sbjct: 432 KRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRM 491
Query: 273 LSGMLESATC-----KPDVWTMNTILSVFANKGQVDMMERWYEKFRNF---GIDPETRTF 324
+ +SA P+ + N ++S F GQVD + YE F++ P++ T+
Sbjct: 492 EDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVD---KGYELFQDMIECSCFPDSITY 548
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
IL+ + ++ +++ M + +TYN +I + S G + F++M A
Sbjct: 549 TILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIA 608
Query: 385 EGMKADTKTFCCLIN 399
+G D +T+ L N
Sbjct: 609 KGFNPDMQTYSALPN 623
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 144/345 (41%), Gaps = 10/345 (2%)
Query: 126 QALQVFE--MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
+A Q+FE M KE P TY LL+ L KS Q E A +F E + G+ Y+
Sbjct: 284 EATQLFESTMTKESV---PDVFTY-NLLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYS 339
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
L+ A+ + +A M+ C PD Y+ LI + + L +DM+
Sbjct: 340 YLMDAFGKAGRAAKALEVFYNMQK-AGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNR 398
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+ + P+ T NIV+ G +++ GM++ PDV T NT+L+ + D
Sbjct: 399 KGIMPDCRTYNIVIDVLSSCGRYEKAYSFF-GMMKRRKHSPDVVTYNTLLNGLKKLRRTD 457
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+++ + P+ TF LI K RM D + ++ P S YN +
Sbjct: 458 EACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAP-NSYIYNAL 516
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I F G F+ M D+ T+ L+ G++ G + ++ +
Sbjct: 517 ISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGH 576
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
++ YN +I + A + + ++K M K PD +T+S +
Sbjct: 577 TPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 134/351 (38%), Gaps = 37/351 (10%)
Query: 172 EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRF 231
++G+ + T + A+ R +D A L+ M+ CQPD ++ + + R
Sbjct: 46 QKGVGLSEVTCTECIQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRV 105
Query: 232 ELIETLYQDMDERS-VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP------ 284
E TL+ DM E P+ V N ++ GY KAG D+ + + + +CKP
Sbjct: 106 EQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFD 165
Query: 285 -----------------------------DVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
DV NT++ G + R
Sbjct: 166 TLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAH 225
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
+ T+ IL+ A+ + +++S ME R ++ YN +I+ F G
Sbjct: 226 ACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEA 285
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
FE + D T+ LI + + ++ + A + + +V Y+ ++ A
Sbjct: 286 TQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDA 344
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
KA + V+ M++ C PD+ ++++ K+G D+ L ++
Sbjct: 345 FGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLED 395
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 116/313 (37%), Gaps = 38/313 (12%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKA-------GMF 266
D +T + ++K R EL+ L ++ ++ V + VT + +G+A GM
Sbjct: 17 DAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRAGDLDAAMGML 76
Query: 267 DQMER-----------------------------VLSGMLESATCKPDVWTMNTILSVFA 297
D M R + M E+ C PDV NT+++ +
Sbjct: 77 DDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYC 136
Query: 298 NKGQVDMMERWYEKFRNFG-IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
G D + + + G P +F+ L+ K +V + M
Sbjct: 137 KAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADV 196
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
+ N +I +G + M A D T+ L+N + AG H+V S + L
Sbjct: 197 NVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMEL 256
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
A A + YN +I I+ L E ++++ K PD T++++ A K
Sbjct: 257 ARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQ 315
Query: 477 NDKVYALEQEKLQ 489
++ L QE Q
Sbjct: 316 LEEALTLFQEAEQ 328
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 159/349 (45%), Gaps = 5/349 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY LL + KS A V +EM +G P Y ++ CR +D+A
Sbjct: 173 QPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKE 232
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
LN++ + QPD+ +Y+T++K A R++ ++ L+ +M ++ PN VT ++++ +
Sbjct: 233 ILNRLSSY-GFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFF 291
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ GM ++ +VL M + C P+ N +++ +G+VD + +G +P+
Sbjct: 292 CRGGMVERAIQVLQQMSQHG-CTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 350
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T ++ ++ + ++ ++ M + P T+N I G + E
Sbjct: 351 TISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIE 410
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
M G T+ L++G+ G +V S++ L + L N Y +++ A+
Sbjct: 411 LMPEYGCSVGIVTYNALVHGFCVQG---RVDSALELFNNLPCEPNTITYTTLLTGLCHAE 467
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
L + M +K C ++ TF+++ + ++G ++ L + ++
Sbjct: 468 RLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMME 516
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 161/391 (41%), Gaps = 43/391 (10%)
Query: 122 KQWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
++W +F EM+ ++ P E T+ L+ + G E A +V +M + G P
Sbjct: 260 RRWDDVKVLFAEMVDKKCV--PNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTT 317
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
L ++ A C+ +D+A+ LN M + C PD +Y+T+++ A R+E + L +
Sbjct: 318 LCNIVINAICKQGRVDDAYDFLNNMG-MYGCNPDTISYTTVLRGLCRAGRWEHAKELLPE 376
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M ++ PN VT N + + G+ +Q +++ M E C + T N ++ F +G
Sbjct: 377 MVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYG-CSVGIVTYNALVHGFCVQG 435
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+VD E F N +P T T+ L+ D + ++ M + P + T+N
Sbjct: 436 RVD---SALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFN 492
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVIS- 412
++ F G + QM G + TF L++G L H ++S
Sbjct: 493 VLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSK 552
Query: 413 ------------------------SVRLASKLQ---IAENVSFYNAVISACIKADDLMEM 445
++++ +Q + V YN ++ A K + +
Sbjct: 553 GVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQA 612
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ M C P+ T+ I+ E A EG+
Sbjct: 613 IDFFAYMVSNGCMPNESTYIILIEGLAHEGL 643
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 129/335 (38%), Gaps = 5/335 (1%)
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
KL+ L + G+ A +V G Y L+A YCR +D A + M
Sbjct: 79 KLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMPV- 137
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
PD YTY+ +I+ D R L DM +R P+ VT ++L K+ F +
Sbjct: 138 ---PPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGE 194
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
VL M + C P++ T N I++ +G+VD + + ++G P+ ++ ++
Sbjct: 195 AMNVLDEM-RAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVL 253
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
R +D + + M + T++ ++ F G + +QM G
Sbjct: 254 KGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCT 313
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
+T +IN G + + Y V+ +A + +
Sbjct: 314 PNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKEL 373
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
M K+C P+ TF+ ++G+ ++ L
Sbjct: 374 LPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKL 408
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 136/337 (40%), Gaps = 5/337 (1%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y L+ + G+ + AR++ M + P YT ++ C + +A L+ M
Sbjct: 112 YNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDML 168
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
CQP V TY+ L++A + F + +M + TPN VT N+++ G + G
Sbjct: 169 Q-RGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRV 227
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
D + +L+ L S +PD+ + T+L + D ++ + + + P TF++
Sbjct: 228 DDAKEILN-RLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 286
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
L+ + + M ++ V++ M + ++ N VI A G M G
Sbjct: 287 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 346
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
DT ++ ++ G AG + + + N +N I + + +
Sbjct: 347 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 406
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
++ + M E C T++ + + +G D L
Sbjct: 407 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALEL 443
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 123/301 (40%), Gaps = 43/301 (14%)
Query: 123 QWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
+W A ++ EM+++ P E T+ + +L + G E A K+ M E G
Sbjct: 366 RWEHAKELLPEMVRKN--CPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVT 423
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y AL+ +C +D A N + C+P+ TY+TL+ A R + L M
Sbjct: 424 YNALVHGFCVQGRVDSALELFNNLP----CEPNTITYTTLLTGLCHAERLDAAAELLAGM 479
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV------ 295
++ N VT N+++ + + G ++ +++ M+E C P++ T NT+L
Sbjct: 480 IQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHG-CTPNLITFNTLLDGITKDCN 538
Query: 296 ----------FANKGQ----------VDMMER---------WYEKFRNFGIDPETRTFNI 326
+KG VD++ R ++ G+ P+ +N
Sbjct: 539 SEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNK 598
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
++ A K+ D+ YM STY +IE + G K Y +++A+G
Sbjct: 599 ILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKG 658
Query: 387 M 387
+
Sbjct: 659 V 659
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/277 (19%), Positives = 103/277 (37%), Gaps = 39/277 (14%)
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
PDVY + LI+ R + + + + N ++ GY + G D R+
Sbjct: 72 PDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRL 131
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
++ M PD +T I+ ++G+V + G P T+ +L+ A
Sbjct: 132 IASM----PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVC 187
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K + + +V++ MR TYN +I M EG D K
Sbjct: 188 KSSGFGEAMNVLDEMRAKGCTPNIVTYNVIING----------------MCREGRVDDAK 231
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
++N ++ G ++S Y V+ A +++ ++ M
Sbjct: 232 E---ILNRLSSYGFQPDIVS----------------YTTVLKGLCAARRWDDVKVLFAEM 272
Query: 453 KEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+K C P+ TF ++ + + GM ++ + Q+ Q
Sbjct: 273 VDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQ 309
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 170/427 (39%), Gaps = 50/427 (11%)
Query: 108 VNTVAETFSDHVLKKQWF------QALQVFEMLKEQ-PFYQPKEGTYMKLLVLLGKSGQP 160
+ V + FS +L K QA + M+ E P Y ++ K G
Sbjct: 176 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDV 235
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM---KTLPNCQPDVYT 217
A +F EMV+ GI P Y +++ A C+ +D+A L QM + LPN +T
Sbjct: 236 NKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN----NWT 291
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y+ LI +++ ++++M S+ P+ VT ++++G K G + V M
Sbjct: 292 YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMA 351
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
PDV++ N +L+ +A KG + M ++ GI P+ TFN+LI AY M
Sbjct: 352 MKGQ-NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGML 410
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
DK + MR TY VI A +G F QM +G+ D + CL
Sbjct: 411 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 470
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME----------- 446
I G+ G K + + ++ F++++I+ K +M+ +
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 530
Query: 447 ------------------------RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
RV+ M P+ + + Y K G D+ +
Sbjct: 531 HPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLS 590
Query: 483 LEQEKLQ 489
L +E LQ
Sbjct: 591 LFREMLQ 597
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 159/381 (41%), Gaps = 58/381 (15%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ ++ +PELA F +++ G+ + LL +C DEA
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 168
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRF----ELIET--------------------- 236
L C PDV++YS L+K+ D + +L+
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 228
Query: 237 ------------LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
L+++M +R + P+ VT N V+ KA D+ E L M+ P
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL-P 287
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA---YGK----KRMY 337
+ WT N ++ +++ GQ R +++ R I P+ T ++L+G+ YGK + ++
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 347
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
D M+ K Q P S YN ++ ++ G M F+ M +G+ D TF L
Sbjct: 348 DTMAM------KGQNPDVFS-YNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVL 400
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI---KADDLMEMERVYKRMKE 454
I YAN G+ K + + +V Y VI+A K DD ME + +M +
Sbjct: 401 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK---FNQMID 457
Query: 455 KHCRPDSETFSIMTEAYAKEG 475
+ PD ++ + + + G
Sbjct: 458 QGVAPDKYAYNCLIQGFCTHG 478
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 150/365 (41%), Gaps = 5/365 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
QW +A++VF+ ++ P T L+ L K G+ + AR VF+ M +G P Y
Sbjct: 304 QWKEAVRVFKEMRRHSIL-PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 362
Query: 183 TALLAAYC-RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+L Y + L+D L + PD YT++ LIKA + + ++ +M
Sbjct: 363 NIMLNGYATKGCLVD--MTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM 420
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ V P+ VT V+ + G D + M++ PD + N ++ F G
Sbjct: 421 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV-APDKYAYNCLIQGFCTHGS 479
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ + + N G+ + F+ +I K ++ + + + Y+
Sbjct: 480 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSM 539
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+++ + +G + F+ M + G++ + +C L+NGY G + +S R +
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRG 599
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
I + Y+ +I +A + + + M E D T++I+ K D+
Sbjct: 600 IKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAI 659
Query: 482 ALEQE 486
L +E
Sbjct: 660 FLFKE 664
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 7/199 (3%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+ L +F EML Q +P Y ++ L ++G+ A+ F+EM E GI Y
Sbjct: 587 EGLSLFREML--QRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNI 644
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
+L +N DEA +++ + N + ++ T +T+I R E + L+ +
Sbjct: 645 VLRGLFKNRCFDEAIFLFKELRAM-NVKINIITLNTMIDGMFQTRRVEEAKDLFASISRS 703
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ P+ VT +I++ K G+ ++ E + S M ++A C+P+ +N ++ K ++
Sbjct: 704 RLVPSVVTYSIMITNLIKEGLVEEAEDMFSSM-QNAGCEPNSRLLNHVVRELLKKNEIVR 762
Query: 305 MERWYEKF--RNFGIDPET 321
+ K RNF ++ T
Sbjct: 763 AGAYLSKIDERNFSLEHLT 781
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/430 (20%), Positives = 178/430 (41%), Gaps = 74/430 (17%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A ++ E L+E+ P ++ +L LGK + + A +F E++++ EP Y ++
Sbjct: 338 AYKLLERLRERGCI-PSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIII 395
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
C ++EA+ L++M+ + P++ T + ++ A + E +++ +R
Sbjct: 396 DMLCLGGRVEEAYRILDEMEH-ASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGC 454
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA-------------------------- 280
P+ VT ++ G GK G D+ R+ ML++
Sbjct: 455 NPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHK 514
Query: 281 --------TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
CKPD+ +NT + G+V+ +E R++G P+ R+++ILI
Sbjct: 515 IFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLT 574
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY--------------- 377
K + S++ M++ F + YN V++ F G H Y
Sbjct: 575 KAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKV-HKAYEILEEMKEKCVQPTV 633
Query: 378 ---------------------TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
FE+ ++G++ + + LI+G+ G + +
Sbjct: 634 ATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 693
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
K + NV +N+++ A +KA+++ E ++ MKE C P++ T+SI+ +
Sbjct: 694 MMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQK 753
Query: 477 NDKVYALEQE 486
+K + Q+
Sbjct: 754 YNKAFVFWQD 763
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 165/387 (42%), Gaps = 55/387 (14%)
Query: 112 AETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMV 171
A D VL A+ V LK ++P Y L+ L ++ +PE A ++ +M
Sbjct: 157 ARRLDDAVL------AVAVMRRLK----FRPAFSAYTVLIGALAEARRPERALELLRQMQ 206
Query: 172 EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNC-QPDVYTYSTLIKACVDAMR 230
E G E L+T L+ A R + +A ++++K +C +PD+ Y+ I A
Sbjct: 207 EVGYEVGVHLFTTLVRALAREGQVADALALVDEVKG--SCLEPDIVLYNVCIDCFGKAGN 264
Query: 231 FELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMN 290
++ + ++ + + P+ V+ ++ KAG + E + + M E+ P + N
Sbjct: 265 VDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQM-EAERSVPCAYAYN 323
Query: 291 TILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
T++ + + G+ + + E+ R G P +FN ++ GKKR D+ S+ E M+K
Sbjct: 324 TMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD 383
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
P SSTYN +I+ G + ++M +A LF +
Sbjct: 384 AEP-NSSTYNIIIDMLCLGGRVEEAYRILDEME-------------------HASLFPNL 423
Query: 411 ISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
++ N ++ KA L E ++++ ++ C PD T+ + +
Sbjct: 424 LT----------------VNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDG 467
Query: 471 YAKEGMNDKVYALEQEKLQMLLEASGH 497
K+G D+ Y L ++ L +GH
Sbjct: 468 LGKKGQVDEAYRLFEKMLD-----AGH 489
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 163/394 (41%), Gaps = 43/394 (10%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A ++FE Q P TY L+ LGK GQ + A ++F +M++ G P +YT+L
Sbjct: 441 EAYKIFES-ASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSL 499
Query: 186 LAAY--------------------CR------NSLIDEAF---------VTLNQMKTLPN 210
+ + C+ N+ +D F + +++
Sbjct: 500 IRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSY-G 558
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
PDV +YS LI A + ++ M ++ + N V+ G+ K+G +
Sbjct: 559 FLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAY 618
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
+L M E +P V T I+ A ++D +E+ ++ GI+ ++ LI
Sbjct: 619 EILEEMKEKCV-QPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDG 677
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
+GK D+ ++E M K T+N++++A + F+ M +
Sbjct: 678 FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPN 737
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
T T+ LING ++K + K + NV Y +IS K ++ + +++
Sbjct: 738 TYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFE 797
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
R K PD+ +F+ + EGM++ A+E
Sbjct: 798 RFKANGGIPDAASFNALI-----EGMSNANRAME 826
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 123/324 (37%), Gaps = 42/324 (12%)
Query: 165 KVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
KV EM G + L AA R +D+A + + M+ L +P Y+ LI A
Sbjct: 130 KVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRL-KFRPAFSAYTVLIGA 188
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-MFDQMERVLSGMLESATCK 283
+A R E L + M E ++ + G + D + L ++ + +
Sbjct: 189 LAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADAL--ALVDEVKGSCLE 246
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
PD+ N + F G VDM +++ + + G+ P+
Sbjct: 247 PDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPD----------------------- 283
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+Y ++I G E F QM AE + +I GY +
Sbjct: 284 ------------DVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGS 331
Query: 404 AGLFHKVISSV-RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
AG F + RL + I VSF N++++ K + E +++ MK K P+S
Sbjct: 332 AGRFEDAYKLLERLRERGCIPSVVSF-NSILTCLGKKRKVDEALSLFEVMK-KDAEPNSS 389
Query: 463 TFSIMTEAYAKEGMNDKVYALEQE 486
T++I+ + G ++ Y + E
Sbjct: 390 TYNIIIDMLCLGGRVEEAYRILDE 413
Score = 42.0 bits (97), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 63/171 (36%)
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+E+ E+ G + L A + R D + MR+L+F S Y +I
Sbjct: 128 LEKVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIG 187
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
A ++ + QM G + F L+ A G ++ V +
Sbjct: 188 ALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEP 247
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++ YN I KA ++ + + +K + +PD +++ M K G
Sbjct: 248 DIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAG 298
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/515 (22%), Positives = 205/515 (39%), Gaps = 55/515 (10%)
Query: 7 SASLSFSSSLLPSPLPHPHDT-KTNKHRAQVPNFNLIHCSVTSTNK--HTSFSSESAVAA 63
SA +F+SS HP+ + T K A P NL + + N H S +S +
Sbjct: 13 SALPTFASS-------HPYPSLPTPKTAAPKPRLNLAYAGAVAPNAVPHRSAASNDRLRV 65
Query: 64 KKRLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKL---ERKAKAKAWVNTV-AETFSDHV 119
R E + E+ S P L KKL R A+A+ + + + S +
Sbjct: 66 LVRRGDLEEAIRLVESMAGLEPSAAGPCAALIKKLCASGRTAEARRVLASCEPDVMSYNA 125
Query: 120 LKKQWFQALQV---FEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIE 176
+ + Q+ ++ P +P TY L+ L G+ + A V ++M+ G
Sbjct: 126 MVAGYCVTGQLDNARRLVAAMPM-EPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCV 184
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
P YT LL A C+ S +A L++M+ C PD+ TY+ ++ R +
Sbjct: 185 PDVVTYTILLEATCKRSGYKQAVKLLDEMRD-KGCAPDIVTYNVVVNGICQEGRVDDAME 243
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
+ + PNTV+ NIVL G A ++ E++++ M P+V T N ++S
Sbjct: 244 FLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGR-PPNVVTFNMLISFL 302
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ-FPWT 355
+G V+ ++ +G P + ++N ++ A+ K++ D+ + +E M +P
Sbjct: 303 CRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDI 362
Query: 356 SS----------------------------------TYNNVIEAFSDMGDAKHMEYTFEQ 381
S +YN VI+ + G + +
Sbjct: 363 VSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNE 422
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M +G++ D T+ + +G G + I + + I N YNA++ K
Sbjct: 423 MVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRA 482
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
++ M C P+ T++I+ E A EG+
Sbjct: 483 THSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGL 517
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 146/342 (42%), Gaps = 10/342 (2%)
Query: 145 GTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQ 204
G L+ L SG+ AR+V EP Y A++A YC +D A +
Sbjct: 91 GPCAALIKKLCASGRTAEARRVL-----ASCEPDVMSYNAMVAGYCVTGQLDNARRLVAA 145
Query: 205 MKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG 264
M +PD YTY+TLI+ R + + DM R P+ VT I+L K
Sbjct: 146 MPM----EPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRS 201
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
+ Q ++L M + C PD+ T N +++ +G+VD + + ++G +P T ++
Sbjct: 202 GYKQAVKLLDEMRDKG-CAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSY 260
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
NI++ ++ +M M + P T+N +I G + +Q+
Sbjct: 261 NIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPK 320
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
G ++ ++ +++ + + ++ V L ++ YN +++A + ++
Sbjct: 321 YGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDA 380
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ ++K+K C P +++ + + K G ++ L E
Sbjct: 381 AVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNE 422
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 171/380 (45%), Gaps = 23/380 (6%)
Query: 129 QVFEMLKEQPF--YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+ +E+L+E + + P E TY LL K G A + EMV G+ P+ YTAL+
Sbjct: 302 EAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALI 361
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+ C+ ++ A +QM+ + +P+ TY+TLI + +M E
Sbjct: 362 NSMCKARNLNRAMEFFDQMR-IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGF 420
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
+P+ VT N + G+ ++ V+ M+E PDV + +TI+S F KG++D
Sbjct: 421 SPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGL-APDVVSYSTIISGFCRKGELDRAF 479
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ ++ G+ P+ T++ LI + R + + + M + P TY +I A+
Sbjct: 480 QMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAY 539
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVI------SS 413
GD + ++M +G D T+ LING L K+I S
Sbjct: 540 CVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSD 599
Query: 414 VRLASKLQIAENVSFYNAVI---SACIKADDLM-EMERVYKRMKEKHCRPDSETFSIMTE 469
V + ++ N+ F + V C+K LM E +RV++ M E++ +P ++++
Sbjct: 600 VTYDTLIENCSNIEFKSVVALIKGFCMKG--LMHEADRVFESMVERNHKPGEAVYNVIIH 657
Query: 470 AYAKEGMNDKVYALEQEKLQ 489
+ + G K + L +E +
Sbjct: 658 GHCRGGNLPKAFNLYKEMIH 677
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 157/359 (43%), Gaps = 6/359 (1%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
EM++ + P TY L+ G+ + F EM G P Y L+ AYC+
Sbjct: 204 EMIRSR--VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCK 261
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNT 250
IDEAF L M + QP++ +Y+ +I C + E E L ++M + TP+
Sbjct: 262 MGRIDEAFGLLKSMSS-KGMQPNLISYNVIINGLCREGSMKEAWEIL-EEMGYKGFTPDE 319
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYE 310
VT N +L GY K G F Q + + M+ + P V T +++ ++ +++
Sbjct: 320 VTYNTLLNGYCKEGNFHQALVIHAEMVRNGV-SPSVVTYTALINSMCKARNLNRAMEFFD 378
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
+ R G+ P RT+ LI + ++ + ++ ++ M + F + TYN I +
Sbjct: 379 QMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLE 438
Query: 371 DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYN 430
+ ++M +G+ D ++ +I+G+ G + + + ++ + Y+
Sbjct: 439 RMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYS 498
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
++I + L E + + M + PD T++ + AY EG +K L E +
Sbjct: 499 SLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIH 557
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 153/369 (41%), Gaps = 5/369 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKS-GQPEL-ARKVFNEMVEEGIEPTPELYT 183
QA+ + K F P +Y +L + +S G +L A +V+ EM+ + P Y
Sbjct: 160 QAVNTINLAKSSGF-MPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYN 218
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
L+ +C + + +M+ C P+V TY+TLI A R + L + M
Sbjct: 219 ILIRGFCSVGELQKGLGCFGEMER-NGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSS 277
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+ + PN ++ N+++ G + G + +L M PD T NT+L+ + +G
Sbjct: 278 KGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGF-TPDEVTYNTLLNGYCKEGNFH 336
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ + G+ P T+ LI + K R ++ + MR TY +I
Sbjct: 337 QALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLI 396
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
+ FS G +M G T+ I+G+ + + V+ + +A
Sbjct: 397 DGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLA 456
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+V Y+ +IS + +L ++ + M EK PD+ T+S + + + + L
Sbjct: 457 PDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDL 516
Query: 484 EQEKLQMLL 492
QE L M L
Sbjct: 517 SQEMLDMGL 525
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 75/189 (39%), Gaps = 18/189 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E TY L+ G A + +EM+ +G P Y+ L+ + + EA
Sbjct: 527 PDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRL 586
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL----------------YQDMDERS 245
L ++ + DV TY TLI+ C + + F+ + L ++ M ER+
Sbjct: 587 LFKLIYEESVPSDV-TYDTLIENCSN-IEFKSVVALIKGFCMKGLMHEADRVFESMVERN 644
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P N+++ G+ + G + + M+ S V + I ++F +M
Sbjct: 645 HKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMS 704
Query: 306 ERWYEKFRN 314
E + R+
Sbjct: 705 EVIGDTLRS 713
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 154/363 (42%), Gaps = 7/363 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QA+QV + Y P T L+ K A K+FNEM +G +P Y L
Sbjct: 199 QAMQVLGRQLQSKCY-PDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVL 257
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPN--CQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
+ +C+ +DEA + +K LP+ CQPDV +++ ++++ R+ L M
Sbjct: 258 IKGFCKGGRLDEA---IRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLR 314
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+ P+ VT NI++ + G+ + VL M+ P+ + N ++ F N +D
Sbjct: 315 KGCLPSVVTFNILINFLCQKGLLGKALNVLE-MMPKHGHTPNSRSFNPLIQGFCNGKGID 373
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ E + G P+ T+NIL+ A K D ++ + + +YN VI
Sbjct: 374 RAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVI 433
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
+ +G A+ E+M +G+K D T ++ G + G + + + I
Sbjct: 434 DGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIR 493
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
N YN++I+ K+ M K C+P T++ + + EG+ + L
Sbjct: 494 PNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKL 553
Query: 484 EQE 486
E
Sbjct: 554 SNE 556
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 150/356 (42%), Gaps = 42/356 (11%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPN----- 210
K G+ + A ++ + E G Y L++ YC++ I+EA L++M PN
Sbjct: 126 KIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRMGVSPNAATYD 185
Query: 211 --------------------------CQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
C PDV T + LI A L+ +M +
Sbjct: 186 AVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNK 245
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ-VD 303
P+ VT N+++ G+ K G D+ R L L S C+PDV + N IL + G+ +D
Sbjct: 246 GCKPDVVTYNVLIKGFCKGGRLDEAIRFLK-KLPSYGCQPDVISHNMILRSLCSGGRWMD 304
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
M+ R G P TFNILI +K + K +V+E M K S ++N +I
Sbjct: 305 AMKLLATMLRK-GCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLI 363
Query: 364 EAFSD-MGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ- 421
+ F + G + +EY E M + G D T+ L+ G KV +V + S+L
Sbjct: 364 QGFCNGKGIDRAIEY-LEIMVSRGCYPDIVTYNILLTALCKDG---KVDDAVVILSQLSS 419
Query: 422 --IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ ++ YN VI +K + + M K +PD T + + ++EG
Sbjct: 420 KGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREG 475
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 135/361 (37%), Gaps = 43/361 (11%)
Query: 167 FNEMVEEGIEPTPE-LYTAL---------LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
F++ G+E +P+ + T+L L RN ++E L M T PDV
Sbjct: 57 FSKGALNGVESSPDRVNTSLNFEESEIRHLRRLIRNGELEEGSRFLEYM-TNKGKSPDVI 115
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS-- 274
+ LI+ R + + ++E + + N+++ GY K+G ++ RVL
Sbjct: 116 ACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRM 175
Query: 275 -------------------GMLESAT----------CKPDVWTMNTILSVFANKGQVDMM 305
G L+ A C PDV T ++ + V
Sbjct: 176 GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQA 235
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ + + RN G P+ T+N+LI + K D+ ++ + ++N ++ +
Sbjct: 236 MKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRS 295
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
G M +G TF LIN GL K ++ + + K N
Sbjct: 296 LCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPN 355
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALE 484
+N +I + + M + C PD T++I+ A K+G ++D V L
Sbjct: 356 SRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILS 415
Query: 485 Q 485
Q
Sbjct: 416 Q 416
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/229 (18%), Positives = 89/229 (38%), Gaps = 15/229 (6%)
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV----------FANKGQVDMMERWYE 310
G G ER G L PD +NT L+ G+++ R+ E
Sbjct: 46 GLKGNLQHSERFSKGALNGVESSPD--RVNTSLNFEESEIRHLRRLIRNGELEEGSRFLE 103
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
N G P+ LI + K S +M + + ++YN +I + G
Sbjct: 104 YMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSG 163
Query: 371 DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYN 430
+ + ++M G+ + T+ ++ + G + + + + + +V
Sbjct: 164 EIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCT 220
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+I A K + + +++ M+ K C+PD T++++ + + K G D+
Sbjct: 221 VLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDE 269
>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 712
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 173/401 (43%), Gaps = 53/401 (13%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE-GIEPTPELYTA 184
+++ +F+ +K+ P T+ LL +L K G+ +A +F+EM G+ P +
Sbjct: 159 ESVNLFQTMKKMGI-SPSVLTFNSLLSILLKRGRTGMAHDMFDEMRRTYGVTPDSYTFNT 217
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTY-------------------------- 218
L++ +C+NS++D+AF +M+ L +C PDV TY
Sbjct: 218 LISGFCKNSMVDQAFTIFKEME-LYSCNPDVVTYNTIIDGLCRAGKVKIAHNLLNGMLKK 276
Query: 219 -----------STLIKACVDAMRFELIETL--YQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+TL++ M+ E+ E L + +M R + PN VT N ++ G +A
Sbjct: 277 ATAVHPNIVSYTTLLRGY--CMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEAHR 334
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+D+++ L G T PD T N ++ + G +D + +++ N + P++ +++
Sbjct: 335 YDEIKGFLIGGDAFTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYS 394
Query: 326 ILIGAYGKKRMYDKMSSVME-------YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
+LI + +DK ++ + K + ++ YN + E G AK E
Sbjct: 395 VLIRTLCLRNEFDKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKV 454
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
F Q+ G + D ++ LI G G F + L + + + Y +I +K
Sbjct: 455 FRQLMKRGAQ-DPSSYRTLITGLCREGKFKAAYELLVLMLRREFVPDPETYEVLIDGLLK 513
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETF-SIMTEAYAKEGMND 478
+ + +RM P + TF S++ E ++ ND
Sbjct: 514 IGEALLAHDTLQRMLRSSYLPVATTFHSVLAELVKRKFAND 554
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 151/339 (44%), Gaps = 12/339 (3%)
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
G +G + + +F M + GI P+ + +LL+ + A ++M+ PD
Sbjct: 152 GNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMRRTYGVTPD 211
Query: 215 VYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
YT++TLI C ++M + T++++M+ S P+ VT N ++ G +AG +L
Sbjct: 212 SYTFNTLISGFCKNSMVDQAF-TIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKIAHNLL 270
Query: 274 SGMLESATC-KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
+GML+ AT P++ + T+L + K ++D + + G+ P T+N LI
Sbjct: 271 NGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLS 330
Query: 333 KKRMYDKMSSVMEYMRKL-QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
+ YD++ + F + T+N +I+A D G F++M + D+
Sbjct: 331 EAHRYDEIKGFLIGGDAFTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDS 390
Query: 392 KTF------CCLINGYANA-GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
++ CL N + A LF+++ L K + + YN + +
Sbjct: 391 ASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQ 450
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
E+V++++ ++ + D ++ + +EG Y L
Sbjct: 451 AEKVFRQLMKRGAQ-DPSSYRTLITGLCREGKFKAAYEL 488
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 105/250 (42%), Gaps = 19/250 (7%)
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
N ++ YG AG+F + + M + P V T N++LS+ +G+ M +++ R
Sbjct: 145 NSLIRSYGNAGLFQESVNLFQTM-KKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMR 203
Query: 314 -NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
+G+ P++ TFN LI + K M D+ ++ + M TYN +I+ G
Sbjct: 204 RTYGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKV 263
Query: 373 KHMEYTFEQM--HAEGMKADTKTFCCLINGYANAG-------LFHKVISSVRLASKLQIA 423
K M A + + ++ L+ GY +FH++++ +
Sbjct: 264 KIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTR-------GLK 316
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKE-KHCRPDSETFSIMTEAYAKEGMNDKVYA 482
N YN +I +A E++ PD+ TF+I+ +A+ G D
Sbjct: 317 PNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFSPDACTFNILIKAHCDAGHLDAAMK 376
Query: 483 LEQEKLQMLL 492
+ QE L M L
Sbjct: 377 VFQEMLNMKL 386
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 13/126 (10%)
Query: 368 DMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVS 427
++ A++ ++ E+ +K + F LI Y NAGLF + ++ + K+ I+ +V
Sbjct: 118 NLNAARNFLFSIEKRSNGCVKLQDRYFNSLIRSYGNAGLFQESVNLFQTMKKMGISPSVL 177
Query: 428 FYNAVISACIK------ADDLM-EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+N+++S +K A D+ EM R Y PDS TF+ + + K M D+
Sbjct: 178 TFNSLLSILLKRGRTGMAHDMFDEMRRTYG------VTPDSYTFNTLISGFCKNSMVDQA 231
Query: 481 YALEQE 486
+ + +E
Sbjct: 232 FTIFKE 237
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 76/182 (41%), Gaps = 3/182 (1%)
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
EK N + + R FN LI +YG ++ + ++ + M+K+ + T+N+++
Sbjct: 130 EKRSNGCVKLQDRYFNSLIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKR 189
Query: 370 GDAKHMEYTFEQMHAE-GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSF 428
G F++M G+ D+ TF LI+G+ + + + + +V
Sbjct: 190 GRTGMAHDMFDEMRRTYGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVT 249
Query: 429 YNAVISACIKADDLMEMERVYKRMKEK--HCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
YN +I +A + + M +K P+ +++ + Y + D+ + E
Sbjct: 250 YNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHE 309
Query: 487 KL 488
L
Sbjct: 310 ML 311
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 150/343 (43%), Gaps = 11/343 (3%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L K+ + + A ++ +EMV+ G+ P + +++ C+ + A
Sbjct: 8 PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L M NC+P TY+TLI + +TL + P+ VT +I+ G
Sbjct: 68 LAVMAE-RNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLC 126
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G D+ ++ M C P++ T NT++ + + E + G P+
Sbjct: 127 KRGRIDEAFELVKEM-SGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDV 185
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+ I++ K+ DK ++E M K + TY ++E G + F++
Sbjct: 186 VTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKE 245
Query: 382 MHAEGMKADTKTFCCLINGYANAGL---FHKVISSVRLASKLQIAENVSFYNAVISACIK 438
M ++ AD + L+NGY + KV+ +R + + YNA++ K
Sbjct: 246 MVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDV------YNALMDGYCK 299
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
L E+ V++ M + C P+ +T++I+ + K G D+ +
Sbjct: 300 EGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAF 342
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 150/362 (41%), Gaps = 13/362 (3%)
Query: 117 DHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIE 176
D + K F+ + + +P TY L+ L K + A+ + +E V G
Sbjct: 53 DGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFV 112
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMR----FE 232
P Y+ L C+ IDEAF + +M C P++ TY+TLI A + +E
Sbjct: 113 PDVVTYSILADGLCKRGRIDEAFELVKEMSG-NGCTPNLVTYNTLIDGLCKASKTEKAYE 171
Query: 233 LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTI 292
L+ETL P+ VT I++ G K G D+ +++ GML+ C P V T +
Sbjct: 172 LLETLVS----SGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRG-CTPSVITYTAL 226
Query: 293 LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF 352
+ G+VD +++ + + + L+ Y K + V++ +R
Sbjct: 227 MEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT-- 284
Query: 353 PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVIS 412
P+ YN +++ + G + FE M G + KT+ +++G G +
Sbjct: 285 PYID-VYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFP 343
Query: 413 SVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
+ +V YN +I KA E +V +M + PD+ T++ + +
Sbjct: 344 FLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFC 403
Query: 473 KE 474
KE
Sbjct: 404 KE 405
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 169/433 (39%), Gaps = 75/433 (17%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A ++ E L F P TY ++ L K G+ + A K+ M++ G P+ YTAL
Sbjct: 168 KAYELLETLVSSGFV-PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTAL 226
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-C-----------VDAM---- 229
+ CR +DEA +M + +C D Y +L+ C VD +
Sbjct: 227 MEGLCRTGRVDEAHHIFKEMVS-KDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTP 285
Query: 230 ----------------RFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
R + I +++DM R PN T NIV+ G K G D+ L
Sbjct: 286 YIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFL 345
Query: 274 SGMLESATCKPDV-----------------------------------WTMNTILSVFAN 298
M SA C PDV T NT+++ F
Sbjct: 346 ESM-HSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCK 404
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+ + D + G+DP+ T+N LI G R+ D + E +R +
Sbjct: 405 EERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACT 464
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
TYN +I+ G K + M G++A+T T+ I+ G + +S L+
Sbjct: 465 TYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDE--ASSLLS 522
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE-KHCRPDSETFSIMTEAYAKEGM 476
+ + VS+ +I C KA+ L ++ + M K S TF+++ +A+ K
Sbjct: 523 EMDTLRDEVSYTTVIIGLC-KAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKR 581
Query: 477 NDKVYALEQEKLQ 489
D+ L + +Q
Sbjct: 582 LDEALTLLELMVQ 594
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/428 (20%), Positives = 163/428 (38%), Gaps = 55/428 (12%)
Query: 102 AKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPE 161
A A A+V+ V + + + +A +V + ++ P+ Y L+ K G+ +
Sbjct: 253 ADALAYVSLV----NGYCKSSRTKEAQKVVDGIRGTPYID----VYNALMDGYCKEGRLD 304
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY----- 216
VF +M G P + Y ++ C++ +DEAF L M + C PDV
Sbjct: 305 EIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHS-AGCVPDVVSYNII 363
Query: 217 ------------------------------TYSTLIKACVDAMRFELIETLYQDMDERSV 246
TY+TL+ RF+ + ++M + V
Sbjct: 364 IDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGV 423
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P+ VT N ++ G + ++ ML + T NTI+ +G +
Sbjct: 424 DPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQAL 483
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ G++ T T+NI I K+ D+ SS++ M L+ +Y VI
Sbjct: 484 LLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR---DEVSYTTVIIGL 540
Query: 367 SDMGDAKHMEYTFEQMHA-EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+M A +G+ + TF LI+ + + ++ + L + + +
Sbjct: 541 CKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPS 600
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
V YN VI+ K D + + ++ M + S +++++ +G +
Sbjct: 601 VITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRG-------K 653
Query: 486 EKLQMLLE 493
E LQ+L E
Sbjct: 654 EALQVLEE 661
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 97/246 (39%), Gaps = 1/246 (0%)
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M+ER V P+ T NI++ G KA D+ +L M++ PD T N+I+ G
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGV-TPDTVTFNSIMDGLCKAG 59
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+ + P T+N LI K++ D+ ++++ F TY+
Sbjct: 60 KFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYS 119
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+ + G ++M G + T+ LI+G A K +
Sbjct: 120 ILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSS 179
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+V Y ++ K L + ++ + M ++ C P T++ + E + G D+
Sbjct: 180 GFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEA 239
Query: 481 YALEQE 486
+ + +E
Sbjct: 240 HHIFKE 245
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 83/206 (40%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
PDV+T N ++ + D + + G+ P+T TFN ++ K +++ S+
Sbjct: 8 PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ M + + TYN +I + + ++ + G D T+ L +G
Sbjct: 68 LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCK 127
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
G + V+ S N+ YN +I KA + + + + PD T
Sbjct: 128 RGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVT 187
Query: 464 FSIMTEAYAKEGMNDKVYALEQEKLQ 489
++I+ + KEG DK + + L+
Sbjct: 188 YTIIVDGLCKEGRLDKALKMVEGMLK 213
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 110/317 (34%), Gaps = 69/317 (21%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P +Y ++ L K+ +P+ AR+V ++M++ GI P Y L+A +C+ D+A
Sbjct: 355 PDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGI 414
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMR----FELIE------------TLYQDMDER- 244
L M PD TY+TLI R +EL+ T Y + +R
Sbjct: 415 LKNMIK-AGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRL 473
Query: 245 -------------------SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM--------- 276
V NTVT NI + K G D+ +LS M
Sbjct: 474 CKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSY 533
Query: 277 --LESATCKPDVW---------------------TMNTILSVFANKGQVDMMERWYEKFR 313
+ CK + T N ++ F ++D E
Sbjct: 534 TTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMV 593
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
G P T+N++I K DK + + M +S +Y +I G K
Sbjct: 594 QRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGK 653
Query: 374 HMEYTFEQMHAEGMKAD 390
E+M + + D
Sbjct: 654 EALQVLEEMASSDCEID 670
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 82/180 (45%), Gaps = 7/180 (3%)
Query: 144 EGTYMKLLVLLGKSGQPELARKVFNEMVE-EGIEPTPELYTALLAAYCRNSLIDEAFVTL 202
E +Y +++ L K+ Q + A K+ EMV +G+ T + L+ A+ + +DEA TL
Sbjct: 530 EVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEAL-TL 588
Query: 203 NQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGK 262
++ C P V TY+ +I + + L+ +M R + ++V+ +++ G
Sbjct: 589 LELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCG 648
Query: 263 AGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ----VDMMERWYEKFRNFGID 318
G + +VL M S+ C+ D + +G+ +++ R K + +D
Sbjct: 649 QGRGKEALQVLEEM-ASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRMTTKMDSLSLD 707
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 166/369 (44%), Gaps = 9/369 (2%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A ++F+ ++++ P TY ++ L ++G+ A K+F+EMV + +EP YTAL+
Sbjct: 277 AYRLFDEMQKRKI-SPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALI 335
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
YC+ + EAF NQM + P++ TY+ L + L +M + +
Sbjct: 336 DGYCKEGKMKEAFSLHNQMLQM-GLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGL 394
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
N T N ++ G KAG DQ +++ M E A PD T T++ + + M
Sbjct: 395 ELNIYTYNSLVNGLCKAGNIDQAVKLMKDM-EVAGFHPDAVTYTTLMDAYCKSRE---MV 450
Query: 307 RWYEKFRNF---GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
R +E R + P TFN+L+ + M + ++++M + ++TYN++I
Sbjct: 451 RAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLI 510
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
+ + + + + M A+G+ D T+ LI G+ A + R
Sbjct: 511 KQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFN 570
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
VS YNA+I K +E ++++M+ + D E ++I + EG + L
Sbjct: 571 LTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLEL 630
Query: 484 EQEKLQMLL 492
E ++ L
Sbjct: 631 CDEAIEKCL 639
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 161/355 (45%), Gaps = 7/355 (1%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
LK +W L++ E ++ + +P TY +++LL K+G+ A +V EM+ EGI P
Sbjct: 202 LKGEW--VLKLIEEMQIKGL-KPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDG 258
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+YT L+ +C+ + A+ ++M+ PD TY+ +I R + L+
Sbjct: 259 VIYTTLIDGFCKLGNVSSAYRLFDEMQK-RKISPDFITYTAVICGLCQTGRVMEADKLFH 317
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
+M + + P+ VT ++ GY K G + + + ML+ P++ T +
Sbjct: 318 EMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGL-TPNIVTYTALADGLCKC 376
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G+VD + G++ T+N L+ K D+ +M+ M F + TY
Sbjct: 377 GEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTY 436
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+++A+ + QM ++ TF L+NG+ +G+ ++ +
Sbjct: 437 TTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLE 496
Query: 420 LQIAENVSFYNAVISA-CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
I N + YN++I CI+ +++ +Y+ M K PD T++I+ + + K
Sbjct: 497 KGIMPNATTYNSLIKQYCIR-NNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCK 550
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 103/246 (41%), Gaps = 1/246 (0%)
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
A++ E + L ++M + + PN T N V+ K G + ERVL M+ S PD
Sbjct: 201 ALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMI-SEGIAPDGV 259
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T++ F G V R +++ + I P+ T+ +I + + + M
Sbjct: 260 IYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEM 319
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
+ TY +I+ + G K QM G+ + T+ L +G G
Sbjct: 320 VCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEV 379
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ + + N+ YN++++ KA ++ + ++ K M+ PD+ T++ +
Sbjct: 380 DTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTL 439
Query: 468 TEAYAK 473
+AY K
Sbjct: 440 MDAYCK 445
>gi|242050480|ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
gi|241926361|gb|EER99505.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
Length = 668
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 157/348 (45%), Gaps = 2/348 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P+ Y LL + G + A +V +EM + G+ P Y+ L+ AY R + A +
Sbjct: 296 KPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARI 355
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +M+ +P Y +S ++ D ++ + ++M V P+ N+++ +
Sbjct: 356 LLKEMEA-DGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTF 414
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
GK M E +PDV T NT++ G+ D +E+ R P
Sbjct: 415 GKYNCLGHAMDAFDRMREE-EIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPG 473
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T T+NI+I G++ ++ + +++ M++ TY +++ + G K E
Sbjct: 474 TTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIE 533
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
M A+G+K + L+N YA GL ++ V+ + ++ N++I+A +
Sbjct: 534 AMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDR 593
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
++E V + MKE RPD T++ + +A + DKV + +E +
Sbjct: 594 RVVEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMI 641
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 147/329 (44%), Gaps = 2/329 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E TY L+ ++G+ E AR + EM +G++P+ +++ +LA + +AF
Sbjct: 332 PDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAV 391
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L +M+ +PD + Y+ +I + M E + P+ VT N ++ +
Sbjct: 392 LREMQA-SGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHC 450
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G D+ + M ES C P T N ++++ + + + +E + + G+ P
Sbjct: 451 KGGRHDRAMELFEEMRES-NCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNI 509
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+ L+ YG+ Y + +E M+ + + Y+ ++ A++ G A H +
Sbjct: 510 ITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKA 569
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M A+G++ LIN + + S ++ + + +V Y ++ A I+ +
Sbjct: 570 MKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQ 629
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEA 470
++ +Y+ M C PD + +++ A
Sbjct: 630 FDKVPVIYEEMITSGCAPDRKARAMLRSA 658
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/365 (19%), Positives = 146/365 (40%), Gaps = 46/365 (12%)
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQP---ELARKVFNEMVEEGIEPTPELYTA 184
L++ +L+E F P +Y LL L + P L ++ ++ E +EP L++
Sbjct: 175 LRLLSLLREHDFL-PDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSD 233
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L++A+ R +L D A L + +
Sbjct: 234 LISAFARAALPDAALELLASAQAI------------------------------------ 257
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+TP + ++ G AG + E + + KP N +L + G +
Sbjct: 258 GLTPRSNAVTALISALGSAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKN 317
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
E+ ++ G+ P+ T+++L+ AY + ++ +++ M +S ++ ++
Sbjct: 318 AEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILA 377
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
F D GD + +M A G++ D + +I+ + + + + +I
Sbjct: 378 GFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEP 437
Query: 425 NVSFYNAVISACIKA---DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
+V +N +I A K D ME+ ++ M+E +C P + T++IM ++ + V
Sbjct: 438 DVVTWNTLIDAHCKGGRHDRAMEL---FEEMRESNCPPGTTTYNIMINLLGEQERWEGVE 494
Query: 482 ALEQE 486
A+ E
Sbjct: 495 AMLSE 499
>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
Length = 583
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 159/385 (41%), Gaps = 40/385 (10%)
Query: 127 ALQVFEMLKEQPF-YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE-GIEPTPELYTA 184
AL VF L P P + +++V+L +SG+ A ++F++M G P +
Sbjct: 126 ALAVFTALHCSPLSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSF 185
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQ-------------------------------- 212
L+++ +L+D + L++ C+
Sbjct: 186 LVSSCTCANLLDASATLLSKASEF-GCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQD 244
Query: 213 ----PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
PDV++++ +IK + + L + M+E +P+TVT NI++ G + +
Sbjct: 245 RVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSR 304
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
VL + C P+V T +++S + G+++ Y GI P T T+N+LI
Sbjct: 305 GHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLI 364
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
YGK V + M +L+ P T++++I+ + G + M ++
Sbjct: 365 NGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQ 424
Query: 389 ADTKTFCCLINGYANAGLFHKVISSV-RLASKLQIAENVSFYNAVISACIKADDLMEMER 447
+ TF +I+ + I + L + IA YN VI K + E
Sbjct: 425 PNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANL 484
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYA 472
+ K M+EK CRPD T++I+ Y
Sbjct: 485 IRKGMEEKGCRPDKYTYTILIIGYC 509
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 150/368 (40%), Gaps = 53/368 (14%)
Query: 94 LKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVL 153
L K E + +A+ + S + + + + +FE + Y P ++ ++
Sbjct: 203 LSKASEFGCRVEAYAYN--KLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKG 260
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
+ + GQ + A ++ M E G P + L+ CR + + L +++ C P
Sbjct: 261 VCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMP 320
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------MF 266
+V T++++I A + E +Y DM + PNTVT N+++ GYGK G ++
Sbjct: 321 NVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVY 380
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
QM R+ C PDV T ++++ + GQ+D R + I P TF+I
Sbjct: 381 QQMTRL--------RCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSI 432
Query: 327 LIGAYGKKRMYDKMSSVM-EYMRKLQFPWTSSTYNNVIEAFSDMGDA-------KHME-- 376
+I + K+ D+ ++ E + + YN VI+ G K ME
Sbjct: 433 IIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEK 492
Query: 377 --------YT------------------FEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
YT F +M G D+ T C I+ AG+ ++V
Sbjct: 493 GCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEV 552
Query: 411 ISSVRLAS 418
+RLAS
Sbjct: 553 DHVMRLAS 560
>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 830
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 177/413 (42%), Gaps = 46/413 (11%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
+ + W + L++ + ++ + + E T ++ G+ G + ARK E+ G +P
Sbjct: 264 MGRSWGRILELLDEMRSKGL-EFDEFTCSTVISACGREGMLDEARKFLAELKLNGYKPGT 322
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+Y ++L + + + EA L +M+ NC PD TY+ L V A + +
Sbjct: 323 VMYNSMLQVFGKAGIYTEALSILKEMED-NNCPPDSITYNELAATYVRAGFLDEGMAVID 381
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
M + V PN +T V+ YGKAG D R+ S M + C P+V+T N++L++ K
Sbjct: 382 TMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKM-KDLGCAPNVYTYNSVLAMLGKK 440
Query: 300 -----------------------------------GQVDMMERWYEKFRNFGIDPETRTF 324
G+ + + + + +N G +P+ TF
Sbjct: 441 SRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTF 500
Query: 325 NILIGAYGKKRMYDKMSSVMEY--MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
N LI +Y R ++ S Y M K F +TYN ++ A + GD K E + M
Sbjct: 501 NTLISSYA--RCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDM 558
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
+G K + ++ L++ Y+ AG + + Q+ + ++ + K L
Sbjct: 559 QTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHKCRHL 618
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
MER + ++++ +PD + M +++ +K+++ +E L + E
Sbjct: 619 RGMERAFDQLQKYGYKPDLVVINSMLSMFSR----NKMFSKAREMLHFIHECG 667
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 146/335 (43%), Gaps = 4/335 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR-NSLIDEAFV 200
P T+ +L + + G+ KV EM G EP + + L+++Y R S +D A +
Sbjct: 460 PNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKM 519
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+K+ P V TY+ L+ A ++ E++ QDM + PN + +++L Y
Sbjct: 520 YGEMVKS--GFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCY 577
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
KAG +E+V + + + +LS + + MER +++ + +G P+
Sbjct: 578 SKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHKCR-HLRGMERAFDQLQKYGYKPD 636
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
N ++ + + +M+ K ++ ++ + TYN +++ + + E +
Sbjct: 637 LVVINSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLK 696
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+ + D ++ +I G+ GL + I + + I + YN +S +
Sbjct: 697 GIQNSVPEPDVVSYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAGME 756
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
E V + M E +CRP T+ I+ + Y K G
Sbjct: 757 LFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAG 791
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 161/379 (42%), Gaps = 44/379 (11%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR-NSLIDEAFVTLNQM 205
Y +L +SG+ + A +F++M G++PT Y +L Y + L++M
Sbjct: 219 YTTILHAYARSGKYKRAIDLFDKMEGIGLDPTLVTYNVMLDVYGKMGRSWGRILELLDEM 278
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
++ + D +T ST+I AC + ++ P TV N +L +GKAG+
Sbjct: 279 RS-KGLEFDEFTCSTVISACGREGMLDEARKFLAELKLNGYKPGTVMYNSMLQVFGKAGI 337
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+ + +L M E C PD T N + + + G +D + + G+ P T+
Sbjct: 338 YTEALSILKEM-EDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYT 396
Query: 326 ILIGAYGKK-------RMYDKM-------------------------SSVMEYMRKLQFP 353
+I AYGK R++ KM V++ + +++
Sbjct: 397 TVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLN 456
Query: 354 WTS---STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
+ +T+N ++ S+ G ++ +M G + D TF LI+ YA G
Sbjct: 457 GCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCG---SE 513
Query: 411 ISSVRLASKL---QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ S ++ ++ V+ YNA+++A D E V + M+ K +P+ ++S++
Sbjct: 514 VDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLL 573
Query: 468 TEAYAKEGMNDKVYALEQE 486
Y+K G + +E+E
Sbjct: 574 LHCYSKAGNVRGIEKVEKE 592
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 133/278 (47%), Gaps = 10/278 (3%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
DV Y+T++ A + +++ L+ M+ + P VT N++L YGK G R+L
Sbjct: 215 DVRAYTTILHAYARSGKYKRAIDLFDKMEGIGLDPTLVTYNVMLDVYGKMGR--SWGRIL 272
Query: 274 SGM--LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+ + S + D +T +T++S +G +D ++ + + G P T +N ++ +
Sbjct: 273 ELLDEMRSKGLEFDEFTCSTVISACGREGMLDEARKFLAELKLNGYKPGTVMYNSMLQVF 332
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
GK +Y + S+++ M P S TYN + + G + M ++G+ +
Sbjct: 333 GKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNA 392
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASK---LQIAENVSFYNAVISACIKADDLMEMERV 448
T+ +I+ Y AG + ++RL SK L A NV YN+V++ K ++ +V
Sbjct: 393 ITYTTVIDAYGKAG---REDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKV 449
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
MK C P+ T++ M ++EG ++ V + +E
Sbjct: 450 LCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLRE 487
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 114/259 (44%), Gaps = 11/259 (4%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+ W A V + ++ + F +P E +Y LL K+G KV E+ + + P+
Sbjct: 545 RGDWKAAESVIQDMQTKGF-KPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWI 603
Query: 181 LYTALLAAY--CRN-SLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
L L+ + CR+ ++ AF L + +PD+ ++++ F +
Sbjct: 604 LLRTLVLSNHKCRHLRGMERAFDQLQKY----GYKPDLVVINSMLSMFSRNKMFSKAREM 659
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
+ E + PN T N ++ Y + + E VL G ++++ +PDV + NT++ F
Sbjct: 660 LHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKG-IQNSVPEPDVVSYNTVIKGFC 718
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
KG + R + GI P T+N + Y ++D+ + V+ +M + +
Sbjct: 719 RKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSEL 778
Query: 358 TYNNVIEAFSDMGDAKHME 376
TY +++ + G KH E
Sbjct: 779 TYKILVDGYCKAG--KHEE 795
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 12/215 (5%)
Query: 91 IKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQ-VFEMLKEQPFYQPKEGTYMK 149
I+ ++K++ +W+ S+H K + + ++ F+ L++ Y+P
Sbjct: 586 IEKVEKEIYDGQVFPSWILLRTLVLSNH--KCRHLRGMERAFDQLQKYG-YKPDLVVINS 642
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
+L + ++ AR++ + + E G++P Y L+ Y R DE + +K +
Sbjct: 643 MLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVRE---DECWKAEEVLKGIQ 699
Query: 210 NC--QPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
N +PDV +Y+T+IK C + E I L +M + + P VT N L GY +F
Sbjct: 700 NSVPEPDVVSYNTVIKGFCRKGLMQEAIRVL-SEMTTKGIQPTIVTYNTFLSGYAGMELF 758
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
D+ V+ M+E C+P T ++ + G+
Sbjct: 759 DEANEVIRFMIEH-NCRPSELTYKILVDGYCKAGK 792
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 172/380 (45%), Gaps = 7/380 (1%)
Query: 111 VAETFSDHVLKKQWFQ-----ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARK 165
++ +F +L+ Q A++ F +Q Y Y+ L+ +L +G + +
Sbjct: 106 LSPSFVSFILRSTELQTKPDVAIRFFTWAGKQKKYTHNLECYVSLIDVLATNGVLDSVKS 165
Query: 166 VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC 225
VF++ E G+ T +L+ ++ +++E +MK +P +++Y+ L+
Sbjct: 166 VFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKE-NGIEPSLFSYNFLVNGL 224
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
V++ E E +++ M+ + P+ VT N ++ GY + G + L M E PD
Sbjct: 225 VNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAM-ELRNVAPD 283
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
T T++ +G D Y + G++ ++++IG K + +V E
Sbjct: 284 KITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFE 343
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
M + Y +I++ + G+ F++M EG++ D T+ ++N +G
Sbjct: 344 NMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSG 403
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ + + S +A N FY+++I K+ + E ER++ M +K C PDS ++
Sbjct: 404 RLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYN 463
Query: 466 IMTEAYAKEGMNDKVYALEQ 485
+ +A AK G D+ AL +
Sbjct: 464 ALIDALAKCGKIDEALALSK 483
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 121/310 (39%), Gaps = 38/310 (12%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+ L V+ +KE +P +Y L+ L S E A +VF M I P Y +
Sbjct: 197 EVLWVWRRMKENGI-EPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTM 255
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ YC +AF L M+ L N PD TY TLI+AC F+ LY +MDE+
Sbjct: 256 IKGYCEVGKTRKAFEKLKAME-LRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKG 314
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ ++V+GG K G + V M+ S CK +V ++ A G +
Sbjct: 315 LEIPPHVYSLVIGGLCKDGKRVEGYTVFENMI-SKGCKANVAIYTALIDSNAKCGNMGEA 373
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY------------------- 346
+++ + G++P+ T+ +++ + K D+ ME+
Sbjct: 374 MLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDG 433
Query: 347 ----------------MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
M K P S YN +I+A + G ++M +G
Sbjct: 434 LGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQT 493
Query: 391 TKTFCCLING 400
T+ LI G
Sbjct: 494 VYTYTILITG 503
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/332 (18%), Positives = 129/332 (38%), Gaps = 42/332 (12%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
NT+ + + + ++ F+ L+ E+ P + TYM L+ G + +++
Sbjct: 253 NTMIKGYCEVGKTRKAFEKLKAMELRN----VAPDKITYMTLIQACYAEGDFDSCLGLYH 308
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
EM E+G+E P +Y+ ++ C++ E + M + C+ +V Y+ LI +
Sbjct: 309 EMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMIS-KGCKANVAIYTALIDSNAKC 367
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIV-------------------------------- 256
L++ M + + P+ VT ++
Sbjct: 368 GNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFY 427
Query: 257 ---LGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
+ G GK+G D+ ER+ M++ C PD + N ++ A G++D ++
Sbjct: 428 SSLIDGLGKSGRVDEAERIFYEMVKKG-CPPDSYCYNALIDALAKCGKIDEALALSKRME 486
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
G D T+ ILI ++ ++ ++ + M T++ + + G
Sbjct: 487 VDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVA 546
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
++M G+ +T F +IN AG
Sbjct: 547 RACKILDEMAPMGVIPET-AFDDMINILCKAG 577
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 71/171 (41%)
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
LI + D + SV +++ T + N++I++F ++G + + + + +M G
Sbjct: 150 LIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKENG 209
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
++ ++ L+NG N+ + +I +V YN +I + +
Sbjct: 210 IEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAF 269
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
K M+ ++ PD T+ + +A EG D L E + LE H
Sbjct: 270 EKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPH 320
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 157/350 (44%), Gaps = 5/350 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P E TY ++ K+G + A K+ + + +G P Y++L+ C + ++ A
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ + + Y+TL+K L +DM E +P+ T N+V+ G
Sbjct: 378 VFYEAME-KGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGL 436
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G +L+ + C PD++T NT++ + + +D + + GI P+
Sbjct: 437 CKMGCLSDANGILNDAIAKG-CIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPD 495
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS-DMGDAKHMEYTF 379
T+N L+ K R D + + M + TYN +IE+F D ++ ME F
Sbjct: 496 VITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAME-LF 554
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISS-VRLASKLQIAENVSFYNAVISACIK 438
++M G+ D T C LI G + G K V + + + + + + +N +I+A +
Sbjct: 555 KEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCE 614
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
++ E+++ +M C PD+ T+ +M ++Y K G D + E +
Sbjct: 615 KLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENI 664
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 156/353 (44%), Gaps = 9/353 (2%)
Query: 125 FQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
+A +F EMLK+ P T+ KL+ +L K G + + K+F+++++ G+ P +
Sbjct: 198 IEAYHLFDEMLKQG--ICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFN 255
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
+ CR IDEA L + + PDV +Y+TLI + E M
Sbjct: 256 IFIQGLCRKGAIDEAARLLESIVS-EGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVN 314
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVL-SGMLESATCKPDVWTMNTILSVFANKGQV 302
V PN T N ++ G+ KAGM +++L M + PD +T +++++ N G +
Sbjct: 315 SGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFI--PDEFTYSSLINGLCNDGDM 372
Query: 303 D-MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ M +YE G +N L+ K+ + + +M+ M + TYN
Sbjct: 373 NRAMAVFYEAMEK-GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNL 431
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
V+ MG A+G D TF LI+GY K I +
Sbjct: 432 VVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG 491
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
I +V YN +++ KA L + +K M EK C P+ T++I+ E++ K+
Sbjct: 492 ITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKD 544
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 168/396 (42%), Gaps = 9/396 (2%)
Query: 83 GYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFY-- 140
G K ++++ ++ + +K D+ K + +A+ VFE + FY
Sbjct: 51 GLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMD---FYDC 107
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P +Y ++ +L + G A KV+ M + GI P +T + ++C A
Sbjct: 108 EPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALR 167
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACV-DAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
LN M C+ + +Y +I + + E L+ +M ++ + P+ +T N ++
Sbjct: 168 LLNNMPG-QGCEFNAVSYCAVISGFYKENCQIEAYH-LFDEMLKQGICPDILTFNKLIHV 225
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K G + E++ S +++ C P+++T N + KG +D R E + G+ P
Sbjct: 226 LCKKGNVQESEKLFSKVMKRGVC-PNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTP 284
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ ++N LI + K + + M TYN +I F G ++ +
Sbjct: 285 DVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKIL 344
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
+G D T+ LING N G ++ ++ A + ++ YN ++ K
Sbjct: 345 RDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQ 404
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+++ ++ K M E C PD T++++ K G
Sbjct: 405 GLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMG 440
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 139/346 (40%), Gaps = 37/346 (10%)
Query: 144 EGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLN 203
EG Y+ ++ G+ G+ + A VF M EP+ + Y A++ +A
Sbjct: 76 EGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYM 135
Query: 204 QMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKA 263
+MK + PDVYT++ +K+ R L +M + N V+ V+ G+ K
Sbjct: 136 RMKDI-GIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKE 194
Query: 264 GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
+ + ML+ C PD+ T N ++ V KG V E+ + K G+ P T
Sbjct: 195 NCQIEAYHLFDEMLKQGIC-PDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFT 253
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
FNI I +K D+ + ++E + +YN +I F H
Sbjct: 254 FNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCK--------------H 299
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
++ ++A+ C ++ N+G + N YN +I+ KA +
Sbjct: 300 SKLVEAE-----CYLHKMVNSG----------------VEPNEFTYNTIINGFCKAGMMQ 338
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+++ + K PD T+S + +G ++ A+ E ++
Sbjct: 339 NADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAME 384
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 78/183 (42%), Gaps = 3/183 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY LL L K+ + + F M+E+G P Y L+ ++C++ + EA
Sbjct: 494 PDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMEL 553
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD-ERSVTPNTVTQNIVLGGY 260
+MKT PD+ T TLI + L+ ++ E + +T NI++ +
Sbjct: 554 FKEMKT-RGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAF 612
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ E++ M + C PD +T ++ + G +D+ + + + G+ P
Sbjct: 613 CEKLNVSMAEKLFHKM-GGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPS 671
Query: 321 TRT 323
T
Sbjct: 672 FTT 674
>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
Length = 428
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 175/406 (43%), Gaps = 49/406 (12%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
AL++ ++ Y TY L+ L KSG + A+ + +M + G P YTAL
Sbjct: 28 HALELLHVMAANG-YDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTAL 86
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD-MDER 244
+ C+ +A T+ +M C+PD+ TY++LI A R + + Q+ M E
Sbjct: 87 IDGLCKARRPHDAIQTVKRMLR-SGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIES 145
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
P+ VT N + G KAG D+ +L M + PDV T +I+S ++D
Sbjct: 146 GRIPDVVTYNTFISGLCKAGKLDKGLEMLEEM-DRGGISPDVVTFCSIISGLCKANRIDD 204
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ ++ G P++ T++I++ + D + V+E+M K S+TY +I
Sbjct: 205 AFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIH 264
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF----------------- 407
A GD + + +EQ G + T I +G F
Sbjct: 265 ALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLP 324
Query: 408 -----HKVISSV----------RLASKLQ----IAENVSFYNAVISACIKADDLMEMERV 448
+ VI + +L+ K+ +V F+N +IS KA L + +++
Sbjct: 325 NLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQL 384
Query: 449 YKRMKEKH-CRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
K MK K+ C PD T++ M + +K G +L+Q KL LLE
Sbjct: 385 LKEMKAKNICVPDVVTYNTMIDGQSKFG------SLKQAKL--LLE 422
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 106/261 (40%), Gaps = 36/261 (13%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
A QVF+ + E+ P TY +L L ++ + + +V MV+ G Y L
Sbjct: 204 DAFQVFKGMLERGCV-PDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPL 262
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A R I+ A Q C +VYT++ I A + +F L + + M E
Sbjct: 263 IHALIRAGDIESASWAYEQAME-AGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESG 321
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN ++ N V+ G K+G D ++ ML+S CKPDV NT++S F G++
Sbjct: 322 SLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQA 381
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++ + E + NI + P TYN +I+
Sbjct: 382 QQLLK---------EMKAKNICV------------------------P-DVVTYNTMIDG 407
Query: 366 FSDMGDAKHMEYTFEQMHAEG 386
S G K + E+M A G
Sbjct: 408 QSKFGSLKQAKLLLEEMQAVG 428
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 70/175 (40%), Gaps = 3/175 (1%)
Query: 313 RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
R+F +D +N LI K R ++ M + + TY +I+ GD
Sbjct: 4 RHFRLDAAI--YNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDL 61
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAV 432
+ ++M G + T+ LI+G A H I +V+ + ++ YN++
Sbjct: 62 DAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSL 121
Query: 433 ISACIKADDLMEMERVYKRMKEKHCR-PDSETFSIMTEAYAKEGMNDKVYALEQE 486
I A+ + + V + + + R PD T++ K G DK + +E
Sbjct: 122 IHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEE 176
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 51/140 (36%)
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M F ++ YN +I +H M A G A T+ LI+G +G
Sbjct: 1 MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ ++ + A NV Y A+I KA + + KRM C PD T++
Sbjct: 61 LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120
Query: 467 MTEAYAKEGMNDKVYALEQE 486
+ D + QE
Sbjct: 121 LIHGLCMANRMDDAGLVLQE 140
>gi|357502623|ref|XP_003621600.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496615|gb|AES77818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 890
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 145/324 (44%), Gaps = 3/324 (0%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
LG+ G+ LA +F EG T ++A+++A+ RN +A M + P
Sbjct: 223 LGRLGEINLALGLFERARLEGYGSTVHSFSAMISAFGRNGRFPDAVDLFRSMSSW-GVVP 281
Query: 214 DVYTYSTLIKACVDA-MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
+V TY+++I A + F+++ Y +M + P+ +T N +L GM++ +++
Sbjct: 282 NVITYNSIIDAGAKGEVSFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKL 341
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
LS M + PDV+T NT L GQ+D+ R +E+ + + P T++ ++ Y
Sbjct: 342 LSEM-DHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYA 400
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K + + ++ E M+ +YN ++ + +G+ ++M G+ D
Sbjct: 401 KANLLEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVV 460
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
T+ L++GY G++ +V I N Y+ +I K + E VY+
Sbjct: 461 TYNALLSGYGKHGMYDEVRRLFEEMKARNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREF 520
Query: 453 KEKHCRPDSETFSIMTEAYAKEGM 476
K D +S + + K G+
Sbjct: 521 KMARLEIDVVFYSAIIDTLCKNGL 544
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 159/369 (43%), Gaps = 13/369 (3%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL +FE + + Y ++ ++ G++G+ A +F M G+ P Y +++
Sbjct: 232 ALGLFERARLEG-YGSTVHSFSAMISAFGRNGRFPDAVDLFRSMSSWGVVPNVITYNSII 290
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
A + + + V PD TY++L+ C +E+ + L +MD R +
Sbjct: 291 DAGAKGEVSFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRCI 350
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P+ T N L KAG D RV M S P+V T + ++ +A ++
Sbjct: 351 VPDVFTYNTYLDTLCKAGQIDLARRVFEEM-SSKRVWPNVVTYSAMMDGYAKANLLEDAL 409
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
YE+ + + + ++N L+G Y K D+ + M + TYN ++ +
Sbjct: 410 NLYEEMKLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGY 469
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G + FE+M A + +T T+ +I+ Y +F + + R ++ +V
Sbjct: 470 GKHGMYDEVRRLFEEMKARNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREFKMARLEIDV 529
Query: 427 SFYNAVISACIKADDLMEME-RVYKRMKEKHCRPDSETFSIMTEA--------YAKEGMN 477
FY+A+I K + LME + M EK +P+ TF+ + +A Y G +
Sbjct: 530 VFYSAIIDTLCK-NGLMESSIMLLMAMMEKGIKPNVVTFNSIIDASQQSPTLEYGVNGSS 588
Query: 478 DKV-YALEQ 485
D + Y +EQ
Sbjct: 589 DAIDYPIEQ 597
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 148/333 (44%), Gaps = 5/333 (1%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMV--EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQ 204
Y+ +L G + A+K F+ ++ + G +L +A++ R I+ A + L +
Sbjct: 179 YIYMLKEFGNTRSLLHAKKCFDFIMSKQNGRVDKGKLVSAMIGTLGRLGEINLA-LGLFE 237
Query: 205 MKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG 264
L V+++S +I A RF L++ M V PN +T N ++ K
Sbjct: 238 RARLEGYGSTVHSFSAMISAFGRNGRFPDAVDLFRSMSSWGVVPNVITYNSIIDAGAKGE 297
Query: 265 M-FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
+ FD + + M+ + PD T N++LSV A+KG +M ++ + + I P+ T
Sbjct: 298 VSFDVVVKFYDEMIANGLM-PDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPDVFT 356
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
+N + K D V E M + TY+ +++ ++ + +E+M
Sbjct: 357 YNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMK 416
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
+ D ++ L+ Y G + I + + I +V YNA++S K
Sbjct: 417 LRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYD 476
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
E+ R+++ MK ++ P++ T+S M + Y K M
Sbjct: 477 EVRRLFEEMKARNIYPNTLTYSTMIDMYTKGEM 509
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 148/321 (46%), Gaps = 2/321 (0%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
YQP TY ++ L K G+ A +F +M E G +P Y+ ++ + C++ ++EA
Sbjct: 6 YQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEAL 65
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+ MK P+++TY++LI+ + R+ + +M ++ PN VT ++++
Sbjct: 66 DIFSYMKA-KGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 124
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ K G + VL M E +P+V T +++++ ++ + +V + ++ G P
Sbjct: 125 FCKEGNVFEARGVLKTMTEMGV-EPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKP 183
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ ++NILI Y K + + + M +YN +I+ +G + F
Sbjct: 184 DVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLF 243
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
+ M G D T+ L++G+ G K R + N+ YN +I A K+
Sbjct: 244 KNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKS 303
Query: 440 DDLMEMERVYKRMKEKHCRPD 460
+L E +++ + + +P+
Sbjct: 304 RNLKEARKLFSELFVQGLQPN 324
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 123/285 (43%), Gaps = 27/285 (9%)
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
QPDV+TY+T+I L++ M E P+ VT + ++ K ++
Sbjct: 7 QPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALD 66
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYE------KFRNFGIDPETRTFN 325
+ S M ++ P+++T N+++ N RW E + + I P TF+
Sbjct: 67 IFSYM-KAKGISPNIFTYNSLIQGLCN------FSRWREASAMLNEMMSLNIMPNIVTFS 119
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
+LI + K+ + V++ M ++ TY++++ +S + F+ M +
Sbjct: 120 LLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITK 179
Query: 386 GMKADTKTFCCLINGYANAG-------LFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
G K D ++ LINGY A LF+++I + ++ YN +I +
Sbjct: 180 GCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQ-------GLTPDIVSYNTLIDGLCQ 232
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
L E ++K M PD T+SI+ + + K+G K + L
Sbjct: 233 LGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRL 277
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 152/365 (41%), Gaps = 39/365 (10%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F LK++ +P ++ L++ L K + A VF EM+ G++ + L
Sbjct: 29 RALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLQADVNVCNTL 88
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ CR ++ +A L+ M T DV+TYS L+ A
Sbjct: 89 IHCTCRLGMLRQARRLLHHM-TAHAFVLDVFTYSYLMDA--------------------- 126
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
GKAG + V S M + A C PD N ++S +G+VD
Sbjct: 127 --------------LGKAGRAAKALEVFSNM-QKAGCMPDTVVYNVLISCLGKQGKVDEA 171
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E GI P+ RT+NI+I Y+K S M++ + TYN ++
Sbjct: 172 LELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNG 231
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI-SSVRLASKLQIAE 424
+ F++M A D TF LI+ A AG + S RL K+
Sbjct: 232 LKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLV-KMGHVP 290
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
N YNA+IS ++ + + +++ M E C PDS T++I+ +++ G L
Sbjct: 291 NSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELL 350
Query: 485 QEKLQ 489
QE ++
Sbjct: 351 QEMVR 355
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 124/291 (42%), Gaps = 41/291 (14%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ LGK+G+ A +VF+ M + G P +Y L++ + +DEA L M
Sbjct: 119 TYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDM 178
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGK--- 262
PD TY+ +I R+E + + M R +P+ VT N +L G K
Sbjct: 179 NR-KGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRR 237
Query: 263 ----AGMFDQMER-----------------VLSGMLESATCK----------PDVWTMNT 291
+FD+M+ +G +E A + P+ + N
Sbjct: 238 TDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNA 297
Query: 292 ILSVFANKGQVDMMERWYEKFRNF---GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
++S F GQVD + YE F++ P++ T+ IL+ + ++ +++ M
Sbjct: 298 LISGFCRSGQVD---KGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMV 354
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+ +TYN +I + S G + F++M A+G D +T+ L N
Sbjct: 355 REGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPN 405
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 77/209 (36%), Gaps = 1/209 (0%)
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG-IDPETRTFNILIGAYGKK 334
M E+ C PDV NT+++ + G D + + + G P +F+ L+ K
Sbjct: 1 MRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKM 60
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
+V + M + N +I +G + M A D T+
Sbjct: 61 SRATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTY 120
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
L++ AG K + K + YN +IS K + E + + M
Sbjct: 121 SYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNR 180
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
K PD T++I+ + + G +K Y+
Sbjct: 181 KGIMPDCRTYNIVIDVLSSCGRYEKAYSF 209
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/473 (21%), Positives = 208/473 (43%), Gaps = 64/473 (13%)
Query: 81 IPGYRSKRTPIKNLKKKLERKAKAKA-----WVNTVAETFSDHVLKKQWFQALQVFEMLK 135
I G +N +ER++ + NT+ ++ + L + +A+++F ++K
Sbjct: 68 ILGRNGNLNIARNFLFSIERRSNGSVKIEDRFCNTLLRSYGNAGL---FNEAIKLFSLMK 124
Query: 136 EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE-GIEPTPELYTALLAAYCRNSL 194
P T+ LL++L K G+ +A VF+EM G+ P + L+ +C+NS+
Sbjct: 125 SSG-VSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSM 183
Query: 195 IDEAF---------------VTLNQM---------------------KTLPNCQPDVYTY 218
+DE F VT N + K + + PDV TY
Sbjct: 184 VDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTY 243
Query: 219 STLIKACVDAMRFELIETL--YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
+TL++ M+ E+ E L +++M R + PN +T N ++ G + FD+++ +L G
Sbjct: 244 TTLVRGY--CMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGA 301
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI------GA 330
+ PD T NT+++ + G D + ++K + + P++ T+++LI G
Sbjct: 302 VGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGD 361
Query: 331 YGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+ + ++++DK+S +R + YN + + G E F Q+ +G +
Sbjct: 362 FERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQ- 420
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
D ++ LI G+ G F + + + Y +I+ ++ + + +
Sbjct: 421 DPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTL 480
Query: 450 KRMKEKHCRPDSETF-SIMTEA----YAKEGMNDKVYALEQEKLQMLLEASGH 497
+RM + P + F SI++E +A+E + V +++ K++ + S H
Sbjct: 481 ERMLKSSYLPKTSVFHSILSELLKNDFARESASFVVLMIDR-KIRQNINLSTH 532
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 352 FPWTSSTYNNVIEAFSDMGD---AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
F S +Y +++ G+ A++ ++ E+ +K + + L+ Y NAGLF+
Sbjct: 55 FAHDSRSYFMMLDILGRNGNLNIARNFLFSIERRSNGSVKIEDRFCNTLLRSYGNAGLFN 114
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH-CRPDSETFSIM 467
+ I L ++ +V +N+++ +K V+ M + PD+ TF+I+
Sbjct: 115 EAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNIL 174
Query: 468 TEAYAKEGMNDKVYALEQE 486
+ K M D+ + +E
Sbjct: 175 IRGFCKNSMVDEGFRFFKE 193
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 176/429 (41%), Gaps = 54/429 (12%)
Query: 108 VNTVAETFSDHVLKKQWF------QALQVFEMLKEQ-PFYQPKEGTYMKLLVLLGKSGQP 160
+ V + FS +L K QA + M+ E P Y ++ K G
Sbjct: 189 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDV 248
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM---KTLPNCQPDVYT 217
A +F EMV+ GI P Y +++ A C+ +D+A L QM + LPN +T
Sbjct: 249 NKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN----NWT 304
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y+ LI +++ ++++M S+ P+ VT ++++G K G + V M
Sbjct: 305 YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMA 364
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
PDV++ N +L+ +A KG + M ++ GI P+ TFN+LI AY M
Sbjct: 365 MKGQ-NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGML 423
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
DK + MR TY VI A +G F QM +G+ D + CL
Sbjct: 424 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 483
Query: 398 INGYANAG----------------------LFHKVISSVRLASKLQIAENVSFYNAVISA 435
I G+ G F +I+++ ++ A+N+ ++ ++
Sbjct: 484 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNI--FDLTVNV 541
Query: 436 CIKADDLM------------EME---RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+ D ++ +ME RV+ M P+ + + Y K G D+
Sbjct: 542 GLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEG 601
Query: 481 YALEQEKLQ 489
+L +E LQ
Sbjct: 602 LSLFREMLQ 610
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 159/381 (41%), Gaps = 58/381 (15%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ ++ +PELA F +++ G+ + LL +C DEA
Sbjct: 122 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 181
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRF----ELIET--------------------- 236
L C PDV++YS L+K+ D + +L+
Sbjct: 182 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 241
Query: 237 ------------LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
L+++M +R + P+ VT N V+ KA D+ E L M+ P
Sbjct: 242 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL-P 300
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA---YGK----KRMY 337
+ WT N ++ +++ GQ R +++ R I P+ T ++L+G+ YGK + ++
Sbjct: 301 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 360
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
D M+ K Q P S YN ++ ++ G M F+ M +G+ D TF L
Sbjct: 361 DTMAM------KGQNPDVFS-YNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVL 413
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI---KADDLMEMERVYKRMKE 454
I YAN G+ K + + +V Y VI+A K DD ME + +M +
Sbjct: 414 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK---FNQMID 470
Query: 455 KHCRPDSETFSIMTEAYAKEG 475
+ PD ++ + + + G
Sbjct: 471 QGVAPDKYAYNCLIQGFCTHG 491
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 150/365 (41%), Gaps = 5/365 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
QW +A++VF+ ++ P T L+ L K G+ + AR VF+ M +G P Y
Sbjct: 317 QWKEAVRVFKEMRRHSIL-PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 375
Query: 183 TALLAAYC-RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+L Y + L+D L + PD YT++ LIKA + + ++ +M
Sbjct: 376 NIMLNGYATKGCLVD--MTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM 433
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ V P+ VT V+ + G D + M++ PD + N ++ F G
Sbjct: 434 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV-APDKYAYNCLIQGFCTHGS 492
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ + + N G+ + F+ +I K ++ + + + Y+
Sbjct: 493 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSM 552
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+++ + +G + F+ M + G++ + +C L+NGY G + +S R +
Sbjct: 553 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRG 612
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
I + Y+ +I +A + + + M E D T++I+ K D+
Sbjct: 613 IKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAI 672
Query: 482 ALEQE 486
L +E
Sbjct: 673 FLFKE 677
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 94/199 (47%), Gaps = 7/199 (3%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+ L +F EML Q +P Y ++ L ++G+ A+ F+EM E GI Y
Sbjct: 600 EGLSLFREML--QRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNI 657
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
+L +N DEA +++ + N + ++ T +T+I R E + L+ +
Sbjct: 658 VLRGLFKNRCFDEAIFLFKELRAM-NVKINIITLNTMIDGMFQTRRVEEAKDLFASISRS 716
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ PN VT +I++ K G+ ++ E + S M ++A C+P+ +N ++ K ++
Sbjct: 717 RLVPNVVTYSIMITNLIKEGLVEEAEDMFSSM-QNAGCEPNSRLLNHVVRELLKKNEIVR 775
Query: 305 MERWYEKF--RNFGIDPET 321
+ K RNF ++ T
Sbjct: 776 AGAYLSKIDERNFSLEHLT 794
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 168/386 (43%), Gaps = 5/386 (1%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
NTV ++ ++ +Q M KE P ++ ++ K G+ A + N
Sbjct: 231 NTVIKSLCGDSRSQEALDMVQ--RMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLIN 288
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
EMV++G+EP Y +++ A C+ +D+A + L QM +PD TY+ +I +
Sbjct: 289 EMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVD-KGVEPDGLTYTAIIHGYSCS 347
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
++ +++ M + + P VT N + K G E + M PD+ +
Sbjct: 348 GHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGH-MPDLVS 406
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
+ +L +A +G+ M + + GI FNILI A+ K+ M D+ V M+
Sbjct: 407 YSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQ 466
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
TY+ +I AF MG F QM + G++ +T + LI+G+ G
Sbjct: 467 GQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLV 526
Query: 409 KVISSV-RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
K V + SK N+ F++++I + +M+ V+ + RP TF+ +
Sbjct: 527 KAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSL 586
Query: 468 TEAYAKEGMNDKVYALEQEKLQMLLE 493
+ Y G +K + + + + +E
Sbjct: 587 IDGYCLVGKMEKAFGVLDAMVSVGIE 612
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 154/340 (45%), Gaps = 19/340 (5%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF-VTLNQ 204
TY L+ ++ +P+L F ++ G+ L C DEA V L++
Sbjct: 158 TYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHR 217
Query: 205 MKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERS-VTPNTVTQNIVLGGYGK 262
M L C P+ +Y+T+IK+ C D+ E ++ + + E +P+ V+ N V+ G+ K
Sbjct: 218 MSDL-GCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFK 276
Query: 263 AGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETR 322
G + +++ M++ +PDV T N+I+ +D E + + G++P+
Sbjct: 277 QGEVSKACNLINEMVQKGV-EPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGL 335
Query: 323 TFNILIGAYG-------KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
T+ +I Y +M+ KM+S K P T+N+ + + G +K
Sbjct: 336 TYTAIIHGYSCSGHWKESAKMFRKMTS------KGLIPGIV-TFNSFMSSLCKHGRSKDA 388
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
E F+ M +G D ++ L++GYA G F + + + I N +N +ISA
Sbjct: 389 EEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISA 448
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
K + E V+ M+ + RPD T+S + A+ + G
Sbjct: 449 HAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMG 488
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/420 (21%), Positives = 170/420 (40%), Gaps = 46/420 (10%)
Query: 97 KLERKAKAKAWV------NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKL 150
K+ RK +K + N+ + H K A ++F+ + + + P +Y L
Sbjct: 355 KMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKD---AEEIFQYMTTKG-HMPDLVSYSIL 410
Query: 151 LVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPN 210
L G+ +F+ M ++GI + L++A+ + ++DEA + +M+
Sbjct: 411 LHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQG-QG 469
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
+PDV TYSTLI A R + M + PNTV + ++ G+ G + +
Sbjct: 470 VRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAK 529
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
++S M+ +P++ ++I+ N+G+V + + G P TFN LI
Sbjct: 530 ELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDG 589
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
Y +K V++ M + TYN ++ + G F +M + +K
Sbjct: 590 YCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPT 649
Query: 391 TKTFCCLINGYANAG-------LFHKVISS-------------------------VRLAS 418
T T+ +++G +AG +FH++I S + L
Sbjct: 650 TVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFH 709
Query: 419 KLQIAE---NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
KL + +++ N VI+A K E ++ + P+ T+ +M KEG
Sbjct: 710 KLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEG 769
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 147/345 (42%), Gaps = 21/345 (6%)
Query: 163 ARKVFNEMVEEGI---EPTPELYTALLA-----AYCRN--SLIDEAFVTLNQMKTLPNCQ 212
A +F+E++ +G P + A LA C N +L+ F + + + P
Sbjct: 93 AHHLFDELLRQGTPVHNPALNGFLAALARAPDSVSCSNGPALVLALFNRICREEAGPRVA 152
Query: 213 P-DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
P V+TY L+ C A R +L + + + T+ N L A D+
Sbjct: 153 PLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVD 212
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQ----VDMMERWYEKFRNFGIDPETRTFNIL 327
VL + C P+ + NT++ + +DM++R ++ P+ +FN +
Sbjct: 213 VLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGR--CSPDVVSFNTV 270
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
I + K+ K +++ M + TYN++++A E QM +G+
Sbjct: 271 IHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGV 330
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
+ D T+ +I+GY+ +G + + R + + + +N+ +S+ K + E
Sbjct: 331 EPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEE 390
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEG----MNDKVYALEQEKL 488
+++ M K PD ++SI+ YA EG MN+ +++ + +
Sbjct: 391 IFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGI 435
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 117/286 (40%), Gaps = 35/286 (12%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L G+ A VFN ++ G PT + +L+ YC +++AF L+ M ++ +P
Sbjct: 555 LCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSV-GIEP 613
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
DV TY+TL+ + + + L+++M + V P TVT +IVL G AG +++
Sbjct: 614 DVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMF 673
Query: 274 SGMLESAT----------------------------------CKPDVWTMNTILSVFANK 299
M++S T CK D+ +NT+++
Sbjct: 674 HEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKV 733
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
+ + + G+ P T+ ++I K+ ++ ++ M K +S
Sbjct: 734 RRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLL 793
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
N++I GD Y ++ + + T L++ +++ G
Sbjct: 794 NDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKG 839
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 168/364 (46%), Gaps = 4/364 (1%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL +F ++E+ + Y ++ L K G + A +FNEM +GI+ Y++++
Sbjct: 228 ALDLFRKMEERSI-KASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSII 286
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
C + D+ L +M N P+V T+S LI V + + LY +M R +
Sbjct: 287 GGLCNDGRWDDGAKMLREMIG-RNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGI 345
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P+T+T + ++ G+ K + ++L M+ S C+P++ T + +++ + +VD
Sbjct: 346 APDTITYSSLIDGFCKENRLGEANQMLDLMV-SKGCEPNIVTYSILINSYCKAKRVDNGM 404
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
R + + + G+ +T T+N L+ + + + + + M P + TY +++
Sbjct: 405 RLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGL 464
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
D G+ + FE+M M + +I+G NA S S + +V
Sbjct: 465 CDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDV 524
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY-AKEGMNDKVYALEQ 485
YN +I K L E + ++++MKE C P T++I+ A+ G+ V +E+
Sbjct: 525 LTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEE 584
Query: 486 EKLQ 489
K++
Sbjct: 585 MKMR 588
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 155/358 (43%), Gaps = 19/358 (5%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
++P T+ L+ G+ A + + MVE P L+ C + EA
Sbjct: 135 FEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEAL 194
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
V +++M C+ + TY ++ + L L++ M+ERS+ + V +IV+
Sbjct: 195 VLIDRMVKY-GCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDS 253
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K G D + + M E K DV ++I+ N G+ D + + I P
Sbjct: 254 LCKDGNLDDALSLFNEM-EMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIP 312
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF---SDMGDAKHME 376
TF+ LI + K+ + + M + TY+++I+ F + +G+A M
Sbjct: 313 NVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQM- 371
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL----ASKLQIAENVSFYNAV 432
+ M ++G + + T+ LIN Y A +V + +RL +SK +A+ V+ YN +
Sbjct: 372 --LDLMVSKGCEPNIVTYSILINSYCKA---KRVDNGMRLFCEISSKGLVADTVT-YNTL 425
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ-EKLQ 489
+ ++ L + +++ M + P T+ I+ + G K ALE EK+Q
Sbjct: 426 VQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQK--ALEIFEKMQ 481
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 119/301 (39%), Gaps = 30/301 (9%)
Query: 191 RNSLID-------EAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
RN ++D + F ++ Q + LP+ + +S L A ++L+ ++MD
Sbjct: 42 RNGIVDIKVNEAIDLFESMIQSRPLPS----LIDFSKLFSAVARRKEYDLVLGFCKEMDL 97
Query: 244 RSVTPNTVTQNIVLGGYGKAG----MFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
+ N T NI++ + + F + R L E P+ T +T+++ F +
Sbjct: 98 NGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFE-----PNTITFSTLINGFCLE 152
Query: 300 GQVD----MMERWYE-KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 354
G+V +++R E K+R P T N LI K + +++ M K
Sbjct: 153 GRVSEAVALVDRMVEMKYR-----PNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEA 207
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
TY V+ G+ F +M +KA + +I+ G +S
Sbjct: 208 NEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLF 267
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
I +V Y+++I + ++ + M ++ P+ TFS + + + KE
Sbjct: 268 NEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKE 327
Query: 475 G 475
G
Sbjct: 328 G 328
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 84/203 (41%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P + + + S A + + D++ + ++ GI+ T NI+I + +KR SV
Sbjct: 67 PSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSV 126
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ K F + T++ +I F G ++M + + T LING
Sbjct: 127 VGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCL 186
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
G + + + K N Y V++ K+ + ++++M+E+ +
Sbjct: 187 KGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQ 246
Query: 464 FSIMTEAYAKEGMNDKVYALEQE 486
+SI+ ++ K+G D +L E
Sbjct: 247 YSIVIDSLCKDGNLDDALSLFNE 269
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 166/369 (44%), Gaps = 9/369 (2%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A ++F+ ++++ P TY ++ L ++G+ A K+F+EMV + +EP YTAL+
Sbjct: 377 AYRLFDEMQKRKI-SPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALI 435
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
YC+ + EAF NQM + P++ TY+ L + L +M + +
Sbjct: 436 DGYCKEGKMKEAFSLHNQMLQM-GLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGL 494
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
N T N ++ G KAG DQ +++ M E A PD T T++ + + M
Sbjct: 495 ELNIYTYNSLVNGLCKAGNIDQAVKLMKDM-EVAGFHPDAVTYTTLMDAYCKSRE---MV 550
Query: 307 RWYEKFRNF---GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
R +E R + P TFN+L+ + M + ++++M + ++TYN++I
Sbjct: 551 RAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLI 610
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
+ + + + + M A+G+ D T+ LI G+ A + R
Sbjct: 611 KQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFN 670
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
VS YNA+I K +E ++++M+ + D E ++I + EG + L
Sbjct: 671 LTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLEL 730
Query: 484 EQEKLQMLL 492
E ++ L
Sbjct: 731 CDEAIEKCL 739
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 157/348 (45%), Gaps = 6/348 (1%)
Query: 129 QVFEMLKEQPF--YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+V ++++E +P TY +++LL K+G+ A +V EM+ EGI P +YT L+
Sbjct: 306 RVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLI 365
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+C+ + A+ ++M+ PD TY+ +I R + L+ +M + +
Sbjct: 366 DGFCKLGNVSSAYRLFDEMQK-RKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRL 424
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P+ VT ++ GY K G + + + ML+ P++ T + G+VD
Sbjct: 425 EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGL-TPNIVTYTALADGLCKCGEVDTAN 483
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ G++ T+N L+ K D+ +M+ M F + TY +++A+
Sbjct: 484 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAY 543
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
+ QM ++ TF L+NG+ +G+ ++ + I N
Sbjct: 544 CKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 603
Query: 427 SFYNAVISA-CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ YN++I CI+ +++ +Y+ M K PD T++I+ + + K
Sbjct: 604 TTYNSLIKQYCIR-NNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCK 650
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 133/313 (42%), Gaps = 2/313 (0%)
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
++A KVF E E G+ Y + + C+ + EA L QM+ L C PDV +YST
Sbjct: 235 KIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQME-LRGCIPDVISYST 293
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
+I + + L ++M + + PN T N V+ K G + ERVL M+ S
Sbjct: 294 VINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMI-SE 352
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
PD T++ F G V R +++ + I P+ T+ +I + +
Sbjct: 353 GIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEA 412
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+ M + TY +I+ + G K QM G+ + T+ L +G
Sbjct: 413 DKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADG 472
Query: 401 YANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
G + + + N+ YN++++ KA ++ + ++ K M+ PD
Sbjct: 473 LCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPD 532
Query: 461 SETFSIMTEAYAK 473
+ T++ + +AY K
Sbjct: 533 AVTYTTLMDAYCK 545
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 150/339 (44%), Gaps = 2/339 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY ++ + G A K+F+EM +G+EP +T L+ YC+ + +AF
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
N M C P+V TY+TLI + L +M + + PN T N ++ G
Sbjct: 444 HNHM-IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 502
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K+G ++ + L G E+A D T T++ + G++D + ++ G+ P
Sbjct: 503 KSGNIEEAVK-LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
TFN+L+ + M + ++ +M ++T+N++++ + + K ++
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M + G+ D KT+ L+ G+ A + + + +VS Y+ +I +K
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+E V+ +M+ + D E F ++ K D +
Sbjct: 682 FLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTI 720
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 165/368 (44%), Gaps = 9/368 (2%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
L K W ++ E++K + +P Y ++ LL + + A + F+EM+ +GI P
Sbjct: 297 LDKVW----KLIEVMKRKGL-KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT 351
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+YT L+ +C+ I A +M + + PDV TY+ +I L+
Sbjct: 352 VVYTTLIDGFCKRGDIRAASKFFYEMHS-RDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
+M + + P++VT ++ GY KAG RV + M++ A C P+V T T++ +
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ-AGCSPNVVTYTTLIDGLCKE 469
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G +D + G+ P T+N ++ K ++ ++ + TY
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+++A+ G+ + ++M +G++ TF L+NG+ G+ +
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 420 LQIAENVSFYNAVISA-CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
IA N + +N+++ CI+ ++L +YK M + PD +T+ + + + K
Sbjct: 590 KGIAPNATTFNSLVKQYCIR-NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648
Query: 479 KVYALEQE 486
+ + L QE
Sbjct: 649 EAWFLFQE 656
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 149/364 (40%), Gaps = 42/364 (11%)
Query: 163 ARKVFNEMVEEGIEPTPE---LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYS 219
AR+VF +M+ G+ + + +Y L+ C + A + + + C +V +Y+
Sbjct: 194 ARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA--TAIIVFREFPEVGVCW-NVASYN 250
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
+I R + L M+ + TP+ ++ + V+ GY + G D++ +++ +++
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE-VMKR 309
Query: 280 ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
KP+ + +I+ + ++ E + + GI P+T + LI + K+
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
S M TY +I F +GD F +M +G++ D+ TF LIN
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 400 GYANAG--------------------------LFHKVISSVRLAS---------KLQIAE 424
GY AG L + L S K+ +
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
N+ YN++++ K+ ++ E ++ + D+ T++ + +AY K G DK +
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 485 QEKL 488
+E L
Sbjct: 550 KEML 553
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 14/181 (7%)
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G P+ +++ ++ Y + DK+ ++E M++ S Y ++I +
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 335
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL-------QIAENVSF 428
E F +M +G+ DT + LI+G+ G +R ASK I +V
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRG-------DIRAASKFFYEMHSRDITPDVLT 388
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
Y A+IS + D++E +++ M K PDS TF+ + Y K G + + +
Sbjct: 389 YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448
Query: 489 Q 489
Q
Sbjct: 449 Q 449
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 79/196 (40%), Gaps = 9/196 (4%)
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
D + V + G + R +EK N+G+ + N+ + K Y ++++
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKD-CYKTATAII 232
Query: 345 EYMRKLQFP-----WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+ +FP W ++YN VI +G K + M +G D ++ ++N
Sbjct: 233 VFR---EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
GY G KV + + + + N Y ++I + L E E + M + P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 460 DSETFSIMTEAYAKEG 475
D+ ++ + + + K G
Sbjct: 350 DTVVYTTLIDGFCKRG 365
>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
Length = 668
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 161/382 (42%), Gaps = 36/382 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG-IEPTPELYTALLAAYCRNSLIDEAFV 200
P+ L+ LG +G+ A +F E G I+P Y ALL Y R + + A
Sbjct: 261 PRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQ 320
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L++M PD TYS L+ A A R+E L ++M+ V P++ + +L G+
Sbjct: 321 VLDEMSQC-GVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGF 379
Query: 261 GKAGMFDQMERVLSGMLESAT----------------------------------CKPDV 286
G + + VL M S +PDV
Sbjct: 380 RDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDV 439
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
T NT++ G+ D +E+ R P T T+NI+I G++ ++ + +++
Sbjct: 440 VTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSE 499
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M++ TY +++ + G K E M A+G+K + L+N YA GL
Sbjct: 500 MKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGL 559
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
++ V+ + ++ N++I+A + ++E V + M+E RPD T++
Sbjct: 560 ADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTT 619
Query: 467 MTEAYAKEGMNDKVYALEQEKL 488
+ +A + DKV + +E +
Sbjct: 620 LMKALIRVEQFDKVPVIYEEMI 641
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 145/326 (44%), Gaps = 2/326 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E TY L+ ++G+ E AR + EM +G++P+ +++ +LA + +AF
Sbjct: 332 PDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAV 391
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L +M+ +PD + Y+ +I + M E + P+ VT N ++ +
Sbjct: 392 LREMQA-SGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHC 450
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G D+ + M ES C P T N ++++ + + +E + + G+ P
Sbjct: 451 KGGRHDRAAELFEEMRES-NCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNI 509
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+ L+ YG+ Y + +E M+ + + Y+ ++ A++ G A H +
Sbjct: 510 ITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKA 569
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M A+G++ LIN + + S ++ + + +V Y ++ A I+ +
Sbjct: 570 MKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQ 629
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIM 467
++ +Y+ M C PD + +++
Sbjct: 630 FDKVPVIYEEMITSGCAPDRKARAML 655
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/362 (18%), Positives = 141/362 (38%), Gaps = 40/362 (11%)
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQP---ELARKVFNEMVEEGIEPTPELYTA 184
L++ +L+E F P +Y LL L + P L ++ ++ E +EP L++
Sbjct: 175 LRLLSLLREHDFL-PDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSD 233
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L++A+ R +L D A L + +
Sbjct: 234 LISAFARAALPDAALELLASAQAI------------------------------------ 257
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+TP + ++ G AG + E + + KP N +L + +
Sbjct: 258 GLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKN 317
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
E+ ++ G+ P+ T+++L+ AY + ++ +++ M +S ++ ++
Sbjct: 318 AEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILA 377
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
F D GD + +M A G++ D + +I+ + + + + I
Sbjct: 378 GFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEP 437
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
+V +N +I A K +++ M+E +C P + T++IM ++ + V A+
Sbjct: 438 DVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAML 497
Query: 485 QE 486
E
Sbjct: 498 SE 499
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 35/173 (20%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
++ W + +KEQ P TY L+ + G+SG+ + A M +G++P+P
Sbjct: 487 QEHWEGVEAMLSEMKEQGLV-PNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPT 545
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMK------------TLPNC----------------- 211
+Y AL+ AY + L D A + MK +L N
Sbjct: 546 MYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFM 605
Query: 212 -----QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+PDV TY+TL+KA + +F+ + +Y++M P+ + ++ G
Sbjct: 606 RENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRSG 658
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 154/327 (47%), Gaps = 4/327 (1%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A KV+ M+ EG++P+ + Y+AL+ A R + L +MK++ +P++YTY+ I
Sbjct: 219 ALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSI-GLRPNIYTYTICI 277
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
+A A R + ++++MD+ P+ +T +++ AG D+ + + M S+
Sbjct: 278 RALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSH- 336
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
PD T T++ F G ++ ++R++ + G P+ T+ ILI A K D+
Sbjct: 337 SPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFD 396
Query: 343 VMEYMR-KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+++ M K FP TYN +I E M + G+K ++ I+ Y
Sbjct: 397 MLDVMTTKGIFP-NLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYY 455
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
+G K I + K I +++ NA + + + E E ++ + + PDS
Sbjct: 456 GKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDS 515
Query: 462 ETFSIMTEAYAKEGMNDKVYALEQEKL 488
T++++ + Y+K G DK L E +
Sbjct: 516 VTYNMLMKCYSKAGQIDKATQLLSEMI 542
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 156/351 (44%), Gaps = 38/351 (10%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL++FE +K + P TY LL GKS + +++EM G EP + +
Sbjct: 814 KALELFEDMKSAGTH-PNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNII 872
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
++A +++ +++A ++ + + P TY LI + A R E ++++M +
Sbjct: 873 ISALVKSNNLNKALDLYYELMS-GDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYG 931
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN+V NI++ G+GK+G D + M++ +PD+ + ++ G++D
Sbjct: 932 CGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGI-RPDLKSYTILVECLCITGRIDEA 990
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+++E+ + G+DP+T ++N +I GK R D+ S+ M+ TYN +I
Sbjct: 991 VQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILH 1050
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
G +E++ G++ T+ LI G++ +G + S
Sbjct: 1051 LGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFS------------- 1097
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
V+K+M C P++ETF+ + Y + G+
Sbjct: 1098 ----------------------VFKKMMVVGCSPNTETFAQLPNKYPRAGL 1126
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 168/425 (39%), Gaps = 76/425 (17%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL+V++ + + +P TY L+V LG+ G + EM G+ P YT
Sbjct: 218 EALKVYKRMISEGM-KPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTIC 276
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A R ID+A+ +M C PDV TY+ LI A A + + + LY M S
Sbjct: 277 IRALGRARRIDDAWGIFKEMDD-EGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASS 335
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+P+ VT ++ +GK G + ++R + M E PDV T ++ G VD
Sbjct: 336 HSPDRVTYITLMDKFGKVGDLETVKRFWNEM-EVDGYAPDVVTYTILIEALCKSGDVDRA 394
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ GI P T+N +I K R D+ ++E M L T+ +Y I+
Sbjct: 395 FDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDY 454
Query: 366 FSDMGDAKHMEYTFEQM-----------------------------------HAEGMKAD 390
+ GD TFE M H G+ D
Sbjct: 455 YGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPD 514
Query: 391 TKTFCCLINGYANAG----------------------LFHKVISSVRLASK--------- 419
+ T+ L+ Y+ AG + + +I+++ A +
Sbjct: 515 SVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFG 574
Query: 420 ----LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
L++A V YN +++ K +++ ++ M E C P++ TF+ + + +K
Sbjct: 575 RLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSK-- 632
Query: 476 MNDKV 480
ND V
Sbjct: 633 -NDAV 636
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 122/280 (43%), Gaps = 38/280 (13%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL++ E + E +P +Y+ + GKSG P A F M + GI P+
Sbjct: 428 EALELLENM-ESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPS------- 479
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+AA C +YT + + R E ++ D+ +
Sbjct: 480 IAA----------------------CNASLYTLA-------ETGRISEAEDIFNDLHKCG 510
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
++P++VT N+++ Y KAG D+ ++LS M+ S C+PDV +N++++ G+VD
Sbjct: 511 LSPDSVTYNMLMKCYSKAGQIDKATQLLSEMI-SKGCEPDVMIINSLINTLYKAGRVDAA 569
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ + + +N + P T+NIL+ GK+ K + M + P + T+N++++
Sbjct: 570 WKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDC 629
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
S F +M D T+ +I G G
Sbjct: 630 LSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREG 669
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 145/353 (41%), Gaps = 17/353 (4%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ K+GQ + A ++ +EM+ +G EP + +L+ + +D A+
Sbjct: 513 PDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKM 572
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
++K L P V TY+ L+ + L+ M E PNT+T N +L
Sbjct: 573 FGRLKNL-KLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLS 631
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K D ++ M C PDV T NTI+ +G++D ++ + + F + P+
Sbjct: 632 KNDAVDLALKMFCRM-TMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKF-LSPDY 689
Query: 322 RTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T LI G R+ D + VME++ + S + ++E + + E
Sbjct: 690 VTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAE 749
Query: 381 QMHAEGMKAD-------TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
+ + D K C +F K L I + YN ++
Sbjct: 750 ILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDK------FTKNLGIHPTLESYNCLM 803
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ ++ + +++ MK P++ T++++ +A+ K +K+Y L E
Sbjct: 804 DGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSE 856
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 135/353 (38%), Gaps = 46/353 (13%)
Query: 148 MKLLVLLGKSGQPELARKVFNEMVEE-GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
+ L+ +L K + A+ VF++ + GI PT E Y L+ ++ ++A MK
Sbjct: 764 LPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMK 823
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-- 264
+ P+ +TY+ L+ A + R + LY +M R PN +T NI++ K+
Sbjct: 824 S-AGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNL 882
Query: 265 --MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETR 322
D ++SG C T ++ G+ + + +E+ ++G P +
Sbjct: 883 NKALDLYYELMSGDFSPTPC-----TYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSV 937
Query: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
+NILI +GK D + + M K +Y ++E G FE++
Sbjct: 938 IYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEEL 997
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
G+ DT ++ +ING K+ L
Sbjct: 998 KLTGLDPDTVSYNFIINGLG-----------------------------------KSRRL 1022
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
E ++ MK + PD T++ + G D + +E + LE S
Sbjct: 1023 DEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPS 1075
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/385 (19%), Positives = 160/385 (41%), Gaps = 9/385 (2%)
Query: 91 IKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKL 150
+ N K+K + + ++ V T+ ++ SD A F+++ + + +
Sbjct: 84 VNNGKRKKNKTSVSEEEVMTILKSISDPN------SAFSYFKIVSQLTNFVHTTDACNYM 137
Query: 151 LVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPN 210
L +L + + E VF+ M ++ I Y + A I A L +M T
Sbjct: 138 LEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKM-TEVG 196
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
+ Y+Y+ LI + E ++ +Y+ M + P+ T + ++ G+ G ++
Sbjct: 197 FILNAYSYNGLIHLLLPGFCNEALK-VYKRMISEGMKPSMKTYSALMVALGRRGDTRKIM 255
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
+L M +S +P+++T + ++D +++ + G P+ T+ +LI A
Sbjct: 256 NLLEEM-KSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDA 314
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
DK + MR TY +++ F +GD + ++ + +M +G D
Sbjct: 315 LCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPD 374
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
T+ LI +G + + + + I N+ YN +I +KA L E + +
Sbjct: 375 VVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLE 434
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEG 475
M+ +P + ++ + + Y K G
Sbjct: 435 NMESLGVKPTAFSYVLFIDYYGKSG 459
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 90/433 (20%), Positives = 161/433 (37%), Gaps = 70/433 (16%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+ +AL++F + E P T+ LL L K+ +LA K+F M P Y
Sbjct: 600 KILKALELFGSMTESG-CPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTY 658
Query: 183 TALLAAYCRNSLIDEAFVTLNQMK--------TLPNCQPDVYTYSTLIKACVDAMRF--- 231
++ R ID AF +QMK TL P V + + A M F
Sbjct: 659 NTIIYGLIREGRIDYAFWFFHQMKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQ 718
Query: 232 -----------ELIETLYQDMD-ERSVT------PNTVTQNI--------VLGGYGKA-- 263
EL+E + + + E +++ N+V Q+ VL KA
Sbjct: 719 ACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALD 778
Query: 264 --GMFDQMER-------------VLSGML---------------ESATCKPDVWTMNTIL 293
+FD+ + ++ G+L +SA P+ +T N +L
Sbjct: 779 AQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLL 838
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
+++ + Y + R+ G +P T NI+I A K +K + + F
Sbjct: 839 DAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFS 898
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
T TY +I+ G ++ FE+M G ++ + LING+ +G
Sbjct: 899 PTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACEL 958
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ K I ++ Y ++ + E + ++ +K PD+ +++ + K
Sbjct: 959 FKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGK 1018
Query: 474 EGMNDKVYALEQE 486
D+ +L E
Sbjct: 1019 SRRLDEALSLFSE 1031
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 6/151 (3%)
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M ++ F + +YN +I G +++M +EGMK KT+ L+ G
Sbjct: 192 MTEVGFILNAYSYNGLIHLLLP-GFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGD 250
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
K+++ + + + N+ Y I A +A + + ++K M ++ C PD T+++
Sbjct: 251 TRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTV 310
Query: 467 MTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
+ +A G DK ++L + + AS H
Sbjct: 311 LIDALCAAGKLDKA-----KELYVKMRASSH 336
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 158/335 (47%), Gaps = 4/335 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ + G E + K+ +M+ +G++ + YT LL++ C++ IDEA +
Sbjct: 373 PDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVIL 432
Query: 202 LNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L++M+ + +PD+ TYS LI C E IE LY++M + + PN+ + ++ G
Sbjct: 433 LHEMEVI-GLKPDLLTYSVLIHGLCKRGAVEEAIE-LYEEMCSKRIYPNSFVCSAIISGL 490
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ G + + + +S + ++ N ++ +A G + R Y++ GI P
Sbjct: 491 FEKGAISEAQMYFDSVTKSDVAE-EIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPT 549
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
TFN LI + KK + +++ ++ TS TY ++ + + GD M
Sbjct: 550 IVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLH 609
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M A+ +K T+ ++ G G H+ + ++ + + YN VI + KA
Sbjct: 610 EMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAH 669
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
DL + +++ +M + +P T++++ G
Sbjct: 670 DLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYG 704
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 140/327 (42%), Gaps = 9/327 (2%)
Query: 173 EGIEPTPELYTALLAAYCRNSLIDEA---FVTLNQMKTLPNCQPDVYTYSTLIKACVDAM 229
E P+ + AL++ +C+ +D A F + + LP DVY+Y+ L+ A
Sbjct: 264 EEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLP----DVYSYNILLHGLCVAG 319
Query: 230 RFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM 289
E DM+ V P+ VT NI+ G+ G+ +V+ ML + PD+ T
Sbjct: 320 SMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGL-NPDLVTY 378
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
++ G ++ + EK + G+ T+ +L+ + K D+ ++ M
Sbjct: 379 TILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEV 438
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
+ TY+ +I G + +E+M ++ + ++ +I+G G +
Sbjct: 439 IGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISE 498
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+K +AE + YN +I K ++ E R YK++ EK P TF+ +
Sbjct: 499 AQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIY 558
Query: 470 AYAKEG-MNDKVYALEQEKLQMLLEAS 495
+ K+G + + V L+ K+ L+ S
Sbjct: 559 GFCKKGKLAEAVKLLDTIKVHGLVPTS 585
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 168/386 (43%), Gaps = 39/386 (10%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMV-EEGIEPTPEL---- 181
AL +F++L+ + ++ ++ + ++ + GQ + R+V N+MV EEG P L
Sbjct: 98 ALFLFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELL 157
Query: 182 -------------YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
+ L AY R ++ +A L +MK L N Q + TY++L+ +
Sbjct: 158 CNSFRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVL-NLQVSIATYNSLL---YNL 213
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT--CKPDV 286
+++ +Y ++ V N T I++ G + +++ ++ + E+ P V
Sbjct: 214 RHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQ---SRLQDAVTFLRETGGEEFGPSV 270
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
+ N ++S F G VD+ + ++ +G+ P+ ++NIL+ + M +E+
Sbjct: 271 VSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLC---VAGSMEEALEF 327
Query: 347 MRKLQFPWTS---STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
++ TYN + F +G ++M G+ D T+ LI G+
Sbjct: 328 TNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQ 387
Query: 404 AGLFHKVISSVRLASKL---QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
G + S +L K+ + ++ Y ++S+ K+ + E + M+ +PD
Sbjct: 388 MG---NIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPD 444
Query: 461 SETFSIMTEAYAKEGMNDKVYALEQE 486
T+S++ K G ++ L +E
Sbjct: 445 LLTYSVLIHGLCKRGAVEEAIELYEE 470
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 152/360 (42%), Gaps = 18/360 (5%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+ P ++ L+ K G ++A+ F M++ G+ P Y LL C ++EA
Sbjct: 266 FGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEAL 325
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL------YQDMDERSVTPNTVTQ 253
N M+ +PD+ TY+ L A F ++ + Q M + P+ VT
Sbjct: 326 EFTNDMEN-HGVEPDIVTYNIL------ANGFRILGLISGAWKVVQRMLLNGLNPDLVTY 378
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
I++ G+ + G ++ ++ ML S K + T +LS G++D +
Sbjct: 379 TILICGHCQMGNIEESFKLKEKML-SQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEME 437
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
G+ P+ T+++LI K+ ++ + E M + S + +I + G
Sbjct: 438 VIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAIS 497
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
+ F+ + + + + +I+GYA G + + S + + I+ + +N++I
Sbjct: 498 EAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLI 557
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG----MNDKVYALEQEKLQ 489
K L E ++ +K P S T++ + Y +EG M D ++ +E + ++
Sbjct: 558 YGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIK 617
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 122/281 (43%), Gaps = 15/281 (5%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
+ +F ++ ++ +E Y Y KL G G+ A + + +++E+GI PT
Sbjct: 500 QMYFDSVTKSDVAEEIILYNIMIDGYAKL----GNIGE---AVRSYKQIIEKGISPTIVT 552
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+ +L+ +C+ + EA L+ +K + P TY+TL+ + + + +M
Sbjct: 553 FNSLIYGFCKKGKLAEAVKLLDTIK-VHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEM 611
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ +++ P +T +V+ G K G + ++L M PD T NT++ F
Sbjct: 612 EAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGL-FPDQITYNTVIQSFCKAHD 670
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGA---YGKKRMYDKMSSVMEYMRKLQFPWTSST 358
+ + + + + P T+N+LI YG + D++ + ++ T
Sbjct: 671 LQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRL---LVTLQDQSIRLTKVA 727
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
Y +I+A GD ++ F QM G + + + +IN
Sbjct: 728 YTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVIN 768
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 105/267 (39%), Gaps = 3/267 (1%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
K + +A+++ + +K P TY L+ + G + +EM + I+PT
Sbjct: 563 KGKLAEAVKLLDTIKVHGLV-PTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQI 621
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
YT ++ C+ + E+ L M PD TY+T+I++ A + L+
Sbjct: 622 TYTVVVKGLCKEGRLHESVQLLKYMYA-RGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQ 680
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M + S+ P+ VT N+++ G G +R+L L+ + + TI+ KG
Sbjct: 681 MLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLV-TLQDQSIRLTKVAYTTIIKAHCAKG 739
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
V ++ + G + R ++ +I K+ + M P
Sbjct: 740 DVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICL 799
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGM 387
++ AF GD + F M G+
Sbjct: 800 VMLNAFHRSGDPNSVFEIFAMMIKCGL 826
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 169/424 (39%), Gaps = 44/424 (10%)
Query: 108 VNTVAETFSDHVLKKQWF------QALQVFEMLKEQ-PFYQPKEGTYMKLLVLLGKSGQP 160
+ V + FS ++L K QA + M+ E P Y ++ K G
Sbjct: 178 LGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDV 237
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
A +F EMV+ GI P Y++++ A C+ +D+A L QM PD +TY+
Sbjct: 238 NKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVN-KGVLPDNWTYNN 296
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
LI +++ ++++M +S+ P+ V N ++G K G + V M
Sbjct: 297 LIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKG 356
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
PDV++ +L+ +A KG + M ++ GI P+ TFN+LI AY M DK
Sbjct: 357 Q-NPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKA 415
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+ MR TY VI A +G F QM +G+ D + CLI G
Sbjct: 416 MIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQG 475
Query: 401 YANAG----------------------LFHKVISSVRLASKLQIAENV------------ 426
+ G F +I+++ ++ A+N+
Sbjct: 476 FCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPD 535
Query: 427 -SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
YN ++ + + RV+ M P+ + + Y K G D+ +L +
Sbjct: 536 AVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFR 595
Query: 486 EKLQ 489
E LQ
Sbjct: 596 EMLQ 599
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 147/347 (42%), Gaps = 4/347 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ ++ +PELA F +++ G+ + + LL +C DEA
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS--VTPNTVTQNIVLGG 259
L C PDV++Y+ L+K+ + + + L + M E +P+ V N V+ G
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ K G ++ + M++ PD+ T ++++ +D E + + N G+ P
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGI-PPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 289
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ T+N LI Y + + V + MR+ N ++ + G K F
Sbjct: 290 DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVF 349
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
+ M +G D ++ ++NGYA G + L IA ++ +N +I A
Sbjct: 350 DTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANC 409
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALEQ 485
L + ++ M++ +P T+ + A + G M+D + Q
Sbjct: 410 GMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQ 456
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 150/365 (41%), Gaps = 5/365 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
QW +A++VF+ ++ Q P L+ L K G+ + AR VF+ M +G P Y
Sbjct: 306 QWKEAVRVFKEMRRQSIL-PDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 364
Query: 183 TALLAAYC-RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
T +L Y + L+D L + PD+YT++ LIKA + + ++ +M
Sbjct: 365 TIMLNGYATKGCLVD--MTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEM 422
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ V P+ VT V+ + G D + M++ PD + + ++ F G
Sbjct: 423 RDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVV-PDKYAYHCLIQGFCTHGS 481
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ + + N G+ + F +I K ++ + + + YN
Sbjct: 482 LLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNM 541
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+++ + +G + F+ M + G++ + + L+NGY G + +S R +
Sbjct: 542 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKG 601
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
I + YN +I +A + + + M E + T+SI+ K D+
Sbjct: 602 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAI 661
Query: 482 ALEQE 486
L +E
Sbjct: 662 FLFKE 666
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 137/336 (40%), Gaps = 4/336 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ G + A +FNEM + G++P Y ++AA CR +D+A
Sbjct: 394 PDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK 453
Query: 202 LNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
NQM PD Y Y LI+ C + E + + M+ + + V ++
Sbjct: 454 FNQMID-QGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNN-GMRLDIVFFGSIINNL 511
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + + + + PD N ++ + G+++ R ++ + GI+P
Sbjct: 512 CKLGRVMDAQNIFD-LTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 570
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+ L+ Y K D+ S+ M + ++ YN +I+ + G + F
Sbjct: 571 VVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFH 630
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M G+ + T+ ++ G F + I + + + ++ N +I+ +
Sbjct: 631 EMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTR 690
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ E + ++ + P + T+SIM KEG+
Sbjct: 691 RVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGL 726
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 7/199 (3%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+ L +F EML Q +P Y ++ L ++G+ A+ F+EM E GI Y+
Sbjct: 589 EGLSLFREML--QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSI 646
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
+L +N DEA +++ + N + D+ T +T+I R E + L+ +
Sbjct: 647 VLRGLFKNRCFDEAIFLFKELRAM-NVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 705
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ P VT +I++ K G+ ++ E + S M ++A C+PD +N ++ K ++
Sbjct: 706 GLVPCAVTYSIMITNLLKEGLVEEAEDMFSSM-QNAGCEPDSRLLNHVVRELLKKNEIVR 764
Query: 305 MERWYEKF--RNFGIDPET 321
+ K RNF ++ T
Sbjct: 765 AGAYLSKIDERNFSLEHLT 783
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 100/239 (41%), Gaps = 2/239 (0%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L K G+ A+ +F+ V G+ P +Y L+ YC +++A + M + +P
Sbjct: 511 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVS-AGIEP 569
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
+V Y TL+ R + +L+++M ++ + P+T+ NI++ G +AG +
Sbjct: 570 NVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKF 629
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
M ES + +F N+ D +++ R + + T N +I +
Sbjct: 630 HEMTESGIAMNKCTYSIVLRGLFKNR-CFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQ 688
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
R ++ + + + + TY+ +I G + E F M G + D++
Sbjct: 689 TRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSR 747
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 166/383 (43%), Gaps = 9/383 (2%)
Query: 87 KRTPIKNLKKKLERKAKAKAWVNTVA-ETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEG 145
KR ++ +K ++ A N V F + K+ + L E+
Sbjct: 237 KRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVV 296
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ G+ E A+++F EM E+GIE +YT++++ CR+ + A V ++M
Sbjct: 297 TYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEM 356
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
T P +TY LI A + E + L +M + + N V N ++ GY ++GM
Sbjct: 357 -TDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGM 415
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D+ R L ++E + DV+ N+I S + D + G+ P T +F
Sbjct: 416 VDEALR-LQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFT 474
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
LI Y K+ + + V M + TYN +I+ +S G+ K +++
Sbjct: 475 TLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENR 534
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKL---QIAENVSFYNAVISACIKADDL 442
G+ D T LI+G G KV +++L ++ + NV Y A+IS K
Sbjct: 535 GLIPDVYTCTSLIHGECIDG---KVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRS 591
Query: 443 MEMERVYKRMKEKHCRPDSETFS 465
E ++Y MKE PD +S
Sbjct: 592 EEAFKLYDEMKETGLTPDDTVYS 614
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/397 (20%), Positives = 160/397 (40%), Gaps = 32/397 (8%)
Query: 110 TVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPEL------- 162
TV S+H+L + L F +++ +Y+P Y+ L+ L +S + +
Sbjct: 56 TVHLILSNHILTAE--SCLDFFHFIRKN-YYKPDLRAYITLIFKLYRSRKSDKLHKSQKF 112
Query: 163 --ARKVFN-EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYS 219
R +FN V++G+ + +L+ C S + A L D +
Sbjct: 113 AEIRHLFNCAAVDDGLRVPVTVIASLVDDACNESKCNRAKFKEKFFDLLFRVYADNKMFG 172
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
++A FE +E +DERS + L + G D R M+ +
Sbjct: 173 EALEA------FEHMEKKGFHIDERSCL-------VYLLALRRGGQVDSCLRFFRRMV-N 218
Query: 280 ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
+ V+++ +L +G V+M + ++ G+ T+N I Y K+
Sbjct: 219 LDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGG 278
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
++ ++ M K TY +I FS++G + + FE+M +G++AD + +I+
Sbjct: 279 VAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIIS 338
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
+G + + + + + Y A+I KA + + + M+ K
Sbjct: 339 CNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDL 398
Query: 460 DSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
+ F+ + + Y + GM D E +LQ+++E G
Sbjct: 399 NPVIFNTLIDGYCESGMVD-----EALRLQVVMEKKG 430
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/399 (18%), Positives = 148/399 (37%), Gaps = 71/399 (17%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K + +AL+ FE ++++ F+ + + LL L + GQ + + F MV +E T
Sbjct: 169 KMFGEALEAFEHMEKKGFHIDERSCLVYLLALR-RGGQVDSCLRFFRRMVNLDVEVTVYS 227
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
T +L C+ ++ ++++ + +V TY+ I+ + + + M
Sbjct: 228 LTIVLDGLCKRGDVEMGRKLMDEVAA-KGVKANVVTYNAFIEGYFKRLDLGGVAEILTLM 286
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE--------------SATCK---- 283
++ V N VT +++ G+ G ++ +R+ M E S C+
Sbjct: 287 EKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNV 346
Query: 284 ----------------PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
P T ++ GQ++ + + + GID FN L
Sbjct: 347 KRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTL 406
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
I Y + M D+ + M K YN++ + + M G+
Sbjct: 407 IDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGV 466
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
+T +F LI+ Y G F +E +R
Sbjct: 467 SPNTMSFTTLIDIYCKEGNF-----------------------------------VEAKR 491
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
V++ M+EK P+ T++++ + Y+K G + + L+ E
Sbjct: 492 VFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDE 530
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 14/174 (8%)
Query: 97 KLERKAKAKAWVNTVAE-----------TFSDHVLKKQWF-QALQVFEMLKEQPFYQPKE 144
KL RK +AK + ++ E T D K+ F +A +VF ++E+ P
Sbjct: 447 KLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKG-NVPNI 505
Query: 145 GTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQ 204
TY L+ K G + A K+ +E+ G+ P T+L+ C + +D A ++
Sbjct: 506 ITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDE 565
Query: 205 MKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
M P+V TY+ +I R E LY +M E +TP+ + ++G
Sbjct: 566 MPQ-RGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVG 618
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 76/208 (36%)
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
+ + V+A+ +E G + R+ + + A + D M
Sbjct: 159 DLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVN 218
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
L T + V++ GD + +++ A+G+KA+ T+ I GY
Sbjct: 219 LDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGG 278
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
V + L K +A NV Y +I + E +R+++ M+EK D ++ +
Sbjct: 279 VAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIIS 338
Query: 470 AYAKEGMNDKVYALEQEKLQMLLEASGH 497
+ G + L E L S H
Sbjct: 339 CNCRSGNVKRALVLFDEMTDKGLIPSAH 366
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 12/143 (8%)
Query: 55 FSSESAVAAKKRLWKE----GEYPGVS--ETSIPGYRSKRTPIK---NLKKKLERKAKAK 105
+ E KR+++E G P + I GY SKR +K LK +LE +
Sbjct: 480 YCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGY-SKRGNMKEAHKLKDELENRGLIP 538
Query: 106 AWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARK 165
V T + + AL++F+ + ++ P TY ++ L K G+ E A K
Sbjct: 539 D-VYTCTSLIHGECIDGKVDMALKLFDEMPQRGLV-PNVVTYTAMISGLSKDGRSEEAFK 596
Query: 166 VFNEMVEEGIEPTPELYTALLAA 188
+++EM E G+ P +Y++L+ +
Sbjct: 597 LYDEMKETGLTPDDTVYSSLVGS 619
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 184/407 (45%), Gaps = 29/407 (7%)
Query: 83 GYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQP 142
GY+ + L K L K + K ++ F D V+ Q FQ QV
Sbjct: 75 GYQPNTIILNTLMKGLCLKGEVKKSLH-----FHDKVVA-QGFQMDQV------------ 116
Query: 143 KEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTL 202
+Y LL L K G+ A K+ + + P +Y+ ++ C++ L+DEA+
Sbjct: 117 ---SYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLY 173
Query: 203 NQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET--LYQDMDERSVTPNTVTQNIVLGGY 260
++M PDV TY+TLI C + +L+E L +M +++ PN T N ++
Sbjct: 174 SEMNA-RGIFPDVITYTTLI--CGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTL 230
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + + +L+ M + KPDV + ++ + G+V ++ + G++P+
Sbjct: 231 CKEGKVKESKNLLAVMTKKGV-KPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPD 289
Query: 321 TRTFNILIGAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
++NI+I K KR+ + M+ + E + K P T TY+++I+ +G +
Sbjct: 290 VYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDT-VTYSSLIDGLCKLGRITTILDLT 348
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
++MH G A+ T+ L++G K I+ + I N Y A+I K
Sbjct: 349 KEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKG 408
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
L + + +++ + K D T+++M KEGM D+ A++ +
Sbjct: 409 GRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSK 455
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 150/327 (45%), Gaps = 8/327 (2%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A +++EM GI P YT L+ +C + EAF LN+M L N P++YTY+TLI
Sbjct: 169 AYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEM-ILKNINPNIYTYNTLI 227
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
+ + + L M ++ V P+ V +I++ GY G + +++ M+++
Sbjct: 228 DTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGV- 286
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
PDV++ N I++ +VD + + + P+T T++ LI K ++++
Sbjct: 287 NPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCK---LGRITT 343
Query: 343 VMEYMRKLQF---PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+++ +++ P TYN++++ + F +M G++ + T+ LI+
Sbjct: 344 ILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALID 403
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
G G K + + +V Y +IS K E + +M++ C P
Sbjct: 404 GLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIP 463
Query: 460 DSETFSIMTEAYAKEGMNDKVYALEQE 486
++ TF I+ + ++ NDK L E
Sbjct: 464 NAVTFEIIIRSLLEKDENDKAEKLLHE 490
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 94/251 (37%), Gaps = 44/251 (17%)
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
G+ + A+++F MV+ G+ P Y ++ C+ +DEA L +M N PD T
Sbjct: 269 GEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLH-KNMIPDTVT 327
Query: 218 YSTLIKACVDAMRFELIE-----------------------------------TLYQDMD 242
YS+LI R I L+ M
Sbjct: 328 YSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMK 387
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
ER + PN T ++ G K G + + + +L C DVWT ++S +G
Sbjct: 388 ERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYC-IDVWTYTVMISGLCKEGMF 446
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM-EYMRKLQFPW------T 355
D K + G P TF I+I + +K DK ++ E + K P+
Sbjct: 447 DEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLPFRNFHSER 506
Query: 356 SSTYNNVIEAF 366
SS N VI F
Sbjct: 507 SSVTNKVIVNF 517
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 76/182 (41%), Gaps = 10/182 (5%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L K G+ + EM G Y +LL C+N +D+A
Sbjct: 323 PDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIAL 382
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+MK QP+ YTY+ LI R + + L+Q + + + T +++ G
Sbjct: 383 FMKMKE-RGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLC 441
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK--------FR 313
K GMFD+ + S M E C P+ T I+ K + D E+ + FR
Sbjct: 442 KEGMFDEALAMKSKM-EDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLPFR 500
Query: 314 NF 315
NF
Sbjct: 501 NF 502
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 78/164 (47%), Gaps = 5/164 (3%)
Query: 86 SKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWF-QALQVFEMLKEQPFYQPKE 144
+ T I +L K++ + + V + D + K Q +A+ +F +KE+ QP +
Sbjct: 339 GRITTILDLTKEMHHRGQPANLVT--YNSLLDGLCKNQNLDKAIALFMKMKERGI-QPNK 395
Query: 145 GTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQ 204
TY L+ L K G+ + + +F ++ +G YT +++ C+ + DEA ++
Sbjct: 396 YTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSK 455
Query: 205 MKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP 248
M+ C P+ T+ +I++ ++ + E L +M + + P
Sbjct: 456 MED-NGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 84/238 (35%), Gaps = 35/238 (14%)
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
LS +E+ PD+ T++ +++ F + GQ+ K G P T N L+
Sbjct: 32 LSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLC 91
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK---HMEYTFE--------- 380
K K + + F +Y ++ +G+ + + T E
Sbjct: 92 LKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVV 151
Query: 381 -----------------------QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
+M+A G+ D T+ LI G+ AG + +
Sbjct: 152 MYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEM 211
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
I N+ YN +I K + E + + M +K +PD +SI+ + Y G
Sbjct: 212 ILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVG 269
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 69/171 (40%)
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
GI P+ T +ILI + SV+ + KL + + N +++ G+ K
Sbjct: 40 GIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKS 99
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
+ +++ A+G + D ++ L+NG G I +R +V Y+ +I
Sbjct: 100 LHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDG 159
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
K + E +Y M + PD T++ + + G + + L E
Sbjct: 160 LCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNE 210
>gi|242038267|ref|XP_002466528.1| hypothetical protein SORBIDRAFT_01g009420 [Sorghum bicolor]
gi|241920382|gb|EER93526.1| hypothetical protein SORBIDRAFT_01g009420 [Sorghum bicolor]
Length = 595
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 138/307 (44%), Gaps = 6/307 (1%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
YTALL +CR +DEA L +MK + DV ++TL+ V RFE L M
Sbjct: 192 YTALLYGWCRQGKLDEAKHVLARMKA-ADVALDVVAFNTLLAGFVADGRFEDAFELTGQM 250
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
++R PN V+ ++ G G G D+ RV M C PD T T++S F G+
Sbjct: 251 EQRGCPPNAVSYTTLIQGLGARGRVDEAMRVFVEMRRKG-CAPDAVTYGTLVSTFCKAGK 309
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ + + G+ + ++ A+ KK ++ +ME MR+ + P YN
Sbjct: 310 ISQGYEFLDAISRDGLRVDAAVYHGFFVAHEKKEQLEECLELMERMRECRCPPDLKIYNV 369
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR--LASK 419
VI +G+ K + +M G+ TF ++NG GL + S + +
Sbjct: 370 VIRLACRLGETKQAMSLWNEMETGGLSPGVDTFAIMVNGLVGQGLLVEACSYFKDMVGRG 429
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA-YAKEGMND 478
L +A +++A ++ + L + V++ + K C + ++I A YAK+ + +
Sbjct: 430 LFVAPQYGVLKDLLNALVRDEKLELAKDVWECIASKGCELNVSAWTIWIHALYAKKHVKE 489
Query: 479 K-VYALE 484
+Y L+
Sbjct: 490 ACLYCLD 496
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/197 (17%), Positives = 79/197 (40%)
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
+L + +G++D + + + + + FN L+ + ++ + M +
Sbjct: 193 TALLYGWCRQGKLDEAKHVLARMKAADVALDVVAFNTLLAGFVADGRFEDAFELTGQMEQ 252
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
P + +Y +I+ G F +M +G D T+ L++ + AG +
Sbjct: 253 RGCPPNAVSYTTLIQGLGARGRVDEAMRVFVEMRRKGCAPDAVTYGTLVSTFCKAGKISQ 312
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+ S+ + + + Y+ A K + L E + +RM+E C PD + ++++
Sbjct: 313 GYEFLDAISRDGLRVDAAVYHGFFVAHEKKEQLEECLELMERMRECRCPPDLKIYNVVIR 372
Query: 470 AYAKEGMNDKVYALEQE 486
+ G + +L E
Sbjct: 373 LACRLGETKQAMSLWNE 389
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 149/351 (42%), Gaps = 8/351 (2%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y P + L+ L K + A+ +F E+ + G+ PT + L+ YC++ +D+ F
Sbjct: 221 YPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGF 280
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L + PDV+TYS LI + + L+ +M +R + PN VT ++ G
Sbjct: 281 -RLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING 339
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ G D + ML KPDV T NT+++ G + ++ + G+ P
Sbjct: 340 HCVTGRADLGMEIYQQMLRKGV-KPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKP 398
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ T+ +LI K+ + + + M K + + +I F G E T
Sbjct: 399 DKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTL 458
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI---AENVSFYNAVISAC 436
+M G+K D T+ +I+G+ G V + +L ++Q V YN +++
Sbjct: 459 REMLEAGIKPDDATYTMVIHGFCKKG---DVKTGFKLLKEMQCDGHVPGVVTYNVLLNGL 515
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEK 487
K + + M PD T++I+ E + K G + L+ EK
Sbjct: 516 CKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKLQSEK 566
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/138 (18%), Positives = 57/138 (41%)
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
+P +N ++ + F ++ G++ +F LINGY +G +
Sbjct: 221 YPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGF 280
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
R + ++ +V Y+ +I+ K L + +++ M ++ P+ TF+ + +
Sbjct: 281 RLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGH 340
Query: 472 AKEGMNDKVYALEQEKLQ 489
G D + Q+ L+
Sbjct: 341 CVTGRADLGMEIYQQMLR 358
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 174/407 (42%), Gaps = 44/407 (10%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
AL+VF+++ ++ P +Y L+ L + G+ E A + ++M E+G +P+ YT L
Sbjct: 248 DALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVL 307
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLP-NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
+ A C LID+AF ++M +P C+P+V+TY+ LI + E + + M +
Sbjct: 308 IKALCDRGLIDKAFNLFDEM--IPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD 365
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ P+ +T N ++ GY K G +L+ ++E CKP+V T N ++ G+
Sbjct: 366 RIFPSVITYNALINGYCKDGRVVPAFELLT-VMEKRACKPNVRTFNELMEGLCRVGKPYK 424
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
++ + G+ P+ ++N+LI ++ + ++ M T+ +I
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG------LFHKVISSVRLAS 418
AF G A M +G+ D T LI+G G + + +R+ +
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT 544
Query: 419 -----------------------------KLQIAENVSFYNAVISACIKADDLMEMERVY 449
KL + +V Y ++ I++ D+ R+
Sbjct: 545 TPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL 604
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
+ MK C P+ ++I+ + G + E EKL ++ SG
Sbjct: 605 ELMKLSGCLPNVYPYTIIINGLCQFGRVE-----EAEKLLSAMQDSG 646
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 135/342 (39%), Gaps = 8/342 (2%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y ++ L K+G E A +++++ G + T+LL +CR + +A + M
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
C P+ +YS LI + R E L M E+ P+T T +++ G+
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
D+ + M+ CKP+V T ++ G+++ K I P T+N
Sbjct: 318 DKAFNLFDEMIPRG-CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNA 376
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
LI Y K ++ M K T+N ++E +G + ++M G
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 387 MKADTKTFCCLINGYANAGLF---HKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
+ D ++ LI+G G +K++SS+ I + + A+I+A K
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNC---FDIEPDCLTFTAIINAFCKQGKAD 493
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALE 484
M K D T + + + K G D ++ LE
Sbjct: 494 VASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILE 535
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 146/380 (38%), Gaps = 76/380 (20%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L + G+ E A V +MV++ I P+ Y AL+ YC++ + AF
Sbjct: 333 KPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFE 392
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L M+ C+P+V T++ L++ C ++ + L + +D ++P+ V+ N+++ G
Sbjct: 393 LLTVMEKRA-CKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN-GLSPDIVSYNVLIDG 450
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ G + ++LS M +PD T I++ F +G+ D+ + GI
Sbjct: 451 LCREGHMNTAYKLLSSM-NCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISL 509
Query: 320 ETRTFNILIGAY---GKKR-----------------------MYDKMS---------SVM 344
+ T LI GK R + D +S +++
Sbjct: 510 DEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAML 569
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
+ KL + TY +++ GD E M G + + +ING
Sbjct: 570 GKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQF 629
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
G E E++ M++ P+ T+
Sbjct: 630 GRVE-----------------------------------EAEKLLSAMQDSGVSPNHVTY 654
Query: 465 SIMTEAYAKEGMNDKVYALE 484
++M + Y G D+ ALE
Sbjct: 655 TVMVKGYVNNGKLDR--ALE 672
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
G+ P+ YT L+ R+ I +F L MK L C P+VY Y+ +I R E
Sbjct: 576 GLVPSVVTYTTLVDGLIRSGDITGSFRILELMK-LSGCLPNVYPYTIIINGLCQFGRVEE 634
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
E L M + V+PN VT +++ GY G D+ + M+E
Sbjct: 635 AEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVE 679
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/350 (19%), Positives = 140/350 (40%), Gaps = 47/350 (13%)
Query: 58 ESAVAAKKRLWKEGEYPGVSETS--IPGY--RSKRTPIKNLKKKLERKAKAKAWVNTVAE 113
E A +++ K+ +P V + I GY + P L +E++A K V T E
Sbjct: 353 EEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA-CKPNVRTFNE 411
Query: 114 TFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE 173
+ ++A+ + + + + P +Y L+ L + G A K+ + M
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGL-SPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCF 470
Query: 174 GIEPTPELYTALLAAYCRNSLID--EAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMR- 230
IEP +TA++ A+C+ D AF+ L K + D T +TLI +
Sbjct: 471 DIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGI---SLDEVTGTTLIDGVCKVGKT 527
Query: 231 ---FELIETLYQ--------------DM-----------------DERSVTPNTVTQNIV 256
++ETL + DM ++ + P+ VT +
Sbjct: 528 RDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTL 587
Query: 257 LGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG 316
+ G ++G R+L +++ + C P+V+ I++ G+V+ E+ ++ G
Sbjct: 588 VDGLIRSGDITGSFRILE-LMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSG 646
Query: 317 IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ P T+ +++ Y D+ + M + + Y+++++ F
Sbjct: 647 VSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/430 (20%), Positives = 178/430 (41%), Gaps = 74/430 (17%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A ++ E L+E+ P ++ +L LGK + + A +F E++++ EP Y ++
Sbjct: 72 AYKLLERLRERGCI-PSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIII 129
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
C ++EA+ L++M+ + P++ T + ++ A + E +++ +R
Sbjct: 130 DMLCLGGRVEEAYRILDEMEH-ASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGC 188
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA-------------------------- 280
P+ VT ++ G GK G D+ R+ ML++
Sbjct: 189 NPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHK 248
Query: 281 --------TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
CKPD+ +NT + G+V+ +E R++G P+ R+++ILI
Sbjct: 249 IFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLT 308
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY--------------- 377
K + S++ M++ F + YN V++ F G H Y
Sbjct: 309 KAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKV-HKAYEILEEMKEKCVQPTV 367
Query: 378 ---------------------TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
FE+ ++G++ + + LI+G+ G + +
Sbjct: 368 ATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 427
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
K + NV +N+++ A +KA+++ E ++ MKE C P++ T+SI+ +
Sbjct: 428 MMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQK 487
Query: 477 NDKVYALEQE 486
+K + Q+
Sbjct: 488 YNKAFVFWQD 497
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 164/394 (41%), Gaps = 43/394 (10%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A ++FE ++ P TY L+ LGK GQ + A ++F +M++ G P +YT+L
Sbjct: 175 EAYKIFESASQRGC-NPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSL 233
Query: 186 LAAY--------------------CR------NSLIDEAF---------VTLNQMKTLPN 210
+ + C+ N+ +D F + +++
Sbjct: 234 IRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSY-G 292
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
PDV +YS LI A + ++ M ++ + N V+ G+ K+G +
Sbjct: 293 FLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAY 352
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
+L M E +P V T I+ A ++D +E+ ++ GI+ ++ LI
Sbjct: 353 EILEEMKEKCV-QPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDG 411
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
+GK D+ ++E M K T+N++++A + F+ M +
Sbjct: 412 FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPN 471
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
T T+ LING ++K + K + NV Y +IS K ++ + +++
Sbjct: 472 TYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFE 531
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
R K PD+ +F+ + EGM++ A+E
Sbjct: 532 RFKANGGIPDAASFNALI-----EGMSNANRAME 560
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 135/318 (42%), Gaps = 11/318 (3%)
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
+A K F+E+ +G++P YT+++ C+ + EA QM+ P Y Y+T+
Sbjct: 1 MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEA-ERSVPCAYAYNTM 59
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
I A RFE L + + ER P+ V+ N +L GK D+ + M + A
Sbjct: 60 IMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA- 118
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
+P+ T N I+ + G+V+ R ++ + + P T NI++ K R ++
Sbjct: 119 -EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAY 177
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+ E + TY ++I+ G FE+M G A+ + LI +
Sbjct: 178 KIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNF 237
Query: 402 ANAGL---FHKVISS-VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
G HK+ +R K +++ N + KA ++ + +++ ++
Sbjct: 238 FIHGRKEDGHKIFKELIRRGCK----PDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGF 293
Query: 458 RPDSETFSIMTEAYAKEG 475
PD ++SI+ K G
Sbjct: 294 LPDVRSYSILIHGLTKAG 311
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 116/285 (40%), Gaps = 16/285 (5%)
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
+PD +Y+++I A R E L+ M+ P N ++ GYG AG F+ +
Sbjct: 15 KPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYK 74
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+L + E C P V + N+IL+ K +VD +E + +P + T+NI+I
Sbjct: 75 LLERLRERG-CIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDML 132
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
++ +++ M T N +++ + FE G D
Sbjct: 133 CLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDC 192
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIA---ENVSFYNAVISACIKADDLMEMERV 448
T+C LI+G G +V + RL K+ A N Y ++I + ++
Sbjct: 193 VTYCSLIDGLGKKG---QVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKI 249
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
+K + + C+PD + + K G E EK +M+ E
Sbjct: 250 FKELIRRGCKPDLTLLNTYMDCVFKAG--------EVEKGRMIFE 286
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 159/345 (46%), Gaps = 4/345 (1%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y+P T L+ + + A + ++MVE G P Y A++ + C+ +++A
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDAL 210
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
++ +P+V TY+ L+ ++ R+ L +DM +R +TPN +T + +L
Sbjct: 211 DFFKEIGR-KGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDA 269
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ K G + + + M+ + PD+ T +++++ ++D + ++ + G P
Sbjct: 270 FVKNGKVLEAKEIFEEMVRMSI-DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFP 328
Query: 320 ETRTFNILIGAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
+ ++N LI + K KR+ D M + M + + TYN +I+ F +GD +
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMK-LFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEF 387
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
F QM + G+ D T+ L+ G + GL K + K ++ ++ Y VI K
Sbjct: 388 FSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCK 447
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ + ++ + K +PD T++ M +G+ +V AL
Sbjct: 448 TGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEAL 492
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 143/337 (42%), Gaps = 39/337 (11%)
Query: 159 QPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTY 218
Q LA V +M++ G EP +L+ +CR + + +A +++M + +PD+ Y
Sbjct: 135 QVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY-RPDIVAY 193
Query: 219 STLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
+ +I + R ++++ + + PN VT ++ G +G ++ R+L M++
Sbjct: 194 NAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIK 253
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
P+V T + +L F G+V + +E+ IDP+ T++ LI ++D
Sbjct: 254 RKI-TPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLC---LHD 309
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
++ +A M F+ M ++G D ++ LI
Sbjct: 310 RID-----------------------------EANQM---FDLMVSKGCFPDVVSYNTLI 337
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
NG+ A + R S+ + N YN +I + D+ + + + +M
Sbjct: 338 NGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVS 397
Query: 459 PDSETFSIMTEAYAKEGMNDKVYAL--EQEKLQMLLE 493
PD T++I+ G+ +K + + +K +M L+
Sbjct: 398 PDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLD 434
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 107/268 (39%), Gaps = 79/268 (29%)
Query: 123 QWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
+W A ++ +M+K + P TY LL K+G+ A+++F EMV I+P
Sbjct: 240 RWNDAARLLRDMIKRK--ITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVT 297
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTL---PNCQPDVYTYSTLIKACVDAMRFE------ 232
Y++L+ C + IDEA NQM L C PDV +Y+TLI A R E
Sbjct: 298 YSSLINGLCLHDRIDEA----NQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 233 -----------------LIETLYQ------------DMDERSVTPNTVTQNIVLGGYGKA 263
LI+ +Q MD V+P+ T NI+LGG
Sbjct: 354 RKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDN 413
Query: 264 GM-------FDQMER------------VLSGMLESATC---------------KPDVWTM 289
G+ F+ M++ V+ GM ++ KPD+ T
Sbjct: 414 GLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTY 473
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGI 317
T++S KG +E Y K + G+
Sbjct: 474 TTMMSGLCTKGLQHEVEALYTKMKQEGL 501
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 25/191 (13%)
Query: 76 VSETSIPGYRSKRTPIKNLKK--------KLERKAKAKAWVNTVAETFSDHVLKKQWFQA 127
VS+ P S T I K KL RK + VN T + + L + +FQ
Sbjct: 322 VSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVN---NTVTYNTLIQGFFQ- 377
Query: 128 LQVFEMLKEQPFYQ--------PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
V ++ K Q F+ P TY LL L +G E A +F +M + ++
Sbjct: 378 --VGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDI 435
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLY 238
YT ++ C+ +++A+ + +L +PD+ TY+T++ C ++ E +E LY
Sbjct: 436 VTYTTVIQGMCKTGKVEDAWGLFCSL-SLKGLKPDIVTYTTMMSGLCTKGLQHE-VEALY 493
Query: 239 QDMDERSVTPN 249
M + + N
Sbjct: 494 TKMKQEGLMKN 504
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 166/383 (43%), Gaps = 9/383 (2%)
Query: 87 KRTPIKNLKKKLERKAKAKAWVNTVA-ETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEG 145
KR ++ +K ++ A N V F + K+ + L E+
Sbjct: 241 KRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVV 300
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ G+ E A+++F EM E+GIE +YT++++ CR+ + A V ++M
Sbjct: 301 TYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEM 360
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
T P +TY LI A + E + L +M + + N V N ++ GY ++GM
Sbjct: 361 -TDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGM 419
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D+ R L ++E + DV+ N+I S + D + G+ P T +F
Sbjct: 420 VDEALR-LQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFT 478
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
LI Y K+ + + V M + TYN +I+ +S G+ K +++
Sbjct: 479 TLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENR 538
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKL---QIAENVSFYNAVISACIKADDL 442
G+ D T LI+G G KV +++L ++ + NV Y A+IS K
Sbjct: 539 GLIPDVYTCTSLIHGECIDG---KVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRS 595
Query: 443 MEMERVYKRMKEKHCRPDSETFS 465
E ++Y MKE PD +S
Sbjct: 596 EEAFKLYDEMKETGLTPDDTVYS 618
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 131/294 (44%), Gaps = 38/294 (12%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F+ + ++ P TY L+ + K+GQ E A+ + NEM +GI+ P ++ L
Sbjct: 352 RALVLFDEMTDKGLI-PSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTL 410
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMR--------FELIET- 236
+ YC + ++DEA + L + + DV+ Y+++ R F ++E
Sbjct: 411 IDGYCESGMVDEA-LRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERG 469
Query: 237 --------------------------LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
++++M+E+ PN +T N+++ GY K G +
Sbjct: 470 VSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAH 529
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
+ L LE+ PDV+T +++ G+VDM + +++ G+ P T+ +I
Sbjct: 530 K-LKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISG 588
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
K ++ + + M++ + Y++++ + ++ M+ Q+ A
Sbjct: 589 LSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSADESISMQIQGSQVKA 642
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/397 (20%), Positives = 160/397 (40%), Gaps = 32/397 (8%)
Query: 110 TVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPEL------- 162
TV S+H+L + L F +++ +Y+P Y+ L+ L +S + +
Sbjct: 60 TVHLILSNHILTAE--SCLDFFHFIRKN-YYKPDLRAYITLIFKLYRSRKSDKLHKSQKF 116
Query: 163 --ARKVFN-EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYS 219
R +FN V++G+ + +L+ C S + A L D +
Sbjct: 117 AEIRHLFNCAAVDDGLRVPVTVIASLVDDACNESKCNRAKFKEKFFDLLFRVYADNKMFG 176
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
++A FE +E +DERS + L + G D R M+ +
Sbjct: 177 EALEA------FEHMEKKGFHIDERSCL-------VYLLALRRGGQVDSCLRFFRRMV-N 222
Query: 280 ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
+ V+++ +L +G V+M + ++ G+ T+N I Y K+
Sbjct: 223 LDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGG 282
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
++ ++ M K TY +I FS++G + + FE+M +G++AD + +I+
Sbjct: 283 VAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIIS 342
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
+G + + + + + Y A+I KA + + + M+ K
Sbjct: 343 CNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDL 402
Query: 460 DSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
+ F+ + + Y + GM D E +LQ+++E G
Sbjct: 403 NPVIFNTLIDGYCESGMVD-----EALRLQVVMEKKG 434
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/399 (18%), Positives = 148/399 (37%), Gaps = 71/399 (17%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K + +AL+ FE ++++ F+ + + LL L + GQ + + F MV +E T
Sbjct: 173 KMFGEALEAFEHMEKKGFHIDERSCLVYLLALR-RGGQVDSCLRFFRRMVNLDVEVTVYS 231
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
T +L C+ ++ ++++ + +V TY+ I+ + + + M
Sbjct: 232 LTIVLDGLCKRGDVEMGRKLMDEVAA-KGVKANVVTYNAFIEGYFKRLDLGGVAEILTLM 290
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE--------------SATCK---- 283
++ V N VT +++ G+ G ++ +R+ M E S C+
Sbjct: 291 EKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNV 350
Query: 284 ----------------PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
P T ++ GQ++ + + + GID FN L
Sbjct: 351 KRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTL 410
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
I Y + M D+ + M K YN++ + + M G+
Sbjct: 411 IDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGV 470
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
+T +F LI+ Y G F +E +R
Sbjct: 471 SPNTMSFTTLIDIYCKEGNF-----------------------------------VEAKR 495
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
V++ M+EK P+ T++++ + Y+K G + + L+ E
Sbjct: 496 VFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDE 534
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 76/208 (36%)
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
+ + V+A+ +E G + R+ + + A + D M
Sbjct: 163 DLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVN 222
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
L T + V++ GD + +++ A+G+KA+ T+ I GY
Sbjct: 223 LDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGG 282
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
V + L K +A NV Y +I + E +R+++ M+EK D ++ +
Sbjct: 283 VAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIIS 342
Query: 470 AYAKEGMNDKVYALEQEKLQMLLEASGH 497
+ G + L E L S H
Sbjct: 343 CNCRSGNVKRALVLFDEMTDKGLIPSAH 370
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 153/366 (41%), Gaps = 2/366 (0%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H K +A + +K++ P TY L+ + G + A V M G EP
Sbjct: 255 HCRKGMLGEARTLLARMKKEGI-APTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEP 313
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
Y L A C+ +DEAF ++M+ L PDV TY+TL+ AC R L
Sbjct: 314 DLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNL 373
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
++M ++ V + VT NIV+ G + G ++ L M E PDV T NT++ +
Sbjct: 374 LEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLA-PDVITYNTLIDAYC 432
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
V ++ G+ +T T N L+ K++ Y++ ++ + F
Sbjct: 433 KARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEV 492
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
+Y V+ A+ + Y +++M + T+ LI G G + I +
Sbjct: 493 SYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNEL 552
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
K + + + YN +I A K DL + + + +M E + +PD T + + G
Sbjct: 553 MKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKL 612
Query: 478 DKVYAL 483
+K L
Sbjct: 613 EKAIKL 618
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 133/317 (41%), Gaps = 60/317 (18%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L + GQ E A M EEG+ P Y L+ AYC+ + +AFV +++M +
Sbjct: 396 LCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEM-VRSGLKM 454
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------MF 266
D +T +TL+ R+E E L + +R P+ V+ V+ Y K ++
Sbjct: 455 DTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLW 514
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV-DMMERWYEKFRNFGIDPETRTFN 325
D+M + P ++T NT++ G++ + +++ E + G+ P+ T+N
Sbjct: 515 DEMSK--------RKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKK-GLVPDDTTYN 565
Query: 326 ILIGAYGKK-------RMYDKM---------------------SSVMEYMRKLQFPWTSS 357
I+I AY K+ + ++KM +E KL W
Sbjct: 566 IIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEK 625
Query: 358 -------TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG----- 405
TYN +I+A GD + F M A G++ D T+ +++ + AG
Sbjct: 626 GKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEA 685
Query: 406 --LFHKVISSVRLASKL 420
+ HK+ S +L+ +
Sbjct: 686 QNMLHKLDESGKLSERF 702
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 94/196 (47%), Gaps = 7/196 (3%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P+ +T N ++ +KG + + FG+ P+ T+N L+ A+ +K M + ++
Sbjct: 208 PNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTL 267
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ M+K T +TYN ++ A++ +G K E M A G + D T+ L G
Sbjct: 268 LARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQ 327
Query: 404 AGLFHKVISSVRLASKLQ----IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
AG KV + +L +++ ++ +V YN ++ AC K + + + M++K +
Sbjct: 328 AG---KVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKS 384
Query: 460 DSETFSIMTEAYAKEG 475
T +I+ + +EG
Sbjct: 385 SLVTHNIVVKGLCREG 400
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 118/307 (38%), Gaps = 40/307 (13%)
Query: 132 EMLKEQP--FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
E+L+ P + P E +Y ++ K +PE A +++EM + + P+ Y L+
Sbjct: 477 ELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGL 536
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
C + EA LN++ PD TY+ +I A E + M E P+
Sbjct: 537 CTIGKLTEAIDKLNELMK-KGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPD 595
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
VT N ++ G G ++ ++ E K DV T NT++ G VD ++
Sbjct: 596 VVTCNTLMNGLCLHGKLEKAIKLFESWAEKGK-KVDVITYNTLIQALCKDGDVDTALHFF 654
Query: 310 EKFRNFGIDPETRTFNILIGAYGK-------KRMYDKMSSVMEYMRKLQFPWTSS----- 357
G+ P+ T+N+++ A + + M K+ + + +P S
Sbjct: 655 ADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEV 714
Query: 358 ------------------------TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+YN ++ G K + ++M +GM D+ T
Sbjct: 715 KTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSST 774
Query: 394 FCCLING 400
+ L+ G
Sbjct: 775 YITLMEG 781
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 168/367 (45%), Gaps = 21/367 (5%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y E TY L+ K G A + EM+ G+ P+ YT+L+ + C+ ++ A
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRAT 365
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L+QM+ C P+ TY+TL+ + ++M + +P+ VT N ++ G
Sbjct: 366 EFLDQMRVRGLC-PNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALING 424
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ AG VL M E PDV + +T+LS F VD R K GI P
Sbjct: 425 HCIAGKMVDAIAVLEDMKEKGL-TPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKP 483
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+T T++ LI + ++R + + + M ++ P TY +I A+ GD +
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLH 543
Query: 380 EQMHAEGMKADTKTFCCLINGYANAG-----------LFHK--VISSVRLASKLQIAENV 426
+M +G+ D T+ LING LF++ V S V + ++ N+
Sbjct: 544 NEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNI 603
Query: 427 SFYNAVISA----CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
F +V+S C+K + E ++V++ M EK+ +PD +++M + + G K Y+
Sbjct: 604 EF-KSVVSLIKGFCMKG-MMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYS 661
Query: 483 LEQEKLQ 489
L +E ++
Sbjct: 662 LYKEMVK 668
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 147/331 (44%), Gaps = 2/331 (0%)
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
A VF EM++ + P Y L+ +C +D A ++M+ C P+V TY+TL
Sbjct: 188 FAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEK-KGCLPNVVTYNTL 246
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
I + + L + M + + PN ++ N+V+ G + G ++ VL+ M +
Sbjct: 247 IDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGY 306
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
+V T NT++ + +G + + G+ P T+ LI + K ++ +
Sbjct: 307 SLDEV-TYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRAT 365
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
++ MR TY +++ FS G ++M G T+ LING+
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGH 425
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
AG I+ + + + +V Y+ V+S ++ D+ E RV ++M K +PD+
Sbjct: 426 CIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDT 485
Query: 462 ETFSIMTEAYAKEGMNDKVYALEQEKLQMLL 492
T+S + + + ++ + L E L++ L
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLFDEMLRVGL 516
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 158/361 (43%), Gaps = 10/361 (2%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
EML+ Q P TY L+ +G ++A + F+ M ++G P Y L+ YC+
Sbjct: 195 EMLQSQ--VSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCK 252
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
ID+ F L M L +P++ +Y+ +I R + I + +M++R + + V
Sbjct: 253 LRKIDDGFELLRSM-ALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEV 311
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
T N ++ GY K G F Q + + ML P V T +++ G ++ + ++
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGL-SPSVITYTSLIHSMCKAGNMNRATEFLDQ 370
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
R G+ P RT+ L+ + +K ++ V++ M F + TYN +I G
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGK 430
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL---QIAENVSF 428
E M +G+ D ++ +++G+ + + V ++R+ K+ I +
Sbjct: 431 MVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRS---YDVDEALRVKRKMVAKGIKPDTIT 487
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
Y+++I + E ++ M PD T++ + AY EG K L E +
Sbjct: 488 YSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMV 547
Query: 489 Q 489
+
Sbjct: 548 E 548
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 137/323 (42%), Gaps = 32/323 (9%)
Query: 108 VNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
V T + H + + A+ V E +KE+ P +Y +L +S + A +V
Sbjct: 415 VVTYNALINGHCIAGKMVDAIAVLEDMKEKGL-TPDVVSYSTVLSGFCRSYDVDEALRVK 473
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKA- 224
+MV +GI+P Y++L+ +C EA ++M LP PD +TY+ LI A
Sbjct: 474 RKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLP---PDEFTYTALINAY 530
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
C++ + I+ L+ +M E+ V P+ VT ++++ G K + +R+L + +
Sbjct: 531 CMEGDLQKAIQ-LHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPS 589
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
DV T +T++ +N E ++ LI + K M + V
Sbjct: 590 DV-TYHTLIENCSN--------------------IEFKSVVSLIKGFCMKGMMTEADQVF 628
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
E M + + YN +I GD + +++M G T T L+
Sbjct: 629 ESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKE 688
Query: 405 GL---FHKVISSVRLASKLQIAE 424
G + VI++V + +L AE
Sbjct: 689 GKVNELNSVIANVLRSCELSEAE 711
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 113/269 (42%), Gaps = 37/269 (13%)
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL-SVFANKGQVDMMERWYEKF 312
++V+ Y + + D+ ++ + ++ P V + N +L + +K + E +++
Sbjct: 138 DLVVKSYSRLCLIDKALSIVH-LSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 313 RNFGIDPETRTFNILIGAYG-------KKRMYDKMS------SVMEY---------MRKL 350
+ P T+NILI + R +D+M +V+ Y +RK+
Sbjct: 197 LQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 351 Q--FPWTSS-----------TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
F S +YN VI G K + + +M+ G D T+ L
Sbjct: 257 DDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTL 316
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
I GY G FH+ + + ++ +V Y ++I + KA ++ +M+ +
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGL 376
Query: 458 RPDSETFSIMTEAYAKEGMNDKVYALEQE 486
P+ T++ + + ++++G ++ Y + +E
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLKE 405
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 1/181 (0%)
Query: 316 GIDPETRTFNILIGAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKH 374
G P ++N ++ A + KR +V + M + Q TYN +I F G+
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDV 223
Query: 375 MEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVIS 434
F++M +G + T+ LI+GY +R + + N+ YN VI+
Sbjct: 224 ALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVIN 283
Query: 435 ACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEA 494
+ + E+ V M ++ D T++ + + Y KEG + + E L+ L
Sbjct: 284 GLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSP 343
Query: 495 S 495
S
Sbjct: 344 S 344
>gi|326501502|dbj|BAK02540.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 155/348 (44%), Gaps = 2/348 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P+ Y LL K G + A V +EM E G+ P Y+ L+ AY R + A +
Sbjct: 301 KPRTRAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARI 360
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +M+ +P Y +S ++ D ++ + ++M V P+ N+++ +
Sbjct: 361 LLKEMEA-DGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTF 419
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
GK V + M +PDV T NT++ G+ D +++ R P
Sbjct: 420 GKYNCLGHAMDVFNRM-RGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESNCPPG 478
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T T+NI+I G++ + + ++M M++ TY +++ + G K E
Sbjct: 479 TTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIE 538
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
M A+G+K + L+N YA GL ++ V+ + + N++I+A +
Sbjct: 539 AMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDR 598
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
++E V + MKE RPD T++ + +A + DKV + +E +
Sbjct: 599 RVVEAFSVLQFMKENDFRPDVITYTTLMKALIRVEQFDKVPVIYEEMI 646
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 145/329 (44%), Gaps = 2/329 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E TY L+ ++G+ E AR + EM +G++P+ +++ +LA + +AF
Sbjct: 337 PDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAV 396
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L +M QPD + Y+ +I ++ M + P+ VT N ++ +
Sbjct: 397 LREMHA-SGVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHC 455
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G D + M ES C P T N ++++ + + +E + + G+ P
Sbjct: 456 KGGRHDCAMELFKEMRES-NCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNI 514
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+ L+ YG+ Y + +E M+ + + Y+ ++ A++ G A H +
Sbjct: 515 ITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKA 574
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M A+G++A T LIN + + S ++ + +V Y ++ A I+ +
Sbjct: 575 MRADGLEASTVVLNSLINAFGEDRRVVEAFSVLQFMKENDFRPDVITYTTLMKALIRVEQ 634
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEA 470
++ +Y+ M C PD + +++ A
Sbjct: 635 FDKVPVIYEEMITSGCAPDRKARAMLRSA 663
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 128/281 (45%), Gaps = 5/281 (1%)
Query: 210 NCQPDVYTYSTLIKACV---DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
N PD+ +YS L+ + + D ++E L D+ + + P+ + ++ + +A +
Sbjct: 190 NFLPDLASYSHLLASLLNTRDPPDAAILERLLGDLRDSRLEPDAPLFSDLISAFARAALP 249
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG-IDPETRTFN 325
D +L+ ++ P + ++S G+V E + +F G I P TR +N
Sbjct: 250 DAALELLASA-QAIGLTPRSNAVTALISALGIAGRVPEAEALFLEFFLAGEIKPRTRAYN 308
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
L+ Y K V++ M + +TY+ +++A++ G + ++M A+
Sbjct: 309 ALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARILLKEMEAD 368
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G+K + F ++ G+ + G + K + +R + + FYN +I K + L
Sbjct: 369 GVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHA 428
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
V+ RM+ + PD T++ + +A+ K G +D L +E
Sbjct: 429 MDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKE 469
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 166/407 (40%), Gaps = 54/407 (13%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
L + +AL +F + +P T+ L+ L + G+ A + + MVE G++P
Sbjct: 163 LDHRVSEALDLFHQI-----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQ 217
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
Y + C+ A L +M+ + + +P+V YS +I R L+
Sbjct: 218 ITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFI 277
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
+M ++ + PN VT N ++GG+ +G + +R+L MLE P+V T N +++ F +
Sbjct: 278 EMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKI-SPNVVTYNALINAFVKE 336
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAY---------------------------- 331
G+ Y++ GI P T T+N +I +
Sbjct: 337 GKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTF 396
Query: 332 --------GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
G KR+ D M + E R+ + TYN +I F +GD +QM
Sbjct: 397 TTLIDGYCGAKRIDDGMELLHEMPRR-GLVANTVTYNTLIHGFCLVGDLNAALDLSQQMI 455
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ-----------IAENVSFYNAV 432
+ G+ D T L++G + G + + K + + +V YN +
Sbjct: 456 SSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNIL 515
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
I I +E E +Y+ M + PD+ T+S M + K+ D+
Sbjct: 516 ICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 562
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 138/346 (39%), Gaps = 54/346 (15%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
+ +W A ++ + + E+ P TY L+ K G+ A ++++EM+ GI P
Sbjct: 300 ISGRWSAAQRLLQEMLERKI-SPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNT 358
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
Y +++ +C+ +D A M T C PDV+T++TLI A R + L
Sbjct: 359 ITYNSMIDGFCKQDRLDAAEDMFYLMAT-KGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC----------------- 282
+M R + NTVT N ++ G+ G + + M+ S C
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 477
Query: 283 ----------------------------KPDVWTMNTILSVFANKGQVDMMERWYEKFRN 314
+PDV T N ++ N+G+ E YE+ +
Sbjct: 478 KLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPH 537
Query: 315 FGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKH 374
GI P+T T++ +I K+ D+ + + M F T+N +I + G
Sbjct: 538 RGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDD 597
Query: 375 MEYTFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISS 413
F +M G+ AD + LI G+ G +F ++ISS
Sbjct: 598 GLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISS 643
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 118/311 (37%), Gaps = 40/311 (12%)
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
A F ++ + G+ P +T LL C + + EA +Q+ C+PDV T++TL
Sbjct: 134 FALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI-----CRPDVLTFTTL 188
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
+ R L M E + P+ +T + G K G +L M E +
Sbjct: 189 MNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISH 248
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
KP+V + I+ G+ + + ++ GI P T+N +IG + +
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQ 308
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+++ M + + TYN +I AF G +++M G+ +T T
Sbjct: 309 RLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTIT-------- 360
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
YN++I K D L E ++ M K C PD
Sbjct: 361 ---------------------------YNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDV 393
Query: 462 ETFSIMTEAYA 472
TF+ + + Y
Sbjct: 394 FTFTTLIDGYC 404
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 154/366 (42%), Gaps = 56/366 (15%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
A+ +F +ML+ +P P + KL+ + + +P+L ++ +M + I +T
Sbjct: 64 DAIDLFSDMLRSRPL--PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDE 243
L+ +C S + A T ++ L PDV T++TL+ C+D E ++ +Q
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKL-GLHPDVVTFTTLLHGLCLDHRVSEALDLFHQ---- 176
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
C+PDV T T+++ +G+V
Sbjct: 177 -------------------------------------ICRPDVLTFTTLMNGLCREGRVV 199
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ----FPWTSSTY 359
++ G+ P+ T+ + G +M D +S+ + +RK++ Y
Sbjct: 200 EAVALLDRMVENGLQPDQITYGTFVD--GMCKMGDTVSA-LNLLRKMEEISHIKPNVVIY 256
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+ +I+ G F +M +G+ + T+ C+I G+ +G + ++ +
Sbjct: 257 SAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLE 316
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+I+ NV YNA+I+A +K E +Y M + P++ T++ M + + K+ D+
Sbjct: 317 RKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ---DR 373
Query: 480 VYALEQ 485
+ A E
Sbjct: 374 LDAAED 379
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 15/222 (6%)
Query: 109 NTVAETFSDHVLKK---QWFQALQV--FEMLKEQPF--YQPKEGTYMKLLVLLGKSGQPE 161
NT+ + D+ K + F+A+Q ++ PF +P TY L+ L G+
Sbjct: 467 NTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFL 526
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA---FVTLNQMKTLPNCQPDVYTY 218
A +++ EM GI P Y++++ C+ S +DEA FV++ PN V T+
Sbjct: 527 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPN----VVTF 582
Query: 219 STLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
+TLI A R + L+ +M R + + + ++ G+ K G + + M+
Sbjct: 583 NTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMIS 642
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
S PD T+ +L+ F +K +++ E + + ++ E
Sbjct: 643 SGV-YPDTITIRNMLTGFWSKEELERAVAMLEDLQRYQLEDE 683
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 10/204 (4%)
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
KG D ++ + + R+ + P FN L+GA + D + S+ + M + Q +
Sbjct: 60 KGLEDAIDLFSDMLRSRPL-PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYS 118
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
+ +I+ F TF ++ G+ D TF L++G L H+V ++ L
Sbjct: 119 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLC---LDHRVSEALDLFH 175
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
++ + ++F + C + ++E + RM E +PD T+ + K M D
Sbjct: 176 QICRPDVLTFTTLMNGLC-REGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCK--MGD 232
Query: 479 KVYALEQEKLQMLLEASGHWQQNI 502
V AL L +E H + N+
Sbjct: 233 TVSAL---NLLRKMEEISHIKPNV 253
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 182/407 (44%), Gaps = 44/407 (10%)
Query: 120 LKKQWFQALQVFEMLKEQ--PFYQPKEGTYMKLLVLLGKS-GQPELARKVFNEMVEEGIE 176
LK Q +AL + L Q F Q GT + + +G + G +L RK+ + +
Sbjct: 141 LKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTK---- 196
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
P E+Y ++ A C+ L+ EA+ ++M T DV TY+TLI A + +
Sbjct: 197 PNVEMYNTIIDALCKYQLVSEAYGLFSEM-TAKGISADVVTYTTLIYGFCIASKLKEAIG 255
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
L +M +++ PN T NI++ K G + + VL+ ML+ A KPDV T +T++ +
Sbjct: 256 LLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLK-ACVKPDVITYSTLMDGY 314
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
++ + + G+ P+ ++ ILI + K +M D+ ++ + M +
Sbjct: 315 FLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGI 374
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-------LFHK 409
TY+++I+ G ++ ++M G+ A+ T+ LI+G G LF+K
Sbjct: 375 VTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNK 434
Query: 410 ---------------VISSVRLASKLQIAE-------------NVSFYNAVISACIKADD 441
++ + +L+ A+ +V YN +I+ K
Sbjct: 435 MKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGL 494
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
L E + +M+E C P++ TF I+ A K+ NDK L ++ +
Sbjct: 495 LEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMI 541
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/394 (20%), Positives = 145/394 (36%), Gaps = 43/394 (10%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP T L+ GQ V ++++ G +P +T L+ C +++A
Sbjct: 91 QPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALH 150
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+++ + D +Y TLI L + +D R PN N ++
Sbjct: 151 FHDKLLA-QGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDAL 209
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K + + + S M DV T T++ F ++ + I+P
Sbjct: 210 CKYQLVSEAYGLFSEMTAKGI-SADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPN 268
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+NIL+ A K+ + +V+ M K TY+ +++ + + + K ++ F
Sbjct: 269 VYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFN 328
Query: 381 QMHAEGMKADTKTFCCLINGYAN--------------------------AGLFHKVISSV 414
M G+ D ++ LING+ + L + S
Sbjct: 329 AMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSG 388
Query: 415 RLA---------SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
R++ I NV YN++I K L ++ +MK++ RP S TF+
Sbjct: 389 RISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFT 448
Query: 466 IMTEAYAKEG-MNDKVYALEQEKLQMLLEASGHW 498
I+ + K G + D QE Q LL H
Sbjct: 449 ILLDGLCKGGRLKD-----AQEAFQDLLTKGYHL 477
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 97/260 (37%), Gaps = 36/260 (13%)
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
TP + N +L + K + LS LE +PD+ T+N +++ F + GQ+
Sbjct: 56 TPPIIQFNKILDSFAKIKHYSTAVS-LSHRLELKGIQPDLITLNILINCFCHMGQITFGF 114
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKK-------RMYDKM------------------- 340
K G P T TF LI K +DK+
Sbjct: 115 SVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGV 174
Query: 341 ------SSVMEYMRKLQFPWTSST---YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
++ +RK+ T YN +I+A F +M A+G+ AD
Sbjct: 175 CKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADV 234
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
T+ LI G+ A + I + I NV YN ++ A K + E + V
Sbjct: 235 VTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAV 294
Query: 452 MKEKHCRPDSETFSIMTEAY 471
M + +PD T+S + + Y
Sbjct: 295 MLKACVKPDVITYSTLMDGY 314
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 166/407 (40%), Gaps = 54/407 (13%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
L + +AL +F + +P T+ L+ L + G+ A + + MVE G++P
Sbjct: 163 LDHRVSEALDLFHQI-----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQ 217
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
Y + C+ A L +M+ + + +P+V YS +I R L+
Sbjct: 218 ITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFI 277
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
+M ++ + PN VT N ++GG+ +G + +R+L MLE P+V T N +++ F +
Sbjct: 278 EMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKI-SPNVVTYNALINAFVKE 336
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAY---------------------------- 331
G+ Y++ GI P T T+N +I +
Sbjct: 337 GKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTF 396
Query: 332 --------GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
G KR+ D M + E R+ + TYN +I F +GD +QM
Sbjct: 397 TTLIDGYCGAKRIDDGMELLHEMPRR-GLVANTVTYNTLIHGFCLVGDLNAALDLSQQMI 455
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ-----------IAENVSFYNAV 432
+ G+ D T L++G + G + + K + + +V YN +
Sbjct: 456 SSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNIL 515
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
I I +E E +Y+ M + PD+ T+S M + K+ D+
Sbjct: 516 ICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 562
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 138/346 (39%), Gaps = 54/346 (15%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
+ +W A ++ + + E+ P TY L+ K G+ A ++++EM+ GI P
Sbjct: 300 ISGRWSAAQRLLQEMLERKI-SPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNT 358
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
Y +++ +C+ +D A M T C PDV+T++TLI A R + L
Sbjct: 359 ITYNSMIDGFCKQDRLDAAEDMFYLMAT-KGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC----------------- 282
+M R + NTVT N ++ G+ G + + M+ S C
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 477
Query: 283 ----------------------------KPDVWTMNTILSVFANKGQVDMMERWYEKFRN 314
+PDV T N ++ N+G+ E YE+ +
Sbjct: 478 KLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPH 537
Query: 315 FGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKH 374
GI P+T T++ +I K+ D+ + + M F T+N +I + G
Sbjct: 538 RGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDD 597
Query: 375 MEYTFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISS 413
F +M G+ AD + LI G+ G +F ++ISS
Sbjct: 598 GLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISS 643
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 118/311 (37%), Gaps = 40/311 (12%)
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
A F ++ + G+ P +T LL C + + EA +Q+ C+PDV T++TL
Sbjct: 134 FALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI-----CRPDVLTFTTL 188
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
+ R L M E + P+ +T + G K G +L M E +
Sbjct: 189 MNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISH 248
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
KP+V + I+ G+ + + ++ GI P T+N +IG + +
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQ 308
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+++ M + + TYN +I AF G +++M G+ +T T
Sbjct: 309 RLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTIT-------- 360
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
YN++I K D L E ++ M K C PD
Sbjct: 361 ---------------------------YNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDV 393
Query: 462 ETFSIMTEAYA 472
TF+ + + Y
Sbjct: 394 FTFTTLIDGYC 404
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 154/366 (42%), Gaps = 56/366 (15%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
A+ +F +ML+ +P P + KL+ + + +P+L ++ +M + I +T
Sbjct: 64 DAIDLFSDMLRSRPL--PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDE 243
L+ +C S + A T ++ L PDV T++TL+ C+D E ++ +Q
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKL-GLHPDVVTFTTLLHGLCLDHRVSEALDLFHQ---- 176
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
C+PDV T T+++ +G+V
Sbjct: 177 -------------------------------------ICRPDVLTFTTLMNGLCREGRVV 199
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ----FPWTSSTY 359
++ G+ P+ T+ + G +M D +S+ + +RK++ Y
Sbjct: 200 EAVALLDRMVENGLQPDQITYGTFVD--GMCKMGDTVSA-LNLLRKMEEISHIKPNVVIY 256
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+ +I+ G F +M +G+ + T+ C+I G+ +G + ++ +
Sbjct: 257 SAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLE 316
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+I+ NV YNA+I+A +K E +Y M + P++ T++ M + + K+ D+
Sbjct: 317 RKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ---DR 373
Query: 480 VYALEQ 485
+ A E
Sbjct: 374 LDAAED 379
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 95/205 (46%), Gaps = 15/205 (7%)
Query: 109 NTVAETFSDHVLKK---QWFQALQV--FEMLKEQPF--YQPKEGTYMKLLVLLGKSGQPE 161
NT+ + D+ K + F+A+Q ++ PF +P TY L+ L G+
Sbjct: 467 NTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFL 526
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA---FVTLNQMKTLPNCQPDVYTY 218
A +++ EM GI P Y++++ C+ S +DEA FV++ PN V T+
Sbjct: 527 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPN----VVTF 582
Query: 219 STLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
+TLI A R + L+ +M R + + + ++ G+ K G + + M+
Sbjct: 583 NTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMIS 642
Query: 279 SATCKPDVWTMNTILSVFANKGQVD 303
S PD T+ +L+ F +K +++
Sbjct: 643 SGV-YPDTITIRNMLTGFWSKEELE 666
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 10/204 (4%)
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
KG D ++ + + R+ + P FN L+GA + D + S+ + M + Q +
Sbjct: 60 KGLEDAIDLFSDMLRSRPL-PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYS 118
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
+ +I+ F TF ++ G+ D TF L++G L H+V ++ L
Sbjct: 119 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLC---LDHRVSEALDLFH 175
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
++ + ++F + C + ++E + RM E +PD T+ + K M D
Sbjct: 176 QICRPDVLTFTTLMNGLC-REGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCK--MGD 232
Query: 479 KVYALEQEKLQMLLEASGHWQQNI 502
V AL L +E H + N+
Sbjct: 233 TVSAL---NLLRKMEEISHIKPNV 253
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 161/366 (43%), Gaps = 13/366 (3%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG-IEPTPELYTAL 185
AL + ++E+ P + TY ++ K G+ + A KVF+EM+ +G ++P +Y AL
Sbjct: 538 ALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNAL 597
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ YC +D A + ++M V TY+ L+ A R L ++M +
Sbjct: 598 IGGYCDQGKLDTALLYRDRMVER-GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 656
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+ T NI++ G+ K G + + M + V T ++ + KGQV
Sbjct: 657 LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGV-RATVVTYTALIYALSKKGQVQET 715
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++ +++ GI P+ +N LI ++ D+ +M M K + TYN ++
Sbjct: 716 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 775
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---I 422
+G ++M G++ D T+ LI+GY+ G V ++R+ +++
Sbjct: 776 LCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKG---DVKDALRIRNEMMNKGF 832
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
+ YNA+I K + E + K M E PD T+ + E E A
Sbjct: 833 NPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDER----A 888
Query: 483 LEQEKL 488
++ E+L
Sbjct: 889 IDDERL 894
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 137/331 (41%), Gaps = 6/331 (1%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
T+ +L L +G+P A ++ +M P Y ++A +C + A + +M
Sbjct: 490 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 545
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS-VTPNTVTQNIVLGGYGKAG 264
+ P+ YTY T+I R + ++ +M + V P V N ++GGY G
Sbjct: 546 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 605
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
D M+E V T N ++ G+ E+ G+ P+ T+
Sbjct: 606 KLDTALLYRDRMVERGVAM-TVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 664
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
NILI + K+ K + E M + T TY +I A S G + + F++
Sbjct: 665 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 724
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
G++ D + LIN ++ +G + + K +IA + YN ++ + E
Sbjct: 725 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 784
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++ M E+ +PD T++ + Y+ +G
Sbjct: 785 ARKLIDEMTERGIQPDLVTYNTLISGYSMKG 815
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 104/240 (43%), Gaps = 1/240 (0%)
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMER 307
PN VT N V+ G+ G ++ M E P+ +T T++S + G+VD +
Sbjct: 517 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 576
Query: 308 WYEKFRNFG-IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+++ G + PE +N LIG Y + D + M + T +TYN ++ A
Sbjct: 577 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 636
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G E+M +G+ D T+ LING+ G K + S+ + V
Sbjct: 637 FMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 696
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
Y A+I A K + E ++++ + RPD ++ + +++ G D+ + + E
Sbjct: 697 VTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 756
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 124/306 (40%), Gaps = 6/306 (1%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+ +L C A L QM +P+ TY+T+I R + + ++M
Sbjct: 491 FNIMLRHLCSAGKPARALELLRQMP-----RPNAVTYNTVIAGFCSRGRVQAALDIMREM 545
Query: 242 DERS-VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
ER + PN T V+ G+ K G D+ +V ML KP+ N ++ + ++G
Sbjct: 546 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 605
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
++D + ++ G+ T+N+L+ A + ++E M TYN
Sbjct: 606 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 665
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+I G+ K FE M G++A T+ LI + G + A +
Sbjct: 666 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 725
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
I ++ YNA+I++ + ++ + M++K PD T++ + G D+
Sbjct: 726 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 785
Query: 481 YALEQE 486
L E
Sbjct: 786 RKLIDE 791
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 112/274 (40%), Gaps = 4/274 (1%)
Query: 145 GTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQ 204
TY L+ L G+ A ++ EM +G+ P Y L+ +C+ + +A
Sbjct: 627 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 686
Query: 205 MKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG 264
M + V TY+ LI A + + + L+ + R + P+ V N ++ + +G
Sbjct: 687 MSRR-GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSG 745
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
D+ ++ G +E PD T NT++ G+VD + ++ GI P+ T+
Sbjct: 746 NIDRAFEIM-GEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTY 804
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
N LI Y K + M F T TYN +I+ G E ++M
Sbjct: 805 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 864
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
G+ D T+ LI G + I RLA+
Sbjct: 865 NGITPDDSTYISLIEGLTTED--ERAIDDERLAA 896
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 167/424 (39%), Gaps = 44/424 (10%)
Query: 108 VNTVAETFSDHVLKKQWF------QALQVFEMLKEQ-PFYQPKEGTYMKLLVLLGKSGQP 160
+ V + FS +L K QA + M+ E P Y ++ K G
Sbjct: 180 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDV 239
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
A +F EMV+ GI P Y++++ A C+ + +A L QM PD +TY+
Sbjct: 240 NKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVN-KGVLPDNWTYNN 298
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
LI +++ ++++M S+ P+ VT N+++G K G + V M
Sbjct: 299 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKG 358
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
PDV++ +L+ +A KG + M ++ GI P+ TF++LI AY M DK
Sbjct: 359 Q-NPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKA 417
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+ MR TY VI A +G F QM +G+ D + CLI G
Sbjct: 418 MIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQG 477
Query: 401 YANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME-------------- 446
+ G K + + ++ F++++I+ K +M+ +
Sbjct: 478 FCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPD 537
Query: 447 ---------------------RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
RV+ M P+ + + Y K G D+ +L +
Sbjct: 538 AVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFR 597
Query: 486 EKLQ 489
E LQ
Sbjct: 598 EMLQ 601
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 157/381 (41%), Gaps = 58/381 (15%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ ++ +PELA F +++ G+ + LL +C DEA
Sbjct: 113 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 172
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACV---------DAMRF----------------ELIET 236
L C PDV++YS L+K+ D +R +I+
Sbjct: 173 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDC 232
Query: 237 ------------LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
L+++M +R + P+ VT + V+ KA + E L M+ P
Sbjct: 233 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVL-P 291
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA---YGK----KRMY 337
D WT N ++ +++ GQ R +++ R I P+ T N+L+G+ YGK + ++
Sbjct: 292 DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVF 351
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
D M+ K Q P S Y ++ ++ G M F+ M +G+ D TF L
Sbjct: 352 DTMA------MKGQNPDVFS-YKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVL 404
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI---KADDLMEMERVYKRMKE 454
I YAN G+ K + + +V Y VI+A K DD ME + +M +
Sbjct: 405 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEK---FNQMID 461
Query: 455 KHCRPDSETFSIMTEAYAKEG 475
+ PD + + + + G
Sbjct: 462 QGVAPDKYAYHCLIQGFCTHG 482
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 153/366 (41%), Gaps = 7/366 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
QW +A++VF+ ++ P T L+ L K G+ + AR VF+ M +G P Y
Sbjct: 308 QWKEAVRVFKEMRRHSIL-PDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 366
Query: 183 TALLAAYC-RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+L Y + L+D L + PD+YT+S LIKA + + ++ +M
Sbjct: 367 KIMLNGYATKGCLVD--MTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEM 424
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ V P+ VT V+ + G D + M++ PD + + ++ F G
Sbjct: 425 RDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGV-APDKYAYHCLIQGFCTHGS 483
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+ + + N G+ + F+ +I K R+ D + + Q P + Y+
Sbjct: 484 LLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHP-DAVVYS 542
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+++ + +G + F+ M + G++ + + L+NGY G + +S R +
Sbjct: 543 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQK 602
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
I + YN +I A + + + M E + T++I+ + K D+
Sbjct: 603 GIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEA 662
Query: 481 YALEQE 486
L +E
Sbjct: 663 IFLFKE 668
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 120/295 (40%), Gaps = 4/295 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ G + A +FNEM + G++P YT ++AA CR +D+A
Sbjct: 396 PDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEK 455
Query: 202 LNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
NQM PD Y Y LI+ C + E + + M+ + + V + ++
Sbjct: 456 FNQMID-QGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNN-GMRLDIVFFSSIINNL 513
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + + + PD + ++ + G+++ R ++ + GI+P
Sbjct: 514 CKLGRIMDAQNIFDLTVNVGQ-HPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 572
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+ L+ Y K D+ S+ M + ++ YN +I+ G + F
Sbjct: 573 VVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFH 632
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
+M G+ + T+ ++ G+ F + I + + + ++ N +I+
Sbjct: 633 EMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAG 687
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 2/166 (1%)
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
G+ E A +VF+ MV GIEP +Y L+ YC+ IDE +M +P
Sbjct: 552 GKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQ-KGIKPSTIL 610
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y+ +I A R + + +M E + N T NIVL G+ K FD+ L L
Sbjct: 611 YNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDE-AIFLFKEL 669
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
+ K D+ T+NT+++ +V+ + + G+ P T
Sbjct: 670 RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 171/380 (45%), Gaps = 23/380 (6%)
Query: 129 QVFEMLKEQPF--YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+ +E+L+E + + P E TY LL K G A + EMV G+ P+ YTAL+
Sbjct: 98 EAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALI 157
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+ C+ ++ A +QM+ + +P+ TY+TLI + +M E
Sbjct: 158 NSMCKARNLNRAMEFFDQMR-IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGF 216
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
+P+ VT N + G+ ++ V+ M+E PDV + +TI+S F KG++D
Sbjct: 217 SPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLA-PDVVSYSTIISGFCRKGELDRAF 275
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ ++ G+ P+ T++ LI + R + + + M + P TY +I A+
Sbjct: 276 QMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAY 335
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVI------SS 413
GD + ++M +G D T+ LING L K+I S
Sbjct: 336 CVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSD 395
Query: 414 VRLASKLQIAENVSFYNAVI---SACIKADDLM-EMERVYKRMKEKHCRPDSETFSIMTE 469
V + ++ N+ F + V C+K LM E +RV++ M E++ +P ++++
Sbjct: 396 VTYDTLIENCSNIEFKSVVALIKGFCMKG--LMHEADRVFESMVERNHKPGEAVYNVIIH 453
Query: 470 AYAKEGMNDKVYALEQEKLQ 489
+ + G K + L +E +
Sbjct: 454 GHCRGGNLPKAFNLYKEMIH 473
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 152/349 (43%), Gaps = 4/349 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ G+ + F EM G P Y L+ AYC+ IDEAF
Sbjct: 8 PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67
Query: 202 LNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L M + QP++ +Y+ +I C + E E L ++M + TP+ VT N +L GY
Sbjct: 68 LKSMSS-KGMQPNLISYNVIINGLCREGSMKEAWEIL-EEMGYKGFTPDEVTYNTLLNGY 125
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G F Q + + M+ + P V T +++ ++ ++++ R G+ P
Sbjct: 126 CKEGNFHQALVIHAEMVRNGV-SPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPN 184
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
RT+ LI + ++ + ++ ++ M + F + TYN I + + +
Sbjct: 185 ERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQ 244
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M +G+ D ++ +I+G+ G + + + ++ + Y+++I +
Sbjct: 245 EMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMR 304
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
L E + + M + PD T++ + AY EG +K L E +
Sbjct: 305 RLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIH 353
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 131/323 (40%), Gaps = 2/323 (0%)
Query: 170 MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM 229
M+ + P Y L+ +C + + +M+ C P+V TY+TLI A
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMER-NGCLPNVVTYNTLIDAYCKMG 59
Query: 230 RFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM 289
R + L + M + + PN ++ N+++ G + G + +L M PD T
Sbjct: 60 RIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGF-TPDEVTY 118
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
NT+L+ + +G + + G+ P T+ LI + K R ++ + MR
Sbjct: 119 NTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRI 178
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
TY +I+ FS G +M G T+ I+G+ +
Sbjct: 179 RGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEE 238
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+ V+ + +A +V Y+ +IS + +L ++ + M EK PD+ T+S + +
Sbjct: 239 ALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQ 298
Query: 470 AYAKEGMNDKVYALEQEKLQMLL 492
+ + L QE L M L
Sbjct: 299 GLCEMRRLTEACDLSQEMLDMGL 321
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 75/189 (39%), Gaps = 18/189 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E TY L+ G A + +EM+ +G P Y+ L+ + + EA
Sbjct: 323 PDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRL 382
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL----------------YQDMDERS 245
L ++ + DV TY TLI+ C + + F+ + L ++ M ER+
Sbjct: 383 LFKLIYEESVPSDV-TYDTLIENCSN-IEFKSVVALIKGFCMKGLMHEADRVFESMVERN 440
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P N+++ G+ + G + + M+ S V + I ++F +M
Sbjct: 441 HKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMS 500
Query: 306 ERWYEKFRN 314
E + R+
Sbjct: 501 EVIGDTLRS 509
>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 146/361 (40%), Gaps = 39/361 (10%)
Query: 126 QALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
A+++FE L+ Q K T+ L+ L G+ E A ++ M G P Y
Sbjct: 189 DAMKLFEEHLRFQSCNDTK--TFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNT 246
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ +C+++ + +A + +K+ C PDV TY+++I A + + L DM
Sbjct: 247 LIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRL 306
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ P VT N+++ GY KAG E + M+ S C PDV T +++ + GQV+
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMI-SFGCFPDVVTFTSLIDGYCRVGQVNQ 365
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
R +E+ G+ P T++ILI A K+ K ++ + YN VI+
Sbjct: 366 GFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVID 425
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
F G E+M + K D TF LI G+ G + +S
Sbjct: 426 GFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVS------------ 473
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
++ +M C PD T S + K GM + Y L
Sbjct: 474 -----------------------IFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLN 510
Query: 485 Q 485
Q
Sbjct: 511 Q 511
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 153/367 (41%), Gaps = 42/367 (11%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY-------CRNSLIDEA 198
TY L L K+G +LA ++F M +GI P L L++++ C +L+ ++
Sbjct: 105 TYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALLLQS 164
Query: 199 FVT----------LNQMKTLPNCQP---------------DVYTYSTLIKACVDAMRFEL 233
+ LN + L + D T++ LI+ + E
Sbjct: 165 YEVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKAEK 224
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
L M P+ VT N ++ G+ K+ + + + S+ C PDV T +++
Sbjct: 225 AVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMI 284
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL--- 350
S + G++ + GI P TFN+L+ Y K +M + E K+
Sbjct: 285 SGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKA---GEMHTAEEIRGKMISF 341
Query: 351 -QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
FP T+ ++I+ + +G +E+M+A GM + T+ LIN K
Sbjct: 342 GCFP-DVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLK 400
Query: 410 VISSV-RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ +LASK I YN VI KA + E + + M++K C+PD TF+I+
Sbjct: 401 ARELLGQLASK-DIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILI 459
Query: 469 EAYAKEG 475
+ +G
Sbjct: 460 IGHCMKG 466
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 126/281 (44%), Gaps = 10/281 (3%)
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
N + +TY+ L ++ A +L +++ M ++PN+ ++ + + G ++
Sbjct: 98 NIRHSFWTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKG---KL 154
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+ +L+S + +N++L+ +V+ + +E+ F +T+TFNILI
Sbjct: 155 HCATALLLQSYEVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIR 214
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE-GMK 388
+K ++ M TYN +I+ F + K F+ + + G
Sbjct: 215 GLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCS 274
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA---ENVSFYNAVISACIKADDLMEM 445
D T+ +I+GY AG + +SV L L++ NV+F N ++ KA ++
Sbjct: 275 PDVVTYTSMISGYCKAGKMQE--ASVLLDDMLRLGIYPTNVTF-NVLVDGYAKAGEMHTA 331
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
E + +M C PD TF+ + + Y + G ++ + L +E
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEE 372
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 115/266 (43%), Gaps = 5/266 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A ++F+ +K P TY ++ K+G+ + A + ++M+ GI PT + L
Sbjct: 259 KANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVL 318
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ Y + + A +M + C PDV T+++LI + L+++M+ R
Sbjct: 319 VDGYAKAGEMHTAEEIRGKMISF-GCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARG 377
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ PN T +I++ K + R L G L S P + N ++ F G+V+
Sbjct: 378 MFPNAFTYSILINALCKENRLLK-ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEA 436
Query: 306 ERWYEKFRNFGIDPETRTFNIL-IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
E+ P+ TF IL IG K RM++ + S+ M + T ++++
Sbjct: 437 IVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAV-SIFHKMVAIGCSPDKITVSSLLS 495
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKAD 390
G AK Y Q+ +G D
Sbjct: 496 CLLKAGMAKE-AYHLNQIAHKGQIND 520
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 84/205 (40%), Gaps = 3/205 (1%)
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
WT N + G D+ + +E ++ GI P +R L+ ++ +K ++++
Sbjct: 104 WTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALL-- 161
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
++ + N+++ + + FE+ DTKTF LI G G
Sbjct: 162 LQSYEVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGK 221
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH-CRPDSETFS 465
K + + S ++ YN +I K+++L + ++ +K C PD T++
Sbjct: 222 AEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYT 281
Query: 466 IMTEAYAKEGMNDKVYALEQEKLQM 490
M Y K G + L + L++
Sbjct: 282 SMISGYCKAGKMQEASVLLDDMLRL 306
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 156/350 (44%), Gaps = 5/350 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P E TY ++ K+G + A K+ + + +G P Y++L+ C + ++ A
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ + + Y+TL+K L +DM E +P+ T N+V+ G
Sbjct: 378 VFYEAME-KGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGL 436
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G +L+ + C PD++T NT++ + + +D + + GI P+
Sbjct: 437 CKMGCLSDANGILNDAIAKG-CIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPD 495
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS-DMGDAKHMEYTF 379
T+N L+ K R D + + M + TYN +IE+F D ++ ME F
Sbjct: 496 VITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAME-LF 554
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISS-VRLASKLQIAENVSFYNAVISACIK 438
++M G+ D T C LI G + G K V + + + + + + +N +I+A
Sbjct: 555 KEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCX 614
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
++ E+++ +M C PD+ T+ +M ++Y K G D + E +
Sbjct: 615 KLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENI 664
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 156/353 (44%), Gaps = 9/353 (2%)
Query: 125 FQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
+A +F EMLK+ P T+ KL+ +L K G + + K+F+++++ G+ P +
Sbjct: 198 IEAYHLFDEMLKQG--ICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFN 255
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
+ CR IDEA L + + PDV +Y+TLI + E M
Sbjct: 256 IFIQGLCRKGAIDEAARLLESIVS-EGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVN 314
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVL-SGMLESATCKPDVWTMNTILSVFANKGQV 302
V PN T N ++ G+ KAGM +++L M + PD +T +++++ N G +
Sbjct: 315 SGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFI--PDEFTYSSLINGLCNDGDM 372
Query: 303 D-MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ M +YE G +N L+ K+ + + +M+ M + TYN
Sbjct: 373 NRAMAVFYEAMEK-GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNL 431
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
V+ MG A+G D TF LI+GY K I +
Sbjct: 432 VVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG 491
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
I +V YN +++ KA L + +K M EK C P+ T++I+ E++ K+
Sbjct: 492 ITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKD 544
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 168/396 (42%), Gaps = 9/396 (2%)
Query: 83 GYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFY-- 140
G K ++++ ++ + +K D+ K + +A+ VFE + FY
Sbjct: 51 GLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERM---DFYDC 107
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P +Y ++ +L + G A KV+ M + GI P +T + ++C A
Sbjct: 108 EPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALR 167
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACV-DAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
LN M C+ + +Y +I + + E L+ +M ++ + P+ +T N ++
Sbjct: 168 LLNNMPG-QGCEFNAVSYCAVISGFYKENCQIEAYH-LFDEMLKQGICPDILTFNKLIHV 225
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K G + E++ S +++ C P+++T N + KG +D R E + G+ P
Sbjct: 226 LCKKGNVQESEKLFSKVMKRGVC-PNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTP 284
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ ++N LI + K + + M TYN +I F G ++ +
Sbjct: 285 DVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKIL 344
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
+G D T+ LING N G ++ ++ A + ++ YN ++ K
Sbjct: 345 RDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQ 404
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+++ ++ K M E C PD T++++ K G
Sbjct: 405 GLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMG 440
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 139/346 (40%), Gaps = 37/346 (10%)
Query: 144 EGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLN 203
EG Y+ ++ G+ G+ + A VF M EP+ + Y A++ +A
Sbjct: 76 EGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYM 135
Query: 204 QMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKA 263
+MK + PDVYT++ +K+ R L +M + N V+ V+ G+ K
Sbjct: 136 RMKDI-GIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKE 194
Query: 264 GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
+ + ML+ C PD+ T N ++ V KG V E+ + K G+ P T
Sbjct: 195 NCQIEAYHLFDEMLKQGIC-PDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFT 253
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
FNI I +K D+ + ++E + +YN +I F H
Sbjct: 254 FNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCK--------------H 299
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
++ ++A+ C ++ N+G + N YN +I+ KA +
Sbjct: 300 SKLVEAE-----CYLHKMVNSG----------------VEPNEFTYNTIINGFCKAGMMQ 338
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+++ + K PD T+S + +G ++ A+ E ++
Sbjct: 339 NADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAME 384
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 77/183 (42%), Gaps = 3/183 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY LL L K+ + + F M+E+G P Y L+ ++C++ + EA
Sbjct: 494 PDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMEL 553
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD-ERSVTPNTVTQNIVLGGY 260
+MKT PD+ T TLI + L+ ++ E + +T NI++ +
Sbjct: 554 FKEMKT-RGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAF 612
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
E++ M + C PD +T ++ + G +D+ + + + G+ P
Sbjct: 613 CXKLNVSMAEKLFHKM-GGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPS 671
Query: 321 TRT 323
T
Sbjct: 672 FTT 674
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 171/388 (44%), Gaps = 24/388 (6%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
NTV F + + AL + ++E+ P + TY ++ K G+ + A KVF+
Sbjct: 518 NTVIAGFCS---RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFD 574
Query: 169 EMVEEG-IEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC-V 226
EM+ +G ++P +Y AL+ YC +D A + ++M V TY+ L+ A +
Sbjct: 575 EMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVER-GVAMTVATYNLLVHALFM 633
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
D E E L ++M + + P+ T NI++ G+ K G + + M + V
Sbjct: 634 DGRGTEAYE-LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGV-RATV 691
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
T ++ + KGQV ++ +++ GI P+ +N LI ++ D+ +M
Sbjct: 692 VTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 751
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M K + TYN ++ +G ++M G++ D T+ LI+GY+ G
Sbjct: 752 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKG- 810
Query: 407 FHKVISSVRLASKLQIAENVSF------YNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
V ++R+ +++ N F YNA+I K + E + K M E PD
Sbjct: 811 --DVKDALRIRNEMM---NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPD 865
Query: 461 SETFSIMTEAYAKEGMNDKVYALEQEKL 488
T+ + E E A++ E+L
Sbjct: 866 DSTYISLIEGLTTEDER----AIDDERL 889
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 137/331 (41%), Gaps = 6/331 (1%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
T+ +L L +G+P A ++ +M P Y ++A +C + A + +M
Sbjct: 485 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 540
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS-VTPNTVTQNIVLGGYGKAG 264
+ P+ YTY T+I R + ++ +M + V P V N ++GGY G
Sbjct: 541 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 600
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
D M+E V T N ++ G+ E+ G+ P+ T+
Sbjct: 601 KLDTALLYRDRMVERGVAM-TVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 659
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
NILI + K+ K + E M + T TY +I A S G + + F++
Sbjct: 660 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 719
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
G++ D + LIN ++ +G + + K +IA + YN ++ + E
Sbjct: 720 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 779
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++ M E+ +PD T++ + Y+ +G
Sbjct: 780 ARKLIDEMTERGIQPDLVTYNTLISGYSMKG 810
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 104/240 (43%), Gaps = 1/240 (0%)
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMER 307
PN VT N V+ G+ G ++ M E P+ +T T++S + G+VD +
Sbjct: 512 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 571
Query: 308 WYEKFRNFG-IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+++ G + PE +N LIG Y + D + M + T +TYN ++ A
Sbjct: 572 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 631
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G E+M +G+ D T+ LING+ G K + S+ + V
Sbjct: 632 FMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 691
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
Y A+I A K + E ++++ + RPD ++ + +++ G D+ + + E
Sbjct: 692 VTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 751
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 124/306 (40%), Gaps = 6/306 (1%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+ +L C A L QM +P+ TY+T+I R + + ++M
Sbjct: 486 FNIMLRHLCSAGKPARALELLRQMP-----RPNAVTYNTVIAGFCSRGRVQAALDIMREM 540
Query: 242 DERS-VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
ER + PN T V+ G+ K G D+ +V ML KP+ N ++ + ++G
Sbjct: 541 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 600
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
++D + ++ G+ T+N+L+ A + ++E M TYN
Sbjct: 601 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 660
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+I G+ K FE M G++A T+ LI + G + A +
Sbjct: 661 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 720
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
I ++ YNA+I++ + ++ + M++K PD T++ + G D+
Sbjct: 721 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 780
Query: 481 YALEQE 486
L E
Sbjct: 781 RKLIDE 786
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 112/273 (41%), Gaps = 4/273 (1%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ L G+ A ++ EM +G+ P Y L+ +C+ + +A M
Sbjct: 623 TYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENM 682
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ V TY+ LI A + + + L+ + R + P+ V N ++ + +G
Sbjct: 683 SRR-GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 741
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D+ ++ G +E PD T NT++ G+VD + ++ GI P+ T+N
Sbjct: 742 IDRAFEIM-GEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYN 800
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
LI Y K + M F T TYN +I+ G E ++M
Sbjct: 801 TLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVEN 860
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
G+ D T+ LI G + I RLA+
Sbjct: 861 GITPDDSTYISLIEGLTTED--ERAIDDERLAA 891
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 166/380 (43%), Gaps = 10/380 (2%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
NT+ + L ++ FQ L F +P TY +L L K G+ + A+ V
Sbjct: 296 NTLINAYCREGLVEEAFQLLNSFS----SRGMEPGLLTYNAILYGLCKIGKYDRAKDVLI 351
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
EM++ G+ P Y LL CR I EA ++M PD+ ++S+LI V A
Sbjct: 352 EMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSR-RGVLPDLVSFSSLIG--VLA 408
Query: 229 MRFELIETL--YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
L + L +++M+ + P+ V I++ G+ + G ++ ML C DV
Sbjct: 409 RNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARG-CFMDV 467
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
T NT L+ K + + + G+ P+ TF LI Y K DK ++ E
Sbjct: 468 VTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEA 527
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M + TYN +I+ F G+ + ++ M + + D ++ ++NG+ ++GL
Sbjct: 528 MVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGL 587
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ ++ + I N+ N +I ++ D+ + +M PDS +++
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNT 647
Query: 467 MTEAYAKEGMNDKVYALEQE 486
+ + Y KE +K + L E
Sbjct: 648 LIDGYLKEANLEKAFILINE 667
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 161/370 (43%), Gaps = 5/370 (1%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+ +A ++F+ + + P ++ L+ +L ++G A F EM GI P
Sbjct: 375 RDNILEAQEIFDEMSRRGVL-PDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNV 433
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
+YT L+ +CRN + +A ++M C DV TY+T + F + L+ +
Sbjct: 434 IYTILIDGFCRNGALSDALKMRDEMLA-RGCFMDVVTYNTFLNGLCKKKMFADADMLFNE 492
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M ER + P+ T ++ GY K G D+ + M+ + KPD T NT++ F G
Sbjct: 493 MVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRT-NLKPDKVTYNTLIDGFCKAG 551
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
++ + ++ I P+ ++ ++ + + + ++ + M + T N
Sbjct: 552 EMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCN 611
Query: 361 NVIEAFSDMGDA-KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+I+ + GD K EY +M + G+ D+ ++ LI+GY K + K
Sbjct: 612 TLIKGYCRSGDMPKAYEY-LSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEK 670
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ N+ YN +++ + E E+V ++M E PD T+S + + + +
Sbjct: 671 RGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKE 730
Query: 480 VYALEQEKLQ 489
+ E LQ
Sbjct: 731 AFRFHDEMLQ 740
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 146/365 (40%), Gaps = 41/365 (11%)
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
KLL L ++G +LA +++ E+V GIE ++ A C++ + L+ M+
Sbjct: 227 KLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG- 285
Query: 209 PNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFD 267
D+ TY+TLI A C + + E + L R + P +T N +L G K G +D
Sbjct: 286 KGVFADIVTYNTLINAYCREGLVEEAFQLL-NSFSSRGMEPGLLTYNAILYGLCKIGKYD 344
Query: 268 QMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
+ + VL ML+ P+ T NT+L + + + +++ G+ P+ +F+ L
Sbjct: 345 RAKDVLIEMLQLGL-TPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSL 403
Query: 328 IGAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG---DAKHM-------- 375
IG + +Y + E R P + Y +I+ F G DA M
Sbjct: 404 IGVLARNGHLYQALMHFREMERSGIVP-DNVIYTILIDGFCRNGALSDALKMRDEMLARG 462
Query: 376 ------------------------EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
+ F +M GM D TF LI GY G K +
Sbjct: 463 CFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKAL 522
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
+ + + + YN +I KA ++ + ++ M K PD ++ + +
Sbjct: 523 NLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGF 582
Query: 472 AKEGM 476
G+
Sbjct: 583 CSSGL 587
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 76/186 (40%)
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
N +L G VD+ Y + GI+ T NI++ A K R ++ + + M
Sbjct: 226 NKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG 285
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
TYN +I A+ G + + GM+ T+ ++ G G + +
Sbjct: 286 KGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDR 345
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+ +L + N + YN ++ + D+++E + ++ M + PD +FS +
Sbjct: 346 AKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIG 405
Query: 470 AYAKEG 475
A+ G
Sbjct: 406 VLARNG 411
>gi|414887034|tpg|DAA63048.1| TPA: crs2 associated factor1 [Zea mays]
Length = 617
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 157/348 (45%), Gaps = 19/348 (5%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG-IEPTPELYTALLAAYCRNSLIDEAFV 200
P+ L+ LG +G+ A +F E G I+P Y ALL Y R + + A
Sbjct: 261 PRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQ 320
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L++M PD TYS L+ A A R+E L ++M+ V P++ + +L G+
Sbjct: 321 VLDEMSQC-GVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGF 379
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
G + + VL M +++ +PD N ++ F + + K R GI+P+
Sbjct: 380 RDRGDWQKAFAVLREM-QASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPD 438
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+N LI A+ K +D+ + + E MR+ P ++TYN +I + + +E
Sbjct: 439 VVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLS 498
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M +G+ + T+ L++ Y +G + + I + + + + Y+A+++A
Sbjct: 499 EMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNA----- 553
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
++ RPD T++ + +A + DKV + +E +
Sbjct: 554 -----------YAQRGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMI 590
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/362 (18%), Positives = 141/362 (38%), Gaps = 40/362 (11%)
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQP---ELARKVFNEMVEEGIEPTPELYTA 184
L++ +L+E F P +Y LL L + P L ++ ++ E +EP L++
Sbjct: 175 LRLLSLLREHDFL-PDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSD 233
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L++A+ R +L D A L + +
Sbjct: 234 LISAFARAALPDAALELLASAQAI------------------------------------ 257
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+TP + ++ G AG + E + + KP N +L + +
Sbjct: 258 GLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKN 317
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
E+ ++ G+ P+ T+++L+ AY + ++ +++ M +S ++ ++
Sbjct: 318 AEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILA 377
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
F D GD + +M A G++ D + +I+ + + + + I
Sbjct: 378 GFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEP 437
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
+V +N +I A K +++ M+E +C P + T++IM ++ + V A+
Sbjct: 438 DVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAML 497
Query: 485 QE 486
E
Sbjct: 498 SE 499
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 18/139 (12%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
++ W + +KEQ P TY L+ + G+SG+ + A M +G++P+P
Sbjct: 487 QEHWEGVEAMLSEMKEQGLV-PNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPT 545
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
+Y AL+ AY + L +PDV TY+TL+KA + +F+ + +Y++
Sbjct: 546 MYHALVNAYAQRGL-----------------RPDVITYTTLMKALIRVEQFDKVPVIYEE 588
Query: 241 MDERSVTPNTVTQNIVLGG 259
M P+ + ++ G
Sbjct: 589 MITSGCAPDRKARAMLRSG 607
>gi|168047776|ref|XP_001776345.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672305|gb|EDQ58844.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 155/328 (47%), Gaps = 7/328 (2%)
Query: 166 VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC 225
++ +MV+ GI P+ ++ + A+C + EA + +M+ L N +V Y+ LI A
Sbjct: 161 LYQDMVQRGISPSVSVFGTFIKAFCDAGRLKEALLITTEMEKL-NVPFNVVIYNILIDAY 219
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG---MFDQMERVLSGMLESATC 282
+ E E L +M ER + PN T N ++ GY +A F E ++ M E++
Sbjct: 220 GRVGQLEEAEGLMTEMRERGIQPNVGTYNALITGYLEAKPKRQFVVAEGLIEEM-EASGL 278
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
PDV T +L + ++G + E+ + + + G+ P + ++ LI AY ++R +K +
Sbjct: 279 YPDVVTFTMLLGAYGHEGLTEQAEQVFNRMKARGVQPNSYSYTALINAYAERRCPEKAAR 338
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
E +RK T TY +++A+ GD + ++ ++ M EG A T+ +++ +
Sbjct: 339 AFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVEGCVATRVTYMTILDAFQ 398
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
G + + + ++ YN ++++ ++ ++ + MK PDS
Sbjct: 399 KQGRYKEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDILLEMKTAGFLPDSF 458
Query: 463 TFSIMTEAYAKEGMNDKVYALEQEKLQM 490
T+ + + + + D+ AL+ + M
Sbjct: 459 TYCTLIYGFLR--VRDQTKALKYHREMM 484
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 137/320 (42%), Gaps = 36/320 (11%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y L+ G+ GQ E A + EM E GI+P Y AL+ Y ++
Sbjct: 212 YNILIDAYGRVGQLEEAEGLMTEMRERGIQPNVGTYNALITGY---------------LE 256
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
P Q F + E L ++M+ + P+ VT ++LG YG G+
Sbjct: 257 AKPKRQ------------------FVVAEGLIEEMEASGLYPDVVTFTMLLGAYGHEGLT 298
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
+Q E+V + M ++ +P+ ++ +++ +A + + R +E R G++P T+
Sbjct: 299 EQAEQVFNRM-KARGVQPNSYSYTALINAYAERRCPEKAARAFEMIRKQGVNPTVETYTA 357
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
L+ AY + + + +V + M+ T TY +++AF G K E+ +G
Sbjct: 358 LLDAYRRAGDLEMVQAVWKSMKVEGCVATRVTYMTILDAFQKQGRYKEARDLIEEFKNQG 417
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSF-YNAVISACIKADDLMEM 445
K D + L+N Y G H S + L K SF Y +I ++ D +
Sbjct: 418 HKPDLMVYNMLLNSYMRGGR-HVKASDILLEMKTAGFLPDSFTYCTLIYGFLRVRDQTKA 476
Query: 446 ERVYKRMKEKHCRPDSETFS 465
+ ++ M + PD +T++
Sbjct: 477 LKYHREMMNRGQLPDPKTYA 496
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 118/261 (45%), Gaps = 7/261 (2%)
Query: 141 QPKEGTYMKLLV--LLGK-SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDE 197
QP GTY L+ L K Q +A + EM G+ P +T LL AY L ++
Sbjct: 241 QPNVGTYNALITGYLEAKPKRQFVVAEGLIEEMEASGLYPDVVTFTMLLGAYGHEGLTEQ 300
Query: 198 AFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVL 257
A N+MK QP+ Y+Y+ LI A + E ++ + ++ V P T +L
Sbjct: 301 AEQVFNRMKA-RGVQPNSYSYTALINAYAERRCPEKAARAFEMIRKQGVNPTVETYTALL 359
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
Y +AG + ++ V M + C T TIL F +G+ E+F+N G
Sbjct: 360 DAYRRAGDLEMVQAVWKSM-KVEGCVATRVTYMTILDAFQKQGRYKEARDLIEEFKNQGH 418
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD-AKHME 376
P+ +N+L+ +Y + + K S ++ M+ F S TY +I F + D K ++
Sbjct: 419 KPDLMVYNMLLNSYMRGGRHVKASDILLEMKTAGFLPDSFTYCTLIYGFLRVRDQTKALK 478
Query: 377 YTFEQMHAEGMKADTKTFCCL 397
Y E M+ G D KT+ L
Sbjct: 479 YHREMMN-RGQLPDPKTYAKL 498
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 82/230 (35%), Gaps = 44/230 (19%)
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
D RS T I+ G+ M DQ V GML V NT+++ N +
Sbjct: 69 DPRSFT-------ILFTFLGRMAMPDQ-ALVFFGMLPKDKQFHSVHVYNTLITCLTNCNR 120
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
D+ Y + + P++ TF++L+ +
Sbjct: 121 YDL--ELYHNLAFYEVFPDSVTFSVLMNS------------------------------- 147
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
A G K + ++ M G+ F I + +AG + + KL
Sbjct: 148 ---AVKGGGSLKEVWALYQDMVQRGISPSVSVFGTFIKAFCDAGRLKEALLITTEMEKLN 204
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
+ NV YN +I A + L E E + M+E+ +P+ T++ + Y
Sbjct: 205 VPFNVVIYNILIDAYGRVGQLEEAEGLMTEMRERGIQPNVGTYNALITGY 254
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 153/345 (44%), Gaps = 9/345 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEM-VEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
P T+ L+ L KSG+ E A ++F M P YT ++ C++ +D A
Sbjct: 98 PDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIE 157
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L+ M C P+V TYS L++ A R + TL Q+M R P+ + N +L G
Sbjct: 158 LLDLMNE-TGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGL 216
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K+ D+ ++ M+ S C P V T N+++ +F QVD R + G P+
Sbjct: 217 CKSRRLDEALELVQLMIRSG-CYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPD 275
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD--MGDAK-HMEY 377
+N +I + D ++++ M + TY+ +I+ DA +E
Sbjct: 276 VINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEA 335
Query: 378 T---FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVIS 434
E M G + T+ +I G A + ++ +R ++ ++S ++ VI
Sbjct: 336 ACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIG 395
Query: 435 ACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ K+ DL +++ M E+ C+P+ ++ + + +K G DK
Sbjct: 396 SLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDK 440
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 153/368 (41%), Gaps = 14/368 (3%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+++ +++ E P TY L+ L K+G+ + + EM G +P +Y L
Sbjct: 154 RAIELLDLMNETGCC-PNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTL 212
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L C++ +DEA L Q+ C P V TY++L++ + + + L Q M ER
Sbjct: 213 LNGLCKSRRLDEAL-ELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERG 271
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ + N V+ G + D + +L M+ +A C PDV T +TI+ +VD
Sbjct: 272 CPPDVINYNTVIAGLCRDARLDDAQALLKQMV-AARCVPDVITYSTIIDGLCKDWRVD-- 328
Query: 306 ERW--------YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
W E + G P T+ ++I + R + +++ M + S
Sbjct: 329 ADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLS 388
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
+++ VI + D F M K + + LI+G + G K + L
Sbjct: 389 SFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELM 448
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
+ V+ YN+V+ + E R+ + M K C PD ++ + +
Sbjct: 449 VE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCV 507
Query: 478 DKVYALEQ 485
++ Y L Q
Sbjct: 508 EEAYELFQ 515
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 150/348 (43%), Gaps = 13/348 (3%)
Query: 148 MKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKT 207
+ LLV G+ GQ A ++F E E P Y +L+ C+ +D+A+ L++M+
Sbjct: 5 LNLLVRAGQHGQ---AVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 208 --LPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+P P V ++ +IK A RF ++ + TP+ +T NI++ K+G
Sbjct: 59 RGIP---PGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGR 115
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
++ ++ M S+ C P+V T T+++ G++D + G P T++
Sbjct: 116 VEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYS 175
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
+L+ K DK ++++ M + F YN ++ + M
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRS 235
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G T+ L+ + + + +++ S+ +V YN VI+ + L +
Sbjct: 236 GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDA 295
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ--EKLQML 491
+ + K+M C PD T+S + + K+ D + LE E L+M+
Sbjct: 296 QALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMM 343
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 138/339 (40%), Gaps = 10/339 (2%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
++ +AL++ +++ Y P TY L+ L +S Q + A ++ M E G P
Sbjct: 220 RRLDEALELVQLMIRSGCY-PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVIN 278
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-C----VDA-MRFELIE 235
Y ++A CR++ +D+A L QM C PDV TYST+I C VDA + E
Sbjct: 279 YNTVIAGLCRDARLDDAQALLKQM-VAARCVPDVITYSTIIDGLCKDWRVDADWKLEAAC 337
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
+ + M + PN T +V+ G +A Q +L M++S PD+ + + ++
Sbjct: 338 EILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEV-VPDLSSFSMVIGS 396
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
+D + + P + LI K DK V E M + F
Sbjct: 397 LCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE-SFRPG 455
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
+TYN+V++ +G + E M + D ++ LI G + +
Sbjct: 456 VATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQ 515
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
A V YN +++ K L + V ++ E
Sbjct: 516 AVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIE 554
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 158/357 (44%), Gaps = 14/357 (3%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P + L+ L SG+ A K+FNEM+++G EP YTAL+ YC+ + +AF
Sbjct: 248 PDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFL 307
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
NQM + P+V TY+ L + + L +M + + N T N ++ G
Sbjct: 308 HNQMVQI-GLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLC 366
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
KAG Q +++ M E A PD T T++ + G++ + + G+ P
Sbjct: 367 KAGNILQAVKLMEEMKE-AGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTV 425
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
TFN+L+ + ++++M + ++TYN++++ + + + +
Sbjct: 426 VTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRG 485
Query: 382 MHAEGMKADTKTFCCLINGYANAG------LFHKVISSVRLASKLQIAENVSFYNAVISA 435
M A+G+ D+ T+ LI G+ A HK + R S YNA+I
Sbjct: 486 MCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNL------TASSYNALIKG 539
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLL 492
K L+E ++++ M+ + +E +++ + +EG + L E ++ L
Sbjct: 540 FFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEKCL 596
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 151/340 (44%), Gaps = 4/340 (1%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
L L K + KVF+E + G+ E Y L+ + R I EA L +M+
Sbjct: 81 LTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRME-FK 139
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
C PDV +Y+T+I + + L ++M + + PN T + ++ K+G +
Sbjct: 140 GCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEG 199
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI- 328
E+VL M++ PD T++ F G + + + I P++ F+ LI
Sbjct: 200 EKVLREMMKRGVF-PDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALIC 258
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
G G ++ + E ++K F TY +I+ + +G+ K + QM G+
Sbjct: 259 GLSGSGKVVEADKLFNEMIKK-GFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLT 317
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
+ T+ L +G +G + + + N+S YN +++ KA ++++ ++
Sbjct: 318 PNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKL 377
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
+ MKE PD+ T++ + +AY K G K L +E L
Sbjct: 378 MEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREML 417
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 162/364 (44%), Gaps = 6/364 (1%)
Query: 129 QVFEMLKEQPF--YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+V +++KE +P TY +++LL KSG+ KV EM++ G+ P +YT L+
Sbjct: 163 KVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLI 222
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+C+ A+ ++M+ PD +S LI + + + L+ +M ++
Sbjct: 223 DGFCKLGNTQAAYKLFSEMEA-REIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGF 281
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P+ VT ++ GY K G + + + M++ P+V T + G++D
Sbjct: 282 EPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGL-TPNVVTYTALADGLCKSGELDTAN 340
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ G+ T+N ++ K + +ME M++ + TY +++A+
Sbjct: 341 ELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAY 400
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G+ +M G++ TF L+NG +G ++ + I N
Sbjct: 401 YKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNA 460
Query: 427 SFYNAVISA-CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
+ YN+++ CI+ + + E +Y+ M + PDS T++I+ + + K + + L +
Sbjct: 461 ATYNSIMKQYCIRNNMRISTE-IYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHK 519
Query: 486 EKLQ 489
E ++
Sbjct: 520 EMVE 523
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 89/203 (43%), Gaps = 1/203 (0%)
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR-MYDKMSSV 343
D + V G ++ ++++K N+G+ + N+ + KR M + V
Sbjct: 38 DPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKV 97
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+L W + +YN ++ + +G + + +M +G D ++ +I+GY +
Sbjct: 98 FSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCH 157
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
G KV+ V+ + N+ Y+++I K+ ++E E+V + M ++ PD
Sbjct: 158 VGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVI 217
Query: 464 FSIMTEAYAKEGMNDKVYALEQE 486
++ + + + K G Y L E
Sbjct: 218 YTTLIDGFCKLGNTQAAYKLFSE 240
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 175/413 (42%), Gaps = 46/413 (11%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
+ + W + L++ + ++ + + E T ++ G+ G + ARK E+ G +P
Sbjct: 263 MGRSWDRILELLDEMRSKGL-ELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGT 321
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
Y ++L + + + EA L +M+ NC PD TY+ L V A + +
Sbjct: 322 VTYNSMLQVFGKAGIYTEALSILKEMED-NNCPPDSVTYNELAATYVRAGFLDEGMAVID 380
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
M + V PN +T V+ YGKAG D R+ S +++ C P+V+T N++L++ K
Sbjct: 381 TMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFS-LMKDLGCAPNVYTYNSVLAMLGKK 439
Query: 300 -----------------------------------GQVDMMERWYEKFRNFGIDPETRTF 324
G+ + + + + +N G +P+ TF
Sbjct: 440 SRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTF 499
Query: 325 NILIGAYGKKRMYDKMSSVMEY--MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
N LI AY R ++ S Y M K F +TYN ++ A + GD K E + M
Sbjct: 500 NTLISAYA--RCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDM 557
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
+G K + ++ L++ Y+ AG + + + + ++ K L
Sbjct: 558 RTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCRHL 617
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
MER + ++++ +PD + M +A+ +K+++ +E L + E
Sbjct: 618 RGMERAFDQLQKYGYKPDLVVINSMLSMFAR----NKMFSKAREMLHFIHECG 666
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 148/335 (44%), Gaps = 4/335 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR-NSLIDEAFV 200
P T+ +L + + G+ KV EM G EP + + L++AY R S +D A +
Sbjct: 459 PNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKM 518
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+K+ P V TY+ L+ A ++ E++ QDM + PN + +++L Y
Sbjct: 519 YGEMVKS--GFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCY 576
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
KAG +E+V + + P + T++ + MER +++ + +G P+
Sbjct: 577 SKAGNVKGIEKVEKEIYDGHVF-PSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPD 635
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
N ++ + + +M+ K ++ ++ + TYN +++ + G+ E +
Sbjct: 636 LVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLK 695
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+ G + D ++ +I G+ GL + I + + I + YN +S +
Sbjct: 696 GIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGME 755
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
E V + M E +CRP T+ I+ + Y K G
Sbjct: 756 LFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAG 790
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 163/407 (40%), Gaps = 72/407 (17%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y+P TY +L + GK+G A + EM + P Y L A Y R +DE
Sbjct: 317 YKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGM 376
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
++ M T P+ TY+T+I A A R + L+ M + PN T N VL
Sbjct: 377 AVIDTM-TSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAM 435
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
GK + + +VL M + C P+ T NT+L+V + +G+ + + + + +N G +P
Sbjct: 436 LGKKSRTEDVIKVLCEMKLNG-CAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEP 494
Query: 320 ETRTFNILIGAYGK-------KRMYDKM----------------------------SSVM 344
+ TFN LI AY + +MY +M SV+
Sbjct: 495 DKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVI 554
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKH------------------------------ 374
+ MR F ++Y+ ++ +S G+ K
Sbjct: 555 QDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKC 614
Query: 375 -----MEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFY 429
ME F+Q+ G K D +++ +A +F K + + + N+ Y
Sbjct: 615 RHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTY 674
Query: 430 NAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
N ++ ++ + + E V K ++ PD +++ + + + ++G+
Sbjct: 675 NCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGL 721
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 156/379 (41%), Gaps = 44/379 (11%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR-NSLIDEAFVTLNQM 205
Y +L ++G+ + A +F +M E G++PT Y +L Y + D L++M
Sbjct: 218 YTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEM 277
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
++ + D +T ST+I AC + ++ P TVT N +L +GKAG+
Sbjct: 278 RS-KGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGI 336
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+ + +L M E C PD T N + + + G +D + + G+ P T+
Sbjct: 337 YTEALSILKEM-EDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYT 395
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF------------------- 366
+I AYGK D + M+ L TYN+V+
Sbjct: 396 TVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLN 455
Query: 367 ----------------SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
S+ G ++ +M G + D TF LI+ YA G
Sbjct: 456 GCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCG---SE 512
Query: 411 ISSVRLASKL---QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ S ++ ++ V+ YNA+++A + D E V + M+ K +P+ ++S++
Sbjct: 513 VDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLL 572
Query: 468 TEAYAKEGMNDKVYALEQE 486
Y+K G + +E+E
Sbjct: 573 LHCYSKAGNVKGIEKVEKE 591
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 130/274 (47%), Gaps = 2/274 (0%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM-FDQMERV 272
DV Y+T++ + +++ L+ M E + P VT N++L YGK G +D++ +
Sbjct: 214 DVRAYTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILEL 273
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
L M S + D +T +T++S +G +D ++ + + G P T T+N ++ +G
Sbjct: 274 LDEM-RSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFG 332
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K +Y + S+++ M P S TYN + + G + M ++G+ +
Sbjct: 333 KAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAI 392
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
T+ +I+ Y AG + L L A NV YN+V++ K ++ +V M
Sbjct: 393 TYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEM 452
Query: 453 KEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
K C P+ T++ M ++EG ++ V + +E
Sbjct: 453 KLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLRE 486
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 109/253 (43%), Gaps = 9/253 (3%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+ W A V + ++ + F +P E +Y LL K+G + KV E+ + + P+
Sbjct: 544 RGDWKAAESVIQDMRTKGF-KPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWI 602
Query: 181 LYTALLAAY--CRN-SLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
L L+ CR+ ++ AF L + +PD+ ++++ F +
Sbjct: 603 LLRTLVLTNHKCRHLRGMERAFDQLQKY----GYKPDLVVINSMLSMFARNKMFSKAREM 658
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
+ E + PN T N ++ Y + G + E VL G+ S +PDV + NT++ F
Sbjct: 659 LHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGP-EPDVVSYNTVIKGFC 717
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
KG + + GI P T+N + Y ++D+ + V+ +M + +
Sbjct: 718 RKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSEL 777
Query: 358 TYNNVIEAFSDMG 370
TY +++ + G
Sbjct: 778 TYKILVDGYCKAG 790
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY L+ L + G+ A +V + G EP Y ++ +CR L+ EA
Sbjct: 668 QPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIG 727
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L++M T QP + TY+T + F+ + + M E + P+ +T I++ GY
Sbjct: 728 VLSEMTT-KGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGY 786
Query: 261 GKAGMFDQ 268
KAG +++
Sbjct: 787 CKAGKYEE 794
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 162/375 (43%), Gaps = 10/375 (2%)
Query: 98 LERKAKAKAWVNTVA-ETFSDHVLKKQWFQ-ALQVFEMLKEQPFYQPKEGTYMKLLVLLG 155
LER +A + V F D + K + A Q+ + + E+ P TY L+ L
Sbjct: 30 LERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCL-PTTVTYTALVDGLL 88
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPN-CQPD 214
K+G+ + A V +MVE+G PT + YT ++ + ++EA M L N C+PD
Sbjct: 89 KAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDM--LGNGCRPD 146
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDER----SVTPNTVTQNIVLGGYGKAGMFDQME 270
+ Y+ LIK + + E LY++ + R + P+ VT ++ G KAG +
Sbjct: 147 AFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEAR 206
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
+V PD T +I+ G+V+ + + RN G +P+ T+ LI
Sbjct: 207 QVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDG 266
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
+ K +M K V M + ++ TYN +++ G TF M G A
Sbjct: 267 FMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVAT 326
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
T+ L++G+ + G + R N+ YN +I +A L + ++
Sbjct: 327 VVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFE 386
Query: 451 RMKEKHCRPDSETFS 465
++ ++ PD TF+
Sbjct: 387 KLLQRRLCPDVYTFN 401
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 129/318 (40%), Gaps = 7/318 (2%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A V V G EP Y + C+ +D+AF L +M C P TY+ L+
Sbjct: 26 AFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDE-KKCLPTTVTYTALV 84
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
+ A R + + + M E+ +P T +V+ G KAG ++ R+ ML + C
Sbjct: 85 DGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNG-C 143
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYE----KFRNFGIDPETRTFNILIGAYGKK-RMY 337
+PD + ++ G+ + Y+ + + P+ T+ LI K R+
Sbjct: 144 RPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRIL 203
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
+ + + F + TY ++I+ +G + F +M G + D T+ L
Sbjct: 204 EARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAAL 263
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
I+G+ A + K R + + YN ++ KA + E + M+E+ C
Sbjct: 264 IDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGC 323
Query: 458 RPDSETFSIMTEAYAKEG 475
T+S + + + EG
Sbjct: 324 VATVVTYSALMDGFCSEG 341
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 149/365 (40%), Gaps = 10/365 (2%)
Query: 100 RKAKAKAWVNTVAET-FSDHVLKK-QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKS 157
RK A A + V T D + K + +A QVF+ + + P TY ++ L K
Sbjct: 176 RKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKL 235
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
G+ E + F+EM G EP Y AL+ + + +I +A QM V T
Sbjct: 236 GRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTV-T 294
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y+ ++ A R + M+ER VT + ++ G+ G + ML
Sbjct: 295 YNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRML 354
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
+ C+P++ + N I+ G++ ++EK + P+ TFN + +G +
Sbjct: 355 DRG-CEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFL--HGLCQRL 411
Query: 338 DKMSSVMEYMRKLQFPWTS---STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
D +S +E + TS +Y+ +++ G + F +M + G+ D F
Sbjct: 412 DTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVF 471
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
LI AG + + R + + S+++ ++ + + + E + MK
Sbjct: 472 NTLIRWLCIAGRVDEALEVFRELERRSAPDAWSYWS-LLDGLSRCERMEEARLLSFHMKL 530
Query: 455 KHCRP 459
+ C P
Sbjct: 531 QGCAP 535
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/205 (19%), Positives = 76/205 (37%), Gaps = 35/205 (17%)
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
C PD+ +++ + ++D E+ G +P+ T+N+ I K D
Sbjct: 3 CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+++ M + + T+ TY +++ G EQM +G KT+ +I+G
Sbjct: 63 QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
+ AG E R++ M CRPD+
Sbjct: 123 SKAGRVE-----------------------------------EARRIFVDMLGNGCRPDA 147
Query: 462 ETFSIMTEAYAKEGMNDKVYALEQE 486
++ + + K G ++ YAL +E
Sbjct: 148 FVYTALIKGLCKSGKPEEAYALYKE 172
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 45/100 (45%)
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
D F +ING + S + A + + YN I KA+ + + ++
Sbjct: 6 DMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLL 65
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
K+M EK C P + T++ + + K G D+ A+ ++ ++
Sbjct: 66 KKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVE 105
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 153/371 (41%), Gaps = 37/371 (9%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L G+ A V +M G P YT LL A C+ S +A
Sbjct: 163 EPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMK 222
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L++M C PD+ TY+ ++ R E +++ PNTV+ NIVL G
Sbjct: 223 LLDEMHD-KGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGL 281
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
A ++ E+++ M C P+V T N ++S +G V+ E+ +G P
Sbjct: 282 FTAERWEDAEKLMEEMAHKG-CPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPN 340
Query: 321 TRTFNILIGAYGK-KRMYDKMSSV-------------------------------MEYMR 348
+ ++N L+ A+ K K+++ M V +E +
Sbjct: 341 SLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLH 400
Query: 349 KLQFPWTSS---TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
+L+ S +YN VI+ + G K ++M ++G++ D T+ + +G
Sbjct: 401 QLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCRED 460
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ + + + I + YNA++ K + ++ M C P+ T++
Sbjct: 461 RIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYT 520
Query: 466 IMTEAYAKEGM 476
I+ E A EG+
Sbjct: 521 ILVEGLAYEGL 531
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 162/385 (42%), Gaps = 11/385 (2%)
Query: 103 KAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKE-QPFYQPKEGTYMKLLVLLGKSGQPE 161
+ KA + E V + + AL++ + L P G L+ L SG+
Sbjct: 62 RRKASSASATERLRVLVRRGELDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGRTA 121
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
AR+V + G P +Y A++A YC +D A + M +PD YTY+TL
Sbjct: 122 DARRV---LAASG--PDVMVYNAMVAGYCGAGQLDAARRLVADMPV----EPDAYTYNTL 172
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
I+ R + +DM R P+ VT I+L K + Q ++L M +
Sbjct: 173 IRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKG- 231
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
C PD+ T N +L+ +G+V+ + + ++G +P T ++NI++ ++
Sbjct: 232 CAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAE 291
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+ME M P T+N +I G + EQM G ++ ++ L++ +
Sbjct: 292 KLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAF 351
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
HK + V L ++ YN +++A + ++ + ++K+K C P
Sbjct: 352 CKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVL 411
Query: 462 ETFSIMTEAYAKEGMNDKVYALEQE 486
+++ + + K G + L E
Sbjct: 412 ISYNTVIDGLTKAGKTKEALELLDE 436
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 123/269 (45%), Gaps = 9/269 (3%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
++W A ++ E + + P T+ L+ L + G E A +V +M + G P
Sbjct: 285 ERWEDAEKLMEEMAHKGC-PPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLS 343
Query: 182 YTALLAAYCRNSLIDEA--FVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLY 238
Y LL A+C+ I +A FV L + C PD+ +Y+TL+ A C + IE L+
Sbjct: 344 YNPLLHAFCKQKKIHKAMEFVELMVSR---GCYPDIVSYNTLLTALCRNGEVDVAIELLH 400
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
Q + ++ +P ++ N V+ G KAG + +L M S +PD+ T +TI S
Sbjct: 401 Q-LKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEM-TSKGLQPDIITYSTIASGLCR 458
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
+ +++ R + K ++ GI P +N ++ K+R + YM ST
Sbjct: 459 EDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNEST 518
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
Y ++E + G K F Q+ + G+
Sbjct: 519 YTILVEGLAYEGLVKEARELFAQLCSRGV 547
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/430 (20%), Positives = 178/430 (41%), Gaps = 74/430 (17%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A ++ E L+E+ P ++ +L LGK + + A +F E++++ EP Y ++
Sbjct: 204 AYKLLERLRERGCI-PSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIII 261
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
C ++EA+ L++M+ + P++ T + ++ A + E +++ +R
Sbjct: 262 DMLCLGGRVEEAYRILDEMEH-ASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGC 320
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA-------------------------- 280
P+ VT ++ G GK G D+ R+ ML++
Sbjct: 321 NPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHK 380
Query: 281 --------TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
CKPD+ +NT + G+V+ +E R++G P+ R+++ILI
Sbjct: 381 VFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLT 440
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY--------------- 377
K + S++ M++ F + YN V++ F G H Y
Sbjct: 441 KAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKV-HKAYEILEEMKEKCVQPTV 499
Query: 378 ---------------------TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
FE+ ++G++ + + LI+G+ G + +
Sbjct: 500 ATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 559
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
K + NV +N+++ A +KA+++ E ++ MKE C P++ T+SI+ +
Sbjct: 560 MMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQK 619
Query: 477 NDKVYALEQE 486
+K + Q+
Sbjct: 620 YNKAFVFWQD 629
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 165/387 (42%), Gaps = 55/387 (14%)
Query: 112 AETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMV 171
A D VL A+ V LK ++P Y L+ L ++ +PE A ++ +M
Sbjct: 23 ARRLDDAVL------AVAVMRRLK----FRPAFSAYTVLIGALAEARRPERALELLRQMQ 72
Query: 172 EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNC-QPDVYTYSTLIKACVDAMR 230
E G E L+T L+ A R + +A ++++K +C +PD+ Y+ I A
Sbjct: 73 EVGYEVGVHLFTTLVRALAREGQVADALALVDEVKG--SCLEPDIVLYNVCIDCFGKAGN 130
Query: 231 FELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMN 290
++ + ++ + + P+ V+ ++ KAG + E + + M E+ P + N
Sbjct: 131 VDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQM-EAERSVPCAYAYN 189
Query: 291 TILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
T++ + + G+ + + E+ R G P +FN ++ GKKR D+ S+ E M+K
Sbjct: 190 TMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD 249
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
P SSTYN +I+ G + ++M +A LF +
Sbjct: 250 AEP-NSSTYNIIIDMLCLGGRVEEAYRILDEME-------------------HASLFPNL 289
Query: 411 ISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
++ N ++ KA L E ++++ ++ C PD T+ + +
Sbjct: 290 LT----------------VNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDG 333
Query: 471 YAKEGMNDKVYALEQEKLQMLLEASGH 497
K+G D+ Y L ++ L +GH
Sbjct: 334 LGKKGQVDEAYRLFEKMLD-----AGH 355
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 153/371 (41%), Gaps = 18/371 (4%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL++ ++E Y+ + L+ L + GQ A + +E+ +EP LY
Sbjct: 63 RALELLRQMQEVG-YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVC 121
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + + +D A +++K +PD +Y+++I A R E L+ M+
Sbjct: 122 IDCFGKAGNVDMACKFFHELKA-QGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAER 180
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P N ++ GYG AG F+ ++L + E C P V + N+IL+ K +VD
Sbjct: 181 SVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERG-CIPSVVSFNSILTCLGKKRKVDEA 239
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+E + +P + T+NI+I ++ +++ M T N +++
Sbjct: 240 LSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDR 298
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA-- 423
+ FE G D T+C LI+G G +V + RL K+ A
Sbjct: 299 LCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKG---QVDEAYRLFEKMLDAGH 355
Query: 424 -ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
N Y ++I + +V+K + + C+PD + + K G
Sbjct: 356 NANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAG------- 408
Query: 483 LEQEKLQMLLE 493
E EK +M+ E
Sbjct: 409 -EVEKGRMIFE 418
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 166/409 (40%), Gaps = 43/409 (10%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A ++FE Q P TY L+ LGK GQ + A ++F +M++ G P +YT+L
Sbjct: 307 EAYKIFES-ASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSL 365
Query: 186 LAAYCRNSLIDEAFVT------------LNQMKTLPNCQ--------------------- 212
+ + + ++ L + T +C
Sbjct: 366 IRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGF 425
Query: 213 -PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
PDV +YS LI A + ++ M ++ + N V+ G+ K+G +
Sbjct: 426 LPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYE 485
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+L M E +P V T I+ A ++D +E+ ++ GI+ ++ LI +
Sbjct: 486 ILEEMKEKCV-QPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGF 544
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
GK D+ ++E M K T+N++++A + F+ M +T
Sbjct: 545 GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNT 604
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
T+ LING ++K + K + NV Y +IS K ++ + +++R
Sbjct: 605 YTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFER 664
Query: 452 MKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE--QEKLQMLLEASGHW 498
K PD+ +F+ + EGM++ A+E Q + L +S W
Sbjct: 665 FKANGGIPDAASFNALI-----EGMSNANRAMEAYQTTVYQLSSSSCSW 708
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 123/304 (40%), Gaps = 42/304 (13%)
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L AA R +D+A + + M+ L +P Y+ LI A +A R E L + M E
Sbjct: 16 LAAALVRARRLDDAVLAVAVMRRL-KFRPAFSAYTVLIGALAEARRPERALELLRQMQEV 74
Query: 245 SVTPNTVTQNIVLGGYGKAG-MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
++ + G + D + L ++ + +PD+ N + F G VD
Sbjct: 75 GYEVGVHLFTTLVRALAREGQVADAL--ALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVD 132
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
M +++ + + G+ P+ ++ +I W V+
Sbjct: 133 MACKFFHELKAQGLKPDDVSYTSMI-------------------------W-------VL 160
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV-RLASKLQI 422
+G+A+ + F QM AE + +I GY +AG F + RL + I
Sbjct: 161 CKAGRLGEAEEL---FAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCI 217
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
VSF N++++ K + E +++ MK K P+S T++I+ + G ++ Y
Sbjct: 218 PSVVSF-NSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIIIDMLCLGGRVEEAYR 275
Query: 483 LEQE 486
+ E
Sbjct: 276 ILDE 279
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 147/332 (44%), Gaps = 2/332 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L++ K+G +LA ++F+ MV++G +P Y+AL+ C ++EA
Sbjct: 235 PDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDM 294
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L +M +P V+ Y+ I + DA R L M +R PN T ++ G
Sbjct: 295 LEEMID-KGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLS 353
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G F+ V ML P T + +++ +G+ + +E + P T
Sbjct: 354 RDGKFEVAIGVYHKMLADGLV-PTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNT 412
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+N++I + K +++ + M K TYN +I + G + E
Sbjct: 413 ETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEM 472
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G+K DT T+ LI+G++ G S + I+ NV YNA+I+ +
Sbjct: 473 MKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAK 532
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ + ++ +M E P S T+++M ++K
Sbjct: 533 VDDALALFWKMVESGNVPSSGTYNMMISGFSK 564
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 147/369 (39%), Gaps = 37/369 (10%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L G+ E A + EM+++GIEPT YT + + C EA
Sbjct: 270 PNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKL 329
Query: 202 LNQMKTLPNCQPDVYTYSTLI-----------------KACVDAM--------------- 229
L +MK C P+V TY+ LI K D +
Sbjct: 330 LGKMKK-RGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLY 388
Query: 230 ---RFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
RFE T+++ M PNT T N+++ G+ G + + ML++ P+V
Sbjct: 389 VEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGP-SPNV 447
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
T N I+ ++ +G ++ R E + G+ +T T+ LI + + + S+
Sbjct: 448 ITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNE 507
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M + TYN +I + + F +M G + T+ +I+G++
Sbjct: 508 MVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNR 567
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ + K + NV Y + I K +++ MK++ P+ T+S
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSS 627
Query: 467 MTEAYAKEG 475
+ + +EG
Sbjct: 628 LIDGLCQEG 636
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 143/344 (41%), Gaps = 2/344 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
++ LL+ LGK L R V+ EM+ GI P + A++ C + EA + + +
Sbjct: 169 SFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHI 228
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
C PD +TY++LI +L ++ M + PN+VT + ++ G G
Sbjct: 229 FHYGAC-PDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGR 287
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
++ +L M++ +P V + + G+ + K + G P +T+
Sbjct: 288 LEEAMDMLEEMIDKGI-EPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYT 346
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
LI + ++ V M T+ TY+ +I G + FE M +
Sbjct: 347 ALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSH 406
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
+T+T+ +I G+ + G K + K + NV YN +I K +
Sbjct: 407 DSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNA 466
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
R+ + MK + D+ T++ + +++ G + ++L E ++
Sbjct: 467 MRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVE 510
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 154/388 (39%), Gaps = 44/388 (11%)
Query: 127 ALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
AL +FE ML P TY ++ G + A +F++M++ G P Y +
Sbjct: 396 ALTIFEWMLSHDSL--PNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNII 453
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ Y + ++ A L MK + D +TY+ LI + E +L+ +M E
Sbjct: 454 IHIYFKQGYMNNAMRLLEMMKG-NGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHG 512
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
++PN VT N ++ GY D + M+ES P T N ++S F+ ++
Sbjct: 513 ISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNV-PSSGTYNMMISGFSKTNRISEA 571
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E + K G+ P T+ I K + M+K + TY+++I+
Sbjct: 572 ENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDG 631
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-------------------- 405
G A+ E + +G + + T+ L+ G G
Sbjct: 632 LCQEGQAEDAERLLD----DGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPS 687
Query: 406 ------LFHKVISSVRLASKLQIAEN---------VSFYNAVISACIKADDLMEMERVYK 450
L ++ + S L+I ++ +S Y A+I A KA+ + + +++
Sbjct: 688 EEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQ 747
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMND 478
M +KH D ++++ + KEG D
Sbjct: 748 TMLKKHWNSDEVVWTVLLDGLLKEGETD 775
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 2/148 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L G+ A ++ M ++G++P+ E+Y ALL C+N ++ A
Sbjct: 650 EPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALK 709
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ M T QP + Y LI A A + + ++Q M ++ + V ++L G
Sbjct: 710 IFDSMVT-TGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGL 768
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWT 288
K G D +L ++ES C + T
Sbjct: 769 LKEGETDLSLELLH-VMESRNCTLNFQT 795
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
K + ++A Q+ E +K++ QP E Y LLV K+ + E A K+F+ MV G +P
Sbjct: 666 KGRCYEADQLVESMKKKGL-QPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLS 724
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
Y AL+ A C+ + +A M + D ++ L+ + +L L
Sbjct: 725 DYKALICALCKANFRQKAQCMFQTMLK-KHWNSDEVVWTVLLDGLLKEGETDLSLELLHV 783
Query: 241 MDERSVTPNTVTQ 253
M+ R+ T N T+
Sbjct: 784 MESRNCTLNFQTR 796
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 166/380 (43%), Gaps = 10/380 (2%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
NT+ + L ++ FQ L F +P TY +L L K G+ + A+ V
Sbjct: 296 NTLINAYCREGLVEEAFQLLNSFS----SRGMEPGLLTYNAILYGLCKIGKYDRAKDVLI 351
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
EM++ G+ P Y LL CR I EA ++M PD+ ++S+LI V A
Sbjct: 352 EMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSR-RGVLPDLVSFSSLIG--VLA 408
Query: 229 MRFELIETL--YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
L + L +++M+ + P+ V I++ G+ + G ++ ML C DV
Sbjct: 409 RNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARG-CFMDV 467
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
T NT L+ K + + + G+ P+ TF LI Y K DK ++ E
Sbjct: 468 VTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEA 527
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M + TYN +I+ F G+ + ++ M + + D ++ ++NG+ ++GL
Sbjct: 528 MVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGL 587
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ ++ + I N+ N +I ++ D+ + +M PDS +++
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNT 647
Query: 467 MTEAYAKEGMNDKVYALEQE 486
+ + Y KE +K + L E
Sbjct: 648 LIDGYLKEANLEKAFILINE 667
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 161/370 (43%), Gaps = 5/370 (1%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+ +A ++F+ + + P ++ L+ +L ++G A F EM GI P
Sbjct: 375 RDNILEAQEIFDEMSRRGVL-PDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNV 433
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
+YT L+ +CRN + +A ++M C DV TY+T + F + L+ +
Sbjct: 434 IYTILIDGFCRNGALSDALKMRDEMLA-RGCFMDVVTYNTFLNGLCKKKMFADADMLFNE 492
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M ER + P+ T ++ GY K G D+ + M+ + KPD T NT++ F G
Sbjct: 493 MVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRT-NLKPDKVTYNTLIDGFCKAG 551
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
++ + ++ I P+ ++ ++ + + + ++ + M + T N
Sbjct: 552 EMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCN 611
Query: 361 NVIEAFSDMGDA-KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+I+ + GD K EY +M + G+ D+ ++ LI+GY K + K
Sbjct: 612 TLIKGYCRSGDMPKAYEY-LSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEK 670
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ N+ YN +++ + E E+V ++M E PD T+S + + + +
Sbjct: 671 RGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKE 730
Query: 480 VYALEQEKLQ 489
+ E LQ
Sbjct: 731 AFRFHDEMLQ 740
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 146/365 (40%), Gaps = 41/365 (11%)
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
KLL L ++G +LA +++ E+V GIE ++ A C++ + L+ M+
Sbjct: 227 KLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG- 285
Query: 209 PNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFD 267
D+ TY+TLI A C + + E + L R + P +T N +L G K G +D
Sbjct: 286 KGVFADIVTYNTLINAYCREGLVEEAFQLL-NSFSSRGMEPGLLTYNAILYGLCKIGKYD 344
Query: 268 QMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
+ + VL ML+ P+ T NT+L + + + +++ G+ P+ +F+ L
Sbjct: 345 RAKDVLIEMLQLGL-TPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSL 403
Query: 328 IGAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG---DAKHM-------- 375
IG + +Y + E R P + Y +I+ F G DA M
Sbjct: 404 IGVLARNGHLYQALMHFREMERSGIVP-DNVIYTILIDGFCRNGALSDALKMRDEMLARG 462
Query: 376 ------------------------EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
+ F +M GM D TF LI GY G K +
Sbjct: 463 CFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKAL 522
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
+ + + + YN +I KA ++ + ++ M K PD ++ + +
Sbjct: 523 NLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGF 582
Query: 472 AKEGM 476
G+
Sbjct: 583 CSSGL 587
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 76/186 (40%)
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
N +L G VD+ Y + GI+ T NI++ A K R ++ + + M
Sbjct: 226 NKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG 285
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
TYN +I A+ G + + GM+ T+ ++ G G + +
Sbjct: 286 KGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDR 345
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+ +L + N + YN ++ + D+++E + ++ M + PD +FS +
Sbjct: 346 AKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIG 405
Query: 470 AYAKEG 475
A+ G
Sbjct: 406 VLARNG 411
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 153/345 (44%), Gaps = 9/345 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEM-VEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
P T+ L+ L KSG+ E A ++F M P YT ++ C++ +D A
Sbjct: 98 PDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIE 157
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L+ M C P+V TYS L++ A R + TL Q+M R P+ + N +L G
Sbjct: 158 LLDLMNE-TGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGL 216
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K+ D+ ++ M+ S C P V T N+++ +F QVD R + G P+
Sbjct: 217 CKSRRLDEALELVQLMIRSG-CYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPD 275
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD--MGDAK-HMEY 377
+N +I + D ++++ M + TY+ +I+ DA +E
Sbjct: 276 VINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEA 335
Query: 378 T---FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVIS 434
E M G + T+ +I G A + ++ +R ++ ++S ++ VI
Sbjct: 336 ACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIG 395
Query: 435 ACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ K+ DL +++ M E+ C+P+ ++ + + +K G DK
Sbjct: 396 SLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDK 440
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 153/368 (41%), Gaps = 14/368 (3%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+++ +++ E P TY L+ L K+G+ + + EM G +P +Y L
Sbjct: 154 RAIELLDLMNETGCC-PNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTL 212
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L C++ +DEA L Q+ C P V TY++L++ + + + L Q M ER
Sbjct: 213 LNGLCKSRRLDEAL-ELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERG 271
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ + N V+ G + D + +L M+ +A C PDV T +TI+ +VD
Sbjct: 272 CPPDVINYNTVIAGLCRDARLDDAQALLKQMV-AARCVPDVITYSTIIDGLCKDWRVD-- 328
Query: 306 ERW--------YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
W E + G P T+ ++I + R + +++ M + S
Sbjct: 329 ADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLS 388
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
+++ VI + D F M K + + LI+G + G K + L
Sbjct: 389 SFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELM 448
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
+ V+ YN+V+ + E R+ + M K C PD ++ + +
Sbjct: 449 VE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCV 507
Query: 478 DKVYALEQ 485
++ Y L Q
Sbjct: 508 EEAYELFQ 515
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 150/348 (43%), Gaps = 13/348 (3%)
Query: 148 MKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKT 207
+ LLV G+ GQ A ++F E E P Y +L+ C+ +D+A+ L++M+
Sbjct: 5 LNLLVRAGQHGQ---AVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 208 --LPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+P P V ++ +I+ A RF ++ + TP+ +T NI++ K+G
Sbjct: 59 RGIP---PGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGR 115
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
++ ++ M S+ C P+V T T+++ G++D + G P T++
Sbjct: 116 VEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYS 175
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
+L+ K DK ++++ M + F YN ++ + M
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRS 235
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G T+ L+ + + + +++ S+ +V YN VI+ + L +
Sbjct: 236 GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDA 295
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ--EKLQML 491
+ + K+M C PD T+S + + K+ D + LE E L+M+
Sbjct: 296 QALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMM 343
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 138/339 (40%), Gaps = 10/339 (2%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
++ +AL++ +++ Y P TY L+ L +S Q + A ++ M E G P
Sbjct: 220 RRLDEALELVQLMIRSGCY-PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVIN 278
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-C----VDA-MRFELIE 235
Y ++A CR++ +D+A L QM C PDV TYST+I C VDA + E
Sbjct: 279 YNTVIAGLCRDARLDDAQALLKQM-VAARCVPDVITYSTIIDGLCKDWRVDADWKLEAAC 337
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
+ + M + PN T +V+ G +A Q +L M++S PD+ + + ++
Sbjct: 338 EILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEV-VPDLSSFSMVIGS 396
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
+D + + P + LI K DK V E M + F
Sbjct: 397 LCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE-SFRPG 455
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
+TYN+V++ +G + E M + D ++ LI G + +
Sbjct: 456 VATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQ 515
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
A V YN +++ K L + V ++ E
Sbjct: 516 AVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIE 554
>gi|384247929|gb|EIE21414.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 448
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 109/210 (51%), Gaps = 3/210 (1%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
W +A+QV + L++Q +P+ TY +L +SGQPE A +V+ M+ +G +PT YT
Sbjct: 159 WQEAVQVLDALEDQG-TKPEVRTYNTILSACNRSGQPEHALRVYERMLADGAQPTATTYT 217
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
AL++AY + I+EA M C+ +V TYS+LI AC A R++L L +M
Sbjct: 218 ALISAYGKTGKIEEALRIFQDM-VRRGCERNVITYSSLISACEKAGRWQLALELLDEMHR 276
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+ PNTVT N +L + G + + V M S CKPD + ++S F Q
Sbjct: 277 DNCKPNTVTFNALLSACAQGGQWKAAQDVFEQM-PSCGCKPDAVSYAILISAFDRGNQWC 335
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGK 333
+ ++ + G P+ +N++I A +
Sbjct: 336 RALQALDEMQGQGHRPDVGVYNVVIEALTR 365
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 119/263 (45%), Gaps = 1/263 (0%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
+V+TYS L+ C+ A EL +Y + TPN VT NI++ +GK G + + +VL
Sbjct: 107 NVHTYSALMNVCIKANELELALDVYGQLLREGCTPNLVTYNILIDIHGKMGNWQEAVQVL 166
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
+ + T KP+V T NTILS GQ + R YE+ G P T+ LI AYGK
Sbjct: 167 DALEDQGT-KPEVRTYNTILSACNRSGQPEHALRVYERMLADGAQPTATTYTALISAYGK 225
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
++ + + M + TY+++I A G + ++MH + K +T T
Sbjct: 226 TGKIEEALRIFQDMVRRGCERNVITYSSLISACEKAGRWQLALELLDEMHRDNCKPNTVT 285
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
F L++ A G + + Y +ISA + + + M+
Sbjct: 286 FNALLSACAQGGQWKAAQDVFEQMPSCGCKPDAVSYAILISAFDRGNQWCRALQALDEMQ 345
Query: 454 EKHCRPDSETFSIMTEAYAKEGM 476
+ RPD ++++ EA + G+
Sbjct: 346 GQGHRPDVGVYNVVIEALTRSGV 368
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 115/271 (42%), Gaps = 2/271 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ + K+ + ELA V+ +++ EG P Y L+ + + EA L+ +
Sbjct: 110 TYSALMNVCIKANELELALDVYGQLLREGCTPNLVTYNILIDIHGKMGNWQEAVQVLDAL 169
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ +P+V TY+T++ AC + + E +Y+ M P T ++ YGK G
Sbjct: 170 ED-QGTKPEVRTYNTILSACNRSGQPEHALRVYERMLADGAQPTATTYTALISAYGKTGK 228
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
++ R+ M+ C+ +V T ++++S G+ + ++ P T TFN
Sbjct: 229 IEEALRIFQDMVRRG-CERNVITYSSLISACEKAGRWQLALELLDEMHRDNCKPNTVTFN 287
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
L+ A + + V E M + +Y +I AF ++M +
Sbjct: 288 ALLSACAQGGQWKAAQDVFEQMPSCGCKPDAVSYAILISAFDRGNQWCRALQALDEMQGQ 347
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRL 416
G + D + +I +G+ + + ++
Sbjct: 348 GHRPDVGVYNVVIEALTRSGVLSAQLKAAQI 378
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 62/153 (40%)
Query: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
T+ +I G + K ++ MR TY+ ++ + + + Q+
Sbjct: 75 TYTTIISQCGSHQQLRKALELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDVYGQL 134
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
EG + T+ LI+ + G + + + + V YN ++SAC ++
Sbjct: 135 LREGCTPNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRSGQP 194
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
RVY+RM +P + T++ + AY K G
Sbjct: 195 EHALRVYERMLADGAQPTATTYTALISAYGKTG 227
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 43/87 (49%)
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
D T+ +I+ + K + V + NV Y+A+++ CIKA++L V
Sbjct: 71 CDVYTYTTIISQCGSHQQLRKALELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDV 130
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEG 475
Y ++ + C P+ T++I+ + + K G
Sbjct: 131 YGQLLREGCTPNLVTYNILIDIHGKMG 157
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 166/374 (44%), Gaps = 20/374 (5%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
NTV F + + AL + ++E+ P + TY ++ K G+ + A KVF+
Sbjct: 76 NTVIAGFCS---RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFD 132
Query: 169 EMVEEG-IEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC-V 226
EM+ +G ++P +Y AL+ YC +D A + ++M V TY+ L+ A +
Sbjct: 133 EMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE-RGVAMTVATYNLLVHALFM 191
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
D E E L ++M + + P+ T NI++ G+ K G + + M + V
Sbjct: 192 DGRGTEAYE-LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGV-RATV 249
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
T +++ + KGQV ++ +++ GI P+ +N LI ++ D+ +M
Sbjct: 250 VTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 309
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M K + TYN ++ +G ++M G++ D T+ LI+GY+ G
Sbjct: 310 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKG- 368
Query: 407 FHKVISSVRLASKLQIAENVSF------YNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
V ++R+ +++ N F YNA+I K + E + K M E PD
Sbjct: 369 --DVKDALRIRNEMM---NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPD 423
Query: 461 SETFSIMTEAYAKE 474
T+ + E E
Sbjct: 424 DSTYISLIEGLTTE 437
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 138/331 (41%), Gaps = 6/331 (1%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
T+ +L L +G+P A ++ +M P Y ++A +C + A + +M
Sbjct: 43 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 98
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS-VTPNTVTQNIVLGGYGKAG 264
+ P+ YTY T+I R + ++ +M + V P V N ++GGY G
Sbjct: 99 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 158
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
D M+E V T N ++ G+ E+ G+ P+ T+
Sbjct: 159 KLDTALLYRDRMVERGVAMT-VATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 217
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
NILI + K+ K + E M + T TY ++I A S G + + F++
Sbjct: 218 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 277
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
G++ D + LIN ++ +G + + K +IA + YN ++ + E
Sbjct: 278 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 337
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++ M ++ +PD T++ + Y+ +G
Sbjct: 338 ARKLIDEMTKRGIQPDLVTYNTLISGYSMKG 368
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 104/240 (43%), Gaps = 1/240 (0%)
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMER 307
PN VT N V+ G+ G ++ M E P+ +T T++S + G+VD +
Sbjct: 70 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 129
Query: 308 WYEKFRNFG-IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+++ G + PE +N LIG Y + D + M + T +TYN ++ A
Sbjct: 130 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 189
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G E+M +G+ D T+ LING+ G K + S+ + V
Sbjct: 190 FMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 249
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
Y ++I A K + E ++++ + RPD ++ + +++ G D+ + + E
Sbjct: 250 VTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 309
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 118/274 (43%), Gaps = 6/274 (2%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ L G+ A ++ EM +G+ P Y L+ +C+ + +A M
Sbjct: 181 TYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENM 240
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ + V TY++LI A + + + L+ + R + P+ V N ++ + +G
Sbjct: 241 -SRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 299
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D+ ++ G +E PD T NT++ G+VD + ++ GI P+ T+N
Sbjct: 300 IDRAFEIM-GEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYN 358
Query: 326 ILIGAYG-KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
LI Y K + D + E M K F T TYN +I+ G E ++M
Sbjct: 359 TLISGYSMKGDVKDALRIRNEMMNK-GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 417
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
G+ D T+ LI G + I RLA+
Sbjct: 418 NGITPDDSTYISLIEGLTTED--ERAIDDERLAA 449
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 121/286 (42%), Gaps = 3/286 (1%)
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS-VTPNTVTQNIVLGGY 260
L ++ +P +P+ TY+T+I R + + ++M ER + PN T V+ G+
Sbjct: 61 LELLRQMP--RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGW 118
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G D+ +V ML KP+ N ++ + ++G++D + ++ G+
Sbjct: 119 CKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMT 178
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+N+L+ A + ++E M TYN +I G+ K FE
Sbjct: 179 VATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE 238
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
M G++A T+ LI + G + A + I ++ YNA+I++ +
Sbjct: 239 NMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSG 298
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
++ + M++K PD T++ + G D+ L E
Sbjct: 299 NIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 344
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 169/363 (46%), Gaps = 9/363 (2%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
LK Q QALQ + + F+ K +Y L+ L K GQ A ++ + + ++P
Sbjct: 154 LKGQIHQALQFHDKVVALGFHLNKV-SYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNV 212
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+Y ++ + C+ L++EAF ++M + PDV TY+ LI + + L+
Sbjct: 213 VMYNTIIDSMCKVKLVNEAFDLYSEMVS-KGISPDVVTYNALISGFCIVGKMKDATDLFN 271
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
M ++ PN T NI++ G+ K + + VL+ M++ KPDV+T N+++ +
Sbjct: 272 KMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGI-KPDVFTYNSLMDRYCLV 330
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
+V+ + + G++P +++I+I + K + D+ ++ + M TY
Sbjct: 331 KEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTY 390
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
N++I+ +G + ++MH G+ D T+ +++ H+V ++ L +K
Sbjct: 391 NSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKN---HQVDKAIALLTK 447
Query: 420 LQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
++ I ++ Y ++ K L + V++ + K D ++ M + + G+
Sbjct: 448 MKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGL 507
Query: 477 NDK 479
D+
Sbjct: 508 FDE 510
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 136/314 (43%), Gaps = 8/314 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ G+ + A +FN+M+ E I P + L+ +C+ + EA
Sbjct: 245 PDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNV 304
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L M +PDV+TY++L+ + ++ + +R V PN + +I++ G+
Sbjct: 305 LAMMMK-QGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFC 363
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K D+ + M PDV T N+++ G++ + ++ + G+ +
Sbjct: 364 KIKKVDEAMNLFKEM-HCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDK 422
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+N ++ A K DK +++ M+ TY +++ G + FE
Sbjct: 423 ITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFED 482
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIK 438
+ +G D + +I G+ + GLF + S+ L SK++ N Y +I +
Sbjct: 483 LLVKGYILDVNIYTAMIQGFCSHGLFDE---SLDLLSKMEENGCIPNAVTYEIIICSLFD 539
Query: 439 ADDLMEMERVYKRM 452
D+ + E++ + M
Sbjct: 540 KDENDKAEKLLREM 553
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 112/267 (41%), Gaps = 3/267 (1%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+++ +A V M+ +Q +P TY L+ + A+ +FN + + G+ P
Sbjct: 295 ERRLKEAKNVLAMMMKQGI-KPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIH 353
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
Y+ ++ +C+ +DEA +M N PDV TY++LI + L +
Sbjct: 354 SYSIMIHGFCKIKKVDEAMNLFKEMHC-NNIIPDVVTYNSLIDGLCKLGKISYALKLVDE 412
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M +R V + +T N +L K D+ +L+ M + +PD+ T T++ G
Sbjct: 413 MHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGI-QPDICTYTTLVDGLCKNG 471
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+++ +E G + + +I + ++D+ ++ M + + TY
Sbjct: 472 RLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYE 531
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGM 387
+I + D + E +M G+
Sbjct: 532 IIICSLFDKDENDKAEKLLREMITRGL 558
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 123/318 (38%), Gaps = 37/318 (11%)
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
GQ L+ V ++++ G EP T L+ C I +A +++ L + +
Sbjct: 121 GQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVAL-GFHLNKVS 179
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y TLI + L + +D + V PN V N ++ K + ++ + S M+
Sbjct: 180 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 239
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
S PDV T N ++S F G++ + K I+P TFNIL+ + K+R
Sbjct: 240 -SKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRL 298
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
+ +V+ M K +G+K D T+ L
Sbjct: 299 KEAKNVLAMMMK-----------------------------------QGIKPDVFTYNSL 323
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
++ Y +K S+ + N+ Y+ +I K + E ++K M +
Sbjct: 324 MDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNI 383
Query: 458 RPDSETFSIMTEAYAKEG 475
PD T++ + + K G
Sbjct: 384 IPDVVTYNSLIDGLCKLG 401
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/317 (17%), Positives = 129/317 (40%), Gaps = 41/317 (12%)
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ N++ N +P ++ + ++ + V + + + +L++ M+ +T + V +I++ +
Sbjct: 58 SFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCF 117
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG---- 316
+ G VL+ +L+ +P+V T+ T++ KGQ+ ++++K G
Sbjct: 118 SQLGQNPLSFSVLAKILKMGY-EPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLN 176
Query: 317 -------------------------------IDPETRTFNILIGAYGKKRMYDKMSSVME 345
+ P +N +I + K ++ ++ +
Sbjct: 177 KVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYS 236
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
M TYN +I F +G K F +M E + + TF L++G+
Sbjct: 237 EMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKER 296
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ + + + K I +V YN+++ ++ + + ++ + ++ P+ ++S
Sbjct: 297 RLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYS 356
Query: 466 IMTEAYAK-----EGMN 477
IM + K E MN
Sbjct: 357 IMIHGFCKIKKVDEAMN 373
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 166/385 (43%), Gaps = 12/385 (3%)
Query: 108 VNTVAETFSDHVLKKQWF------QALQVFEMLKEQ--PFYQPKEGTYMKLLVLLGKSGQ 159
+ + FS ++L K +AL++ M+ + P +Y ++ K G
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211
Query: 160 PELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYS 219
+ A ++EM++ GI P Y +++AA C+ +D+A LN M PD TY+
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVK-NGVMPDCMTYN 270
Query: 220 TLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
+++ C E I L + M V P+ VT ++++ K G + ++ M +
Sbjct: 271 SILHGYCSSGQPKEAIGFL-KKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTK 329
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
KP++ T T+L +A KG + M + GI P+ F+ILI AY K+ D
Sbjct: 330 RGL-KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVD 388
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+ V MR+ + TY VI G + FEQM EG+ + LI
Sbjct: 389 QAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 448
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
+G + + + I N F+N++I + K ++E E++++ M +
Sbjct: 449 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVK 508
Query: 459 PDSETFSIMTEAYAKEGMNDKVYAL 483
P+ T++ + Y G D+ L
Sbjct: 509 PNVITYNTLINGYCLAGKMDEAMKL 533
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 136/326 (41%), Gaps = 7/326 (2%)
Query: 160 PELARKVFNEMVEEGI-EPTPEL--YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
P A +N M G E TP+L Y L+ CR +D F L + + D
Sbjct: 65 PAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIK-KGFRVDAI 123
Query: 217 TYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
++ L+K C D + ++ + + M E PN + NI+L G + +L
Sbjct: 124 AFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHM 183
Query: 276 MLE--SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
M + PDV + T+++ F +G D Y + + GI P+ T+N +I A K
Sbjct: 184 MADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCK 243
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+ DK V+ M K TYN+++ + G K ++M ++G++ D T
Sbjct: 244 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVT 303
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+ L++ G + +K + ++ Y ++ L+EM + M
Sbjct: 304 YSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 363
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDK 479
PD FSI+ AYAK+G D+
Sbjct: 364 RNGIHPDHYVFSILICAYAKQGKVDQ 389
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 142/353 (40%), Gaps = 2/353 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L K+G+ ARK+F+ M + G++P Y LL Y + E
Sbjct: 298 EPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG 357
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L+ M PD Y +S LI A + + ++ M ++ + PN VT V+G
Sbjct: 358 LLDLM-VRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL 416
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K+G + M++ P N+++ + + E + + GI
Sbjct: 417 CKSGRVEDAMLYFEQMIDEGL-SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLN 475
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T FN +I ++ K+ + + E M ++ TYN +I + G
Sbjct: 476 TIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLS 535
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
M + G+K +T T+ LINGY + + ++ ++ YN ++ +
Sbjct: 536 GMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTR 595
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
+ +Y R+ E + + T++I+ K + D + Q M L+
Sbjct: 596 RTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLK 648
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/422 (20%), Positives = 166/422 (39%), Gaps = 84/422 (19%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QA+ VF +++Q P TY ++ +L KSG+ E A F +M++EG+ P +Y +L
Sbjct: 389 QAMLVFSKMRQQGL-NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 447
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C + + A + +M C ++ S + C + E E L++ M
Sbjct: 448 IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE-SEKLFELMVRIG 506
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGM----------------------------- 276
V PN +T N ++ GY AG D+ ++LSGM
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566
Query: 277 -----LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+ES+ PD+ T N IL + + Y + G E T+NI++
Sbjct: 567 VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGL 626
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
K ++ D + + + + + T+N +I+A +G + F + G+ +
Sbjct: 627 CKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNY 686
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
T+ RL +AEN+ I L E+++++
Sbjct: 687 WTY--------------------RL-----MAENI----------IGQGLLEELDQLFLS 711
Query: 452 MKEKHCRPDSETFSIMTEAYAKEG-----------MNDKVYALEQEKLQMLLE--ASGHW 498
M++ C DS + + + G +++K ++LE + ++ + G +
Sbjct: 712 MEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 771
Query: 499 QQ 500
Q+
Sbjct: 772 QE 773
>gi|357502615|ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496611|gb|AES77814.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 125/268 (46%), Gaps = 4/268 (1%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
EML E P TY LL + G E A+K+ +EM ++GI Y L C+
Sbjct: 274 EMLAEGIV--PDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCK 331
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
ID A L +M + P V TYST+I C A E LY++M RS++ + V
Sbjct: 332 GGQIDLARRVLEEMSS-RRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSISVDRV 390
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
+ N ++G Y K G FD+ M ES K DV T N +LS + G D + R +E+
Sbjct: 391 SYNTMVGIYAKLGRFDEAIGQCKEM-ESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEE 449
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
+ + I P T T++ +I Y K M+ + V + +K Q Y ++I++ G
Sbjct: 450 MKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSIIDSLCKNGL 509
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+ M +G+K + TF +I+
Sbjct: 510 VESSIMLLIAMIEKGIKPNVVTFNSIID 537
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 146/324 (45%), Gaps = 3/324 (0%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
LG+ G+ A ++F EG T ++A+++AY RN +A M++ P
Sbjct: 188 LGRLGEINHALRLFESARLEGHGNTVYSFSAMISAYGRNGHFSDAVDLFRSMRSW-GVYP 246
Query: 214 DVYTYSTLIKACVDA-MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
++ +Y++LI A + F+++ + +M + P+ +T N +L GM++ +++
Sbjct: 247 NLISYNSLIDAGAKGEVDFDVVVKFFDEMLAEGIVPDRLTYNSLLSVCASKGMWETAQKL 306
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
LS M + + D +T NT L GQ+D+ R E+ + + P T++ +I
Sbjct: 307 LSEMDQKGIVR-DAFTYNTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCA 365
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K + + ++ E M+ +YN ++ ++ +G ++M + GMK D
Sbjct: 366 KANLLEDALNLYEEMKLRSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVV 425
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
T+ L++GY G++ +V I N Y+ +I K E VYK
Sbjct: 426 TYNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDF 485
Query: 453 KEKHCRPDSETFSIMTEAYAKEGM 476
K+ D ++ + ++ K G+
Sbjct: 486 KKAQLEVDVVFYTSIIDSLCKNGL 509
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 138/325 (42%), Gaps = 1/325 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
++ ++ G++G A +F M G+ P Y +L+ A + + + V
Sbjct: 215 SFSAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLIDAGAKGEVDFDVVVKFFDE 274
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
PD TY++L+ C +E + L +MD++ + + T N L K G
Sbjct: 275 MLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQ 334
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D RVL M S P V T +T++ A ++ YE+ + I + ++N
Sbjct: 335 IDLARRVLEEM-SSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYN 393
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
++G Y K +D+ + M TYN ++ + G + FE+M A
Sbjct: 394 TMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAW 453
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
+ +T T+ +I+ Y G+F + + + K Q+ +V FY ++I + K +
Sbjct: 454 NIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSIIDSLCKNGLVESS 513
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEA 470
+ M EK +P+ TF+ + +A
Sbjct: 514 IMLLIAMIEKGIKPNVVTFNSIIDA 538
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 146/333 (43%), Gaps = 5/333 (1%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMV--EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQ 204
Y+ +L G +G LA K F+ ++ + G +L + ++ R I+ A + L +
Sbjct: 144 YIYMLKEFGNTGHFLLATKCFDFIIWKQNGRIAKGKLVSTMIGTLGRLGEINHA-LRLFE 202
Query: 205 MKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG 264
L VY++S +I A F L++ M V PN ++ N ++ K
Sbjct: 203 SARLEGHGNTVYSFSAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLIDAGAKGE 262
Query: 265 M-FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
+ FD + + ML PD T N++LSV A+KG + ++ + GI + T
Sbjct: 263 VDFDVVVKFFDEMLAEGIV-PDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFT 321
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
+N + K D V+E M + T TY+ +I+ + + +E+M
Sbjct: 322 YNTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMK 381
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
+ D ++ ++ YA G F + I + + +V YNA++S +
Sbjct: 382 LRSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYD 441
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
E+ R+++ MK + P++ T+S M + Y K GM
Sbjct: 442 EVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGM 474
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 147/331 (44%), Gaps = 2/331 (0%)
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
A VF EM+E + P Y L+ +C ID A ++M+T C P+V TY+TL
Sbjct: 188 FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMET-KGCLPNVVTYNTL 246
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
I + + L + M + + PN ++ N+V+ G + G ++ VL+ M
Sbjct: 247 IDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGY 306
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
+V T NT++ + +G + + G+ P T+ LI + K ++
Sbjct: 307 SLDEV-TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
++ MR TY +++ FS G +M+ G T+ LING+
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
G I+ + + ++ +V Y+ V+S ++ D+ E RV + M EK +PD+
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDT 485
Query: 462 ETFSIMTEAYAKEGMNDKVYALEQEKLQMLL 492
T+S + + + ++ + L +E L++ L
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 167/367 (45%), Gaps = 21/367 (5%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y E TY L+ K G A + EM+ G+ P+ YT+L+ + C+ ++ A
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L+QM+ C P+ TY+TL+ + ++M++ +P+ VT N ++ G
Sbjct: 366 EFLDQMRVRGLC-PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ G + VL M E PDV + +T+LS F VD R + GI P
Sbjct: 425 HCVTGKMEDAIAVLEDMKEKGL-SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKP 483
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+T T++ LI + ++R + + E M ++ P TY +I A+ GD +
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLH 543
Query: 380 EQMHAEGMKADTKTFCCLINGYANAG-----------LFHK--VISSVRLASKLQIAENV 426
+M +G+ D T+ LING LF++ V S V + ++ N+
Sbjct: 544 NEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNI 603
Query: 427 SFYNAVISA----CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
F +V+S C+K + E ++V++ M K+ +PD ++IM + + G K Y
Sbjct: 604 EF-KSVVSLIKGFCMKG-MMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYT 661
Query: 483 LEQEKLQ 489
L +E ++
Sbjct: 662 LYKEMVK 668
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 155/358 (43%), Gaps = 4/358 (1%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
EML+ Q P TY L+ +G ++A +F++M +G P Y L+ YC+
Sbjct: 195 EMLESQ--VSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
ID+ F L M L +P++ +Y+ +I R + + + +M+ R + + V
Sbjct: 253 LRKIDDGFKLLRSM-ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
T N ++ GY K G F Q + + ML P V T +++ G ++ + ++
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGL-TPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
R G+ P RT+ L+ + +K ++ V+ M F + TYN +I G
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNA 431
+ E M +G+ D ++ +++G+ + + + R + I + Y++
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 432 VISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+I + E +Y+ M PD T++ + AY EG +K L E ++
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 120/300 (40%), Gaps = 27/300 (9%)
Query: 108 VNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
V T + H + + A+ V E +KE+ P +Y +L +S + A +V
Sbjct: 415 VVTYNALINGHCVTGKMEDAIAVLEDMKEKGL-SPDVVSYSTVLSGFCRSYDVDEALRVK 473
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKAC 225
EMVE+GI+P Y++L+ +C EA +M LP PD +TY+ LI A
Sbjct: 474 REMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP---PDEFTYTALINAY 530
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
E L+ +M E+ V P+ VT ++++ G K + +R+L + + D
Sbjct: 531 CMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSD 590
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
V T +T++ +N E ++ LI + K M + V E
Sbjct: 591 V-TYHTLIENCSN--------------------IEFKSVVSLIKGFCMKGMMTEADQVFE 629
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
M + YN +I GD + +++M G T T L+ G
Sbjct: 630 SMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEG 689
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 112/269 (41%), Gaps = 37/269 (13%)
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL-SVFANKGQVDMMERWYEKF 312
++V+ Y + + D+ ++ + ++ P V + N +L + +K + E +++
Sbjct: 138 DLVVKSYSRLSLIDKALSIVH-LAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 313 RNFGIDPETRTFNILIGAYG-------KKRMYDKMSS------VMEY---------MRKL 350
+ P T+NILI + ++DKM + V+ Y +RK+
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 351 Q--FPWTSS-----------TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
F S +YN VI G K + + +M+ G D T+ L
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
I GY G FH+ + + + +V Y ++I + KA ++ +M+ +
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 458 RPDSETFSIMTEAYAKEGMNDKVYALEQE 486
P+ T++ + + ++++G ++ Y + +E
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLRE 405
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 1/175 (0%)
Query: 316 GIDPETRTFNILIGAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKH 374
G P ++N ++ A + KR +V + M + Q TYN +I F G+
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 375 MEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVIS 434
F++M +G + T+ LI+GY +R + + N+ YN VI+
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 435 ACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ + E+ V M + D T++ + + Y KEG + + E L+
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 149/348 (42%), Gaps = 16/348 (4%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ ++G E AR+V M + + L+ A C + +A V L+ M
Sbjct: 130 TYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGM 189
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
C PDV TY+ L++A + L M PN VT N+++ + G
Sbjct: 190 -LCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGD 248
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW------YEKFRNFGIDP 319
DQ +L+ L S CKP+ NT+L F + +ERW ++ P
Sbjct: 249 VDQARELLNS-LPSRGCKPNTVNYNTVLKGFCS------IERWVDADEILDEMVRENCPP 301
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
T N++I +K + K++ +E M K TYN VI + G+
Sbjct: 302 NEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELL 361
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVIS-SVRLASKLQIAENVSFYNAVISACIK 438
M + G K D T+ ++ G +A + ++++ ++ +N +F N +IS +
Sbjct: 362 SNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTF-NTIISFWCQ 420
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+++ V+K+M EK C P+S T+S + K G ++ L E
Sbjct: 421 KGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNE 468
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 137/331 (41%), Gaps = 11/331 (3%)
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
+L+ L + G+P A +V G E T Y AL+ YCR L+++A + M
Sbjct: 101 RLVRDLCRRGRPADAARVVEAC---GPEATAATYGALVDGYCRAGLLEDARRVVGGMPAH 157
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
Y ++ LI A + R + M R P+ VT NI+L K + Q
Sbjct: 158 VQAS-SAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQ 216
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
++ M + C+P+ T N I+ +G VD + G P T +N ++
Sbjct: 217 ALELIDFM-RAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVL 275
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
+ + +++ M + P +T N +I G + + E+M G
Sbjct: 276 KGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCT 335
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDLMEM 445
A+ T+ +I+G G V S++ L S +Q ++ YN V+ AD +
Sbjct: 336 ANVVTYNAVISGMCEQG---NVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDA 392
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
E + +M + PD+ TF+ + + ++G+
Sbjct: 393 EELMIKMSQNDRLPDNSTFNTIISFWCQKGL 423
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 148/344 (43%), Gaps = 7/344 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY LL K A ++ + M EG EP Y ++ A CR +D+A
Sbjct: 196 PDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQAREL 255
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
LN + + C+P+ Y+T++K R+ + + +M + PN T N+++
Sbjct: 256 LNSLPSR-GCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLC 314
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G+ ++ L M + C +V T N ++S +G VD ++FG P+
Sbjct: 315 RKGLLQKVTLYLEKMSKHG-CTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDI 373
Query: 322 RTFN-ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+N +L G R D +++ + + P +ST+N +I + G F+
Sbjct: 374 VTYNTVLKGLCSADRWEDAEELMIKMSQNDRLP-DNSTFNTIISFWCQKGLILQAFEVFK 432
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
QM +G ++ T+ +I G AG + + + + + Y + + K D
Sbjct: 433 QMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTD-KMYRVLTESLNKED 491
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
+ E+ +V ++++ P + ++ + + G D YA++
Sbjct: 492 KIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTD--YAID 533
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 53/140 (37%), Gaps = 40/140 (28%)
Query: 124 WFQ---ALQVFEMLKEQP--FYQPKEGTYMKLLVLLGKSGQPELARKVFNEM-------- 170
W Q LQ FE+ K+ P P TY ++ L K+G+ E A ++ NEM
Sbjct: 418 WCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTD 477
Query: 171 ---------------VEE-----------GIEPTPELYTALLAAYCRNSLIDEAFVTLNQ 204
+EE GI P LY +L CRN D A L
Sbjct: 478 KMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLAD 537
Query: 205 MKTLPNCQPDVYTYSTLIKA 224
M + C PD TY LI+
Sbjct: 538 MVSC-GCMPDESTYIILIEG 556
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 79/188 (42%), Gaps = 3/188 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY +L L + + E A ++ +M + P + +++ +C+ LI +AF
Sbjct: 370 KPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFE 429
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
QM C P+ TYST+I A + E L +M + + + + ++
Sbjct: 430 VFKQMPE-KGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKMYR-VLTESL 487
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K +++ +V+ + +S P NT+L G+ D + G P+
Sbjct: 488 NKEDKIEEVVQVVHKLQDSGI-SPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPD 546
Query: 321 TRTFNILI 328
T+ ILI
Sbjct: 547 ESTYIILI 554
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 148/352 (42%), Gaps = 40/352 (11%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P +Y L+ L + A K+F ++ +G EP Y L+ + ++EAF
Sbjct: 255 KPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFE 314
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ + +PD TY+ I A R E + +DMDE+ P+ V+ N V+ G
Sbjct: 315 LFSGLVK-HGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGL 373
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K D+ E +LSGM E+ C P+ + NT++ G+ +++ G+ P
Sbjct: 374 CKEKRVDEAEVLLSGM-EAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPT 432
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+NIL+ K R ++ EA + F+
Sbjct: 433 VVTYNILVDGLCKARQEGRIK----------------------EAIT----------LFD 460
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACI 437
M +G D T+ LI+G AG K+ + RL ++ NV YN++IS
Sbjct: 461 AMIEKGRVPDVVTYSALIDGLGKAG---KLDDARRLLGAMEAKGCIPNVYTYNSLISGLC 517
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
D + E ++ M EK C PD+ T+ + A K+ M DK AL L+
Sbjct: 518 GLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLE 569
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 149/351 (42%), Gaps = 7/351 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
A VF+ +++ F+ P TY LL L G+ A+ ++ M++ G P Y L
Sbjct: 68 DAQTVFDGMRKHGFW-PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTL 126
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L +C+ +DEA + PDV TY+ LI A + + + + Q M S
Sbjct: 127 LHGFCKVGKLDEALKIFDG-AVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSES 185
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK-GQVDM 304
+ P+ VT N ++ G K G D+ ++ P+V T +T++S + +++
Sbjct: 186 LVPDVVTYNSLVNGLCKNGRVDEARM----LIVDKGFSPNVITYSTLISGLCRELRRLES 241
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ EK G P+ ++N LI +++ + + + + + TYN +I+
Sbjct: 242 ARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILID 301
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
F + G++ D T+ I+G AG + ++ +
Sbjct: 302 GLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVP 361
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+V +NAVI+ K + E E + M+ K C P++ +F+ + + G
Sbjct: 362 DVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAG 412
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 146/338 (43%), Gaps = 7/338 (2%)
Query: 139 FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA 198
Y P T LL L KSG+ E A + +++ +G+ + ++ CR S I +A
Sbjct: 11 IYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDIST-FNIYISGLCRASRIGDA 69
Query: 199 FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
+ M+ P+ TY+ L+ + R + LY+ M + +P+ VT N +L
Sbjct: 70 QTVFDGMRK-HGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLH 128
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
G+ K G D+ ++ G ++ PDV T N +++ F ++D +R ++ + +
Sbjct: 129 GFCKVGKLDEALKIFDGAVKRGFV-PDVVTYNALINGFCKADKLDEAQRILQRMVSESLV 187
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS-DMGDAKHMEY 377
P+ T+N L+ K D+ + M + K F TY+ +I ++ +
Sbjct: 188 PDVVTYNSLVNGLCKNGRVDE--ARMLIVDK-GFSPNVITYSTLISGLCRELRRLESARQ 244
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
E+M G K D ++ LI+G A + + + V YN +I +
Sbjct: 245 LLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLL 304
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
K D + E ++ + + PD+ T+++ + K G
Sbjct: 305 KEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAG 342
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 127/289 (43%), Gaps = 42/289 (14%)
Query: 117 DHVLKKQWF-QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
D +LK+ +A ++F L + +P TY + L K+G+ E A + +M E+G
Sbjct: 301 DGLLKEDRVNEAFELFSGLVKHGL-EPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGC 359
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
P + A++ C+ +DEA V L+ M+ C P+ +++TLI A +++
Sbjct: 360 VPDVVSHNAVINGLCKEKRVDEAEVLLSGMEA-KGCSPNAISFNTLICGQCRAGKWKKAM 418
Query: 236 TLYQDMDERSVTPNTVTQNIV--------------------------------------L 257
T +++M +R V P VT NI+ +
Sbjct: 419 TTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALI 478
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
G GKAG D R+L G +E+ C P+V+T N+++S +VD + G
Sbjct: 479 DGLGKAGKLDDARRLL-GAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGC 537
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
P+T T+ +I A K+ M DK ++ + + TS Y ++I+
Sbjct: 538 VPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGL 586
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 10/223 (4%)
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
++D++ R+ S PD +T+ +L G+++ R+ E+ G+ + TF
Sbjct: 4 VYDKLVRIYS---------PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTF 53
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
NI I + +V + MRK F TYN ++ + G + +E+M
Sbjct: 54 NIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIK 113
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
G D T+ L++G+ G + + A K +V YNA+I+ KAD L E
Sbjct: 114 AGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDE 173
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEK 487
+R+ +RM + PD T++ + K G D+ L +K
Sbjct: 174 AQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDK 216
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 174/396 (43%), Gaps = 50/396 (12%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE-GIEPTPELYTA 184
++++VF+ +KE P T+ LL ++ K G+ +A+++F+EM++ G+ P +
Sbjct: 183 ESIKVFKTMKEIGV-SPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNI 241
Query: 185 LLAAYCRNSLIDEAF---------------VTLNQM---------------------KTL 208
L+ +C NS++DE F VT N + K
Sbjct: 242 LIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKS 301
Query: 209 PNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFD 267
PN P+V TY+TLI+ C+ E + +L +M R + PN +T N ++ G +A D
Sbjct: 302 PNLSPNVVTYTTLIRGYCMKQDMAEAL-SLLAEMVSRGLKPNKITYNTLIQGLCEAQKLD 360
Query: 268 QMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
+++ +L GM+ PD T+NT++ G+++ +EK + P++ T+++L
Sbjct: 361 KIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVL 420
Query: 328 IGAYGKK-------RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+ + ++ +D+++ + + + YN + E G K E F
Sbjct: 421 VRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFR 480
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI-KA 439
Q+ G + D ++ LI G+ G + L + + Y +I + K
Sbjct: 481 QLMKRGTQ-DPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKG 539
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
D ++ + + K +K H P + F + A ++G
Sbjct: 540 DPVLAHKSLEKMLKSSHL-PTTAIFHSILAALVEKG 574
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 162/385 (42%), Gaps = 49/385 (12%)
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
G +G + + KVF M E G+ P+ + +LL+ + A ++M PD
Sbjct: 176 GWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPD 235
Query: 215 VYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
YT++ LI+ C+++M E +++M P+ VT N ++ G +AG V+
Sbjct: 236 TYTFNILIRGFCMNSMVDEGF-WFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVV 294
Query: 274 SGML-ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
GM+ +S P+V T T++ + K + + + G+ P T+N LI
Sbjct: 295 KGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLC 354
Query: 333 KKRMYDKMSSVMEYM-RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
+ + DK+ ++E M F + T N +I+A MG + FE+M ++ D+
Sbjct: 355 EAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDS 414
Query: 392 KTFCCLINGYANAGLFHKVISSV-RLASKLQIAEN------VSFYNAVISACIKADDLME 444
T+ L+ G F + LA K + + V+ YN + +
Sbjct: 415 ATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKK 474
Query: 445 MERVYKRMKEK--------------HCR--------------------PDSETFSIMTEA 470
ERV++++ ++ HCR PD+ET+ +M +
Sbjct: 475 AERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDG 534
Query: 471 YAKEGMNDKVYALEQEKLQMLLEAS 495
K+G D V A + L+ +L++S
Sbjct: 535 LLKKG--DPVLA--HKSLEKMLKSS 555
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 114/262 (43%), Gaps = 5/262 (1%)
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
+++LI++ A F+ +++ M E V+P+ VT N +L K G +++ ML
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
++ PD +T N ++ F VD ++++ F DP+ T+N L+ +
Sbjct: 228 DTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKV 287
Query: 338 DKMSSVMEYMRKLQFPWTSS---TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
+V++ M K + P S TY +I + D +M + G+K + T+
Sbjct: 288 KIAHNVVKGMVK-KSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITY 346
Query: 395 CCLINGYANAGLFHKVISSVR-LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
LI G A K+ + + + N +I A L E V+++M
Sbjct: 347 NTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMS 406
Query: 454 EKHCRPDSETFSIMTEAYAKEG 475
E +PDS T+S++ + + G
Sbjct: 407 ELRVQPDSATYSVLVRSLCQRG 428
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 74/168 (44%), Gaps = 4/168 (2%)
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
R FN LI +YG ++ + V + M+++ + T+N+++ G + F++
Sbjct: 166 RFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDE 225
Query: 382 M-HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
M G+ DT TF LI G+ + + + S+ + +V YN ++ +A
Sbjct: 226 MLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAG 285
Query: 441 DLMEMERVYKRM--KEKHCRPDSETFSIMTEAYA-KEGMNDKVYALEQ 485
+ V K M K + P+ T++ + Y K+ M + + L +
Sbjct: 286 KVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAE 333
>gi|242078445|ref|XP_002443991.1| hypothetical protein SORBIDRAFT_07g005470 [Sorghum bicolor]
gi|241940341|gb|EES13486.1| hypothetical protein SORBIDRAFT_07g005470 [Sorghum bicolor]
Length = 602
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 176/380 (46%), Gaps = 8/380 (2%)
Query: 97 KLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGK 156
K +R K + + T K+W ++ E L+ Q ++ E ++ L+ GK
Sbjct: 93 KTQRSGKGPLPRDVILGTLVRFKQLKKWNIVSEILEWLRTQHWWDFSEMDFLMLVTAYGK 152
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
G A +V M ++G +P+ T L+ AY R +A +M+T +P
Sbjct: 153 LGDFSRAERVLKYMNKKGYQPSVISQTGLMEAYGRGKQYRKAEAVFRRMQT-SGPEPSPV 211
Query: 217 TYSTLIKACVDAMRFELIETLYQDM---DERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
TY ++K+ V+ +++ E +++D+ S P+ ++++ Y KAG + Q ++
Sbjct: 212 TYQIILKSLVEGDKYKEAEAIFEDLLNEKRTSFKPDQKMFHMMIYMYKKAGDYAQARKLF 271
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
+ M E V T N+++S + +V + Y++ + G+ P+ ++++LI AYGK
Sbjct: 272 AQMSERKIPLSTV-TFNSLMSFETDYKEVSSI---YDQMQRAGMKPDVVSYSLLIKAYGK 327
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
R ++ +V E M T +YN +++AF+ G F+ M ++ D +
Sbjct: 328 ARREEEALAVFEEMLDAGVRPTRKSYNILLDAFAISGLVDEANTVFKAMRRHRVEPDLCS 387
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+ ++ Y NA + R + NV Y ++ K +++ ++ RVY+RM+
Sbjct: 388 YTTMVLAYVNASDMNGAEKFFRRIKDDGLKPNVVVYGTLMKGYSKLNNVEKVMRVYERMR 447
Query: 454 EKHCRPDSETFSIMTEAYAK 473
+ P+ ++ + +A+ +
Sbjct: 448 IQGVEPNQTIYTTIMDAHGR 467
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 2/188 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P +Y L+ GK+ + E A VF EM++ G+ PT + Y LL A+ + L+DEA
Sbjct: 312 KPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILLDAFAISGLVDEANT 371
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
M+ +PD+ +Y+T++ A V+A E ++ + + + PN V ++ GY
Sbjct: 372 VFKAMRR-HRVEPDLCSYTTMVLAYVNASDMNGAEKFFRRIKDDGLKPNVVVYGTLMKGY 430
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K +++ RV M +P+ TI+ W+++ G P+
Sbjct: 431 SKLNNVEKVMRVYERM-RIQGVEPNQTIYTTIMDAHGRNSDFGNAVIWFKEMEARGYPPD 489
Query: 321 TRTFNILI 328
+ NIL+
Sbjct: 490 QKAKNILL 497
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 87/200 (43%), Gaps = 6/200 (3%)
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
+++ + G ER + G P + L+ AYG+ + Y K +V M+
Sbjct: 146 LVTAYGKLGDFSRAERVLKYMNKKGYQPSVISQTGLMEAYGRGKQYRKAEAVFRRMQTSG 205
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE---GMKADTKTFCCLINGYANAGLFH 408
+ TY ++++ + K E FE + E K D K F +I Y AG +
Sbjct: 206 PEPSPVTYQIILKSLVEGDKYKEAEAIFEDLLNEKRTSFKPDQKMFHMMIYMYKKAGDYA 265
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ S+ +I + +N+++S D E+ +Y +M+ +PD ++S++
Sbjct: 266 QARKLFAQMSERKIPLSTVTFNSLMSF---ETDYKEVSSIYDQMQRAGMKPDVVSYSLLI 322
Query: 469 EAYAKEGMNDKVYALEQEKL 488
+AY K ++ A+ +E L
Sbjct: 323 KAYGKARREEEALAVFEEML 342
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 139/321 (43%), Gaps = 1/321 (0%)
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
+ G+ + A+ NE+ GI+ +P +Y LL + +L+DEA V L + P PD
Sbjct: 155 ARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEA-VLLFREHLEPYFVPD 213
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
VY+++ LI+ + +Q+M P+ V+ N ++ G+ + + +L
Sbjct: 214 VYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLK 273
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
+ PDV T +I+S + G + +++ + GI P TFN+LI +GK
Sbjct: 274 EDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKV 333
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
+ E M L T+ ++I+ + G+ +E+M + + T+
Sbjct: 334 GNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTY 393
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
LIN + + +R ++ YN VI KA + E + M+E
Sbjct: 394 AVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQE 453
Query: 455 KHCRPDSETFSIMTEAYAKEG 475
K CRPD TF+I+ +G
Sbjct: 454 KKCRPDKITFTILIIGNCMKG 474
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 144/355 (40%), Gaps = 36/355 (10%)
Query: 137 QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLID 196
+P++ P ++ L+ L + G+ + A + F M G P Y L+ +CR + I
Sbjct: 207 EPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEIS 266
Query: 197 EAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIV 256
+ L + + PDV TY+++I + L+ +M + PN T N++
Sbjct: 267 KGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVL 326
Query: 257 LGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG 316
+ G+GK G + ML C PDV T +++ + +G+V+ + +E+ +
Sbjct: 327 IDGFGKVGNMRSAMVMYEKMLLLG-CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRN 385
Query: 317 IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME 376
+ P T+ +LI A K+ + + + +++ + YN VI+ F G
Sbjct: 386 LSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEAN 445
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
+ +M + + D TF LI G G + IS +FY
Sbjct: 446 FIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAIS--------------TFY------- 484
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQML 491
+M E +C PD T + + K GM ++ ++Q LQ L
Sbjct: 485 --------------KMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKL 525
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 150/365 (41%), Gaps = 44/365 (12%)
Query: 111 VAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEM 170
V + FSD +L L+ FE + TY L+ L K G + A+ VF+ M
Sbjct: 82 VIKRFSDPLL------GLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCM 135
Query: 171 VEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMR 230
+GI P + L+++Y R +D A LN+ V+ Y + V
Sbjct: 136 RSDGILPDSSILELLVSSYARMGKLDSAKNFLNE----------VHCYGIKVSPFV---- 181
Query: 231 FELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMN 290
Y ++ V N V + ++L + +E PDV++ N
Sbjct: 182 -------YNNLLNMLVKQNLVDEAVLL-------FREHLEPYFV---------PDVYSFN 218
Query: 291 TILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM-EYMRK 349
++ G++D +++ NFG P+ ++N LI + + K ++ E M
Sbjct: 219 ILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLI 278
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
TY ++I + +GD K F++M + G+K + TF LI+G+ G
Sbjct: 279 KGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRS 338
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+ L +V + ++I + ++ + ++++ MK ++ P+ T++++
Sbjct: 339 AMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLIN 398
Query: 470 AYAKE 474
A KE
Sbjct: 399 ALCKE 403
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 164/367 (44%), Gaps = 17/367 (4%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE-EGIEPTPELYTA 184
+A+ + + + E QP + TY ++ + K G A + +M E I P +Y+A
Sbjct: 202 EAVALLDRMMEDGL-QPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSA 260
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
++ + C++ +A +M+ PD++TY+++I + R+ E L Q+M ER
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQE-KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
++P+ VT N ++ + K G F + + ML P+ T N+++ F + ++D
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGII-PNTITYNSMIDGFCKQDRLDA 378
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAY-GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
E + G P+ TF LI Y G KR+ D M + E R+ + TYN +I
Sbjct: 379 AEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRR-GLVANTVTYNTLI 437
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ-- 421
F +GD +QM + G+ D T L++G + G + + K +
Sbjct: 438 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 497
Query: 422 ---------IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
+ +V YN +I I +E E +Y+ M + PD+ T+S M +
Sbjct: 498 LDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557
Query: 473 KEGMNDK 479
K+ D+
Sbjct: 558 KQSRLDE 564
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 137/343 (39%), Gaps = 54/343 (15%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W A Q+ + + E+ P TY L+ K G+ A ++++EM+ GI P Y
Sbjct: 305 RWSDAEQLLQEMLERKI-SPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITY 363
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
+++ +C+ +D A M T C PDV+T++TLI A R + L +M
Sbjct: 364 NSMIDGFCKQDRLDAAEDMFYLMAT-KGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMP 422
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC-------------------- 282
R + NTVT N ++ G+ G + + M+ S C
Sbjct: 423 RRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 482
Query: 283 -------------------------KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
+PDV T N ++ N+G+ E YE+ + GI
Sbjct: 483 DALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGI 542
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P+T T++ +I K+ D+ + + M F T+N +I + G
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLE 602
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISS 413
F +M G+ AD + LI G+ G +F ++ISS
Sbjct: 603 LFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISS 645
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 165/408 (40%), Gaps = 22/408 (5%)
Query: 81 IPGYRSKRTPIKNLKK----KLERKAKAKAWVNTVAETFSDHVLK--------KQWFQAL 128
+ G++ +P ++ + + R AKA + F LK K A+
Sbjct: 5 VCGFKCSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAI 64
Query: 129 QVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
+F +ML+ +P P + KL+ ++ + +P+L ++ +M + I + L+
Sbjct: 65 DLFSDMLRSRPL--PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIK 122
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSV 246
+C S + A T ++ L PDV T++TL+ CV+ E ++ +Q M E +
Sbjct: 123 CFCSCSKLPFALSTFGKITKL-GLHPDVVTFTTLLHGLCVEDRVSEALDFFHQ-MFETTC 180
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PN VT ++ G + G + +L M+E +P T TI+ KG
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL-QPTQITYGTIVDGMCKKGDTVSAL 239
Query: 307 RWYEKFRNFG-IDPETRTFNILIGAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
K I P ++ +I + K R D + E K FP TYN++I
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP-DLFTYNSMIV 298
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
F G E ++M + D T+ LIN + G F + I
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIP 358
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
N YN++I K D L E ++ M K C PD TF+ + + Y
Sbjct: 359 NTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYC 406
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 171/424 (40%), Gaps = 53/424 (12%)
Query: 114 TFSDHVLKK-QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE 172
T D + KK AL + ++E P Y ++ L K G+ A+ +F EM E
Sbjct: 224 TIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283
Query: 173 EGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE 232
+GI P Y +++ +C + +A L +M PDV TY+ LI A V +F
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE-RKISPDVVTYNALINAFVKEGKFF 342
Query: 233 LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTI 292
LY +M R + PNT+T N ++ G+ K D E + ++ + C PDV+T T+
Sbjct: 343 EAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFY-LMATKGCSPDVFTFTTL 401
Query: 293 LSVFANKGQVD-MMERWYEKFRNFGIDPETRTFNILIGAYG-----------KKRMYD-- 338
+ + ++D ME +E R G+ T T+N LI + ++M
Sbjct: 402 IDGYCGAKRIDDGMELLHEMPRR-GLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 460
Query: 339 -------------------KMSSVMEYMRKLQ---------FPWTSS-----TYNNVIEA 365
K+ +E + +Q P+ TYN +I
Sbjct: 461 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICG 520
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS-VRLASKLQIAE 424
+ G E +E+M G+ DT T+ +I+G + V + SK +
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSK-SFSP 579
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
NV +N +I+ KA + + ++ M + D+ + + + K G + +
Sbjct: 580 NVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIF 639
Query: 485 QEKL 488
QE +
Sbjct: 640 QEMI 643
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 95/205 (46%), Gaps = 15/205 (7%)
Query: 109 NTVAETFSDHVLKK---QWFQALQV--FEMLKEQPF--YQPKEGTYMKLLVLLGKSGQPE 161
NT+ + D+ K + F+A+Q ++ PF +P TY L+ L G+
Sbjct: 469 NTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFL 528
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA---FVTLNQMKTLPNCQPDVYTY 218
A +++ EM GI P Y++++ C+ S +DEA FV++ PN V T+
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPN----VVTF 584
Query: 219 STLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
+TLI A R + L+ +M R + + + ++ G+ K G + + M+
Sbjct: 585 NTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMIS 644
Query: 279 SATCKPDVWTMNTILSVFANKGQVD 303
S PD T+ +L+ F +K +++
Sbjct: 645 SGV-YPDTITIRNMLTGFWSKEELE 668
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 94/221 (42%), Gaps = 15/221 (6%)
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
+E + D+++ N ++ F + ++ + K G+ P+ TF L+ +
Sbjct: 105 MERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVE-- 162
Query: 337 YDKMSSVMEYMRKLQFPWTSS----TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
D++S +++ ++ F T T+ ++ G ++M +G++
Sbjct: 163 -DRVSEALDFFHQM-FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQI 220
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQ----IAENVSFYNAVISACIKADDLMEMERV 448
T+ +++G G +S++ L K++ I NV Y+A+I + K + + +
Sbjct: 221 TYGTIVDGMCKKG---DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ M+EK PD T++ M + G L QE L+
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 146/333 (43%), Gaps = 2/333 (0%)
Query: 144 EGTYMKLLVL-LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTL 202
+ + ++LLV + G+ + A+ NE+ GI+ +P +Y LL + +L+DEA V L
Sbjct: 143 DSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEA-VLL 201
Query: 203 NQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGK 262
+ P PDVY+++ LI+ + +Q+M P+ V+ N ++ G+ +
Sbjct: 202 FREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCR 261
Query: 263 AGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETR 322
+ +L + PDV T +I+S + G + +++ + GI P
Sbjct: 262 VNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDF 321
Query: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
TFN+LI +GK + E M L T+ ++I+ + G+ +E+M
Sbjct: 322 TFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEM 381
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
+ + T+ LIN + + +R ++ YN VI KA +
Sbjct: 382 KVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKV 441
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
E + M+EK CRPD TF+I+ +G
Sbjct: 442 DEANFIVAEMQEKKCRPDKITFTILIIGNCMKG 474
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 144/355 (40%), Gaps = 36/355 (10%)
Query: 137 QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLID 196
+P++ P ++ L+ L + G+ + A + F M G P Y L+ +CR + I
Sbjct: 207 EPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEIS 266
Query: 197 EAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIV 256
+ L + + PDV TY+++I + L+ +M + PN T N++
Sbjct: 267 KGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVL 326
Query: 257 LGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG 316
+ G+GK G + ML C PDV T +++ + +G+V+ + +E+ +
Sbjct: 327 IDGFGKVGNMRSAMVMYEKMLLLG-CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRN 385
Query: 317 IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME 376
+ P T+ +LI A K+ + + + +++ + YN VI+ F G
Sbjct: 386 LSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEAN 445
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
+ +M + + D TF LI G G + IS +FY
Sbjct: 446 FIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAIS--------------TFY------- 484
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQML 491
+M E +C PD T + + K GM ++ ++Q LQ L
Sbjct: 485 --------------KMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKL 525
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 150/365 (41%), Gaps = 44/365 (12%)
Query: 111 VAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEM 170
V + FSD +L L+ FE + TY L+ L K G + A+ VF+ M
Sbjct: 82 VIKRFSDPLL------GLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCM 135
Query: 171 VEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMR 230
+GI P + L+++Y R +D A LN+ V+ Y + V
Sbjct: 136 RSDGILPDSSILELLVSSYARMGKLDSAKNFLNE----------VHCYGIKVSPFV---- 181
Query: 231 FELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMN 290
Y ++ V N V + ++L + +E PDV++ N
Sbjct: 182 -------YNNLLNMLVKQNLVDEAVLL-------FREHLEPYFV---------PDVYSFN 218
Query: 291 TILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM-EYMRK 349
++ G++D +++ NFG P+ ++N LI + + K ++ E M
Sbjct: 219 ILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLI 278
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
TY ++I + +GD K F++M + G+K + TF LI+G+ G
Sbjct: 279 KGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRS 338
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+ L +V + ++I + ++ + ++++ MK ++ P+ T++++
Sbjct: 339 AMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLIN 398
Query: 470 AYAKE 474
A KE
Sbjct: 399 ALCKE 403
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 176/402 (43%), Gaps = 51/402 (12%)
Query: 107 WVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKV 166
+ N++ ++++ L K+ ++++F+ +K P T+ L+ +L K G+ +A++V
Sbjct: 150 FFNSLIRSYAEAGLFKE---SMKLFQTMKSIAV-SPSVVTFNSLMSILLKRGRTNMAKEV 205
Query: 167 FNEMVEE-GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNC-------------- 211
++EM+ G+ P Y L+ +C+NS++DE F +M++ NC
Sbjct: 206 YDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESF-NCDADVVTYNTLVDGL 264
Query: 212 -----------------------QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP 248
P+V TY+TLI+ E + ++M R + P
Sbjct: 265 CRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKP 324
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW 308
N +T N ++ G +A D+M+ VL M PD +T NTI+ + G +D +
Sbjct: 325 NMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKV 384
Query: 309 YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME-------YMRKLQFPWTSSTYNN 361
+E + F I ++ +++ LI + +K YD + + + K +++YN
Sbjct: 385 FESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNP 444
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+ E+ + G K E Q+ G + D +++ +I G+ G + + +
Sbjct: 445 IFESLCEHGKTKKAERVIRQLMKRGTQ-DPQSYTTVIMGHCKEGAYESGYELLMWMLRRD 503
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
++ Y+ +I ++ D + + ++M + +P + T
Sbjct: 504 FLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTST 545
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 156/367 (42%), Gaps = 19/367 (5%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSG---------QPELARKVFNEMVEEGIEP 177
A + ++ +PF G LL+ + K+ P A + F ++G
Sbjct: 52 AKTIANLINSKPF---SNGLLSSLLITISKTTVLRTLRLIKDPSKALRFFKWTQQKGFSH 108
Query: 178 TPELYTALLAAYCRNSLIDEA--FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
TPE Y +L R ++ A F+ + + + + +++LI++ +A F+
Sbjct: 109 TPESYFIMLEILGRERNLNVARNFLFSIEKHSKGTVKLEDRFFNSLIRSYAEAGLFKESM 168
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
L+Q M +V+P+ VT N ++ K G + + V ML + PD T N ++
Sbjct: 169 KLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIRG 228
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY---GKKRMYDKMSSVMEYMRKLQF 352
F VD R++ + +F D + T+N L+ GK R+ + + M +
Sbjct: 229 FCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLN 288
Query: 353 PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVIS 412
P TY +I + + + E+M + G+K + T+ L+ G A K+
Sbjct: 289 P-NVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKD 347
Query: 413 SV-RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
+ R+ S + + +N +I A +L E +V++ MK+ DS ++S + +
Sbjct: 348 VLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSL 407
Query: 472 AKEGMND 478
++G D
Sbjct: 408 CQKGDYD 414
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 2/162 (1%)
Query: 117 DHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIE 176
D+ + +Q F L E+L + +P +Y + L + G+ + A +V ++++ G +
Sbjct: 412 DYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQ 471
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
P+ YT ++ +C+ + + L M + PD+ Y LI + + L +
Sbjct: 472 D-PQSYTTVIMGHCKEGAYESGYELLMWM-LRRDFLPDIEIYDYLIDGFLQKDKPLLAKE 529
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
+ M + S P T T + VL + G + V+ MLE
Sbjct: 530 TLEKMLKSSYQPKTSTWHSVLAKLLEKGCAHESSCVIVMMLE 571
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 165/374 (44%), Gaps = 20/374 (5%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
NTV F + + AL + ++E+ P + TY ++ K G+ + A KVF+
Sbjct: 149 NTVIAGFCS---RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFD 205
Query: 169 EMVEEG-IEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC-V 226
EM+ +G ++P +Y AL+ YC +D A + ++M V TY+ L+ A +
Sbjct: 206 EMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE-RGVAMTVATYNLLVHALFM 264
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
D E E L ++M + + P+ T NI++ G+ K G + + M + V
Sbjct: 265 DGRGTEAYE-LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGV-RATV 322
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
T ++ + KGQV ++ +++ GI P+ +N LI ++ D+ +M
Sbjct: 323 VTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 382
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M K + TYN ++ +G ++M G++ D T+ LI+GY+ G
Sbjct: 383 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKG- 441
Query: 407 FHKVISSVRLASKLQIAENVSF------YNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
V ++R+ +++ N F YNA+I K + E + K M E PD
Sbjct: 442 --DVKDALRIRNEMM---NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPD 496
Query: 461 SETFSIMTEAYAKE 474
T+ + E E
Sbjct: 497 DSTYISLIEGLTTE 510
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 137/331 (41%), Gaps = 6/331 (1%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
T+ +L L +G+P A ++ +M P Y ++A +C + A + +M
Sbjct: 116 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 171
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS-VTPNTVTQNIVLGGYGKAG 264
+ P+ YTY T+I R + ++ +M + V P V N ++GGY G
Sbjct: 172 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 231
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
D M+E V T N ++ G+ E+ G+ P+ T+
Sbjct: 232 KLDTALLYRDRMVERGVAM-TVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 290
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
NILI + K+ K + E M + T TY +I A S G + + F++
Sbjct: 291 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 350
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
G++ D + LIN ++ +G + + K +IA + YN ++ + E
Sbjct: 351 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 410
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++ M E+ +PD T++ + Y+ +G
Sbjct: 411 ARKLIDEMTERGIQPDLVTYNTLISGYSMKG 441
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 104/240 (43%), Gaps = 1/240 (0%)
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMER 307
PN VT N V+ G+ G ++ M E P+ +T T++S + G+VD +
Sbjct: 143 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 202
Query: 308 WYEKFRNFG-IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+++ G + PE +N LIG Y + D + M + T +TYN ++ A
Sbjct: 203 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 262
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G E+M +G+ D T+ LING+ G K + S+ + V
Sbjct: 263 FMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 322
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
Y A+I A K + E ++++ + RPD ++ + +++ G D+ + + E
Sbjct: 323 VTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 382
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 121/286 (42%), Gaps = 3/286 (1%)
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS-VTPNTVTQNIVLGGY 260
L ++ +P +P+ TY+T+I R + + ++M ER + PN T V+ G+
Sbjct: 134 LELLRQMP--RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGW 191
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G D+ +V ML KP+ N ++ + ++G++D + ++ G+
Sbjct: 192 CKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMT 251
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+N+L+ A + ++E M TYN +I G+ K FE
Sbjct: 252 VATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE 311
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
M G++A T+ LI + G + A + I ++ YNA+I++ +
Sbjct: 312 NMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSG 371
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
++ + M++K PD T++ + G D+ L E
Sbjct: 372 NIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 417
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 117/274 (42%), Gaps = 6/274 (2%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ L G+ A ++ EM +G+ P Y L+ +C+ + +A M
Sbjct: 254 TYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENM 313
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ + V TY+ LI A + + + L+ + R + P+ V N ++ + +G
Sbjct: 314 -SRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 372
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D+ ++ G +E PD T NT++ G+VD + ++ GI P+ T+N
Sbjct: 373 IDRAFEIM-GEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYN 431
Query: 326 ILIGAYG-KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
LI Y K + D + E M K F T TYN +I+ G E ++M
Sbjct: 432 TLISGYSMKGDVKDALRIRNEMMNK-GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 490
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
G+ D T+ LI G + I RLA+
Sbjct: 491 NGITPDDSTYISLIEGLTTED--ERAIDDERLAA 522
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 156/352 (44%), Gaps = 5/352 (1%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
++P + TY ++ K G A ++ + V +G +P Y +L+ +C++ D+A
Sbjct: 396 FEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAM 455
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
+P + Y+TLIK C + ++ L +M E+ P+ T N+++
Sbjct: 456 AVFKD-GLGKGLRPSIIVYNTLIKGLCQQGLILPALQ-LMNEMAEKGCKPDIWTYNLIIN 513
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
G K G ++ + C PD++T NT++ + + ++D + + G+
Sbjct: 514 GLCKMGCLSDANHLIGDAITKG-CIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMT 572
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P+ T+N L+ K +++ + + M + TYN +IE+ +
Sbjct: 573 PDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDL 632
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR-LASKLQIAENVSFYNAVISACI 437
+M ++G+ D +F LI G+ G R + + ++ + YN +ISA
Sbjct: 633 LGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFS 692
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ ++ R++ MK+ C PD+ T+ ++ + + K G ++ Y E ++
Sbjct: 693 EQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIE 744
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/393 (20%), Positives = 159/393 (40%), Gaps = 3/393 (0%)
Query: 83 GYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQP 142
G+ K ++NL ++ E + K + +A+ FE + + P
Sbjct: 130 GFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQEAVDTFERM-DLFNCDP 188
Query: 143 KEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTL 202
+Y ++ +L + G A KV+ M ++ +E YT + ++CR A L
Sbjct: 189 SVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLL 248
Query: 203 NQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGK 262
M L C + Y T++ + + L+ +M E + P+ T N ++ K
Sbjct: 249 RNMPVL-GCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCK 307
Query: 263 AGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETR 322
G + ER+ +L+ C P+++T N + +G +D R G+ P+
Sbjct: 308 KGFVLESERLFDKVLKRGVC-PNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVV 366
Query: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
T+N +I +K + + M F TYN++I+ + G +
Sbjct: 367 TYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDA 426
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
+G K D T+C L+NG+ G + ++ + + ++ YN +I + +
Sbjct: 427 VFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLI 486
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ ++ M EK C+PD T++++ K G
Sbjct: 487 LPALQLMNEMAEKGCKPDIWTYNLIINGLCKMG 519
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 121/332 (36%), Gaps = 38/332 (11%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE-LYTALLAAYCRNSLIDEAFVTLNQ 204
TY +L LG G+ + +EM E +Y + Y R I EA T +
Sbjct: 121 TYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQEAVDTFER 180
Query: 205 MKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG 264
M L NC P VY+Y+ ++ V+ F +Y M ++ V + T I + + + G
Sbjct: 181 MD-LFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTG 239
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
R+L M C + T+++ F G D +++ + P+ TF
Sbjct: 240 RPYAALRLLRNM-PVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTF 298
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
N L + A G E F+++
Sbjct: 299 NKL-----------------------------------VHALCKKGFVLESERLFDKVLK 323
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
G+ + TF I G G + + + S+ + +V YN VI + ++E
Sbjct: 324 RGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVE 383
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
E +M P+ T++ + + Y K+GM
Sbjct: 384 AEECLHKMVNGGFEPNDFTYNSIIDGYCKKGM 415
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 114/277 (41%), Gaps = 51/277 (18%)
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG---YGKAGMF----D 267
++TY ++++ +F +E L +M RS NT+ + + + YG+ G D
Sbjct: 119 LFTYKSMLQKLGFHGKFNEMENLLSEM--RSNLDNTLLEGVYVEAMRFYGRKGKIQEAVD 176
Query: 268 QMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
ER ++ C P V++ N I+++ G + + Y + ++ ++ + T+ I
Sbjct: 177 TFER-----MDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIR 231
Query: 328 IGAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
I ++ + R Y + ++ M L + Y V+ F + GD F++M
Sbjct: 232 IKSFCRTGRPYAALR-LLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLE-- 288
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
CCL +V+ +N ++ A K ++E E
Sbjct: 289 --------CCL-------------------------CPDVTTFNKLVHALCKKGFVLESE 315
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
R++ ++ ++ P+ TF+I + KEG D+ L
Sbjct: 316 RLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRL 352
>gi|356516744|ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 882
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 157/340 (46%), Gaps = 14/340 (4%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
N + + DH + AL F LK QP + TY ++ +LG++ + K+
Sbjct: 357 NQILKQLQDHSV------ALSFFYWLKRQPGFWHDGHTYTTMVGILGRAREFGAINKLLE 410
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
+MV++G +P Y L+ +Y R + + EA NQM+ + C+PD TY TLI A
Sbjct: 411 QMVKDGCQPNVVTYNRLIHSYGRANYLGEALNVFNQMQEM-GCEPDRVTYCTLIDIHAKA 469
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
++ ++Y+ M E ++P+T T ++++ GK+G R+ M++ C P++ T
Sbjct: 470 GFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQG-CVPNIVT 528
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
N ++++ A + Y +N G P+ T++I++ G ++ +V M+
Sbjct: 529 YNILIALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMK 588
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA---EGMKADTKTFCCLINGYANAG 405
+ + Y +I+ + G A ++E +E HA G+ + T L++ +
Sbjct: 589 QNNWVPDEPVYGLLIDLW---GKAGNVEKAWEWYHAMLRAGLLPNVPTCNSLLSAFLRVH 645
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
+ ++ L + ++ Y ++S C +A +M
Sbjct: 646 RLPDAYNLLQNMVTLGLNPSLQTYTLLLSCCTEAQSPYDM 685
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 132/325 (40%), Gaps = 9/325 (2%)
Query: 67 LWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWF- 125
W +G + T++ G + + K LE+ K N V H + +
Sbjct: 382 FWHDGH----TYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYL 437
Query: 126 -QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+AL VF ++E +P TY L+ + K+G ++A ++ M E G+ P Y+
Sbjct: 438 GEALNVFNQMQEMGC-EPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSV 496
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
++ ++ + A +M C P++ TY+ LI A ++ LY+DM
Sbjct: 497 MINCLGKSGNLSAAHRLFCEMVD-QGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNA 555
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
P+ VT +IV+ G G ++ E V M ++ PD ++ ++ G V+
Sbjct: 556 GFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQN-NWVPDEPVYGLLIDLWGKAGNVEK 614
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
WY G+ P T N L+ A+ + ++++ M L + TY ++
Sbjct: 615 AWEWYHAMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLLS 674
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKA 389
++ M + E M G A
Sbjct: 675 CCTEAQSPYDMGFCCELMAVSGHPA 699
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 96/230 (41%), Gaps = 1/230 (0%)
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
T ++G G+A F + ++L M++ C+P+V T N ++ + + + +
Sbjct: 388 TYTTMVGILGRAREFGAINKLLEQMVKDG-CQPNVVTYNRLIHSYGRANYLGEALNVFNQ 446
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
+ G +P+ T+ LI + K D S+ E M+++ + TY+ +I G+
Sbjct: 447 MQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGN 506
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNA 431
F +M +G + T+ LI A A + + R + Y+
Sbjct: 507 LSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNAGFKPDKVTYSI 566
Query: 432 VISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
V+ L E E V+ MK+ + PD + ++ + + K G +K +
Sbjct: 567 VMEVLGYCGYLEEAEAVFFEMKQNNWVPDEPVYGLLIDLWGKAGNVEKAW 616
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 10/200 (5%)
Query: 283 KPDVW----TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
+P W T T++ + + + + E+ G P T+N LI +YG+
Sbjct: 379 QPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLG 438
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+ +V M+++ TY +I+ + G +E+M G+ DT T+ +I
Sbjct: 439 EALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMI 498
Query: 399 NGYANAGLFHKVISSVRLASKL---QIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
N +G + ++ RL ++ N+ YN +I+ KA + ++Y+ M+
Sbjct: 499 NCLGKSG---NLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNA 555
Query: 456 HCRPDSETFSIMTEAYAKEG 475
+PD T+SI+ E G
Sbjct: 556 GFKPDKVTYSIVMEVLGYCG 575
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 74/187 (39%), Gaps = 20/187 (10%)
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKL--QFPWTSST---------------YNNV 362
TR N+ G +R + V+E ++ + Q W +T N +
Sbjct: 300 HTRDLNMPAGIAPTRRHFTNSGHVVEGVKDILKQLRWGPATEKALYNLNFSIDAYQANQI 359
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
++ D A Y ++ G D T+ ++ A F + + K
Sbjct: 360 LKQLQDHSVALSFFYWLKRQ--PGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGC 417
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
NV YN +I + +A+ L E V+ +M+E C PD T+ + + +AK G D +
Sbjct: 418 QPNVVTYNRLIHSYGRANYLGEALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMS 477
Query: 483 LEQEKLQ 489
+ E++Q
Sbjct: 478 M-YERMQ 483
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 174/396 (43%), Gaps = 50/396 (12%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE-GIEPTPELYTA 184
++++VF+ +KE P T+ LL ++ K G+ +A+++F+EM++ G+ P +
Sbjct: 183 ESIKVFKTMKEIGV-SPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNI 241
Query: 185 LLAAYCRNSLIDEAF---------------VTLNQM---------------------KTL 208
L+ +C NS++DE F VT N + K
Sbjct: 242 LIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKS 301
Query: 209 PNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFD 267
PN P+V TY+TLI+ C+ E + +L +M R + PN +T N ++ G +A D
Sbjct: 302 PNLSPNVVTYTTLIRGYCMKQDMAEAL-SLLAEMVSRGLKPNKITYNTLIQGLCEAQKLD 360
Query: 268 QMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
+++ +L GM+ PD T+NT++ G+++ +EK + P++ T+++L
Sbjct: 361 KIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVL 420
Query: 328 IGAYGKK-------RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+ + ++ +D+++ + + + YN + E G K E F
Sbjct: 421 VRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFR 480
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI-KA 439
Q+ G + D ++ LI G+ G + L + + Y +I + K
Sbjct: 481 QLMKRGTQ-DPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKG 539
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
D ++ + + K +K H P + F + A ++G
Sbjct: 540 DPVLAHKSLEKMLKSSHL-PTTAIFHSILAALVEKG 574
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 162/385 (42%), Gaps = 49/385 (12%)
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
G +G + + KVF M E G+ P+ + +LL+ + A ++M PD
Sbjct: 176 GWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPD 235
Query: 215 VYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
YT++ LI+ C+++M E +++M P+ VT N ++ G +AG V+
Sbjct: 236 TYTFNILIRGFCMNSMVDEGF-WFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVV 294
Query: 274 SGML-ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
GM+ +S P+V T T++ + K + + + G+ P T+N LI
Sbjct: 295 KGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLC 354
Query: 333 KKRMYDKMSSVMEYM-RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
+ + DK+ ++E M F + T N +I+A MG + FE+M ++ D+
Sbjct: 355 EAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDS 414
Query: 392 KTFCCLINGYANAGLFHKVISSV-RLASKLQIAEN------VSFYNAVISACIKADDLME 444
T+ L+ G F + LA K + + V+ YN + +
Sbjct: 415 ATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKK 474
Query: 445 MERVYKRMKEK--------------HCR--------------------PDSETFSIMTEA 470
ERV++++ ++ HCR PD+ET+ +M +
Sbjct: 475 AERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDG 534
Query: 471 YAKEGMNDKVYALEQEKLQMLLEAS 495
K+G D V A + L+ +L++S
Sbjct: 535 LLKKG--DPVLA--HKSLEKMLKSS 555
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 119/303 (39%), Gaps = 9/303 (2%)
Query: 133 MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRN 192
M+K+ P P TY L+ A + EMV G++P Y L+ C
Sbjct: 297 MVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEA 356
Query: 193 SLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVT 252
+D+ L M PD T +TLIKA + E ++++ M E V P++ T
Sbjct: 357 QKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSAT 416
Query: 253 QNIVLGGYGKAGMFDQMERVLSGM------LESATCKPDVWTMNTILSVFANKGQVDMME 306
++++ + G F + E + L CKP V N + + G+ E
Sbjct: 417 YSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAE 476
Query: 307 RWYEKFRNFGI-DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
R + + G DP + + LI + ++ + ++ M + F + TY +I+
Sbjct: 477 RVFRQLMKRGTQDPPS--YKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDG 534
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
GD + E+M T F ++ G H+ S V+L + +I +N
Sbjct: 535 LLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQN 594
Query: 426 VSF 428
+
Sbjct: 595 IDL 597
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 114/262 (43%), Gaps = 5/262 (1%)
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
+++LI++ A F+ +++ M E V+P+ VT N +L K G +++ ML
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
++ PD +T N ++ F VD ++++ F DP+ T+N L+ +
Sbjct: 228 DTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKV 287
Query: 338 DKMSSVMEYMRKLQFPWTSS---TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
+V++ M K + P S TY +I + D +M + G+K + T+
Sbjct: 288 KIAHNVVKGMVK-KSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITY 346
Query: 395 CCLINGYANAGLFHKVISSVR-LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
LI G A K+ + + + N +I A L E V+++M
Sbjct: 347 NTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMS 406
Query: 454 EKHCRPDSETFSIMTEAYAKEG 475
E +PDS T+S++ + + G
Sbjct: 407 ELRVQPDSATYSVLVRSLCQRG 428
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 74/168 (44%), Gaps = 4/168 (2%)
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
R FN LI +YG ++ + V + M+++ + T+N+++ G + F++
Sbjct: 166 RFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDE 225
Query: 382 M-HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
M G+ DT TF LI G+ + + + S+ + +V YN ++ +A
Sbjct: 226 MLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAG 285
Query: 441 DLMEMERVYKRM--KEKHCRPDSETFSIMTEAYA-KEGMNDKVYALEQ 485
+ V K M K + P+ T++ + Y K+ M + + L +
Sbjct: 286 KVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAE 333
>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 566
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 147/358 (41%), Gaps = 43/358 (12%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A+ +FE + Y P ++ ++ + K G + A ++ M E G P + L+
Sbjct: 217 AVALFEGWIQGGVYSPDVWSFNVVIKGVCKVGDVQKALELVERMDEFGCSPDTVTHNILV 276
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
CR + + L +++ C P+V TY+++I A R E +Y DM
Sbjct: 277 NGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGT 336
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
+PN VT N+++ GYGKAG V M+ C PDV T ++++ + GQ+D
Sbjct: 337 SPNVVTYNVLINGYGKAGNMGSAVAVYQQMILR-RCLPDVVTFSSLIDGYCRCGQLDDAM 395
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ----FPWTSSTYNNV 362
+ + + + I P TF I+I + K+ ++ + +++K+ + YN V
Sbjct: 396 KIWTEMAQYHIQPNAHTFCIIIHTFCKQ---NRSGEALHFLKKMNMRTDIAPQAFIYNPV 452
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I+ G +M +G + D T+ LI G+ G +I
Sbjct: 453 IDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKG---------------RI 497
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
AE V+F++ +M E C PDS + K GM +V
Sbjct: 498 AEAVTFFH--------------------KMVETGCSPDSIVVNSFISCLLKSGMPGEV 535
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 121/304 (39%), Gaps = 7/304 (2%)
Query: 175 IEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELI 234
+ P+ Y +++ C++ +A +QM P+ S L +C A +
Sbjct: 123 MPPSAHSYRYVISLMCQSGRHTDALQLFDQMTDQSGYFPNARFLSFLSGSCAAAGLLDAA 182
Query: 235 ETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILS 294
L + + N ++ + G + G ++ PDVW+ N ++
Sbjct: 183 AALLSKASQFGCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIK 242
Query: 295 VFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 354
G V E+ FG P+T T NIL+ + + ++S E +R+LQ
Sbjct: 243 GVCKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAK---EVSKGREVLRRLQRDG 299
Query: 355 TS----STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
TY +VI + G + + M A G + T+ LINGY AG
Sbjct: 300 VCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSA 359
Query: 411 ISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
++ + + +V ++++I + L + +++ M + H +P++ TF I+
Sbjct: 360 VAVYQQMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHT 419
Query: 471 YAKE 474
+ K+
Sbjct: 420 FCKQ 423
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 86/213 (40%), Gaps = 1/213 (0%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K+ + +V L+ P TY ++ K+G+ E A V+N+MV G P
Sbjct: 283 KEVSKGREVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVT 342
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y L+ Y + + A QM L C PDV T+S+LI + + ++ +M
Sbjct: 343 YNVLINGYGKAGNMGSAVAVYQQM-ILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEM 401
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ + PN T I++ + K + L M P + N ++ V G+
Sbjct: 402 AQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGK 461
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
VD + G P+ T+ ILI + K
Sbjct: 462 VDEANMILIEMEEKGCRPDKYTYTILIIGHCMK 494
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL + + + P+ Y ++ +L K G+ + A + EM E+G P YT L
Sbjct: 428 EALHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTIL 487
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
+ +C I EA ++M C PD ++ I
Sbjct: 488 IIGHCMKGRIAEAVTFFHKMVET-GCSPDSIVVNSFISC 525
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 140/341 (41%), Gaps = 37/341 (10%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ L K G+ E A ++ M+ G +P + L+ YCR + A L++M
Sbjct: 281 TYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM 340
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ N P +Y +I L L + M + PN V + ++ GY G
Sbjct: 341 EK-RNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGR 399
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
++ R+L GM S PD++ N I+S + G+++ + + + G+ P+ TF
Sbjct: 400 IEEARRLLDGMSCSGV-APDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFG 458
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
I Y K KM+ +Y F++M
Sbjct: 459 AFILGYSKT---GKMTEAAKY--------------------------------FDEMLDH 483
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G+ + + LING+ AG + +S R L + +V +A I +K + E
Sbjct: 484 GLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEA 543
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+V+ +KEK PD T+S + + K+G +K + L E
Sbjct: 544 LKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDE 584
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 156/355 (43%), Gaps = 27/355 (7%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P T+ ++ K+G+ A K F+EM++ G+ P LYT L+ + + + EA
Sbjct: 451 KPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALS 510
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ L PDV T S I + R + ++ ++ E+ + P+ T + ++ G+
Sbjct: 511 IFRHLHAL-GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGF 569
Query: 261 GKAGMFDQM-----ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
K G ++ E L G+ P+++ N ++ G + + ++
Sbjct: 570 CKQGEVEKAFELHDEMCLKGI------APNIFIYNALVDGLCKSGDIQRARKLFDGMPEK 623
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G++P++ T++ +I Y K + S+ M S YN ++ GD +
Sbjct: 624 GLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKA 683
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISSVRLASKLQIAENVSF 428
F +M +G A T +F LI+GY + LF ++I+ QI +
Sbjct: 684 MNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAK-------QIMPDHVT 735
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
Y VI KA + E ++K M+E++ D+ T++ + Y K G + +V+AL
Sbjct: 736 YTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFAL 790
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 150/358 (41%), Gaps = 26/358 (7%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H +AL +F L P T + L K+G+ + A KVF+E+ E+G+ P
Sbjct: 499 HFKAGNLMEALSIFRHLHALGVL-PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVP 557
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
Y++L++ +C+ +++AF ++M L P+++ Y+ L+ + + L
Sbjct: 558 DVFTYSSLISGFCKQGEVEKAFELHDEM-CLKGIAPNIFIYNALVDGLCKSGDIQRARKL 616
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
+ M E+ + P++VT + ++ GY K+ + + M S +P + N ++
Sbjct: 617 FDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM-PSKGVQPHSFVYNALVHGCC 675
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+G ++ + + G T +FN LI Y K + S + + M Q
Sbjct: 676 KEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHV 734
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
TY VI+ G + F++M + DT T+ L+ GY G
Sbjct: 735 TYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLG------------ 782
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS--ETFSIMTEAYAK 473
Q +E + + +++ +K D E Y + HC+ D+ E F + E K
Sbjct: 783 ---QSSEVFALFEKMVAKGVKPD-----EVTYGLVIYAHCKEDNLVEAFKLRDEVVGK 832
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 145/340 (42%), Gaps = 17/340 (5%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P Y L++ G+ E AR++ + M G+ P Y A+++ + ++EA
Sbjct: 381 KPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 440
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +++ +PD T+ I + + +M + + PN +++ G+
Sbjct: 441 YLLEIQG-RGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 499
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
KAG + + L + PDV T + + G+V + + + + G+ P+
Sbjct: 500 FKAGNLMEALSIFR-HLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 558
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T++ LI + K+ +K + + M YN +++ GD + F+
Sbjct: 559 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 618
Query: 381 QMHAEGMKADTKTFCCLINGYANA-------GLFHKVISSVRLASKLQIAENVSFYNAVI 433
M +G++ D+ T+ +I+GY + LFH++ S + + YNA++
Sbjct: 619 GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSK-------GVQPHSFVYNALV 671
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
C K D+ + +++ M +K + +F+ + + Y K
Sbjct: 672 HGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCK 710
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 120/306 (39%), Gaps = 37/306 (12%)
Query: 170 MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM 229
M E+G+ P YT + A CR ++EA +T +M+ +PD S LI +
Sbjct: 200 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQK-TGLKPDYNACSALIDGFMREG 258
Query: 230 RFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM 289
+ + + M + N +T N+++ G K G ++ +L GM+
Sbjct: 259 DIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMI------------ 306
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
G P +RTF +LI Y ++ + +++ M K
Sbjct: 307 ------------------------TLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEK 342
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
++ +Y +I D E+M G+K + + LI GYA+ G +
Sbjct: 343 RNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEE 402
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+ S +A ++ YNA+IS KA + E ++ + +PD+ TF
Sbjct: 403 ARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFIL 462
Query: 470 AYAKEG 475
Y+K G
Sbjct: 463 GYSKTG 468
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 128/279 (45%), Gaps = 9/279 (3%)
Query: 129 QVFEMLKEQP--FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+ F + E P QP Y L+ K G E A +F EM+++G T + L+
Sbjct: 647 EAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNTLI 705
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
YC++ I EA +M PD TY+T+I A + E L+++M ER++
Sbjct: 706 DGYCKSCKIQEASQLFQEM-IAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNL 764
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
+TVT ++ GY K G ++ + M+ KPD T L ++A+ + +++E
Sbjct: 765 IVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGV-KPDEVTYG--LVIYAHCKEDNLVE 821
Query: 307 --RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ ++ G+ + ++LI A K+ + S +++ M +L + + + ++
Sbjct: 822 AFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVR 881
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+F + G FE + + G+ DT T L+NG N
Sbjct: 882 SFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLN 920
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 143/334 (42%), Gaps = 3/334 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P Y ++ L K+G+ E A E+ G++P + A + Y + + EA
Sbjct: 417 PDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKY 476
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
++M P+ Y+ LI A ++++ + V P+ T + + G
Sbjct: 477 FDEMLD-HGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLL 535
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G + +V S + E PDV+T ++++S F +G+V+ +++ GI P
Sbjct: 536 KNGRVQEALKVFSELKEKGLV-PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 594
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+N L+ K + + + M + S TY+ +I+ + + F +
Sbjct: 595 FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 654
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M ++G++ + + L++G G K ++ R + A +SF N +I K+
Sbjct: 655 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSF-NTLIDGYCKSCK 713
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ E ++++ M K PD T++ + + + K G
Sbjct: 714 IQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAG 747
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 96/242 (39%), Gaps = 17/242 (7%)
Query: 251 VTQNIVLGGYGKAGMFDQMERVL------SGMLESATCK-----------PDVWTMNTIL 293
V +I++ Y + GM D+ V S ++ C P+ +T I
Sbjct: 157 VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIIT 216
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
+ +++ + +E+ + G+ P+ + LI + ++ D++ + + M P
Sbjct: 217 AGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIP 276
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
TYN +I G + + M G K +++TFC LI GY + +
Sbjct: 277 INLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALEL 336
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ K + + Y A+I+ DL ++ ++M +P+ +S + YA
Sbjct: 337 LDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYAS 396
Query: 474 EG 475
EG
Sbjct: 397 EG 398
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 111/474 (23%), Positives = 198/474 (41%), Gaps = 21/474 (4%)
Query: 22 PHPHDTKTNKHRAQVPNFNLIHCSVTSTNKHTSFSSESAVAAKKRLWKEGEYPGVSETSI 81
PH NK + NL+ C+ T N + S S++ +++ K+ GV +
Sbjct: 156 PHLATQIFNKMKRLNYRPNLLTCN-TLMNSLVRYPSSSSILLARQVLKDSIKLGV----V 210
Query: 82 PGYRSKRTPIKNLKKKLERKAK-AKAWVNTVAE-----------TFSDHVLKKQWFQALQ 129
P S I LE K K A WVN ++E T D +LK++ Q +
Sbjct: 211 PNTNSFNILIYGYC--LESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEAR 268
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
+ + P + TY L+ + G + A KV M + PT Y L+ +
Sbjct: 269 DLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGF 328
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
C + IDEAF ++M+ + N PDV TY+TLI C + +L ++MD++ V N
Sbjct: 329 CNDGKIDEAFRIRDEMEKM-NVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCN 387
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
VT NI+L K G + L M E+ PD T NT++ + G++ R
Sbjct: 388 AVTYNIILKWMCKKGNMTEATTTLDKMEENGL-SPDCVTYNTLIGAYCKAGKMGKAFRMM 446
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
++ + G+ +T T N ++ ++ D+ +++ K + +Y +I +
Sbjct: 447 DEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKD 506
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFY 429
+++M + T T+ +I G + + I + + + + + Y
Sbjct: 507 EKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTY 566
Query: 430 NAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
N +I ++ + + + M E +PD T +I+ +EGM +K L
Sbjct: 567 NIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKL 620
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/440 (21%), Positives = 171/440 (38%), Gaps = 76/440 (17%)
Query: 127 ALQVFEMLKEQPFYQPKE---GTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
A Q+F +K Y+P T M LV S LAR+V + ++ G+ P +
Sbjct: 159 ATQIFNKMKRLN-YRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFN 217
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
L+ YC S + +A +N+M C PD +Y+T++ A + + L DM
Sbjct: 218 ILIYGYCLESKVKDALDWVNKMSEF-GCVPDTVSYNTILDALLKRRLLQEARDLLLDMKS 276
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+ ++PN T N+++ GY + G+ + +V+ M + P VWT N +++ F N G++D
Sbjct: 277 KGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLL-PTVWTYNMLVNGFCNDGKID 335
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK-----------LQF 352
R ++ + P+ T+N LI + R ++ S++E M K +
Sbjct: 336 EAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIIL 395
Query: 353 PWTSS------------------------TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
W TYN +I A+ G ++M ++G+K
Sbjct: 396 KWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLK 455
Query: 389 ADTKT-----------------------------------FCCLINGYANAGLFHKVISS 413
DT T + LI GY + ++
Sbjct: 456 IDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNL 515
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ QI + YN+VI ++ + + M E PD T++I+ +
Sbjct: 516 WDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCL 575
Query: 474 EGMNDKVYALEQEKLQMLLE 493
EG +K + E ++ L +
Sbjct: 576 EGNVEKAFQFHNEMIENLFK 595
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 137/315 (43%), Gaps = 7/315 (2%)
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV---DAMRFE 232
EP+ EL + AY + A N+MK L N +P++ T +TL+ + V +
Sbjct: 137 EPSKELLDTSIGAYVQMDQPHLATQIFNKMKRL-NYRPNLLTCNTLMNSLVRYPSSSSIL 195
Query: 233 LIETLYQDMDERSVTPNTVTQNIVLGGYG-KAGMFDQMERVLSGMLESATCKPDVWTMNT 291
L + +D + V PNT + NI++ GY ++ + D ++ V + C PD + NT
Sbjct: 196 LARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWV--NKMSEFGCVPDTVSYNT 253
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
IL + + ++ G+ P T+N+L+ Y + + + + V+E M +
Sbjct: 254 ILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNN 313
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
T TYN ++ F + G ++M + D T+ LI+G + +V
Sbjct: 314 LLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVY 373
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
S + K + N YN ++ K ++ E +M+E PD T++ + AY
Sbjct: 374 SLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAY 433
Query: 472 AKEGMNDKVYALEQE 486
K G K + + E
Sbjct: 434 CKAGKMGKAFRMMDE 448
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 132/339 (38%), Gaps = 72/339 (21%)
Query: 123 QWFQALQVFEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
QW + +V+ +++E + + TY +L + K G A ++M E G+ P
Sbjct: 365 QWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCV 424
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA--------------CV 226
Y L+ AYC+ + +AF +++M T + D +T +T++ C
Sbjct: 425 TYNTLIGAYCKAGKMGKAFRMMDEM-TSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCS 483
Query: 227 DAMRFELIE---------------------TLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ R +++ L+ +M ER + P+T+T N V+GG ++
Sbjct: 484 ASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRK 543
Query: 266 FDQMERVLSGMLESATC----------------------------------KPDVWTMNT 291
DQ L+ MLE+ KPDV+T N
Sbjct: 544 VDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNI 603
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
+L +G ++ + + + G D + T+N +I + K+ ++ ++ M +
Sbjct: 604 LLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKK 663
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
TY +I A +D G K E +M G+ D
Sbjct: 664 LGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHD 702
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Query: 139 FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA 198
++P T LL L + G E A K+FN +V +G + Y ++++ C+ + A
Sbjct: 593 LFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENA 652
Query: 199 FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
+ L +M+ PD YTY +I A DA R + E M E + + QN+ LG
Sbjct: 653 YDLLTEMEA-KKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHD---QNLKLG 708
>gi|302819015|ref|XP_002991179.1| hypothetical protein SELMODRAFT_448320 [Selaginella moellendorffii]
gi|300141007|gb|EFJ07723.1| hypothetical protein SELMODRAFT_448320 [Selaginella moellendorffii]
Length = 561
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 159/385 (41%), Gaps = 35/385 (9%)
Query: 110 TVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNE 169
+V T + + W ++ E L EQ +Y + Y +L+ K GQ + +F
Sbjct: 120 SVVGTLTRFKQMQAWKIIIKFTEWLMEQGWYNFNQKDYFLVLLAYCKDGQVDKTEGIFQR 179
Query: 170 MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM 229
M E G+ E+YT + Y R D+A ++ T P TY T++K+ +A
Sbjct: 180 MAELGVAANIEMYTLQIEGYGRRRSFDKAEAVFQRLLTT-GPSPTAQTYQTMMKSYSEAG 238
Query: 230 RFELIETLYQ---DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM---------- 276
R + ++ +++ D +V P+ N+++ YGK G +Q V M
Sbjct: 239 RLDDVQRIFKLVTDSPSPTVKPDARMYNLMIHTYGKQGKVEQAMSVYQSMKRERVALTIV 298
Query: 277 ---------------------LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
L++A PDV++ +++ +A + + ++
Sbjct: 299 TFNSLLACQKTWKDAEDVFRKLQAAKLDPDVFSYTALVNAYAKARRAECAHAAFDDMIAA 358
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
GI P +N LI AY K + + +V++ M++ T +Y ++I A+ +
Sbjct: 359 GIRPTQVAYNALINAYAKCKDPEGARAVLKQMKQNGCTPTVESYTSLISAYVSVNLMAKA 418
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
E T +M ++ + +TFC L+ GYAN ++ S + N Y +++A
Sbjct: 419 EQTVLRMKEADLQPNLQTFCILMTGYANGNKLDNMMRSFETMKLAGLEPNRHVYTVLVNA 478
Query: 436 CIKADDLMEMERVYKRMKEKHCRPD 460
DD YK+M C+PD
Sbjct: 479 YGSNDDFDSAIIWYKQMLGTGCKPD 503
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 91/185 (49%), Gaps = 6/185 (3%)
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
+L + GQVD E +++ G+ + + I YG++R +DK +V + +
Sbjct: 160 VLLAYCKDGQVDKTEGIFQRMAELGVAANIEMYTLQIEGYGRRRSFDKAEAVFQRLLTTG 219
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH---AEGMKADTKTFCCLINGYANAGLFH 408
T+ TY +++++S+ G ++ F+ + + +K D + + +I+ Y G
Sbjct: 220 PSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARMYNLMIHTYGKQGKVE 279
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ +S + + ++A + +N+++ AC K + E V+++++ PD +++ +
Sbjct: 280 QAMSVYQSMKRERVALTIVTFNSLL-ACQKT--WKDAEDVFRKLQAAKLDPDVFSYTALV 336
Query: 469 EAYAK 473
AYAK
Sbjct: 337 NAYAK 341
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 2/163 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P + Y L+ K PE AR V +M + G PT E YT+L++AY +L+ +A
Sbjct: 361 RPTQVAYNALINAYAKCKDPEGARAVLKQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQ 420
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
T+ +MK + QP++ T+ L+ + + + + ++ M + PN +++ Y
Sbjct: 421 TVLRMKE-ADLQPNLQTFCILMTGYANGNKLDNMMRSFETMKLAGLEPNRHVYTVLVNAY 479
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
G FD ML + CKPD +L + + Q +
Sbjct: 480 GSNDDFDSAIIWYKQMLGTG-CKPDPILRTVLLKIAKSHEQTE 521
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 26/130 (20%), Positives = 58/130 (44%), Gaps = 3/130 (2%)
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
Y V+ A+ G E F++M G+ A+ + + I GY F K + +
Sbjct: 157 YFLVLLAYCKDGQVDKTEGIFQRMAELGVAANIEMYTLQIEGYGRRRSFDKAEAVFQRLL 216
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK---HCRPDSETFSIMTEAYAKEG 475
+ Y ++ + +A L +++R++K + + +PD+ +++M Y K+G
Sbjct: 217 TTGPSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARMYNLMIHTYGKQG 276
Query: 476 MNDKVYALEQ 485
++ ++ Q
Sbjct: 277 KVEQAMSVYQ 286
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 154/339 (45%), Gaps = 7/339 (2%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y P T+ LL + A + MV+ G EP +Y L+ C+N ++ A
Sbjct: 131 YDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIAL 190
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
LN+M+ D+ TY+TL+ + + + +DM +R + P+ T ++
Sbjct: 191 ELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDA 250
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ K G D+ + + ML+S+ P+ T N++++ G++ ++ ++ + G P
Sbjct: 251 FVKQGNLDEAQELYKQMLQSSI-GPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFP 309
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
T+N LI + K R + + + M + + TYN +I + +G + + F
Sbjct: 310 NVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIF 369
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE---NVSFYNAVISAC 436
M + G+ D T C L++G G ++ S++ + ++ E + YN +I
Sbjct: 370 SWMVSCGVTPDIITHCILLHGLCVNG---EIGSAMVKFNDMRSGEKYLGIVAYNIMIHGL 426
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
KAD + E ++ R+ + +PD+ T++IM K G
Sbjct: 427 CKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNG 465
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 157/362 (43%), Gaps = 18/362 (4%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
EML+ +P P + ++L + K + ++ +F++M GI +T L+ +CR
Sbjct: 605 EMLQSRPI--PSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCR 662
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
S A L +M L QP + T +L+ RF+ +L M E + PN V
Sbjct: 663 CSRFSLALALLGKMMKL-GFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVV 721
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
N V+ G K + + GM E D T NT++S N G+ R
Sbjct: 722 IYNTVINGLCKNRDLNNALEIFYGM-EKKGIVADAVTYNTLISGLCNSGRWTDAARLLRD 780
Query: 312 FRNFGIDPETRTFNILIGAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF---S 367
IDP F LI + K+ + + + E +R+ P TYN++I F
Sbjct: 781 MVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHP-NILTYNSLINGFCIQG 839
Query: 368 DMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAE 424
+GDAKHM F+ M ++G D T+ LI G+ + +V ++L ++ +
Sbjct: 840 RLGDAKHM---FDLMVSKGCFPDVVTYNTLITGFCKS---KRVEDGMKLFCEMTHQGLVG 893
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
+ YN +I +A L ++V+ RM + PD T++I+ + G +K +
Sbjct: 894 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMV 953
Query: 485 QE 486
++
Sbjct: 954 ED 955
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 141/331 (42%), Gaps = 23/331 (6%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
AL++F ++++ TY L+ L SG+ A ++ +MV+ I+P +TAL
Sbjct: 738 NALEIFYGMEKKGIVADAV-TYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTAL 796
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + + + EA +M + P++ TY++LI R + ++ M +
Sbjct: 797 IDTFVKEGNLLEAKNLYKEM-IRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKG 855
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ VT N ++ G+ K+ + ++ M D +T NT++ + G++++
Sbjct: 856 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLV-GDAFTYNTLIHGYCQAGKLNVA 914
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++ + + + G+ P+ T+NIL+ +K ++E ++K Q TYN +I+
Sbjct: 915 QKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQG 974
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
K F + +G+K D + +I+G GL R A KL
Sbjct: 975 MCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGL-------RREADKLCTR-- 1025
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKH 456
+K D M ER+Y H
Sbjct: 1026 -----------MKEDGFMPSERIYDETLRDH 1045
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 152/378 (40%), Gaps = 10/378 (2%)
Query: 102 AKAKAWVNTVAETFSDHVLKKQWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQP 160
A A+A+ + + + ++ AL +F EM++ QP P + +LL + +
Sbjct: 24 ASARAYSGYREKLRTGFLHSIRFEDALDLFLEMVQSQPL--PSVVDFTRLLTAIANLRRY 81
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
E +M GI +T L+ +CR S + A L +M L P + T+ +
Sbjct: 82 ETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGY-DPSIVTFGS 140
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
L+ R +L M + PN V N ++ K G + +L+ M +
Sbjct: 141 LLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKG 200
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
D+ T NT+L+ G+ R I+P+ TF LI A+ K+ D+
Sbjct: 201 RLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEA 260
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+ + M + + TYN++I G H + TF+ M ++G + T+ LING
Sbjct: 261 QELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLING 320
Query: 401 YANAGLFHKVISSVRLASKL---QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
+ + +V ++L ++ + + YN +I + L + ++ M
Sbjct: 321 FCKS---RRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGV 377
Query: 458 RPDSETFSIMTEAYAKEG 475
PD T I+ G
Sbjct: 378 TPDIITHCILLHGLCVNG 395
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 109/258 (42%), Gaps = 1/258 (0%)
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y +++ + ++F+ L+ +M + P+ V VL K FD + + M
Sbjct: 583 YRERLRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKM- 641
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
E+ D+++ ++ F + + K G P T L+ + + +
Sbjct: 642 ENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRF 701
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
+ S+++ M +L YN VI D + F M +G+ AD T+ L
Sbjct: 702 QEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTL 761
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
I+G N+G + +R K +I NV F+ A+I +K +L+E + +YK M +
Sbjct: 762 ISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSV 821
Query: 458 RPDSETFSIMTEAYAKEG 475
P+ T++ + + +G
Sbjct: 822 HPNILTYNSLINGFCIQG 839
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 95/208 (45%), Gaps = 3/208 (1%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P V +L+ AN + + + + ++ FGI + +F ILI + + S+
Sbjct: 63 PSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSI 122
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF-EQMHAEGMKADTKTFCCLINGYA 402
+ M KL + + T+ +++ F + + H ++ M G + + + LI+
Sbjct: 123 LGKMMKLGYDPSIVTFGSLLHGFC-LRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLC 181
Query: 403 NAGLFHKVISSVR-LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
G + + + + K ++A ++ YN +++ + + + R+ + M ++ PD
Sbjct: 182 KNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDV 241
Query: 462 ETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
TF+ + +A+ K+G D+ L ++ LQ
Sbjct: 242 FTFTALIDAFVKQGNLDEAQELYKQMLQ 269
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 160/375 (42%), Gaps = 2/375 (0%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
N T D + KK + M + P TY L+ K G + A V
Sbjct: 243 NVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIE 302
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
M + + P Y L+ C I+EAF ++M+ L PDV +Y+TLI C++
Sbjct: 303 LMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENL-KLLPDVVSYNTLINGCLEW 361
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
+ L ++M E+ V PN VT NI++ Y K G D ++ M ES PD T
Sbjct: 362 SKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGF-SPDCVT 420
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
NT+++ + G + R ++ + ++ T N ++ +++ ++ ++ R
Sbjct: 421 YNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSAR 480
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
K + +Y +I + G+ +++M + + T T+ C+I G G
Sbjct: 481 KRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTE 540
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ IS + + + + + YN ++ + D+ + + + +M E +PD T +I+
Sbjct: 541 QAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILL 600
Query: 469 EAYAKEGMNDKVYAL 483
EGM +K L
Sbjct: 601 RGLCMEGMLEKALKL 615
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 103/465 (22%), Positives = 174/465 (37%), Gaps = 79/465 (16%)
Query: 98 LERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKE---GTYMKLLVLL 154
L + +KA ++T +V Q A Q+F+ +K +P T + LV
Sbjct: 128 LRLTSPSKALLDTA---IGAYVQSGQPHHAFQIFKKMKRLRL-RPNLLTCNTLLNSLVRY 183
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
S +R+ FN+ ++ GI P + ++ YC + +A LN M NC PD
Sbjct: 184 PSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKY-NCSPD 242
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
TY+T++ A R L DM R + PN T NI++ GY K G + V+
Sbjct: 243 NVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIE 302
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQV-------DMME--------------------- 306
M ++ PDVWT N +++ N+G++ D ME
Sbjct: 303 LMTQNNLL-PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEW 361
Query: 307 -------RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
+ E+ G+ P T NI++ Y K+ D S+ + M + F TY
Sbjct: 362 SKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTY 421
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT-------KTFC----------------- 395
N +I + G+ T ++M + MK D+ +T C
Sbjct: 422 NTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARK 481
Query: 396 -----------CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
LI GY G + + + +I + YN +I + +
Sbjct: 482 RGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQ 541
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ E PD T++ + Y +EG +K + + ++
Sbjct: 542 AISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVE 586
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 142/373 (38%), Gaps = 72/373 (19%)
Query: 123 QWFQALQVFEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+W + + F++L+E + +P T+ ++ K G+ + A +M E G P
Sbjct: 360 EWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCV 419
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQM-----------------------------KTLPNC 211
Y L+ YC+ + EAF T+++M K L +
Sbjct: 420 TYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSA 479
Query: 212 QP-----DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
+ D +Y TLI + L+ +M E+ + P+TVT N ++GG + G
Sbjct: 480 RKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKT 539
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
+Q L+ +LES PD T NTIL + +G V+ +++ K P+ T NI
Sbjct: 540 EQAISKLNELLESGLL-PDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNI 598
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
L+ M ++E KL W S +G
Sbjct: 599 LLRGLC-------MEGMLEKALKLFNTWVS----------------------------KG 623
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
DT T+ LI G + + + ++ + YNA+I+A + + E E
Sbjct: 624 KAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAE 683
Query: 447 RVYKRMKEKHCRP 459
+M EK P
Sbjct: 684 EFMSKMLEKGXLP 696
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 2/128 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A Q + E F +P T LL L G E A K+FN V +G Y L
Sbjct: 576 KAFQFHNKMVENSF-KPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTL 634
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + C+ +D+AF L++M+ PD YTY+ +I A D+ R E M E+
Sbjct: 635 ITSLCKEGRLDDAFNLLSEMEE-KELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKG 693
Query: 246 VTPNTVTQ 253
P V Q
Sbjct: 694 XLPXQVLQ 701
>gi|326508346|dbj|BAJ99440.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 819
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 165/358 (46%), Gaps = 16/358 (4%)
Query: 157 SGQPELARKVFNEMV-EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
SG E A VF M +E ++Y ++ + R++ +D+A +M+ C+PD
Sbjct: 130 SGSLEHAVYVFCWMKNQENYCARNDIYGMMIQLHARHNQVDQARGLFFEMQEW-RCKPDA 188
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
Y++LI A A + + DM ++ P+ T N V+ G AG + + +
Sbjct: 189 DIYNSLINAHARAGLWRWAINIMDDMLRAAIPPSRATYNNVVNACGAAGNWKKALELCKK 248
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
M+ + PD+ T N +LS F N Q ++E + I P+T T NI+I K
Sbjct: 249 MIRNGV-GPDLVTHNIVLSAFKNGFQYTKATGYFEMMKGANIAPDTFTLNIVIHCLVKVG 307
Query: 336 MYDKMSSVMEYMR--KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+ ++ MR ++Q TY ++I ++ G ++ + F+ M AEG+K + +
Sbjct: 308 QHGDAVDLLNSMREKRVQCSPDVVTYTSIIHSYYVCGQVENCKAVFDMMVAEGVKPNIVS 367
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+ L+ YA+ G+ + +L + + +V Y +++A ++ + V+ M+
Sbjct: 368 YNALLGAYASHGMHTEAFGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMR 427
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDKVYAL--EQEK---------LQMLLEASGHWQQ 500
+ C+P+ +++ + +AY GM + +L E EK + LL A G +Q
Sbjct: 428 KNSCKPNKVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLAACGRCRQ 485
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 173/397 (43%), Gaps = 10/397 (2%)
Query: 94 LKKKLERKAKAKAWV--NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLL 151
L KK+ R V N V F + Q+ +A FEM+K P T ++
Sbjct: 245 LCKKMIRNGVGPDLVTHNIVLSAFKNGF---QYTKATGYFEMMKGANI-APDTFTLNIVI 300
Query: 152 VLLGKSGQPELARKVFNEMVEEGIEPTPEL--YTALLAAYCRNSLIDEAFVTLNQMKTLP 209
L K GQ A + N M E+ ++ +P++ YT+++ +Y ++ + M
Sbjct: 301 HCLVKVGQHGDAVDLLNSMREKRVQCSPDVVTYTSIIHSYYVCGQVENCKAVFDMM-VAE 359
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+P++ +Y+ L+ A +++ + + + P+ V+ +L YG++ ++
Sbjct: 360 GVKPNIVSYNALLGAYASHGMHTEAFGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKA 419
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
V + M ++ +CKP+ + N ++ + + G + GI P+ + + L+
Sbjct: 420 REVFNEMRKN-SCKPNKVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLA 478
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
A G+ R K+ +V+E + YN+ I ++ GD + + M A +
Sbjct: 479 ACGRCRQTTKIDTVLEAAKFRGIELNIVAYNSGIGSYLSFGDYEKALKLYATMMASNVNP 538
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
D T+ LI+G G + + + L+I Y+++I + +K D L E E +
Sbjct: 539 DAVTYNILISGLCKLGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQDKLAEAESTF 598
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
MK C PD T++ M +AY G V+ L +E
Sbjct: 599 INMKASGCFPDVLTYTAMIQAYTDHGSWTSVWDLFKE 635
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 4/136 (2%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
P TY L+ L K G+ + K F +MV+ I T E+Y++L+ +Y + + EA
Sbjct: 537 NPDAVTYNILISGLCKLGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQDKLAEAES 596
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
T MK C PDV TY+ +I+A D + + L+++M+ ++ P+ + + ++
Sbjct: 597 TFINMKA-SGCFPDVLTYTAMIQAYTDHGSWTSVWDLFKEMEGNAILPDAIICSSLMEAL 655
Query: 261 GKAGMFDQMERVLSGM 276
K +Q RVL M
Sbjct: 656 NKG---NQYGRVLQLM 668
>gi|359477372|ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
[Vitis vinifera]
Length = 881
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 178/420 (42%), Gaps = 40/420 (9%)
Query: 81 IPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQ--WFQALQVFEMLKEQP 138
IP +K+L + L W +++ +LK+Q W +AL++FE LK++
Sbjct: 137 IPSILRALETVKDLDEALS------PWEESLSNKERSIILKEQSCWERALEIFEWLKKKG 190
Query: 139 FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA 198
Y+ Y +L +LGK+ + +++EM+ GI P Y L+ Y + L +EA
Sbjct: 191 CYELNVIHYNIMLRILGKARKWHHVESLWDEMMSRGITPVNSTYGTLIDVYSKGGLTEEA 250
Query: 199 FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM-------DERSVTPNTV 251
L++M +PD T +++ A F+ E +++ DE + T
Sbjct: 251 LHWLDRMNK-QGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLGKTLKDEGKTSEPTA 309
Query: 252 TQ-----------------NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILS 294
T N ++ YGKAG + + ML P+ T NT++
Sbjct: 310 TSAVESASQPHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLREGII-PNTVTFNTMIH 368
Query: 295 VFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 354
+ N GQ++ +K P+TRT+NILI + K D+ +S + M++ +
Sbjct: 369 ICGNHGQLEEAASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMKEARLEP 428
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
+Y ++ AFS E +M G++ D T L Y AG+ K
Sbjct: 429 DLVSYRTLLYAFSIRHLVGEAEILVSEMDERGLEIDEFTQSALTRMYIEAGMLKKSWLWF 488
Query: 415 RLASKLQIAENVS--FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
R + + N+S Y+A I A + ++E E+ + KE + F++M +AY
Sbjct: 489 R---RFHLEGNMSSECYSANIDAYGERGHILEAEKAFLCCKESR-KLSVLEFNVMIKAYG 544
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 160/401 (39%), Gaps = 39/401 (9%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
NT+ +T+ Q +A F ML+E P T+ ++ + G GQ E A +
Sbjct: 329 NTLIDTYGK---AGQLREASDTFAWMLREGII--PNTVTFNTMIHICGNHGQLEEAASLM 383
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
+M E P Y L++ + +++ ID A +MK +PD+ +Y TL+ A
Sbjct: 384 QKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMKE-ARLEPDLVSYRTLLYAFSI 442
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ---------MERVLSGMLE 278
E L +MDER + + TQ+ + Y +AGM + +E +S
Sbjct: 443 RHLVGEAEILVSEMDERGLEIDEFTQSALTRMYIEAGMLKKSWLWFRRFHLEGNMSSECY 502
Query: 279 SAT-------------------CKPD----VWTMNTILSVFANKGQVDMMERWYEKFRNF 315
SA CK V N ++ + + + + + N
Sbjct: 503 SANIDAYGERGHILEAEKAFLCCKESRKLSVLEFNVMIKAYGISNRYEKACQLIDSMENH 562
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G+ P+ ++N LI + K + M++ Q Y VI +F +G +
Sbjct: 563 GVLPDKFSYNSLIQILASADLPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLEMA 622
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
E F++M ++ D + LIN +A+ G + ++ V + N YN++I
Sbjct: 623 EGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAVIYNSLIKL 682
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
K L E + YK ++ PD + + M + Y++ M
Sbjct: 683 YTKVGYLEEAQEAYKMLQASEVGPDVYSSNCMIDLYSERSM 723
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 129/300 (43%), Gaps = 3/300 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P + +Y L+ +L + P A+ +M E + Y A+++++ + ++ A
Sbjct: 566 PDKFSYNSLIQILASADLPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLEMAEGL 625
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+M N QPDV Y LI A D + + N V N ++ Y
Sbjct: 626 FKEMIGY-NVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAVIYNSLIKLYT 684
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G ++ + ML+++ PDV++ N ++ +++ + V E +E + G D
Sbjct: 685 KVGYLEEAQEAYK-MLQASEVGPDVYSSNCMIDLYSERSMVKQAEEIFESLKRKG-DANE 742
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+F +++ Y + + +++ MR+L +YNNV+ ++ G K TF++
Sbjct: 743 FSFAMMLCMYKRIGKLKEAFQIVQKMRELGLVTDLLSYNNVLGFYAMDGRFKDAVGTFKE 802
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M ++ D TF L G+ + + + + K + + +++ + ++ DD
Sbjct: 803 MIEAAIQPDDCTFKSLGVVLVKCGIPKQAVGKLEMTRKKDPQSGLQAWASILFSVVEVDD 862
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 105/266 (39%), Gaps = 47/266 (17%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
+V Y+ +++ A ++ +E+L+ +M R +TP T ++ Y K G+ ++ L
Sbjct: 195 NVIHYNIMLRILGKARKWHHVESLWDEMMSRGITPVNSTYGTLIDVYSKGGLTEEALHWL 254
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
M + +PD TM ++ + G+ E++ F+N+ + +
Sbjct: 255 DRMNKQGM-EPDEVTMGVVVQTYKKAGEFKKAEQF---FKNWSLGKTLKDEG-------- 302
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
K +S +E + +S TYN +I+ + G + TF M EG+ +T T
Sbjct: 303 KTSEPTATSAVESASQPHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLREGIIPNTVT 362
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+N +I C L E + ++M+
Sbjct: 363 -----------------------------------FNTMIHICGNHGQLEEAASLMQKME 387
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDK 479
E C PD+ T++I+ +AK D+
Sbjct: 388 ELRCPPDTRTYNILISLHAKHNNIDR 413
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 119/295 (40%), Gaps = 3/295 (1%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+ ++ AY ++ ++A ++ M+ PD ++Y++LI+ A + M
Sbjct: 536 FNVMIKAYGISNRYEKACQLIDSMEN-HGVLPDKFSYNSLIQILASADLPHKAKFYLMKM 594
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
E + + + V+ + K G + E + M+ +PDV +++ FA+ G
Sbjct: 595 QETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMI-GYNVQPDVVVYGILINAFADVGN 653
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
V + RN G+ +N LI Y K ++ + ++ + + N
Sbjct: 654 VREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGYLEEAQEAYKMLQASEVGPDVYSSNC 713
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+I+ +S+ K E FE + +G A+ +F ++ Y G + V+ +L
Sbjct: 714 MIDLYSERSMVKQAEEIFESLKRKG-DANEFSFAMMLCMYKRIGKLKEAFQIVQKMRELG 772
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ ++ YN V+ + +K M E +PD TF + K G+
Sbjct: 773 LVTDLLSYNNVLGFYAMDGRFKDAVGTFKEMIEAAIQPDDCTFKSLGVVLVKCGI 827
>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
Length = 536
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 145/361 (40%), Gaps = 39/361 (10%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
A+++F E L+ Q K T+ L+ L G+ E A ++ M G EP Y
Sbjct: 189 DAMKLFDEHLRFQSCNDTK--TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNT 246
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ +C+++ +++A +K+ C PDV TY+++I A + +L DM
Sbjct: 247 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ P VT N+++ GY KAG E + M+ S C PDV T +++ + GQV
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMI-SFGCFPDVVTFTSLIDGYCRVGQVSQ 365
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
R +E+ G+ P T++ILI A + K ++ + YN VI+
Sbjct: 366 GFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVID 425
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
F G E+M + K D TF LI G+ G + +S
Sbjct: 426 GFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVS------------ 473
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
++ +M C PD T S + K GM + Y L
Sbjct: 474 -----------------------IFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLN 510
Query: 485 Q 485
Q
Sbjct: 511 Q 511
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 153/368 (41%), Gaps = 44/368 (11%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR-------------- 191
TY L L K+G +LA ++F M +G+ P L L++++
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 192 ----------NSL---------IDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE 232
NSL +++A ++ +C D T++ LI+ + E
Sbjct: 165 FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-DTKTFNILIRGLCGVGKAE 223
Query: 233 LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTI 292
L M P+ VT N ++ G+ K+ ++ + + + C PDV T ++
Sbjct: 224 KALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSM 283
Query: 293 LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL-- 350
+S + G++ + GI P TFN+L+ Y K +M + E K+
Sbjct: 284 ISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA---GEMLTAEEIRGKMIS 340
Query: 351 --QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
FP T+ ++I+ + +G +E+M+A GM + T+ LIN N
Sbjct: 341 FGCFP-DVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL 399
Query: 409 KVISSV-RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
K + +LASK I YN VI KA + E + + M++K C+PD TF+I+
Sbjct: 400 KARELLGQLASK-DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTIL 458
Query: 468 TEAYAKEG 475
+ +G
Sbjct: 459 IIGHCMKG 466
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 116/278 (41%), Gaps = 4/278 (1%)
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
N + +TY+ L ++ A +L +++ M V+PN ++ + + G
Sbjct: 98 NIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFA 157
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+L E C +N++L+ +V+ + +++ F +T+TFNILI
Sbjct: 158 TALLLQSFEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIR 214
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+K ++ M TYN +I+ F + F+ + + + +
Sbjct: 215 GLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCS 274
Query: 390 -DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
D T+ +I+GY AG + S + +L I +N ++ KA +++ E +
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+M C PD TF+ + + Y + G + + L +E
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEE 372
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 88/210 (41%), Gaps = 2/210 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ K+G+ A ++ +M+ G P +T+L+ YCR + + F
Sbjct: 310 PTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRL 369
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+M P+ +TYS LI A + R L + + + P N V+ G+
Sbjct: 370 WEEMNA-RGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFC 428
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
KAG ++ ++ M E CKPD T ++ KG++ + K G P+
Sbjct: 429 KAGKVNEANVIVEEM-EKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDK 487
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
T + L+ K M + + + RK Q
Sbjct: 488 ITVSSLLSCLLKAGMAKEAYHLNQIARKGQ 517
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 86/205 (41%), Gaps = 3/205 (1%)
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
WT N + G D+ + +E ++ G+ P R L+ ++ +K ++++
Sbjct: 104 WTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL-- 161
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
++ + N+++ + + F++ DTKTF LI G G
Sbjct: 162 LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGK 221
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH-CRPDSETFS 465
K + + + S ++ YN +I K+++L + ++K +K C PD T++
Sbjct: 222 AEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYT 281
Query: 466 IMTEAYAKEGMNDKVYALEQEKLQM 490
M Y K G + +L + L++
Sbjct: 282 SMISGYCKAGKMREASSLLDDMLRL 306
>gi|225456631|ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
[Vitis vinifera]
Length = 875
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 153/337 (45%), Gaps = 8/337 (2%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
N V + DH + AL F LK Q ++ TY ++ +LG++ Q K+
Sbjct: 350 NQVLKQIQDHPV------ALGFFYWLKRQTGFKHDGHTYTTMVGILGRARQFGAINKLLA 403
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
EMV +G +P Y L+ +Y R + ++EA ++M+ CQPD TY TLI A
Sbjct: 404 EMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQE-AGCQPDRVTYCTLIDIHAKA 462
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
++ +YQ M E ++P+T T ++++ GKAG ++ M++ C P++ T
Sbjct: 463 GFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQG-CVPNLVT 521
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
N ++++ A Y +N G P+ T++I++ G ++ ++ M+
Sbjct: 522 YNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMK 581
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
+ + Y +++ + +G+ + ++ M G+ + T L++ +
Sbjct: 582 RKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLS 641
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
+ ++ +L + ++ Y ++S C +A +M
Sbjct: 642 DAYNLLQSMLRLGLQPSLQTYTLLLSCCTEARSSFDM 678
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 115/264 (43%), Gaps = 3/264 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ VF+ ++E QP TY L+ + K+G ++A ++ +M E + P Y+ +
Sbjct: 432 EAVSVFDRMQEAGC-QPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVI 490
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + + A +M C P++ TY+ +I A + LY+DM
Sbjct: 491 INCLGKAGHLTSAHKLFCEMVD-QGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAG 549
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ VT +IV+ G G ++ E + + M + PD ++ ++ G V+
Sbjct: 550 FQPDKVTYSIVMEVLGHCGHLEEAEAIFTEM-KRKNWVPDEPVYGLLVDLWGKVGNVEKS 608
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
WY+ N G+ P T N L+ A+ + ++++ M +L + TY ++
Sbjct: 609 WEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTLLLSC 668
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKA 389
++ + M + E M G A
Sbjct: 669 CTEARSSFDMGFCGELMAVTGHPA 692
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 83/197 (42%), Gaps = 2/197 (1%)
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
L + C D + N +L + W + R G + T+ ++G G+ R
Sbjct: 337 LRNLNCLMDAYQANQVLKQIQDHPVALGFFYWLK--RQTGFKHDGHTYTTMVGILGRARQ 394
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
+ ++ ++ M + TYN +I ++ F++M G + D T+C
Sbjct: 395 FGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCT 454
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
LI+ +A AG + + + ++ + Y+ +I+ KA L +++ M ++
Sbjct: 455 LIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQG 514
Query: 457 CRPDSETFSIMTEAYAK 473
C P+ T++IM AK
Sbjct: 515 CVPNLVTYNIMIALQAK 531
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 89/207 (42%), Gaps = 6/207 (2%)
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
K D T T++ + Q + + + G P T+N LI +YG+ ++ S
Sbjct: 376 KHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEAVS 435
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
V + M++ TY +I+ + G + +++M + DT T+ +IN
Sbjct: 436 VFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLG 495
Query: 403 NAGLFHKVISSVRLASKL---QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
AG + S+ +L ++ N+ YN +I+ KA + +Y+ M+ +P
Sbjct: 496 KAG---HLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQP 552
Query: 460 DSETFSIMTEAYAKEGMNDKVYALEQE 486
D T+SI+ E G ++ A+ E
Sbjct: 553 DKVTYSIVMEVLGHCGHLEEAEAIFTE 579
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 14/180 (7%)
Query: 315 FGIDPETRTFNILIGAYGK-----KRMYDKMS---SVMEYMRKLQFPWTSSTYNNVIEAF 366
GI P +R F G+ G R+ ++S + E +R L + N V++
Sbjct: 301 IGIAPVSRQF----GSSGHVVENVSRILRQLSWGPAAEEALRNLNCLMDAYQANQVLKQI 356
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
D A Y ++ G K D T+ ++ A F + + + NV
Sbjct: 357 QDHPVALGFFYWLKRQ--TGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNV 414
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
YN +I + +A+ L E V+ RM+E C+PD T+ + + +AK G D + Q+
Sbjct: 415 VTYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQK 474
>gi|2335106|gb|AAC02776.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 810
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 161/379 (42%), Gaps = 39/379 (10%)
Query: 131 FEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYC 190
FEM K +P TY L+ G++GQ A + ++M+ I P+ Y L+ A
Sbjct: 167 FEMQKWS--CKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACG 224
Query: 191 RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT 250
+ EA +M T PD+ T++ ++ A ++ + ++ M V P+T
Sbjct: 225 SSGNWREALEVCKKM-TDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDT 283
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLES-ATCKPDVWTMNTILSVFANKGQVDMMERWY 309
T NI++ K G Q + + M E A C+PDV T +I+ +++ KG+++ +
Sbjct: 284 TTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVF 343
Query: 310 EKFRNFGIDPETRTFNILIGAY-----------------------------------GKK 334
E G+ P ++N L+GAY G+
Sbjct: 344 EAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRS 403
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
R K V MRK + TYN +I+A+ G F QM +G+K + +
Sbjct: 404 RQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSV 463
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
C L+ + + V + + A I N + YN+ I + I A +L + +Y+ M++
Sbjct: 464 CTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRK 523
Query: 455 KHCRPDSETFSIMTEAYAK 473
K + DS TF+I+ +
Sbjct: 524 KKVKADSVTFTILISGSCR 542
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 153/353 (43%), Gaps = 19/353 (5%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
+Q+ +AL FE++K +P T+ ++ L K GQ A +FN M E+ E P++
Sbjct: 262 RQYSKALSYFELMKGAKV-RPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDV 320
Query: 182 --YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLY 238
+T+++ Y I+ M +P++ +Y+ L+ A V M + L
Sbjct: 321 VTFTSIMHLYSVKGEIENCRAVFEAM-VAEGLKPNIVSYNALMGAYAVHGMSGTALSVL- 378
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
D+ + + P+ V+ +L YG++ + + V M+ KP+V T N ++ + +
Sbjct: 379 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFL-MMRKERRKPNVVTYNALIDAYGS 437
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
G + + + GI P + L+ A + + + +V+ + ++
Sbjct: 438 NGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAA 497
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN+ I ++ + + + ++ M + +KAD+ TF LI+G + + IS ++
Sbjct: 498 YNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 557
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
L I K + E E ++ +MK C PD ++ M AY
Sbjct: 558 DLSIP------------LTKEGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAY 598
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 148/407 (36%), Gaps = 108/407 (26%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL V +K+ P +Y LL G+S QP A++VF M +E +P Y AL+
Sbjct: 374 ALSVLGDIKQNGII-PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALI 432
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC--------------------- 225
AY N + EA QM+ +P+V + TL+ AC
Sbjct: 433 DAYGSNGFLAEAVEIFRQMEQ-DGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 491
Query: 226 --------------VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG------------ 259
++A E LYQ M ++ V ++VT I++ G
Sbjct: 492 NLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAIS 551
Query: 260 -----------YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW 308
K G + E + + M + A C+PDV ++L + + E+W
Sbjct: 552 YLKEMEDLSIPLTKEGQVTEAESIFNQM-KMAGCEPDVIAYTSMLHAY------NASEKW 604
Query: 309 YEKFRNF------GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY--- 359
+ F GI+P++ + L+ A+ K + +M+ MR+ + P+T + +
Sbjct: 605 GKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEI 664
Query: 360 --------------------------------NNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
N ++ F G + M F ++ A G+
Sbjct: 665 FSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGV 724
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVIS 434
+ KT+ L+ G + K I + S I + Y +IS
Sbjct: 725 GINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS 771
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 86/188 (45%), Gaps = 2/188 (1%)
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
N ++ + A VD + + + + P+ T++ LI A+G+ + ++M+ M +
Sbjct: 147 NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLR 206
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
+ STYNN+I A G+ + ++M G+ D T +++ Y + + K
Sbjct: 207 AAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSK 266
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH--CRPDSETFSIM 467
+S L ++ + + +N +I K + ++ M+EK CRPD TF+ +
Sbjct: 267 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSI 326
Query: 468 TEAYAKEG 475
Y+ +G
Sbjct: 327 MHLYSVKG 334
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/326 (19%), Positives = 126/326 (38%), Gaps = 81/326 (24%)
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
I+ CV+ ++ I+ Y ++ N+++ + + DQ R L ++ +
Sbjct: 123 IELCVNVFKWMKIQKNYCARND--------IYNMMIRLHARHNWVDQ-ARGLFFEMQKWS 173
Query: 282 CKPDVWTMNTILSVFANKGQ-------VDMMER----------------------WYE-- 310
CKPD T + +++ GQ +D M R W E
Sbjct: 174 CKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREAL 233
Query: 311 ----KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
K + G+ P+ T NI++ AY R Y K S E M+ + ++T+N +I
Sbjct: 234 EVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCL 293
Query: 367 SDMGDA-------------------------------------KHMEYTFEQMHAEGMKA 389
S +G + ++ FE M AEG+K
Sbjct: 294 SKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKP 353
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
+ ++ L+ YA G+ +S + + I +V Y ++++ ++ + + V+
Sbjct: 354 NIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 413
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEG 475
M+++ +P+ T++ + +AY G
Sbjct: 414 LMMRKERRKPNVVTYNALIDAYGSNG 439
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 1/151 (0%)
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMR-KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+ F +LI ++ + +V ++M+ + + + YN +I + F
Sbjct: 108 KNFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFF 167
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M K D +T+ LIN + AG + ++ + + IA + S YN +I+AC +
Sbjct: 168 EMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSG 227
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
+ E V K+M + PD T +I+ AY
Sbjct: 228 NWREALEVCKKMTDNGVGPDLVTHNIVLSAY 258
>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 163/393 (41%), Gaps = 52/393 (13%)
Query: 104 AKAWVNTVAETFSDHVLKK---QWFQALQVFE---MLKEQ-PFYQPKEGTYMKLLVL-LG 155
A+ WV+ V FS V K Q + QV E +EQ + P + +L+ L
Sbjct: 191 ARTWVDGVE--FSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRGLC 248
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
+ G+ + A ++FNEM G P Y L+ +CR + +D L ++ + + PDV
Sbjct: 249 RIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDV 308
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
TY+++I + E L+ +M + PN T NI++ G+GK G E +
Sbjct: 309 VTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEE 368
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
ML C PD+ T +++ G+V+ + + + + P TF IL A K+
Sbjct: 369 MLLLG-CPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKE- 426
Query: 336 MYDKMSSVMEYMRKLQFPWTSS---TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
+++ ++R L++ + YN VI+ F G+ +M + K D
Sbjct: 427 --NRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKI 484
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
T+ LI G+ G +++E +S +N RM
Sbjct: 485 TYTILIIGHCMKG---------------RLSEAISIFN--------------------RM 509
Query: 453 KEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
C PDS T + + K GM ++ Y + Q
Sbjct: 510 LGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQ 542
>gi|356541064|ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 703
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 156/321 (48%), Gaps = 5/321 (1%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
LG S + A + F +M +G++ E+ AL+ ++C L+ EA + L++++
Sbjct: 308 LGHSAKD--AWQFFEKMNGKGVKWGEEVLGALIKSFCVEGLMSEALIILSELEK-KGVSS 364
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
+ Y+TL+ A + R E E L+ +M + + P T NI++ Y + + +E+++
Sbjct: 365 NTIVYNTLMDAYCKSNRVEEAEGLFVEMKTKGIKPTEATFNILMYAYSRKMQPEIVEKLM 424
Query: 274 SGMLESATCKPDVWTMNTILSVFA-NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
+ M E+ KP+ + I+S + K DM + K + GI P + ++ LI AY
Sbjct: 425 AEMQETG-LKPNAKSYTCIISAYGKQKNMSDMAADAFLKMKKDGIKPTSHSYTALIHAYS 483
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
++K + E M++ + TY +++AF GD + + ++ M E ++
Sbjct: 484 VSGWHEKAYAAFENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRREKVEGTRV 543
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
TF L++G+A G + + + + + + V YN +++A + ++ + + M
Sbjct: 544 TFNTLVDGFAKHGYYKEARDVISKFANVGLHPTVMTYNMLMNAYARGGRHSKLPELLEEM 603
Query: 453 KEKHCRPDSETFSIMTEAYAK 473
+ +PDS T+S M A+ +
Sbjct: 604 AAHNLKPDSVTYSTMIYAFLR 624
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 3/255 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRN-SLIDEAF 199
+P E T+ L+ + QPE+ K+ EM E G++P + YT +++AY + ++ D A
Sbjct: 398 KPTEATFNILMYAYSRKMQPEIVEKLMAEMQETGLKPNAKSYTCIISAYGKQKNMSDMAA 457
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+MK +P ++Y+ LI A + E +++M + P+ T +L
Sbjct: 458 DAFLKMKK-DGIKPTSHSYTALIHAYSVSGWHEKAYAAFENMQREGIKPSIETYTALLDA 516
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ +AG + ++ M V T NT++ FA G KF N G+ P
Sbjct: 517 FRRAGDTQTLMKIWKLMRREKVEGTRV-TFNTLVDGFAKHGYYKEARDVISKFANVGLHP 575
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
T+N+L+ AY + + K+ ++E M S TY+ +I AF + D +
Sbjct: 576 TVMTYNMLMNAYARGGRHSKLPELLEEMAAHNLKPDSVTYSTMIYAFLRVRDFSQAFFYH 635
Query: 380 EQMHAEGMKADTKTF 394
++M G D ++
Sbjct: 636 QEMVKSGQVMDVDSY 650
>gi|15225031|ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42570711|ref|NP_973429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g06000
gi|4006835|gb|AAC95177.1| hypothetical protein [Arabidopsis thaliana]
gi|110736272|dbj|BAF00106.1| hypothetical protein [Arabidopsis thaliana]
gi|330250896|gb|AEC05990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330250897|gb|AEC05991.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 536
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 145/361 (40%), Gaps = 39/361 (10%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
A+++F E L+ Q K T+ L+ L G+ E A ++ M G EP Y
Sbjct: 189 DAMKLFDEHLRFQSCNDTK--TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNT 246
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ +C+++ +++A +K+ C PDV TY+++I A + +L DM
Sbjct: 247 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ P VT N+++ GY KAG E + M+ S C PDV T +++ + GQV
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMI-SFGCFPDVVTFTSLIDGYCRVGQVSQ 365
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
R +E+ G+ P T++ILI A + K ++ + YN VI+
Sbjct: 366 GFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVID 425
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
F G E+M + K D TF LI G+ G + +S
Sbjct: 426 GFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVS------------ 473
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
++ +M C PD T S + K GM + Y L
Sbjct: 474 -----------------------IFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLN 510
Query: 485 Q 485
Q
Sbjct: 511 Q 511
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 153/368 (41%), Gaps = 44/368 (11%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR-------------- 191
TY L L K+G +LA ++F M +G+ P L L++++
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 192 ----------NSL---------IDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE 232
NSL +++A ++ +C D T++ LI+ + E
Sbjct: 165 FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-DTKTFNILIRGLCGVGKAE 223
Query: 233 LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTI 292
L M P+ VT N ++ G+ K+ ++ + + + C PDV T ++
Sbjct: 224 KALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSM 283
Query: 293 LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL-- 350
+S + G++ + GI P TFN+L+ Y K +M + E K+
Sbjct: 284 ISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA---GEMLTAEEIRGKMIS 340
Query: 351 --QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
FP T+ ++I+ + +G +E+M+A GM + T+ LIN N
Sbjct: 341 FGCFP-DVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL 399
Query: 409 KVISSV-RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
K + +LASK I YN VI KA + E + + M++K C+PD TF+I+
Sbjct: 400 KARELLGQLASK-DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTIL 458
Query: 468 TEAYAKEG 475
+ +G
Sbjct: 459 IIGHCMKG 466
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 120/278 (43%), Gaps = 4/278 (1%)
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
N + +TY+ L ++ A +L +++ M V+PN ++ + + G ++
Sbjct: 98 NIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKG---KL 154
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+ +L+S + +N++L+ +V+ + +++ F +T+TFNILI
Sbjct: 155 HFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIR 214
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+K ++ M TYN +I+ F + F+ + + + +
Sbjct: 215 GLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCS 274
Query: 390 -DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
D T+ +I+GY AG + S + +L I +N ++ KA +++ E +
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+M C PD TF+ + + Y + G + + L +E
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEE 372
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 6/228 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ K+G+ A ++ +M+ G P +T+L+ YCR + + F
Sbjct: 310 PTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRL 369
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+M P+ +TYS LI A + R L + + + P N V+ G+
Sbjct: 370 WEEMNA-RGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFC 428
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
KAG ++ ++ M E CKPD T ++ KG++ + K G P+
Sbjct: 429 KAGKVNEANVIVEEM-EKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDK 487
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQ----FPWTSSTYNNVIEA 365
T + L+ K M + + + RK Q P + T N + A
Sbjct: 488 ITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLETKTANATLAA 535
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 86/205 (41%), Gaps = 3/205 (1%)
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
WT N + G D+ + +E ++ G+ P R L+ ++ +K ++++
Sbjct: 104 WTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL-- 161
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
++ + N+++ + + F++ DTKTF LI G G
Sbjct: 162 LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGK 221
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH-CRPDSETFS 465
K + + + S ++ YN +I K+++L + ++K +K C PD T++
Sbjct: 222 AEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYT 281
Query: 466 IMTEAYAKEGMNDKVYALEQEKLQM 490
M Y K G + +L + L++
Sbjct: 282 SMISGYCKAGKMREASSLLDDMLRL 306
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 136/304 (44%), Gaps = 2/304 (0%)
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
+++A C +DE L ++ + C+PD+ +Y+ ++K A R++ +E L +M
Sbjct: 184 VVSAICEQGCVDEGVELLRKLPSF-GCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRV 242
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
PN T N ++ + G+F+Q+ LS M E C PD+ TI+ G ++
Sbjct: 243 GCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHG-CTPDLRMYATIIDGICKDGHHEV 301
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ ++G+ P +N ++ +++ ++ M + P T+N +++
Sbjct: 302 ANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVD 361
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
F G + EQM G D T+ +ING+ GL + + ++ S
Sbjct: 362 FFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKP 421
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
N Y V+ +A+ ++ + + M ++ C P+ TF+ + K+G+ ++ L
Sbjct: 422 NTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELL 481
Query: 485 QEKL 488
++ L
Sbjct: 482 KQML 485
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 148/352 (42%), Gaps = 4/352 (1%)
Query: 131 FEMLKEQPFY--QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAA 188
E+L++ P + +P +Y +L L + + + ++ EMV G P + L+A
Sbjct: 198 VELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAY 257
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP 248
CRN L ++ L+QM C PD+ Y+T+I E+ + M + P
Sbjct: 258 LCRNGLFEQVHEALSQMPE-HGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKP 316
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW 308
N V N VL G A +++ E +L+ M + C D T N ++ F G VD +
Sbjct: 317 NVVCYNTVLKGLCSAERWEEAEDLLAEMFQE-DCPLDDVTFNILVDFFCQNGLVDRVIEL 375
Query: 309 YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD 368
E+ G P+ T+ +I + K+ + D+ +++ M + +Y V++
Sbjct: 376 LEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCR 435
Query: 369 MGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSF 428
+ M +G + TF LIN GL + I ++ + ++
Sbjct: 436 AERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLIS 495
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
Y+ VI KA E + M K P++ +S M A ++EG DK+
Sbjct: 496 YSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKI 547
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 156/371 (42%), Gaps = 39/371 (10%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ L ++G E + ++M E G P +Y ++ C++ + A
Sbjct: 246 PNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDI 305
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L++M + +P+V Y+T++K A R+E E L +M + + VT NI++ +
Sbjct: 306 LSRMPSY-GLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFC 364
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G+ D++ +L MLE C PDV T T+++ F +G VD + G P T
Sbjct: 365 QNGLVDRVIELLEQMLEHG-CIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNT 423
Query: 322 RTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
++ I++ G +R D + +++ P T+N +I G + +
Sbjct: 424 ISYTIVLKGLCRAERWVDAQELISHMIQQGCLP-NPVTFNTLINFMCKKGLVEQAIELLK 482
Query: 381 QMHAEGMKADTKTFCCLINGYANAG-----------LFHKVISS-----VRLASKLQ--- 421
QM G D ++ +I+G AG + +K I+ +AS L
Sbjct: 483 QMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREG 542
Query: 422 ----------------IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ + + YNAVIS+ K + + M C P+ T++
Sbjct: 543 RTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYT 602
Query: 466 IMTEAYAKEGM 476
I+ A EG+
Sbjct: 603 ILIRGLASEGL 613
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 136/311 (43%), Gaps = 11/311 (3%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQD 240
Y A++A YCR + A + PN YTY ++++ C + + + T+ +
Sbjct: 79 YNAMIAGYCRAGQVAAARRLAAAVPVPPN----AYTYFPIVRSLCARGLIADAL-TVLDE 133
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M R +++L + G F R L +L + C D N ++S +G
Sbjct: 134 MPLRGCAATPPMCHVILEAACRGGGFRSAVRALQ-VLHAKGCTLDSGNCNLVVSAICEQG 192
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
VD K +FG +P+ ++N ++ + +D + +M M ++ P +T+N
Sbjct: 193 CVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFN 252
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV--RLAS 418
+I G + + QM G D + + +I+G G H+V + + R+ S
Sbjct: 253 TLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDG-HHEVANDILSRMPS 311
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ NV YN V+ A+ E E + M ++ C D TF+I+ + + + G+ D
Sbjct: 312 -YGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVD 370
Query: 479 KVYALEQEKLQ 489
+V L ++ L+
Sbjct: 371 RVIELLEQMLE 381
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 130/290 (44%), Gaps = 7/290 (2%)
Query: 122 KQWFQALQVF-EMLKEQPFYQPKEGTYMKLLV-LLGKSGQPELARKVFNEMVEEGIEPTP 179
++W +A + EM +E P + +LV ++G + ++ +M+E G P
Sbjct: 332 ERWEEAEDLLAEMFQED---CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDV 388
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
YT ++ +C+ L+DEA + L M C+P+ +Y+ ++K A R+ + L
Sbjct: 389 ITYTTVINGFCKEGLVDEAVMLLKNMSAC-GCKPNTISYTIVLKGLCRAERWVDAQELIS 447
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
M ++ PN VT N ++ K G+ +Q +L ML + C PD+ + +T++
Sbjct: 448 HMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNG-CSPDLISYSTVIDGLGKA 506
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G+ + N GI P T ++ + A ++ DK+ + + ++ ++ Y
Sbjct: 507 GKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALY 566
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
N VI + + F M + G + T+ LI G A+ GL +
Sbjct: 567 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVRE 616
>gi|297733858|emb|CBI15105.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 147/331 (44%), Gaps = 2/331 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY LL + G + A VF M E GI P Y+ L+ + + + +++ L +M
Sbjct: 12 TYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEM 71
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
++ PD+ +Y+ L++A + + +++ M PN T +I+L YG+ G
Sbjct: 72 ES-GGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGR 130
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+D + + M S T +P+ T N +++VF G + + ++P T+
Sbjct: 131 YDDVRDLFLEMKVSNT-EPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYE 189
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
LI A GK +++ ++ +M + +S Y VIEA+ + F M+
Sbjct: 190 GLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEV 249
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G K +T+ LI +A GL+ + + + + +A N +N VI A + E
Sbjct: 250 GSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEA 309
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ Y M++ C PD +T + Y G+
Sbjct: 310 IKAYVEMEKARCDPDEQTLEAVLSVYCFAGL 340
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 124/259 (47%), Gaps = 3/259 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ GK G E A+K+ M E+G+ P+ + YT ++ AY + +L +EA V
Sbjct: 182 EPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALV 241
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
N M + + +P V TY++LI+ ++ E + M + V N T N V+ +
Sbjct: 242 AFNTMNEVGS-KPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAF 300
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ G F++ + M E A C PD T+ +LSV+ G V+ E + + + GI P
Sbjct: 301 RQGGQFEEAIKAYVEM-EKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPS 359
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA-FSDMGDAKHMEYTF 379
+ +++ Y K +D +++ M + +I + D + + +EY F
Sbjct: 360 VMCYCMMLAVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDSNWQMVEYVF 419
Query: 380 EQMHAEGMKADTKTFCCLI 398
E++ +EG + + L+
Sbjct: 420 EKLKSEGCSLGVRFYNTLL 438
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 152/361 (42%), Gaps = 3/361 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A VF + E P TY L+ GK + E ++ EM G P Y L
Sbjct: 28 EAEMVFRTMNEGGIL-PDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVL 86
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L A+ ++ I EA QM+ C P+ TYS L+ R++ + L+ +M +
Sbjct: 87 LEAHAQSGSIKEAMGVFRQMQG-AGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSN 145
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN T NI++ +G+ G F ++ + M+E +P++ T ++ G +
Sbjct: 146 TEPNAATYNILINVFGEGGYFKEVVTLFHDMVEE-NVEPNMETYEGLIFACGKGGLHEDA 204
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++ G+ P ++ + +I AYG+ +Y++ M ++ T TYN++I+
Sbjct: 205 KKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQM 264
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
F+ G K E +M G+ + TF +I + G F + I + K + +
Sbjct: 265 FAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPD 324
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
AV+S A + E E + +K P + +M YAK D + L
Sbjct: 325 EQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLD 384
Query: 486 E 486
E
Sbjct: 385 E 385
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 120/265 (45%), Gaps = 1/265 (0%)
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
Q D+ TY+TL+ AC + E +++ M+E + P+ T + ++ +GK +++
Sbjct: 7 QADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSE 66
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+L M ES PD+ + N +L A G + + + + G P T++IL+ Y
Sbjct: 67 LLKEM-ESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLY 125
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
G+ YD + + M+ ++TYN +I F + G K + F M E ++ +
Sbjct: 126 GRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNM 185
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
+T+ LI GL + ++ + + Y VI A +A E +
Sbjct: 186 ETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNT 245
Query: 452 MKEKHCRPDSETFSIMTEAYAKEGM 476
M E +P ET++ + + +AK G+
Sbjct: 246 MNEVGSKPTVETYNSLIQMFAKGGL 270
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/171 (18%), Positives = 76/171 (44%)
Query: 313 RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
R+ GI + T+N L+ A ++ + D+ V M + +TY+ ++E F +
Sbjct: 2 RHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRL 61
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAV 432
+ + ++M + G D ++ L+ +A +G + + R N + Y+ +
Sbjct: 62 EKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSIL 121
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
++ + ++ ++ MK + P++ T++I+ + + G +V L
Sbjct: 122 LNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTL 172
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 3/194 (1%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
T+ ++ + GQ E A K + EM + +P + A+L+ YC L++E+ ++
Sbjct: 292 TFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEI 351
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM-DERSVTPNTVTQNIVLGGYGKAG 264
K L P V Y ++ A R++ L +M R + V ++ G Y
Sbjct: 352 KAL-GILPSVMCYCMMLAVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDS 410
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
+ +E V L+S C V NT+L GQ + R + G+ PE
Sbjct: 411 NWQMVEYVFE-KLKSEGCSLGVRFYNTLLEALWWLGQKERATRVLNEATKRGLFPELFRK 469
Query: 325 NILIGAYGKKRMYD 338
N L+ + RM++
Sbjct: 470 NKLVWSVDVHRMWE 483
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 161/370 (43%), Gaps = 12/370 (3%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
NTV F + + AL+V ++E+ P + TY L+ K G+ E A KVF+
Sbjct: 151 NTVIAGFCA---RGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFD 207
Query: 169 EMVEEG-IEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
EM+ +G + P+ +Y AL+ YC +D A M V TY+ L+ A
Sbjct: 208 EMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDM-VQRGIAMTVATYNLLMHALFM 266
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
R + ++M + +P+ T NI++ GY K G + V M + +
Sbjct: 267 DARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGV-RATAV 325
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T +++ VF+ KGQV +R + GI P+ +N LI ++ ++ +M M
Sbjct: 326 TYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEM 385
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
K + P TYN ++ F +G ++M G++ D ++ LI+GY+ G
Sbjct: 386 EKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKG-- 443
Query: 408 HKVISSVRLASKLQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
+ ++R+ ++ + YNA+I K + E + K M K PD T+
Sbjct: 444 -DIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTY 502
Query: 465 SIMTEAYAKE 474
+ E E
Sbjct: 503 ISLIEGLTTE 512
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 136/331 (41%), Gaps = 6/331 (1%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
T+ +L L +G+P A ++ +M P Y ++A +C + A + +M
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREM 173
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS-VTPNTVTQNIVLGGYGKAG 264
+ PD YTY+TLI R E ++ +M + V P+ V N ++GGY G
Sbjct: 174 RERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVG 233
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
D + M++ V T N ++ + E+ + G P+ T+
Sbjct: 234 KLDVALQYREDMVQRGIAM-TVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTY 292
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
NILI Y K+ K V E M + T+ TY ++I FS G + + F
Sbjct: 293 NILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVK 352
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
+G++ D + LIN + G + + K +I + YN ++ L E
Sbjct: 353 KGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDE 412
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ M ++ +PD +++ + Y+ +G
Sbjct: 413 ARTLIDEMTKRGIQPDLVSYNTLISGYSMKG 443
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 11/290 (3%)
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS-VTPNTVTQNIVLGGY 260
L ++ +P +P+ TY+T+I R + + ++M ER + P+ T ++ G+
Sbjct: 136 LELLRQMP--RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGW 193
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + +V ML P N ++ + + G++D+ ++ E GI
Sbjct: 194 CKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMT 253
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+N+L+ A +V+E M+K F TYN +I + G+ K FE
Sbjct: 254 VATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFE 313
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI-SACIKA 439
+M +G++A T+ LI ++ G + +A K I +V YNA+I S C
Sbjct: 314 EMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGG 373
Query: 440 DDLMEMERVYKRMKE---KHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
D MER Y+ M E K PD T++ + + G D+ L E
Sbjct: 374 D----MERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDE 419
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 77/183 (42%), Gaps = 8/183 (4%)
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ----FPWTSSTYNNVIEAFSDMGDAKH 374
P T+N +I + + ++ + +E MR+++ TY +I + +G +
Sbjct: 145 PNAVTYNTVIAGFCAR---GRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMED 201
Query: 375 MEYTFEQMHAEGMKADTKT-FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
F++M +G A + + LI GY + G + + IA V+ YN ++
Sbjct: 202 AVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLM 261
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
A + V + M++ PD T++I+ Y KEG K + +E Q +
Sbjct: 262 HALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVR 321
Query: 494 ASG 496
A+
Sbjct: 322 ATA 324
>gi|440800754|gb|ELR21789.1| pentatricopeptide repeat domain/PPR repeatcontaining protein
[Acanthamoeba castellanii str. Neff]
Length = 559
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 162/367 (44%), Gaps = 19/367 (5%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL G++G + +V +M E G+ P YT L+ A+ + + + M+
Sbjct: 104 LLQGYGRAGDRQRLAQVQRDMREVGVRPGMSTYTILIDAWGKAGDLRRMWQAWEDMRE-Q 162
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS---VTPNTVTQNIVLGGYGKAGMF 266
+P+V Y+++I +E + +M S V PN T N ++ YG+ M
Sbjct: 163 GLRPNVVVYTSVIATLGKLGDVAAMERTFAEMQRSSGDGVEPNRTTYNAMVHSYGQQQMM 222
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
D+ME ++ M D +T + +++ ++ G+VD ++ G P +
Sbjct: 223 DKMEALVERMRADPGLGLDNFTHSAVVAAWSRAGRVDKALEAFDSIAATGGQPSLHAWTA 282
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
++ G D+M ++ M++L +++ YN +I AF + M TF+ M +G
Sbjct: 283 ILHMLGTAGRSDEMLRTLDKMKRLGVKPSTAVYNTIINAFGKARNIHSMMDTFKAMRRDG 342
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+ AD KT+ LI+ +A G + L + + + +++ A +AD ++
Sbjct: 343 VAADVKTYNTLIDTWAKTGKAVEAEKFYVLMKREGLQPTMYTIASLMDAYTRADQFEKVL 402
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEG------------MNDKVYALEQEKLQMLLEA 494
R+ RMK++ PD+ F+++ + Y + G M + ALE ++EA
Sbjct: 403 RLISRMKKEGRAPDNVVFNLLIDTYGRMGKPEEAEKVLCGAMKEYGIALETNNFTSVIEA 462
Query: 495 SGHWQQN 501
W +N
Sbjct: 463 ---WARN 466
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 155/345 (44%), Gaps = 7/345 (2%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ GK+G + + +M E+G+ P +YT+++A + +
Sbjct: 130 RPGMSTYTILIDAWGKAGDLRRMWQAWEDMREQGLRPNVVVYTSVIATLGKLGDVAAMER 189
Query: 201 TLNQMK--TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD-ERSVTPNTVTQNIVL 257
T +M+ + +P+ TY+ ++ + + +E L + M + + + T + V+
Sbjct: 190 TFAEMQRSSGDGVEPNRTTYNAMVHSYGQQQMMDKMEALVERMRADPGLGLDNFTHSAVV 249
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
+ +AG D+ + + +P + IL + G+ D M R +K + G+
Sbjct: 250 AAWSRAGRVDKALEAFDSIAATG-GQPSLHAWTAILHMLGTAGRSDEMLRTLDKMKRLGV 308
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P T +N +I A+GK R M + MR+ TYN +I+ ++ G A E
Sbjct: 309 KPSTAVYNTIINAFGKARNIHSMMDTFKAMRRDGVAADVKTYNTLIDTWAKTGKAVEAEK 368
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV-RLASKLQIAENVSFYNAVISAC 436
+ M EG++ T L++ Y A F KV+ + R+ + + +NV F N +I
Sbjct: 369 FYVLMKREGLQPTMYTIASLMDAYTRADQFEKVLRLISRMKKEGRAPDNVVF-NLLIDTY 427
Query: 437 IKADDLMEMERVY-KRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+ E E+V MKE ++ F+ + EA+A+ G DK
Sbjct: 428 GRMGKPEEAEKVLCGAMKEYGIALETNNFTSVIEAWARNGNLDKA 472
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 140/328 (42%), Gaps = 49/328 (14%)
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQ------NIVLGGYGKAGMF 266
P Y LI+ C + R +L LY + + T +++L GYG+AG
Sbjct: 55 PTGAKYEMLIEQCFEEKRPDLATQLYDHLRAETTTTQAAAPVPLAVFDVLLQGYGRAGDR 114
Query: 267 DQMERVLSGMLESAT----------------------------------CKPDVWTMNTI 292
++ +V M E +P+V ++
Sbjct: 115 QRLAQVQRDMREVGVRPGMSTYTILIDAWGKAGDLRRMWQAWEDMREQGLRPNVVVYTSV 174
Query: 293 LSVFANKGQVDMMERWY---EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR- 348
++ G V MER + ++ G++P T+N ++ +YG+++M DKM +++E MR
Sbjct: 175 IATLGKLGDVAAMERTFAEMQRSSGDGVEPNRTTYNAMVHSYGQQQMMDKMEALVERMRA 234
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
+ T++ V+ A+S G F+ + A G + + +++ AG
Sbjct: 235 DPGLGLDNFTHSAVVAAWSRAGRVDKALEAFDSIAATGGQPSLHAWTAILHMLGTAGRSD 294
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+++ ++ +L + + + YN +I+A KA ++ M +K M+ D +T++ +
Sbjct: 295 EMLRTLDKMKRLGVKPSTAVYNTIINAFGKARNIHSMMDTFKAMRRDGVAADVKTYNTLI 354
Query: 469 EAYAKEGMNDKVYALEQEKLQMLLEASG 496
+ +AK G A+E EK +L++ G
Sbjct: 355 DTWAKTG-----KAVEAEKFYVLMKREG 377
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 123/272 (45%), Gaps = 4/272 (1%)
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
+ E ++ P T+ ++ ++G+ + A + F+ + G +P+ +TA+L
Sbjct: 228 LVERMRADPGLGLDNFTHSAVVAAWSRAGRVDKALEAFDSIAATGGQPSLHAWTAILHML 287
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
DE TL++MK L +P Y+T+I A A + ++ M V +
Sbjct: 288 GTAGRSDEMLRTLDKMKRL-GVKPSTAVYNTIINAFGKARNIHSMMDTFKAMRRDGVAAD 346
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
T N ++ + K G + E+ +++ +P ++T+ +++ + Q + + R
Sbjct: 347 VKTYNTLIDTWAKTGKAVEAEKFYV-LMKREGLQPTMYTIASLMDAYTRADQFEKVLRLI 405
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM-EYMRKLQFPWTSSTYNNVIEAFSD 368
+ + G P+ FN+LI YG+ ++ V+ M++ ++ + +VIEA++
Sbjct: 406 SRMKKEGRAPDNVVFNLLIDTYGRMGKPEEAEKVLCGAMKEYGIALETNNFTSVIEAWAR 465
Query: 369 MGDAKHMEYTFEQMHAE-GMKADTKTFCCLIN 399
G+ E +M+ + K D KT L++
Sbjct: 466 NGNLDKAEEWLHRMNTDYATKPDIKTLTTLLS 497
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 110 TVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF-N 168
T+A + Q+ + L++ +K++ P + L+ G+ G+PE A KV
Sbjct: 384 TIASLMDAYTRADQFEKVLRLISRMKKEG-RAPDNVVFNLLIDTYGRMGKPEEAEKVLCG 442
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
M E GI +T+++ A+ RN +D+A L++M T +PD+ T +TL+ C+ A
Sbjct: 443 AMKEYGIALETNNFTSVIEAWARNGNLDKAEEWLHRMNTDYATKPDIKTLTTLLSFCIPA 502
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 158/341 (46%), Gaps = 8/341 (2%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL L K G+ E A ++ + +G+ P +Y ++ YCR + A + + M+
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEK-Q 418
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+PD Y+ LI+ + E E M + V+P+ T NI++GGYG+ FD+
Sbjct: 419 GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 478
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI- 328
+L M ++ T P+V + T+++ ++ + + G+ P+ R +N+LI
Sbjct: 479 FDILKEMEDNGT-MPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLID 537
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
G K ++ D E ++K TYN +I+ S G E ++ +G+K
Sbjct: 538 GCCSKGKIEDAFRFSKEMLKK-GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLK 596
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
D T+ LI+GY AG + I+ + I + Y+ +IS C K + + ER+
Sbjct: 597 PDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTK-EGIELTERL 655
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ M K PD ++ + YA G +K + L+++ ++
Sbjct: 656 FGEMSLK---PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIE 693
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 165/371 (44%), Gaps = 9/371 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+ L++F +K Y P Y L+ L K + A ++F+EM+ + P+ Y L
Sbjct: 197 KGLELFNRMKHDRIY-PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTL 255
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ YC+ +++F +MK + +P + T++TL+K A E E + ++M +
Sbjct: 256 IDGYCKAGNPEKSFKVRERMKA-DHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT---CKPDVWTMNTILSVFANKGQV 302
P+ T +I+ GY ++ E L G+ E+A K + +T + +L+ +G++
Sbjct: 315 FVPDAFTFSILFDGYSSN---EKAEAAL-GVYETAVDSGVKMNAYTCSILLNALCKEGKI 370
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ E + G+ P +N +I Y +K +E M K YN +
Sbjct: 371 EKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCL 430
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I F ++G+ ++ E +M +G+ +T+ LI GY F K ++
Sbjct: 431 IRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGT 490
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
NV Y +I+ K L+E + V + M+++ P ++++ + +G + +
Sbjct: 491 MPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFR 550
Query: 483 LEQEKLQMLLE 493
+E L+ +E
Sbjct: 551 FSKEMLKKGIE 561
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 165/362 (45%), Gaps = 10/362 (2%)
Query: 136 EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI 195
E+ +P Y L+ + G+ E A K N+M +G+ P+ E Y L+ Y R
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEF 475
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI 255
D+ F L +M+ P+V +Y TLI + + + +DM++R V+P N+
Sbjct: 476 DKCFDILKEMED-NGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNM 534
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
++ G G + R ML+ + ++ T NT++ + G++ E +
Sbjct: 535 LIDGCCSKGKIEDAFRFSKEMLKKGI-ELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRK 593
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G+ P+ T+N LI YG + ++ E M++ T TY+ +I + G +
Sbjct: 594 GLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG----I 649
Query: 376 EYTFEQMHAE-GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVIS 434
E T E++ E +K D + +++ YA G K + + + I + + YN++I
Sbjct: 650 ELT-ERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLIL 708
Query: 435 ACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY--AKEGMNDKVYALEQEKLQMLL 492
+K L E+ + M + P+++T++I+ + + K+ M+ V+ E ++ LL
Sbjct: 709 GQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLL 768
Query: 493 EA 494
+
Sbjct: 769 DV 770
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 142/355 (40%), Gaps = 21/355 (5%)
Query: 138 PFYQPKE---------------GTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
PF PKE +Y+ L VLL +S A +F + EGI P+ +
Sbjct: 88 PFASPKELFSAFSLSSPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSL 147
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTL--PNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
T LL + + VT+N + + +P + Y I+A V L+
Sbjct: 148 TLLLDHLVKTK---QFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNR 204
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M + P+ N+++ G K + E++ ML + P + T NT++ + G
Sbjct: 205 MKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEML-ARRLLPSLITYNTLIDGYCKAG 263
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+ + E+ + I+P TFN L+ K M + +V++ M+ L F + T++
Sbjct: 264 NPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFS 323
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+ + +S A+ +E G+K + T L+N G K +
Sbjct: 324 ILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK 383
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ N YN +I + DL+ + M+++ +PD ++ + + + G
Sbjct: 384 GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELG 438
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 116/272 (42%), Gaps = 6/272 (2%)
Query: 129 QVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAA 188
Q+ + E PK Y L+ G+ E A + EM+++GIE Y L+
Sbjct: 514 QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDG 573
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP 248
+ EA L ++ + +PDV+TY++LI A + LY++M + P
Sbjct: 574 LSMTGKLSEAEDLLLEI-SRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKP 632
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW 308
T ++++ K G+ + ER+ M + KPD+ N +L +A G ++
Sbjct: 633 TLKTYHLLISLCTKEGI-ELTERLFGEM----SLKPDLLVYNGVLHCYAVHGDMEKAFNL 687
Query: 309 YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD 368
++ I + T+N LI K ++ S+++ M + + TYN +++ +
Sbjct: 688 QKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCE 747
Query: 369 MGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+ D + +M +G D L++G
Sbjct: 748 VKDYMSAYVWYREMQEKGFLLDVCIGNELVSG 779
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 77/193 (39%), Gaps = 15/193 (7%)
Query: 292 ILSVFANKGQ-VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
+LSV N+ + + + RN GI P + + +L+ K + + +V + +
Sbjct: 114 LLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILES 173
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG----- 405
F + Y I+A + D F +M + + + LI+G
Sbjct: 174 DFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDA 233
Query: 406 --LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
LF ++++ L S + YN +I KA + + +V +RMK H P T
Sbjct: 234 EQLFDEMLARRLLPSLIT-------YNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLIT 286
Query: 464 FSIMTEAYAKEGM 476
F+ + + K GM
Sbjct: 287 FNTLLKGLFKAGM 299
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 144/345 (41%), Gaps = 4/345 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P + TY L+ +G ++A ++ EM G E ++T L+ C + EA
Sbjct: 55 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEH 114
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
M +C PDV TY+ L+ A A +F+ + + ++M + P+TVT + ++ G
Sbjct: 115 FRAMA--KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLC 172
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK-GQVDMMERWYEKFRNFGIDPE 320
K G +Q RVL +++ D TI+ NK V++ + G P
Sbjct: 173 KFGSEEQAFRVLEDVIQRGMGNSDA-AFETIIQRLCNKYNSVELASKVLGVVIAKGFTPT 231
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
FN++I + K + D ++E M + T+ +I + E
Sbjct: 232 VLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLE 291
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M G + T+ +ING G +L + NV +N +I KA
Sbjct: 292 KMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAK 351
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
+ E ++Y RM+E C PD T++ + + K D+ + L Q
Sbjct: 352 RIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQ 396
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 127/291 (43%), Gaps = 2/291 (0%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K A ++ E++ E+ P T+ L+ L K+ + A+++ +MV G P
Sbjct: 246 KDLDSAYKLLEVMIEKGCV-PNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVT 304
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y+ ++ C+ +D+A+ L Q+ NC P+V T++ LI A R E LY M
Sbjct: 305 YSTVINGLCKQGQVDDAY-ELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRM 363
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
E P+ +T N ++ G K+ D+ ++ + ES + T +T+ +A G+
Sbjct: 364 RETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGR 423
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ R + + G P+ T+ LI Y K ++ ++E M FP +T +
Sbjct: 424 MADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSA 483
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVIS 412
V+ + + F+ M A G D + ++ G A A K ++
Sbjct: 484 VLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALA 534
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 158/379 (41%), Gaps = 11/379 (2%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+ Q A ++F+++ E+ P T+ L+ L K+ + E AR++++ M E G P
Sbjct: 315 QGQVDDAYELFQLM-ERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDII 373
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
Y +L+ C++ +DEAF + + TYSTL R ++
Sbjct: 374 TYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSM 433
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
+ ++ +P+ T ++ Y K ++ ++ M S P V T++ +L
Sbjct: 434 LVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEM-ASKGFPPRVNTLSAVLGGLFEGN 492
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM---RKLQFPWTSS 357
+ + ++ G + +N+++ + +DK +V+E + R +F +SS
Sbjct: 493 HTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSS 552
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
+ ++E+ +G + +M G A ++ L++G + + +
Sbjct: 553 AVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAM 612
Query: 418 SKLQIAENVSFYNAVIS---ACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
A +S N VIS + K DD E+ +RM + C PD ET + + Y K
Sbjct: 613 VSAGPAPEISTVNVVISWLCSAAKVDDAYEL---VQRMSKLGCCPDIETCNTLIGGYCKS 669
Query: 475 GMNDKVYALEQEKLQMLLE 493
G D L +E + LE
Sbjct: 670 GRADLARKLLEEMTEAGLE 688
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 110/276 (39%), Gaps = 3/276 (1%)
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
C P+ +TY LI+ A ++ L ++M N V ++ G AG +
Sbjct: 53 CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEAL 112
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
M + C PDV T ++ G+ D + + G P+T TF+ LI
Sbjct: 113 EHFRAM--AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDG 170
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM-EYTFEQMHAEGMKA 389
K ++ V+E + + + + + +I+ + ++ + + A+G
Sbjct: 171 LCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTP 230
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
F +ING+ A + + + NV + +I+ KA+ + E +++
Sbjct: 231 TVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLL 290
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
++M C P+ T+S + K+G D Y L Q
Sbjct: 291 EKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQ 326
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 91/223 (40%), Gaps = 3/223 (1%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+ P+ T +L L + E A ++F+ M G +Y ++ R S D+A
Sbjct: 474 FPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKAL 533
Query: 200 VTLNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVL 257
L Q+ K P L+++ + + + L M ER + N +L
Sbjct: 534 AVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLL 593
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
G + +D+ +V M+ SA P++ T+N ++S + +VD ++ G
Sbjct: 594 SGLSRLQRWDEATQVFEAMV-SAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGC 652
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
P+ T N LIG Y K D ++E M + +T++
Sbjct: 653 CPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHD 695
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
TY +I FS GD E+M + G + + L+ G +AG + + R
Sbjct: 59 TYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM 118
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
+K A +V Y A++ A KA E + + + M + C PD+ TFS + + K G
Sbjct: 119 AK-DCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSE 177
Query: 478 DKVYALEQEKLQ 489
++ + + ++ +Q
Sbjct: 178 EQAFRVLEDVIQ 189
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 170/401 (42%), Gaps = 39/401 (9%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
K Q +AL+ FE +K+ P TY ++ +L K+G+ E A V + M + G+ P
Sbjct: 388 KGQVDEALKKFEEMKKDAI--PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVI 445
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
++ C+ +D+A + C+PD TY +LI+ R + LY+
Sbjct: 446 TVNIMVDRLCKAQRLDDACSIFEGLDH-KTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQ 504
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M + + PN V ++ + K G + ++ + ML C PD+ +NT + G
Sbjct: 505 MLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLG-CSPDLLLLNTYMDCVFKAG 563
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILI----------------------GAYGKKRMYD 338
+++ +++ +N G P+ R++ ILI G R Y+
Sbjct: 564 EIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYN 623
Query: 339 -------------KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
K ++E M+ T TY +VI+ + + FE+ ++
Sbjct: 624 TVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 683
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G++ + + LI+G+ G + + + + NV +N ++ A +KA+++ E
Sbjct: 684 GIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEA 743
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
++ MK+ C P+ T+SI+ K +K + QE
Sbjct: 744 LVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQE 784
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 162/406 (39%), Gaps = 39/406 (9%)
Query: 117 DHVLKKQWFQ-ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
D + K Q A +FE L + +P TY L+ LG+ G+ + A K++ +M++
Sbjct: 452 DRLCKAQRLDDACSIFEGLDHKTC-RPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQ 510
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
P +YT+L+ + + ++ N+M L C PD+ +T + A E
Sbjct: 511 IPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRL-GCSPDLLLLNTYMDCVFKAGEIEKGR 569
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
L+Q++ P+ + I++ G KAG + + M E C D NT++
Sbjct: 570 ALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQG-CVLDTRAYNTVIDG 628
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
F G+V+ + E+ + G +P T+ +I K D+ + E +
Sbjct: 629 FCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELN 688
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA----------- 404
Y+++I+ F +G E++ +G+ + T+ CL++ A
Sbjct: 689 VVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQ 748
Query: 405 -------------------GL-----FHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
GL F+K + K NV Y +IS KA
Sbjct: 749 SMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAG 808
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+++E + ++++ KEK DS ++ + E + Y L +E
Sbjct: 809 NIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEE 854
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 152/380 (40%), Gaps = 39/380 (10%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
NT E + ++ +A + +++ F +P Y L+ L S + +F
Sbjct: 166 NTCIEIVLSFIKSRKLREAFTFIQTMRKLKF-RPAFSAYTNLIGALSTSRDSDCMLTLFQ 224
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
+M E G L+T L+ + R +D A L++MK+ + +PDV Y+ I A
Sbjct: 225 QMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKS-NSLEPDVVLYNVCIDCFGKA 283
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
+ ++ + +M + + VT ++G KA ++ + M ++ P +
Sbjct: 284 GKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQV-PCAYA 342
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
NT++ + G+ + E+ R G P ++N ++ G+K D+ E M+
Sbjct: 343 YNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMK 402
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
K P STYN +I+ G + + M +AGLF
Sbjct: 403 KDAIP-NLSTYNIMIDMLCKAGKLETALVVRDAMK-------------------DAGLFP 442
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
VI+ N ++ KA L + +++ + K CRPD+ T+ +
Sbjct: 443 NVIT----------------VNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLI 486
Query: 469 EAYAKEGMNDKVYALEQEKL 488
E + G D+ Y L ++ L
Sbjct: 487 EGLGRHGRVDEAYKLYEQML 506
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/361 (20%), Positives = 151/361 (41%), Gaps = 39/361 (10%)
Query: 114 TFSDHVLKKQWFQ-ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE 172
T+ D V K + +F+ +K F P +Y L+ L K+G A ++F M E
Sbjct: 554 TYMDCVFKAGEIEKGRALFQEIKNLGFI-PDARSYTILIHGLVKAGFAHEAYELFYTMKE 612
Query: 173 EGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE 232
+G Y ++ +C++ +++A+ L +MKT + +P V TY ++I R +
Sbjct: 613 QGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGH-EPTVVTYGSVIDGLAKIDRLD 671
Query: 233 LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTI 292
L+++ + + N V + ++ G+GK G D+ ++ +++ P+V+T N +
Sbjct: 672 EAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGL-TPNVYTWNCL 730
Query: 293 LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF 352
L ++ ++ ++ P T++ILI K R ++K + M+K F
Sbjct: 731 LDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGF 790
Query: 353 PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVIS 412
TY +I + G+ + FE+ +G AD+
Sbjct: 791 KPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADS--------------------- 829
Query: 413 SVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
+ YNA+I A+ + R+++ + K C ++T ++ ++
Sbjct: 830 --------------AIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLH 875
Query: 473 K 473
K
Sbjct: 876 K 876
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/329 (19%), Positives = 122/329 (37%), Gaps = 38/329 (11%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y LL+++ ++ + ++ EM G P+ ++ ++ ++ + EAF + M+
Sbjct: 133 YNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMR 192
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
L +P Y+ LI A + + + TL+Q M E N
Sbjct: 193 KLKF-RPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVN----------------- 234
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
V T++ VFA +G+VD ++ ++ ++P+ +N+
Sbjct: 235 -------------------VHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNV 275
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
I +GK D M+ TY ++I FE M
Sbjct: 276 CIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNK 335
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+ +I GY AG F S + + +V YN ++S + + E
Sbjct: 336 QVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEAL 395
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ ++ MK K P+ T++IM + K G
Sbjct: 396 KKFEEMK-KDAIPNLSTYNIMIDMLCKAG 423
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 82/197 (41%), Gaps = 1/197 (0%)
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
N++L V A + + +E+ E+ G P T ++ ++ K R + + ++ MRK
Sbjct: 134 NSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRK 193
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
L+F S Y N+I A S D+ M F+QM G + F LI +A G
Sbjct: 194 LKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDA 253
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+S + + +V YN I KA + + + MK D T++ M
Sbjct: 254 ALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIG 313
Query: 470 AYAK-EGMNDKVYALEQ 485
K + +N+ V E
Sbjct: 314 VLCKADRLNEAVELFEH 330
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 170/401 (42%), Gaps = 39/401 (9%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
K Q +AL+ FE +K+ P TY ++ +L K+G+ E A V + M + G+ P
Sbjct: 388 KGQVDEALKKFEEMKKDAI--PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVI 445
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
++ C+ +D+A + C+PD TY +LI+ R + LY+
Sbjct: 446 TVNIMVDRLCKAQRLDDACSIFEGLDH-KTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQ 504
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M + + PN V ++ + K G + ++ + ML C PD+ +NT + G
Sbjct: 505 MLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLG-CSPDLLLLNTYMDCVFKAG 563
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILI----------------------GAYGKKRMYD 338
+++ +++ +N G P+ R++ ILI G R Y+
Sbjct: 564 EIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYN 623
Query: 339 -------------KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
K ++E M+ T TY +VI+ + + FE+ ++
Sbjct: 624 TVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 683
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G++ + + LI+G+ G + + + + NV +N ++ A +KA+++ E
Sbjct: 684 GIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEA 743
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
++ MK+ C P+ T+SI+ K +K + QE
Sbjct: 744 LVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQE 784
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 162/406 (39%), Gaps = 39/406 (9%)
Query: 117 DHVLKKQWFQ-ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
D + K Q A +FE L + +P TY L+ LG+ G+ + A K++ +M++
Sbjct: 452 DRLCKAQRLDDACSIFEGLDHKTC-RPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQ 510
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
P +YT+L+ + + ++ N+M L C PD+ +T + A E
Sbjct: 511 IPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRL-GCSPDLLLLNTYMDCVFKAGEIEKGR 569
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
L+Q++ P+ + I++ G KAG + + M E C D NT++
Sbjct: 570 ALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQG-CVLDTRAYNTVIDG 628
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
F G+V+ + E+ + G +P T+ +I K D+ + E +
Sbjct: 629 FCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELN 688
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA----------- 404
Y+++I+ F +G E++ +G+ + T+ CL++ A
Sbjct: 689 VVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQ 748
Query: 405 -------------------GL-----FHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
GL F+K + K NV Y +IS KA
Sbjct: 749 SMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAG 808
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+++E + ++++ KEK DS ++ + E + Y L +E
Sbjct: 809 NIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEE 854
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 152/380 (40%), Gaps = 39/380 (10%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
NT E + ++ +A + +++ F +P Y L+ L S + +F
Sbjct: 166 NTCIEIVLSFIKSRKLREAFTFIQTMRKLKF-RPAFSAYTNLIGALSTSRDSDCMLTLFQ 224
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
+M E G L+T L+ + R +D A L++MK+ + +PDV Y+ I A
Sbjct: 225 QMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKS-NSLEPDVVLYNVCIDCFGKA 283
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
+ ++ + +M + + VT ++G KA ++ + M ++ P +
Sbjct: 284 GKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQV-PCAYA 342
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
NT++ + G+ + E+ R G P ++N ++ G+K D+ E M+
Sbjct: 343 YNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMK 402
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
K P STYN +I+ G + + M +AGLF
Sbjct: 403 KDAIP-NLSTYNIMIDMLCKAGKLETALVVRDAMK-------------------DAGLFP 442
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
VI+ N ++ KA L + +++ + K CRPD+ T+ +
Sbjct: 443 NVIT----------------VNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLI 486
Query: 469 EAYAKEGMNDKVYALEQEKL 488
E + G D+ Y L ++ L
Sbjct: 487 EGLGRHGRVDEAYKLYEQML 506
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/361 (20%), Positives = 151/361 (41%), Gaps = 39/361 (10%)
Query: 114 TFSDHVLKKQWFQ-ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE 172
T+ D V K + +F+ +K F P +Y L+ L K+G A ++F M E
Sbjct: 554 TYMDCVFKAGEIEKGRALFQEIKNLGFI-PDARSYTILIHGLVKAGFAHEAYELFYTMKE 612
Query: 173 EGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE 232
+G Y ++ +C++ +++A+ L +MKT + +P V TY ++I R +
Sbjct: 613 QGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGH-EPTVVTYGSVIDGLAKIDRLD 671
Query: 233 LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTI 292
L+++ + + N V + ++ G+GK G D+ ++ +++ P+V+T N +
Sbjct: 672 EAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGL-TPNVYTWNCL 730
Query: 293 LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF 352
L ++ ++ ++ P T++ILI K R ++K + M+K F
Sbjct: 731 LDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGF 790
Query: 353 PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVIS 412
TY +I + G+ + FE+ +G AD+
Sbjct: 791 KPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADS--------------------- 829
Query: 413 SVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
+ YNA+I A+ + R+++ + K C ++T ++ ++
Sbjct: 830 --------------AIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLH 875
Query: 473 K 473
K
Sbjct: 876 K 876
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/329 (19%), Positives = 122/329 (37%), Gaps = 38/329 (11%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y LL+++ ++ + ++ EM G P+ ++ ++ ++ + EAF + M+
Sbjct: 133 YNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMR 192
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
L +P Y+ LI A + + + TL+Q M E N
Sbjct: 193 KLKF-RPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVN----------------- 234
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
V T++ VFA +G+VD ++ ++ ++P+ +N+
Sbjct: 235 -------------------VHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNV 275
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
I +GK D M+ TY ++I FE M
Sbjct: 276 CIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNK 335
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+ +I GY AG F S + + +V YN ++S + + E
Sbjct: 336 QVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEAL 395
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ ++ MK K P+ T++IM + K G
Sbjct: 396 KKFEEMK-KDAIPNLSTYNIMIDMLCKAG 423
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 82/197 (41%), Gaps = 1/197 (0%)
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
N++L V A + + +E+ E+ G P T ++ ++ K R + + ++ MRK
Sbjct: 134 NSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRK 193
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
L+F S Y N+I A S D+ M F+QM G + F LI +A G
Sbjct: 194 LKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDA 253
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+S + + +V YN I KA + + + MK D T++ M
Sbjct: 254 ALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIG 313
Query: 470 AYAK-EGMNDKVYALEQ 485
K + +N+ V E
Sbjct: 314 VLCKADRLNEAVELFEH 330
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 149/336 (44%), Gaps = 14/336 (4%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ + K G+ E A +F++MVE G+ P Y L+ YC ++ AF
Sbjct: 240 EPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFS 299
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
++M P V TY+ L+ A R + + ++M ++ + P+ +T NI++ GY
Sbjct: 300 YRDEM-VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGY 358
Query: 261 GKAG----MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG 316
+ G FD +LS +E P T +++ V + + ++ + +EK + G
Sbjct: 359 SRCGNAKRAFDLHNEMLSKGIE-----PTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 413
Query: 317 IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME 376
+ P+ FN +I + ++ +++ M + P T+N +++ G +
Sbjct: 414 VSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEAR 473
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSF--YNAVIS 434
++M G+K D ++ LI+GY G VR L I N + YNA+I
Sbjct: 474 MLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAF-XVR-DEMLSIGFNPTLLTYNALIK 531
Query: 435 ACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
K + E + K M K PD T+ + E
Sbjct: 532 CLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 567
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 144/339 (42%), Gaps = 14/339 (4%)
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
G+ + AR+ M G +P Y ++ Y I+ A L+ M+ + +PD YT
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMR-VKGIEPDSYT 245
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y +LI R E L+ M E + PN VT N ++ GY G +ER S
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKG---DLERAFSYRD 302
Query: 278 E--SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK-- 333
E P V T N ++ +G++ + ++ R GI P+ T+NILI Y +
Sbjct: 303 EMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCG 362
Query: 334 --KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
KR +D + E + K P T TY ++I S K + FE++ +G+ D
Sbjct: 363 NAKRAFDLHN---EMLSKGIEP-THVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDV 418
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
F +I+G+ G + ++ + + + +N ++ + + E +
Sbjct: 419 IMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE 478
Query: 452 MKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
MK + +PD +++ + Y + G + + E L +
Sbjct: 479 MKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSI 517
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 123/273 (45%), Gaps = 4/273 (1%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
EM+K+ P TY L+ L G+ A + EM ++GI P Y L+ Y R
Sbjct: 303 EMVKKG--IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSR 360
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
AF N+M + +P TY++LI R + + L++ + ++ V+P+ +
Sbjct: 361 CGNAKRAFDLHNEMLS-KGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVI 419
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
N ++ G+ G ++ +L M + + PD T NT++ +G+V+ ++
Sbjct: 420 MFNAMIDGHCANGNVERAFMLLKEM-DRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE 478
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
+ GI P+ ++N LI YG++ V + M + F T TYN +I+ +
Sbjct: 479 MKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQE 538
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
E ++M +G+ D T+ LI G N
Sbjct: 539 GDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 571
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 160/367 (43%), Gaps = 36/367 (9%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSL----------- 194
+Y +VLL + P+LA ++ +++E I EL+ L + R S+
Sbjct: 128 SYCLAVVLLARLPSPKLALQLLKQVMETRIATNRELFDELTLSRDRLSVKSSIVFDLLEG 187
Query: 195 -IDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQ 253
+ +A + M+ L +P+V +Y+T+I E + M + + P++ T
Sbjct: 188 KLKKAREFIGFMEGL-GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
++ G K G ++ + M+E P+ T NT++ + NKG ++ + ++
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLV-PNAVTYNTLIDGYCNKGDLERAFSYRDEMV 305
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
GI P T+N+L+ A + + +++ MRK + TYN +I +S G+AK
Sbjct: 306 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 365
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLI------NGYANA-GLFHKVISSVRLASKLQIAENV 426
+M ++G++ T+ LI N A LF K++ ++ +V
Sbjct: 366 RAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ-------GVSPDV 418
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+NA+I ++ + K M K PD TF+ + + +EG + E
Sbjct: 419 IMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREG--------KVE 470
Query: 487 KLQMLLE 493
+ +MLL+
Sbjct: 471 EARMLLD 477
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 121/277 (43%), Gaps = 21/277 (7%)
Query: 112 AETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEG-------------------TYMKLLV 152
A ++ D ++KK ++ + +L F + + G TY L+
Sbjct: 297 AFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILIN 356
Query: 153 LLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQ 212
+ G + A + NEM+ +GIEPT YT+L+ R + + EA ++
Sbjct: 357 GYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILD-QGVS 415
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
PDV ++ +I E L ++MD +SV P+ VT N ++ G + G ++ R+
Sbjct: 416 PDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEE-ARM 474
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
L ++ KPD + NT++S + +G + ++ + G +P T+N LI
Sbjct: 475 LLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLC 534
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
K + D +++ M STY ++IE ++
Sbjct: 535 KNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 571
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 103/237 (43%), Gaps = 41/237 (17%)
Query: 265 MFDQME------RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
+FD +E R G +E KP+V + NTI+ ++++G ++ R + R GI+
Sbjct: 181 VFDLLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIE 240
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P++ T+ LI K+ ++ S + + M ++ + TYN +I+ + + GD +
Sbjct: 241 PDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSY 300
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
++M +G I +VS YN ++ A
Sbjct: 301 RDEMVKKG-----------------------------------IMPSVSTYNLLVHALFM 325
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
+ E + + K M++K PD+ T++I+ Y++ G + + L E L +E +
Sbjct: 326 EGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPT 382
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 142/317 (44%), Gaps = 3/317 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F+ + F QP TY L+ L K G A ++ MV++ P Y +
Sbjct: 200 EALHLFDKTIGEGF-QPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTI 258
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + C++ + EAF ++M T PD++TY++LI A + ++ + TL +M
Sbjct: 259 IDSLCKDRQVTEAFNLFSEMIT-KGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK 317
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ PN V + V+ K GM V+ M++ +PDV T ++ + ++D
Sbjct: 318 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGV-EPDVVTYTALMDGHCLRSEMDEA 376
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ ++ + G P R++NILI Y + + DK ++E M + TYN +I
Sbjct: 377 VKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHG 436
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+G +H F +M A G D T+ L++ + + ++ + +
Sbjct: 437 LCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDAD 496
Query: 426 VSFYNAVISACIKADDL 442
+ YN I +A +L
Sbjct: 497 ILVYNIAIDGMCRAGEL 513
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 149/370 (40%), Gaps = 43/370 (11%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
AL F ML P P + KLL + K + +M GI P
Sbjct: 95 DALSSFNRMLHMHP--PPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDE 243
L+ ++C + AF L ++ L CQPD T++TLI+ CV+ E + + + E
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKL-GCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGE 211
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
P+ VT ++ G K G R+L M++ C+P+V NTI+ QV
Sbjct: 212 -GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQK-NCRPNVIAYNTIIDSLCKDRQVT 269
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ + GI P+ T+N LI A + +++++ M + ++ V+
Sbjct: 270 EAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 329
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
+A G + M G++ D T+ L++G+
Sbjct: 330 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGH---------------------- 367
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK-EGMNDKVYA 482
C+++ ++ E +V+ M K C P+ +++I+ Y + + M+ +
Sbjct: 368 ------------CLRS-EMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 414
Query: 483 LEQEKLQMLL 492
LEQ LQ L+
Sbjct: 415 LEQMSLQGLI 424
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 160/384 (41%), Gaps = 20/384 (5%)
Query: 100 RKAKAKAWV--NTVAETFS-DHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGK 156
R+ ++WV N V + + D W ++ E LK P T+ L+ K
Sbjct: 89 RRRSFRSWVTHNLVIDMLAKDDGFDTYW----KILEELKNSNIQIPPP-TFSVLIAAYAK 143
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
SG E A + F +M + G +P Y ++L + + A NQM L N P+
Sbjct: 144 SGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKL-NYNPNRA 202
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
T+ L+ + + ++ +M ++ + PNT+ I+L G +A D + R+L+ M
Sbjct: 203 TFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTM 262
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
S C PD T N +L F GQ+D + F G + ++ LI + +
Sbjct: 263 KVSGCC-PDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKR 321
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
YD++ M K Y +I F ++G + M G+ DT +
Sbjct: 322 YDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNA 381
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSF-----YNAVISACIKADDLMEMERVYKR 451
LI G+ + GL K S +L+I++N F Y +I + L E +++ +
Sbjct: 382 LIKGFCDVGLLDKARS-----LQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQ 436
Query: 452 MKEKHCRPDSETFSIMTEAYAKEG 475
M+ C P TF+ + + K G
Sbjct: 437 MENLGCSPSIMTFNALIDGLCKAG 460
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 172/407 (42%), Gaps = 55/407 (13%)
Query: 118 HVL--KKQWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG 174
HV+ K+ + AL V+ +MLK Y P T++ LL L K+G+ + A K+F+EM ++G
Sbjct: 174 HVMVQKEVFLLALAVYNQMLKLN--YNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKG 231
Query: 175 IEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT----------------- 217
I P +YT +L+ C+ D+ LN MK + C PD T
Sbjct: 232 IPPNTMIYTIILSGLCQAKRTDDVHRLLNTMK-VSGCCPDSITCNALLDGFCKLGQIDEA 290
Query: 218 ------------------YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
YS+LI A R++ ++ + M + + P+ V I++ G
Sbjct: 291 FALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRG 350
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ + GM D +L+ M + PD + N ++ F + G +D + P
Sbjct: 351 FCEVGMVDYALNMLNDMTQRGL-SPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFP 409
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ T+ ILI + + D+ + M L + T+N +I+ G+ + + F
Sbjct: 410 TSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLF 469
Query: 380 EQMH-----------AEGMK--ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
+M ++G DT + ++ +GL K + + + ++
Sbjct: 470 YKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDI 529
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
YN +I+ KA ++ ++++ ++ K PDS T+ + + + +
Sbjct: 530 MTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHR 576
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 138/315 (43%), Gaps = 2/315 (0%)
Query: 165 KVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
K+ E+ I+ P ++ L+AAY ++ + ++A + +MK C+PDV+TY++++
Sbjct: 117 KILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDF-GCKPDVFTYNSILHV 175
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
V F L +Y M + + PN T I+L G K G D ++ M + P
Sbjct: 176 MVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGI-PP 234
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
+ ILS + D + R + G P++ T N L+ + K D+ +++
Sbjct: 235 NTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALL 294
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
+ K + Y+++I+ ++ +M G++ D + LI G+
Sbjct: 295 QLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEV 354
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
G+ ++ + ++ ++ + YNA+I L + + + + C P S T+
Sbjct: 355 GMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTY 414
Query: 465 SIMTEAYAKEGMNDK 479
+I+ + G+ D+
Sbjct: 415 TILICGMCRNGLLDE 429
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 138/348 (39%), Gaps = 60/348 (17%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
N + + F + F LQ+FE ++ + +G Y L+ L ++ + + ++
Sbjct: 275 NALLDGFCKLGQIDEAFALLQLFE---KEGYVLGIKG-YSSLIDGLFRAKRYDEVQEWCR 330
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
+M + GIEP LYT L+ +C ++D A LN M T PD Y Y+ LIK D
Sbjct: 331 KMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDM-TQRGLSPDTYCYNALIKGFCDV 389
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
+ +L ++ + P + T I++ G + G+ D+ ++ + M E+ C P + T
Sbjct: 390 GLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQM-ENLGCSPSIMT 448
Query: 289 MNTILSVFANKGQVD------------------------------------MMERWYE-- 310
N ++ G+++ M+ER E
Sbjct: 449 FNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESG 508
Query: 311 ----------KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW---TSS 357
+ + G+ P+ T+N+LI + K + ++ + R+LQ S
Sbjct: 509 LILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAK---NINGAFKLFRELQLKGHSPDSV 565
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
TY +I+ F + + +QM G + + CL+ G
Sbjct: 566 TYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKG 613
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 96/232 (41%), Gaps = 3/232 (1%)
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
T ++++ Y K+GM ++ G ++ CKPDV+T N+IL V K + Y +
Sbjct: 133 TFSVLIAAYAKSGMAEKAVESF-GKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQ 191
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
+P TF IL+ K D + + M + P + Y ++
Sbjct: 192 MLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKR 251
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNA 431
+ M G D+ T L++G+ G + + ++L K + Y++
Sbjct: 252 TDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSS 311
Query: 432 VISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+I +A E++ ++M + PD ++I+ + + GM D YAL
Sbjct: 312 LIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVD--YAL 361
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 82/210 (39%), Gaps = 5/210 (2%)
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T N ++ + A D + E+ +N I TF++LI AY K M +K M
Sbjct: 98 THNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKM 157
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
+ TYN+++ + QM + TF L+NG G
Sbjct: 158 KDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKT 217
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ ++ I N Y ++S +A ++ R+ MK C PDS T + +
Sbjct: 218 DDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNAL 277
Query: 468 TEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
+ + K G D+ +AL Q L E G+
Sbjct: 278 LDGFCKLGQIDEAFALLQ-----LFEKEGY 302
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 106/255 (41%), Gaps = 53/255 (20%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
N + + F D L + ++LQ+ E+ K F P TY L+ + ++G + AR++FN
Sbjct: 380 NALIKGFCDVGLLDKA-RSLQL-EISKNDCF--PTSCTYTILICGMCRNGLLDEARQIFN 435
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEA---------------FVTLNQ--------- 204
+M G P+ + AL+ C+ ++EA F+ L+Q
Sbjct: 436 QMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTA 495
Query: 205 -MKTLPN--CQ--------------------PDVYTYSTLIKACVDAMRFELIETLYQDM 241
++T+ C+ PD+ TY+ LI A L++++
Sbjct: 496 SLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFREL 555
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ +P++VT ++ G+ + + RVL M+++ C P +++ KG+
Sbjct: 556 QLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNG-CTPSSAVYKCLMTWSCRKGK 614
Query: 302 VDM-MERWYEKFRNF 315
+ + W + R+
Sbjct: 615 LSVAFSLWLKYLRSL 629
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 160/384 (41%), Gaps = 20/384 (5%)
Query: 100 RKAKAKAWV--NTVAETFS-DHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGK 156
R+ ++WV N V + + D W ++ E LK P T+ L+ K
Sbjct: 89 RRRSFRSWVTHNLVIDMLAKDDGFDTYW----KILEELKNSNIQIPPP-TFSVLIAAYAK 143
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
SG E A + F +M + G +P Y ++L + + A NQM L N P+
Sbjct: 144 SGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKL-NYNPNRA 202
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
T+ L+ + + ++ +M ++ + PNT+ I+L G +A D + R+L+ M
Sbjct: 203 TFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTM 262
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
S C PD T N +L F GQ+D + F G + ++ LI + +
Sbjct: 263 KVSGCC-PDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKR 321
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
YD++ M K Y +I F ++G + M G+ DT +
Sbjct: 322 YDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNA 381
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSF-----YNAVISACIKADDLMEMERVYKR 451
LI G+ + GL K S +L+I++N F Y +I + L E +++ +
Sbjct: 382 LIKGFCDVGLLDKARS-----LQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQ 436
Query: 452 MKEKHCRPDSETFSIMTEAYAKEG 475
M+ C P TF+ + + K G
Sbjct: 437 MENLGCSPSIMTFNALIDGLCKAG 460
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 138/315 (43%), Gaps = 2/315 (0%)
Query: 165 KVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
K+ E+ I+ P ++ L+AAY ++ + ++A + +MK C+PDV+TY++++
Sbjct: 117 KILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDF-GCKPDVFTYNSILHV 175
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
V F L +Y M + + PN T I+L G K G D ++ M + P
Sbjct: 176 MVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGI-PP 234
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
+ ILS + D + R + G P++ T N L+ + K D+ +++
Sbjct: 235 NTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALL 294
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
+ K + Y+++I+ ++ +M G++ D + LI G+
Sbjct: 295 QLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEV 354
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
G+ ++ + ++ ++ + YNA+I L + + + + C P S T+
Sbjct: 355 GMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTY 414
Query: 465 SIMTEAYAKEGMNDK 479
+I+ + G+ D+
Sbjct: 415 TILICGMCRNGLLDE 429
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 131/304 (43%), Gaps = 45/304 (14%)
Query: 118 HVL--KKQWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG 174
HV+ K+ + AL V+ +MLK Y P T++ LL L K+G+ + A K+F+EM ++G
Sbjct: 174 HVMVQKEVFLLALAVYNQMLKLN--YNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKG 231
Query: 175 IEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT----------------- 217
I P +YT +L+ C+ D+ LN MK + C PD T
Sbjct: 232 IPPNTMIYTIILSGLCQAKRTDDVHRLLNTMK-VSGCCPDSITCNALLDGFCKLGQIDEA 290
Query: 218 ------------------YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
YS+LI A R++ ++ + M + + P+ V I++ G
Sbjct: 291 FALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRG 350
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ + GM D +L+ M + PD + N ++ F + G +D + P
Sbjct: 351 FCEVGMVDYALNMLNDMTQRGL-SPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFP 409
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG---DAKHME 376
+ T+ ILI + + D+ + M L + T+N +I+ G +A+H+
Sbjct: 410 TSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLF 469
Query: 377 YTFE 380
Y E
Sbjct: 470 YKME 473
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 96/232 (41%), Gaps = 3/232 (1%)
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
T ++++ Y K+GM ++ G ++ CKPDV+T N+IL V K + Y +
Sbjct: 133 TFSVLIAAYAKSGMAEKAVESF-GKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQ 191
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
+P TF IL+ K D + + M + P + Y ++
Sbjct: 192 MLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKR 251
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNA 431
+ M G D+ T L++G+ G + + ++L K + Y++
Sbjct: 252 TDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSS 311
Query: 432 VISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+I +A E++ ++M + PD ++I+ + + GM D YAL
Sbjct: 312 LIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVD--YAL 361
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 82/210 (39%), Gaps = 5/210 (2%)
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T N ++ + A D + E+ +N I TF++LI AY K M +K M
Sbjct: 98 THNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKM 157
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
+ TYN+++ + QM + TF L+NG G
Sbjct: 158 KDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKT 217
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ ++ I N Y ++S +A ++ R+ MK C PDS T + +
Sbjct: 218 DDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNAL 277
Query: 468 TEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
+ + K G D+ +AL Q L E G+
Sbjct: 278 LDGFCKLGQIDEAFALLQ-----LFEKEGY 302
>gi|297734042|emb|CBI15289.3| unnamed protein product [Vitis vinifera]
Length = 793
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 153/337 (45%), Gaps = 8/337 (2%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
N V + DH + AL F LK Q ++ TY ++ +LG++ Q K+
Sbjct: 359 NQVLKQIQDHPV------ALGFFYWLKRQTGFKHDGHTYTTMVGILGRARQFGAINKLLA 412
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
EMV +G +P Y L+ +Y R + ++EA ++M+ CQPD TY TLI A
Sbjct: 413 EMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQE-AGCQPDRVTYCTLIDIHAKA 471
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
++ +YQ M E ++P+T T ++++ GKAG ++ M++ C P++ T
Sbjct: 472 GFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQG-CVPNLVT 530
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
N ++++ A Y +N G P+ T++I++ G ++ ++ M+
Sbjct: 531 YNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMK 590
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
+ + Y +++ + +G+ + ++ M G+ + T L++ +
Sbjct: 591 RKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLS 650
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
+ ++ +L + ++ Y ++S C +A +M
Sbjct: 651 DAYNLLQSMLRLGLQPSLQTYTLLLSCCTEARSSFDM 687
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 115/264 (43%), Gaps = 3/264 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ VF+ ++E QP TY L+ + K+G ++A ++ +M E + P Y+ +
Sbjct: 441 EAVSVFDRMQEAGC-QPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVI 499
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + + A +M C P++ TY+ +I A + LY+DM
Sbjct: 500 INCLGKAGHLTSAHKLFCEMVD-QGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAG 558
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ VT +IV+ G G ++ E + + M + PD ++ ++ G V+
Sbjct: 559 FQPDKVTYSIVMEVLGHCGHLEEAEAIFTEM-KRKNWVPDEPVYGLLVDLWGKVGNVEKS 617
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
WY+ N G+ P T N L+ A+ + ++++ M +L + TY ++
Sbjct: 618 WEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTLLLSC 677
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKA 389
++ + M + E M G A
Sbjct: 678 CTEARSSFDMGFCGELMAVTGHPA 701
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 83/197 (42%), Gaps = 2/197 (1%)
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
L + C D + N +L + W + R G + T+ ++G G+ R
Sbjct: 346 LRNLNCLMDAYQANQVLKQIQDHPVALGFFYWLK--RQTGFKHDGHTYTTMVGILGRARQ 403
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
+ ++ ++ M + TYN +I ++ F++M G + D T+C
Sbjct: 404 FGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCT 463
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
LI+ +A AG + + + ++ + Y+ +I+ KA L +++ M ++
Sbjct: 464 LIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQG 523
Query: 457 CRPDSETFSIMTEAYAK 473
C P+ T++IM AK
Sbjct: 524 CVPNLVTYNIMIALQAK 540
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 89/207 (42%), Gaps = 6/207 (2%)
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
K D T T++ + Q + + + G P T+N LI +YG+ ++ S
Sbjct: 385 KHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEAVS 444
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
V + M++ TY +I+ + G + +++M + DT T+ +IN
Sbjct: 445 VFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLG 504
Query: 403 NAGLFHKVISSVRLASKL---QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
AG + S+ +L ++ N+ YN +I+ KA + +Y+ M+ +P
Sbjct: 505 KAG---HLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQP 561
Query: 460 DSETFSIMTEAYAKEGMNDKVYALEQE 486
D T+SI+ E G ++ A+ E
Sbjct: 562 DKVTYSIVMEVLGHCGHLEEAEAIFTE 588
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 14/180 (7%)
Query: 315 FGIDPETRTFNILIGAYGK-----KRMYDKMS---SVMEYMRKLQFPWTSSTYNNVIEAF 366
GI P +R F G+ G R+ ++S + E +R L + N V++
Sbjct: 310 IGIAPVSRQF----GSSGHVVENVSRILRQLSWGPAAEEALRNLNCLMDAYQANQVLKQI 365
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
D A Y ++ G K D T+ ++ A F + + + NV
Sbjct: 366 QDHPVALGFFYWLKRQ--TGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNV 423
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
YN +I + +A+ L E V+ RM+E C+PD T+ + + +AK G D + Q+
Sbjct: 424 VTYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQK 483
>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 621
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 163/362 (45%), Gaps = 10/362 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A VF L E+ ++P TY L+ L + + + + +++ + G++P L A+
Sbjct: 78 EAQAVFHNLTEEG-HKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAM 136
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMR----FELIETLYQDM 241
+ A+ + +DEA +MK C+P TY+TLIK R +L+E + QD
Sbjct: 137 INAFSDSGKVDEAMKIFQKMKEY-GCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQD- 194
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+V PN T NI++ + ++ VL M+ S +PDV T NT+ +A G+
Sbjct: 195 --ENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGI-QPDVVTYNTMARAYAQNGE 251
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ ER K + + P RT I+I Y K+ + + M++L +N+
Sbjct: 252 TEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNS 311
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+I+ + D D ++ M G+K D TF ++N +++AGL K
Sbjct: 312 LIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAG 371
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
I ++ Y+ + ++A + E + M + + + F+ + + G D+ +
Sbjct: 372 IEPDIHAYSILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAF 431
Query: 482 AL 483
+L
Sbjct: 432 SL 433
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 160/370 (43%), Gaps = 7/370 (1%)
Query: 108 VNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
+N + FSD + +A+++F+ +KE +P TY L+ G G+P + K+
Sbjct: 133 LNAMINAFSD---SGKVDEAMKIFQKMKEYGC-KPTTSTYNTLIKGFGIVGRPYESMKLL 188
Query: 168 NEM-VEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
M +E ++P Y L+ A+C ++EA+ L++M QPDV TY+T+ +A
Sbjct: 189 EMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKM-VASGIQPDVVTYNTMARAYA 247
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
E E L M V PN T I++ GY K G + R L M E P+
Sbjct: 248 QNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGV-HPNP 306
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
N+++ + + + ++ FGI P+ TF+ ++ A+ + D +
Sbjct: 307 VVFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFND 366
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M K Y+ + + + G + E M G++ + F +I+G+ AG
Sbjct: 367 MVKAGIEPDIHAYSILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGK 426
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ S ++ + N+ Y +I +A + E + M+E+ P+ T +
Sbjct: 427 MDRAFSLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEEILSTMEERGVVPEMSTMQL 486
Query: 467 MTEAYAKEGM 476
+ +A+ G+
Sbjct: 487 VADAWRAIGL 496
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 146/331 (44%), Gaps = 2/331 (0%)
Query: 153 LLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQ 212
L+GK G+P A+ VF+ + EEG +PT YT L+AA R L+++ +
Sbjct: 70 LIGK-GKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVAD-NGMK 127
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
PD + +I A D+ + + ++Q M E P T T N ++ G+G G + ++
Sbjct: 128 PDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKL 187
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
L M + KP+ T N ++ + K +++ K GI P+ T+N + AY
Sbjct: 188 LEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYA 247
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
+ +K ++ M+ + T +I + G+ +M G+ +
Sbjct: 248 QNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPV 307
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
F LI GY +A + V ++ L + I +V ++ +++A A + E ++ M
Sbjct: 308 VFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDM 367
Query: 453 KEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ PD +SI+ + Y + G K +L
Sbjct: 368 VKAGIEPDIHAYSILAKGYVRAGQPRKAESL 398
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 7/196 (3%)
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
+++ KG+ + + G P T+ L+ A +++ + + +++ +
Sbjct: 66 LMNALIGKGKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNG 125
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
S N +I AFSD G F++M G K T T+ LI G+ G+ +
Sbjct: 126 MKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGF---GIVGRPY 182
Query: 412 SSVRLASKLQIAENVS----FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
S++L + ENV YN +I A L E V +M +PD T++ M
Sbjct: 183 ESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTM 242
Query: 468 TEAYAKEGMNDKVYAL 483
AYA+ G +K L
Sbjct: 243 ARAYAQNGETEKAERL 258
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
++GQP A + M + G++ ++T +++ +C +D AF +M + P++
Sbjct: 388 RAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEM-GTSPNL 446
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
TY TLI +A + E + M+ER V P T +V + G+F + R+L+G
Sbjct: 447 KTYETLIWGYGEAKQPWKAEEILSTMEERGVVPEMSTMQLVADAWRAIGLFKEANRILNG 506
>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
Length = 414
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 159/395 (40%), Gaps = 53/395 (13%)
Query: 94 LKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVL 153
L K E + +A+ + S + + + + +FE + Y P ++ ++
Sbjct: 34 LSKASEFGCRVEAYAYN--KLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKG 91
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
+ + GQ + A ++ M E G P + L+ CR + + L +++ C P
Sbjct: 92 VCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMP 151
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------MF 266
+V T++++I A + E +Y DM + PNTVT N+++ GYGK G ++
Sbjct: 152 NVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVY 211
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
QM R+ C PDV T ++++ + GQ+D R + I P TF+I
Sbjct: 212 QQMTRL--------RCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSI 263
Query: 327 LIGAYGKKRMYDKMSSVM-EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
+I + K+ D+ ++ E + + YN VI+ G + M +
Sbjct: 264 IIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEK 323
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G + D T+ LI GY K +I+E + F++
Sbjct: 324 GCRPDKYTYTILIIGY---------------CMKSRISEAIMFFH--------------- 353
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
M E C PDS T + K GM ++V
Sbjct: 354 -----EMVEAGCSPDSITVNCFISCLLKAGMPNEV 383
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 114/278 (41%), Gaps = 7/278 (2%)
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
PD S L+ +C A + TL E N ++ G + +
Sbjct: 9 PDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVAL 68
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
++ PDVW+ N ++ GQV E+ FG P+T T NIL+
Sbjct: 69 FERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLC 128
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTS----STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
+ +++S E +R+LQ T+ +VI + G + + M A G+
Sbjct: 129 RT---NEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIM 185
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
+T T+ LINGY G + + ++L+ +V ++++I + L + R+
Sbjct: 186 PNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRI 245
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ M + +P+ TFSI+ + K+ +D+ L E
Sbjct: 246 WSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNE 283
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 3/167 (1%)
Query: 108 VNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
V T + + Q AL+++ + + QP T+ ++ L K + + A +
Sbjct: 223 VVTFSSLIDGYCRCGQLDDALRIWSDMAQHRI-QPNVYTFSIIIHSLCKQNRSDEAIGLL 281
Query: 168 NEM-VEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
NE+ + I P +Y ++ C+ +DEA + M+ C+PD YTY+ LI
Sbjct: 282 NELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEE-KGCRPDKYTYTILIIGYC 340
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
R + +M E +P+++T N + KAGM ++++ V+
Sbjct: 341 MKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVM 387
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 164/368 (44%), Gaps = 10/368 (2%)
Query: 113 ETFSDHVLKKQ--WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEM 170
E+ H L+++ ALQ F+ L ++ TY ++ LG++ + + + ++M
Sbjct: 40 ESHVAHALRREPNVLYALQHFQYLTNTLAFKHTPLTYHVMIEKLGRNSELDALHYILHQM 99
Query: 171 VEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV--DA 228
E I + + + +L +Y + L D A ++K C+P V Y+ L+ A +
Sbjct: 100 KIERIPCSQDSFICVLNSYKNSGLGDRALKMFYRIKEF-GCKPTVKIYNHLLDALLGESG 158
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
+F +I +Y++M + PN T N++L K G D ++L M + C PD +
Sbjct: 159 NKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRG-CVPDGVS 217
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
T+++ G+V E E R FG + N LI ++ ++ +M+ M
Sbjct: 218 YTTVVAAMCEDGRV---EEAREVARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMV 274
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
+Y++VI SD+G+ + +M G + + TF L+ GY G
Sbjct: 275 GNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVG 334
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM-KEKHCRPDSETFSIM 467
+ + R+ + NV YN +++ + +L E V RM K+ CRP+ T+S +
Sbjct: 335 EGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTL 394
Query: 468 TEAYAKEG 475
+ K G
Sbjct: 395 VHGFVKAG 402
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 142/326 (43%), Gaps = 1/326 (0%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
L+ L + G+ + +EMV G++P Y+++++ ++ A L +M
Sbjct: 253 LICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKM-IRR 311
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
C+P+V+T+S+L+K R L++ M V PN V N +L G +G +
Sbjct: 312 GCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEA 371
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
V M + C+P+V T +T++ F G + + K N G+ P + ++
Sbjct: 372 VDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVD 431
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
K M+D+ +++ M P T T+N I+ G +QM G
Sbjct: 432 VLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLP 491
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
DT+T+ L++G + + +R + ++ N+ YN V+ + +V
Sbjct: 492 DTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVL 551
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEG 475
RM +PD+ T +++ AY+K G
Sbjct: 552 GRMLVNGVKPDAITVNVVIYAYSKLG 577
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 111/225 (49%), Gaps = 5/225 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ V +++ F +P TY L+ K+G + A +V+N+MV G+ P +YT++
Sbjct: 370 EAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSM 429
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+NS+ D+A+ ++ M T C P V T++T IK R + M
Sbjct: 430 VDVLCKNSMFDQAYRLIDNMAT-DGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYG 488
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+T T N +L G + ++ LE + ++ T NT++ F++ G+ + +
Sbjct: 489 CLPDTRTYNELLDGLFSVNELKEACELIR-ELEERKVELNLVTYNTVMYGFSSHGKEEWV 547
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
+ + G+ P+ T N++I AY K K+ + ++++ ++
Sbjct: 548 LQVLGRMLVNGVKPDAITVNVVIYAYSK---LGKVRTAIQFLDRI 589
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 149/363 (41%), Gaps = 48/363 (13%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLL-VLLGKSGQP-ELARKVFNEMVEEGIEPTPELYT 183
+AL++F +KE +P Y LL LLG+SG + V+ M EG+EP Y
Sbjct: 126 RALKMFYRIKEFGC-KPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYN 184
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
LL A C+N +D A L +M C PD +Y+T++ A + R E + +
Sbjct: 185 VLLKALCKNGKLDGACKLLVEMSK-RGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGA 243
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
V N ++ G + G ++ ++ M+ + P+V + ++++S ++ G+V+
Sbjct: 244 EGVVS---VCNALICGLCREGRVGEVFGLMDEMVGNGV-DPNVVSYSSVISWLSDVGEVE 299
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAY--GKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ K G P TF+ L+ Y G +
Sbjct: 300 LALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGR--------------------------- 332
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-LFHKVISSVRLASKL 420
+G+ + + M EG++ + + L+NG +G L V R+
Sbjct: 333 -------VGEGVGL---WRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDC 382
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
NV+ Y+ ++ +KA DL V+ +M RP+ ++ M + K M D+
Sbjct: 383 FCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQA 442
Query: 481 YAL 483
Y L
Sbjct: 443 YRL 445
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 2/139 (1%)
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
L F T TY+ +IE + + Y QM E + +F C++N Y N+GL +
Sbjct: 67 LAFKHTPLTYHVMIEKLGRNSELDALHYILHQMKIERIPCSQDSFICVLNSYKNSGLGDR 126
Query: 410 VISSVRLASKLQIAENVSFYNAVISACI--KADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ + V YN ++ A + + + VY+ M+ + P+ T++++
Sbjct: 127 ALKMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVL 186
Query: 468 TEAYAKEGMNDKVYALEQE 486
+A K G D L E
Sbjct: 187 LKALCKNGKLDGACKLLVE 205
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 170/369 (46%), Gaps = 5/369 (1%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
+Q + L++ E L+ + +P + TY ++ L K+G+ A +V M + I P +
Sbjct: 301 EQLGKVLKLMEELQRKGL-KPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVV 359
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
YT L++ + ++ + + ++MK PD TY+++I A + L+ +M
Sbjct: 360 YTTLISGFGKSGNVSVEYKLFDEMKR-KKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEM 418
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ + P+ VT ++ GY KAG + + + M+E P+V T ++ G+
Sbjct: 419 LSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGL-TPNVVTYTALVDGLCKCGE 477
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
VD+ + G+ P T+N LI K ++ +ME M F + TY
Sbjct: 478 VDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTT 537
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+++A+ MG+ M +G++ TF L+NG+ +G+ ++
Sbjct: 538 IMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKG 597
Query: 422 IAENVSFYNAVISA-CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
I N + +N+++ CI+ + +E +YK M + PD+ T++I+ + + K +
Sbjct: 598 IMPNATTFNSLMKQYCIRNNMRATIE-IYKGMHAQGVVPDTNTYNILIKGHCKARNMKEA 656
Query: 481 YALEQEKLQ 489
+ L +E ++
Sbjct: 657 WFLHKEMVE 665
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 125/253 (49%), Gaps = 2/253 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L K G+ ++A ++ +EM E+G++P Y AL+ C+ I++A
Sbjct: 460 PNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKL 519
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ +M L PD TY+T++ A L + M ++ + P VT N+++ G+
Sbjct: 520 MEEMD-LAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFC 578
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+GM + ER++ ML+ P+ T N+++ + + + Y+ G+ P+T
Sbjct: 579 MSGMLEDGERLIKWMLDKGI-MPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDT 637
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+NILI + K R + + + M + F T+++YN++I+ F + FE+
Sbjct: 638 NTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEE 697
Query: 382 MHAEGMKADTKTF 394
M G A+ + +
Sbjct: 698 MRTHGFIAEKEIY 710
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 142/328 (43%), Gaps = 9/328 (2%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSL--IDEAFVTLNQMKTLPNCQPDVYTYST 220
A K+F++++ G+ + + L A NS I AF + + C V +Y+
Sbjct: 200 AGKLFDKLLNYGVLVSVD-SCNLFLARLSNSFDGIRTAFRVFREYSEVGVCWNTV-SYNI 257
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM--LE 278
++ + + +L M+ R P+ V+ ++++ GY + +Q+ +VL M L+
Sbjct: 258 ILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQV---EQLGKVLKLMEELQ 314
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
KP+ +T N+I+S G+V E+ +N I P+ + LI +GK
Sbjct: 315 RKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVS 374
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+ + M++ + TY ++I G F +M ++G+K D T+ LI
Sbjct: 375 VEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALI 434
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
+GY AG + S + + NV Y A++ K ++ + M EK +
Sbjct: 435 DGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQ 494
Query: 459 PDSETFSIMTEAYAKEGMNDKVYALEQE 486
P+ T++ + K G ++ L +E
Sbjct: 495 PNVCTYNALINGLCKVGNIEQAVKLMEE 522
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 153/348 (43%), Gaps = 15/348 (4%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L + G+ E+A ++++M++EG+ P Y AL+ C A
Sbjct: 335 RPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALK 394
Query: 201 TLNQMK---TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVL 257
+ M+ +L N Q TY+ +IK E L++ M + P VT N ++
Sbjct: 395 IFHWMEGHGSLANTQ----TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLI 450
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
GY G + R+L M E+ C+PD WT N ++S F+ G+++ ++++ G+
Sbjct: 451 NGYLTKGNVNNAARLLDLMKENG-CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 509
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
+P ++ LI + K D S+++ M ++ +YN VI S E
Sbjct: 510 NPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEK 569
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
++M +G+ + T+ LI+G G K + N+ Y+++I
Sbjct: 570 ICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 629
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
+ E E RM E C P +T+S + ++G + Y EQ
Sbjct: 630 QEGKADEAE----RMSEIGCEPTLDTYSTLVSGLCRKG---RFYEAEQ 670
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 139/335 (41%), Gaps = 37/335 (11%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP T+ L+ +L K G+ A + +++ + + P YT+L+ +CRN +D AF
Sbjct: 195 QPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFG 254
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
++M C P+ TYSTLI + R + + ++M E+ + P T + +
Sbjct: 255 VFDRM-VKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITAL 313
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
++ +++ M + C+P+V T ++S + G++++ Y K G+ P
Sbjct: 314 CAIEHEEEAIELVARM-KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 372
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T T+N LI + + +M + TYN +I+ GD + FE
Sbjct: 373 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 432
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M G T+ LINGY G NV+ NA
Sbjct: 433 KMLKMGPLPTVVTYNTLINGYLTKG-------------------NVN--NAA-------- 463
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
R+ MKE C PD T++ + ++K G
Sbjct: 464 ------RLLDLMKENGCEPDEWTYNELVSGFSKWG 492
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 137/332 (41%), Gaps = 40/332 (12%)
Query: 108 VNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
V T + ++ K A ++ +++KE +P E TY +L+ K G+ E A F
Sbjct: 443 VVTYNTLINGYLTKGNVNNAARLLDLMKENGC-EPDEWTYNELVSGFSKWGKLESASFYF 501
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL---PNCQ------------ 212
EMVE G+ P P YTAL+ + ++ +D A L +M+ + PN +
Sbjct: 502 QEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKE 561
Query: 213 -------------------PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQ 253
P+V TY+TLI R + ++ DM++R PN T
Sbjct: 562 NRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTY 621
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
+ ++ G + G D+ ER + C+P + T +T++S KG+ E+ + +
Sbjct: 622 SSLIYGLCQEGKADEAER-----MSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMK 676
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
G P+ + L+ A+ K D + + F S Y +I A G +
Sbjct: 677 ERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVE 736
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
+ F+ M + AD + L++G G
Sbjct: 737 EAQALFDNMLEKEWNADEIVWTVLVDGLLKEG 768
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/384 (20%), Positives = 156/384 (40%), Gaps = 28/384 (7%)
Query: 111 VAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEM 170
VAE + H K +Q F + ++PFY+ ++ +L N +
Sbjct: 78 VAEIVAVH---KDTESVIQFFYWISKRPFYKHNMNCFISML----------------NRL 118
Query: 171 VEEGIEPTPELYTALLAAYCRNSL-IDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM 229
V + + + L+ CRN I LN++ + +Y+ +TL+ +
Sbjct: 119 VRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGM-GFGFSLYSCNTLL---IQLA 174
Query: 230 RFELIE---TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
+FE++E LY+ M + P+ +T N ++ K G + E +LS + + PDV
Sbjct: 175 KFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDL-SPDV 233
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
+T +++ +D+ +++ G DP + T++ LI + D+ ++E
Sbjct: 234 FTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEE 293
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M + T TY I A + + +M G + + +T+ LI+G + G
Sbjct: 294 MIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGK 353
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
I K + N YNA+I+ +++ M+ +++T++
Sbjct: 354 LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNE 413
Query: 467 MTEAYAKEGMNDKVYALEQEKLQM 490
+ + G +K L ++ L+M
Sbjct: 414 IIKGLCLGGDIEKAMVLFEKMLKM 437
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 2/148 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L + G+ A ++ +M E G P E+Y +LL A+C+N +D A
Sbjct: 646 EPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALK 705
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ ++ Q + Y LI A A + E + L+ +M E+ + + +++ G
Sbjct: 706 IFHSIEA-KGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGL 764
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWT 288
K G D ++L ++ES P++ T
Sbjct: 765 LKEGELDLCMKLLH-IMESKNFTPNIQT 791
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 156/357 (43%), Gaps = 15/357 (4%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+ L + E ++ Q P TY L+ K+G+ E +++F+EM +EG+ P L
Sbjct: 401 EGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTL 460
Query: 186 LAAYCRNSLIDEA--FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
+ CR + A F Q + + + D TY+ LI A + FE L+ +M +
Sbjct: 461 VGGMCRTGRVSSAVNFFVEAQRRGM---KGDAVTYTALINAFCNVNNFEKAMELFNEMLK 517
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+P+ + ++ G+ +AG VL+ L+ +PD NT++ F +
Sbjct: 518 SGCSPDAIVYYTLISGFSQAGRMADASFVLAE-LKKLGIRPDTVCYNTLIGGFCRTNKFH 576
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS-VMEYMRKLQFPWTSSTYNNV 362
+ ++ G+ P+T T+N LI AY K K + VM M K T +TY V
Sbjct: 577 RVFEMLKEMEEAGLKPDTITYNTLI-AYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAV 635
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEG-MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
I A+ G+ F+ M A + +T + LIN +KV S+V L ++
Sbjct: 636 INAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKN---NKVKSAVSLMEDMK 692
Query: 422 I---AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
I N + YNA+ DL ++ RM E C PD T I+TE + G
Sbjct: 693 IWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVG 749
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 144/334 (43%), Gaps = 9/334 (2%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK--- 206
LL L + G ++ +MVE I+P + L+ C+ +D+A L +M
Sbjct: 311 LLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGK 370
Query: 207 ----TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM-DERSVTPNTVTQNIVLGGYG 261
+ +PDV Y+TLI R + L + M ++ P+T+T N ++ G+
Sbjct: 371 ESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFC 430
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
KAG ++ + + M + P+V T+NT++ G+V ++ + + G+ +
Sbjct: 431 KAGEIEKGKELFDEMNKEGVA-PNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDA 489
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+ LI A+ ++K + M K + Y +I FS G + +
Sbjct: 490 VTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAE 549
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
+ G++ DT + LI G+ FH+V ++ + + + YN +I+ K D
Sbjct: 550 LKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGD 609
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
L ++V ++M + P T+ + AY G
Sbjct: 610 LKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNG 643
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 135/316 (42%), Gaps = 23/316 (7%)
Query: 175 IEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELI 234
+EP +Y L+ C+ E + +M++ C PD TY+ LI A E
Sbjct: 379 VEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKG 438
Query: 235 ETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------MFDQMERVLSGMLESATCKPDVW 287
+ L+ +M++ V PN VT N ++GG + G F + +R GM K D
Sbjct: 439 KELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQR--RGM------KGDAV 490
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK-RMYDKMSSVMEY 346
T +++ F N + + + G P+ + LI + + RM D S V+
Sbjct: 491 TYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADA-SFVLAE 549
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
++KL + YN +I F + ++M G+K DT T+ LI + G
Sbjct: 550 LKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGD 609
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISA-CIKADDLMEMERVYKRMK-EKHCRPDSETF 464
+R K + V+ Y AVI+A C+ + ME ++K MK P++ +
Sbjct: 610 LKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAME-IFKDMKAASKVPPNTVIY 668
Query: 465 SIMTEAYAKEGMNDKV 480
+I+ + K N+KV
Sbjct: 669 NILINSLCK---NNKV 681
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 3/182 (1%)
Query: 129 QVFEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+VFEMLKE + +P TY L+ K+G + A+KV +M++ G+ PT Y A++
Sbjct: 577 RVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVI 636
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
AYC N +EA MK P+ Y+ LI + + + +L +DM V
Sbjct: 637 NAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGV 696
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
TPNT T N + G +++ + M+E A C PD TM + + G+++ ++
Sbjct: 697 TPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHA-CNPDYITMEILTEWLSAVGEIERLK 755
Query: 307 RW 308
++
Sbjct: 756 KF 757
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 122/313 (38%), Gaps = 15/313 (4%)
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ CRN + + +M L + ++L+ F + L + M E
Sbjct: 276 LITRLCRNRKTNRGWDLFTEMIKL-GAVLESAACNSLLTGLAREGNFNRMNELMEKMVEM 334
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVL---SGMLESA----TCKPDVWTMNTILSVFA 297
+ PN VT I++ K D VL SG ES + +PDV NT++
Sbjct: 335 DIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLC 394
Query: 298 NKGQ----VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
G+ + +MER + G P+T T+N LI + K +K + + M K
Sbjct: 395 KVGRQQEGLGLMERMRSQK---GCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVA 451
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
T N ++ G F + GMK D T+ LIN + N F K +
Sbjct: 452 PNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMEL 511
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
K + + Y +IS +A + + V +K+ RPD+ ++ + + +
Sbjct: 512 FNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCR 571
Query: 474 EGMNDKVYALEQE 486
+V+ + +E
Sbjct: 572 TNKFHRVFEMLKE 584
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 110/270 (40%), Gaps = 29/270 (10%)
Query: 230 RFELIE---TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES---ATCK 283
R EL+E L+ D+D NT +N+ L ++G +V+ M ES + C+
Sbjct: 169 RSELVEESLILFNDLDPS--VKNTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCR 226
Query: 284 PDVWTMNTILSVFANKGQ------VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
P+ T + + S + + D + KF G+ + LI + R
Sbjct: 227 PNDATGDILFSFLLKRERNEELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKT 286
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
++ + M KL S+ N+++ + G+ M E+M ++ + TF L
Sbjct: 287 NRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGIL 346
Query: 398 INGYANAGLFHKVISSVRLASKL-----------QIAENVSFYNAVISACIKADDLMEME 446
IN F +V ++ + K+ + +V YN +I K E
Sbjct: 347 INHMCK---FRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGL 403
Query: 447 RVYKRMK-EKHCRPDSETFSIMTEAYAKEG 475
+ +RM+ +K C PD+ T++ + + + K G
Sbjct: 404 GLMERMRSQKGCAPDTITYNCLIDGFCKAG 433
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 128/253 (50%), Gaps = 2/253 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L K G+ + A ++ +EM ++G++ +Y +++ C+ I++A
Sbjct: 466 PNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKL 525
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ +M+ + PD TY+T+I A + L Q+M +R + P VT N+++ G+
Sbjct: 526 MKEME-VAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFC 584
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
GM + +R+L MLE PD T NT++ + ++ + Y++ RN G+ P++
Sbjct: 585 MLGMLEDGDRLLGWMLEKGIV-PDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDS 643
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+NILI + K R + + + M + + T ++YN +I+ F FE+
Sbjct: 644 NTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEE 703
Query: 382 MHAEGMKADTKTF 394
M G+ AD + +
Sbjct: 704 MRGHGLVADGEIY 716
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 153/353 (43%), Gaps = 9/353 (2%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+WF EML ++ P TY L+ G+ G+ + +F+EM+ G++P Y
Sbjct: 384 KWFD-----EMLSKK--ISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTY 436
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
T L+ YC+ + AF N+M + P++ TY LI + L +M
Sbjct: 437 TTLIDVYCKAGEMVNAFSLHNEMVQM-GMTPNIVTYGALIDGLCKHGELDTANELLDEMR 495
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
++ + N N ++ G KAG +Q +++ M E A PD T T++ + G +
Sbjct: 496 KKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEM-EVAGIDPDAITYTTVIDAYCRLGDI 554
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
D + ++ + G+ P TFN+L+ + M + ++ +M + + TYN +
Sbjct: 555 DKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTL 614
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
++ +++M +G+ D+ T+ LI G+ A + + +
Sbjct: 615 MKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGY 674
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
V+ YNA+I K ++E +++ M+ D E ++ + +EG
Sbjct: 675 VPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEG 727
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 150/334 (44%), Gaps = 4/334 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY +++LL K G+ A KV EM+ + I P +YT L+ + + + A
Sbjct: 325 KPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANK 384
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
++M + PD TY+TLI+ + + L+ +M R + P+ VT ++ Y
Sbjct: 385 WFDEMLS-KKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVY 443
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
KAG + + M++ P++ T ++ G++D ++ R G+
Sbjct: 444 CKAGEMVNAFSLHNEMVQMGM-TPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLN 502
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+N ++ K ++ +M+ M + TY VI+A+ +GD +
Sbjct: 503 VCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQ 562
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA-CIKA 439
+M G++ TF L+NG+ G+ + + I + YN ++ CI+
Sbjct: 563 EMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIR- 621
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ + ++YKRM+ + PDS T++I+ + + K
Sbjct: 622 NSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCK 655
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 145/335 (43%), Gaps = 5/335 (1%)
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
E+A KVF E GI Y ++ + CR + EA L QM + PDV +YST
Sbjct: 243 EMAIKVF---CEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMD-FRSSTPDVVSYST 298
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
+I + L DM + + PN T N ++ K G + E+VL M+ S
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMM-SQ 357
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
PD T++ F G V +W+++ + I P+ T+ LI +G+ +
Sbjct: 358 KIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEP 417
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
++ M TY +I+ + G+ + +M GM + T+ LI+G
Sbjct: 418 QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDG 477
Query: 401 YANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
G + K + NV YN++++ KA ++ + ++ K M+ PD
Sbjct: 478 LCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPD 537
Query: 461 SETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
+ T++ + +AY + G DK + L QE L L+ +
Sbjct: 538 AITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPT 572
>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 532
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 140/326 (42%), Gaps = 1/326 (0%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
L+ ++G+ +LA+K+ E+ E + +Y LL + + EA +
Sbjct: 134 LVTSFAQAGKFDLAKKLIIEVQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFH 193
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+ P+ +T++ LI+ E L+ M P+ VT N ++ G KA D+
Sbjct: 194 S-PPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRA 252
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+L + C PDV T +I+S F G+++ +E+ GI+P TFN+LI
Sbjct: 253 CDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLID 312
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+GK ++ E M T+ ++I+ + GD + ++ M A +
Sbjct: 313 GFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSP 372
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
+ T+ +IN H+ +R + YN VI KA ++ E +
Sbjct: 373 NIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIV 432
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEG 475
M+EK CRPD TF+I+ + +G
Sbjct: 433 TEMEEKRCRPDKVTFTILIIGHCMKG 458
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 146/348 (41%), Gaps = 44/348 (12%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ L + G+ E ++FN M G P Y L++ C+ + +D A
Sbjct: 196 PNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDL 255
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L ++++ +C PDV TY+++I + E L+++M + P VT N+++ G+G
Sbjct: 256 LKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFG 315
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G E + M S +C PDV T +++ + G + + + ++ + + P
Sbjct: 316 KIGNMVAAEAMHEKM-ASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNI 374
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQ----FPWTSSTYNNVIEAFSDMGDAKHMEY 377
T++++I A K +++ + +R+L+ FP YN VI+ F G+
Sbjct: 375 YTYSVIINALCKD---NRIHEARDLLRQLKCSDVFP-KPFIYNPVIDGFCKAGNVDEANV 430
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
+M + + D TF LI G+ G R+ L I
Sbjct: 431 IVTEMEEKRCRPDKVTFTILIIGHCMKG---------RMVEALDI--------------- 466
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
+K+M C PD+ T S + K G + + + Q
Sbjct: 467 -----------FKKMLAIGCAPDNITISSLVACLLKAGKPSEAFHIVQ 503
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 89/228 (39%), Gaps = 37/228 (16%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPT---------------------- 178
P TY ++ K G+ E A +F EM+ GIEPT
Sbjct: 266 SPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEA 325
Query: 179 -----------PEL--YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC 225
P++ +T+L+ YCR I + MK N P++YTYS +I A
Sbjct: 326 MHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKA-RNVSPNIYTYSVIINAL 384
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
R L + + V P N V+ G+ KAG D+ +++ M E C+PD
Sbjct: 385 CKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEM-EEKRCRPD 443
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
T ++ KG++ ++K G P+ T + L+ K
Sbjct: 444 KVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDNITISSLVACLLK 491
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 344 MEYMRKLQFPWTS--STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
ME+ R L F STY +I + MG +E M ++G D++ L+ +
Sbjct: 80 MEFCR-LNFSLIHCFSTYELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSRVLGFLVTSF 138
Query: 402 ANAGLFHKVISSVRLASKLQI------AENVSF-YNAVISACIKADDLMEMERVYKRMKE 454
A AG F LA KL I A SF YN +++ +K + E ++K
Sbjct: 139 AQAGKFD-------LAKKLIIEVQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLA 191
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
H P++ TF+I+ + G +K + L
Sbjct: 192 FHSPPNTWTFNILIRGLCRVGEVEKGFEL 220
>gi|297792331|ref|XP_002864050.1| EMB1006 [Arabidopsis lyrata subsp. lyrata]
gi|297309885|gb|EFH40309.1| EMB1006 [Arabidopsis lyrata subsp. lyrata]
Length = 723
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 153/310 (49%), Gaps = 3/310 (0%)
Query: 165 KVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
++F +M ++G++ + +++ L+ ++C L +EA V +M+ + + Y+TL+ A
Sbjct: 330 EIFEKMSDKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEK-KGIRSNTIVYNTLMDA 388
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
+ E +E L+ ++ + + P T NI++ Y + D +E +L M E +P
Sbjct: 389 YNKSNHIEEVEGLFAEIKAKGLKPTAATYNILMDAYARRMQPDIVETLLREM-EDLGLEP 447
Query: 285 DVWTMNTILSVFA-NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
+V + ++S + K DM + + + G+ P + ++ LI AY ++K +
Sbjct: 448 NVKSFTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYAS 507
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
E M + TY ++++AF GD + + ++ M E +K T+ L++G+A
Sbjct: 508 FEEMWMEGIKPSVETYTSLLDAFRRSGDTEKLMEIWKLMLREKIKGTRITYNTLLDGFAK 567
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
GL+ + V K+ + +V YN +++A + ++ ++ K M + +PDS T
Sbjct: 568 QGLYIEARDVVSEFGKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSIT 627
Query: 464 FSIMTEAYAK 473
+S M A+ +
Sbjct: 628 YSTMIYAFVR 637
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 143/317 (45%), Gaps = 21/317 (6%)
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
G E A + EM ++GI +Y L+ AY +++ I+E ++K +P T
Sbjct: 358 GLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFAEIKA-KGLKPTAAT 416
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y+ L+ A M+ +++ETL ++M++ + PN + ++ YG+ M +
Sbjct: 417 YNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSFTCLISAYGRTKKMSDMAADAFLRM 476
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEK-FRNF------GIDPETRTFNILIGA 330
+ KP + ++ ++ G W+EK + +F GI P T+ L+ A
Sbjct: 477 KKVGLKPSSHSYTALIHAYSVSG-------WHEKAYASFEEMWMEGIKPSVETYTSLLDA 529
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG---DAKHMEYTFEQMHAEGM 387
+ + +K+ + + M + + T TYN +++ F+ G +A+ + F +M G+
Sbjct: 530 FRRSGDTEKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFGKM---GL 586
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
+ T+ L+N YA G K+ ++ + L + + Y+ +I A ++ D
Sbjct: 587 QPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFF 646
Query: 448 VYKRMKEKHCRPDSETF 464
+K M + PD ++
Sbjct: 647 YHKMMVKSGQVPDPRSY 663
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 118/258 (45%), Gaps = 9/258 (3%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR----NSLID 196
+P TY L+ + QP++ + EM + G+EP + +T L++AY R + +
Sbjct: 411 KPTAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSFTCLISAYGRTKKMSDMAA 470
Query: 197 EAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIV 256
+AF+ + ++ +P ++Y+ LI A + E +++M + P+ T +
Sbjct: 471 DAFLRMKKV----GLKPSSHSYTALIHAYSVSGWHEKAYASFEEMWMEGIKPSVETYTSL 526
Query: 257 LGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG 316
L + ++G +++ + ML K T NT+L FA +G +F G
Sbjct: 527 LDAFRRSGDTEKLMEIWKLMLREK-IKGTRITYNTLLDGFAKQGLYIEARDVVSEFGKMG 585
Query: 317 IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME 376
+ P T+N+L+ AY + K+ +++ M L S TY+ +I AF + D K
Sbjct: 586 LQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAF 645
Query: 377 YTFEQMHAEGMKADTKTF 394
+ + M G D +++
Sbjct: 646 FYHKMMVKSGQVPDPRSY 663
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 1/175 (0%)
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG-DAKHMEYT 378
+ R +N I + YD V E M K+ + T +I G AK +
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMNKINVFPDNVTCAIMITTMRKAGRSAKEVWEI 331
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
FE+M +G+K F L+ + + GL + + K I N YN ++ A K
Sbjct: 332 FEKMSDKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
++ + E+E ++ +K K +P + T++I+ +AYA+ D V L +E + LE
Sbjct: 392 SNHIEEVEGLFAEIKAKGLKPTAATYNILMDAYARRMQPDIVETLLREMEDLGLE 446
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 168/424 (39%), Gaps = 44/424 (10%)
Query: 108 VNTVAETFSDHVLKKQWF------QALQVFEMLKEQ-PFYQPKEGTYMKLLVLLGKSGQP 160
+ V + FS ++L K QA + M+ E P Y ++ K G
Sbjct: 178 LGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDV 237
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
A +F EMV+ GI P Y++++ A C+ +D+A L QM PD +TY+
Sbjct: 238 NKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVN-KGVLPDNWTYNN 296
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
LI +++ ++++M +S+ P+ V N ++G K G + V M
Sbjct: 297 LIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKG 356
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
PDV++ +L+ +A KG + M ++ GI P TFN+LI AY M DK
Sbjct: 357 Q-NPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKA 415
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+ MR TY VI A +G F QM +G+ D + CLI G
Sbjct: 416 MIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQG 475
Query: 401 YANAG----------------------LFHKVISSVRLASKLQIAENV------------ 426
+ G F +I+++ ++ A+N+
Sbjct: 476 FCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPD 535
Query: 427 -SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
YN ++ + + RV+ M P+ + + Y K G D+ +L +
Sbjct: 536 AVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFR 595
Query: 486 EKLQ 489
E LQ
Sbjct: 596 EMLQ 599
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 146/347 (42%), Gaps = 4/347 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ ++ +PELA F +++ G+ + + LL +C DEA
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS--VTPNTVTQNIVLGG 259
L C PDV++Y+ L+K+ + + + L + M E +P+ V N V+ G
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ K G ++ + M++ PD+ T ++++ +D E + + N G+ P
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGI-PPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 289
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ T+N LI Y + + V + MR+ N ++ + G K F
Sbjct: 290 DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVF 349
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
+ M +G D ++ ++NGYA G + L IA + +N +I A
Sbjct: 350 DTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANC 409
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALEQ 485
L + ++ M++ +P T+ + A + G M+D + Q
Sbjct: 410 GMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQ 456
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 148/365 (40%), Gaps = 5/365 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
QW +A++VF+ ++ Q P L+ L K G+ + AR VF+ M +G P Y
Sbjct: 306 QWKEAVRVFKEMRRQSIL-PDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 364
Query: 183 TALLAAYC-RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
T +L Y + L+D L + P + T++ LIKA + + ++ +M
Sbjct: 365 TIMLNGYATKGCLVD--MTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEM 422
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ V P+ VT V+ + G D + M++ PD + + ++ F G
Sbjct: 423 RDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVV-PDKYAYHCLIQGFCTHGS 481
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ + + N G+ + F +I K ++ + + + YN
Sbjct: 482 LLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNM 541
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+++ + +G + F+ M + G++ + + L+NGY G + +S R +
Sbjct: 542 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKG 601
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
I + YN +I +A + + + M E + T+SI+ K D+
Sbjct: 602 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAI 661
Query: 482 ALEQE 486
L +E
Sbjct: 662 FLFKE 666
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 137/336 (40%), Gaps = 4/336 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ G + A +FNEM + G++P Y ++AA CR +D+A
Sbjct: 394 PVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK 453
Query: 202 LNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
NQM PD Y Y LI+ C + E + + M+ + + V ++
Sbjct: 454 FNQMID-QGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNN-GMRLDIVFFGSIINNL 511
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + + + + PD N ++ + G+++ R ++ + GI+P
Sbjct: 512 CKLGRVMDAQNIFD-LTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 570
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+ L+ Y K D+ S+ M + ++ YN +I+ + G + F
Sbjct: 571 VVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFH 630
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M G+ + T+ ++ G F + I + + + ++ N +I+ +
Sbjct: 631 EMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTR 690
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ E + ++ + P + T+SIM KEG+
Sbjct: 691 RVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGL 726
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 7/199 (3%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+ L +F EML Q +P Y ++ L ++G+ A+ F+EM E GI Y+
Sbjct: 589 EGLSLFREML--QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSI 646
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
+L +N DEA +++ + N + D+ T +T+I R E + L+ +
Sbjct: 647 VLRGLFKNRCFDEAIFLFKELRAM-NVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 705
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ P VT +I++ K G+ ++ E + S M ++A C+PD +N ++ K ++
Sbjct: 706 GLVPCAVTYSIMITNLIKEGLVEEAEDMFSSM-QNAGCEPDSRLLNHVVRELLKKNEIVR 764
Query: 305 MERWYEKF--RNFGIDPET 321
+ K RNF ++ T
Sbjct: 765 AGAYLSKIDERNFSLEHLT 783
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 92/235 (39%), Gaps = 37/235 (15%)
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
G+ E A +VF+ MV GIEP Y L+ YC+ IDE +M +P
Sbjct: 550 GKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQ-KGIKPSTIL 608
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y+ +I +A R + + +M E + N T +IVL G K FD+ L L
Sbjct: 609 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDE-AIFLFKEL 667
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
+ K D+ T+NT+++ +V+ + + G+ P T++I+I
Sbjct: 668 RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMI--------- 718
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
T+ ++E DM F M G + D++
Sbjct: 719 -----------------TNLIKEGLVEEAEDM---------FSSMQNAGCEPDSR 747
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 140/341 (41%), Gaps = 37/341 (10%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ L K G+ E A ++ MV G +P + L+ YCR + A L++M
Sbjct: 370 TYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM 429
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ N P +Y +I L L + M + PN V +I++ Y G
Sbjct: 430 EK-RNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGR 488
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
++ R+L GM S PD++ N I+S + G+++ + + + G+ P+ TF
Sbjct: 489 IEEARRLLDGMSCSGV-APDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFG 547
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
I Y K KM+ +Y F++M
Sbjct: 548 AFILGYSKT---GKMTEAAKY--------------------------------FDEMLDH 572
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G+ + + LING+ AG + +S R L + +V +A I +K + E
Sbjct: 573 GLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEA 632
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+V+ +KEK PD T+S + + K+G +K + L E
Sbjct: 633 LKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDE 673
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 146/330 (44%), Gaps = 2/330 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ L K+G A++V EM E+G+ P +Y+ ++ C+ IDEA V L +
Sbjct: 230 TYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEA-VELKRS 288
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
P+ YTY+ + A R + +++M + + P+ + ++ G+ + G
Sbjct: 289 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 348
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D++ R+ M+ S ++ T N ++ G+++ + G P +RTF
Sbjct: 349 IDEVLRIKDVMV-SCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFC 407
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
+LI Y ++ + +++ M K ++ +Y +I D E+M
Sbjct: 408 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 467
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G+K + + LI YA+ G + + S +A ++ YNA+IS KA + E
Sbjct: 468 GLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 527
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++ + +PD+ TF Y+K G
Sbjct: 528 STYLLEIQGRGLKPDAVTFGAFILGYSKTG 557
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 157/355 (44%), Gaps = 27/355 (7%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P T+ ++ K+G+ A K F+EM++ G+ P LYT L+ + + + EA
Sbjct: 540 KPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALS 599
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
++ L PDV T S I + R + ++ ++ E+ + P+ T + ++ G+
Sbjct: 600 IFRRLHAL-GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGF 658
Query: 261 GKAGMFDQM-----ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
K G ++ E L G+ P+++ N ++ G + + ++
Sbjct: 659 CKQGEVEKAFELHDEMCLKGI------APNIFIYNALVDGLCKSGDIQRARKLFDGMPEK 712
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G++P++ T++ +I Y K + S+ M S YN ++ GD +
Sbjct: 713 GLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKA 772
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISSVRLASKLQIAENVSF 428
F +M +G A T +F LI+GY + LF ++I+ QI +
Sbjct: 773 MNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAK-------QIMPDHVT 824
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
Y VI KA + E ++K M+E++ D+ T++ + Y K G + +V+AL
Sbjct: 825 YTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFAL 879
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 150/358 (41%), Gaps = 26/358 (7%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H +AL +F L P T + L K+G+ + A KVF+E+ E+G+ P
Sbjct: 588 HFKAGNLMEALSIFRRLHALGVL-PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVP 646
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
Y++L++ +C+ +++AF ++M L P+++ Y+ L+ + + L
Sbjct: 647 DVFTYSSLISGFCKQGEVEKAFELHDEM-CLKGIAPNIFIYNALVDGLCKSGDIQRARKL 705
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
+ M E+ + P++VT + ++ GY K+ + + M S +P + N ++
Sbjct: 706 FDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM-PSKGVQPHSFVYNALVHGCC 764
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+G ++ + + G T +FN LI Y K + S + + M Q
Sbjct: 765 KEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHV 823
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
TY VI+ G + F++M + DT T+ L+ GY G
Sbjct: 824 TYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLG------------ 871
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS--ETFSIMTEAYAK 473
Q +E + + +++ +K D E Y + HC+ D+ E F + E K
Sbjct: 872 ---QSSEVFALFEKMVAKGVKPD-----EVTYGLVIYAHCKEDNLVEAFKLRDEVVGK 921
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 113/262 (43%), Gaps = 1/262 (0%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
DVYTY+ L+ A + + +MDE+ + PN ++V+ G + G D+ +
Sbjct: 227 DVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELK 286
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
M E P+ +T I + +++ + +E+ + G+ P+ + LI + +
Sbjct: 287 RSMGEKGLV-PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMR 345
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+ D++ + + M P TYN +I G + + M G K +++T
Sbjct: 346 EGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRT 405
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
FC LI GY + + + K + + Y A+I+ DL ++ ++M
Sbjct: 406 FCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMT 465
Query: 454 EKHCRPDSETFSIMTEAYAKEG 475
+P+ +SI+ AYA EG
Sbjct: 466 FSGLKPNVVVYSILIMAYASEG 487
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 145/340 (42%), Gaps = 17/340 (5%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P Y L++ G+ E AR++ + M G+ P Y A+++ + ++EA
Sbjct: 470 KPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 529
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +++ +PD T+ I + + +M + + PN +++ G+
Sbjct: 530 YLLEIQG-RGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 588
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
KAG + + L + PDV T + + G+V + + + + G+ P+
Sbjct: 589 FKAGNLMEALSIFR-RLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 647
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T++ LI + K+ +K + + M YN +++ GD + F+
Sbjct: 648 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 707
Query: 381 QMHAEGMKADTKTFCCLINGYANA-------GLFHKVISSVRLASKLQIAENVSFYNAVI 433
M +G++ D+ T+ +I+GY + LFH++ S + + YNA++
Sbjct: 708 GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSK-------GVQPHSFVYNALV 760
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
C K D+ + +++ M +K + +F+ + + Y K
Sbjct: 761 HGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCK 799
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 128/279 (45%), Gaps = 9/279 (3%)
Query: 129 QVFEMLKEQP--FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+ F + E P QP Y L+ K G E A +F EM+++G T + L+
Sbjct: 736 EAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNTLI 794
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
YC++ I EA +M PD TY+T+I A + E L+++M ER++
Sbjct: 795 DGYCKSCKIQEASQLFQEM-IAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNL 853
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
+TVT ++ GY K G ++ + M+ KPD T L ++A+ + +++E
Sbjct: 854 IVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGV-KPDEVTYG--LVIYAHCKEDNLVE 910
Query: 307 --RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ ++ G+ + ++LI A K+ + S +++ M +L + + N ++
Sbjct: 911 AFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVR 970
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+F + G FE + + G+ DT T L+NG N
Sbjct: 971 SFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLN 1009
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 143/334 (42%), Gaps = 3/334 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P Y ++ L K+G+ E A E+ G++P + A + Y + + EA
Sbjct: 506 PDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKY 565
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
++M P+ Y+ LI A ++++ + V P+ T + + G
Sbjct: 566 FDEMLD-HGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLL 624
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G + +V S + E PDV+T ++++S F +G+V+ +++ GI P
Sbjct: 625 KNGRVQEALKVFSELKEKGLV-PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 683
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+N L+ K + + + M + S TY+ +I+ + + F +
Sbjct: 684 FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 743
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M ++G++ + + L++G G K ++ R + A +SF N +I K+
Sbjct: 744 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSF-NTLIDGYCKSCK 802
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ E ++++ M K PD T++ + + + K G
Sbjct: 803 IQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAG 836
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 38/204 (18%), Positives = 77/204 (37%), Gaps = 36/204 (17%)
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSV---------------------------- 343
FRN+G F+ILI +Y + M D+ ++V
Sbjct: 150 FRNYG-GSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGM 208
Query: 344 MEYMRKL-------QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
ME K+ + + TY ++ A GD + + +M +G+ + +
Sbjct: 209 MELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSL 268
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
+I G G + + R + + N Y + + +A + E + ++ M++
Sbjct: 269 VIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTG 328
Query: 457 CRPDSETFSIMTEAYAKEGMNDKV 480
+PD S + + + +EG D+V
Sbjct: 329 LKPDYNACSALIDGFMREGDIDEV 352
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 172/387 (44%), Gaps = 7/387 (1%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
NTV ++ ++ +Q M KE P ++ ++ K G+ A +FN
Sbjct: 199 NTVIKSLCGDSRSQEALDMVQ--RMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFN 256
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
EMV++G+ P Y +++ A C+ +D+A L QM +PD TY+ +I +
Sbjct: 257 EMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVD-KGVEPDGVTYNAIIHGYSCS 315
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
++ +++ M + + P+TVT + + K G E + M PD+ +
Sbjct: 316 GHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGH-MPDIVS 374
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
+ +L +A +G+ M + + GI NILI A+ K+ M D+ V M+
Sbjct: 375 YSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQ 434
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
TY+ +I AF MG F QM + G++ +T + LI+G+ G
Sbjct: 435 GQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLV 494
Query: 409 KVISSV-RLASKLQIAENVSFYNAVI-SACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
K + + SK N+ F++++I S CI+ +M+ + V+ + RP TF+
Sbjct: 495 KAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEG-RVMDAQDVFNLVIHIGDRPTIVTFNS 553
Query: 467 MTEAYAKEGMNDKVYALEQEKLQMLLE 493
+ + Y G +K + + + + +E
Sbjct: 554 LIDGYCLVGKMEKAFGVLDAMVSVGIE 580
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 155/340 (45%), Gaps = 19/340 (5%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF-VTLNQ 204
TY L+ ++ +P+L ++ G++ T L C DEA V L++
Sbjct: 126 TYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHR 185
Query: 205 MKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERS-VTPNTVTQNIVLGGYGK 262
M L +C PD +Y+T+IK+ C D+ E ++ + + E +P+ V+ N V+ G+ K
Sbjct: 186 MSEL-SCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFK 244
Query: 263 AGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETR 322
G + + + M++ PDV T N+I+ +D E + + G++P+
Sbjct: 245 QGEVSKACNLFNEMVQKGVV-PDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGV 303
Query: 323 TFNILIGAYG-------KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
T+N +I Y +M+ KM+S K P T T+++ + + G +K
Sbjct: 304 TYNAIIHGYSCSGHWKESAKMFRKMTS------KGLIPDTV-TFSSFMSSLCKHGRSKDA 356
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
E F+ M +G D ++ L++GYA G F + + + I N N +ISA
Sbjct: 357 EEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISA 416
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
K + E V+ M+ + RP+ T+S + A+ + G
Sbjct: 417 HAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMG 456
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 133/321 (41%), Gaps = 3/321 (0%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
K G + A VF EM +G+ P Y+ L++A+CR + +A +QM ++ +P+
Sbjct: 419 KRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISI-GIEPNT 477
Query: 216 YTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
Y +LI C+ + E + + M + PN V + ++ G + V +
Sbjct: 478 AVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFN 537
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
++ +P + T N+++ + G+++ + + GI+P+ T N L+ Y K
Sbjct: 538 LVIHIGD-RPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKS 596
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
D + M + T+ TYN V++ G + F +M G D T+
Sbjct: 597 GKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTY 656
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
L+ G L + I+ + +++ N +I+A K E ++ +
Sbjct: 657 KILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAIST 716
Query: 455 KHCRPDSETFSIMTEAYAKEG 475
P+ T+ +M KEG
Sbjct: 717 SGLVPNVSTYGVMIRNLLKEG 737
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 154/364 (42%), Gaps = 8/364 (2%)
Query: 115 FSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG 174
S H + +A+ VF ++ Q +P TY L+ + G+ A + F++M+ G
Sbjct: 414 ISAHAKRGMMDEAMLVFTEMQGQGV-RPNVVTYSTLISAFCRMGRLADAMEKFSQMISIG 472
Query: 175 IEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDA--MRF 231
IEP +Y +L+ +C + + +A +++M + +P++ +S++I + C++ M
Sbjct: 473 IEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDA 532
Query: 232 ELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNT 291
+ + L + +R P VT N ++ GY G ++ VL M+ S +PDV T NT
Sbjct: 533 QDVFNLVIHIGDR---PTIVTFNSLIDGYCLVGKMEKAFGVLDAMV-SVGIEPDVVTNNT 588
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
++S + G++D + + + + P T T+NI++ + + M
Sbjct: 589 LVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSG 648
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
TY +++ F ++ A K D +IN +
Sbjct: 649 TAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEAN 708
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
S + NVS Y +I +K + E + ++ M++ C P S + +
Sbjct: 709 DLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRML 768
Query: 472 AKEG 475
++G
Sbjct: 769 LQKG 772
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 4/203 (1%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
EML ++ +P TY +L L ++G+ A+K+F+EM++ G + Y LL CR
Sbjct: 608 EMLHKK--VKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCR 665
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
N L DEA +++ + +C+ D+ +T+I A R E L+ + + PN
Sbjct: 666 NDLTDEAITLFHKLGAM-DCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVS 724
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
T +++ K G ++ + + S M E + C P +N I+ + KG + + K
Sbjct: 725 TYGVMIRNLLKEGSVEEADTMFSSM-EKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSK 783
Query: 312 FRNFGIDPETRTFNILIGAYGKK 334
I E T ++L+ + K
Sbjct: 784 VDGTIISLEASTTSLLMSLFSSK 806
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 129/310 (41%), Gaps = 36/310 (11%)
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
+ EM+ + ++P + ++ L G+ A+ VFN ++ G PT + +L+ Y
Sbjct: 500 ISEMM-SKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGY 558
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
C +++AF L+ M ++ +PDV T +TL+ + + + L+++M + V P
Sbjct: 559 CLVGKMEKAFGVLDAMVSV-GIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPT 617
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESAT---------------------------- 281
TVT NIVL G +AG +++ M++S T
Sbjct: 618 TVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFH 677
Query: 282 ------CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
CK D+ +NT+++ + + + G+ P T+ ++I K+
Sbjct: 678 KLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEG 737
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
++ ++ M K +S N++I GD Y ++ + + T
Sbjct: 738 SVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTS 797
Query: 396 CLINGYANAG 405
L++ +++ G
Sbjct: 798 LLMSLFSSKG 807
>gi|168025874|ref|XP_001765458.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683308|gb|EDQ69719.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 670
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 156/357 (43%), Gaps = 4/357 (1%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
W +A +M++ + F Y+++ ++ +P A +F M+E+G E E Y
Sbjct: 303 WDRAQSFIDMMQARGFSIGLH-EYIEMQWACARARKPREAYGLFQVMLEQGYELKLESYN 361
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
ALL AY R + ++A T ++ PDV ++S+LI AC +A + E + + M
Sbjct: 362 ALLCAYERTAQWEDAMRTFIWIQD-KGLTPDVMSWSSLISACANAGQAERALEVLERMKT 420
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
PN V+ +L Y K G +++ E + ML+S C P+ ++LS + Q
Sbjct: 421 SDCQPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSG-CPPNEVAWCSLLSAYEKGRQWK 479
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ EK G+ + ++ I A K ++ + M K TY+++I
Sbjct: 480 KVLYTIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIVTYSSLI 539
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR-LASKLQI 422
+A+ D+G + E F+ M G++ + + C L+ Y KVI + + +
Sbjct: 540 KAYGDVGLWEKAESVFKLMLRVGIRPNPQACCALLRAYGKGKELEKVIIFFESMEPQYGV 599
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ Y A+ AC + + RM+ C PDS ++ + Y G DK
Sbjct: 600 EPDKYAYAAIFWACWTCGEWQRAVKYIDRMEMAGCTPDSVIYTTLINMYEANGQIDK 656
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 151/357 (42%), Gaps = 7/357 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QAL++F +++ +P T+ L+V G+ + A ++F EM + GI P +T L
Sbjct: 235 QALKLFRWMEKAGIERPI-FTFNALMVACGRCASGDTAVELFEEMEKLGIVPDRITFTGL 293
Query: 186 LAAYCRNSLIDEA--FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
++A L D A F+ + Q + ++ Y + AC A + L+Q M E
Sbjct: 294 VSATTAAGLWDRAQSFIDMMQARGF---SIGLHEYIEMQWACARARKPREAYGLFQVMLE 350
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+ + N +L Y + ++ R ++ PDV + ++++S AN GQ +
Sbjct: 351 QGYELKLESYNALLCAYERTAQWEDAMRTFI-WIQDKGLTPDVMSWSSLISACANAGQAE 409
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
E+ + P ++ L+ AY K ++K + M P + +++
Sbjct: 410 RALEVLERMKTSDCQPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEVAWCSLL 469
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
A+ K + YT E++ GMK D + I+ A AG + + +K
Sbjct: 470 SAYEKGRQWKKVLYTIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGCL 529
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
N+ Y+++I A + E V+K M RP+ + + AY K +KV
Sbjct: 530 PNIVTYSSLIKAYGDVGLWEKAESVFKLMLRVGIRPNPQACCALLRAYGKGKELEKV 586
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/360 (20%), Positives = 148/360 (41%), Gaps = 35/360 (9%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
LG+ A KVF G+EP + T L+AA + +A M+ +P
Sbjct: 192 LGQMQNWYAATKVFRAFRSAGVEPNAYVCTTLIAALGCGRRLSQALKLFRWMEKAGIERP 251
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
++T++ L+ AC + L+++M++ + P+ +T ++ AG++D+ + +
Sbjct: 252 -IFTFNALMVACGRCASGDTAVELFEEMEKLGIVPDRITFTGLVSATTAAGLWDRAQSFI 310
Query: 274 SGMLESA-------------TC----KP-----------------DVWTMNTILSVFANK 299
M C KP + + N +L +
Sbjct: 311 DMMQARGFSIGLHEYIEMQWACARARKPREAYGLFQVMLEQGYELKLESYNALLCAYERT 370
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
Q + R + ++ G+ P+ +++ LI A ++ V+E M+ ++
Sbjct: 371 AQWEDAMRTFIWIQDKGLTPDVMSWSSLISACANAGQAERALEVLERMKTSDCQPNVVSW 430
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+++A+ G+ + E F M G + +C L++ Y + KV+ ++ +
Sbjct: 431 CGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEVAWCSLLSAYEKGRQWKKVLYTIEKLEE 490
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
L + +V ++ ISA KA E +K+M + C P+ T+S + +AY G+ +K
Sbjct: 491 LGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIVTYSSLIKAYGDVGLWEK 550
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 101/256 (39%), Gaps = 35/256 (13%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL+V E +K QP ++ LL K+G E A ++F+ M++ G P + +L
Sbjct: 410 RALEVLERMKTSDC-QPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEVAWCSL 468
Query: 186 LAAYCRNSLIDEAFVTLNQMKTL----------------------------------PNC 211
L+AY + + T+ +++ L C
Sbjct: 469 LSAYEKGRQWKKVLYTIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGC 528
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
P++ TYS+LIKA D +E E++++ M + PN +L YGK +++
Sbjct: 529 LPNIVTYSSLIKAYGDVGLWEKAESVFKLMLRVGIRPNPQACCALLRAYGKGKELEKVII 588
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
M +PD + I G+ ++ ++ G P++ + LI Y
Sbjct: 589 FFESMEPQYGVEPDKYAYAAIFWACWTCGEWQRAVKYIDRMEMAGCTPDSVIYTTLINMY 648
Query: 332 GKKRMYDKMSSVMEYM 347
DK V+E M
Sbjct: 649 EANGQIDKAMQVLERM 664
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 75/181 (41%), Gaps = 5/181 (2%)
Query: 96 KKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLG 155
++L K AW T+ S QW A + F+ + + P TY L+ G
Sbjct: 489 EELGMKLDVVAWSTTI----SALAKAGQWELAEEKFKQMTKSGCL-PNIVTYSSLIKAYG 543
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
G E A VF M+ GI P P+ ALL AY + +++ + M+ +PD
Sbjct: 544 DVGLWEKAESVFKLMLRVGIRPNPQACCALLRAYGKGKELEKVIIFFESMEPQYGVEPDK 603
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
Y Y+ + AC ++ M+ TP++V ++ Y G D+ +VL
Sbjct: 604 YAYAAIFWACWTCGEWQRAVKYIDRMEMAGCTPDSVIYTTLINMYEANGQIDKAMQVLER 663
Query: 276 M 276
M
Sbjct: 664 M 664
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 162/375 (43%), Gaps = 18/375 (4%)
Query: 129 QVFEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+ F++LKE + + P TY K++ L ++ + E + +F EM G+ P YT L+
Sbjct: 435 KAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILI 494
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
++C+ LI++A ++M+++ C P+V TY+ L+ A + + + ++ M + +
Sbjct: 495 DSFCKAGLIEQARSWFDEMRSV-GCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAAC 553
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVL------SGMLES---------ATCKPDVWTMNT 291
PN VT + ++ G KAG + V SG +ES T P+V T
Sbjct: 554 YPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGA 613
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
++ +V + G +P ++ LI + K D V M K
Sbjct: 614 LIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCG 673
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
+ + TY ++I+ G +M + + T+ +I+G + G K +
Sbjct: 674 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKAL 733
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
+ + L + + NV Y A+I K +++K+M K C P+ T+ ++
Sbjct: 734 NLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHC 793
Query: 472 AKEGMNDKVYALEQE 486
G+ D+ + L E
Sbjct: 794 CAAGLLDEAHLLLDE 808
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 156/394 (39%), Gaps = 49/394 (12%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
W +AL+ LK+ Y+P TY L+ +L +GQ E+ +V EM G
Sbjct: 185 WDEALEELGRLKDFG-YRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIG 243
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
A C+ +A L + + D + +I ++A F + M
Sbjct: 244 YFAQALCKVGRWADALNMLEK----EDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRC 299
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
S PN VT +L G+ K F +R+++ M+ + C P+ N+++ + N G
Sbjct: 300 NSCIPNVVTYRTLLSGFLKKKQFGWCKRIIN-MMMTEGCNPNPSLFNSLVHGYCNAGDYA 358
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKK-------------RMYDKM---SSVM--- 344
+ + + G P +NI IG+ + ++Y++M S V+
Sbjct: 359 YAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKV 418
Query: 345 -----------------------EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
E MRK P TS TY VI + F++
Sbjct: 419 NTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTS-TYTKVITFLCQAKKVEKSFLLFQE 477
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G+ D T+ LI+ + AGL + S + + NV Y A++ A +K+
Sbjct: 478 MKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQ 537
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
L++ ++ RM + C P++ T+S + + K G
Sbjct: 538 LIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAG 571
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 174/437 (39%), Gaps = 41/437 (9%)
Query: 78 ETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTV-AETFS-DHVLKKQWFQALQVFEMLK 135
E S G+ R+ I + L + + +N + E F+ D VL Q L +
Sbjct: 229 EMSASGFCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFN 288
Query: 136 EQPFYQ---------PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
E + P TY LL K Q +++ N M+ EG P P L+ +L+
Sbjct: 289 EAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLV 348
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV------DAMRFELIETLYQD 240
YC A+ N+M T + P Y+ I + +A +L+E +Y++
Sbjct: 349 HGYCNAGDYAYAYKLFNRMTTCGS-PPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEE 407
Query: 241 MDERSVTPNTV-TQNI--VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
M S N V T N L G GK F++ ++L M+ PD T +++
Sbjct: 408 MLAASCVLNKVNTANFSRCLCGVGK---FEKAFQILKEMMRKGF-VPDTSTYTKVITFLC 463
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+V+ +++ + G++P+ T+ ILI ++ K + ++ S + MR +
Sbjct: 464 QAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVV 523
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKV 410
TY ++ A+ F +M + T+ LI+G AG ++ K+
Sbjct: 524 TYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKL 583
Query: 411 I-SSVRLASKL--------QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
I +S + S IA NV Y A+I KA + + + M C P+
Sbjct: 584 IGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQ 643
Query: 462 ETFSIMTEAYAKEGMND 478
+ + + + K G D
Sbjct: 644 IVYDALIDGFCKIGKID 660
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 149/390 (38%), Gaps = 44/390 (11%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
++ F + Q Y Y L +LG A ++ E+ E+ E L L+
Sbjct: 117 CVRFFLWAERQVGYSHTGACYDALAEILGFEDPARTAERLLREIGEDDREVLRRLLNVLV 176
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
CR+ L DEA L ++K +P TY+ L++ A + E+ + ++M
Sbjct: 177 RRCCRHGLWDEALEELGRLKDFGY-RPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGF 235
Query: 247 TPNTVTQNIVLGGYGKAG----MFDQMER------------VLSGMLESA---------- 280
+ T K G + +E+ ++SG++E++
Sbjct: 236 CMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLH 295
Query: 281 -----TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
+C P+V T T+LS F K Q +R G +P FN L+ Y
Sbjct: 296 RMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAG 355
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS---DMGDAKHM---EYTFEQMHAEGM-- 387
Y + M P YN I + ++ +A+ + E +E+M A
Sbjct: 356 DYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVL 415
Query: 388 -KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
K +T F + G G F K ++ + + S Y VI+ +A + +
Sbjct: 416 NKVNTANFSRCLCG---VGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSF 472
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+++ MK PD T++I+ +++ K G+
Sbjct: 473 LLFQEMKRAGVNPDVYTYTILIDSFCKAGL 502
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 134/352 (38%), Gaps = 27/352 (7%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE--------- 172
KQ QA +F + + Y P TY L+ L K+G+ + A +V+ +++
Sbjct: 536 KQLIQAHDIFHRMVDAACY-PNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDF 594
Query: 173 --EG-----IEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC 225
EG I P Y AL+ C+ + +A L+ M C+P+ Y LI
Sbjct: 595 YFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLA-AGCEPNQIVYDALIDGF 653
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
+ + + ++ M + P+ T ++ K G D +VLS ML +C P+
Sbjct: 654 CKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLND-SCNPN 712
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
V T ++ + G+++ G P T+ LI GK D + +
Sbjct: 713 VVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFK 772
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
M TY +I G ++M + + C + G++
Sbjct: 773 QMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSK-- 830
Query: 406 LFHKVISSVRLASKLQIAENVSF---YNAVISACIKADDLMEMERVYKRMKE 454
K I+S+ L +++ E V Y +I + KA L ++K + E
Sbjct: 831 ---KFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVE 879
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 128/253 (50%), Gaps = 2/253 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L K G+ + A ++ +EM ++G++ +Y +++ C+ I++A
Sbjct: 466 PNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKL 525
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ +M+ + PD TY+T+I A + L Q+M +R + P VT N+++ G+
Sbjct: 526 MKEME-VAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFC 584
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
GM + +R+L MLE PD T NT++ + ++ + Y++ RN G+ P++
Sbjct: 585 MLGMLEDGDRLLGWMLEKGIV-PDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDS 643
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+NILI + K R + + + M + + T ++YN +I+ F FE+
Sbjct: 644 NTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEE 703
Query: 382 MHAEGMKADTKTF 394
M G+ AD + +
Sbjct: 704 MRGHGLVADGEIY 716
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 151/353 (42%), Gaps = 9/353 (2%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+WF EML ++ P TY L+ G+ G+ + +F+EM+ G++P Y
Sbjct: 384 KWFD-----EMLSKK--ISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTY 436
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
T L+ YC+ + AF N+M + P++ TY LI + L +M
Sbjct: 437 TTLIDVYCKAGEMVNAFSLHNEMVQM-GMTPNIVTYGALIDGLCKHGELDTANELLDEMR 495
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
++ + N N ++ G KAG +Q +++ M E A PD T T++ + G +
Sbjct: 496 KKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEM-EVAGIDPDAITYTTVIDAYCRLGDI 554
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
D + ++ + G+ P TFN+L+ + M + ++ +M + + TYN +
Sbjct: 555 DKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTL 614
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
++ +++M +G+ D+ T+ LI G+ A + + +
Sbjct: 615 MKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGY 674
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
V+ YNA+I K E +++ M+ D E ++ + +EG
Sbjct: 675 VPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEG 727
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 150/334 (44%), Gaps = 4/334 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY +++LL K G+ A KV EM+ + I P +YT L+ + + + A
Sbjct: 325 KPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANK 384
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
++M + PD TY+TLI+ + + L+ +M R + P+ VT ++ Y
Sbjct: 385 WFDEMLS-KKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVY 443
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
KAG + + M++ P++ T ++ G++D ++ R G+
Sbjct: 444 CKAGEMVNAFSLHNEMVQMGM-TPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLN 502
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+N ++ K ++ +M+ M + TY VI+A+ +GD +
Sbjct: 503 VCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQ 562
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA-CIKA 439
+M G++ TF L+NG+ G+ + + I + YN ++ CI+
Sbjct: 563 EMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIR- 621
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ + ++YKRM+ + PDS T++I+ + + K
Sbjct: 622 NSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCK 655
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 145/335 (43%), Gaps = 5/335 (1%)
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
E+A KVF E GI Y ++ + CR + EA L QM + PDV +YST
Sbjct: 243 EMAIKVF---CEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMD-FRSSTPDVVSYST 298
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
+I + L DM + + PN T N ++ K G + E+VL M+ S
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMM-SQ 357
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
PD T++ F G V +W+++ + I P+ T+ LI +G+ +
Sbjct: 358 KIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEP 417
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
++ M TY +I+ + G+ + +M GM + T+ LI+G
Sbjct: 418 QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDG 477
Query: 401 YANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
G + K + NV YN++++ KA ++ + ++ K M+ PD
Sbjct: 478 LCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPD 537
Query: 461 SETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
+ T++ + +AY + G DK + L QE L L+ +
Sbjct: 538 AITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPT 572
>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
Length = 792
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 158/380 (41%), Gaps = 36/380 (9%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
++ +A+ +++ +KE +P TY LL+ + G+ + A K+++EM ++G P
Sbjct: 409 QKLHEAVNLWDKMKEAGV-KPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVT 467
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
YT L+ Y + D A+ LN+M+ D YTY+ LI R ++ + +
Sbjct: 468 YTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGD-YTYNILINGLYMVNRVCEVDEMLKRF 526
Query: 242 DERSVTPNTVTQNIVLGGYGKAGM-------FDQMER------------VLSGMLESATC 282
P T+T N ++ G+ KAGM + QM + + G + C
Sbjct: 527 LSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCC 586
Query: 283 ---------------KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
+PD+ N + F +G + + G+ P+ +N
Sbjct: 587 DLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSF 646
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
+ Y +M + S M K + + Y +I+ FS +G+ + +M A +
Sbjct: 647 VTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHV 706
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
D KTF L +G +G + +L ++ N+ YN +I+AC++ L E +
Sbjct: 707 IPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQ 766
Query: 448 VYKRMKEKHCRPDSETFSIM 467
++ M PD T+ I+
Sbjct: 767 LHDEMLSSGVVPDDTTYDIL 786
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 148/356 (41%), Gaps = 8/356 (2%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K+W A+ + +++ + P TY L+ L K + A ++++M E G++P+
Sbjct: 375 KRWKDAIGLLKLVVDTGV--PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVT 432
Query: 182 YTALLAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
Y +LL YC +DEA ++M K P P+ TY+TL+K + F+ L
Sbjct: 433 YHSLLLGYCEKGRMDEALKLYSEMPDKGFP---PNEVTYTTLMKGYIKKKAFDNAYALLN 489
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
+M + V+ T NI++ G +++ +L L P T N+I++ F
Sbjct: 490 EMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFV-PTTMTYNSIINGFVKA 548
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G + Y + R GI P T+ I Y + D ++ Y+R+ + Y
Sbjct: 549 GMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAY 608
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
N I+ F G+ + + +G+ D + + GY N + + K
Sbjct: 609 NAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIK 668
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++ + Y +I K ++ +Y M H PD +TF+ +T + G
Sbjct: 669 QRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSG 724
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 155/355 (43%), Gaps = 7/355 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMV-EEGIEPTPELYTA 184
+ALQV ++E F +P E TY ++ +L K + + A ++ ++M+ G + L T
Sbjct: 238 RALQVLGKMREAGF-EPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATM 296
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC-VDAMRFELIETLYQDMDE 243
L+ YC N + +A +++ + P TY LIK C + M E + L + M E
Sbjct: 297 LMHGYCLNGEVGKALDLFDEVVS-DGVTPTNVTYGVLIKGCDAEGMTDETYK-LCRQMIE 354
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+ + P+T N+V+ G + + +L ++++ PDV+T ++ ++
Sbjct: 355 QGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV--PDVFTYGCLIHWLCKHQKLH 412
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
++K + G+ P T++ L+ Y +K D+ + M FP TY ++
Sbjct: 413 EAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLM 472
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
+ + + +M G+ T+ LING +V ++
Sbjct: 473 KGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFV 532
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
YN++I+ +KA + +Y++M++K P+ T++ + Y + D
Sbjct: 533 PTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCD 587
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/362 (19%), Positives = 143/362 (39%), Gaps = 5/362 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P + LLV A +F+EM +G ++Y ++ A R + +A
Sbjct: 148 PDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRL 207
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
++M +PD Y+ I + + M E P +T + V+
Sbjct: 208 FDEMAG-AGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLV 266
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K D+ R+ ML + K DV ++ + G+V +++ + G+ P
Sbjct: 267 KVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTN 326
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME-YTFE 380
T+ +LI + M D+ + M + ++ +N VI+ + D + +
Sbjct: 327 VTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGL--LRDKRWKDAIGLL 384
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
++ + D T+ CLI+ H+ ++ + + ++ Y++++ +
Sbjct: 385 KLVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKG 444
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGHWQQ 500
+ E ++Y M +K P+ T++ + + Y K+ D YAL E Q + + G +
Sbjct: 445 RMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGV-SCGDYTY 503
Query: 501 NI 502
NI
Sbjct: 504 NI 505
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 145/342 (42%), Gaps = 2/342 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P +Y ++ L +SG+ A KVF+EMV+ G+ P Y ++ + + ++ F
Sbjct: 193 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRL 252
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+QM +P+V TY+ L+ A R + L +M S+ P+ T +I+ G
Sbjct: 253 RDQMLQ-DGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLT 311
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G M + L+ +T + +L+ G+V E+ E + G+ P T
Sbjct: 312 RTGDSRTMLSLFGESLKKGVII-GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTT 370
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+N LI Y + R S+ E M+ TYN +I M E +
Sbjct: 371 AIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVME 430
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G+ +TF LI+ Y AG K + + I NV + +V+ A K
Sbjct: 431 MEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGK 490
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ E + M K P+++ ++ + +AY + G ++ + L
Sbjct: 491 IPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLL 532
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 144/324 (44%), Gaps = 2/324 (0%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL L K G+ A +V +V G+ PT +Y L+ YC+ + AF QMK+
Sbjct: 341 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKS-R 399
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+ +PD TY+ LI E L +M++ V P+ T N ++ YG+AG ++
Sbjct: 400 HIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKC 459
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
VLS M + K +V + +++ F G++ + + + P + +N +I
Sbjct: 460 FTVLSDMQDKGI-KSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIID 518
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
AY + ++ ++E M+ + TYN +++ E + +G++
Sbjct: 519 AYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRP 578
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
D ++ +I+ N G + + ++ K I + Y+ ++SA A + +ME +Y
Sbjct: 579 DVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLY 638
Query: 450 KRMKEKHCRPDSETFSIMTEAYAK 473
+ M K+ P S + E +K
Sbjct: 639 QHMVHKNVEPSSSIYGTRCENESK 662
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 163/395 (41%), Gaps = 36/395 (9%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
AL+VF+ + ++ P + TY ++ K G E ++ ++M+++G +P Y L
Sbjct: 213 DALKVFDEMVDRGV-APNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVL 271
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L+ CR +DE +++M + + PD +TYS L + +L+ + ++
Sbjct: 272 LSGLCRAGRMDETRALMDEMTSY-SMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKG 330
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVL-----SGM------------------------ 276
V T +I+L G K G + E+VL +G+
Sbjct: 331 VIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAF 390
Query: 277 -----LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
++S +PD T N +++ + E + G+DP TFN LI AY
Sbjct: 391 SIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAY 450
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
G+ +K +V+ M+ ++ +V++AF G + M + + +
Sbjct: 451 GRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNA 510
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
+ + +I+ Y +G + V ++ ++ YN ++ K + E E +
Sbjct: 511 QVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYN 570
Query: 452 MKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ + RPD +++ + A +G D+ L QE
Sbjct: 571 LTNQGLRPDVVSYNTIISACCNKGDTDRALELLQE 605
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 115/260 (44%), Gaps = 17/260 (6%)
Query: 117 DHVLKKQWFQALQVFEMLKE---------QPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
DH+ L EM+ E + P T+ L+ G++GQ E V
Sbjct: 404 DHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVL 463
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM---KTLPNCQPDVYTYSTLIKA 224
++M ++GI+ + +++ A+C+N I EA L+ M +PN Q Y+++I A
Sbjct: 464 SDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQ----VYNSIIDA 519
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
+++ E L + M V+ + T N++L G K D+ E ++ L + +P
Sbjct: 520 YIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYN-LTNQGLRP 578
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
DV + NTI+S NKG D ++ + I P RT++ L+ A G M +
Sbjct: 579 DVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLY 638
Query: 345 EYMRKLQFPWTSSTYNNVIE 364
++M +SS Y E
Sbjct: 639 QHMVHKNVEPSSSIYGTRCE 658
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 144/354 (40%), Gaps = 2/354 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L L ++G +F E +++G+ + LL C++ + +A
Sbjct: 298 PDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQV 357
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L +M P Y+TLI + ++++ M R + P+ +T N ++ G
Sbjct: 358 L-EMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLC 416
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K M + E ++ M E + P V T NT++ + GQ++ ++ GI
Sbjct: 417 KMEMITEAEDLVMEM-EKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNV 475
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+F ++ A+ K + ++++ M + YN++I+A+ + G + E+
Sbjct: 476 ISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEK 535
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M + G+ A T+ L+ G + + + + +V YN +ISAC D
Sbjct: 536 MKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGD 595
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
+ + M + RP T+ + A G + L Q + +E S
Sbjct: 596 TDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPS 649
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 123/287 (42%), Gaps = 8/287 (2%)
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDM--DERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+PD + ++ ++ACV A + + + M E + P+ + N+V+ G ++G
Sbjct: 155 RPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDA 214
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+V M++ P+ T NT++ G ++ R ++ G P T+N+L+
Sbjct: 215 LKVFDEMVDRGV-APNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLS 273
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+ D+ ++M+ M TY+ + + + GD++ M F + +G+
Sbjct: 274 GLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVII 333
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
T L+NG G K + + + + YN +I+ + DL ++
Sbjct: 334 GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIF 393
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
++MK +H RPD T++ + K M E E L M +E SG
Sbjct: 394 EQMKSRHIRPDHITYNALINGLCKMEM-----ITEAEDLVMEMEKSG 435
>gi|302794911|ref|XP_002979219.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
gi|300152987|gb|EFJ19627.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
Length = 1143
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 171/419 (40%), Gaps = 78/419 (18%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+QV E L + + + LL K+G E A K F +VE GI Y +
Sbjct: 539 EAVQVMEELLAKGL-NLDDTAWKTLLHCYVKAGNVERATKTFKTLVESGIADLMA-YNDM 596
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L+ Y ++++A + Q+K+ + QPD + T++K +A E + + M E+
Sbjct: 597 LSLYAEFDMLEDAKLLFQQLKS-SSIQPDQVWFGTMVKLYCNANMVAAAEEVLRQMREKG 655
Query: 246 VTPNTVTQNIVLGGYGKAG---------------------------------MFDQMERV 272
TP+ +TQ I++ YG+A +FD+ +
Sbjct: 656 FTPDHITQGILINAYGEANRIEEAAGLLEASAKEDESEAAAISRIYLCLKFRLFDKATLL 715
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
L +LES T + TI F GQV E + + ++ G D E T LI AYG
Sbjct: 716 LHRVLESFTLDSAAYNQLTI--NFLKAGQVPPAEMLHSRMQDKGFDVEDSTLGHLIAAYG 773
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K Y+ ++ + K + P + Y++++ A + + E+M G+K D+
Sbjct: 774 KAGRYEVLTKL-----KPELPRNNFVYSSMVGALINCNQLEKAAGLVEKMRQIGLKCDSV 828
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL---------- 442
L+N Y+ AGL + + +A I ++ YN +I A ++A L
Sbjct: 829 LVSILLNAYSKAGLVEDADALIHMARGDGIPLDIVAYNTIIKADLRAGRLKKAIDTYSSL 888
Query: 443 -------------------------MEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ E+++K +K +PD + +S M YAK GM
Sbjct: 889 TNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGM 947
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 151/350 (43%), Gaps = 40/350 (11%)
Query: 145 GTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQ 204
Y +L + K+GQ A + + M ++G + L+AAY + + L +
Sbjct: 728 AAYNQLTINFLKAGQVPPAEMLHSRMQDKGFDVEDSTLGHLIAAYGKAG----RYEVLTK 783
Query: 205 MKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG 264
+K P + + YS+++ A ++ + E L + M + + ++V +I+L Y KAG
Sbjct: 784 LK--PELPRNNFVYSSMVGALINCNQLEKAAGLVEKMRQIGLKCDSVLVSILLNAYSKAG 841
Query: 265 MFDQMERVL------------------------SGMLESAT----------CKPDVWTMN 290
+ + + ++ +G L+ A +P + T +
Sbjct: 842 LVEDADALIHMARGDGIPLDIVAYNTIIKADLRAGRLKKAIDTYSSLTNLGLRPSLQTYD 901
Query: 291 TILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
T++SVFA G+ E+ ++ ++ G P+ + ++ ++ Y K MY+ + + E M+
Sbjct: 902 TMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLR 961
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
+YNN+I+A++ G E +M G + TF LI+ YA+ G ++
Sbjct: 962 GLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAGCPPSSVTFLLLISAYAHRGKCNEA 1021
Query: 411 ISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
+++ I V YN V+ A +A + Y +M+ +PD
Sbjct: 1022 ENALERMQTAAIRPTVRHYNEVMLAFSRARLPSQAMESYLKMERSGIQPD 1071
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 172/423 (40%), Gaps = 47/423 (11%)
Query: 107 WVNTVAETFSD--HVLKKQ--WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPEL 162
WV + TF + VLK Q W +A + F +K Q Y P Y LL + G+ Q L
Sbjct: 237 WVGRL--TFRELCTVLKWQQGWKEAQEFFAWMKLQLSYIPSVIVYSMLLKVYGRDKQIGL 294
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A F EM+++ ++P ++ ++ Y + DE M + P TY+T++
Sbjct: 295 AEAAFQEMLDQKLDPDEVAFSTMILNYANAEMFDEMLTMYEAMMS-RGIVPSSVTYTTML 353
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
A R L++D+ E SV + + +++ Y K G F++ V ML A
Sbjct: 354 IHLNKAERLADAALLWEDLVEESVELSPLAYALMITIYRKLGRFEEALEVFEAML-GAGY 412
Query: 283 KPDVWTMNTILSVFANKGQVD-------MMERW---------------YEKFRNFGIDP- 319
PD N +L + G+ D M+R EK F +
Sbjct: 413 YPDSLIYNMVLHMLGKLGRYDEAVDVFTAMQRQELCTSKYSYATMLHICEKADKFELAAS 472
Query: 320 ------------ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS 367
+ + +I YGK +YD+ + + M +L+ T++ +
Sbjct: 473 IFSDMQMKRCPVDEVVYTSVISIYGKAGLYDEAEKLFQEMNELRLLVDVKTFSVMANVRL 532
Query: 368 DMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVS 427
G E++ A+G+ D + L++ Y AG + + + + IA+ ++
Sbjct: 533 KAGKYNEAVQVMEELLAKGLNLDDTAWKTLLHCYVKAGNVERATKTFKTLVESGIADLMA 592
Query: 428 FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEK 487
YN ++S + D L + + +++++K +PD F M + Y M V A E+
Sbjct: 593 -YNDMLSLYAEFDMLEDAKLLFQQLKSSSIQPDQVWFGTMVKLYCNANM---VAAAEEVL 648
Query: 488 LQM 490
QM
Sbjct: 649 RQM 651
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 182/437 (41%), Gaps = 82/437 (18%)
Query: 118 HVLKK--QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
H+L K ++ +A+ VF ++ Q K +Y +L + K+ + ELA +F++M +
Sbjct: 424 HMLGKLGRYDEAVDVFTAMQRQELCTSKY-SYATMLHICEKADKFELAASIFSDMQMKRC 482
Query: 176 EPTPELYTALLAAYCRNSLIDEA---FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE 232
+YT++++ Y + L DEA F +N+++ L DV T+S + + A ++
Sbjct: 483 PVDEVVYTSVISIYGKAGLYDEAEKLFQEMNELRLLV----DVKTFSVMANVRLKAGKYN 538
Query: 233 LIETLYQDMDERSVTPNTVTQNIVLGGYGKAG---------------------------- 264
+ +++ + + + +L Y KAG
Sbjct: 539 EAVQVMEELLAKGLNLDDTAWKTLLHCYVKAGNVERATKTFKTLVESGIADLMAYNDMLS 598
Query: 265 ---MFDQME--RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
FD +E ++L L+S++ +PD T++ ++ N V E + R G P
Sbjct: 599 LYAEFDMLEDAKLLFQQLKSSSIQPDQVWFGTMVKLYCNANMVAAAEEVLRQMREKGFTP 658
Query: 320 ETRTFNILIGAYG---------------------------------KKRMYDKMSSVMEY 346
+ T ILI AYG K R++DK + ++
Sbjct: 659 DHITQGILINAYGEANRIEEAAGLLEASAKEDESEAAAISRIYLCLKFRLFDKATLLLHR 718
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
+ + F S+ YN + F G E +M +G + T LI Y AG
Sbjct: 719 VLE-SFTLDSAAYNQLTINFLKAGQVPPAEMLHSRMQDKGFDVEDSTLGHLIAAYGKAGR 777
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ +V++ + K ++ N Y++++ A I + L + + ++M++ + DS SI
Sbjct: 778 Y-EVLTKL----KPELPRNNFVYSSMVGALINCNQLEKAAGLVEKMRQIGLKCDSVLVSI 832
Query: 467 MTEAYAKEGMNDKVYAL 483
+ AY+K G+ + AL
Sbjct: 833 LLNAYSKAGLVEDADAL 849
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 110/263 (41%), Gaps = 2/263 (0%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL K+G E A + + +GI Y ++ A R + +A T + + L
Sbjct: 833 LLNAYSKAGLVEDADALIHMARGDGIPLDIVAYNTIIKADLRAGRLKKAIDTYSSLTNL- 891
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+P + TY T+I + R E +++D+ P+ + ++ Y K+GM++
Sbjct: 892 GLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHA 951
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+ M + +P + N ++ +A GQ E+ + G P + TF +LI
Sbjct: 952 ADLFEAM-KLRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAGCPPSSVTFLLLIS 1010
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
AY + ++ + +E M+ T YN V+ AFS ++ +M G++
Sbjct: 1011 AYAHRGKCNEAENALERMQTAAIRPTVRHYNEVMLAFSRARLPSQAMESYLKMERSGIQP 1070
Query: 390 DTKTFCCLINGYANAGLFHKVIS 412
D + +I +F + +S
Sbjct: 1071 DVVSSRTMIRILLEGSMFEEGLS 1093
>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
Length = 792
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 159/380 (41%), Gaps = 36/380 (9%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
++ +A+ +++ +KE +P TY LL+ + G+ + A K+++EM ++G P
Sbjct: 409 QKLHEAVNLWDKMKEAGV-KPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVT 467
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMK------------TLPN--------CQ--------- 212
YT L+ Y + D A+ LN+M+ L N C+
Sbjct: 468 YTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFL 527
Query: 213 -----PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFD 267
P TY+++I V A +Y+ M ++ +TPN VT + GY + D
Sbjct: 528 SEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCD 587
Query: 268 QMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
++L + +PD+ N + F +G + + G+ P+ +N
Sbjct: 588 LAVKLLIYVRRDGI-QPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSF 646
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
+ Y +M + S M K + + Y +I+ FS +G+ + +M A +
Sbjct: 647 VTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHV 706
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
D KTF L +G +G + +L ++ N+ YN +I+AC++ L E +
Sbjct: 707 IPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQ 766
Query: 448 VYKRMKEKHCRPDSETFSIM 467
++ M PD T+ I+
Sbjct: 767 LHDEMLSSGVVPDDTTYDIL 786
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 148/356 (41%), Gaps = 8/356 (2%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K+W A+ + E++ + P TY L+ L K + A ++++M E G++P+
Sbjct: 375 KRWKDAIGLLELVVDTGV--PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVT 432
Query: 182 YTALLAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
Y +LL YC +DEA ++M K P P+ TY+TL+K + F+ L
Sbjct: 433 YHSLLLGYCEKGRMDEALKLYSEMPDKGFP---PNEVTYTTLMKGYIKKKAFDNAYALLN 489
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
+M + V+ T NI++ G +++ +L L P T N+I++ F
Sbjct: 490 EMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFV-PTTMTYNSIINGFVKA 548
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G + Y + R GI P T+ I Y + D ++ Y+R+ + Y
Sbjct: 549 GMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAY 608
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
N I+ F G+ + + +G+ D + + GY N + + K
Sbjct: 609 NAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIK 668
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++ + Y +I K ++ +Y M H PD +TF+ +T + G
Sbjct: 669 QRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSG 724
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 156/357 (43%), Gaps = 11/357 (3%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMV-EEGIEPTPELYTA 184
+ALQV ++E F +P E TY ++ +L K G+ + A ++ ++M+ G + L T
Sbjct: 238 RALQVLGKMREAGF-EPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATM 296
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC-VDAMRFELIETLYQDMDE 243
L+ YC + + +A +++ + P TY LIK C + M E + L + M E
Sbjct: 297 LMHGYCLHGEVGKALDLFDEVVS-DGVTPTNVTYGVLIKGCDAEGMSDETYK-LCRQMIE 354
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA--TCKPDVWTMNTILSVFANKGQ 301
+ + +T N+V+ G + D+ + G+LE T PDV+T ++ +
Sbjct: 355 QGLLLSTYEFNLVIKGL----LRDKRWKDAIGLLELVVDTGVPDVFTYGCLIHWLCKHQK 410
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ ++K + G+ P T++ L+ Y +K D+ + M FP TY
Sbjct: 411 LHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTT 470
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+++ + + +M G+ T+ LING +V ++
Sbjct: 471 LMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEG 530
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
YN++I+ +KA + +Y++M++K P+ T++ + Y + D
Sbjct: 531 FVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCD 587
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/361 (19%), Positives = 143/361 (39%), Gaps = 3/361 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P + LLV + A +F+EM +G ++Y ++ A R + +A
Sbjct: 148 PDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRL 207
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
++M +PD Y+ I + + M E P +T + V+
Sbjct: 208 FDEMAG-AGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLV 266
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G D+ R+ ML + K DV ++ + G+V +++ + G+ P
Sbjct: 267 KVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTN 326
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+ +LI + M D+ + M + ++ +N VI+ K E
Sbjct: 327 VTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLEL 386
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
+ G+ D T+ CLI+ H+ ++ + + ++ Y++++ +
Sbjct: 387 VVDTGVP-DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGR 445
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGHWQQN 501
+ E ++Y M +K P+ T++ + + Y K+ D YAL E Q + + G + N
Sbjct: 446 MDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGV-SCGDYTYN 504
Query: 502 I 502
I
Sbjct: 505 I 505
>gi|388499386|gb|AFK37759.1| unknown [Lotus japonicus]
Length = 500
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/443 (21%), Positives = 192/443 (43%), Gaps = 16/443 (3%)
Query: 52 HTSFSSESAVAAKKRLWK------EGEYPGVSETS--IPGYRSKRTPIKNLKKKLER-KA 102
H S + + + R WK +G +P +S T+ I Y K +++ L+ +A
Sbjct: 62 HKKLSRKKCGSLRGRGWKFGSGFVDGIFPVLSPTAKKIMDYLQKGVDTESIWGSLDMLQA 121
Query: 103 KAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPEL 162
+ W + + + ++KQW + + + + ++ Y L+ G+ +
Sbjct: 122 SLEIWDDILTVSVQLR-MRKQWDSIISICRWILLRSSFKQDVICYNLLIDAFGQKFLYKE 180
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKT--LPNCQPDVYTYST 220
A + +++E P + Y L+ AYC + L+++A +MK LP+ Y++
Sbjct: 181 AESTYLQLLEARCIPNEDTYALLIKAYCLSGLLEKAEAVFVEMKNYGLPS---SAVVYNS 237
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
I + E ++ M P+T T +++ YGK G +V + ML S
Sbjct: 238 YINGLMKGGNPNKAEEIFLRMKRDGCKPSTETYTMLINLYGKDGKSFMALKVFNEML-SH 296
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
CKP++ T +++ FA +G + E +E+ + G++P+ ++N L+ AY +
Sbjct: 297 KCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYSYNALMEAYSRAGFPYGA 356
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+ + M+ + ++YN +++A+ G E FE M G+ K+ L++
Sbjct: 357 AEIFSLMQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSA 416
Query: 401 YANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
++ G K + K + + N++++ + +ME V M+ C D
Sbjct: 417 FSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEAD 476
Query: 461 SETFSIMTEAYAKEGMNDKVYAL 483
T++I+ Y + G DK+ L
Sbjct: 477 ISTYNILINRYGQAGFIDKMEGL 499
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 105/244 (43%), Gaps = 2/244 (0%)
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
S + + N+++ +G+ ++ + E +LE A C P+ T ++ + G ++
Sbjct: 157 SFKQDVICYNLLIDAFGQKFLYKEAESTYLQLLE-ARCIPNEDTYALLIKAYCLSGLLEK 215
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
E + + +N+G+ +N I K +K + M++ ++ TY +I
Sbjct: 216 AEAVFVEMKNYGLPSSAVVYNSYINGLMKGGNPNKAEEIFLRMKRDGCKPSTETYTMLIN 275
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
+ G + F +M + K + T+ L+N +A GL K + +
Sbjct: 276 LYGKDGKSFMALKVFNEMLSHKCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEP 335
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYAL 483
+V YNA++ A +A ++ M+ C PD +++I+ +AY + G +ND
Sbjct: 336 DVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNILVDAYGRAGFLNDAEAVF 395
Query: 484 EQEK 487
E K
Sbjct: 396 EDMK 399
>gi|357122970|ref|XP_003563186.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 675
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 156/348 (44%), Gaps = 2/348 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P+ Y LL K G + A +V +EM + G+ P Y+ L+ AY R + A +
Sbjct: 303 KPRTRAYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESARI 362
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +M+ +P Y +S ++ D ++ + ++M V P+ N+++ +
Sbjct: 363 LLKEMEA-DGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTF 421
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
GK + M E +PDV T NT++ G+ D +E+ R P
Sbjct: 422 GKYNCLGHAMDAFNRMREEG-IEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPG 480
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T T+NI+I G++ + + +++ M++ TY +++ + G K E
Sbjct: 481 TTTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIE 540
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
M A+G+K + L+N YA GL ++ V+ + + N++++A +
Sbjct: 541 VMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDR 600
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
++E V + MKE RPD T++ + +A + DKV + +E +
Sbjct: 601 RVVEAFSVLQFMKENDLRPDVITYTTLMKALIRIEQFDKVPVIYEEMI 648
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 147/329 (44%), Gaps = 2/329 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E TY L+ ++G+ E AR + EM +G++P+ +++ +LA + +AF
Sbjct: 339 PDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAV 398
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L +M QPD + Y+ +I + M E + P+ VT N ++ +
Sbjct: 399 LREMHA-SGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHR 457
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G D+ + M ES C P T N ++++ + + +E + + G+ P
Sbjct: 458 KGGRHDRAMELFEEMRES-NCPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNI 516
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+ L+ YG+ + + +E M+ + + Y+ ++ A++ G A H +
Sbjct: 517 ITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKA 576
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M A+G++A T L+N + + S ++ + + +V Y ++ A I+ +
Sbjct: 577 MRADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRPDVITYTTLMKALIRIEQ 636
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEA 470
++ +Y+ M C PD + +++ A
Sbjct: 637 FDKVPVIYEEMITSGCAPDRKARAMLRSA 665
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 127/278 (45%), Gaps = 5/278 (1%)
Query: 213 PDVYTYSTLIKACV---DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
PD+ +YS L+ + + D ++E L D+ E + P+ + ++ + +A + D
Sbjct: 195 PDLASYSHLLASLLNTRDPPDAAILERLLGDLRESRLEPDAPLFSDLISAFARAALPDAA 254
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG-IDPETRTFNILI 328
+L+ ++ P + ++S G+V E + +F G I P TR +N L+
Sbjct: 255 LDLLASA-QAIGLTPRSNAVTALISALGGAGRVAEAEALFLEFFLAGEIKPRTRAYNALL 313
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
Y K V++ M +TY+ +++A++ G + ++M A+G+K
Sbjct: 314 KGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVK 373
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
+ F ++ G+ + G + K + +R + + FYN +I K + L
Sbjct: 374 PSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDA 433
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ RM+E+ PD T++ + +A+ K G +D+ L +E
Sbjct: 434 FNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEE 471
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/346 (19%), Positives = 141/346 (40%), Gaps = 46/346 (13%)
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLV-LLGKSGQPELA--RKVFNEMVEEGIEPTPELYTA 184
L++ +++E F P +Y LL LL P+ A ++ ++ E +EP L++
Sbjct: 182 LRLLALIREHGFL-PDLASYSHLLASLLNTRDPPDAAILERLLGDLRESRLEPDAPLFSD 240
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L++A+ R +L D A L + +
Sbjct: 241 LISAFARAALPDAALDLLASAQAI------------------------------------ 264
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+TP + ++ G AG + E + + KP N +L + G +
Sbjct: 265 GLTPRSNAVTALISALGGAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKN 324
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
E+ ++ + G+ P+ T+++L+ AY + ++ +++ M +S ++ ++
Sbjct: 325 AEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILA 384
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
F D GD + +MHA G++ D + +I+ + + + + I
Sbjct: 385 GFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEP 444
Query: 425 NVSFYNAVISACIKA---DDLMEMERVYKRMKEKHCRPDSETFSIM 467
+V +N +I A K D ME+ ++ M+E +C P + T++IM
Sbjct: 445 DVVTWNTLIDAHRKGGRHDRAMEL---FEEMRESNCPPGTTTYNIM 487
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 165/387 (42%), Gaps = 24/387 (6%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+Q F +K + PK + LL K G+ + ++ F +M+ G +PT Y +
Sbjct: 43 EAIQCFSKMKRFRVF-PKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIM 101
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ ++ A +MK PD TY+++I R + +++M +
Sbjct: 102 IDCMCKEGDVEAARGLFEEMK-FRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 160
Query: 246 VTPNTVTQNIVLGGYGKAG-------MFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
P+ +T N ++ + K G F +M+R +G+ KP+V + +T++ F
Sbjct: 161 CEPDVITYNALINCFCKFGKLPKGLEFFREMKR--NGL------KPNVVSYSTLVDAFCK 212
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
+G + ++Y R G+ P T+ LI AY K + M ++ W T
Sbjct: 213 EGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVT 272
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV-RLA 417
Y +I+ + + ++M +K TFC LI+G L K I R++
Sbjct: 273 YTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRIS 332
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
+ + N + Y A+I K + + ++++M +K PD ++ + + K+G
Sbjct: 333 NDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNV 392
Query: 478 DKVYALEQE------KLQMLLEASGHW 498
+ AL + KL +L S W
Sbjct: 393 LEALALRDKMVETGMKLDLLAYTSLVW 419
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 104/243 (42%), Gaps = 3/243 (1%)
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
C P + L +D E + M V P T + N +L + K G D ++
Sbjct: 21 CVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVK 80
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
R M+ A KP V+T N ++ +G V+ +E+ + G+ P+T T+N +I
Sbjct: 81 RFFKDMI-GAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDG 139
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD-AKHMEYTFEQMHAEGMKA 389
+GK D E M+ + TYN +I F G K +E+ F +M G+K
Sbjct: 140 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEF-FREMKRNGLKP 198
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
+ ++ L++ + G+ + I ++ + N Y ++I A K +L + R+
Sbjct: 199 NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLA 258
Query: 450 KRM 452
M
Sbjct: 259 NEM 261
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 252 TQNIVLGGYGKAGMFDQMERVLS--GMLESAT----------CKPDVWTMNTILSVFANK 299
T+N+ + G+G +FD + VL GM+E A P + N +L FA
Sbjct: 17 TRNVCVPGFG---VFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKL 73
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G+ D ++R+++ G P T+NI+I K+ + + E M+ + TY
Sbjct: 74 GKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTY 133
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
N++I+ F +G FE+M + D T+ LIN + G K + R +
Sbjct: 134 NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKR 193
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ NV Y+ ++ A K + + + Y M+ P+ T++ + +AY K G
Sbjct: 194 NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSD 253
Query: 480 VYALEQEKLQMLLE 493
+ L E LQ+ +E
Sbjct: 254 AFRLANEMLQVGVE 267
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 157/384 (40%), Gaps = 46/384 (11%)
Query: 111 VAETFSDHVLKK--------QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPEL 162
V+ + HV++K +FQAL F +P + Y +++ L GK +L
Sbjct: 101 VSPSLVSHVIEKCAAVRHGIPFFQALSFFNWATSRPGFTHHPEPYNEMIDLAGKVRNFDL 160
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
+V + M +E + E ++ L+ Y R L EA N+M+ NC+PD +S LI
Sbjct: 161 GWQVIDLMKARNVEISIETFSILIRRYVRAGLASEAVHAFNRMEDY-NCKPDKIAFSILI 219
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
R ++ + + ++ P+ + ++ G+ +AG + ERV + M + A C
Sbjct: 220 SILCRKRRATEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIPEAERVFTEM-KVAGC 277
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
P+V+T ++ GQ+ + + + G +P
Sbjct: 278 MPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEP----------------------- 314
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
S T+NN++ G + + + QM G DT T+ LI +
Sbjct: 315 ------------NSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHC 362
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
G + + + K + N S +N + + K D+ R+Y +MKE C+ ++
Sbjct: 363 KDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTV 422
Query: 463 TFSIMTEAYAKEGMNDKVYALEQE 486
T++I+ + D V L++E
Sbjct: 423 TYNILMRMFVDTKSTDMVLKLKKE 446
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 2/189 (1%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
HV + + LQV+ +K P TY L+ K G + A KV N MV++G P
Sbjct: 326 HVKAGRTEKVLQVYNQMKRMG-CPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSP 384
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
+ L + + ++ A +MK L C+ + TY+ L++ VD +++ L
Sbjct: 385 NASTFNGLFGSIAKLRDVNGAHRLYAKMKEL-KCKANTVTYNILMRMFVDTKSTDMVLKL 443
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
++MDE V PN T +++ Y G ++ + M+E KP + +L
Sbjct: 444 KKEMDEDDVEPNVNTYCVLIAMYCGMGHWNNAYKFFREMVEEKCLKPSLPVYEKVLQQLR 503
Query: 298 NKGQVDMME 306
GQ+ E
Sbjct: 504 KAGQLKKHE 512
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/230 (18%), Positives = 84/230 (36%), Gaps = 37/230 (16%)
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
GK FD +V+ ++++ + + T + ++ + G + + ++ P+
Sbjct: 153 GKVRNFDLGWQVID-LMKARNVEISIETFSILIRRYVRAGLASEAVHAFNRMEDYNCKPD 211
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
F+ILI +KR + S + ++ +F Y N++ + G+ E F
Sbjct: 212 KIAFSILISILCRKRRATEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIPEAERVFT 270
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M G C+ N Y Y VI A +
Sbjct: 271 EMKVAG---------CMPNVYT--------------------------YTIVIDALCRCG 295
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
+ V+ M + C P+S TF+ + + K G +KV + + +M
Sbjct: 296 QITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRM 345
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 152/337 (45%), Gaps = 16/337 (4%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ + K G+ E A +F++MVE G+ P Y L+ YC ++ AF
Sbjct: 294 EPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFS 353
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
++M P V TY+ L+ A R + + ++M ++ + P+ +T NI++ GY
Sbjct: 354 YRDEM-VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGY 412
Query: 261 GKAG----MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG 316
+ G FD +LS +E P T +++ V + + ++ + +EK + G
Sbjct: 413 SRCGNAKKAFDLHNEMLSKGIE-----PTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 467
Query: 317 IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME 376
+ P+ FN ++ + ++ +++ M + P T+N +++ G +
Sbjct: 468 VSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEAR 527
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK-LQIAENVSF--YNAVI 433
++M G+K D ++ LI+GY G + + R+ + L I N + YNA+I
Sbjct: 528 MLLDEMKRRGIKPDHISYNTLISGYGRRG---DIKDAFRVRDEMLSIGFNPTLLTYNALI 584
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
K + E + K M K PD T+ + E
Sbjct: 585 KCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 621
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 151/369 (40%), Gaps = 11/369 (2%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
W ++F + Y T+ ++ +L K G+ + AR+ M G +P Y
Sbjct: 212 WVLYAEMFRLRISSTVY-----TFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYN 266
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
++ Y I+ A L+ M+ + +PD YTY +LI R E L+ M E
Sbjct: 267 TIIHGYSSRGNIEGARRILDAMR-VKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVE 325
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT--CKPDVWTMNTILSVFANKGQ 301
+ PN VT N ++ GY G +ER S E P V T N ++ +G+
Sbjct: 326 IGLVPNAVTYNTLIDGYCNKG---DLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGR 382
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ + ++ R GI P+ T+NILI Y + K + M T TY +
Sbjct: 383 MGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTS 442
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+I S K + FE++ +G+ D F +++G+ G + ++ +
Sbjct: 443 LIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKS 502
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
+ + +N ++ + + E + MK + +PD +++ + Y + G +
Sbjct: 503 VPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAF 562
Query: 482 ALEQEKLQM 490
+ E L +
Sbjct: 563 RVRDEMLSI 571
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 165/375 (44%), Gaps = 25/375 (6%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A + F M+KE+ PK T +L L K + E+A ++ EM I T + +
Sbjct: 175 EAFKCFYMMKEKGIV-PKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIM 233
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ + +A + M+ L +P+V +Y+T+I E + M +
Sbjct: 234 VNVLCKEGKLKKAREFIGFMEGL-GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKG 292
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P++ T ++ G K G ++ + M+E P+ T NT++ + NKG ++
Sbjct: 293 IEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLV-PNAVTYNTLIDGYCNKGDLERA 351
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ ++ GI P T+N+L+ A + + +++ MRK + TYN +I
Sbjct: 352 FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILING 411
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI------NGYANA-GLFHKVISSVRLAS 418
+S G+AK +M ++G++ T+ LI N A LF K++
Sbjct: 412 YSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ----- 466
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
++ +V +NA++ ++ + K M K PD TF+ + + +EG
Sbjct: 467 --GVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREG--- 521
Query: 479 KVYALEQEKLQMLLE 493
+ E+ +MLL+
Sbjct: 522 -----KVEEARMLLD 531
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 143/350 (40%), Gaps = 19/350 (5%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
+Y +VLL + P+LA ++ +++ I EL+ L + R S+
Sbjct: 106 SYCLAVVLLARLPSPKLALQLLKQVMGTRIATNRELFDELTLSRDRLSV----------- 154
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ L++ C + R + + M E+ + P T N +L + K
Sbjct: 155 -------KSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNR 207
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+M VL + V+T N +++V +G++ + G P ++N
Sbjct: 208 M-EMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYN 266
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
+I Y + + +++ MR S TY ++I G + F++M
Sbjct: 267 TIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI 326
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G+ + T+ LI+GY N G + S K I +VS YN ++ A + E
Sbjct: 327 GLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEA 386
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
+ + K M++K PD+ T++I+ Y++ G K + L E L +E +
Sbjct: 387 DDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPT 436
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 124/273 (45%), Gaps = 4/273 (1%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
EM+K+ P TY L+ L G+ A + EM ++GI P Y L+ Y R
Sbjct: 357 EMVKKG--IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSR 414
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
+AF N+M + +P TY++LI R + + L++ + ++ V+P+ +
Sbjct: 415 CGNAKKAFDLHNEMLS-KGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVI 473
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
N ++ G+ G ++ +L M + + PD T NT++ +G+V+ ++
Sbjct: 474 MFNAMVDGHCANGNVERAFMLLKEM-DRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE 532
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
+ GI P+ ++N LI YG++ V + M + F T TYN +I+ +
Sbjct: 533 MKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQE 592
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
E ++M +G+ D T+ LI G N
Sbjct: 593 GDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 625
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 122/277 (44%), Gaps = 21/277 (7%)
Query: 112 AETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEG-------------------TYMKLLV 152
A ++ D ++KK ++ + +L F + + G TY L+
Sbjct: 351 AFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILIN 410
Query: 153 LLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQ 212
+ G + A + NEM+ +GIEPT YT+L+ R + + EA ++
Sbjct: 411 GYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILD-QGVS 469
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
PDV ++ ++ E L ++MD +SV P+ VT N ++ G + G ++ R+
Sbjct: 470 PDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEE-ARM 528
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
L ++ KPD + NT++S + +G + R ++ + G +P T+N LI
Sbjct: 529 LLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLC 588
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
K + D +++ M STY ++IE ++
Sbjct: 589 KNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 625
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 159/374 (42%), Gaps = 5/374 (1%)
Query: 121 KKQWFQALQVFEMLKEQPFYQP-KEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
+ QW AL + M +Q P Y ++ L K G+ A +F+EM ++G+ P
Sbjct: 189 RSQW--ALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNV 246
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
Y +++ A C+ +D+A L QM QPD TY+TLI +++ +++
Sbjct: 247 VTYNSVIHALCKARAVDKAQGILRQMVG-NGVQPDNVTYNTLIHGYSTLGQWKQAVRMFK 305
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
+M R V PNTVT + + K G ++ ML K ++ + +T+L +A
Sbjct: 306 EMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGH-KLNIISYSTLLHGYATA 364
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G + M + GI P FNIL+ Y K M + + E M+K TY
Sbjct: 365 GCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTY 424
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
VI AF MG F M +G++ + + CLI G+ G K V
Sbjct: 425 LAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRN 484
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ + + ++I+ K + E +R++ + + D F+ + + Y G +
Sbjct: 485 KGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSE 544
Query: 480 VYALEQEKLQMLLE 493
+ + + + +E
Sbjct: 545 AFRVHDAMVSVGIE 558
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 139/349 (39%), Gaps = 2/349 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY L+ GQ + A ++F EM G+ P + +A C++ I+EA
Sbjct: 278 QPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEARE 337
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ M + + ++ +YSTL+ A + L+ M + PN NI++ GY
Sbjct: 338 FFDSMLAKGH-KLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGY 396
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K GM + + M + PDV T ++ F G +D + + G++P
Sbjct: 397 AKCGMVREAMFIFEDMQKRGL-NPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPN 455
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+ LI + K ++ +R ++ ++I G + F+
Sbjct: 456 FAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFD 515
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+ G KAD F LI+GY G + + I ++ Y +++ C K
Sbjct: 516 MIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNG 575
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ + +++ + K +P + T+ I+ + G + QE ++
Sbjct: 576 RIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIE 624
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 146/340 (42%), Gaps = 5/340 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF-V 200
P TY L+ ++ + +LA F ++ +G++ + ++LL C DEA V
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE-LIETLYQDMDERSVTP-NTVTQNIVLG 258
++M L C PD +YST++K+ D R + ++ L + + P N V + V+
Sbjct: 161 LFHRMPEL-GCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVH 219
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
G K G + + M + P+V T N+++ VD + + G+
Sbjct: 220 GLFKEGKVGEACDLFHEMTQQGV-PPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQ 278
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P+ T+N LI Y + + + + M + T + + G +
Sbjct: 279 PDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREF 338
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
F+ M A+G K + ++ L++GYA AG + + L + I N +N +++ K
Sbjct: 339 FDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAK 398
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ E +++ M+++ PD T+ + A+ + G D
Sbjct: 399 CGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMD 438
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 103/242 (42%), Gaps = 2/242 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
++ L+ L K G+ A+++F+ ++ G + ++T+L+ YC + EAF + M
Sbjct: 493 SFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAM 552
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
++ +PD+ TY TL+ C R + L++++ + V P T T I+L G AG
Sbjct: 553 VSV-GIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGR 611
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+ + M+ES + T + +L+ + ++K + + N
Sbjct: 612 TAAAKEMFQEMIESGI-AVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILN 670
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
I+I K R ++ + + T TY ++E G + E F M
Sbjct: 671 IMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKS 730
Query: 386 GM 387
G+
Sbjct: 731 GL 732
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 2/162 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY +L L +G+ A+++F EM+E GI T Y+ LL CRN+ +EA
Sbjct: 593 KPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAIT 652
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
++ + N + D+ + +I A R E E L+ + + + P T I++
Sbjct: 653 VFQKLCAM-NVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENL 711
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
K G ++ E V S ML+S P +N I+ KG++
Sbjct: 712 IKEGSVEEAEGVFSVMLKSGL-SPTSHFINVIVRTLLEKGEI 752
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 152/340 (44%), Gaps = 39/340 (11%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
YM+++ L GK Q +LA ++ + M +E E +T L+ Y + L EA N+M+
Sbjct: 149 YMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGLAAEAVHAFNRME 208
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
C+PD +S +I + R ++ + + +R P+ V ++ G+ +AG
Sbjct: 209 DY-GCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDR-FEPDVVVYTSLVHGWCRAGNI 266
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
+ ERV G ++ A +P+V+T + ++ GQ+ + + + G DP TFN
Sbjct: 267 SEAERVF-GEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNN 325
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
L+ + K +K+ V M++L P + TYN +IE+
Sbjct: 326 LMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESH-------------------- 365
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
C + A K+++SV+ L N S +N + K D+
Sbjct: 366 ---------CRDDNLEEAV---KILNSVKKGCNL----NASSFNPIFGCISKLGDVNSAH 409
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
R++ +MK+ CRP++ T++I+ +A + D V L +E
Sbjct: 410 RMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKE 449
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 125/265 (47%), Gaps = 5/265 (1%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
K++ +A F+ LK++ ++P Y L+ ++G A +VF EM GI+P
Sbjct: 229 KRRAIEAQSFFDSLKDR--FEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVY 286
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
Y+ ++ A CR+ I A ++M + C P+ T++ L++ V A R E + +Y
Sbjct: 287 TYSIVIDALCRSGQITRAHDVFSEMIDV-GCDPNAITFNNLMRVHVKAGRTEKVLQVYNQ 345
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M P+ +T N ++ + + ++ ++L+ + + C + + N I + G
Sbjct: 346 MKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKKG--CNLNASSFNPIFGCISKLG 403
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
V+ R + K ++ P T T+NIL+ + K+ D + + + M + + ++TY
Sbjct: 404 DVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYR 463
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAE 385
+I F +G + F++M E
Sbjct: 464 VLISTFCGIGHWNNAYSFFKEMIEE 488
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 83/208 (39%), Gaps = 33/208 (15%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ + K+G+ E +V+N+M G P Y L+ ++CR+ ++EA
Sbjct: 318 PNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKI 377
Query: 202 LNQMKTLPN---------------------------------CQPDVYTYSTLIKACVDA 228
LN +K N C+P+ TY+ L++ D
Sbjct: 378 LNSVKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADK 437
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
+++ L ++MDE + PN T +++ + G ++ M+E +P +
Sbjct: 438 KSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPV 497
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFG 316
+L GQ+ E EK N G
Sbjct: 498 YEMVLQQLRKAGQLKKHEELVEKMVNRG 525
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 77/185 (41%), Gaps = 7/185 (3%)
Query: 308 WYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS 367
W FG PE + +I GK R +D +++ M+ T+ ++ +
Sbjct: 135 WATNLEEFGHSPEP--YMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYV 192
Query: 368 DMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL--QIAEN 425
G A + F +M G K D F +I+ + + I + L + +
Sbjct: 193 KAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKK---RRAIEAQSFFDSLKDRFEPD 249
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
V Y +++ +A ++ E ERV+ MK +P+ T+SI+ +A + G + + +
Sbjct: 250 VVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFS 309
Query: 486 EKLQM 490
E + +
Sbjct: 310 EMIDV 314
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 141/326 (43%), Gaps = 2/326 (0%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL +L K+G+ EL +++ EM+ G+ P+ + L+ CR + A ++M+ +
Sbjct: 153 LLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMR-VK 211
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
P V Y+ LI+ + E E++++ M E V PN T N ++ GY K Q
Sbjct: 212 GIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQA 271
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
R+ ML PDV T ++ G++ + F + P +N LI
Sbjct: 272 LRLYQDMLGEGLV-PDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLID 330
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
AY K + ++ + + + TY+ +I + + FE+M EG+ A
Sbjct: 331 AYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILA 390
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
++ T+ LI+G G K + ++ + NV ++ +I K +L +Y
Sbjct: 391 NSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIY 450
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEG 475
M K PD T++ M + + K G
Sbjct: 451 SEMVIKSLSPDVVTYTAMIDGHCKYG 476
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 156/351 (44%), Gaps = 8/351 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ + G A+++F+EM +GI PT +YT L+ C ++ I+EA
Sbjct: 180 PSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESM 239
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
M+ + P+VYTY+TL+ + LYQDM + P+ VT I++ G
Sbjct: 240 HRAMREV-GVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLC 298
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G + M++ + P++ N+++ + G V + + F + P+
Sbjct: 299 KFGEMKAARNLFVNMIKFSV-TPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDV 357
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T++ILI ++ ++ E M K S TYN++I+ G Q
Sbjct: 358 FTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQ 417
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI---AENVSFYNAVISACIK 438
M G++ + TF LI+GY + +++ + S++ I + +V Y A+I K
Sbjct: 418 MTENGVEPNVITFSTLIDGYCK---IRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCK 474
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ E ++Y M + P+ T S + + K+G L EK++
Sbjct: 475 YGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIE 525
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 130/330 (39%), Gaps = 38/330 (11%)
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
TP +Y L+ C+ L++EA +++ Q + L+ V RFEL+ +
Sbjct: 114 TPNVYGELIIVLCKMELVEEALSMYHKVGAALTIQ----ACNVLLYVLVKTGRFELLWRI 169
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAG-------MFDQME-------RVLSGMLESATCK 283
Y++M ++P+ +T ++ G + G MFD+M ++ +L C
Sbjct: 170 YEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCS 229
Query: 284 --------------------PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
P+V+T NT++ + R Y+ G+ P+ T
Sbjct: 230 DNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVT 289
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
F ILI K ++ M K + YN++I+A+ +GD F ++
Sbjct: 290 FGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELE 349
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
+ D T+ LI G + + + +K I N YN++I C K +
Sbjct: 350 RFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMD 409
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ + +M E P+ TFS + + Y K
Sbjct: 410 KALEICSQMTENGVEPNVITFSTLIDGYCK 439
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 135/305 (44%), Gaps = 23/305 (7%)
Query: 76 VSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHV-----LKKQWFQALQV 130
+ E +P + I L K E KA +VN + + + ++ L + + V
Sbjct: 279 LGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDV 338
Query: 131 FEMLK-----EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
E + E+ P TY L+ L + E A +F +M +EGI Y +L
Sbjct: 339 SEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSL 398
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ +D+A +QM T +P+V T+STLI + +Y +M +S
Sbjct: 399 IDGCCKEGKMDKALEICSQM-TENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKS 457
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV-DM 304
++P+ VT ++ G+ K G + ++ S ML++ P+ +T++ +L G++ D
Sbjct: 458 LSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGI-TPNCYTISCLLDGLCKDGKISDA 516
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+E + EK I+ +T N+ G G K +++ + Y + ++ ++
Sbjct: 517 LELFTEK-----IEFQTPRCNVDAG--GSK---PSLTNHVAYTALIHGLCQDGQFSKAVK 566
Query: 365 AFSDM 369
FSDM
Sbjct: 567 LFSDM 571
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 164/372 (44%), Gaps = 9/372 (2%)
Query: 121 KKQWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
+ + +A ++F EML++ P ++ L+ + ++ + A F +M + G+ P
Sbjct: 236 RDNFSEAKEIFGEMLRQGVV--PDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDN 293
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+YT L+ YCRN + EA ++M C DV Y+T++ + L+
Sbjct: 294 VIYTVLMHGYCRNGNMLEALKIRDEMLE-QGCVLDVIAYNTILNGLCKEKMLTDADKLFD 352
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS--GMLESATCKPDVWTMNTILSVFA 297
+M ER P+ T ++ G+ + G M + LS G + KPD+ NT++ F
Sbjct: 353 EMVERGALPDFYTFTTLIHGHCQDG---NMTKALSLFGTMTQRNIKPDIVAYNTLIDGFC 409
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
G+++ ++ + I P T+ ILI AY + + + M + T
Sbjct: 410 KVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLV 469
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
T N VI+ + GD+ + +M A+G+ D ++ LING+ K +
Sbjct: 470 TCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKM 529
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
K + ++ YN V++ + + E E V ++M EK PD T++ + + +
Sbjct: 530 EKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNL 589
Query: 478 DKVYALEQEKLQ 489
++ + E LQ
Sbjct: 590 NEAFRFHDEMLQ 601
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 142/330 (43%), Gaps = 2/330 (0%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L K G+ + + +EM GI Y L+ AYCR L++EAF +N M +P
Sbjct: 128 LCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMAD-KGLKP 186
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
++TY+ +I R+ + + +M ++P+T T N +L + F + + +
Sbjct: 187 SLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIF 246
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
ML PD+ + +++++VF+ +D ++ + FG+ P+ + +L+ Y +
Sbjct: 247 GEMLRQGVV-PDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCR 305
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+ + + M + YN ++ + F++M G D T
Sbjct: 306 NGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYT 365
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
F LI+G+ G K +S ++ I ++ YN +I K ++ + ++ M
Sbjct: 366 FTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMI 425
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ P+ T+ I+ AY G + + L
Sbjct: 426 SRKIFPNHITYGILINAYCSVGHVSEAFRL 455
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 153/367 (41%), Gaps = 7/367 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A ++ + ++ +P TY ++ L K G+ A+ + EM+ G+ P Y L
Sbjct: 171 EAFEIMNSMADKGL-KPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTL 229
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L CR EA +M PD+ ++S+LI + ++DM +
Sbjct: 230 LVESCRRDNFSEAKEIFGEMLR-QGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFG 288
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+ V +++ GY + G + ++ MLE C DV NTIL+ + +
Sbjct: 289 LVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQG-CVLDVIAYNTILNGLCKEKMLTDA 347
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++ +++ G P+ TF LI + + K S+ M + YN +I+
Sbjct: 348 DKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDG 407
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
F +G+ + ++ M + + + T+ LIN Y + G + + + I
Sbjct: 408 FCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPT 467
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY---- 481
+ N VI ++ D + + RM K PD +++ + + +E DK +
Sbjct: 468 LVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWIN 527
Query: 482 ALEQEKL 488
+E+E L
Sbjct: 528 KMEKEGL 534
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 123/299 (41%), Gaps = 37/299 (12%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A K+F+EMVE G P +T L+ +C++ + +A M T N +PD+ Y+TLI
Sbjct: 347 ADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM-TQRNIKPDIVAYNTLI 405
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
E L+ M R + PN +T I++ Y G + R+ M+E
Sbjct: 406 DGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGI- 464
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
KP + T NT++ + G + + + G+ P+ ++N LI + ++ DK
Sbjct: 465 KPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDK--- 521
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
F W + +M EG+ D T+ ++NG+
Sbjct: 522 --------AFLWIN------------------------KMEKEGLLPDIITYNVVMNGFC 549
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
G + +R + I + S Y A+I+ + D+L E R + M ++ PD
Sbjct: 550 RQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDD 608
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 107/258 (41%), Gaps = 1/258 (0%)
Query: 219 STLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
++L+ V EL +++++ + N T NI++ K G FD ++ LS M E
Sbjct: 87 NSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEM-E 145
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
D+ T NT++ + +G ++ + G+ P T+N +I KK Y
Sbjct: 146 GNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYA 205
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+ ++ M + ++TYN ++ + + F +M +G+ D +F LI
Sbjct: 206 RAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLI 265
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
++ + + R K + + Y ++ + +++E ++ M E+ C
Sbjct: 266 AVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCV 325
Query: 459 PDSETFSIMTEAYAKEGM 476
D ++ + KE M
Sbjct: 326 LDVIAYNTILNGLCKEKM 343
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 94/212 (44%), Gaps = 11/212 (5%)
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNF---GIDPETRTFNILIGAYGKKRMYDKMSSVM 344
++N S+ ++D +E +E R GI+ T NI++ A K +D + S +
Sbjct: 82 SINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFL 141
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA---EGMKADTKTFCCLINGY 401
M TYN +I A+ G +E FE M++ +G+K T+ +ING
Sbjct: 142 SEMEGNGIYADMVTYNTLIGAYCREG---LLEEAFEIMNSMADKGLKPSLFTYNAIINGL 198
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
G + + + + ++ + + YN ++ + D+ E + ++ M + PD
Sbjct: 199 CKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDL 258
Query: 462 ETFSIMTEAYAKEGMNDK--VYALEQEKLQML 491
+FS + +++ D+ VY + +K ++
Sbjct: 259 VSFSSLIAVFSRNRHLDQALVYFRDMKKFGLV 290
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 1/132 (0%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
+SG A + M+ +G+ P Y L+ + R +D+AF+ +N+M+ PD+
Sbjct: 480 RSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEK-EGLLPDI 538
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
TY+ ++ R + E + + M E+ + P+ T ++ G+ ++ R
Sbjct: 539 ITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDE 598
Query: 276 MLESATCKPDVW 287
ML+ DV+
Sbjct: 599 MLQRGFAPDDVF 610
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 140/341 (41%), Gaps = 37/341 (10%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ L K G+ E A ++ M+ G +P + L+ YCR + A L++M
Sbjct: 82 TYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM 141
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ N P +Y +I L L + M + PN V + ++ GY G
Sbjct: 142 EK-RNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGR 200
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
++ R+L GM S PD++ N I+S + G+++ + + + G+ P+ TF
Sbjct: 201 IEEARRLLDGMSCSGV-APDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFG 259
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
I Y K KM+ +Y F++M
Sbjct: 260 AFILGYSKT---GKMTEAAKY--------------------------------FDEMLDH 284
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G+ + + LING+ AG + +S R L + +V +A I +K + E
Sbjct: 285 GLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEA 344
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+V+ +KEK PD T+S + + K+G +K + L E
Sbjct: 345 LKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDE 385
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 151/363 (41%), Gaps = 44/363 (12%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P T+ ++ K+G+ A K F+EM++ G+ P LYT L+ + + + EA
Sbjct: 252 KPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALS 311
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ L PDV T S I + R + ++ ++ E+ + P+ T + ++ G+
Sbjct: 312 IFRHLHAL-GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGF 370
Query: 261 GKAGMFDQM-----ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
K G ++ E L G+ P+++ N ++ G + + ++
Sbjct: 371 CKQGEVEKAFELHDEMCLKGI------APNIFIYNALVDGLCKSGDIQRARKLFDGMPEK 424
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G++P++ T++ +I Y K + S+ M S YN ++ GD +
Sbjct: 425 GLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKA 484
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISSVRLASKLQIAENVSF 428
F +M +G A T +F LI+GY + LF ++I+ QI +
Sbjct: 485 MNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAK-------QIMPDHVT 536
Query: 429 YNAVISACIKADDLMEMERVYKRMKE-----------------KHCRPDSETFSIMTEAY 471
Y VI KA + E ++K M+E K +PD T+ ++ A+
Sbjct: 537 YTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAH 596
Query: 472 AKE 474
KE
Sbjct: 597 CKE 599
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/367 (19%), Positives = 154/367 (41%), Gaps = 29/367 (7%)
Query: 114 TFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE 173
+ ++ +L+K F L+ P Y L++ G+ E AR++ + M
Sbjct: 167 SLANKLLEKMTFSGLK------------PNVVVYSTLIMGYASEGRIEEARRLLDGMSCS 214
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
G+ P Y A+++ + ++EA L +++ +PD T+ I +
Sbjct: 215 GVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQG-RGLKPDAVTFGAFILGYSKTGKMTE 273
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
+ +M + + PN +++ G+ KAG + + L + PDV T + +
Sbjct: 274 AAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFR-HLHALGVLPDVQTCSAFI 332
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
G+V + + + + G+ P+ T++ LI + K+ +K + + M
Sbjct: 333 HGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIA 392
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA-------GL 406
YN +++ GD + F+ M +G++ D+ T+ +I+GY + L
Sbjct: 393 PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSL 452
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
FH++ S + + YNA++ C K D+ + +++ M +K + +F+
Sbjct: 453 FHEMPSK-------GVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNT 504
Query: 467 MTEAYAK 473
+ + Y K
Sbjct: 505 LIDGYCK 511
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 120/306 (39%), Gaps = 37/306 (12%)
Query: 170 MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM 229
M E+G+ P YT + A CR ++EA +T +M+ +PD S LI +
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQK-TGLKPDYNACSALIDGFMREG 59
Query: 230 RFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM 289
+ + + M + N +T N+++ G K G ++ +L GM+
Sbjct: 60 DIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMI------------ 107
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
G P +RTF +LI Y ++ + +++ M K
Sbjct: 108 ------------------------TLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEK 143
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
++ +Y +I D E+M G+K + + LI GYA+ G +
Sbjct: 144 RNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEE 203
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+ S +A ++ YNA+IS KA + E ++ + +PD+ TF
Sbjct: 204 ARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFIL 263
Query: 470 AYAKEG 475
Y+K G
Sbjct: 264 GYSKTG 269
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 143/334 (42%), Gaps = 3/334 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P Y ++ L K+G+ E A E+ G++P + A + Y + + EA
Sbjct: 218 PDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKY 277
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
++M P+ Y+ LI A ++++ + V P+ T + + G
Sbjct: 278 FDEMLD-HGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLL 336
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G + +V S + E PDV+T ++++S F +G+V+ +++ GI P
Sbjct: 337 KNGRVQEALKVFSELKEKGLV-PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 395
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+N L+ K + + + M + S TY+ +I+ + + F +
Sbjct: 396 FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 455
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M ++G++ + + L++G G K ++ R + A +SF N +I K+
Sbjct: 456 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSF-NTLIDGYCKSCK 514
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ E ++++ M K PD T++ + + + K G
Sbjct: 515 IQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAG 548
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 134/314 (42%), Gaps = 55/314 (17%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P Y L+ L KSG + ARK+F+ M E+G+EP Y+ ++ YC++ + EAF
Sbjct: 393 PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSL 452
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
++M + QP + Y+ L+ C E L+++M ++ T++ N ++ GY
Sbjct: 453 FHEMPS-KGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYC 510
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD--------MMER------ 307
K+ + ++ M+ + PD T T++ G+++ M ER
Sbjct: 511 KSCKIQEASQLFQEMI-AKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDT 569
Query: 308 ---WYEKFRNFGIDPETRTFNILIGAYGKK-------RMYDKM----------------- 340
+EK G+ P+ T+ ++I A+ K+ ++ D++
Sbjct: 570 VFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLIT 629
Query: 341 -----------SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
S +++ M +L + + + ++ +F + G FE + + G+
Sbjct: 630 ALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVP 689
Query: 390 DTKTFCCLINGYAN 403
DT T L+NG N
Sbjct: 690 DTTTLIDLVNGNLN 703
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 152/337 (45%), Gaps = 16/337 (4%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ + K G+ E A +F++MVE G+ P Y L+ YC ++ AF
Sbjct: 316 EPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFS 375
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
++M P V TY+ L+ A R + + ++M ++ + P+ +T NI++ GY
Sbjct: 376 YRDEM-VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGY 434
Query: 261 GKAG----MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG 316
+ G FD +LS +E P T +++ V + + ++ + +EK + G
Sbjct: 435 SRCGNAKKAFDLHNEMLSKGIE-----PTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 489
Query: 317 IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME 376
+ P+ FN ++ + ++ +++ M + P T+N +++ G +
Sbjct: 490 VSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEAR 549
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK-LQIAENVSF--YNAVI 433
++M G+K D ++ LI+GY G + + R+ + L I N + YNA+I
Sbjct: 550 MLLDEMKRRGIKPDHISYNTLISGYGRRG---DIKDAFRVRDEMLSIGFNPTLLTYNALI 606
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
K + E + K M K PD T+ + E
Sbjct: 607 KCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 643
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 151/369 (40%), Gaps = 11/369 (2%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
W ++F + Y T+ ++ +L K G+ + AR+ M G +P Y
Sbjct: 234 WVLYAEMFRLRISSTVY-----TFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYN 288
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
++ Y I+ A L+ M+ + +PD YTY +LI R E L+ M E
Sbjct: 289 TIIHGYSSRGNIEGARRILDAMR-VKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVE 347
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT--CKPDVWTMNTILSVFANKGQ 301
+ PN VT N ++ GY G +ER S E P V T N ++ +G+
Sbjct: 348 IGLVPNAVTYNTLIDGYCNKG---DLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGR 404
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ + ++ R GI P+ T+NILI Y + K + M T TY +
Sbjct: 405 MGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTS 464
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+I S K + FE++ +G+ D F +++G+ G + ++ +
Sbjct: 465 LIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKS 524
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
+ + +N ++ + + E + MK + +PD +++ + Y + G +
Sbjct: 525 VPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAF 584
Query: 482 ALEQEKLQM 490
+ E L +
Sbjct: 585 RVRDEMLSI 593
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 165/375 (44%), Gaps = 25/375 (6%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A + F M+KE+ PK T +L L K + E+A ++ EM I T + +
Sbjct: 197 EAFKCFYMMKEKGIV-PKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIM 255
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ + +A + M+ L +P+V +Y+T+I E + M +
Sbjct: 256 VNVLCKEGKLKKAREFIGFMEGL-GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKG 314
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P++ T ++ G K G ++ + M+E P+ T NT++ + NKG ++
Sbjct: 315 IEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLV-PNAVTYNTLIDGYCNKGDLERA 373
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ ++ GI P T+N+L+ A + + +++ MRK + TYN +I
Sbjct: 374 FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILING 433
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI------NGYANA-GLFHKVISSVRLAS 418
+S G+AK +M ++G++ T+ LI N A LF K++
Sbjct: 434 YSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ----- 488
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
++ +V +NA++ ++ + K M K PD TF+ + + +EG
Sbjct: 489 --GVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREG--- 543
Query: 479 KVYALEQEKLQMLLE 493
+ E+ +MLL+
Sbjct: 544 -----KVEEARMLLD 553
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 143/350 (40%), Gaps = 19/350 (5%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
+Y +VLL + P+LA ++ +++ I EL+ L + R S+
Sbjct: 128 SYCLAVVLLARLPSPKLALQLLKQVMGTRIATNRELFDELTLSRDRLSV----------- 176
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ L++ C + R + + M E+ + P T N +L + K
Sbjct: 177 -------KSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNR 229
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+M VL + V+T N +++V +G++ + G P ++N
Sbjct: 230 M-EMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYN 288
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
+I Y + + +++ MR S TY ++I G + F++M
Sbjct: 289 TIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI 348
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G+ + T+ LI+GY N G + S K I +VS YN ++ A + E
Sbjct: 349 GLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEA 408
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
+ + K M++K PD+ T++I+ Y++ G K + L E L +E +
Sbjct: 409 DDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPT 458
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 124/273 (45%), Gaps = 4/273 (1%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
EM+K+ P TY L+ L G+ A + EM ++GI P Y L+ Y R
Sbjct: 379 EMVKKG--IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSR 436
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
+AF N+M + +P TY++LI R + + L++ + ++ V+P+ +
Sbjct: 437 CGNAKKAFDLHNEMLS-KGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVI 495
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
N ++ G+ G ++ +L M + + PD T NT++ +G+V+ ++
Sbjct: 496 MFNAMVDGHCANGNVERAFMLLKEM-DRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE 554
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
+ GI P+ ++N LI YG++ V + M + F T TYN +I+ +
Sbjct: 555 MKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQE 614
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
E ++M +G+ D T+ LI G N
Sbjct: 615 GDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 647
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 120/277 (43%), Gaps = 21/277 (7%)
Query: 112 AETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEG-------------------TYMKLLV 152
A ++ D ++KK ++ + +L F + + G TY L+
Sbjct: 373 AFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILIN 432
Query: 153 LLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQ 212
+ G + A + NEM+ +GIEPT YT+L+ R + + EA ++
Sbjct: 433 GYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILD-QGVS 491
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
PDV ++ ++ E L ++MD +SV P+ VT N ++ G + G ++ +
Sbjct: 492 PDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARML 551
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
L M KPD + NT++S + +G + R ++ + G +P T+N LI
Sbjct: 552 LDEMKRRGI-KPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLC 610
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
K + D +++ M STY ++IE ++
Sbjct: 611 KNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 647
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 170/386 (44%), Gaps = 14/386 (3%)
Query: 108 VNTVAETFSDHVLKKQWF------QALQVFEML-KEQPFYQPKEGTYMKLLVLLGKSGQP 160
+ V + FS ++ K+ QAL + M+ KE+ P TY ++ K G+
Sbjct: 73 LGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKI 132
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTY 218
A +++EM+++G P + +++ A C+ +D A + L QM +P P+ TY
Sbjct: 133 GKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVP---PNKVTY 189
Query: 219 STLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
+++I R+E ++++M R + P+ V+ N + K G + + M
Sbjct: 190 TSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAA 249
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
+P++ T +L +A +G M ++ + GI F ILI AY K+ M D
Sbjct: 250 KGH-RPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMD 308
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+ ++ M+ TY+ +I A MG F QM G++ +T + LI
Sbjct: 309 EAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLI 368
Query: 399 NGYANAGLFHKVISSVRLASKLQIAE-NVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
G+ G K V I N++F+N+++ + K +M+ ++ +K+
Sbjct: 369 QGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGE 428
Query: 458 RPDSETFSIMTEAYAKEGMNDKVYAL 483
R D F+ + + Y G K +++
Sbjct: 429 RSDIIMFNTLIDGYCLVGEMGKAFSV 454
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 141/336 (41%), Gaps = 3/336 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY ++ ++ +PEL F ++ G++ +L C D+A
Sbjct: 6 PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM--DERSVTPNTVTQNIVLGG 259
L + T C PD ++Y+ ++K D R + L + M +E +P+ VT N V+ G
Sbjct: 66 LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ K G + + M++ PDV T N+I++ VD E + + G+ P
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFV-PDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPP 184
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
T+ +I Y +++ + + M ++N+ +++ G +K F
Sbjct: 185 NKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIF 244
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
M A+G + + T+ L++GYA G F ++S I N + +I A K
Sbjct: 245 YSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKR 304
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ E + M+ + PD T+S + A + G
Sbjct: 305 GMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMG 340
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/405 (21%), Positives = 162/405 (40%), Gaps = 41/405 (10%)
Query: 106 AWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARK 165
+W N+ ++ H K+ A ++F + + ++P TY LL G
Sbjct: 223 SW-NSFMDSLCKHGRSKE---AAEIFYSMAAKG-HRPNIVTYGILLHGYATEGCFADMMS 277
Query: 166 VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC 225
FN M +GI ++T L+ AY + ++DEA + L++M+ PDV+TYSTLI A
Sbjct: 278 FFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQG-QGLSPDVFTYSTLISAL 336
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
R + M V PNTV + ++ G+ G + + ++ M+ + +P+
Sbjct: 337 CRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPN 396
Query: 286 VWTMNTILSVFANKGQV-----------DMMER------------------------WYE 310
+ N+I+ +G+V D+ ER +
Sbjct: 397 IAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLD 456
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
+ GI P+T T+N L+ Y K D ++ M + T+ TYN +++ G
Sbjct: 457 AMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAG 516
Query: 371 DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYN 430
+ +M G T+ ++ G + I + + + N++ N
Sbjct: 517 RTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLN 576
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+I++ E + ++ + + P++ T+ IM KEG
Sbjct: 577 TMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEG 621
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 95/196 (48%), Gaps = 9/196 (4%)
Query: 113 ETFSDHVLKKQWFQA------LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKV 166
+TF+ + L +F++ L +F + ++ +P TY +L L ++G+ A+K+
Sbjct: 466 DTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKI-KPTTVTYNIILDGLFRAGRTVAAQKM 524
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
+EM+ G + Y +L CRN+ DEA V ++ T+ N + ++ T +T+I +
Sbjct: 525 LHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTM-NVKFNITTLNTMINSMY 583
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
R E + L+ + + + PN T I++ K G ++ + + S M E + C P
Sbjct: 584 TVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSM-EKSGCAPCS 642
Query: 287 WTMNTILSVFANKGQV 302
+N + KG++
Sbjct: 643 RLLNDTIRTLLEKGEI 658
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 106/257 (41%), Gaps = 3/257 (1%)
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
V+EM+ +P + ++ + K G+ A +F+ + + G ++ L+ Y
Sbjct: 384 VYEMM-NNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGY 442
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
C + +AF L+ M + PD +TY+TL+ + R + L+++M ++ + P
Sbjct: 443 CLVGEMGKAFSVLDAMIS-AGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPT 501
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
TVT NI+L G +AG +++L M+ T + T N IL D +
Sbjct: 502 TVTYNIILDGLFRAGRTVAAQKMLHEMIGCGT-TVSLPTYNIILKGLCRNNCTDEAIVMF 560
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
+K + T N +I + + ++ + + +STY +I
Sbjct: 561 QKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKE 620
Query: 370 GDAKHMEYTFEQMHAEG 386
G + + F M G
Sbjct: 621 GSVEEADNMFSSMEKSG 637
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 169/376 (44%), Gaps = 4/376 (1%)
Query: 109 NTVAETFSDHVLKKQWF-QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
N T D + KK +A + +K + + P T+ L+V + G + A V
Sbjct: 232 NITYNTILDGLCKKGRLNEARDLLLDMKNKGLF-PNRTTFNILVVGCCRLGWLKEAANVI 290
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
M + + P Y +++ +C+ I EA +M+ L PDV TY+TLI C +
Sbjct: 291 ELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENL-KLSPDVVTYNTLINGCFE 349
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
E L ++M+ R + PN+VT N+++ + K G D++++ + M ES C PD+
Sbjct: 350 HGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESG-CLPDIV 408
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T NT++S G++D R ++ G+ + T N ++ A ++R D+ ++
Sbjct: 409 TYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSA 468
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
R+ + +Y +I + A +++M + + T+ +I G G
Sbjct: 469 RRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKT 528
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
++ I + + + + YN +I + + + + + +M EK+ +PD T + +
Sbjct: 529 NQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTL 588
Query: 468 TEAYAKEGMNDKVYAL 483
KEGM +K L
Sbjct: 589 LCGLCKEGMLEKALKL 604
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 131/304 (43%), Gaps = 5/304 (1%)
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV---DAMRFELIETLYQDMD 242
+ AY +A N+MK L QP + T +TL+ A V + L + ++ D
Sbjct: 131 IGAYVACGRPHQAAQIFNRMKRL-GMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFI 189
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
+ V NT + NI++ G F + RVL G + C PD T NTIL KG++
Sbjct: 190 KIGVKINTNSFNILIHGSCMENRFGEAIRVL-GKMRDYGCPPDNITYNTILDGLCKKGRL 248
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ +N G+ P TFNIL+ + + ++V+E M + + TYN +
Sbjct: 249 NEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVM 308
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I F G E+M + D T+ LING G + + +
Sbjct: 309 ISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGM 368
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
N YN ++ +K + E+++ ++M+E C PD T++ + + K G D+ +
Sbjct: 369 KPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFR 428
Query: 483 LEQE 486
L E
Sbjct: 429 LMDE 432
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 141/361 (39%), Gaps = 41/361 (11%)
Query: 126 QALQVFEMLKEQPFYQPKE---GTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
QA Q+F +K QP T + LV S L++ VF + ++ G++ +
Sbjct: 142 QAAQIFNRMKRLGM-QPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSF 200
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
L+ C + EA L +M+ C PD TY+T++ R L DM
Sbjct: 201 NILIHGSCMENRFGEAIRVLGKMRDY-GCPPDNITYNTILDGLCKKGRLNEARDLLLDMK 259
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
+ + PN T NI++ G + G + V+ M +++ PD WT
Sbjct: 260 NKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVV-PDAWT-------------- 304
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+N++I + K+ + + E M L+ TYN +
Sbjct: 305 ---------------------YNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTL 343
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I + G ++ E+M GMK ++ T+ ++ + G +V +VR +
Sbjct: 344 INGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGC 403
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
++ YN +IS K + E R+ M K + D T + M A +E D+ +
Sbjct: 404 LPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHD 463
Query: 483 L 483
L
Sbjct: 464 L 464
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 104/243 (42%), Gaps = 18/243 (7%)
Query: 254 NIVLGGYGKAG-------MFDQMERVLSGMLESATCKPDVWTMNTILSV---FANKGQVD 303
+I +G Y G +F++M+R+ GM +P + T NT+L+ F + +
Sbjct: 128 DISIGAYVACGRPHQAAQIFNRMKRL--GM------QPTLLTCNTLLNALVRFPSSHSIR 179
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ + + F G+ T +FNILI + + + V+ MR P + TYN ++
Sbjct: 180 LSKAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTIL 239
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
+ G M +G+ + TF L+ G G + + + L S+ +
Sbjct: 240 DGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVV 299
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ YN +IS K + E R+ + M+ PD T++ + + G +++ + L
Sbjct: 300 PDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKL 359
Query: 484 EQE 486
+E
Sbjct: 360 IEE 362
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 113/279 (40%), Gaps = 35/279 (12%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ K G+ + A ++ +EM +G++ +L A CR +DEA
Sbjct: 405 PDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDL 464
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L + +V +Y TLI + L+ +M E+ + P+ +T N ++ G
Sbjct: 465 LCSARRRGYFVDEV-SYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLC 523
Query: 262 KAGMFDQMERVLSGMLESATC----------------------------------KPDVW 287
+ G +Q L +LES KPDV
Sbjct: 524 QMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVV 583
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T NT+L +G ++ + + + + G D + ++N +I + K++ + + ++E M
Sbjct: 584 TCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEM 643
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
+ + TYN ++ +D G K E ++ +G
Sbjct: 644 EEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKG 682
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 2/155 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QA+ + L E P E TY ++ + GQ E A + N+MVE+ +P L
Sbjct: 530 QAIDKLDELLESGLV-PDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTL 588
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L C+ ++++A N + D +Y+T+I + RF L ++M+E+
Sbjct: 589 LCGLCKEGMLEKALKLFNTWISKGK-DVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKK 647
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
+ P+ T N +LGG AG E +S + E
Sbjct: 648 LGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKG 682
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 2/124 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A Q + E+ F +P T LL L K G E A K+FN + +G + Y +
Sbjct: 565 KAFQFHNKMVEKNF-KPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTI 623
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + C+ EAF L +M+ PD YTY+ ++ DA R + E + E+
Sbjct: 624 ILSLCKEKRFGEAFDLLEEMEE-KKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKG 682
Query: 246 VTPN 249
+ N
Sbjct: 683 KSEN 686
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 175/385 (45%), Gaps = 9/385 (2%)
Query: 98 LERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKS 157
L +K KA V T A FS ++ A +++E TY L+ L KS
Sbjct: 133 LMQKQIVKANVGTFATVFSGVGVQGGLRSAPVALPVMREAGM-SLNGYTYNGLIYFLVKS 191
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
G A +V+ MVE+GI P+ Y+ L+ ++ + +D LN+M+ +P+VY+
Sbjct: 192 GFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEA-RGVKPNVYS 250
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y+ I+ A RF+ + M++ P+ VT +V+ AG + V M
Sbjct: 251 YTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKM- 309
Query: 278 ESATCKPDVWTMNTILSVFANKGQV-DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
+++ KPD T T+L + G +ME W + G + ++ ++ A +
Sbjct: 310 KASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVAD-GYNDNIVSYTAVVDALCQVGR 368
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAF--SDMGDAKHMEYTFEQMHAEGMKADTKTF 394
D+ +V + M++ +YN++I F +DM D + +E F M+A G + T
Sbjct: 369 LDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFD-RALEL-FNHMNACGPSPNGYTH 426
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
IN Y +G K I I +V+ NAV+S+ ++ L +RV+ +K+
Sbjct: 427 VLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKD 486
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDK 479
PD+ T+++M + +K D+
Sbjct: 487 MGVSPDTITYTMMIKCCSKASKADE 511
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 157/346 (45%), Gaps = 9/346 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF-V 200
P E TY +L +GKS + E +V EM +G E T Y +++ ++ +++A +
Sbjct: 806 PDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDL 865
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
N M P TY L+ + A + E L+ +M E PN NI+L G+
Sbjct: 866 YYNLMSE--GFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGH 923
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
AG + + ++ M+E PD+ + ++ G+++ ++ + G++P+
Sbjct: 924 RIAGNTENVCQIFEKMVEQGI-NPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPD 982
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+N+LI GK ++ + M+K TYN++I G A +E
Sbjct: 983 LIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYE 1042
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
++ +G K + T+ LI GY+ +G ++ +A VS A+IS + +
Sbjct: 1043 ELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAYDC-----VAVGVSLKTALISGLVDEN 1097
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ E ++ MK + C PD T++++ +A K +++ +++E
Sbjct: 1098 LINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKSMRIEEMLKVQEE 1143
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 148/335 (44%), Gaps = 4/335 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY+ LL G SG + +++N MV +G YTA++ A C+ +DEA
Sbjct: 315 KPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALA 374
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
++MK P+ Y+Y++LI + A F+ L+ M+ +PN T + + Y
Sbjct: 375 VFDEMKE-KGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYY 433
Query: 261 GKAGM-FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
GK+G ++R ++S PDV N +LS A G++ M +R + + ++ G+ P
Sbjct: 434 GKSGQSLKAIQRYEH--MKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSP 491
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+T T+ ++I K D+ + M + N++I+ G F
Sbjct: 492 DTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLF 551
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
Q+ ++ T+ L++G G +V+ + + N+ YN V+ K
Sbjct: 552 HQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKN 611
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
++ + M EK C PD +++ + KE
Sbjct: 612 GEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKE 646
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 161/383 (42%), Gaps = 54/383 (14%)
Query: 107 WVNTVAETFSDHVLK-----------KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLG 155
W VA+ ++D+++ + +AL VF+ +KE+ P++ +Y L+
Sbjct: 341 WNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGI-SPEQYSYNSLISGFL 399
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAA--YCRNSLIDEAFVTLNQMKTLPNCQP 213
K+ + A ++FN M G P+P YT +L Y ++ +A MK+ P
Sbjct: 400 KADMFDRALELFNHMNACG--PSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKS-KGIVP 456
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
DV + ++ + + R + + ++ ++ + V+P+T+T +++ KA D+
Sbjct: 457 DVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFF 516
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
S M+E+ C PDV +N+++ G+ + + + + + I+P T+N L+ G+
Sbjct: 517 SDMVETG-CVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGR 575
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+ ++ ++E M P TYN V++ S G+ M +G D
Sbjct: 576 EGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPD--- 632
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+S YN V+ IK + E R++ +MK
Sbjct: 633 --------------------------------LSSYNTVMYGLIKEERFEEAFRMFCQMK 660
Query: 454 EKHCRPDSETFSIMTEAYAKEGM 476
K PD T + ++ K G+
Sbjct: 661 -KILAPDYATLCTILPSFVKNGL 682
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/399 (20%), Positives = 159/399 (39%), Gaps = 56/399 (14%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A ++F LKE +P GTY LL LG+ G+ + + EM P Y +
Sbjct: 546 EAWKLFHQLKEMKI-EPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTV 604
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L +N ++ A L M T C PD+ +Y+T++ + RFE ++ M ++
Sbjct: 605 LDCLSKNGEVNCAIGMLYSM-TEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQM-KKI 662
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM- 304
+ P+ T +L + K G+ + + + A C D + ++++ NK V+
Sbjct: 663 LAPDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKS 722
Query: 305 ----------------------------------MERWYEKFRNFGIDPETRTFNILIGA 330
+ + KF+ G+ +T ++N LI
Sbjct: 723 IEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRG 782
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
+ + D + M++L TYN +++A + M +MH +G ++
Sbjct: 783 LVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYEST 842
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV---------SFYNAVISACIKADD 441
T+ +I+G ++ S RL + + N+ Y ++ +KA
Sbjct: 843 YVTYNTIISG---------LVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGK 893
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+++ E ++ M E C+P+ ++I+ + G + V
Sbjct: 894 MVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENV 932
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 131/320 (40%), Gaps = 2/320 (0%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A ++FN+ G+ Y +L+ +LID A +MK L C PD +TY+ ++
Sbjct: 757 AHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRL-GCGPDEFTYNLIL 815
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
A +MR E + + +M + VT N ++ G K+ +Q + ++ S
Sbjct: 816 DAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLM-SEGF 874
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
P T +L G++ E + + +G P +NIL+ + + +
Sbjct: 875 SPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQ 934
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+ E M + +Y +I+ G F Q+ G++ D + LI+G
Sbjct: 935 IFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLG 994
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
+ + + K I N+ YN++I KA E ++Y+ + K +P+
Sbjct: 995 KSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVF 1054
Query: 463 TFSIMTEAYAKEGMNDKVYA 482
T++ + Y+ G D YA
Sbjct: 1055 TYNALIRGYSVSGSTDNAYA 1074
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 140/319 (43%), Gaps = 10/319 (3%)
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ C++ EA N+ K L +Y++LI+ VD ++ E L+ +M
Sbjct: 744 LIRHLCKHKKALEAHQLFNKFKGL-GVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRL 802
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
P+ T N++L GK+ ++M RV + M + T NTI+S +++
Sbjct: 803 GCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGY-ESTYVTYNTIISGLVKSKRLEQ 861
Query: 305 MERWYEKFRNFGIDPETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
Y + G P T+ L+ G +M D + E + P + YN ++
Sbjct: 862 AIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKP-NCTIYNILL 920
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
G+ +++ FE+M +G+ D K++ LI+ AG + +S R +L +
Sbjct: 921 NGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLE 980
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
++ YN +I K++ + E ++ MK+K P+ T++ + K G + +
Sbjct: 981 PDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQM 1040
Query: 484 EQEKLQMLLEASGHWQQNI 502
+E +L++ W+ N+
Sbjct: 1041 YEE---LLIKG---WKPNV 1053
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 108/238 (45%), Gaps = 4/238 (1%)
Query: 94 LKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVL 153
++ ++ RK +V T S V K+ QA+ ++ L + F P TY LL
Sbjct: 830 VQAEMHRKGYESTYV-TYNTIISGLVKSKRLEQAIDLYYNLMSEGF-SPTPCTYGPLLDG 887
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L K+G+ A +FNEM+E G +P +Y LL + R + E + + P
Sbjct: 888 LLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGH-RIAGNTENVCQIFEKMVEQGINP 946
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
D+ +Y+ LI A R + ++ + E + P+ + N+++ G GK+ ++ +
Sbjct: 947 DIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLF 1006
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+ M + P+++T N+++ G+ + YE+ G P T+N LI Y
Sbjct: 1007 NEMKKKGIV-PNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGY 1063
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/401 (20%), Positives = 172/401 (42%), Gaps = 52/401 (12%)
Query: 129 QVFEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+V +L+E + P TY +L L K+G+ A + M E+G P Y ++
Sbjct: 581 EVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVM 640
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV-DAMRFELIETLYQDMDERS 245
+ +EAF QMK + PD T T++ + V + + E + T+ + + +
Sbjct: 641 YGLIKEERFEEAFRMFCQMKKI--LAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAD 698
Query: 246 V-TPNTVTQNIVLGGYGKAGM---FDQMERVLS-GMLESA---------TCKPD------ 285
T + +++ G KAG+ + E + S G+L + CK
Sbjct: 699 CNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAH 758
Query: 286 --------------VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+ N+++ ++ +D+ E + + + G P+ T+N+++ A
Sbjct: 759 QLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAM 818
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE---QMHAEGMK 388
GK ++M V M + + T TYN +I S + +K +E + + +EG
Sbjct: 819 GKSMRIEEMLRVQAEMHRKGYESTYVTYNTII---SGLVKSKRLEQAIDLYYNLMSEGFS 875
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKL---QIAENVSFYNAVISACIKADDLMEM 445
T+ L++G AG K++ + L +++ N + YN +++ A + +
Sbjct: 876 PTPCTYGPLLDGLLKAG---KMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENV 932
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALEQ 485
+++++M E+ PD ++++++ + G +ND + Q
Sbjct: 933 CQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQ 973
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 7/147 (4%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ +F +K++ P TY L++ LGK+G+ A +++ E++ +G +P Y AL
Sbjct: 1001 EAVCLFNEMKKKGIV-PNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNAL 1059
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ Y + D A+ + + V + LI VD + E L+ +M R
Sbjct: 1060 IRGYSVSGSTDNAYAAYDCVAV------GVSLKTALISGLVDENLINIAEGLFAEMKRRG 1113
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERV 272
P+ T N++L GK+ ++M +V
Sbjct: 1114 CGPDQFTYNLILDAIGKSMRIEEMLKV 1140
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 5/142 (3%)
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
T+ + N ++E G M F+ M + +KA+ TF + +G G ++
Sbjct: 107 TTESCNYMLELMRAHGRVGDMAQVFDLMQKQIVKANVGTFATVFSGVGVQGGLRSAPVAL 166
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
+ + ++ N YN +I +K+ E VYK M E P T+S++ ++ K+
Sbjct: 167 PVMREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKK 226
Query: 475 GMNDKVYALEQEKLQMLLEASG 496
D V L E +EA G
Sbjct: 227 RDVDTVLWLLNE-----MEARG 243
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 36/189 (19%), Positives = 73/189 (38%), Gaps = 2/189 (1%)
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
+ N +L + G+V M + ++ + + TF + G + + M
Sbjct: 110 SCNYMLELMRAHGRVGDMAQVFDLMQKQIVKANVGTFATVFSGVGVQGGLRSAPVALPVM 169
Query: 348 RKLQFPWTSSTYNNVIEAFSDMG-DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
R+ TYN +I G DA+ ME ++ M +G+ +T+ L+ +
Sbjct: 170 REAGMSLNGYTYNGLIYFLVKSGFDAEAME-VYKAMVEDGISPSVRTYSVLMVSFGKKRD 228
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
V+ + + NV Y I +A E ++ +M++ C+PD T ++
Sbjct: 229 VDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTV 288
Query: 467 MTEAYAKEG 475
+ + G
Sbjct: 289 VIQVLCDAG 297
>gi|356503440|ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Glycine max]
Length = 832
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 170/396 (42%), Gaps = 7/396 (1%)
Query: 103 KAKAWVNTVAETFSDHVLKKQWFQALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSGQPE 161
+ K V T + H QW A+ + + ML+ P TY L+ G SG +
Sbjct: 181 RCKPDVETYNAIINAHGRAGQWRWAMNIMDDMLRAA--IPPSRSTYNNLINACGSSGNWK 238
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
A V +M E G+ P + +L+A+ + +A MK + +PD T + +
Sbjct: 239 EALNVCKKMTENGVGPDLVTHNIILSAFKSGAQYSKALSYFELMKG-THIRPDTTTLNIV 297
Query: 222 IKACVDAMRFELIETLYQDMDERS--VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
I V +++ ++ M E+ TP+ VT ++ Y G + E + M+
Sbjct: 298 IHCLVKLRQYDKAIEIFNSMREKKSECTPDVVTFTSIIHLYSVCGQVENCEAAFNMMIAE 357
Query: 280 ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
KP++ + N ++ +A +G + ++ + + G P+ ++ L+ AYG+ + K
Sbjct: 358 GL-KPNIVSYNALIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHK 416
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+ + M++ + +YN +I+A+ G +M EG++ + + C L+
Sbjct: 417 ARQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAIKILREMEQEGIQPNVVSICTLLA 476
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
K+ + + A I N YNA I +C+ + + +YK M++K +
Sbjct: 477 ACGRCSRKVKIDTVLTAAEMRGIKLNTVAYNAAIGSCMNVGEYDKAIGLYKSMRKKKIKT 536
Query: 460 DSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
DS T++++ K + + +E + + L S
Sbjct: 537 DSVTYTVLISGCCKMSKYGEALSFMEEIMHLKLPLS 572
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 158/366 (43%), Gaps = 38/366 (10%)
Query: 122 KQWFQALQVFEMLKEQPF-YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+Q+ +A+++F ++E+ P T+ ++ L GQ E FN M+ EG++P
Sbjct: 305 RQYDKAIEIFNSMREKKSECTPDVVTFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIV 364
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
Y AL+ AY + +EA + N++K +PD+ +Y++L+ A + + ++
Sbjct: 365 SYNALIGAYAARGMDNEAHLFFNEIKQ-NGFRPDIVSYTSLLNAYGRSQKPHKARQIFDR 423
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M + PN V+ N ++ YG G+ ++L M E +P+V ++ T+L+
Sbjct: 424 MKRNKLKPNLVSYNALIDAYGSNGLLADAIKILREM-EQEGIQPNVVSICTLLAACGRCS 482
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+ ++ GI T +N IG+ YDK + + MRK + S TY
Sbjct: 483 RKVKIDTVLTAAEMRGIKLNTVAYNAAIGSCMNVGEYDKAIGLYKSMRKKKIKTDSVTYT 542
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+I CC ++ Y A F + I ++L
Sbjct: 543 VLISG-----------------------------CCKMSKYGEALSFMEEIMHLKLPLSK 573
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
++ Y++ I A K ++E E + MK C PD T++ M +AY +K
Sbjct: 574 EV------YSSAICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAENWEKA 627
Query: 481 YALEQE 486
YAL +E
Sbjct: 628 YALFEE 633
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 88/195 (45%), Gaps = 4/195 (2%)
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
+ D++ M ++ + A + D + + + + P+ T+N +I A+G+ + +
Sbjct: 150 RNDIYNM--MIRLHARHNRTDQARGLFFEMQEWRCKPDVETYNAIINAHGRAGQWRWAMN 207
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+M+ M + P + STYNN+I A G+ K ++M G+ D T +++ +
Sbjct: 208 IMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIILSAFK 267
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK--HCRPD 460
+ + K +S L I + + N VI +K + ++ M+EK C PD
Sbjct: 268 SGAQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNSMREKKSECTPD 327
Query: 461 SETFSIMTEAYAKEG 475
TF+ + Y+ G
Sbjct: 328 VVTFTSIIHLYSVCG 342
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ K + A E++ + + E+Y++ + AY + I EA T N M
Sbjct: 540 TYTVLISGCCKMSKYGEALSFMEEIMHLKLPLSKEVYSSAICAYSKQGQIVEAESTFNLM 599
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
K+ C PDV TY+ ++ A A +E L+++M+ S+ +T+ ++ + K G
Sbjct: 600 KS-SGCYPDVVTYTAMLDAYNAAENWEKAYALFEEMEASSIKLDTIACAALMRSFNKGG- 657
Query: 266 FDQMERVLS 274
Q RVLS
Sbjct: 658 --QPGRVLS 664
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 148/341 (43%), Gaps = 8/341 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L K+ + A + EMV G P YT L+ +C++ D+A
Sbjct: 113 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 172
Query: 202 LNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
Q+ +PDV TYS LI C + E I+ + + S PNTVT N ++ G+
Sbjct: 173 FEQL-VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 231
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ G D+ +L M E+ + PDV T T+++ F ++D + G+ P+
Sbjct: 232 CRMGKMDEAMNLLERMAETGS-SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPD 290
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM-EYTF 379
TF L+ ++ ++ MR+ T TYN +++ + + ++
Sbjct: 291 VVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFML 350
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
E+M + +F +I G + + V A + + +V Y VI +
Sbjct: 351 EEMDC---PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCRE 407
Query: 440 DDLMEMERVYKRM-KEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ E RVY++M +E C P+S T+S + GM D+
Sbjct: 408 KKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDR 448
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 142/329 (43%), Gaps = 4/329 (1%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ L K + E A +MV +G P YTA++ A C + + EA L +M
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
N P+V TY+ LI R + L M ++ V P VT N ++ G KA
Sbjct: 73 AN-RNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAER 130
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+ +L M+ S C PD++T T+++ F + D R +E+ G P+ T++
Sbjct: 131 ASEAYDLLEEMVYSG-CIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYS 189
Query: 326 ILIGAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
LI K+ R+ + + ++ + TYN++I F MG E+M
Sbjct: 190 CLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAE 249
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
G D T+ L+NG+ + ++ + +V + +++ + + L +
Sbjct: 250 TGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSD 309
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ M+ K C P T++ + + Y +
Sbjct: 310 AVHILGEMRRKSCSPTVYTYNTILDGYCR 338
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 9/248 (3%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ +F + + P TY L+ + G+ + A + M E G P YT L
Sbjct: 203 EAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTL 262
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +C+ + +D+A+ LNQM T PDV T+++L+ R + +M +S
Sbjct: 263 MNGFCKLARLDDAYDLLNQM-TRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKS 321
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+P T N +L GY +A +Q+E MLE C P+V + N ++ +
Sbjct: 322 CSPTVYTYNTILDGYCRA---NQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEA 378
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT---SSTYNNV 362
E+ R +P+ + +I +++ D+ V Y + L+ P S TY+ +
Sbjct: 379 MELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRV--YRKMLEEPGCLPNSITYSTL 436
Query: 363 IEAFSDMG 370
+ + G
Sbjct: 437 VTGLCNAG 444
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 9/217 (4%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF-V 200
P T+ L+ L + + A + EM + PT Y +L YCR + ++EA
Sbjct: 289 PDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF 348
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +M +C P+V +++ +I+ R L ++ R P+ V V+ G
Sbjct: 349 MLEEM----DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ D+ RV MLE C P+ T +T+++ N G +D + EK G P
Sbjct: 405 CREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIEK----GCVPN 460
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
T+N+LI A+ K + +++ M + F S
Sbjct: 461 IGTYNLLIDAFRKANRDEDARELLDDMVQRGFGVVQS 497
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 165/385 (42%), Gaps = 12/385 (3%)
Query: 108 VNTVAETFSDHVLKKQWF------QALQVFEMLKEQ--PFYQPKEGTYMKLLVLLGKSGQ 159
+ + FS ++L K +AL++ M+ + P +Y ++ K G
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211
Query: 160 PELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYS 219
+ A ++EM++ GI P Y +++AA C+ +D+A LN M PD TY+
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVK-NGVMPDCMTYN 270
Query: 220 TLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
+++ C E I L + M V P+ VT ++++ K G + ++ M +
Sbjct: 271 SILHGYCSSGQPKEAIGFL-KKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTK 329
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
KP++ T T+L +A KG + M + GI P+ F+ILI AY + D
Sbjct: 330 RGL-KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVD 388
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+ V MR+ + TY VI G + FEQM EG+ + LI
Sbjct: 389 QAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 448
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
+G + + + I N F+N++I + K ++E E++++ M +
Sbjct: 449 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVK 508
Query: 459 PDSETFSIMTEAYAKEGMNDKVYAL 483
P+ T++ + Y G D+ L
Sbjct: 509 PNVITYNTLINGYCLAGKMDEAMKL 533
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 135/326 (41%), Gaps = 7/326 (2%)
Query: 160 PELARKVFNEMVEEGI-EPTPEL--YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
P A +N M G E TP+L Y L+ CR +D F L + + D
Sbjct: 65 PAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIK-KGFRVDAI 123
Query: 217 TYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
++ L+K C D + ++ + + M E PN + NI+L G + +L
Sbjct: 124 AFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHM 183
Query: 276 MLE--SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
M + PDV + T+++ F +G D Y + + GI P+ T+N +I A K
Sbjct: 184 MADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCK 243
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+ DK V+ M K TYN+++ + G K ++M ++G++ D T
Sbjct: 244 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVT 303
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+ L++ G + +K + ++ Y ++ L+EM + M
Sbjct: 304 YSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 363
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDK 479
PD FSI+ AYA +G D+
Sbjct: 364 RNGIHPDHYVFSILICAYANQGKVDQ 389
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 154/366 (42%), Gaps = 47/366 (12%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF-V 200
P TY L+ ++G+ +L ++++G +T LL C + +A +
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMR----FELIETL------------------- 237
L +M L C P+V++Y+ L+K D R EL+ +
Sbjct: 145 VLRRMTEL-GCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVI 203
Query: 238 ---------------YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
Y +M +R + P+ VT N ++ KA D+ VL+ M+++
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV- 262
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
PD T N+IL + + GQ + +K R+ G++P+ T+++L+ K +
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+ + M K +TY +++ ++ G M + M G+ D F LI YA
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382
Query: 403 NAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
N G KV ++ + SK++ + N Y AVI K+ + + +++M ++ P
Sbjct: 383 NQG---KVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439
Query: 460 DSETFS 465
+ ++
Sbjct: 440 GNIVYN 445
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 143/353 (40%), Gaps = 2/353 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L K+G+ ARK+F+ M + G++P Y LL Y + E
Sbjct: 298 EPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG 357
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L+ M PD Y +S LI A + + + ++ M ++ + PN VT V+G
Sbjct: 358 LLDLM-VRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL 416
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K+G + M++ P N+++ + + E + + GI
Sbjct: 417 CKSGRVEDAMLYFEQMIDEGL-SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLN 475
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T FN +I ++ K+ + + E M ++ TYN +I + G
Sbjct: 476 TIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLS 535
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
M + G+K +T T+ LINGY + + ++ ++ YN ++ +
Sbjct: 536 GMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTR 595
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
+ +Y R+ E + + T++I+ K + D + Q M L+
Sbjct: 596 RTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLK 648
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/422 (20%), Positives = 166/422 (39%), Gaps = 84/422 (19%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QA+ VF +++Q P TY ++ +L KSG+ E A F +M++EG+ P +Y +L
Sbjct: 389 QAMLVFSKMRQQGL-NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 447
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C + + A + +M C ++ S + C + E E L++ M
Sbjct: 448 IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE-SEKLFELMVRIG 506
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGM----------------------------- 276
V PN +T N ++ GY AG D+ ++LSGM
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566
Query: 277 -----LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+ES+ PD+ T N IL + + Y + G E T+NI++
Sbjct: 567 VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGL 626
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
K ++ D + + + + + T+N +I+A +G + F + G+ +
Sbjct: 627 CKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNY 686
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
T+ RL +AEN+ I L E+++++
Sbjct: 687 WTY--------------------RL-----MAENI----------IGQGLLEELDQLFLS 711
Query: 452 MKEKHCRPDSETFSIMTEAYAKEG-----------MNDKVYALEQEKLQMLLE--ASGHW 498
M++ C DS + + + G +++K ++LE + ++ + G +
Sbjct: 712 MEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 771
Query: 499 QQ 500
Q+
Sbjct: 772 QE 773
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 140/335 (41%), Gaps = 16/335 (4%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
+ GQ E A +F EM+++GI P YT ++ C+ ++D A QM +PD
Sbjct: 173 REGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMID-RGVKPDN 231
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
TY+ LI + +++ + + ++M + P+ +T ++L K G +
Sbjct: 232 GTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDS 291
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
M KPDV +L +A KG + M + + G+ P R FNI+ AY KK
Sbjct: 292 MFRKGI-KPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKA 350
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
M ++ + MR+ ++ +I+A +G F QM EG+ + F
Sbjct: 351 MIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFS 410
Query: 396 CLINGYANAG-------LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
L+ G G LF +V+ I + F+N ++ +ME +R+
Sbjct: 411 SLVYGLCTVGKWEKAEELFFEVLDQ-------GICVDAVFFNTLMCNLCNEGRVMEAQRL 463
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
M RP+ +++ + + G D+ L
Sbjct: 464 IDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKL 498
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 143/335 (42%), Gaps = 4/335 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P + + K E A +FN+M ++G+ P + AL+ A C+ +D+A +
Sbjct: 334 PNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQ 393
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
NQM P+++ +S+L+ ++E E L+ ++ ++ + + V N ++
Sbjct: 394 FNQMIN-EGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLC 452
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
G + +R++ M+ +P+V + NT+++ G++D + + + G+ P
Sbjct: 453 NEGRVMEAQRLIDLMIRVGV-RPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNE 511
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+ IL+ Y K R D S+ M +TYN ++ G +
Sbjct: 512 FTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLN 571
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSV-RLASKLQIAENVSFYNAVISACIKAD 440
M K D T+ ++NG + RL SK ++V+F N +I A +K
Sbjct: 572 MINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTF-NIMIGALLKGG 630
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ ++ + PD T+ ++ E +EG
Sbjct: 631 RKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEG 665
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 159/392 (40%), Gaps = 46/392 (11%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W + +Q+ E + +P TY LL L K+G+ AR F+ M +GI+P +Y
Sbjct: 246 KWKEVVQMLEEMSTHGL-EPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIY 304
Query: 183 TALL-----------------------------------AAYCRNSLIDEAFVTLNQMKT 207
LL AY + ++I+EA N+M+
Sbjct: 305 AILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQ 364
Query: 208 LPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFD 267
PDV ++ LI A R + + M VTPN + ++ G G ++
Sbjct: 365 -QGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWE 423
Query: 268 QMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
+ E + +L+ C V+ NT++ N+G+V +R + G+ P ++N L
Sbjct: 424 KAEELFFEVLDQGICVDAVF-FNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTL 482
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
+ + D+ + +++ M TY ++ + F +M +G+
Sbjct: 483 VAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGV 542
Query: 388 KADTKTFCCLINGYANAGLFHKV----ISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
T+ +++G G F + ++ + +K I YN +++ K + +
Sbjct: 543 TPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYT----YNIILNGLCKNNFVD 598
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
E ++++R+ K + DS TF+IM A K G
Sbjct: 599 EAFKMFRRLCSKDPQLDSVTFNIMIGALLKGG 630
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 143/345 (41%), Gaps = 37/345 (10%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ + G+ E F +++ G + + LL C +DEA
Sbjct: 88 PNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDI 147
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L + C PDV Y+T+I + E L+ +M ++ + PN VT V+ G
Sbjct: 148 LLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLC 207
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
KA + D+ + V M++ KPD T N ++ + + G+ + + E+ G++P+
Sbjct: 208 KAQVVDRAKGVFQQMIDRGV-KPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDC 266
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+ +L ++Y+ K G + F+
Sbjct: 267 ITYALL----------------LDYLCK-------------------NGRCREARLFFDS 291
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M +G+K D + L++GYA G ++ S + L ++ N +N + A K
Sbjct: 292 MFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAM 351
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALEQ 485
+ E ++ +M+++ PD +F + +A K G ++D V Q
Sbjct: 352 IEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQ 396
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/378 (20%), Positives = 146/378 (38%), Gaps = 43/378 (11%)
Query: 114 TFSDHVLKKQWF-QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE 172
T D + K Q +A VF+ + ++ +P GTY L+ +G+ + ++ EM
Sbjct: 201 TVIDGLCKAQVVDRAKGVFQQMIDRGV-KPDNGTYNCLIHGYLSTGKWKEVVQMLEEMST 259
Query: 173 EGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE 232
G+EP Y LL C+N EA
Sbjct: 260 HGLEPDCITYALLLDYLCKNGRCREA---------------------------------- 285
Query: 233 LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTI 292
+ M + + P+ I+L GY G +M L M+ + P+ N +
Sbjct: 286 --RLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGV-SPNRRIFNIM 342
Query: 293 LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF 352
+A K ++ + K R G+ P+ +F LI A K D +V+++ + +
Sbjct: 343 FCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVD--DAVLQFNQMINE 400
Query: 353 PWTSS--TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
T + +++++ +G + E F ++ +G+ D F L+ N G +
Sbjct: 401 GVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEA 460
Query: 411 ISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
+ L ++ + NV YN +++ + E ++ M +P+ T++I+
Sbjct: 461 QRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRG 520
Query: 471 YAKEGMNDKVYALEQEKL 488
Y K D Y+L +E L
Sbjct: 521 YCKARRVDDAYSLFREML 538
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 142/369 (38%), Gaps = 5/369 (1%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
LQ +M+ E P + L+ L G+ E A ++F E++++GI + L+
Sbjct: 391 VLQFNQMINEG--VTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLM 448
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
C + EA ++ M + +P+V +Y+TL+ R + L M +
Sbjct: 449 CNLCNEGRVMEAQRLIDLMIRV-GVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGL 507
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PN T I+L GY KA D + ML P V T NTIL G+
Sbjct: 508 KPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGV-TPVVATYNTILHGLFQTGRFSEAN 566
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
Y N + T+NI++ K D+ + + S T+N +I A
Sbjct: 567 ELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGAL 626
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G + F + A G+ D T+ + G + K A N
Sbjct: 627 LKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNS 686
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
NA++ + D+ ++ EK+ ++ T S++ Y++ +L E
Sbjct: 687 HMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSRGEYQPHAKSLP-E 745
Query: 487 KLQMLLEAS 495
K + L+EA+
Sbjct: 746 KYRFLIEAN 754
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 97/231 (41%), Gaps = 2/231 (0%)
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD-M 304
V PN T +I++G + + G + G++ + +V ++ +L + +VD
Sbjct: 86 VAPNACTYSILIGCFCRMGRLEHGFAAF-GLILKTGWRVNVIVISQLLKGLCDAKRVDEA 144
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ + FG P+ +N +I + ++ +K ++ M P TY VI+
Sbjct: 145 TDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVID 204
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
+ F+QM G+K D T+ CLI+GY + G + +V+ + S +
Sbjct: 205 GLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEP 264
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ Y ++ K E + M K +PD ++I+ YA +G
Sbjct: 265 DCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKG 315
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 162/369 (43%), Gaps = 8/369 (2%)
Query: 115 FSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG 174
F+ LKK A++V E+L + + P +Y ++ K+ Q + A +VF+ M G
Sbjct: 108 FNSRNLKK----AMRVMEIL--ETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRG 161
Query: 175 IEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELI 234
P Y ++ + C ++ AF ++++ C+P V TY+ LI+A + R
Sbjct: 162 FSPDVVTYNIMIGSLCSRGKLELAFEVMDELLK-DGCKPSVITYTILIEATILEGRINEA 220
Query: 235 ETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILS 294
L+ ++ R + P+ T N ++ G K GM D+ + L + C PDV + N +L
Sbjct: 221 LELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVR-HLSARGCNPDVVSYNILLR 279
Query: 295 VFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 354
F NK + + ER + G +P T +ILI ++ ++ + +V+E M++
Sbjct: 280 SFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTP 339
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
S +Y+ +I AF G E+M ++G D + ++ G +
Sbjct: 340 DSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVF 399
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
++ V YN + SA + ++ + M K PD T++ + ++
Sbjct: 400 EKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRD 459
Query: 475 GMNDKVYAL 483
G+ D+ L
Sbjct: 460 GLVDEAIGL 468
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 101/246 (41%), Gaps = 4/246 (1%)
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
E ++ +MV G EP ++ L++++CR + EA L MK PD Y+Y
Sbjct: 288 EDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKE-KGLTPDSYSYDP 346
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
LI A R +L + M P+ V N +L K G D V L+
Sbjct: 347 LISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEK-LDEV 405
Query: 281 TCKPDVWTMNTILSVFANKG-QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
C P V NT+ S + G ++ +E E R GIDP+ T+N LI + + D+
Sbjct: 406 GCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRK-GIDPDEITYNSLISCLCRDGLVDE 464
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
++ M +F T ++N V+ M +G + ++ LI
Sbjct: 465 AIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIE 524
Query: 400 GYANAG 405
G A AG
Sbjct: 525 GIAYAG 530
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL VFE L E P Y + L G A ++ +EM+ +GI+P Y +L+
Sbjct: 395 ALDVFEKLDEVG-CPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLI 453
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMR-FELIETLYQDMDERS 245
+ CR+ L+DEA L M+ QP V +++ ++ A R FE IE L M E+
Sbjct: 454 SCLCRDGLVDEAIGLLVDMEA-TRFQPTVISFNIVLLGMCKAHRVFEGIELLIT-MVEKG 511
Query: 246 VTPNTVTQNIVLGGYGKAG 264
PN + +++ G AG
Sbjct: 512 CLPNETSYVLLIEGIAYAG 530
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 9/176 (5%)
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA-KHME- 376
P++R+ +I + K ++S E+ R+ FP + ++++ + A KH E
Sbjct: 23 PQSRSDSIPACRFSNKTHLRNVTSSAEF-RQPHFPNLDNRDAHLMKLLNRSCRAGKHNES 81
Query: 377 -YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI--AENVSFYNAVI 433
Y E + ++G K D LI G+ N+ K ++R+ L+ +V YNA+I
Sbjct: 82 LYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKK---AMRVMEILETYGDPDVYSYNAMI 138
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
S KA+ + +V+ RM+ + PD T++IM + G + + + E L+
Sbjct: 139 SGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLK 194
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 156/399 (39%), Gaps = 50/399 (12%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+++FE L ++ + P TY L+ L K+G E AR++ M G P Y+ L+
Sbjct: 100 GMELFEELVKRG-HHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLI 158
Query: 187 AAYCRNSLIDEAFVTLNQM-----KTLPN--------------------CQ--------- 212
C+ IDEA + +M LPN C+
Sbjct: 159 NGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGS 218
Query: 213 ----PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
PD T+STLI + + E DM PN VT N ++ G KA D+
Sbjct: 219 LRVSPDTVTFSTLIDGLCKCGQTD--EACNDDMIAGGYVPNVVTYNALVNGLCKA---DK 273
Query: 269 MERVLSGMLESATCK---PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
MER M+ES K PDV T + ++ F +VD + G P TFN
Sbjct: 274 MERA-HAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFN 332
Query: 326 ILIGAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
+I K R + ++ ++ P T+N +I G+ + FE+M A
Sbjct: 333 SIIDGLCKSDRSGEAFQIALQVYNRMLVP-DKVTFNILIAGACKAGNFEQASALFEEMVA 391
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
+ M+ D TF LI+G AG + L L + NV YN ++ K+ + E
Sbjct: 392 KNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEE 451
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ M C P+S T+ + A + D L
Sbjct: 452 PCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQL 490
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 127/277 (45%), Gaps = 10/277 (3%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y P TY L+ L K+ + E A + MV++G+ P Y+ L+ A+C+ S +DEA
Sbjct: 254 YVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEAL 313
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMR----FELIETLYQDMDERSVTPNTVTQNI 255
L+ M + C P+V T++++I + R F++ +Y R + P+ VT NI
Sbjct: 314 ELLHGMAS-RGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYN----RMLVPDKVTFNI 368
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
++ G KAG F+Q + M+ + +PDV T ++ GQV+ + N
Sbjct: 369 LIAGACKAGNFEQASALFEEMV-AKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL 427
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G+ P T+N+L+ K ++ +E M S TY +++ A
Sbjct: 428 GVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDA 487
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVIS 412
++ + G DT T+ L++G +G + I+
Sbjct: 488 LQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAIT 524
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 157/357 (43%), Gaps = 14/357 (3%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL++F + P TY ++ L KS + ++F E+V+ G P Y L
Sbjct: 63 RALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTL 122
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + C+ ++EA M + C P+V TYS LI R + L Q+M +S
Sbjct: 123 IDSLCKAGDLEEARRLHGGMSS-RGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKS 181
Query: 246 --VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE-SATCKPDVWTMNTILSVFANKGQV 302
V PN +T N L G K M + ++ + + S PD T +T++ GQ
Sbjct: 182 CDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQT 241
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
D E + G P T+N L+ K ++ +++E M TY+ +
Sbjct: 242 D--EACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVL 299
Query: 363 IEAFSDMGDAKHMEYTFEQMH---AEGMKADTKTFCCLINGYANAGLFHKVIS-SVRLAS 418
++AF A ++ E +H + G + TF +I+G + + ++++ +
Sbjct: 300 VDAFC---KASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYN 356
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++ + + V+F N +I+ KA + + +++ M K+ +PD TF + + K G
Sbjct: 357 RMLVPDKVTF-NILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAG 412
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 144/344 (41%), Gaps = 7/344 (2%)
Query: 147 YMKLLVLLGKSGQPELARKVF-NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
Y +L L ++G+ A ++F EM +G+ PT Y ++ C+++ + ++
Sbjct: 48 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ PDV TY+TLI + A E L+ M R PN VT ++++ G K G
Sbjct: 108 VKRGH-HPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGR 166
Query: 266 FDQMERVLSGML-ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRN--FGIDPETR 322
D+ ++ M +S P++ T N+ L + R+ + P+T
Sbjct: 167 IDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTV 226
Query: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
TF+ LI K D+ + + M + TYN ++ + E M
Sbjct: 227 TFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESM 284
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
+G+ D T+ L++ + A + + + + NV +N++I K+D
Sbjct: 285 VDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRS 344
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
E ++ ++ + PD TF+I+ K G ++ AL +E
Sbjct: 345 GEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEE 388
>gi|356508608|ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 879
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 152/337 (45%), Gaps = 8/337 (2%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
N + + DH + A+ F LK QP + TY ++ +LG++ + K+
Sbjct: 354 NQILKQLQDHSV------AVGFFCWLKRQPGFWHDGHTYTTMVGILGRAREFGAINKLLE 407
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
+MV++G +P Y L+ +Y R + + EA NQM+ + C+PD TY TLI A
Sbjct: 408 QMVKDGCQPNVVTYNRLIHSYGRANYLREALNVFNQMQEM-GCEPDRVTYCTLIDIHAKA 466
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
++ ++Y+ M E ++P+T T ++++ GK+G R+ M++ C P++ T
Sbjct: 467 GFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQG-CVPNIVT 525
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
N ++++ A Y +N G P+ T++I++ G ++ +V MR
Sbjct: 526 YNILIALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMR 585
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
+ + Y +++ + G+ + + M G+ + T L++ +
Sbjct: 586 QNHWVPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVPTCNSLLSAFLRVHRLP 645
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
+ ++ L + ++ Y ++S C +A +M
Sbjct: 646 DAYNLLQNMVTLGLNPSLQTYTLLLSCCTEAQSPYDM 682
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 132/325 (40%), Gaps = 9/325 (2%)
Query: 67 LWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWF- 125
W +G + T++ G + + K LE+ K N V H + +
Sbjct: 379 FWHDGH----TYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYL 434
Query: 126 -QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+AL VF ++E +P TY L+ + K+G ++A ++ M E G+ P Y+
Sbjct: 435 REALNVFNQMQEMGC-EPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSV 493
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
++ ++ + A +M C P++ TY+ LI A ++ LY+DM
Sbjct: 494 MINCLGKSGNLSAAHRLFCEMVD-QGCVPNIVTYNILIALQAKARNYQTALELYRDMQNA 552
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
P+ VT +IV+ G G ++ E V M ++ PD ++ ++ G V+
Sbjct: 553 GFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHWV-PDEPVYGLLVDLWGKAGNVEK 611
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
WY G+ P T N L+ A+ + ++++ M L + TY ++
Sbjct: 612 AWEWYHTMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLLS 671
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKA 389
++ M + E M G A
Sbjct: 672 CCTEAQSPYDMGFCCELMAVSGHPA 696
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 96/230 (41%), Gaps = 1/230 (0%)
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
T ++G G+A F + ++L M++ C+P+V T N ++ + + + +
Sbjct: 385 TYTTMVGILGRAREFGAINKLLEQMVKDG-CQPNVVTYNRLIHSYGRANYLREALNVFNQ 443
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
+ G +P+ T+ LI + K D S+ E M+++ + TY+ +I G+
Sbjct: 444 MQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGN 503
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNA 431
F +M +G + T+ LI A A + + R + Y+
Sbjct: 504 LSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNAGFKPDKVTYSI 563
Query: 432 VISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
V+ L E E V+ M++ H PD + ++ + + K G +K +
Sbjct: 564 VMEVLGHCGYLEEAEAVFFEMRQNHWVPDEPVYGLLVDLWGKAGNVEKAW 613
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 93/223 (41%), Gaps = 16/223 (7%)
Query: 283 KPDVW----TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
+P W T T++ + + + + E+ G P T+N LI +YG+
Sbjct: 376 QPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLR 435
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+ +V M+++ TY +I+ + G +E+M G+ DT T+ +I
Sbjct: 436 EALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMI 495
Query: 399 NGYANAGLFHKVISSVRLASKL---QIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
N +G + ++ RL ++ N+ YN +I+ KA + +Y+ M+
Sbjct: 496 NCLGKSG---NLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNA 552
Query: 456 HCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGHW 498
+PD T+SI+ E G ++ A+ E Q HW
Sbjct: 553 GFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQ------NHW 589
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 66/175 (37%), Gaps = 17/175 (9%)
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKL--QFPWTSSTYNNVIEAFSDMGDAKHMEY 377
TR N+ G KR + V+E ++ + Q W +T + + DA
Sbjct: 297 HTRDLNMPAGIVPTKRHFTNSGHVVEVVKDILKQLRWGPATEKTLYNLNFSI-DAYQANQ 355
Query: 378 TFEQMHAE--------------GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
+Q+ G D T+ ++ A F + + K
Sbjct: 356 ILKQLQDHSVAVGFFCWLKRQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQ 415
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
NV YN +I + +A+ L E V+ +M+E C PD T+ + + +AK G D
Sbjct: 416 PNVVTYNRLIHSYGRANYLREALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLD 470
>gi|356526063|ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 1 [Glycine max]
gi|356526065|ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 2 [Glycine max]
Length = 522
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 164/373 (43%), Gaps = 37/373 (9%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY--CRNS---LIDEAFV 200
T+ LL L K Q + +K + + P L+ ALL +Y C +S + D F
Sbjct: 105 THSILLHTLSKHRQFKTTQKFLTQTLSS--HPPHTLFDALLFSYRLCNSSSPLVFDSLFK 162
Query: 201 TLNQMKTLPNC------------QPDVYTYSTLIKACVDAMRFELIETLYQDMDERS-VT 247
TL + P V + + + + + R ++ Y+++ RS V+
Sbjct: 163 TLAHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIRRRSCVS 222
Query: 248 PNTVTQNIVLGGYGKAG----MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
PN T N+++ Y G FD +E+++ L P+V + NT++S + NKG
Sbjct: 223 PNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLS-----PNVVSFNTLISGYCNKGLFG 277
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ + G+ P TFN LI + K+R + + V M+ + TYN ++
Sbjct: 278 LALKVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLL 337
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
+ +GD++ +E+M G+KAD T+ LI G G K VR K +
Sbjct: 338 NGYGQVGDSEMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLV 397
Query: 424 ENVSFYNAVISA-CIKADDLMEMER---VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
N S ++A+I+ C++ + ER +Y+ M C P+ +TF ++ A+ K D
Sbjct: 398 PNASTFSALITGQCVRNNS----ERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDG 453
Query: 480 VYALEQEKLQMLL 492
+ ++ L L+
Sbjct: 454 AVQVLRDMLGRLM 466
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 136/324 (41%), Gaps = 1/324 (0%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A ++ M E G PT + A L++ R D A +++ P+VYT + +I
Sbjct: 173 ATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIRRRSCVSPNVYTLNMII 232
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
+A + + + M + ++PN V+ N ++ GY G+F +V S M+E+
Sbjct: 233 RAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVKSLMVENGV- 291
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
+P+V T NT+++ F + ++ R + + + +DP T+N L+ YG+ +
Sbjct: 292 QPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDSEMGVR 351
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
V E M + TYN +I G K ++ E + + TF LI G
Sbjct: 352 VYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITGQC 411
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
+ R + + N + +ISA K +D +V + M + PD
Sbjct: 412 VRNNSERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLMSPDLS 471
Query: 463 TFSIMTEAYAKEGMNDKVYALEQE 486
T S + + + G N AL E
Sbjct: 472 TMSELCDGLCRCGKNQLALALCSE 495
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 12/196 (6%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
NT+ F +++ +A +VF +K P TY LL G+ G E+ +V+
Sbjct: 299 NTLINGFCK---ERKLHEANRVFNEMKVAN-VDPSVVTYNTLLNGYGQVGDSEMGVRVYE 354
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CV- 226
EM+ G++ Y AL+ C++ +A + ++ N P+ T+S LI CV
Sbjct: 355 EMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDK-ENLVPNASTFSALITGQCVR 413
Query: 227 -DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
++ R LI Y+ M +PN T +++ + K FD +VL ML PD
Sbjct: 414 NNSERAFLI---YRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLM-SPD 469
Query: 286 VWTMNTILSVFANKGQ 301
+ TM+ + G+
Sbjct: 470 LSTMSELCDGLCRCGK 485
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 91/227 (40%), Gaps = 6/227 (2%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL+V ++ E QP T+ L+ K + A +VFNEM ++P+ Y LL
Sbjct: 279 ALKVKSLMVENG-VQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLL 337
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
Y + E V + + + D+ TY+ LI + + +++D+ ++
Sbjct: 338 NGYGQVG-DSEMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENL 396
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PN T + ++ G ++ + M+ S C P+ T ++S F D
Sbjct: 397 VPNASTFSALITGQCVRNNSERAFLIYRSMVRSG-CSPNGQTFQMLISAFCKNEDFDGAV 455
Query: 307 RWYEKFRNFGIDPETRTFNILIGAY---GKKRMYDKMSSVMEYMRKL 350
+ + P+ T + L GK ++ + S ME R L
Sbjct: 456 QVLRDMLGRLMSPDLSTMSELCDGLCRCGKNQLALALCSEMEVRRLL 502
>gi|302829725|ref|XP_002946429.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
gi|300268175|gb|EFJ52356.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
Length = 961
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 158/364 (43%), Gaps = 50/364 (13%)
Query: 136 EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL--------YTALLA 187
+Q Y LL L K G + A ++F+ + +EP+ EL YT +++
Sbjct: 227 KQGLYYLDSSAMAALLKELAKQGYLKRAVEIFDWL--RNLEPSHELSSLCDLYTYTTMIS 284
Query: 188 AYCRNSLIDEAFVTLNQMKTLP-NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+ + A + +M++ +C +V+TYS L+ C+ A +L + +Y+ M E
Sbjct: 285 QCGSHQQLRRALELVAEMRSRGIDC--NVHTYSALMNVCIKANELDLAQDVYKQMLEEGC 342
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
+PN VT NI++ Y K +++ +VL LE + +V T NT++S GQ +
Sbjct: 343 SPNLVTYNILIDVYVKRCQWEEAVKVLD-TLEKQAIQAEVRTYNTVISACNKSGQPEQAL 401
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ YEK G+ P T+ LI AYGKK +K + M + TY+++I A
Sbjct: 402 KVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALEIFRDMIRRGCERNVITYSSLISAC 461
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G + F +MH E K + TF
Sbjct: 462 EKAGRWEMALELFSKMHKENCKPNVVTF-------------------------------- 489
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM-NDKVYALEQ 485
N++I+AC + ++++M+ + C+PDS T+ + AY + G + A EQ
Sbjct: 490 ---NSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQ 546
Query: 486 EKLQ 489
+ Q
Sbjct: 547 MQTQ 550
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 16/146 (10%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ K+G+ E+A ++F++M +E +P + +L+AA ++A QM
Sbjct: 453 TYSSLISACEKAGRWEMALELFSKMHKENCKPNVVTFNSLIAACSHGGHWEKASELFEQM 512
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+T C+PD TY LI A ++ ++ M + P+ A +
Sbjct: 513 QT-QGCKPDSITYCGLITAYERGGQWRRALKAFEQMQTQGCHPD-------------AAV 558
Query: 266 FDQMERVL--SGMLESATCKPDVWTM 289
F+ + VL SG+L + + +WT+
Sbjct: 559 FNSLMEVLWQSGVLLAQSKALQLWTL 584
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 160/375 (42%), Gaps = 2/375 (0%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
N T D + KK + M + P TY L+ K G + A V
Sbjct: 243 NVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIE 302
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
M + + P Y L+ C I+EAF ++M+ L PDV +Y+TLI C++
Sbjct: 303 LMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLK-LLPDVVSYNTLINGCLEW 361
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
+ L ++M E+ V PN VT NI++ Y K G D ++ M ES PD T
Sbjct: 362 SKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGF-SPDCVT 420
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
NT+++ + G + R ++ + ++ T N ++ +++ ++ ++ R
Sbjct: 421 YNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSAR 480
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
K + +Y +I + G+ +++M + + T T+ C+I G G
Sbjct: 481 KRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTE 540
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ IS + + + + + YN ++ + D+ + + + +M E +PD T +I+
Sbjct: 541 QAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILL 600
Query: 469 EAYAKEGMNDKVYAL 483
EG+ +K L
Sbjct: 601 RGLCMEGVLEKALKL 615
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/465 (21%), Positives = 173/465 (37%), Gaps = 79/465 (16%)
Query: 98 LERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKE---GTYMKLLVLL 154
L + +KA ++T +V Q A Q+F+ +K +P T + LV
Sbjct: 128 LRLTSPSKALLDTA---IGAYVQSGQPHHAFQIFKKMKRLRL-RPNLLTCNTLLNSLVRY 183
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
S +R+ FN+ ++ GI P + ++ YC + +A LN M NC PD
Sbjct: 184 PSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKY-NCSPD 242
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
TY+T++ R L DM R + PN T NI++ GY K G + V+
Sbjct: 243 NVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIE 302
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQV-------DMME--------------------- 306
M ++ PDVWT N +++ N+G++ D ME
Sbjct: 303 LMTQNNLL-PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEW 361
Query: 307 -------RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
+ E+ G+ P T NI++ Y K+ D S+ + M + F TY
Sbjct: 362 SKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTY 421
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT-------KTFC----------------- 395
N +I + G+ T ++M + MK D+ +T C
Sbjct: 422 NTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARK 481
Query: 396 -----------CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
LI GY G + + + +I + YN +I + +
Sbjct: 482 RGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQ 541
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ E PD T++ + Y +EG +K + + ++
Sbjct: 542 AISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVE 586
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 145/375 (38%), Gaps = 74/375 (19%)
Query: 123 QWFQALQVFEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+W + + F++L+E + +P T+ ++ K G+ + A +M E G P
Sbjct: 360 EWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCV 419
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE-------- 232
Y L+ YC+ + EAF T+++M N + D T +T+++ + E
Sbjct: 420 TYNTLINGYCKAGNMGEAFRTMDEMGR-KNMKMDSVTLNTILRTLCREKKLEEAYKLLSS 478
Query: 233 ---------------LIETLYQD------------MDERSVTPNTVTQNIVLGGYGKAGM 265
LI ++D M E+ + P+TVT N ++GG + G
Sbjct: 479 ARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGK 538
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+Q L+ +LES PD T NTIL + +G V+ +++ K P+ T N
Sbjct: 539 TEQAISKLNELLESGLL-PDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCN 597
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
IL+ M V+E KL W S +
Sbjct: 598 ILLRGLC-------MEGVLEKALKLFNTWVS----------------------------K 622
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G DT T+ LI G + + + ++ + YNA+I+A + + E
Sbjct: 623 GKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREA 682
Query: 446 ERVYKRMKEKHCRPD 460
E +M EK PD
Sbjct: 683 EEFMSKMLEKGNLPD 697
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A Q + E F +P T LL L G E A K+FN V +G Y L
Sbjct: 576 KAFQFHNKMVENSF-KPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTL 634
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + C+ +D+AF L++M+ PD YTY+ +I A D+ R E M E+
Sbjct: 635 ITSLCKEGRLDDAFNLLSEMEE-KELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKG 693
Query: 246 VTPNTVTQ 253
P+ V Q
Sbjct: 694 NLPDQVLQ 701
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 148/341 (43%), Gaps = 8/341 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L K+ + A + EMV G P YT L+ +C++ D+A
Sbjct: 113 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 172
Query: 202 LNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
Q+ +PDV TYS LI C + E I+ + + S PNTVT N ++ G+
Sbjct: 173 FEQL-VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 231
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ G D+ +L M E+ + PDV T T+++ F ++D + G+ P+
Sbjct: 232 CRMGKMDEAMNLLERMAETGS-SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPD 290
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM-EYTF 379
TF L+ ++ ++ MR+ T TYN +++ + + ++
Sbjct: 291 VVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFML 350
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
E+M + +F +I G + + V A + + +V Y VI +
Sbjct: 351 EEMDC---PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCRE 407
Query: 440 DDLMEMERVYKRM-KEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ E RVY++M +E C P+S T+S + GM D+
Sbjct: 408 KKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDR 448
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 142/329 (43%), Gaps = 4/329 (1%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ L K + E A +MV +G P YTA++ A C + + EA L +M
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
N P+V TY+ LI R + L M ++ V P VT N ++ G KA
Sbjct: 73 AN-RNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAER 130
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+ +L M+ S C PD++T T+++ F + D R +E+ G P+ T++
Sbjct: 131 ASEAYDLLEEMVYSG-CIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYS 189
Query: 326 ILIGAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
LI K+ R+ + + ++ + TYN++I F MG E+M
Sbjct: 190 CLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAE 249
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
G D T+ L+NG+ + ++ + +V + +++ + + L +
Sbjct: 250 TGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSD 309
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ M+ K C P T++ + + Y +
Sbjct: 310 AVHILGEMRRKSCSPTVYTYNTILDGYCR 338
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 109/248 (43%), Gaps = 9/248 (3%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ +F + + P TY L+ + G+ + A + M E G P YT L
Sbjct: 203 EAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTL 262
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +C+ + +D+A+ LNQM T PDV T+++L+ R + +M +S
Sbjct: 263 MNGFCKLARLDDAYDLLNQM-TRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKS 321
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+P T N +L GY +A +Q+E MLE C P+V + N ++ +
Sbjct: 322 CSPTVYTYNTILDGYCRA---NQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEA 378
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT---SSTYNNV 362
E+ R +P+ + +I +++ D+ V Y + L+ P S TY+ +
Sbjct: 379 MELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRV--YRKMLEEPGCLPNSITYSTL 436
Query: 363 IEAFSDMG 370
I + G
Sbjct: 437 ITGLCNAG 444
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 9/217 (4%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF-V 200
P T+ L+ L + + A + EM + PT Y +L YCR + ++EA
Sbjct: 289 PDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF 348
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +M +C P+V +++ +I+ R L ++ R P+ V V+ G
Sbjct: 349 MLEEM----DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ D+ RV MLE C P+ T +T+++ N G +D + EK G P
Sbjct: 405 CREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEK----GCVPN 460
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
T+N+LI A+ K + +++ M + F S
Sbjct: 461 IGTYNLLIDAFRKANRDEDARELLDDMVQRGFGGVQS 497
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 152/337 (45%), Gaps = 11/337 (3%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+ P T+ L+ K G + ARK+ MV +G+ P Y+AL+ C++ EA
Sbjct: 123 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 182
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L +MK PD +TYS LI A + E E + + M TP+ V + ++
Sbjct: 183 EVLEEMKA-SGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHA 241
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG-ID 318
+ K+G + ++ L M + PDV T NT++ G++ + ++ + G +
Sbjct: 242 FCKSGKLLEAQKTLQEMRKQRK-SPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVL 300
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P+ T++ +I K M + +++ M K TY +I+ G + EY
Sbjct: 301 PDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYL 360
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA---ENVSFYNAVISA 435
+ M G + T+ LI+G A KV + R+ +++ A N+ YN +++
Sbjct: 361 LQGMKRAGCAPNVVTYTTLISGLCKA---RKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 417
Query: 436 CIKADDLMEMERVYKRMKE--KHCRPDSETFSIMTEA 470
+ + E +++ +RMK+ C PD+ T+ + A
Sbjct: 418 LCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNA 454
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 157/356 (44%), Gaps = 6/356 (1%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K+ +A+++ E ++E+ P TY L+ L K A+ V +M+E G P
Sbjct: 71 KKLEEAMKLLEEMRERGC-PPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMT 129
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+ +L+ +C+ +D+A L M +P+V TYS LI + +F + + ++M
Sbjct: 130 FNSLVDGFCKRGNVDDARKLLGIM-VAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEM 188
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
VTP+ T + ++ G KA ++ E++L M S C PDV ++I+ F G+
Sbjct: 189 KASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSG-CTPDVVVYSSIIHAFCKSGK 247
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ--FPWTSSTY 359
+ ++ ++ R P+ T+N +I K + +++ M++ P TY
Sbjct: 248 LLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVV-TY 306
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+ VI + ++M G D T+ +I+G G + ++ +
Sbjct: 307 STVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKR 366
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
A NV Y +IS KA + E ERV + M+ C P+ T++ M G
Sbjct: 367 AGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSG 422
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 164/356 (46%), Gaps = 19/356 (5%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL++ E +K F P T+ ++ + +G + A M G +P YTAL+
Sbjct: 9 ALELLEEMKSAGF-APDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALI 64
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
AA+ R ++EA L +M+ C P++ TY+ L+ A + + + M E
Sbjct: 65 AAFARAKKLEEAMKLLEEMRE-RGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGF 123
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PN +T N ++ G+ K G D ++L G++ + +P+V T + ++ + +
Sbjct: 124 APNVMTFNSLVDGFCKRGNVDDARKLL-GIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 182
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS---TYNNVI 363
E+ + G+ P+ T++ LI K DK+ + +R++ + Y+++I
Sbjct: 183 EVLEEMKASGVTPDAFTYSALIHGLCKA---DKIEEAEQMLRRMAGSGCTPDVVVYSSII 239
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ-- 421
AF G + T ++M + D T+ +I+G G K+ + + ++Q
Sbjct: 240 HAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLG---KIAEAQVILDQMQES 296
Query: 422 --IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ +V Y+ VI+ K+D L+E +++ RM + C PD T++ + + K G
Sbjct: 297 GDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCG 352
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 144/315 (45%), Gaps = 5/315 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L KS + A++V EM G+ P Y+AL+ C+ I+EA
Sbjct: 159 RPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQ 218
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L +M C PDV YS++I A C E +TL Q+M ++ +P+ VT N V+ G
Sbjct: 219 MLRRMAG-SGCTPDVVVYSSIIHAFCKSGKLLEAQKTL-QEMRKQRKSPDVVTYNTVIDG 276
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K G + + +L M ES PDV T +T+++ + ++ ++ G +P
Sbjct: 277 LCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNP 336
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ T+ +I K ++ +++ M++ TY +I E
Sbjct: 337 DVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVM 396
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA--SKLQIAENVSFYNAVISACI 437
E+M G + T+ ++NG +G + V+ + + + + + Y +++A +
Sbjct: 397 EEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALM 456
Query: 438 KADDLMEMERVYKRM 452
+D + E E++ ++M
Sbjct: 457 SSDLVQEAEQLLEQM 471
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 138/333 (41%), Gaps = 3/333 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ ++ + E A K+ EM E G P Y L+ A C+ S++ A
Sbjct: 55 PNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDV 114
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ +M P+V T+++L+ + L M + + PN VT + ++ G
Sbjct: 115 VKKMIE-GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLC 173
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K+ F + + VL M S PD +T + ++ +++ E+ + G P+
Sbjct: 174 KSQKFLEAKEVLEEMKASGV-TPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDV 232
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
++ +I A+ K + ++ MRK + TYN VI+ +G + +Q
Sbjct: 233 VVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQ 292
Query: 382 MHAEG-MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
M G + D T+ +ING + + + + K +V Y +I K
Sbjct: 293 MQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCG 352
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
L E E + + MK C P+ T++ + K
Sbjct: 353 RLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCK 385
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 118/286 (41%), Gaps = 5/286 (1%)
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
C + A L +MK+ PD +T++ +I A +A + + M PN
Sbjct: 1 CNAGDLHAALELLEEMKS-AGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPN 56
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
VT ++ + +A ++ ++L M E C P++ T N ++ V +
Sbjct: 57 VVTYTALIAAFARAKKLEEAMKLLEEMRERG-CPPNLVTYNVLVDALCKLSMVGAAQDVV 115
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
+K G P TFN L+ + K+ D ++ M TY+ +I+
Sbjct: 116 KKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKS 175
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFY 429
+ E+M A G+ D T+ LI+G A + +R + +V Y
Sbjct: 176 QKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVY 235
Query: 430 NAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+++I A K+ L+E ++ + M+++ PD T++ + + K G
Sbjct: 236 SSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLG 281
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
++E M+ F + T+ +I A ++ GD ++ + + + G + T+ LI +A
Sbjct: 12 LLEEMKSAGFAPDAFTHTPIITAMANAGD---LDGAMDHLRSMGCDPNVVTYTALIAAFA 68
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
A + + + + N+ YN ++ A K + + V K+M E P+
Sbjct: 69 RAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVM 128
Query: 463 TFSIMTEAYAKEGMNDKVYAL 483
TF+ + + + K G D L
Sbjct: 129 TFNSLVDGFCKRGNVDDARKL 149
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 156/359 (43%), Gaps = 9/359 (2%)
Query: 121 KKQWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
+ + AL V EML+ + P TY LL K + A K+ +EM ++G P
Sbjct: 173 RGRTANALAVLDEMLRRRCV--PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDI 230
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPN--CQPDVYTYSTLIKACVDAMRFELIETL 237
Y ++ C+ +D+A + +K LP+ C+P+ +Y+ ++K A R+E E L
Sbjct: 231 VTYNVVVNGICQEGRVDDA---IEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEEL 287
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
+M ++ PN VT N+++ + G+ + VL + C P+ + N +L F
Sbjct: 288 MGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLE-QIPKYGCSPNSLSYNPLLHAFC 346
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+ ++D + + + G P+ ++N L+ A + D ++ ++
Sbjct: 347 KQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLI 406
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
+YN VI+ + G K +M ++G++ D T+ + G I +
Sbjct: 407 SYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKV 466
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ I N YNA+I K + ++ M C P+ T++I+ E A EG+
Sbjct: 467 QDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 525
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 143/346 (41%), Gaps = 10/346 (2%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P GT L+ L SG+ AR+V P Y A++A YC +D A
Sbjct: 95 RPDAGTCAALIKKLSASGRTAEARRVL-----AACGPDVMAYNAMMAGYCGAGQVDAARR 149
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ + D YT TLI+ R + +M R P+ VT I+L
Sbjct: 150 WCAERAV----ERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEAT 205
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K + Q ++L M + C PD+ T N +++ +G+VD + + ++G +P
Sbjct: 206 CKRSGYKQAMKLLDEMRDKG-CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPN 264
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T ++NI++ ++ +M M + P T+N +I G + E
Sbjct: 265 TVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLE 324
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
Q+ G ++ ++ L++ + K ++ + L ++ YN +++A ++
Sbjct: 325 QIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSG 384
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
++ + ++K+K C P +++ + + K G + L E
Sbjct: 385 EVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNE 430
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 157/355 (44%), Gaps = 3/355 (0%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
K + AL++ E++KE +P E Y L+ L SG+ E A K+ ++M ++ +
Sbjct: 31 KSKLDHALRLLEVMKESG-KKPDEILYNCLVNGLVNSGRLEAAEKILDDMKQDKVSANLV 89
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
YT L+ Y + + +MK P+ +TY+ LI+ F+ LY +
Sbjct: 90 TYTNLIKEYANAGRLQDCRKLFQEMKDKGE-SPNSWTYNALIQGYGRKGLFKEALELYDE 148
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
MD + T NI + YGK G+ + MER+L M ++ PD T NT+L V+A K
Sbjct: 149 MDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEM-DTKGVPPDQVTYNTLLDVYAKKS 207
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+ G P T+NI++ + K++ + + + E ++ TY+
Sbjct: 208 YFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYS 267
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
++ + G +++M G + LI Y + G++ + ++ + K
Sbjct: 268 AMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKS 327
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
I + Y A++ A KA E E +Y M ++ PD T+ I+ A+A G
Sbjct: 328 GIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAG 382
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 142/328 (43%), Gaps = 9/328 (2%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRN-SLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
A +F M+++G E T YT ++ Y R S +D A L MK +PD Y+ L
Sbjct: 1 ACSLFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKE-SGKKPDEILYNCL 59
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
+ V++ R E E + DM + V+ N VT ++ Y AG ++ M +
Sbjct: 60 VNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGE 119
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
P+ WT N ++ + KG Y++ G + T+NI I YGK+ + + M
Sbjct: 120 -SPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDME 178
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+++ M P TYN +++ ++ +M G + + T+ ++
Sbjct: 179 RLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIML--- 235
Query: 402 ANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
++A V + +L L+ + N+ Y+A++S + E +++ M E C
Sbjct: 236 SSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCI 295
Query: 459 PDSETFSIMTEAYAKEGMNDKVYALEQE 486
P +S + E+Y GM + A Q+
Sbjct: 296 PCIIAYSGLIESYGHHGMYQEALACFQD 323
>gi|357509703|ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500155|gb|AES81358.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 855
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 169/370 (45%), Gaps = 9/370 (2%)
Query: 122 KQWFQALQVFEMLKEQPF-YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
KQ+ +A+ +F +KE+ P T+ ++ L G E FN M+ EG++P
Sbjct: 304 KQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIV 363
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
Y ALL AY + +EA N++K +PDV +Y++L+ A + + + +++
Sbjct: 364 SYNALLGAYAARGMENEALQVFNEIKQ-NGFRPDVVSYTSLLNAYGRSRKPQKAREIFKM 422
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
+ ++ PN V+ N ++ YG G+ + +L M E P+V ++ T+L+ G
Sbjct: 423 IKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREM-EQDKIHPNVVSICTLLAACGRCG 481
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
Q ++ GI T +N IG+Y YDK + MRK + S TY
Sbjct: 482 QKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYT 541
Query: 361 NVIEAFSDMGD-AKHMEYTFEQMHAEGMKADTKTFCCLINGYA-NAGLFHKVI---SSVR 415
+I M + + + E MH + + + + +I Y+ A ++I S+
Sbjct: 542 VLISGCCKMSKFGEALSFMEEMMHLK-LPMSKEVYSSIICAYSKQASALGQIIEAESTFN 600
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
L L + +V Y A++ A A+ ++ +++ M+E + D+ + + A+ K G
Sbjct: 601 LMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNKGG 660
Query: 476 MNDKVYALEQ 485
+V +L Q
Sbjct: 661 QPGRVLSLAQ 670
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/399 (20%), Positives = 167/399 (41%), Gaps = 7/399 (1%)
Query: 100 RKAKAKAWVNTVAETFSDHVLKKQWFQALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSG 158
+K + K T + H QW A+ + + ML+ P TY L+ G SG
Sbjct: 177 QKCRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA--IPPSRSTYNNLINACGSSG 234
Query: 159 QPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTY 218
+ A V +M + G+ P + +L A+ + +A +K + +PD T+
Sbjct: 235 NWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKG-THIRPDTTTH 293
Query: 219 STLIKACVDAMRFELIETLYQDMDERS--VTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
+ +I V +++ ++ M E+ P+ VT ++ Y G + E + M
Sbjct: 294 NIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMM 353
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
L KP++ + N +L +A +G + + + + + G P+ ++ L+ AYG+ R
Sbjct: 354 LAEGL-KPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRK 412
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
K + + +++ +YN +I+A+ G + +M + + + + C
Sbjct: 413 PQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICT 472
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
L+ G K+ + + A I N YN+ I + I + + +Y M++K
Sbjct: 473 LLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKK 532
Query: 457 CRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
+ DS T++++ K + + +E + + L S
Sbjct: 533 IKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHLKLPMS 571
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 141/315 (44%), Gaps = 7/315 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+ALQVF +K+ F +P +Y LL G+S +P+ AR++F + ++P Y AL
Sbjct: 380 EALQVFNEIKQNGF-RPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNAL 438
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ AY N L+++A L +M+ P+V + TL+ AC + I+T+ + R
Sbjct: 439 IDAYGSNGLLEDAIEILREMEQ-DKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRG 497
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ NTV N +G Y G +D+ + + M + K D T ++S +
Sbjct: 498 IKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKI-KSDSVTYTVLISGCCKMSKFGEA 556
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKR----MYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ E+ + + ++ +I AY K+ + S M+ L TY
Sbjct: 557 LSFMEEMMHLKLPMSKEVYSSIICAYSKQASALGQIIEAESTFNLMKSLGCSPDVVTYTA 616
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+++A++ + + FE+M +K DT L+ + G +V+S + +
Sbjct: 617 MLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNKGGQPGRVLSLAQSMREKD 676
Query: 422 IAENVSFYNAVISAC 436
I + + + ++SAC
Sbjct: 677 IPLSDTIFFEMVSAC 691
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 87/195 (44%), Gaps = 4/195 (2%)
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
+ D++ M ++ + A + D + + + P+ T+N LI A+G+ + +
Sbjct: 149 RTDIYNM--MIRLHARHNRTDQARGLFFEMQKCRCKPDAETYNALINAHGRAGQWRWAMN 206
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+M+ M + P + STYNN+I A G+ K ++M G+ D T ++ +
Sbjct: 207 IMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFK 266
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK--HCRPD 460
+ + K +S L I + + +N +I +K + ++ MKEK C PD
Sbjct: 267 SGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPD 326
Query: 461 SETFSIMTEAYAKEG 475
TF+ M Y+ G
Sbjct: 327 VVTFTSMIHLYSVCG 341
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 87/173 (50%), Gaps = 11/173 (6%)
Query: 108 VNTVA--ETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARK 165
+NTVA ++ ++ +A+ ++ ++++ + TY L+ K + A
Sbjct: 500 LNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKI-KSDSVTYTVLISGCCKMSKFGEALS 558
Query: 166 VFNEMVEEGIEPTPELYTALLAAYCRNS----LIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
EM+ + + E+Y++++ AY + + I EA T N MK+L C PDV TY+ +
Sbjct: 559 FMEEMMHLKLPMSKEVYSSIICAYSKQASALGQIIEAESTFNLMKSL-GCSPDVVTYTAM 617
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
+ A A ++E + L+++M+E V +T+ ++ + K G Q RVLS
Sbjct: 618 LDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNKGG---QPGRVLS 667
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 157/378 (41%), Gaps = 18/378 (4%)
Query: 129 QVFEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+ F+++KE + + P TY K++ L + + E A +F EM G+ P YT L+
Sbjct: 271 KAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILI 330
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
++C+ LI++A +M+++ C P V TY+ LI A + A + ++ M +
Sbjct: 331 DSFCKAGLIEQAQWLFEEMRSV-GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 389
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERV---LSGMLESA------------TCKPDVWTMNT 291
PN VT ++ G KAG + V L G +SA T P+V T
Sbjct: 390 RPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGA 449
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
++ +VD + + G +P ++ LI + K D V M K
Sbjct: 450 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCG 509
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
+ + TY ++I+ G QM + + T+ +I+G G K +
Sbjct: 510 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL 569
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
+ L + + NV Y A+I KA + ++ +M K C P+ T+ ++
Sbjct: 570 KLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 629
Query: 472 AKEGMNDKVYALEQEKLQ 489
G+ DK L E Q
Sbjct: 630 CAAGLLDKARLLLGEMKQ 647
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 156/375 (41%), Gaps = 35/375 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY LL K Q +++ N M+ EG P P L+ +L+ +YC A+
Sbjct: 140 PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKL 199
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMR------FELIETLYQDMDERSVTPNTVTQNI 255
LN+M T C P Y+ I + + +L E +Y +M + N V +
Sbjct: 200 LNRMTTC-GCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEM----LAANCVLNKV 254
Query: 256 VLGGYGKA----GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
+ + + G FD+ +++ M+ PD T + +++ + +V+ +++
Sbjct: 255 NVANFARCLCGVGKFDKAFQLIKEMMRKGF-VPDTSTYSKVITFLCHATKVEKAFLLFQE 313
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
+ G+ P+ T+ ILI ++ K + ++ + E MR + T TY +I A+
Sbjct: 314 MKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ 373
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISSVRLA------- 417
F +M G + + T+ L++G AG ++ K+I + A
Sbjct: 374 VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFP 433
Query: 418 --SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ +A NV Y A++ KA + + M C P+ + + + + K G
Sbjct: 434 CEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAG 493
Query: 476 MNDKVYALEQEKLQM 490
K+ + ++ LQM
Sbjct: 494 ---KIDSAQEVFLQM 505
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 147/383 (38%), Gaps = 46/383 (12%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y+P + TY L+ +L +GQ +L +V EM E G A C+ +A
Sbjct: 36 YRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADAL 95
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
M + + D + +I ++A F+ + M S PN VT +L G
Sbjct: 96 ----DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSG 151
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ K +R+++ M+ + C P+ N+++ + N+ + + G P
Sbjct: 152 FLKKKQLGWCKRIIN-MMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210
Query: 320 ETRTFNILIGAY-GKKRM----------------------------------------YD 338
+NI IG+ G++++ +D
Sbjct: 211 GYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFD 270
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
K +++ M + F +STY+ VI + F++M G+ D T+ LI
Sbjct: 271 KAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILI 330
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
+ + AGL + + + V Y A+I A +KA + + ++ RM + CR
Sbjct: 331 DSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCR 390
Query: 459 PDSETFSIMTEAYAKEGMNDKVY 481
P+ T+ + + K G K +
Sbjct: 391 PNDVTYGALVDGLCKAGNISKAF 413
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 121/274 (44%), Gaps = 28/274 (10%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y P TY L+ + K G+ +LA KV ++M+++ P YTA++ CR ++A
Sbjct: 510 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL 569
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L+ M+ C P+V TY+ LI A + +L L+ M + +PN VT +++
Sbjct: 570 KLLSLMEE-KGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINH 628
Query: 260 YGKAGMFDQMERVLSGM--------LESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
AG+ D+ +L M L+ C ++ + I S+ G ++ ME
Sbjct: 629 LCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASL----GILEEME----- 679
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK-LQFPWTSST----YNNVIEAF 366
++G P + +LI + K ++ ME ++ ++ P + T Y ++I+A
Sbjct: 680 --SYGTVPIAPVYGMLIDCFSKA---GRLEIAMELHKEMMEVPSSVKTDNDMYASLIQAL 734
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+ + +M G + F CLI G
Sbjct: 735 CLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKG 768
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 153/363 (42%), Gaps = 7/363 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QA+QV + + Y P T L+ K A K+FNEM +G +P Y L
Sbjct: 189 QAMQVLDRQLQSKCY-PDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVL 247
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPN--CQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
+ +C+ +DEA + L K LP+ CQ DV +++ ++++ R+ L M
Sbjct: 248 IKGFCKEGRLDEAIIFL---KKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLR 304
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+ P+ VT NI++ + G+ + VL M+ P+ + N ++ F N+ +D
Sbjct: 305 KGCFPSVVTFNILINFLCQKGLLGKALNVLE-MMPKHGHTPNSRSFNPLIQGFCNRKGID 363
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
E + G P+ T+NIL+ A K D ++ + + +YN VI
Sbjct: 364 RAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVI 423
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
+ +G A+ E+M +G+K D T ++ G + G H+ I I
Sbjct: 424 DGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIK 483
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
N YN+++ KA M C+P +++ + + EG+ ++ L
Sbjct: 484 PNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKL 543
Query: 484 EQE 486
E
Sbjct: 544 SNE 546
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 146/356 (41%), Gaps = 42/356 (11%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPN----- 210
K G+ + A ++ + E G Y L+ AYC++ I+EA L+ PN
Sbjct: 116 KIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEALRVLDHTSVAPNAATYD 175
Query: 211 --------------------------CQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
C PDV T + LI A L+ +M +
Sbjct: 176 AVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGK 235
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ-VD 303
P+ VT N+++ G+ K G D+ L L S C+ DV + N IL + G+ +D
Sbjct: 236 GCKPDVVTYNVLIKGFCKEGRLDEAIIFLK-KLPSYGCQSDVISHNMILRSLCSGGRWMD 294
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
M+ R G P TFNILI +K + K +V+E M K S ++N +I
Sbjct: 295 AMKLLATMLRK-GCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLI 353
Query: 364 EAFSDM-GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ- 421
+ F + G + +E+ E M + G D T+ L+ G KV +V + S+L
Sbjct: 354 QGFCNRKGIDRAIEH-LEIMVSRGCYPDIVTYNILLTALCKDG---KVDDAVVILSQLSS 409
Query: 422 --IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ ++ YN VI +K + + M K +PD T + + ++EG
Sbjct: 410 KGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREG 465
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 136/339 (40%), Gaps = 12/339 (3%)
Query: 151 LVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPN 210
L L ++G+ E + M +G P TAL+ +C+ A + ++
Sbjct: 76 LCRLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEE-SG 134
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
D +Y+ LI A + IE + +D SV PN T + VL G Q
Sbjct: 135 AVIDANSYNVLINAYCKSGE---IEEALRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAM 191
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
+VL L+S C PDV T ++ + V + + + R G P+ T+N+LI
Sbjct: 192 QVLDRQLQS-KCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKG 250
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSS---TYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
+ K+ D+ + +++KL S ++N ++ + G M +G
Sbjct: 251 FCKEGRLDE---AIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGC 307
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
TF LIN GL K ++ + + K N +N +I +
Sbjct: 308 FPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIE 367
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALEQ 485
+ M + C PD T++I+ A K+G ++D V L Q
Sbjct: 368 HLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQ 406
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 156/355 (43%), Gaps = 3/355 (0%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
K + AL++ E++KE +P E Y L+ L SG+ E A K+ ++M + +
Sbjct: 31 KSKLDHALRLLEVMKESG-KKPDEILYNCLVNGLVNSGRLEAAEKILDDMKRDKVSANLV 89
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
YT L+ Y + + +MK P+ +TY+ LI+ F+ LY +
Sbjct: 90 TYTNLIKEYANTGRLQDCRKLFQEMKDKGE-SPNSWTYNALIQGYGRKGLFKEALELYDE 148
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
MD + T NI + YGK G+ + MER+L M ++ PD T NT+L V+A K
Sbjct: 149 MDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEM-DTKGVPPDQVTYNTLLDVYAKKS 207
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+ G P T+NI++ + K++ + + + E ++ TY+
Sbjct: 208 YFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYS 267
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
++ + G +++M G + LI Y + G++ + ++ + K
Sbjct: 268 AMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKS 327
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
I + Y A++ A KA E E +Y M ++ PD T+ I+ A+A G
Sbjct: 328 GIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAG 382
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 140/328 (42%), Gaps = 9/328 (2%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRN-SLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
A +F M+++G E T YT ++ Y R S +D A L MK +PD Y+ L
Sbjct: 1 ACSLFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKE-SGKKPDEILYNCL 59
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
+ V++ R E E + DM V+ N VT ++ Y G ++ M +
Sbjct: 60 VNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGE 119
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
P+ WT N ++ + KG Y++ G + T+NI I YGK+ + + M
Sbjct: 120 -SPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDME 178
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+++ M P TYN +++ ++ +M G + + T+ ++
Sbjct: 179 RLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIML--- 235
Query: 402 ANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
++A V + +L L+ + N+ Y+A++S + E +++ M E C
Sbjct: 236 SSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCI 295
Query: 459 PDSETFSIMTEAYAKEGMNDKVYALEQE 486
P +S + E+Y GM + A Q+
Sbjct: 296 PCIIAYSGLIESYGHHGMYQEALACFQD 323
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 164/430 (38%), Gaps = 78/430 (18%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
++P T+ L++ ++ Q E+A +F +M G Y AL+ +C IDEA
Sbjct: 160 WRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEAL 219
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE-----------------------LI-- 234
+M QPD+YT++ L+K DA R E L+
Sbjct: 220 ELFREMT-----QPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDL 274
Query: 235 ----------ETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
E + +M + + P VT IV+ Y + G RV M C+P
Sbjct: 275 WCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESM-RFKGCEP 333
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
+VWT N I+ F N G+V ++ R G++P+ T+N+LI ++
Sbjct: 334 NVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLL 393
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
M TYN +I+A G F+ + G++ ++ TF +ING A
Sbjct: 394 RLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKA 453
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKA----------DDLMEME-------- 446
G F + + A + Y+ I K D++++ +
Sbjct: 454 GKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNY 513
Query: 447 -----------------RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV--YALEQEK 487
R++ +M + C PD T++ AY EG D+ E +K
Sbjct: 514 TIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKK 573
Query: 488 LQMLLEASGH 497
+ +++A +
Sbjct: 574 CRTIVDAMAY 583
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 161/377 (42%), Gaps = 27/377 (7%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A++VFE ++ + +P TY ++ +G+ A + ++M E G+EP Y L+
Sbjct: 319 AVRVFESMRFKGC-EPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLI 377
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
C + I AF L M+ D YTY+ LI A + + +L+ ++ R +
Sbjct: 378 RGQCIDGHIGSAFRLLRLMEG-NGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGI 436
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL-SVFANKGQVDMM 305
PN+VT N V+ G KAG FD L M+ SA PD +T + + ++ KG + +
Sbjct: 437 RPNSVTFNTVINGLCKAGKFDVACTFLENMI-SAGYAPDTYTYSPFIENLCKTKGSQEGL 495
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ ++ + P T + I+I +R Y + + M TY + A
Sbjct: 496 -FFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRA 554
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL----- 420
+ + G E +M D + LI+G+ + G + ++ ++ + +
Sbjct: 555 YCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPN 614
Query: 421 --------------QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
++AE+V + I+ D+ E+ ++ MK+ + T+
Sbjct: 615 HFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFEL---FELMKKNSVPSSARTYLS 671
Query: 467 MTEAYAKEGMNDKVYAL 483
+ E +++E D+V +L
Sbjct: 672 ILEGFSEERRLDEVTSL 688
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 146/355 (41%), Gaps = 36/355 (10%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDE-- 197
Y P TY + L K+ + +EM+++ ++P+ YT ++ N L +E
Sbjct: 471 YAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVI-----NRLFNERN 525
Query: 198 ---AFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQN 254
A QM + C PDV TY+T ++A + R + E + +M + + + N
Sbjct: 526 YGLATRIWGQMVS-QGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYN 584
Query: 255 IVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL-----------------SVFA 297
++ G+ G D+ +L M A+ P+ +T +L SV+
Sbjct: 585 TLIDGHTSIGQTDRAVTILKHMTGVAS-MPNHFTFFILLRHLLQRRLAEHVPLKATSVWK 643
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
D+ E +E + + RT+ ++ + ++R D+++S++ M++ P
Sbjct: 644 TIELADVFE-LFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNED 702
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
YN ++ F + M G + + L++G G + R +
Sbjct: 703 IYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSS 762
Query: 418 SKLQIAENVSFYNAVISACIK---ADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+ + + +I I+ AD +M + ++MK C+P ET++++TE
Sbjct: 763 RWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMK---CKPSDETYAMLTE 814
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 150/340 (44%), Gaps = 39/340 (11%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
YM+++ L GK Q +LA ++ + M +E E +T L+ Y + L EA N+M+
Sbjct: 1181 YMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGLAAEAVHAFNRME 1240
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
C+PD +S +I + R ++ + + +R P+ V ++ G+ +AG
Sbjct: 1241 DY-GCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDR-FEPDVVVYTSLVHGWCRAGNI 1298
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
+ ERV G ++ A P+V+T + ++ GQ+ + + + G DP TFN
Sbjct: 1299 SEAERVF-GEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNN 1357
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
L+ + K +K+ V M++L P + TYN +IE+ H
Sbjct: 1358 LMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIES-----------------HCRD 1400
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+ K+++SV+ L N S +N + K D+
Sbjct: 1401 DNLEEAV---------------KILNSVKKGCNL----NASSFNPIFGCISKLGDVNSAH 1441
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
R++ +MK+ CRP++ T++I+ +A + D V L +E
Sbjct: 1442 RMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKE 1481
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 124/265 (46%), Gaps = 5/265 (1%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
K++ +A F+ LK++ ++P Y L+ ++G A +VF EM GI P
Sbjct: 1261 KRRAIEAQSFFDSLKDR--FEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVY 1318
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
Y+ ++ A CR+ I A ++M + C P+ T++ L++ V A R E + +Y
Sbjct: 1319 TYSIVIDALCRSGQITRAHDVFSEMIDV-GCDPNAITFNNLMRVHVKAGRTEKVLQVYNQ 1377
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M P+ +T N ++ + + ++ ++L+ + + C + + N I + G
Sbjct: 1378 MKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKKG--CNLNASSFNPIFGCISKLG 1435
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
V+ R + K ++ P T T+NIL+ + K+ D + + + M + + ++TY
Sbjct: 1436 DVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYR 1495
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAE 385
+I F +G + F++M E
Sbjct: 1496 VLISTFCGIGHWNNAYSFFKEMIEE 1520
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 83/208 (39%), Gaps = 33/208 (15%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ + K+G+ E +V+N+M G P Y L+ ++CR+ ++EA
Sbjct: 1350 PNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKI 1409
Query: 202 LNQMKTLPN---------------------------------CQPDVYTYSTLIKACVDA 228
LN +K N C+P+ TY+ L++ D
Sbjct: 1410 LNSVKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADK 1469
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
+++ L ++MDE + PN T +++ + G ++ M+E +P +
Sbjct: 1470 KSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPV 1529
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFG 316
+L GQ+ E EK N G
Sbjct: 1530 YEMVLQQLRKAGQLKKHEELVEKMVNRG 1557
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 76/185 (41%), Gaps = 7/185 (3%)
Query: 308 WYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS 367
W FG PE + +I GK R +D +++ M+ T+ ++ +
Sbjct: 1167 WATNLEEFGHSPEP--YMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYV 1224
Query: 368 DMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL--QIAEN 425
G A + F +M G K D F +I+ + + I + L + +
Sbjct: 1225 KAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKK---RRAIEAQSFFDSLKDRFEPD 1281
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
V Y +++ +A ++ E ERV+ MK P+ T+SI+ +A + G + + +
Sbjct: 1282 VVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFS 1341
Query: 486 EKLQM 490
E + +
Sbjct: 1342 EMIDV 1346
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 168/424 (39%), Gaps = 44/424 (10%)
Query: 108 VNTVAETFSDHVLKKQWF------QALQVFEMLKEQ-PFYQPKEGTYMKLLVLLGKSGQP 160
+ V + FS +L K QA + M+ E P Y ++ K G
Sbjct: 176 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDV 235
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
A +F EMV+ GI P Y++++ A C+ +D+A L QM P+ +TY+
Sbjct: 236 NKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVN-KGVLPNNWTYNN 294
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
LI +++ ++++M S+ P+ VT ++++G K G + V M
Sbjct: 295 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 354
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
P+V++ +L+ +A KG + M ++ GI P+ TFN+LI AY M DK
Sbjct: 355 Q-NPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKA 413
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+ MR TY VI A +G F QM +G+ D + CLI G
Sbjct: 414 MIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQG 473
Query: 401 YANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME-------------- 446
+ G K + + ++ F++++I+ K +M+ +
Sbjct: 474 FCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPT 533
Query: 447 ---------------------RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
RV+ M P+ + + Y K G D+ +L +
Sbjct: 534 AVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFR 593
Query: 486 EKLQ 489
E LQ
Sbjct: 594 EMLQ 597
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 146/347 (42%), Gaps = 4/347 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ ++ +PELA F +++ G+ + LL +C DEA
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDI 168
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS--VTPNTVTQNIVLGG 259
L C PDV++YS L+K+ D + + L + M E +P+ V + V+ G
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDG 228
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ K G ++ + M++ PD T ++++ +D E + + N G+ P
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGI-PPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 287
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
T+N LI Y + + V + MR+ T + ++ + G K F
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 347
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
+ M +G + ++ ++NGYA G + L IA ++ +N +I A
Sbjct: 348 DTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANC 407
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALEQ 485
L + ++ M++ +PD T+ + A + G M+D + Q
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQ 454
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 152/365 (41%), Gaps = 5/365 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
QW +A++VF+ ++ P T L+ L K G+ + AR VF+ M +G P Y
Sbjct: 304 QWKEAVRVFKEMRRHSIL-PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSY 362
Query: 183 TALLAAYC-RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
T +L Y + L+D L + PD+YT++ LIKA + + ++ +M
Sbjct: 363 TIMLNGYATKGCLVD--MTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEM 420
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ V P+ VT V+ + G D + M++ PD + + ++ F G
Sbjct: 421 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV-APDKYAYHCLIQGFCTHGS 479
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ + + N G+ + F+ +I K ++ + + T+ Y+
Sbjct: 480 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSM 539
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+++ + +G + F+ M + G++ + + L+NGY G + +S R +
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 599
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
I + YN +I +A + + + M E + T++I+ K D+
Sbjct: 600 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAI 659
Query: 482 ALEQE 486
L +E
Sbjct: 660 FLFKE 664
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 136/336 (40%), Gaps = 4/336 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ G + A +FNEM + G++P Y ++AA CR +D+A
Sbjct: 392 PDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 451
Query: 202 LNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
NQM PD Y Y LI+ C + E + + M+ + + V + ++
Sbjct: 452 FNQMID-QGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNN-GMHLDIVFFSSIINNL 509
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + + + + P + ++ + G+++ R ++ + GI+P
Sbjct: 510 CKLGRVMDAQNIFD-LTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 568
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+ L+ Y K D+ S+ M + ++ YN +I+ + G + F
Sbjct: 569 DVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFH 628
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M G+ + T+ ++ G F + I + + + N+ N +I+ +
Sbjct: 629 EMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTR 688
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ E + ++ + P T+SIM KEG+
Sbjct: 689 RVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGL 724
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 7/199 (3%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+ L +F EML Q +P Y ++ L ++G+ A+ F+EM E GI Y
Sbjct: 587 EGLSLFREML--QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNI 644
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
+L +N DEA +++ + N + ++ T +T+I R E + L+ +
Sbjct: 645 VLRGLFKNRCFDEAIFLFKELRAM-NVKINIITLNTMIAGMFQTRRVEEAKDLFASISRS 703
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ P VT +I++ K G+ ++ E + S M ++A C+PD +N ++ K ++
Sbjct: 704 GLVPCVVTYSIMITNLIKEGLVEEAEDMFSSM-QNAGCEPDSRLLNHVVRELLKKNEIVR 762
Query: 305 MERWYEKF--RNFGIDPET 321
+ K RNF ++ T
Sbjct: 763 AGAYLSKIDERNFSLEHLT 781
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 145/316 (45%), Gaps = 8/316 (2%)
Query: 166 VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC 225
V+++M+ G P ++ L+ C+ L A +N M C+P++ TY+ LI
Sbjct: 369 VYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDA-KGCKPNLNTYTILIDGF 427
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
+ E + ++M + + NTV N ++ K G + + G + S CKPD
Sbjct: 428 CKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMF-GEMSSKGCKPD 486
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNF---GIDPETRTFNILIGAYGKKRMYDKMSS 342
++T N+++ +VD ME +R+ G+ + TFN LI A+ ++ +
Sbjct: 487 IFTFNSLIFGLC---RVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALK 543
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
++ M P TYN +I+A G + FE+M +G+ T LING+
Sbjct: 544 LVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFC 603
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
AG H + +R + ++ YN++I+ K + E ++++++ + +PDS
Sbjct: 604 TAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSI 663
Query: 463 TFSIMTEAYAKEGMND 478
T++ + +EG D
Sbjct: 664 TYNTLICWLCREGAFD 679
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 152/380 (40%), Gaps = 34/380 (8%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P + T+ ++ L + + A + +M + G P +Y L+ A + +DEA
Sbjct: 208 PNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKL 267
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L +M L C PDV T++T+I R L M + TPN +T ++ G
Sbjct: 268 LEEM-FLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLC 326
Query: 262 KAGMFDQMERVLS--------------------GMLESATC-----------KPDVWTMN 290
K D+ + +LS G L AT PDV+T +
Sbjct: 327 KTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFS 386
Query: 291 TILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
T+++ KG G P T+ ILI + KK ++ ++ M
Sbjct: 387 TLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTK 446
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
F + YN +I A G F +M ++G K D TF LI G
Sbjct: 447 GFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDA 506
Query: 411 ISSVR-LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
++ R + + IA +V+F N +I A ++ ++ E ++ M + C D T++ + +
Sbjct: 507 LALYRDMVLEGVIANSVTF-NTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIK 565
Query: 470 AYAKEGMNDKVYALEQEKLQ 489
A K G +K L +E ++
Sbjct: 566 ALCKTGAVEKGLGLFEEMIR 585
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 127/305 (41%), Gaps = 41/305 (13%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y P T+ L+ L K G A ++ N+M +G +P YT L+ +C+ ++EA
Sbjct: 378 YVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAG 437
Query: 200 VTLNQMKT----------------------------------LPNCQPDVYTYSTLIKAC 225
+ L +M T C+PD++T+++LI
Sbjct: 438 LILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGL 497
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
E LY+DM V N+VT N ++ + + G + ++++ ML C D
Sbjct: 498 CRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRG-CPLD 556
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
T N ++ G V+ +E+ G+ P T NILI + K+ + +E
Sbjct: 557 EITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTA---GKVHNALE 613
Query: 346 YMRKL---QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+MR + F TYN++I G + FE++ AEG++ D+ T+ LI
Sbjct: 614 FMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLC 673
Query: 403 NAGLF 407
G F
Sbjct: 674 REGAF 678
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 89/435 (20%), Positives = 158/435 (36%), Gaps = 71/435 (16%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
++++F+ Q Y Y L+ LG + ++ ++ +M EEGI L+ ++
Sbjct: 87 SMEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIM 146
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
Y R L +A L MK + C+P +Y+ ++ V + ++ DM + V
Sbjct: 147 KYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGV 206
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
+PN T +V+ D +L M + C P+ T++ + + +VD
Sbjct: 207 SPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHG-CVPNSMIYQTLIDALSKRDRVDEAL 265
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY------- 359
+ E+ G P+ TFN +I + + + + +++ M F TY
Sbjct: 266 KLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGL 325
Query: 360 ------------------------NNVIEAFSDMGDAKH-MEYTFEQMHAEGMKADTKTF 394
N ++ F G + +++M G D TF
Sbjct: 326 CKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTF 385
Query: 395 CCLINGYANAGLFHKVISSVR--------------------LASKLQIAE---------- 424
L+NG GLF + V K Q+ E
Sbjct: 386 STLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLT 445
Query: 425 -----NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
N YNA+ISA K + E ++ M K C+PD TF+ + + +
Sbjct: 446 KGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMED 505
Query: 480 VYALEQEKLQMLLEA 494
AL ++ M+LE
Sbjct: 506 ALALYRD---MVLEG 517
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 168/396 (42%), Gaps = 38/396 (9%)
Query: 118 HVLKKQWFQALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIE 176
H ++ +A +VF+ M+K+ P TY L+ L G+ A + EM E+GIE
Sbjct: 242 HCRNRKLDKAFEVFDRMVKDG--CNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIE 299
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
PT YT +++ C +D+A + M C P V TY+ +I A + EL
Sbjct: 300 PTVYTYTVPISSLCDIGRVDDAINLVRSMGK-KGCSPSVQTYTAIISGLFRAGKMELAIG 358
Query: 237 LYQDMDERSVTPNTVTQNIVL------GGYGKA-GMFDQME------------RVLSGM- 276
+Y M + + PNTVT N ++ G +G A +FD ME +++ G+
Sbjct: 359 MYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLF 418
Query: 277 ----LESATC----------KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETR 322
+E A P V T NT++ +G ++ R+ + +P+ R
Sbjct: 419 GMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDER 478
Query: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
T+ LI + K D +S M K TY +I+ + G FE+M
Sbjct: 479 TYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERM 538
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
G A +T+ +I+G + F + ++ + N Y ++I+ K
Sbjct: 539 EENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTAT 598
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+++ M++K+C P++ T++ + +EG D
Sbjct: 599 NLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVD 634
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 143/343 (41%), Gaps = 2/343 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P T+ ++ +L K G+ + A VFN++ + + P YT+L+ +CRN +D+AF
Sbjct: 194 KPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFE 253
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
++M C P+ TYSTLI + R + ++M E+ + P T + +
Sbjct: 254 VFDRM-VKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSL 312
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
G D ++ M + C P V T I+S G++++ Y K G+ P
Sbjct: 313 CDIGRVDDAINLVRSMGKKG-CSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPN 371
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T T+N LI + + + ++M + TYN +I+ M D + F
Sbjct: 372 TVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFN 431
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M +G T+ LI G + + + + + Y +IS K
Sbjct: 432 KMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGG 491
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
L + M + P+ T++ M + Y KEG D +L
Sbjct: 492 KLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSL 534
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 145/345 (42%), Gaps = 12/345 (3%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY ++ L ++G+ ELA ++++M++EG+ P Y AL+ C A
Sbjct: 335 PSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKI 394
Query: 202 LNQMK---TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
+ M+ TL N Q TY+ +IK E ++ M + +P VT N ++
Sbjct: 395 FDWMEGHGTLANAQ----TYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIV 450
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
K G + R L M++ + C+PD T ++S F G++D ++ + GI
Sbjct: 451 ENLKRGYLNNATRFLY-MMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGIS 509
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P T+ +I Y K+ D S+ E M + + TYN +I S E
Sbjct: 510 PNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKF 569
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
+M +G++ +T T+ LING + K N Y ++I +
Sbjct: 570 CAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQ 629
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ ER + E C P +T+S + +EG +++ L
Sbjct: 630 EGKVDAAER----LTENGCEPTIDTYSTLVSGLCREGRSNEASQL 670
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 136/359 (37%), Gaps = 41/359 (11%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
LK+ + F + ++ +P E TY +L+ K G+ + A F EM++ GI P
Sbjct: 453 LKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQ 512
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
YTA++ YC+ ID A +M+ C + TY+ +I RF E
Sbjct: 513 WTYTAMIDGYCKEGKIDVALSLFERMEE-NGCSASIETYNAIISGLSKGNRFSEAEKFCA 571
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
M E+ + PNT+T ++ G K + ++ M E C P+ T +++ +
Sbjct: 572 KMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEM-EKKNCLPNAHTYTSLIYGLCQE 630
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G+VD ER E G +P T TY
Sbjct: 631 GKVDAAERLTEN----GCEP-----------------------------------TIDTY 651
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+ ++ G + E M +G+ + +C L+ + + + L +
Sbjct: 652 STLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAV 711
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
++ Y +I A E +++ + +K D ++++ + +EG +D
Sbjct: 712 KGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSD 770
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 154/401 (38%), Gaps = 61/401 (15%)
Query: 87 KRTPIKNLK-KKLERKAKAKAW-----VNTVAETFSDHVLKK------QWFQALQVFEML 134
K TP NL K L+ + W +N +A T H + K ALQ F +
Sbjct: 35 KTTPFPNLVFKVLDLISTDPHWPKNPELNRLASTLRPHHVSKIINTHINTDTALQFFYWI 94
Query: 135 KEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSL 194
++ FY+ G ++ +L N +V++ I + L+ CRN
Sbjct: 95 SKRHFYKHDMGCFVSML----------------NRLVKDKILAPADHVRILMIKACRNE- 137
Query: 195 IDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQN 254
DE + + + + ++ + TLY + N
Sbjct: 138 -DELKRVTDFLHGISSSDSGLFGF-----------------TLY-------------SFN 166
Query: 255 IVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRN 314
+L GK M + V + + S KP + T NT++++ KG+V + K
Sbjct: 167 TLLLQLGKFDMVTSAQNVYAQIFSSGV-KPSLLTFNTMINILCKKGKVQEAVLVFNKIFQ 225
Query: 315 FGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKH 374
F + P+ T+ LI + + R DK V + M K S TY+ +I + G
Sbjct: 226 FDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGE 285
Query: 375 MEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVIS 434
E+M +G++ T+ I+ + G I+ VR K + +V Y A+IS
Sbjct: 286 AMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIIS 345
Query: 435 ACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+A + +Y +M ++ P++ T++ + EG
Sbjct: 346 GLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEG 386
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 115/260 (44%), Gaps = 11/260 (4%)
Query: 30 NKHRAQVPNFNLIHCSVTSTNKHTSFSSESAVAAKKRLWKEGEYPG-VSETSIPGYRSKR 88
N A + +N I ++ +K FS AK + ++G P ++ TS+ K
Sbjct: 541 NGCSASIETYNAI---ISGLSKGNRFSEAEKFCAK--MTEQGLQPNTITYTSLINGLCKN 595
Query: 89 TPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYM 148
T NL K+ + + K + A T++ + + E L E +P TY
Sbjct: 596 TA-TNLAFKIFHEMEKKNCLPN-AHTYTSLIYGLCQEGKVDAAERLTENG-CEPTIDTYS 652
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
L+ L + G+ A ++ M E+G+ P+ E+Y +LL A+C++ +D A N M +
Sbjct: 653 TLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLM-AV 711
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
QP ++ Y LI A R E ++Q + ++ + + +++ G + G D
Sbjct: 712 KGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDL 771
Query: 269 MERVLSGMLESATCKPDVWT 288
+ L ++ES C P + T
Sbjct: 772 CMKFLY-LMESRNCTPSLHT 790
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 162/368 (44%), Gaps = 3/368 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+ L++F +K P Y L+ L K Q + A ++F+EM+ + P+ Y L
Sbjct: 570 KGLELFNRMKHDRI-SPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTL 628
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ YC++ +++F +MK N +P + T++TL+K A E E + +M ++
Sbjct: 629 IDGYCKDGNPEKSFKVRERMKA-DNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQG 687
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ T +I+ GY D V ++S K + +T + +L+ +GQ++
Sbjct: 688 FVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGL-KMNAYTCSILLNALCKEGQIEKA 746
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E + G+ P +N +I Y +K ++ M K YN +I
Sbjct: 747 EEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRT 806
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
F ++GD ++ E +M +G+ +T+ LI GY F K ++ N
Sbjct: 807 FCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPN 866
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
V Y +I+ K L+E + V + M+++ P+ ++++ + +G + + +
Sbjct: 867 VVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSE 926
Query: 486 EKLQMLLE 493
E + +E
Sbjct: 927 EMFKKGIE 934
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 149/340 (43%), Gaps = 6/340 (1%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL L K GQ E A ++ + +G+ P LY ++ Y R + A + ++ M+
Sbjct: 733 LLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEK-Q 791
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+PD Y+ LI+ + E E M + V+P+ T NI++GGYG+ FD+
Sbjct: 792 GMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 851
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+L M ++ T P+V + T+++ ++ + + G+ P R +N+LI
Sbjct: 852 FDLLKEMEDNGT-MPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLID 910
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
K + E M K TYN +I+ S G E ++ +G+K
Sbjct: 911 GCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKP 970
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
D T+ LI+GY AG + I+ I + Y+ +IS C K +E
Sbjct: 971 DVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEG----IELTK 1026
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
K E +PD ++ + YA G DK + L+++ ++
Sbjct: 1027 KIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIE 1066
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 152/387 (39%), Gaps = 56/387 (14%)
Query: 136 EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI 195
E+ +P Y L+ + G E A + N+M +G+ P+ E Y L+ Y R
Sbjct: 789 EKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEF 848
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI 255
D+ F L +M+ P+V +Y TLI + + + +DM++R V+PN N+
Sbjct: 849 DKCFDLLKEMED-NGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNM 907
Query: 256 VLGGYGKAGMFDQMERV------------------------LSGMLESA----------T 281
++ G G + R ++G L A
Sbjct: 908 LIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKG 967
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK------KR 335
KPDV+T N+++S + G V YE+ + GI P +T+++LI K K+
Sbjct: 968 LKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEGIELTKK 1027
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
++ +MS + + YN V+ ++ GD +QM + + D T+
Sbjct: 1028 IFGEMSLQPDLL----------VYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYN 1077
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
LI G G +V S + ++ Y+ ++ + D M Y+ M+EK
Sbjct: 1078 SLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEK 1137
Query: 456 H-----CRPDSETFSIMTEAYAKEGMN 477
C D + E +KE N
Sbjct: 1138 GLLLDVCIGDELVSGLKEEWRSKEAEN 1164
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 137/355 (38%), Gaps = 21/355 (5%)
Query: 138 PFYQPKE---------------GTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
PF PKE +Y+ L VLL +S A +F + EGI P+ +
Sbjct: 461 PFTSPKELFSAFSLSSPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSL 520
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTL--PNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
T LL + + VT+N + + +P + Y I+A V L+
Sbjct: 521 TLLLDHLVKTK---QFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNR 577
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M ++P N+++ G K E++ ML + P + T NT++ + G
Sbjct: 578 MKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEML-ARRLLPSLITYNTLIDGYCKDG 636
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+ + E+ + I+P TFN L+ K M + +V+ M+ F + T++
Sbjct: 637 NPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFS 696
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+ + +S A +E G+K + T L+N G K +
Sbjct: 697 ILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAK 756
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ N YN +I + DL+ M+++ +PD ++ + + + G
Sbjct: 757 GLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELG 811
>gi|225445222|ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
[Vitis vinifera]
gi|297738818|emb|CBI28063.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 156/348 (44%), Gaps = 9/348 (2%)
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
KL+ +L + G+P+ A+ +FN + EEG PT YT LLAA R +++++
Sbjct: 76 KLMNILIEKGKPQEAQLIFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLISKLEK- 134
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
+PD ++ +I A ++ + +++ M +R P T T N ++ GYG AGM ++
Sbjct: 135 NGLKPDSVFFNAMINAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEE 194
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
++L M + KP+ T N+++ + NK ++ K G+ P+ T+N L
Sbjct: 195 CLKLLDLMSQEENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPDVVTYNTLA 254
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
AY + + ++ M+ + T +I + G K +M G+
Sbjct: 255 RAYAQNGETSRAEGMILEMQNNRVMPNERTCGIIINGYCKEGKMKDALRFLYRMRNYGVH 314
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
+ F LI G+ + V ++ L + + +V ++ +++A + + + +
Sbjct: 315 PNLVIFNSLIKGFLDITDTDGVDEALTLMEEFGVKPDVVTFSTIMNAWSSVGLMDKCQEI 374
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
+ M + PD FSI+ + Y + G E EK + LL A G
Sbjct: 375 FDDMVKAGIEPDIHAFSILAKGYVRAG--------EPEKAESLLTAMG 414
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 177/406 (43%), Gaps = 10/406 (2%)
Query: 85 RSKR-TPIKNLKKKLERKA--KAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQ 141
R KR I +L KLE+ + N + FS+ K+ A+++F +K++ +
Sbjct: 118 RQKRFKSIPSLISKLEKNGLKPDSVFFNAMINAFSESGNVKE---AMKIFRKMKDRG-CK 173
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMV-EEGIEPTPELYTALLAAYCRNSLIDEAFV 200
P T+ L+ G +G PE K+ + M EE ++P + +L+ A+C I EA+
Sbjct: 174 PTTSTFNTLIKGYGNAGMPEECLKLLDLMSQEENVKPNDRTFNSLIRAWCNKKRITEAWN 233
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ +M QPDV TY+TL +A E + +M V PN T I++ GY
Sbjct: 234 VVYKMAA-SGLQPDVVTYNTLARAYAQNGETSRAEGMILEMQNNRVMPNERTCGIIINGY 292
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G R L M P++ N+++ F + D ++ FG+ P+
Sbjct: 293 CKEGKMKDALRFLYRMRNYGV-HPNLVIFNSLIKGFLDITDTDGVDEALTLMEEFGVKPD 351
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
TF+ ++ A+ + DK + + M K ++ + + + G+ + E
Sbjct: 352 VVTFSTIMNAWSSVGLMDKCQEIFDDMVKAGIEPDIHAFSILAKGYVRAGEPEKAESLLT 411
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
M G++ + F +I+G+ +AG ++ I N+ + +I +A
Sbjct: 412 AMGKSGVQPNVVIFTTIISGWCSAGKMEYASRVYEKMCEMGICPNLKTFETLIWGYGEAK 471
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ + E + + M++K P T ++ +A+ G+ ++ ++ +
Sbjct: 472 EPQKAEELLQIMEQKGVAPVKSTIQLVADAWHALGLANEAKRIKND 517
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
++G+PE A + M + G++P ++T +++ +C ++ A +M + C P++
Sbjct: 399 RAGEPEKAESLLTAMGKSGVQPNVVIFTTIISGWCSAGKMEYASRVYEKMCEMGIC-PNL 457
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
T+ TLI +A + E L Q M+++ V P T +V + G+ ++ +R+ +
Sbjct: 458 KTFETLIWGYGEAKEPQKAEELLQIMEQKGVAPVKSTIQLVADAWHALGLANEAKRIKND 517
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
+ E+ P V ++S + + +ER Y+K
Sbjct: 518 VEEA----PKV-----MISTKEDDVAAESLERIYQK 544
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 141/329 (42%), Gaps = 4/329 (1%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
K G + +NEM+++ I P Y +++AA C+ +D+A L M PD
Sbjct: 100 KEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVK-SGVMPDC 158
Query: 216 YTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
TY++++ C E I L + M V P+ VT N ++ K G + ++
Sbjct: 159 MTYNSIVHGFCSSGQPKEAIVFL-KKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFD 217
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
M + KP++ T T+L +A KG + M + GI P F+IL+ AY K+
Sbjct: 218 SMTKRGL-KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQ 276
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
++ V MR+ + TY VI G + FEQM EG+ +
Sbjct: 277 EKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 336
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
LI+G + + + I N F+N++I + K ++E E+++ M
Sbjct: 337 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR 396
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+PD T+S + + Y G D+ L
Sbjct: 397 IGVKPDIITYSTLIDGYCLAGKMDEATKL 425
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 143/327 (43%), Gaps = 39/327 (11%)
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM-KTLPNCQPDVYTYS 219
E AR VF+E++ GI P Y LL C + EA L+ M +C PDV +YS
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
T+I + + Y +M ++ ++PN VT N ++ KA D+ VL+ M++S
Sbjct: 93 TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152
Query: 280 ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
PD T N+I+ F + GQ + +K R+ G++P+ T+N
Sbjct: 153 GV-MPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYN-------------- 197
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
S+M+Y+ K G F+ M G+K + T+ L+
Sbjct: 198 --SLMDYLCK-------------------NGRCTEARKIFDSMTKRGLKPEITTYGTLLQ 236
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
GYA G ++ + L + I N ++ ++ A K + + E V+ +M+++ P
Sbjct: 237 GYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNP 296
Query: 460 DSETFSIMTEAYAKEG-MNDKVYALEQ 485
++ T+ + K G + D + EQ
Sbjct: 297 NAVTYGAVIGILCKSGRVEDAMLYFEQ 323
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 138/329 (41%), Gaps = 2/329 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY ++ SGQP+ A +M +G+EP Y +L+ C+N EA
Sbjct: 156 PDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKI 215
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ M T +P++ TY TL++ + L M + PN +I++ Y
Sbjct: 216 FDSM-TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYA 274
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K ++ V S M + P+ T ++ + G+V+ ++E+ + G+ P
Sbjct: 275 KQEKVEEAMLVFSKMRQQGL-NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 333
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+N LI +++ ++ M + +N++I++ G E F+
Sbjct: 334 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL 393
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G+K D T+ LI+GY AG + + + + + Y+ +I+ K
Sbjct: 394 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISR 453
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEA 470
+ + +++ M+ PD T++I+ +
Sbjct: 454 MKDALVLFREMESSGVSPDIITYNIILQG 482
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 141/353 (39%), Gaps = 2/353 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L K+G+ ARK+F+ M + G++P Y LL Y + E
Sbjct: 190 EPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG 249
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L+ M P+ Y +S L+ A + E ++ M ++ + PN VT V+G
Sbjct: 250 LLDLM-VRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGIL 308
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K+G + M++ P N+++ + + E + + GI
Sbjct: 309 CKSGRVEDAMLYFEQMIDEGL-SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLN 367
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T FN +I ++ K+ + + + M ++ TY+ +I+ + G
Sbjct: 368 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLA 427
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
M + GMK D T+ LINGY + R ++ ++ YN ++ +
Sbjct: 428 SMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTR 487
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
+ +Y + + + + T++I+ K + D + Q M L+
Sbjct: 488 RTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLK 540
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 130/320 (40%), Gaps = 38/320 (11%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ VF +++Q P TY ++ +L KSG+ E A F +M++EG+ P +Y +L
Sbjct: 281 EAMLVFSKMRQQGL-NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 339
Query: 186 LAAYCR--------------------------NSLID----EAFVT----LNQMKTLPNC 211
+ C NS+ID E V L +
Sbjct: 340 IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV 399
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-MFDQME 270
+PD+ TYSTLI A + + L M + P+ VT + ++ GY K M D +
Sbjct: 400 KPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDAL- 458
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
VL +ES+ PD+ T N IL + + Y G E T+NI++
Sbjct: 459 -VLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHG 517
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
K ++ D + + + + + T+N +I+A +G + F + G+ +
Sbjct: 518 LCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 577
Query: 391 TKTFCCLINGYANAGLFHKV 410
T+ + GL ++
Sbjct: 578 YWTYRLMAENIIGQGLLEEL 597
>gi|296083087|emb|CBI22491.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 174/391 (44%), Gaps = 44/391 (11%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A+Q+FE ++ + +P T+ L+ + G G+ KVF ++ P + LL
Sbjct: 123 AVQIFEEMRNEGC-KPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLL 181
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+ + +N + E +MK P+ T++TLI + F+ +Y+ M E V
Sbjct: 182 SVFGQNGMDSEVSGVFKEMKR-AGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGV 240
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM- 305
P+ + N VL + G++ Q E+VL+ M + CKP+ T ++L +AN +++ M
Sbjct: 241 NPDLSSYNAVLAALARGGLWKQSEKVLAEM-KDGRCKPNELTYCSLLHAYANGKEIERMC 299
Query: 306 ----------------------------------ERWYEKFRNFGIDPETRTFNILIGAY 331
ER + + R G P+ T N ++ Y
Sbjct: 300 ALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIY 359
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
G+++M K + +++ M++ F + +TYN+++ +S + + E ++ A+G++ D
Sbjct: 360 GRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDI 419
Query: 392 KTFCCLINGYANAGLFH---KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
++ +I Y G +V+S +R + A ++ YN I++ +E V
Sbjct: 420 ISYNTVIYAYCRNGRMRDASRVLSEMRESGP---APDIITYNTFIASYAADSMFVEAIDV 476
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
M + C+P+ T++ + + Y K D+
Sbjct: 477 VCYMIKHGCKPNQSTYNSIVDWYCKLNRRDE 507
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 104/211 (49%)
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
KPDV+T T+LS F G+ + +E+ RN G P TFN LI +G + + +M
Sbjct: 101 KPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMK 160
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
V E ++ Q T+N ++ F G + F++M G + TF LI+ Y+
Sbjct: 161 VFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYS 220
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
G F + ++ + + + ++S YNAV++A + + E+V MK+ C+P+
Sbjct: 221 RCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNEL 280
Query: 463 TFSIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
T+ + AYA +++ AL +E ++E
Sbjct: 281 TYCSLLHAYANGKEIERMCALAEEIYSGIIE 311
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 4/187 (2%)
Query: 165 KVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
+ F E+ + G P A+++ Y R ++ +A L+ MK P + TY++L+
Sbjct: 335 RAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKR-GGFTPSLTTYNSLMYM 393
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
+ FE E + +++ + + P+ ++ N V+ Y + G RVLS M ES P
Sbjct: 394 YSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGP-AP 452
Query: 285 DVWTMNTILSVFANKGQ-VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
D+ T NT ++ +A V+ ++ ++ G P T+N ++ Y K D+ S
Sbjct: 453 DIITYNTFIASYAADSMFVEAIDVVCYMIKH-GCKPNQSTYNSIVDWYCKLNRRDEASMF 511
Query: 344 MEYMRKL 350
+ +RKL
Sbjct: 512 VNNLRKL 518
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 154/350 (44%), Gaps = 5/350 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ K E A+KV EM E G Y L+ CR I+EAF
Sbjct: 241 PDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGY 300
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+M+ PD +TY +I R + + L +M + PN V + ++ G+
Sbjct: 301 KKEMEDY-GLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFM 359
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G D+ +++ M +A +P+ T + ++ G++ R ++ G +T
Sbjct: 360 RQGNADEAFKIVKEM-SAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADT 418
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+N++I + ++ ++ ++ MRK TY+ +I +G+++ EQ
Sbjct: 419 MTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQ 478
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M A+G+K + + LI+GY G F +++ ++ + ++ YN++I
Sbjct: 479 MIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGK 538
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQML 491
+ E Y M EK +P+ T+ + Y+ G +K EQ QML
Sbjct: 539 MDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKA---EQLLHQML 585
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/457 (22%), Positives = 182/457 (39%), Gaps = 43/457 (9%)
Query: 58 ESAVAAKKRLWKEGEYP-GVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVA-ETF 115
E A KK + G P G + +I KR K L+ + A N V T
Sbjct: 295 EEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTL 354
Query: 116 SDHVLKKQWFQALQVFEMLKEQPF--YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE 173
D +++ A + F+++KE QP + TY L+ L K G+ A ++ +M +
Sbjct: 355 IDGFMRQG--NADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKI 412
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
G Y ++ + R +EAF+ LN+M+ P+VYTYS +I E
Sbjct: 413 GYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRK-GGISPNVYTYSIIINGLCQIGESER 471
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
L + M + PN ++ GY + G F L M PD++ N+++
Sbjct: 472 ASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRE-NLTPDLYCYNSLI 530
Query: 294 SVFANKGQVD--------MMERWYE---------------------------KFRNFGID 318
+N G++D M+E+ ++ + N G++
Sbjct: 531 IGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLN 590
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P + ++ Y K +K+SS ++ M + + Y VI S G +
Sbjct: 591 PNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSV 650
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
+ G+ D+ + LI+G+ A K + + +K I +S YNA+I K
Sbjct: 651 LSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCK 710
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+DD+ ++ + K P+ T++ + + Y K G
Sbjct: 711 SDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAG 747
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 131/320 (40%), Gaps = 7/320 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P Y L++ L G+ + A + ++EM+E+G +P Y L+ Y +++A
Sbjct: 521 PDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQL 580
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L+QM P+ + Y+ +++ + E + + + M E+ + P+ IV+
Sbjct: 581 LHQMLN-SGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLS 639
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+G VLS ++E PD +++S F ++ ++ GI+P
Sbjct: 640 SSGHMQAAVSVLS-VIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGI 698
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+N LI + K ++ + P TY +I+ + GD + + +
Sbjct: 699 SCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNE 758
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKV--ISSVRLASKLQIAENVSFYNAVISACIKA 439
M EG+ D + L G +N+G + I+ +A I +S +N ++ K
Sbjct: 759 MLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAI---ISSFNTLVHGFCKR 815
Query: 440 DDLMEMERVYKRMKEKHCRP 459
L E + M +K P
Sbjct: 816 GKLQETVKFLHVMMDKDIVP 835
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 9/206 (4%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A+ V ++++ P Y L+ K+ E A + +EM ++GIEP Y AL+
Sbjct: 647 AVSVLSVIEKNGLV-PDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALI 705
Query: 187 AAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
+C++ I A N + K LP P+ TY+TLI A LY +M
Sbjct: 706 DGFCKSDDISHARNIFNSIICKGLP---PNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTE 762
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
V P+ +++ G +G Q + M+ A + + NT++ F +G++
Sbjct: 763 GVAPDAFVYSVLAAGCSNSGDLQQALFITEEMI--ARGYAIISSFNTLVHGFCKRGKLQE 820
Query: 305 MERWYEKFRNFGIDPETRTF-NILIG 329
++ + I P T NI+IG
Sbjct: 821 TVKFLHVMMDKDIVPSLLTVENIVIG 846
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 115/304 (37%), Gaps = 29/304 (9%)
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
P P+ + L + C L +A L+QM Y L+ + +
Sbjct: 118 PAPDAFAHLAVSLCAAGLYPQANGLLDQMIR-------AYPTPPLV-----------LSS 159
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAG-MFDQMERVLSGMLESATCKPDVWTMNTILSV 295
+++ + V ++++ Y K G + D E VL +++ P + N +L
Sbjct: 160 VHRALSGSDQGRRPVVLDVLVDTYKKTGRVRDGAEVVL--LMKDLGLAPSLRCCNGLLKD 217
Query: 296 FANKGQVDMMERWYEKFRNF----GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
+ W K R F GI P+ T++ LI AY K R + V+E MR+
Sbjct: 218 LLR--ADALDLLW--KVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETG 273
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
TYN +I G + ++M G+ D T+ +ING G +
Sbjct: 274 CSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAK 333
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
+ S + NV Y+ +I ++ + E ++ K M +P+ T+ +
Sbjct: 334 CLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGL 393
Query: 472 AKEG 475
K G
Sbjct: 394 CKLG 397
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 3/162 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P Y L+ KS AR +FN ++ +G+ P YT L+ YC+ I +A
Sbjct: 695 EPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAID 754
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
N+M T PD + YS L C ++ + + ++M R + + N ++ G+
Sbjct: 755 LYNEMLT-EGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIIS-SFNTLVHGF 812
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
K G + + L M++ P + T+ I+ G++
Sbjct: 813 CKRGKLQETVKFLHVMMDKDIV-PSLLTVENIVIGLGEAGKL 853
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 157/378 (41%), Gaps = 18/378 (4%)
Query: 129 QVFEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+ F+++KE + + P TY K++ L + + E A +F EM G+ P YT L+
Sbjct: 206 KAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILI 265
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
++C+ LI++A +M+++ C P V TY+ LI A + A + ++ M +
Sbjct: 266 DSFCKAGLIEQAQWLFEEMRSV-GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 324
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERV---LSGMLESA------------TCKPDVWTMNT 291
PN VT ++ G KAG + V L G +SA T P+V T
Sbjct: 325 RPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGA 384
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
++ +VD + + G +P ++ LI + K D V M K
Sbjct: 385 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCG 444
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
+ + TY ++I+ G QM + + T+ +I+G G K +
Sbjct: 445 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL 504
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
+ L + + NV Y A+I KA + ++ +M K C P+ T+ ++
Sbjct: 505 KLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 564
Query: 472 AKEGMNDKVYALEQEKLQ 489
G+ DK L E Q
Sbjct: 565 CAAGLLDKARLLLGEMKQ 582
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 156/375 (41%), Gaps = 35/375 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY LL K Q +++ N M+ EG P P L+ +L+ +YC A+
Sbjct: 75 PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKL 134
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMR------FELIETLYQDMDERSVTPNTVTQNI 255
LN+M T C P Y+ I + + +L E +Y +M + N V +
Sbjct: 135 LNRMTTC-GCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEM----LAANCVLNKV 189
Query: 256 VLGGYGKA----GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
+ + + G FD+ +++ M+ PD T + +++ + +V+ +++
Sbjct: 190 NVANFARCLCGVGKFDKAFQLIKEMMRKGF-VPDTSTYSKVITFLCHATKVEKAFLLFQE 248
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
+ G+ P+ T+ ILI ++ K + ++ + E MR + T TY +I A+
Sbjct: 249 MKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ 308
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISSVRLA------- 417
F +M G + + T+ L++G AG ++ K+I + A
Sbjct: 309 VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFP 368
Query: 418 --SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ +A NV Y A++ KA + + M C P+ + + + + K G
Sbjct: 369 CEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAG 428
Query: 476 MNDKVYALEQEKLQM 490
K+ + ++ LQM
Sbjct: 429 ---KIDSAQEVFLQM 440
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 121/274 (44%), Gaps = 28/274 (10%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y P TY L+ + K G+ +LA KV ++M+++ P YTA++ CR ++A
Sbjct: 445 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL 504
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L+ M+ C P+V TY+ LI A + +L L+ M + +PN VT +++
Sbjct: 505 KLLSLMEE-KGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINH 563
Query: 260 YGKAGMFDQMERVLSGM--------LESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
AG+ D+ +L M L+ C ++ + I S+ G ++ ME
Sbjct: 564 LCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASL----GILEEME----- 614
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK-LQFPWTSST----YNNVIEAF 366
++G P + +LI + K ++ ME ++ ++ P + T Y ++I+A
Sbjct: 615 --SYGTVPIAPVYGMLIDCFSKA---GRLEIAMELHKEMMEVPSSVKTDNDMYASLIQAL 669
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+ + +M G + F CLI G
Sbjct: 670 CLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKG 703
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 132/323 (40%), Gaps = 15/323 (4%)
Query: 169 EMVE-EGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
+M+E E + L T +++ S DEA L++M+ +C P+V TY TL+ +
Sbjct: 31 DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRC-NSCIPNVVTYRTLLSGFLK 89
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
+ + + M PN N ++ Y + ++L+ M + C P
Sbjct: 90 KKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRM-TTCGCPPGYV 148
Query: 288 TMNTILSVFANKGQ------VDMMERWYEKF--RNFGIDP-ETRTFNILIGAYGKKRMYD 338
N + + + +D+ E+ Y + N ++ F + GK +D
Sbjct: 149 VYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGK---FD 205
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
K +++ M + F +STY+ VI + F++M G+ D T+ LI
Sbjct: 206 KAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILI 265
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
+ + AGL + + + V Y A+I A +KA + + ++ RM + CR
Sbjct: 266 DSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCR 325
Query: 459 PDSETFSIMTEAYAKEGMNDKVY 481
P+ T+ + + K G K +
Sbjct: 326 PNDVTYGALVDGLCKAGNISKAF 348
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 107/265 (40%), Gaps = 30/265 (11%)
Query: 240 DMDER-SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
DM ER +TV ++ G +A FD+ L M +C P+V T T+LS F
Sbjct: 31 DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRM-RCNSCIPNVVTYRTLLSGFLK 89
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
K Q+ +R G +P FN L+ +Y ++ Y ++ M P
Sbjct: 90 KKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVV 149
Query: 359 YNNVIEAFS--------DMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN---------GY 401
YN I + D+ D E+++ E + A+ C++N
Sbjct: 150 YNIFIGSICGQEKLPSPDLLDLA------EKIYGEMLAAN-----CVLNKVNVANFARCL 198
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
G F K ++ + + S Y+ VI+ A + + +++ MK PD
Sbjct: 199 CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 258
Query: 462 ETFSIMTEAYAKEGMNDKVYALEQE 486
T++I+ +++ K G+ ++ L +E
Sbjct: 259 YTYTILIDSFCKAGLIEQAQWLFEE 283
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 172/377 (45%), Gaps = 17/377 (4%)
Query: 125 FQALQVFEMLKEQPF---------YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
F++L V LK+ P+ + +Y L+ LL KS A +V+ M+ EG
Sbjct: 160 FKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGF 219
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
P+ + Y++L+ + ID L +M+TL +P+VYT++ I+ A +
Sbjct: 220 RPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETL-GLKPNVYTFTICIRVLGRAGKINEAY 278
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
+ + MD+ P+ VT +++ A D + V M ++ KPD T T+L
Sbjct: 279 EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM-KTGRHKPDRVTYITLLDR 337
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
F++ +D +++++ + G P+ TF IL+ A K + + ++ MR
Sbjct: 338 FSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPN 397
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
TYN +I + F M + G+K T+ I+ Y +G +S++
Sbjct: 398 LHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSG---DSVSALE 454
Query: 416 LASKLQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
K++ IA N+ NA + + KA E ++++ +K+ PDS T+++M + Y+
Sbjct: 455 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514
Query: 473 KEGMNDKVYALEQEKLQ 489
K G D+ L E ++
Sbjct: 515 KVGEIDEAIKLLSEMME 531
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 173/396 (43%), Gaps = 41/396 (10%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A ++F +KE +P TY LL LGK+G+ + A ++F MV++G P + L
Sbjct: 556 EAWKMFMRMKEMKL-KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
C+N + A L +M + C PDV+TY+T+I V + + + M ++
Sbjct: 615 FDCLCKNDEVTLALKMLFKMMDM-GCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKL 672
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP-DVWTMNTILSVFANKG---Q 301
V P+ VT +L G KA + + ++++ L + +P +++ + I S+ A G
Sbjct: 673 VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNA 732
Query: 302 VDMMER--------------------------------WYEKF-RNFGIDPETRTFNILI 328
V ER +EKF ++ G+ P+ T+N+LI
Sbjct: 733 VSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLI 792
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
G + M + V ++ +TYN +++A+ G + +++M +
Sbjct: 793 GGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECE 852
Query: 389 ADTKTFCCLINGYANAGLFHKVIS-SVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
A+T T +I+G AG + L S + Y +I K+ L E ++
Sbjct: 853 ANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQ 912
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+++ M + CRP+ ++I+ + K G D AL
Sbjct: 913 LFEGMLDYGCRPNCAIYNILINGFGKAGEADAACAL 948
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 149/328 (45%), Gaps = 9/328 (2%)
Query: 163 ARKVFNEMVEE-GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
AR +F + ++ G++P Y L+ +I+ A Q+K+ C PDV TY+ L
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKS-TGCIPDVATYNFL 826
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
+ A + + + + LY++M NT+T NIV+ G KAG D + ++
Sbjct: 827 LDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRD 886
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
P T ++ + G++ ++ +E ++G P +NILI +GK D
Sbjct: 887 FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAAC 946
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
++ + M K TY+ +++ +G + F+++ G+ D + +ING
Sbjct: 947 ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL 1006
Query: 402 ANAGLFHKVISSVRLASKLQIAENVS----FYNAVISACIKADDLMEMERVYKRMKEKHC 457
+ H++ ++ L ++++ + ++ YN++I A + E ++Y ++
Sbjct: 1007 GKS---HRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGL 1063
Query: 458 RPDSETFSIMTEAYAKEGMNDKVYALEQ 485
P+ TF+ + Y+ G + YA+ Q
Sbjct: 1064 EPNVFTFNALIRGYSLSGKPEHAYAVYQ 1091
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 162/398 (40%), Gaps = 46/398 (11%)
Query: 118 HVLKKQWF--QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
H+L K F +A++V+ + + F +P TY L+V LGK + + EM G+
Sbjct: 196 HLLLKSRFCTEAMEVYRRMILEGF-RPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGL 254
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
+P +T + R I+EA+ L +M C PDV TY+ LI A A + + +
Sbjct: 255 KPNVYTFTICIRVLGRAGKINEAYEILKRMDD-EGCGPDVVTYTVLIDALCTARKLDCAK 313
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
+++ M P+ VT +L + D +++ S M E PDV T ++
Sbjct: 314 EVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEM-EKDGHVPDVVTFTILVDA 372
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
G + R+ GI P T+N LI + D + M L T
Sbjct: 373 LCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPT 432
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA-------------------------- 389
+ TY I+ + GD+ TFE+M +G+
Sbjct: 433 AYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY 492
Query: 390 ---------DTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACI 437
D+ T+ ++ Y+ G ++ +++L S++ +V N++I+
Sbjct: 493 GLKDIGLVPDSVTYNMMMKCYSKVG---EIDEAIKLLSEMMENGCEPDVIVVNSLINTLY 549
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
KAD + E +++ RMKE +P T++ + K G
Sbjct: 550 KADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNG 587
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 142/333 (42%), Gaps = 16/333 (4%)
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
G+ E VF+ M + I+ Y + + + +A L +M+ + Y+
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREF-GFVLNAYS 190
Query: 218 YSTLI------KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
Y+ LI + C +AM +Y+ M P+ T + ++ G GK D +
Sbjct: 191 YNGLIHLLLKSRFCTEAME------VYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMG 244
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+L M E+ KP+V+T + V G+++ ++ + G P+ T+ +LI A
Sbjct: 245 LLKEM-ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL 303
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
R D V E M+ + TY +++ FSD D ++ + +M +G D
Sbjct: 304 CTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDV 363
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
TF L++ AG F + ++ + I N+ YN +I ++ L + ++
Sbjct: 364 VTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGN 423
Query: 452 MKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
M+ +P + T+ + + Y K G D V ALE
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSG--DSVSALE 454
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 158/389 (40%), Gaps = 42/389 (10%)
Query: 129 QVFEMLKEQPFY--QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
V +LKE +P T+ + +LG++G+ A ++ M +EG P YT L+
Sbjct: 241 SVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLI 300
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
A C +D A +MKT + +PD TY TL+ D + ++ + +M++
Sbjct: 301 DALCTARKLDCAKEVFEKMKTGRH-KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH 359
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P+ VT I++ KAG F + L M + P++ T NT++ ++D
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL-PNLHTYNTLICGLLRVHRLDDAL 418
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKK-------RMYDKMSS----------------- 342
+ + G+ P T+ + I YGK ++KM +
Sbjct: 419 ELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSL 478
Query: 343 -----------VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
+ ++ + S TYN +++ +S +G+ +M G + D
Sbjct: 479 AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDV 538
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
LIN A + ++++ V YN +++ K + E +++
Sbjct: 539 IVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 598
Query: 452 MKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
M +K C P++ TF+ + + K ND+V
Sbjct: 599 MVQKGCPPNTITFNTLFDCLCK---NDEV 624
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 135/316 (42%), Gaps = 39/316 (12%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A +FE + QPK TY L+ L ++ E+A+ VF ++ G P Y LL
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL 827
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA--------MRFELI---- 234
AY ++ IDE F +M T C+ + T++ +I V A + ++L+
Sbjct: 828 DAYGKSGKIDELFELYKEMST-HECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRD 886
Query: 235 ------------------------ETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
+ L++ M + PN NI++ G+GKAG D
Sbjct: 887 FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAAC 946
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
+ M++ +PD+ T + ++ G+VD ++++ + G++P+ +N++I
Sbjct: 947 ALFKRMVKEGV-RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIING 1005
Query: 331 YGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
GK R+ + + E TYN++I G + + ++ G++
Sbjct: 1006 LGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP 1065
Query: 390 DTKTFCCLINGYANAG 405
+ TF LI GY+ +G
Sbjct: 1066 NVFTFNALIRGYSLSG 1081
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 105/234 (44%), Gaps = 1/234 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
AL ++ L + P TY L+ L KSG+ A+++F M++ G P +Y L
Sbjct: 873 DALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNIL 932
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + + D A +M +PD+ TYS L+ R + ++++ E
Sbjct: 933 INGFGKAGEADAACALFKRM-VKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+ V N+++ G GK+ ++ + + M S PD++T N+++ G V+
Sbjct: 992 LNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
+ Y + + G++P TFN LI Y + +V + M F + TY
Sbjct: 1052 GKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 134/316 (42%), Gaps = 9/316 (2%)
Query: 164 RKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIK 223
R V N + +G + ++ C+++ + A + QP + TY+ LI
Sbjct: 738 RLVANGICRDG----DSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIG 793
Query: 224 ACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK 283
++A E+ + ++ + P+ T N +L YGK+G D++ + M + C+
Sbjct: 794 GLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM-STHECE 852
Query: 284 PDVWTMNTILSVFANKGQV-DMMERWYEKFRNFGIDPETRTFNILIGAYGKK-RMYDKMS 341
+ T N ++S G V D ++ +Y+ + P T+ LI K R+Y+
Sbjct: 853 ANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEA-K 911
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+ E M + YN +I F G+A F++M EG++ D KT+ L++
Sbjct: 912 QLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 971
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK-EKHCRPD 460
G + + + + + +V YN +I+ K+ L E ++ MK + PD
Sbjct: 972 CMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPD 1031
Query: 461 SETFSIMTEAYAKEGM 476
T++ + GM
Sbjct: 1032 LYTYNSLILNLGIAGM 1047
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 153/390 (39%), Gaps = 9/390 (2%)
Query: 95 KKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLL 154
K K R + T+ + FSD+ + +++ F E+ + P T+ L+ L
Sbjct: 318 KMKTGRHKPDRVTYITLLDRFSDN----RDLDSVKQFWSEMEKDGHVPDVVTFTILVDAL 373
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
K+G A + M ++GI P Y L+ R +D+A M++L +P
Sbjct: 374 CKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESL-GVKPT 432
Query: 215 VYTYSTLIK-ACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
YTY I +ET ++ M + + PN V N L KAG + +++
Sbjct: 433 AYTYIVFIDYYGKSGDSVSALET-FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF 491
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
G L+ PD T N ++ ++ G++D + + G +P+ N LI K
Sbjct: 492 YG-LKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYK 550
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
D+ + M++++ T TYN ++ G + FE M +G +T T
Sbjct: 551 ADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTIT 610
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
F L + + + + +V YN +I +K + E + +MK
Sbjct: 611 FNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK 670
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
K PD T + K + + Y +
Sbjct: 671 -KLVYPDFVTLCTLLPGVVKASLIEDAYKI 699
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 147/375 (39%), Gaps = 50/375 (13%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY ++ L K+GQ + A F++M ++ + P LL + SLI++A+
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKI 699
Query: 202 LNQMKTLPNC--QPDVYTYSTLIKA----------------------CVDA-------MR 230
+ L NC QP + LI + C D +R
Sbjct: 700 ITNF--LYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIR 757
Query: 231 FE-----------LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
+ L E +D+ V P T N+++GG +A M + + V ++S
Sbjct: 758 YSCKHNNVSGARTLFEKFTKDL---GVQPKLPTYNLLIGGLLEADMIEIAQDVFL-QVKS 813
Query: 280 ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI-GAYGKKRMYD 338
C PDV T N +L + G++D + Y++ + T T NI+I G + D
Sbjct: 814 TGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDD 873
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+ + M F T+ TY +I+ S G + FE M G + + + LI
Sbjct: 874 ALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILI 933
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
NG+ AG + + K + ++ Y+ ++ + E +K +KE
Sbjct: 934 NGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLN 993
Query: 459 PDSETFSIMTEAYAK 473
PD ++++ K
Sbjct: 994 PDVVCYNLIINGLGK 1008
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%)
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
L T+ T N ++EA G + M Y F+ M +K DT T+ + + G +
Sbjct: 112 LNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQ 171
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
++R + N YN +I +K+ E VY+RM + RP +T+S +
Sbjct: 172 APYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMV 231
Query: 470 AYAKEGMNDKVYALEQE 486
K D V L +E
Sbjct: 232 GLGKRRDIDSVMGLLKE 248
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F +K P TY L++ LG +G E A K++NE+ G+EP + AL
Sbjct: 1014 EALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNAL 1073
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
+ Y + + A+ M T P+ TY L
Sbjct: 1074 IRGYSLSGKPEHAYAVYQTMVT-GGFSPNTGTYEQL 1108
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 42/234 (17%), Positives = 84/234 (35%), Gaps = 36/234 (15%)
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR-NFGIDPETRTFNILIGAY 331
SG + + KPD+ + + + D +++ N + T T N ++ A
Sbjct: 69 FSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEAL 128
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH-------- 383
++M+ V + M+K ++TY + ++ S G K Y +M
Sbjct: 129 RVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNA 188
Query: 384 ---------------------------AEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
EG + +T+ L+ G V+ ++
Sbjct: 189 YSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKE 248
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
L + NV + I +A + E + KRM ++ C PD T++++ +A
Sbjct: 249 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDA 302
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 162/350 (46%), Gaps = 4/350 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P E Y +++LL K+G+ A ++ M + G+ P +YT +++ +C+ + A
Sbjct: 309 KPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACK 368
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
++M+ PD+ TY+++I + + ++ +M + + P+ VT ++ GY
Sbjct: 369 LFDEMRR-KKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGY 427
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
KAG + V + M++ P+V T + G++D+ + G+ P
Sbjct: 428 CKAGEMKEAFSVHNQMVQKGL-TPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPN 486
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+N ++ K ++ +ME M F + TY +++A+ MG+
Sbjct: 487 VYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLR 546
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA-CIKA 439
M + ++ TF L+NG+ +G+ + + I N + +N+++ CIK
Sbjct: 547 IMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIK- 605
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+++ +YK M ++ PDS T++I+ + + K + + L +E ++
Sbjct: 606 NNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVE 655
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 122/261 (46%), Gaps = 2/261 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P E TY L+ K+G+ + A V N+MV++G+ P YTAL C+N ID A
Sbjct: 414 EPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANE 473
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L++M + QP+VYTY+T++ E L ++MD P+T+T ++ Y
Sbjct: 474 LLHEM-SRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAY 532
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + +L ML + +P + T N +++ F G ++ ER E GI P
Sbjct: 533 CKMGEMAKAHELLRIML-NKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPN 591
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
TFN L+ Y K + + + M S+TYN +I+ + K + +
Sbjct: 592 ATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHK 651
Query: 381 QMHAEGMKADTKTFCCLINGY 401
+M +G T+ LI G+
Sbjct: 652 EMVEKGYSVTAATYDALIRGF 672
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 105/250 (42%), Gaps = 1/250 (0%)
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
L M +R P+ V+ +V+ GY + G D++ +++ L+ KPD + N I+ +
Sbjct: 264 LLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDE-LKGKGLKPDEYIYNNIILLL 322
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
G+V E+ R +G+ P+ + +I + K + + MR+ +
Sbjct: 323 CKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDI 382
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
TY +VI G F +M +G++ D T+ LI+GY AG + S
Sbjct: 383 VTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQ 442
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ + NV Y A+ K ++ + M K +P+ T++ + K G
Sbjct: 443 MVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGN 502
Query: 477 NDKVYALEQE 486
++ L +E
Sbjct: 503 IEQTVKLMEE 512
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 91/208 (43%), Gaps = 13/208 (6%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
Q +++ E + FY P TY L+ K G+ A ++ M+ + ++PT + L
Sbjct: 505 QTVKLMEEMDLAGFY-PDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVL 563
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +C + ++++ + M P+ T+++L+K +Y+ M +R
Sbjct: 564 MNGFCMSGMLEDGERLIEWMLE-KGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRG 622
Query: 246 VTPNTVTQNIVLGGYGKA-----GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
V P++ T NI++ G+ KA F E V G +A T + ++ F +
Sbjct: 623 VMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAA------TYDALIRGFYKRK 676
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILI 328
+ + +E+ R G+ E ++I +
Sbjct: 677 KFVEARKLFEEMRKHGLVAEKDIYDIFV 704
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 143/348 (41%), Gaps = 13/348 (3%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P + TY L+ + G + A KV M G EP Y L C+ +DEAF
Sbjct: 276 PTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRL 335
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACV------DAMRFELIETLYQDMDERSVTPNTVTQNI 255
++M+ L PDV TY+TL+ AC DA+R L ++M ++ V P VT NI
Sbjct: 336 KDEMERLSTALPDVVTYNTLVDACFKWRCSSDALR------LLEEMRDKGVKPTLVTHNI 389
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
V+ K G ++ L + E PDV T NT++ + G V ++
Sbjct: 390 VVKSLCKEGKLEEALGKLEKIAEEGLA-PDVITYNTLIDAYCKAGNVAKAFTLMDEMVGK 448
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G+ +T T N ++ K + Y+ ++ + F +Y V+ A+ + +
Sbjct: 449 GLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPA 508
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
++QM + T+ LI G + I + + + + + YN +I A
Sbjct: 509 LRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHA 568
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
K DL R + +M E +PD T + + G DK L
Sbjct: 569 YCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKL 616
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 160/385 (41%), Gaps = 39/385 (10%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+L VF L E + P T+ L+ G A + M G+ P Y LL
Sbjct: 192 SLDVFRSLIELRLH-PNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLL 250
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
A+CR ++ EA L +MK P TY+TL+ A + + + M
Sbjct: 251 NAHCRKGMLGEARALLARMKR-DGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGF 309
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL-SVFANKGQVDMM 305
P+ T N++ G +AG D+ R+ M +T PDV T NT++ + F + D +
Sbjct: 310 EPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDAL 369
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
R E+ R+ G+ P T NI++ + K+ ++ +E + + TYN +I+A
Sbjct: 370 -RLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDA 428
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTF------CCLINGYANA----------GLFHK 409
+ G+ ++M +G+K DT T C + Y +A G
Sbjct: 429 YCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPD 488
Query: 410 VIS----------------SVRLASKL---QIAENVSFYNAVISACIKADDLMEMERVYK 450
+S ++RL ++ ++ ++S YN +I + + L E
Sbjct: 489 EVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLN 548
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEG 475
+ EK PD T++I+ AY KEG
Sbjct: 549 ELVEKGLVPDETTYNIIIHAYCKEG 573
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 107/237 (45%), Gaps = 8/237 (3%)
Query: 244 RSVTPNTVTQNIVLGGYGKA-GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
R V P+ N VL ++ Q + L P+ +T N ++ +KG +
Sbjct: 165 RGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTL 224
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ FG+ P+ T+N L+ A+ +K M + +++ M++ T TYN +
Sbjct: 225 ADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTL 284
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ- 421
+ AF+ +G K E M A G + D +T+ L G AG KV + RL +++
Sbjct: 285 VSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAG---KVDEAFRLKDEMER 341
Query: 422 ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+V YN ++ AC K + R+ + M++K +P T +I+ ++ KEG
Sbjct: 342 LSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEG 398
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 158/371 (42%), Gaps = 55/371 (14%)
Query: 94 LKKKLERKAKAKAWVNTVAETFSDHVLK-KQWFQALQVFEMLKEQPFYQPKEGTYMKLLV 152
LK ++ER + A V T T D K + AL++ E ++++ +P T+ ++
Sbjct: 335 LKDEMERLSTALPDVVTY-NTLVDACFKWRCSSDALRLLEEMRDKGV-KPTLVTHNIVVK 392
Query: 153 LLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQ 212
L K G+ E A ++ EEG+ P Y L+ AYC+ + +AF +++M +
Sbjct: 393 SLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVG-KGLK 451
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
D +T +T++ R+E E L +R P+ V+ V+ Y K + R+
Sbjct: 452 MDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRL 511
Query: 273 LSGMLESATCKPDVWTMNTILSVFAN----KGQVDMMERWYEKFRNFGIDPETRTFNILI 328
M+E P + T NT++ K +D + EK G+ P+ T+NI+I
Sbjct: 512 WDQMIERKLI-PSISTYNTLIKGLCRMERLKEAIDKLNELVEK----GLVPDETTYNIII 566
Query: 329 GAYGKK-------RMYDKM---------------------SSVMEYMRKLQFPWTSS--- 357
AY K+ R ++KM ++ KL W
Sbjct: 567 HAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKK 626
Query: 358 ----TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-------L 406
TYN +I++ +GD + F+ M +G++ D T+ +++ + AG +
Sbjct: 627 VDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNM 686
Query: 407 FHKVISSVRLA 417
HK+ S +L+
Sbjct: 687 LHKLADSGKLS 697
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 124/307 (40%), Gaps = 40/307 (13%)
Query: 132 EMLKEQP--FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
E+L P + P E +Y ++ K PE A +++++M+E + P+ Y L+
Sbjct: 475 ELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGL 534
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
CR + EA LN++ PD TY+ +I A E + M E S P+
Sbjct: 535 CRMERLKEAIDKLNELVE-KGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPD 593
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
VT N ++ G G D+ ++ +E K DV T NT++ G VD ++
Sbjct: 594 VVTCNTLMNGLCLHGKLDKALKLFESWVEKGK-KVDVITYNTLIQSMCKVGDVDTALHFF 652
Query: 310 EKFRNFGIDPETRTFNILIGAYGK-------KRMYDKM---------------------- 340
+ G+ P+ T+N+++ A + M K+
Sbjct: 653 DDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADE 712
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDM-------GDAKHMEYTFEQMHAEGMKADTKT 393
+ V E+ K + + +N +E + + G K + ++M +GM D+ T
Sbjct: 713 ADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSST 772
Query: 394 FCCLING 400
+ L+ G
Sbjct: 773 YITLMEG 779
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 131/334 (39%), Gaps = 43/334 (12%)
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMK------------------------TLPNCQ 212
PT L A L+AY R L A L+ ++ TLP
Sbjct: 133 PTSPLADAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQAS 192
Query: 213 PDV-------------YTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
DV YT++ L+ C + + TL M ++P+ VT N +L
Sbjct: 193 LDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATL-STMQGFGLSPDAVTYNTLLN 251
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
+ + GM + +L+ M P T NT++S FA G + + E +G +
Sbjct: 252 AHCRKGMLGEARALLARMKRDGIA-PTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFE 310
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS-STYNNVIEAFSDMGDAKHMEY 377
P+ RT+N+L + D+ + + M +L TYN +++A +
Sbjct: 311 PDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALR 370
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
E+M +G+K T ++ G + + + ++ +A +V YN +I A
Sbjct: 371 LLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYC 430
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
KA ++ + + M K + D TF++ T Y
Sbjct: 431 KAGNVAKAFTLMDEMVGKGLKMD--TFTLNTVLY 462
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/176 (19%), Positives = 70/176 (39%), Gaps = 2/176 (1%)
Query: 313 RNFGIDPETRTFNILIGAYGKKRMYDKMSS--VMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
R G+ P + N ++ A + +S V + +L+ T+N ++ G
Sbjct: 163 RRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKG 222
Query: 371 DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYN 430
T M G+ D T+ L+N + G+ + + + + IA YN
Sbjct: 223 TLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYN 282
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
++SA + + + +V + M PD T++++ + G D+ + L+ E
Sbjct: 283 TLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDE 338
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 177/437 (40%), Gaps = 30/437 (6%)
Query: 73 YPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQ------ 126
+ GVS+ GY+ + L K L + K K A F D VL Q F+
Sbjct: 113 FSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKE-----ALRFHDKVLA-QGFRLSGISY 166
Query: 127 ---------------ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMV 171
A+++ + E+ +P Y ++ L K + A ++ EMV
Sbjct: 167 GILINGVCKIGETRAAIRLLRRI-ERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMV 225
Query: 172 EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRF 231
+GI P Y+ L++ +C ++ A LN+M L N PD+YTY+ L+ A +
Sbjct: 226 GKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEM-VLENINPDIYTYTILVDALCKEGKV 284
Query: 232 ELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNT 291
+ E + M + V + V + ++ GY + +RV M + PDV +
Sbjct: 285 KEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGV-TPDVHCYSI 343
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
+++ +VD +E+ + P+T T+ LI K + + + M
Sbjct: 344 MINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRG 403
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
P TYNN+I+A G F +M + ++ + TF L++G G +
Sbjct: 404 QPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNAL 463
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
+ NV Y +I+ K L E + RM++ C D+ TF IM A+
Sbjct: 464 EFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAF 523
Query: 472 AKEGMNDKVYALEQEKL 488
+ NDK L +E +
Sbjct: 524 FDKDENDKAEKLVREMI 540
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 116/268 (43%), Gaps = 17/268 (6%)
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
P + ++ ++ + V+ R+ +LY+ M+ V P+ T NI++ + F Q+
Sbjct: 56 PHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCH---FGQVVLA 112
Query: 273 LSGM--LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
SG+ + +P+ T+NT++ +G+V R+++K G ++ ILI
Sbjct: 113 FSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILING 172
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWT----SSTYNNVIEAFSD--MGDAKHMEYTFEQMHA 384
K + + + +R+++ W+ Y+ +I+ + D + YT +M
Sbjct: 173 VCK---IGETRAAIRLLRRIE-RWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYT--EMVG 226
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
+G+ D T+ L++G+ G ++ I + I ++ Y ++ A K + E
Sbjct: 227 KGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKE 286
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYA 472
E V M + D +S + + Y
Sbjct: 287 AENVLAVMVKACVNLDVVVYSTLMDGYC 314
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 83/210 (39%), Gaps = 3/210 (1%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P + N IL N + Y++ ++P+ T NI+I + S
Sbjct: 56 PHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSG 115
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ + KL + + T N +++ G K +++ A+G + ++ LING
Sbjct: 116 VSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCK 175
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
G I +R + I NV Y+ +I K + E +Y M K PD T
Sbjct: 176 IGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVT 235
Query: 464 FSIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
+SI+ + G ++ L E M+LE
Sbjct: 236 YSILVSGFCIVGQLNRAIDLLNE---MVLE 262
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 17/134 (12%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ +F +K+Q +P T+ LL L K G+ + A + F +++ +G YT +
Sbjct: 426 RAIALFNKMKDQAI-RPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVM 484
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV-DAMRFELIETLYQDMDER 244
+ C+ L+DEA ++M+ C+ DA+ FE++ + D DE
Sbjct: 485 INGLCKEGLLDEALALQSRMED---------------NGCISDAVTFEIMIRAFFDKDEN 529
Query: 245 SVTPNTVTQNIVLG 258
V + I G
Sbjct: 530 DKAEKLVREMIARG 543
>gi|326507498|dbj|BAK03142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1043
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 171/381 (44%), Gaps = 11/381 (2%)
Query: 119 VLKKQ--WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIE 176
VL++Q W QA F +K Q Y+P Y LL G +G+ ELA + F EM+E G+E
Sbjct: 146 VLREQRGWRQAHDFFSWMKLQLCYEPSVVAYTILLRAYGNAGKIELAEEAFLEMLEAGVE 205
Query: 177 PTPELYTALLAAYCRNSLIDEAFV---TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
P LL AY R + + + +P + S+L K + L
Sbjct: 206 PDAVACGTLLCAYARRGRHGDMMLFYKATCRRGVVPPMSAFNFMLSSLQKHRLHGKVIHL 265
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
+ + + + +V PN T +V+G + K G+ ++ +VL G + + P+ T ++++
Sbjct: 266 WKHMMEMEEANNVVPNHFTYTVVIGSFVKEGLLEESMQVL-GKMRMSRLVPEEATYSSLI 324
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
S+ A G+ + YE+ R GI P T L+ Y K Y K S+ M + +
Sbjct: 325 SLSARHGRGEHAVMLYEEMRAHGIVPSNYTCASLLALYDKSEDYSKALSLFSEMERSRVV 384
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
Y +I + +G + TFE++ G+ +D +T+ + + NAG + + +
Sbjct: 385 IDEVIYGILIRIYGKIGLYDDAQRTFEEIDNAGLLSDEQTYVAMAQVHMNAGNYDRALLV 444
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ + ++ Y++++ + +D+ E ++ + K+ PD + + Y K
Sbjct: 445 MGSMRSRNVTPSLFSYSSLLRCHVVMEDIAAAEEAFRALC-KYGLPDVFCCNDLLRLYFK 503
Query: 474 EGMNDKVYA----LEQEKLQM 490
G +K A + +E +Q+
Sbjct: 504 LGQLEKASAFILNMRKEDIQL 524
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 154/342 (45%), Gaps = 17/342 (4%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P++ L+V G+ + + A ++F + P +Y A++ A C+ I+EA+
Sbjct: 644 KPEDSATATLIVQYGQEQKLDQAEELFESASTSFPKGGP-VYNAMVDALCKCGKIEEAYH 702
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ-----DMDERSVTPNTVTQNI 255
+M + + DV T S L+ +F+ E + +++ +V NT +++
Sbjct: 703 LFMKMADQGHSR-DVVTISILVTHLTKHGKFQEAENIIHGCFNGEVELDTVVYNTFIKSM 761
Query: 256 VLGG--YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
+ G Y A ++D+M + SG+ S + T N ++SV+ G+++ + +
Sbjct: 762 LESGKLYSAASIYDRM--IFSGVPRS------LQTFNIMISVYGLGGKLEKATEMFTAAQ 813
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
G+ + + + ++ YGK + S + M++ ++N++I A++ G
Sbjct: 814 ELGLPIDEKLYTNMLNFYGKAGRHQDASLLFNRMKEQGIMPGKISFNSMINAYATSGLHD 873
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
E F++MH+ G D+ T+ LI Y+ + + K +++ I + ++ +I
Sbjct: 874 DAEIVFQEMHSHGQVPDSMTYLALIRAYSESRCYSKAEETIQNMLGSGITPSCPHFSHLI 933
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
A + + E +R+ +M+E D M AY + G
Sbjct: 934 FAFLTEGQIDEAQRICSQMQEIGVAVDLACCRAMMRAYLEHG 975
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 135/345 (39%), Gaps = 44/345 (12%)
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKT- 207
+L+ + G +A+ + ++ E G++P L+ Y + +D+A T
Sbjct: 617 QLIRKFAREGSACVAKFLHEQLTELGVKPEDSATATLIVQYGQEQKLDQAEELFESASTS 676
Query: 208 LPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFD 267
P P Y+ ++ A + E L+ M ++ + + VT +I++ K G F
Sbjct: 677 FPKGGP---VYNAMVDALCKCGKIEEAYHLFMKMADQGHSRDVVTISILVTHLTKHGKFQ 733
Query: 268 QMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
+ E ++ G + + D NT + G++ Y++ G+ +TFNI+
Sbjct: 734 EAENIIHGCF-NGEVELDTVVYNTFIKSMLESGKLYSAASIYDRMIFSGVPRSLQTFNIM 792
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
I YG +K + + ++L P Y N++ + G + F +M +G+
Sbjct: 793 ISVYGLGGKLEKATEMFTAAQELGLPIDEKLYTNMLNFYGKAGRHQDASLLFNRMKEQGI 852
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
+F +IN YA +GL DD E
Sbjct: 853 MPGKISFNSMINAYATSGLH--------------------------------DD---AEI 877
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLL 492
V++ M PDS T+ + AY++ + Y+ +E +Q +L
Sbjct: 878 VFQEMHSHGQVPDSMTYLALIRAYSE----SRCYSKAEETIQNML 918
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 125/301 (41%), Gaps = 7/301 (2%)
Query: 175 IEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELI 234
+ P YT ++ ++ + L++E+ L +M+ + P+ TYS+LI R E
Sbjct: 278 VVPNHFTYTVVIGSFVKEGLLEESMQVLGKMR-MSRLVPEEATYSSLISLSARHGRGEHA 336
Query: 235 ETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILS 294
LY++M + P+ T +L Y K+ + + + S M E + D ++
Sbjct: 337 VMLYEEMRAHGIVPSNYTCASLLALYDKSEDYSKALSLFSEM-ERSRVVIDEVIYGILIR 395
Query: 295 VFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 354
++ G D +R +E+ N G+ + +T+ + + YD+ VM MR
Sbjct: 396 IYGKIGLYDDAQRTFEEIDNAGLLSDEQTYVAMAQVHMNAGNYDRALLVMGSMRSRNVTP 455
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC--LINGYANAGLFHKVIS 412
+ +Y++++ M D E F + G+ FCC L+ Y G K +
Sbjct: 456 SLFSYSSLLRCHVVMEDIAAAEEAFRALCKYGLP---DVFCCNDLLRLYFKLGQLEKASA 512
Query: 413 SVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
+ K I + + V+ C K+ + + +++ K M S T M E YA
Sbjct: 513 FILNMRKEDIQLDEALCMTVMEVCCKSGMIADADKILKEMNNGGVTMKSSTMVSMIEMYA 572
Query: 473 K 473
+
Sbjct: 573 R 573
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 145/372 (38%), Gaps = 19/372 (5%)
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
+ M KE Q E M ++ + KSG A K+ EM G+ +++ Y
Sbjct: 514 ILNMRKED--IQLDEALCMTVMEVCCKSGMIADADKILKEMNNGGVTMKSSTMVSMIEMY 571
Query: 190 CRN--SLIDE--------AFVT----LNQ-MKTLPNCQPDVYTYSTLIKACVDAMRFELI 234
RN S++ E A+ T LN +K+L + LI+ +
Sbjct: 572 ARNRTSVMQEQDTSPKALAYRTDSSALNATLKSLLDTPGGSSIACQLIRKFAREGSACVA 631
Query: 235 ETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILS 294
+ L++ + E V P ++ YG+ DQ E + S V+ N ++
Sbjct: 632 KFLHEQLTELGVKPEDSATATLIVQYGQEQKLDQAEELFESASTSFPKGGPVY--NAMVD 689
Query: 295 VFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 354
G+++ + K + G + T +IL+ K + + +++ +
Sbjct: 690 ALCKCGKIEEAYHLFMKMADQGHSRDVVTISILVTHLTKHGKFQEAENIIHGCFNGEVEL 749
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
+ YN I++ + G +++M G+ +TF +I+ Y G K
Sbjct: 750 DTVVYNTFIKSMLESGKLYSAASIYDRMIFSGVPRSLQTFNIMISVYGLGGKLEKATEMF 809
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
A +L + + Y +++ KA + ++ RMKE+ P +F+ M AYA
Sbjct: 810 TAAQELGLPIDEKLYTNMLNFYGKAGRHQDASLLFNRMKEQGIMPGKISFNSMINAYATS 869
Query: 475 GMNDKVYALEQE 486
G++D + QE
Sbjct: 870 GLHDDAEIVFQE 881
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 145/337 (43%), Gaps = 4/337 (1%)
Query: 139 FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA 198
+ P TY L+ L K + + A + M+ +G P Y ++ YC+ ++ EA
Sbjct: 179 YIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEA 238
Query: 199 FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
L PD TY +LI E L+ + + + P+ V N ++
Sbjct: 239 TELLKD-AIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVK 297
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
G + G+ +V++ M+E C PD+WT N +++ G + G
Sbjct: 298 GLCRQGLILHALQVMNEMVEDG-CHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYL 356
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P+ TFN +I Y K+ D ++E M + TYN+V+ G AK + T
Sbjct: 357 PDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNET 416
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS-VRLASKLQIAENVSFYNAVISACI 437
FE+M +G + + T+ LI + + VR++ + + +SF N +I
Sbjct: 417 FEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISF-NTLIHGFC 475
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
+ DL +++++ EK ++TF+I+ AY+ +
Sbjct: 476 RNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSK 512
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 130/279 (46%), Gaps = 3/279 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL++F + + +P Y L+ L + G A +V NEMVE+G P Y +
Sbjct: 272 RALELFNEAQAKDL-KPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIV 330
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ I +A V +N + PDV+T++T+I ++ + L + M
Sbjct: 331 INGLCKMGNISDAAVVMND-AIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYG 389
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+ +T N VL G KAG ++ M+ C+P+ T N ++ F Q++
Sbjct: 390 IAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKG-CRPNAITYNILIENFCKINQLEEA 448
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ G+ P+T +FN LI + + D + + + + + T+ T+N +I A
Sbjct: 449 SGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGA 508
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
+S + + E F +M ++G K D T+ L++G A
Sbjct: 509 YSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKA 547
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 139/357 (38%), Gaps = 31/357 (8%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P Y ++ L + + A KV+ M+ G+ P +T + ++C + V
Sbjct: 8 PAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFC---ITGRPHVA 64
Query: 202 LNQMKTLP--NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L +++LP C Y T+++ L+ +M R V P+ T N VL
Sbjct: 65 LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDV----WTMNTILSVFANKGQVDMMERWYEKFRNF 315
+ G D ME SG L + K + +T N + G+++ E +
Sbjct: 125 LCQKG--DIME---SGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY 179
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ----FPWTSSTYNNVIEAFSDMGD 371
I P+ T+N L+ K K+ +Y+R++ P TYN +I+ +
Sbjct: 180 -IAPDVVTYNTLMRGLCKD---SKVQEAAQYLRRMMNQGCIP-DDFTYNTIIDGYCKRDM 234
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNA 431
+ + +G D T+C LING G + + A + ++ YN+
Sbjct: 235 LQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNS 294
Query: 432 VISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG--------MNDKV 480
++ + ++ +V M E C PD T++I+ K G MND +
Sbjct: 295 LVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAI 351
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 90/237 (37%), Gaps = 4/237 (1%)
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
MD P N ++ DQ +V ML SA PD T + F G
Sbjct: 1 MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRML-SAGVAPDARTHTVRIKSFCITG 59
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
+ + R G D + + ++ G Y YD E +R+ FP +T+
Sbjct: 60 RPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFP-DVATF 118
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
NNV+ A GD ++ GM + T I G G + ++ V +
Sbjct: 119 NNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVE-SMD 177
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
IA +V YN ++ K + E + +RM + C PD T++ + + Y K M
Sbjct: 178 AYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDM 234
>gi|225456802|ref|XP_002275673.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Vitis vinifera]
gi|147821419|emb|CAN76897.1| hypothetical protein VITISV_010606 [Vitis vinifera]
Length = 692
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 162/335 (48%), Gaps = 4/335 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQ-PELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+P T ++ ++ K G + A + F M +G++ + E+ AL+ ++C L +EA
Sbjct: 274 RPDHVTCSIMITVMRKDGHSAKDAWEFFQRMNRKGVKWSLEVLGALIKSFCDEGLKNEAL 333
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+ ++M+ + Y+TL+ A + R E E L+ +M + V P + T NI++
Sbjct: 334 IIQSEMEK-KGISSNAIVYNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDA 392
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV-DMMERWYEKFRNFGID 318
Y + + +E +L M + +P+V + ++S + + ++ DM + + + GI
Sbjct: 393 YSRRMQPEIIENLLLEM-QDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKVGIK 451
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P + ++ LI AY ++K + E M++ + TY +++AF GD + +
Sbjct: 452 PTSHSYTALIHAYSVGGWHEKAYTAFENMKREGIKPSIETYTALLDAFRRAGDTQTLMKI 511
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
++ M ++ ++ TF L++G+A G + + + K+ V YN +++A +
Sbjct: 512 WKLMLSDKIEGTRVTFNILLDGFAKQGHYMEARDVIFEFGKIGFQPTVMTYNMLMNAYAR 571
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ ++ K M + +PDS T+S M AY +
Sbjct: 572 GGQHSRLPQLLKEMTSLNLKPDSITYSTMIYAYVR 606
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 139/340 (40%), Gaps = 46/340 (13%)
Query: 179 PELYTA-----LLAAYCRNSLIDEAFVTLNQMKTLPNCQP--DVYTYSTLIKACVDAMRF 231
P L TA L R + D+ V L + LP + DV Y++ I R+
Sbjct: 202 PSLVTARACSLLFPMLGRAGMGDDLMVLL---RNLPKTRQFRDVRIYNSAISGLSSCGRY 258
Query: 232 ELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG--------MFDQMER------------ 271
+ +Y +M+ ++ P+ VT +I++ K G F +M R
Sbjct: 259 DDAWKVYDEMETNNIRPDHVTCSIMITVMRKDGHSAKDAWEFFQRMNRKGVKWSLEVLGA 318
Query: 272 ---------------VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG 316
++ +E + NT++ ++ +V+ E + + + G
Sbjct: 319 LIKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDAYSKSNRVEEAEGLFGEMKAKG 378
Query: 317 IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME 376
+ P + T+NIL+ AY ++ + + +++ M+ + +Y +I A+ M
Sbjct: 379 VMPTSATYNILMDAYSRRMQPEIIENLLLEMQDMGLEPNVKSYTCLISAYGRQKKMSDMA 438
Query: 377 Y-TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
F +M G+K + ++ LI+ Y+ G K ++ + I ++ Y A++ A
Sbjct: 439 ADAFLRMKKVGIKPTSHSYTALIHAYSVGGWHEKAYTAFENMKREGIKPSIETYTALLDA 498
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+A D + +++K M TF+I+ + +AK+G
Sbjct: 499 FRRAGDTQTLMKIWKLMLSDKIEGTRVTFNILLDGFAKQG 538
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 107/232 (46%), Gaps = 7/232 (3%)
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV--DMMERWYEK 311
N + G G +D +V M E+ +PD T + +++V G D E ++++
Sbjct: 246 NSAISGLSSCGRYDDAWKVYDEM-ETNNIRPDHVTCSIMITVMRKDGHSAKDAWE-FFQR 303
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
G+ LI ++ + + ++ + M K + YN +++A+S
Sbjct: 304 MNRKGVKWSLEVLGALIKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDAYSKSNR 363
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK-LQIAENVSFYN 430
+ E F +M A+G+ + T+ L++ Y+ + ++I ++ L + + + NV Y
Sbjct: 364 VEEAEGLFGEMKAKGVMPTSATYNILMDAYSRR-MQPEIIENLLLEMQDMGLEPNVKSYT 422
Query: 431 AVISACIKADDLMEME-RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
+ISA + + +M + RMK+ +P S +++ + AY+ G ++K Y
Sbjct: 423 CLISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVGGWHEKAY 474
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 139/338 (41%), Gaps = 21/338 (6%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P +Y ++ L K G+ + A +F+EM+ +G P Y +++ C+ +D+A
Sbjct: 137 PNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAV 196
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L QM D + E L + M + P+ VT ++++ Y
Sbjct: 197 LQQM--------------------FDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYC 236
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G + + M+ PD +T T+L +A KG + M GI E
Sbjct: 237 KIGRCTEARNIFDSMVRRGQ-NPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLED 295
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
FNILI AY K DK + MR+ F TY VI+ G + F Q
Sbjct: 296 HVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQ 355
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M +EG+ D TF LI+G G + KV I N F N ++ + K
Sbjct: 356 MVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGR 415
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
++E + ++ +PD +++I+ + Y +G D+
Sbjct: 416 VLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDE 453
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 160/390 (41%), Gaps = 45/390 (11%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ F ++++ F P TY ++ +L K+G+ E A F++MV EG+ P +T+L
Sbjct: 313 KAMTAFIEMRQKGF-SPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSL 371
Query: 186 LAAYCR--------------------------NSLID---------EAFVTLNQMKTLPN 210
+ C N+++D EA +Q+ +
Sbjct: 372 IHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHV-G 430
Query: 211 CQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+PDV +Y+ LI C+D E I+ L + M + P+ VT + +L GY K G D
Sbjct: 431 VKPDVVSYTILIDGYCLDGKMDESIKLLGR-MVSIGLRPDNVTYSALLNGYCKNGRVDDA 489
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+ M S KP+ T N IL + G+V +Y K + GI T+NI++G
Sbjct: 490 LALYREMF-SKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLG 548
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+ D+ + + +R +F T+N +I +G + F + G+
Sbjct: 549 GLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVP 608
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
D + +I + GL + K N NA++ ++ D+
Sbjct: 609 DAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYL 668
Query: 450 KRMKEKHCRPDSET----FSIMTE-AYAKE 474
++ EK ++ T SI++E Y KE
Sbjct: 669 TKIDEKEYSVEASTAVLLISIVSERKYQKE 698
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/413 (20%), Positives = 171/413 (41%), Gaps = 47/413 (11%)
Query: 101 KAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQP 160
KA+A V + D K Q +A+++ + + QP TY L+ K G+
Sbjct: 186 KAQAMDKAEAVLQQMFD---KGQLEEAVRLLKKMSGGGL-QPDVVTYSLLIDYYCKIGRC 241
Query: 161 ELARKVFNEMVEEGIEPTPELYTALL---------------------------------- 186
AR +F+ MV G P Y LL
Sbjct: 242 TEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNIL 301
Query: 187 -AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
AY +N +D+A +M+ P+V TY+T+I A R E + + M
Sbjct: 302 IRAYAKNETLDKAMTAFIEMRQ-KGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEG 360
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
++P+ +T ++ G G + ++E++ M+ P+ +NTI+ +G+V
Sbjct: 361 LSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGI-HPNAIFLNTIMDSLCKEGRVLEA 419
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++++ + G+ P+ ++ ILI Y D+ ++ M + + TY+ ++
Sbjct: 420 HDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNG 479
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL---QI 422
+ G + +M ++ +K + T+ +++G +AG +V+++ K+ I
Sbjct: 480 YCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAG---RVVAAREFYMKIVDSGI 536
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++ YN V+ + + E R+++ ++ K + + TF+IM K G
Sbjct: 537 QLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVG 589
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 134/340 (39%), Gaps = 34/340 (10%)
Query: 162 LARKVFNEMVEEGIEPTPE---LYTALLAAYCRNSLIDEAF--------VTLNQMKTLP- 209
LA +FN M + G+ + L+ +C L+D A ++ M
Sbjct: 74 LAVSLFNTMAQVGVNKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGY 133
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
NC P+V +Y+ +I + TL+ +M + PN VT N V+ G KA D+
Sbjct: 134 NCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKA 193
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
E VL M + KGQ++ R +K G+ P+ T+++LI
Sbjct: 194 EAVLQQMFD--------------------KGQLEEAVRLLKKMSGGGLQPDVVTYSLLID 233
Query: 330 AYGKKRMYDKMSSVMEYM-RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
Y K + ++ + M R+ Q P + TY ++ ++ G M M +G+
Sbjct: 234 YYCKIGRCTEARNIFDSMVRRGQNP-DAYTYRTLLHGYATKGALVDMHDLLALMIQDGIP 292
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
+ F LI YA K +++ + + NV Y VI KA + +
Sbjct: 293 LEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSH 352
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
+ +M + PD TF+ + G KV L E +
Sbjct: 353 FSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMI 392
>gi|297733647|emb|CBI14894.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 162/335 (48%), Gaps = 4/335 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQ-PELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+P T ++ ++ K G + A + F M +G++ + E+ AL+ ++C L +EA
Sbjct: 274 RPDHVTCSIMITVMRKDGHSAKDAWEFFQRMNRKGVKWSLEVLGALIKSFCDEGLKNEAL 333
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+ ++M+ + Y+TL+ A + R E E L+ +M + V P + T NI++
Sbjct: 334 IIQSEMEK-KGISSNAIVYNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDA 392
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV-DMMERWYEKFRNFGID 318
Y + + +E +L M + +P+V + ++S + + ++ DM + + + GI
Sbjct: 393 YSRRMQPEIIENLLLEM-QDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKVGIK 451
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P + ++ LI AY ++K + E M++ + TY +++AF GD + +
Sbjct: 452 PTSHSYTALIHAYSVGGWHEKAYTAFENMKREGIKPSIETYTALLDAFRRAGDTQTLMKI 511
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
++ M ++ ++ TF L++G+A G + + + K+ V YN +++A +
Sbjct: 512 WKLMLSDKIEGTRVTFNILLDGFAKQGHYMEARDVIFEFGKIGFQPTVMTYNMLMNAYAR 571
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ ++ K M + +PDS T+S M AY +
Sbjct: 572 GGQHSRLPQLLKEMTSLNLKPDSITYSTMIYAYVR 606
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 107/232 (46%), Gaps = 7/232 (3%)
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV--DMMERWYEK 311
N + G G +D +V M E+ +PD T + +++V G D E ++++
Sbjct: 246 NSAISGLSSCGRYDDAWKVYDEM-ETNNIRPDHVTCSIMITVMRKDGHSAKDAWE-FFQR 303
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
G+ LI ++ + + ++ + M K + YN +++A+S
Sbjct: 304 MNRKGVKWSLEVLGALIKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDAYSKSNR 363
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK-LQIAENVSFYN 430
+ E F +M A+G+ + T+ L++ Y+ + ++I ++ L + + + NV Y
Sbjct: 364 VEEAEGLFGEMKAKGVMPTSATYNILMDAYSRR-MQPEIIENLLLEMQDMGLEPNVKSYT 422
Query: 431 AVISACIKADDLMEME-RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
+ISA + + +M + RMK+ +P S +++ + AY+ G ++K Y
Sbjct: 423 CLISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVGGWHEKAY 474
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 160/367 (43%), Gaps = 18/367 (4%)
Query: 126 QALQVFEMLKEQ--PFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
+AL++ M+ + P +Y ++ K G + A ++EM++ I P Y+
Sbjct: 176 EALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYS 235
Query: 184 ALLAAYCRNSLIDEAFVTLNQM---KTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQ 239
+++AA C+ +D+A L M +PNC TY++++ C E I L +
Sbjct: 236 SIIAALCKGQAMDKAMEVLTTMVKNGVMPNCM----TYNSILHGYCSSEQPKEAIGFL-K 290
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
M V P+ VT N ++ K G + ++ M + +PD+ T T+L +A K
Sbjct: 291 KMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGL-EPDIATYCTLLQGYATK 349
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G + M + GI P+ FNILI AY K+ D+ V MR+ TY
Sbjct: 350 GALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTY 409
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
VI G FEQM EG+ + + LI+ +F K + L +
Sbjct: 410 GAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLC---IFDKWDKAEELILE 466
Query: 420 L---QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ I N F+N++I + K ++E E+++ M +P+ T+S + + Y G
Sbjct: 467 MLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGK 526
Query: 477 NDKVYAL 483
D+ L
Sbjct: 527 MDEATKL 533
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 156/351 (44%), Gaps = 11/351 (3%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF-V 200
P TY L+ ++G+ +L +V++G +T LL C + +A +
Sbjct: 85 PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRF-ELIETLYQDMDER--SVTPNTVTQNIVL 257
L +M L +C PDV++ + L+K D R E +E L+ D+R P+ V+ V+
Sbjct: 145 VLRRMTEL-SCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVI 203
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV--DMMERWYEKFRNF 315
G+ K G D+ ML+ PDV T ++I++ KGQ ME +N
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRRI-SPDVVTYSSIIAALC-KGQAMDKAMEVLTTMVKN- 260
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G+ P T+N ++ Y + ++ MR TYN++++ G +
Sbjct: 261 GVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEA 320
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
F+ M G++ D T+C L+ GYA G ++ + + L + I + +N +I A
Sbjct: 321 RKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICA 380
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALEQ 485
K + + E V+ +M++ P+ T+ + K G ++D + EQ
Sbjct: 381 YAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQ 431
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 143/352 (40%), Gaps = 16/352 (4%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L K+G+ ARK+F+ M + G+EP Y LL Y + E
Sbjct: 298 EPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHA 357
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L+ M PD + ++ LI A + + ++ M + + PN VT V+G
Sbjct: 358 LLDLM-VRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGIL 416
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K+G D M++ P++ +++ + D E + + GI
Sbjct: 417 CKSGSVDDAMLYFEQMIDEGL-TPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLN 475
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T FN +I ++ K+ + + + M ++ TY+ +I+ + G
Sbjct: 476 TIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLS 535
Query: 381 QMHAEGMKADTKTFCCLINGYANA-------GLFHKVISSVRLASKLQIAENVSFYNAVI 433
M + GMK D T+ LINGY LF +++SS ++ N+ YN ++
Sbjct: 536 SMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSS-------GVSPNIITYNIIL 588
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
+ +Y + + + + T++I+ K + D+ + Q
Sbjct: 589 QGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQ 640
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 114/296 (38%), Gaps = 36/296 (12%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ VF +++ P TY ++ +L KSG + A F +M++EG+ P +YT+L
Sbjct: 389 EAMLVFSKMRQHGL-NPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 447
Query: 186 LAAYC-----------------RNSLIDEAFVT-----------------LNQMKTLPNC 211
+ + C R ++ F L +
Sbjct: 448 IHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGV 507
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
+P+V TYSTLI A + + L M + P+ VT N ++ GY + D
Sbjct: 508 KPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALA 567
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+ M+ S P++ T N IL + + + Y G E T+NI++
Sbjct: 568 LFKEMVSSGV-SPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGL 626
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
K + D+ + + + + T+N +I A +G + F + G+
Sbjct: 627 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGL 682
>gi|298204410|emb|CBI16890.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 179/384 (46%), Gaps = 32/384 (8%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A+QVFE ++ F +P LL L K+ + KV+ +MV G+ P ++ L+
Sbjct: 171 AIQVFEHMRVHGF-KPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLI 229
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERS 245
A C++ +++A LN+M++ PD++TY+TLI C M +E + QD ER
Sbjct: 230 HACCKSGDVEKAEQLLNEMES-RFIFPDLFTYNTLISLYCKKGMHYEALGI--QDRMERG 286
Query: 246 -VTPNTVTQNIVLGGYGKAGMFDQMERVLS--GMLESATCKPDVWTMNTILSVFANKGQV 302
V+P+ VT N ++ G+ + + +E L ++E P V T N+IL +G++
Sbjct: 287 GVSPDIVTYNSLIYGFCRE--VNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKI 344
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL--------QFPW 354
R + ++P+ T N LI AY K M S M+ +K+ QF
Sbjct: 345 KDANRLLNEMSERKVEPDNVTCNTLINAYCK---IGDMGSAMKVKKKMLEAGLKPDQF-- 399
Query: 355 TSSTYNNVIEAFSDMGDAKHM-EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
T+ +I F + + E+ FE + A G T+ L++ Y + VI
Sbjct: 400 ---TFKALIHGFCKLHEVDSAKEFLFEMLDA-GFSPSYSTYSWLVDSYYDQDNKEAVIRL 455
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
S+ + ++S Y A+I K D + ER++ M+ K + DS ++ + AY K
Sbjct: 456 PDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFK 515
Query: 474 EG----MNDKVYALEQEKLQMLLE 493
G +D + +++ +L + L+
Sbjct: 516 AGKAIAASDMLDEMDKRRLMITLK 539
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 157/378 (41%), Gaps = 18/378 (4%)
Query: 129 QVFEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+ F+++KE + + P TY K++ L + + E A +F EM G+ P YT L+
Sbjct: 271 KAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILI 330
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
++C+ LI++A +M+++ C P V TY+ LI A + A + ++ M +
Sbjct: 331 DSFCKAGLIEQAQWLFEEMRSV-GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 389
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERV---LSGMLESA------------TCKPDVWTMNT 291
PN VT ++ G KAG + V L G +SA T P+V T
Sbjct: 390 RPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGA 449
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
++ +VD + + G +P ++ LI + K D V M K
Sbjct: 450 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCG 509
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
+ + TY ++I+ G QM + + T+ +I+G G K +
Sbjct: 510 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL 569
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
+ L + + NV Y A+I KA + ++ +M K C P+ T+ ++
Sbjct: 570 KLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 629
Query: 472 AKEGMNDKVYALEQEKLQ 489
G+ DK L E Q
Sbjct: 630 CAAGLLDKARLLLGEMKQ 647
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 156/375 (41%), Gaps = 35/375 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY LL K Q +++ N M+ EG P P L+ +L+ +YC A+
Sbjct: 140 PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKL 199
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMR------FELIETLYQDMDERSVTPNTVTQNI 255
LN+M T C P Y+ I + + +L E +Y +M + N V +
Sbjct: 200 LNRMTTC-GCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEM----LAANCVLNKV 254
Query: 256 VLGGYGKA----GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
+ + + G FD+ +++ M+ PD T + +++ + +V+ +++
Sbjct: 255 NVANFARCLCGVGKFDKAFQLIKEMMRKGF-VPDTSTYSKVITFLCHATKVEKAFLLFQE 313
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
+ G+ P+ T+ ILI ++ K + ++ + E MR + T TY +I A+
Sbjct: 314 MKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ 373
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISSVRLA------- 417
F +M G + + T+ L++G AG ++ K+I + A
Sbjct: 374 VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFP 433
Query: 418 --SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ +A NV Y A++ KA + + M C P+ + + + + K G
Sbjct: 434 CEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAG 493
Query: 476 MNDKVYALEQEKLQM 490
K+ + ++ LQM
Sbjct: 494 ---KIDSAQEVFLQM 505
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 147/383 (38%), Gaps = 46/383 (12%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y+P + TY L+ +L +GQ +L +V EM E G A C+ +A
Sbjct: 36 YRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADAL 95
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
M + + D + +I ++A F+ + M S PN VT +L G
Sbjct: 96 ----DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSG 151
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ K +R+++ M+ + C P+ N+++ + N+ + + G P
Sbjct: 152 FLKKKQLGWCKRIIN-MMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210
Query: 320 ETRTFNILIGAY-GKKRM----------------------------------------YD 338
+NI IG+ G++++ +D
Sbjct: 211 GYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFD 270
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
K +++ M + F +STY+ VI + F++M G+ D T+ LI
Sbjct: 271 KAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILI 330
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
+ + AGL + + + V Y A+I A +KA + + ++ RM + CR
Sbjct: 331 DSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCR 390
Query: 459 PDSETFSIMTEAYAKEGMNDKVY 481
P+ T+ + + K G K +
Sbjct: 391 PNDVTYGALVDGLCKAGNISKAF 413
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 121/274 (44%), Gaps = 28/274 (10%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y P TY L+ + K G+ +LA KV ++M+++ P YTA++ CR ++A
Sbjct: 510 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL 569
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L+ M+ C P+V TY+ LI A + +L L+ M + +PN VT +++
Sbjct: 570 KLLSLMEE-KGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINH 628
Query: 260 YGKAGMFDQMERVLSGM--------LESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
AG+ D+ +L M L+ C ++ + I S+ G ++ ME
Sbjct: 629 LCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASL----GILEEME----- 679
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK-LQFPWTSST----YNNVIEAF 366
++G P + +LI + K ++ ME ++ ++ P + T Y ++I+A
Sbjct: 680 --SYGTVPIAPVYGMLIDCFSKA---GRLEIAMELHKEMMEVPSSVKTDNDMYASLIQAL 734
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+ + +M G + F CLI G
Sbjct: 735 CLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKG 768
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 153/359 (42%), Gaps = 2/359 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A ++ + + P TY ++ L + G+ + A ++ EM +G+EP ++AL
Sbjct: 95 RACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSAL 154
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +C +DEA ++ T + +PDV TY+ LI + E + M+ R
Sbjct: 155 ITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRK 214
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN VT + +L G KAG DQ + M S C P+V T T++ +VD
Sbjct: 215 CVPNVVTYSSLLHGLCKAGDLDQALDLFRRM-TSKGCVPNVVTYTTLIHGLCAAHKVDAA 273
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++ P+T ++N L+ Y + ++ + + M TY ++
Sbjct: 274 RLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRG 333
Query: 366 FSDMGDAKHMEYTFEQMH-AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
F + + + E M A G+ D T+ ++ GY+ A F + ++ +A
Sbjct: 334 FCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAP 393
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
N Y+++I KA + V K M K P TF+ + A + G D+ + L
Sbjct: 394 NAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKL 452
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 176/397 (44%), Gaps = 47/397 (11%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL- 181
Q QAL FE ++E F P E TY ++ L K+ A +V EM +G P+L
Sbjct: 22 QLKQALACFEKMRE--FVAPNERTYNVVVNGLCKARLTSKAYEVLKEM-RDGKSVAPDLV 78
Query: 182 -YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI----------KAC--VDA 228
Y+ ++ +C+ +D A L +M T PDV TY++++ +AC V
Sbjct: 79 TYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVRE 138
Query: 229 MRFELIE-----------------------TLYQD-MDERSVTPNTVTQNIVLGGYGKAG 264
M+ + +E LY++ + S P+ VT ++ G+ K+G
Sbjct: 139 MKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSG 198
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
++ ++L G++E C P+V T +++L G +D + + + G P T+
Sbjct: 199 NLEKAMKML-GVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTY 257
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
LI D +M+ M P + +YN +++ + +G + + F++M
Sbjct: 258 TTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMAT 317
Query: 385 EGMKADTKTFCCLINGYANAGLFHK---VISSVRLASKLQIAENVSFYNAVISACIKADD 441
+ D T+ CL+ G+ NA + ++ +++ A+ I +V Y+ V++ +A
Sbjct: 318 KSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAA--GIDPDVVTYSIVVAGYSRAKR 375
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+E + M ++ P++ T+S + + K G D
Sbjct: 376 FVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVD 412
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 157/378 (41%), Gaps = 44/378 (11%)
Query: 113 ETFSDHVLKKQWFQALQVFEMLK------EQPFYQPKEGTYMKLLVLLGKSGQPELARKV 166
+ F+ L W A +V E LK ++P TY L+ KSG E A K+
Sbjct: 147 DKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKM 206
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
M P Y++LL C+ +D+A +M T C P+V TY+TLI
Sbjct: 207 LGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRM-TSKGCVPNVVTYTTLIHGLC 265
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
A + + L +M P+TV+ N +L GY + G ++ +++ M + +C PD
Sbjct: 266 AAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEM-ATKSCLPDR 324
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNF-GIDPETRTFNILIGAYGKKRMYDKMSSVME 345
T ++ F N +++ E + GIDP+ T++I++ Y + + +
Sbjct: 325 ITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRF-------- 376
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
+EA E+ ++M A + + T+ LI+G AG
Sbjct: 377 -----------------VEA---------AEF-IQEMIARNVAPNAVTYSSLIDGLCKAG 409
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ ++ ++ +V +N+VI A + D+ E ++ M P T++
Sbjct: 410 RVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYT 469
Query: 466 IMTEAYAKEGMNDKVYAL 483
+ E +++ G + Y L
Sbjct: 470 TLLEGFSRTGRMEIAYEL 487
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 149/343 (43%), Gaps = 12/343 (3%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY LL L K+G + A +F M +G P YT L+ C +D A +
Sbjct: 217 PNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLL 276
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+++M T C PD +Y+ L+ R E + L+++M +S P+ +T ++ G+
Sbjct: 277 MDEM-TATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFC 335
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
A ++ +L M +A PDV T + +++ ++ + + ++ + P
Sbjct: 336 NASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNA 395
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T++ LI K D V++ M + + T+N+VI A +GD
Sbjct: 396 VTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVA 455
Query: 382 MHAEGMKADTKTFCCLINGYANAG---LFHKVISSVRLASKLQ------IAENVSFYNAV 432
M A G++ T+ L+ G++ G + +++ +R +K + E ++A+
Sbjct: 456 MAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQA--FSAL 513
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
I KA ++ + V + ++ + C P E + + + G
Sbjct: 514 IRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAG 556
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 126/302 (41%), Gaps = 4/302 (1%)
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELI 234
+PT +T ++ +C+ + + +A +M+ P+ TY+ ++ C + +
Sbjct: 4 QPTVVTWTIIIDGFCKANQLKQALACFEKMREFV--APNERTYNVVVNGLCKARLTSKAY 61
Query: 235 ETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILS 294
E L + D +SV P+ VT + V+ G+ K G D+ +L M+ PDV T +++
Sbjct: 62 EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121
Query: 295 VFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK-MSSVMEYMRKLQFP 353
G++D + + G++P+ TF+ LI + R D+ + E + +
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWK 181
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
TY +I+ F G+ + M + T+ L++G AG + +
Sbjct: 182 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 241
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
R + NV Y +I A + + M C PD+ +++ + + Y +
Sbjct: 242 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCR 301
Query: 474 EG 475
G
Sbjct: 302 LG 303
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 6/198 (3%)
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
C+P V T I+ F Q+ +EK R F + P RT+N+++ K R+ K
Sbjct: 3 CQPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAY 61
Query: 342 SVMEYMRKLQ-FPWTSSTYNNVIEAFSDMGDA-KHMEYTFEQMHAEGMKADTKTFCCLIN 399
V++ MR + TY+ VI F G+ + E E + +G+ D T+ +++
Sbjct: 62 EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSF-YNAVISACIKADDLMEMERVYKR-MKEKHC 457
G G + VR KL+ E F ++A+I+ A + E ++YK +
Sbjct: 122 GLCRDGKMDRACEMVR-EMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSW 180
Query: 458 RPDSETFSIMTEAYAKEG 475
+PD T++ + + + K G
Sbjct: 181 KPDVVTYTALIDGFCKSG 198
>gi|384251704|gb|EIE25181.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 905
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 147/322 (45%), Gaps = 10/322 (3%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
YTA+++ +D A +M+ + N + +V+TY+ L+ C+ L Y M
Sbjct: 213 YTAMISMCIYQQDVDRAMDLAKEMR-VRNIERNVHTYTALMNVCIKCGNCPLALDTYNHM 271
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ PN VT N ++ YGK G+++Q +VL+ ++++ +P + T NT++ GQ
Sbjct: 272 RQDGACPNVVTYNTLIDVYGKMGLWEQGIKVLT-LMKTEGVEPVLRTYNTLIIACNMCGQ 330
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
Y++ + G P T+N LI AYGK DK+ V + M + TY++
Sbjct: 331 PREAMAVYKRMLDEGYSPNATTYNALISAYGKAGQLDKVMEVFQEMVHKGCERSVITYSS 390
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+I A G + F +M EG +T T+ LI A + K K
Sbjct: 391 LISACEKAGQWELALELFNEMAGEGCIPNTVTYNSLITACAQGAQWEKASEVFEQMQKGG 450
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM---ND 478
+V + A+IS+ K Y++M+ + C+PD+ F+ + + + G+
Sbjct: 451 CTPDVVTFTALISSYEKGGQWRRALGAYEQMRLQRCKPDAIVFNAIIDTLWETGVIWAQR 510
Query: 479 KVYALEQEKLQMLLEASGHWQQ 500
K AL Q+ ++ GH++Q
Sbjct: 511 KALALFQQAVE-----DGHFKQ 527
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 118/262 (45%), Gaps = 2/262 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ + K G LA +N M ++G P Y L+ Y + L ++ L M
Sbjct: 247 TYTALMNVCIKCGNCPLALDTYNHMRQDGACPNVVTYNTLIDVYGKMGLWEQGIKVLTLM 306
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
KT +P + TY+TLI AC + +Y+ M + +PN T N ++ YGKAG
Sbjct: 307 KT-EGVEPVLRTYNTLIIACNMCGQPREAMAVYKRMLDEGYSPNATTYNALISAYGKAGQ 365
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D++ V M+ C+ V T ++++S GQ ++ + + G P T T+N
Sbjct: 366 LDKVMEVFQEMVHKG-CERSVITYSSLISACEKAGQWELALELFNEMAGEGCIPNTVTYN 424
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
LI A + ++K S V E M+K T+ +I ++ G + +EQM +
Sbjct: 425 SLITACAQGAQWEKASEVFEQMQKGGCTPDVVTFTALISSYEKGGQWRRALGAYEQMRLQ 484
Query: 386 GMKADTKTFCCLINGYANAGLF 407
K D F +I+ G+
Sbjct: 485 RCKPDAIVFNAIIDTLWETGVI 506
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 6/220 (2%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
NT+ + + L W Q ++V ++K + +P TY L++ GQP A V+
Sbjct: 284 NTLIDVYGKMGL---WEQGIKVLTLMKTEGV-EPVLRTYNTLIIACNMCGQPREAMAVYK 339
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
M++EG P Y AL++AY + +D+ +M C+ V TYS+LI AC A
Sbjct: 340 RMLDEGYSPNATTYNALISAYGKAGQLDKVMEVFQEM-VHKGCERSVITYSSLISACEKA 398
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
++EL L+ +M PNTVT N ++ + +++ V M + C PDV T
Sbjct: 399 GQWELALELFNEMAGEGCIPNTVTYNSLITACAQGAQWEKASEVFEQM-QKGGCTPDVVT 457
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
++S + GQ YE+ R P+ FN +I
Sbjct: 458 FTALISSYEKGGQWRRALGAYEQMRLQRCKPDAIVFNAII 497
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%)
Query: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
T+ +I ++ D+ + + MR TY ++ G+ T+ M
Sbjct: 212 TYTAMISMCIYQQDVDRAMDLAKEMRVRNIERNVHTYTALMNVCIKCGNCPLALDTYNHM 271
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
+G + T+ LI+ Y GL+ + I + L + + YN +I AC
Sbjct: 272 RQDGACPNVVTYNTLIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLIIACNMCGQP 331
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
E VYKRM ++ P++ T++ + AY K G DKV + QE + E S
Sbjct: 332 REAMAVYKRMLDEGYSPNATTYNALISAYGKAGQLDKVMEVFQEMVHKGCERS 384
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 159/354 (44%), Gaps = 8/354 (2%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP T+ LL L +S Q E AR++ M E G P +Y AL++ Y + +AF
Sbjct: 7 QPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFK 66
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +M +C P V TY+ ++ A R + L +M ++ +PN T N+++ G
Sbjct: 67 FLAEM-VKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGL 125
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ D+ +++L M PDV T N+ + +VD ++ + + P+
Sbjct: 126 CEERKLDEAKKMLEEMAVRGY-FPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPD 181
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
++ +I K D S +++ M TY+++I+ F G+ + +
Sbjct: 182 VVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLD 241
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
M G + + + L+ G K + + +V YNA I KA+
Sbjct: 242 SMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAE 301
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALEQ--EKLQML 491
+ + + V+ RM E+ C P++ ++S++ E K+ ++D + +EQ EK Q++
Sbjct: 302 RVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIV 355
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 156/371 (42%), Gaps = 11/371 (2%)
Query: 122 KQWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
K + QA + EM+K P TY ++ L K+G+ + A K+ +EM ++G P
Sbjct: 59 KDFGQAFKFLAEMVKNHCL--PTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIY 116
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
Y ++ C +DEA L +M + PDV TY++ IK R +
Sbjct: 117 TYNVIVEGLCEERKLDEAKKMLEEM-AVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLAR 175
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M VTP+ V+ V+ G K+G D R+L M C PDV T ++++ F G
Sbjct: 176 M---PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRG-CTPDVVTYSSLIDGFCKGG 231
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+V+ + G P +N L+GA + K ++ M + F +YN
Sbjct: 232 EVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYN 291
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA-SK 419
I+ K + F++M G + ++ L+ I+ V A K
Sbjct: 292 ACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREK 351
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVY-KRMKEKHCRPDSETFSIMTEAYAKEGMND 478
QI ++ Y ++ K E ++ K + EK C PD +++M +++ K D
Sbjct: 352 YQIV-DILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQID 410
Query: 479 KVYALEQEKLQ 489
K + ++ L+
Sbjct: 411 KALQIHKQMLE 421
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 124/296 (41%), Gaps = 15/296 (5%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P Y LL L + G A + EM G P Y A + C+ + +A
Sbjct: 249 RPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKA 308
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
++M C P+ +YS L++ + TL + E+ + + ++L G
Sbjct: 309 VFDRMVE-RGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGL 367
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF--RNFGID 318
K G FD+ + S +L+ C+PDV+ N +L + Q+D + +++ RN
Sbjct: 368 CKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC--- 424
Query: 319 PETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
T+NIL+ G R+ D + ++ + + P TY +++A G +
Sbjct: 425 CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIP-DFVTYGTLVDAMCKCGKSAAALE 483
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
FE+ G D T+ LI G + + + + L +KL +A +NA+I
Sbjct: 484 LFEEAVKGGCVPDVVTYSALITGLVHENMAEE---AYLLFTKLDVA----LWNAMI 532
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/242 (19%), Positives = 94/242 (38%), Gaps = 32/242 (13%)
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
+C+PD +T +L Q++ + + + G P+ +N LI Y K + + +
Sbjct: 5 SCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQA 64
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+ M K T TY N+++ G K ++M +G + T+ ++ G
Sbjct: 65 FKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEG 124
Query: 401 Y----------------ANAGLFHKVIS----------------SVRLASKLQIAENVSF 428
A G F V++ + + +++ + +V
Sbjct: 125 LCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVS 184
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
Y VI+ K+ DL R+ +M + C PD T+S + + + K G ++ L L
Sbjct: 185 YTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSML 244
Query: 489 QM 490
++
Sbjct: 245 KL 246
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 24/178 (13%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+ P TY L+ + K G+ A ++F E V+ G P Y+AL+ ++ +EA+
Sbjct: 458 FIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAY 517
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+ ++ DV ++ +I + +L L+ ++ E V PN T + G
Sbjct: 518 LLFTKL--------DVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISG 569
Query: 260 -------YGKA-GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
GKA G+FD+ V G PD++ NT++ VFA G ++ R +
Sbjct: 570 KLVKAESLGKARGLFDRA--VKGGFF------PDLFVANTLIDVFAKCGDLEEARRIF 619
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 173/403 (42%), Gaps = 41/403 (10%)
Query: 129 QVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
QV+ EML+++ P TY K++ K G E A + +++VE G++P YT+L+
Sbjct: 204 QVYMEMLEDK--VCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIM 261
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQ----------------------------------- 212
YC+ +D AF N+M L C+
Sbjct: 262 GYCQRKDLDSAFKVFNEM-PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECF 320
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
P V TY+ LIK+ + R L ++M+E + PN T +++ F++ +
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
L MLE P+V T N +++ + +G ++ E + + P TRT+N LI Y
Sbjct: 381 LGQMLEKGL-MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC 439
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K ++ M + + + + P TYN++I+ G+ M+ G+ D
Sbjct: 440 KSNVHKAMGVLNKMLERKVLP-DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW 498
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
T+ +I+ + + + + NV Y A+I KA + E + ++M
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 453 KEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
K+C P+S TF+ + +G + LE++ +++ L+ +
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 152/362 (41%), Gaps = 3/362 (0%)
Query: 136 EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI 195
E+ +P TY L+ L + E AR++ +M+E+G+ P Y AL+ YC+ +I
Sbjct: 350 EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI 255
++A + M++ P+ TY+ LIK + + + L M ER V P+ VT N
Sbjct: 410 EDAVDVVELMES-RKLSPNTRTYNELIKGYCKSNVHKAMGVL-NKMLERKVLPDVVTYNS 467
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
++ G ++G FD R+LS M + PD WT +++ +V+ ++
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLV-PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G++P + LI Y K D+ ++E M S T+N +I G K
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
E+M G++ T LI+ G F S + + Y I
Sbjct: 587 TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQT 646
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
+ L++ E + +M+E PD T+S + + Y G + + + + E S
Sbjct: 647 YCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPS 706
Query: 496 GH 497
H
Sbjct: 707 QH 708
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 147/345 (42%), Gaps = 6/345 (1%)
Query: 132 EMLKEQPF---YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAA 188
+M K++ F Y+ G Y LL L + G + ++V+ EM+E+ + P Y ++
Sbjct: 168 KMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNG 227
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP 248
YC+ ++EA ++++ PD +TY++LI + ++ +M +
Sbjct: 228 YCKLGNVEEANQYVSKI-VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRR 286
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW 308
N V ++ G A D+ + M + C P V T ++ +
Sbjct: 287 NEVAYTHLIHGLCVARRIDEAMDLFVKM-KDDECFPTVRTYTVLIKSLCGSERKSEALNL 345
Query: 309 YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD 368
++ GI P T+ +LI + + ++K ++ M + TYN +I +
Sbjct: 346 VKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCK 405
Query: 369 MGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSF 428
G + E M + + +T+T+ LI GY + + HK + + + ++ +V
Sbjct: 406 RGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVT 464
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
YN++I ++ + R+ M ++ PD T++ M ++ K
Sbjct: 465 YNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK 509
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 158/396 (39%), Gaps = 56/396 (14%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL + + P Y+ +Y LL LL +G + K+ M++ LY L
Sbjct: 106 ALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDL 165
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL---YQDMDE 243
CR DE F + K + C Y+TL+ + RF L++ + Y +M E
Sbjct: 166 ---CRKMNKDERFEL--KYKLIIGC------YNTLLNS---LARFGLVDEMKQVYMEMLE 211
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
V PN T N ++ GY K G ++ + +S ++E+ PD +T +++ + + +D
Sbjct: 212 DKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGL-DPDFFTYTSLIMGYCQRKDLD 270
Query: 304 MMERWYEKFRNFG--------------------ID---------------PETRTFNILI 328
+ + + G ID P RT+ +LI
Sbjct: 271 SAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLI 330
Query: 329 GAY-GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
+ G +R + ++ V E M + TY +I++ + QM +G+
Sbjct: 331 KSLCGSERKSEALNLVKE-MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
+ T+ LINGY G+ + V L +++ N YN +I K++ M
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAM-G 448
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
V +M E+ PD T++ + + + G D Y L
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 109/278 (39%), Gaps = 19/278 (6%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY + + G+ A + +M E G+ P Y++L+ Y + AF
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFD 693
Query: 201 TLNQMKTLPNCQPDVYTYSTLIK------------------ACVDAMRFELIETLYQDMD 242
L +M+ C+P +T+ +LIK A + M F+ + L + M
Sbjct: 694 VLKRMRD-TGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMV 752
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
E SVTPN + ++ G + G E+V M + P N +LS +
Sbjct: 753 EHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKH 812
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ + + G P+ + +LI KK ++ +SV + + + + + +
Sbjct: 813 NEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKII 872
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
I+ G + F M G K ++T+ LI G
Sbjct: 873 IDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 153/335 (45%), Gaps = 2/335 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P +G L+ L K G+ A +++ ++E+G AL+ C+ + EA
Sbjct: 520 RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVR 579
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +M D TY+TLI C + E L +M ++ + P+T T N+++ G
Sbjct: 580 LLKKMLE-RGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGM 638
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ G D+ L +S P+V+T ++ + +++ E+ + + ++
Sbjct: 639 CRIGKLDEAVN-LWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELN 697
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+ +N LI AY + + + + MR P T++TY+++I ++G + + +
Sbjct: 698 SVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLID 757
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M EG+ + + LI GY G KV++ ++ S I N Y +I K+
Sbjct: 758 EMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSG 817
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
D+ ++ M K PD+ T++++T + KEG
Sbjct: 818 DMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEG 852
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 145/370 (39%), Gaps = 37/370 (10%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
P T ++ K GQ E A + EM+ G P +T ++ C NS + A
Sbjct: 450 NPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALR 509
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L +M L N +P+ +TL+ C + + +E L+ + E+ N VT N ++ G
Sbjct: 510 FLREM-LLRNMRPNDGLLTTLVGGLCKEGKHSDAVE-LWFRLLEKGFGANLVTTNALIHG 567
Query: 260 YGKAGMFDQMERVLSGMLE--------------SATCK--------------------PD 285
K G + R+L MLE S CK PD
Sbjct: 568 LCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPD 627
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
+T N ++ G++D + + ++ + P T+ ++I Y K ++ +
Sbjct: 628 TFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFT 687
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
+ S YN +I A+ G+ + M ++G+ T T+ LI+G N G
Sbjct: 688 ELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIG 747
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ K + NV Y A+I K + ++ V + M P+ T++
Sbjct: 748 RMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYT 807
Query: 466 IMTEAYAKEG 475
+M + Y+K G
Sbjct: 808 VMIDGYSKSG 817
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 147/341 (43%), Gaps = 22/341 (6%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
K G+ E A ++F +M + G+ P Y L+ C++ +DEAF +M +
Sbjct: 325 KGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVK-DGVNATL 383
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
TYS LI + +F ++ ++ E+ TPN V N ++ GY K G R+
Sbjct: 384 ITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGD 443
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF--RNFGIDPETRTFNILIGAYGK 333
M+ S P+ T+N+I+ F GQ++ E E+ R F I+P F +I
Sbjct: 444 MV-SKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPG--AFTTIIHWLC- 499
Query: 334 KRMYDKMSSVMEYMRKLQF----PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
M + S + ++R++ P ++ G + ++ +G A
Sbjct: 500 --MNSRFESALRFLREMLLRNMRP-NDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGA 556
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQ----IAENVSFYNAVISACIKADDLMEM 445
+ T LI+G G + +VRL K+ + + ++ YN +IS C K + E
Sbjct: 557 NLVTTNALIHGLCKTGNMQE---AVRLLKKMLERGFVLDKIT-YNTLISGCCKEGKVEEG 612
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
++ M ++ PD+ T++++ + G D+ L E
Sbjct: 613 FKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNE 653
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 155/391 (39%), Gaps = 6/391 (1%)
Query: 104 AKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELA 163
A A V+ + + + A+ VF L + + P T LL L K+ + E +
Sbjct: 240 AVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVF-PTVKTCTFLLSSLVKANELEKS 298
Query: 164 RKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIK 223
VF E + +G+ P L++ + A+C+ +++A M+ L P+V TY+ LI
Sbjct: 299 YWVF-ETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKL-GVSPNVVTYNNLIH 356
Query: 224 ACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK 283
+ + M + V +T ++++ G K F++ VL LE
Sbjct: 357 GLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGF-T 415
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P+ NT++ + G + R + GI+P + T N +I + K ++ +
Sbjct: 416 PNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECI 475
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+E M F + +I + +M M+ + L+ G
Sbjct: 476 LEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCK 535
Query: 404 AGLFHKVISS-VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
G + RL K N+ NA+I K ++ E R+ K+M E+ D
Sbjct: 536 EGKHSDAVELWFRLLEK-GFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKI 594
Query: 463 TFSIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
T++ + KEG ++ + L E ++ +E
Sbjct: 595 TYNTLISGCCKEGKVEEGFKLRGEMVKQGIE 625
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 160/402 (39%), Gaps = 52/402 (12%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A+Q+F + E+ P TY L+ L K G + A + +MV++G+ T Y+ L+
Sbjct: 332 AIQLFFDM-EKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLI 390
Query: 187 AAYCRNSLIDEAFVTLNQMKTL-PNCQPDVYTYSTLIKACV------DAMRFELIETLYQ 239
+ +EA L + TL P+ Y+TLI DA+R
Sbjct: 391 NGLMKLEKFNEANSVLKE--TLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIR------G 442
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML---------------------- 277
DM + + PN+VT N ++ G+ K G +Q E +L ML
Sbjct: 443 DMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNS 502
Query: 278 --ESA----------TCKPDVWTMNTILSVFANKGQ-VDMMERWYEKFRNFGIDPETRTF 324
ESA +P+ + T++ +G+ D +E W+ G T
Sbjct: 503 RFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEK-GFGANLVTT 561
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
N LI K + +++ M + F TYN +I G + +M
Sbjct: 562 NALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK 621
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
+G++ DT T+ LI+G G + ++ + NV Y +I KAD + E
Sbjct: 622 QGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEE 681
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
E+++ + ++ +S ++ + AY + G + + L +
Sbjct: 682 GEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDD 723
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ + G+ E A+ + +EM +EG+ P YTAL+ YC+ +D+
Sbjct: 731 PTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNV 790
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L +M + + P+ TY+ +I + + L +M + + P+TVT N++ G+
Sbjct: 791 LQEMSSY-DIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFC 849
Query: 262 KAGMFDQ 268
K G ++
Sbjct: 850 KEGKIEE 856
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 126 QALQVFEMLKEQPFY--QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
Q +V +L+E Y P + TY ++ KSG + A K+ +EMV +GI P Y
Sbjct: 783 QMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYN 842
Query: 184 ALLAAYCRNSLIDEA 198
L +C+ I+E
Sbjct: 843 VLTNGFCKEGKIEEG 857
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 148/348 (42%), Gaps = 13/348 (3%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ + G + A KV M G EP Y L A C+ +DEAF
Sbjct: 272 PTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRL 331
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACV------DAMRFELIETLYQDMDERSVTPNTVTQNI 255
++M+ L PDV TY+TL AC DA+R L ++M E+ V VT NI
Sbjct: 332 KDEMERLGTLLPDVVTYNTLADACFKCRCSSDALR------LLEEMREKGVKATLVTHNI 385
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
V+ G K G + L+ M + PDV T NT++ G + ++
Sbjct: 386 VIKGLCKDGELEGALGCLNKMADDGLA-PDVITYNTLIHAHCKAGNIAKAYTLMDEMVRR 444
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G+ +T T N ++ K++ Y++ +++ + F +Y V+ A+ +++
Sbjct: 445 GLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPA 504
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
+++M + + T+ LI G + G + I + + + + + YN +I A
Sbjct: 505 LRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHA 564
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
K DL + + +M E +PD T + + G DK L
Sbjct: 565 YCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKL 612
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 129/338 (38%), Gaps = 38/338 (11%)
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
G+ P Y LL A+CR ++ EA L +MK P TY+TL+ A +
Sbjct: 234 GLSPDAVTYNTLLNAHCRKGMLGEARALLARMKK-DGVAPTRPTYNTLVSAYARLGWIKQ 292
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
+ + M P+ T N++ G +AG D+ R+ M T PDV T NT+
Sbjct: 293 ATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLA 352
Query: 294 -SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF 352
+ F + D + R E+ R G+ T NI+I K + + M
Sbjct: 353 DACFKCRCSSDAL-RLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGL 411
Query: 353 PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF------CC---------- 396
TYN +I A G+ ++M G+K DT T C
Sbjct: 412 APDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQG 471
Query: 397 LINGYANAGLFHKVIS----------------SVRLASKL---QIAENVSFYNAVISACI 437
L+ G +S ++RL ++ ++ ++S YN +I
Sbjct: 472 LLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLS 531
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ L E + EK PD T++I+ AY KEG
Sbjct: 532 RMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEG 569
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 7/196 (3%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P+ +T N ++ +KG + + FG+ P+ T+N L+ A+ +K M + ++
Sbjct: 202 PNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 261
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ M+K T TYN ++ A++ +G K E M A G + D T+ L G
Sbjct: 262 LARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQ 321
Query: 404 AGLFHKVISSVRLASKLQ----IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
AG KV + RL +++ + +V YN + AC K + R+ + M+EK +
Sbjct: 322 AG---KVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKA 378
Query: 460 DSETFSIMTEAYAKEG 475
T +I+ + K+G
Sbjct: 379 TLVTHNIVIKGLCKDG 394
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 125/297 (42%), Gaps = 16/297 (5%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
++ K++ ++ Q Q + P E +Y ++ K E A ++++EM+E+ + P
Sbjct: 459 NLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTP 518
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
+ Y L+ R + EA LN++ PD TY+ +I A E
Sbjct: 519 SISTYNTLIKGLSRMGRLKEAIDKLNELME-KGLVPDDTTYNIIIHAYCKEGDLENAFQF 577
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
+ M E S P+ VT N ++ G G D+ ++ +E K DV T NT++
Sbjct: 578 HNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGK-KVDVITYNTLIQTMC 636
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK-------KRMYDKMSSVMEYMRKL 350
G VD ++ G+ P+ T+N+++ A + + M K++ +
Sbjct: 637 KDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSF 696
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
P + +V EA S DAK E T E +A TK L+NG +G F
Sbjct: 697 SSPLLKPS--SVDEAESG-KDAKTEEETVENPQDSASEAYTK----LVNGLCTSGQF 746
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/250 (18%), Positives = 90/250 (36%), Gaps = 41/250 (16%)
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMER 307
P+T + L Y + + ++L + +P + N +LS A +
Sbjct: 129 PSTPLADAALSAYSRLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSP-QA 187
Query: 308 WYEKFRN---FGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ FR+ + P TFN+L+ + K + +
Sbjct: 188 SLDAFRSIVALRLHPNHYTFNLLVHTHCSK-------------------------GTLAD 222
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
A S T M G+ D T+ L+N + G+ + + + K +A
Sbjct: 223 ALS----------TLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAP 272
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL- 483
YN ++SA + + + +V + M PD T++++ + G D+ + L
Sbjct: 273 TRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLK 332
Query: 484 -EQEKLQMLL 492
E E+L LL
Sbjct: 333 DEMERLGTLL 342
>gi|242060656|ref|XP_002451617.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
gi|241931448|gb|EES04593.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
Length = 593
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 168/375 (44%), Gaps = 32/375 (8%)
Query: 110 TVAETFSDHVLKKQWFQ-ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
TV + D +LK + + A++V++ +K++ E TY ++ + GK+ QP + KVFN
Sbjct: 236 TVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTE-TYTLMINVYGKAKQPMSSLKVFN 294
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
EM G +P YTAL+ A+ R L ++A +M+ + +PDVY Y+ L++A A
Sbjct: 295 EMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGH-EPDVYAYNALMEAYSRA 353
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
+ ++ M+ P+ + NI++ YG+AG+ + E + + +P + +
Sbjct: 354 GLPQGASEIFSLMEHMGCEPDRASYNILVDAYGRAGLHQEAEAAFQELKQQGM-RPTMKS 412
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
+LS A G V E + G+ P+T N ++ AYG+ D M ++
Sbjct: 413 HMLLLSAHAKSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLL---- 468
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
ME + G DT T+ L+N Y AG
Sbjct: 469 ------------------------GAMERGGDDDAGGGAAPDTSTYNVLVNVYGRAGYLD 504
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
++ ++ R + +A +V + + I A + + +++ M + C PD+ T ++
Sbjct: 505 RMEAAFRALAARGLAADVVTWTSRIGAYARKKEYGRCLEIFEEMVDAGCYPDAGTAKVLL 564
Query: 469 EAYAKEGMNDKVYAL 483
A + E ++V A+
Sbjct: 565 AACSDERQVEQVTAI 579
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 147/326 (45%), Gaps = 12/326 (3%)
Query: 99 ERKAKAKAWVNTVAETFSDHVL--KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGK 156
+R K + NT T +V KQ +L+VF +K +P TY L+ +
Sbjct: 259 QRMKKERCRTNTETYTLMINVYGKAKQPMSSLKVFNEMKTIGC-KPNICTYTALVNAFAR 317
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
G E A +VF EM + G EP Y AL+ AY R L A + M+ + C+PD
Sbjct: 318 EGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHM-GCEPDRA 376
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
+Y+ L+ A A + E +Q++ ++ + P + ++L + K+G + E V++ +
Sbjct: 377 SYNILVDAYGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQL 436
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID-------PETRTFNILIG 329
+S +PD + +N +L+ + G++D MER G D P+T T+N+L+
Sbjct: 437 HKSGL-RPDTFALNAMLNAYGRAGRLDDMERLLGAMERGGDDDAGGGAAPDTSTYNVLVN 495
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
YG+ D+M + + T+ + I A++ + FE+M G
Sbjct: 496 VYGRAGYLDRMEAAFRALAARGLAADVVTWTSRIGAYARKKEYGRCLEIFEEMVDAGCYP 555
Query: 390 DTKTFCCLINGYANAGLFHKVISSVR 415
D T L+ ++ +V + VR
Sbjct: 556 DAGTAKVLLAACSDERQVEQVTAIVR 581
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/442 (20%), Positives = 174/442 (39%), Gaps = 45/442 (10%)
Query: 45 SVTSTNKHTSFSSESAVAAKKRLWK------EGEYPGVSETS--IPGYRSKRTPIKNLKK 96
V T S + A K R WK +G +P +S + I + K T + N+ +
Sbjct: 58 GVARTFDRKKISRKRGGAIKGRGWKYGSGFVDGVFPVLSPMAQDILEFVQKGTDVTNIWE 117
Query: 97 KLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGK 156
L++ +A + + L +QW + V E + + ++P Y L+ G+
Sbjct: 118 SLDKIPQAHDLWDDIVNVAVQLRLNRQWEPIITVCEWILYRSSFRPDIICYNLLIDAYGQ 177
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
Q + +Y ALL A+C P
Sbjct: 178 KRQ---------------LNKAESIYMALLEAHC---------------------VPTED 201
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
TY+ L++A ++ + E + +M + + P N L G KA ++ V M
Sbjct: 202 TYALLLRAYCNSGQLHRAEGVISEMQKNGLPPTATVYNAYLDGLLKARCSEKAVEVYQRM 261
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
+ C+ + T +++V+ Q + + + + G P T+ L+ A+ ++ +
Sbjct: 262 -KKERCRTNTETYTLMINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYTALVNAFAREGL 320
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
+K V E M++ YN ++EA+S G + F M G + D ++
Sbjct: 321 CEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNI 380
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
L++ Y AGL + ++ + + + + + ++SA K+ ++ E V ++ +
Sbjct: 381 LVDAYGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQLHKSG 440
Query: 457 CRPDSETFSIMTEAYAKEGMND 478
RPD+ + M AY + G D
Sbjct: 441 LRPDTFALNAMLNAYGRAGRLD 462
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 5/179 (2%)
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P+ +N+LI AYG+KR +K S+ + + T TY ++ A+ + G E
Sbjct: 163 PDIICYNLLIDAYGQKRQLNKAESIYMALLEAHCVPTEDTYALLLRAYCNSGQLHRAEGV 222
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
+M G+ + ++G A K + + K + N Y +I+ K
Sbjct: 223 ISEMQKNGLPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGK 282
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
A M +V+ MK C+P+ T++ + A+A+EG+ +K + +E ++ +GH
Sbjct: 283 AKQPMSSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEE-----MQQAGH 336
>gi|357140426|ref|XP_003571769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Brachypodium distachyon]
Length = 637
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 163/379 (43%), Gaps = 45/379 (11%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QA QVFE +K Q + P TY L+ + GK+GQ F+EMV G Y +
Sbjct: 239 QAYQVFEDMK-QKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEMVSRGCALNLIAYNTV 297
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYS-TLIKACVDAMRFELIETLYQDMDER 244
+ A +N ++D+ L++M +CQP+ +TYS TL + L E L D+ +R
Sbjct: 298 IEALGKNKMVDKVIFVLSKMIE-SDCQPNQFTYSLTLDILATEGQLHRLNEVL--DICDR 354
Query: 245 SVTPNT---VTQNIVLGGY-----------------GKAGMFDQMERVL--SG------- 275
+ + + +++ G+ G F M VL SG
Sbjct: 355 YLNKSIYSYLVKSLCKSGHASEAHNVFCRMWNSHESGDRDAFISMLEVLCNSGKTLEAID 414
Query: 276 ---MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
M+ D+ N + S QV + ++K + GI P+ T+NI+I +YG
Sbjct: 415 LLHMMPEKGIDTDIGMYNMVFSALGKLKQVSFISTLFDKMKASGIAPDLFTYNIMISSYG 474
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
+ + DK S + E M TYN +I GD F++M +G D
Sbjct: 475 RVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGDLDEAHILFKEMQEKGYDPDVF 534
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAE----NVSFYNAVISACIKADDLMEMERV 448
T+ LI + + +KV + L ++ IAE N+ YN ++ + E +
Sbjct: 535 TYSTLIECFGKS---NKVDMACSLFDEM-IAEGCIPNIVTYNILLDCLERRGKTAEAHKH 590
Query: 449 YKRMKEKHCRPDSETFSIM 467
Y+ MK++ PDS T+SI+
Sbjct: 591 YETMKQQGLTPDSITYSIL 609
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 146/356 (41%), Gaps = 34/356 (9%)
Query: 165 KVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
+V+ EM +G + Y LL A + ++D+A+ MK C PD YTY+ LI+
Sbjct: 207 EVYEEMHRKGYKLDIFAYNMLLDALAKAGMVDQAYQVFEDMKQ-KYCVPDAYTYTILIRM 265
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
+ + + +M R N + N V+ GK M D++ VLS M+ES C+P
Sbjct: 266 SGKTGQTYKFLSFFDEMVSRGCALNLIAYNTVIEALGKNKMVDKVIFVLSKMIES-DCQP 324
Query: 285 DVWTMNTILSVFANKGQV-------DMMERWYEK-FRNFGIDPETRT------FNILIGA 330
+ +T + L + A +GQ+ D+ +R+ K ++ + ++ N+
Sbjct: 325 NQFTYSLTLDILATEGQLHRLNEVLDICDRYLNKSIYSYLVKSLCKSGHASEAHNVFCRM 384
Query: 331 Y-----GKKRMYDKMSSVM-------------EYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
+ G + + M V+ M + YN V A +
Sbjct: 385 WNSHESGDRDAFISMLEVLCNSGKTLEAIDLLHMMPEKGIDTDIGMYNMVFSALGKLKQV 444
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAV 432
+ F++M A G+ D T+ +I+ Y GL K +V YN +
Sbjct: 445 SFISTLFDKMKASGIAPDLFTYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTL 504
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
I+ K DL E ++K M+EK PD T+S + E + K D +L E +
Sbjct: 505 INCLGKNGDLDEAHILFKEMQEKGYDPDVFTYSTLIECFGKSNKVDMACSLFDEMI 560
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 158/348 (45%), Gaps = 6/348 (1%)
Query: 129 QVFEMLKEQPF--YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+V ++++E +P TY +++LL KSG+ + A +V EM+ +GI P +YT L+
Sbjct: 28 KVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLI 87
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+C+ I A+ ++M+ PD Y+ +I + + ++ M R V
Sbjct: 88 DGFCKLGNIQAAYKLFDEMEK-QRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGV 146
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P+ VT ++ GY K+G ++ + + M++S P+V T + GQVD
Sbjct: 147 EPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGL-TPNVVTYTALADGLCKLGQVDTAN 205
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ G+ T+N L+ K + +ME M + T+ +++A+
Sbjct: 206 ELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAY 265
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G+ +M G++ TF L+NG+ +G+ + + I N
Sbjct: 266 CKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNT 325
Query: 427 SFYNAVISA-CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ YN+++ CI+ +++ +YK M + PDS T++I+ + + K
Sbjct: 326 TTYNSLMKQYCIR-NNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCK 372
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 169/387 (43%), Gaps = 16/387 (4%)
Query: 110 TVAETFSDHVLKKQWFQA-LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
V T D K QA ++F+ +++Q P Y ++ L + G+ A KVFN
Sbjct: 81 VVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIV-PDFIAYTAVICGLCRCGKMMEADKVFN 139
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
+M G+EP YT L+ YC++ +++AF NQM P+V TY+ L
Sbjct: 140 KMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQM-VQSGLTPNVVTYTALADGLCKL 198
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
+ + L +M + + N T N ++ G K+G Q +++ M E A PD T
Sbjct: 199 GQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEM-EVAGMYPDTIT 257
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
T++ + G++ + + G+ P TFN+L+ + M + ++ +M
Sbjct: 258 FTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWML 317
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG--- 405
+ ++TYN++++ + + + ++ M A G+ D+ T+ LI G+ A
Sbjct: 318 EKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMK 377
Query: 406 ---LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
HK +A K S YN++I K + E +++ M+ + D+E
Sbjct: 378 EAWFLHK-----EMAEK-GFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAE 431
Query: 463 TFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+++ + EG + L E ++
Sbjct: 432 IYNLFVDISYGEGNMETALELCDEAIE 458
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 133/316 (42%), Gaps = 2/316 (0%)
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
G+ + K+ EM +G++P Y +++ C++ +D+A L +M PD
Sbjct: 23 GGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMIN-QGIVPDTV 81
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
Y+TLI + L+ +M+++ + P+ + V+ G + G + ++V + M
Sbjct: 82 VYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKM 141
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
+PD T T++ + G+++ + + G+ P T+ L K
Sbjct: 142 FSRGV-EPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQ 200
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
D + ++ M TYN+++ G+ + E+M GM DT TF
Sbjct: 201 VDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTT 260
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
L++ Y G K +R + V +N +++ + L + ER+ M EK
Sbjct: 261 LMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKG 320
Query: 457 CRPDSETFSIMTEAYA 472
P++ T++ + + Y
Sbjct: 321 IMPNTTTYNSLMKQYC 336
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/316 (18%), Positives = 142/316 (44%), Gaps = 28/316 (8%)
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
G P Y+ ++ YC + + + +M+ + +P++YTY+++I + + +
Sbjct: 5 GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQ-MKGLKPNLYTYNSIILLLCKSGKVDD 63
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------MFDQME--RVLSGMLESATCKP 284
E + ++M + + P+TV ++ G+ K G +FD+ME R++ P
Sbjct: 64 AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIV----------P 113
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
D ++ G++ ++ + K + G++P+ T+ LI Y K +K S+
Sbjct: 114 DFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLH 173
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
M + TY + + +G +M +G++ + T+ L+NG +
Sbjct: 174 NQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKS 233
Query: 405 GLFHKVISSVRLASKLQIA----ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
G + +V+L ++++A + ++F + + C K ++++ + + M ++ +P
Sbjct: 234 G---NIRQAVKLMEEMEVAGMYPDTITFTTLMDAYC-KTGEMVKAHELLREMLDRGLQPT 289
Query: 461 SETFSIMTEAYAKEGM 476
TF+++ + GM
Sbjct: 290 VITFNVLMNGFCMSGM 305
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 122/290 (42%), Gaps = 36/290 (12%)
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M R P+ V+ + V+ GY G ++ +++ M + KP+++T N+I+ + G
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEM-QMKGLKPNLYTYNSIILLLCKSG 59
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+VD ER + N GI P+T + LI + K + + M K + Y
Sbjct: 60 KVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYT 119
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK----------- 409
VI G + F +M + G++ D T+ LI+GY +G K
Sbjct: 120 AVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQS 179
Query: 410 -----VISSVRLASKL-------------------QIAENVSFYNAVISACIKADDLMEM 445
V++ LA L + N+ YN++++ K+ ++ +
Sbjct: 180 GLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQA 239
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
++ + M+ PD+ TF+ + +AY K G K + L +E L L+ +
Sbjct: 240 VKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPT 289
>gi|356540373|ref|XP_003538664.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 881
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 157/348 (45%), Gaps = 4/348 (1%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y+PK Y LL K G LA V EM + GI + E Y L Y +++ +
Sbjct: 150 YKPKLNLYHSLLRGFLKKGLLGLANGVLKEMDDLGIWRSKETYQIFLDYYVGAGRLEDTW 209
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVD-AMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
T+N+MK + + YS ++ D M + IE L +++ ER ++ +T N ++
Sbjct: 210 STINEMKQ-KGFPLNSFMYSKVVGIYRDNGMWKKAIEVL-EEIRERGISLDTHICNSIID 267
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
+GK G D+ ++ M + +P++ T N+++ +G + + G+
Sbjct: 268 TFGKYGELDEALKLFKKMQKEGV-RPNIVTWNSLIKWHCKEGDFMKAFHLFTDMQEQGLY 326
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P+ + F +I G++ +D + E M+ + Y +++ + G ++
Sbjct: 327 PDPKIFVTIISCLGEQGKWDIIKKYFESMKIRGNKEYGAVYAVLVDIYGQYGKFQNAGEC 386
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
+ + +EG+ FC L N YA GL +VI +++ I N+ N +I+A
Sbjct: 387 VQALKSEGVLVSPSIFCVLANAYAQQGLCEQVIMVLQIMEAEGIEPNIVMLNMLINAFGN 446
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
A ME VY +KE PD T++ + +A+ + D+V + +E
Sbjct: 447 AGRYMEAISVYHHIKESGVSPDVVTYTTLMKAFIRAKKFDEVPIIYKE 494
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 110/263 (41%), Gaps = 3/263 (1%)
Query: 219 STLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
S LI C + +L M+ + ++ + ++ G G + + + M+
Sbjct: 88 SQLICECCKEGDLDRAMSLLSQMEAKGFHLSSTSYACLIEALGNVGRTSEADMLFKEMVC 147
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY-GKKRMY 337
KP + +++L F KG + + ++ + GI T+ I + Y G R+
Sbjct: 148 YGY-KPKLNLYHSLLRGFLKKGLLGLANGVLKEMDDLGIWRSKETYQIFLDYYVGAGRLE 206
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
D S++ E M++ FP S Y+ V+ + D G K E++ G+ DT +
Sbjct: 207 DTWSTINE-MKQKGFPLNSFMYSKVVGIYRDNGMWKKAIEVLEEIRERGISLDTHICNSI 265
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
I+ + G + + + K + N+ +N++I K D M+ ++ M+E+
Sbjct: 266 IDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKAFHLFTDMQEQGL 325
Query: 458 RPDSETFSIMTEAYAKEGMNDKV 480
PD + F + ++G D +
Sbjct: 326 YPDPKIFVTIISCLGEQGKWDII 348
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 100/222 (45%), Gaps = 1/222 (0%)
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G D+ +LS M E+ + ++ N G+ + +++ +G P+
Sbjct: 96 KEGDLDRAMSLLSQM-EAKGFHLSSTSYACLIEALGNVGRTSEADMLFKEMVCYGYKPKL 154
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
++ L+ + KK + + V++ M L + TY ++ + G + T +
Sbjct: 155 NLYHSLLRGFLKKGLLGLANGVLKEMDDLGIWRSKETYQIFLDYYVGAGRLEDTWSTINE 214
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M +G ++ + ++ Y + G++ K I + + I+ + N++I K +
Sbjct: 215 MKQKGFPLNSFMYSKVVGIYRDNGMWKKAIEVLEEIRERGISLDTHICNSIIDTFGKYGE 274
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
L E +++K+M+++ RP+ T++ + + + KEG K + L
Sbjct: 275 LDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKAFHL 316
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 64/160 (40%)
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
LI K+ D+ S++ M F +S++Y +IEA ++G + F++M G
Sbjct: 90 LICECCKEGDLDRAMSLLSQMEAKGFHLSSTSYACLIEALGNVGRTSEADMLFKEMVCYG 149
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
K + L+ G+ GL ++ L I + Y + + A L +
Sbjct: 150 YKPKLNLYHSLLRGFLKKGLLGLANGVLKEMDDLGIWRSKETYQIFLDYYVGAGRLEDTW 209
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
MK+K +S +S + Y GM K + +E
Sbjct: 210 STINEMKQKGFPLNSFMYSKVVGIYRDNGMWKKAIEVLEE 249
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 167/386 (43%), Gaps = 11/386 (2%)
Query: 108 VNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
+ T++ + + +Q+ AL +F+ + +P Y ++ L + AR+V
Sbjct: 180 IRTLSGVLNGLIRIRQFRMALHLFDEIVSSGL-RPDVYVYTAVVRSLCELKDFIRAREVI 238
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
M G + + Y + C+N + EA V + + + + DV TY TL+
Sbjct: 239 GRMESSGCDLSVATYNVFIRGLCKNQRVWEA-VEIKNLLSYKGLRADVGTYCTLVLGLCK 297
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG----MFDQMERVLSGMLESATCK 283
FE E + +M E P+ + ++ G K G FD + +V +
Sbjct: 298 VEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKV-----KKFGVA 352
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P ++ N +++ G++D E + + G+ P T++ILI ++ K+ D
Sbjct: 353 PSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHF 412
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ M ++ T Y+++I +G + + F++M A G+K + + LI+GY
Sbjct: 413 LGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCK 472
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
G H + I+ N + A+IS A+ + E +++ M E + P+ T
Sbjct: 473 EGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVT 532
Query: 464 FSIMTEAYAKEGMNDKVYALEQEKLQ 489
++++ E + KEG + + L E ++
Sbjct: 533 YNVLIEGHCKEGNTVRAFELLDEMVE 558
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 142/334 (42%), Gaps = 2/334 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P Y L+ + K G+ + A +FN M +G+ P Y+ L+ ++C+ +D A
Sbjct: 353 PSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHF 412
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L +M T + VY YS+LI + ++L+ +M + PN V ++ GY
Sbjct: 413 LGKM-TEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYC 471
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G R+ M P+ +T ++S + ++ + + + + + P
Sbjct: 472 KEGELHNAFRLYHEMTGKGI-SPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNE 530
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+N+LI + K+ + +++ M + + TY +I G
Sbjct: 531 VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMND 590
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
+ E K + F L++GY G + + R +A ++ Y+ +I ++ D
Sbjct: 591 LQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQD 650
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + K+M ++ RPD+ ++ M +A AK G
Sbjct: 651 RRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAG 684
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 141/334 (42%), Gaps = 39/334 (11%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
K G+ A+ +F+EM+ G++P +YT+L++ YC+ + AF ++M T P+
Sbjct: 437 KLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEM-TGKGISPNT 495
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
YT++ LI A R L+ +M E +V PN VT N+++ G+ K G + +L
Sbjct: 496 YTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDE 555
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK- 334
M+E PD +T ++S + G+V + + F+ L+ Y K+
Sbjct: 556 MVEKGLV-PDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEG 614
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
R+ D + + E + + Y+ +I D + + +QMH +G++ D
Sbjct: 615 RLDDALDACREMLGR-GVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPD---- 669
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
NV Y +I A KA +L ++ M
Sbjct: 670 ------------------------------NV-LYTTMIDANAKAGNLKMAFGLWDIMVS 698
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
+ C P+ T++ + K G+ DK L +E L
Sbjct: 699 EGCLPNVVTYTALINGLCKIGLMDKAELLCREML 732
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 108/238 (45%), Gaps = 5/238 (2%)
Query: 130 VFEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
+ ++LK+ +P Y ++ K+G ++A +++ MV EG P YTAL+
Sbjct: 654 IIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALIN 713
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVT 247
C+ L+D+A + +M N P+ TY+ + E L+ + E
Sbjct: 714 GLCKIGLMDKAELLCREMLA-SNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFL 771
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMER 307
NTVT NI++ G+ K G + VL M++S PD + +TI+ + +G + +
Sbjct: 772 ANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGI-SPDCISYSTIIYEYCRRGDLKEAIK 830
Query: 308 WYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+E N G++P+T +N LI K + + M + +TYN++I
Sbjct: 831 LWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 888
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 134/344 (38%), Gaps = 38/344 (11%)
Query: 126 QALQVFEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
++ FE+L E + P TY L+ L +G+ AR+ N++ E + ++
Sbjct: 545 NTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFS 604
Query: 184 ALLAAYCRNSLIDEAFVTLNQM-------------------------KTLPNC------- 211
ALL YC+ +D+A +M +++ +
Sbjct: 605 ALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQ 664
Query: 212 --QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+PD Y+T+I A A ++ L+ M PN VT ++ G K G+ D+
Sbjct: 665 GLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKA 724
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
E + ML S + P+ T L ++G ++ + ++ G T T+NILI
Sbjct: 725 ELLCREMLASNS-LPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIR 782
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+ K + + V+ M +Y+ +I + GD K +E M G+
Sbjct: 783 GFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNP 842
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
DT + LI G G K + + N + YN++I
Sbjct: 843 DTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLI 886
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 3/134 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+Q+ ++L E + TY L+ K G+ + A +V M++ GI P Y+ +
Sbjct: 758 KAIQLHDVLLEG--FLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTI 815
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ YCR + EA M PD Y+ LI C L DM R
Sbjct: 816 IYEYCRRGDLKEAIKLWESMLN-RGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRG 874
Query: 246 VTPNTVTQNIVLGG 259
V PN T N ++ G
Sbjct: 875 VKPNRATYNSLIHG 888
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 167/386 (43%), Gaps = 11/386 (2%)
Query: 108 VNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
+ T++ + + +Q+ AL +F+ + +P Y ++ L + AR+V
Sbjct: 180 IRTLSGVLNGLIRIRQFRMALHLFDEIVSSGL-RPDVYVYTAVVRSLCELKDFIRAREVI 238
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
M G + + Y + C+N + EA V + + + + DV TY TL+
Sbjct: 239 GRMESSGCDLSVATYNVFIRGLCKNQRVWEA-VEIKNLLSYKGLRADVGTYCTLVLGLCK 297
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG----MFDQMERVLSGMLESATCK 283
FE E + +M E P+ + ++ G K G FD + +V +
Sbjct: 298 VEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKV-----KKFGVA 352
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P ++ N +++ G++D E + + G+ P T++ILI ++ K+ D
Sbjct: 353 PSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHF 412
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ M ++ T Y+++I +G + + F++M A G+K + + LI+GY
Sbjct: 413 LGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCK 472
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
G H + I+ N + A+IS A+ + E +++ M E + P+ T
Sbjct: 473 EGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVT 532
Query: 464 FSIMTEAYAKEGMNDKVYALEQEKLQ 489
++++ E + KEG + + L E ++
Sbjct: 533 YNVLIEGHCKEGNTVRAFELLDEMVE 558
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 136/320 (42%), Gaps = 30/320 (9%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
K G+ A+ +F+EM+ G++P +YT+L++ YC+ + AF ++M T P+
Sbjct: 437 KLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEM-TGKGISPNT 495
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
YT++ LI A R L+ +M E +V PN VT N+++ G+ K G + +L
Sbjct: 496 YTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDE 555
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
M+E PD +T ++S + G+V E R F + G+++
Sbjct: 556 MVEKGLV-PDTYTYRPLISGLCSTGRVS----------------EAREF--MNDLQGEQQ 596
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
+++ + + TY +I +G E +M A + T+
Sbjct: 597 KLNEIEGCLPNV---------VTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYA 647
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
C ++ + G K I + + +A V+ YN +I K + E V M +
Sbjct: 648 CFLDYLTSEGNIEKAIQLHDVLLEGFLANTVT-YNILIRGFCKLGRIQEAAEVLVNMIDS 706
Query: 456 HCRPDSETFSIMTEAYAKEG 475
PD ++S + Y + G
Sbjct: 707 GISPDCISYSTIIYEYCRRG 726
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 162/403 (40%), Gaps = 66/403 (16%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
++ W +A+++ +L + + GTY L++ L K + E ++ NEM+E G P+
Sbjct: 264 QRVW-EAVEIKNLLSYKGL-RADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEA 321
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
+ L+ + I AF +N++K P ++ Y+ LI + + + E+L+ +
Sbjct: 322 AVSNLVDGLRKKGNIGSAFDLVNKVKKF-GVAPSLFVYNALINSMCKDGKLDEAESLFNN 380
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE--------------SATCK--- 283
M + + PN VT +I++ + K G D L M E S CK
Sbjct: 381 MGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGK 440
Query: 284 -----------------PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
P+V +++S + +G++ R Y + GI P T TF
Sbjct: 441 LRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTA 500
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
LI + + + M + TYN +IE G+ ++M +G
Sbjct: 501 LISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKG 560
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+ DT T+ LI+G + G +++E F N +++
Sbjct: 561 LVPDTYTYRPLISGLCSTG---------------RVSEAREFMN-------------DLQ 592
Query: 447 RVYKRMKE-KHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
+++ E + C P+ T++ + K G+ DK L +E L
Sbjct: 593 GEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREML 635
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 106/265 (40%), Gaps = 42/265 (15%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E TY L+ K G A ++ +EMVE+G+ P Y L++ C + EA
Sbjct: 528 PNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREF 587
Query: 202 LNQMKT-------LPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP------ 248
+N ++ + C P+V TY+ LI + E L ++M + P
Sbjct: 588 MNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYA 647
Query: 249 ----------------------------NTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
NTVT NI++ G+ K G + VL M++S
Sbjct: 648 CFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSG 707
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
PD + +TI+ + +G + + +E N G++P+T +N LI K
Sbjct: 708 I-SPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKA 766
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEA 365
+ + M + +TYN++I
Sbjct: 767 FELRDDMMRRGVKPNRATYNSLIHG 791
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 154/339 (45%), Gaps = 8/339 (2%)
Query: 140 YQPKEGTYMKLL---VLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLID 196
Y+P T+ LL L+ + G A + MV+ G EP +Y L+ C+N ++
Sbjct: 137 YEPSIVTFGSLLHGFCLVNRIGD---AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELN 193
Query: 197 EAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIV 256
A LN+M+ DV TY+TL+ + R+ + +DM +RS+ P+ VT +
Sbjct: 194 IALELLNEMEK-KGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTAL 252
Query: 257 LGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG 316
+ + K G D+ + + M++S+ P+ T N+I++ G++ ++ ++ + G
Sbjct: 253 IDVFVKQGNLDEAQELYKEMIQSSV-DPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG 311
Query: 317 IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME 376
P T+N LI + K RM D+ + + M F TYN +I + +G +
Sbjct: 312 CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVAL 371
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
F M + + D T C L++G G + + + + YN +I
Sbjct: 372 DIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGL 431
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
KAD + + ++ R+ + +PD+ T++IM K G
Sbjct: 432 CKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 102/451 (22%), Positives = 187/451 (41%), Gaps = 19/451 (4%)
Query: 47 TSTNKHTSFSSESAVAAKKR--LWKEGEYPGVSETSIPGYRSKRTPI----KNLKKKLER 100
+S+NK S S K W + P +S+ G+ + + N + L R
Sbjct: 502 SSSNKEISLSLREIWERSKSNPFWMQRLIPIAFSSSVKGFVRRHYLLLERGNNPETSLSR 561
Query: 101 KAKAKAWVNTVAETFSDHVLKKQWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQ 159
+ + E + + ++ A +F EML+ +P P + ++L ++ K +
Sbjct: 562 SFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPI--PSIVDFTRVLTVIAKMNK 619
Query: 160 PELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYS 219
++ ++++M GI +T L+ +CR S + A L +M L +P + T
Sbjct: 620 FDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKL-GFRPSIVTLG 678
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
+L+ RF+ +L MD PN V N V+ G K + V M E
Sbjct: 679 SLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCM-EK 737
Query: 280 ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK-RMYD 338
+ D T NT++S +N G+ R IDP F LI + K+ + +
Sbjct: 738 KGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE 797
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+ E +R+ P TYN++I F G +Y F+ M ++G D T+ LI
Sbjct: 798 ARNLYKEMIRRSVVP-NVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLI 856
Query: 399 NGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
G+ + +V ++L ++ + + YN +I +A L ++V+ RM +
Sbjct: 857 TGFCKS---KRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC 913
Query: 456 HCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
PD T++I+ + G +K + ++
Sbjct: 914 GVSPDIVTYNILLDCLCNNGKIEKALVMVED 944
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 146/338 (43%), Gaps = 4/338 (1%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
++P T LL + + + A + + M G P +Y ++ C+N ++ A
Sbjct: 670 FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL 729
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
M+ + D TY+TLI ++ R+ L +DM +R + PN + ++
Sbjct: 730 EVFYCMEK-KGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 788
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ K G + + M+ + P+V+T N++++ F G + + ++ + G P
Sbjct: 789 FVKEGNLLEARNLYKEMIRRSVV-PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP 847
Query: 320 ETRTFNILIGAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
+ T+N LI + K KR+ D M E M + TYN +I + G +
Sbjct: 848 DVVTYNTLITGFCKSKRVEDGMKLFCE-MTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 906
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
F +M G+ D T+ L++ N G K + V K ++ ++ YN +I +
Sbjct: 907 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 966
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
D L E +++ + K +PD+ + M ++G+
Sbjct: 967 TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 1004
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 132/282 (46%), Gaps = 5/282 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
AL+VF ++++ + TY L+ L SG+ A ++ +MV+ I+P +TAL
Sbjct: 727 NALEVFYCMEKKGI-RADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTAL 785
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDER 244
+ + + + EA +M + P+V+TY++LI C+ + + ++ M +
Sbjct: 786 IDTFVKEGNLLEARNLYKEM-IRRSVVPNVFTYNSLINGFCIHGCLGD-AKYMFDLMVSK 843
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
P+ VT N ++ G+ K+ + ++ M D +T NT++ + G++++
Sbjct: 844 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV-GDAFTYNTLIHGYCQAGKLNV 902
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
++ + + + G+ P+ T+NIL+ +K ++E ++K + TYN +I+
Sbjct: 903 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQ 962
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
K F + +G+K D + +I+G GL
Sbjct: 963 GLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 1004
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 155/402 (38%), Gaps = 45/402 (11%)
Query: 75 GVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVF-EM 133
G++ ++ G+R P NL L A A+A+ + + + + ++ A +F EM
Sbjct: 8 GIATSTAKGFRRVVNP--NL---LGGGAAARAFSDYREKLRTGFLHSIRFEDAFALFFEM 62
Query: 134 LKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNS 193
+ QP P + +LL + E +M GI +T L+ +CR S
Sbjct: 63 VHSQPL--PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCS 120
Query: 194 LIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQ 253
+ A L +M L +P + T+ +L+ R +L M + PN V
Sbjct: 121 RLSFALSVLGKMMKLGY-EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVY 179
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
N ++ G K G + +L+ M E DV T NT+L+ G+ R
Sbjct: 180 NTLIDGLCKNGELNIALELLNEM-EKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
I+P+ TF LI + K+ D+ + + M + + TYN++I G
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLY 298
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
+ TF+ M A+ G F V++ YN +I
Sbjct: 299 DAKKTFDLM-------------------ASKGCFPNVVT----------------YNTLI 323
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
S K + E ++++RM + D T++ + Y + G
Sbjct: 324 SGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 30/212 (14%)
Query: 132 EMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
E+ KE Q P TY ++ L G+ A+K F+ M +G P Y L++ +
Sbjct: 267 ELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
C+ ++DE + L Q + D++TY+TLI + + ++ M R VTP+
Sbjct: 327 CKFRMVDEG-MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD----------VWTMNTILSVFANK 299
+T I+L G ++G +ESA K D + N ++
Sbjct: 386 IITHCILLHGL-----------CVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLC-- 432
Query: 300 GQVDMMERWYEKFRNF---GIDPETRTFNILI 328
+ D +E+ +E F G+ P+ RT+ I+I
Sbjct: 433 -KADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 111/266 (41%), Gaps = 28/266 (10%)
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMF-DQMERVLSGMLESATCK---------------PDV 286
R V PN +LGG A F D E++ +G L S + P +
Sbjct: 18 RRVVNPN------LLGGGAAARAFSDYREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSI 71
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
+L+ AN + + + + +K +GI + +F ILI + + SV+
Sbjct: 72 VDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGK 131
Query: 347 MRKLQFPWTSSTYNNVIEAF---SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
M KL + + T+ +++ F + +GDA + M G + + + LI+G
Sbjct: 132 MMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVIL---MVKSGYEPNVVVYNTLIDGLCK 188
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
G + + + K + +V YN +++ + + R+ + M ++ PD T
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 464 FSIMTEAYAKEGMNDKVYALEQEKLQ 489
F+ + + + K+G D+ L +E +Q
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQ 274
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/274 (17%), Positives = 100/274 (36%), Gaps = 1/274 (0%)
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
P + ++ L+ A + R+E + Q M+ ++ + + I++ + + V
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
L M++ +P + T ++L F ++ G +P +N LI
Sbjct: 129 LGKMMKLGY-EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLC 187
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K + ++ M K TYN ++ G M + D
Sbjct: 188 KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVV 247
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
TF LI+ + G + + + + N YN++I+ L + ++ + M
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLM 307
Query: 453 KEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
K C P+ T++ + + K M D+ L Q
Sbjct: 308 ASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 732
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 175/427 (40%), Gaps = 53/427 (12%)
Query: 83 GYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQP 142
G R P+ +LK L R+AK + D W +AL V + ++EQ +P
Sbjct: 143 GGRQAGMPMSHLKATL-REAK----------QYGD------WRKALDVLDRMQEQGV-KP 184
Query: 143 KEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTL 202
Y + G + Q E A ++ M G P Y++ +AA + S EA L
Sbjct: 185 DSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSAIAACAKVSRWKEAVGLL 244
Query: 203 NQMK---TLPN----------CQ---------------------PDVYTYSTLIKACVDA 228
MK PN C+ PDV TYST+I AC
Sbjct: 245 RSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKR 304
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
++E L +M + V N +T +IV+G K G +++ +L M E+ PDV T
Sbjct: 305 GQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGV-APDVIT 363
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
++ +S A KGQ + + G+ P ++ I+I A K+ + + +++ M+
Sbjct: 364 YSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQ 423
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
P Y+ I+A + + + +M A G+ + ++ I+ A G
Sbjct: 424 AHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSK 483
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ +R +A +V Y+AVI++C E +++ M+ + PD + +
Sbjct: 484 IAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAI 543
Query: 469 EAYAKEG 475
A A+ G
Sbjct: 544 NACAQGG 550
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 148/348 (42%), Gaps = 3/348 (0%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
QW +A+ + ++E P TY + K GQ E A + EM EG+ P Y
Sbjct: 341 QWEEAVALLREMQENGV-APDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISY 399
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
+++A + EA L +M+ PDV YS I AC A R+E L ++M
Sbjct: 400 GIVISACAKRGRWREAIDLLQEMQAH-GVPPDVINYSAAIDACAQASRWEQALWLLREMP 458
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
+TPN ++ N + K G +L M + PDV T + +++ A Q
Sbjct: 459 ATGLTPNVISYNSAIDACAKTGRSKIAVELLREM-PAHGLAPDVITYSAVIASCAMGRQW 517
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ + + + GI P+ + N I A + +++ V+ M + + +Y
Sbjct: 518 EEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTA 577
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I+A + K + +M G+ D ++ ++ + GL+ + + +R + +
Sbjct: 578 IDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGL 637
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
+ +V YN+ I+AC K E + ++M PD +F+ +A
Sbjct: 638 SPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDA 685
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 145/324 (44%), Gaps = 2/324 (0%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A V + M E+G++P + Y++ +AA C N+ E V L PDV TYS+ I
Sbjct: 170 ALDVLDRMQEQGVKPDSQNYSSAIAA-CGNARQWERAVELLASMAARGTPPDVLTYSSAI 228
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
AC R++ L + M + V PN + + + K G ++ +L M +
Sbjct: 229 AACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEM-PAVGL 287
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
PDV T +T++ A +GQ + R + G+ T++I+IGA K +++ +
Sbjct: 288 APDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVA 347
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
++ M++ TY++ I A + G + +M EG+ + ++ +I+ A
Sbjct: 348 LLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACA 407
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
G + + I ++ + +V Y+A I AC +A + + + M P+
Sbjct: 408 KRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVI 467
Query: 463 TFSIMTEAYAKEGMNDKVYALEQE 486
+++ +A AK G + L +E
Sbjct: 468 SYNSAIDACAKTGRSKIAVELLRE 491
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 59/155 (38%), Gaps = 3/155 (1%)
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE---QMHAEGMKADT 391
+ Y ++ + ++Q N A + G+A+ E E M A G D
Sbjct: 162 KQYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDV 221
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
T+ I A + + + +R + NV Y+A ISAC K + K
Sbjct: 222 LTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKE 281
Query: 452 MKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
M PD T+S + +A AK G + + L E
Sbjct: 282 MPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLME 316
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 150/335 (44%), Gaps = 2/335 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY L+ G + A K+ +EM+ G++P Y ++ C+ ++D AF
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFE 284
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ ++ L +PDV +Y+ L++A ++ ++E E L M PN VT +I++
Sbjct: 285 MVRNLE-LKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ G ++ +L M E PD ++ + +++ F +G++D+ + E + G P+
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGL-TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 402
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+N ++ K D+ + + ++ SS+YN + A GD +
Sbjct: 403 IVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL 462
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M + G+ D T+ +I+ G+ + + + +V YN V+ KA
Sbjct: 463 EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 522
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + V + M CRP+ T++++ E G
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 557
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 142/332 (42%), Gaps = 11/332 (3%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
+SG + + MV +G P L T L+ + I +A + ++ QPDV
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG--QPDV 158
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
+ Y+ LI R + + M + +P+TVT NI++G G D +VL+
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
+L S C+P V T ++ +G VD + ++ + G+ P+ T+N +I K+
Sbjct: 219 LL-SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 336 MYDKMSSVMEYMRKLQFPWTSS---TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
M D+ E +R L+ + +YN ++ A + G + E +M +E +
Sbjct: 278 MVDR---AFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
T+ LI G + ++ ++L + + + Y+ +I+A + L + M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 453 KEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
C PD ++ + K G D+ ALE
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQ--ALE 424
>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
Length = 472
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 136/312 (43%), Gaps = 15/312 (4%)
Query: 108 VNTVAETFSDHVLKKQWF------QALQVFEMLKEQ-PFYQPKEGTYMKLLVLLGKSGQP 160
+ V + FS ++L K QA + M+ E P Y ++ K G
Sbjct: 142 LGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDV 201
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM---KTLPNCQPDVYT 217
A +F EMV+ GI P Y +++ A C+ +D+A L QM + LPN +T
Sbjct: 202 NKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN----NWT 257
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y+ LI +++ ++++M S+ P+ VT ++++G K G + V M
Sbjct: 258 YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMA 317
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
PDV++ N +L+ +A KG + M ++ GI P+ TFN+ I AY M
Sbjct: 318 MKGQ-NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGML 376
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
DK + MR TY VI A +G F QM +G+ D + CL
Sbjct: 377 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 436
Query: 398 INGYANAGLFHK 409
I G+ G+ K
Sbjct: 437 IQGFCTHGILLK 448
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 139/346 (40%), Gaps = 36/346 (10%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ ++ +PELA F +++ G+ + + LL +C DEA
Sbjct: 75 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 134
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L C PDV++Y+ L+K+ L G
Sbjct: 135 LLHRTPELGCVPDVFSYNILLKS--------------------------------LCNQG 162
Query: 262 KAGMFDQMERVLSGMLESAT-CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K+G D + R+ M E T C PDV NT++ F +G V+ +++ GI P+
Sbjct: 163 KSGQADNLLRM---MAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPD 219
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+N ++ A K R DK + + M + + TYNN+I +S G K F+
Sbjct: 220 LVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFK 279
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M + D T L+ G + + +V YN +++
Sbjct: 280 EMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKG 339
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
L++M ++ M PD TF++ +AYA GM DK + E
Sbjct: 340 CLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNE 385
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 136/334 (40%), Gaps = 13/334 (3%)
Query: 111 VAETFSDHVLK-----KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARK 165
V + H+LK K+ +AL + + P +Y LL L G+ A
Sbjct: 110 VDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADN 169
Query: 166 VFNEMVEEGIEPTPEL--YTALLAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTL 221
+ M E G +P++ Y ++ + + +++A +M + +P PD+ TY+++
Sbjct: 170 LLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIP---PDLVTYNSV 226
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
+ A A + E + M + V PN T N ++ GY G + + RV M +
Sbjct: 227 VHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 286
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
PDV T++ ++ G++ ++ G +P+ ++NI++ Y K M+
Sbjct: 287 L-PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT 345
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+ + M T+N I+A+++ G F +M G+K D T+ +I
Sbjct: 346 DLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 405
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
G + +A + YN +I
Sbjct: 406 CRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQG 439
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 150/372 (40%), Gaps = 43/372 (11%)
Query: 114 TFSDHVLKKQWFQALQVFEMLKEQPF--YQPKEGTYMKLLVLLGKSGQPELARKVFNEMV 171
T D K Q + E+LK+ F + P TY L+ L G E A ++FNE
Sbjct: 320 TIIDGYCKSGMLQ--EATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQ 377
Query: 172 EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRF 231
+ ++P +Y +L+ CR LI A +N+M C PD++TY+ +I
Sbjct: 378 AKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVE-EGCHPDIWTYNIIINGLCKMGNI 436
Query: 232 ELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNT 291
+ D + P+ T N ++ GY K D +++ M PDV T N+
Sbjct: 437 SDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGI-APDVITYNS 495
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
+L+ G+ + +E+ G P T+NILI + K ++ S V+ M +
Sbjct: 496 VLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDG 555
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
+ ++N +I F GD F+++ +G A TF LI Y+
Sbjct: 556 LVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYS--------- 606
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEM-ERVYKRMKEKHCRPDSETFSIMTEA 470
SKL M+M E+++ M K +PD T+ I+ +
Sbjct: 607 ------SKLN---------------------MQMAEKIFGEMISKGYKPDLYTYRILVDG 639
Query: 471 YAKEGMNDKVYA 482
K D+ YA
Sbjct: 640 LCKAANVDRAYA 651
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 134/348 (38%), Gaps = 37/348 (10%)
Query: 139 FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA 198
+ P TY L+ L K + + A + M+ +G P Y ++ YC++ ++ EA
Sbjct: 275 YVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEA 334
Query: 199 FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
L PD TY +LI E L+ + + + P+ V N ++
Sbjct: 335 TELLKD-AVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVK 393
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
G + G+ +V++ M+E C PD+WT N I++ G + G
Sbjct: 394 GLCRQGLILHALQVMNEMVEEG-CHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYL 452
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P+ TFN LI Y K+ D ++E M TYN+V+ G AK + T
Sbjct: 453 PDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNET 512
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
FE+M +G + + T YN +I K
Sbjct: 513 FEEMILKGCRPNAIT-----------------------------------YNILIENFCK 537
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ L E V RM + PD+ +F+ + + + G D Y L Q+
Sbjct: 538 INQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQK 585
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 169/389 (43%), Gaps = 18/389 (4%)
Query: 91 IKNLKKKLERKAKAK-AWVNTVAETFSDHVLKKQWFQALQVF-EMLKEQPFYQPKEGTYM 148
++ L+ ER AK A TV H + A +F EML F P T+
Sbjct: 161 LRLLRSLSERGCDAKPAAYCTVVRGLYAH---GHGYNARHLFDEMLGRDVF--PDVATFN 215
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
+L L + G + + ++++ G+ + C + ++EA + +M
Sbjct: 216 NVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY 275
Query: 209 PNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFD 267
PDV TY+TL++ C D+ E + L + M++ + P+ T N ++ GY K+GM
Sbjct: 276 --VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCI-PDDFTYNTIIDGYCKSGMLQ 332
Query: 268 QMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
+ +L + PD T ++++ +G ++ + + + + P+ +N L
Sbjct: 333 EATELLKDAVFKGFV-PDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSL 391
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
+ ++ + VM M + TYN +I MG+ +G
Sbjct: 392 VKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGY 451
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKL---QIAENVSFYNAVISACIKADDLME 444
D TF LI+GY K+ S+++L ++ IA +V YN+V++ KA E
Sbjct: 452 LPDVFTFNTLIDGYCKR---LKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKE 508
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ ++ M K CRP++ T++I+ E + K
Sbjct: 509 VNETFEEMILKGCRPNAITYNILIENFCK 537
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 136/353 (38%), Gaps = 23/353 (6%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P Y ++ L + + A KV+ M+ G+ P +T L ++C L V
Sbjct: 104 PAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFC---LTGRPHVA 160
Query: 202 LNQMKTLP--NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L +++L C Y T+++ L+ +M R V P+ T N VL
Sbjct: 161 LRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHA 220
Query: 260 YGKAGMFDQMERVLSGMLESATCK----PDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
+ G D ME SG L + K + +T N + G+++ E+ +
Sbjct: 221 LCQKG--DVME---SGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY 275
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
+ P+ T+N L+ K + + + M TYN +I+ + G +
Sbjct: 276 -VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEA 334
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
+ +G D T+C LING G + + A + ++ YN+++
Sbjct: 335 TELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKG 394
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG--------MNDKV 480
+ ++ +V M E+ C PD T++I+ K G MND +
Sbjct: 395 LCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAI 447
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 119/313 (38%), Gaps = 19/313 (6%)
Query: 176 EPTPELYTALLAAY----------CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC 225
EP+ EL + + AY R +D A + + QP Y I+A
Sbjct: 25 EPSSELTASTIPAYRALIRELVSAGRLDDVDAALASARSHLAPDSLQP---LYVASIQAY 81
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
A R ++ MD + P N ++ A DQ +V ML +A PD
Sbjct: 82 ARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRML-AAGVAPD 140
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI-GAYGKKRMYDKMSSVM 344
T L F G+ + R G D + + ++ G Y Y+
Sbjct: 141 ARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFD 200
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
E + + FP +T+NNV+ A GD ++ GM A+ T I G
Sbjct: 201 EMLGRDVFP-DVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCED 259
Query: 405 GLFHKVISSV-RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
G + ++ V R+ + +A +V YN ++ K + E + RM + C PD T
Sbjct: 260 GRLEEAVALVERMGA--YVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFT 317
Query: 464 FSIMTEAYAKEGM 476
++ + + Y K GM
Sbjct: 318 YNTIIDGYCKSGM 330
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 110/278 (39%), Gaps = 38/278 (13%)
Query: 125 FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
ALQV + E+ + P TY ++ L K G A V N+ + +G P +
Sbjct: 402 LHALQVMNEMVEEGCH-PDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNT 460
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ YC+ +D A + +M T PDV TY++++ A + + + +++M +
Sbjct: 461 LIDGYCKRLKLDSALQLVERMWTY-GIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILK 519
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD- 303
PN +T NI++ + K ++ V+ M + PD + NT++ F G +D
Sbjct: 520 GCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLV-PDAVSFNTLIHGFCRNGDLDG 578
Query: 304 ----------------------------------MMERWYEKFRNFGIDPETRTFNILIG 329
M E+ + + + G P+ T+ IL+
Sbjct: 579 AYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVD 638
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS 367
K D+ + + M F + +T+ ++ +
Sbjct: 639 GLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLA 676
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 154/358 (43%), Gaps = 17/358 (4%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+ALQ+F+ + + F QP TY L+ L K G A + M + PT +Y+ +
Sbjct: 142 EALQLFDKMTGEGF-QPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTI 200
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDER 244
+ + C++ + EA + M P+ +TYS+LI C+ E I Y M R
Sbjct: 201 IDSLCKDRQLTEALSLFSDMLA-KGISPNNFTYSSLIHGLCILGHWKEAIRLFYA-MIHR 258
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ P+ +T N ++ K GM + V+ M++S KPDV T N+++ + ++
Sbjct: 259 KIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDL-KPDVVTYNSLMDGHCLRSEMGK 317
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
++ G P ++ LI Y K ++ DK + E M + + TYN +I
Sbjct: 318 TVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIH 377
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKT------FCCLINGYANAGLFHKVISSVRLAS 418
+G + F +M G D T + C + A A + KVI L
Sbjct: 378 GLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDP 437
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ I Y+ V+ +A +L ++ ++ K PD T++IM ++G+
Sbjct: 438 DIHI------YSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGL 489
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 131/324 (40%), Gaps = 40/324 (12%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
W +A+++F + + P + T+ L+ L K G A V + M++ ++P Y
Sbjct: 244 HWKEAIRLFYAMIHRKI-MPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTY 302
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTL--PNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
+L+ +C S E T+N T+ C P V +Y+TLI + L+++
Sbjct: 303 NSLMDGHCLRS---EMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEE 359
Query: 241 MDERSVTPNTVTQNIVLGGYGKAG--------------------------MFDQMER--- 271
M ++ + P+TVT N ++ G G +FD + +
Sbjct: 360 MSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHR 419
Query: 272 -----VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
VL ++E PD+ + ++ G+++ + K + G+ P+ RT+ I
Sbjct: 420 LAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTI 479
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
+I ++ + + S + M + + TYN + F + F++M + G
Sbjct: 480 MINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRG 539
Query: 387 MKADTKTFCCLINGYANAGLFHKV 410
D T L+ ++ GL V
Sbjct: 540 FSIDVSTTTLLVEMLSDDGLDQSV 563
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 134/338 (39%), Gaps = 45/338 (13%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
YQP T+ L+ L G+ A ++F++M EG +P Y L+ C+ A
Sbjct: 120 YQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAI 179
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
L M+ NC+P V YST+I + C D E + +L+ DM + ++PN T + ++
Sbjct: 180 RFLRSMEQ-RNCRPTVVVYSTIIDSLCKDRQLTEAL-SLFSDMLAKGISPNNFTYSSLIH 237
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
G G + + R+ M+ I
Sbjct: 238 GLCILGHWKEAIRLFYAMIHRK------------------------------------IM 261
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF---SDMGDAKHM 375
P+ TFN L+ A K+ M K V++ M + TYN++++ S+MG ++
Sbjct: 262 PDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNV 321
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
F+ M +G ++ LINGY + K + S+ + + YN +I
Sbjct: 322 ---FDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHG 378
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
L + ++ M PD T+ I+ + K
Sbjct: 379 LCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCK 416
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 77/192 (40%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P + + +L+ + Y++ +FGI T T NILI ++ SV
Sbjct: 52 PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 111
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ + KL + +++T+ +I G F++M EG + D T+ LING
Sbjct: 112 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 171
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
G I +R + V Y+ +I + K L E ++ M K P++ T
Sbjct: 172 VGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFT 231
Query: 464 FSIMTEAYAKEG 475
+S + G
Sbjct: 232 YSSLIHGLCILG 243
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 127/336 (37%), Gaps = 20/336 (5%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKT--LPNCQPDVYTYST 220
A +FN M+ P+ ++ LL + R QM + +P+ + YT +
Sbjct: 38 ALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPH---NTYTLNI 94
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY---GKAG----MFDQMERVL 273
LI + R ++ D+ + P+T T ++ G GK G +FD+M
Sbjct: 95 LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMT--- 151
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
+PDV T T+++ G R+ P ++ +I + K
Sbjct: 152 -----GEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCK 206
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
R + S+ M + TY+++I +G K F M + D T
Sbjct: 207 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 266
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
F L++ G+ K V + + + +V YN+++ ++ + V+ M
Sbjct: 267 FNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMV 326
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
K C P +++ + Y K + DK L +E Q
Sbjct: 327 RKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQ 362
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 160/367 (43%), Gaps = 18/367 (4%)
Query: 126 QALQVFEMLKEQ--PFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
+AL++ M+ + P +Y ++ K G + A ++EM++ I P Y+
Sbjct: 176 EALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYS 235
Query: 184 ALLAAYCRNSLIDEAFVTLNQM---KTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQ 239
+++AA C+ +D+A L M +PNC TY++++ C E I L +
Sbjct: 236 SIIAALCKGQAMDKAMEVLTTMVKNGVMPNCM----TYNSILHGYCSSEQPKEAIGFL-K 290
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
M V P+ VT N ++ K G + ++ M + +PD+ T T+L +A K
Sbjct: 291 KMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGL-EPDIATYCTLLQGYATK 349
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G + M + GI P+ FNILI AY K+ D+ V MR+ TY
Sbjct: 350 GALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTY 409
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
VI G FEQM EG+ + + LI+ +F K + L +
Sbjct: 410 GAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLC---IFDKWDKAEELILE 466
Query: 420 L---QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ I N F+N++I + K ++E E+++ M +P+ T+S + + Y G
Sbjct: 467 MLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGK 526
Query: 477 NDKVYAL 483
D+ L
Sbjct: 527 MDEATKL 533
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 156/351 (44%), Gaps = 11/351 (3%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF-V 200
P TY L+ ++G+ +L +V++G +T LL C + +A +
Sbjct: 85 PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRF-ELIETLYQDMDER--SVTPNTVTQNIVL 257
L +M L +C PDV++ + L+K D R E +E L+ D+R P+ V+ V+
Sbjct: 145 VLRRMTEL-SCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVI 203
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV--DMMERWYEKFRNF 315
G+ K G D+ ML+ PDV T ++I++ KGQ ME +N
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRRI-SPDVVTYSSIIAALC-KGQAMDKAMEVLTTMVKN- 260
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G+ P T+N ++ Y + ++ MR TYN++++ G +
Sbjct: 261 GVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEA 320
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
F+ M G++ D T+C L+ GYA G ++ + + L + I + +N +I A
Sbjct: 321 RKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICA 380
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALEQ 485
K + + E V+ +M++ P+ T+ + K G ++D + EQ
Sbjct: 381 YAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQ 431
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 143/352 (40%), Gaps = 16/352 (4%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L K+G+ ARK+F+ M + G+EP Y LL Y + E
Sbjct: 298 EPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHA 357
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L+ M PD + ++ LI A + + ++ M + + PN VT V+G
Sbjct: 358 LLDLM-VRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGIL 416
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K+G D M++ P++ +++ + D E + + GI
Sbjct: 417 CKSGSVDDAMLYFEQMIDEGL-TPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLN 475
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T FN +I ++ K+ + + + M ++ TY+ +I+ + G
Sbjct: 476 TIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLS 535
Query: 381 QMHAEGMKADTKTFCCLINGYANA-------GLFHKVISSVRLASKLQIAENVSFYNAVI 433
M + GMK D T+ LINGY LF +++SS ++ N+ YN ++
Sbjct: 536 SMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSS-------GVSPNIITYNIIL 588
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
+ +Y + + + + T++I+ K + D+ + Q
Sbjct: 589 QGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQ 640
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/447 (19%), Positives = 186/447 (41%), Gaps = 11/447 (2%)
Query: 36 VPNFNLIHCSVTSTNKHTSFSSES---AVAAKKRLWKEGEYPGV-SETSIPGYRSKRTPI 91
V N + +C ++ H SSE A+ K++ +G P V + S+ Y K
Sbjct: 258 VKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRS 317
Query: 92 KNLKKKLERKAK--AKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMK 149
+K + K + + T + K + + +++ + P +
Sbjct: 318 TEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIH-PDHHVFNI 376
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
L+ K + + A VF++M + G+ P Y A++ C++ +D+A + QM
Sbjct: 377 LICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMID-E 435
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
P++ Y++LI + +++ E L +M +R + NT+ N ++ + K G +
Sbjct: 436 GLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIES 495
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
E++ M+ KP+V T +T++ + G++D + + G+ P+ T+N LI
Sbjct: 496 EKLFDLMVRIGV-KPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLIN 554
Query: 330 AYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
Y + RM D ++ E + P TYN +++ + + + G +
Sbjct: 555 GYCRVSRMDDALALFKEMVSSGVSP-NIITYNIILQGLFHTRRTAAAKELYVGITKSGTQ 613
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
+ T+ +++G L + + + + +N +I A +K E + +
Sbjct: 614 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 673
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + PD T+S+M E ++G
Sbjct: 674 FAALSANGLVPDVRTYSLMAENLIEQG 700
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 144/376 (38%), Gaps = 36/376 (9%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ VF +++ P TY ++ +L KSG + A F +M++EG+ P +YT+L
Sbjct: 389 EAMLVFSKMRQHGL-NPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 447
Query: 186 LAAYC-----------------RNSLIDEAFVT-----------------LNQMKTLPNC 211
+ + C R ++ F L +
Sbjct: 448 IHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGV 507
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
+P+V TYSTLI A + + L M + P+ VT N ++ GY + D
Sbjct: 508 KPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALA 567
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+ M+ S P++ T N IL + + + Y G E T+NI++
Sbjct: 568 LFKEMVSSGV-SPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGL 626
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
K + D+ + + + + T+N +I A +G + F + A G+ D
Sbjct: 627 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDV 686
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
+T+ + GL ++ + N N+++ ++ D+
Sbjct: 687 RTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSM 746
Query: 452 MKEKHCRPDSETFSIM 467
+ EKH ++ T S++
Sbjct: 747 IDEKHFSLEASTASLL 762
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 147/317 (46%), Gaps = 10/317 (3%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A K+F+EM++ + P Y L+ YC+ ++EAF +MK + N +P + T+++L+
Sbjct: 236 AEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMK-VENVEPTIITFNSLL 294
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
A E + + ++M+ P+ T + G+ K G D S L
Sbjct: 295 NGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDA-----SITLSEEAV 349
Query: 283 KPDV----WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
+ V +T + +L+ +G ++ E +KF G+ P FN ++ Y + +
Sbjct: 350 RKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDIN 409
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
K + +E M + TYN++++ F +M + + E ++M +G+ + +T+ LI
Sbjct: 410 KAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLI 469
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
+GY + LF + + K + NV Y +I+ K +++E E + M +
Sbjct: 470 DGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVV 529
Query: 459 PDSETFSIMTEAYAKEG 475
P+++ ++++ + G
Sbjct: 530 PNAQIYNMLIDGSCIAG 546
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 165/418 (39%), Gaps = 43/418 (10%)
Query: 94 LKKKLERK-AKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLV 152
LKK LE A + NT+ + + + ++ E + +P TY L+
Sbjct: 380 LKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVG----LRPNHVTYNSLVK 435
Query: 153 LLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQ 212
+ E A K +MVE+G+ P E Y L+ Y R+ L D F L +M+ +
Sbjct: 436 KFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEK-KGLK 494
Query: 213 PDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG------- 264
P+V +Y LI C DA E E + DM R V PN N+++ G AG
Sbjct: 495 PNVISYGCLINCLCKDANILE-AEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFR 553
Query: 265 MFDQM-------ERVLSGMLESATCKP--------------------DVWTMNTILSVFA 297
FD+M V +L + CK DV T N+++S ++
Sbjct: 554 FFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYS 613
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+ G V YE + GI P T++ LI GK+ + + + + M ++
Sbjct: 614 SAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLV-LVEKIYQEMLQMNLVPDRV 672
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
YN +I + + GD + M A+G++ D T+ CLI G+ G HKV + V
Sbjct: 673 IYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDM 732
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ Y+ +I K D Y+ M E P + +EG
Sbjct: 733 KIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEG 790
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 144/322 (44%), Gaps = 2/322 (0%)
Query: 165 KVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
++F+E+VE G+ P +Y + A + + A + MK P V+ Y+ +I
Sbjct: 168 QLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKR-GGVSPGVFVYNVVIGG 226
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
R + E L+ +M +R V PN +T N ++ GY K G ++ + M + +P
Sbjct: 227 LCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERM-KVENVEP 285
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
+ T N++L+ ++ +R E+ +G P+ T+ L + K D ++
Sbjct: 286 TIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLS 345
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
E + T + ++ A G+ + E ++ G+ F ++NGY
Sbjct: 346 EEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQV 405
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
G +K +++ + + N YN+++ + ++ E E+ K+M EK P+ ET+
Sbjct: 406 GDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETY 465
Query: 465 SIMTEAYAKEGMNDKVYALEQE 486
+ + + Y + + D+ + + +E
Sbjct: 466 NTLIDGYGRSCLFDRCFQILEE 487
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 194/467 (41%), Gaps = 52/467 (11%)
Query: 69 KEGEYPGV-SETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVA-ETFSDHVLK-KQWF 125
+ G PGV + G K +K+ +K + + N + T D K Q
Sbjct: 210 RGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLE 269
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A + E +K + +P T+ LL L ++ E A++V EM G P YT L
Sbjct: 270 EAFNIRERMKVENV-EPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTL 328
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + +D A +TL++ Q YT S L+ A E E + + E
Sbjct: 329 FDGHLKCGNVD-ASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENG 387
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P V N ++ GY + G ++ + M E+ +P+ T N+++ F ++
Sbjct: 388 LAPVGVFFNTIVNGYCQVGDINKAYTTIEKM-EAVGLRPNHVTYNSLVKKFCEMKNMEEA 446
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN----- 360
E+ +K G+ P T+N LI YG+ ++D+ ++E M K +Y
Sbjct: 447 EKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINC 506
Query: 361 -----NVIEAFSDMGDAKHMEYT-------------------------FEQMHAEGMKAD 390
N++EA +GD H F++M A +
Sbjct: 507 LCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPT 566
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDLMEMER 447
T+ LING G KV+ + LAS++ ++ +V YN++IS A ++ +
Sbjct: 567 LVTYNILINGLCKKG---KVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALE 623
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEG--MNDKVYALEQEKLQMLL 492
+Y+ MK+ +P T+ + KEG + +K+Y QE LQM L
Sbjct: 624 LYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIY---QEMLQMNL 667
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 5/253 (1%)
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
+G+ + A + F+EMV I PT Y L+ C+ + EA +++ T DV
Sbjct: 545 AGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEI-TRKGLSFDVI 603
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
TY++LI A + LY+ M + + P T + ++ G GK G+ +E++ M
Sbjct: 604 TYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLV-LVEKIYQEM 662
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI-GAYGKKR 335
L+ PD N ++ + G V + GI P+ T+N LI G + + R
Sbjct: 663 LQ-MNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGR 721
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
M+ K+ +++ M+ + TY+ +I + D + +M G
Sbjct: 722 MH-KVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICD 780
Query: 396 CLINGYANAGLFH 408
LI G G H
Sbjct: 781 NLITGLREEGRSH 793
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 110/245 (44%), Gaps = 3/245 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L K G+ A + +E+ +G+ Y +L++ Y + +A
Sbjct: 565 PTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALEL 624
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
MK +P + TY LI C L+E +YQ+M + ++ P+ V N ++ Y
Sbjct: 625 YETMKK-SGIKPTLNTYHRLIAGC-GKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYV 682
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G + + S M E+ +PD T N ++ +G++ ++ + G+ P+T
Sbjct: 683 EHGDVQKACSLHSAM-EAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKT 741
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T++ILI + K + +D M + F + S +N+I + G + + +
Sbjct: 742 ETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSE 801
Query: 382 MHAEG 386
M+ +G
Sbjct: 802 MNMKG 806
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 91/208 (43%), Gaps = 4/208 (1%)
Query: 284 PDVWTMNTIL-SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
P V ++N L S+ + K D ++ + E + G+ P+ + I A K +
Sbjct: 145 PSVASLNLFLESLVSTKRYEDTLQLFSEIVES-GLRPDQFMYGKAIQAAVKLGDLKRAIE 203
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+M M++ YN VI K E F++M + + T+ LI+GY
Sbjct: 204 LMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYC 263
Query: 403 NAGLFHKVISSVRLASKLQIAE-NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
G + ++R K++ E + +N++++ +A + E +RV + M+ PD
Sbjct: 264 KVGQLEEAF-NIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDR 322
Query: 462 ETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
T++ + + + K G D L +E ++
Sbjct: 323 FTYTTLFDGHLKCGNVDASITLSEEAVR 350
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 154/348 (44%), Gaps = 40/348 (11%)
Query: 126 QALQVFEMLKE-QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+A+ +F +KE + P T+ ++ L GQ E + FN M+ EG++P Y A
Sbjct: 320 KAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNA 379
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ AY + + EAF N++K PDV +Y++L
Sbjct: 380 LIGAYASHGMDKEAFSVFNEIKK-NGFHPDVVSYTSL----------------------- 415
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV-D 303
L YGK+G ++ +V ++ CKP++ + N ++ + +KG + +
Sbjct: 416 ------------LNAYGKSGKPEKAMKVFE-LMRRNHCKPNLVSYNALIDAYGSKGLLTE 462
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+E +E RN G+ P + L+ A G+ K+ SV+ ++ YN+ I
Sbjct: 463 AVEILHEMERN-GVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAI 521
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
++ +G+ + M + +K D T+ LI+G + + + + L+I
Sbjct: 522 GSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIP 581
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
+ Y++VI A K + E E ++ +MK CRPD T++ M AY
Sbjct: 582 LSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAY 629
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 156/377 (41%), Gaps = 7/377 (1%)
Query: 100 RKAKAKAWVNTVAETFSDHVLKKQWFQALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSG 158
+K + K T + H QW A+ + + ML+ P TY L+ G SG
Sbjct: 189 QKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA--IPPSRSTYNNLINACGSSG 246
Query: 159 QPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTY 218
+ A V +M E G+ P + +L+AY R + + MK N +PD T
Sbjct: 247 NWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKG-TNIRPDTTTL 305
Query: 219 STLIKACVDAMRFELIETLYQDMDER--SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
+ +I V + ++ M E+ P+ VT ++ Y G + + + M
Sbjct: 306 NIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTM 365
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
L KP++ + N ++ +A+ G + + + G P+ ++ L+ AYGK
Sbjct: 366 LAEGL-KPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGK 424
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
+K V E MR+ +YN +I+A+ G +M G++ + + C
Sbjct: 425 PEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICT 484
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
L+ G K+ S + A I N + YN+ I + + + + +Y+ M+ K
Sbjct: 485 LLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKK 544
Query: 457 CRPDSETFSIMTEAYAK 473
+PD T++++ K
Sbjct: 545 VKPDPVTYNVLISGCCK 561
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 122/293 (41%), Gaps = 41/293 (13%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
N + ++ H + K+ A VF +K+ F+ P +Y LL GKSG+PE A KVF
Sbjct: 378 NALIGAYASHGMDKE---AFSVFNEIKKNGFH-PDVVSYTSLLNAYGKSGKPEKAMKVFE 433
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
M +P Y AL+ AY L+ EA L++M+ QP++ + TL+ AC
Sbjct: 434 LMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMER-NGVQPNIVSICTLLAACGRC 492
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
+ I+++ + R + NT N +G Y G +D+ + M + KPD T
Sbjct: 493 GQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAM-RTKKVKPDPVT 551
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
+N+LI K Y + ++ M
Sbjct: 552 -----------------------------------YNVLISGCCKMSKYGEALGFLDEMM 576
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
L+ P + Y++VI A+S G E F +M G + D T+ +I+ Y
Sbjct: 577 DLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAY 629
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 2/188 (1%)
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
N ++ + A VD + + + + P+ T+N LI A+G+ + ++M+ M +
Sbjct: 166 NMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR 225
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
P + STYNN+I A G+ K ++M G+ D T +++ Y + K
Sbjct: 226 AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSK 285
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH--CRPDSETFSIM 467
V+S L I + + N VI +K + ++ MKEK C PD TF+ +
Sbjct: 286 VLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTI 345
Query: 468 TEAYAKEG 475
Y+ G
Sbjct: 346 IHLYSVCG 353
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 8/180 (4%)
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ-FPWTSSTYNNV 362
++ RW +F + F +LI + + V +M+ + + + YN +
Sbjct: 116 LLNRWVGRF-------SRKNFPLLIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMM 168
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I + F +M K D +T+ LIN + AG + ++ + + I
Sbjct: 169 IRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAI 228
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
+ S YN +I+AC + + E V K+M E PD T +I+ AY + KV +
Sbjct: 229 PPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLS 288
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 158/345 (45%), Gaps = 6/345 (1%)
Query: 145 GTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQ 204
GT ++ L K+G+ + A + M++ G P ++ L+ C+ I EA L
Sbjct: 50 GTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQG 109
Query: 205 M-KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM-DERSVTPNTVTQNIVLGGYGK 262
M +T+ ++Y++L+ + A + ++ M ERSV P+ V+ +I++ G+ K
Sbjct: 110 MNRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCK 169
Query: 263 AGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETR 322
+ E++ M++ C P+V T N L+ KG++ + YE+ + G P+
Sbjct: 170 IDELGRAEKLYKQMID-LNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVI 228
Query: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
T++ LI + R +D+ + E M + TYN ++ F +M
Sbjct: 229 TYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKM 288
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSV-RLASKLQIAENVSFYNAVISACIKADD 441
G D T+ L+ G+ N G + + + SK + V+ YN ++ +A
Sbjct: 289 VERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVA-YNCLLKGFFRAGK 347
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAK-EGMNDKVYALEQ 485
E ++++ M + C+PD+ + +IM + +K + ++D V E+
Sbjct: 348 PGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFER 392
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 126/285 (44%), Gaps = 2/285 (0%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y +LL + C+ + +AF + M + + PDV +YS LI E LY+ M
Sbjct: 124 YNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQM 183
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ + PN T N L G + G + V M+ SA C PDV T +T++ F+ +
Sbjct: 184 IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMI-SAGCSPDVITYSTLIHGFSLARK 242
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
D +E + G P T+N L+ K+ D+ + M + TY
Sbjct: 243 HDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTT 302
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
++ F ++G + F++M ++G D + CL+ G+ AG + ++ +
Sbjct: 303 LLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRE 362
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKH-CRPDSETFS 465
+ +N +I KA L + V++RM++ H C PD T++
Sbjct: 363 CKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYN 407
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 5/222 (2%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
+T+ FS L ++ QA ++FE + + +P TY LL L K +P+ A ++F
Sbjct: 231 STLIHGFS---LARKHDQAHELFEAMISRG-CRPNAVTYNCLLHGLCKESKPDEAHELFR 286
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
+MVE G +P YT LL +C I++A ++M + + PDV Y+ L+K A
Sbjct: 287 KMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGH-DPDVVAYNCLLKGFFRA 345
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
+ L+Q M R P+TV+ NI++ G KA D V M + C PD+ T
Sbjct: 346 GKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVT 405
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
N+++ + ++ + +++ + P+ FN+L+ A
Sbjct: 406 YNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 447
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 107/231 (46%), Gaps = 5/231 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ + + + A ++F M+ G P Y LL C+ S DEA
Sbjct: 225 PDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHEL 284
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+M C PD TY+TL+ + + E ++ +M + P+ V N +L G+
Sbjct: 285 FRKM-VERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFF 343
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF-RNFGIDPE 320
+AG + ++ M+ S CKPD + N ++ + ++D +E+ ++ G P+
Sbjct: 344 RAGKPGEARQLFQVMV-SRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPD 402
Query: 321 TRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
T+N LI G G++R+ + M V + + +L+ +N ++EA G
Sbjct: 403 LVTYNSLIFGLCGEQRLSEAM-KVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 126/311 (40%), Gaps = 30/311 (9%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY--TYSTLIKACVDAMRFELIETLYQ 239
+TA L C++ I++AF M+ + T ++I+ A R + +L +
Sbjct: 14 WTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLLE 73
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD-VWTMNTILSVFAN 298
M +R P+ T ++++ KA + + L GM + + + ++ N++L+
Sbjct: 74 TMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLCK 133
Query: 299 KGQVDMMERWYEKFRNFG-------IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
+V ++ F F + P+ +++ILI + K + + + M L
Sbjct: 134 AKKV------HQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLN 187
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG------ 405
+TYN + G + +E+M + G D T+ LI+G++ A
Sbjct: 188 CVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAH 247
Query: 406 -LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
LF +IS N YN ++ K E ++++M E+ C PD T+
Sbjct: 248 ELFEAMISR-------GCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTY 300
Query: 465 SIMTEAYAKEG 475
+ + + G
Sbjct: 301 TTLLYGFCNVG 311
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QA++VF+ + + + P Y LL ++G+P AR++F MV +P + +
Sbjct: 315 QAVEVFDEMVSKG-HDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIM 373
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + +D+A +M+ C PD+ TY++LI R +++++D
Sbjct: 374 IDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLK 433
Query: 246 VTPNTVTQNIVLGGYGKAG 264
++P+ N++L AG
Sbjct: 434 LSPDPHAFNVLLEAMYAAG 452
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 97/243 (39%), Gaps = 11/243 (4%)
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV--WTMNTILSVFANKGQVDMME 306
N V LGG K+G +Q M ES + T ++++ G+VD
Sbjct: 10 NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS-----TYNN 361
E G P+ T ++LI K DK+ E+++ + ++ +YN+
Sbjct: 70 SLLETMIKRGYCPDMATHSMLINELCKA---DKIQEAQEFLQGMNRTISTRASSCFSYNS 126
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAE-GMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
++ + F M +E + D ++ LI+G+ + + L
Sbjct: 127 LLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDL 186
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
NV+ YNA ++ ++ + + + VY+ M C PD T+S + ++ +D+
Sbjct: 187 NCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQA 246
Query: 481 YAL 483
+ L
Sbjct: 247 HEL 249
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 154/348 (44%), Gaps = 40/348 (11%)
Query: 126 QALQVFEMLKE-QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+A+ +F +KE + P T+ ++ L GQ E + FN M+ EG++P Y A
Sbjct: 320 KAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNA 379
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ AY + + EAF N++K PDV +Y++L
Sbjct: 380 LIGAYASHGMDKEAFSVFNEIKK-NGFHPDVVSYTSL----------------------- 415
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV-D 303
L YGK+G ++ +V ++ CKP++ + N ++ + +KG + +
Sbjct: 416 ------------LNAYGKSGKPEKAMKVFE-LMRRNHCKPNLVSYNALIDAYGSKGLLTE 462
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+E +E RN G+ P + L+ A G+ K+ SV+ ++ YN+ I
Sbjct: 463 AVEILHEMERN-GVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAI 521
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
++ +G+ + M + +K D T+ LI+G + + + + L+I
Sbjct: 522 GSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIP 581
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
+ Y++VI A K + E E ++ +MK CRPD T++ M AY
Sbjct: 582 LSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAY 629
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 156/377 (41%), Gaps = 7/377 (1%)
Query: 100 RKAKAKAWVNTVAETFSDHVLKKQWFQALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSG 158
+K + K T + H QW A+ + + ML+ P TY L+ G SG
Sbjct: 189 QKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA--IPPSRSTYNNLINACGSSG 246
Query: 159 QPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTY 218
+ A V +M E G+ P + +L+AY R + + MK N +PD T
Sbjct: 247 NWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKG-TNIRPDTTTL 305
Query: 219 STLIKACVDAMRFELIETLYQDMDER--SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
+ +I V + ++ M E+ P+ VT ++ Y G + + + M
Sbjct: 306 NIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTM 365
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
L KP++ + N ++ +A+ G + + + G P+ ++ L+ AYGK
Sbjct: 366 LAEGL-KPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGK 424
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
+K V E MR+ +YN +I+A+ G +M G++ + + C
Sbjct: 425 PEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICT 484
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
L+ G K+ S + A I N + YN+ I + + + + +Y+ M+ K
Sbjct: 485 LLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKK 544
Query: 457 CRPDSETFSIMTEAYAK 473
+PD T++++ K
Sbjct: 545 VKPDPVTYNVLISGCCK 561
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 122/293 (41%), Gaps = 41/293 (13%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
N + ++ H + K+ A VF +K+ F+ P +Y LL GKSG+PE A KVF
Sbjct: 378 NALIGAYASHGMDKE---AFSVFNEIKKNGFH-PDVVSYTSLLNAYGKSGKPEKAMKVFE 433
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
M +P Y AL+ AY L+ EA L++M+ QP++ + TL+ AC
Sbjct: 434 LMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMER-NGVQPNIVSICTLLAACGRC 492
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
+ I+++ + R + NT N +G Y G +D+ + M + KPD T
Sbjct: 493 GQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAM-RTKKVKPDPVT 551
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
+N+LI K Y + ++ M
Sbjct: 552 -----------------------------------YNVLISGCCKMSKYGEALGFLDEMM 576
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
L+ P + Y++VI A+S G E F +M G + D T+ +I+ Y
Sbjct: 577 DLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAY 629
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 2/188 (1%)
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
N ++ + A VD + + + + P+ T+N LI A+G+ + ++M+ M +
Sbjct: 166 NMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR 225
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
P + STYNN+I A G+ K ++M G+ D T +++ Y + K
Sbjct: 226 AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSK 285
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH--CRPDSETFSIM 467
V+S L I + + N VI +K + ++ MKEK C PD TF+ +
Sbjct: 286 VLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTI 345
Query: 468 TEAYAKEG 475
Y+ G
Sbjct: 346 IHLYSVCG 353
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 73/178 (41%), Gaps = 8/178 (4%)
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ-FPWTSSTYNNV 362
++ RW +F + F +LI + + V +M+ + + + YN +
Sbjct: 116 LLNRWVGRF-------SRKNFPLLIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMM 168
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I + F +M K D +T+ LIN + AG + ++ + + I
Sbjct: 169 IRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAI 228
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+ S YN +I+AC + + E V K+M E PD T +I+ AY + KV
Sbjct: 229 PPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKV 286
>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 152/346 (43%), Gaps = 38/346 (10%)
Query: 152 VLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNC 211
VL+GK G+P A +FN +++EG +PT
Sbjct: 22 VLIGK-GKPREAHSIFNSLMDEGHKPT--------------------------------- 47
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
+ TY+TL+ A F+ I L ++E + P+++ N ++ + ++G + +
Sbjct: 48 ---LITYTTLVAALTRQKLFKSILRLISKVEENGMKPDSILFNSIINAFSESGNMKEAMK 104
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+ M ES CKP T NT++ + N G+ + + E ++ G+ P RT+NIL+ A+
Sbjct: 105 LFRKMKESG-CKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGGVKPNQRTYNILVRAW 163
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
K ++ +++ M + TYN + A+++ G+ E +M + +
Sbjct: 164 CNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAEKGETIRAEEMILEMLNRRVTPNE 223
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
+T ++NGY G V +L + N+ +N++I + D ++ V
Sbjct: 224 RTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPNLFVFNSLIKGFLDTMDTEGVDEVLTL 283
Query: 452 MKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
M+E RPD TFS + A++ G DK + + ++ +E H
Sbjct: 284 MEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFNDMVKAEIEPDIH 329
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 164/368 (44%), Gaps = 6/368 (1%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
N++ FS+ K+ A+++F +KE +P T+ L+ G +G+ E A K+
Sbjct: 87 NSIINAFSESGNMKE---AMKLFRKMKESGC-KPTTSTFNTLIKGYGNAGKTEEALKLLE 142
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
+ + G++P Y L+ A+C ++EA+ + +M QPD TY+TL +A +
Sbjct: 143 FLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKM-VASGMQPDAVTYNTLARAYAEK 201
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
E + +M R VTPN T +I++ GY K G R + M E P+++
Sbjct: 202 GETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVL-PNLFV 260
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
N+++ F + + ++ G+ P+ TF+ ++ A+ DK + M
Sbjct: 261 FNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFNDMV 320
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
K + ++ + + + G+ + E M G+ + +I+G+ +AG
Sbjct: 321 KAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWCSAGKME 380
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ ++ ++ N+ Y +I +A ++ E + + M+EK P T ++
Sbjct: 381 HAMKVYEKMCEIGVSPNLKTYETLIWGYGEAKQPLKAEELLQVMEEKGVFPKKGTMQLIA 440
Query: 469 EAYAKEGM 476
+A+ G+
Sbjct: 441 DAWRAIGL 448
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 85/184 (46%)
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
+++V KG+ + + G P T+ L+ A +++++ + ++ + +
Sbjct: 19 LMNVLIGKGKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENG 78
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
S +N++I AFS+ G+ K F +M G K T TF LI GY NAG + +
Sbjct: 79 MKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEAL 138
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
+ + N YN ++ A +++ E + +M +PD+ T++ + AY
Sbjct: 139 KLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAY 198
Query: 472 AKEG 475
A++G
Sbjct: 199 AEKG 202
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
++G+PE A + M + G+ P + T +++ +C ++ A +M + P++
Sbjct: 340 RAGEPEKAESILTSMRKYGVHPNVVICTTVISGWCSAGKMEHAMKVYEKMCEI-GVSPNL 398
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
TY TLI +A + E L Q M+E+ V P T ++ + G+ + E
Sbjct: 399 KTYETLIWGYGEAKQPLKAEELLQVMEEKGVFPKKGTMQLIADAWRAIGLLSESE 453
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 146/346 (42%), Gaps = 3/346 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+ L F LK P TY ++ L K+G A + EM + G+ P +Y +
Sbjct: 289 KCLSFFHRLKACGL-SPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMI 347
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ Y R AF M + +PD+ TY+ L+ A A R + + +++
Sbjct: 348 MDGYARGGDFTAAFKVWEDMVS-AGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANR 406
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P T +L GY K G + V +++A +P V + N++LS A Q++
Sbjct: 407 LLPTIETYTSILDGYVKGGHIQKALEVFD-RIKTAGLRPGVVSYNSLLSGLAKARQMENA 465
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++ G+ P R++ L Y + +K + + M+K Y +++A
Sbjct: 466 RLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKA 525
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
G + F+Q+ G+K + T+C +++G+A G K ++ K +
Sbjct: 526 CCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLD 585
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
Y + I AC ++ D E+ M+EK ++ T++ + +
Sbjct: 586 TICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGW 631
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/350 (19%), Positives = 145/350 (41%), Gaps = 7/350 (2%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
W + + F+++ +P Y L+ + G AR F M I+P +YT
Sbjct: 116 WHKIVNAFQVID-----KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYT 170
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
+L+ AY ++ A +M + Q + + ++I A E E ++
Sbjct: 171 SLIHAYAEARDMEGAVACTEEMLS-QGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKA 229
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
++ P + N ++ Y +AG + +E +L+ M E + ++ T+L+ FA +
Sbjct: 230 ENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGF-QGNLGLYTTVLNGFAEIRDEE 288
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
++ + + G+ P T+ ++ + K K ++E M K Y ++
Sbjct: 289 KCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIM 348
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
+ ++ GD +E M + G+K D T+ L++ + AG K + + ++
Sbjct: 349 DGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLL 408
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ Y +++ +K + + V+ R+K RP +++ + AK
Sbjct: 409 PTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAK 458
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 128/309 (41%), Gaps = 39/309 (12%)
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
+P Y L+ Y R+ A T M+ + +P+V+ Y++LI A +A
Sbjct: 128 KPVLREYGLLVDFYARHGDKVAARATFEAMRA-SHIKPNVHIYTSLIHAYAEA------- 179
Query: 236 TLYQDMDER-SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILS 294
+DM+ + T ++Q I L E+ C +I+S
Sbjct: 180 ---RDMEGAVACTEEMLSQGIQLN-------------------EAVFC--------SIIS 209
Query: 295 VFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 354
+A+ G + E W+EKF+ + P +N ++ AY + + + +++ M + F
Sbjct: 210 GYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQG 269
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
Y V+ F+++ D + F ++ A G+ T+ C++ + AG K + +
Sbjct: 270 NLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDIL 329
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
K ++ N Y ++ + D +V++ M +PD T++I+ A+ K
Sbjct: 330 EEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKA 389
Query: 475 GMNDKVYAL 483
G DK +
Sbjct: 390 GRMDKALGV 398
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 128/304 (42%), Gaps = 16/304 (5%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ K+G+ + A V + + PT E YT++L Y + I +A
Sbjct: 373 KPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALE 432
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+++KT +P V +Y++L+ A + E + +M V PN + + GY
Sbjct: 433 VFDRIKT-AGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGY 491
Query: 261 GKAG-------MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
+AG MF +M++ D+ +L G + +++
Sbjct: 492 ARAGDVEKAFGMFQRMKK--------ENLAIDIVAYGALLKACCKSGAMQRAVEVFQQIT 543
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
+ G+ T+ ++ + +K K +++ M+K F + Y + I+A GD +
Sbjct: 544 DAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTE 603
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
+ T M + ++ + +T+ LI+G+ A + IS A + + + N ++
Sbjct: 604 EVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSALSNCLL 663
Query: 434 SACI 437
S I
Sbjct: 664 SGLI 667
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 167/407 (41%), Gaps = 42/407 (10%)
Query: 86 SKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWF--QALQVFEMLKEQPFYQPK 143
S R ++ + L + KA +N + H+L + F +AL+V+ + + +P
Sbjct: 168 SIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGL-KPS 226
Query: 144 EGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLN 203
TY L+V LGK E+ + EM + G+ P +T + R IDEA+
Sbjct: 227 LKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFR 286
Query: 204 QMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKA 263
+M C PD+ TY+ LI A +A + E + L+ M P+ V +L +
Sbjct: 287 RMDD-EGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDF 345
Query: 264 GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
G D + S M E+ PDV T ++ V D ++ R GI P T
Sbjct: 346 GDLDTFKEFWSQM-EADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHT 404
Query: 324 FNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
+N LI G R+ D + ++ M + T+ TYN I+ F G+ TFE+M
Sbjct: 405 YNTLICGLLRAGRIEDAL-KLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKM 463
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
A+G I N+ NA + + + L
Sbjct: 464 KAKG-----------------------------------IVPNIVACNASLYSLAEMGRL 488
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
E + ++ ++E PDS T+++M + Y+K G D+ L E ++
Sbjct: 489 REAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIR 535
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 155/355 (43%), Gaps = 6/355 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A ++F + ++ P TY L+ L +GQ E A+++F +M G +P +Y L
Sbjct: 280 EAYEIFRRMDDEG-CGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITL 338
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L + +D +QM+ PDV T++ L+ A F+ + M ++
Sbjct: 339 LDKFNDFGDLDTFKEFWSQMEA-DGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQG 397
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ PN T N ++ G +AG + ++L G +ES +P +T N + F G+
Sbjct: 398 ILPNLHTYNTLICGLLRAGRIEDALKLL-GTMESVGVQPTAYTYNIFIDYFGKSGETGKA 456
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+EK + GI P N + + + + ++ +R+ S TYN +++
Sbjct: 457 VETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKC 516
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+S +G +M G + D LI+ AG + ++++
Sbjct: 517 YSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPT 576
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
V YN ++S K + + +++ M EK C P++ +F+ + + + K ND+V
Sbjct: 577 VVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCK---NDEV 628
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 133/279 (47%), Gaps = 3/279 (1%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
+ + +A F+++++Q P TY L+ L ++G+ E A K+ M G++PT
Sbjct: 381 RDFDEAFATFDVMRKQGIL-PNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYT 439
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y + + ++ +A T +MK P++ + + + + R +T++ +
Sbjct: 440 YNIFIDYFGKSGETGKAVETFEKMKA-KGIVPNIVACNASLYSLAEMGRLREAKTMFNGL 498
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
E + P++VT N+++ Y K G D+ +LS M+ + C+PDV +N+++ G+
Sbjct: 499 RENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNG-CEPDVIVVNSLIDSLYKAGR 557
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
VD + +++ ++ + P T+N L+ GK+ K + E M + + + ++N
Sbjct: 558 VDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNT 617
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+++ F + + F +M K D T+ +I G
Sbjct: 618 LLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYG 656
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 138/307 (44%), Gaps = 7/307 (2%)
Query: 96 KKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLG 155
KKL ++ + E H +K W +F+ +K P T+ LL + G
Sbjct: 780 KKLGISPTLASYNCLIGELLEVHYTEKAW----DLFKDMKNVG-CAPDAFTFNMLLAVHG 834
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
KSG+ +++ EM+ +P Y ++++ +++ +D+A + + + +P
Sbjct: 835 KSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVS-SDFRPTP 893
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
TY LI R E L+++M + PN NI++ GYGK G + ++
Sbjct: 894 RTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKR 953
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
M+ +PD+ + ++ G+VD ++ + ++ G+DP+ +N +I GK +
Sbjct: 954 MVNEGI-RPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQ 1012
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
++ ++ MR TYN+++ G + + +E++ G++ D T+
Sbjct: 1013 RMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYN 1072
Query: 396 CLINGYA 402
LI GY+
Sbjct: 1073 ALIRGYS 1079
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 146/332 (43%), Gaps = 4/332 (1%)
Query: 143 KEGTYMKLLV-LLGKSGQPELARKVFNEMVEE-GIEPTPELYTALLAAYCRNSLIDEAFV 200
+E +++ LV +L K + A ++F++ ++ GI PT Y L+ ++A+
Sbjct: 750 REDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWD 809
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
MK + C PD +T++ L+ + + + LY++M R P+ +T NIV+
Sbjct: 810 LFKDMKNV-GCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSL 868
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K+ D+ ++ S+ +P T ++ A G+++ R +E+ ++G P
Sbjct: 869 AKSNNLDKALDFFYDLV-SSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPN 927
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
FNILI YGK + + + M +Y +++ G Y F
Sbjct: 928 CAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFN 987
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
++ + G+ D + +ING + + ++ I ++ YN+++ A
Sbjct: 988 ELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAG 1047
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
+ + +R+Y+ ++ PD T++ + Y+
Sbjct: 1048 MVEQAKRMYEELQLAGLEPDVFTYNALIRGYS 1079
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 147/350 (42%), Gaps = 14/350 (4%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K+ A Q+F+ ++ P +Y L+ L + E A +F +M G P
Sbjct: 766 KRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFT 825
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+ LLA + ++ I E F +M + C+PD TY+ +I + + + + D+
Sbjct: 826 FNMLLAVHGKSGKITELFELYKEMIS-RRCKPDAITYNIVISSLAKSNNLDKALDFFYDL 884
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
P T ++ G K G ++ R+ M + CKP+ N +++ + G
Sbjct: 885 VSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYG-CKPNCAIFNILINGYGKIGD 943
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ + +++ N GI P+ +++ IL+ D+ ++ YN
Sbjct: 944 TETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNR 1003
Query: 362 VIEAFSDMGDAKHMEYT---FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
+I +G ++ ME + +M G+ D T+ L+ N GL V + R+
Sbjct: 1004 IING---LGKSQRMEEALALYNEMRNRGIVPDLYTYNSLM---LNLGLAGMVEQAKRMYE 1057
Query: 419 KLQIA---ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+LQ+A +V YNA+I +++ VYK M C P+ T++
Sbjct: 1058 ELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYA 1107
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 132/318 (41%), Gaps = 1/318 (0%)
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
E+V GI L+ C++ A+ ++ P + +Y+ LI ++
Sbjct: 742 ELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEV 801
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
E L++DM P+ T N++L +GK+G ++ + M+ S CKPD T
Sbjct: 802 HYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMI-SRRCKPDAIT 860
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
N ++S A +D ++ + P RT+ LI K ++ + E M
Sbjct: 861 YNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMS 920
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
+ +N +I + +GD + F++M EG++ D K++ L++ AG
Sbjct: 921 DYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVD 980
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ + + + YN +I+ K+ + E +Y M+ + PD T++ +
Sbjct: 981 EALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLM 1040
Query: 469 EAYAKEGMNDKVYALEQE 486
GM ++ + +E
Sbjct: 1041 LNLGLAGMVEQAKRMYEE 1058
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 91/211 (43%), Gaps = 7/211 (3%)
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T N +L +V+ M +E + I + T+ + A + +M++V+ M
Sbjct: 124 TCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKM 183
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
RK F + +YN +I G + +M +EG+K KT+ L+
Sbjct: 184 RKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDS 243
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
V+ ++ L + NV + I +A + E +++RM ++ C PD T++++
Sbjct: 244 EMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVL 303
Query: 468 TEAYAKEGMNDKVYALEQEK-LQMLLEASGH 497
+A G LE K L + ++A+GH
Sbjct: 304 IDALCNAG------QLENAKELFVKMKANGH 328
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 67/156 (42%), Gaps = 3/156 (1%)
Query: 334 KRMYDKMSSVMEYMRKLQFP---WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
K M D + ++ + +FP T+ T N ++E + M FE M + ++ D
Sbjct: 97 KSMTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRD 156
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
T+ + + G ++ + + K N YN +I I++ E VY+
Sbjct: 157 LDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYR 216
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
RM + +P +T+S + A K+ ++ V L +E
Sbjct: 217 RMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKE 252
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 174/367 (47%), Gaps = 9/367 (2%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
LK Q QAL + + F+ + +Y L+ L K G+ + A ++ + ++P
Sbjct: 275 LKGQIHQALHFHDKVIAMGFHL-DQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDV 333
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+Y ++ C++ +++AF L K PDV+TY+ LI + + L+
Sbjct: 334 VMYNTIIDGMCKDKHVNDAF-DLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFN 392
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
M +++ P+ T +I++ G+ K G + + VL+ M++ + KPDV T ++++ +
Sbjct: 393 KMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSI-KPDVVTYSSLMDGYCLV 451
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
+V+ E + + G+ +++NI+I + K +M D+ + + M Q TY
Sbjct: 452 NEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITY 511
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+++I+ G + ++MH G + D T+ +++ H V ++ L +K
Sbjct: 512 SSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKK---HHVDKAITLLTK 568
Query: 420 LQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
L+ I +++ Y ++ ++ L + +V++ + K D +++M + + +G+
Sbjct: 569 LKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGL 628
Query: 477 NDKVYAL 483
D+ AL
Sbjct: 629 FDEALAL 635
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 144/347 (41%), Gaps = 37/347 (10%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ G+ + A +FN+M + I P ++ L+ +C++ I EA
Sbjct: 366 PDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNV 425
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L M + +PDV TYS+L+ E+++ M R VT N + NI++ G+
Sbjct: 426 LAMMMK-QSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFC 484
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K M D+ ++ M PDV T ++++ G++ ++ G P+
Sbjct: 485 KIKMVDEAMKLFKEM-HHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDI 543
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+N ++ A KK DK +++ ++ +TY +++ G + FE
Sbjct: 544 ITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFED 603
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
+ +G D + +I G+ + GLF + ++
Sbjct: 604 LLVKGYNLDVYAYTVMIQGFCDKGLFDEALA----------------------------- 634
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
+ +M+E C PD++T+ I+ + ++ ND L +E +
Sbjct: 635 ------LLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMI 675
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 163/401 (40%), Gaps = 18/401 (4%)
Query: 91 IKNLKKKLERKA----KAKAWVNTVA----ETFSDHVLKKQWFQALQVFEMLKEQPFYQP 142
I+ LK +RK K W+ + F L+ + F L F++L E
Sbjct: 175 IEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLKDFLQSRLFNVLHSFKILIEYHKTFI 234
Query: 143 KEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTL 202
K+ +K + + P++ ++ G EP T + +C I +A
Sbjct: 235 KQKCLLKSFEISIEYTPPKI--------LKNGYEPDTITLTTFIKGFCLKGQIHQALHFH 286
Query: 203 NQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGK 262
+++ + D +Y TLI + L + D + V P+ V N ++ G K
Sbjct: 287 DKVIAM-GFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCK 345
Query: 263 AGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETR 322
+ + S + S PDV+T N ++S F G++ + K + I P+
Sbjct: 346 DKHVNDAFDLYSEKV-SKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVY 404
Query: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
TF+IL+ + K + +V+ M K TY+++++ + + + E F M
Sbjct: 405 TFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTM 464
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
G+ A+ +++ +ING+ + + + + QI +V Y+++I K+ +
Sbjct: 465 SHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRI 524
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ M + +PD T++ + +A K+ DK L
Sbjct: 525 SYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITL 565
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 110/262 (41%), Gaps = 3/262 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A V M+ +Q +P TY L+ + A +FN M G+ + Y +
Sbjct: 421 EAKNVLAMMMKQSI-KPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIM 479
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +C+ ++DEA +M PDV TYS+LI + R L +M R
Sbjct: 480 INGFCKIKMVDEAMKLFKEMHH-KQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRG 538
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ +T N +L K D+ +L+ L+ +PD+ T ++ G+++
Sbjct: 539 QQPDIITYNSILDALCKKHHVDKAITLLTK-LKGQGIRPDMNTYTILVKGLCQSGKLEDA 597
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ +E G + + + ++I + K ++D+ +++ M + + TY +I +
Sbjct: 598 RKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILS 657
Query: 366 FSDMGDAKHMEYTFEQMHAEGM 387
+ + E +M G+
Sbjct: 658 LFEKDENDMAEKLLREMIMRGL 679
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 167/342 (48%), Gaps = 10/342 (2%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
+Y L+ L K G+ A + + ++P +Y ++ + C+ L++EAF ++M
Sbjct: 192 SYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEM 251
Query: 206 KTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG 264
+ PDV TYS LI C+ + I+ L+ M ++ P+ T NI++ + K G
Sbjct: 252 IS-KGISPDVVTYSALISGFCILGKLNDAID-LFNKMILENIKPDVYTFNILVNAFCKDG 309
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
+ + V M++ KP+ T N+++ + +V+ + + G++P+ +++
Sbjct: 310 KMKEGKTVFDMMMKQGI-KPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSY 368
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
+I+I + K + +D+ ++ + M + TY+++I+ S G + +QMH
Sbjct: 369 SIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHD 428
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADD 441
G+ +T+ +++ H+V ++ L +KL+ I N+ Y+ +I ++
Sbjct: 429 RGVPPTIRTYNSILDALCK---IHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGK 485
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
L + +V++ + K + +T++IM + + EG+ ++ AL
Sbjct: 486 LEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALAL 527
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 160/351 (45%), Gaps = 8/351 (2%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP Y ++ + K A +F+EM+ +GI P Y+AL++ +C +++A
Sbjct: 222 QPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAID 281
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
N+M L N +PDVYT++ L+ A + + +T++ M ++ + PN VT N ++ GY
Sbjct: 282 LFNKM-ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGY 340
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
++ + + + M + PD+ + + +++ F + D +++ I P+
Sbjct: 341 CLVKEVNKAKSIFNTMAQGGV-NPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPD 399
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T++ LI K +++ M P T TYN++++A +
Sbjct: 400 VVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLT 459
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE---NVSFYNAVISACI 437
++ +G++ + T+ LI G +G K+ + ++ L + NV Y +I
Sbjct: 460 KLKDKGIQPNMYTYSILIKGLCQSG---KLEDARKVFEGLLVKGHNLNVDTYTIMIQGFC 516
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
E + +M++ C PD++T+ I+ + K+ ND L +E +
Sbjct: 517 VEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMI 567
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 185/458 (40%), Gaps = 39/458 (8%)
Query: 30 NKHRAQVP----NFNLIHCSVTSTNKHTSFSSESAVAAKKRLWKEGEYPGVSETSIPGYR 85
N H +P N I S TST H++ + AV+ RL + P
Sbjct: 35 NTHFNFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTP----------- 83
Query: 86 SKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEG 145
P K L K+K + +TV ++ +K F+ ++ P
Sbjct: 84 ----PAFEFNKILGSLVKSKHY-HTVL-----YLSQKMEFRGIK------------PNLV 121
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
L+ + G A VF ++++ G P +T L+ C I +AF+ +++
Sbjct: 122 NCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKV 181
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
L D +Y TLI L Q +D V PN V N ++ K +
Sbjct: 182 VAL-GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKL 240
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
++ + S M+ S PDV T + ++S F G+++ + K I P+ TFN
Sbjct: 241 VNEAFDLFSEMI-SKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFN 299
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
IL+ A+ K + +V + M K TYN++++ + + + + F M
Sbjct: 300 ILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQG 359
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G+ D +++ +ING+ F + ++ + + I +V Y+++I K+ +
Sbjct: 360 GVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYA 419
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
++ +M ++ P T++ + +A K DK AL
Sbjct: 420 LQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIAL 457
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/340 (18%), Positives = 132/340 (38%), Gaps = 37/340 (10%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y++ + N+ +D+A N++ N P + ++ ++ + V + + + L Q M
Sbjct: 53 YSSTSTTFHSNNDVDDAVSLFNRLLR-RNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKM 111
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ R + PN V NI++ + + G+ V + +L+ PD T T++ KGQ
Sbjct: 112 EFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYV-PDTITFTTLIKGLCLKGQ 170
Query: 302 VDMMERWYEKFRNFG-----------------------------------IDPETRTFNI 326
+ +++K G + P +N
Sbjct: 171 IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNT 230
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
+I + K ++ ++ + M TY+ +I F +G F +M E
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILEN 290
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+K D TF L+N + G + + + K I N YN+++ ++ + +
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK 350
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
++ M + PD +++SIM + K D+ L +E
Sbjct: 351 SIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKE 390
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ + LK++ QP TY L+ L +SG+ E ARKVF ++ +G + YT +
Sbjct: 453 KAIALLTKLKDKGI-QPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIM 511
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +C L +EA L++M+ C PD TY +I + ++ E L ++M R
Sbjct: 512 IQGFCVEGLFNEALALLSKMED-NGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 570
Query: 246 VTPNTV 251
V P +
Sbjct: 571 VRPRQI 576
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 154/339 (45%), Gaps = 8/339 (2%)
Query: 140 YQPKEGTYMKLL---VLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLID 196
Y+P T+ LL L+ + G A + MV+ G EP +Y L+ C+N ++
Sbjct: 137 YEPSIVTFGSLLHGFCLVNRIGD---AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELN 193
Query: 197 EAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIV 256
A LN+M+ DV TY+TL+ + R+ + +DM +RS+ P+ VT +
Sbjct: 194 IALELLNEMEK-KGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTAL 252
Query: 257 LGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG 316
+ + K G D+ + + M++S+ P+ T N+I++ G++ ++ ++ + G
Sbjct: 253 IDVFVKQGNLDEAQELYKEMIQSSV-DPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG 311
Query: 317 IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME 376
P T+N LI + K RM D+ + + M F TYN +I + +G +
Sbjct: 312 CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVAL 371
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
F M + + D T C L++G G + + + + YN +I
Sbjct: 372 DIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGL 431
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
KAD + + ++ R+ + +PD+ T++IM K G
Sbjct: 432 CKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 155/402 (38%), Gaps = 45/402 (11%)
Query: 75 GVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVF-EM 133
G++ ++ G+R P NL L A A+A+ + + + + ++ A +F EM
Sbjct: 8 GIATSTAKGFRRVVNP--NL---LGGGAAARAFSDYREKLRTGFLHSIRFEDAFALFFEM 62
Query: 134 LKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNS 193
+ QP P + +LL + E +M GI +T L+ +CR S
Sbjct: 63 VHSQPL--PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCS 120
Query: 194 LIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQ 253
+ A L +M L +P + T+ +L+ R +L M + PN V
Sbjct: 121 RLSFALSVLGKMMKLGY-EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVY 179
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
N ++ G K G + +L+ M E DV T NT+L+ G+ R
Sbjct: 180 NTLIDGLCKNGELNIALELLNEM-EKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
I+P+ TF LI + K+ D+ + + M + + TYN++I G
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLY 298
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
+ TF+ M A+ G F V++ YN +I
Sbjct: 299 DAKKTFDLM-------------------ASKGCFPNVVT----------------YNTLI 323
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
S K + E ++++RM + D T++ + Y + G
Sbjct: 324 SGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 30/212 (14%)
Query: 132 EMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
E+ KE Q P TY ++ L G+ A+K F+ M +G P Y L++ +
Sbjct: 267 ELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
C+ ++DE + L Q + D++TY+TLI + + ++ M R VTP+
Sbjct: 327 CKFRMVDEG-MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD----------VWTMNTILSVFANK 299
+T I+L G ++G +ESA K D + N ++
Sbjct: 386 IITHCILLHGL-----------CVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLC-- 432
Query: 300 GQVDMMERWYEKFRNF---GIDPETRTFNILI 328
+ D +E+ +E F G+ P+ RT+ I+I
Sbjct: 433 -KADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 111/266 (41%), Gaps = 28/266 (10%)
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMF-DQMERVLSGMLESATCK---------------PDV 286
R V PN +LGG A F D E++ +G L S + P +
Sbjct: 18 RRVVNPN------LLGGGAAARAFSDYREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSI 71
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
+L+ AN + + + + +K +GI + +F ILI + + SV+
Sbjct: 72 VDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGK 131
Query: 347 MRKLQFPWTSSTYNNVIEAF---SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
M KL + + T+ +++ F + +GDA + M G + + + LI+G
Sbjct: 132 MMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVIL---MVKSGYEPNVVVYNTLIDGLCK 188
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
G + + + K + +V YN +++ + + R+ + M ++ PD T
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 464 FSIMTEAYAKEGMNDKVYALEQEKLQ 489
F+ + + + K+G D+ L +E +Q
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQ 274
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/274 (17%), Positives = 100/274 (36%), Gaps = 1/274 (0%)
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
P + ++ L+ A + R+E + Q M+ ++ + + I++ + + V
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
L M++ +P + T ++L F ++ G +P +N LI
Sbjct: 129 LGKMMKLGY-EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLC 187
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K + ++ M K TYN ++ G M + D
Sbjct: 188 KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVV 247
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
TF LI+ + G + + + + N YN++I+ L + ++ + M
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLM 307
Query: 453 KEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
K C P+ T++ + + K M D+ L Q
Sbjct: 308 ASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
>gi|296081889|emb|CBI20894.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 156/352 (44%), Gaps = 4/352 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE-EGIEPTPELYTA 184
+A++ F +KE +P T+ L+ G +G+PE ++K+ M + E + P Y
Sbjct: 160 EAMKYFWKMKESG-SKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNV 218
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ A+C I +A+ + +M QPD TY+T+ A E + +M
Sbjct: 219 LVRAWCNKKNIMKAWNVVYKM-VASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNS 277
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+V PN T I++GGY K G + + + M + +P++ N+++ F + D
Sbjct: 278 NVQPNERTCCIIIGGYCKEGKIKEALQFVYRM-KDLGLQPNLVVFNSLIKGFIDAVDRDG 336
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ FG+ P+ TF+ ++ A+ DK + + M K + + Y+ + +
Sbjct: 337 VNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAK 396
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
+ G+ + E M G + F +ING+ +AG I + IA
Sbjct: 397 GYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCECGIAP 456
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
N+ + +I +A + E V + M+E + +P+ T ++ EA+ G+
Sbjct: 457 NLKTFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTTLLLVAEAWRATGL 508
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 135/287 (47%), Gaps = 2/287 (0%)
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
+P + TY+TL+ A F+ I ++ ++E + P+++ N V+ + ++G + +
Sbjct: 104 KPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMK 163
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF-RNFGIDPETRTFNILIGA 330
M ES + KP T NT++ + G+ + ++ E ++ + P RT+N+L+ A
Sbjct: 164 YFWKMKESGS-KPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRA 222
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
+ K+ K +V+ M + TYN + A++ G+A E +M ++ +
Sbjct: 223 WCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPN 282
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
+T C +I GY G + + V L + N+ +N++I I A D + V
Sbjct: 283 ERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLT 342
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
M+E +PD TFS + A++ G DK + + ++ ++ H
Sbjct: 343 LMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAH 389
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 160/351 (45%), Gaps = 9/351 (2%)
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
KL+ ++ + G+P+ + + + ++E G +P+ YT LLAA D ++Q++
Sbjct: 77 KLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEE- 135
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
+PD ++ +I A ++ + + M E P T T N ++ GYG AG ++
Sbjct: 136 NGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEE 195
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF--GIDPETRTFNI 326
+++L M + +P++ T N ++ + NK ++M+ W ++ G+ P+ T+N
Sbjct: 196 SQKLLELMSQDENVRPNLRTYNVLVRAWCNKK--NIMKAWNVVYKMVASGLQPDAVTYNT 253
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
+ AY + + ++ M+ T +I + G K +M G
Sbjct: 254 IATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLG 313
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
++ + F LI G+ +A V + L + + +V ++ +++A A + +
Sbjct: 314 LQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCR 373
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
++ M + +PD+ +SI+ + Y + G +K +E L ++++ H
Sbjct: 374 EIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKA----EEILNAMIKSGFH 420
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 120/286 (41%), Gaps = 37/286 (12%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY + ++G+ A + EM ++P ++ YC+ I EA
Sbjct: 245 QPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQ 304
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ +MK L QP++ +++LIK +DA+ + + + M+E V P+ +T + ++ +
Sbjct: 305 FVYRMKDL-GLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAW 363
Query: 261 GKAG-------MFDQM----------------------------ERVLSGMLESATCKPD 285
AG +FD M E +L+ M++S P+
Sbjct: 364 SAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGF-HPN 422
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
V TI++ + + G+++ + +EK GI P +TF LI YG+ R K V++
Sbjct: 423 VVIFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVLQ 482
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
M + +T V EA+ G K + E M +T
Sbjct: 483 IMEEFNVQPEKTTLLLVAEAWRATGLKKEANRILSAVKNEEMTHET 528
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 2/200 (1%)
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
L +C+ V + ++++ KG+ ++ + G P T+ L+ A ++
Sbjct: 64 LSKTSCR-TVRSRTKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKH 122
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
+D + S++ + + S +N VI AFS+ G+ + F +M G K T TF
Sbjct: 123 FDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNT 182
Query: 397 LINGYANAGLFHKVISSVRLASKLQ-IAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
LI GY AG + + L S+ + + N+ YN ++ A ++M+ V +M
Sbjct: 183 LIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVAS 242
Query: 456 HCRPDSETFSIMTEAYAKEG 475
+PD+ T++ + AYA+ G
Sbjct: 243 GLQPDAVTYNTIATAYAQNG 262
>gi|357159149|ref|XP_003578355.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Brachypodium distachyon]
Length = 857
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 149/338 (44%), Gaps = 9/338 (2%)
Query: 108 VNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
N V + DH + AL F LK QP ++ TY ++ +LG++ Q + R +
Sbjct: 334 ANQVLKLLHDHTM------ALGFFHWLKRQPGFKHDGHTYTTMIGILGQARQFGIMRNLL 387
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
+EM + +PT Y ++ AY R + + EA +M+ +PD TY TLI
Sbjct: 388 HEMNRDRCKPTVVTYNRIIHAYGRANYLREAVKVFEEMEEA-GYEPDRVTYCTLIDIHAK 446
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
A E+ LY M E ++P+T T + ++ GK G ++ M+E+ C P++
Sbjct: 447 AGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENG-CTPNLV 505
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T N I+++ A D + + Y + G P+ T++I++ G D+ +V M
Sbjct: 506 TYNIIIALQAKARNYDNVVKLYRDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEM 565
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
R+ P Y +++ + G+ + M +G++ + T L++ + F
Sbjct: 566 RRDWAP-DEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRF 624
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
S ++ + ++ Y ++S C A M +
Sbjct: 625 QDAYSVLQNMLAQGLVPSLQTYTLLLSCCTDAHAQMGL 662
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 2/211 (0%)
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
+L+S CK D + N +L + + W + R G + T+ +IG G+ R
Sbjct: 321 VLDSLHCKIDAFQANQVLKLLHDHTMALGFFHWLK--RQPGFKHDGHTYTTMIGILGQAR 378
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
+ M +++ M + + T TYN +I A+ + FE+M G + D T+C
Sbjct: 379 QFGIMRNLLHEMNRDRCKPTVVTYNRIIHAYGRANYLREAVKVFEEMEEAGYEPDRVTYC 438
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
LI+ +A AG + ++ ++ + Y+A+++ K L +++ M E
Sbjct: 439 TLIDIHAKAGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIEN 498
Query: 456 HCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
C P+ T++I+ AK D V L ++
Sbjct: 499 GCTPNLVTYNIIIALQAKARNYDNVVKLYRD 529
>gi|357120336|ref|XP_003561883.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62590-like [Brachypodium distachyon]
Length = 525
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 152/377 (40%), Gaps = 43/377 (11%)
Query: 129 QVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAA 188
+V + + PF+ P + L+ L SG+P AR F+ ++ G+ PT +TALL +
Sbjct: 64 EVLRLFRFLPFH-PTARIFTTLISSLAASGRPMAARAAFSSLIVSGLTPTASAFTALLKS 122
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP 248
Y +S +D + M C PD Y+ I D+ R E M + V P
Sbjct: 123 Y--DSSLDAMYQVFLAMAA-ARCSPDAAVYNCYISVLCDSQRLEEARGFLDHMVDEGVRP 179
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV---------------------- 286
+ +L GY + G + E+++ M++ A C+PDV
Sbjct: 180 TVRSYTTILRGYCQQGKILEAEKLVDDMVD-AGCQPDVVSYSVLIEGLCSVREFDKVERI 238
Query: 287 --------WTMNTI-----LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
WT N I +S G +D R + R+ G+ P T NIL +
Sbjct: 239 LRESEDKGWTPNAITYNIYMSGLCRTGLLDDTFRQVDIMRSRGLLPTVETVNILFDCLCR 298
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+ + ++E+ +L + YN ++ D+GD + + +G+ D +
Sbjct: 299 DSRFSEAVLLLEHSEELGWHADVFCYNTLMGRLCDIGDFARVFKLLVDLLKKGIGPDMFS 358
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
F I G AG H+V L I +V +N +I A DL ++ Y M
Sbjct: 359 FTIAIRGLCGAGK-HRVAEC--LIDNESIGYDVVAFNTLIHGFCIAGDLRGVKLTYMNMY 415
Query: 454 EKHCRPDSETFSIMTEA 470
+ P++ T +++ ++
Sbjct: 416 SRQISPNNYTHALLIDS 432
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 110/279 (39%), Gaps = 18/279 (6%)
Query: 136 EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI 195
E + P TY + L ++G + + + M G+ PT E L CR+S
Sbjct: 243 EDKGWTPNAITYNIYMSGLCRTGLLDDTFRQVDIMRSRGLLPTVETVNILFDCLCRDSRF 302
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI 255
EA + L + L DV+ Y+TL+ D F + L D+ ++ + P+ + I
Sbjct: 303 SEAVLLLEHSEEL-GWHADVFCYNTLMGRLCDIGDFARVFKLLVDLLKKGIGPDMFSFTI 361
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
+ G AG RV ++++ + DV NT++ F G + ++ Y +
Sbjct: 362 AIRGLCGAGK----HRVAECLIDNESIGYDVVAFNTLIHGFCIAGDLRGVKLTYMNMYSR 417
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
I P T +LI + R + + + +R P NN + AK +
Sbjct: 418 QISPNNYTHALLIDSLFNDRKFVEAIDTLASLRDGLVPDHLIHLNNFL--------AKGI 469
Query: 376 EYT-----FEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
++T +++ G DT F L+ G + +
Sbjct: 470 KFTKVLNLLDEIRYRGFVLDTCIFIPLVRVLCCEGYYQR 508
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 116/312 (37%), Gaps = 43/312 (13%)
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
PTP Y AL++AY R DE L + LP P ++TLI + + R
Sbjct: 44 PTPAAYNALMSAYSRAGRPDE---VLRLFRFLPF-HPTARIFTTLISSLAASGRPMAARA 99
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
+ + +TP +L Y + D M +V M +A C PD N +SV
Sbjct: 100 AFSSLIVSGLTPTASAFTALLKSYDSS--LDAMYQVFLAM-AAARCSPDAAVYNCYISVL 156
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
+ +++ + + + G+ P R++ ++ Y ++
Sbjct: 157 CDSQRLEEARGFLDHMVDEGVRPTVRSYTTILRGYCQQ---------------------- 194
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
++EA E + M G + D ++ LI G + F KV +R
Sbjct: 195 ---GKILEA----------EKLVDDMVDAGCQPDVVSYSVLIEGLCSVREFDKVERILRE 241
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG- 475
+ N YN +S + L + R M+ + P ET +I+ + ++
Sbjct: 242 SEDKGWTPNAITYNIYMSGLCRTGLLDDTFRQVDIMRSRGLLPTVETVNILFDCLCRDSR 301
Query: 476 MNDKVYALEQEK 487
++ V LE +
Sbjct: 302 FSEAVLLLEHSE 313
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 43/240 (17%), Positives = 81/240 (33%), Gaps = 41/240 (17%)
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P N ++ Y +AG D++ R+ + P T++S A G+
Sbjct: 43 VPTPAAYNALMSAYSRAGRPDEVLRLFRFL----PFHPTARIFTTLISSLAASGRPMAAR 98
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ G+ P F L+ +Y D M V M + ++ YN I
Sbjct: 99 AAFSSLIVSGLTPTASAFTALLKSYDSS--LDAMYQVFLAMAAARCSPDAAVYNCYISVL 156
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
D + + M EG++ +++ ++ GY G
Sbjct: 157 CDSQRLEEARGFLDHMVDEGVRPTVRSYTTILRGYCQQG--------------------- 195
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
++E E++ M + C+PD ++S++ E DKV + +E
Sbjct: 196 --------------KILEAEKLVDDMVDAGCQPDVVSYSVLIEGLCSVREFDKVERILRE 241
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 152/348 (43%), Gaps = 11/348 (3%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y E +Y L+ L K+GQ A ++ +M E+ + P Y+ ++ C++ LI +A
Sbjct: 156 YPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADA- 214
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+ L + T DV Y++LI C ++ L M ++ P+ T NI++
Sbjct: 215 LRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDA 274
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K G + + V + M++ KPD+ T N ++ F V + + G++P
Sbjct: 275 LCKEGRIVEAQGVFAVMMKRGE-KPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEP 333
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ +N+LI Y K M D+ + + +R +TYN++I+ +G ++
Sbjct: 334 DVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELV 393
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV----SFYNAVISA 435
++M G D T+ ++ + + + K IS R QI + + Y+ ++
Sbjct: 394 DEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFR-----QIVQGIWPDFYMYDVIVEN 448
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
K + L E + + C P+ T++IM A K+ D+ L
Sbjct: 449 FCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTL 496
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 163/393 (41%), Gaps = 39/393 (9%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
ML++ P P + KLL + + G A +F+++ +GI P+ T L+ YC
Sbjct: 45 RMLRKHP--PPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCH 102
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAM-------RFELIE-------- 235
+ + AF L + + QP++ T++TLI C++ M R +L+
Sbjct: 103 QAHLSFAFSLLGTILKM-GFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEF 161
Query: 236 -------------------TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
L Q M+E V PN +T + V+ G K + R+ S +
Sbjct: 162 SYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFS-L 220
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
+ S DV N+++ + GQ R I+P+ TFNIL+ A K+
Sbjct: 221 VTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGR 280
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
+ V M K TYN ++E F + F +M G++ D +
Sbjct: 281 IVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNV 340
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
LINGY + + + + + N++ YN++I K + ++ + M ++
Sbjct: 341 LINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRG 400
Query: 457 CRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
PD T++I +A+ K +K +L ++ +Q
Sbjct: 401 QSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ 433
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 115/250 (46%), Gaps = 3/250 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ S AR++FN MV+ G+EP Y L+ YC+ ++DEA V
Sbjct: 297 KPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMV 356
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+++ N P++ TY++LI R ++ L +M +R +P+ VT NI L +
Sbjct: 357 LFKEIRC-KNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAF 415
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K+ +++ + +++ PD + + I+ F ++ + E + G P
Sbjct: 416 CKSKPYEKAISLFRQIVQGIW--PDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPN 473
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
RT+ I+I A K +D+ +++ M P + T+ +I A + + E
Sbjct: 474 VRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRL 533
Query: 381 QMHAEGMKAD 390
+M G+ D
Sbjct: 534 EMIERGLVND 543
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 135/333 (40%), Gaps = 40/333 (12%)
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
GQ A ++ MV I P + L+ A C+ I EA M +PD+ T
Sbjct: 244 GQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGE-KPDIVT 302
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y+ L++ + L+ M +R + P+ + N+++ GY K M D+ VL +
Sbjct: 303 YNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDE-AMVLFKEI 361
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
P++ T N+++ G++ ++ ++ + G P+ T+NI + A+ K + Y
Sbjct: 362 RCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPY 421
Query: 338 DKMSSVMEYMRKLQFPWTS-STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
+K S+ + + +Q W Y+ ++E F K E + + G + +T+
Sbjct: 422 EKAISL--FRQIVQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTI 479
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
+IN + ++ SF D+ M + +M +
Sbjct: 480 MINA---------------------LCKDCSF-----------DEAMTL---LSKMDDND 504
Query: 457 CRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
C PD+ TF + A + DK L E ++
Sbjct: 505 CPPDAVTFETIIGALQERNETDKAEKLRLEMIE 537
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 153/335 (45%), Gaps = 2/335 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P +G L+ L K G+ A +++ ++E+G AL+ C+ + EA
Sbjct: 453 RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVR 512
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +M D TY+TLI C + E L +M ++ + P+T T N+++ G
Sbjct: 513 LLKKMLE-RGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGM 571
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ G D+ L +S P+V+T ++ + +++ E+ + + ++
Sbjct: 572 CRIGKLDEAVN-LWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELN 630
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+ +N LI AY + + + + MR P T++TY+++I ++G + + +
Sbjct: 631 SVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLID 690
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M EG+ + + LI GY G KV++ ++ S I N Y +I K+
Sbjct: 691 EMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSG 750
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
D+ ++ M K PD+ T++++T + KEG
Sbjct: 751 DMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEG 785
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 145/370 (39%), Gaps = 37/370 (10%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
P T ++ K GQ E A + EM+ G P +T ++ C NS + A
Sbjct: 383 NPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALR 442
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L +M L N +P+ +TL+ C + + +E L+ + E+ N VT N ++ G
Sbjct: 443 FLREM-LLRNMRPNDGLLTTLVGGLCKEGKHSDAVE-LWFRLLEKGFGANLVTTNALIHG 500
Query: 260 YGKAGMFDQMERVLSGMLE--------------SATCK--------------------PD 285
K G + R+L MLE S CK PD
Sbjct: 501 LCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPD 560
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
+T N ++ G++D + + ++ + P T+ ++I Y K ++ +
Sbjct: 561 TFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFT 620
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
+ S YN +I A+ G+ + M ++G+ T T+ LI+G N G
Sbjct: 621 ELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIG 680
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ K + NV Y A+I K + ++ V + M P+ T++
Sbjct: 681 RMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYT 740
Query: 466 IMTEAYAKEG 475
+M + Y+K G
Sbjct: 741 VMIDGYSKSG 750
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 104/225 (46%), Gaps = 2/225 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY ++ K+ + E K+F E++ + +E +Y L+ AYCRN EAF
Sbjct: 594 PNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKL 653
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ M++ P TYS+LI + R E + L +M + + PN V ++GGY
Sbjct: 654 HDDMRS-KGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYC 712
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G D++ VL M S P+ T ++ ++ G + + + GI P+T
Sbjct: 713 KLGQMDKVVNVLQEM-SSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDT 771
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
T+N+L + K+ ++ + +YM + P TY ++ +
Sbjct: 772 VTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGW 816
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 146/340 (42%), Gaps = 20/340 (5%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
K G+ E A ++F +M + G+ P Y L+ C++ +DEAF +M +
Sbjct: 258 KGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKM-VKDGVNATL 316
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
TYS LI + +F ++ ++ E+ TPN V N ++ GY K G R+
Sbjct: 317 ITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGD 376
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF--RNFGIDPETRTFNILIGAYGK 333
M+ S P+ T+N+I+ F GQ++ E E+ R F I+P F +I
Sbjct: 377 MV-SKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPG--AFTTIIHWLC- 432
Query: 334 KRMYDKMSSVMEYMRKL---QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
M + S + ++R++ ++ G + ++ +G A+
Sbjct: 433 --MNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGAN 490
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQ----IAENVSFYNAVISACIKADDLMEME 446
T LI+G G + +VRL K+ + + ++ YN +IS C K + E
Sbjct: 491 LVTTNALIHGLCKTGNMQE---AVRLLKKMLERGFVLDKIT-YNTLISGCCKEGKVEEGF 546
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
++ M ++ PD+ T++++ + G D+ L E
Sbjct: 547 KLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNE 586
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 134/311 (43%), Gaps = 38/311 (12%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+++ + + E+ F K TY L+ K G+ E K+ EMV++GIEP Y L
Sbjct: 509 EAVRLLKKMLERGFVLDKI-TYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLL 567
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ CR +DEA N+ K+ + P+VYTY +I A + E E L+ ++ ++
Sbjct: 568 IHGMCRIGKLDEAVNLWNECKS-RDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQN 626
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ N+V N ++ Y + G + ++ M S P T ++++ N G+++
Sbjct: 627 LELNSVVYNTLIRAYCRNGNTVEAFKLHDDM-RSKGIPPTTATYSSLIHGMCNIGRMEDA 685
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ ++ R G+ P + LIG Y K DK+ +V++ M TY +I+
Sbjct: 686 KCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDG 745
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKT-------FC----------------------- 395
+S GD K +M +G+ DT T FC
Sbjct: 746 YSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLD 805
Query: 396 -----CLINGY 401
L++G+
Sbjct: 806 EITYTTLVHGW 816
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 155/391 (39%), Gaps = 6/391 (1%)
Query: 104 AKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELA 163
A A V+ + + + A+ VF L + + P T LL L K+ + E +
Sbjct: 173 AVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVF-PTVKTCTFLLSSLVKANELEKS 231
Query: 164 RKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIK 223
VF E + +G+ P L++ + A+C+ +++A M+ L P+V TY+ LI
Sbjct: 232 YWVF-ETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKL-GVSPNVVTYNNLIH 289
Query: 224 ACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK 283
+ + M + V +T ++++ G K F++ VL LE
Sbjct: 290 GLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGF-T 348
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P+ NT++ + G + R + GI+P + T N +I + K ++ +
Sbjct: 349 PNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECI 408
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+E M F + +I + +M M+ + L+ G
Sbjct: 409 LEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCK 468
Query: 404 AGLFHKVISS-VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
G + RL K N+ NA+I K ++ E R+ K+M E+ D
Sbjct: 469 EGKHSDAVELWFRLLEK-GFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKI 527
Query: 463 TFSIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
T++ + KEG ++ + L E ++ +E
Sbjct: 528 TYNTLISGCCKEGKVEEGFKLRGEMVKQGIE 558
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 160/403 (39%), Gaps = 52/403 (12%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
A+Q+F + E+ P TY L+ L K G + A + +MV++G+ T Y+ L
Sbjct: 264 DAIQLFFDM-EKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVL 322
Query: 186 LAAYCRNSLIDEAFVTLNQMKTL-PNCQPDVYTYSTLIKACV------DAMRFELIETLY 238
+ + +EA L + TL P+ Y+TLI DA+R
Sbjct: 323 INGLMKLEKFNEANSVLKE--TLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIR------ 374
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML--------------------- 277
DM + + PN+VT N ++ G+ K G +Q E +L ML
Sbjct: 375 GDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMN 434
Query: 278 ---ESA----------TCKPDVWTMNTILSVFANKGQ-VDMMERWYEKFRNFGIDPETRT 323
ESA +P+ + T++ +G+ D +E W+ G T
Sbjct: 435 SRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEK-GFGANLVT 493
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
N LI K + +++ M + F TYN +I G + +M
Sbjct: 494 TNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMV 553
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
+G++ DT T+ LI+G G + ++ + NV Y +I KAD +
Sbjct: 554 KQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIE 613
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
E E+++ + ++ +S ++ + AY + G + + L +
Sbjct: 614 EGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDD 656
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 155/343 (45%), Gaps = 2/343 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY ++ L K G +LA + +M + IE +Y ++ C+ +D+A
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALN 279
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M +PDV+TYS+LI + R+ L DM ER + PN VT + ++ +
Sbjct: 280 LFTEMDN-KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 338
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + E++ M++ + PD++T +++++ F ++D + +E + P
Sbjct: 339 VKEGKLVEAEKLYDEMIKRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T++ LI + K + ++ + M + + TY +I F D + + F+
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
QM + G+ + T+ L++G G K + + + ++ YN +I KA
Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 517
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ + ++ + K P+ ++ M + ++G ++ +L
Sbjct: 518 KVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 149/339 (43%), Gaps = 8/339 (2%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y+P T LL S + A + ++MVE G +P +T L+ ++ EA
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
++QM CQPD+ TY T++ +L +L + M++ + + V N ++ G
Sbjct: 209 ALVDQM-VQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDG 267
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K D + + M ++ +PDV+T ++++S N G+ R I+P
Sbjct: 268 LCKYKHMDDALNLFTEM-DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP 326
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF---SDMGDAKHME 376
TF+ LI A+ K+ + + + M K TY+++I F + +AKHM
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM- 385
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
FE M ++ + T+ LI G+ A + + R S+ + N Y +I
Sbjct: 386 --FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+A D + V+K+M P+ T++I+ + K G
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 186/430 (43%), Gaps = 11/430 (2%)
Query: 57 SESAVAAKKRLWKEGEYPG-VSETSIPGYRSKRTPIK---NLKKKLERKAKAKAWVNTVA 112
+ AVA ++ + G P V+ ++ KR I +L KK+E K K +A V +
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKME-KGKIEADV-VIY 261
Query: 113 ETFSDHVLK-KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMV 171
T D + K K AL +F + + +P TY L+ L G+ A ++ ++M+
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGI-RPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 172 EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRF 231
E I P ++AL+ A+ + + EA ++M + PD++TYS+LI R
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK-RSIDPDIFTYSSLINGFCMHDRL 379
Query: 232 ELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNT 291
+ + +++ M + PN VT + ++ G+ KA ++ + M + V T T
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV-TYTT 438
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
++ F D + +++ + G+ P T+NIL+ K K V EY+++
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
TYN +IE G + F + +G+ + + +I+G+ G +
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
S ++ + N YN +I A ++ D + K M+ D+ T ++T
Sbjct: 559 SLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 618
Query: 472 AKEGMNDKVY 481
+G DK +
Sbjct: 619 -HDGRLDKSF 627
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 153/360 (42%), Gaps = 16/360 (4%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
A+ +F +M+K +PF P + KLL + K + EL + +M GI Y+
Sbjct: 66 DAVDLFGDMVKSRPF--PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
+ +CR S + A L +M L +PD+ T S+L+ + R L M E
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
P+T T ++ G + ++ M++ C+PD+ T T+++ +G +D+
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGTVVNGLCKRGDIDL 241
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+K I+ + +N +I K + D ++ M TY+++I
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL---Q 421
+ G M + + TF LI+ + G K++ + +L ++
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG---KLVEAEKLYDEMIKRS 358
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK-----EGM 476
I ++ Y+++I+ D L E + +++ M K C P+ T+S + + + K EGM
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 143/324 (44%), Gaps = 17/324 (5%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A +F +MV+ P+ + LL+A + + + QM+TL D+YTYS I
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL-GISHDLYTYSIFI 125
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
+ L + M + P+ VT + +L GY + ++ M+E
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY- 184
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
KPD +T T++ + ++ G P+ T+ ++ K+ D S
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 343 VMEYMRKLQFPWTSSTYNNVIEA---FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+++ M K + YN +I+ + M DA ++ F +M +G++ D T+ LI+
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNL---FTEMDNKGIRPDVFTYSSLIS 301
Query: 400 GYANAGLFHKVISSVRLASKL---QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
N G + + RL S + +I NV ++A+I A +K L+E E++Y M ++
Sbjct: 302 CLCNYGRWS---DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 457 CRPDSETFSIMTEAYAKEGMNDKV 480
PD T+S + + M+D++
Sbjct: 359 IDPDIFTYSSLINGFC---MHDRL 379
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 101/249 (40%), Gaps = 1/249 (0%)
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
D ++ + L+ DM + P+ V N +L K F ++ L +++ D+
Sbjct: 60 DIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF-ELVISLGEQMQTLGISHDL 118
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
+T + ++ F + Q+ + K G +P+ T + L+ Y + ++++
Sbjct: 119 YTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M ++ + + T+ +I A +QM G + D T+ ++NG G
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+S ++ K +I +V YN +I K + + ++ M K RPD T+S
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 467 MTEAYAKEG 475
+ G
Sbjct: 299 LISCLCNYG 307
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 62/165 (37%)
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P FN L+ A K ++ + S+ E M+ L TY+ I F
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
+M G + D T L+NGY ++ ++ V ++ + + +I
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ E + +M ++ C+PD T+ + K G D +L
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 145/335 (43%), Gaps = 2/335 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY ++ + +SG LA + +M E ++ Y+ ++ + CR+ ID A
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 239
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M+T + V TY++L++ A ++ L +DM R + PN +T N++L +
Sbjct: 240 LFKEMET-KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 298
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + + M+ P++ T NT++ + + ++ + P+
Sbjct: 299 VKEGKLQEANELYKEMITRGI-SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 357
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
TF LI Y + D V + K + TY+ +++ F G K E F+
Sbjct: 358 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 417
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M + G+ D T+ L++G + G K + K ++ + Y +I K
Sbjct: 418 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 477
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + ++ + K +P+ T+++M K+G
Sbjct: 478 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 512
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 147/359 (40%), Gaps = 37/359 (10%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY ++ L + G + A +F EM +GI+ + Y +L+ C+ ++ + L M
Sbjct: 220 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 279
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ P+V T++ L+ V + + LY++M R ++PN +T N ++ GY
Sbjct: 280 VS-REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR 338
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILS-------------VFAN-------------- 298
+ +L M+ + C PD+ T +++ VF N
Sbjct: 339 LSEANNMLDLMVRNK-CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYS 397
Query: 299 --------KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
G++ + E +++ + G+ P+ T+ IL+ +K + E ++K
Sbjct: 398 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 457
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
+ Y +IE G + F + +G+K + T+ +I+G G +
Sbjct: 458 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 517
Query: 411 ISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+R + A N YN +I A ++ DL ++ + MK D+ + ++ +
Sbjct: 518 NILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 576
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 153/354 (43%), Gaps = 11/354 (3%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
A+ +F EM++ +P P + + + ++ Q L ++ GI
Sbjct: 61 DAIALFQEMIRSRPL--PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 118
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
++ +CR A+ L ++ L +PD T++TLIK + L M E
Sbjct: 119 MINCFCRCCKTCFAYSVLGKVMKLGY-EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 177
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
P+ VT N ++ G ++G +L M E K DV+T +TI+ G +D
Sbjct: 178 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKM-EERNVKADVFTYSTIIDSLCRDGCIDA 236
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+++ GI T+N L+ K ++ + +++ M + T+N +++
Sbjct: 237 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 296
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
F G + +++M G+ + T+ L++GY + + + L + + +
Sbjct: 297 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 356
Query: 425 NVSFYNAVISA-CI--KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++ + ++I C+ + DD M +V++ + ++ ++ T+SI+ + + + G
Sbjct: 357 DIVTFTSLIKGYCMVKRVDDGM---KVFRNISKRGLVANAVTYSILVQGFCQSG 407
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 156/369 (42%), Gaps = 8/369 (2%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H K +A + +K++ P TY L+ + G + A V M G EP
Sbjct: 254 HCRKGMLGEARTLLARMKKEGIV-PTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEP 312
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
Y L A C+ +DEAF ++M+ L PDV TY+TL+ AC R L
Sbjct: 313 DLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNL 372
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT---CKPDVWTMNTILS 294
++M E+ V + VT NI++ G + G Q+E L G LE T PDV T NT++
Sbjct: 373 LEEMREKGVKSSLVTHNIIVKGLCREG---QLEEAL-GRLEMMTEEGLTPDVITYNTLID 428
Query: 295 VFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 354
G V ++ G+ +T T N L+ K++ Y++ ++ + F
Sbjct: 429 ASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVP 488
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
+Y V+ A+ + +++M + T+ LI G + G + I +
Sbjct: 489 DEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKL 548
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
++ + + + YN +I A K DL + + + +M E +PD T + +
Sbjct: 549 NELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLY 608
Query: 475 GMNDKVYAL 483
G +K L
Sbjct: 609 GRLEKAMKL 617
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 143/329 (43%), Gaps = 44/329 (13%)
Query: 175 IEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELI 234
++P L+ LLA++ ++L D A T +++ LP+ + +S + CV
Sbjct: 119 LDPLRHLHRHLLASFPTSALADAALSTYARLR-LPHLAAQLL-HSFRRRGCV-------- 168
Query: 235 ETLYQDMDERSVTPNTVTQNIVLGGYGKA------GMFDQMERVLSGMLESATCKPDVWT 288
P+ N VL ++ D +++ L P+ +T
Sbjct: 169 ------------RPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLH-----PNHYT 211
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
N ++ +KG + K + FG+ P+ T+N L+ A+ +K M + +++ M+
Sbjct: 212 FNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMK 271
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
K T +TYN ++ A++ +G K E M A G + D T+ L G AG
Sbjct: 272 KEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAG--- 328
Query: 409 KVISSVRLASKLQ----IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
KV + +L +++ ++ +V YN ++ AC K + + + M+EK + T
Sbjct: 329 KVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTH 388
Query: 465 SIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
+I+ + +EG ++ +L+M+ E
Sbjct: 389 NIIVKGLCREGQLEEALG----RLEMMTE 413
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 134/355 (37%), Gaps = 38/355 (10%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A ++M G+ P Y LL A+CR ++ EA L +MK P TY+TL+
Sbjct: 228 ALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKK-EGIVPTRATYNTLV 286
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
A + + + M P+ T N++ G +AG D+ ++ M +
Sbjct: 287 SAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIV 346
Query: 283 KPDVWTMNTIL-SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
PDV T NT++ + F + D + E+ R G+ T NI++ ++ ++
Sbjct: 347 SPDVVTYNTLVDACFKCQRSSDALN-LLEEMREKGVKSSLVTHNIIVKGLCREGQLEEAL 405
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+E M + TYN +I+A G+ ++M G+K DT T L+
Sbjct: 406 GRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNL 465
Query: 402 ANAGLFHKVISSVRLAS-----------------------------------KLQIAENV 426
+ + +R K ++ ++
Sbjct: 466 CKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSI 525
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
S YN +I L E + E PD T++I+ AY KEG +K +
Sbjct: 526 STYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAF 580
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 122/307 (39%), Gaps = 40/307 (13%)
Query: 132 EMLKEQP--FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
E+L+ P + P E +Y ++ K +PE A +++EM++ + P+ Y L+
Sbjct: 476 ELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGL 535
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
+ EA LN++ + PD TY+ +I A E + M E S P+
Sbjct: 536 STMGKLTEAIDKLNELMEM-GLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPD 594
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
VT N ++ G G ++ ++ +E K DV T NT++ VD R++
Sbjct: 595 VVTCNTLMNGLCLYGRLEKAMKLFESWVEKGK-KVDVITYNTLIQALCKDNDVDTALRFF 653
Query: 310 EKFRNFGIDPETRTFNILIGAYGK-------KRMYDKMSSVMEYMRKLQFPWTSS----- 357
G+ P+ T+N+L+ A + ++M K++ + + +P S
Sbjct: 654 ADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAV 713
Query: 358 ------------------------TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+YN I+ G K + ++M +GM D T
Sbjct: 714 ETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNST 773
Query: 394 FCCLING 400
+ L+ G
Sbjct: 774 YITLMEG 780
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 137/332 (41%), Gaps = 9/332 (2%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
T LL L K + E A ++ + G P Y ++AAY + + A ++M
Sbjct: 457 TLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEM 516
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRF-ELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG 264
P + TY+TLIK + E I+ L + M E + P+ T NI++ Y K G
Sbjct: 517 IK-RKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELM-EMGLVPDDTTYNIIIHAYCKEG 574
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
++ + + M+E+ + KPDV T NT+++ G+++ + +E + G + T+
Sbjct: 575 DLEKAFQFHNKMVEN-SFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITY 633
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
N LI A K D M TYN ++ A S+ G + + +++
Sbjct: 634 NTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNE 693
Query: 385 EGMKADTKTFCCLINGYANA---GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
G K + F I A G +V S + Q + S+ + CI
Sbjct: 694 SG-KLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCI-GGQ 751
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
L E + V M +K D+ T+ + E K
Sbjct: 752 LKEAKAVLDEMMQKGMSVDNSTYITLMEGLIK 783
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 156/340 (45%), Gaps = 6/340 (1%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ L K GQ A +V ++ + + +Y+ ++ C++ L+ +A+ ++M
Sbjct: 160 TYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEM 219
Query: 206 --KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKA 263
K +P P V T+S+LI +F+ L+ +M +++ P+ T NI++ K
Sbjct: 220 IVKRIP---PTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKE 276
Query: 264 GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
G + + V++ M++ +P V T NT++ + +V + + P +R+
Sbjct: 277 GKIKEAKNVIAVMMKEGV-EPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRS 335
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
+NI+I + K +M D+ + M TYN++I+ G + ++MH
Sbjct: 336 YNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMH 395
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
+ AD T+ LI+ + K I+ V+ + I N+ YN +I K L
Sbjct: 396 NNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLK 455
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ V++ + K ++ T++IM KEG+ D+ L
Sbjct: 456 NAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVL 495
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 116/272 (42%), Gaps = 15/272 (5%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA--- 198
P T+ L+ L K G+ + A+ V M++EG+EPT Y L+ YC + + +A
Sbjct: 261 PDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHV 320
Query: 199 FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
+++M+ PN + +Y+ +I + L+ +M R + P+ VT N ++
Sbjct: 321 LSIISRMRVAPNSR----SYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLID 376
Query: 259 GYGKAGMFDQMERVLSGMLESATCKP-DVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
G KAG ++ M C P D+ T N+++ VF VD +K + GI
Sbjct: 377 GLCKAGRIPYAWELVDEM--HNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGI 434
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P T+NILI K V + + + + TYN +I G E
Sbjct: 435 QPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEV 494
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
+M G+ D T+ +I LFHK
Sbjct: 495 LLSKMEDNGIIPDAVTYETIIQ-----ALFHK 521
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 136/314 (43%), Gaps = 8/314 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ G+ + A ++FNEMV + I P + L+ A C+ I EA
Sbjct: 226 PTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNV 285
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ M +P V TY+TL+ + + + V PN+ + NI++ G+
Sbjct: 286 IAVMMK-EGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFC 344
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K M D+ + M P T N+++ G++ ++ N I +
Sbjct: 345 KIKMVDEALCLFHEMCCRGIA-PHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADI 403
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+N LI + K + DK ++++ +++ TYN +I+ G K+ + F+
Sbjct: 404 VTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQD 463
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIK 438
+ +G + T+ +ING GLF + + L SK++ I + Y +I A
Sbjct: 464 LLIKGYNVNAWTYNIMINGLCKEGLFDE---AEVLLSKMEDNGIIPDAVTYETIIQALFH 520
Query: 439 ADDLMEMERVYKRM 452
D+ + +++ + M
Sbjct: 521 KDENEKAQKLLREM 534
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/314 (15%), Positives = 119/314 (37%), Gaps = 22/314 (7%)
Query: 194 LIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM-RFELIETLYQDMDERSVTPNTVT 252
++D A ++ N+M+ + P + ++ ++ + + + +L M+ + V P+ T
Sbjct: 46 VVDNAVLSFNRMRQIRQ-TPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFT 104
Query: 253 QNIVLGGYGKAGMFDQMERVLSGMLESATC--------------------KPDVWTMNTI 292
+I++ Y G V + +L+ C + T +
Sbjct: 105 LSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGIL 164
Query: 293 LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF 352
++ GQ + + ++ ++ +I K ++ + M +
Sbjct: 165 INGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRI 224
Query: 353 PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVIS 412
P T T++++I F +G K F +M + + D TF L++ G + +
Sbjct: 225 PPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKN 284
Query: 413 SVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
+ + K + V YN ++ +++ + + V + P+S +++IM +
Sbjct: 285 VIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFC 344
Query: 473 KEGMNDKVYALEQE 486
K M D+ L E
Sbjct: 345 KIKMVDEALCLFHE 358
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/307 (20%), Positives = 113/307 (36%), Gaps = 16/307 (5%)
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
+M +G++P + L+ YC + AF ++ + C + L V A
Sbjct: 92 QMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLA 151
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
+ F L N VT I++ G K G +VL +E +V
Sbjct: 152 LGFHL---------------NHVTYGILINGLCKMGQTRAALQVLR-QIEGKLVNTNVVM 195
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
+TI+ V Y + I P TF+ LI + + + M
Sbjct: 196 YSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMV 255
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
+ T+N +++A G K + M EG++ T+ L++GY
Sbjct: 256 MKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVG 315
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
K + + S++++A N YN +I+ K + E ++ M + P T++ +
Sbjct: 316 KAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLI 375
Query: 469 EAYAKEG 475
+ K G
Sbjct: 376 DGLCKAG 382
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ + + +KE QP TY L+ L K GQ + A+ VF +++ +G Y +
Sbjct: 421 KAIALVKKIKEHGI-QPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIM 479
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ L DEA V L++M+ PD TY T+I+A E + L ++M +
Sbjct: 480 INGLCKEGLFDEAEVLLSKMED-NGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKG 538
Query: 246 VT 247
V
Sbjct: 539 VV 540
>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 584
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 162/375 (43%), Gaps = 47/375 (12%)
Query: 115 FSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG 174
S + K + +A+ +F L E+ ++P TY L+ L + + + +++ E G
Sbjct: 50 MSTLIRKGKPHEAVTIFNSLTEEG-HKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENG 108
Query: 175 IEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMR---- 230
++P L+ A++ A+ + + EA +MK C+P T++TLIK R
Sbjct: 109 VKPDSILFNAMINAFSDSGKVHEAMKIFRKMKEC-GCKPTTSTFNTLIKGFGIVGRPHEA 167
Query: 231 FELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMN 290
+L+E + QD + V PN T NI++ + ++ V+ M+ S +PD+ T N
Sbjct: 168 MKLLEMMIQDGN---VKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGM-QPDIVTYN 223
Query: 291 TILSVFANKGQVDMMERWYEKFRNFG--IDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
T+ FA G+ D ER K + + + P RT I+I Y K+ + + M+
Sbjct: 224 TLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMK 283
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
+L +N++I+ + D+ D +E M G+K D T+ ++N ++++GL
Sbjct: 284 ELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMD 343
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
E ++ M + PD + +SI+
Sbjct: 344 NC-----------------------------------EEIFDDMVKAEIEPDIQAYSILA 368
Query: 469 EAYAKEGMNDKVYAL 483
+ Y + G DK AL
Sbjct: 369 KGYVRAGQPDKAEAL 383
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 141/333 (42%), Gaps = 40/333 (12%)
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
KL+ L + G+P A +FN + EEG +PT
Sbjct: 48 KLMSTLIRKGKPHEAVTIFNSLTEEGHKPT------------------------------ 77
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
+ TY+TL+ A RF I +L ++E V P+++ N ++ + +G +
Sbjct: 78 ------IITYTTLVAALTRLKRFNSIPSLLSKVEENGVKPDSILFNAMINAFSDSGKVHE 131
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQV-DMMERWYEKFRNFGIDPETRTFNIL 327
++ M E CKP T NT++ F G+ + M+ ++ + P RT+NIL
Sbjct: 132 AMKIFRKMKECG-CKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDGNVKPNERTYNIL 190
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM--HAE 385
I A+ K ++ +VM M TYN + AF+ G+ + E +M +
Sbjct: 191 IQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKMQQYNN 250
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
+K + +T +I GY G + + + +L + N +N++I + D +
Sbjct: 251 KVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGV 310
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
E M+E +PD T+S + A++ G+ D
Sbjct: 311 EEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMD 343
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 131/281 (46%), Gaps = 4/281 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+++ EM+ + +P E TY L+ + E A V ++MV G++P Y L
Sbjct: 166 EAMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTL 225
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPN-CQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDE 243
A+ +N D A + +M+ N +P+ T +I+ C + E + LY+ M E
Sbjct: 226 ARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYK-MKE 284
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
V PN V N ++ GY D +E L+ ++E KPDV T +TI++ +++ G +D
Sbjct: 285 LGVHPNPVVFNSLIKGYLDITDTDGVEEALT-LMEEFGIKPDVVTYSTIMNAWSSSGLMD 343
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
E ++ I+P+ + ++IL Y + DK +++ M K + +I
Sbjct: 344 NCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTII 403
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
+ G +E+M+ G + KT+ LI GY A
Sbjct: 404 SGWCAAGKMDCALRLYEKMNEMGTPLNLKTYETLIWGYGEA 444
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 104/256 (40%), Gaps = 4/256 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVE--EGIEPTPELYTALLAAYCRNSLIDEA 198
QP TY L ++G+ + A ++ +M + ++P ++ YC+ + EA
Sbjct: 216 QPDIVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEA 275
Query: 199 FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
L +MK L P+ +++LIK +D + +E M+E + P+ VT + ++
Sbjct: 276 LRFLYKMKEL-GVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMN 334
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
+ +G+ D E + M++ A +PD+ + + + GQ D E +G+
Sbjct: 335 AWSSSGLMDNCEEIFDDMVK-AEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQ 393
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
F +I + D + E M ++ P TY +I + + E
Sbjct: 394 ANVVIFTTIISGWCAAGKMDCALRLYEKMNEMGTPLNLKTYETLIWGYGEAKQPWKAEEL 453
Query: 379 FEQMHAEGMKADTKTF 394
M G+ + T
Sbjct: 454 LVTMEESGVAPEMSTI 469
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 86/206 (41%), Gaps = 2/206 (0%)
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
S +C+ V + ++S KG+ + G P T+ L+ A + + ++
Sbjct: 37 SNSCQ-TVISRTKLMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFN 95
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+ S++ + + S +N +I AFSD G F +M G K T TF LI
Sbjct: 96 SIPSLLSKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLI 155
Query: 399 NGYANAGLFHKVISSVR-LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
G+ G H+ + + + + N YN +I A ++L E V +M
Sbjct: 156 KGFGIVGRPHEAMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGM 215
Query: 458 RPDSETFSIMTEAYAKEGMNDKVYAL 483
+PD T++ + A+A+ G D L
Sbjct: 216 QPDIVTYNTLARAFAQNGETDNAERL 241
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA---FVTLNQMKTLPNCQ 212
++GQP+ A + N M + G++ ++T +++ +C +D A + +N+M T N +
Sbjct: 373 RAGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCALRLYEKMNEMGTPLNLK 432
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIV 256
TY TLI +A + E L M+E V P T +V
Sbjct: 433 ----TYETLIWGYGEAKQPWKAEELLVTMEESGVAPEMSTIELV 472
>gi|302756087|ref|XP_002961467.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
gi|300170126|gb|EFJ36727.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
Length = 500
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 164/368 (44%), Gaps = 14/368 (3%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEM-VEEGIEPTPELYTA 184
+A ++F+ + + QP Y L+ K + + A ++ EM VE I+P +Y +
Sbjct: 64 RAWEIFQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNS 123
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
++ CR++ EA+ L++ C P V TY++LI+ A + +L T++ M ER
Sbjct: 124 IVDGLCRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLER 183
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ P V+ ++++ G KAG RV+ M E+ C+ +V T++ G +D
Sbjct: 184 KIQPTIVSYSVIIDGLSKAGRVYDAYRVVREM-ETLGCELNVVIYTTLIDGLCKSGFLDD 242
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
Y + G P RT+ LI + + + + +++R P + Y V+
Sbjct: 243 AYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRD-YCPLDVAMYTAVVS 301
Query: 365 AFS---DMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV-RLASKL 420
+ DA+ + F +M G+ ADT + L++G +G + + L
Sbjct: 302 GLCRERRLDDARAL---FREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEELGDDP 358
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
N+ YN VI+ C ++ ++ M+++ PD T+S + + G +
Sbjct: 359 GCVANLLTYNTVIAGCCLESGMV----LFYEMRQRGIAPDFATYSALIDRLLGSGEIRRA 414
Query: 481 YALEQEKL 488
+ L +E L
Sbjct: 415 FDLCEEML 422
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 144/354 (40%), Gaps = 18/354 (5%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P + + L+ L KS + A + M + GI P +TAL+ +C+N +++ A+
Sbjct: 9 PNQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEI 68
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD-ERSVTPNTVTQNIVLGGY 260
+M CQPD + Y LI +R + L ++M ER + P+ V N ++ G
Sbjct: 69 FQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGL 128
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
++ F + + L + C P V T +++ ++ + + I P
Sbjct: 129 CRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQPT 188
Query: 321 TRTFNILIGAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+++++I K R+YD V E M L Y +I+ G +
Sbjct: 189 IVSYSVIIDGLSKAGRVYDAYRVVRE-METLGCELNVVIYTTLIDGLCKSGFLDDAYALY 247
Query: 380 EQMHAEGMKADTKTFCCLINGYAN-------AGLFHKVISSVRLASKLQIAENVSFYNAV 432
M G + +T+ LI+ + GLF + L +V+ Y AV
Sbjct: 248 RIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDYCPL--------DVAMYTAV 299
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+S + L + +++ M+ D+ ++++ + G +++ + + +E
Sbjct: 300 VSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEE 353
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 167/412 (40%), Gaps = 44/412 (10%)
Query: 93 NLKKKLERKAKAKAWVNTVAET-FSDHVLKKQWF-QALQVFEMLKEQPFYQPKEGTYMKL 150
L KK++ K K TV T D +LK +A+ + E + E+ P TY +
Sbjct: 97 QLLKKMDEK---KCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKG-NSPTLKTYTVV 152
Query: 151 LVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM---KT 207
+ L K+G+ E AR++F +M+ G P +YTAL++ + +DEA V LNQM
Sbjct: 153 IDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGC 212
Query: 208 LPNCQPDV----------------------------------YTYSTLIKACVDAMRFEL 233
+PDV +T++ L+ A A R E
Sbjct: 213 ARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEE 272
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
+ M ER P T ++ G+ K G D+ L +E PD T +I+
Sbjct: 273 AIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGF-IPDAVTYTSII 331
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
G+V+ + + RN G +P+ T+ LI + K +M K V M +
Sbjct: 332 DGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTV 391
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
++ TYN +++ G TF M G A T+ L++G+ + G +
Sbjct: 392 VSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVEL 451
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
R N+ YN +I +A L + ++++ ++ PD TF+
Sbjct: 452 FRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFN 503
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 147/346 (42%), Gaps = 7/346 (2%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY + L K+ + + A ++ +M E+ PT YTAL+ + +DEA
Sbjct: 73 EPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMA 132
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L QM N P + TY+ +I A R E ++ DM P+ ++ G
Sbjct: 133 ILEQMVEKGN-SPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGL 191
Query: 261 GKAGMFDQMERVLSGMLESATCK---PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
K G D+ L+ M+E+ + PDV N ++ G ++ ++++ + +
Sbjct: 192 AKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDD-SL 250
Query: 318 DPETRTFNILIGAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME 376
D TFN L+ A K +R + ++ V + + FP T TY ++++ F +G
Sbjct: 251 DLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFP-TLFTYTSLVDGFLKLGRLDEAL 309
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
++ G D T+ +I+G G + + Y A+I
Sbjct: 310 LQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGF 369
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
+KA + + RVY++M + + T++I+ + K G + YA
Sbjct: 370 MKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYA 415
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 149/381 (39%), Gaps = 49/381 (12%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL L K+GQ + A + +EM P +T ++ CR +DEAF L +
Sbjct: 15 LLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVINGLCREKRLDEAFSVLER-AVRA 70
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
C+PD TY+ I A R + L + MDE+ P TVT ++ G KAG D+
Sbjct: 71 GCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEA 130
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+L M+E P + T ++ + G+V+ R + G P+ + LI
Sbjct: 131 MAILEQMVEKGN-SPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIS 189
Query: 330 AYGKKRMYDKMSSVMEYMRK--------------------LQFPWTSSTYNNVIEAFSDM 369
K K+ + Y+ + ++ S + + F ++
Sbjct: 190 GLAK---IGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL 246
Query: 370 GDAKHM-EYTFEQMHAEGMKADTK--------------------TFCCLINGYANAGLFH 408
D+ + +TF + A KA+ T+ L++G+ G
Sbjct: 247 DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLD 306
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ + ++ A + + Y ++I K + E + M+ + PD+ T++ +
Sbjct: 307 EALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALI 366
Query: 469 EAYAKEGMNDKVYALEQEKLQ 489
+ + K M K + + ++ LQ
Sbjct: 367 DGFMKAKMIPKAHRVYRQMLQ 387
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 7/161 (4%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ G A ++F M++ G EP Y ++ CR + +A+ ++
Sbjct: 431 TYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKL 490
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIET---LYQDMDERSVTPNTVTQNIVLGGYGK 262
C PDVYT+++ + R + + L++ M + +PN + +I++ G +
Sbjct: 491 LQRRLC-PDVYTFNSFLHGL--CQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICR 547
Query: 263 AGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
AG + + M+ PDV NT++ G+VD
Sbjct: 548 AGGLEVTLEIFHEMVSRGV-APDVVVFNTLIRWLCIAGRVD 587
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+++FE + Q P +Y L+ + ++G E+ ++F+EMV G+ P ++ L
Sbjct: 518 DGVELFESMVSQG-TSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTL 576
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C +DEA +++ PD ++Y +L+ A R E L M +
Sbjct: 577 IRWLCIAGRVDEALEVFRELER--RSAPDAWSYWSLLDALSRCERMEEARLLSFHMKLQG 634
Query: 246 VTP 248
P
Sbjct: 635 CAP 637
>gi|297725255|ref|NP_001174991.1| Os06g0710800 [Oryza sativa Japonica Group]
gi|53792631|dbj|BAD53645.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|215693375|dbj|BAG88757.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677390|dbj|BAH93719.1| Os06g0710800 [Oryza sativa Japonica Group]
Length = 492
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 151/346 (43%), Gaps = 2/346 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P Y LL L + LA ++ +M ++G+ Y LL AY R +++++
Sbjct: 118 RPDAAHYNALLEGLLSTAHLRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWW 177
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +MK + D YSTL++ D ++ L +M E V + N ++ +
Sbjct: 178 VLGEMKR-RGIRLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTF 236
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
GK G +V M KPD+ T N+++ G R++ + G+ P+
Sbjct: 237 GKYGQLADARKVFDKMCAEGV-KPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPD 295
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+ F +I G++ +D++ + MR + + Y +++ + G +
Sbjct: 296 PKIFVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVA 355
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+ AE ++ FC L N YA GL + ++ ++L I N+ N +I+A A
Sbjct: 356 ALKAENLQLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAG 415
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+E V + +K+ PD T++ + +A+ + +KV + +E
Sbjct: 416 RHLEALAVLQHIKDSGMSPDVVTYTTLMKAFMRAKKFEKVSEVYKE 461
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/319 (19%), Positives = 113/319 (35%), Gaps = 72/319 (22%)
Query: 165 KVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
++ +M G+ P+ Y L+ A R EA L +M+ L +PD Y+ L++
Sbjct: 72 RLLADMQAAGLRPSGAAYARLIRALARAGRTLEAEALLLEMRRL-GLRPDAAHYNALLEG 130
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
+ L + L M + V N T ++L Y + +G LE +
Sbjct: 131 LLSTAHLRLADRLLLQMADDGVARNRRTYMLLLNAYAR-----------AGRLEDSW--- 176
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
W + + + GI +T ++ L+ Y M+ K + ++
Sbjct: 177 --WVLG--------------------EMKRRGIRLDTAGYSTLVRLYRDNGMWKKATDLI 214
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
M++L YN +I+ F G F++M AEG+K D T+ LI +
Sbjct: 215 MEMQELGVELDVKIYNGLIDTFGKYGQLADARKVFDKMCAEGVKPDITTWNSLIRWHCRV 274
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
G + + R + M+E+ PD + F
Sbjct: 275 GNTKRAL-----------------------------------RFFAAMQEEGMYPDPKIF 299
Query: 465 SIMTEAYAKEGMNDKVYAL 483
+ ++G D++ L
Sbjct: 300 VTIISRLGEQGKWDEIKKL 318
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 173/409 (42%), Gaps = 48/409 (11%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL++F + ++P + P+ Y ++L+ LG+SG + RK+ +M G E + L+
Sbjct: 66 ALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILI 125
Query: 187 AAYCRNSLIDEA--------------------------FVTLNQMKTLP---------NC 211
+Y + L DE V N +K +
Sbjct: 126 ESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGI 185
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
+PDV T++ LIKA A + + +DM + P+ T ++ GY + G D R
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALR 245
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRN-FGIDPETRTFNILIGA 330
+ M+E C ++N I+ F +G+V+ + ++ N G P+ TFN L+
Sbjct: 246 IREQMVEFG-CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
K +M+ M + + TYN+VI +G+ K +QM +
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPN 364
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA-CIKADDLMEMERVY 449
T T+ LI+ + R+ + I +V +N++I C+ + + ME ++
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME-LF 423
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQML--LEASG 496
+ M+ K C PD T++++ ++ +G D E L ML +E SG
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLD-------EALNMLKQMELSG 465
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 159/354 (44%), Gaps = 10/354 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
A+++ +++ ++ Y P TY ++ L K G+ + A + ++M+ P Y L
Sbjct: 313 HAIEIMDVMLQEG-YDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTL 371
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
++ C+ + ++EA L ++ T PDV T+++LI+ + L+++M +
Sbjct: 372 ISTLCKENQVEEA-TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG 430
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ T N+++ G D+ +L M E + C V T NT++ F ++
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLDEALNMLKQM-ELSGCARSVITYNTLIDGFCKANKIREA 489
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E +++ G+ + T+N LI K R + S +M+ M TYN+++
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTH 549
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG---LFHKVISSVRLASKLQI 422
F GD K + M + G + D T+ LI+G AG + K++ S+++ I
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG---I 606
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKH-CRPDSETFSIMTEAYAKEG 475
A YN VI + E +++ M E++ PD+ ++ I+ G
Sbjct: 607 ALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGG 660
>gi|297803426|ref|XP_002869597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315433|gb|EFH45856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 538
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 156/354 (44%), Gaps = 24/354 (6%)
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE--EGIEPTPELYTALLA 187
V L + ++ E +LV +G +L KVF+ ++ + TP ++ +L
Sbjct: 121 VLHTLTKNRKFKSAESILRDVLV----NGGVDLPAKVFDALLYSYRECDSTPRVFDSLFK 176
Query: 188 AYCRNSLIDEAFVTLNQMKT---LPNCQP-DVYTYSTLIKACVD-AMRFELIETLYQDMD 242
+ A T QMK LP + + Y S L + VD A+RF Y++M
Sbjct: 177 TFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRF------YREMR 230
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
++PNT T N+V+ GY ++G D+ +L M E + + NT+++ KG +
Sbjct: 231 RCKISPNTYTLNMVMSGYCRSGKLDKGIELLQDM-ERLGFRATHVSYNTLIAGHCEKGLL 289
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ G+ P TFN LI + + + S V M+ L P + TYN +
Sbjct: 290 SSALKLKNMMGKNGLQPNVVTFNTLIHGFCRAVKLQEASKVFGEMKALNLPPNTVTYNTL 349
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I +S GD + +E M G++ D T+ LI G K V+ K +
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNTLILGLCKQAKTRKAAQFVKELDKENL 409
Query: 423 AENVSFYNAVI-SACIK--ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
N S ++A+I C++ AD E+ YK M C P+ +TF+I+ A+ K
Sbjct: 410 VPNSSTFSALIMGQCVRRNADRGFEL---YKSMIRSGCHPNEQTFNILISAFCK 460
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 116/262 (44%), Gaps = 4/262 (1%)
Query: 146 TYMKLLVLLG--KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLN 203
TY +V+ G +SG+ + ++ +M G T Y L+A +C L+ A + L
Sbjct: 238 TYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATHVSYNTLIAGHCEKGLLSSA-LKLK 296
Query: 204 QMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKA 263
M QP+V T++TLI A++ + ++ +M ++ PNTVT N ++ GY +
Sbjct: 297 NMMGKNGLQPNVVTFNTLIHGFCRAVKLQEASKVFGEMKALNLPPNTVTYNTLINGYSQQ 356
Query: 264 GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
G + R M+ + + D+ T NT++ + + ++ ++ + P + T
Sbjct: 357 GDHEMAFRFYEDMVCNGI-QRDILTYNTLILGLCKQAKTRKAAQFVKELDKENLVPNSST 415
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
F+ LI +R D+ + + M + T+N +I AF D +M
Sbjct: 416 FSALIMGQCVRRNADRGFELYKSMIRSGCHPNEQTFNILISAFCKNEDFDGAAQVLREMV 475
Query: 384 AEGMKADTKTFCCLINGYANAG 405
+ D++T + NG + G
Sbjct: 476 RRSIPLDSRTVHQVCNGLNHQG 497
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 98/239 (41%), Gaps = 6/239 (2%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H K AL++ M+ + QP T+ L+ ++ + + A KVF EM + P
Sbjct: 283 HCEKGLLSSALKLKNMMGKNGL-QPNVVTFNTLIHGFCRAVKLQEASKVFGEMKALNLPP 341
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
Y L+ Y + + AF M Q D+ TY+TLI +
Sbjct: 342 NTVTYNTLINGYSQQGDHEMAFRFYEDM-VCNGIQRDILTYNTLILGLCKQAKTRKAAQF 400
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
+++D+ ++ PN+ T + ++ G D+ + M+ S C P+ T N ++S F
Sbjct: 401 VKELDKENLVPNSSTFSALIMGQCVRRNADRGFELYKSMIRSG-CHPNEQTFNILISAFC 459
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY---GKKRMYDKMSSVMEYMRKLQFP 353
D + + I ++RT + + GK ++ ++ ME + LQ P
Sbjct: 460 KNEDFDGAAQVLREMVRRSIPLDSRTVHQVCNGLNHQGKDQLVKELLQEMEGKKFLQEP 518
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 138/327 (42%), Gaps = 7/327 (2%)
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
G +G + EMVE GI PT + L+ YC+NS A +MK
Sbjct: 240 GGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQ-QGIAAS 298
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
V TY++LI + E L ++M++ ++PN +T VL G+ K GM +
Sbjct: 299 VVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWID 358
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
GM E +PDV N ++ V+ G+++ E GI P T+N LI + +
Sbjct: 359 GMTER-NVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRS 417
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
+ S +++ M++ TYN +I A G+ + ++M G++ + T+
Sbjct: 418 GDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTY 477
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
+I G+ + G K + NV YN I + + E + M +
Sbjct: 478 NTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLD 537
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDKVY 481
K P+ T+ + KEGM +K Y
Sbjct: 538 KCLVPNGITYETI-----KEGMMEKGY 559
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 171/419 (40%), Gaps = 41/419 (9%)
Query: 123 QWFQALQVFEMLKE-QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
Q +A F + E P ++P + LL L + + +LA K F + + P
Sbjct: 134 QPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYT 193
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV---DAMRFELIETLY 238
+ +++ CR + +A +K P V TY++LI A ++ L
Sbjct: 194 FNTVISGLCRIGQLRKAGDVAKDIKAW-GLAPSVATYNSLIDGYCKKGGAGNMYHVDMLL 252
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAG-------MFDQMER------------VLSGM--- 276
++M E ++P VT +++ GY K +F++M++ ++SG+
Sbjct: 253 KEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSE 312
Query: 277 ------------LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
+E P+ T +L F KG + W + ++P+ +
Sbjct: 313 GKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIY 372
Query: 325 NILIGAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
NILI Y + +M D M+ V E M K +TYN +I FS GD + ++M
Sbjct: 373 NILIDVYRRLGKMEDAMA-VKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK 431
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
+G++AD T+ LI G K + + S++ + N YN +I ++
Sbjct: 432 EKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIK 491
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGHWQQNI 502
+ RM++ R + T+++ + + + G D+ L E L L +G + I
Sbjct: 492 SAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI 550
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 158/345 (45%), Gaps = 4/345 (1%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+Q +Y L+ L K G+ + A ++ + E I+P +Y ++ + C+N L+ EA
Sbjct: 170 FQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEAC 229
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
++M P+V TY+TLI C+ E + L +M +++ P+ T +I++
Sbjct: 230 NLYSEMNA-KQIYPNVVTYTTLIYGFCIMGCLIEAV-ALLNEMKLKNINPDVYTFSILID 287
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
GK G + VL+ M++ A KPDV T N+++ + +V + + G+
Sbjct: 288 ALGKEGKMKAAKIVLAVMMK-AYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVT 346
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P +++ I+I K +M D+ S+ E M+ + T+N++I+ G ++
Sbjct: 347 PGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDL 406
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
++M AD T+ LI+ + I+ + +I ++ Y +I K
Sbjct: 407 VDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCK 466
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
L + V++ + K D T+++M + K G+ D+ AL
Sbjct: 467 GGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALAL 511
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 139/326 (42%), Gaps = 2/326 (0%)
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
GQ L+ V +++ G P T L+ C + +A + + L Q D +
Sbjct: 118 GQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEF-QLDRIS 176
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y TLI + L ++++ERS+ P+ V NI++ K + + + S M
Sbjct: 177 YGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEM- 235
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
+ P+V T T++ F G + + + I+P+ TF+ILI A GK+
Sbjct: 236 NAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKM 295
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
V+ M K TYN++++ + + + KH +Y F M G+ +++ +
Sbjct: 296 KAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIM 355
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
I+G + + IS + N +N++I K+ + + + +M+++
Sbjct: 356 IDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQ 415
Query: 458 RPDSETFSIMTEAYAKEGMNDKVYAL 483
D T+S + +A K D+ AL
Sbjct: 416 LADVITYSSLIDALCKNCHLDQAIAL 441
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 157/396 (39%), Gaps = 71/396 (17%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A+Q+ L+E+ +P Y ++ L K+ A +++EM + I P YT L+
Sbjct: 193 AIQLMRNLEERSI-KPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLI 251
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+C + EA LN+MK L N PDVYT+S LI A + + + + M + V
Sbjct: 252 YGFCIMGCLIEAVALLNEMK-LKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYV 310
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT--------------CK--------- 283
P+ VT N ++ GY + V + M +S CK
Sbjct: 311 KPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAIS 370
Query: 284 -----------PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
P+ T N+++ G++ + +K R+ + T++ LI A
Sbjct: 371 LFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALC 430
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K D+ ++ + M + TY +I+ G K + F+ + +G D +
Sbjct: 431 KNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIR 490
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
T+ +I+G+ AGLF + ++ + +M
Sbjct: 491 TYTVMISGFCKAGLFDEALA-----------------------------------LLSKM 515
Query: 453 KEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
++ C P++ TF I+ A ++ NDK L +E +
Sbjct: 516 EDNGCIPNAITFDIIICALFEKDENDKAEKLLREMI 551
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/309 (19%), Positives = 121/309 (39%), Gaps = 36/309 (11%)
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
P + ++ ++ + V RF +L + +D + +T + VT NI++ + G V
Sbjct: 67 PPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSV 126
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK--------------------- 311
L+ +L+ PDV T+ T++ +G+V ++++
Sbjct: 127 LATILKRGY-HPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLC 185
Query: 312 -----------FRNF---GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
RN I P+ +NI+I + K ++ + ++ M Q
Sbjct: 186 KIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVV 245
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
TY +I F MG +M + + D TF LI+ G + +
Sbjct: 246 TYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVM 305
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
K + +V YN+++ +++ + V+ M + P ++++IM + K M
Sbjct: 306 MKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMV 365
Query: 478 DKVYALEQE 486
D+ +L +E
Sbjct: 366 DEAISLFEE 374
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 148/351 (42%), Gaps = 3/351 (0%)
Query: 126 QALQVFEMLKEQ-PFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
QA ++ M+ E P Y ++ K G A +FNEMV+ GI P Y
Sbjct: 197 QADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNC 256
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
++ A C+ +D+A L QM PD +TY++LI +++ + + M +
Sbjct: 257 VVNALCKARAMDKAEAILRQMVD-KGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQ 315
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ P+ VT N ++ K G V M K D+++ +L+ +A KG +
Sbjct: 316 GILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQ-KTDIFSYKIMLNGYATKGCLVD 374
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ + + GI P++ FN+LI AY K M D+ + + MR+ TY+ VI
Sbjct: 375 LTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIA 434
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
A +G F QM +G+ T+ LI G+ G K V +
Sbjct: 435 ALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRP 494
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++ +N +I+ K +M+ + ++ P+ ++ + + Y G
Sbjct: 495 DIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVG 545
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 151/348 (43%), Gaps = 6/348 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF-V 200
P TY L+ ++ +P+L F ++++ G+ + + LL C EA +
Sbjct: 106 PTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDI 165
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVT-PNTVTQNIVLG 258
L++M L C PDV++Y ++K+ C D + E L + +V PN V N V+
Sbjct: 166 LLHRMPHL-GCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVID 224
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
G+ K G ++ + + M++ PD+ T N +++ +D E + + G+
Sbjct: 225 GFFKEGDVNKACDLFNEMVQRGI-SPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVL 283
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P+ T+N LI Y + + V + M T N+++ + G K
Sbjct: 284 PDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDV 343
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
F+ M +G K D ++ ++NGYA G + L IA + +N +I A K
Sbjct: 344 FDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAK 403
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALEQ 485
L ++ M+E+ PD T+S + A + G M+D V Q
Sbjct: 404 CGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQ 451
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 150/364 (41%), Gaps = 3/364 (0%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
QW +A++V + + Q P T L+ L K G+ + AR VF+ M +G + Y
Sbjct: 301 QWKEAVRVSKKMTSQGIL-PDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSY 359
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
+L Y + + N M + PD + ++ LIKA + ++ +M
Sbjct: 360 KIMLNGYATKGCLVDLTELFNLMLS-DGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMR 418
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
E+ V P+ VT + V+ + G D + M++ P + T + ++ F G +
Sbjct: 419 EQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGV-APSISTYHFLIQGFCTHGDL 477
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ + N G+ P+ FN +I K ++ ++ + YN +
Sbjct: 478 LKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTL 537
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
++ + +G ++ F+ M + G++ + + L+NGY G + +S R I
Sbjct: 538 MDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGI 597
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
+ + YN ++ +A + + + M E D T+SI+ K +D+
Sbjct: 598 KPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAIL 657
Query: 483 LEQE 486
L +E
Sbjct: 658 LFKE 661
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/422 (21%), Positives = 172/422 (40%), Gaps = 10/422 (2%)
Query: 60 AVAAKKRLWKEGEYPGV-SETSIPGYRSKRTPIKNLKKKLERKA--KAKAWVNTVAETFS 116
AV K++ +G P V + S+ K IK+ + + A K + + +
Sbjct: 305 AVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLN 364
Query: 117 DHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIE 176
+ K ++F ++ P + L+ K G + A +FNEM E+G+E
Sbjct: 365 GYATKGCLVDLTELFNLMLSDGI-APDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVE 423
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIE 235
P Y+ ++AA CR +D+A NQM P + TY LI+ C + +
Sbjct: 424 PDVVTYSTVIAALCRIGKMDDAVEKFNQMID-QGVAPSISTYHFLIQGFCTHGDLLKAKD 482
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
+ Q M+ + + P+ N ++ K G + + + S P+V NT++
Sbjct: 483 LVLQMMN-KGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTI-SIGLHPNVMVYNTLMDG 540
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK-KRMYDKMSSVMEYMRKLQFPW 354
+ G+++ R ++ + GI P + L+ Y K R+ + +S E + K P
Sbjct: 541 YCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPS 600
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
T + YN ++ G + F +M G+ D T+ ++ G + I
Sbjct: 601 T-TLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLF 659
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
+ + + +++ N +I+ + + E + ++ + P T+SIM KE
Sbjct: 660 KELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKE 719
Query: 475 GM 476
G+
Sbjct: 720 GL 721
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 174/381 (45%), Gaps = 17/381 (4%)
Query: 125 FQALQVFEMLKEQPF---------YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
F+ L V L++ PF + +Y L+ LL KS A +V+ M+ +G
Sbjct: 162 FKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGF 221
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
P+ + Y++L+ + I+ L +M+TL +P+VYT++ I+ A +
Sbjct: 222 RPSLQTYSSLMVGLGKRRDIESVMGLLKEMETL-GLKPNVYTFTICIRVLGRAGKINEAY 280
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
+ + MD+ P+ VT +++ A D + V + M ++ KPD T T+L
Sbjct: 281 EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKM-KTGRHKPDRVTYITLLDR 339
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
F++ +D + +++ + G P+ TF IL+ A K + + + ++ MR
Sbjct: 340 FSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPN 399
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
TYN +I + F+ M + G+K T+ I+ Y +G +S++
Sbjct: 400 LHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSG---DSVSALE 456
Query: 416 LASKLQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
K++ IA N+ NA + + KA E ++++ +K+ PDS T+++M + Y+
Sbjct: 457 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 516
Query: 473 KEGMNDKVYALEQEKLQMLLE 493
K G D+ L E ++ E
Sbjct: 517 KVGEIDEAIKLLSEMVENCCE 537
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 149/328 (45%), Gaps = 9/328 (2%)
Query: 163 ARKVFNEMVEE-GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
AR +F + ++ G++P Y L+ +I+ A Q+K C PDV TY+ L
Sbjct: 770 ARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKN-TGCIPDVATYNFL 828
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
+ A + + + + +Y++M PNT+T NIV+ G KAG D + ++
Sbjct: 829 LDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRD 888
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
P T ++ + G++ ++ +E ++G P +NILI +GK D
Sbjct: 889 FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAAC 948
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
++ + M K TY+ +++ +G + F ++ G+ D + +ING
Sbjct: 949 ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGL 1008
Query: 402 ANAGLFHKVISSVRLASKLQ----IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
G FH++ ++ L ++++ I ++ YN++I A + E ++Y ++
Sbjct: 1009 ---GKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGL 1065
Query: 458 RPDSETFSIMTEAYAKEGMNDKVYALEQ 485
P+ TF+ + Y+ G + YA+ Q
Sbjct: 1066 EPNVFTFNALIRGYSLSGKPEHAYAVYQ 1093
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 165/403 (40%), Gaps = 50/403 (12%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
AL+ FE +K + P L L K+G+ A+++F + + G+ P Y +
Sbjct: 453 SALETFEKMKTKGI-APNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMM 511
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNC-QPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
+ Y + IDEA L++M + NC +PDV ++LI A R + ++ M E
Sbjct: 512 MKCYSKVGEIDEAIKLLSEM--VENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEM 569
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ P VT N +L G GK G + + GM++ C P+ T NT+ +V +
Sbjct: 570 KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG-CPPNTITFNTLFDCLCKNDEVTL 628
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP---WTSSTYNN 361
+ K + G P+ T+N +I K + M+KL +P +
Sbjct: 629 ALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPG 688
Query: 362 VIEA---------------------------------FSDMGDAKHMEYTFEQMHAEGMK 388
V++A ++ G + ++ E++ A G+
Sbjct: 689 VVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFS-ERLVANGIC 747
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRL-----ASKLQIAENVSFYNAVISACIKADDLM 443
D + I Y+ H S R+ L + + YN +I ++AD +
Sbjct: 748 RDGDSILVPIIRYS---FKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIE 804
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ V+ ++K C PD T++ + +AY K G D+++ + +E
Sbjct: 805 IAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKE 847
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 161/400 (40%), Gaps = 50/400 (12%)
Query: 118 HVLKKQWF--QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
H+L K F +A++V+ + F +P TY L+V LGK E + EM G+
Sbjct: 198 HLLLKSRFCTEAMEVYRRMILDGF-RPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGL 256
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
+P +T + R I+EA+ L +M C PDV TY+ LI A A + + +
Sbjct: 257 KPNVYTFTICIRVLGRAGKINEAYEILKRMDD-EGCGPDVVTYTVLIDALCTARKLDCAK 315
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
++ M P+ VT +L + D + + S M E PDV T ++
Sbjct: 316 EVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEM-EKDGHVPDVVTFTILVDA 374
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
G + R+ GI P T+N LI + D + + M L T
Sbjct: 375 LCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPT 434
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA-------------------------- 389
+ TY I+ + GD+ TFE+M +G+
Sbjct: 435 AYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY 494
Query: 390 ---------DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN-----VSFYNAVISA 435
D+ T+ ++ Y+ G ++ +++L S ++ EN V N++I+
Sbjct: 495 GLKDIGLVPDSVTYNMMMKCYSKVG---EIDEAIKLLS--EMVENCCEPDVIVVNSLINT 549
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
KAD + E +++ RMKE +P T++ + K G
Sbjct: 550 LYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNG 589
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 118/265 (44%), Gaps = 2/265 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY LL GKSG+ + +++ EM EP + +++ + +D+A
Sbjct: 820 PDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDL 879
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ + + P TY LI + R + L++ M + PN NI++ G+G
Sbjct: 880 YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFG 939
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
KAG D + M++ +PD+ T + ++ G+VD ++ + + G++P+
Sbjct: 940 KAGEADAACALFKRMVKEGV-RPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDV 998
Query: 322 RTFNILIGAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+N++I GK R+ + + E + TYN++I G + +
Sbjct: 999 VCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYN 1058
Query: 381 QMHAEGMKADTKTFCCLINGYANAG 405
++ G++ + TF LI GY+ +G
Sbjct: 1059 EIQRAGLEPNVFTFNALIRGYSLSG 1083
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 139/333 (41%), Gaps = 16/333 (4%)
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
G+ E VF+ M + I+ Y + + +A L +M+ + Y+
Sbjct: 134 GKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREF-GFVLNAYS 192
Query: 218 YSTLI------KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
Y+ LI + C +AM +Y+ M P+ T + ++ G GK + +
Sbjct: 193 YNGLIHLLLKSRFCTEAME------VYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMG 246
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+L M E+ KP+V+T + V G+++ ++ + G P+ T+ +LI A
Sbjct: 247 LLKEM-ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL 305
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
R D V M+ + TY +++ FSD D + + +M +G D
Sbjct: 306 CTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDV 365
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
TF L++ AG F + + + + I N+ YN +I ++ L + ++
Sbjct: 366 VTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDN 425
Query: 452 MKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
M+ +P + T+ + + Y K G D V ALE
Sbjct: 426 MESLGVKPTAYTYIVFIDYYGKSG--DSVSALE 456
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 104/234 (44%), Gaps = 1/234 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
AL ++ L + P TY L+ L KSG+ A+++F M + G P +Y L
Sbjct: 875 DALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNIL 934
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + + D A +M +PD+ TYS L+ R + ++++ E
Sbjct: 935 INGFGKAGEADAACALFKRM-VKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESG 993
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+ V N+++ G GK ++ + + M +S PD++T N+++ G V+
Sbjct: 994 LNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEA 1053
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
+ Y + + G++P TFN LI Y + +V + M F + TY
Sbjct: 1054 GKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1107
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 56/132 (42%)
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
T+ T N ++EA G + M Y F+ M +K DT T+ + + G + ++
Sbjct: 119 TTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFAL 178
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
R + N YN +I +K+ E VY+RM RP +T+S + K
Sbjct: 179 RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKR 238
Query: 475 GMNDKVYALEQE 486
+ V L +E
Sbjct: 239 RDIESVMGLLKE 250
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F +K+ P TY L++ LG +G E A K++NE+ G+EP + AL
Sbjct: 1016 EALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNAL 1075
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
+ Y + + A+ M T P+ TY L
Sbjct: 1076 IRGYSLSGKPEHAYAVYQTMVT-GGFSPNTGTYEQL 1110
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 132/275 (48%), Gaps = 3/275 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL++F + + +P Y L+ L G A +V NEM EEG P + Y +
Sbjct: 344 RALELFNEAQAKGI-KPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 402
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ I +A V +N + PDV+T++TLI ++ + L + M E
Sbjct: 403 INGLCKMGNISDATVVMND-AIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 461
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+T+T N VL G KAG +++ M+ C P+ T N ++ F +++
Sbjct: 462 IAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKG-CHPNPITYNILIENFCRSNKMEEA 520
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ K G+ P+ +FN LI + + + + + + + + T+ T+N +I A
Sbjct: 521 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGA 580
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
FS + E F++M ++G +AD+ T+ LI+G
Sbjct: 581 FSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDG 615
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 136/331 (41%), Gaps = 2/331 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L K P+ A M+ +G P Y ++ YC+ S++ EA
Sbjct: 254 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 313
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L PD TY +LI E L+ + + + P+ V N ++ G
Sbjct: 314 LKD-AVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLC 372
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
G+ +V++ M E C PD+ T N +++ G + G P+
Sbjct: 373 LQGLILHALQVMNEMAEEG-CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDV 431
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
TFN LI Y K+ D ++E M + + TYN+V+ G + TF++
Sbjct: 432 FTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQE 491
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M +G + T+ LI + + + + S+ + + +N +I + D
Sbjct: 492 MILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGD 551
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
L ++++++EK ++TF+ + A++
Sbjct: 552 LEGAYLLFQKLEEKGYSATADTFNTLIGAFS 582
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 147/349 (42%), Gaps = 8/349 (2%)
Query: 127 ALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
A Q+F+ ML F P + K+L L K G A + ++++ G+ Y
Sbjct: 171 ARQLFDQMLHTHVF--PNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 228
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDER 244
+ C + EA ++ M+ PDV TY+TLI+ C +M E + L + M++
Sbjct: 229 IRGLCEAGRLPEAVRLVDGMRAYA--VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 286
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ P+ T N ++ GY K M + +L + PD T ++++ +G V+
Sbjct: 287 CL-PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFV-PDQVTYCSLINGLCAEGDVER 344
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ + + GI P+ +N L+ + + VM M + TYN VI
Sbjct: 345 ALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 404
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
MG+ +G D TF LI+GY + V + IA
Sbjct: 405 GLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAP 464
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ YN+V++ KA + E+ ++ M K C P+ T++I+ E + +
Sbjct: 465 DTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCR 513
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 138/352 (39%), Gaps = 25/352 (7%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P Y ++ L + + A KV+ M+ G+ P +T L ++C L +
Sbjct: 84 PAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFC---LTARPHIA 140
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L ++ LP+ Y T++ L+ M V PN N VL
Sbjct: 141 LRLLRALPH--RGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALC 198
Query: 262 KAGMFDQMER-VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G D +E +L G + +++T N + G++ R + R + + P+
Sbjct: 199 KRG--DVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PD 255
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ----FPWTSSTYNNVIEAFSDMGDAKHME 376
T+N LI KK M + M Y+R++ P TYN +I+ + + +
Sbjct: 256 VVTYNTLIRGLCKKSMPQE---AMHYLRRMMNQGCLP-DDFTYNTIIDGYCKISMVQEAT 311
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
+ +G D T+C LING G + + A I ++ YN+++
Sbjct: 312 ELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGL 371
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG--------MNDKV 480
++ +V M E+ C PD +T++I+ K G MND +
Sbjct: 372 CLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAI 423
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 141/352 (40%), Gaps = 11/352 (3%)
Query: 142 PKEGTYMKLLVLLG--KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
P G V+ G G AR++F++M+ + P + +L A C+ + EA
Sbjct: 148 PHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAG 207
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+ L ++ +++TY+ I+ +A R L M +V P+ VT N ++ G
Sbjct: 208 LLLGKV-IQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRG 265
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF---G 316
K M + L M+ C PD +T NTI+ + ++ M++ E ++ G
Sbjct: 266 LCKKSMPQEAMHYLRRMMNQG-CLPDDFTYNTIIDGYC---KISMVQEATELLKDAVFKG 321
Query: 317 IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME 376
P+ T+ LI + ++ + + YN++++ G H
Sbjct: 322 FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 381
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
+M EG D +T+ +ING G + A +V +N +I
Sbjct: 382 QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY 441
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
K L ++ +RM E PD+ T++ + K G ++V QE +
Sbjct: 442 CKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 493
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 95/261 (36%), Gaps = 10/261 (3%)
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y I+A A R ++ MD + P N ++ A DQ +V ML
Sbjct: 54 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
+A PD+ T L F + + R + G ++ G Y +
Sbjct: 114 -AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG---AVAYCTVVCGLYAHGHTH 169
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
D + + FP + +N V+ A GD ++ GM + T+
Sbjct: 170 DARQLFDQMLHTHVFP-NLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 228
Query: 398 INGYANAGLFHKVISSVRLASKLQI--AENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
I G AG ++ +VRL ++ +V YN +I K E +RM +
Sbjct: 229 IRGLCEAG---RLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ 285
Query: 456 HCRPDSETFSIMTEAYAKEGM 476
C PD T++ + + Y K M
Sbjct: 286 GCLPDDFTYNTIIDGYCKISM 306
>gi|224119538|ref|XP_002318099.1| predicted protein [Populus trichocarpa]
gi|222858772|gb|EEE96319.1| predicted protein [Populus trichocarpa]
Length = 426
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 153/325 (47%), Gaps = 3/325 (0%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
+ V+ K + A + F M +G++ +PE+ AL+ ++C L EA + +M+
Sbjct: 17 ITVMRKKGCTAKEAWEFFERMTRKGVKWSPEVLGALIKSFCDEGLKKEALIIQTEMER-R 75
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+ Y+TL+ + + + E E LY +M + + P + T NI++ Y + D +
Sbjct: 76 GISSNAIIYNTLMDSYSKSNQIEEAEGLYSEMQAKGLKPTSATFNILMDAYSRRMQPDII 135
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQV-DMMERWYEKFRNFGIDPETRTFNILI 328
E++L M + A P+ + ++S + + ++ DM + + + GI P + ++ LI
Sbjct: 136 EKLLLEM-QDAGLAPNAKSYTCLISAYGRQKKMSDMAADAFLRMKKAGIKPTSYSYTALI 194
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
AY ++K E M++ + TY +++AF GD K + ++ M E ++
Sbjct: 195 HAYSVSGWHEKAYITFENMQREGIKPSIETYTTLLDAFRRAGDTKTLMDIWKLMMREKVE 254
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
TF L++G+A G + + + K + V YN +++A + ++ ++
Sbjct: 255 GTRVTFNILLDGFAKQGHYMEARDVINEFKKFGLHPTVMTYNMLMNAYARGGQDSKLPQL 314
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAK 473
K M PDS T++ M AY +
Sbjct: 315 LKEMATLKLEPDSITYTTMIYAYVR 339
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 116/258 (44%), Gaps = 9/258 (3%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR----NSLID 196
+P T+ L+ + QP++ K+ EM + G+ P + YT L++AY R + +
Sbjct: 113 KPTSATFNILMDAYSRRMQPDIIEKLLLEMQDAGLAPNAKSYTCLISAYGRQKKMSDMAA 172
Query: 197 EAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIV 256
+AF+ + + +P Y+Y+ LI A + E +++M + P+ T +
Sbjct: 173 DAFLRMKK----AGIKPTSYSYTALIHAYSVSGWHEKAYITFENMQREGIKPSIETYTTL 228
Query: 257 LGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG 316
L + +AG + + M+ V T N +L FA +G +F+ FG
Sbjct: 229 LDAFRRAGDTKTLMDIWKLMMREKVEGTRV-TFNILLDGFAKQGHYMEARDVINEFKKFG 287
Query: 317 IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME 376
+ P T+N+L+ AY + K+ +++ M L+ S TY +I A+ + D +
Sbjct: 288 LHPTVMTYNMLMNAYARGGQDSKLPQLLKEMATLKLEPDSITYTTMIYAYVRVRDFRRAF 347
Query: 377 YTFEQMHAEGMKADTKTF 394
+ + M G D K++
Sbjct: 348 FYHKMMVKSGKVPDAKSY 365
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
FE+M +G+K + LI + + GL + + + I+ N YN ++ + K
Sbjct: 34 FERMTRKGVKWSPEVLGALIKSFCDEGLKKEALIIQTEMERRGISSNAIIYNTLMDSYSK 93
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
++ + E E +Y M+ K +P S TF+I+ +AY++ D + EKL + ++ +G
Sbjct: 94 SNQIEEAEGLYSEMQAKGLKPTSATFNILMDAYSRRMQPDII-----EKLLLEMQDAG 146
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 156/379 (41%), Gaps = 38/379 (10%)
Query: 133 MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRN 192
++ + P +P TY L+ L G+ A V ++M+ G P YT LL A C+
Sbjct: 146 LVADMPM-EPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKR 204
Query: 193 SLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVT 252
S +A L++M+ C PD+ TY+ ++ R + + + PNTV+
Sbjct: 205 SGYKQAMKLLDEMRA-KGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVS 263
Query: 253 QNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF 312
NIVL G A ++ E++++ M + P+V T N ++S +G V+ ++
Sbjct: 264 YNIVLKGLCTAERWEDAEKLMAEMSQKGY-PPNVVTFNMLISFLCRRGLVEPAMEVLDQI 322
Query: 313 RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM-RKLQFPWTSS-------------- 357
+G P + ++N ++ A+ K++ D+ + +E M + +P S
Sbjct: 323 PKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEV 382
Query: 358 --------------------TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
+YN VI+ + G K +M +G++ D T+ +
Sbjct: 383 DAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTI 442
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
+G + I + + I N YNA++ K + ++ M C
Sbjct: 443 SSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGC 502
Query: 458 RPDSETFSIMTEAYAKEGM 476
P+ T++I+ E EG+
Sbjct: 503 MPNESTYTILIEGLTYEGL 521
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 156/369 (42%), Gaps = 13/369 (3%)
Query: 119 VLKKQWFQALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
V + +AL++ E M +P P G L+ L SG+ AR+V EP
Sbjct: 70 VRRGDLEEALRLVESMSGLEPSAAP--GPCAALIKKLCASGRTAEARRVL-----AACEP 122
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
Y A++A YC +D A + M +PD YTY+TLI+ R +
Sbjct: 123 DVMAYNAMVAGYCVTGQLDAARRLVADMPM----EPDSYTYNTLIRGLCGRGRTGNALVV 178
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
DM R P+ VT I+L K + Q ++L M + C PD+ T N +++
Sbjct: 179 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEM-RAKGCAPDIITYNVVVNGIC 237
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+G+VD + + + G +P T ++NI++ ++ +M M + +P
Sbjct: 238 QEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVV 297
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
T+N +I G + +Q+ G ++ ++ +++ + + ++ V L
Sbjct: 298 TFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELM 357
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
++ YN +++A + ++ + ++K+K C P +++ + + K G
Sbjct: 358 VSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKT 417
Query: 478 DKVYALEQE 486
+ L E
Sbjct: 418 KEALELLNE 426
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 157/366 (42%), Gaps = 6/366 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W +VFE + + +P + L+ L K G+ A KV + MV+ G+EP Y
Sbjct: 208 RWQDVGKVFEDMSRRGI-KPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTY 266
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM- 241
L+ + C+ + EA +M PDV TY+TLI + + + ++M
Sbjct: 267 NVLINSLCKEGSVREALTLRKEMDD-KGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMI 325
Query: 242 -DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
+ V P+ VT N V+ G K G Q +V M E C ++ T N ++ F
Sbjct: 326 QGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERG-CMCNLVTYNYLIGGFLRVH 384
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+V M ++ G++P++ T++ILI + K D+ + MR+ Y
Sbjct: 385 KVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYI 444
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
++ A G + F +M + D + +I+G +G V ++
Sbjct: 445 PLLAAMCQQGMMERAMGLFNEMD-KNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDE 503
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+A + Y+ +I+ K DL E ERV K+M PD F + + Y+ EG DKV
Sbjct: 504 GLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKV 563
Query: 481 YALEQE 486
L E
Sbjct: 564 LKLIHE 569
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 139/337 (41%), Gaps = 13/337 (3%)
Query: 146 TYMKLLVLLGKSGQPEL--ARKVFNEMVEEG---IEPTPELYTALLAAYCRNSLIDEAFV 200
+Y +L L + G L AR + +M E P YT ++ C + EA
Sbjct: 85 SYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGEAVA 144
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L M+ + DV TY TLI+ DA + L +M V PN V + +L GY
Sbjct: 145 LLRSMQA-SGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGY 203
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
++G + + +V M KPDV ++ +G+ + + G++P
Sbjct: 204 CRSGRWQDVGKVFEDMSRRGI-KPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPN 262
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS---DMGDAKHMEY 377
T+N+LI + K+ + ++ + M TYN +I S +M +A M +
Sbjct: 263 VVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEA--MSF 320
Query: 378 TFEQMHAEG-MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
E + + ++ D TF +I+G G + + + ++ N+ YN +I
Sbjct: 321 LEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGF 380
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
++ + + + PDS T+SI+ ++K
Sbjct: 381 LRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSK 417
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 5/182 (2%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ K + + A K M + GI+ Y LLAA C+ +++ A
Sbjct: 402 EPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMG 461
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
N+M NC D YST+I + + ++ L QDM + + P+ VT ++++ Y
Sbjct: 462 LFNEMDK--NCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMY 519
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR--NFGID 318
K G ++ ERVL M S PDV ++++ ++ +GQ D + + + R N D
Sbjct: 520 AKLGDLEEAERVLKQMTASGFV-PDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFD 578
Query: 319 PE 320
P+
Sbjct: 579 PK 580
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 92/249 (36%), Gaps = 23/249 (9%)
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCK-----PDV---WTMNTILSVFANKGQ------ 301
VL G+A + R L G + C PDV + NT+L+ +G
Sbjct: 45 VLFRRGRADAAALLNRRLRGAPVTEACSLLSALPDVRDAVSYNTVLAALCRRGGDHLRQA 104
Query: 302 ----VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
VDM + R P ++ ++ R + +++ M+
Sbjct: 105 RSLLVDMSREAHPAAR-----PNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVV 159
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
TY +I D + ++M G++ + + CL+ GY +G + V
Sbjct: 160 TYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDM 219
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
S+ I +V + +I K + +V M ++ P+ T++++ + KEG
Sbjct: 220 SRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSV 279
Query: 478 DKVYALEQE 486
+ L +E
Sbjct: 280 REALTLRKE 288
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 50/115 (43%)
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
M A G++AD T+ LI G +A + + + NV Y+ ++ +
Sbjct: 146 LRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCR 205
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
+ ++ +V++ M + +PD F+ + + KEG K ++ +Q LE
Sbjct: 206 SGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLE 260
>gi|302806226|ref|XP_002984863.1| hypothetical protein SELMODRAFT_121207 [Selaginella moellendorffii]
gi|300147449|gb|EFJ14113.1| hypothetical protein SELMODRAFT_121207 [Selaginella moellendorffii]
Length = 564
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 142/326 (43%), Gaps = 2/326 (0%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A F ++Q ++ TY +L +LG++ ++ + +EM+ EG EP Y L+
Sbjct: 50 AYNFFIWARKQAGFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLI 109
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
Y R + +D + N M+ + C+PD TY TLI A + LY+ M
Sbjct: 110 HCYGRANDLDSSLKLFNVMQMV-GCEPDRVTYCTLIDLQAKAGFHDAAMDLYRQMQHAGF 168
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P+T T +I++ GKAG + ++ M + P + T N I+ + A G+ DM
Sbjct: 169 RPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGY-APSLVTYNIIIDLHAKAGKFDMAL 227
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ Y + G P+ T+ I++ G + V E M + + + + +++ +
Sbjct: 228 KLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMW 287
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G+A+ F +M G++ + L++ Y + + + +K + +
Sbjct: 288 GKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGMAKWGLYPTL 347
Query: 427 SFYNAVISACIKADDLMEMERVYKRM 452
Y +++S+C E + ++ M
Sbjct: 348 QTYTSLLSSCAACRAAWEYDALFGLM 373
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 143/367 (38%), Gaps = 47/367 (12%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
EM++E +P TY +L+ G++ + + K+FN M G EP Y L+ +
Sbjct: 92 EMIREGC--EPNVVTYNRLIHCYGRANDLDSSLKLFNVMQMVGCEPDRVTYCTLIDLQAK 149
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
D A QM+ +PD +TYS +I A + L+ +M +R P+ V
Sbjct: 150 AGFHDAAMDLYRQMQH-AGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLV 208
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD-------M 304
T NI++ + KAG FD ++ S + E PD T I+ V N G ++
Sbjct: 209 TYNIIIDLHAKAGKFDMALKLYSDLQEVGY-APDRVTYGIIMEVLGNCGHIEDAEQVFEE 267
Query: 305 MER----------------------------WYEKFRNFGIDPETRTFNILIGAYGKKRM 336
MER W+ + + G+ P N L+ AY +
Sbjct: 268 MERAGWVADNPIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSF 327
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
YD V+ M K T TY +++ + + A + F M G A
Sbjct: 328 YDAAGGVLGGMAKWGLYPTLQTYTSLLSSCAACRAAWEYDALFGLMGGTGHPAHPFVCSL 387
Query: 397 LINGYANAGL--FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
L +G G+ F + L S+ F +++I +A + V++ E
Sbjct: 388 LASGEMVVGIRCFFDAMQFEELESRR------GFADSLIDFLHRAGKAVAAGSVWEVAAE 441
Query: 455 KHCRPDS 461
K+ P++
Sbjct: 442 KNLYPNA 448
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 97/231 (41%), Gaps = 7/231 (3%)
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
T +LG G+A FD + +L M+ C+P+V T N ++ + +D + +
Sbjct: 69 TYTTILGILGRAKSFDVLNNLLDEMIREG-CEPNVVTYNRLIHCYGRANDLDSSLKLFNV 127
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
+ G +P+ T+ LI K +D + M+ F + TY+ +I G
Sbjct: 128 MQMVGCEPDRVTYCTLIDLQAKAGFHDAAMDLYRQMQHAGFRPDTFTYSIIIHCLGKAGK 187
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSF 428
F +M G T+ +I+ +A AG F +++L S LQ A +
Sbjct: 188 LNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDM---ALKLYSDLQEVGYAPDRVT 244
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
Y ++ + + E+V++ M+ D+ F +M + + K G +K
Sbjct: 245 YGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEK 295
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 95/234 (40%), Gaps = 9/234 (3%)
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
V G + G D+ R L+G+ + + +N IL G W K
Sbjct: 8 VCGILNQHGWGDETVRALAGL----NANLNAYQVNEILKQQKEAGVAYNFFIWARK--QA 61
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G + T+ ++G G+ + +D ++++++ M + TYN +I + D
Sbjct: 62 GFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSS 121
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
F M G + D T+C LI+ A AG + R + Y+ +I
Sbjct: 122 LKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMDLYRQMQHAGFRPDTFTYSIIIHC 181
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND---KVYALEQE 486
KA L +++ M ++ P T++I+ + +AK G D K+Y+ QE
Sbjct: 182 LGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQE 235
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 77/198 (38%)
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
+ A K DV T TIL + D++ ++ G +P T+N LI YG+
Sbjct: 59 KQAGFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDL 118
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
D + M+ + TY +I+ + G + QM G + DT T+ +
Sbjct: 119 DSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMDLYRQMQHAGFRPDTFTYSII 178
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
I+ AG + + A ++ YN +I KA ++Y ++E
Sbjct: 179 IHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGY 238
Query: 458 RPDSETFSIMTEAYAKEG 475
PD T+ I+ E G
Sbjct: 239 APDRVTYGIIMEVLGNCG 256
>gi|225430029|ref|XP_002281569.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Vitis vinifera]
Length = 635
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 156/352 (44%), Gaps = 4/352 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMV-EEGIEPTPELYTA 184
+A++ F +KE +P T+ L+ G +G+PE ++K+ M +E + P Y
Sbjct: 160 EAMKYFWKMKESG-SKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNV 218
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ A+C I +A+ + +M QPD TY+T+ A E + +M
Sbjct: 219 LVRAWCNKKNIMKAWNVVYKM-VASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNS 277
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+V PN T I++GGY K G + + + M + +P++ N+++ F + D
Sbjct: 278 NVQPNERTCCIIIGGYCKEGKIKEALQFVYRM-KDLGLQPNLVVFNSLIKGFIDAVDRDG 336
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ FG+ P+ TF+ ++ A+ DK + + M K + + Y+ + +
Sbjct: 337 VNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAK 396
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
+ G+ + E M G + F +ING+ +AG I + IA
Sbjct: 397 GYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCECGIAP 456
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
N+ + +I +A + E V + M+E + +P+ T ++ EA+ G+
Sbjct: 457 NLKTFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTTLLLVAEAWRATGL 508
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 135/287 (47%), Gaps = 2/287 (0%)
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
+P + TY+TL+ A F+ I ++ ++E + P+++ N V+ + ++G + +
Sbjct: 104 KPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMK 163
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF-RNFGIDPETRTFNILIGA 330
M ES + KP T NT++ + G+ + ++ E ++ + P RT+N+L+ A
Sbjct: 164 YFWKMKESGS-KPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRA 222
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
+ K+ K +V+ M + TYN + A++ G+A E +M ++ +
Sbjct: 223 WCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPN 282
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
+T C +I GY G + + V L + N+ +N++I I A D + V
Sbjct: 283 ERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLT 342
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
M+E +PD TFS + A++ G DK + + ++ ++ H
Sbjct: 343 LMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAH 389
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 160/351 (45%), Gaps = 9/351 (2%)
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
KL+ ++ + G+P+ + + + ++E G +P+ YT LLAA D ++Q++
Sbjct: 77 KLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEE- 135
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
+PD ++ +I A ++ + + M E P T T N ++ GYG AG ++
Sbjct: 136 NGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEE 195
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF--GIDPETRTFNI 326
+++L M + +P++ T N ++ + NK ++M+ W ++ G+ P+ T+N
Sbjct: 196 SQKLLELMSQDENVRPNLRTYNVLVRAWCNKK--NIMKAWNVVYKMVASGLQPDAVTYNT 253
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
+ AY + + ++ M+ T +I + G K +M G
Sbjct: 254 IATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLG 313
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
++ + F LI G+ +A V + L + + +V ++ +++A A + +
Sbjct: 314 LQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCR 373
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
++ M + +PD+ +SI+ + Y + G +K +E L ++++ H
Sbjct: 374 EIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKA----EEILNAMIKSGFH 420
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 120/286 (41%), Gaps = 37/286 (12%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY + ++G+ A + EM ++P ++ YC+ I EA
Sbjct: 245 QPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQ 304
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ +MK L QP++ +++LIK +DA+ + + + M+E V P+ +T + ++ +
Sbjct: 305 FVYRMKDL-GLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAW 363
Query: 261 GKAG-------MFDQM----------------------------ERVLSGMLESATCKPD 285
AG +FD M E +L+ M++S P+
Sbjct: 364 SAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGF-HPN 422
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
V TI++ + + G+++ + +EK GI P +TF LI YG+ R K V++
Sbjct: 423 VVIFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVLQ 482
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
M + +T V EA+ G K + E M +T
Sbjct: 483 IMEEFNVQPEKTTLLLVAEAWRATGLKKEANRILSAVKNEEMTHET 528
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 2/200 (1%)
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
L +C+ V + ++++ KG+ ++ + G P T+ L+ A ++
Sbjct: 64 LSKTSCR-TVRSRTKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKH 122
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
+D + S++ + + S +N VI AFS+ G+ + F +M G K T TF
Sbjct: 123 FDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNT 182
Query: 397 LINGYANAGLFHKVISSVRLASKLQ-IAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
LI GY AG + + L S+ + + N+ YN ++ A ++M+ V +M
Sbjct: 183 LIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVAS 242
Query: 456 HCRPDSETFSIMTEAYAKEG 475
+PD+ T++ + AYA+ G
Sbjct: 243 GLQPDAVTYNTIATAYAQNG 262
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 132/275 (48%), Gaps = 3/275 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL++F + + +P Y L+ L G A +V NEM EEG P + Y +
Sbjct: 343 RALELFNEAQAKGI-KPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 401
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ I +A V +N + PDV+T++TLI ++ + L + M E
Sbjct: 402 INGLCKMGNISDATVVMND-AIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 460
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+T+T N VL G KAG +++ M+ C P+ T N ++ F +++
Sbjct: 461 IAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKG-CHPNPITYNILIENFCRSNKMEEA 519
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ K G+ P+ +FN LI + + + + + + + + T+ T+N +I A
Sbjct: 520 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGA 579
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
FS + E F++M ++G +AD+ T+ LI+G
Sbjct: 580 FSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDG 614
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 136/331 (41%), Gaps = 2/331 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L K P+ A M+ +G P Y ++ YC+ S++ EA
Sbjct: 253 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 312
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L PD TY +LI E L+ + + + P+ V N ++ G
Sbjct: 313 LKD-AVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLC 371
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
G+ +V++ M E C PD+ T N +++ G + G P+
Sbjct: 372 LQGLILHALQVMNEMAEEG-CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDV 430
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
TFN LI Y K+ D ++E M + + TYN+V+ G + TF++
Sbjct: 431 FTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQE 490
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M +G + T+ LI + + + + S+ + + +N +I + D
Sbjct: 491 MILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGD 550
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
L ++++++EK ++TF+ + A++
Sbjct: 551 LEGAYLLFQKLEEKGYSATADTFNTLIGAFS 581
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 147/349 (42%), Gaps = 8/349 (2%)
Query: 127 ALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
A Q+F+ ML F P + K+L L K G A + ++++ G+ Y
Sbjct: 170 ARQLFDQMLHTHVF--PNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 227
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDER 244
+ C + EA ++ M+ PDV TY+TLI+ C +M E + L + M++
Sbjct: 228 IRGLCEAGRLPEAVRLVDGMRAYA--VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 285
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ P+ T N ++ GY K M + +L + PD T ++++ +G V+
Sbjct: 286 CL-PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFV-PDQVTYCSLINGLCAEGDVER 343
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ + + GI P+ +N L+ + + VM M + TYN VI
Sbjct: 344 ALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 403
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
MG+ +G D TF LI+GY + V + IA
Sbjct: 404 GLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAP 463
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ YN+V++ KA + E+ ++ M K C P+ T++I+ E + +
Sbjct: 464 DTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCR 512
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 138/352 (39%), Gaps = 25/352 (7%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P Y ++ L + + A KV+ M+ G+ P +T L ++C L +
Sbjct: 83 PAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFC---LTARPHIA 139
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L ++ LP+ Y T++ L+ M V PN N VL
Sbjct: 140 LRLLRALPH--RGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALC 197
Query: 262 KAGMFDQMER-VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G D +E +L G + +++T N + G++ R + R + + P+
Sbjct: 198 KRG--DVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PD 254
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ----FPWTSSTYNNVIEAFSDMGDAKHME 376
T+N LI KK M + M Y+R++ P TYN +I+ + + +
Sbjct: 255 VVTYNTLIRGLCKKSMPQE---AMHYLRRMMNQGCLP-DDFTYNTIIDGYCKISMVQEAT 310
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
+ +G D T+C LING G + + A I ++ YN+++
Sbjct: 311 ELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGL 370
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG--------MNDKV 480
++ +V M E+ C PD +T++I+ K G MND +
Sbjct: 371 CLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAI 422
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 141/352 (40%), Gaps = 11/352 (3%)
Query: 142 PKEGTYMKLLVLLG--KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
P G V+ G G AR++F++M+ + P + +L A C+ + EA
Sbjct: 147 PHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAG 206
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+ L ++ +++TY+ I+ +A R L M +V P+ VT N ++ G
Sbjct: 207 LLLGKV-IQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRG 264
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF---G 316
K M + L M+ C PD +T NTI+ + ++ M++ E ++ G
Sbjct: 265 LCKKSMPQEAMHYLRRMMNQG-CLPDDFTYNTIIDGYC---KISMVQEATELLKDAVFKG 320
Query: 317 IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME 376
P+ T+ LI + ++ + + YN++++ G H
Sbjct: 321 FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 380
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
+M EG D +T+ +ING G + A +V +N +I
Sbjct: 381 QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY 440
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
K L ++ +RM E PD+ T++ + K G ++V QE +
Sbjct: 441 CKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 492
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 95/261 (36%), Gaps = 10/261 (3%)
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y I+A A R ++ MD + P N ++ A DQ +V ML
Sbjct: 53 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
+A PD+ T L F + + R + G ++ G Y +
Sbjct: 113 -AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG---AVAYCTVVCGLYAHGHTH 168
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
D + + FP + +N V+ A GD ++ GM + T+
Sbjct: 169 DARQLFDQMLHTHVFP-NLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 227
Query: 398 INGYANAGLFHKVISSVRLASKLQI--AENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
I G AG ++ +VRL ++ +V YN +I K E +RM +
Sbjct: 228 IRGLCEAG---RLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ 284
Query: 456 HCRPDSETFSIMTEAYAKEGM 476
C PD T++ + + Y K M
Sbjct: 285 GCLPDDFTYNTIIDGYCKISM 305
>gi|357457969|ref|XP_003599265.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488313|gb|AES69516.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 185
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 99/190 (52%), Gaps = 38/190 (20%)
Query: 170 MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM 229
M+ EG++PT +++ AL +AY MK++ + + DVY YS LI C
Sbjct: 1 MLFEGLKPTVDVFIALASAY--------------DMKSVADRKSDVYKYSVLISCCAKFR 46
Query: 230 RFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM 289
RF+LIE + DM + N VT N ++ GYGKA MF++ME L+ M+E+ C+PDV+T+
Sbjct: 47 RFDLIERVLADMSYLGIECNNVTYNSIIDGYGKADMFEKMENSLTDMIENENCQPDVFTL 106
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
N+++ + N ++D N +I G MYDK+ +V ++M +
Sbjct: 107 NSLIGSYGNGRKID---------------------NDMINFTG---MYDKIKTVTDFMER 142
Query: 350 LQFPWTSSTY 359
F T TY
Sbjct: 143 RFFAPTIVTY 152
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 11/124 (8%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y L+ K + +L +V +M GIE Y +++ Y + + ++ +L M
Sbjct: 35 YSVLISCCAKFRRFDLIERVLADMSYLGIECNNVTYNSIIDGYGKADMFEKMENSLTDMI 94
Query: 207 TLPNCQPDVYTYSTLIKACVDAMR-----------FELIETLYQDMDERSVTPNTVTQNI 255
NCQPDV+T ++LI + + + ++ I+T+ M+ R P VT I
Sbjct: 95 ENENCQPDVFTLNSLIGSYGNGRKIDNDMINFTGMYDKIKTVTDFMERRFFAPTIVTYEI 154
Query: 256 VLGG 259
G
Sbjct: 155 DTSG 158
>gi|147812173|emb|CAN61517.1| hypothetical protein VITISV_033966 [Vitis vinifera]
Length = 635
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 156/352 (44%), Gaps = 4/352 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMV-EEGIEPTPELYTA 184
+A++ F +KE +P T+ L+ G +G+PE ++K+ M +E + P Y
Sbjct: 160 EAMKYFWKMKESG-SKPTTSTFNTLIKGYGIAGEPEESQKLLZLMSQDENVRPNLRTYNV 218
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ A+C I +A+ + +M QPD TY+T+ A E + +M
Sbjct: 219 LVRAWCNKXNIMKAWNVVYKM-VASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNS 277
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+V PN T I++GGY K G + + + M + +P++ N+++ F + D
Sbjct: 278 NVQPNERTCCIIIGGYCKEGKIKEALQFVYRM-KDLGLQPNLVVFNSLIKGFIDAVDRDG 336
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ FG+ P+ TF+ ++ A+ DK + + M K + + Y+ + +
Sbjct: 337 VNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAK 396
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
+ G+ + E M G + F +ING+ +AG I + IA
Sbjct: 397 GYVRAGEPEKAEEILNAMIKSGFHPNVVMFTTIINGWCSAGRMEYAIKIFEKMCECGIAP 456
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
N+ + +I +A + E V + M+E + +P+ T ++ EA+ G+
Sbjct: 457 NLKTFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTTLLLVAEAWRATGL 508
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 134/287 (46%), Gaps = 2/287 (0%)
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
+P + TY+TL+ A F+ I ++ ++E + P+++ N V+ + ++G + +
Sbjct: 104 KPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMK 163
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF-RNFGIDPETRTFNILIGA 330
M ES + KP T NT++ + G+ + ++ Z ++ + P RT+N+L+ A
Sbjct: 164 YFWKMKESGS-KPTTSTFNTLIKGYGIAGEPEESQKLLZLMSQDENVRPNLRTYNVLVRA 222
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
+ K K +V+ M + TYN + A++ G+A E +M ++ +
Sbjct: 223 WCNKXNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPN 282
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
+T C +I GY G + + V L + N+ +N++I I A D + V
Sbjct: 283 ERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLT 342
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
M+E +PD TFS + A++ G DK + + ++ ++ H
Sbjct: 343 LMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAH 389
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 160/351 (45%), Gaps = 9/351 (2%)
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
KL+ ++ + G+P+ + + + ++E G +P+ YT LLAA D ++Q++
Sbjct: 77 KLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEE- 135
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
+PD ++ +I A ++ + + M E P T T N ++ GYG AG ++
Sbjct: 136 NGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEE 195
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF--GIDPETRTFNI 326
+++L M + +P++ T N ++ + NK ++M+ W ++ G+ P+ T+N
Sbjct: 196 SQKLLZLMSQDENVRPNLRTYNVLVRAWCNK--XNIMKAWNVVYKMVASGLQPDAVTYNT 253
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
+ AY + + ++ M+ T +I + G K +M G
Sbjct: 254 IATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLG 313
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
++ + F LI G+ +A V + L + + +V ++ +++A A + +
Sbjct: 314 LQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCR 373
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
++ M + +PD+ +SI+ + Y + G +K +E L ++++ H
Sbjct: 374 EIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKA----EEILNAMIKSGFH 420
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 2/200 (1%)
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
L +C+ V + ++++ KG+ ++ + G P T+ L+ A ++
Sbjct: 64 LSKTSCR-TVRSRTKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKH 122
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
+D + S++ + + S +N VI AFS+ G+ + F +M G K T TF
Sbjct: 123 FDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNT 182
Query: 397 LINGYANAGLFHKVISSVRLASKLQ-IAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
LI GY AG + + L S+ + + N+ YN ++ A ++M+ V +M
Sbjct: 183 LIKGYGIAGEPEESQKLLZLMSQDENVRPNLRTYNVLVRAWCNKXNIMKAWNVVYKMVAS 242
Query: 456 HCRPDSETFSIMTEAYAKEG 475
+PD+ T++ + AYA+ G
Sbjct: 243 GLQPDAVTYNTIATAYAQNG 262
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 1/136 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP Y L ++G+PE A ++ N M++ G P ++T ++ +C ++ A
Sbjct: 385 QPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVMFTTIINGWCSAGRMEYAIK 444
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M P++ T+ TLI +A + E + Q M+E +V P T +V +
Sbjct: 445 IFEKMCEC-GIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTTLLLVAEAW 503
Query: 261 GKAGMFDQMERVLSGM 276
G+ + R+LS +
Sbjct: 504 RATGLKKEANRILSAV 519
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 154/336 (45%), Gaps = 13/336 (3%)
Query: 159 QPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT-LNQMKTLPNCQPDVYT 217
Q +L R F E +P+ LY LL + + ++ FV+ L + L P YT
Sbjct: 97 QFQLVRSRFPEN-----KPSVYLYNLLLESCIKERRVE--FVSWLYKDMVLCGIAPQTYT 149
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
++ LI+A D+ + L+ +M E+ PN T I++ GY KAG+ D+ +L+ M
Sbjct: 150 FNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAM- 208
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY---GKK 334
ES P+ NTI+S F +G+ D E+ EK R G+ P+ TFN I A GK
Sbjct: 209 ESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKV 268
Query: 335 RMYDKMSSVMEYMRKLQFPWTSS-TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
++ S ME L P +S TYN +++ F +G + + FE + A ++
Sbjct: 269 LDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQS 328
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+ + G G F + + ++ + I ++ YN ++ K L + + + MK
Sbjct: 329 YNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMK 388
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
PD+ T+ + Y G D +L QE ++
Sbjct: 389 RNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMR 424
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 148/341 (43%), Gaps = 4/341 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P+ T+ L+ L S + AR++F+EM E+G +P + L+ YC+ L D+
Sbjct: 145 PQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL 204
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
LN M++ P+ Y+T++ + R + E + + M E + P+ VT N +
Sbjct: 205 LNAMESF-GVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALC 263
Query: 262 KAGMFDQMERVLSGM-LES--ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
K G R+ S M L+ +P+ T N +L F G ++ + +E R
Sbjct: 264 KEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDL 323
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
+++NI + + + + +V++ M + +YN +++ +G +
Sbjct: 324 ASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTI 383
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
M G+ D T+ CL++GY + G S ++ + N N ++ + K
Sbjct: 384 VGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWK 443
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ E E + ++M EK D+ T +I+ + G DK
Sbjct: 444 MGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDK 484
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 133/334 (39%), Gaps = 29/334 (8%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P +Y L+ L K G A+ + M G+ P Y LL YC +D A
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L +M NC P+ YT + L+ + R E L + M+E+ +TVT NI++ G
Sbjct: 419 LQEMMR-NNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLC 477
Query: 262 KAGMFDQMERVLSGM----------------------LESATCKPDVWTMNTILSVFANK 299
+G D+ ++ GM L C PD+ T +T+L+
Sbjct: 478 GSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKA 537
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G+ + + + + P++ +NI I + K+ V++ M K + TY
Sbjct: 538 GRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETY 597
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
N++I + ++M +G+ + T+ I Y G KV + L +
Sbjct: 598 NSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQ-YLCEG--EKVEDATNLLDE 654
Query: 420 L---QIAENVSFYNAVISACIKADDLMEMERVYK 450
+ IA NV + +I A K D + V++
Sbjct: 655 MMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFE 688
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 103/216 (47%), Gaps = 2/216 (0%)
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID--P 319
+A M ++++ + + +L S+ K + ++ +++S+FA +D ++ R+ + P
Sbjct: 51 RAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKP 110
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+N+L+ + K+R + +S + + M + T+N +I A D F
Sbjct: 111 SVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELF 170
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
++M +G K + TF L+ GY AGL K + + + N YN ++S+ +
Sbjct: 171 DEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCRE 230
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ E++ ++M+E+ PD TF+ A KEG
Sbjct: 231 GRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEG 266
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 106/253 (41%), Gaps = 9/253 (3%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
EM+ E+ QP Y + K G+ A +V +M ++G + E Y +L+
Sbjct: 549 EMMGEK--LQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGI 606
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
+ I E +++MK P++ TY+T I+ + + E L +M ++++ PN
Sbjct: 607 KNQIFEIHGLMDEMKE-KGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVF 665
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM--NTILSVFANKGQVDMMERWY 309
+ ++ + K FD + V + K ++++ N +L+ GQ+
Sbjct: 666 SFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAA----GQLLKATELL 721
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
E + G + T + L+ + KK + S ++ M + + + VI+ M
Sbjct: 722 EAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKM 781
Query: 370 GDAKHMEYTFEQM 382
G+ K ++M
Sbjct: 782 GNKKEANSFADKM 794
>gi|168061839|ref|XP_001782893.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665615|gb|EDQ52293.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 713
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 161/358 (44%), Gaps = 16/358 (4%)
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
+QVF+ ++ P +P E Y ++ +L + + +A VF E V+ G+ P+ + Y L++
Sbjct: 7 IQVFQWMQALPDLKPDELVYRTIINVLINARRMNVAEAVFEEFVKSGMSPSHDDYVILMS 66
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL--YQDMDERS 245
Y + + L +M+ P V Y+ +++ C + R ++ + ++ + +
Sbjct: 67 GYTKCGSLQRGIGILQKMRE-AGIHPQVSAYNVILEGCTRSTRGDINGMMEAHRILMDMG 125
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ ++VT NI++ + G ++R + ++ PD+ T + +++ F +
Sbjct: 126 LQQDSVTFNIIMNALNRVGRIRDVDRYWA-LMRMGRIVPDLTTCSILINAFGRARDWHKV 184
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR----------KLQFPWT 355
+ + +GI + +N LI YGK ++ ++ V++ +R +
Sbjct: 185 DLVLAEMETYGIKADLMIYNSLISVYGKAGLFYEVELVVKSLRAEIARREDLGNSSLAFD 244
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
TYN +++ + G + Y F +M G++ D TF L+N Y A + + +
Sbjct: 245 LVTYNTLLDVYGKAGRLDDVIYWFGEMKKSGVQPDVLTFDSLVNAYGKASHYDGEV--LE 302
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
L K ++ FYN ++ K + ++ + MK P SET++ + A+ +
Sbjct: 303 LFRKYNYKSDLVFYNTLLFMFGKGGHYADAWKILEDMKAAGFMPTSETYNSLILAFGR 360
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 177/426 (41%), Gaps = 83/426 (19%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNS-------- 193
P Y+ L+ K G + + +M E GI P Y +L R++
Sbjct: 56 PSHDDYVILMSGYTKCGSLQRGIGILQKMREAGIHPQVSAYNVILEGCTRSTRGDINGMM 115
Query: 194 -----LIDEAF----VTLNQMKTLPN-------------------CQPDVYTYSTLIKAC 225
L+D VT N + N PD+ T S LI A
Sbjct: 116 EAHRILMDMGLQQDSVTFNIIMNALNRVGRIRDVDRYWALMRMGRIVPDLTTCSILINAF 175
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM--------- 276
A + ++ + +M+ + + + N ++ YGKAG+F ++E V+ +
Sbjct: 176 GRARDWHKVDLVLAEMETYGIKADLMIYNSLISVYGKAGLFYEVELVVKSLRAEIARRED 235
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
L +++ D+ T NT+L V+ G++D + W+ + + G+ P+ TF+ L+ AYGK
Sbjct: 236 LGNSSLAFDLVTYNTLLDVYGKAGRLDDVIYWFGEMKKSGVQPDVLTFDSLVNAYGKASH 295
Query: 337 YDKMSSVMEYMRKLQF----------------------PW-------------TSSTYNN 361
YD V+E RK + W TS TYN+
Sbjct: 296 YD--GEVLELFRKYNYKSDLVFYNTLLFMFGKGGHYADAWKILEDMKAAGFMPTSETYNS 353
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+I AF + E T E+M A G+K ++F L+ Y+ +G K + +
Sbjct: 354 LILAFGRGSQWQEAENTLERMKANGVKPVAQSFSFLLEAYSLSGQIPKGEKLIVKMKEEN 413
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKV 480
+ ++ +N+++ ++A D+ + + Y+ + + +P+ +F M EA KE ++++
Sbjct: 414 LIYGIAGHNSLLRFYMRAGDIGSIIQTYETCQTRGPKPNQSSFVPMIEALTKENTVDERF 473
Query: 481 YALEQE 486
+ + Q+
Sbjct: 474 WGIAQD 479
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 137/292 (46%), Gaps = 20/292 (6%)
Query: 198 AFVTLNQ-MKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIV 256
AF+ + Q M+ LP+ +PD Y T+I ++A R + E ++++ + ++P+ I+
Sbjct: 5 AFIQVFQWMQALPDLKPDELVYRTIINVLINARRMNVAEAVFEEFVKSGMSPSHDDYVIL 64
Query: 257 LGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILS--VFANKGQVDMMERWYEKFRN 314
+ GY K G + +L M E A P V N IL + +G ++ M + +
Sbjct: 65 MSGYTKCGSLQRGIGILQKMRE-AGIHPQVSAYNVILEGCTRSTRGDINGMMEAHRILMD 123
Query: 315 FGIDPETRTFNILIGAY---GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
G+ ++ TFNI++ A G+ R D+ ++M R + T S +I AF D
Sbjct: 124 MGLQQDSVTFNIIMNALNRVGRIRDVDRYWALMRMGRIVPDLTTCSI---LINAFGRARD 180
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK---VISSVRL-------ASKLQ 421
++ +M G+KAD + LI+ Y AGLF++ V+ S+R
Sbjct: 181 WHKVDLVLAEMETYGIKADLMIYNSLISVYGKAGLFYEVELVVKSLRAEIARREDLGNSS 240
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+A ++ YN ++ KA L ++ + MK+ +PD TF + AY K
Sbjct: 241 LAFDLVTYNTLLDVYGKAGRLDDVIYWFGEMKKSGVQPDVLTFDSLVNAYGK 292
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 9/204 (4%)
Query: 129 QVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAA 188
+V E+ ++ Y+ Y LL + GK G A K+ +M G PT E Y +L+ A
Sbjct: 299 EVLELFRKYN-YKSDLVFYNTLLFMFGKGGHYADAWKILEDMKAAGFMPTSETYNSLILA 357
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP 248
+ R S EA TL +MK +P ++S L++A + + E L M E ++
Sbjct: 358 FGRGSQWQEAENTLERMKA-NGVKPVAQSFSFLLEAYSLSGQIPKGEKLIVKMKEENLIY 416
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW 308
N +L Y +AG + + ++ KP+ + ++ + VD
Sbjct: 417 GIAGHNSLLRFYMRAGDIGSIIQTYE-TCQTRGPKPNQSSFVPMIEALTKENTVD----- 470
Query: 309 YEKFRNFGIDPETRTFNILIGAYG 332
E+F D E F++ +G
Sbjct: 471 -ERFWGIAQDLENAPFDVHFAIHG 493
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 76/194 (39%), Gaps = 2/194 (1%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A ++ E +K F P TY L++ G+ Q + A M G++P + ++ LL
Sbjct: 332 AWKILEDMKAAGF-MPTSETYNSLILAFGRGSQWQEAENTLERMKANGVKPVAQSFSFLL 390
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
AY + I + + +MK N + +++L++ + A I Y+ R
Sbjct: 391 EAYSLSGQIPKGEKLIVKMKE-ENLIYGIAGHNSLLRFYMRAGDIGSIIQTYETCQTRGP 449
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PN + ++ K D+ ++ LE+A +LS GQ +
Sbjct: 450 KPNQSSFVPMIEALTKENTVDERFWGIAQDLENAPFDVHFAIHGALLSALGRCGQSPDAD 509
Query: 307 RWYEKFRNFGIDPE 320
R + G P+
Sbjct: 510 RLLGILKRLGCSPD 523
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 138/327 (42%), Gaps = 7/327 (2%)
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
G +G + EMVE GI PT + L+ YC+NS A +MK
Sbjct: 240 GGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQ-QGIAAS 298
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
V TY++LI + E L ++M++ ++PN +T VL G+ K GM +
Sbjct: 299 VVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWID 358
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
GM E +PDV N ++ V+ G+++ E GI P T+N LI + +
Sbjct: 359 GMTER-NVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRS 417
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
+ S +++ M++ TYN +I A G+ + ++M G++ + T+
Sbjct: 418 GDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTY 477
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
+I G+ + G K + NV YN I + + E + M +
Sbjct: 478 NTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLD 537
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDKVY 481
K P+ T+ + KEGM +K Y
Sbjct: 538 KCLVPNGITYETI-----KEGMMEKGY 559
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 171/419 (40%), Gaps = 41/419 (9%)
Query: 123 QWFQALQVFEMLKE-QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
Q +A F + E P ++P + LL L + + +LA K F + + P
Sbjct: 134 QPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYT 193
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV---DAMRFELIETLY 238
+ +++ CR + +A +K P V TY++LI A ++ L
Sbjct: 194 FNTVISGLCRIGQLRKAGDVAKDIKAW-GLAPSVATYNSLIDGYCKKGGAGNMYHVDMLL 252
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAG-------MFDQMER------------VLSGM--- 276
++M E ++P VT +++ GY K +F++M++ ++SG+
Sbjct: 253 KEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSE 312
Query: 277 ------------LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
+E P+ T +L F KG + W + ++P+ +
Sbjct: 313 GKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIY 372
Query: 325 NILIGAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
NILI Y + +M D M+ V E M K +TYN +I FS GD + ++M
Sbjct: 373 NILIDVYRRLGKMEDAMA-VKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK 431
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
+G++AD T+ LI G K + + S++ + N YN +I ++
Sbjct: 432 EKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIK 491
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGHWQQNI 502
+ RM++ R + T+++ + + + G D+ L E L L +G + I
Sbjct: 492 SAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI 550
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 162/368 (44%), Gaps = 5/368 (1%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
LK + ++L + + Q F Q +Y LL L K G+ A K+ + + P
Sbjct: 92 LKGEVKKSLHFHDKVVAQGF-QMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNV 150
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+Y ++ C++ L++EA+ ++M PD TY+TLI + +L
Sbjct: 151 VMYNTIIDGLCKDKLVNEAYDLYSEMDA-RGIFPDAITYTTLIYGFCLLGQLMGAFSLLD 209
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
+M +++ P NI++ K G + + +L+ M + KP V T +T++ +
Sbjct: 210 EMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGI-KPGVVTYSTLMDGYCLV 268
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK-KRMYDKMSSVMEYMRKLQFPWTSST 358
G+V ++ + G++P ++NI+I K KR+ + M+ + E + K P T T
Sbjct: 269 GEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTV-T 327
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN++I+ G +MH G AD T+ L++ K +
Sbjct: 328 YNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMK 387
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ I + Y A+I K L + +++ + K C D T+++M KEGM D
Sbjct: 388 ERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFD 447
Query: 479 KVYALEQE 486
+ A++ +
Sbjct: 448 EALAIKSK 455
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 174/422 (41%), Gaps = 24/422 (5%)
Query: 83 GYRSKRTPIKNLKKKLERKAKAKAWVN----TVAETFS-DHVLKKQWFQ----------A 127
GY+ + L K L K + K ++ VA+ F DHV A
Sbjct: 75 GYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCA 134
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
+++ M++++ +P Y ++ L K A +++EM GI P YT L+
Sbjct: 135 VKLLRMIEDRS-TRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIY 193
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVT 247
+C + AF L++M L N P VY Y+ LI A + + L M + +
Sbjct: 194 GFCLLGQLMGAFSLLDEM-ILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIK 252
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMER 307
P VT + ++ GY G +++ M++ P+V++ N +++ +VD
Sbjct: 253 PGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGV-NPNVYSYNIMINGLCKCKRVDEAMN 311
Query: 308 WYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS 367
+ + + P+T T+N LI K ++M M P TY ++++A
Sbjct: 312 LLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALC 371
Query: 368 DMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI---AE 424
+ F +M G++ T+ LI+G G ++ ++ L L +
Sbjct: 372 KNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGG---RLKNAQELFQHLLVKGCCI 428
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
+V Y +IS K E + +M++ C P++ TF I+ + ++ NDK L
Sbjct: 429 DVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLL 488
Query: 485 QE 486
E
Sbjct: 489 HE 490
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 101/248 (40%), Gaps = 5/248 (2%)
Query: 101 KAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQP 160
K K V T + + L + A Q+F + + P +Y ++ L K +
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGV-NPNVYSYNIMINGLCKCKRV 306
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP-DVYTYS 219
+ A + EM+ + + P Y +L+ C++ I A +N+M QP DV TY+
Sbjct: 307 DEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMH--HRGQPADVVTYT 364
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
+L+ A + L+ M ER + P T ++ G K G + + +L
Sbjct: 365 SLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVK 424
Query: 280 ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
C DVWT ++S +G D K + G P TF I+I + +K DK
Sbjct: 425 GCC-IDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDK 483
Query: 340 MSSVMEYM 347
++ M
Sbjct: 484 AEKLLHEM 491
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY LL L K+ + A +F +M E GI+PT YTAL+ C+ + A L Q
Sbjct: 362 TYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNA-QELFQH 420
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ C DV+TY+ +I F+ + M++ PN VT I++ +
Sbjct: 421 LLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDE 480
Query: 266 FDQMERVLSGML 277
D+ E++L M+
Sbjct: 481 NDKAEKLLHEMI 492
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 79/203 (38%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P + N IL A Q ++ GI T NILI + SV
Sbjct: 8 PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ + KL + + T N +++ G+ K + +++ A+G + D ++ L+NG
Sbjct: 68 LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
G + +R+ NV YN +I K + E +Y M + PD+ T
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187
Query: 464 FSIMTEAYAKEGMNDKVYALEQE 486
++ + + G ++L E
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDE 210
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 186/407 (45%), Gaps = 34/407 (8%)
Query: 83 GYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQP 142
GY+ + L + L K K +N F DHV++K+ F QV
Sbjct: 118 GYQPDTVTVNTLLRGLCLNGKVKEALN-----FHDHVIRKR-FHLDQV------------ 159
Query: 143 KEGTYMKLLVLLGKSGQPELARKVFNEMVEEG---IEPTPELYTALLAAYCRNSLIDEAF 199
+Y L+ L KSG+ A ++ ++ EG + P +YTA++ ++C++ L+ +A+
Sbjct: 160 ---SYGTLINGLCKSGETRAALQLLRKI--EGLLLVRPDVIMYTAIIDSFCKDKLVIDAY 214
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
++M + P+V T+++LI + + L +M +V PN T NI++ G
Sbjct: 215 DLYSEM-IVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDG 273
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K G + VLS M++ +P+V T +++ + +V+ + + G+ P
Sbjct: 274 LCKEGEVKKATSVLSVMIKQGV-EPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTP 332
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+++++I K +M D+ + + M + TY+++I+ G +
Sbjct: 333 NVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLI 392
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISAC 436
++++ G A+ T+ L+NG H+V ++ L +K++ I ++S Y ++
Sbjct: 393 DEINNRGQPANIITYNSLLNGLCKN---HQVDKAIALLTKMKDEGIQPDMSTYTTLVDGL 449
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
K L + +R+Y+ + K + +++M KEG D+ +L
Sbjct: 450 CKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSL 496
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/360 (20%), Positives = 143/360 (39%), Gaps = 74/360 (20%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
P T+ L+ L K G+ + A V + M+++G+EP YT+L+ Y +++A
Sbjct: 261 NPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKH 320
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
N + +L P+V++YS +I C + M E ++ L+++M +++TPNTVT + ++ G
Sbjct: 321 VFNTI-SLRGVTPNVHSYSVMINGLCKNKMVDEAVK-LFKEMHLKNMTPNTVTYSSLIDG 378
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K+G + ++ + ++ T N++L+ QVD K ++ GI P
Sbjct: 379 LCKSGRISDVWDLIDEINNRGQ-PANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQP 437
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ STY +++ G K + +
Sbjct: 438 DM-----------------------------------STYTTLVDGLCKNGRLKDAQRIY 462
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
+ + +G + + + +ING G F + +S
Sbjct: 463 QDLLCKGYPLNIRMYTVMINGLCKEGFFDEALS--------------------------- 495
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGHWQ 499
+ +M++ C PD+ T+ + A K N K L +E + + SG Q
Sbjct: 496 --------LLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIARESDCSGKEQ 547
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 150/366 (40%), Gaps = 13/366 (3%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A+ F + + P + K+L L K ++A +M +GI+P + L+
Sbjct: 36 AVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILI 95
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDER- 244
+ ++ AF + ++ L QPD T +TL++ C++ E + + +R
Sbjct: 96 NCFSHLCQLNFAFSMVAKILKL-GYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRF 154
Query: 245 ---SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA-NKG 300
V+ T+ + G +A + Q+ R + G+L +PDV I+ F +K
Sbjct: 155 HLDQVSYGTLINGLCKSGETRAAL--QLLRKIEGLL---LVRPDVIMYTAIIDSFCKDKL 209
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+D + + E I P TFN LI + + ++ M T+N
Sbjct: 210 VIDAYDLYSEMIVK-KIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFN 268
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+I+ G+ K M +G++ + T+ L++GY +K S
Sbjct: 269 ILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLR 328
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+ NV Y+ +I+ K + E +++K M K+ P++ T+S + + K G V
Sbjct: 329 GVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDV 388
Query: 481 YALEQE 486
+ L E
Sbjct: 389 WDLIDE 394
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
Q +A+ + +K++ QP TY L+ L K+G+ + A++++ +++ +G +Y
Sbjct: 419 QVDKAIALLTKMKDEGI-QPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMY 477
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
T ++ C+ DEA L+QM+ C PD TY TLI A
Sbjct: 478 TVMINGLCKEGFFDEALSLLSQMED-NGCMPDAVTYETLISA 518
>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 137/318 (43%), Gaps = 1/318 (0%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
+SG E A + F +M E G++PT Y L+ Y +E+ L M N +P++
Sbjct: 95 ESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESVKLLELMSQEGNVKPNL 154
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
TY+ L++A + R + M + P+ VT N + Y + G DQ E V+
Sbjct: 155 RTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALDQAEGVILE 214
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
M ++ +P+ T I+S + +G++ R+ + + GI P FN LI +
Sbjct: 215 M-QNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNLVIFNSLIKGFVAIM 273
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
D + V+ M + T++ ++ A+S G + F+ M G++ D +
Sbjct: 274 DRDGVDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYS 333
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
L GY A K + K NV + VIS A + RV+ +M ++
Sbjct: 334 ILAKGYVRAQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQR 393
Query: 456 HCRPDSETFSIMTEAYAK 473
P+ +TF + +A+
Sbjct: 394 GISPNLKTFETLIWGFAE 411
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 159/361 (44%), Gaps = 10/361 (2%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG-IEPTPELYTAL 185
A++ F ++E +P TY L+ G +G+PE + K+ M +EG ++P Y L
Sbjct: 102 AMETFWKMQENGM-KPTTSTYNTLIKGYGIAGKPEESVKLLELMSQEGNVKPNLRTYNVL 160
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A+C I EA+ + +M QPDV TY+T+ A + E + +M
Sbjct: 161 VRAWCNKKRITEAWNVVYKM-IASGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNNG 219
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
V PN T I++ GY K G + R M E P++ N+++ F D +
Sbjct: 220 VQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGI-HPNLVIFNSLIKGFVAIMDRDGV 278
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ FG+ P+ TF+ ++ A+ +K + + M K + Y+ + +
Sbjct: 279 DEVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKG 338
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL---QI 422
+ + + E M G + + F +I+G+ +AG K+ +VR+ K+ I
Sbjct: 339 YVRAQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAG---KMDYAVRVFDKMCQRGI 395
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
+ N+ + +I +A + E + + M E +P+ T ++ EA+ GM +
Sbjct: 396 SPNLKTFETLIWGFAEARQPWKAEEILQIMTEFEVQPEKSTMLLVAEAWRATGMTKEANR 455
Query: 483 L 483
L
Sbjct: 456 L 456
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 151/351 (43%), Gaps = 40/351 (11%)
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
KL+ L + G+P+ A +F ++E G +P+ YT LLAA D + ++Q++
Sbjct: 18 KLMNFLVEKGKPQEAESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSIISQVEE- 76
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
PD ++ +I A ++ E + M E + P T T N ++ GYG AG ++
Sbjct: 77 NGMNPDSIFFNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEE 136
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF--GIDPETRTFNI 326
++L M + KP++ T N ++ + NK ++ E W ++ GI P+ T+N
Sbjct: 137 SVKLLELMSQEGNVKPNLRTYNVLVRAWCNKKRIT--EAWNVVYKMIASGIQPDVVTYNT 194
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
+ AY +K D+ V+ +M G
Sbjct: 195 IATAYAQKGALDQAEGVI-----------------------------------LEMQNNG 219
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
++ + +T +++GY G + + +L I N+ +N++I + D ++
Sbjct: 220 VQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNLVIFNSLIKGFVAIMDRDGVD 279
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
V M+E +PD TFS + A++ G +K + + ++ +E H
Sbjct: 280 EVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAH 330
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 159/358 (44%), Gaps = 4/358 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ KS A ++ EM + P+P Y+ L++ C +S + +A
Sbjct: 413 EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANE 472
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L+QM +P+V+ Y TLIKA V R+E+ L + M V P+ N ++ G
Sbjct: 473 VLDQM-IRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGL 531
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+A ++ + +L M E KP+ T +++++ G++ + ER+++ + GI P
Sbjct: 532 CRAKKVEEAKMLLVDMGEKGI-KPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPN 590
Query: 321 TRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ ILI G + +S+ + K P + Y+ +I + S G K F
Sbjct: 591 NVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRA-YSAIIHSLSKNGKTKEAMGVF 649
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
+ G+ D + LI+G+ G K I N+ YN +I+ K
Sbjct: 650 LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKL 709
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
++ + ++ ++EK PD T+S + + Y K G + + L E + + G+
Sbjct: 710 GEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGY 767
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 152/366 (41%), Gaps = 39/366 (10%)
Query: 145 GTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQ 204
GT +K V + + E+A ++ M+ G+ P Y L+ CR ++EA + L
Sbjct: 490 GTLIKAYV---QESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVD 546
Query: 205 MKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG 264
M +P+ +TY I + ++ E ++DM + PN V I++ G+ G
Sbjct: 547 MGE-KGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVG 605
Query: 265 MFDQMERVLSGMLESATCK----------------------------------PDVWTMN 290
+ MLE PDV+ N
Sbjct: 606 NTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYN 665
Query: 291 TILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
+++S F +G ++ + Y++ + GI+P +N LI K K + + + +
Sbjct: 666 SLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEK 725
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
TY+ +I+ + G+ F++M ++G+ D +C LI+G G K
Sbjct: 726 DLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKA 785
Query: 411 ISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
+S A + + ++S +N++I + K ++E ++ M +K P+ T++I+ +A
Sbjct: 786 LSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDA 844
Query: 471 YAKEGM 476
Y K M
Sbjct: 845 YGKAEM 850
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 152/369 (41%), Gaps = 36/369 (9%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY + L KSG+ ++A + F +M+ GI P +YT L+ +C EA
Sbjct: 553 KPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALS 612
Query: 201 TLNQM---KTLPNCQ-------------------------------PDVYTYSTLIKACV 226
T M +P+ + PDV+ Y++LI
Sbjct: 613 TFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFC 672
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
E LY +M + PN V N ++ G K G + R L +E PDV
Sbjct: 673 KEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTK-ARELFDEIEEKDLVPDV 731
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
T +TI+ + G + + +++ + GI P+ + ILI GK+ +K S+
Sbjct: 732 VTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHE 791
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
++ + + S +N++I++F G F+ M + + + T+ LI+ Y A +
Sbjct: 792 AQQ-KSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEM 850
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ I N Y +++ + + + +M ++K M+ + D+ + +
Sbjct: 851 MEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGV 910
Query: 467 MTEAYAKEG 475
M AY KEG
Sbjct: 911 MASAYCKEG 919
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 143/334 (42%), Gaps = 3/334 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY ++ K G + V +EM E+ +P Y A + C+ +DEA +
Sbjct: 240 PDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEA-LE 297
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ ++ PD +TY+ L+ R + + +++ M + PN T ++ G+
Sbjct: 298 VKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFI 357
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G ++ R+ M+ K +V T N ++ A G++ + + G++P+T
Sbjct: 358 KEGNIEEALRIKDEMITRGL-KLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDT 416
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+N+LI Y K K ++ M+ + + TY+ +I D + +Q
Sbjct: 417 WTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQ 476
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G+K + + LI Y + I +++ + ++ YN +I +A
Sbjct: 477 MIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKK 536
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ E + + M EK +P++ T+ Y+K G
Sbjct: 537 VEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSG 570
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 151/344 (43%), Gaps = 15/344 (4%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P Y L+ K G E A ++++EM+ GI P +Y L+ C+ + +A
Sbjct: 659 PDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKAREL 718
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
++++ + PDV TYST+I + L+ +M + ++P+ I++ G G
Sbjct: 719 FDEIEE-KDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCG 777
Query: 262 KAGMFDQMERVLSGMLESATCKP--DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K G +E+ LS + A K + N+++ F G+V ++ + + P
Sbjct: 778 KEG---NLEKALS-LFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTP 833
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
T+ ILI AYGK M ++ + M + TY +++ +++ +G+ M F
Sbjct: 834 NIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLF 893
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI-- 437
+ M A G+ D + + + Y G K + +++L +K + E + + V A I
Sbjct: 894 KDMEARGIACDAIAYGVMASAYCKEG---KSLEALKLLNK-SLVEGIKLEDDVFDALIFH 949
Query: 438 --KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
K + + + M ++ S+T + + + K G D+
Sbjct: 950 LCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDE 993
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 107/258 (41%), Gaps = 2/258 (0%)
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
P + + L++ + A L +Y M E + P+ T V+ + K G + + V
Sbjct: 205 PTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMV 264
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
LS M CKP+++T N + G VD + G+ P+ T+ +L+ +
Sbjct: 265 LSEM--EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFC 322
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K++ + + E M TY +I+ F G+ + ++M G+K +
Sbjct: 323 KQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVV 382
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
T+ +I G A AG K +S + + YN +I +K+ D+ + + M
Sbjct: 383 TYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEM 442
Query: 453 KEKHCRPDSETFSIMTEA 470
K + P T+S++
Sbjct: 443 KARKLTPSPFTYSVLISG 460
>gi|125556718|gb|EAZ02324.1| hypothetical protein OsI_24426 [Oryza sativa Indica Group]
gi|125598467|gb|EAZ38247.1| hypothetical protein OsJ_22623 [Oryza sativa Japonica Group]
Length = 478
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 145/333 (43%), Gaps = 2/333 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P Y LL L + LA ++ +M ++G+ Y LL AY R +++++
Sbjct: 118 RPDAAHYNALLEGLLSTAHLRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWW 177
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +MK + D YSTL++ D ++ L +M E V + N ++ +
Sbjct: 178 VLGEMKR-RGIRLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTF 236
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
GK G +V M KPD+ T N+++ G R++ + G+ P+
Sbjct: 237 GKYGQLADARKVFDKMCAEGV-KPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPD 295
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+ F +I G++ +D++ + MR + + Y +++ + G +
Sbjct: 296 PKIFVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVA 355
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+ AE ++ FC L N YA GL + ++ ++L I N+ N +I+A A
Sbjct: 356 ALKAENLQLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAG 415
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+E V + +K+ PD T++ + +A+ +
Sbjct: 416 RHLEALAVLQHIKDSGMSPDVVTYTTLMKAFMR 448
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/319 (19%), Positives = 113/319 (35%), Gaps = 72/319 (22%)
Query: 165 KVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
++ +M G+ P+ Y L+ A R EA L +M+ L +PD Y+ L++
Sbjct: 72 RLLADMQAAGLRPSGAAYARLIRALARAGRTLEAEALLLEMRRL-GLRPDAAHYNALLEG 130
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
+ L + L M + V N T ++L Y +A G LE +
Sbjct: 131 LLSTAHLRLADRLLLQMADDGVARNRRTYMLLLNAYARA-----------GRLEDSW--- 176
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
W + + + GI +T ++ L+ Y M+ K + ++
Sbjct: 177 --WVLG--------------------EMKRRGIRLDTAGYSTLVRLYRDNGMWKKATDLI 214
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
M++L YN +I+ F G F++M AEG+K D T+ LI +
Sbjct: 215 MEMQELGVELDVKIYNGLIDTFGKYGQLADARKVFDKMCAEGVKPDITTWNSLIRWHCRV 274
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
G + + R + M+E+ PD + F
Sbjct: 275 GNTKRAL-----------------------------------RFFAAMQEEGMYPDPKIF 299
Query: 465 SIMTEAYAKEGMNDKVYAL 483
+ ++G D++ L
Sbjct: 300 VTIISRLGEQGKWDEIKKL 318
>gi|384249299|gb|EIE22781.1| hypothetical protein COCSUDRAFT_47692 [Coccomyxa subellipsoidea
C-169]
Length = 1226
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 118/262 (45%), Gaps = 1/262 (0%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
DVYTY+ I CV A + E L DM R V N T + ++ K G V
Sbjct: 135 DVYTYTAAISICVSAQQLERALELSADMQRRGVQRNVHTHSALMNVCIKCGQLKLALDVW 194
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
M P+V T NT++ V+ GQ + + + + GI+P TRT+N L+ A
Sbjct: 195 EDMQRDGIV-PNVVTYNTLIDVYGKLGQWEQALQVLRRMKFQGIEPVTRTYNTLMIACNT 253
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+ + E MR +++YN +I A S GD + T+ QM +G + T
Sbjct: 254 SGQWQTALQLYEEMRAAGHALNTTSYNALISAHSKAGDLPQVLDTYRQMVQQGCERSVIT 313
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+ LI+ +G + + K NV +N++I+AC + + +++ M+
Sbjct: 314 YSSLISACEKSGEWQLALRFFDECLKDNCRPNVITFNSLITACAQGAQWEKARELFELMQ 373
Query: 454 EKHCRPDSETFSIMTEAYAKEG 475
++ C PD T++ + AY + G
Sbjct: 374 QQGCTPDVVTYTALISAYERGG 395
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 119/254 (46%), Gaps = 2/254 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
T+ L+ + K GQ +LA V+ +M +GI P Y L+ Y + ++A L +M
Sbjct: 173 THSALMNVCIKCGQLKLALDVWEDMQRDGIVPNVVTYNTLIDVYGKLGQWEQALQVLRRM 232
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
K +P TY+TL+ AC + +++ LY++M NT + N ++ + KAG
Sbjct: 233 K-FQGIEPVTRTYNTLMIACNTSGQWQTALQLYEEMRAAGHALNTTSYNALISAHSKAGD 291
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
Q+ M++ C+ V T ++++S G+ + R++++ P TFN
Sbjct: 292 LPQVLDTYRQMVQQG-CERSVITYSSLISACEKSGEWQLALRFFDECLKDNCRPNVITFN 350
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
LI A + ++K + E M++ TY +I A+ G + F+ M A+
Sbjct: 351 SLITACAQGAQWEKARELFELMQQQGCTPDVVTYTALISAYERGGKWQLALQAFQAMQAK 410
Query: 386 GMKADTKTFCCLIN 399
G K D+ + +I+
Sbjct: 411 GCKPDSIVYNAIID 424
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 3/206 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
QW QALQV +K Q +P TY L++ SGQ + A +++ EM G Y
Sbjct: 221 QWEQALQVLRRMKFQGI-EPVTRTYNTLMIACNTSGQWQTALQLYEEMRAAGHALNTTSY 279
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
AL++A+ + + + T QM C+ V TYS+LI AC + ++L + +
Sbjct: 280 NALISAHSKAGDLPQVLDTYRQM-VQQGCERSVITYSSLISACEKSGEWQLALRFFDECL 338
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
+ + PN +T N ++ + +++ R L +++ C PDV T ++S + G+
Sbjct: 339 KDNCRPNVITFNSLITACAQGAQWEKA-RELFELMQQQGCTPDVVTYTALISAYERGGKW 397
Query: 303 DMMERWYEKFRNFGIDPETRTFNILI 328
+ + ++ + G P++ +N +I
Sbjct: 398 QLALQAFQAMQAKGCKPDSIVYNAII 423
>gi|297827821|ref|XP_002881793.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
gi|297327632|gb|EFH58052.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
Length = 822
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 159/373 (42%), Gaps = 39/373 (10%)
Query: 131 FEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYC 190
FEM K +P TY L+ G++GQ A + ++M+ I P+ Y L+ A
Sbjct: 167 FEMQKWS--CKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACG 224
Query: 191 RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT 250
+ +A +M T PD+ T++ ++ A ++ + ++ M V P+T
Sbjct: 225 SSGNWRQALEVCKKM-TDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDT 283
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLES-ATCKPDVWTMNTILSVFANKGQVDMMERWY 309
T NI++ K G Q V + M + A C+PDV T +I+ +++ +G+++ +
Sbjct: 284 TTFNIIIYCLSKLGQSSQALDVFNSMRDKRAECRPDVVTFTSIMHLYSVRGEIENCRAVF 343
Query: 310 EKFRNFGIDPETRTFNILIGAY-----------------------------------GKK 334
E G+ P ++N L+GAY G+
Sbjct: 344 EAMLAEGLKPNIVSYNALMGAYAVHGMSENALSVFGDIKRNGIVPDVVSYTSLLNSYGRS 403
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
R K V MRK + TYN +I+A+ G F QM +G K + +
Sbjct: 404 RQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGTKPNVVSV 463
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
C L+ + + V + + A I N + YN+ I + I A +L + +Y+ M++
Sbjct: 464 CTLLAACSRSKKKVNVETVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQTMRK 523
Query: 455 KHCRPDSETFSIM 467
K + DS TF+I+
Sbjct: 524 KKVKADSVTFTIL 536
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 158/352 (44%), Gaps = 5/352 (1%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
+Q+ +AL FE++K +P T+ ++ L K GQ A VFN M ++ E P++
Sbjct: 262 RQYSKALSYFELMKGAKV-RPDTTTFNIIIYCLSKLGQSSQALDVFNSMRDKRAECRPDV 320
Query: 182 --YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+T+++ Y I+ M +P++ +Y+ L+ A E +++
Sbjct: 321 VTFTSIMHLYSVRGEIENCRAVFEAMLA-EGLKPNIVSYNALMGAYAVHGMSENALSVFG 379
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
D+ + P+ V+ +L YG++ + + V M+ KP+V T N ++ + +
Sbjct: 380 DIKRNGIVPDVVSYTSLLNSYGRSRQPGKAKEVFL-MMRKERRKPNVVTYNALIDAYGSN 438
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G + + + G P + L+ A + + + +V+ + ++ Y
Sbjct: 439 GFLAEAVEIFRQMEQDGTKPNVVSVCTLLAACSRSKKKVNVETVLSAAQSRGINLNTAAY 498
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
N+ I ++ + + + ++ M + +KAD+ TF LI+G + + IS ++
Sbjct: 499 NSAIGSYINAAELEKAIALYQTMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 558
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
L I Y++V+ A K + E E ++ +MK C+PD ++ M AY
Sbjct: 559 LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCKPDVIAYTSMLHAY 610
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 154/329 (46%), Gaps = 5/329 (1%)
Query: 150 LLVLLGKSGQPELARKVFNEM-VEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
L+ L + G EL VF M ++ ++Y ++ + R++ +D+A +M+
Sbjct: 113 LIRELSRRGCIELCVNVFKWMKSQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKW 172
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
+C+PD TY LI A A ++ L DM ++ P+ T N ++ G +G + Q
Sbjct: 173 -SCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWRQ 231
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
V M ++ PD+ T N +LS + + Q ++E + + P+T TFNI+I
Sbjct: 232 ALEVCKKMTDNGV-GPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIII 290
Query: 329 GAYGKKRMYDKMSSVMEYMR--KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
K + V MR + + T+ +++ +S G+ ++ FE M AEG
Sbjct: 291 YCLSKLGQSSQALDVFNSMRDKRAECRPDVVTFTSIMHLYSVRGEIENCRAVFEAMLAEG 350
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+K + ++ L+ YA G+ +S + I +V Y +++++ ++ + +
Sbjct: 351 LKPNIVSYNALMGAYAVHGMSENALSVFGDIKRNGIVPDVVSYTSLLNSYGRSRQPGKAK 410
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
V+ M+++ +P+ T++ + +AY G
Sbjct: 411 EVFLMMRKERRKPNVVTYNALIDAYGSNG 439
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 151/412 (36%), Gaps = 106/412 (25%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL VF +K P +Y LL G+S QP A++VF M +E +P Y AL+
Sbjct: 374 ALSVFGDIKRNGIV-PDVVSYTSLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALI 432
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
AY N + EA QM+ +P+V + TL+ AC + + +ET+ R +
Sbjct: 433 DAYGSNGFLAEAVEIFRQMEQ-DGTKPNVVSVCTLLAACSRSKKKVNVETVLSAAQSRGI 491
Query: 247 TPNTVTQNIVLGGYGKAG-------MFDQMER-------VLSGMLESATCK----PDVWT 288
NT N +G Y A ++ M + V +L S +C+ P+ +
Sbjct: 492 NLNTAAYNSAIGSYINAAELEKAIALYQTMRKKKVKADSVTFTILISGSCRMSKYPEAIS 551
Query: 289 M----------------NTILSVFANKGQV-----------------------------D 303
+++L ++ +GQV +
Sbjct: 552 YLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCKPDVIAYTSMLHAYN 611
Query: 304 MMERWYEKFRNF------GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
E+W + F GI+P++ + L+ A+ K + +M+ MR+ + P+T +
Sbjct: 612 ASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEVPFTGA 671
Query: 358 TY-----------------------------------NNVIEAFSDMGDAKHMEYTFEQM 382
+ N ++ F G + M F ++
Sbjct: 672 VFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLYLFGKSGKVEAMMKLFYKI 731
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVIS 434
A G++ + KT+ L+ G + K I + S I + Y +IS
Sbjct: 732 IASGVEINFKTYAILLEHLLAVGNWRKYIEVLEWMSDAGIQPSNQMYRDIIS 783
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/304 (18%), Positives = 117/304 (38%), Gaps = 38/304 (12%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+ L+ R I+ MK+ N Y+ +I+ + L+ +M
Sbjct: 110 FPVLIRELSRRGCIELCVNVFKWMKSQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEM 169
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ S P+ T + ++ +G+AG + ++ ML +A P T N +++ + G
Sbjct: 170 QKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIA-PSRSTYNNLINACGSSGN 228
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+K + G+ P+ T NI++ AY R Y K S E M+ + ++T+N
Sbjct: 229 WRQALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNI 288
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGM--KADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+I S +G + F M + + D TF +++ Y+ G
Sbjct: 289 IIYCLSKLGQSSQALDVFNSMRDKRAECRPDVVTFTSIMHLYSVRG-------------- 334
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
++ V++ M + +P+ +++ + AYA GM++
Sbjct: 335 ---------------------EIENCRAVFEAMLAEGLKPNIVSYNALMGAYAVHGMSEN 373
Query: 480 VYAL 483
++
Sbjct: 374 ALSV 377
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 174/403 (43%), Gaps = 18/403 (4%)
Query: 81 IPGYRSKRTPIKNLKKKLERKAKAKAWVN--TVAETFSDHVLKKQWFQALQ-VFEMLKEQ 137
I GY K +++ + LE +N T LK ++ AL + EML
Sbjct: 344 IQGY-CKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRN 402
Query: 138 PFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDE 197
++P +G L+ L ++G+ A +++ ++E+G AL+ C +E
Sbjct: 403 --FKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEE 460
Query: 198 AFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVL 257
A L +M D +Y+TLI AC + E L ++M R + P+ T N++L
Sbjct: 461 AAKLLKEMLE-RGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLL 519
Query: 258 GGYGKAGMFDQMERVLSGMLESATCK-----PDVWTMNTILSVFANKGQVDMMERWYEKF 312
G G ++ G+ CK PD +T ++ + +V+ E+ +++
Sbjct: 520 HGLCNMGKIEEA----GGLWHE--CKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEM 573
Query: 313 RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
I+ + LI AY + + + + MR P TS+TY+++I S++G
Sbjct: 574 VTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLV 633
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAV 432
++M EG+ + + LI GY G HKV S ++ S + N Y +
Sbjct: 634 DSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIM 693
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
I+ K ++ ++ M +K PD+ T++ +T + KEG
Sbjct: 694 INGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEG 736
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 148/348 (42%), Gaps = 3/348 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A++++ L E+ F T L+ L ++G E A K+ EM+E G+ Y L
Sbjct: 425 EAIELWYRLLEKGF-AANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTL 483
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A C+ ++E F L + QPD+YTY+ L+ + + E L+ + +
Sbjct: 484 ILACCKEGKVEEGF-KLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNG 542
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ T I++ GY KA ++ E++ M+ + + + T++ + G +
Sbjct: 543 NFPDAYTYGIMIDGYCKANRVEEGEKLFQEMV-TMKIEQNAVVYGTLIRAYCENGNMREA 601
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
R + R+ GI + T++ LI + D + +++ MRK Y +I
Sbjct: 602 FRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGG 661
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ +G ++ ++M + + T+ +ING+ G + ++ I +
Sbjct: 662 YCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPD 721
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
YNA+ + K + E +V M D T++ + + + K
Sbjct: 722 AVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHK 769
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 161/389 (41%), Gaps = 5/389 (1%)
Query: 102 AKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPE 161
A A V+ + +S + ++F +L + + P T LL L K+ + +
Sbjct: 121 AVAVTVVDLLIHVYSTQFKHLGFGVVFELFSLLANKGLF-PSLKTCNFLLSSLVKANEVK 179
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
++ +VF+ M G+ P L++ ++ A+C +D+A +M+ + P+V TY+ +
Sbjct: 180 MSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKV-GVAPNVVTYNNI 238
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
I R + + M++ V P+ VT +++ G K FD+ +L M +
Sbjct: 239 IHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGY 298
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
P+ NT++ + G + + + + GI P + T N LI Y K +
Sbjct: 299 -APNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAE 357
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
++E M T+ +VI +M K + L++G
Sbjct: 358 HLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGL 417
Query: 402 ANAGLFHKVISS-VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
G + I RL K A N NA+I +A E ++ K M E+ D
Sbjct: 418 CQNGKQSEAIELWYRLLEK-GFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLD 476
Query: 461 SETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
S +++ + A KEG ++ + L++E ++
Sbjct: 477 SISYNTLILACCKEGKVEEGFKLKEEMVR 505
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 146/375 (38%), Gaps = 43/375 (11%)
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
G+ + A ++F +M + G+ P Y ++ C+N +DEAF +M+ +P +
Sbjct: 210 GGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEK-ERVKPSLV 268
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
TY LI V RF+ + ++M +R PN V N ++ GY + G ++ M
Sbjct: 269 TYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDM 328
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
+ + P+ T N+++ + Q++ E E+ G TF +I K
Sbjct: 329 ISNGI-SPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCR 387
Query: 337 YD--------------------------------KMSSVMEYMRKL---QFPWTSSTYNN 361
+D K S +E +L F + T N
Sbjct: 388 FDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNA 447
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL- 420
+I + G + ++M G+ D+ ++ LI G KV +L ++
Sbjct: 448 LIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEG---KVEEGFKLKEEMV 504
Query: 421 --QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
I ++ YN ++ + E ++ K+ PD+ T+ IM + Y K +
Sbjct: 505 RRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVE 564
Query: 479 KVYALEQEKLQMLLE 493
+ L QE + M +E
Sbjct: 565 EGEKLFQEMVTMKIE 579
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 143/348 (41%), Gaps = 13/348 (3%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P + TY L+ + G + A KV M G EP Y L C+ +DEAF
Sbjct: 276 PTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRL 335
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACV------DAMRFELIETLYQDMDERSVTPNTVTQNI 255
++M+ L PDV TY+TL+ AC DA+R L ++M ++ V P VT NI
Sbjct: 336 KDEMERLGTALPDVVTYNTLVDACFKWRCSSDALR------LLEEMRDKGVKPTLVTHNI 389
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
V+ K G ++ L + E PDV T NT++ + G V ++
Sbjct: 390 VVKSLCKEGKLEEALGKLEKIAEEGLA-PDVITYNTLIDAYCKAGNVAKAFTLMDEMVGK 448
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G+ +T T N ++ K + Y+ ++ + F +Y V+ A+ + +
Sbjct: 449 GLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPA 508
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
++QM + T+ LI G + I + + + + + YN +I A
Sbjct: 509 LRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHA 568
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
K DL R + +M E +PD T + + G DK L
Sbjct: 569 YCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKL 616
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 158/385 (41%), Gaps = 39/385 (10%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+L VF L E + P T+ L+ G A + M G+ P Y LL
Sbjct: 192 SLDVFRSLIELRLH-PNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLL 250
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
A+CR ++ EA L +MK P TY+TL+ A + + + M
Sbjct: 251 NAHCRKGMLGEARALLARMKR-DGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGF 309
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL-SVFANKGQVDMM 305
P+ T N++ G +AG D+ R+ M T PDV T NT++ + F + D +
Sbjct: 310 EPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDAL 369
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
R E+ R+ G+ P T NI++ + K+ ++ +E + + TYN +I+A
Sbjct: 370 -RLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDA 428
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTF------CCLINGYANA----------GLFHK 409
+ G+ ++M +G+K DT T C + Y +A G
Sbjct: 429 YCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPD 488
Query: 410 VIS----------------SVRLASKL---QIAENVSFYNAVISACIKADDLMEMERVYK 450
+S ++RL ++ ++ ++S YN +I + + L E
Sbjct: 489 EVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLN 548
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEG 475
EK PD T++I+ AY KEG
Sbjct: 549 EFVEKGLVPDETTYNIIIHAYCKEG 573
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 107/237 (45%), Gaps = 8/237 (3%)
Query: 244 RSVTPNTVTQNIVLGGYGKA-GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
R V P+ N VL ++ Q + L P+ +T N ++ +KG +
Sbjct: 165 RGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTL 224
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ FG+ P+ T+N L+ A+ +K M + +++ M++ T TYN +
Sbjct: 225 ADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTL 284
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ- 421
+ AF+ +G K E M A G + D +T+ L G AG KV + RL +++
Sbjct: 285 VSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAG---KVDEAFRLKDEMER 341
Query: 422 ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+V YN ++ AC K + R+ + M++K +P T +I+ ++ KEG
Sbjct: 342 LGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEG 398
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 158/371 (42%), Gaps = 55/371 (14%)
Query: 94 LKKKLERKAKAKAWVNTVAETFSDHVLK-KQWFQALQVFEMLKEQPFYQPKEGTYMKLLV 152
LK ++ER A V T T D K + AL++ E ++++ +P T+ ++
Sbjct: 335 LKDEMERLGTALPDVVTY-NTLVDACFKWRCSSDALRLLEEMRDKGV-KPTLVTHNIVVK 392
Query: 153 LLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQ 212
L K G+ E A ++ EEG+ P Y L+ AYC+ + +AF +++M +
Sbjct: 393 SLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVG-KGLK 451
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
D +T +T++ R+E E L +R P+ V+ V+ Y K + R+
Sbjct: 452 MDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRL 511
Query: 273 LSGMLESATCKPDVWTMNTILSVFAN----KGQVDMMERWYEKFRNFGIDPETRTFNILI 328
M+E P + T NT++ K +D + + EK G+ P+ T+NI+I
Sbjct: 512 WDQMIERKLI-PSISTYNTLIKGLCRMERLKEAIDKLNEFVEK----GLVPDETTYNIII 566
Query: 329 GAYGKK-------RMYDKM---------------------SSVMEYMRKLQFPWTSS--- 357
AY K+ R ++KM ++ KL W
Sbjct: 567 HAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKK 626
Query: 358 ----TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-------L 406
TYN +I++ +GD + F+ M +G++ D T+ +++ + AG +
Sbjct: 627 VDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNM 686
Query: 407 FHKVISSVRLA 417
HK+ S +L+
Sbjct: 687 LHKLADSGKLS 697
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 122/307 (39%), Gaps = 40/307 (13%)
Query: 132 EMLKEQP--FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
E+L P + P E +Y ++ K PE A +++++M+E + P+ Y L+
Sbjct: 475 ELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGL 534
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
CR + EA LN+ PD TY+ +I A E + M E S P+
Sbjct: 535 CRMERLKEAIDKLNEFVE-KGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPD 593
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
VT N ++ G G D+ ++ +E K DV T NT++ G VD ++
Sbjct: 594 VVTCNTLMNGLCLHGKLDKALKLFESWVEKGK-KVDVITYNTLIQSMCKVGDVDTALHFF 652
Query: 310 EKFRNFGIDPETRTFNILIGAYGK-------KRMYDKM---------------------- 340
+ G+ P+ T+N+++ A + M K+
Sbjct: 653 DDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADE 712
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDM-------GDAKHMEYTFEQMHAEGMKADTKT 393
+ V E+ K + + +N +E + + G K + ++M +GM D T
Sbjct: 713 ADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCST 772
Query: 394 FCCLING 400
+ L+ G
Sbjct: 773 YITLMEG 779
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 131/334 (39%), Gaps = 43/334 (12%)
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMK------------------------TLPNCQ 212
PT L A L+AY R L A L+ ++ TLP
Sbjct: 133 PTSPLADAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQAS 192
Query: 213 PDV-------------YTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
DV YT++ L+ C + + TL M ++P+ VT N +L
Sbjct: 193 LDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATL-STMQGFGLSPDAVTYNTLLN 251
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
+ + GM + +L+ M P T NT++S FA G + + E +G +
Sbjct: 252 AHCRKGMLGEARALLARMKRDGIA-PTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFE 310
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS-STYNNVIEAFSDMGDAKHMEY 377
P+ RT+N+L + D+ + + M +L TYN +++A +
Sbjct: 311 PDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALR 370
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
E+M +G+K T ++ G + + + ++ +A +V YN +I A
Sbjct: 371 LLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYC 430
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
KA ++ + + M K + D TF++ T Y
Sbjct: 431 KAGNVAKAFTLMDEMVGKGLKMD--TFTLNTVLY 462
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/176 (19%), Positives = 70/176 (39%), Gaps = 2/176 (1%)
Query: 313 RNFGIDPETRTFNILIGAYGKKRMYDKMSS--VMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
R G+ P + N ++ A + +S V + +L+ T+N ++ G
Sbjct: 163 RRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKG 222
Query: 371 DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYN 430
T M G+ D T+ L+N + G+ + + + + IA YN
Sbjct: 223 TLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYN 282
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
++SA + + + +V + M PD T++++ + G D+ + L+ E
Sbjct: 283 TLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDE 338
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 138/342 (40%), Gaps = 2/342 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ LG+ G E + +EM E + P ++Y +++ A C+ +A V
Sbjct: 327 PTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVV 386
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L QM C PD T+STLI R + E L ++ + PN + ++ G+
Sbjct: 387 LKQMFA-GGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFC 445
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
G +L M+E PDV T ++ GQV EK + P+
Sbjct: 446 VRGEVIVASNLLVEMMERGH-TPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDA 504
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+N+LI KK+M +++E M + Y +I+ F FE
Sbjct: 505 NIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEF 564
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M +G+ D + +I GY G+ ++ + + K+ + Y +I K +
Sbjct: 565 MEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGN 624
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ + M ++ C+P+ +S + Y K G D L
Sbjct: 625 ISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECL 666
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 149/370 (40%), Gaps = 27/370 (7%)
Query: 108 VNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
V T V+ Q +AL V E + + P Y L+ L K AR +
Sbjct: 469 VVTFGALIHGLVVAGQVSEALLVREKMAARQLL-PDANIYNVLISGLCKKKMLPAARNLI 527
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CV 226
EM+E+ + P +YT L+ + RN +DEA M+ PDV Y+ +IK C
Sbjct: 528 EEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQ-KGIHPDVVGYNAMIKGYCQ 586
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
M E +E + M + P+ T ++GGY K G +L M++ C+P+V
Sbjct: 587 FGMMNEAVECM-STMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKR-RCQPNV 644
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
+++++ + G D E + + G+ P T+ ILIG+ KK + + EY
Sbjct: 645 VAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEY 704
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M Q T ++++ + + + ++ G A F L+N +
Sbjct: 705 MLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCD--- 761
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVI-SACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
S YNA+I S CI + L E + +M K +PDS TF
Sbjct: 762 -----------------PRNSAYNAIIFSLCIH-NMLGEALDLKNKMANKGYKPDSATFL 803
Query: 466 IMTEAYAKEG 475
+ + G
Sbjct: 804 SLLYGFCSVG 813
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 137/330 (41%), Gaps = 6/330 (1%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIE---PTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
LL LL ++G+ + +M G PT AL+A Y + +A + +
Sbjct: 156 LLRLLARAGRFDAVDATLRDMSLAGAAAAVPTRACLGALVATYADAGMEAKAAEMCQRAR 215
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
P + L++ V+ R++ LY +M + + +++ G G+
Sbjct: 216 EHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLV 275
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
++ +++ A C P+ N ++ + +G V + G+ P T+
Sbjct: 276 EKGLKLIEARW-GAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGT 334
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
L+ G+K +K++S++ MR+ + P YN+VI+A A +QM A G
Sbjct: 335 LMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGG 394
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA-CIKADDLMEM 445
D TF LI+G G + +R ++ ++ N+S Y ++I C++ + ++
Sbjct: 395 CDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVAS 454
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + M+ H PD TF + G
Sbjct: 455 NLLVEMMERGH-TPDVVTFGALIHGLVVAG 483
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 102/259 (39%), Gaps = 2/259 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
P +Y L+ G+ +A + EM+E G P + AL+ + EA +
Sbjct: 431 NPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALL 490
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M PD Y+ LI L ++M E++V P+ ++ G+
Sbjct: 491 VREKMAAR-QLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGF 549
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ D+ ++ M E PDV N ++ + G ++ R G P+
Sbjct: 550 IRNESLDEARKIFEFM-EQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPD 608
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+ LIG Y K+ S++ M K + Y+++I + +GD E F
Sbjct: 609 EFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFG 668
Query: 381 QMHAEGMKADTKTFCCLIN 399
M ++G+ + T+ LI
Sbjct: 669 SMESQGLFPNVITYTILIG 687
>gi|414872586|tpg|DAA51143.1| TPA: empty pericarp4 [Zea mays]
Length = 595
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 147/324 (45%), Gaps = 11/324 (3%)
Query: 169 EMVEEGIEPTPEL----YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
++VEE ++P L YTALL +CR +DEA L +MK + DV ++TL+
Sbjct: 176 QLVEE-LQPRLPLSLRHYTALLYGWCRQGKLDEAKHVLARMKA-ADVALDVVVFNTLLAG 233
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
V RFE L M++R PN V+ ++ G G G D+ RV M C P
Sbjct: 234 FVAEGRFEDAFELAGQMEQRGCPPNAVSYTTLIQGLGARGRVDEAMRVFVEMRRKG-CAP 292
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
D T T+++ F G++ + + G+ + ++ A+ KK ++ +M
Sbjct: 293 DAVTYGTLVNTFCKAGKISQGYEFLDAMSRDGLRVDAAVYHGFFVAHEKKEQLEECLELM 352
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
E MR+ + P YN VI +G+ K + +M + G+ TF +++G
Sbjct: 353 ERMRECRCPPDLKIYNVVIRLACRLGETKQAMTLWNEMESAGLSPVVDTFAIVVSGLVGQ 412
Query: 405 GLFHKVISSVR--LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
GL + S + + L + +++A ++ + L + V+K + K C +
Sbjct: 413 GLLIEACSYFKDMVGRGLFVVPQYGVLKDLLNALVRDEKLELAKDVWKCIVSKGCELNVS 472
Query: 463 TFSIMTEA-YAKEGMNDK-VYALE 484
++I A +AK+ + + +Y L+
Sbjct: 473 AWTIWIHALFAKKHVKEACLYCLD 496
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/197 (17%), Positives = 79/197 (40%)
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
+L + +G++D + + + + + FN L+ + + ++ + M +
Sbjct: 193 TALLYGWCRQGKLDEAKHVLARMKAADVALDVVVFNTLLAGFVAEGRFEDAFELAGQMEQ 252
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
P + +Y +I+ G F +M +G D T+ L+N + AG +
Sbjct: 253 RGCPPNAVSYTTLIQGLGARGRVDEAMRVFVEMRRKGCAPDAVTYGTLVNTFCKAGKISQ 312
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+ S+ + + + Y+ A K + L E + +RM+E C PD + ++++
Sbjct: 313 GYEFLDAMSRDGLRVDAAVYHGFFVAHEKKEQLEECLELMERMRECRCPPDLKIYNVVIR 372
Query: 470 AYAKEGMNDKVYALEQE 486
+ G + L E
Sbjct: 373 LACRLGETKQAMTLWNE 389
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 2/165 (1%)
Query: 136 EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI 195
EQ P +Y L+ LG G+ + A +VF EM +G P Y L+ +C+ I
Sbjct: 251 EQRGCPPNAVSYTTLIQGLGARGRVDEAMRVFVEMRRKGCAPDAVTYGTLVNTFCKAGKI 310
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI 255
+ + L+ M + + D Y A + E L + M E P+ N+
Sbjct: 311 SQGYEFLDAM-SRDGLRVDAAVYHGFFVAHEKKEQLEECLELMERMRECRCPPDLKIYNV 369
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
V+ + G Q + + M ESA P V T ++S +G
Sbjct: 370 VIRLACRLGETKQAMTLWNEM-ESAGLSPVVDTFAIVVSGLVGQG 413
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 165/374 (44%), Gaps = 20/374 (5%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
NTV F + + AL + ++E+ P + TY ++ K G+ + A KVF+
Sbjct: 189 NTVIAGFCS---RGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFD 245
Query: 169 EMVEEG-IEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC-V 226
EM+ +G ++P +Y AL+ YC +D A + ++M V TY+ L+ A +
Sbjct: 246 EMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE-RGVAMTVATYNLLVHALFM 304
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
D E E L ++M + + + T NI++ G+ K G + + M + V
Sbjct: 305 DGRGTEAYE-LVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGV-RATV 362
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
T +++ + KGQV ++ +++ GI P+ +N LI ++ D+ +M
Sbjct: 363 VTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 422
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M K + TYN ++ +G ++M G++ D T+ LI+GY+ G
Sbjct: 423 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKG- 481
Query: 407 FHKVISSVRLASKLQIAENVSF------YNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
V ++R+ +++ N F YNA+I K + E + K M E PD
Sbjct: 482 --DVKDALRIRNEMM---NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPD 536
Query: 461 SETFSIMTEAYAKE 474
T+ + E E
Sbjct: 537 DSTYISLIEGLTTE 550
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 137/331 (41%), Gaps = 6/331 (1%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
T+ +L L +G+P A ++ +M P Y ++A +C + A + +M
Sbjct: 156 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 211
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS-VTPNTVTQNIVLGGYGKAG 264
+ P+ YTY T+I R + ++ +M + V P V N ++GGY G
Sbjct: 212 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 271
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
D M+E V T N ++ G+ E+ G+ + T+
Sbjct: 272 KLDTALLYRDRMVERGVAM-TVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTY 330
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
NILI + K+ K + E M + T TY ++I A S G + + F++
Sbjct: 331 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 390
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
G++ D + LIN ++ +G + + K +IA + YN ++ + E
Sbjct: 391 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 450
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++ M ++ +PD T++ + Y+ +G
Sbjct: 451 ARKLIDEMTKRGIQPDLVTYNTLISGYSMKG 481
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 104/240 (43%), Gaps = 1/240 (0%)
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMER 307
PN VT N V+ G+ G ++ M E P+ +T T++S + G+VD +
Sbjct: 183 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 242
Query: 308 WYEKFRNFG-IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+++ G + PE +N LIG Y + D + M + T +TYN ++ A
Sbjct: 243 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 302
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G E+M +G+ D T+ LING+ G K + S+ + V
Sbjct: 303 FMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 362
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
Y ++I A K + E ++++ + RPD ++ + +++ G D+ + + E
Sbjct: 363 VTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 422
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 121/286 (42%), Gaps = 3/286 (1%)
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS-VTPNTVTQNIVLGGY 260
L ++ +P +P+ TY+T+I R + + ++M ER + PN T V+ G+
Sbjct: 174 LELLRQMP--RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGW 231
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G D+ +V ML KP+ N ++ + ++G++D + ++ G+
Sbjct: 232 CKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMT 291
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+N+L+ A + ++E M TYN +I G+ K FE
Sbjct: 292 VATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFE 351
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
M G++A T+ LI + G + A + I ++ YNA+I++ +
Sbjct: 352 NMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSG 411
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
++ + M++K PD T++ + G D+ L E
Sbjct: 412 NIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 457
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 117/274 (42%), Gaps = 6/274 (2%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ L G+ A ++ EM +G+ Y L+ +C+ + +A M
Sbjct: 294 TYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENM 353
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ + V TY++LI A + + + L+ + R + P+ V N ++ + +G
Sbjct: 354 -SRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 412
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D+ ++ G +E PD T NT++ G+VD + ++ GI P+ T+N
Sbjct: 413 IDRAFEIM-GEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYN 471
Query: 326 ILIGAYG-KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
LI Y K + D + E M K F T TYN +I+ G E ++M
Sbjct: 472 TLISGYSMKGDVKDALRIRNEMMNK-GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 530
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
G+ D T+ LI G + I RLA+
Sbjct: 531 NGITPDDSTYISLIEGLTTED--ERAIDDERLAA 562
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 160/347 (46%), Gaps = 8/347 (2%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+ + +Y L+ L K+G+ A +V ++ ++P +Y ++ + C++ L+ A
Sbjct: 165 FHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHAS 224
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
++M + PDV TY+TLI C+ R + L+ M +++ P+ T NI++ G
Sbjct: 225 DLCSEM-IVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDG 283
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K G + VL+ M++ ++ T N+++ + Q + + G+ P
Sbjct: 284 LCKEGEMKKARNVLAVMIKQGV-DSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTP 342
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ ++++I+I K +M D+ ++ + M + TYN++I+ G
Sbjct: 343 DVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLV 402
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISAC 436
+MH G AD T+ L++ H+V ++ L +K++ I N+ Y ++
Sbjct: 403 NEMHNRGQPADVITYSSLLDALCKN---HQVDKAITLITKIKDQGIQPNIYTYTILVDGL 459
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
K L + + VY+ + K D + +++M KEG+ D+ +L
Sbjct: 460 CKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSL 506
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 131/356 (36%), Gaps = 75/356 (21%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P T+ L+ L K G+ + AR V M+++G++ Y +L+ Y ++A
Sbjct: 271 KPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATF 330
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
N M PDV +YS +I + L+++M +S+ PNTVT N ++ G
Sbjct: 331 VFNTMAR-RGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGL 389
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G +++ M DV T +++L QVD K ++ GI P
Sbjct: 390 LKYGRISDAWDLVNEMHNRGQ-PADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPN 448
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+ IL+ K G K + ++
Sbjct: 449 IYTYTILVDGLCKN-----------------------------------GRLKDAQAVYQ 473
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+ +G D K + ++NG GLF + +S V
Sbjct: 474 DLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLV-------------------------- 507
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
+M++ C PD+ T+ + A + NDK L +E M+++ S
Sbjct: 508 ---------SKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLRE---MIVQGSA 551
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/341 (19%), Positives = 132/341 (38%), Gaps = 40/341 (11%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
YT L ++ N +D+A + N + + N ++ ++ ++ + V F + + M
Sbjct: 33 YTQPLPSFIDN--VDDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQM 90
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ + + P+ T NI++ + G + VL+ + + PD T+ T++ G+
Sbjct: 91 ELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGF-HPDTVTITTLIKGLCLNGK 149
Query: 302 V--------DMMERWYE---------------------------KFRNFGIDPETRTFNI 326
V D++ + + K + P +N
Sbjct: 150 VREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNT 209
Query: 327 LIGAYGKKRMYDKMSSVM-EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
+I + K ++ S + E + K FP TY +I +G K F QM +
Sbjct: 210 IIDSLCKDKLVIHASDLCSEMIVKRIFP-DVVTYTTLIYGCLIVGRLKEAVGLFNQMLLK 268
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
+K D TF L++G G K + + + K + N+ YN+++ +
Sbjct: 269 NIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKA 328
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
V+ M + PD +++SIM K M D+ L +E
Sbjct: 329 TFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKE 369
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 146/319 (45%), Gaps = 8/319 (2%)
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVT-LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELI 234
+P LY LL + R ++ FV+ L + L P+ YT++ LI+A D+ +
Sbjct: 109 KPGIYLYNVLLESCIRERRVE--FVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAA 166
Query: 235 ETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILS 294
L+ +M E+ PN T I++ GY KAG+ D+ +L+ M ES P+ NTI+S
Sbjct: 167 RELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSM-ESFGVLPNKVVYNTIVS 225
Query: 295 VFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY---GKKRMYDKMSSVMEYMRKLQ 351
F +G+ D E+ EK R G+ P+ TFN I A GK ++ S ME L
Sbjct: 226 SFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLG 285
Query: 352 FPWTSS-TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
P +S TYN +++ F +G + + FE + +++ + G G F +
Sbjct: 286 LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEA 345
Query: 411 ISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
+ ++ I ++ YN ++ K L + + + MK PD+ T+ +
Sbjct: 346 ETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHG 405
Query: 471 YAKEGMNDKVYALEQEKLQ 489
Y G D +L QE ++
Sbjct: 406 YCSVGKVDAAKSLLQEMMR 424
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 147/341 (43%), Gaps = 4/341 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P+ T+ L+ L S + AR++F+EM E+G +P + L+ YC+ L D+
Sbjct: 145 PETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL 204
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
LN M++ P+ Y+T++ + R + E L + M E + P+ VT N +
Sbjct: 205 LNSMESF-GVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALC 263
Query: 262 KAGMFDQMERVLSGM-LES--ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
K G R+ S M L+ +P+ T N +L F G ++ + +E R
Sbjct: 264 KEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDL 323
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
+++NI + + + + +V++ M + +YN +++ +G +
Sbjct: 324 VSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTI 383
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
M G+ D T+ CL++GY + G S ++ + N N ++ +
Sbjct: 384 VGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWN 443
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+ E E + ++M EK D+ T +I+ + G DK
Sbjct: 444 MGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDK 484
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/396 (20%), Positives = 170/396 (42%), Gaps = 25/396 (6%)
Query: 116 SDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLG--KSGQPELARKVFNEMVEE 173
S+H+ K A F+ ++ + F + K G Y+ ++L + + E ++ +MV
Sbjct: 88 SNHIDK-----AFPQFQFVRSR-FPENKPGIYLYNVLLESCIRERRVEFVSWLYKDMVLC 141
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
GI P + L+ A C +S +D A ++M C+P+ +T+ L++ A +
Sbjct: 142 GISPETYTFNLLIRALCDSSCVDAARELFDEMPE-KGCKPNEFTFGILVRGYCKAGLTDK 200
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
L M+ V PN V N ++ + + G D E+++ M E PD+ T N+ +
Sbjct: 201 GLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLV-PDIVTFNSRI 259
Query: 294 SVFANKGQVDMMERWY---EKFRNFGI-DPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
S +G+V R + E G+ P + T+N+++ + K + + ++ E +R+
Sbjct: 260 SALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRE 319
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
+ +YN ++ G E +QM +G+ ++ L++G G+
Sbjct: 320 NDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSD 379
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+ V L + ++ + Y ++ + + + + M +C P++ T +I+
Sbjct: 380 AKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLH 439
Query: 470 AYAKEG-----------MNDKVYALEQEKLQMLLEA 494
+ G MN+K Y L+ ++++
Sbjct: 440 SLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDG 475
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 130/331 (39%), Gaps = 23/331 (6%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P +Y L+ L K G A+ + M G+ P Y LL YC +D A
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L +M NC P+ YT + L+ + + R E L + M+E+ +TVT NI++ G
Sbjct: 419 LQEMMR-NNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLC 477
Query: 262 KAGMFDQMERVLSGM----------------------LESATCKPDVWTMNTILSVFANK 299
+G D+ ++ GM L C PD+ T +T+L+
Sbjct: 478 GSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKA 537
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G+ + + + + P++ +NI I + K+ V++ M K + TY
Sbjct: 538 GRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETY 597
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
N++I + ++M +G+ + T+ I G + + +
Sbjct: 598 NSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQ 657
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYK 450
IA NV + +I A K D + V++
Sbjct: 658 KNIAPNVFSFKYLIGAFCKVPDFDMAQEVFE 688
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/408 (19%), Positives = 158/408 (38%), Gaps = 66/408 (16%)
Query: 132 EMLKEQP--FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
E+ E P +P E T+ L+ K+G + ++ N M G+ P +Y +++++
Sbjct: 168 ELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSF 227
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVT-- 247
CR D++ + +M+ PD+ T+++ I A + ++ DM+
Sbjct: 228 CREGRNDDSEKLVEKMRE-EGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGL 286
Query: 248 --PNTVTQNIVLGGYGKAGM-----------------------------------FDQME 270
PN++T N++L G+ K G+ F + E
Sbjct: 287 PRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAE 346
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
VL M++ P +++ N ++ G + + + G+ P+ T+ L+
Sbjct: 347 TVLKQMIDKGI-GPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHG 405
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
Y D S+++ M + + T N ++ + +MG E +M+ +G D
Sbjct: 406 YCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLD 465
Query: 391 TKTFCCLINGYANAGLFHKVISSVR-------------------LASKLQIAEN----VS 427
T T +++G +G K I V+ L I N +
Sbjct: 466 TVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLI 525
Query: 428 FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
Y+ +++ KA E + ++ M + +PDS ++I + K+G
Sbjct: 526 TYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQG 573
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 103/216 (47%), Gaps = 2/216 (0%)
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID--P 319
+A M +++E + + +L S+ K + ++ +++S+FA +D ++ R+ + P
Sbjct: 51 RAKMHEEIEELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQFVRSRFPENKP 110
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+N+L+ + ++R + +S + + M + T+N +I A D F
Sbjct: 111 GIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELF 170
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
++M +G K + TF L+ GY AGL K + + + N YN ++S+ +
Sbjct: 171 DEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCRE 230
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ E++ ++M+E+ PD TF+ A KEG
Sbjct: 231 GRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEG 266
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 107/253 (42%), Gaps = 9/253 (3%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
EM+ E+ QP Y + K G+ A +V +M ++G + E Y +L+
Sbjct: 549 EMMGEK--LQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGI 606
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
+ I E +++M+ P++ TY+T I+ + + E L +M ++++ PN
Sbjct: 607 KNQIFEIHGLMDEMRE-KGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVF 665
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM--NTILSVFANKGQVDMMERWY 309
+ ++G + K FD + V + K ++++ N +L+ GQ+
Sbjct: 666 SFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAA----GQLLKATELL 721
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
E + G + T + L+ + KK + S ++ M + + + VI+ M
Sbjct: 722 EAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALMPVIDGLGKM 781
Query: 370 GDAKHMEYTFEQM 382
G+ K E+M
Sbjct: 782 GNKKEANNFAEKM 794
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/434 (21%), Positives = 182/434 (41%), Gaps = 70/434 (16%)
Query: 108 VNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
+ T++ + + K+ A+ + + + E Y+P T+ L+ L + A +
Sbjct: 153 IVTLSSLLNGYCHSKRISDAVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
++MV+ G +P Y ++ C+ ID A LN+M+ + +V ++T+I +
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEA-ARIKANVVIFNTIIDSLCK 270
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
E+ L+ +M+ + + PN VT N ++ G + R+LS MLE P+V
Sbjct: 271 YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI-NPNVV 329
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG-------KKRMY--- 337
T N ++ F +G++ E+ +E+ IDP+T T+N+LI + K+M+
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389
Query: 338 ---DKMSSVMEY----------------------MRKLQFPWTSSTYNNVIEAFSDMGDA 372
D + ++ Y M + + TY +I+ F GD
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC 449
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAG----------------------LFHKV 410
+ F+QM + + D T+ L++G + G +++ +
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM 509
Query: 411 ISSVRLASK----------LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
I + A K L I +V YN +IS L E + ++++MKE P+
Sbjct: 510 IEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPN 569
Query: 461 SETFSIMTEAYAKE 474
S T++ + A ++
Sbjct: 570 SGTYNTLIRANLRD 583
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 146/337 (43%), Gaps = 10/337 (2%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY + + Q LA V +M++ G EP ++LL YC + I +A ++QM
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ +PD +T++TLI + L M +R P+ VT V+ G K G
Sbjct: 180 VEMGY-KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D +L+ M E+A K +V NTI+ V++ + + GI P T+N
Sbjct: 239 IDLALNLLNKM-EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
LI + S ++ M + + T+N +I+AF G E E+M
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE----NVSFYNAVISACIKADD 441
+ DT T+ LING+ H + + K +++ N+ YN +I+ K
Sbjct: 358 SIDPDTITYNLLINGFC----MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ + +++ M ++ ++ T++ + + + + G D
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCD 450
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 146/351 (41%), Gaps = 46/351 (13%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
A+ +F +M+K +PF P + KLL + K + EL + +M GI Y+
Sbjct: 66 DAVDLFGDMVKSRPF--PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
+ +CR S + A L +M L +PD+ T S+L+ + R L M E
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGY-EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
P+T T ++ G + ++ M++ C+PD+ T T+++ +G +D+
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGTVVNGLCKRGDIDL 241
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
K I FN +I + K R +E
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRH--------------------------VE 275
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL---Q 421
D+ F +M +G++ + T+ LIN N G + + RL S + +
Sbjct: 276 VAVDL---------FTEMETKGIRPNVVTYNSLINCLCNYGRWS---DASRLLSNMLEKK 323
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
I NV +NA+I A K L+E E++++ M ++ PD+ T++++ +
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFC 374
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 150/362 (41%), Gaps = 48/362 (13%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W A ++ + E+ P T+ L+ K G+ A K+ EM++ I+P Y
Sbjct: 308 RWSDASRLLSNMLEKKI-NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITY 366
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
L+ +C ++ +DEA M + +C P++ TY+TLI R E L+++M
Sbjct: 367 NLLINGFCMHNRLDEAKQMFKFMVS-KDCLPNIQTYNTLINGFCKCKRVEDGVELFREMS 425
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
+R + NTVT ++ G+ +AG D + V M+ +N+
Sbjct: 426 QRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV-------------------SNRVPT 466
Query: 303 DMMERWYEKFRNFGIDPETRTFNILI---GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
D+M T++IL+ +YGK D + +Y++K + Y
Sbjct: 467 DIM-----------------TYSILLHGLCSYGK---LDTALVIFKYLQKSEMELNIFIY 506
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
N +IE M A + ++ + +K D T+ +I+G + L + R +
Sbjct: 507 NTMIEG---MCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKE 563
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
N YN +I A ++ D + K M+ D+ T S++T +G DK
Sbjct: 564 DGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML-HDGRLDK 622
Query: 480 VY 481
+
Sbjct: 623 SF 624
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 127/281 (45%), Gaps = 9/281 (3%)
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
P + ++ L+ A +FEL+ +L + M ++ + T +I + + + V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI-GAY 331
L+ M++ +PD+ T++++L+ + + ++ ++ G P+T TF LI G +
Sbjct: 141 LAKMMKLGY-EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
+ + ++ V + +++ P TY V+ GD +M A +KA+
Sbjct: 200 LHNKASEAVALVDQMVQRGCQP-DLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANV 258
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDLMEMERV 448
F +I+ + V +V L ++++ I NV YN++I+ + R+
Sbjct: 259 VIFNTIIDSLCK---YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL 315
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
M EK P+ TF+ + +A+ KEG + L +E +Q
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
>gi|27545040|gb|AAO18446.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
gi|108711829|gb|ABF99624.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 863
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 185/406 (45%), Gaps = 17/406 (4%)
Query: 86 SKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEG 145
S P ++ + LE A+ + + A + + + W ++L++F+ ++ Q + +P E
Sbjct: 77 SNLPPRGSIARCLE-TARHRLTLQDFAAVYREFSRRGDWQRSLRLFKYMQRQSWCRPDEH 135
Query: 146 TYMKLLVLLGKSGQPELARK---VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTL 202
+ ++ +LG+ G P L K VF+++ E T YT+L+AAY RN+L +EA L
Sbjct: 136 IHAIVIGVLGRQG-PALLDKCLEVFHDLPSE--SRTALSYTSLIAAYARNALHEEARELL 192
Query: 203 NQMKTLPNCQPDVYTYSTLIKACVDA----MRFELIETLYQDMDER---SVTPNTVTQNI 255
+QMK P TY+T++ AC A + F+++ L+ +M SV P+ T N
Sbjct: 193 DQMKA-SGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDPSPSVRPDLTTYNT 251
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
+L + DQ E +L MLE+ PD + I+ FA G + + + +
Sbjct: 252 LLAAAAVRALSDQSEMLLRTMLEAGVL-PDTASYRHIVDAFAGAGNLSRVAELFAEMSAT 310
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G P+ + L+ A+ + +V+ M+ P T++TY +++ + G +
Sbjct: 311 GHTPDPSAYLGLMEAHTLVGATAEAVAVLRQMQADGCPPTAATYRVLLDLYGRQGRFDGV 370
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
F +M + DT T+ L + + G F +V+ + ++ ++ V+ A
Sbjct: 371 RELFREMRTT-VPPDTATYNVLFRVFGDGGFFKEVVELFQDMLHSEVEPDIDTCENVMVA 429
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
C + + V + + P ++ ++ + EA M ++ Y
Sbjct: 430 CGRGGLHEDAREVLDYITTEGMVPTAKAYTGLVEALGHAAMYEEAY 475
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 137/346 (39%), Gaps = 4/346 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P +Y ++ +G ++F EM G P P Y L+ A+ EA
Sbjct: 279 PDTASYRHIVDAFAGAGNLSRVAELFAEMSATGHTPDPSAYLGLMEAHTLVGATAEAVAV 338
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L QM+ C P TY L+ RF+ + L+++M +V P+T T N++ +G
Sbjct: 339 LRQMQA-DGCPPTAATYRVLLDLYGRQGRFDGVRELFREM-RTTVPPDTATYNVLFRVFG 396
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
G F ++ + ML S +PD+ T ++ G + + G+ P
Sbjct: 397 DGGFFKEVVELFQDMLHSEV-EPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTA 455
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+ + L+ A G MY++ M ++ T TYN + AF+ G + E F +
Sbjct: 456 KAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNALANAFAKGGLFQEAEAIFSR 515
Query: 382 M-HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
M + ++ D +F LI Y + + K + + V++A A
Sbjct: 516 MTNNAAIQKDKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAG 575
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ E + ++ ++ P + +M YA+ Y L +E
Sbjct: 576 VIDESKEQFEELQSMVTVPSIIAYCMMLSLYARNDRWTDAYDLLEE 621
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 143/333 (42%), Gaps = 22/333 (6%)
Query: 69 KEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQAL 128
++G + GV E +R RT + A N + F D K+ +
Sbjct: 363 RQGRFDGVREL----FREMRTTVP----------PDTATYNVLFRVFGDGGFFKEVVELF 408
Query: 129 QVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAA 188
Q +ML + +P T ++V G+ G E AR+V + + EG+ PT + YT L+ A
Sbjct: 409 Q--DMLHSE--VEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTAKAYTGLVEA 464
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM-DERSVT 247
++ +EA+V N M + + P + TY+ L A F+ E ++ M + ++
Sbjct: 465 LGHAAMYEEAYVAFNMMTEIGSL-PTIETYNALANAFAKGGLFQEAEAIFSRMTNNAAIQ 523
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMER 307
+ + + ++ Y + D + M +S PD ++ +L+ + G +D +
Sbjct: 524 KDKDSFDALIEAYCQGAQLDDAVKAYMEMRKS-RFNPDERSLEGVLNAYCIAGVIDESKE 582
Query: 308 WYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA-F 366
+E+ ++ P + +++ Y + + ++E M+ + T ++I+ +
Sbjct: 583 QFEELQSMVTVPSIIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASSTHQVIASMIKGEY 642
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
D + + +EY + + EG + F L++
Sbjct: 643 DDDSNWQMVEYVLDNSNLEGCDYSLRFFNALLD 675
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 105/275 (38%), Gaps = 16/275 (5%)
Query: 140 YQPKEGTYMKLL---VLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLID 196
+ P Y+ L+ L+G + + A V +M +G PT Y LL Y R D
Sbjct: 312 HTPDPSAYLGLMEAHTLVGATAE---AVAVLRQMQADGCPPTAATYRVLLDLYGRQGRFD 368
Query: 197 EAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIV 256
+M+T PD TY+ L + D F+ + L+QDM V P+ T V
Sbjct: 369 GVRELFREMRT--TVPPDTATYNVLFRVFGDGGFFKEVVELFQDMLHSEVEPDIDTCENV 426
Query: 257 LGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR--- 313
+ G+ G+ + V L+ T + V T + G M E Y F
Sbjct: 427 MVACGRGGLHEDAREV----LDYITTEGMVPTAKAYTGLVEALGHAAMYEEAYVAFNMMT 482
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM-RKLQFPWTSSTYNNVIEAFSDMGDA 372
G P T+N L A+ K ++ + ++ M +++ +IEA+
Sbjct: 483 EIGSLPTIETYNALANAFAKGGLFQEAEAIFSRMTNNAAIQKDKDSFDALIEAYCQGAQL 542
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
+ +M D ++ ++N Y AG+
Sbjct: 543 DDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVI 577
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 49/272 (18%), Positives = 105/272 (38%), Gaps = 48/272 (17%)
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ + G + + R+ M + C+PD ++ V +G ++++ E F + +
Sbjct: 108 FSRRGDWQRSLRLFKYMQRQSWCRPDEHIHAIVIGVLGRQGPA-LLDKCLEVFHD--LPS 164
Query: 320 ETRT---FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA---- 372
E+RT + LI AY + ++++ +++ M+ T++TYN V+ A + D
Sbjct: 165 ESRTALSYTSLIAAYARNALHEEARELLDQMKASGVAPTAATYNTVLAACARATDPPVPF 224
Query: 373 KHMEYTFEQMHAE---GMKADTKTFCC--------------------------------- 396
+ F +M + ++ D T+
Sbjct: 225 DMLLGLFAEMRHDPSPSVRPDLTTYNTLLAAAAVRALSDQSEMLLRTMLEAGVLPDTASY 284
Query: 397 --LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
+++ +A AG +V S + S Y ++ A E V ++M+
Sbjct: 285 RHIVDAFAGAGNLSRVAELFAEMSATGHTPDPSAYLGLMEAHTLVGATAEAVAVLRQMQA 344
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
C P + T+ ++ + Y ++G D V L +E
Sbjct: 345 DGCPPTAATYRVLLDLYGRQGRFDGVRELFRE 376
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 137/322 (42%), Gaps = 2/322 (0%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
+GK G+ A + EM +GI P + L+ +C++ + A +M +P
Sbjct: 211 MGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNR-QGVKP 269
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
+V TY++LI + + L M + PN +T N +L G+ K M Q +
Sbjct: 270 NVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELF 329
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
M + P+V T N ++ + ++ Y G+ P+ T+N LI +
Sbjct: 330 DDMPKQGI-TPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCR 388
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
K + +++ M TYN +I++ + G+ K ++M +G+K T
Sbjct: 389 KGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLT 448
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+ +I+GY G ++ K+ NV+ YN +I K D L + + M
Sbjct: 449 YNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEML 508
Query: 454 EKHCRPDSETFSIMTEAYAKEG 475
EK P+ T+ I+TE ++G
Sbjct: 509 EKGLIPNRMTYEIVTEEMMEKG 530
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 146/331 (44%), Gaps = 8/331 (2%)
Query: 148 MKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKT 207
M LV +G+ G E V+ EM+ IEPT + ++ C+ +++A + MK
Sbjct: 135 MSGLVKVGEIGDMEF---VYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMK- 190
Query: 208 LPNCQPDVYTYSTLIKACVDAMRFELI---ETLYQDMDERSVTPNTVTQNIVLGGYGKAG 264
+ +V TY+TLI + + + + ++M + PN VT NI++ G+ K
Sbjct: 191 VRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDK 250
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
+V + M KP+V T N++++ N G+V+ ++ N + P T
Sbjct: 251 NVSAAMKVFAEMNRQGV-KPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITH 309
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
N L+ + K +M + + + M K +TYN +I+A+ + + + M
Sbjct: 310 NALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLG 369
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
+G+ D T+ CLI G G + V + ++ YN +I + ++ +
Sbjct: 370 KGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKK 429
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
R+ M K +P T++ M + Y KEG
Sbjct: 430 ALRLLDEMCRKGLKPSQLTYNTMIDGYCKEG 460
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 121/273 (44%), Gaps = 3/273 (1%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K A++VF + Q +P TY L+ L +G+ A + ++MV ++P
Sbjct: 250 KNVSAAMKVFAEMNRQGV-KPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIIT 308
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+ ALL +C+N ++ +A + M P+V TY+ LI A E LY+ M
Sbjct: 309 HNALLNGFCKNKMVKQAGELFDDMPK-QGITPNVTTYNILIDAYCKDENMEDAFALYRIM 367
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ V P+ T N ++ G + G + ++S M ++ K D+ T N ++ NKG+
Sbjct: 368 LGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEM-DTKHLKADLITYNILIDSLCNKGE 426
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ R ++ G+ P T+N +I Y K+ ++ M K+ +TYN
Sbjct: 427 MKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNV 486
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
+I+ F + +M +G+ + T+
Sbjct: 487 LIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTY 519
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 2/236 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P T+ LL K+ + A ++F++M ++GI P Y L+ AYC++ +++AF
Sbjct: 303 KPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFA 362
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
M C PDV TY+ LI E L +MD + + + +T NI++
Sbjct: 363 LYRIMLGKGVC-PDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSL 421
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
G + R+L M KP T NT++ + +G + + G
Sbjct: 422 CNKGEMKKALRLLDEMCRKGL-KPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLAN 480
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME 376
T+N+LI + KK + + ++ M + TY V E + G +E
Sbjct: 481 VATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPDIE 536
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 9/200 (4%)
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
K V + N ++S G++ ME Y++ I+P +FNI+I K +K
Sbjct: 125 KLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGD 184
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM---EYTFEQMHAEGMKADTKTFCCLIN 399
++E M+ TYN +I+ + MG M + ++M A+G+ + TF LI+
Sbjct: 185 IIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILID 244
Query: 400 GYA---NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
G+ N KV + + ++ + NV YN++I+ + E + +M
Sbjct: 245 GFCKDKNVSAAMKVFAEM---NRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSC 301
Query: 457 CRPDSETFSIMTEAYAKEGM 476
+P+ T + + + K M
Sbjct: 302 LKPNIITHNALLNGFCKNKM 321
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 126/262 (48%), Gaps = 15/262 (5%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
P E T+ L+ + A+KVF EM +G++P Y +L+ C N +DEA
Sbjct: 296 HPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALG 355
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
++M + +P+V TY+ LI C M E E L D+ +R + PN +T N ++
Sbjct: 356 LQDKMSGM-GLKPNVVTYNALINGFCKKKMLKEAREML-DDIGKRGLAPNVITFNTLIDA 413
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
YGKAG D + S ML++ C P+V T N ++ F +G V + ++ G+
Sbjct: 414 YGKAGRMDDAFLLRSMMLDTGVC-PNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKA 472
Query: 320 ETRTFNILIGAYGKK-------RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
+ T+NIL+ A KK R+ D+M+ + + R+ TYN +I+ F + G
Sbjct: 473 DLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANI----VTYNVLIKGFCNKGKL 528
Query: 373 KHMEYTFEQMHAEGMKADTKTF 394
+ +M +G+ + T+
Sbjct: 529 EEANRLLNEMLEKGLIPNRTTY 550
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 149/366 (40%), Gaps = 44/366 (12%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
+LV L K G+ + V+ EM+ I + ++ C+ +A + MK
Sbjct: 200 MLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAW- 258
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGK------- 262
P V TY+T+I A + + L ++M + + PN +T NI++ G+ +
Sbjct: 259 GFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAA 318
Query: 263 AGMFDQMER------------VLSGM---------------LESATCKPDVWTMNTILSV 295
+F++M+R +++G+ + KP+V T N +++
Sbjct: 319 KKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALING 378
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
F K + + G+ P TFN LI AYGK D + M
Sbjct: 379 FCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPN 438
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
STYN +I F G+ K ++M G+KAD T+ L++ G K +VR
Sbjct: 439 VSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRK---AVR 495
Query: 416 LASKLQIAE------NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
L ++ + E N+ YN +I L E R+ M EK P+ T+ I+ +
Sbjct: 496 LLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRD 555
Query: 470 AYAKEG 475
++G
Sbjct: 556 EMMEKG 561
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 118/284 (41%), Gaps = 3/284 (1%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
+V T+ +I +F+ + +DM +P+ +T N ++ GY KAG + + +L
Sbjct: 228 NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALL 287
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
M+ + P+ T N ++ F V ++ +E+ + G+ P T+N LI
Sbjct: 288 KEMV-AKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCS 346
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
D+ + + M + TYN +I F K + + G+ + T
Sbjct: 347 NGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVIT 406
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
F LI+ Y AG + + NVS YN +I + ++ E ++ K M+
Sbjct: 407 FNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEME 466
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
+ D T++I+ +A K+G K L E L+E G
Sbjct: 467 GNGLKADLVTYNILVDALCKKGETRKAVRLLDE--MTLMEKKGR 508
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 137/318 (43%), Gaps = 19/318 (5%)
Query: 185 LLAAYCRNSLIDEAFVTLNQMK------TLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
L+ AY +N +D A ++ + +C P ++ + V R ++E++Y
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNP-------MLVSLVKEGRIGVVESVY 217
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
++M R + N VT ++V+ G K G F + V+ M ++ P V T NTI+ +
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDM-KAWGFSPSVITYNTIIDGYCK 276
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
G++ + ++ I P TFNILI + + V E M++ T
Sbjct: 277 AGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVT 336
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN++I G ++M G+K + T+ LING+ + + +
Sbjct: 337 YNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIG 396
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
K +A NV +N +I A KA + + + M + P+ T++ + + +EG N
Sbjct: 397 KRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREG-NV 455
Query: 479 KVYALEQEKLQMLLEASG 496
K E KL +E +G
Sbjct: 456 K----EARKLAKEMEGNG 469
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 108/237 (45%), Gaps = 6/237 (2%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A +VFE ++ Q QP TY L+ L +G+ + A + ++M G++P Y AL+
Sbjct: 318 AKKVFEEMQRQGL-QPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALI 376
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+C+ ++ EA L+ + P+V T++TLI A A R + L M + V
Sbjct: 377 NGFCKKKMLKEAREMLDDIGK-RGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGV 435
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PN T N ++ G+ + G + R L+ +E K D+ T N ++ KG+
Sbjct: 436 CPNVSTYNCLIVGFCREGNVKE-ARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAV 494
Query: 307 RWYEK---FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
R ++ G T+N+LI + K ++ + ++ M + +TY+
Sbjct: 495 RLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYD 551
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 63/150 (42%)
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
++L+ AY K D + F ++ + N ++ + G +E +++M
Sbjct: 163 DMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIR 222
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
+ + TF +ING G F K V + +V YN +I KA + +
Sbjct: 223 RRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFK 282
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
+ + K M K P+ TF+I+ + + ++
Sbjct: 283 ADALLKEMVAKRIHPNEITFNILIDGFCRD 312
>gi|302808451|ref|XP_002985920.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
gi|300146427|gb|EFJ13097.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
Length = 574
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 142/326 (43%), Gaps = 2/326 (0%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A F ++Q ++ TY +L +LG++ ++ + +EM+ EG EP Y L+
Sbjct: 50 AYNFFIWARKQAGFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLI 109
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
Y R + +D + N M+ + C+PD TY TLI A + LY+ M
Sbjct: 110 HCYGRANDLDSSLKLFNVMQMV-GCEPDRVTYCTLIDLQAKAGFHDAAMELYRQMQHAGF 168
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P+T T +I++ GKAG + ++ M + P + T N I+ + A G+ DM
Sbjct: 169 RPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGY-APSLVTYNIIIDLHAKAGKFDMAL 227
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ Y + G P+ T+ I++ G + V E M + + + + +++ +
Sbjct: 228 KLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMW 287
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G+A+ F +M G++ + L++ Y + + + +K + +
Sbjct: 288 GKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGMAKWGLYPTL 347
Query: 427 SFYNAVISACIKADDLMEMERVYKRM 452
Y +++S+C E + ++ M
Sbjct: 348 QTYTSLLSSCAACRAAWEYDALFGLM 373
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 143/366 (39%), Gaps = 40/366 (10%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
EM++E +P TY +L+ G++ + + K+FN M G EP Y L+ +
Sbjct: 92 EMIREGC--EPNVVTYNRLIHCYGRANDLDSSLKLFNVMQMVGCEPDRVTYCTLIDLQAK 149
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
D A QM+ +PD +TYS +I A + L+ +M +R P+ V
Sbjct: 150 AGFHDAAMELYRQMQH-AGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLV 208
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD-------M 304
T NI++ + KAG FD ++ S + E PD T I+ V N G ++
Sbjct: 209 TYNIIIDLHAKAGKFDMALKLYSDLQEVGY-APDRVTYGIIMEVLGNCGHIEDAEQVFEE 267
Query: 305 MER----------------------------WYEKFRNFGIDPETRTFNILIGAYGKKRM 336
MER W+ + + G+ P N L+ AY +
Sbjct: 268 MERAGWVADNPIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSF 327
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
YD V+ M K T TY +++ + + A + F M G A
Sbjct: 328 YDAAGGVLGGMAKWGLYPTLQTYTSLLSSCAACRAAWEYDALFGLMGGTGHPAHPFVCSL 387
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAEN-VSFYNAVISACIKADDLMEMERVYKRMKEK 455
L +G G I A + + E+ F +++I +A + V++ EK
Sbjct: 388 LASGGTAGGTMVVGIRCFFDAMQFEELESRRGFADSLIDFLHRAGKAVAAGSVWEVAAEK 447
Query: 456 HCRPDS 461
+ P++
Sbjct: 448 NLYPNA 453
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 97/231 (41%), Gaps = 7/231 (3%)
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
T +LG G+A FD + +L M+ C+P+V T N ++ + +D + +
Sbjct: 69 TYTTILGILGRAKSFDVLNNLLDEMIREG-CEPNVVTYNRLIHCYGRANDLDSSLKLFNV 127
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
+ G +P+ T+ LI K +D + M+ F + TY+ +I G
Sbjct: 128 MQMVGCEPDRVTYCTLIDLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSIIIHCLGKAGK 187
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSF 428
F +M G T+ +I+ +A AG F +++L S LQ A +
Sbjct: 188 LNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDM---ALKLYSDLQEVGYAPDRVT 244
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
Y ++ + + E+V++ M+ D+ F +M + + K G +K
Sbjct: 245 YGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEK 295
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 96/234 (41%), Gaps = 9/234 (3%)
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
V G + G D+ R L+G+ S + + +N IL G W K
Sbjct: 8 VCGILNQHGWGDETVRALAGLNASL----NAYQVNEILKQQKEAGVAYNFFIWARK--QA 61
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G + T+ ++G G+ + +D ++++++ M + TYN +I + D
Sbjct: 62 GFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSS 121
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
F M G + D T+C LI+ A AG + R + Y+ +I
Sbjct: 122 LKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSIIIHC 181
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND---KVYALEQE 486
KA L +++ M ++ P T++I+ + +AK G D K+Y+ QE
Sbjct: 182 LGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQE 235
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 77/198 (38%)
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
+ A K DV T TIL + D++ ++ G +P T+N LI YG+
Sbjct: 59 KQAGFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDL 118
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
D + M+ + TY +I+ + G + QM G + DT T+ +
Sbjct: 119 DSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSII 178
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
I+ AG + + A ++ YN +I KA ++Y ++E
Sbjct: 179 IHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGY 238
Query: 458 RPDSETFSIMTEAYAKEG 475
PD T+ I+ E G
Sbjct: 239 APDRVTYGIIMEVLGNCG 256
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 132/275 (48%), Gaps = 3/275 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL++F + + +P Y L+ L G A +V NEM EEG P + Y +
Sbjct: 346 RALELFNEAQAKGI-KPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 404
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ I +A V +N + PDV+T++TLI ++ + L + M E
Sbjct: 405 INGLCKMGNISDATVVMND-AIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 463
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+T+T N VL G KAG +++ M+ C P+ T N ++ F +++
Sbjct: 464 IAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKG-CHPNPITYNILIENFCRSNKMEEA 522
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ K G+ P+ +FN LI + + + + + + + + T+ T+N +I A
Sbjct: 523 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGA 582
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
FS + E F++M ++G +AD+ T+ LI+G
Sbjct: 583 FSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDG 617
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 136/331 (41%), Gaps = 2/331 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L K P+ A M+ +G P Y ++ YC+ S++ EA
Sbjct: 256 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 315
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L PD TY +LI E L+ + + + P+ V N ++ G
Sbjct: 316 LKD-AVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLC 374
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
G+ +V++ M E C PD+ T N +++ G + G P+
Sbjct: 375 LQGLILHALQVMNEMAEEG-CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDV 433
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
TFN LI Y K+ D ++E M + + TYN+V+ G + TF++
Sbjct: 434 FTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQE 493
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M +G + T+ LI + + + + S+ + + +N +I + D
Sbjct: 494 MILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGD 553
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
L ++++++EK ++TF+ + A++
Sbjct: 554 LEGAYLLFQKLEEKGYSATADTFNTLIGAFS 584
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 152/353 (43%), Gaps = 14/353 (3%)
Query: 126 QALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
A Q+F+ ML F P + K+L L K G A + ++++ G+ Y
Sbjct: 172 DARQLFDQMLHTHVF--PNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 229
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDE 243
+ C + EA ++ M+ PDV TY+TLI+ C +M E + L + M++
Sbjct: 230 WIRGLCEAGRLPEAVRLVDGMRAYA--VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ 287
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
P+ T N ++ GY K M + +L + PD T ++++ +G V+
Sbjct: 288 -GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFV-PDQVTYCSLINGLCAEGDVE 345
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ + + GI P+ +N L+ + + VM M + TYN VI
Sbjct: 346 RALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVI 405
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL--- 420
MG+ +G D TF LI+GY K+ S+++L ++
Sbjct: 406 NGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKR---LKLDSALQLVERMWEY 462
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
IA + YN+V++ KA + E+ ++ M K C P+ T++I+ E + +
Sbjct: 463 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCR 515
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 137/352 (38%), Gaps = 25/352 (7%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P Y ++ L + + A KV+ M+ G+ P +T L ++C L +
Sbjct: 86 PAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFC---LTARPHIA 142
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L ++ LP Y T++ L+ M V PN N VL
Sbjct: 143 LRLLRALP--HRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALC 200
Query: 262 KAGMFDQMER-VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G D +E +L G + +++T N + G++ R + R + + P+
Sbjct: 201 KRG--DVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PD 257
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ----FPWTSSTYNNVIEAFSDMGDAKHME 376
T+N LI KK M + M Y+R++ P TYN +I+ + + +
Sbjct: 258 VVTYNTLIRGLCKKSMPQE---AMHYLRRMMNQGCLP-DDFTYNTIIDGYCKISMVQEAT 313
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
+ +G D T+C LING G + + A I ++ YN+++
Sbjct: 314 ELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGL 373
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG--------MNDKV 480
++ +V M E+ C PD +T++I+ K G MND +
Sbjct: 374 CLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAI 425
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 96/261 (36%), Gaps = 10/261 (3%)
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y I+A A R ++ MD + P N ++ A DQ +V ML
Sbjct: 56 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 115
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
+A PD+ T L F + + R + G ++ G Y +
Sbjct: 116 -AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG---AVAYCTVVCGLYAHGHTH 171
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
D + + FP ++ +N V+ A GD ++ GM + T+
Sbjct: 172 DARQLFDQMLHTHVFPNLAA-FNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 230
Query: 398 INGYANAGLFHKVISSVRLASKLQI--AENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
I G AG ++ +VRL ++ +V YN +I K E +RM +
Sbjct: 231 IRGLCEAG---RLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ 287
Query: 456 HCRPDSETFSIMTEAYAKEGM 476
C PD T++ + + Y K M
Sbjct: 288 GCLPDDFTYNTIIDGYCKISM 308
>gi|224109914|ref|XP_002333182.1| predicted protein [Populus trichocarpa]
gi|222835036|gb|EEE73485.1| predicted protein [Populus trichocarpa]
Length = 319
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 147/335 (43%), Gaps = 46/335 (13%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ L K G+ A+ + M+E+G+EP Y++L+ Y + + EA
Sbjct: 8 PDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKV 67
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY- 260
N M T C PDV +Y+ LI C A R + + ++ +M R + PNT T N +LGG+
Sbjct: 68 FNAMIT-RGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGFW 126
Query: 261 -GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K +F M + C PD+ T + L + +G +D + + +N ++P
Sbjct: 127 KQKIQLFKDM--------HAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNP 178
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ +NILI A K S +E R+L F
Sbjct: 179 DLVIYNILIDAMCK-------SGKLEDAREL----------------------------F 203
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
++H +G+ D +++ +I+G GL + + R + + YN ++ ++
Sbjct: 204 LKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQMERDGCPPDCCSYNVIVRGFLQN 263
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
+ E++++ M ++ D+ T ++ + +K+
Sbjct: 264 NGASRAEQLFQEMFDRGFSADALTRTLAADLLSKD 298
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 112/269 (41%), Gaps = 41/269 (15%)
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
PD T++ L+ + + + + M E+ V PNTVT + ++ GY + +V
Sbjct: 8 PDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKV 67
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
+ M+ C PDV + N +++ ++D ++ +++ G+ P T T+N L+G +
Sbjct: 68 FNAMITRG-CIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGFW 126
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K++ I+ F DM HA+G D
Sbjct: 127 KQK---------------------------IQLFKDM-------------HAQGCSPDLV 146
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
T+ ++G + G + + R + ++ YN +I A K+ L + ++ ++
Sbjct: 147 TYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVIYNILIDAMCKSGKLEDARELFLKL 206
Query: 453 KEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
K PD +++ + +EG+ D+ Y
Sbjct: 207 HVKGLLPDVRSWTSIISGLCREGLLDEAY 235
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 76/140 (54%), Gaps = 4/140 (2%)
Query: 118 HVLKKQWF--QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
H L KQ + QAL++F ++ + P Y L+ + KSG+ E AR++F ++ +G+
Sbjct: 153 HGLSKQGYLDQALELFREMQNN-YLNPDLVIYNILIDAMCKSGKLEDARELFLKLHVKGL 211
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
P +T++++ CR L+DEA+ QM+ C PD +Y+ +++ + E
Sbjct: 212 LPDVRSWTSIISGLCREGLLDEAYKAFRQMER-DGCPPDCCSYNVIVRGFLQNNGASRAE 270
Query: 236 TLYQDMDERSVTPNTVTQNI 255
L+Q+M +R + + +T+ +
Sbjct: 271 QLFQEMFDRGFSADALTRTL 290
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 5/173 (2%)
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
+F I P+ TFNIL+ KK + +++ M + + TY++++ +
Sbjct: 3 SFIIMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVF 62
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
F M G D ++ LING A + S + N + YN ++
Sbjct: 63 EARKVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLL 122
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
K + +++K M + C PD T+SI +K+G D+ L +E
Sbjct: 123 GGFWK-----QKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFRE 170
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 152/359 (42%), Gaps = 40/359 (11%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H+ + + +AL++F M++ + P E +Y LL L K+ + +LAR + M G+
Sbjct: 383 HISEGNFKEALKMFYMMEAKGL-TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCV 441
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
YT ++ C+N +DEA V LN+M PD+ TYS LI RF+ + +
Sbjct: 442 GRITYTGMIDGLCKNGFLDEAVVLLNEMSK-DGIDPDIVTYSALINGFCKVGRFKTAKEI 500
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM-LESATCKPDVWTMNTILSVF 296
+ ++PN + + ++ + G + R+ M LE T D +T N +++
Sbjct: 501 VCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHT--RDHFTFNVLVTSL 558
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
G+V E + + GI P T +F+ LI YG K SV + M K+ T
Sbjct: 559 CKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTF 618
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
TY ++++ G + E + +HA DT
Sbjct: 619 FTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT------------------------- 653
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
YN +++A K+ +L + ++ M ++ PDS T++ + ++G
Sbjct: 654 ----------VMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG 702
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 144/345 (41%), Gaps = 6/345 (1%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
EMLK + P T+ L+ +L G E + + +M + G PT Y +L YC+
Sbjct: 223 EMLKRK--ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
A L+ MK+ DV TY+ LI + R L +DM +R + PN V
Sbjct: 281 KGRFKAAIELLDHMKS-KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 339
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
T N ++ G+ G ++L+ ML S P+ T N ++ ++G + +
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEML-SFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 398
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
G+ P ++ +L+ K +D M++ TY +I+ G
Sbjct: 399 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 458
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNA 431
+M +G+ D T+ LING+ G F V ++ ++ N Y+
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 518
Query: 432 VISACIKADDLMEMERVYKRM-KEKHCRPDSETFSIMTEAYAKEG 475
+I C + L E R+Y+ M E H R D TF+++ + K G
Sbjct: 519 LIYNCCRMGCLKEAIRIYEAMILEGHTR-DHFTFNVLVTSLCKAG 562
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 141/356 (39%), Gaps = 16/356 (4%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
P E TY L+ G+ +A ++ NEM+ G+ P + AL+ + EA
Sbjct: 335 HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALK 394
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
M+ P +Y L+ F+L Y M V +T ++ G
Sbjct: 395 MFYMMEA-KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGL 453
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G D+ +L+ M + PD+ T + +++ F G+ + + G+ P
Sbjct: 454 CKNGFLDEAVVLLNEMSKDGI-DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPN 512
Query: 321 TRTFNILI------GAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
++ LI G + R+Y+ M ++E + F T+N ++ + G
Sbjct: 513 GIIYSTLIYNCCRMGCLKEAIRIYEAM--ILEGHTRDHF-----TFNVLVTSLCKAGKVA 565
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
E M ++G+ +T +F CLINGY N+G K S +K+ Y +++
Sbjct: 566 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 625
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
K L E E+ K + D+ ++ + A K G K +L E +Q
Sbjct: 626 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQ 681
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 159/405 (39%), Gaps = 18/405 (4%)
Query: 84 YRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPK 143
YR R + + K L K WV +DH+++ +L Y P
Sbjct: 80 YRQARLRLVHGKLAL----KFLKWVVKQPGLETDHIVQLVCITT----HILVRARMYDPA 131
Query: 144 EGTYMKLLVLLGKSGQPELARKVFNEMVE--EGIEPTPELYTALLAAYCRNSLIDEAFVT 201
+L ++ GKS VF ++ P +Y L+ Y R +I ++
Sbjct: 132 RHILKELSLMSGKSSF------VFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEI 185
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
M L P VYT + ++ + V + + + ++M +R + P+ T NI++
Sbjct: 186 FRLMG-LYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLC 244
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
G F++ ++ M E + P + T NT+L + KG+ + ++ G+D +
Sbjct: 245 AEGSFEKSSYLMQKM-EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADV 303
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+N+LI + K ++ MRK TYN +I FS+ G +
Sbjct: 304 CTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNE 363
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M + G+ + TF LI+G+ + G F + + + + + Y ++ K +
Sbjct: 364 MLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAE 423
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
Y RMK T++ M + K G D+ L E
Sbjct: 424 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 468
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 135/346 (39%), Gaps = 1/346 (0%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y LL + KSG A +F EMV+ I P YT+L++ CR A + + +
Sbjct: 656 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 715
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
N P+ Y+ + A +++ + MD TP+ VT N ++ GY + G
Sbjct: 716 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 775
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
++ +L M + P++ T N +L ++ + V Y GI P+ T +
Sbjct: 776 EKTNDLLPEM-GNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHS 834
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
L+ + M + +++ T+N +I G+ + M + G
Sbjct: 835 LVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLG 894
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+ D T +++ F + + SK I+ Y +I+ + D+
Sbjct: 895 ISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAF 954
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLL 492
V + M P + S M A AK G D+ L + L+M L
Sbjct: 955 VVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKL 1000
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 5/213 (2%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P V+T N IL G+ + + ++ I P+ TFNILI + ++K S +
Sbjct: 196 PSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYL 255
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
M+ M K + T TYN V+ + G K + M ++G+ AD T+ LI+
Sbjct: 256 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 315
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
+ K +R K I N YN +I+ ++ ++ M P+ T
Sbjct: 316 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 375
Query: 464 FSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
F+ + + + EG N K E K+ ++EA G
Sbjct: 376 FNALIDGHISEG-NFK----EALKMFYMMEAKG 403
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 102/262 (38%), Gaps = 8/262 (3%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P + T L++ + +S E+ K+ + G+E + L++ C N I+ AF
Sbjct: 827 PDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL 886
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ M +L D T ++ RF+ + +M ++ ++P + ++ G
Sbjct: 887 VKVMTSL-GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC 945
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD---MMERWYEKFRNFGID 318
+ G V M+ C P+V + ++ A G+ D ++ R+ K + +
Sbjct: 946 RVGDIKTAFVVKEEMIAHKICPPNVAE-SAMVRALAKCGKADEATLLLRFMLKMK---LV 1001
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P +F L+ K + + M +YN +I GD
Sbjct: 1002 PTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFEL 1061
Query: 379 FEQMHAEGMKADTKTFCCLING 400
+E+M +G A+ T+ LI G
Sbjct: 1062 YEEMKGDGFLANATTYKALIRG 1083
>gi|414880641|tpg|DAA57772.1| TPA: hypothetical protein ZEAMMB73_835994 [Zea mays]
Length = 728
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 167/349 (47%), Gaps = 5/349 (1%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSG-QPELARKVFNEMVEEGIEPTPELYTAL 185
A ++FE++ E+ QP GT +L ++ KS + A + F M +G+ + ++ AL
Sbjct: 295 AWEIFELM-EKNNVQPDHGTSAIMLNIMKKSKVSAKDAWEFFKRMNRKGVNWSFDVGAAL 353
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +C + L EA + ++M+ + Y TL+KA + + E E L+ +M E+S
Sbjct: 354 INIFCSDGLKKEALIIQSEMEKR-GIASNTSIYETLMKAYCKSNQIEEAEGLFVEMKEKS 412
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD-M 304
+ T T NI++ Y + + +E +L M + +P + N ++S + + ++
Sbjct: 413 LQATTTTYNILMDAYSRRLQTEVVESLLLEM-QDLGIRPSARSYNCLISAYGRQKKMSGK 471
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
E + + + GI P + ++N L+ AY +++K ++ M++ T TY +++
Sbjct: 472 AENAFLRMKRDGIKPLSSSYNALLFAYAANGLHEKAHAIYMDMKREGLKPTLETYTALLD 531
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
GD + + T++ M E F +I+ A GL+ +V + K+ +
Sbjct: 532 TLRRAGDTEKLMETWKTMVDEKFGGTRVIFHMVIDCLAKHGLYLQVRDVIYEFGKMGLKP 591
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
V YN +++A + ++ ++ K M +PDS T+ M AYA+
Sbjct: 592 TVMTYNILMNAYGRGGQHYKLPQLLKEMTALELKPDSITYCTMIYAYAR 640
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 119/278 (42%), Gaps = 10/278 (3%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A +F +KE+ Q TY L+ + Q E+ + EM + GI P+ Y L
Sbjct: 400 EAEGLFVEMKEKSL-QATTTTYNILMDAYSRRLQTEVVESLLLEMQDLGIRPSARSYNCL 458
Query: 186 LAAYCRNSLI----DEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
++AY R + + AF+ + + +P +Y+ L+ A E +Y DM
Sbjct: 459 ISAYGRQKKMSGKAENAFLRMKR----DGIKPLSSSYNALLFAYAANGLHEKAHAIYMDM 514
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ P T +L +AG +++ M++ V + ++ A G
Sbjct: 515 KREGLKPTLETYTALLDTLRRAGDTEKLMETWKTMVDEKFGGTRV-IFHMVIDCLAKHGL 573
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ +F G+ P T+NIL+ AYG+ + K+ +++ M L+ S TY
Sbjct: 574 YLQVRDVIYEFGKMGLKPTVMTYNILMNAYGRGGQHYKLPQLLKEMTALELKPDSITYCT 633
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+I A++ + D Y +QM G D +++ L+N
Sbjct: 634 MIYAYARVRDFSRAFYYHKQMVRNGQIPDPRSYKKLLN 671
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 13/204 (6%)
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETR---TFNILIGAYGKKRMYDKMSS 342
VW M F + G+ DM + E ++ + R +N I A R YD
Sbjct: 243 VWLM-----AFVSLGRCDMADVVLEIVARLPLERDFREVVLYNAAISAVAYCRRYDGAWE 297
Query: 343 VMEYMRKLQFP---WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+ E M K TS+ N+++ AK F++M+ +G+ LIN
Sbjct: 298 IFELMEKNNVQPDHGTSAIMLNIMK--KSKVSAKDAWEFFKRMNRKGVNWSFDVGAALIN 355
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
+ + GL + + K IA N S Y ++ A K++ + E E ++ MKEK +
Sbjct: 356 IFCSDGLKKEALIIQSEMEKRGIASNTSIYETLMKAYCKSNQIEEAEGLFVEMKEKSLQA 415
Query: 460 DSETFSIMTEAYAKEGMNDKVYAL 483
+ T++I+ +AY++ + V +L
Sbjct: 416 TTTTYNILMDAYSRRLQTEVVESL 439
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 150/330 (45%), Gaps = 6/330 (1%)
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
+ + F EM G P Y ++ YC+ DEAF L M L +P++ T++ +
Sbjct: 1 MGLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMG-LKGLEPNLITFNMI 59
Query: 222 IKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
I C D E E L + M + P+ VT N ++ GY K G F Q + + M+ +
Sbjct: 60 INGLCRDGRLKETSEVLVE-MSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNG 118
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
P+V T ++++ G ++ ++++ G+ P RT+ +I + ++ + D+
Sbjct: 119 L-SPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEA 177
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
V+ M + F + TYN +I +G + + M +G+ D ++ +I+G
Sbjct: 178 YRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISG 237
Query: 401 YA-NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
+A N L V + K + + V+ Y+++I + L E +++ M P
Sbjct: 238 FARNQELDRAFQMKVEMIGKSVLPDAVT-YSSLIQGLCEQRRLTEACDMFQEMLTIKLPP 296
Query: 460 DSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
D T++ + AY KEG +K L E +Q
Sbjct: 297 DEFTYTTLINAYCKEGDLNKALHLHDEMIQ 326
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 162/368 (44%), Gaps = 21/368 (5%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y P E TY L+ K G A + EMV G+ P YT+L+ + C+ ++ A
Sbjct: 84 YVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAM 143
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+QM C P+ TY+T+I + + +M P+ VT N ++ G
Sbjct: 144 EFFDQMHVRGLC-PNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALING 202
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ G ++ +L M+ PDV + +TI+S FA ++D + + + P
Sbjct: 203 HCVLGRMEEAIGLLQDMVGKGVL-PDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLP 261
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ T++ LI ++R + + + M ++ P TY +I A+ GD +
Sbjct: 262 DAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLH 321
Query: 380 EQMHAEGMKADTKTFCCLINGYANAG-----------LFH--KVISSVRLASKLQIAENV 426
++M +G D T+ LING LF+ + S+V + ++ N+
Sbjct: 322 DEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNI 381
Query: 427 SFYNAVI---SACIKADDLM-EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
F +AV C+K LM E ++V++ M K+ +P+ ++++ + + G K Y
Sbjct: 382 EFKSAVALVKGFCMKG--LMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYK 439
Query: 483 LEQEKLQM 490
L +E + +
Sbjct: 440 LYKEMVHV 447
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 149/354 (42%), Gaps = 17/354 (4%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ + K+G A + F++M G+ P YT ++ + + L+DEA+
Sbjct: 121 PNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRV 180
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
LN+M T P + TY+ LI R E L QDM + V P+ V+ + ++ G+
Sbjct: 181 LNEM-TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFA 239
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ D+ ++ M+ + PD T ++++ + ++ +++ + P+
Sbjct: 240 RNQELDRAFQMKVEMIGKSVL-PDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDE 298
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+ LI AY K+ +K + + M + F + TYN +I + +K +
Sbjct: 299 FTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLK 358
Query: 382 MHAEGMKADTKTF------CC---------LINGYANAGLFHKVISSVRLASKLQIAENV 426
+ + T+ CC L+ G+ GL + N
Sbjct: 359 LFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNE 418
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+ YN +I + ++++ ++YK M P + T + +A EGM+ ++
Sbjct: 419 AIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGEL 472
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 20/214 (9%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKV---------------FNEM 170
+AL + + + ++ F P TY L+ L K + + AR++ +N +
Sbjct: 316 KALHLHDEMIQKGFL-PDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTL 374
Query: 171 VEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMR 230
+E + AL+ +C L+DEA M N +P+ Y+ +I
Sbjct: 375 IENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMIN-KNHKPNEAIYNVIIHGHCRIGN 433
Query: 231 FELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK-PDVWTM 289
LY++M P+TVT ++ GM ++ V+ +L S CK D
Sbjct: 434 VLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRS--CKLTDAELS 491
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
++ + +G +DM+ + G+ P T T
Sbjct: 492 KVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGT 525
>gi|449440748|ref|XP_004138146.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Cucumis sativus]
Length = 874
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 163/389 (41%), Gaps = 49/389 (12%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
N + + DH + AL F LK P ++ TY ++ LLG++ Q K+ +
Sbjct: 350 NQILKRVDDHAV------ALGFFYWLKRLPRFRHDGHTYTTMIGLLGRAKQFAAINKLLD 403
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
+M+++G +P Y ++ +Y R + + +A QM+ C+PD TY TLI +
Sbjct: 404 QMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQE-AGCEPDRVTYCTLIDIHAKS 462
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
++ +Y+ M + +TP+T T ++++ GKAG + R+ M++ C P++ T
Sbjct: 463 GFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLFCRMVDEG-CVPNLVT 521
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
N ++++ A ++ + Y + G +P+ T+ I
Sbjct: 522 YNIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCI---------------------- 559
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
V+E G + E F +M + D + L++ + +G
Sbjct: 560 -------------VMEVLGHCGFLEEAEGIFIEMQKKNWVPDEPVYGLLVDLWGKSGNVQ 606
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
K K + NV N+++SA ++ L + ++ + M +P +T++++
Sbjct: 607 KAWEWYHAMLKAGLKPNVPTCNSLLSAFLRVHQLSDAYQLLQSMLTFGLKPSLQTYTLLL 666
Query: 469 EAYAKEGMNDKVYALEQEKLQMLLEASGH 497
ND + E L++ +GH
Sbjct: 667 SCCTDAQTNDMGFCCE------LMQVTGH 689
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 2/192 (1%)
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
C D + N IL + W ++ F D T+ +IG G+ + + ++
Sbjct: 342 CSIDAYQANQILKRVDDHAVALGFFYWLKRLPRFRHD--GHTYTTMIGLLGRAKQFAAIN 399
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+++ M K TYN +I ++ + F+QM G + D T+C LI+ +
Sbjct: 400 KLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQEAGCEPDRVTYCTLIDIH 459
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
A +G + + + Y+ +I+ KA L R++ RM ++ C P+
Sbjct: 460 AKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLFCRMVDEGCVPNL 519
Query: 462 ETFSIMTEAYAK 473
T++IM AK
Sbjct: 520 VTYNIMIALQAK 531
>gi|357138821|ref|XP_003570985.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Brachypodium distachyon]
Length = 613
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 143/308 (46%), Gaps = 10/308 (3%)
Query: 110 TVAETFSDHVLKKQW-FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
TV + D +LK + +A++V++ +K++ E TY ++ + GKS QP A K+FN
Sbjct: 258 TVYNAYLDGLLKARCTVKAVEVYQRMKKERCRTNTE-TYTLMINVYGKSKQPMSAMKIFN 316
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
EM G + YTAL+ A+ R L ++A QM+ + +PDVY Y+ L++A A
Sbjct: 317 EMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQAGH-EPDVYAYNALMEAYSRA 375
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
+ ++ M P+ + NI++ YG+AG+ + E + + P + +
Sbjct: 376 GFPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEATFESLKQQGM-APTMKS 434
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
+LS A G V E+ + G+ P+T N ++ AY + D M ++ M
Sbjct: 435 HMLLLSAHARSGNVGRCEQVMAQLHKSGLRPDTFALNAMLHAYARAGRLDDMERLLAAM- 493
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE-----GMKADTKTFCCLINGYAN 403
L ++N + A++ G ME FE + G+ AD ++ + GYA
Sbjct: 494 DLAGSADVGSHNVAVNAYARAGYLGRMEAAFEGIRRRKGKKGGIDADVVSWTSRMGGYAR 553
Query: 404 AGLFHKVI 411
+ K +
Sbjct: 554 KKEYGKCL 561
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 96/441 (21%), Positives = 187/441 (42%), Gaps = 15/441 (3%)
Query: 45 SVTSTNKHTSFSSESAVAAKKRLWK------EGEYPGVSETS--IPGYRSKRTPIKNLKK 96
V T S + A + R WK +G +P +S + I + K T + + +
Sbjct: 80 GVARTFDRKKISRKRGGAMRGRGWKYGSGFVDGVFPVLSPMAQDILEFVQKGTDVAKIWE 139
Query: 97 KLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGK 156
L+ + + L +QW + V E + + ++P Y L+ G+
Sbjct: 140 SLDNIPPTHNLWDDILNVAVQLRLNRQWDPIISVCEWIVYRSSFRPDIICYNLLIDAYGR 199
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK--TLPNCQPD 214
Q A ++ ++E PT + Y LL AYC + A +++M+ +P P
Sbjct: 200 KRQLNKAESIYAAVLEAQCVPTEDTYALLLRAYCNARSLHRAEGVISEMQEHGIP---PS 256
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
Y+ + + A +YQ M + NT T +++ YGK+ ++ +
Sbjct: 257 ATVYNAYLDGLLKARCTVKAVEVYQRMKKERCRTNTETYTLMINVYGKSKQPMSAMKIFN 316
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
M +S CK ++ T +++ FA +G + E +E+ + G +P+ +N L+ AY +
Sbjct: 317 EM-QSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQAGHEPDVYAYNALMEAYSRA 375
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
S + M+ + ++YN +++A+ G + E TFE + +GM K+
Sbjct: 376 GFPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEATFESLKQQGMAPTMKSH 435
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
L++ +A +G + + K + + NA++ A +A L +MER+ M +
Sbjct: 436 MLLLSAHARSGNVGRCEQVMAQLHKSGLRPDTFALNAMLHAYARAGRLDDMERLLAAM-D 494
Query: 455 KHCRPDSETFSIMTEAYAKEG 475
D + ++ AYA+ G
Sbjct: 495 LAGSADVGSHNVAVNAYARAG 515
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 139/320 (43%), Gaps = 7/320 (2%)
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
P Y L+ AY R +++A ++ C P TY+ L++A +A E
Sbjct: 185 PDIICYNLLIDAYGRKRQLNKA-ESIYAAVLEAQCVPTEDTYALLLRAYCNARSLHRAEG 243
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
+ +M E + P+ N L G KA + V M + C+ + T +++V+
Sbjct: 244 VISEMQEHGIPPSATVYNAYLDGLLKARCTVKAVEVYQRM-KKERCRTNTETYTLMINVY 302
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
Q + + + ++ G T+ L+ A+ ++ + +K V E M++
Sbjct: 303 GKSKQPMSAMKIFNEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQAGHEPDV 362
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
YN ++EA+S G + F M G + D ++ L++ Y AGL + ++
Sbjct: 363 YAYNALMEAYSRAGFPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEATFES 422
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ +A + + ++SA ++ ++ E+V ++ + RPD+ + M AYA+ G
Sbjct: 423 LKQQGMAPTMKSHMLLLSAHARSGNVGRCEQVMAQLHKSGLRPDTFALNAMLHAYARAGR 482
Query: 477 NDKVYALEQEKLQMLLEASG 496
D + E+L ++ +G
Sbjct: 483 LD-----DMERLLAAMDLAG 497
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 148/373 (39%), Gaps = 36/373 (9%)
Query: 138 PFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDE 197
P P TY L+ ++ +P+L VF ++ G+ P Y AL+ + + +D+
Sbjct: 183 PEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDK 242
Query: 198 AFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVL 257
A +M+ P+V TYS+LI + E + + M V PN +T N ++
Sbjct: 243 AHDLFYKMEE-QGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLI 301
Query: 258 GGYGKAGMFDQMERVLSGMLES--------------ATC--------------------K 283
GY +GM+ + RV M S A C K
Sbjct: 302 HGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPK 361
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
PDV + +L +A G + M+ + G+ P+ FN LI AY + M DK +
Sbjct: 362 PDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLM 421
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
E M K T++ VI AF +G F M G+ DT + CLI G N
Sbjct: 422 FEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCN 481
Query: 404 AGLFHKVISSVR-LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
K + + SK + F+ ++I+ K + E + V + RP+
Sbjct: 482 RRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLI 541
Query: 463 TFSIMTEAYAKEG 475
TF+ + + Y G
Sbjct: 542 TFNSLVDGYCLVG 554
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 150/365 (41%), Gaps = 4/365 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A +F ++EQ P TY L+ L K+ + + A +V +MV G+ P Y L
Sbjct: 242 KAHDLFYKMEEQGI-MPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCL 300
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ Y + + E+ +M + PDV ++ + A R + ++ M +
Sbjct: 301 IHGYSTSGMWKESVRVFKEMSS-SLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKG 359
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ ++ +L GY AG M+ + + M+ PD NT+++ +A G +D
Sbjct: 360 PKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVV-PDRHVFNTLINAYARLGMMDKS 418
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+E G++P+ TF+ +I A+ + D +M P ++ Y+ +I+
Sbjct: 419 LLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQG 478
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKAD-TKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
+ D + M ++G+ K F +IN G + V L
Sbjct: 479 QCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRP 538
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
N+ +N+++ ++ E + M+ PD T++ + + Y K G D L
Sbjct: 539 NLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLF 598
Query: 485 QEKLQ 489
++ L
Sbjct: 599 RDMLH 603
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 95/182 (52%), Gaps = 5/182 (2%)
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
+A+++F+EM+E G+ + Y +L CRN+ DEA + L ++ ++ N + D+ T++ +
Sbjct: 628 VAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSM-NVKFDILTFNIV 686
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
I+A R + + L+ + + P +T +++ K F+ + + S M E ++
Sbjct: 687 IRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSM-EKSS 745
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY---GKKRMYD 338
C PD +N I+ + NKG+V + K GI PE T ++LI + GK R Y
Sbjct: 746 CTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYI 805
Query: 339 KM 340
K+
Sbjct: 806 KL 807
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/386 (19%), Positives = 148/386 (38%), Gaps = 38/386 (9%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ SG + + +VF EM + P + + A C++ I EA
Sbjct: 291 RPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARD 350
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ M L +PDV +Y L+ A ++ L+ M V P+ N ++ Y
Sbjct: 351 IFDSM-VLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAY 409
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ GM D+ + M + PD+ T +T++S F G++D + + G+ P+
Sbjct: 410 ARLGMMDKSLLMFEDMTKQGV-NPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPD 468
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP------WTSS----------------- 357
T ++ LI +R K ++ M P +TS
Sbjct: 469 TAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVV 528
Query: 358 -------------TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
T+N++++ + +G+ K + M + G++ D T+ L++GY
Sbjct: 529 DLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKH 588
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
G ++ R ++ YN ++ +A + + ++ M E T+
Sbjct: 589 GRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTY 648
Query: 465 SIMTEAYAKEGMNDKVYALEQEKLQM 490
+ + + D+ L ++ M
Sbjct: 649 ATVLGGLCRNNCTDEANMLLEKLFSM 674
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 118/292 (40%), Gaps = 35/292 (11%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L K G+ + V + ++ G P + +L+ YC + EA L+ M+++ +P
Sbjct: 515 LCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESV-GVEP 573
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------MF 266
D+YTY+TL+ R + TL++DM + VT +V+ NI+L G +A MF
Sbjct: 574 DIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMF 633
Query: 267 DQM------------ERVLSGM---------------LESATCKPDVWTMNTILSVFANK 299
+M VL G+ L S K D+ T N ++
Sbjct: 634 HEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKV 693
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G+ + + +G+ P T+ ++I K+ ++ ++ M K S
Sbjct: 694 GRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRIL 753
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
N +I + G+ ++ +G+ + T LI ++ G + + I
Sbjct: 754 NEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYI 805
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 55/122 (45%)
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
T TYN +I + F ++ G+ D ++ LI+G++ G K
Sbjct: 188 TIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLF 247
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
+ I NV Y+++I+ K ++ + ERV ++M RP++ T++ + Y+
Sbjct: 248 YKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTS 307
Query: 475 GM 476
GM
Sbjct: 308 GM 309
>gi|357123699|ref|XP_003563545.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 492
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 148/340 (43%), Gaps = 2/340 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P Y LL L LA ++ +M ++G+ Y LL AY R +++++
Sbjct: 120 RPDAAHYNALLEGLLARAHLCLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWW 179
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +MK Q D YSTL++ D ++ L +M E V + N ++ +
Sbjct: 180 VLGEMKR-RGIQLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTF 238
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
GK G R+ M + KPD+ T N ++ G + R++ + G+ P+
Sbjct: 239 GKYGQLADARRLFEKM-RAEGIKPDIATWNALIRWHCRVGNMKRALRFFAAMQEEGMYPD 297
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+ F +I G++ +D++ + + MR + + Y +++ + G +
Sbjct: 298 PKIFMSIISRLGEQGKWDELKKLFDKMRNRGLKESGAVYAVLVDIYGQYGRFRDAHECVA 357
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+ AE + FC L N YA GL + ++ ++L I N+ N +I+A A
Sbjct: 358 ALKAEELHLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFSTAG 417
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+E V++ +K+ PD T++ + + + + +KV
Sbjct: 418 RHLEAVAVFQHIKDSGMSPDVVTYTTLMKGFMRVKKFEKV 457
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 146/340 (42%), Gaps = 11/340 (3%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TYM LL ++G+ E + V EM GI+ Y+ L+ Y N + +A + +M
Sbjct: 160 TYMLLLDAYARAGRLEDSWWVLGEMKRRGIQLDTAGYSTLVRLYRDNGMWKKATDLIMEM 219
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ L + DV Y+ LI + L++ M + P+ T N ++ + + G
Sbjct: 220 QEL-GVELDVKIYNGLIDTFGKYGQLADARRLFEKMRAEGIKPDIATWNALIRWHCRVGN 278
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+ R + M E PD +I+S +G+ D +++ ++K RN G+ +
Sbjct: 279 MKRALRFFAAMQEEGM-YPDPKIFMSIISRLGEQGKWDELKKLFDKMRNRGLKESGAVYA 337
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
+L+ YG+ + + ++ + + S + + A++ G + + M AE
Sbjct: 338 VLVDIYGQYGRFRDAHECVAALKAEELHLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAE 397
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G++ + LIN ++ AG + ++ + ++ +V Y ++ ++ ++
Sbjct: 398 GIEPNLVMLNLLINAFSTAGRHLEAVAVFQHIKDSGMSPDVVTYTTLMKGFMRVKKFEKV 457
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
VY M+ C PD + A+E ++D LEQ
Sbjct: 458 SEVYNEMERAGCTPDRK---------AREMLHDASVTLEQ 488
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 110/287 (38%), Gaps = 40/287 (13%)
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
+P Y+ LI+A A R E L +M + P+ N +L G +R
Sbjct: 85 RPSAAAYARLIRALARAGRTLEAEALLLEMRHLGLRPDAAHYNALLEGLLARAHLCLADR 144
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY--EKFRNFGIDPETRTFNILIG 329
+L M + + + T +L +A G+++ + W+ + + GI +T ++ L+
Sbjct: 145 LLLQMADDGVAR-NRRTYMLLLDAYARAGRLE--DSWWVLGEMKRRGIQLDTAGYSTLVR 201
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
Y M+ K + ++ M++L YN +I+ F G FE+M AEG+K
Sbjct: 202 LYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARRLFEKMRAEGIKP 261
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
D T+ LI + G + + R +
Sbjct: 262 DIATWNALIRWHCRVGNMKRAL-----------------------------------RFF 286
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
M+E+ PD + F + ++G D++ L + L+ SG
Sbjct: 287 AAMQEEGMYPDPKIFMSIISRLGEQGKWDELKKLFDKMRNRGLKESG 333
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 149/343 (43%), Gaps = 15/343 (4%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L ++G+ E + MV G P T+L+ +C+ +A + ++ P
Sbjct: 94 LVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIED-SGAVP 152
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
DV TY+ LI R+ E L DM R +P+ VT NI++ + G+ + VL
Sbjct: 153 DVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVL 212
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
M + C P+ + N +L F + +++ + K + G P+ T+N L+ A K
Sbjct: 213 EKMPKHG-CTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCK 271
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSS---TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
K+ + +E + +L S TYN VI+ S +G ++M A+G+K D
Sbjct: 272 D---GKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPD 328
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
T+ L+ G + G + I L + N YNA++ KA
Sbjct: 329 IITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLA 388
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
M ++ C+P +++I+ E A EG L +E L++L E
Sbjct: 389 YMVQRGCKPTEASYTILIEGLAYEG-------LAKEALELLNE 424
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 124/297 (41%), Gaps = 38/297 (12%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A ++ E++ E P TY L+ + +G+ A K+ +MV G P+ + L
Sbjct: 137 KATRIMEII-EDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNIL 195
Query: 186 LAAYCRNSLIDEAFVTLNQM---KTLPN-------------------------------C 211
+ CR L+ A L +M PN C
Sbjct: 196 INFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGC 255
Query: 212 QPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
PD+ TY+TL+ A C D +E L Q + + +P +T N V+ G K G DQ
Sbjct: 256 YPDIVTYNTLLTALCKDGKVDAAVELLNQ-LSSKGCSPVLITYNTVIDGLSKVGKTDQAA 314
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
++L M + KPD+ T ++++ + +G+VD +++ G+ P T+N ++
Sbjct: 315 KLLDEM-RAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLG 373
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
K R D+ + YM + T ++Y +IE + G AK ++ G+
Sbjct: 374 LCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGV 430
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 152/359 (42%), Gaps = 40/359 (11%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H+ + + +AL++F M++ + P E +Y LL L K+ + +LAR + M G+
Sbjct: 343 HISEGNFKEALKMFYMMEAKGL-TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCV 401
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
YT ++ C+N +DEA V LN+M PD+ TYS LI RF+ + +
Sbjct: 402 GRITYTGMIDGLCKNGFLDEAVVLLNEMSK-DGIDPDIVTYSALINGFCKVGRFKTAKEI 460
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM-LESATCKPDVWTMNTILSVF 296
+ ++PN + + ++ + G + R+ M LE T D +T N +++
Sbjct: 461 VCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHT--RDHFTFNVLVTSL 518
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
G+V E + + GI P T +F+ LI YG K SV + M K+ T
Sbjct: 519 CKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTF 578
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
TY ++++ G + E + +HA DT
Sbjct: 579 FTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT------------------------- 613
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
YN +++A K+ +L + ++ M ++ PDS T++ + ++G
Sbjct: 614 ----------VMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG 662
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 144/345 (41%), Gaps = 6/345 (1%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
EMLK + P T+ L+ +L G E + + +M + G PT Y +L YC+
Sbjct: 183 EMLKRK--ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
A L+ MK+ DV TY+ LI + R L +DM +R + PN V
Sbjct: 241 KGRFKAAIELLDHMKS-KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
T N ++ G+ G ++L+ ML S P+ T N ++ ++G + +
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEML-SFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
G+ P ++ +L+ K +D M++ TY +I+ G
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNA 431
+M +G+ D T+ LING+ G F V ++ ++ N Y+
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478
Query: 432 VISACIKADDLMEMERVYKRM-KEKHCRPDSETFSIMTEAYAKEG 475
+I C + L E R+Y+ M E H R D TF+++ + K G
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTR-DHFTFNVLVTSLCKAG 522
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 141/356 (39%), Gaps = 16/356 (4%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
P E TY L+ G+ +A ++ NEM+ G+ P + AL+ + EA
Sbjct: 295 HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALK 354
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
M+ P +Y L+ F+L Y M V +T ++ G
Sbjct: 355 MFYMMEA-KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGL 413
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G D+ +L+ M + PD+ T + +++ F G+ + + G+ P
Sbjct: 414 CKNGFLDEAVVLLNEMSKDGI-DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPN 472
Query: 321 TRTFNILI------GAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
++ LI G + R+Y+ M ++E + F T+N ++ + G
Sbjct: 473 GIIYSTLIYNCCRMGCLKEAIRIYEAM--ILEGHTRDHF-----TFNVLVTSLCKAGKVA 525
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
E M ++G+ +T +F CLINGY N+G K S +K+ Y +++
Sbjct: 526 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 585
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
K L E E+ K + D+ ++ + A K G K +L E +Q
Sbjct: 586 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQ 641
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 159/405 (39%), Gaps = 18/405 (4%)
Query: 84 YRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPK 143
YR R + + K L K WV +DH+++ +L Y P
Sbjct: 40 YRQARLRLVHGKLAL----KFLKWVVKQPGLETDHIVQLVCITT----HILVRARMYDPA 91
Query: 144 EGTYMKLLVLLGKSGQPELARKVFNEMVE--EGIEPTPELYTALLAAYCRNSLIDEAFVT 201
+L ++ GKS VF ++ P +Y L+ Y R +I ++
Sbjct: 92 RHILKELSLMSGKSSF------VFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEI 145
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
M L P VYT + ++ + V + + + ++M +R + P+ T NI++
Sbjct: 146 FRLMG-LYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLC 204
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
G F++ ++ M E + P + T NT+L + KG+ + ++ G+D +
Sbjct: 205 AEGSFEKSSYLMQKM-EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADV 263
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+N+LI + K ++ MRK TYN +I FS+ G +
Sbjct: 264 CTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNE 323
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M + G+ + TF LI+G+ + G F + + + + + Y ++ K +
Sbjct: 324 MLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAE 383
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
Y RMK T++ M + K G D+ L E
Sbjct: 384 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 428
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 146/352 (41%), Gaps = 4/352 (1%)
Query: 136 EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI 195
E+ Y P TY +L K G+ + A ++ + M +G++ Y L+ CR++ I
Sbjct: 220 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 279
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI 255
+ ++ L M+ P+ TY+TLI + + + L +M ++PN VT N
Sbjct: 280 AKGYLLLRDMRK-RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNA 338
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
++ G+ G F + ++ M+E+ P + +L + D+ +Y + +
Sbjct: 339 LIDGHISEGNFKEALKMFY-MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRN 397
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G+ T+ +I K D+ ++ M K TY+ +I F +G K
Sbjct: 398 GVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTA 457
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSF-YNAVIS 434
+ +++ G+ + + LI G + I + A L+ F +N +++
Sbjct: 458 KEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI-RIYEAMILEGHTRDHFTFNVLVT 516
Query: 435 ACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ KA + E E + M P++ +F + Y G K +++ E
Sbjct: 517 SLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDE 568
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 135/346 (39%), Gaps = 1/346 (0%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y LL + KSG A +F EMV+ I P YT+L++ CR A + + +
Sbjct: 616 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 675
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
N P+ Y+ + A +++ + MD TP+ VT N ++ GY + G
Sbjct: 676 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
++ +L M + P++ T N +L ++ + V Y GI P+ T +
Sbjct: 736 EKTNDLLPEM-GNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHS 794
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
L+ + M + +++ T+N +I G+ + M + G
Sbjct: 795 LVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLG 854
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+ D T +++ F + + SK I+ Y +I+ + D+
Sbjct: 855 ISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAF 914
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLL 492
V + M P + S M A AK G D+ L + L+M L
Sbjct: 915 VVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKL 960
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 5/213 (2%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P V+T N IL G+ + + ++ I P+ TFNILI + ++K S +
Sbjct: 156 PSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYL 215
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
M+ M K + T TYN V+ + G K + M ++G+ AD T+ LI+
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
+ K +R K I N YN +I+ ++ ++ M P+ T
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335
Query: 464 FSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
F+ + + + EG N K E K+ ++EA G
Sbjct: 336 FNALIDGHISEG-NFK----EALKMFYMMEAKG 363
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 102/262 (38%), Gaps = 8/262 (3%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P + T L++ + +S E+ K+ + G+E + L++ C N I+ AF
Sbjct: 787 PDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL 846
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ M +L D T ++ RF+ + +M ++ ++P + ++ G
Sbjct: 847 VKVMTSL-GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC 905
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD---MMERWYEKFRNFGID 318
+ G V M+ C P+V + ++ A G+ D ++ R+ K + +
Sbjct: 906 RVGDIKTAFVVKEEMIAHKICPPNVAE-SAMVRALAKCGKADEATLLLRFMLKMK---LV 961
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P +F L+ K + + M +YN +I GD
Sbjct: 962 PTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFEL 1021
Query: 379 FEQMHAEGMKADTKTFCCLING 400
+E+M +G A+ T+ LI G
Sbjct: 1022 YEEMKGDGFLANATTYKALIRG 1043
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 152/359 (42%), Gaps = 40/359 (11%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H+ + + +AL++F M++ + P E +Y LL L K+ + +LAR + M G+
Sbjct: 343 HISEGNFKEALKMFYMMEAKGL-TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCV 401
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
YT ++ C+N +DEA V LN+M PD+ TYS LI RF+ + +
Sbjct: 402 GRITYTGMIDGLCKNGFLDEAVVLLNEMSK-DGIDPDIVTYSALINGFCKVGRFKTAKEI 460
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM-LESATCKPDVWTMNTILSVF 296
+ ++PN + + ++ + G + R+ M LE T D +T N +++
Sbjct: 461 VCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHT--RDHFTFNVLVTSL 518
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
G+V E + + GI P T +F+ LI YG K SV + M K+ T
Sbjct: 519 CKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTF 578
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
TY ++++ G + E + +HA DT
Sbjct: 579 FTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT------------------------- 613
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
YN +++A K+ +L + ++ M ++ PDS T++ + ++G
Sbjct: 614 ----------VMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG 662
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 144/345 (41%), Gaps = 6/345 (1%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
EMLK + P T+ L+ +L G E + + +M + G PT Y +L YC+
Sbjct: 183 EMLKRK--ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
A L+ MK+ DV TY+ LI + R L +DM +R + PN V
Sbjct: 241 KGRFKAAIELLDHMKS-KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
T N ++ G+ G ++L+ ML S P+ T N ++ ++G + +
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEML-SFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
G+ P ++ +L+ K +D M++ TY +I+ G
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNA 431
+M +G+ D T+ LING+ G F V ++ ++ N Y+
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478
Query: 432 VISACIKADDLMEMERVYKRM-KEKHCRPDSETFSIMTEAYAKEG 475
+I C + L E R+Y+ M E H R D TF+++ + K G
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTR-DHFTFNVLVTSLCKAG 522
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 141/356 (39%), Gaps = 16/356 (4%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
P E TY L+ G+ +A ++ NEM+ G+ P + AL+ + EA
Sbjct: 295 HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALK 354
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
M+ P +Y L+ F+L Y M V +T ++ G
Sbjct: 355 MFYMMEA-KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGL 413
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G D+ +L+ M + PD+ T + +++ F G+ + + G+ P
Sbjct: 414 CKNGFLDEAVVLLNEMSKDGI-DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPN 472
Query: 321 TRTFNILI------GAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
++ LI G + R+Y+ M ++E + F T+N ++ + G
Sbjct: 473 GIIYSTLIYNCCRMGCLKEAIRIYEAM--ILEGHTRDHF-----TFNVLVTSLCKAGKVA 525
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
E M ++G+ +T +F CLINGY N+G K S +K+ Y +++
Sbjct: 526 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 585
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
K L E E+ K + D+ ++ + A K G K +L E +Q
Sbjct: 586 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQ 641
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 159/405 (39%), Gaps = 18/405 (4%)
Query: 84 YRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPK 143
YR R + + K L K WV +DH+++ +L Y P
Sbjct: 40 YRQARLRLVHGKLAL----KFLKWVVKQPGLETDHIVQLVCITT----HILVRARMYDPA 91
Query: 144 EGTYMKLLVLLGKSGQPELARKVFNEMVE--EGIEPTPELYTALLAAYCRNSLIDEAFVT 201
+L ++ GKS VF ++ P +Y L+ Y R +I ++
Sbjct: 92 RHILKELSLMSGKSSF------VFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEI 145
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
M L P VYT + ++ + V + + + ++M +R + P+ T NI++
Sbjct: 146 FRLMG-LYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLC 204
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
G F++ ++ M E + P + T NT+L + KG+ + ++ G+D +
Sbjct: 205 AEGSFEKSSYLMQKM-EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADV 263
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+N+LI + K ++ MRK TYN +I FS+ G +
Sbjct: 264 CTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNE 323
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M + G+ + TF LI+G+ + G F + + + + + Y ++ K +
Sbjct: 324 MLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAE 383
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
Y RMK T++ M + K G D+ L E
Sbjct: 384 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 428
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 135/346 (39%), Gaps = 1/346 (0%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y LL + KSG A +F EMV+ I P YT+L++ CR A + + +
Sbjct: 616 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 675
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
N P+ Y+ + A +++ + MD TP+ VT N ++ GY + G
Sbjct: 676 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
++ +L M + P++ T N +L ++ + V Y GI P+ T +
Sbjct: 736 EKTNDLLPEM-GNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHS 794
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
L+ + M + +++ T+N +I G+ + M + G
Sbjct: 795 LVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLG 854
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+ D T +++ F + + SK I+ Y +I+ + D+
Sbjct: 855 ISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAF 914
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLL 492
V + M P + S M A AK G D+ L + L+M L
Sbjct: 915 VVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKL 960
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 5/213 (2%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P V+T N IL G+ + + ++ I P+ TFNILI + ++K S +
Sbjct: 156 PSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYL 215
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
M+ M K + T TYN V+ + G K + M ++G+ AD T+ LI+
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
+ K +R K I N YN +I+ ++ ++ M P+ T
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335
Query: 464 FSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
F+ + + + EG N K E K+ ++EA G
Sbjct: 336 FNALIDGHISEG-NFK----EALKMFYMMEAKG 363
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 102/262 (38%), Gaps = 8/262 (3%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P + T L++ + +S E+ K+ + G+E + L++ C N I+ AF
Sbjct: 787 PDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDL 846
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ M +L D T ++ RF+ + +M ++ ++P + ++ G
Sbjct: 847 VKVMTSL-GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC 905
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD---MMERWYEKFRNFGID 318
+ G V M+ C P+V + ++ A G+ D ++ R+ K + +
Sbjct: 906 RVGDIKTAFVVKEEMIAHKICPPNVAE-SAMVRALAKCGKADEATLLLRFMLKMK---LV 961
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P +F L+ K + + M +YN +I GD
Sbjct: 962 PTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFEL 1021
Query: 379 FEQMHAEGMKADTKTFCCLING 400
+E+M +G A+ T+ LI G
Sbjct: 1022 YEEMKGDGFLANATTYKALIRG 1043
>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
Length = 653
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 149/344 (43%), Gaps = 5/344 (1%)
Query: 132 EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR 191
E+L P P +Y +++ L + + + V +MV G++P YT ++ A+C+
Sbjct: 225 EVLSAAP---PVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCK 281
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
+ A L +M + C P+V T++ L+ + R +++ M P+TV
Sbjct: 282 AGELRMACAILARM-VITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTV 340
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
+ N+++ G G VL+ M E C P+ T +T++ F+ G +D +
Sbjct: 341 SYNVLIRGLCSVGDLKGASSVLNDM-EQHGCFPNARTYSTLIDGFSKAGDLDGAISIWND 399
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
G P + ++G + KK M+++ S+++ M P + T+N +I + +
Sbjct: 400 MTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRR 459
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNA 431
F +M G + +T+ L++G G + V I ++ YN
Sbjct: 460 VGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNT 519
Query: 432 VISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
V+S + E RM + +PD+ TF+ + AY KEG
Sbjct: 520 VVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEG 563
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 157/382 (41%), Gaps = 16/382 (4%)
Query: 117 DHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIE 176
D +L++ A+ + + QP TY L+ L ++ + ARK+ +EM +G
Sbjct: 142 DALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCP 201
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
P Y +++A C +DEA + L P +Y+ +I A R + +
Sbjct: 202 PDDVTYGTIVSALCTLGRVDEA------TEVLSAAPPVAASYNAVILALCREFRMQEVFA 255
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
+ DM R + PN +T ++ + KAG +L+ M+ + C P+V T ++
Sbjct: 256 VVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITG-CTPNVATFTALVGGL 314
Query: 297 ANKGQV-DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
N G+V D ++ W G P T ++N+LI SSV+ M +
Sbjct: 315 FNDGRVHDALDMWKCMVAE-GWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPN 373
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
+ TY+ +I+ FS GD + M G K + + ++ + +F++ S +
Sbjct: 374 ARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLID 433
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
N +N +I + + V+ M+ C P+ T++ + +EG
Sbjct: 434 KMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREG 493
Query: 476 MNDKVYALEQEKLQMLLEASGH 497
+ LQM++E H
Sbjct: 494 NCG-------DALQMVIEMQNH 508
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 130/343 (37%), Gaps = 45/343 (13%)
Query: 144 EGTYMKLLVLLGKSGQPELARKVFNEMVEE--GIEPT-PELYTALLAAYCRNSLIDEAFV 200
EG + + ++G P+ A K F V + PT P LY L+ A R +++ +
Sbjct: 96 EGALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPTAPRLYNHLIDALLRENMVGAVAL 155
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
M+ QP+V+TY+ L++A + QN +G
Sbjct: 156 VCGNMRK-DGVQPNVFTYNLLVRA--------------------------LCQNHRVGAA 188
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K M D+M + C PD T TI+S G+VD P
Sbjct: 189 RK--MLDEMA--------TKGCPPDDVTYGTIVSALCTLGRVDEATEVLSA-----APPV 233
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
++N +I A ++ ++ +V+ M TY ++ AF G+ +
Sbjct: 234 AASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILA 293
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M G + TF L+ G N G H + + A + YN +I
Sbjct: 294 RMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVG 353
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
DL V M++ C P++ T+S + + ++K G D ++
Sbjct: 354 DLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISI 396
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 99/263 (37%), Gaps = 72/263 (27%)
Query: 136 EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI 195
EQ P TY L+ K+G + A ++N+M G +P +YT ++ +C+ +
Sbjct: 366 EQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMF 425
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI 255
++A +++M + NC P+ T++TLI++ + R ++ +M PN T N
Sbjct: 426 NQAESLIDKM-LVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNE 484
Query: 256 VLGGYGKAG-------MFDQMER------------VLSGMLE---------------SAT 281
+L G + G M +M+ V+SG+ +
Sbjct: 485 LLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRG 544
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF-------------------------- 315
+PD +T I+ + +G+V M W N
Sbjct: 545 IQPDAFTFTAIIHAYCKEGEVRMAA-WILGAMNVVNCGRNILVYTILMAELCNQDKLEDA 603
Query: 316 ----------GIDPETRTFNILI 328
GI P T T+N+L+
Sbjct: 604 MVYLLKMLYEGIYPNTVTWNVLV 626
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
M+ GI+P +TA++ AYC+ + A L M + NC ++ Y+ L+ +
Sbjct: 538 GRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVV-NCGRNILVYTILMAELCN 596
Query: 228 AMRFE-----LIETLYQDMDERSVTPNTVTQNIVLGG 259
+ E L++ LY+ + PNTVT N+++ G
Sbjct: 597 QDKLEDAMVYLLKMLYE-----GIYPNTVTWNVLVRG 628
>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 140/335 (41%), Gaps = 3/335 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L K G+ E+A +E ++G+ P Y L+ AYC++ D A
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L QM C+PD+ TY LI V + + + + +R V+P+ N+++ G
Sbjct: 402 LLLQMAE-RGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGL 460
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G F + + S ML+ PD + T++ F G D + + G+ +
Sbjct: 461 CKTGRFLPAKLLFSEMLDRNIL-PDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVD 519
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
N +I + + M D+ + M M + TY+ +I+ + D F
Sbjct: 520 VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR 579
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
M K + T+ LING+ G F + + + NV Y +I + K
Sbjct: 580 YMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKES 639
Query: 441 DLMEMERVY-KRMKEKHCRPDSETFSIMTEAYAKE 474
+E Y + M C P+ TF+ + + + K+
Sbjct: 640 STLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKK 674
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/373 (19%), Positives = 148/373 (39%), Gaps = 46/373 (12%)
Query: 139 FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR------- 191
FY G Y KL G E A VF E+ +G PT E + ++ +C+
Sbjct: 242 FYNTIIGGYCKL-------GDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVAS 294
Query: 192 -------------------NSLIDEAFVTLNQMKTLP----------NCQPDVYTYSTLI 222
N++ID + + K P +C+PDV TY+ LI
Sbjct: 295 DRLLSEVKERGLRVSVWFLNNIIDAKY--RHGYKVDPAESIGWIIANDCKPDVATYNILI 352
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
+ E+ + ++ + PN ++ ++ Y K+ +D ++L M E C
Sbjct: 353 NRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERG-C 411
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
KPD+ T ++ G +D K + G+ P+ +N+L+ K +
Sbjct: 412 KPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKL 471
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+ M + Y +I+ F GD F +G+K D +I G+
Sbjct: 472 LFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFC 531
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
+G+ + ++ + ++ + + Y+ +I +K D+ ++++ M++ C+P+
Sbjct: 532 RSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVV 591
Query: 463 TFSIMTEAYAKEG 475
T++ + + +G
Sbjct: 592 TYTSLINGFCCQG 604
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 142/353 (40%), Gaps = 39/353 (11%)
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
G+ E+ RK+ +G P Y ++ YC+ I+ A++ ++K L P + T
Sbjct: 219 GKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELK-LKGFMPTLET 277
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNT-VTQNIVLGGYGKAGMFDQMERVLSGM 276
+ T+I F + L ++ ER + + NI+ Y D E + G
Sbjct: 278 FGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESI--GW 335
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
+ + CKPDV T N +++ +G+ ++ + ++ G+ P ++ LI AY K +
Sbjct: 336 IIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKE 395
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAF---SDMGDAKHM------------------ 375
YD S ++ M + TY +I M DA +M
Sbjct: 396 YDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNM 455
Query: 376 --------------EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+ F +M + D + LI+G+ +G F + L+ +
Sbjct: 456 LMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKG 515
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
+ +V +NA+I ++ L E RM E+H PD T+S + + Y K+
Sbjct: 516 VKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQ 568
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 140/328 (42%), Gaps = 10/328 (3%)
Query: 162 LAR-KVFNEMVE-------EGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
LAR ++FNE+ + E ++ T E + +L AY + + +A + + L + P
Sbjct: 109 LARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVP 168
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
DV ++L+ V + R +Y +M +R + + + I++ G G + +++
Sbjct: 169 DVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLI 228
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
G C P++ NTI+ + G ++ +++ + G P TF +I + K
Sbjct: 229 EGRWGKG-CIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+ + ++ +++ + NN+I+A G + + A K D T
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+ LIN G + + ASK + N Y +I A K+ + ++ +M
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407
Query: 454 EKHCRPDSETFSIMTEAYAKEG-MNDKV 480
E+ C+PD T+ I+ G M+D V
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMDDAV 435
>gi|449477323|ref|XP_004154991.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g18900-like [Cucumis sativus]
Length = 874
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 163/389 (41%), Gaps = 49/389 (12%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
N + + DH + AL F LK P ++ TY ++ LLG++ Q K+ +
Sbjct: 350 NQILKRVDDHAV------ALGFFYWLKRLPRFRHDGHTYTTMIGLLGRAKQFAAINKLLD 403
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
+M+++G +P Y ++ +Y R + + +A QM+ C+PD TY TLI +
Sbjct: 404 QMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQE-AGCEPDRVTYCTLIDIHAKS 462
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
++ +Y+ M + +TP+T T ++++ GKAG + R+ M++ C P++ T
Sbjct: 463 GFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLFCRMVDEG-CVPNLVT 521
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
N ++++ A ++ + Y + G +P+ T+ I
Sbjct: 522 YNIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCI---------------------- 559
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
V+E G + E F +M + D + L++ + +G
Sbjct: 560 -------------VMEVLGHCGFLEEAEGIFIEMQKKNWVPDEPVYGLLVDLWGKSGNVQ 606
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
K K + NV N+++SA ++ L + ++ + M +P +T++++
Sbjct: 607 KAWEWYHAMLKAGLKPNVPTCNSLLSAFLRVHQLSDAYQLLQSMLTFGLKPSLQTYTLLL 666
Query: 469 EAYAKEGMNDKVYALEQEKLQMLLEASGH 497
ND + E L++ +GH
Sbjct: 667 SCCTDAQTNDMGFCCE------LMQVTGH 689
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 2/192 (1%)
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
C D + N IL + W ++ F D T+ +IG G+ + + ++
Sbjct: 342 CSIDAYQANQILKRVDDHAVALGFFYWLKRLPRFRHD--GHTYTTMIGLLGRAKQFAAIN 399
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+++ M K TYN +I ++ + F+QM G + D T+C LI+ +
Sbjct: 400 KLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQEAGCEPDRVTYCTLIDIH 459
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
A +G + + + Y+ +I+ KA L R++ RM ++ C P+
Sbjct: 460 AKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLFCRMVDEGCVPNL 519
Query: 462 ETFSIMTEAYAK 473
T++IM AK
Sbjct: 520 VTYNIMIALQAK 531
>gi|356515931|ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 461
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 129/269 (47%), Gaps = 5/269 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A ++F+ +K Q + P E +Y LL GK+ AR+VF EMVE G +P Y +
Sbjct: 165 KAQEIFDAMKGQ--FVPDEKSYSILLEGWGKAPNLPRAREVFREMVEAGCDPDVVTYGIM 222
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ +DEA + +M + NC+P + YS L+ R E + +M ++
Sbjct: 223 VDVLCKAGRVDEAVEVVKEM-DVGNCRPTSFIYSVLVHTYGVEHRIEDAIDTFLEMAKKG 281
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ + V N ++G + K F + RVL M ES P+ T N I+S +GQ D
Sbjct: 282 IKADVVAYNALIGAFCKVNKFKNVHRVLKEM-ESNGVAPNSRTCNVIISSMIGQGQTDRA 340
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
R + + +P+ T+ ++I + +K + + +YM+ QF + T++ +I+
Sbjct: 341 FRVFCRMIKL-CEPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQFVPSMHTFSALIKG 399
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
+ +A E+M +G++ TF
Sbjct: 400 LCEKDNAAKACVVMEEMIEKGIRPSRITF 428
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 182/421 (43%), Gaps = 44/421 (10%)
Query: 111 VAETFSDHVLKK---QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
V+ ++VLK+ A + FE ++Q Y Y ++ L K Q ++ +
Sbjct: 42 VSPDLVENVLKRFENAGMPAFRFFEWAEKQRGYSHSIRAYHLMIESLAKIRQYQIVWDLV 101
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
+ M ++G+ E + ++ Y R + +DEA T N M + P++ ++ L+ A
Sbjct: 102 SAMRKKGM-LNVETFCIMMRKYARANKVDEAVYTFNVMDKY-DVVPNLAAFNGLLSALCK 159
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
+ + ++ M + V P+ + +I+L G+GKA + V M+E A C PDV
Sbjct: 160 SNNVRKAQEIFDAMKGQFV-PDEKSYSILLEGWGKAPNLPRAREVFREMVE-AGCDPDVV 217
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG-KKRMYDKMSSVMEY 346
T ++ V G+VD ++ P + +++L+ YG + R+ D + + +E
Sbjct: 218 TYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHRIEDAIDTFLE- 276
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG- 405
M K YN +I AF + K++ ++M + G+ +++T +I+ G
Sbjct: 277 MAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNVIISSMIGQGQ 336
Query: 406 ------LFHKVI--------------------SSVRLASKL-------QIAENVSFYNAV 432
+F ++I + + +A K+ Q ++ ++A+
Sbjct: 337 TDRAFRVFCRMIKLCEPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQFVPSMHTFSAL 396
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLL 492
I + D+ + V + M EK RP TF + + KEG D V EK+ +L+
Sbjct: 397 IKGLCEKDNAAKACVVMEEMIEKGIRPSRITFGRLRQLLIKEGRED-VLKFLHEKMNLLV 455
Query: 493 E 493
+
Sbjct: 456 K 456
>gi|125580966|gb|EAZ21897.1| hypothetical protein OsJ_05550 [Oryza sativa Japonica Group]
Length = 595
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 157/353 (44%), Gaps = 4/353 (1%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
K+Q +A ++ L E P E TY LL +G A V +EM E GI P
Sbjct: 188 KRQLNKAESIYMALLEAQCV-PTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNAT 246
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
+Y A L + ++A +MK C+ + T++ +I A + ++ +
Sbjct: 247 VYNAYLDGLLKARCTEKAVEVYQRMKR-ERCRANTETFTLMINVYGKAKQPMSSMKVFNE 305
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M PN T ++ + + G+ ++ E V M + A +PDV+ N ++ ++ G
Sbjct: 306 MKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEM-QQAGHEPDVYAYNALMEAYSRAG 364
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+ ++ G +P+ ++NIL+ AYG+ +++ +V E +++ T ++
Sbjct: 365 LPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHM 424
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
++ A + G+A E Q+H G+ DT ++N YA AG + + A +
Sbjct: 425 LLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDD-MERLFAAMER 483
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ +V YN ++A +A + ME + + + D T++ AYA+
Sbjct: 484 RGDADVGTYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAYAR 536
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/460 (19%), Positives = 175/460 (38%), Gaps = 50/460 (10%)
Query: 45 SVTSTNKHTSFSSESAVAAKKRLWK------EGEYPGVSETS--IPGYRSKRTPIKNLKK 96
V+ T S + A + R WK +G +P +S + I + K T + + +
Sbjct: 68 GVSRTFDRKKISRKRGGAMRGRGWKYGSGFVDGVFPVLSPMAQDILEFVQKGTDVAKIWE 127
Query: 97 KLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGK 156
L+ + + + K+W + V E + + ++P Y L+ GK
Sbjct: 128 SLDNIPSTHNLFDDLVNVAVQFRMNKKWDLIIPVCEWILYRSSFRPDIICYNLLIESYGK 187
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
Q + +Y ALL A C P
Sbjct: 188 KRQ---------------LNKAESIYMALLEA---------------------QCVPTED 211
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
TY+ L++A +A E + +M E + PN N L G KA ++ V M
Sbjct: 212 TYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRM 271
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
+ C+ + T +++V+ Q + + + ++ G P T+ L+ A+ ++ +
Sbjct: 272 -KRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGL 330
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
+K V E M++ YN ++EA+S G + F M G + D ++
Sbjct: 331 CEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNI 390
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
L++ Y AGL + + ++ + + +++A ++ + E V ++ +
Sbjct: 391 LVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSG 450
Query: 457 CRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
PD+ + M AYA+ G D + E+L +E G
Sbjct: 451 LTPDTFALNAMLNAYARAGRLD-----DMERLFAAMERRG 485
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 96/229 (41%), Gaps = 40/229 (17%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
N + E +S L + A ++F +++ +P +Y L+ G++G E A VF
Sbjct: 354 NALMEAYSRAGLPQG---ASEIFSLMQHMGC-EPDRASYNILVDAYGRAGLHEDAEAVFE 409
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
E+ + G+ PT + + LLAA+ R+ + Q+ PD + + ++ A A
Sbjct: 410 ELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHK-SGLTPDTFALNAMLNAYARA 468
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS-------------- 274
R + +E L+ M+ R + T N+ + YG+AG +ME +
Sbjct: 469 GRLDDMERLFAAMERRG-DADVGTYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADVVTW 527
Query: 275 -----------------GMLE---SATCKPDVWTMNTILSVFANKGQVD 303
GM+E A C PD T +L+ +++ QV+
Sbjct: 528 TARMGAYARRKEYGRCVGMVEEMVDAGCYPDAGTARVLLAACSDERQVE 576
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 145/334 (43%), Gaps = 2/334 (0%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+ P + L LL + + E A ++F+ M +G +P YT ++ A C DEA
Sbjct: 115 FVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAA 174
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
++ PD L+ R +L L + + V N++ N ++ G
Sbjct: 175 KVWRRLID-KGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDG 233
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ + G D+ ++ + M + C PD+ T N +L+ +G VD R E G++P
Sbjct: 234 FCRMGRVDKAMKIKAFMSRTG-CVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEP 292
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ ++N L+ + K M D+ +M + + +YN VI AF + F
Sbjct: 293 DLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELF 352
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
E+M +G++ D TF LI+ + G H V + +K+++ + FY AV+ K
Sbjct: 353 EEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKN 412
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ V++ M E PD +++ + + K
Sbjct: 413 GKVDVAHSVFRDMVENGVNPDVISYNALLNGFCK 446
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 154/374 (41%), Gaps = 17/374 (4%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNE-MVEEGIEPTPELYTA 184
QA+ +F+ + E + Y + + +L + + LA + ++ G P Y+
Sbjct: 28 QAIYLFDQMTESNC-RVFSVDYNRFIGVLLRHSRLHLAHHYYRRHVIPRGFSLLPFTYSR 86
Query: 185 LLAAYCRNS------LIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
++A C LI + ++ + +P D++ ++T + R E L+
Sbjct: 87 FISALCSAPNNINLPLIHSLLLDMDSLGFVP----DIWAFNTYLNLLCRQNRLETALELF 142
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
M + P+ V+ I++ A FD+ +V +++ PD ++ +
Sbjct: 143 HSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGL-SPDYKACVALVVGLCS 201
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
G+VD+ G+ + +N LI + + DK + +M + T
Sbjct: 202 GGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVT 261
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN ++ + G E M G++ D ++ L+ G+ A + + + + +
Sbjct: 262 YNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDR--AHLMMVE 319
Query: 419 KLQIAE--NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
++Q +V YN VI+A KA + +++ M K RPD TF+I+ +A+ +EG
Sbjct: 320 RMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGS 379
Query: 477 NDKVYALEQEKLQM 490
V L E +M
Sbjct: 380 THVVKKLLDEMTKM 393
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 148/353 (41%), Gaps = 40/353 (11%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K++ +A +V+ L ++ P + L+V L G+ +LA ++ +++ G++ +
Sbjct: 168 KRFDEAAKVWRRLIDKGL-SPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLV 226
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y AL+ +CR +D+A + + + C PD+ TY+ L+ C + + L + M
Sbjct: 227 YNALIDGFCRMGRVDKA-MKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETM 285
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES-ATCKPDVWTMNTILSVFANKG 300
+ V P+ + N +L G+ KA M D+ ++ +++ C DV + NT+++ F
Sbjct: 286 ERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMC--DVVSYNTVITAFCKAR 343
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+ +E+ GI P+ TFNILI
Sbjct: 344 RTRKGYELFEEMCGKGIRPDMVTFNILI-------------------------------- 371
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+AF G ++ ++M + D + +++ G S R +
Sbjct: 372 ---DAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVEN 428
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ +V YNA+++ K +M+ ++ M+ K PD T+ ++ +
Sbjct: 429 GVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIR 481
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/318 (19%), Positives = 132/318 (41%), Gaps = 18/318 (5%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y + ++ + LI++A +QM T NC+ Y+ I + R L Y+
Sbjct: 13 YRSQISKLVKAGLINQAIYLFDQM-TESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYR-- 69
Query: 242 DERSVTPNTV-----TQNIVLGGYGKAGMFDQMERVLSGMLE--SATCKPDVWTMNTILS 294
R V P T + + A + + S +L+ S PD+W NT L+
Sbjct: 70 --RHVIPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLN 127
Query: 295 VFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 354
+ + +++ + + G DP+ ++ I+I A + +D+ + V R+L
Sbjct: 128 LLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVW---RRLIDKG 184
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHA---EGMKADTKTFCCLINGYANAGLFHKVI 411
S Y + + ++ +E + G+K ++ + LI+G+ G K +
Sbjct: 185 LSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAM 244
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
S+ ++ YN +++ C + + E R+ + M+ PD +++ + + +
Sbjct: 245 KIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGF 304
Query: 472 AKEGMNDKVYALEQEKLQ 489
K M D+ + + E++Q
Sbjct: 305 CKANMVDRAHLMMVERMQ 322
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 9/134 (6%)
Query: 116 SDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
S HV+KK + EM K + P Y ++ L K+G+ ++A VF +MVE G+
Sbjct: 379 STHVVKKL------LDEMTKMRVL--PDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGV 430
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
P Y ALL +C+ S + +A ++M++ PD TY ++ + + L
Sbjct: 431 NPDVISYNALLNGFCKTSRVMDAMHLFDEMQS-KGLYPDEVTYKLIVGGLIRGKKISLAC 489
Query: 236 TLYQDMDERSVTPN 249
++ M ER T N
Sbjct: 490 RVWDQMMERGFTLN 503
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 11/186 (5%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
NTV F ++ + ++FE + + +P T+ L+ + G + +K+ +
Sbjct: 333 NTVITAFCK---ARRTRKGYELFEEMCGKGI-RPDMVTFNILIDAFLREGSTHVVKKLLD 388
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
EM + + P YTA++ C+N +D A M PDV +Y+ L+
Sbjct: 389 EMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVE-NGVNPDVISYNALLNGFCKT 447
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
R L+ +M + + P+ VT +++GG + RV M+E +T
Sbjct: 448 SRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERG------FT 501
Query: 289 MNTILS 294
+N LS
Sbjct: 502 LNRHLS 507
>gi|168011113|ref|XP_001758248.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690704|gb|EDQ77070.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 658
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 144/312 (46%), Gaps = 2/312 (0%)
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
++ +V + +EG+E +LY ++ AYCR D+AF + M+ + PDV +YS+
Sbjct: 166 DVISRVCANIEQEGLEMDTKLYNDVINAYCRAGDPDKAFQYMGLMQAC-DLVPDVRSYSS 224
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
LI+ V R + E Y +M +S N T N +L Y + + +Q+E+++ E A
Sbjct: 225 LIETLVVVRRLDDAEAAYAEMKSKSYKINLRTLNALLSAYTRKSLLEQVEKLMQDA-EDA 283
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
K ++ ++ ++ G++D + + + + ++ L+ AY R +D
Sbjct: 284 GLKLSTFSYGLLIDAYSRAGRLDQAKAAFHNMKVENVPANAFIYSRLMVAYRNARQWDGT 343
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+++ M +N +I+ + G TF QM EG K D T+ LI
Sbjct: 344 IRLLKDMYASNIKPNQFIFNILIDTYGKFGRLPQAMRTFAQMDKEGFKPDVVTWNSLIEA 403
Query: 401 YANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
+ AGL + + ++ + + ++ YN +++A + EM + M+ K P+
Sbjct: 404 HCRAGLITEALDLLKQMQERECVPSLHTYNIILNALGWHNRWKEMALLLDEMRFKGLDPN 463
Query: 461 SETFSIMTEAYA 472
T++ + ++Y
Sbjct: 464 VVTYTTLVDSYG 475
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 145/315 (46%), Gaps = 2/315 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
+Y L+ ++G+ + A+ F+ M E + +Y+ L+ AY RN+ + + L +
Sbjct: 291 SYGLLIDAYSRAGRLDQAKAAFHNMKVENVPANAFIYSRLMVAY-RNARQWDGTIRLLKD 349
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
N +P+ + ++ LI R + MD+ P+ VT N ++ + +AG+
Sbjct: 350 MYASNIKPNQFIFNILIDTYGKFGRLPQAMRTFAQMDKEGFKPDVVTWNSLIEAHCRAGL 409
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+ +L M E C P + T N IL+ + M ++ R G+DP T+
Sbjct: 410 ITEALDLLKQMQER-ECVPSLHTYNIILNALGWHNRWKEMALLLDEMRFKGLDPNVVTYT 468
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
L+ +YG + Y + S ++ M+ ++S Y + +++ G + F+ M +
Sbjct: 469 TLVDSYGTSKRYREASEYLKQMKSQGLQPSTSVYCALANSYAKRGLCEQAMEVFKSMEKD 528
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G++ + LIN + AG + + S ++ ++ +V Y ++ A IKA+ L ++
Sbjct: 529 GVELNLSMLNLLINAFGVAGKYVEAFSVFDYILEVGMSPDVVTYTTLMKALIKAEQLDQV 588
Query: 446 ERVYKRMKEKHCRPD 460
VY++M C PD
Sbjct: 589 PDVYEQMVRAGCTPD 603
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 153/324 (47%), Gaps = 3/324 (0%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L K + E A +F+++ + G+ P P Y A++ R ++ A +NQM+ QP
Sbjct: 88 LSKESRVEEAMLLFDQLKQLGVSPGPMAYNAIVGTCAREDRLETALELMNQMRG-SGFQP 146
Query: 214 DVYTYSTLIKACVDA-MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
D Y+ + +AC + ++I + ++++ + +T N V+ Y +AG D+ +
Sbjct: 147 DNVNYTLVFQACAKKRVGVDVISRVCANIEQEGLEMDTKLYNDVINAYCRAGDPDKAFQY 206
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
+ G++++ PDV + ++++ ++D E Y + ++ RT N L+ AY
Sbjct: 207 M-GLMQACDLVPDVRSYSSLIETLVVVRRLDDAEAAYAEMKSKSYKINLRTLNALLSAYT 265
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
+K + +++ +M+ ++ +Y +I+A+S G + F M E + A+
Sbjct: 266 RKSLLEQVEKLMQDAEDAGLKLSTFSYGLLIDAYSRAGRLDQAKAAFHNMKVENVPANAF 325
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
+ L+ Y NA + I ++ I N +N +I K L + R + +M
Sbjct: 326 IYSRLMVAYRNARQWDGTIRLLKDMYASNIKPNQFIFNILIDTYGKFGRLPQAMRTFAQM 385
Query: 453 KEKHCRPDSETFSIMTEAYAKEGM 476
++ +PD T++ + EA+ + G+
Sbjct: 386 DKEGFKPDVVTWNSLIEAHCRAGL 409
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 99/220 (45%), Gaps = 5/220 (2%)
Query: 271 RVLSGMLESATCKPDVWTMNTILSV--FANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
++L+ ++ SA C + + + +++ + + +V+ +++ + G+ P +N ++
Sbjct: 61 KLLTLLISSAVCDSETIDLLSAIAITGLSKESRVEEAMLLFDQLKQLGVSPGPMAYNAIV 120
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD--MGDAKHMEYTFEQMHAEG 386
G ++ + +M MR F + Y V +A + +G + + EG
Sbjct: 121 GTCAREDRLETALELMNQMRGSGFQPDNVNYTLVFQACAKKRVG-VDVISRVCANIEQEG 179
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
++ DTK + +IN Y AG K + L + +V Y+++I + L + E
Sbjct: 180 LEMDTKLYNDVINAYCRAGDPDKAFQYMGLMQACDLVPDVRSYSSLIETLVVVRRLDDAE 239
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
Y MK K + + T + + AY ++ + ++V L Q+
Sbjct: 240 AAYAEMKSKSYKINLRTLNALLSAYTRKSLLEQVEKLMQD 279
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 3/205 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL + + ++E+ P TY +L LG + + + +EM +G++P YT L
Sbjct: 412 EALDLLKQMQERECV-PSLHTYNIILNALGWHNRWKEMALLLDEMRFKGLDPNVVTYTTL 470
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +Y + EA L QMK+ QP Y L + E +++ M++
Sbjct: 471 VDSYGTSKRYREASEYLKQMKS-QGLQPSTSVYCALANSYAKRGLCEQAMEVFKSMEKDG 529
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
V N N+++ +G AG + + V +LE PDV T T++ Q+D +
Sbjct: 530 VELNLSMLNLLINAFGVAGKYVEAFSVFDYILEVGM-SPDVVTYTTLMKALIKAEQLDQV 588
Query: 306 ERWYEKFRNFGIDPETRTFNILIGA 330
YE+ G P+ ++L A
Sbjct: 589 PDVYEQMVRAGCTPDDMAKDMLRSA 613
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/219 (18%), Positives = 90/219 (41%), Gaps = 9/219 (4%)
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
+FDQ++++ P N I+ A + +++ + R G P+ +
Sbjct: 100 LFDQLKQL--------GVSPGPMAYNAIVGTCAREDRLETALELMNQMRGSGFQPDNVNY 151
Query: 325 NILIGAYGKKRM-YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
++ A KKR+ D +S V + + + YN+VI A+ GD M
Sbjct: 152 TLVFQACAKKRVGVDVISRVCANIEQEGLEMDTKLYNDVINAYCRAGDPDKAFQYMGLMQ 211
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
A + D +++ LI ++ N+ NA++SA + L
Sbjct: 212 ACDLVPDVRSYSSLIETLVVVRRLDDAEAAYAEMKSKSYKINLRTLNALLSAYTRKSLLE 271
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
++E++ + ++ + + ++ ++ +AY++ G D+ A
Sbjct: 272 QVEKLMQDAEDAGLKLSTFSYGLLIDAYSRAGRLDQAKA 310
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 164/400 (41%), Gaps = 52/400 (13%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F + +P T+ L+ L + G+ A + + M+E+G++P Y +
Sbjct: 169 EALDLFHQM-----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTI 223
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ A L +M+ + + P+V Y+T+I R L+ +M E+
Sbjct: 224 VDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKE 283
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+ VT N ++ G+ +G + E++L MLE PDV T + +++ F +G+
Sbjct: 284 IFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKI-NPDVVTFSALINAFVKEGKFFEA 342
Query: 306 ERWYEKF--RNF---------------------------------GIDPETRTFNILIGA 330
E Y++ R+ G P+ TFN LI
Sbjct: 343 EELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAG 402
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
Y + + D ++ M + + TY +I F +GD + ++M + G+ +
Sbjct: 403 YCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPN 462
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQ-----------IAENVSFYNAVISACIKA 439
T L++G + G + + K + + +V YN +I I
Sbjct: 463 VVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINE 522
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+E E +Y+ M + PD+ T+S M + K+ D+
Sbjct: 523 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 562
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 147/340 (43%), Gaps = 27/340 (7%)
Query: 94 LKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVF-EMLKEQPFYQPKEGTYMKLLV 152
L++ LERK V T + + V + ++F+A +++ EML P TY ++
Sbjct: 311 LQEMLERKINPD--VVTFSALINAFVKEGKFFEAEELYDEMLPRSII--PSTVTYSSMID 366
Query: 153 LLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQ 212
K + + A +F +G P + L+A YCR +D+ L++M T
Sbjct: 367 GFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEM-TEAGLV 425
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------M 265
+ TY+TLI + L Q+M V PN VT N +L G G M
Sbjct: 426 ANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEM 485
Query: 266 FDQMERVLSGMLESAT-----CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
F M++ S M A+ +PDV T N ++ N+G+ E YE+ + GI P+
Sbjct: 486 FKAMQK--SKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPD 543
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T T++ +I K+ D+ + + + M F T+N +I + G F
Sbjct: 544 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFC 603
Query: 381 QMHAEGMKADTKTFCCLINGYANA-------GLFHKVISS 413
+M G+ AD T+ LI G+ +F ++ISS
Sbjct: 604 EMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISS 643
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 159/383 (41%), Gaps = 55/383 (14%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
+ +W A Q+ + + E+ P T+ L+ K G+ A ++++EM+ I P+
Sbjct: 300 ISGRWSDAEQLLQEMLERKI-NPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPST 358
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
Y++++ +C+ + +D A + + C PD+ T++TLI A R + L
Sbjct: 359 VTYSSMIDGFCKQNRLDAA-EHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLH 417
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
+M E + NT+T ++ G+ + G + + +L M+ S C P+V T NT+L +
Sbjct: 418 EMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVC-PNVVTCNTLLDGLCDN 476
Query: 300 GQV-DMMERW---------YEKFRNF-GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
G++ D +E + + R F G++P+ +T+NIL
Sbjct: 477 GKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNIL--------------------- 515
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
I + G E +E+M G+ DT T+ +I+G
Sbjct: 516 --------------ICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 561
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKA---DDLMEMERVYKRMKEKHCRPDSETFS 465
+ + +V +N +I+ KA DD +E+ + M ++ D+ T+
Sbjct: 562 EATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLEL---FCEMGQRGIVADAITYI 618
Query: 466 IMTEAYAKEGMNDKVYALEQEKL 488
+ + K D + QE +
Sbjct: 619 TLIYGFRKVDNIDGALDIFQEMI 641
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 162/414 (39%), Gaps = 18/414 (4%)
Query: 66 RLWKEGEY--PGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQ 123
R+ + G Y P VS + RS R + KK + ++ + + S K
Sbjct: 4 RVRRSGSYSSPAVSAARLFCTRSIRDTLA--KKSRDGESDEAGFGGESLKLQSGFHEIKG 61
Query: 124 WFQALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
A+ +F M++ +P P + KL+ ++ + G+P++ + +M + +
Sbjct: 62 LDDAIDLFGYMVRSRPL--PSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSF 119
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDM 241
T L+ +C S + A T ++ L P V T++TL+ CV+ E ++ +Q
Sbjct: 120 TILMKCFCSCSKLPFALSTFGKITKL-GFHPTVVTFNTLLHGLCVEDRISEALDLFHQ-- 176
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
PN VT ++ G + G + +L MLE +P+ T TI+ G
Sbjct: 177 ---MCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGL-QPNQITYGTIVDGMCKMGD 232
Query: 302 VDMMERWYEKFRNFG-IDPETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
K I P +N +I G + R D + +E K FP TY
Sbjct: 233 TVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFP-DIVTY 291
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
N +I F G E ++M + D TF LIN + G F +
Sbjct: 292 NCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLP 351
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
I + Y+++I K + L E ++ K C PD TF+ + Y +
Sbjct: 352 RSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCR 405
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/209 (19%), Positives = 84/209 (40%), Gaps = 11/209 (5%)
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
+ ++ ++ F + ++ + K G P TFN L+ + D++S +
Sbjct: 115 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVE---DRISEAL 171
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
+ ++ P T+ ++ G ++M +G++ + T+ +++G
Sbjct: 172 DLFHQMCKP-NVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 230
Query: 405 GLFHKVISSVRLASKLQ----IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
G +S++ L K++ I NV YN +I K + ++ M+EK PD
Sbjct: 231 G---DTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPD 287
Query: 461 SETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
T++ M + G L QE L+
Sbjct: 288 IVTYNCMINGFCISGRWSDAEQLLQEMLE 316
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 169/397 (42%), Gaps = 45/397 (11%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H Q AL VF+ + + +P + +LL L +SG P +A V+ +M G+ P
Sbjct: 158 HADAGQLSSALNVFDGMGKVGC-RPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLP 216
Query: 178 TPELYTALLA-AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
E A++A AYCR+ + +A + +M+ + + ++ Y ++ E
Sbjct: 217 D-EFTVAIMAKAYCRDGRVAQAVEFVEEMEGM-GLEVNLVAYHAVMDCYCGMGWTEDARR 274
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
+ + + + ++PN VT +++ GY K G ++ ERV+ M E+ D +++ +
Sbjct: 275 ILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGY 334
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
+G++D R + R+ GI +N +I K +++ V++ M +
Sbjct: 335 CQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDK 394
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
+YN +I+ + G + M G+ A T T+ L+ G+ + H + ++RL
Sbjct: 395 YSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCS---LHAIDDALRL 451
Query: 417 -------------------------ASKLQ-------------IAENVSFYNAVISACIK 438
A K + +A+NV +N VI+ K
Sbjct: 452 WFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCK 511
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ E E + RMKE C PDS T+ + + Y K G
Sbjct: 512 IGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLG 548
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/436 (20%), Positives = 175/436 (40%), Gaps = 40/436 (9%)
Query: 54 SFSSESAVAAKKRLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAE 113
F S A+ RLW GV+ I S T + L K + + W T+A
Sbjct: 438 GFCSLHAIDDALRLWFLMLKRGVAPNEI----SCSTLLDGLFKAGKTEQALNLWKETLAR 493
Query: 114 TFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE 173
+ +V+ T+ ++ L K G+ A ++ + M E
Sbjct: 494 GLAKNVI-------------------------TFNTVINGLCKIGRMAEAEELLDRMKEL 528
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
P Y L YC+ + A +N+M+ L P V +++ I A ++
Sbjct: 529 RCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHL-GFAPSVEMFNSFITGHFIAKQWHK 587
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
+ ++ +M R ++PN VT ++ G+ K G + + M+ + P+V+ + ++
Sbjct: 588 VNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGM-NPNVFICSALM 646
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
S F +G+VD +K N + P I I DK+S V++ +
Sbjct: 647 SCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEI---------DKISHVVDTIADGNPH 697
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
+ +N +I G + FE + + D T+ LI+G A +G + S
Sbjct: 698 SANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSL 757
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ + N+ YN++I K+ L ++ +++ K P+ T++ + + Y K
Sbjct: 758 RDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCK 817
Query: 474 EGMNDKVYALEQEKLQ 489
EG + + L+Q+ ++
Sbjct: 818 EGKTTEAFKLKQKMVE 833
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 168/422 (39%), Gaps = 43/422 (10%)
Query: 108 VNTVA-ETFSDHVLKKQWFQ-ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARK 165
VN VA D W + A ++ E L+ + P TY L+ K G+ E A +
Sbjct: 251 VNLVAYHAVMDCYCGMGWTEDARRILESLQRKGL-SPNVVTYTLLVKGYCKDGRMEEAER 309
Query: 166 VFNEMVEEGIEPTPEL-YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
V EM E G E+ Y ++ YC+ +D+A N+M+ +++ Y+T+I
Sbjct: 310 VVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRD-AGIHVNLFVYNTMING 368
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
R E ++ + Q+M++ + P+ + N ++ GY + G + + M+ +
Sbjct: 369 LCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAAT 428
Query: 285 DVWTMNTILSVFANKGQVD--------MMER----------------------------W 308
+ T NT+L F + +D M++R W
Sbjct: 429 TL-TYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLW 487
Query: 309 YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD 368
E G+ TFN +I K + +++ M++L+ P S TY + + +
Sbjct: 488 KETLAR-GLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCK 546
Query: 369 MGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSF 428
+G + +M G + F I G+ A +HKV S ++ N+
Sbjct: 547 LGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVT 606
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
Y A+I+ K +L E +Y M P+ S + + KEG D+ + Q+ +
Sbjct: 607 YGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLV 666
Query: 489 QM 490
+
Sbjct: 667 NI 668
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 142/341 (41%), Gaps = 5/341 (1%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL +GQ A VF+ M + G P+ LL ++ A + QM+ +
Sbjct: 154 LLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMR-IA 212
Query: 210 NCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
PD +T + + KA C D + +E ++M+ + N V + V+ Y G +
Sbjct: 213 GVLPDEFTVAIMAKAYCRDGRVAQAVE-FVEEMEGMGLEVNLVAYHAVMDCYCGMGWTED 271
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG-IDPETRTFNIL 327
R+L L+ P+V T ++ + G+++ ER ++ + G I + + ++
Sbjct: 272 ARRILES-LQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMM 330
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
I Y ++ D + V MR YN +I +G + ++ ++M GM
Sbjct: 331 INGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGM 390
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
+ D ++ LI+GY G K R+ + +A YN ++ + + R
Sbjct: 391 RPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALR 450
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
++ M ++ P+ + S + + K G ++ L +E L
Sbjct: 451 LWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETL 491
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 138/319 (43%), Gaps = 47/319 (14%)
Query: 96 KKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLL 154
K++ERK + V T + +W A ++ +M+K++ P TY LL
Sbjct: 214 KEIERKG-IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK--ITPNVITYSALLDAF 270
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL---PNC 211
K+G+ A+++F EMV I+P Y++L+ C + IDEA NQM L C
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA----NQMFDLMVSKGC 326
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
DV +Y+TLI A R E L+++M +R + NTVT N ++ G+ +A
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA-------- 378
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
G VD + ++ + FGI P+ T+NIL+G
Sbjct: 379 ----------------------------GDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
+K + E M+K + TY VI G + F + +G+K D
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 470
Query: 392 KTFCCLINGYANAGLFHKV 410
T+ +++G GL H+V
Sbjct: 471 VTYTTMMSGLCTKGLLHEV 489
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 157/345 (45%), Gaps = 4/345 (1%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y+P T L+ + + A + ++MVE G +P Y A++ + C+ +++AF
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+++ +P+V TY+ L+ ++ R+ L DM ++ +TPN +T + +L
Sbjct: 211 DFFKEIER-KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 269
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ K G + + + M+ + PD+ T +++++ ++D + ++ + G
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSI-DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLA 328
Query: 320 ETRTFNILIGAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
+ ++N LI + K KR+ D M E M + + TYN +I+ F GD +
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFRE-MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
F QM G+ D T+ L+ G + G K + K ++ ++ Y VI K
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ E ++ + K +PD T++ M +G+ +V AL
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 492
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 144/337 (42%), Gaps = 39/337 (11%)
Query: 159 QPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTY 218
Q LA + +M++ G EP +L+ +CR + + +A +++M + +PD+ Y
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY-KPDIVAY 193
Query: 219 STLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
+ +I + R +++++ + + PN VT ++ G + + R+LS M++
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
P+V T + +L F G+V + +E+ IDP+ T++ LI ++D
Sbjct: 254 KKI-TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC---LHD 309
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
++ +A M F+ M ++G AD ++ LI
Sbjct: 310 RID-----------------------------EANQM---FDLMVSKGCLADVVSYNTLI 337
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
NG+ A + R S+ + N YN +I +A D+ + + + +M
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
Query: 459 PDSETFSIMTEAYAKEGMNDKVYAL--EQEKLQMLLE 493
PD T++I+ G +K + + +K +M L+
Sbjct: 398 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 434
>gi|302776342|ref|XP_002971343.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
gi|300161325|gb|EFJ27941.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
Length = 584
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 176/410 (42%), Gaps = 16/410 (3%)
Query: 86 SKRTPIKNLKKKLE--RKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPK 143
SK T + + + LE R A V T + +A ++F+ + + QP
Sbjct: 106 SKSTRLADAARALELMRDAGIHPDVVTFTVMIRGFCKNRMMERAWEIFQEMIKSNRCQPD 165
Query: 144 EGTYMKLLVLLGKSGQPELARKVFNEM-VEEGIEPTPELYTALLAAYCRNSLIDEAFVTL 202
Y L+ K + + A ++ EM VE I+P +Y +++ CR++ EA+ L
Sbjct: 166 CFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFL 225
Query: 203 NQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGK 262
++ L C P V TY++LI+ A + +L ++ M ER + P V+ ++++ G K
Sbjct: 226 DETMVLQGCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQPTIVSYSVIIDGLSK 285
Query: 263 AGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETR 322
AG RV+ M E+ C+ +V T++ G +D Y + G P R
Sbjct: 286 AGRVYDAYRVVREM-ETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQR 344
Query: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS---DMGDAKHMEYTF 379
T+ LI + + + + +++R P + Y V+ + DA+ + F
Sbjct: 345 TYATLIDTFCRNDRTETALGLFDHIRD-YCPLDVAMYTAVVSGLCRERRLDDARAL---F 400
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV-RLASKLQIAENVSFYNAVISACIK 438
+M G+ ADT + L++G + + + L N+ YN VI+ C
Sbjct: 401 REMRLAGVSADTHAYNVLLHGAFRSERPEEAFRILEELGDDPGCVANLLTYNTVIAGCCL 460
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
++ ++ M+++ PD T+S + + G + + L +E L
Sbjct: 461 ESGMV----LFYEMRQRGIAPDFATYSALIDRLLGSGEIGRAFDLCEEML 506
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 135/335 (40%), Gaps = 18/335 (5%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P + + L+ L KS + A + M + GI P +T ++ +C+N +++ A+
Sbjct: 93 PNQHAFASLIDALSKSTRLADAARALELMRDAGIHPDVVTFTVMIRGFCKNRMMERAWEI 152
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD-ERSVTPNTVTQNIVLGGY 260
+M CQPD + Y LI +R + L ++M ER + P+ V N ++ G
Sbjct: 153 FQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGL 212
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
++ F + + L + C P V T +++ ++ + R + I P
Sbjct: 213 CRSNRFLEAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQPT 272
Query: 321 TRTFNILIGAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+++++I K R+YD V E M L Y +I+ G +
Sbjct: 273 IVSYSVIIDGLSKAGRVYDAYRVVRE-METLGCELNVVIYTTLIDGLCKSGFLDDAYALY 331
Query: 380 EQMHAEGMKADTKTFCCLINGYAN-------AGLFHKVISSVRLASKLQIAENVSFYNAV 432
M G + +T+ LI+ + GLF + L +V+ Y AV
Sbjct: 332 RIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDYCPL--------DVAMYTAV 383
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+S + L + +++ M+ D+ ++++
Sbjct: 384 VSGLCRERRLDDARALFREMRLAGVSADTHAYNVL 418
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/331 (19%), Positives = 133/331 (40%), Gaps = 5/331 (1%)
Query: 151 LVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPN 210
L+ L +SG A + E G L + ++ C++ + A + L M
Sbjct: 31 LLALHESGDANAAARFLREKTAAGSIFPGFLSSVVIDRACKSGDLRGALLILATMLHSGT 90
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
P+ + +++LI A + R + M + + P+ VT +++ G+ K M ++
Sbjct: 91 PPPNQHAFASLIDALSKSTRLADAARALELMRDAGIHPDVVTFTVMIRGFCKNRMMERAW 150
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVD-MMERWYEKFRNFGIDPETRTFN-ILI 328
+ M++S C+PD + ++ + + ++D +E E I P+ +N I+
Sbjct: 151 EIFQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVD 210
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
G R + + E M T TY ++I K + M ++
Sbjct: 211 GLCRSNRFLEAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQ 270
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
++ +I+G + AG + VR L NV Y +I K+ L + +
Sbjct: 271 PTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYAL 330
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
Y+ MK P+ T++ + + + + ND+
Sbjct: 331 YRIMKRSGAFPNQRTYATLIDTFCR---NDR 358
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 148/340 (43%), Gaps = 10/340 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ LGK + A K+F EM G+ YTAL+ + I +A
Sbjct: 327 PDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSV 386
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
M T C PDV T ST+I A R +++ M+ R + PN V + ++ G
Sbjct: 387 YKTM-TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC 445
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
KA D +L+ M + A C PD T N ++ G V+ ++++ G P+
Sbjct: 446 KARKMDCALEMLAQM-KKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDV 504
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+NILI K D V++ M +F Y+++++ G + F +
Sbjct: 505 YTYNILISGLCKAGNTDAACGVLDDMSSSRF-----VYSSLVDGLCKSGKLEGGCMLFHE 559
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G+ A+++T LI A + +S K + + YN++ISA IK+
Sbjct: 560 MERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYA-YNSIISALIKSGK 617
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
+ E + VY+ M + +PD T++ + D+ +
Sbjct: 618 VNEGQAVYQEMT-RWWKPDRVTYNALLNGMIGANRMDRAH 656
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 2/260 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY ++ L K+ + + A + ++ G PT Y ALL C+ ++EA L ++
Sbjct: 261 TYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 320
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
C PDV TY++LI R L+++M R + +TV ++ G + G
Sbjct: 321 VD-NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGK 379
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
Q V M S C PDV T++T++ + G++ R ++ G+ P ++
Sbjct: 380 IPQASSVYKTM-TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYS 438
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
LI K R D ++ M+K + TYN +I+ GD + F++M
Sbjct: 439 ALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEA 498
Query: 386 GMKADTKTFCCLINGYANAG 405
G K D T+ LI+G AG
Sbjct: 499 GCKPDVYTYNILISGLCKAG 518
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 147/364 (40%), Gaps = 3/364 (0%)
Query: 115 FSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG 174
+ + L ++ +A V ++E P T+ +L L KSG+ A F E V
Sbjct: 161 ITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHF-EAVRRS 219
Query: 175 IEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELI 234
+ + ++ L+ + ++ +A +L Q T C D++TY+ ++ + +
Sbjct: 220 MPVSAATFSILINGLVKAGMMIQAH-SLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEA 278
Query: 235 ETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILS 294
L + + TP T N +L G K G ++ +L ++++ C PDV T +++
Sbjct: 279 VALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG-CTPDVVTYTSLID 337
Query: 295 VFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 354
+ + + +++ + G+ +T + LI + + SSV + M
Sbjct: 338 GLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVP 397
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
T + +I+ S G F+ M A G+ + + LI+G A + +
Sbjct: 398 DVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML 457
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
K + YN +I K+ D+ + M E C+PD T++I+ K
Sbjct: 458 AQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKA 517
Query: 475 GMND 478
G D
Sbjct: 518 GNTD 521
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 146/356 (41%), Gaps = 12/356 (3%)
Query: 139 FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE-GIEPTPELYTALLAAYCRNSLIDE 197
++P T+ L+ + +PE A V EM E+ G+ P+ + + +L C++ +
Sbjct: 149 IFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSG---K 205
Query: 198 AFVTLNQMKTLPNCQP-DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIV 256
++ + + P T+S LI V A +L Q+ T + T +
Sbjct: 206 VLAAMDHFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAI 265
Query: 257 LGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG 316
+ K + ++ + + C P + T N +L+ G+++ K + G
Sbjct: 266 VNWLAKNKKIQEAVALMEKITANG-CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG 324
Query: 317 IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME 376
P+ T+ LI GK++ + + + M + Y +I G
Sbjct: 325 CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQAS 384
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVI 433
++ M + G D T +I+G + AG ++ ++VR+ ++ +A N Y+A+I
Sbjct: 385 SVYKTMTSHGCVPDVVTLSTMIDGLSKAG---RIGAAVRIFKSMEARGLAPNEVVYSALI 441
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
KA + + +MK+ C PD+ T++I+ + K G + A E L+
Sbjct: 442 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLE 497
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL++ +K + F P TY L+ L KSG E AR F+EM+E G +P Y L+
Sbjct: 453 ALEMLAQMK-KAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILI 511
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+ C+ D A L+ M + + YS+L+ + + E L+ +M ERS
Sbjct: 512 SGLCKAGNTDAACGVLDDMSS------SRFVYSSLVDGLCKSGKLEGGCMLFHEM-ERSG 564
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD--- 303
N+ T+ ++ KA D+ + + + + P + N+I+S G+V+
Sbjct: 565 VANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM--PHPYAYNSIISALIKSGKVNEGQ 622
Query: 304 ----MMERWYEKFRNFGIDPETRTFNILI-GAYGKKRM 336
M RW++ P+ T+N L+ G G RM
Sbjct: 623 AVYQEMTRWWK--------PDRVTYNALLNGMIGANRM 652
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
T +L+ L K+ + + A +FN + +EG+ P P Y ++++A ++ ++E +M
Sbjct: 570 TRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEM 628
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP 248
+PD TY+ L+ + A R + Y +M R P
Sbjct: 629 TRW--WKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVP 669
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 160/351 (45%), Gaps = 6/351 (1%)
Query: 127 ALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
AL+V + +LK+ +P TY L+ G + A K+ +EM+ G+ P Y +
Sbjct: 200 ALRVMDQLLKDN--CKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVV 257
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ ++D AF L+++ C V TY+ L++ ++ ++E E L DM +
Sbjct: 258 VNGMCKEGMLDRAFEFLSRISK-NGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKG 316
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
PN +T + ++ + G D+ + VL M E A PD ++ + ++S +G+VD+
Sbjct: 317 CEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKAL-APDGYSYDPLISALCREGKVDLA 375
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ + + G P+ ++N ++ + K D+ ++ E + ++ P + +YN + A
Sbjct: 376 IEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGA 435
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS-VRLASKLQIAE 424
GD +M + G+ D T+ LI+ GL + I V + +
Sbjct: 436 LWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQP 495
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
V YN V+ K +++ V M + C P+ T++++ + G
Sbjct: 496 TVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAG 546
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 160/373 (42%), Gaps = 9/373 (2%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K+ +A+QV E+L++ +P Y ++ K+ + + A KV + M + G EP
Sbjct: 126 KKIEKAIQVMEILEKHG--KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVT 183
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y L+ +C +D A ++Q+ NC+P V TY+ LI+A + + L +M
Sbjct: 184 YNILIGNFCGRGRLDLALRVMDQLLK-DNCKPTVITYTILIEATITQGGIDEAMKLLDEM 242
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
R + P+ T N+V+ G K GM D+ LS + ++ C V T N +L N+G+
Sbjct: 243 LSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNG-CVAGVSTYNILLRDLLNEGK 301
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ E+ G +P T++ LI A + D+ +V++ M++ +Y+
Sbjct: 302 WEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDP 361
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+I A G + M + G D ++ ++ G + ++ ++
Sbjct: 362 LISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVG 421
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
N YN + A + D + + M PD T++ + ++G+ D+
Sbjct: 422 CPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAI 481
Query: 482 AL-----EQEKLQ 489
L E EK Q
Sbjct: 482 ELLVDMFESEKCQ 494
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 120/262 (45%), Gaps = 7/262 (2%)
Query: 220 TLIKACVDAMRFELIETLY--QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
TL ++C A +++ E+LY Q M R P+ + ++ G+ ++ +V+ +L
Sbjct: 83 TLNRSCKSA-KYD--ESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVME-IL 138
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
E KPDV+ N ++S F +VD + ++ + G +P+ T+NILIG + +
Sbjct: 139 EKHG-KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRL 197
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
D VM+ + K T TY +IEA G ++M + G++ D T+ +
Sbjct: 198 DLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVV 257
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
+NG G+ + + SK VS YN ++ + E++ M K C
Sbjct: 258 VNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGC 317
Query: 458 RPDSETFSIMTEAYAKEGMNDK 479
P+ T+S + A ++G D+
Sbjct: 318 EPNPITYSTLITALCRDGKIDE 339
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 2/207 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A V +++KE+ P +Y L+ L + G+ +LA + ++M+ G P Y ++
Sbjct: 339 EAKNVLKVMKEKAL-APDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSI 397
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
LA+ C+N DEA ++ + C P+ +Y+TL A + + +M
Sbjct: 398 LASLCKNGNADEALNIFEKLGEV-GCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNG 456
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+ +T N ++ + G+ DQ +L M ES C+P V + NT+L ++
Sbjct: 457 IDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDA 516
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYG 332
N G P T+ +LI G
Sbjct: 517 IEVLAAMVNEGCLPNETTYTLLIQGIG 543
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +FE L E P G+Y L L SG A + EM+ GI+P Y +L
Sbjct: 409 EALNIFEKLGEVG-CPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSL 467
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMR-FELIETLYQDMDER 244
++ CR+ L+D+A L M CQP V +Y+T++ R + IE L ++E
Sbjct: 468 ISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEG 527
Query: 245 SVTPNTVTQNIVLGGYGKAG-MFDQME 270
+ PN T +++ G G AG +D ME
Sbjct: 528 CL-PNETTYTLLIQGIGFAGWRYDAME 553
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 65/168 (38%), Gaps = 1/168 (0%)
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
N G P+ LI + + +K VME + K P + YN VI F
Sbjct: 105 NRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHGKPDVFA-YNAVISGFCKADRVD 163
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
H ++M G + D T+ LI + G + + K V Y +I
Sbjct: 164 HASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILI 223
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
A I + E ++ M + RPD T++++ KEGM D+ +
Sbjct: 224 EATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAF 271
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 169/397 (42%), Gaps = 45/397 (11%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H Q AL VF+ + + +P + +LL L +SG P +A V+ +M G+ P
Sbjct: 158 HADAGQLSSALNVFDGMGKVGC-RPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLP 216
Query: 178 TPELYTALLA-AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
E A++A AYCR+ + +A + +M+ + + ++ Y ++ E
Sbjct: 217 D-EFTVAIMAKAYCRDGRVAQAVEFVEEMEGM-GLEVNLVAYHAVMDCYCGMGWTEDARR 274
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
+ + + + ++PN VT +++ GY K G ++ ERV+ M E+ D +++ +
Sbjct: 275 ILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGY 334
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
+G++D R + R+ GI +N +I K +++ V++ M +
Sbjct: 335 CQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDK 394
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
+YN +I+ + G + M G+ A T T+ L+ G+ + H + ++RL
Sbjct: 395 YSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCS---LHAIDDALRL 451
Query: 417 -------------------------ASKLQ-------------IAENVSFYNAVISACIK 438
A K + +A+NV +N VI+ K
Sbjct: 452 WFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCK 511
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ E E + RMKE C PDS T+ + + Y K G
Sbjct: 512 IGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLG 548
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/436 (20%), Positives = 175/436 (40%), Gaps = 40/436 (9%)
Query: 54 SFSSESAVAAKKRLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAE 113
F S A+ RLW GV+ I S T + L K + + W T+A
Sbjct: 438 GFCSLHAIDDALRLWFLMLKRGVAPNEI----SCSTLLDGLFKAGKTEQALNLWKETLAR 493
Query: 114 TFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE 173
+ +V+ T+ ++ L K G+ A ++ + M E
Sbjct: 494 GLAKNVI-------------------------TFNTVINGLCKIGRMAEAEELLDRMKEL 528
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
P Y L YC+ + A +N+M+ L P V +++ I A ++
Sbjct: 529 RCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHL-GFAPSVEMFNSFITGHFIAKQWHK 587
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
+ ++ +M R ++PN VT ++ G+ K G + + M+ + P+V+ + ++
Sbjct: 588 VNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGM-NPNVFICSALM 646
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
S F +G+VD +K N + P I I DK+S V++ +
Sbjct: 647 SCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEI---------DKISHVVDTIADGNPH 697
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
+ +N +I G + FE + + D T+ LI+G A +G + S
Sbjct: 698 SANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSL 757
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ + N+ YN++I K+ L ++ +++ K P+ T++ + + Y K
Sbjct: 758 RDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCK 817
Query: 474 EGMNDKVYALEQEKLQ 489
EG + + L+Q+ ++
Sbjct: 818 EGKTTEAFKLKQKMVE 833
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 168/422 (39%), Gaps = 43/422 (10%)
Query: 108 VNTVA-ETFSDHVLKKQWFQ-ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARK 165
VN VA D W + A ++ E L+ + P TY L+ K G+ E A +
Sbjct: 251 VNLVAYHAVMDCYCGMGWTEDARRILESLQRKGL-SPNVVTYTLLVKGYCKDGRMEEAER 309
Query: 166 VFNEMVEEGIEPTPEL-YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
V EM E G E+ Y ++ YC+ +D+A N+M+ +++ Y+T+I
Sbjct: 310 VVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRD-AGIHVNLFVYNTMING 368
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
R E ++ + Q+M++ + P+ + N ++ GY + G + + M+ +
Sbjct: 369 LCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAAT 428
Query: 285 DVWTMNTILSVFANKGQVD--------MMER----------------------------W 308
+ T NT+L F + +D M++R W
Sbjct: 429 TL-TYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLW 487
Query: 309 YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD 368
E G+ TFN +I K + +++ M++L+ P S TY + + +
Sbjct: 488 KETLAR-GLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCK 546
Query: 369 MGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSF 428
+G + +M G + F I G+ A +HKV S ++ N+
Sbjct: 547 LGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVT 606
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
Y A+I+ K +L E +Y M P+ S + + KEG D+ + Q+ +
Sbjct: 607 YGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLV 666
Query: 489 QM 490
+
Sbjct: 667 NI 668
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 140/334 (41%), Gaps = 5/334 (1%)
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
+GQ A VF+ M + G P+ LL ++ A + QM+ + PD +
Sbjct: 161 AGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMR-IAGVLPDEF 219
Query: 217 TYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
T + + KA C D + +E ++M+ + N V + V+ Y G + R+L
Sbjct: 220 TVAIMAKAYCRDGRVAQAVE-FVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILES 278
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG-IDPETRTFNILIGAYGKK 334
L+ P+V T ++ + G+++ ER ++ + G I + + ++I Y ++
Sbjct: 279 -LQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQR 337
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
D + V MR YN +I +G + ++ ++M GM+ D ++
Sbjct: 338 GRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSY 397
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
LI+GY G K R+ + +A YN ++ + + R++ M +
Sbjct: 398 NTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLK 457
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
+ P+ + S + + K G ++ L +E L
Sbjct: 458 RGVAPNEISCSTLLDGLFKAGKTEQALNLWKETL 491
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 141/349 (40%), Gaps = 20/349 (5%)
Query: 115 FSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG 174
+ H + KQW + + + + P TY L+ K G A ++ EMV G
Sbjct: 576 ITGHFIAKQWHKVNDIHSEMSARGL-SPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNG 634
Query: 175 IEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC-VDAMRFEL 233
+ P + +AL++ + + +DEA + L ++ + +I C + + +
Sbjct: 635 MNPNVFICSALMSCFYKEGKVDEANLVLQKLVNI-----------DMIPGCSISTIEIDK 683
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
I + + + + V N+++ G K+G + + L + PD +T ++++
Sbjct: 684 ISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFES-LRNKRFLPDNFTYSSLI 742
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
A G +D + + G+ P T+N LI K K+S + KLQ
Sbjct: 743 HGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKS---GKLSRAVNLFNKLQSK 799
Query: 354 WTSS---TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
S TYN +I+ + G ++M EG++ T+ LI G G +
Sbjct: 800 GISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEA 859
Query: 411 ISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
I + + + N Y +I IK+ ++ E+ ++Y M + P
Sbjct: 860 IKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 908
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 153/356 (42%), Gaps = 12/356 (3%)
Query: 133 MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKV-FNEMVEEGIEPTPELYTALLAAYCR 191
ML + P P Y L+ SG+ E A+ + + MV G EP + ++ C+
Sbjct: 327 MLSKIP--NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCK 384
Query: 192 NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTV 251
+ A L++M +P+V TY+ LI FE + M + ++ NTV
Sbjct: 385 KGYLVSALEFLDEMVK-KGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTV 443
Query: 252 TQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK 311
N ++G K G Q + G + S CKPD++T N+++ D ME
Sbjct: 444 GYNCLIGALCKDGKI-QDALQMYGEMSSKGCKPDIYTFNSLIYGLCKN---DKMEEALGL 499
Query: 312 FRNF---GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD 368
+R+ G+ T T+N LI A+ + + + ++ MR P + TYN +I+A
Sbjct: 500 YRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCK 559
Query: 369 MGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSF 428
G + EQM E + + LIN + G + + +R + + ++
Sbjct: 560 TGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVT 619
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM-NDKVYAL 483
YN++I+ K E ++ ++ K PD+ T++ + Y EG+ ND L
Sbjct: 620 YNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLL 675
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 163/412 (39%), Gaps = 65/412 (15%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
++P +Y +L +L P++A VF +M+ GI PT + ++ A+C + +D A
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220
Query: 200 VTLNQMK---TLPN-------------------------------CQPDVYTYSTLIKAC 225
L M +PN C+PDV T++ +I
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGL 280
Query: 226 VDAMRFELIETLYQDMDERSVT-------------------------------PNTVTQN 254
A R L+ M R T PNTV N
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYN 340
Query: 255 IVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRN 314
++ GY +G F++ + +L + A +PD +T N ++ KG + + ++
Sbjct: 341 TLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVK 400
Query: 315 FGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKH 374
G +P T+ ILI + K+ +++ S V+ M + YN +I A G +
Sbjct: 401 KGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQD 460
Query: 375 MEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVIS 434
+ +M ++G K D TF LI G + + R + N YN +I
Sbjct: 461 ALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIH 520
Query: 435 ACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
A ++ + + + +++ M+ + C D+ T++ + +A K G +K L ++
Sbjct: 521 AFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQ 572
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 137/297 (46%), Gaps = 12/297 (4%)
Query: 117 DHVLKKQWF-QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG 174
D + KK + AL+ EM+K+ ++P TY L+ K G E A KV N M +G
Sbjct: 380 DGLCKKGYLVSALEFLDEMVKKG--FEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKG 437
Query: 175 IEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELI 234
+ Y L+ A C++ I +A +M + C+PD+YT+++LI + E
Sbjct: 438 LSLNTVGYNCLIGALCKDGKIQDALQMYGEMSS-KGCKPDIYTFNSLIYGLCKNDKMEEA 496
Query: 235 ETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILS 294
LY+DM V NTVT N ++ + + + Q ++ L G + C D T N ++
Sbjct: 497 LGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADK-LVGEMRFRGCPLDNITYNGLIK 555
Query: 295 VFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK-LQFP 353
G + E+ I P + NILI ++ + K++ ++++R +Q
Sbjct: 556 ALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRT---GKVNDALQFLRDMIQRG 612
Query: 354 WTSS--TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
T TYN++I MG + F + A+G+ D T+ LI+ Y GLF+
Sbjct: 613 LTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFN 669
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 110/293 (37%), Gaps = 34/293 (11%)
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
+ Y LI + F++I+ L + M + +++ YGKAG+ Q R+L
Sbjct: 95 HVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLD 154
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
M +P + N +L + + + + GI P TF +++ A+
Sbjct: 155 MWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVN 214
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
D S++ M K S Y +I A S+ E+M G + D +TF
Sbjct: 215 EVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFN 274
Query: 396 CLINGYANAGLFH--------------------------------KVISSVRLASKLQIA 423
+I+G AG H KV + + SK+
Sbjct: 275 DVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP-N 333
Query: 424 ENVSFYNAVISACIKADDLMEM-ERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
N YN +I+ + + E + +YK M PD+ TF+IM + K+G
Sbjct: 334 PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKG 386
>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
Length = 912
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 134/292 (45%), Gaps = 3/292 (1%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y A+L + + + I A +Q+ +PDV TY+T+I+ + +IE
Sbjct: 220 YNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRG---YCKMGMIENAKNVF 276
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
DE PN VT N ++ G+ K G+ + +++ M E+ C PD T T++ + +G+
Sbjct: 277 DEMGCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGE 336
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
++ ++ E+ + +P T+N +I D+ +M MR +T+ +
Sbjct: 337 LEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTS 396
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+++ +G ++M GM+AD K + ++N Y G IS ++
Sbjct: 397 ILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRG 456
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
I +VS +NAV +++ + + ++MK+ C P+ ++S + + K
Sbjct: 457 INPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCK 508
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 151/348 (43%), Gaps = 8/348 (2%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEG-IEPTPELYTALLAAYCRNSLIDEAFVTLNQ 204
+Y +L + K+ + LAR VF+++V+EG ++P YT ++ YC+ +I+ A ++
Sbjct: 219 SYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDE 278
Query: 205 MKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKA 263
M C+P++ TY+T+I C + ++ + Q + P+TVT ++ GY K
Sbjct: 279 M----GCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKR 334
Query: 264 GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
G ++ + + M+ S C+P+V T N I+ G VD +R + R G+ T
Sbjct: 335 GELEEAMKYMEEMV-SRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVAT 393
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
++ D + ++ M L + Y V+ + +G A ++M
Sbjct: 394 HTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMK 453
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
+ G+ +F + +G K +R +L N Y+ VI KA M
Sbjct: 454 SRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRM 513
Query: 444 -EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
E+E M D+ +S + + Y ++G D L E L M
Sbjct: 514 HEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDM 561
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 129/285 (45%), Gaps = 5/285 (1%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A VF+ + ++ +P TY ++ K G E A+ VF+EM G +P Y ++
Sbjct: 236 ARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEM---GCKPNLVTYNTMI 292
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+C+ L++ A ++QM +C PD TY+TLI E ++M R+
Sbjct: 293 NGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNC 352
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PN +T N ++ G G D+ +R+++ M + K +V T +IL G++D
Sbjct: 353 EPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGL-KDNVATHTSILKGLCVVGKLDDAA 411
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
R ++ G++ + + + +++ Y K D S+++ M+ + S++N V
Sbjct: 412 RHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRIL 471
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA-GLFHKV 410
+ G QM G + ++ +I+G A G H+V
Sbjct: 472 VESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEV 516
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 8/220 (3%)
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI-DPETRTFNILIGAYGKKR 335
+ES C +++ N IL VF ++ + +++ G+ P+ T+ +I Y K
Sbjct: 211 MESGRC---LFSYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMG 267
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM-HAEGMKADTKTF 394
M + +V + M TYN +I F G + +QM E DT T+
Sbjct: 268 MIENAKNVFDEM---GCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTY 324
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
LI+GY G + + + NV YNA+I ++ E +R+ RM+
Sbjct: 325 TTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRL 384
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEA 494
+ + T + + + G D +E + + +EA
Sbjct: 385 NGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEA 424
>gi|356502612|ref|XP_003520112.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 697
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 151/322 (46%), Gaps = 6/322 (1%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
LG S + A + F +M +G+ + E+ AL+ ++C L +A + ++M+
Sbjct: 297 LGHSAKD--AWQFFEKMNRKGVRWSEEVLGALINSFCVEGLRRQALIIQSEMEK-KGVSS 353
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
Y+TL+ A + E E L+ +M + + P T NI++ Y + +E++L
Sbjct: 354 SAIVYNTLMDAFCKSNHIEAAEGLFVEMKAKGIKPIAATYNILMHAYSRRMQPKIVEKLL 413
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERW--YEKFRNFGIDPETRTFNILIGAY 331
M + KP+ + ++ + + + M + K + G+ P ++++ LI AY
Sbjct: 414 EEM-QDVGLKPNATSYTCLIIAYGKQKNMSDMAAADAFLKMKKVGVKPTSQSYTALIHAY 472
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
+++K + E M+ + TY ++ AF GDA+ + ++ M +E ++
Sbjct: 473 SVSGLHEKAYAAFENMQNEGIKPSIETYTTLLNAFRHAGDAQTLMEIWKLMISEKVEGTG 532
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
TF L++G+A GLF + + K+ + V YN +I+A + ++ ++ K
Sbjct: 533 ATFNILVDGFAKQGLFMEAREVISEFGKVGLKPTVVTYNMLINAYARGGQHSKLPQLLKE 592
Query: 452 MKEKHCRPDSETFSIMTEAYAK 473
M +PDS T+S M A+ +
Sbjct: 593 MAVLKLKPDSVTYSTMIFAFVR 614
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 166/392 (42%), Gaps = 44/392 (11%)
Query: 134 LKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNS 193
L+E P+ T L LLGK G + +F + +Y A ++ +
Sbjct: 206 LQEPSLVTPRACTV--LFPLLGKGGMGDEVMDLFRNLPSSNEFRDVHVYNATISGLLSSG 263
Query: 194 LIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA----------------------------- 224
++A+ M+T N PD T S ++
Sbjct: 264 RSEDAWKVYESMET-ENIHPDHMTCSIMVTVMRELGHSAKDAWQFFEKMNRKGVRWSEEV 322
Query: 225 --------CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
CV+ +R + + + +M+++ V+ + + N ++ + K+ + E + M
Sbjct: 323 LGALINSFCVEGLRRQAL-IIQSEMEKKGVSSSAIVYNTLMDAFCKSNHIEAAEGLFVEM 381
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
++ KP T N ++ ++ + Q ++E+ E+ ++ G+ P ++ LI AYGK++
Sbjct: 382 -KAKGIKPIAATYNILMHAYSRRMQPKIVEKLLEEMQDVGLKPNATSYTCLIIAYGKQKN 440
Query: 337 YDKMSSVMEY--MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
M++ + M+K+ TS +Y +I A+S G + FE M EG+K +T+
Sbjct: 441 MSDMAAADAFLKMKKVGVKPTSQSYTALIHAYSVSGLHEKAYAAFENMQNEGIKPSIETY 500
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
L+N + +AG ++ +L ++ + +N ++ K ME V +
Sbjct: 501 TTLLNAFRHAGDAQTLMEIWKLMISEKVEGTGATFNILVDGFAKQGLFMEAREVISEFGK 560
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+P T++++ AYA+ G + K+ L +E
Sbjct: 561 VGLKPTVVTYNMLINAYARGGQHSKLPQLLKE 592
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 128/286 (44%), Gaps = 2/286 (0%)
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
+EM ++G+ + +Y L+ A+C+++ I+ A +MK +P TY+ L+ A
Sbjct: 344 SEMEKKGVSSSAIVYNTLMDAFCKSNHIEAAEGLFVEMKA-KGIKPIAATYNILMHAYSR 402
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM-LESATCKPDV 286
M+ +++E L ++M + + PN + ++ YGK M + + ++ KP
Sbjct: 403 RMQPKIVEKLLEEMQDVGLKPNATSYTCLIIAYGKQKNMSDMAAADAFLKMKKVGVKPTS 462
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
+ ++ ++ G + +E +N GI P T+ L+ A+ + + +
Sbjct: 463 QSYTALIHAYSVSGLHEKAYAAFENMQNEGIKPSIETYTTLLNAFRHAGDAQTLMEIWKL 522
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M + T +T+N +++ F+ G + G+K T+ LIN YA G
Sbjct: 523 MISEKVEGTGATFNILVDGFAKQGLFMEAREVISEFGKVGLKPTVVTYNMLINAYARGGQ 582
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
K+ ++ + L++ + Y+ +I A ++ D +K+M
Sbjct: 583 HSKLPQLLKEMAVLKLKPDSVTYSTMIFAFVRVRDFRRAFFYHKQM 628
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 134/309 (43%), Gaps = 12/309 (3%)
Query: 94 LKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVL 153
++ ++E+K + + + V T D K +A + + + +P TY L+
Sbjct: 342 IQSEMEKKGVSSSAI--VYNTLMDAFCKSNHIEAAEGLFVEMKAKGIKPIAATYNILMHA 399
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDE-----AFVTLNQMKTL 208
+ QP++ K+ EM + G++P YT L+ AY + + + AF+ + ++
Sbjct: 400 YSRRMQPKIVEKLLEEMQDVGLKPNATSYTCLIIAYGKQKNMSDMAAADAFLKMKKVGVK 459
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
P Q +Y+ LI A + E +++M + P+ T +L + AG
Sbjct: 460 PTSQ----SYTALIHAYSVSGLHEKAYAAFENMQNEGIKPSIETYTTLLNAFRHAGDAQT 515
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
+ + M+ S + T N ++ FA +G +F G+ P T+N+LI
Sbjct: 516 LMEIWKLMI-SEKVEGTGATFNILVDGFAKQGLFMEAREVISEFGKVGLKPTVVTYNMLI 574
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
AY + + K+ +++ M L+ S TY+ +I AF + D + + +QM G
Sbjct: 575 NAYARGGQHSKLPQLLKEMAVLKLKPDSVTYSTMIFAFVRVRDFRRAFFYHKQMIKSGQM 634
Query: 389 ADTKTFCCL 397
D ++ L
Sbjct: 635 MDGGSYQTL 643
>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
Length = 665
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 155/334 (46%), Gaps = 15/334 (4%)
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
++Y ++ Y R++ +D+A +M+ C+PD Y++LI A A ++ + +
Sbjct: 12 DIYGMMIRLYARHNQVDQARGLFFEMQEW-RCKPDADIYNSLIHAHSRAGQWRWAINIME 70
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
DM ++ P T N V+ G AG + + + M E+ PD+ T N +LS N
Sbjct: 71 DMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGV-GPDLVTHNIVLSALKNG 129
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR--KLQFPWTSS 357
Q ++E + + +T T NI+I K + + MR + + P
Sbjct: 130 AQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVV 189
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
TY +++ ++ G ++ + F+ M AEG+K + + L+ YA+ G+ + ++ L
Sbjct: 190 TYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLI 249
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
K + ++ Y ++++A ++ + V+ +MK+ C+P+ +++ + +AY GM
Sbjct: 250 KKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGML 309
Query: 478 DKVYAL--EQEK---------LQMLLEASGHWQQ 500
+ L E EK + LL A G +Q
Sbjct: 310 KEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQ 343
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 146/352 (41%), Gaps = 66/352 (18%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F ++K+ +P +Y LL G+S QPE AR+VFN+M + +P Y AL
Sbjct: 241 EALAIFNLIKKNGL-RPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNAL 299
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET--------- 236
+ AY ++ EA L++M+ QPDV + STL+ AC + IET
Sbjct: 300 IDAYGSAGMLKEAVGLLHEMEK-DGIQPDVVSISTLLAACGRCRQITRIETILEAARSRG 358
Query: 237 --------------------------LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
LY M E +V P+ VT NI++ G K G + +
Sbjct: 359 IDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESL 418
Query: 271 RVLSGMLES----------------------ATCKPDVWTMNTILSVFANKGQVDMMERW 308
R M++S + C PDV T T++ + G
Sbjct: 419 RFFEDMVDSKVSSTKEGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDL 478
Query: 309 YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD 368
+++ GI P+ + L+ A+ K +++ +ME+M+K P +Y +I + +
Sbjct: 479 FKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTM 538
Query: 369 MGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISS 413
+ D K E + + T ++N G LF+K+++S
Sbjct: 539 IRDWKTASEMIEYLDSSLSSISVGTLNHVLNFLGKCGKTENMMKLFYKMVTS 590
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 164/388 (42%), Gaps = 62/388 (15%)
Query: 109 NTVAETFS----DHVLKK--QWFQALQVFEMLKEQPFYQPKEG-TYMKLLVLLGKSGQPE 161
N ++TF+ H L K Q +A+++F ++E+ P + TY ++ GQ E
Sbjct: 146 NVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVE 205
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
+ +F+ MV EG++P Y +LL AY + EA N +K +PD+ +Y++L
Sbjct: 206 NCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKK-NGLRPDIVSYTSL 264
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
+ A YG++ ++ V + M + +
Sbjct: 265 LNA-----------------------------------YGRSAQPEKAREVFNKM-KKNS 288
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
CKP+ + N ++ + + G + + GI P+ + + L+ A G+ R ++
Sbjct: 289 CKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIE 348
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+++E R + YN+ I+++ GD + + M +K D T+ LI+G
Sbjct: 349 TILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGS 408
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI---KADDLMEMERVYKRMKEKHCR 458
+ G + E++ F+ ++ + + K L E E + MK+ C
Sbjct: 409 SKLGKY---------------TESLRFFEDMVDSKVSSTKEGKLSEAESTFSSMKKSGCF 453
Query: 459 PDSETFSIMTEAYAKEGMNDKVYALEQE 486
PD T++ + +AY G + + L +E
Sbjct: 454 PDVLTYTTLIQAYNAGGGWKRAWDLFKE 481
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 154/362 (42%), Gaps = 9/362 (2%)
Query: 118 HVLKKQWFQALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIE 176
H QW A+ + E ML+ P TY ++ G +G + A ++ +M E G+
Sbjct: 56 HSRAGQWRWAINIMEDMLRAA--IPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVG 113
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRF-ELIE 235
P + +L+A + +A MK N D +T + +I V + E IE
Sbjct: 114 PDLVTHNIVLSALKNGAQYSKAISYFEIMKG-ANVTSDTFTLNIIIHCLVKIGQCGEAIE 172
Query: 236 TLYQDMDERSVT--PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
L+ M ER P+ VT ++ Y G + + + M+ KP++ N++L
Sbjct: 173 -LFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGV-KPNIVAYNSLL 230
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
+A++G + + G+ P+ ++ L+ AYG+ +K V M+K
Sbjct: 231 GAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCK 290
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
+YN +I+A+ G K +M +G++ D + L+ ++ +
Sbjct: 291 PNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETI 350
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ A I N YN+ I + + D + +Y M+E + +PD+ T++I+ +K
Sbjct: 351 LEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSK 410
Query: 474 EG 475
G
Sbjct: 411 LG 412
>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
[Vitis vinifera]
Length = 644
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 124/280 (44%), Gaps = 6/280 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ V E+ P + + L G A KVF +M E G+ P YT +
Sbjct: 309 EAMDVLEVFN----LSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTM 364
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+A YC+ I A L +M +P V TY+ LI +C E+ E L+Q M
Sbjct: 365 MAGYCKVKDISNALKYLGKMLK-RGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEG 423
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+ V+ N ++ GYGK G + +LS M+ SA PD+ T N ++ +G V+
Sbjct: 424 LVPDVVSYNTLMNGYGKKGHLQKAFELLS-MMRSAGVSPDLVTYNILIHGLIKRGLVNEA 482
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ ++ G P+ TF +IG + K +++ + YM + T + ++
Sbjct: 483 KDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNG 542
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
+ F +M G+KAD + LI+G+ + G
Sbjct: 543 YCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLG 582
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 181/405 (44%), Gaps = 15/405 (3%)
Query: 84 YRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQ-ALQVFEMLKEQPFYQP 142
Y S N+ K+ + + TV + +K+ Q AL++ ++ + P
Sbjct: 126 YNSGEEGWHNIFLKIHETHTKRRVLETVYGMLVNCYVKENMTQVALKLICKMRHLNIF-P 184
Query: 143 KEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTL 202
G LL L +S Q LA EM +G+ + + ++ YC ID + L
Sbjct: 185 LIGVCNSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLL 244
Query: 203 NQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+MK L +PDV Y+ +I + C ++ E L++ M + V ++V+ + V+ GY
Sbjct: 245 MEMKYL-GIKPDVVAYTIVIDSLCKMSLLKEATSILFK-MTQMGVFLDSVSVSSVVDGYC 302
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G ++ VL E P+++ N+ +S G + + ++ G+ P+
Sbjct: 303 KVGKSEEAMDVL----EVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDC 358
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKL---QFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
++ ++ Y K + +S+ ++Y+ K+ + +TY +I++ G+ + EY
Sbjct: 359 FSYTTMMAGYCKVK---DISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYL 415
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
F++M EG+ D ++ L+NGY G K + + ++ ++ YN +I IK
Sbjct: 416 FQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIK 475
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ E + + + + PD TF+ + ++ +G ++ + L
Sbjct: 476 RGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLL 520
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 141/353 (39%), Gaps = 34/353 (9%)
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP-------- 209
G + K+ EM GI+P YT ++ + C+ SL+ EA L +M +
Sbjct: 235 GNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSV 294
Query: 210 -----------------------NCQPDVYTYSTLI-KACVDAMRFELIETLYQDMDERS 245
N P+++ +++ I K C D + + ++QDM E
Sbjct: 295 SSVVDGYCKVGKSEEAMDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAK-VFQDMCEMG 353
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+ + ++ GY K + L ML+ +P V T ++ G ++M
Sbjct: 354 LIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGI-RPSVATYTLLIDSCCKPGNMEMA 412
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E +++ G+ P+ ++N L+ YGKK K ++ MR TYN +I
Sbjct: 413 EYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHG 472
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
G + +++ G D TF +I G++N G F + S+ + +
Sbjct: 473 LIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPD 532
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
V +A+++ + + E ++ +M + + D ++ + + G D
Sbjct: 533 VVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNID 585
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 7/211 (3%)
Query: 65 KRLWKEGEYPGVS--ETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKK 122
+R+ EG P V T + GY K+ ++ + L A + V H L K
Sbjct: 417 QRMITEGLVPDVVSYNTLMNGY-GKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIK 475
Query: 123 QWF--QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+ +A + + L + F P T+ ++ G E A +F M E +EP
Sbjct: 476 RGLVNEAKDILDELTRRGF-SPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVV 534
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
+ALL YCR + EA V ++M + DV Y++LI + L
Sbjct: 535 TCSALLNGYCRTRCMAEANVLFHKMLD-AGLKADVILYNSLIHGFCSLGNIDDACHLVSM 593
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
M E + PN +T + ++ GY K + + +ER
Sbjct: 594 MIEHGIMPNNITHHALVLGYEKKCVENPVER 624
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 160/359 (44%), Gaps = 14/359 (3%)
Query: 125 FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
AL VF+ + + P TY LL K + A + +EM +G EP Y
Sbjct: 177 LDALAVFDDMLHRGC-SPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNV 235
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ A C + EA LN + + C+PD TY+ ++K+ + R+E + L M
Sbjct: 236 LINAMCSQGDVGEALKVLNSLPSY-GCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSN 294
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD- 303
P+ VT N V+ + G + +VL+ M E C PD+ T ++I+ + +VD
Sbjct: 295 DCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHG-CTPDIITYSSIMDGLCKERRVDE 353
Query: 304 ---MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+++ + + P+ TFN +I + +K ++D+ V++ M + +TYN
Sbjct: 354 AIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYN 413
Query: 361 NVIEAFSDMGDAKHMEYTFEQMH---AEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
+++ F + + E + ++ + G+ DT T+ L G + + I R
Sbjct: 414 CIVDGF--LCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRV 471
Query: 418 SKLQIAENVSFYNAV-ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ ++ + YNA+ + C K + ++ + M C PD T+ I+ E A EG
Sbjct: 472 QAMGLSPDKMLYNAILLGLCKKWRTDLAID-FFAYMVSNGCMPDESTYIILVEGIAYEG 529
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 133/321 (41%), Gaps = 40/321 (12%)
Query: 169 EMVEEGIEPTPEL--YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-C 225
E V E + P+ + Y ++ YCR ID A ++ + PD +TY+ LI+A C
Sbjct: 116 ERVVEALGPSATIITYNTMVNGYCRAGNIDAARRMIDSVPF----APDTFTYNPLIRALC 171
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
V + + ++ DM R +P+ VT +I+L K + Q +L M S C+PD
Sbjct: 172 VRGCVLDAL-AVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEM-RSKGCEPD 229
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
+ T N +++ ++G V + ++G P+ T+ ++ + +++ ++
Sbjct: 230 IVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLT 289
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
M T+N VI + G QM G D T+ +++G
Sbjct: 290 KMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKE- 348
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+V +++L +L +AE VS K+C PD TF+
Sbjct: 349 --RRVDEAIKLLKEL-LAEMVS---------------------------KNCIPDQVTFN 378
Query: 466 IMTEAYAKEGMNDKVYALEQE 486
+ + ++G+ D+ + E
Sbjct: 379 TIITSLCQKGLFDRAIKVVDE 399
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 106/241 (43%), Gaps = 10/241 (4%)
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYE 310
+T N ++ GY +AG D R M++S PD +T N ++ +G V ++
Sbjct: 129 ITYNTMVNGYCRAGNIDAARR----MIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFD 184
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
+ G P T++IL+ A K+ Y + +++ MR TYN +I A G
Sbjct: 185 DMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQG 244
Query: 371 DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL---QIAENVS 427
D + + G K D T+ ++ ++ + + + +L +K+ A +
Sbjct: 245 DVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEE---ADKLLTKMFSNDCAPDEV 301
Query: 428 FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEK 487
+NAVI++ + + +V +M E C PD T+S + + KE D+ L +E
Sbjct: 302 TFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKEL 361
Query: 488 L 488
L
Sbjct: 362 L 362
>gi|357117116|ref|XP_003560320.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Brachypodium distachyon]
Length = 598
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 143/324 (44%), Gaps = 11/324 (3%)
Query: 169 EMVEEGIEPTPEL----YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
+VEE ++P L YTALL +CR +DEA L +MK PDV ++TL+
Sbjct: 178 RLVEE-LQPRLPLSIRHYTALLYGWCRLGKLDEAKHVLARMKA-AGVAPDVVVFNTLLAG 235
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
V A RFE L ++M+ R PN V+ ++ G G G D++ RV M C P
Sbjct: 236 FVAADRFEDAFELAREMERRDCPPNAVSYTTLMQGLGSRGRVDEVMRVFVEMRRKG-CAP 294
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
D T T++S F G++ + + + + + A+ KK ++ +M
Sbjct: 295 DSVTYGTLVSAFCKAGRLSQGYEFLDAMSRDALRVDPGVYLGFFVAHEKKEQLEECLELM 354
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
E MR+ + P YN V+ +G+ K + +M G+ TF ++NG
Sbjct: 355 ERMRECRCPPDLGIYNVVLRLSCKLGETKQAMALWNEMENSGLSPGVDTFAIMVNGLVGQ 414
Query: 405 GLFHKVISSVR--LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
G S + + L +A +++A ++ + L + V+ + + C +
Sbjct: 415 GSLVDACSFFKDMVGRGLFVAPQYGVLKDLLNALVRDEKLELAKDVWGCIVSRGCELNVG 474
Query: 463 TFSIMTEA-YAKEGMNDKV-YALE 484
++I A YAK+ + D Y L+
Sbjct: 475 AWTIWIHALYAKKHVKDACSYCLD 498
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/197 (18%), Positives = 79/197 (40%)
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
+L + G++D + + + G+ P+ FN L+ + ++ + M +
Sbjct: 195 TALLYGWCRLGKLDEAKHVLARMKAAGVAPDVVVFNTLLAGFVAADRFEDAFELAREMER 254
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
P + +Y +++ G + F +M +G D+ T+ L++ + AG +
Sbjct: 255 RDCPPNAVSYTTLMQGLGSRGRVDEVMRVFVEMRRKGCAPDSVTYGTLVSAFCKAGRLSQ 314
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+ S+ + + Y A K + L E + +RM+E C PD ++++
Sbjct: 315 GYEFLDAMSRDALRVDPGVYLGFFVAHEKKEQLEECLELMERMRECRCPPDLGIYNVVLR 374
Query: 470 AYAKEGMNDKVYALEQE 486
K G + AL E
Sbjct: 375 LSCKLGETKQAMALWNE 391
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 80/216 (37%), Gaps = 44/216 (20%)
Query: 131 FEMLKEQPFYQ--PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAA 188
FE+ +E P +Y L+ LG G+ + +VF EM +G P Y L++A
Sbjct: 246 FELAREMERRDCPPNAVSYTTLMQGLGSRGRVDEVMRVFVEMRRKGCAPDSVTYGTLVSA 305
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP 248
+C+ + + + L+ M DA+R
Sbjct: 306 FCKAGRLSQGYEFLDAMSR-------------------DALR------------------ 328
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGM--LESATCKPDVWTMNTILSVFANKGQVDMME 306
V + LG + +Q+E L M + C PD+ N +L + G+
Sbjct: 329 --VDPGVYLGFFVAHEKKEQLEECLELMERMRECRCPPDLGIYNVVLRLSCKLGETKQAM 386
Query: 307 RWYEKFRNFGIDPETRTFNILI-GAYGKKRMYDKMS 341
+ + N G+ P TF I++ G G+ + D S
Sbjct: 387 ALWNEMENSGLSPGVDTFAIMVNGLVGQGSLVDACS 422
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 153/381 (40%), Gaps = 44/381 (11%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
++P T+ L++ ++ Q ++A+ +F++M G Y AL+ +C +DEA
Sbjct: 160 WRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEAL 219
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE-----------------------LI-- 234
+++ QPD+YT++ L+K DA R E L+
Sbjct: 220 ELFRELE-----QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDL 274
Query: 235 ----------ETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
E + +M + + P VT V+ Y + G RV M + C+P
Sbjct: 275 WCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESM-KLKGCEP 333
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
+VWT N ++ F N G+V ++ R G++P+ T+N+LI + ++
Sbjct: 334 NVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLL 393
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
M TYN +I+A G F+ + G++ ++ TF +ING
Sbjct: 394 RLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKG 453
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
G F + + A + Y+ I K E M +K +P + +
Sbjct: 454 GKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNY 513
Query: 465 SIMTEAYAKE---GMNDKVYA 482
+I+ + KE G+ +++
Sbjct: 514 TIVIDRLFKERNYGLATRIWG 534
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 151/356 (42%), Gaps = 9/356 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+ L + + +KE ++P Y L+ L + + E A K+ NEM + G+ P TA+
Sbjct: 248 EGLYMLQKMKELG-WRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAV 306
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ AYCR + A MK L C+P+V+TY+ +++ + + L M E
Sbjct: 307 VNAYCREGRMSGAVRVFESMK-LKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECG 365
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
V P+ VT N+++ G G + R+L ++E D +T N ++ G+VD
Sbjct: 366 VEPDVVTYNLLIRGQCIDGHIESAFRLLR-LMEGNGLAADQYTYNVLIDALCKTGKVDEA 424
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++ GI P + TFN +I K +D + +E M + TY+ IE
Sbjct: 425 CSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIEN 484
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY---ANAGLFHKVISSVRLASKLQI 422
++ ++M + +K T + +I+ N GL ++ + L
Sbjct: 485 LCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQM---VSLGC 541
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ +V Y + A L E E V MK+ D+ ++ + + + G D
Sbjct: 542 SPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTD 597
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/348 (18%), Positives = 141/348 (40%), Gaps = 26/348 (7%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY + L K+ +EM+++ ++P+ YT ++ + A
Sbjct: 473 PDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRI 532
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
QM +L C PDV TY+T ++A + R E + +M + + + + N ++ G+
Sbjct: 533 WGQMVSL-GCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHT 591
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTIL-----------------SVFANKGQVDM 304
G D +L M A+ P+ +T +L SV+ D+
Sbjct: 592 SIGKTDHAVTILKHMTGVAS-MPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADV 650
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
E +E + + R + ++ + ++R D+++S++ +M++ P Y +++
Sbjct: 651 FE-LFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVN 709
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
F + M G + ++ L++G+ G + R +
Sbjct: 710 CFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNT 769
Query: 425 NVSFYNAVISACIK---ADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+ + +I I+ D +M + ++MK C+P ET++++TE
Sbjct: 770 DEIVWKIIIDGLIRQGHPDMCHDMISILEQMK---CKPSDETYAMLTE 814
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 145/335 (43%), Gaps = 2/335 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY ++ + +SG LA + +M E ++ Y+ ++ + CR+ ID A
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M+T + V TY++L++ A ++ L +DM R + PN +T N++L +
Sbjct: 250 LFKEMET-KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + + M+ P++ T NT++ + + ++ + P+
Sbjct: 309 VKEGKLQEANELYKEMITRGI-SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
TF LI Y + D V + K + TY+ +++ F G K E F+
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M + G+ D T+ L++G + G K + K ++ + Y +I K
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + ++ + K +P+ T+++M K+G
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 522
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/416 (20%), Positives = 163/416 (39%), Gaps = 66/416 (15%)
Query: 54 SFSSESAVAAKKRLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAE 113
S + + A L+KE E G+ ++S+ Y S ++ L KA W N A
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGI-KSSVVTYNS---LVRGL-------CKAGKW-NDGAL 284
Query: 114 TFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE 173
D V ++ P T+ LL + K G+ + A +++ EM+
Sbjct: 285 LLKDMVSRE-----------------IVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
GI P Y L+ YC + + EA L+ M C PD+ T+++LIK R +
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLM-VRNKCSPDIVTFTSLIKGYCMVKRVDD 386
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
+++++ +R + N VT +I++ G
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQG---------------------------------- 412
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
F G++ + E +++ + G+ P+ T+ IL+ +K + E ++K +
Sbjct: 413 --FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
Y +IE G + F + +G+K + T+ +I+G G +
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+R + A N YN +I A ++ DL ++ + MK D+ + ++ +
Sbjct: 531 LRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 153/354 (43%), Gaps = 11/354 (3%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
A+ +F EM++ +P P + + + ++ Q L ++ GI
Sbjct: 71 DAIALFQEMIRSRPL--PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 128
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
++ +CR A+ L ++ L +PD T++TLIK + L M E
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGY-EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
P+ VT N ++ G ++G +L M E K DV+T +TI+ G +D
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKM-EERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+++ GI T+N L+ K ++ + +++ M + T+N +++
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
F G + +++M G+ + T+ L++GY + + + L + + +
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 425 NVSFYNAVISA-CI--KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++ + ++I C+ + DD M +V++ + ++ ++ T+SI+ + + + G
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGM---KVFRNISKRGLVANAVTYSILVQGFCQSG 417
>gi|359490014|ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Vitis vinifera]
Length = 494
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 145/331 (43%), Gaps = 2/331 (0%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
+ G ELA KV EM GI Y AL+ Y R +++ + + +M + PD
Sbjct: 105 RKGLLELADKVLAEMDALGIGRNRATYEALVDYYGRAGRLNDVWAVIGEM-SRDGFGPDS 163
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
+ YS +I D ++ + +++ E V+ + N ++ +GK G + V
Sbjct: 164 FVYSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSEALEVFEK 223
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
M E KPD+ T N+++ G V + K + G+ P+ + F +I G++
Sbjct: 224 MQEEGV-KPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEGLYPDPKIFITIISRLGEQG 282
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
+D + E M+ + + Y +++ + G + E + +EG++ FC
Sbjct: 283 KWDVIKRNFENMKCRGHQRSGAIYAILVDIYGQYGRFQGPEECISALKSEGIQPSASMFC 342
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
L N YA GL + + ++L I N+ N +I+A A +E VY +K+
Sbjct: 343 VLANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLNMLINAFGIAGRHLEALSVYHHIKDT 402
Query: 456 HCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
PD T+S + +A + DKV + +E
Sbjct: 403 GISPDVVTYSTLMKACIRARKFDKVPEIYEE 433
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 149/325 (45%), Gaps = 12/325 (3%)
Query: 172 EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRF 231
E G E + +Y A + CR +D+A L QM+ L + +Y+T+I+A R
Sbjct: 16 ENGEELSGVVYNARIRESCRVGDVDKAMKLLAQMEAL-GFSLSLGSYTTVIEALGSVGRT 74
Query: 232 ELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNT 291
E ++++M + + N++L + G+ + ++VL+ M ++ + T
Sbjct: 75 LEAEAIFREMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEM-DALGIGRNRATYEA 133
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
++ + G+++ + + G P++ ++ +IG Y M+ K ++ +R++
Sbjct: 134 LVDYYGRAGRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMG 193
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
YN++I+ F G+ FE+M EG+K D T+ LI + AG V
Sbjct: 194 VSLDKRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAG---DVG 250
Query: 412 SSVRLASKLQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
++ L SK+Q + + + +IS + ++R ++ MK + + ++I+
Sbjct: 251 KALELFSKMQEEGLYPDPKIFITIISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYAILV 310
Query: 469 EAYAK----EGMNDKVYALEQEKLQ 489
+ Y + +G + + AL+ E +Q
Sbjct: 311 DIYGQYGRFQGPEECISALKSEGIQ 335
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 112/239 (46%), Gaps = 6/239 (2%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
N++ +TF + +AL+VFE ++E+ +P T+ L+ K+G A ++F+
Sbjct: 202 NSIIDTFGKC---GELSEALEVFEKMQEEGV-KPDIMTWNSLIQWHCKAGDVGKALELFS 257
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
+M EEG+ P P+++ +++ D MK + Q Y+ L+
Sbjct: 258 KMQEEGLYPDPKIFITIISRLGEQGKWDVIKRNFENMKCRGH-QRSGAIYAILVDIYGQY 316
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
RF+ E + + P+ ++ Y + G+ +Q +VL ++E+ +P++
Sbjct: 317 GRFQGPEECISALKSEGIQPSASMFCVLANAYAQQGLCEQTVKVLQ-LMETEGIEPNLIM 375
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
+N +++ F G+ Y ++ GI P+ T++ L+ A + R +DK+ + E M
Sbjct: 376 LNMLINAFGIAGRHLEALSVYHHIKDTGISPDVVTYSTLMKACIRARKFDKVPEIYEEM 434
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 71/146 (48%), Gaps = 2/146 (1%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+Q Y L+ + G+ G+ + + + + EGI+P+ ++ L AY + L ++
Sbjct: 299 HQRSGAIYAILVDIYGQYGRFQGPEECISALKSEGIQPSASMFCVLANAYAQQGLCEQTV 358
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L M+T +P++ + LI A A R ++Y + + ++P+ VT + ++
Sbjct: 359 KVLQLMET-EGIEPNLIMLNMLINAFGIAGRHLEALSVYHHIKDTGISPDVVTYSTLMKA 417
Query: 260 YGKAGMFDQMERVLSGMLESATCKPD 285
+A FD++ + M ESA C PD
Sbjct: 418 CIRARKFDKVPEIYEEM-ESAGCTPD 442
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 61/153 (39%)
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
DK ++ M L F + +Y VIEA +G E F +M G+K D + + +
Sbjct: 40 DKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFREMVHLGLKLDLRVYNVM 99
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
+ GL + L I N + Y A++ +A L ++ V M
Sbjct: 100 LRSCLRKGLLELADKVLAEMDALGIGRNRATYEALVDYYGRAGRLNDVWAVIGEMSRDGF 159
Query: 458 RPDSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
PDS +S + Y GM K + +E +M
Sbjct: 160 GPDSFVYSKVIGVYRDNGMWKKAMEIVREIREM 192
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 151/346 (43%), Gaps = 10/346 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ K G + A +V + M + + P Y L+ C++ IDEAF
Sbjct: 280 PNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRL 339
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMR----FELIETLYQDMDERSVTPNTVTQNIVL 257
++M+ L PDV TY+TLI C D FELI+ M+ + V PN VT N+V+
Sbjct: 340 KDEMENLK-LLPDVVTYNTLINGCFDCSSSLKGFELIDK----MEGKGVKPNAVTYNVVV 394
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
Y K G D L M ES PD T NT+++ + G++ R ++ G+
Sbjct: 395 KWYVKEGKMDNAGNELRKMEESGF-SPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGL 453
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
+ T N ++ +R D ++ K + +Y +I + G +
Sbjct: 454 KMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMK 513
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
+++M + + T+ +I G ++G + I + + + + + YN +I
Sbjct: 514 LWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYC 573
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ + + + + +M +K +PD T +I+ EGM DK L
Sbjct: 574 REGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKL 619
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 147/369 (39%), Gaps = 41/369 (11%)
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
L++ +F+++++ G++ + L+ C + + EA + +MK +C PD +Y+T+
Sbjct: 195 LSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDF-SCFPDNVSYNTI 253
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
+ + L DM + PN T NI++ GY K G + +V+ M ++
Sbjct: 254 LDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNV 313
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
PDVWT N ++ G++D R ++ N + P+ T+N LI K
Sbjct: 314 L-PDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGF 372
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+++ M + TYN V++ + G + +M G D TF LINGY
Sbjct: 373 ELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGY 432
Query: 402 ANAG--------------------------LFHKVISSVRLASKLQIAENVS-------- 427
AG + H + +L ++ + S
Sbjct: 433 CKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDE 492
Query: 428 -FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
Y +I K +E +++ MKEK P T++ M G D+ +
Sbjct: 493 VSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSI----D 548
Query: 487 KLQMLLEAS 495
KL LLE+
Sbjct: 549 KLNELLESG 557
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 133/326 (40%), Gaps = 49/326 (15%)
Query: 136 EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI 195
E+ + P T+ L+ K+G+ A ++ +EM +G++ +L C +
Sbjct: 414 EESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKL 473
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIKA------CVDAMRFELIETLYQDMDERSVTPN 249
D+A+ L+ +V +Y TLI V+AM+ L+ +M E+ + P+
Sbjct: 474 DDAYKLLSSASKRGYFVDEV-SYGTLIMGYFKDGKSVEAMK------LWDEMKEKEIIPS 526
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
+T N ++GG +G DQ L+ +LES PD T NTI+ + +GQV+ +++
Sbjct: 527 IITYNTMIGGLCHSGKTDQSIDKLNELLESGLV-PDETTYNTIILGYCREGQVEKAFQFH 585
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
K P+ T NIL+ + M DK KL W S
Sbjct: 586 NKMVKKSFKPDLFTCNILLRGLCTEGMLDKA-------LKLFNTWIS------------- 625
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFY 429
+G D T+ +I+G F + + + ++ + Y
Sbjct: 626 ---------------KGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTY 670
Query: 430 NAVISACIKADDLMEMERVYKRMKEK 455
NA++SA A + E E R+ E+
Sbjct: 671 NAILSALADAGRMKEAEEFMSRIVEQ 696
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E TY +++ + GQ E A + N+MV++ +P LL C ++D+A
Sbjct: 560 PDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKL 619
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
N + D TY+T+I RFE L +M+E+ + P+ T N +L
Sbjct: 620 FNTWISKGK-AIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALA 678
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMN 290
AG + E +S ++E + ++N
Sbjct: 679 DAGRMKEAEEFMSRIVEQGKLQDQTISLN 707
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 138/319 (43%), Gaps = 47/319 (14%)
Query: 96 KKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLL 154
K++ERK + V T + +W A ++ +M+K++ P TY LL
Sbjct: 214 KEIERKG-IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK--ITPNVITYSALLDAF 270
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL---PNC 211
K+G+ A+++F EMV I+P Y++L+ C + IDEA NQM L C
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEA----NQMFDLMVSKGC 326
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
DV +Y+TLI A R E L+++M +R + NTVT N ++ G+ +A
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA-------- 378
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
G VD + ++ + FGI P+ T+NIL+G
Sbjct: 379 ----------------------------GDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
+K + E M+K + TY VI G + F + +G+K D
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 470
Query: 392 KTFCCLINGYANAGLFHKV 410
T+ +++G GL H+V
Sbjct: 471 VTYTTMMSGLCTKGLLHEV 489
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 157/345 (45%), Gaps = 4/345 (1%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y+P T L+ + + A + ++MVE G +P Y A++ + C+ +++AF
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+++ +P+V TY+ L+ ++ R+ L DM ++ +TPN +T + +L
Sbjct: 211 DFFKEIER-KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 269
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ K G + + + M+ + PD+ T +++++ ++D + ++ + G
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSI-DPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLA 328
Query: 320 ETRTFNILIGAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
+ ++N LI + K KR+ D M E M + + TYN +I+ F GD +
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFRE-MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
F QM G+ D T+ L+ G + G K + K ++ ++ Y VI K
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ E ++ + K +PD T++ M +G+ +V AL
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 492
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 144/337 (42%), Gaps = 39/337 (11%)
Query: 159 QPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTY 218
Q LA + +M++ G EP +L+ +CR + + +A +++M + +PD+ Y
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY-KPDIVAY 193
Query: 219 STLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
+ +I + R +++++ + + PN VT ++ G + + R+LS M++
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
P+V T + +L F G+V + +E+ IDP+ T++ L+ ++D
Sbjct: 254 KKI-TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLC---LHD 309
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
++ +A M F+ M ++G AD ++ LI
Sbjct: 310 RID-----------------------------EANQM---FDLMVSKGCLADVVSYNTLI 337
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
NG+ A + R S+ + N YN +I +A D+ + + + +M
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
Query: 459 PDSETFSIMTEAYAKEGMNDKVYAL--EQEKLQMLLE 493
PD T++I+ G +K + + +K +M L+
Sbjct: 398 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 434
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 139/316 (43%), Gaps = 6/316 (1%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPN--CQPDVYTYST 220
A K+ +EM ++G P Y ++ C+ +D+A + +K LP+ C+P+ +Y+
Sbjct: 11 AMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDA---IEFLKNLPSYGCEPNTVSYNI 67
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
++K A R+E E L +M ++ PN VT N+++ + G+ + VL +
Sbjct: 68 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLE-QIPKY 126
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
C P+ + N +L F + ++D + + + G P+ ++N L+ A + D
Sbjct: 127 GCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVA 186
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
++ ++ +YN VI+ + G K +M ++G++ D T+ + G
Sbjct: 187 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAG 246
Query: 401 YANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
I + + I N YNA+I K + ++ M C P+
Sbjct: 247 LCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPN 306
Query: 461 SETFSIMTEAYAKEGM 476
T++I+ E A EG+
Sbjct: 307 ESTYTILIEGLAYEGL 322
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 114/246 (46%), Gaps = 2/246 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ L + G E A +V ++ + G P Y LL A+C+ +D+A
Sbjct: 95 PNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAF 154
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L+ M + C PD+ +Y+TL+ A + ++ L + ++ P ++ N V+ G
Sbjct: 155 LDLMVS-RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLT 213
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
KAG + +L+ M+ S +PD+ T +TI + + +++ R + K ++ GI P T
Sbjct: 214 KAGKTKEALELLNEMV-SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNT 272
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+N +I K+R + YM STY +IE + G K ++
Sbjct: 273 VLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDE 332
Query: 382 MHAEGM 387
+ + G+
Sbjct: 333 LCSRGV 338
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/221 (18%), Positives = 96/221 (43%), Gaps = 1/221 (0%)
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+ Q ++L M + C PD+ T N +++ +G+VD + + ++G +P T ++N
Sbjct: 8 YKQAMKLLDEMRDKG-CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYN 66
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
I++ ++ +M M + P T+N +I G + EQ+
Sbjct: 67 IVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKY 126
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G ++ ++ L++ + K ++ + L ++ YN +++A ++ ++
Sbjct: 127 GCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVA 186
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
+ ++K+K C P +++ + + K G + L E
Sbjct: 187 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNE 227
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 78/180 (43%), Gaps = 12/180 (6%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A+++ LK++ P +Y ++ L K+G+ + A ++ NEMV +G++P Y+ +
Sbjct: 186 AVELLHQLKDKGC-APVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIA 244
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
A CR I++A +++ + +P+ Y+ +I L+ M
Sbjct: 245 AGLCREDRIEDAIRAFGKVQDM-GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGC 303
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PN T I++ G G+ + +L ++ + + NKG + +++
Sbjct: 304 MPNESTYTILIEGLAYEGLIKEARDLLD----------ELCSRGVVRKSLINKGAIRLLD 353
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 148/321 (46%), Gaps = 24/321 (7%)
Query: 166 VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC 225
V NEMV+ G++P YT ++ A+C+ + A L +M ++ C P+V T++ L+K
Sbjct: 244 VVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSM-GCTPNVLTFTALVKGF 302
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY-------GKAGMFDQMERVLSGMLE 278
+ + +++ M + P+T++ N+++ G G F+ M+R + +L
Sbjct: 303 FEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKR--NALLP 360
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
+AT T +T++ F+N G +D + + ++ G P + +I KK M+D
Sbjct: 361 NAT------TYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFD 414
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+ S+++ M P + T+N +I D G F M G + +T+ L+
Sbjct: 415 QAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELL 474
Query: 399 NGYANAG----LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
+G G F VI + +L + + N + C++ ++ + RM
Sbjct: 475 HGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAML----LLGRMMV 530
Query: 455 KHCRPDSETFSIMTEAYAKEG 475
+ +PD+ TF+ + AY KEG
Sbjct: 531 QGIQPDAFTFNAIIHAYCKEG 551
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 139/334 (41%), Gaps = 12/334 (3%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ + G+ A +++ MV+EG P+ Y L+ C + A
Sbjct: 290 PNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDF 349
Query: 202 LNQMK---TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
N MK LPN TYSTL+ +A + ++ +M PN V ++
Sbjct: 350 FNSMKRNALLPN----ATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMID 405
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
K MFDQ E ++ ML C P+ T NT++ + G+V + R G
Sbjct: 406 VLCKKMMFDQAESLIDKMLMD-NCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCH 464
Query: 319 PETRTFN-ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P RT+N +L G + + D + V+E + F + TYN VI M KH
Sbjct: 465 PNDRTYNELLHGLFREGNHKDAFAMVIEMLNN-GFELSLVTYNTVINCLCQMCMRKHAML 523
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVIS-AC 436
+M +G++ D TF +I+ Y G + + + NV Y +IS C
Sbjct: 524 LLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELC 583
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
+ M + K + E C P+ T++++ A
Sbjct: 584 NQGKLSNAMVYLLKMLYEGIC-PNEATWNVLVRA 616
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 155/401 (38%), Gaps = 34/401 (8%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL+ F + P Y LL L + V++ M + G++P Y L
Sbjct: 104 RALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLL 163
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE-----LIETL--- 237
+ A C+N +D A L++M + C PD ++ T++ R E L ET+
Sbjct: 164 IRALCQNDRVDAARKMLDEM-SRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQ 222
Query: 238 ----------------------YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
+M +R + PN VT ++ + KA +L+
Sbjct: 223 ASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILAR 282
Query: 276 MLESATCKPDVWTMNTILSVFANKGQV-DMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
M+ S C P+V T ++ F G+V D + W+ + G P T ++N+LI
Sbjct: 283 MV-SMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMV-DEGWAPSTISYNVLIRGLCCI 340
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
M++ ++TY+ +++ FS+ GD + +M + G K + +
Sbjct: 341 GDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVY 400
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
+I+ +F + S + N +N +I + V+ M+
Sbjct: 401 TNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRR 460
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
C P+ T++ + +EG + +A+ E L E S
Sbjct: 461 NGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELS 501
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 98/254 (38%), Gaps = 18/254 (7%)
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
VD +++ L Q+M R V +G + +AG D+ + + P
Sbjct: 67 VDGVQYAL-----QEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPG 121
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
V N +L + V + Y+ R G+DP T+N+LI A + D +++
Sbjct: 122 VRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLD 181
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA- 404
M + ++ ++ +G + A G A+T N +A
Sbjct: 182 EMSRKGCHPDEVSHGTIVSGMCKLGRVE---------EARGFLAETVPVQASYNAVVHAL 232
Query: 405 -GLFH--KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
G F +V S V + + NV Y ++ A KA +L + RM C P+
Sbjct: 233 CGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNV 292
Query: 462 ETFSIMTEAYAKEG 475
TF+ + + + ++G
Sbjct: 293 LTFTALVKGFFEDG 306
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 4/178 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL VF ++ + P + TY +LL L + G + A + EM+ G E + Y +
Sbjct: 450 RALNVFHGMRRNGCH-PNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTV 508
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ + A + L +M + QPD +T++ +I A + + L M+ +
Sbjct: 509 INCLCQMCMRKHAMLLLGRM-MVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVN 567
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL-SVFANKGQV 302
N V I++ G L ML C P+ T N ++ ++F N G +
Sbjct: 568 CPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGIC-PNEATWNVLVRAIFTNIGTI 624
>gi|302819136|ref|XP_002991239.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
gi|300140950|gb|EFJ07667.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
Length = 561
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 156/372 (41%), Gaps = 11/372 (2%)
Query: 110 TVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNE 169
+V T + + W ++ E L EQ +Y + Y +L+ K GQ + +F
Sbjct: 120 SVVGTLTRFKQMQAWKIIIKFTEWLMEQGWYNFNQKDYFLVLLAYCKDGQVDKTEGIFQR 179
Query: 170 MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM 229
M E G+ E+YT + Y R D+A ++ T P TY T++K+ +A
Sbjct: 180 MAELGVVANIEMYTLQIEGYGRRRSFDKAEAVFQRLLTT-GPSPTAQTYQTMMKSYSEAG 238
Query: 230 RFELIETLYQ---DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
R + ++ +++ D +V P+ N+++ YGK G +Q V M
Sbjct: 239 RLDDVQRIFKLVTDSPSPTVKPDARMYNLMIHTYGKQGKVEQAMSVYQSMKRERV----A 294
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
T+ T S+ A + E + K + +DP+ ++ L+ AY K R + + +
Sbjct: 295 LTIVTFNSLLACQKTWKDAEDVFRKLQAAKLDPDVFSYTALVNAYAKARRAECAHAAFDD 354
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M T YN +I A++ D + +QM G +++ LI+ Y + L
Sbjct: 355 MIAAGIRPTQVAYNALINAYAKCKDPEGARAVLKQMKQNGCTPTVESYTSLISAYVSVNL 414
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
K +V + + N+ + +++ + L M R ++ MK P+ +++
Sbjct: 415 MAKAEQTVLRMKEADLQPNLQTFCVLMTGYANGNKLDNMMRSFETMKLAGLEPNRHVYTV 474
Query: 467 MTEAYAKEGMND 478
+ AY G ND
Sbjct: 475 LVNAY---GSND 483
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 2/163 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P + Y L+ K PE AR V +M + G PT E YT+L++AY +L+ +A
Sbjct: 361 RPTQVAYNALINAYAKCKDPEGARAVLKQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQ 420
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
T+ +MK + QP++ T+ L+ + + + + ++ M + PN +++ Y
Sbjct: 421 TVLRMKE-ADLQPNLQTFCVLMTGYANGNKLDNMMRSFETMKLAGLEPNRHVYTVLVNAY 479
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
G FD ML + KPD +L + + Q +
Sbjct: 480 GSNDDFDSAIIWYKQMLGTGY-KPDPILRTVLLKIAKSHEQTE 521
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 158/380 (41%), Gaps = 42/380 (11%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ + +PELA VF ++ G+ P Y L+ + + +D+A+
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+M + PDV TY++LI E + + M + + PN T N ++ GY
Sbjct: 180 FYKMIE-QSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYS 238
Query: 262 KAGMFDQMERVLSGMLES--------------ATC--------------------KPDVW 287
AGM+ + RV M S A C KP++
Sbjct: 239 TAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNII 298
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
+ +T+L +A +G M + GI P R FNILI AY + M DK + E M
Sbjct: 299 SYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDM 358
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
+ + T+ VI + +G + F M G+ + CLI G N G
Sbjct: 359 QNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHG-- 416
Query: 408 HKVISSVRLASKLQIAE----NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
+++ + L S++ + V +++++I+ K + E + + M + RP+ T
Sbjct: 417 -ELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVT 475
Query: 464 FSIMTEAYAKEGMNDKVYAL 483
F+ + E Y G ++ +AL
Sbjct: 476 FNSLMEGYCLVGNMEEAFAL 495
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/422 (21%), Positives = 167/422 (39%), Gaps = 23/422 (5%)
Query: 58 ESAVAAKKRLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSD 117
E A+A RL + G P V S T I K+ E + + + ++ S
Sbjct: 139 ELALAVFGRLLRTGLGPDVC--------SYNTLIDGFSKEGEVDKAYELFYKMIEQSVSP 190
Query: 118 HVLK-----------KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKV 166
V+ K+ ++ +V E + + +P TY L+ +G + + +V
Sbjct: 191 DVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGI-RPNNKTYNSLIYGYSTAGMWKESVRV 249
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
F EM G+ P + + A CR++ I EA + M L +P++ +YSTL+
Sbjct: 250 FKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSM-VLKGPKPNIISYSTLLHGYA 308
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
F + +L M + + PN NI++ Y + GM D+ + M ++ PD
Sbjct: 309 AEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDM-QNKGMIPDT 367
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI-GAYGKKRMYDKMSSVME 345
T T++S G++D + + G+ P + LI G + + E
Sbjct: 368 VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISE 427
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
M K P ++++I G + + M G + + TF L+ GY G
Sbjct: 428 MMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVG 487
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ + + + + I N Y ++ K + + V++ M K +P S ++
Sbjct: 488 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYN 547
Query: 466 IM 467
I+
Sbjct: 548 II 549
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 142/342 (41%), Gaps = 6/342 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ +FE ++ + P T+ ++ L + G+ + A FN MV+ G+ P+ +Y L
Sbjct: 350 KAMLIFEDMQNKGMI-PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCL 408
Query: 186 LAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
+ C + + +A +++M K +P P V +S++I R + + M +
Sbjct: 409 IQGCCNHGELVKAKELISEMMNKDIP--PPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQ 466
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
PN VT N ++ GY G ++ +L M S +P+ + T++ + G++D
Sbjct: 467 TGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAM-ASIGIEPNCYIYGTLVDGYCKNGRID 525
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ + G+ P + +NI++ + R + M + + TY V+
Sbjct: 526 DALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVL 585
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
E++ A +K D TF +I+ G + S +
Sbjct: 586 GGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLV 645
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
V YN +IS IK + E + ++ +++ PDS +
Sbjct: 646 PTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLN 687
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 94/223 (42%), Gaps = 2/223 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P T+ L+ G E A + + M GIEP +Y L+ YC+N ID+A
Sbjct: 470 RPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALT 529
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
M +P Y+ ++ A R + ++ +M E T + T +VLGG
Sbjct: 530 VFRDMLH-KGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGL 588
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ D+ +L + + K D+ T N ++S G+ + + +G+ P
Sbjct: 589 CRNNCTDEANMLLEKLF-AMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPT 647
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
T+N++I K+ Y++ ++ + K S N+++
Sbjct: 648 VHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIV 690
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/338 (19%), Positives = 131/338 (38%), Gaps = 11/338 (3%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P + L+ + G + A +F +M +G+ P + ++++ CR +D+A
Sbjct: 330 PNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK 389
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQ-NIVLGGY 260
N M + P Y LI+ C + + L +M + + P V + ++
Sbjct: 390 FNHMVDI-GVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNL 448
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + + ++ M+++ +P+V T N+++ + G ++ + + GI+P
Sbjct: 449 FKEGRVAEGKDIMDLMVQTGQ-RPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 507
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+ L+ Y K D +V M TS YN ++ + F
Sbjct: 508 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFH 567
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSF----YNAVISAC 436
+M G +T+ ++ G + + + A NV F +N VISA
Sbjct: 568 EMIESGTTVSIQTYGVVLGGLCR----NNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 623
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
+K E + ++ + P T+++M KE
Sbjct: 624 LKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKE 661
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 102/219 (46%), Gaps = 8/219 (3%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
AL VF +ML + +P Y +L L ++ + A+K+F+EM+E G + + Y
Sbjct: 526 DALTVFRDMLHKG--VKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGV 583
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
+L CRN+ DEA + L ++ + N + D+ T++ +I A + R + + L+ +
Sbjct: 584 VLGGLCRNNCTDEANMLLEKLFAM-NVKFDIITFNIVISAMLKVGRRQEAKELFAAISTY 642
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ P T N+++ K +++ + + + +S PD +N I+ + K +V
Sbjct: 643 GLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGR-APDSRLLNHIVRMLLKKAEVAK 701
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAY---GKKRMYDKM 340
+ + E T ++L + GK R + K+
Sbjct: 702 ASNYLSIIDENNLTLEASTISLLASLFSREGKCREHIKL 740
>gi|357509511|ref|XP_003625044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500059|gb|AES81262.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 521
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 159/350 (45%), Gaps = 32/350 (9%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY--CRNS--LIDEAFVT 201
T+ LL +L K+ + A+ +F+++ I L+ +LL +Y C +S + D F T
Sbjct: 104 THSFLLHILTKNRNFKTAQSIFSKI----ITTNSNLFESLLHSYTLCNSSPLVFDTLFKT 159
Query: 202 LNQMKTLPNCQ------------PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
M L N P V + + + + + R EL+ + Y+ M ++PN
Sbjct: 160 FAHMNKLRNATDTFVKMKEYGFFPTVESCNAFLSSMLYLKRPELVVSFYRQMRRNRISPN 219
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
T N+V+ Y K G ++ VL M + C P+V T N+++S + +KG + + +
Sbjct: 220 VYTINMVVSAYCKLGELNKASEVLEKMKDMGLC-PNVVTFNSLISGYCDKGLLGLALKVR 278
Query: 310 EKF--RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS 367
+ +N G+ P TFN LI + K+ + + V M+ TYN +I F
Sbjct: 279 DLMMGKN-GVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFG 337
Query: 368 DMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVS 427
G+++ FE+M +KAD T+ LI G G K V+ K + N S
Sbjct: 338 QAGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNAS 397
Query: 428 FYNAVISA-CIKADDLMEMER---VYKRMKEKHCRPDSETFSIMTEAYAK 473
++A+I+ C++ + ER VY+ M P+ TF ++ A+ K
Sbjct: 398 TFSALIAGQCVRNNS----ERAFLVYRSMVRSGFSPNENTFRMLASAFCK 443
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 129/312 (41%), Gaps = 8/312 (2%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAA--YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYST 220
A F +M E G PT E A L++ Y + E V+ + P+VYT +
Sbjct: 169 ATDTFVKMKEYGFFPTVESCNAFLSSMLYLKRP---ELVVSFYRQMRRNRISPNVYTINM 225
Query: 221 LIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA 280
++ A + + M + + PN VT N ++ GY G+ +V M+
Sbjct: 226 VVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLGLALKVRDLMMGKN 285
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
P+V T NT+++ F +G++ R + + + + P T+N LI +G+ +
Sbjct: 286 GVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMG 345
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
+ E M + + TYN +I G K Y +++ + + TF LI G
Sbjct: 346 IGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAG 405
Query: 401 YANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
+ R + + N + + + SA K +D +V + M E+ PD
Sbjct: 406 QCVRNNSERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERFMTPD 465
Query: 461 SETFSIMTEAYA 472
S SI++E Y+
Sbjct: 466 S---SILSEVYS 474
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 2/160 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ G++G E+ +F EM ++ Y L+ C+ +A
Sbjct: 324 PNVVTYNTLINGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYM 383
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ ++ N P+ T+S LI E +Y+ M +PN T ++ +
Sbjct: 384 VKELDK-GNLVPNASTFSALIAGQCVRNNSERAFLVYRSMVRSGFSPNENTFRMLASAFC 442
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
K FD +VL MLE PD ++ + S G+
Sbjct: 443 KNEDFDGAVQVLRDMLERFM-TPDSSILSEVYSGLCRCGR 481
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 147/343 (42%), Gaps = 14/343 (4%)
Query: 148 MKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKT 207
M+ LV LG+ A+ VF+EM G+ T + +++ CR +D A TL++ +
Sbjct: 247 MRDLVRLGELAS---AQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGA-ETLHRRMS 302
Query: 208 LPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFD 267
PDVYTY LI+ R E +++ M R + PN V I++ + K G +
Sbjct: 303 EAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAE 362
Query: 268 QMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
M + M E +PD T N I++ + + R+ G+ P+T T+ L
Sbjct: 363 TMLELHREMRERGV-RPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTL 421
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
I Y K+ D + + M TY +I S G + E +M G+
Sbjct: 422 IDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGL 481
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDLME 444
+ D T+ +I+ + G V + +RL ++Q V YN +++ K +
Sbjct: 482 EPDNTTYTMVIDAFCRKG---DVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKN 538
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEK 487
+ + M PD T++I+ + + K G KV +E+ K
Sbjct: 539 ADMLLNAMINIGVSPDDITYNILLDGHCKHG---KVTDIEELK 578
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 121/270 (44%), Gaps = 15/270 (5%)
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
P+ ++ L++ V + ++ +M R V V+ N ++ G +AG D E +
Sbjct: 238 PEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETL 297
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
M E+ PDV+T ++ G+++ +EK G+ P F ILI A+
Sbjct: 298 HRRMSEAGV-TPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHC 356
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
KK + M + MR+ + TYN ++ D K +M + G++ DT
Sbjct: 357 KKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTV 416
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSF----YNAVISACIKADDLMEM 445
T+ LI+GY + +A +++ +AE V Y A+IS KA +
Sbjct: 417 TYTTLIDGYCKE-------EELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADA 469
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
ERV M E PD+ T++++ +A+ ++G
Sbjct: 470 ERVLGEMMEAGLEPDNTTYTMVIDAFCRKG 499
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 103/244 (42%), Gaps = 5/244 (2%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
K G E ++ EM E G+ P Y A++ CR + A + +M++ +PD
Sbjct: 357 KKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRS-AGLRPDT 415
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
TY+TLI ++ + Q+M V + VT ++ G KAG ERVL
Sbjct: 416 VTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGE 475
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
M+E A +PD T ++ F KG V R ++ +N G P T+N+++ + K
Sbjct: 476 MME-AGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLG 534
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
++ M + TYN +++ G +E E A+G D +
Sbjct: 535 QMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIE---ELKSAKGTVPDLGVYT 591
Query: 396 CLIN 399
++
Sbjct: 592 SIVG 595
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 102/239 (42%), Gaps = 5/239 (2%)
Query: 95 KKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLL 154
+K R K A V T+ H K L++ ++E+ +P TY ++ L
Sbjct: 334 EKMCGRGMKPNAVVFTI--LIDAHCKKGDAETMLELHREMRERGV-RPDAVTYNAIVNGL 390
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
++ + A + EM G+ P YT L+ YC+ +D A + + Q D
Sbjct: 391 CRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMA-MEIKQNMVAEGVGLD 449
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
TY+ LI A R E + +M E + P+ T +V+ + + G R+L
Sbjct: 450 EVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLK 509
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
M ++ KP V T N I++ F GQ+ + N G+ P+ T+NIL+ + K
Sbjct: 510 EM-QNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCK 567
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 90/220 (40%), Gaps = 3/220 (1%)
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
L A P+ N ++ G++ + +++ ++ G+ +FN +I +
Sbjct: 231 LLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGD 290
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
D ++ M + TY +I+ +G + FE+M GMK + F
Sbjct: 291 LDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTI 350
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
LI+ + G ++ R + + + YNA+++ +A DL + M+
Sbjct: 351 LIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAG 410
Query: 457 CRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
RPD+ T++ + + Y KE D ++Q M+ E G
Sbjct: 411 LRPDTVTYTTLIDGYCKEEELDMAMEIKQ---NMVAEGVG 447
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
Query: 144 EGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLN 203
E TY L+ L K+G+ A +V EM+E G+EP YT ++ A+CR + L
Sbjct: 450 EVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLK 509
Query: 204 QMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKA 263
+M+ +P V TY+ ++ + + + L M V+P+ +T NI+L G+ K
Sbjct: 510 EMQN-KGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKH 568
Query: 264 GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
G +E + S + PD+ +I+ K
Sbjct: 569 GKVTDIEELKS----AKGTVPDLGVYTSIVGEIVKK 600
>gi|125600636|gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japonica Group]
Length = 661
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 155/348 (44%), Gaps = 2/348 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P+ Y LL K G + A +V +EM + G+ P Y+ L+ AY R + A +
Sbjct: 289 KPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARI 348
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +M+ +P Y +S ++ D ++ + ++M V P+ N+++ +
Sbjct: 349 LLKEMEA-DGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTF 407
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
GK M E +PDV T NT++ G+ D +++ R
Sbjct: 408 GKYNCLGHAMDAFDRMREEGI-EPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLG 466
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T T+NI+I G+++ ++ + +++ M++ TY +++ + G K E
Sbjct: 467 TTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIE 526
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
M A+G+K + L+N YA GL ++ V+ + + N++I+A +
Sbjct: 527 AMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDR 586
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
+ E V + MKE RPD T++ + +A + +KV + +E +
Sbjct: 587 RIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMI 634
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 147/329 (44%), Gaps = 2/329 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E TY L+ ++G+ E AR + EM +G++P+ +++ +LA + +AF
Sbjct: 325 PDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAV 384
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L +M +PD + Y+ +I + M E + P+ VT N ++ +
Sbjct: 385 LREMHA-SGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHC 443
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G D+ + M ES C T N ++++ + + + +E + + G+ P
Sbjct: 444 KGGRHDRAIELFDEMRES-NCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNI 502
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+ L+ YG+ + + +E M+ + + Y+ ++ A++ G A H +
Sbjct: 503 ITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKA 562
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M A+G++A T LIN + + S ++ + + +V Y ++ A I+ +
Sbjct: 563 MRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQ 622
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEA 470
++ +Y+ M C PD + +++ A
Sbjct: 623 FEKVPVIYEEMITSGCAPDRKARAMLRSA 651
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/362 (19%), Positives = 144/362 (39%), Gaps = 40/362 (11%)
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELA---RKVFNEMVEEGIEPTPELYTA 184
L++ +L+E F P +Y LL LL + P A ++ ++ E +EP L++
Sbjct: 168 LRLLGLLREHSFL-PDLASYSHLLALLLNTRDPPEAALLDRLLGDLRESRLEPDAPLFSD 226
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L++A+ R L D A L + + P + LI + A R E L+
Sbjct: 227 LISAFARARLPDAALELLASAQAI-GLTPRSNAVTALISSLGSARRVAEAEALF------ 279
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+E L+G + KP N +L + G +
Sbjct: 280 ------------------------LEFFLAGEI-----KPRTRAYNALLKGYVKIGSLKN 310
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
E+ ++ G+ P+ T+++L+ AY + ++ +++ M +S ++ ++
Sbjct: 311 AEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILA 370
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
F D G+ + +MHA G++ D + +I+ + + + + I
Sbjct: 371 GFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEP 430
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
+V +N +I A K ++ M+E +C + T++IM +E + V A+
Sbjct: 431 DVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAML 490
Query: 485 QE 486
E
Sbjct: 491 AE 492
>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 608
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 158/352 (44%), Gaps = 4/352 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG-IEPTPELYTA 184
+A+++F+ +K+ +P T+ L+ G +G+PE K+ + M +G ++P Y
Sbjct: 146 EAMKIFQKMKDTGC-KPTTSTFNTLIKGYGNAGKPEEGLKMLHLMSLDGSVKPNDRTYNI 204
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ A+C I+EA+ L++M QPDV TY+ L +A E L +M
Sbjct: 205 LVRAWCSKKNIEEAWNVLHKM-VASGIQPDVVTYNILARAYAQKGETLRAEDLILEMQYE 263
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
V PN T I++ GY K G + R + M E P++ N+++ F + D
Sbjct: 264 KVAPNERTCGIIVNGYCKEGNMIEALRFVYRMKELGV-HPNLVIFNSLIKGFLDITDTDG 322
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
++ +G+ P+ TF+ ++ A+ + DK + M K ++ + +
Sbjct: 323 VDEALTLMEEYGVKPDVITFSTIMNAWSSAGLMDKCQEIFNDMAKAGIEPDIHAFSILAK 382
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
+ G+ ++ E M G++ + +I+G+ +AG ++ I+
Sbjct: 383 GYVRAGETENAESVLTSMAKSGVRPNVVICTTIISGWCSAGKMENAKMVYEKMCEIGISP 442
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
N+ + +I +A + E + + M+EK P+ T ++ +A+ G+
Sbjct: 443 NLKTFETLIWGYAEARQPGKAEELLQLMEEKGVFPEKSTIQLVADAWRNIGL 494
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 156/359 (43%), Gaps = 37/359 (10%)
Query: 152 VLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNC 211
+L+GK G+P A +F+ +VE+G PT YT L+AA + + F+ +++++
Sbjct: 67 ILIGK-GKPHEANLIFDNLVEDGHRPTLITYTTLVAALTKLKHFESIFLLISKVEE-NGM 124
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
+PD Y+ +I A ++ + ++Q M + P T T N ++ GYG AG ++ +
Sbjct: 125 KPDSILYNAMINAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNAGKPEEGLK 184
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+L M + KP+ T N ++ + +K ++ K GI P+ T+NIL AY
Sbjct: 185 MLHLMSLDGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDVVTYNILARAY 244
Query: 332 GKK-----------------------------RMYDKMSSVMEYMR------KLQFPWTS 356
+K Y K +++E +R +L
Sbjct: 245 AQKGETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNL 304
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
+N++I+ F D+ D ++ M G+K D TF ++N +++AGL K
Sbjct: 305 VIFNSLIKGFLDITDTDGVDEALTLMEEYGVKPDVITFSTIMNAWSSAGLMDKCQEIFND 364
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+K I ++ ++ + ++A + E V M + RP+ + + + G
Sbjct: 365 MAKAGIEPDIHAFSILAKGYVRAGETENAESVLTSMAKSGVRPNVVICTTIISGWCSAG 423
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 156/383 (40%), Gaps = 6/383 (1%)
Query: 114 TFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE 173
T + K + F+++ + E+ +P Y ++ +SG + A K+F +M +
Sbjct: 98 TLVAALTKLKHFESIFLLISKVEENGMKPDSILYNAMINAFSESGNVKEAMKIFQKMKDT 157
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
G +PT + L+ Y +E L+ M + +P+ TY+ L++A E
Sbjct: 158 GCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLMSLDGSVKPNDRTYNILVRAWCSKKNIEE 217
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
+ M + P+ VT NI+ Y + G + E ++ M + P+ T I+
Sbjct: 218 AWNVLHKMVASGIQPDVVTYNILARAYAQKGETLRAEDLILEM-QYEKVAPNERTCGIIV 276
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
+ + +G + R+ + + G+ P FN LI + D + + M +
Sbjct: 277 NGYCKEGNMIEALRFVYRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEYGVK 336
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
T++ ++ A+S G + F M G++ D F L GY AG S
Sbjct: 337 PDVITFSTIMNAWSSAGLMDKCQEIFNDMAKAGIEPDIHAFSILAKGYVRAGETENAESV 396
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ +K + NV +IS A + + VY++M E P+ +TF + YA+
Sbjct: 397 LTSMAKSGVRPNVVICTTIISGWCSAGKMENAKMVYEKMCEIGISPNLKTFETLIWGYAE 456
Query: 474 EGMNDKVYALEQEKLQMLLEASG 496
K E+L L+E G
Sbjct: 457 ARQPGKA-----EELLQLMEEKG 474
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 1/191 (0%)
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
V + ++++ KG+ ++ G P T+ L+ A K + ++ + ++
Sbjct: 58 VHSRTKLMNILIGKGKPHEANLIFDNLVEDGHRPTLITYTTLVAALTKLKHFESIFLLIS 117
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
+ + S YN +I AFS+ G+ K F++M G K T TF LI GY NAG
Sbjct: 118 KVEENGMKPDSILYNAMINAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNAG 177
Query: 406 LFHKVISSVRLAS-KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
+ + + L S + N YN ++ A ++ E V +M +PD T+
Sbjct: 178 KPEEGLKMLHLMSLDGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDVVTY 237
Query: 465 SIMTEAYAKEG 475
+I+ AYA++G
Sbjct: 238 NILARAYAQKG 248
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
++G+ E A V M + G+ P + T +++ +C ++ A + +M + P++
Sbjct: 386 RAGETENAESVLTSMAKSGVRPNVVICTTIISGWCSAGKMENAKMVYEKMCEI-GISPNL 444
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
T+ TLI +A + E L Q M+E+ V P T +V + G+ + +R+
Sbjct: 445 KTFETLIWGYAEARQPGKAEELLQLMEEKGVFPEKSTIQLVADAWRNIGLLCEAKRI 501
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 148/373 (39%), Gaps = 36/373 (9%)
Query: 138 PFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDE 197
P P TY L+ ++ +P+L VF ++ G+ P Y AL+ + + +D+
Sbjct: 112 PEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDK 171
Query: 198 AFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVL 257
A +M+ P+V TYS+LI + E + + M V PN +T N ++
Sbjct: 172 AHDLFYKMEE-QGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLI 230
Query: 258 GGYGKAGMFDQMERVLSGMLES--------------ATC--------------------K 283
GY +GM+ + RV M S A C K
Sbjct: 231 HGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPK 290
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
PDV + +L +A G + M+ + G+ P+ FN LI AY + M DK +
Sbjct: 291 PDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLM 350
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
E M K T++ VI AF +G F M G+ DT + CLI G N
Sbjct: 351 FEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCN 410
Query: 404 AGLFHKVISSVR-LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
K + + SK + F+ ++I+ K + E + V + RP+
Sbjct: 411 RRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLI 470
Query: 463 TFSIMTEAYAKEG 475
TF+ + + Y G
Sbjct: 471 TFNSLVDGYCLVG 483
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 150/365 (41%), Gaps = 4/365 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A +F ++EQ P TY L+ L K+ + + A +V +MV G+ P Y L
Sbjct: 171 KAHDLFYKMEEQGI-MPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCL 229
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ Y + + E+ +M + PDV ++ + A R + ++ M +
Sbjct: 230 IHGYSTSGMWKESVRVFKEMSS-SLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKG 288
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ ++ +L GY AG M+ + + M+ PD NT+++ +A G +D
Sbjct: 289 PKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVV-PDRHVFNTLINAYARLGMMDKS 347
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+E G++P+ TF+ +I A+ + D +M P ++ Y+ +I+
Sbjct: 348 LLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQG 407
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKAD-TKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
+ D + M ++G+ K F +IN G + V L
Sbjct: 408 QCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRP 467
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
N+ +N+++ ++ E + M+ PD T++ + + Y K G D L
Sbjct: 468 NLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLF 527
Query: 485 QEKLQ 489
++ L
Sbjct: 528 RDMLH 532
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 95/182 (52%), Gaps = 5/182 (2%)
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
+A+++F+EM+E G+ + Y +L CRN+ DEA + L ++ ++ N + D+ T++ +
Sbjct: 557 VAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSM-NVKFDILTFNIV 615
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
I+A R + + L+ + + P +T +++ K F+ + + S M E ++
Sbjct: 616 IRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSM-EKSS 674
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY---GKKRMYD 338
C PD +N I+ + NKG+V + K GI PE T ++LI + GK R Y
Sbjct: 675 CTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYI 734
Query: 339 KM 340
K+
Sbjct: 735 KL 736
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/386 (19%), Positives = 148/386 (38%), Gaps = 38/386 (9%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ SG + + +VF EM + P + + A C++ I EA
Sbjct: 220 RPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARD 279
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ M L +PDV +Y L+ A ++ L+ M V P+ N ++ Y
Sbjct: 280 IFDSM-VLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAY 338
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ GM D+ + M + PD+ T +T++S F G++D + + G+ P+
Sbjct: 339 ARLGMMDKSLLMFEDMTKQGV-NPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPD 397
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP------WTSS----------------- 357
T ++ LI +R K ++ M P +TS
Sbjct: 398 TAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVV 457
Query: 358 -------------TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
T+N++++ + +G+ K + M + G++ D T+ L++GY
Sbjct: 458 DLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKH 517
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
G ++ R ++ YN ++ +A + + ++ M E T+
Sbjct: 518 GRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTY 577
Query: 465 SIMTEAYAKEGMNDKVYALEQEKLQM 490
+ + + D+ L ++ M
Sbjct: 578 ATVLGGLCRNNCTDEANMLLEKLFSM 603
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 118/292 (40%), Gaps = 35/292 (11%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L K G+ + V + ++ G P + +L+ YC + EA L+ M+++ +P
Sbjct: 444 LCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESV-GVEP 502
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-------MF 266
D+YTY+TL+ R + TL++DM + VT +V+ NI+L G +A MF
Sbjct: 503 DIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMF 562
Query: 267 DQM------------ERVLSGM---------------LESATCKPDVWTMNTILSVFANK 299
+M VL G+ L S K D+ T N ++
Sbjct: 563 HEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKV 622
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G+ + + +G+ P T+ ++I K+ ++ ++ M K S
Sbjct: 623 GRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRIL 682
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
N +I + G+ ++ +G+ + T LI ++ G + + I
Sbjct: 683 NEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYI 734
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 55/122 (45%)
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
T TYN +I + F ++ G+ D ++ LI+G++ G K
Sbjct: 117 TIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLF 176
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
+ I NV Y+++I+ K ++ + ERV ++M RP++ T++ + Y+
Sbjct: 177 YKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTS 236
Query: 475 GM 476
GM
Sbjct: 237 GM 238
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 165/367 (44%), Gaps = 9/367 (2%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
LK Q QAL + + F+ K Y L+ L K GQ A ++ + + ++P
Sbjct: 138 LKGQIHQALHFHDKVVALGFHLNKV-CYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNV 196
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+Y ++ + C+ L++EAF ++M + PDV TYS LI + L+
Sbjct: 197 VMYNTIIDSMCKVKLVNEAFDLYSEMVS-KGISPDVVTYSALISGFCILGKLNDAIGLFN 255
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
M + P+ T +I++ G+ K G + + VL+ M++ KPDV T +++ +
Sbjct: 256 KMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGI-KPDVVTYCSLMDGYCLV 314
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
QV+ + + G+ +++NI+I + K + D+ ++ + M TY
Sbjct: 315 KQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTY 374
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
N++I+ G + ++MH G+ D T+ +++ H+V ++ L +K
Sbjct: 375 NSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKN---HQVDKAIALLTK 431
Query: 420 LQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
++ I ++ Y +I K L + + +++ + K T+++M + + +
Sbjct: 432 MKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDL 491
Query: 477 NDKVYAL 483
DK AL
Sbjct: 492 FDKALAL 498
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 14/317 (4%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ G+ A +FN+M+ E I P ++ L+ +C+ + EA
Sbjct: 229 PDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNV 288
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L M +PDV TY +L+ + ++++ M + VT N + NI++ G+
Sbjct: 289 LAMMMK-QGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFC 347
Query: 262 KAGMFDQMERVLSGMLESATCK---PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
K D+ + M CK PDV T N+++ G++ + ++ + G+
Sbjct: 348 KIKKVDEAMNLFKEM----HCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVP 403
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
+ T+N ++ A K DK +++ M+ TY +I+ G K +
Sbjct: 404 HDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNI 463
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISA 435
FE + +G T+ +I G+ + LF K ++ L SK++ N Y +I +
Sbjct: 464 FEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALA---LLSKMEDNGCIPNAKTYEIIILS 520
Query: 436 CIKADDLMEMERVYKRM 452
+ D+ E++ + M
Sbjct: 521 LFEKDENDMAEKLLREM 537
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 147/341 (43%), Gaps = 8/341 (2%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
T+ L+ + G + VF ++++G EP T L+ C I +A +++
Sbjct: 93 TFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKV 152
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
L + Y TLI + L + +D + V PN V N ++ K +
Sbjct: 153 VAL-GFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKL 211
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
++ + S M+ S PDV T + ++S F G+++ + K + I+P+ TF+
Sbjct: 212 VNEAFDLYSEMV-SKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFS 270
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
IL+ + K+ + +V+ M K TY ++++ + + + F M
Sbjct: 271 ILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQG 330
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDL 442
G+ A+ +++ +ING+ KV ++ L ++ I +V YN++I K+ +
Sbjct: 331 GVTANVQSYNIMINGFCK---IKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKI 387
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
++ M ++ D T++ + +A K DK AL
Sbjct: 388 SYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIAL 428
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 115/272 (42%), Gaps = 3/272 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A V M+ +Q +P TY L+ Q A+ +FN M + G+ + Y +
Sbjct: 284 EAKNVLAMMMKQGI-KPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIM 342
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +C+ +DEA +M N PDV TY++LI + + L +M +R
Sbjct: 343 INGFCKIKKVDEAMNLFKEMHC-KNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 401
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
V + +T N +L K D+ +L+ M + +PD++T ++ G++
Sbjct: 402 VPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGI-QPDMYTYTILIDGLCKGGRLKDA 460
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ +E G + T+ ++I + ++DK +++ M + TY +I +
Sbjct: 461 QNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILS 520
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
+ + E +M A G+ K CL
Sbjct: 521 LFEKDENDMAEKLLREMIARGLLFGWKKAYCL 552
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 65/166 (39%), Gaps = 1/166 (0%)
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
GI + TFNILI + + SV + K + + T +I+ G
Sbjct: 86 GIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQA 145
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
+ +++ A G + + LING G + +R + NV YN +I +
Sbjct: 146 LHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDS 205
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKV 480
K + E +Y M K PD T+S + + G +ND +
Sbjct: 206 MCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAI 251
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 148/337 (43%), Gaps = 6/337 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P +Y ++ L K G + A ++EM++ + P Y +++AA + +D A
Sbjct: 9 PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L M +PNC +TY++++ + + E +++ M + P+ VT N ++
Sbjct: 69 LTVM-VMPNC----FTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLC 123
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G + ++ M++ KPD+ T T+L +A+KG + M G+ +
Sbjct: 124 KNGKCTEARKIFDSMVKRGL-KPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDH 182
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
FNILI AY K+ D++ V MR+ + Y VI+ +G FEQ
Sbjct: 183 HVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQ 242
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M +G+ + + LI+ + K + I N+ F+N ++ + K
Sbjct: 243 MIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGR 302
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
++E ++++ + PD T+S + + Y G D
Sbjct: 303 VIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMD 339
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 144/348 (41%), Gaps = 3/348 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ +F + +P TY L+ L K+G+ ARK+F+ MV+ G++P Y L
Sbjct: 95 KAIGIFRKMCSDGI-EPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTL 153
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L Y + E L M Q D + ++ LI A + + + ++ M ++
Sbjct: 154 LHGYASKGALVEMHDLLALM-VQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQG 212
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+TPN V V+ G K G D M++ P+V +++ + +
Sbjct: 213 LTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGL-TPNVVVYTSLIHALCTYDKWEKA 271
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
E + + GI+P FN ++ + K+ + + + + + TY+ +I+
Sbjct: 272 EELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDG 331
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ G M + G+K D+ T+ LINGY ++ + + +
Sbjct: 332 YCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPD 391
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ YN ++ + + +Y R+ E + + T++I+ +AK
Sbjct: 392 IITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAK 439
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 126/279 (45%), Gaps = 47/279 (16%)
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
C PDV +Y+T+I + Y +M +R V+P+ VT N ++ KA D+
Sbjct: 7 CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM 66
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
VL+ M+ P+ +T N+I+ + + GQ + + K + GI+P+ T+N
Sbjct: 67 EVLTVMV-----MPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYN----- 116
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
S+M+Y+ K G F+ M G+K D
Sbjct: 117 -----------SLMDYLCK-------------------NGKCTEARKIFDSMVKRGLKPD 146
Query: 391 TKTFCCLINGYANAGLF---HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
T+ L++GYA+ G H ++ ++ + + +Q+ +V +N +I A K + + E+
Sbjct: 147 ITTYGTLLHGYASKGALVEMHDLL-ALMVQNGMQLDHHV--FNILICAYTKQEKVDEVVL 203
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALEQ 485
V+ +M+++ P++ + + + K G ++D + EQ
Sbjct: 204 VFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQ 242
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 161/368 (43%), Gaps = 10/368 (2%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W +VFE + + +P Y L+ L + G+ + A +V + M E G+EP Y
Sbjct: 179 RWESVGKVFEEMSGRGI-EPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTY 237
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM- 241
L+ + C+ + EA L + + QPDV TY+TLI + + L ++M
Sbjct: 238 NVLINSMCKEGSVREAL-DLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMM 296
Query: 242 -DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
E V P+ +T N V+ G K G Q +V + M E+ C+ ++ N ++
Sbjct: 297 QGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENG-CRCNLVAFNLLIGGLLRVH 355
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+V ++ + G+ P++ T++ILI + K R ++ S + MR Y
Sbjct: 356 KVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYI 415
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+++A D G F +M K D + +I+G +G K I+ L +
Sbjct: 416 PLLKAMCDQGMMGQARDLFNEMD-RNCKLDAAAYSTMIHGAFKSG--EKKIAEEFLKDMI 472
Query: 421 Q--IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ + Y+ I+ K+ DL ERV K+M PD F + + Y +G +
Sbjct: 473 DEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTE 532
Query: 479 KVYALEQE 486
K+ L +E
Sbjct: 533 KILELTRE 540
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 140/335 (41%), Gaps = 11/335 (3%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEE---GIEPTPELYTALLAAYCRNSLIDEAFVTL 202
+Y +L L + G + A + M E P YT L+ A C + +A L
Sbjct: 58 SYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLL 117
Query: 203 NQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGK 262
M+ +PDV TY TLI+ DA + L +M E + PN V + +L GY K
Sbjct: 118 RSMQDC-GVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCK 176
Query: 263 AGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETR 322
G ++ + +V M +PDV ++ G+V R + G++P
Sbjct: 177 TGRWESVGKVFEEM-SGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVV 235
Query: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS---DMGDAKHMEYTF 379
T+N+LI + K+ + + + M + TYN +I S +M +A M
Sbjct: 236 TYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEA--MALLE 293
Query: 380 EQMHAEG-MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
E M E ++ D TF +I+G G + + + ++ N+ +N +I ++
Sbjct: 294 EMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLR 353
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ + + M +PDS T+SI+ + K
Sbjct: 354 VHKVKKAMELMDEMASSGLQPDSFTYSILINGFCK 388
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 98/244 (40%), Gaps = 4/244 (1%)
Query: 249 NTVTQNIVLGGYGKAGMFDQ---MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ V+ N VL + G D + RV+S A+ +P+ + T++ +
Sbjct: 55 DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLAS-RPNAISYTTLMRALCADRRAAQA 113
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++ G+ P+ T+ LI D ++ M + Y+ ++
Sbjct: 114 VGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHG 173
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+ G + + FE+M G++ D + LI+ G K + + ++ + N
Sbjct: 174 YCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPN 233
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
V YN +I++ K + E + K M EK +PD T++ + + D+ AL +
Sbjct: 234 VVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLE 293
Query: 486 EKLQ 489
E +Q
Sbjct: 294 EMMQ 297
>gi|115472657|ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group]
gi|28564790|dbj|BAC57720.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|113611463|dbj|BAF21841.1| Os07g0548300 [Oryza sativa Japonica Group]
Length = 661
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 155/348 (44%), Gaps = 2/348 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P+ Y LL K G + A +V +EM + G+ P Y+ L+ AY R + A +
Sbjct: 289 KPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARI 348
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +M+ +P Y +S ++ D ++ + ++M V P+ N+++ +
Sbjct: 349 LLKEMEA-DGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTF 407
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
GK M E +PDV T NT++ G+ D +++ R
Sbjct: 408 GKYNCLGHAMDAFDRMREEGI-EPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLG 466
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T T+NI+I G+++ ++ + +++ M++ TY +++ + G K E
Sbjct: 467 TTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIE 526
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
M A+G+K + L+N YA GL ++ V+ + + N++I+A +
Sbjct: 527 AMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDR 586
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
+ E V + MKE RPD T++ + +A + +KV + +E +
Sbjct: 587 RIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMI 634
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 147/329 (44%), Gaps = 2/329 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E TY L+ ++G+ E AR + EM +G++P+ +++ +LA + +AF
Sbjct: 325 PDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAV 384
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L +M +PD + Y+ +I + M E + P+ VT N ++ +
Sbjct: 385 LREMHA-SGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHC 443
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G D+ + M ES C T N ++++ + + + +E + + G+ P
Sbjct: 444 KGGRHDRAIELFDEMRES-NCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNI 502
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+ L+ YG+ + + +E M+ + + Y+ ++ A++ G A H +
Sbjct: 503 ITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKA 562
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M A+G++A T LIN + + S ++ + + +V Y ++ A I+ +
Sbjct: 563 MRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQ 622
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEA 470
++ +Y+ M C PD + +++ A
Sbjct: 623 FEKVPVIYEEMITSGCAPDRKARAMLRSA 651
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/362 (19%), Positives = 140/362 (38%), Gaps = 40/362 (11%)
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLV-LLGKSGQPELARKVFNEMV--EEGIEPTPELYTA 184
L++ +L+E F P +Y LL LL P+ A E +EP L++
Sbjct: 168 LRLLGLLREHSFL-PDLASYSHLLASLLNTRDPPDAALLDRLLGDLRESRLEPDAPLFSD 226
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L++A+ R L D A L + + P + LI + A R E L+
Sbjct: 227 LISAFARARLPDAALELLASAQAI-GLTPRSNAVTALISSLGSARRVAEAEALF------ 279
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+E L+G + KP N +L + G +
Sbjct: 280 ------------------------LEFFLAGEI-----KPRTRAYNALLKGYVKIGSLKN 310
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
E+ ++ G+ P+ T+++L+ AY + ++ +++ M +S ++ ++
Sbjct: 311 AEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILA 370
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
F D G+ + +MHA G++ D + +I+ + + + + I
Sbjct: 371 GFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEP 430
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
+V +N +I A K ++ M+E +C + T++IM +E + V A+
Sbjct: 431 DVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAML 490
Query: 485 QE 486
E
Sbjct: 491 AE 492
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 146/347 (42%), Gaps = 4/347 (1%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL+ F + ++ P TY L+ L K+ + A ++ M G P YT L+
Sbjct: 98 ALEFFRKMDDR--CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILV 155
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
C+ S + A+ L +M C P++ TY++L+ A R L +DM R
Sbjct: 156 DGLCKESKVAAAWEVLREMLD-AGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGC 214
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
TPN VT ++ G K G +L+ M++ PD+ N +++ QVD
Sbjct: 215 TPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGG-TPDLMIYNMLINGLCKADQVDESI 273
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ + GI P+ T++ +I + D+ ++ Y++ P Y+ +I+
Sbjct: 274 ALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGL 333
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G +E M +G AD T+ LI+G AG + + ++ +
Sbjct: 334 CKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPST 393
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
YN++I + L E + + M+ +C P + T++I+ +
Sbjct: 394 MTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCR 440
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 148/346 (42%), Gaps = 10/346 (2%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L K+ +P+ A+++F M P+ Y LL R ++ A
Sbjct: 7 EPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMA 66
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M L DV +++ L+ A + E ++ MD+R +PN +T ++++ G
Sbjct: 67 LFQEM--LDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRC-SPNVITYSVLIDGL 123
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
KA Q +L M ++ C PDV T ++ + +V + + G P
Sbjct: 124 CKANRVSQAVELLESM-KARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPN 182
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS---TYNNVIEAFSDMGDAKHMEY 377
T+N L+ + R ++S + MR + + TY +I+ +G K
Sbjct: 183 LVTYNSLLHGLCRAR---RVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACA 239
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
M +G D + LING A + I+ +R A I +V Y++VI
Sbjct: 240 MLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLC 299
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+++ L E R+ +K + C PD +S + + K G D+ + L
Sbjct: 300 RSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDL 345
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 122/274 (44%), Gaps = 11/274 (4%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L K G+ + A + +M+++G P +Y L+ C+ +DE+
Sbjct: 216 PNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIAL 275
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L + + +PDV TYS++I + R + L + R P+ + + ++ G
Sbjct: 276 LRRAVS-GGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLC 334
Query: 262 KAGMFDQ---MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
KAG D+ + V++G C DV T +T++ G+VD + G
Sbjct: 335 KAGKVDEAFDLYEVMTG----DGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTP 390
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG--DAKHME 376
P T T+N LI D+ ++E M + ++ TYN +I M D+ ++
Sbjct: 391 PSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALD 450
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
Y F++M G+ D T+ L+ G + H++
Sbjct: 451 Y-FQEMIDNGVIPDHITYSILLEGLKKSKDLHEL 483
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
R+ G +P T+N LI K D+ + E+M+ ++ + TYN +++ G
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 372 AKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL--QIAENVSFY 429
+ F++M + D +F L+ G AG K+ +++ K+ + + NV Y
Sbjct: 61 LERAMALFQEM-LDRRSHDVISFNILVTGLCRAG---KIETALEFFRKMDDRCSPNVITY 116
Query: 430 NAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
+ +I KA+ + + + + MK + C PD T++I+ + KE
Sbjct: 117 SVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKE 161
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 153/339 (45%), Gaps = 15/339 (4%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLID---EA 198
P TY L+ L K+ + A+++ + M G EP +Y AL+ +C+ +D E
Sbjct: 609 PNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEV 668
Query: 199 FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
F +++ LP V+TY++LI A R +L + M E S TPN VT ++
Sbjct: 669 FFRMSKCGYLPT----VHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMID 724
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
G + G + ++LS M+E C P+V T +++ G+VDM + + + G
Sbjct: 725 GLCRIGECQKALKLLS-MMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCA 783
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P T+ +LI + D+ S++ M++ +P Y +V++ FS A
Sbjct: 784 PNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLG--L 841
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVI----SSVRLASKLQIAENVSFYNAVIS 434
E++ + GM + + LI+ ++ AG K + + ++S L I + Y ++I
Sbjct: 842 LEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDT-YTSLIQ 900
Query: 435 ACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
A A L + +Y + K P+ F + + K
Sbjct: 901 ALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIK 939
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 161/379 (42%), Gaps = 17/379 (4%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A Q+ +++ + F P TY K++ L ++ + E A +F EM G+ P YT L
Sbjct: 438 KAFQIIKLMMRKGFV-PDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTIL 496
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ ++C+ LI++A ++M+++ C P V TY+ L+ A + + ++ M +
Sbjct: 497 IDSFCKVGLIEQARSWFDEMESV-GCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAG 555
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA---------------TCKPDVWTMN 290
PNT+T + ++ G KAG + V + M+ ++ + P+V T
Sbjct: 556 CAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYG 615
Query: 291 TILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
++ +V + + + G +P ++ LI + K D V M K
Sbjct: 616 ALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKC 675
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
+ T TY ++I+A QM + T+ +I+G G K
Sbjct: 676 GYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKA 735
Query: 411 ISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
+ + + K NV Y ++I K+ + +++ +M + C P+ T+ ++
Sbjct: 736 LKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINH 795
Query: 471 YAKEGMNDKVYALEQEKLQ 489
G+ D+ ++L E Q
Sbjct: 796 CCAAGLLDEAHSLLSEMKQ 814
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 151/362 (41%), Gaps = 30/362 (8%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY LL K Q +++ + M+ EG P P L+ +L+ +YC A+
Sbjct: 307 PNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKL 366
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMR------FELIETLYQDMDERSVTPNTV-TQN 254
LN+M C P Y+ I + L E +Y++M S N V T N
Sbjct: 367 LNRMAGC-GCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTAN 425
Query: 255 I--VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF 312
L G GK FD+ +++ M+ PD T + +++ +V+ +++
Sbjct: 426 FARCLCGMGK---FDKAFQIIKLMMRKGF-VPDTSTYSKVITFLCEAMKVEKAFLLFQEM 481
Query: 313 RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
++ G+ P+ T+ ILI ++ K + ++ S + M + + TY ++ A+
Sbjct: 482 KSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQV 541
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVI-SSVRLASKL---- 420
F +M G +T T+ L++G AG ++ K+I +S + S
Sbjct: 542 PQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEG 601
Query: 421 ----QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
IA NV Y A+I KA +++ + + M C P+ + + + + K G
Sbjct: 602 EHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGK 661
Query: 477 ND 478
D
Sbjct: 662 LD 663
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/403 (20%), Positives = 155/403 (38%), Gaps = 50/403 (12%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
W +AL+ LK+ Y+P TY L+ +L +GQ ++ +V EM E G
Sbjct: 188 WAKALEELGRLKDFG-YRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVG 246
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
A C+ +A V + + + + D + +I ++A F+ + M
Sbjct: 247 CFAQALCKEGRWSDALVMIER----EDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRC 302
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
S PN VT +L G+ K +R++S M+ C P+ N+++ + N
Sbjct: 303 NSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEG-CNPNPSLFNSLVHSYCNARDYP 361
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKR---------------------------- 335
+ + G P +NI IG+
Sbjct: 362 YAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKV 421
Query: 336 -------------MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
+DK +++ M + F +STY+ VI + + F++M
Sbjct: 422 NTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEM 481
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
+ G+ D T+ LI+ + GL + S + + +V Y A++ A +K +
Sbjct: 482 KSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQV 541
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK---VYA 482
+ ++ RM + C P++ T+S + + K G + K VYA
Sbjct: 542 PQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYA 584
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 97/208 (46%), Gaps = 12/208 (5%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL++ M+ E+ P TY L+ LGKSG+ +++ ++F +M+ +G P Y L
Sbjct: 734 KALKLLSMM-EKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVL 792
Query: 186 LAAYCRNSLIDEAFVTLNQMKTL--PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
+ C L+DEA L++MK P V Y ++++ + +F L ++++
Sbjct: 793 INHCCAAGLLDEAHSLLSEMKQTYWPK---YVQGYCSVVQG--FSKKFIASLGLLEELES 847
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+ +++ + KAG ++ + M+E ++ ++ + +T S+
Sbjct: 848 HGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSS-SLNITSKDTYTSLIQALCLAS 906
Query: 304 MMERWYEKFRNF---GIDPETRTFNILI 328
+E+ +E + G+ PE F LI
Sbjct: 907 QLEKAFELYSEITRKGVVPELSAFICLI 934
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 167/367 (45%), Gaps = 9/367 (2%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
LK Q QAL + + F + G Y L+ L K G+ A + + ++P
Sbjct: 139 LKGQIHQALLFHDNVVAMGFQLDQVG-YGTLIHGLCKVGETRAALDLLRRVDGNLVQPNV 197
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+Y+ ++ C++ +++AF ++M + P+V TYS LI + + L+
Sbjct: 198 VMYSTIIDGMCKDKHVNDAFDLYSEMVS-KGISPNVVTYSALISGFFTVGQLKDAIDLFN 256
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
M ++ P+ T NI++ G+ K G + + V + M++ KP+V T +++ +
Sbjct: 257 KMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGI-KPNVVTYCSLMDGYCLV 315
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
+V+ + G++P+ +++NILI + K + D+ ++ + M TY
Sbjct: 316 KEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTY 375
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
N++I+ +G + ++MH G+ D T+ +++ H+V ++ L +K
Sbjct: 376 NSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKN---HQVDKAIALLTK 432
Query: 420 LQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
L+ I N+ Y +I K L + +++ + K T+++M + +G+
Sbjct: 433 LKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGL 492
Query: 477 NDKVYAL 483
D+ AL
Sbjct: 493 FDEALAL 499
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 155/343 (45%), Gaps = 16/343 (4%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y P T+ L+ L GQ A + +V G + Y L+ C+ + E
Sbjct: 123 YHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCK---VGETR 179
Query: 200 VTLNQMKTLPN--CQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIV 256
L+ ++ + QP+V YST+I C D + + LY +M + ++PN VT + +
Sbjct: 180 AALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFD-LYSEMVSKGISPNVVTYSAL 238
Query: 257 LGGYGKAGMF-DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
+ G+ G D ++ +LE+ KPDV+T N ++ F G++ + +
Sbjct: 239 ISGFFTVGQLKDAIDLFNKMILENI--KPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQ 296
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
GI P T+ L+ Y + +K S++ M + +YN +I+ F +
Sbjct: 297 GIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEA 356
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAV 432
F++MH + + D T+ LI+G G K+ +++L ++ + ++ Y+++
Sbjct: 357 MNLFKEMHHKHIIPDVVTYNSLIDGLCKLG---KISYALKLVDEMHDRGVPPDIITYSSI 413
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ A K + + + ++K++ RP+ T++I+ + K G
Sbjct: 414 LDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGG 456
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 143/351 (40%), Gaps = 37/351 (10%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ GQ + A +FN+M+ E I+P + L+ +C++ + E T
Sbjct: 230 PNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEG-KT 288
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ M +P+V TY +L+ +++ M +R V P+ + NI++ G+
Sbjct: 289 VFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFC 348
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K D+ + M PDV T N+++ G++ + ++ + G+ P+
Sbjct: 349 KIKKVDEAMNLFKEMHHKHII-PDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDI 407
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T++ ++ A K DK +++ ++ TY +I+ G + FE
Sbjct: 408 ITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFED 467
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
+ +G T+ +I+G+ N GLF + ++
Sbjct: 468 LLVKGYNITVNTYTVMIHGFCNKGLFDEALA----------------------------- 498
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLL 492
+ +MK+ C PD+ T+ I+ + + NDK L + + LL
Sbjct: 499 ------LLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKLREMITRGLL 543
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
Q +A+ + LK+Q +P TY L+ L K G+ E A +F +++ +G T Y
Sbjct: 422 QVDKAIALLTKLKDQGI-RPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTY 480
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
T ++ +C L DEA L++MK +C PD TY +I++ D
Sbjct: 481 TVMIHGFCNKGLFDEALALLSKMKD-NSCIPDAVTYEIIIRSLFD 524
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 149/337 (44%), Gaps = 5/337 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P + TY ++ K G+ + A ++ + +G P Y +L+ C++ ID A
Sbjct: 290 EPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALA 349
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ +P + Y+TLIK L DM + ++P+ T N+V+ G
Sbjct: 350 LFEEALG-KGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGL 408
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G +L+ + PD++T NT++ + + ++D + + G+ P+
Sbjct: 409 CKMGCVSDANNLLNAAIAKGYL-PDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPD 467
Query: 321 TRTFN-ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
T+N IL G + D M + M K P TYN +IE+
Sbjct: 468 VITYNSILNGLCKAAKPEDVMETFKMIMEKGCLP-NIITYNILIESLCKARKVTEALDLL 526
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR-LASKLQIAENVSFYNAVISACIK 438
E++ G+ D +F +I+G+ N G + R + + +I V+ YN +I+A +
Sbjct: 527 EEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSE 586
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
D+ ++++ M +K C PDS T+ +M + + K G
Sbjct: 587 KLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVG 623
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 157/358 (43%), Gaps = 16/358 (4%)
Query: 126 QALQVFEMLKEQPFY--QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
+A+ VFE + FY +P +Y ++ +L + G A KV+ M EGI P +T
Sbjct: 94 EAVDVFERMD---FYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFT 150
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA-MRFELIETLYQDMD 242
+ ++CR A LN M + C+ + Y T+I + + E E L+ M
Sbjct: 151 IRIKSFCRTKRPLAALRLLNNMPS-QGCELNAVVYCTVISGFYEENYQVEAYE-LFNKML 208
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG-- 300
+ P+ T N ++ K G + E++L+ +L++ C P+++T N + KG
Sbjct: 209 RLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVC-PNLFTFNIFIQGLCRKGVL 267
Query: 301 -----QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
+V E + K N G++P+ T+N +I Y K S +++ + F
Sbjct: 268 EGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPD 327
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
TY ++I GD H FE+ +G+K + LI G + GL K + +
Sbjct: 328 EFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMN 387
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
SK ++ ++ YN VI+ K + + + K PD TF+ + + Y K
Sbjct: 388 DMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCK 445
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 153/366 (41%), Gaps = 12/366 (3%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+A ++F +ML+ F P T+ KL+ +L K G + K+ N++++ G+ P +
Sbjct: 199 EAYELFNKMLRLGIF--PHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNI 256
Query: 185 LLAAYCR-------NSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
+ CR NS + EA L++M +PD +TY+T+I + + +
Sbjct: 257 FIQGLCRKGVLEGANSKVVEAENYLHKMVN-KGLEPDDFTYNTIIYGYSKVGKIQDASRI 315
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
+D + P+ T ++ G + G D + L KP + NT++ +
Sbjct: 316 LKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGL-KPSIVLYNTLIKGLS 374
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+G V + G+ P+ T+N++I K ++++ +
Sbjct: 375 QQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIF 434
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
T+N +I+ + + + M + G+ D T+ ++NG A V+ + ++
Sbjct: 435 TFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMI 494
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
+ N+ YN +I + KA + E + + ++ + PD +F + + G
Sbjct: 495 MEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDL 554
Query: 478 DKVYAL 483
D+ Y L
Sbjct: 555 DEAYQL 560
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 135/325 (41%), Gaps = 25/325 (7%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
NT+ + S L +ALQ+ + ++ P TY ++ L K G A + N
Sbjct: 367 NTLIKGLSQQGL---VLKALQLMNDMSKEGM-SPDIWTYNLVINGLCKMGCVSDANNLLN 422
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
+ +G P + L+ YC+ +D A L+ M + PDV TY++++ A
Sbjct: 423 AAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWS-HGVTPDVITYNSILNGLCKA 481
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG----MFDQMERVLS-GMLESATCK 283
+ E + ++ + E+ PN +T NI++ KA D +E + + G++
Sbjct: 482 AKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLI------ 535
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFR----NFGIDPETRTFNILIGAYGKKRMYDK 339
PD + T++S F N G +D Y+ FR + I T+NI+I A+ +K D
Sbjct: 536 PDPVSFGTVISGFCNNGDLD---EAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDM 592
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE-GMKADTKTFCCLI 398
+ M S TY +I+ F +G+ Y F E G TF +I
Sbjct: 593 AQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNS-GYDFLLKEIEIGFVPSLTTFGRVI 651
Query: 399 NGYANAGLFHKVISSVRLASKLQIA 423
N H+ + V L + +
Sbjct: 652 NCLCVQHRVHEAVGIVHLMVRTGVV 676
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/345 (19%), Positives = 129/345 (37%), Gaps = 50/345 (14%)
Query: 197 EAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIV 256
+A N +K + TY +I+ F+ +E + +M R N++ + +
Sbjct: 22 KALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEM--RLNVDNSLLEGVY 79
Query: 257 LGG---YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
+ YG+ G + V M + C+P +++ N I+++ G + + Y + +
Sbjct: 80 VSAMRNYGRKGKVQEAVDVFERM-DFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMK 138
Query: 314 NFGIDPETRTFNILIGAYGKK-------RMYDKMSS------------------------ 342
+ GI P+ TF I I ++ + R+ + M S
Sbjct: 139 HEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQV 198
Query: 343 ----VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+ M +L +T+N ++ G + E ++ G+ + TF I
Sbjct: 199 EAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFI 258
Query: 399 NGYANAGLFHKVISSV--------RLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
G G+ S V ++ +K ++ + YN +I K + + R+ K
Sbjct: 259 QGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFT-YNTIIYGYSKVGKIQDASRILK 317
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
K K PD T+ + ++G D AL +E L L+ S
Sbjct: 318 DAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPS 362
>gi|222622724|gb|EEE56856.1| hypothetical protein OsJ_06476 [Oryza sativa Japonica Group]
Length = 538
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 156/370 (42%), Gaps = 45/370 (12%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P GTY L+ L ++G+ A V + M+E+ P + YT ++ AYCR+ I EA +
Sbjct: 158 EPDVGTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKL 217
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ +M+ L C P+V TY+ LI+A D +F+ +E + + + P+TVT NI + G
Sbjct: 218 LMAEMERL-GCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGL 276
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ----VDMMER-----WYE- 310
K G + +L ML +P +T + +L+ + + + ++ER WY
Sbjct: 277 CKKGKAKEALELLDVMLGEGL-EPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAG 335
Query: 311 ---------------KFRNF----------GIDPETRTFNILIGAYGKKRMYDKMSSVME 345
K+R GI+P TRTFNILI + + K S
Sbjct: 336 VVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLC---VGGKSSLAKS 392
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
+ L F TYN ++ F G M + + D T+ +I+G
Sbjct: 393 LIHSLGFAANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRER 452
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
F + L ++ +++ + AD + E+ R++ K PD F
Sbjct: 453 KFDAATAC--FLKSLTSGLSMDVLTVLLNRLVYADKIWEINRIF---DGKDFVPDHHVFD 507
Query: 466 IMTEAYAKEG 475
+ + + G
Sbjct: 508 LTIRTFCRVG 517
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 163/353 (46%), Gaps = 17/353 (4%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+AL+ F EML P + L+ + + + +LA ++ ++ G+EP Y+
Sbjct: 112 EALKAFDEMLASG--VAPNASSQNILIKMHARRSEFDLAWELIHK---SGVEPDVGTYST 166
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+A CR I EA+ L+ M NC+P V TY+ +++A R + L +M+
Sbjct: 167 LIAGLCRAGKIVEAWGVLDWMLE-KNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERL 225
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT--CKPDVWTMNTILSVFANKGQV 302
PN VT N+++ FD++E+VL +ES+T KP T N ++ KG+
Sbjct: 226 GCLPNVVTYNVLIRALCDDDKFDEVEQVL---MESSTKDWKPSTVTYNIYMNGLCKKGKA 282
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYG-KKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ G++P T++IL+ R+ D + ++E +L++ YN
Sbjct: 283 KEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIY-LLERSTELKWYAGVVAYNT 341
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
V+ + +MG + + M +G++ +T+TF LI G K + L L
Sbjct: 342 VMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGG---KSSLAKSLIHSLG 398
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
A NV YN ++ L E R+ M+EK+ PD T++I+ + +E
Sbjct: 399 FAANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRE 451
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 132/334 (39%), Gaps = 40/334 (11%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P Y L+ L ++G+ A K F+EM+ G+ P L+ + R S D A+
Sbjct: 92 PNVLCYNTLVNALAEAGREGEALKAFDEMLASGVAPNASSQNILIKMHARRSEFDLAWEL 151
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+++ +PDV TYSTLI G
Sbjct: 152 IHK----SGVEPDVGTYSTLI-----------------------------------AGLC 172
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+AG + VL MLE C+P V T I+ + G++ + + G P
Sbjct: 173 RAGKIVEAWGVLDWMLEK-NCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNV 231
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+N+LI A +D++ V+ + ++ TYN + G AK +
Sbjct: 232 VTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELLDV 291
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M EG++ T+ L+N ++ I + +++L+ V YN V+S+ +
Sbjct: 292 MLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEMGK 351
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ ++ M +K P++ TF+I+ + G
Sbjct: 352 WRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGG 385
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 5/203 (2%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
++P TY + L K G+ + A ++ + M+ EG+EPT ++ LL C +S + +A
Sbjct: 262 WKPSTVTYNIYMNGLCKKGKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAI 321
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L + L V Y+T++ + + ++ I L DM ++ + PNT T NI++
Sbjct: 322 YLLERSTEL-KWYAGVVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRS 380
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
G + ++ S +V T N +L F G++ R I P
Sbjct: 381 LCVGG----KSSLAKSLIHSLGFAANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAP 436
Query: 320 ETRTFNILIGAYGKKRMYDKMSS 342
+ T+ I+I ++R +D ++
Sbjct: 437 DEVTYTIIIDGLCRERKFDAATA 459
>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 158/334 (47%), Gaps = 10/334 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ + G E + K+ +M+ +G++ + YT LL++ C++ IDEA +
Sbjct: 373 PDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVIL 432
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L++M+ + +PD+ TYS + V+ E IE LY++M + + PN+ + ++ G
Sbjct: 433 LHEMEVI-GLKPDLLTYS---RGAVE----EAIE-LYEEMCSKRIYPNSFVCSAIISGLF 483
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G + + + +S + ++ N ++ +A G + R Y++ GI P
Sbjct: 484 EKGAISEAQMYFDSVTKSDVAE-EIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTI 542
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
TFN LI + KK + +++ ++ TS TY ++ + + GD M +
Sbjct: 543 VTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHE 602
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M A+ +K T+ ++ G G H+ + ++ + + YN VI + KA D
Sbjct: 603 MEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHD 662
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
L + +++ +M + +P T++++ G
Sbjct: 663 LQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYG 696
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 138/327 (42%), Gaps = 17/327 (5%)
Query: 173 EGIEPTPELYTALLAAYCRNSLIDEA---FVTLNQMKTLPNCQPDVYTYSTLIKACVDAM 229
E P+ + AL++ +C+ +D A F + + LP DVY+Y+ L+ A
Sbjct: 264 EEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLP----DVYSYNILLHGLCVAG 319
Query: 230 RFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTM 289
E DM+ V P+ VT NI+ G+ G+ +V+ ML + PD+ T
Sbjct: 320 SMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGL-NPDLVTY 378
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
++ G ++ + EK + G+ T+ +L+ + K D+ ++ M
Sbjct: 379 TILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEV 438
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
+ TY+ G + +E+M ++ + ++ +I+G G +
Sbjct: 439 IGLKPDLLTYSR--------GAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISE 490
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+K +AE + YN +I K ++ E R YK++ EK P TF+ +
Sbjct: 491 AQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIY 550
Query: 470 AYAKEG-MNDKVYALEQEKLQMLLEAS 495
+ K+G + + V L+ K+ L+ S
Sbjct: 551 GFCKKGKLAEAVKLLDTIKVHGLVPTS 577
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 122/281 (43%), Gaps = 15/281 (5%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
+ +F ++ ++ +E Y Y KL G G+ A + + +++E+GI PT
Sbjct: 492 QMYFDSVTKSDVAEEIILYNIMIDGYAKL----GNIGE---AVRSYKQIIEKGISPTIVT 544
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+ +L+ +C+ + EA L+ +K + P TY+TL+ + + + +M
Sbjct: 545 FNSLIYGFCKKGKLAEAVKLLDTIK-VHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEM 603
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ +++ P +T +V+ G K G + ++L M PD T NT++ F
Sbjct: 604 EAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGL-FPDQITYNTVIQSFCKAHD 662
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGA---YGKKRMYDKMSSVMEYMRKLQFPWTSST 358
+ + + + + P T+N+LI YG + D++ + ++ T
Sbjct: 663 LQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRL---LVTLQDQSIRLTKVA 719
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
Y +I+A GD ++ F QM G + + + +IN
Sbjct: 720 YTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVIN 760
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 159/365 (43%), Gaps = 39/365 (10%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMV-EEGIEPTPEL---- 181
AL +F++L+ + ++ ++ + ++ + GQ + R+V N+MV EEG P L
Sbjct: 98 ALFLFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELL 157
Query: 182 -------------YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
+ L AY R ++ +A L +MK L N Q + TY++L+ +
Sbjct: 158 CNSFRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVL-NLQVSIATYNSLL---YNL 213
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT--CKPDV 286
+++ +Y ++ V N T I++ G + +++ ++ + E+ P V
Sbjct: 214 RHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQ---SRLQDAVTFLRETGGEEFGPSV 270
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
+ N ++S F G VD+ + ++ +G+ P+ ++NIL+ + M +E+
Sbjct: 271 VSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLC---VAGSMEEALEF 327
Query: 347 MRKLQFPWTS---STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
++ TYN + F +G ++M G+ D T+ LI G+
Sbjct: 328 TNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQ 387
Query: 404 AGLFHKVISSVRLASKL---QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
G + S +L K+ + ++ Y ++S+ K+ + E + M+ +PD
Sbjct: 388 MG---NIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPD 444
Query: 461 SETFS 465
T+S
Sbjct: 445 LLTYS 449
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 105/267 (39%), Gaps = 3/267 (1%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
K + +A+++ + +K P TY L+ + G + +EM + I+PT
Sbjct: 555 KGKLAEAVKLLDTIKVHGLV-PTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQI 613
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
YT ++ C+ + E+ L M PD TY+T+I++ A + L+
Sbjct: 614 TYTVVVKGLCKEGRLHESVQLLKYMYA-RGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQ 672
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M + S+ P+ VT N+++ G G +R+L L+ + + TI+ KG
Sbjct: 673 MLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLV-TLQDQSIRLTKVAYTTIIKAHCAKG 731
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
V ++ + G + R ++ +I K+ + M P
Sbjct: 732 DVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICL 791
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGM 387
++ AF GD + F M G+
Sbjct: 792 VMLNAFHRSGDPNSVFEIFAMMIKCGL 818
>gi|218190151|gb|EEC72578.1| hypothetical protein OsI_06020 [Oryza sativa Indica Group]
Length = 738
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 157/353 (44%), Gaps = 4/353 (1%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
K+Q +A ++ L E P E TY LL +G A V +EM E GI P
Sbjct: 331 KRQLNKAESIYMALLEAQCV-PTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNAT 389
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
+Y A L + ++A +MK C+ + T++ +I A + ++ +
Sbjct: 390 VYNAYLDGLLKARCTEKAVEVYQRMKR-ERCRANTETFTLMINVYGKAKQPMSSMKVFNE 448
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M PN T ++ + + G+ ++ E V M + A +PDV+ N ++ ++ G
Sbjct: 449 MKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEM-QQAGHEPDVYAYNALMEAYSRAG 507
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+ ++ G +P+ ++NIL+ AYG+ +++ +V E +++ T ++
Sbjct: 508 LPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHM 567
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
++ A + G+A E Q+H G+ DT ++N YA AG + + A +
Sbjct: 568 LLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDD-MERLLAAMER 626
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ +V YN ++A +A + ME + + + D T++ AYA+
Sbjct: 627 RGDADVGTYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAYAR 679
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 91/460 (19%), Positives = 175/460 (38%), Gaps = 50/460 (10%)
Query: 45 SVTSTNKHTSFSSESAVAAKKRLWK------EGEYPGVSETS--IPGYRSKRTPIKNLKK 96
V+ T S + A + R WK +G +P +S + I + K T + + +
Sbjct: 211 GVSRTFDRKKISRKRGGAMRGRGWKYGSGFVDGVFPVLSPMAQDILEFVQKGTDVAKIWE 270
Query: 97 KLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGK 156
L+ + + + K+W + V E + + ++P Y L+ GK
Sbjct: 271 SLDNIPSTHNLFDDLVNVAVQFRMNKKWDLIIPVCEWILYRSSFRPDIICYNLLIESYGK 330
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
Q + +Y ALL A C P
Sbjct: 331 KRQ---------------LNKAESIYMALLEA---------------------QCVPTED 354
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
TY+ L++A +A E + +M E + PN N L G KA ++ V M
Sbjct: 355 TYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRM 414
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
+ C+ + T +++V+ Q + + + ++ G P T+ L+ A+ ++ +
Sbjct: 415 -KRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGL 473
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
+K V E M++ YN ++EA+S G + F M G + D ++
Sbjct: 474 CEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNI 533
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
L++ Y AGL + + ++ + + +++A ++ + E V ++ +
Sbjct: 534 LVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSG 593
Query: 457 CRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
PD+ + M AYA+ G D + E+L +E G
Sbjct: 594 LTPDTFALNAMLNAYARAGRLD-----DMERLLAAMERRG 628
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 95/229 (41%), Gaps = 40/229 (17%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
N + E +S L + A ++F +++ +P +Y L+ G++G E A VF
Sbjct: 497 NALMEAYSRAGLPQG---ASEIFSLMQHMGC-EPDRASYNILVDAYGRAGLHEDAEAVFE 552
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
E+ + G+ PT + + LLAA+ R+ + Q+ PD + + ++ A A
Sbjct: 553 ELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHK-SGLTPDTFALNAMLNAYARA 611
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS-------------- 274
R + +E L M+ R + T N+ + YG+AG +ME +
Sbjct: 612 GRLDDMERLLAAMERRG-DADVGTYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADVVTW 670
Query: 275 -----------------GMLE---SATCKPDVWTMNTILSVFANKGQVD 303
GM+E A C PD T +L+ +++ QV+
Sbjct: 671 TARMGAYARRKEYGRCVGMVEEMVDAGCYPDAGTARVLLAACSDERQVE 719
>gi|307105412|gb|EFN53661.1| hypothetical protein CHLNCDRAFT_58444 [Chlorella variabilis]
Length = 1131
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 128/276 (46%), Gaps = 1/276 (0%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
D +T++++I CV L ++M +R + N T + ++ K G + V
Sbjct: 290 DEFTFTSMISNCVAQQDLGRAMALAEEMRDRGIERNVHTFSALMNVCIKCGQYKLALDVY 349
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
M ++A C +V T NT++ V+ GQ + E+ + I P TRTFN L+ A
Sbjct: 350 RDM-QAAGCPANVVTYNTLIDVYGKSGQWEEALAVLEQMKRERIQPVTRTFNTLMIACNT 408
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+ + V E M P ++TYN +I A S GD + F++M +G + T
Sbjct: 409 SNQWQEALRVYEQMAASSHPPNTTTYNALISAHSKGGDLPKVLAVFKEMVQKGCERSVIT 468
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+ LI+ AG + + NV YN++I+AC + + V+++M+
Sbjct: 469 YSSLISACEKAGEWKLALQLFEEMRGEGCVPNVISYNSLITACAQGAQWEKAAEVFEQMQ 528
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ CRPD +++ + +AY + G + A +E ++
Sbjct: 529 RQGCRPDVVSYTALIQAYERGGQWRRALAAFEEMIR 564
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 112/237 (47%), Gaps = 2/237 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
T+ L+ + K GQ +LA V+ +M G Y L+ Y ++ +EA L QM
Sbjct: 328 TFSALMNVCIKCGQYKLALDVYRDMQAAGCPANVVTYNTLIDVYGKSGQWEEALAVLEQM 387
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
K QP T++TL+ AC + +++ +Y+ M S PNT T N ++ + K G
Sbjct: 388 KR-ERIQPVTRTFNTLMIACNTSNQWQEALRVYEQMAASSHPPNTTTYNALISAHSKGGD 446
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
++ V M++ C+ V T ++++S G+ + + +E+ R G P ++N
Sbjct: 447 LPKVLAVFKEMVQKG-CERSVITYSSLISACEKAGEWKLALQLFEEMRGEGCVPNVISYN 505
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
LI A + ++K + V E M++ +Y +I+A+ G + FE+M
Sbjct: 506 SLITACAQGAQWEKAAEVFEQMQRQGCRPDVVSYTALIQAYERGGQWRRALAAFEEM 562
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 6/197 (3%)
Query: 108 VNTVAETFSDHVL----KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELA 163
+ V TF+ ++ QW +AL+V+E + + P TY L+ K G
Sbjct: 392 IQPVTRTFNTLMIACNTSNQWQEALRVYEQMAAS-SHPPNTTTYNALISAHSKGGDLPKV 450
Query: 164 RKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIK 223
VF EMV++G E + Y++L++A + A +M+ C P+V +Y++LI
Sbjct: 451 LAVFKEMVQKGCERSVITYSSLISACEKAGEWKLALQLFEEMRG-EGCVPNVISYNSLIT 509
Query: 224 ACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK 283
AC ++E +++ M + P+ V+ ++ Y + G + + M+ + C
Sbjct: 510 ACAQGAQWEKAAEVFEQMQRQGCRPDVVSYTALIQAYERGGQWRRALAAFEEMIRARPCA 569
Query: 284 PDVWTMNTILSVFANKG 300
PD NTI+ V G
Sbjct: 570 PDSIVYNTIIDVLWETG 586
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 109/246 (44%), Gaps = 6/246 (2%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ + GKSGQ E A V +M E I+P + L+ A ++ EA QM
Sbjct: 363 TYNTLIDVYGKSGQWEEALAVLEQMKRERIQPVTRTFNTLMIACNTSNQWQEALRVYEQM 422
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ P+ TY+ LI A + ++++M ++ + +T + ++ KAG
Sbjct: 423 AASSH-PPNTTTYNALISAHSKGGDLPKVLAVFKEMVQKGCERSVITYSSLISACEKAGE 481
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+ ++ M C P+V + N++++ A Q + +E+ + G P+ ++
Sbjct: 482 WKLALQLFEEM-RGEGCVPNVISYNSLITACAQGAQWEKAAEVFEQMQRQGCRPDVVSYT 540
Query: 326 ILIGAYGKKRMYDK-MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA---KHMEYTFEQ 381
LI AY + + + +++ E +R S YN +I+ + G + F Q
Sbjct: 541 ALIQAYERGGQWRRALAAFEEMIRARPCAPDSIVYNTIIDVLWETGVGWAQRKAASLFRQ 600
Query: 382 MHAEGM 387
AEG+
Sbjct: 601 ASAEGL 606
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 105/268 (39%), Gaps = 45/268 (16%)
Query: 232 ELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG--MFDQMERVLSGMLESATCKP--DVW 287
E + L +D R + V +++ GG G +FD + R+ G + P D +
Sbjct: 239 EGVLQLLHGLDSRGLA--MVIKDLGKGGLPHRGAQLFDLLRRLGPG----SPLAPLLDEF 292
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T +++S + + E+ R+ GI+ TF+ L+ K Y V M
Sbjct: 293 TFTSMISNCVAQQDLGRAMALAEEMRDRGIERNVHTFSALMNVCIKCGQYKLALDVYRDM 352
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
+ P TYN +I+ + G + EQM E ++ T+TF
Sbjct: 353 QAAGCPANVVTYNTLIDVYGKSGQWEEALAVLEQMKRERIQPVTRTF------------- 399
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
N ++ AC ++ E RVY++M P++ T++ +
Sbjct: 400 ----------------------NTLMIACNTSNQWQEALRVYEQMAASSHPPNTTTYNAL 437
Query: 468 TEAYAKEGMNDKVYALEQEKLQMLLEAS 495
A++K G KV A+ +E +Q E S
Sbjct: 438 ISAHSKGGDLPKVLAVFKEMVQKGCERS 465
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 145/335 (43%), Gaps = 2/335 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY ++ + +SG LA + +M E ++ Y+ ++ + CR+ ID A
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M+T + V TY++L++ A ++ L +DM R + PN +T N++L +
Sbjct: 250 LFKEMET-KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + + M+ P++ T NT++ + + ++ + P+
Sbjct: 309 VKEGKLQEANELYKEMITRGI-SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
TF LI Y + D V + K + TY+ +++ F G K E F+
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M + G+ D T+ L++G + G K + K ++ + Y +I K
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + ++ + K +P+ T+++M K+G
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 522
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/416 (20%), Positives = 163/416 (39%), Gaps = 66/416 (15%)
Query: 54 SFSSESAVAAKKRLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAE 113
S + + A L+KE E G+ ++S+ Y S L + L KA W N A
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGI-KSSVVTYNS-------LVRGL---CKAGKW-NDGAL 284
Query: 114 TFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE 173
D V ++ P T+ LL + K G+ + A +++ EM+
Sbjct: 285 LLKDMVSRE-----------------IVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
GI P Y L+ YC + + EA L+ M C PD+ T+++LIK R +
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLM-VRNKCSPDIVTFTSLIKGYCMVKRVDD 386
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
+++++ +R + N VT +I++ G
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQG---------------------------------- 412
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
F G++ + E +++ + G+ P+ T+ IL+ +K + E ++K +
Sbjct: 413 --FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
Y +IE G + F + +G+K + T+ +I+G G +
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+R + A N YN +I A ++ DL ++ + MK D+ + ++ +
Sbjct: 531 LRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 153/354 (43%), Gaps = 11/354 (3%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
A+ +F EM++ +P P + + + ++ Q L ++ GI
Sbjct: 71 DAIALFQEMIRSRPL--PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 128
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
++ +CR A+ L ++ L +PD T++TLIK + L M E
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGY-EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
P+ VT N ++ G ++G +L M E K DV+T +TI+ G +D
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKM-EERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+++ GI T+N L+ K ++ + +++ M + T+N +++
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
F G + +++M G+ + T+ L++GY + + + L + + +
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 425 NVSFYNAVISA-CI--KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++ + ++I C+ + DD M +V++ + ++ ++ T+SI+ + + + G
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGM---KVFRNISKRGLVANAVTYSILVQGFCQSG 417
>gi|224054488|ref|XP_002298285.1| predicted protein [Populus trichocarpa]
gi|222845543|gb|EEE83090.1| predicted protein [Populus trichocarpa]
Length = 575
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 163/355 (45%), Gaps = 8/355 (2%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K+W ++ E L+ Q ++ E ++ L+ GK G A V M G P
Sbjct: 94 KKWDLVSEILEWLQSQHWWDFNEMDFLMLITAYGKLGDFNGAEMVLRSMNGNGYVPNVVS 153
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+TAL+ AY R + A +M+T +P TY ++K V+ +F+ E +++ +
Sbjct: 154 HTALMEAYGRGGRYNNAEAIFRRMQT-SGPEPSALTYQIILKTFVEGNKFKEAEEVFETL 212
Query: 242 DERSVTPNTVTQ---NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
+ +P Q ++++ KAG +++ +V + M E + V T N+++S N
Sbjct: 213 LNKENSPLEPDQKMFHMMIYMQKKAGNYEKARKVFALMAERGVPQSTV-TYNSLMSFETN 271
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
+V + Y++ + G+ P+ ++ +LI AYG+ R ++ +V E M +
Sbjct: 272 YKEVS---KIYDQMQRSGLRPDVVSYALLIKAYGRARREEEALAVFEEMLDAGVRPSHKA 328
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN +++AF+ G + F+ M + D ++ +++ Y NA + +
Sbjct: 329 YNILLDAFAISGMVEQARVVFKSMRRDRCTPDLCSYTTMLSAYVNASDMEGAENFFKRLR 388
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ + NV Y A+I K ++L +M +Y+ M+ + + + + +AY K
Sbjct: 389 QDGLKPNVVTYGALIKGHAKVNNLEKMMEIYEEMQLNSIKANQTILTTIMDAYGK 443
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 95/188 (50%), Gaps = 2/188 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P +Y L+ G++ + E A VF EM++ G+ P+ + Y LL A+ + ++++A V
Sbjct: 288 RPDVVSYALLIKAYGRARREEEALAVFEEMLDAGVRPSHKAYNILLDAFAISGMVEQARV 347
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
M+ C PD+ +Y+T++ A V+A E E ++ + + + PN VT ++ G+
Sbjct: 348 VFKSMRR-DRCTPDLCSYTTMLSAYVNASDMEGAENFFKRLRQDGLKPNVVTYGALIKGH 406
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K ++M + M + + K + + TI+ + WY++ + G+ P+
Sbjct: 407 AKVNNLEKMMEIYEEM-QLNSIKANQTILTTIMDAYGKNKDFGSAVIWYKEMEHHGVPPD 465
Query: 321 TRTFNILI 328
+ NIL+
Sbjct: 466 QKAQNILL 473
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 87/200 (43%), Gaps = 6/200 (3%)
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
+++ + G + E G P + L+ AYG+ Y+ ++ M+
Sbjct: 122 LITAYGKLGDFNGAEMVLRSMNGNGYVPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTSG 181
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM---HAEGMKADTKTFCCLINGYANAGLFH 408
++ TY +++ F + K E FE + ++ D K F +I AG +
Sbjct: 182 PEPSALTYQIILKTFVEGNKFKEAEEVFETLLNKENSPLEPDQKMFHMMIYMQKKAGNYE 241
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
K L ++ + ++ YN+++S + E+ ++Y +M+ RPD +++++
Sbjct: 242 KARKVFALMAERGVPQSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLRPDVVSYALLI 298
Query: 469 EAYAKEGMNDKVYALEQEKL 488
+AY + ++ A+ +E L
Sbjct: 299 KAYGRARREEEALAVFEEML 318
>gi|115445813|ref|NP_001046686.1| Os02g0321000 [Oryza sativa Japonica Group]
gi|113536217|dbj|BAF08600.1| Os02g0321000 [Oryza sativa Japonica Group]
Length = 542
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 156/370 (42%), Gaps = 45/370 (12%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P GTY L+ L ++G+ A V + M+E+ P + YT ++ AYCR+ I EA +
Sbjct: 162 EPDVGTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKL 221
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ +M+ L C P+V TY+ LI+A D +F+ +E + + + P+TVT NI + G
Sbjct: 222 LMAEMERL-GCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGL 280
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ----VDMMER-----WYE- 310
K G + +L ML +P +T + +L+ + + + ++ER WY
Sbjct: 281 CKKGKAKEALELLDVMLGEGL-EPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAG 339
Query: 311 ---------------KFRNF----------GIDPETRTFNILIGAYGKKRMYDKMSSVME 345
K+R GI+P TRTFNILI + + K S
Sbjct: 340 VVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLC---VGGKSSLAKS 396
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
+ L F TYN ++ F G M + + D T+ +I+G
Sbjct: 397 LIHSLGFAANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRER 456
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
F + L ++ +++ + AD + E+ R++ K PD F
Sbjct: 457 KFDAATAC--FLKSLTSGLSMDVLTVLLNRLVYADKIWEINRIF---DGKDFVPDHHVFD 511
Query: 466 IMTEAYAKEG 475
+ + + G
Sbjct: 512 LTIRTFCRVG 521
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 163/353 (46%), Gaps = 17/353 (4%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+AL+ F EML P + L+ + + + +LA ++ ++ G+EP Y+
Sbjct: 116 EALKAFDEMLASG--VAPNASSQNILIKMHARRSEFDLAWELIHK---SGVEPDVGTYST 170
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+A CR I EA+ L+ M NC+P V TY+ +++A R + L +M+
Sbjct: 171 LIAGLCRAGKIVEAWGVLDWMLE-KNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERL 229
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT--CKPDVWTMNTILSVFANKGQV 302
PN VT N+++ FD++E+VL +ES+T KP T N ++ KG+
Sbjct: 230 GCLPNVVTYNVLIRALCDDDKFDEVEQVL---MESSTKDWKPSTVTYNIYMNGLCKKGKA 286
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYG-KKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ G++P T++IL+ R+ D + ++E +L++ YN
Sbjct: 287 KEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIY-LLERSTELKWYAGVVAYNT 345
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
V+ + +MG + + M +G++ +T+TF LI G K + L L
Sbjct: 346 VMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGG---KSSLAKSLIHSLG 402
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
A NV YN ++ L E R+ M+EK+ PD T++I+ + +E
Sbjct: 403 FAANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRE 455
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 132/334 (39%), Gaps = 40/334 (11%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P Y L+ L ++G+ A K F+EM+ G+ P L+ + R S D A+
Sbjct: 96 PNVLCYNTLVNALAEAGREGEALKAFDEMLASGVAPNASSQNILIKMHARRSEFDLAWEL 155
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+++ +PDV TYSTLI G
Sbjct: 156 IHK----SGVEPDVGTYSTLI-----------------------------------AGLC 176
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+AG + VL MLE C+P V T I+ + G++ + + G P
Sbjct: 177 RAGKIVEAWGVLDWMLEK-NCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNV 235
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+N+LI A +D++ V+ + ++ TYN + G AK +
Sbjct: 236 VTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELLDV 295
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M EG++ T+ L+N ++ I + +++L+ V YN V+S+ +
Sbjct: 296 MLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEMGK 355
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ ++ M +K P++ TF+I+ + G
Sbjct: 356 WRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGG 389
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 5/203 (2%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
++P TY + L K G+ + A ++ + M+ EG+EPT ++ LL C +S + +A
Sbjct: 266 WKPSTVTYNIYMNGLCKKGKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAI 325
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L + L V Y+T++ + + ++ I L DM ++ + PNT T NI++
Sbjct: 326 YLLERSTEL-KWYAGVVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRS 384
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
G + ++ S +V T N +L F G++ R I P
Sbjct: 385 LCVGG----KSSLAKSLIHSLGFAANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAP 440
Query: 320 ETRTFNILIGAYGKKRMYDKMSS 342
+ T+ I+I ++R +D ++
Sbjct: 441 DEVTYTIIIDGLCRERKFDAATA 463
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 151/351 (43%), Gaps = 3/351 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F+ + + F QP TY L+ L K G A ++ MV++ EP Y +
Sbjct: 162 EALHLFDKMVGEGF-QPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTI 220
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ ++ ++EA ++M P+V TY+++I ++ + TL +M +
Sbjct: 221 IDCLFKDRQVNEALNIFSEMIA-KGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSK 279
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ PN V ++ K GM V+ M++ +PDV T ++ + ++D
Sbjct: 280 IMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGV-EPDVVTYTALMDGHCLRSEMDEA 338
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
++ ++ G P +++ LI Y K + DK + E M + + TYN +I
Sbjct: 339 DKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHG 398
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
+G + F +M A G D T+ L++ + ++ ++ +A +
Sbjct: 399 LCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPD 458
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ YN VI + +L ++ + K PD T++IM +G+
Sbjct: 459 IQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGL 509
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 135/346 (39%), Gaps = 41/346 (11%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR--NSLIDE 197
+QP T+ L+ L G+ A +F++MV EG +P Y L+ C+ NS
Sbjct: 140 HQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNS---R 196
Query: 198 AFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVL 257
A + L + NC+P+V TY+T+I + ++ +M + ++PN T N ++
Sbjct: 197 AAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSII 256
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
G K + + +++ M++S P+V T++ +G V + + G+
Sbjct: 257 HGLCKFSEWKHVATLMNEMVDSKI-MPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGV 315
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
+P+ T+ L+ + + D+ V
Sbjct: 316 EPDVVTYTALMDGHCLRSEMDEADKV---------------------------------- 341
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
F+ M +G + ++ LINGY K + + ++ N+ YN +I
Sbjct: 342 -FDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLC 400
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
L + ++ M PD T+ I+ + K D+ A+
Sbjct: 401 HVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAM 446
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 143/367 (38%), Gaps = 44/367 (11%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+AL F ML QP P + K+L + + +M GI
Sbjct: 57 EALSSFNRMLHMQP--PPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDE 243
++ ++C + +D F L ++ L + QPD T++TLI+ CV+ E + L+ M
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGH-QPDTATFTTLIRGLCVEGKIGEALH-LFDKMVG 172
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
PN VT ++ G K G R+L M++ C+P+V T NTI+ QV+
Sbjct: 173 EGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQK-NCEPNVITYNTIIDCLFKDRQVN 231
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ + GI P STYN++I
Sbjct: 232 EALNIFSEMIAKGISPNV-----------------------------------STYNSII 256
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
+ KH+ +M + + F L++ G+ V + + +
Sbjct: 257 HGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVE 316
Query: 424 ENVSFYNAVISA-CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
+V Y A++ C+++ ++ E ++V+ M K C P+ ++S + Y K DK
Sbjct: 317 PDVVTYTALMDGHCLRS-EMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMY 375
Query: 483 LEQEKLQ 489
L +E Q
Sbjct: 376 LFEEMCQ 382
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 107/286 (37%), Gaps = 46/286 (16%)
Query: 137 QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLID 196
Q +P TY L+ + + A KVF+ MV +G P Y+ L+ YC+ ID
Sbjct: 312 QRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRID 371
Query: 197 EAFVTLNQMKTLPNCQ----PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVT 252
+A +M CQ P++ TY+TLI R L+ +M P+ VT
Sbjct: 372 KAMYLFEEM-----CQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVT 426
Query: 253 QNIVLGGYGKAGMFDQM-------------------ERVLSGM---------------LE 278
I+L K DQ V+ GM L
Sbjct: 427 YRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLS 486
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
S PDVWT +++ +G + + + + G P+ T+N++ + +
Sbjct: 487 SKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETL 546
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG---DAKHMEYTFEQ 381
+++ M F +ST ++E SD G K + + F Q
Sbjct: 547 SAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFVQ 592
>gi|218199303|gb|EEC81730.1| hypothetical protein OsI_25362 [Oryza sativa Indica Group]
Length = 583
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 155/334 (46%), Gaps = 15/334 (4%)
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
++Y ++ Y R++ +D+A +M+ C+PD Y++LI A A ++ + +
Sbjct: 12 DIYGMMIRLYARHNQVDQARGLFFEMQEW-RCKPDADIYNSLIHAHSRAGQWRWAINIME 70
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
DM ++ P T N V+ G AG + + + M E+ PD+ T N +LS N
Sbjct: 71 DMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGV-GPDLVTHNIVLSALKNG 129
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR--KLQFPWTSS 357
Q ++E + + +T T NI+I K + + MR + + P
Sbjct: 130 AQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVV 189
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
TY +++ ++ G ++ + F+ M AEG+K + + L+ YA+ G+ + ++ L
Sbjct: 190 TYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLI 249
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
K + ++ Y ++++A ++ + V+ +MK+ C+P+ +++ + +AY GM
Sbjct: 250 KKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGML 309
Query: 478 DKVYAL--EQEK---------LQMLLEASGHWQQ 500
+ L E EK + LL A G +Q
Sbjct: 310 KEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQ 343
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 139/293 (47%), Gaps = 10/293 (3%)
Query: 109 NTVAETFS----DHVLKK--QWFQALQVFEMLKEQPFYQPKEG-TYMKLLVLLGKSGQPE 161
N ++TF+ H L K Q +A+++F ++E+ P + TY ++ GQ E
Sbjct: 146 NVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVE 205
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
+ +F+ MV EG++P Y +LL AY + EA N +K +PD+ +Y++L
Sbjct: 206 NCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKK-NGLRPDIVSYTSL 264
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
+ A + + E ++ M + S PN V+ N ++ YG AGM + +L M E
Sbjct: 265 LNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEM-EKDG 323
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
+PDV +++T+L+ Q+ +E E R+ GID T +N I +Y Y+K
Sbjct: 324 IQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKAL 383
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
+ MR+ + TYN +I S +G FE M + + TK F
Sbjct: 384 ELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDM-VDSKVSSTKEF 435
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/412 (19%), Positives = 167/412 (40%), Gaps = 70/412 (16%)
Query: 134 LKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR-- 191
+K Q Y + Y ++ L + Q + AR +F EM E +P ++Y +L+ A+ R
Sbjct: 1 MKNQDNYCARNDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAG 60
Query: 192 ------------------------NSLIDEAFVTLNQMKTLPNCQ--------PDVYTYS 219
N++I+ N K L C+ PD+ T++
Sbjct: 61 QWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHN 120
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
++ A + ++ + ++ M +VT +T T NI++ K G + + + M E
Sbjct: 121 IVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRER 180
Query: 280 AT-CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
T C PDV T +I+ + GQV+ + ++ G+ P +N L+GAY + M+
Sbjct: 181 RTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHR 240
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+ ++ ++K +Y +++ A+ + F +M K + ++ LI
Sbjct: 241 EALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALI 300
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV---------- 448
+ Y +AG+ + + + K I +V + +++AC + + +E +
Sbjct: 301 DAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGID 360
Query: 449 -------------------------YKRMKEKHCRPDSETFSIMTEAYAKEG 475
Y M+E + +PD+ T++I+ +K G
Sbjct: 361 LNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLG 412
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 132/297 (44%), Gaps = 14/297 (4%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL +F ++K+ +P +Y LL G+S QPE AR+VFN+M + +P Y AL
Sbjct: 241 EALAIFNLIKKNGL-RPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNAL 299
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ AY ++ EA L++M+ QPDV + STL+ AC + IET+ + R
Sbjct: 300 IDAYGSAGMLKEAVGLLHEMEK-DGIQPDVVSISTLLAACGRCRQITRIETILEAARSRG 358
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ NTV N + Y G +++ + + M ES KPD T N ++S + G+
Sbjct: 359 IDLNTVAYNSGIKSYLSFGDYEKALELYTSMRES-NVKPDAVTYNILISGSSKLGKYTES 417
Query: 306 ERWYEKFRNFGIDPE------TRTFNILIGAY---GKK--RMYDKMSSVMEYMRKLQFPW 354
R++E + + R +G G K R + S ++EY+
Sbjct: 418 LRFFEDMVDSKVSSTKEFLWTIRWLEESLGPVQRDGSKWIRDWKTASEMIEYLDSSLSSI 477
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
+ T N+V+ G ++M F +M T+ ++ G + K I
Sbjct: 478 SVGTLNHVLNFLGKCGKTENMMKLFYKMVTSCSTVGLSTYAVVLRNLLVVGKWRKYI 534
>gi|168038568|ref|XP_001771772.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676903|gb|EDQ63380.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 614
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 166/366 (45%), Gaps = 19/366 (5%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL+V +K EGTY+ L+ + + + + A ++ M + G+ P+ Y L
Sbjct: 166 EALEVVNEMKAAGVNAANEGTYLALITVCRRQQEGDRALSIYEAMKDAGVIPSVLTYNTL 225
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD----------AMRFELIE 235
++ + +++A+ +M+ +PDV TY+ L+ V A R E
Sbjct: 226 ISCCQQAKRLEDAYRIKAEMEA-SGVKPDVVTYTALMALVVKTGPYRGRSSPAQRLEKAL 284
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
LYQ+M +R++ P+++T N ++ +A + +++ + M+ +A PD +T + IL
Sbjct: 285 QLYQEMQDRNIRPDSITYNTLMFAGAQAKVPEKVLEIYRTMV-AAGVPPDQFTFSFILES 343
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD--KMSSVMEYMRKLQ-- 351
A G++ + +E+ R G+ P+T TFN LI A D K ++ E M+ ++
Sbjct: 344 AAAGGRLKVALEVFEEMRAAGVAPKTNTFNFLIEACASAPYPDAEKAWALFEEMKTIEGV 403
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK--ADTKTFCCLINGYANAGLFHK 409
P + TYN++I A GD +E M G + T TF LI +
Sbjct: 404 VP-NAQTYNHLITASCKGGDNARALKAYELMWNSGYQRAVTTATFNKLIQSASQTEGLES 462
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+ R + Y+ ++ AC +ADDL + + + M+ +P+ +
Sbjct: 463 ALKMYRKMLDAGYKPDAITYSTLVVACNRADDLEQALSISQEMEGLGVKPNQVVQHSLIA 522
Query: 470 AYAKEG 475
AY + G
Sbjct: 523 AYGQAG 528
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 122/283 (43%), Gaps = 30/283 (10%)
Query: 191 RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT 250
R S + EA +N+MK + TY LI C + ++Y+ M + V P+
Sbjct: 160 RCSSLSEALEVVNEMKAAGVNAANEGTYLALITVCRRQQEGDRALSIYEAMKDAGVIPSV 219
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG---------- 300
+T N ++ +A + R+ + M E++ KPDV T ++++ G
Sbjct: 220 LTYNTLISCCQQAKRLEDAYRIKAEM-EASGVKPDVVTYTALMALVVKTGPYRGRSSPAQ 278
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+++ + Y++ ++ I P++ T+N L+ A + ++ +K+ + M P T++
Sbjct: 279 RLEKALQLYQEMQDRNIRPDSITYNTLMFAGAQAKVPEKVLEIYRTMVAAGVPPDQFTFS 338
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA---------GLFH--K 409
++E+ + G K FE+M A G+ T TF LI A+A LF K
Sbjct: 339 FILESAAAGGRLKVALEVFEEMRAAGVAPKTNTFNFLIEACASAPYPDAEKAWALFEEMK 398
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
I V N YN +I+A K D + Y+ M
Sbjct: 399 TIEGV--------VPNAQTYNHLITASCKGGDNARALKAYELM 433
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 134/334 (40%), Gaps = 32/334 (9%)
Query: 141 QPKEGTYMKLLVLLGKSG----------QPELARKVFNEMVEEGIEPTPELYTALLAAYC 190
+P TY L+ L+ K+G + E A +++ EM + I P Y L+ A
Sbjct: 251 KPDVVTYTALMALVVKTGPYRGRSSPAQRLEKALQLYQEMQDRNIRPDSITYNTLMFAGA 310
Query: 191 RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT 250
+ + + E + + + PD +T+S ++++ R ++ ++++M V P T
Sbjct: 311 Q-AKVPEKVLEIYRTMVAAGVPPDQFTFSFILESAAAGGRLKVALEVFEEMRAAGVAPKT 369
Query: 251 VTQNIVLGGYGKA---------GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
T N ++ A +F++M + + G++ P+ T N +++ G
Sbjct: 370 NTFNFLIEACASAPYPDAEKAWALFEEM-KTIEGVV------PNAQTYNHLITASCKGGD 422
Query: 302 VDMMERWYEKFRNFGIDPE--TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
+ YE N G T TFN LI + + + + M + + TY
Sbjct: 423 NARALKAYELMWNSGYQRAVTTATFNKLIQSASQTEGLESALKMYRKMLDAGYKPDAITY 482
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
+ ++ A + D + ++M G+K + LI Y AG + +++ R+ +
Sbjct: 483 STLVVACNRADDLEQALSISQEMEGLGVKPNQVVQHSLIAAYGQAGQWEDAVATFRVLQE 542
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+ Y+ + AC E V KR K
Sbjct: 543 GEEQLTSVSYSIIFDACFGKGG---AEAVLKRTK 573
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 73/180 (40%), Gaps = 40/180 (22%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQP--ELARKVFNEM-VEEGIEPTPELYT 183
AL+VFE ++ PK T+ L+ + P E A +F EM EG+ P + Y
Sbjct: 353 ALEVFEEMRAAGV-APKTNTFNFLIEACASAPYPDAEKAWALFEEMKTIEGVVPNAQTYN 411
Query: 184 ALLAAYCR----------------------------NSLIDEAFVTLNQMKTL------- 208
L+ A C+ N LI A T L
Sbjct: 412 HLITASCKGGDNARALKAYELMWNSGYQRAVTTATFNKLIQSASQTEGLESALKMYRKML 471
Query: 209 -PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFD 267
+PD TYSTL+ AC A E ++ Q+M+ V PN V Q+ ++ YG+AG ++
Sbjct: 472 DAGYKPDAITYSTLVVACNRADDLEQALSISQEMEGLGVKPNQVVQHSLIAAYGQAGQWE 531
>gi|147771903|emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera]
Length = 1313
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 110/476 (23%), Positives = 196/476 (41%), Gaps = 42/476 (8%)
Query: 8 ASLSFSSSLLPSPLPHPHDTKTNKHRAQV-PNFNLIHCSVTSTNKHTSFSSESAVAAKKR 66
+S SL + H + N A+V P F L C ++ + ++++++ +K+
Sbjct: 371 SSXKIDKSLGRNAYSHTQKQRLNPRGARVFPGFKL-QCH----SRTVALPTKTSISRRKK 425
Query: 67 LWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQ--W 124
+Y GV + + S+ N++ L K TV +LK+Q W
Sbjct: 426 -----KYSGVLPSILRALESE----XNIEDTLSSCGKLSPKEQTV-------ILKEQSSW 469
Query: 125 FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+ L+VFE +K Q Y P Y +L +LG++ + + R + EM + G+ PT Y
Sbjct: 470 ERVLRVFEWIKSQEDYVPNVIHYNVVLRVLGRAQKWDELRLCWIEMAKNGVLPTNNTYGM 529
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+ Y + L+ EA + + MK L PD T +T+++ DA F+ + Y+D
Sbjct: 530 LVDVYGKAGLVKEALLWIKHMK-LRGVFPDEVTMNTVVRVLKDAGEFDWADRFYRDW--- 585
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ LG + + D + + SA + + + + ++
Sbjct: 586 ------CVGKVELGDFDLESVADSDDEI-----GSAPVSLKHFLSTELFKIGGRRPISNI 634
Query: 305 MERWYEKFRNFGIDPE-TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
M+ P T T+N LI YGK + V M KL + T+N +I
Sbjct: 635 MDSSNTDGSRH--KPRLTATYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMI 692
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
G E +M G+ DTKT+ ++ YA+ G + R ++ +
Sbjct: 693 YTCGSHGHLSEAETLLTEMEERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLF 752
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+V + AV+ + + + E+E V MK R D + ++ + Y EG+ DK
Sbjct: 753 PDVVTHRAVLHVLCERNMVGEVETVIAEMKRSRVRVDEHSIPVVIKMYVNEGLLDK 808
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 144/341 (42%), Gaps = 3/341 (0%)
Query: 136 EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI 195
E+ P TY L L G + A K + ++ E G+ P + A+L C +++
Sbjct: 712 EERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLFPDVVTHRAVLHVLCERNMV 771
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI 255
E + +MK + D ++ +IK V+ + + ++ + ++ T+
Sbjct: 772 GEVETVIAEMKR-SRVRVDEHSIPVVIKMYVNEGLLDKAK-IFLEEHLLEDELSSRTRVA 829
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
++ Y + G++ + E V G + K DV N ++ + D ++ RN
Sbjct: 830 IIDAYAEKGLWAEAENVFIGKRDLGQ-KKDVVEYNVMVKAYGKAKLYDKAFSLFKGMRNH 888
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G P T+N LI + + D+ ++ M+K+ F T++ VI ++ +G
Sbjct: 889 GTWPNESTYNSLIQMFSGGDLVDEARDILAEMQKMGFKPQCLTFSAVIACYARLGRLPDA 948
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
+E+M G+K + + LING++ G + + R + I+ N ++I A
Sbjct: 949 VGVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRKMDEFGISANQIVLTSLIKA 1008
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
K L + +Y+ MK+ PD + M YA G+
Sbjct: 1009 YSKVGCLEGAKTLYEGMKDLEGGPDIVASNSMINLYADLGL 1049
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 162/390 (41%), Gaps = 41/390 (10%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K + +A +F+ ++ + P E TY L+ + + AR + EM + G +P
Sbjct: 873 KLYDKAFSLFKGMRNHGTW-PNESTYNSLIQMFSGGDLVDEARDILAEMQKMGFKPQCLT 931
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
++A++A Y R + +A +M L +P+ Y +LI + E ++ M
Sbjct: 932 FSAVIACYARLGRLPDAVGVYEEMVRL-GVKPNEVVYGSLINGFSETGNVEEALCYFRKM 990
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM--LESATCKPDVWTMNTILSVFANK 299
DE ++ N + ++ Y K G + + + GM LE PD+ N++++++A+
Sbjct: 991 DEFGISANQIVLTSLIKAYSKVGCLEGAKTLYEGMKDLEGG---PDIVASNSMINLYADL 1047
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G V + ++ R G + +F ++ Y M D+ V + M++ F +++
Sbjct: 1048 GLVSEAKLIFDDLRQKG-SADGVSFATMMYLYKNLGMLDEAIDVADEMKQSGFLRDCASF 1106
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN-------------------- 399
N V+ ++ G +M + + DT TF +
Sbjct: 1107 NKVMACYATNGQLSACGELLHEMISRRILPDTGTFKVMFTVLKKGGLPTEAVTQLESSYQ 1166
Query: 400 ---GYANAGLFHKVISSVRL-ASKLQIAE---------NVSFYNAVISACIKADDLMEME 446
YA + V S+V L A L+ E + SFYN I A + + +
Sbjct: 1167 EGKPYARQAVITSVFSTVGLHAFALESCETFLNAEVDLDSSFYNVAIYAYGASGSIDKAL 1226
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+++ +M+++ PD T+ + Y K GM
Sbjct: 1227 KMFMKMQDEGLEPDLVTYINLAGCYGKAGM 1256
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 134/341 (39%), Gaps = 39/341 (11%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ L GK+G+ + A VF EM++ G+
Sbjct: 652 TYNTLIDLYGKAGRLKDAADVFAEMLKLGV------------------------------ 681
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
D T++T+I C ETL +M+ER ++P+T T NI L Y G
Sbjct: 682 ------AMDTITFNTMIYTCGSHGHLSEAETLLTEMEERGISPDTKTYNIFLSLYADGGN 735
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D + + E PDV T +L V + V +E + + + + +
Sbjct: 736 IDAALKCYRKIREVGLF-PDVVTHRAVLHVLCERNMVGEVETVIAEMKRSRVRVDEHSIP 794
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
++I Y + + DK + + L+ +S T +I+A+++ G E F
Sbjct: 795 VVIKMYVNEGLLDK-AKIFLEEHLLEDELSSRTRVAIIDAYAEKGLWAEAENVFIGKRDL 853
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G K D + ++ Y A L+ K S + N S YN++I D + E
Sbjct: 854 GQKKDVVEYNVMVKAYGKAKLYDKAFSLFKGMRNHGTWPNESTYNSLIQMFSGGDLVDEA 913
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MNDKVYALEQ 485
+ M++ +P TFS + YA+ G + D V E+
Sbjct: 914 RDILAEMQKMGFKPQCLTFSAVIACYARLGRLPDAVGVYEE 954
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 91/225 (40%), Gaps = 9/225 (4%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ V + +K+ F + ++ K++ +GQ ++ +EM+ I P + +
Sbjct: 1086 EAIDVADEMKQSGFLRDC-ASFNKVMACYATNGQLSACGELLHEMISRRILPDTGTFKVM 1144
Query: 186 LAAYCRNSLIDEAFVTLNQ--MKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
+ L EA L + P + V T S + A E ET
Sbjct: 1145 FTVLKKGGLPTEAVTQLESSYQEGKPYARQAVIT-SVFSTVGLHAFALESCETFLN---- 1199
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
V ++ N+ + YG +G D+ ++ M + +PD+ T + + G ++
Sbjct: 1200 AEVDLDSSFYNVAIYAYGASGSIDKALKMFMKMQDEG-LEPDLVTYINLAGCYGKAGMLE 1258
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
++R Y + + I+P F +I AY + +D V + M+
Sbjct: 1259 GLKRIYSQLKYREIEPNESLFKAIIDAYRSAKRHDLAELVSQEMK 1303
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 42/226 (18%), Positives = 89/226 (39%), Gaps = 14/226 (6%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
++ ++ L G + A V +EM + G + ++A Y N + L++M
Sbjct: 1070 SFATMMYLYKNLGMLDEAIDVADEMKQSGFLRDCASFNKVMACYATNGQLSACGELLHEM 1129
Query: 206 ---KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD--ERSVTPNTVTQNIVLGGY 260
+ LP+ ++ L K + +E+ YQ+ R +V + L +
Sbjct: 1130 ISRRILPDTGTFKVMFTVLKKGGLPTEAVTQLESSYQEGKPYARQAVITSVFSTVGLHAF 1189
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ E L+ A D N + + G +D + + K ++ G++P+
Sbjct: 1190 A----LESCETFLN-----AEVDLDSSFYNVAIYAYGASGSIDKALKMFMKMQDEGLEPD 1240
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
T+ L G YGK M + + + ++ + S + +I+A+
Sbjct: 1241 LVTYINLAGCYGKAGMLEGLKRIYSQLKYREIEPNESLFKAIIDAY 1286
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 157/341 (46%), Gaps = 3/341 (0%)
Query: 144 EGTYMKLLVLLGKSGQPELARKVFNEMVEE-GIEPTPELYTALLAAYCRNSLIDEAFVTL 202
+ + L+ L K G+ A VF ++ + I P+ E Y +L+ + L + A+
Sbjct: 752 DSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLF 811
Query: 203 NQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGK 262
+MK C PDV+TY+ + A + + + + LY++M R PNT+T NIV+ G K
Sbjct: 812 YKMKN-AGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVK 870
Query: 263 AGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETR 322
+ D+ + ++ S P WT ++ G+++ ++++E+ ++G P
Sbjct: 871 SNSLDKAIDLYYDLM-SGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCP 929
Query: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
+NIL+ +GK+ + + M K +Y+ +++ +G + FE++
Sbjct: 930 LYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEEL 989
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
G+ D + +ING + + +S I ++ YNA+I A +
Sbjct: 990 KLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMV 1049
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
E ++Y+ ++ K P+ T++ + ++ G D+ YA+
Sbjct: 1050 EEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAV 1090
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 165/407 (40%), Gaps = 5/407 (1%)
Query: 88 RTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWF--QALQVFEMLKEQPFYQPKEG 145
R ++ LE+ K +N + H+L K F +AL+V+ + + +P
Sbjct: 170 RGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGI-KPSLK 228
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+V LGK E + EM G+ P +T + R IDEA+ L +M
Sbjct: 229 TYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRM 288
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
C PDV TY+ LI A +A + + L+ M S P+ VT +L + G
Sbjct: 289 DD-AGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGD 347
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D ++ S M E+ PDV T ++ G+VD + + G+ P T+N
Sbjct: 348 LDAIKEFWSEM-EADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYN 406
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
LI + D+ + M L T+ TY I+ + G++ TFE+M
Sbjct: 407 TLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTN 466
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G+ + + A G + K +A + YN ++ KA + +
Sbjct: 467 GIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDA 526
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLL 492
++ M+E C P+ + + + K D+ + + Q +M L
Sbjct: 527 IKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKL 573
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 155/382 (40%), Gaps = 38/382 (9%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
++P TY+ LL G + ++ ++EM +G P +T L+ A C+ +DEAF
Sbjct: 328 HKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAF 387
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMR-------FELIETL--------------- 237
TL+ MK P+++TY+TLI + R F +E+L
Sbjct: 388 GTLDVMKK-QGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDY 446
Query: 238 -------------YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
++ M + PN V N L + G ++ + +G L+ P
Sbjct: 447 YGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNG-LKKCGLAP 505
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
D T N ++ + G+VD + + G DPE N LI K D+ +
Sbjct: 506 DAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMF 565
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
+ M++++ T TYN ++ G + F+ M A+ +T +F L++
Sbjct: 566 QRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKN 625
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
G + + +++ +V YN VI IK + + ++ +MK K PD T
Sbjct: 626 GEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMK-KVIYPDYVTL 684
Query: 465 SIMTEAYAKEGMNDKVYALEQE 486
+ K+G + + + +E
Sbjct: 685 CTLLPGVIKDGRIEDAFRVAKE 706
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 140/324 (43%), Gaps = 37/324 (11%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L LGKSG+ + ++ EM+ G +P + ++ +++ +D+A
Sbjct: 821 PDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDL 880
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ + + P +TY LI + R E + +++M + PN NI++ G+G
Sbjct: 881 YYDLMS-GDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFG 939
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G + + M++ +PD+ + + ++ G+VD ++E+ + G+DP+
Sbjct: 940 KQGDVETACELFRRMVKEGI-RPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDL 998
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
+N++I G+ + ++ S+ + MR TYN +I G + +E+
Sbjct: 999 VCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEE 1058
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
+ +G++ + T+ LI G++ +G + +
Sbjct: 1059 LQLKGLEPNVFTYNALIRGHSMSGNPDRAYA----------------------------- 1089
Query: 442 LMEMERVYKRMKEKHCRPDSETFS 465
VYK+M CRP++ TF+
Sbjct: 1090 ------VYKKMMVGGCRPNTGTFA 1107
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 145/382 (37%), Gaps = 73/382 (19%)
Query: 98 LERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKS 157
L +K K +NT F ++ +A E +++ F +Y+ L+ LL KS
Sbjct: 147 LMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGY-SYIGLIHLLLKS 205
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
G A KV+ MV EGI+P+ + T
Sbjct: 206 GFCREALKVYRRMVSEGIKPS------------------------------------LKT 229
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
YS L+ A E + L Q+M+ + PN T I + G+AG D+ +L M
Sbjct: 230 YSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRM- 288
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
+ A C PDV T ++ N G+++ + + K + P+
Sbjct: 289 DDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPD----------------- 331
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
TY +++ FSD GD ++ + +M A+G D TF L
Sbjct: 332 ------------------RVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTIL 373
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
I+ G + ++ + K +A N+ YN +I ++ + L E ++ M+
Sbjct: 374 IDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGL 433
Query: 458 RPDSETFSIMTEAYAKEGMNDK 479
+ T+ + + Y K G + K
Sbjct: 434 ETTAYTYILFIDYYGKSGESGK 455
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 70/172 (40%), Gaps = 18/172 (10%)
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T T N ++ R + M V M+K + +TY + + G + E
Sbjct: 122 TETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALE 181
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISS--VRLASKL-------QIAENVSFYNA 431
+M G ++NGY+ GL H ++ S R A K+ I ++ Y+A
Sbjct: 182 KMRKVGF---------VLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSA 232
Query: 432 VISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
++ A K D+ + + + M+ RP+ TF+I + G D+ Y +
Sbjct: 233 LMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGI 284
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 84/226 (37%), Gaps = 5/226 (2%)
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
V+ +++ K + T TI V +G + EK R G ++ LI
Sbjct: 143 VVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLL 202
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
K + V M + TY+ ++ A D + + ++M + G++ +
Sbjct: 203 LKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNI 262
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
TF I AG + ++ +V Y +I A A L + ++ +
Sbjct: 263 YTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLK 322
Query: 452 MKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
MK +PD T+ + + ++ G D + E +EA G+
Sbjct: 323 MKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSE-----MEADGY 363
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 147/343 (42%), Gaps = 14/343 (4%)
Query: 148 MKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKT 207
M+ LV LG+ A+ VF+EM G+ T + +++ CR +D A TL++ +
Sbjct: 123 MRDLVRLGELAS---AQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAE-TLHRRMS 178
Query: 208 LPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFD 267
PDVYTY LI+ R E +++ M R + PN V I++ + K G +
Sbjct: 179 EAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAE 238
Query: 268 QMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
M + M E +PD T N I++ + + R+ G+ P+T T+ L
Sbjct: 239 TMLELHREMRERGV-RPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTL 297
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
I Y K+ D + + M TY +I S G + E +M G+
Sbjct: 298 IDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGL 357
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDLME 444
+ D T+ +I+ + G V + +RL ++Q V YN +++ K +
Sbjct: 358 EPDNTTYTMVIDAFCRKG---DVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKN 414
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEK 487
+ + M PD T++I+ + + K G KV +E+ K
Sbjct: 415 ADMLLNAMINIGVSPDDITYNILLDGHCKHG---KVTDIEELK 454
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 121/270 (44%), Gaps = 15/270 (5%)
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
P+ ++ L++ V + ++ +M R V V+ N ++ G +AG D E +
Sbjct: 114 PEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETL 173
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
M E+ PDV+T ++ G+++ +EK G+ P F ILI A+
Sbjct: 174 HRRMSEAGV-TPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHC 232
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
KK + M + MR+ + TYN ++ D K +M + G++ DT
Sbjct: 233 KKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTV 292
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSF----YNAVISACIKADDLMEM 445
T+ LI+GY + +A +++ +AE V Y A+IS KA +
Sbjct: 293 TYTTLIDGYCKE-------EELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADA 345
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
ERV M E PD+ T++++ +A+ ++G
Sbjct: 346 ERVLGEMMEAGLEPDNTTYTMVIDAFCRKG 375
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 103/244 (42%), Gaps = 5/244 (2%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
K G E ++ EM E G+ P Y A++ CR + A + +M++ +PD
Sbjct: 233 KKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRS-AGLRPDT 291
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
TY+TLI ++ + Q+M V + VT ++ G KAG ERVL
Sbjct: 292 VTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGE 351
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
M+E A +PD T ++ F KG V R ++ +N G P T+N+++ + K
Sbjct: 352 MME-AGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLG 410
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
++ M + TYN +++ G +E E A+G D +
Sbjct: 411 QMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIE---ELKSAKGTVPDLGVYT 467
Query: 396 CLIN 399
++
Sbjct: 468 SIVG 471
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 101/239 (42%), Gaps = 5/239 (2%)
Query: 95 KKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLL 154
+K R K A V T+ H K L++ ++E+ +P TY ++ L
Sbjct: 210 EKMCGRGMKPNAVVFTI--LIDAHCKKGDAETMLELHREMRERGV-RPDAVTYNAIVNGL 266
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
++ + A + EM G+ P YT L+ YC+ +D A + Q D
Sbjct: 267 CRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAM-EIKQNMVAEGVGLD 325
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
TY+ LI A R E + +M E + P+ T +V+ + + G R+L
Sbjct: 326 EVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLK 385
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
M ++ KP V T N I++ F GQ+ + N G+ P+ T+NIL+ + K
Sbjct: 386 EM-QNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCK 443
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 90/220 (40%), Gaps = 3/220 (1%)
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
L A P+ N ++ G++ + +++ ++ G+ +FN +I +
Sbjct: 107 LLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGD 166
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
D ++ M + TY +I+ +G + FE+M GMK + F
Sbjct: 167 LDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTI 226
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
LI+ + G ++ R + + + YNA+++ +A DL + M+
Sbjct: 227 LIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAG 286
Query: 457 CRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
RPD+ T++ + + Y KE D ++Q M+ E G
Sbjct: 287 LRPDTVTYTTLIDGYCKEEELDMAMEIKQ---NMVAEGVG 323
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
Query: 144 EGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLN 203
E TY L+ L K+G+ A +V EM+E G+EP YT ++ A+CR + L
Sbjct: 326 EVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLK 385
Query: 204 QMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKA 263
+M+ +P V TY+ ++ + + + L M V+P+ +T NI+L G+ K
Sbjct: 386 EMQNKGR-KPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKH 444
Query: 264 GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
G +E + S + PD+ +I+ K
Sbjct: 445 GKVTDIEELKS----AKGTVPDLGVYTSIVGEIVKK 476
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 153/351 (43%), Gaps = 5/351 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ K G + A K+ + +G P Y +L+ C+N ID A
Sbjct: 318 EPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALA 377
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
N +P V Y+ LIK C + + + ++ + +M E + + T N+V+ G
Sbjct: 378 LFNAALG-KGLKPTVILYNMLIKGLCQEGLILQALQMM-NEMSENGCSSDIWTYNLVING 435
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K G +++ + PDV+T NT++ + + +++ + K + G+ P
Sbjct: 436 LCKMGCVSDANNLMNDAIAKGYV-PDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTP 494
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ T+N ++ K + + E M + TYN + E+ G
Sbjct: 495 DVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLV 554
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR-LASKLQIAENVSFYNAVISACIK 438
+++ +G+ DT +F +I+G+AN G R + + +++ + YN +I+A +
Sbjct: 555 DEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAE 614
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
DL E+++ M C PD+ T+ +M + + G D Y E ++
Sbjct: 615 KLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIE 665
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 177/428 (41%), Gaps = 39/428 (9%)
Query: 83 GYRSKRTPIKNLKKKLERKAKAKAWVNTVAET---FSDHVLKKQWFQALQVF-------- 131
G++ K + +KL A N +AET + +L+ + A++ +
Sbjct: 35 GFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNSLLEGVYIGAMKSYGRKGKVQE 94
Query: 132 --EMLKEQPFY--QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
++ + FY +P +Y ++ +L +SG + A KVF M GI P +T +
Sbjct: 95 AVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIK 154
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA-MRFELIETLYQDMDERSV 246
++CR A LN M + CQ + Y T++ + R E E L+ DM +
Sbjct: 155 SFCRTKRPHSALRLLNNMVS-QGCQLNAVAYCTVVAGFYEENYRVEAYE-LFNDMLRIGI 212
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P+ T N +L K G + ER+L+ +L+ C +++T N + KG +
Sbjct: 213 FPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMC-SNLFTFNIFIQGLCRKGMLSGAM 271
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME---YMRKL---QFPWTSSTYN 360
+ G+ P+ T+N LI K S+V+E Y+ KL TYN
Sbjct: 272 SMLDSVIREGLTPDVVTYNTLICGLCKN------SNVVEAEKYLHKLVNGGLEPDGFTYN 325
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+I+ + MG ++ E + +G D T+C LING + ++ A
Sbjct: 326 TLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGK 385
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG----- 475
+ V YN +I + +++ ++ M E C D T++++ K G
Sbjct: 386 GLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDA 445
Query: 476 ---MNDKV 480
MND +
Sbjct: 446 NNLMNDAI 453
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 95/230 (41%), Gaps = 7/230 (3%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY---CRNSLID 196
Y P T+ L+ K + E ++ N+M G+ P Y ++L +N +
Sbjct: 457 YVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLM 516
Query: 197 EAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIV 256
E F T+ + C P+ TY+ L ++ A + L ++ + +TP+TV+ +
Sbjct: 517 ETFETMVE----KGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATI 572
Query: 257 LGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG 316
+ G+ G ++ M E T N +++ FA K + M E+ + + G
Sbjct: 573 ISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGG 632
Query: 317 IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
P+T T+ ++I + D + M + F + +T+ VI
Sbjct: 633 CAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCL 682
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 82/194 (42%), Gaps = 2/194 (1%)
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
++ FE + E+ P + TY L L K+G+ A + +E++ +GI P + +++
Sbjct: 516 METFETMVEKGCV-PNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIIS 574
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVT 247
+ N + A+ +M TY+ +I A + + + E L+ +M
Sbjct: 575 GFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCA 634
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMER 307
P+T T +++ G+ G D + L M+E P + T +++ + +V
Sbjct: 635 PDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFI-PSLTTFGRVINCLCVQHRVHEAVD 693
Query: 308 WYEKFRNFGIDPET 321
+ GI PE
Sbjct: 694 IIHFMVHNGIVPEV 707
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 153/378 (40%), Gaps = 38/378 (10%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+ P TY L+ L + G+ + AR + N++ P L+ L+ Y +DEA
Sbjct: 318 FTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAK 373
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+++ C PD++TY+TLI L +M + PN +T I++
Sbjct: 374 AVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDR 433
Query: 260 YGKAGMFDQMERVLS----------------------------------GMLESATCKPD 285
+ K G ++ VL G + S CKPD
Sbjct: 434 FCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPD 493
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
++T N+++ + + Y+ G+ T T+N LI A+ ++ + ++
Sbjct: 494 IFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVN 553
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
M P TYN +I+A G+ + FE M ++G+ + + LING G
Sbjct: 554 DMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTG 613
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ +R + ++ YN++I+ K E ++ +++ + PD+ T++
Sbjct: 614 NIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYN 673
Query: 466 IMTEAYAKEGMNDKVYAL 483
+ + KEGM D + L
Sbjct: 674 TLISWHCKEGMFDDAHLL 691
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 154/413 (37%), Gaps = 65/413 (15%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P +Y +L +L P++ VF EM+ +GI PT + ++ A C + +D A
Sbjct: 179 EPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACA 238
Query: 201 TLNQMK---TLPN-------------------------------CQPDVYTYSTLIKACV 226
L M +PN C PDV T++ I
Sbjct: 239 LLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLC 298
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQ-------------------------------NI 255
+R L M R TPN+ T N
Sbjct: 299 KMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNT 358
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
++ GY G D+ + V+ + S C PD++T NT++ KG + + +
Sbjct: 359 LINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIK 418
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G +P T+ ILI + K+ ++ +V++ M + YN +I A +
Sbjct: 419 GCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDA 478
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
F M ++G K D TF LI G F + + + + N YN +I A
Sbjct: 479 LNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHA 538
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
++ + E ++ M + C D T++ + +A + G +K AL ++ +
Sbjct: 539 FLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMM 591
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 145/351 (41%), Gaps = 8/351 (2%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
++++F+ Q Y Y L+ LG +G+ + + +M +EGI L+ ++
Sbjct: 94 SMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIM 153
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
Y R L +A L M+ + +C+P +Y+ ++ + +++ ++ +M + +
Sbjct: 154 KHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGI 213
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
+P T +V+ D +L M C P+ T++ G+V+ +
Sbjct: 214 SPTVYTFGVVMKALCLVNEVDSACALLKDMTRHG-CVPNAIVYQTLIHALXKVGRVNEVL 272
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ E+ G P+ TFN I K + + +++ M F S TY ++
Sbjct: 273 KLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGL 332
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI--AE 424
MG ++ + F LINGY + G + +V S L +
Sbjct: 333 CRMGKVDEARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEA-KAVMHESMLSVGCGP 387
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++ YN +I K L+ + M+ K C P+ T++I+ + + KEG
Sbjct: 388 DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEG 438
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 35/228 (15%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P T+ L+ L K + E A ++ +M+ EG+ Y L+ A+ R + EA
Sbjct: 491 KPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALK 550
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+N M C D TY+ LIKA A E L++DM + + PN ++ NI++ G
Sbjct: 551 LVNDM-LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGL 609
Query: 261 GKAG--------MFDQMERVLS------GMLESATCK--------------------PDV 286
+ G + D + R L+ L + CK PD
Sbjct: 610 CRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDA 669
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
T NT++S +G D + + G P T+ IL+ + K+
Sbjct: 670 ITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKE 717
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 2/156 (1%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ L ++G E +F +M+ +G+ P L+ CR I A L M
Sbjct: 566 TYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM 625
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
PD+ TY++LI R + L+ + + P+ +T N ++ + K GM
Sbjct: 626 -IHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGM 684
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
FD +LS ++S P+ T ++S F +G
Sbjct: 685 FDDAHLLLSRGVDSGFI-PNEVTWYILVSNFIKEGD 719
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 100/272 (36%), Gaps = 4/272 (1%)
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
Y LI A F+ I+ L M + + +++ YG+AG+ Q R+L M
Sbjct: 113 VYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 172
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
+C+P + N +L V ++ + + + GI P TF +++ A
Sbjct: 173 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNE 232
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
D ++++ M + + Y +I A +G + E+M G D TF
Sbjct: 233 VDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFND 292
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
I+G H+ V N Y ++ + + E + ++
Sbjct: 293 AIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN-- 350
Query: 457 CRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
P+ F+ + Y G D+ A+ E +
Sbjct: 351 --PNVVLFNTLINGYVSRGRLDEAKAVMHESM 380
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 153/345 (44%), Gaps = 22/345 (6%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L SG ++A +F+ M +G+ P Y AL+ N I AFV
Sbjct: 522 EPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFV 581
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKA-CV--DAMRFELIETLYQDMDERSVTPNTVTQNIVL 257
LN M ++ TY+ +IK C+ D + L+ +M +R + N VT N ++
Sbjct: 582 VLNLMGR-NGLFTNIVTYNEMIKGYCILGDPKKAMLV---MNNMLQRGHSANLVTYNTII 637
Query: 258 GGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI 317
GY +G R+L ++ CKPD W+ ++ F +++ + + + G+
Sbjct: 638 KGYCDSGNTTSALRILD-LMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 696
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P T+ LI Y K D +S++E+M++ TYN +I + + E
Sbjct: 697 CPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE 756
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVISSVRLASKLQIAENVSFYN 430
+ M EG+ + T+ +I+G G +F+K+I L N+ Y+
Sbjct: 757 LCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLP-------NLLTYS 809
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++I A + + E E ++ ++ PD T+ M EAY G
Sbjct: 810 SLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSG 854
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 145/369 (39%), Gaps = 37/369 (10%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP Y ++ L K G A + ++ E + P YT+++ +CR +D A
Sbjct: 382 QPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQ 441
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
NQM C+P+ TYSTLI D+ R L ++M + P T +
Sbjct: 442 VFNQMAK-EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 500
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
G ++ R+ M ++ C+P+V+T ++S G + + + + G+ P
Sbjct: 501 CDMGCYEDAWRLFVDM-KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 559
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T T+N LI + R V+ M + TYN +I+ + +GD K
Sbjct: 560 TVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMN 619
Query: 381 QMHAEGMKADTKTFCCLINGYANAG----------------------LFHKVISSVRLAS 418
M G A+ T+ +I GY ++G + ++I S
Sbjct: 620 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 679
Query: 419 KLQ-------------IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
K++ + N Y A+I K + L + + MK CRP+ +T++
Sbjct: 680 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 739
Query: 466 IMTEAYAKE 474
++ K+
Sbjct: 740 VLIHGLTKQ 748
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 109/285 (38%), Gaps = 26/285 (9%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL++F + EQ P TY L+ LG+ G+ E A +F E+ G+ P Y ++
Sbjct: 789 ALEMFNKMIEQGCL-PNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMI 847
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
AY + ++ AF L +M CQP ++TY LIK ++ Y D+R
Sbjct: 848 EAYIMSGKVEHAFNFLGRMIK-AGCQPTLWTYGVLIKG---------LKNEYLLADQRLA 897
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
V N +G V+S L V N ++S + G
Sbjct: 898 ALPDVVPNC---SFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAG------ 948
Query: 307 RWYE------KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
RW+E + G+ P+ +N L+ + + R D V ++M + Y
Sbjct: 949 RWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYK 1008
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
+I A + K TFE M D LI+G G
Sbjct: 1009 ELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 1053
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 90/218 (41%), Gaps = 14/218 (6%)
Query: 267 DQMERVLS--GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
+ M R +S ML + + ++ + +L + G + Y + + G+ P +
Sbjct: 329 EAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIY 388
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
N +I A K ++M+ + + + + TY ++I D F QM
Sbjct: 389 NAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAK 448
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVR---LASKLQIAENVSFYNAVISACIKADD 441
EG + +T T+ LING ++G ++ +R L L A + +I+ C D
Sbjct: 449 EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCT--GPIIALC----D 502
Query: 442 LMEME---RVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ E R++ MK K C P+ T++ + G+
Sbjct: 503 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGL 540
>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 567
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 153/339 (45%), Gaps = 35/339 (10%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
LL L ++G+ A V+ +M+ GI P YT ++ AYC+ +DEAF + +M+
Sbjct: 227 LLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMER-S 285
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
C+P+V TY++LI V + + M E+ + N+ T +++ GY K G +Q
Sbjct: 286 CCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQA 345
Query: 270 ERVLSGMLES--------------ATC--------------------KPDVWTMNTILSV 295
E++ M+E A C K + N++++
Sbjct: 346 EKLFGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLING 405
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
+ G V+ +++ + P++ +N L+ + K+ + K + + M +T
Sbjct: 406 YCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFT 465
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
TYN +++ +G +H + + MH G+ + T+C L++ + G F + + +
Sbjct: 466 VVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWK 525
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
A ++++ YN +I K + L++ + ++ +MKE
Sbjct: 526 DALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKE 564
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/373 (19%), Positives = 151/373 (40%), Gaps = 44/373 (11%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+L+ F++ +QP ++P +Y K++ +L ++ + R NE+V
Sbjct: 115 SLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELV--------------- 159
Query: 187 AAYCRNSLI-----DEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
C+N+ I DE + P + ++K + + ++ +M
Sbjct: 160 -VLCKNNYIASAVWDELVSVYREFSFSPT------VFDMILKVYAEKGMTKFALCVFDNM 212
Query: 242 DERSVTP-----NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
+ P N++ N+V G + + + G+L PD+++ +++ +
Sbjct: 213 GKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGIL------PDIFSYTIMVNAY 266
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
+G+VD + ++ +P T+N LI Y V+ M + P S
Sbjct: 267 CKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENS 326
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
TY +I+ + G + E F M + + D + LI+ Y AG +V ++R+
Sbjct: 327 RTYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHVYGVLIHAYCTAG---RVDDALRI 383
Query: 417 AS---KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
K+ + N N++I+ K + + V MK+ + +PDS ++ + + + K
Sbjct: 384 RDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCK 443
Query: 474 EGMNDKVYALEQE 486
+ K + L E
Sbjct: 444 QEDFIKAFKLCDE 456
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 148/321 (46%), Gaps = 24/321 (7%)
Query: 166 VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC 225
V NEMV+ G++P YT ++ A+C+ + A L +M ++ C P+V T++ L+K
Sbjct: 191 VVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSM-GCTPNVLTFTALVKGF 249
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY-------GKAGMFDQMERVLSGMLE 278
+ + +++ M + P+T++ N+++ G G F+ M+R + +L
Sbjct: 250 FEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKR--NALLP 307
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
+AT T +T++ F+N G +D + + ++ G P + +I KK M+D
Sbjct: 308 NAT------TYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFD 361
Query: 339 KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+ S+++ M P + T+N +I D G F M G + +T+ L+
Sbjct: 362 QAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELL 421
Query: 399 NGYANAG----LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
+G G F VI + +L + + N + C++ ++ + RM
Sbjct: 422 HGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAML----LLGRMMV 477
Query: 455 KHCRPDSETFSIMTEAYAKEG 475
+ +PD+ TF+ + AY KEG
Sbjct: 478 QGIQPDAFTFNAIIHAYCKEG 498
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 139/334 (41%), Gaps = 12/334 (3%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ + G+ A +++ MV+EG P+ Y L+ C + A
Sbjct: 237 PNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDF 296
Query: 202 LNQMK---TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
N MK LPN TYSTL+ +A + ++ +M PN V ++
Sbjct: 297 FNSMKRNALLPN----ATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMID 352
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
K MFDQ E ++ ML C P+ T NT++ + G+V + R G
Sbjct: 353 VLCKKMMFDQAESLIDKMLMD-NCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCH 411
Query: 319 PETRTFN-ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P RT+N +L G + + D + V+E + F + TYN VI M KH
Sbjct: 412 PNDRTYNELLHGLFREGNHKDAFAMVIEMLNN-GFELSLVTYNTVINCLCQMCMRKHAML 470
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVIS-AC 436
+M +G++ D TF +I+ Y G + + + NV Y +IS C
Sbjct: 471 LLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELC 530
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
+ M + K + E C P+ T++++ A
Sbjct: 531 NQGKLSNAMVYLLKMLYEGIC-PNEATWNVLVRA 563
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 153/401 (38%), Gaps = 34/401 (8%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL+ F + P Y LL L + V++ M + G++P Y L
Sbjct: 51 RALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLL 110
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE-----LIETL--- 237
+ A C+N +D A L++M C PD ++ T++ R E L ET+
Sbjct: 111 IRALCQNDRVDAARKMLDEMSR-KGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQ 169
Query: 238 ----------------------YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
+M +R + PN VT ++ + KA +L+
Sbjct: 170 ASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILAR 229
Query: 276 MLESATCKPDVWTMNTILSVFANKGQV-DMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
M+ S C P+V T ++ F G+V D + W+ G P T ++N+LI
Sbjct: 230 MV-SMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDE-GWAPSTISYNVLIRGLCCI 287
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
M++ ++TY+ +++ FS+ GD + +M + G K + +
Sbjct: 288 GDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVY 347
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
+I+ +F + S + N +N +I + V+ M+
Sbjct: 348 TNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRR 407
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
C P+ T++ + +EG + +A+ E L E S
Sbjct: 408 NGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELS 448
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 98/254 (38%), Gaps = 18/254 (7%)
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
VD +++ L Q+M R V +G + +AG D+ + + P
Sbjct: 14 VDGVQYAL-----QEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPG 68
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
V N +L + V + Y+ R G+DP T+N+LI A + D +++
Sbjct: 69 VRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLD 128
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA- 404
M + ++ ++ +G + A G A+T N +A
Sbjct: 129 EMSRKGCHPDEVSHGTIVSGMCKLGRVE---------EARGFLAETVPVQASYNAVVHAL 179
Query: 405 -GLFH--KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
G F +V S V + + NV Y ++ A KA +L + RM C P+
Sbjct: 180 CGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNV 239
Query: 462 ETFSIMTEAYAKEG 475
TF+ + + + ++G
Sbjct: 240 LTFTALVKGFFEDG 253
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 4/178 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL VF ++ + P + TY +LL L + G + A + EM+ G E + Y +
Sbjct: 397 RALNVFHGMRRNGCH-PNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTV 455
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ + A + L +M + QPD +T++ +I A + + L M+ +
Sbjct: 456 INCLCQMCMRKHAMLLLGRM-MVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVN 514
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL-SVFANKGQV 302
N V I++ G L ML C P+ T N ++ ++F N G +
Sbjct: 515 CPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGIC-PNEATWNVLVRAIFTNIGTI 571
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 155/368 (42%), Gaps = 6/368 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W +VF + E+ +P Y L+ L K G+ + A V + MV G+EP Y
Sbjct: 200 RWEDVGKVFVEMSEKGI-EPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTY 258
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM- 241
L+ C+ + EA L +M PDV TY+TLIK D + + L ++M
Sbjct: 259 NVLINCMCKEGSVKEAIGVLKKMSE-KGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV 317
Query: 242 -DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
+ V PN VT N V+ G G Q +V M+E C ++ T N ++
Sbjct: 318 RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV-RAMMEETGCMVNLVTYNLLIGGLLRVH 376
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+V ++ + G++P++ T++ILI + K D+ ++ MR Y
Sbjct: 377 KVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYI 436
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
++ A + G + F +M D + +I+G AG ++
Sbjct: 437 PLLVAMCEQGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDE 495
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+ + Y+ VI+ K+ D+ V K+M PD F + + Y+ +G +KV
Sbjct: 496 GLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKV 555
Query: 481 YALEQEKL 488
L +E +
Sbjct: 556 LELIREMI 563
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 143/337 (42%), Gaps = 15/337 (4%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL------YTALLAAYCRNSLIDEAF 199
+Y +L L + G + A + M +EP P YT L+ A C + L D+A
Sbjct: 79 SYNTVLTALCRRGHHDRAGALLRAM---SLEPHPACRPNAVSYTVLMRALCADRLADQAV 135
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L M++ + DV TY TLI+ DA + L +M E + PN V + +L G
Sbjct: 136 GLLRSMRS-AGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQG 194
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
Y K+G ++ + +V M E +PDV ++ G+ + G++P
Sbjct: 195 YCKSGRWEDVGKVFVEMSEKGI-EPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
T+N+LI K+ + V++ M + TYN +I+ SD+ + +
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313
Query: 380 EQMHAEG---MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
E+M G +K + TF +I G + G + + + N+ YN +I
Sbjct: 314 EEM-VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGL 372
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
++ + + + M PDS T+SI+ + + K
Sbjct: 373 LRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCK 409
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 150/339 (44%), Gaps = 9/339 (2%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P Y LL KSG+ E KVF EM E+GIEP +YT L+ + C+ +A
Sbjct: 182 EPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHG 241
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
++ M +P+V TY+ LI C + E I L + M E+ V P+ VT N ++ G
Sbjct: 242 VMDMM-VRRGLEPNVVTYNVLINCMCKEGSVKEAIGVL-KKMSEKGVAPDVVTYNTLIKG 299
Query: 260 YGKAGMFDQMERVLSGMLESAT-CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
D+ +L M+ KP+V T N+++ + G++ + G
Sbjct: 300 LSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCM 359
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
T+N+LIG + K +M+ M L S TY+ +I+ F M E
Sbjct: 360 VNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDL 419
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL--QIAENVSFYNAVISAC 436
M G++ + + L+ G+ + + L +++ +V Y+ +I
Sbjct: 420 LSTMRDRGIEPELFHYIPLLVAMCEQGMMER---ARNLFNEMDNNFPLDVVAYSTMIHGA 476
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
KA DL + + K + ++ PD+ T+SI+ +AK G
Sbjct: 477 CKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSG 515
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 102/255 (40%), Gaps = 10/255 (3%)
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM-LE-SATCKPDVWTMNTILSVFAN 298
+D + V+ N VL + G D+ +L M LE C+P+ + ++
Sbjct: 68 LDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCA 127
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
D R+ G+ + T+ LI DK +M M +
Sbjct: 128 DRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVV 187
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
Y+++++ + G + + F +M +G++ D + LI+ G K + +
Sbjct: 188 YSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMV 247
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ + NV YN +I+ K + E V K+M EK PD T++ + +G++D
Sbjct: 248 RRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI-----KGLSD 302
Query: 479 KVYALEQEKLQMLLE 493
LE ++ LLE
Sbjct: 303 ---VLEMDEAMWLLE 314
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 150/343 (43%), Gaps = 16/343 (4%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y+P T+ L+ L + A + + MV+ G +P Y A++ C+ D A
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
LN+M+ + +V YST+I + + L+ +M+ + V PN +T + ++
Sbjct: 239 NLLNKMEA-AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
G + R+LS M+E P++ T + ++ F KG++ E+ YE+ IDP
Sbjct: 298 LCNYGRWSDASRLLSDMIERKI-NPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP 356
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYM-RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
T++ LI + + ++E M RK P TYN +I F
Sbjct: 357 NIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLP-NVVTYNTLINGFCKAKRVDKGMEL 415
Query: 379 FEQMHAEGMKADTKTFCCLINGY------ANAGLFHKVISSVRLASKLQIAENVSFYNAV 432
F +M G+ +T T+ LI+G+ NA + K + SV + N+ YN +
Sbjct: 416 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV------GVHPNILTYNIL 469
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ K L + V++ ++ PD T++IM E K G
Sbjct: 470 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 141/339 (41%), Gaps = 8/339 (2%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y+P T LL + A + ++MVE G +P +T L+ ++ EA
Sbjct: 144 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV 203
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+++M CQPD+ TY ++ +L L M+ + N V + V+
Sbjct: 204 ALIDRM-VQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS 262
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K D + + M E+ +P+V T ++++S N G+ R I+P
Sbjct: 263 LCKYRHEDDALNLFTEM-ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINP 321
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF---SDMGDAKHME 376
TF+ LI A+ KK K + E M K TY+++I F +G+AK M
Sbjct: 322 NLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQM- 380
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
E M + + T+ LING+ A K + R S+ + N Y +I
Sbjct: 381 --LELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF 438
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+A D + V+K+M P+ T++I+ + K G
Sbjct: 439 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 477
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 138/319 (43%), Gaps = 10/319 (3%)
Query: 57 SESAVAAKKRLWKEGEYPG-VSETSIPGYRSKRTPIK---NLKKKLERKAKAKAWVNTVA 112
+ AVA R+ + G P V+ ++ KR NL K+E AK +A V +
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKME-AAKIEANV-VIY 256
Query: 113 ETFSDHVLK-KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMV 171
T D + K + AL +F + E +P TY L+ L G+ A ++ ++M+
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEM-ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 172 EEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRF 231
E I P ++AL+ A+ + + +A +M + P+++TYS+LI R
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIK-RSIDPNIFTYSSLINGFCMLDRL 374
Query: 232 ELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNT 291
+ + + M + PN VT N ++ G+ KA D+ + M + V T T
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV-TYTT 433
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
++ F D + +++ + G+ P T+NIL+ K K V EY+++
Sbjct: 434 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 493
Query: 352 FPWTSSTYNNVIEAFSDMG 370
TYN +IE G
Sbjct: 494 MEPDIYTYNIMIEGMCKAG 512
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 121/280 (43%), Gaps = 7/280 (2%)
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
P + +S L+ A +F+L+ + + M+ ++ N T NI++ + + +
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
L M++ +PD+ T+N++L+ F + ++ ++ G P+T TF LI
Sbjct: 136 LGKMMKLGY-EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLF 194
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
+ ++++ M + TY V+ GD +M A ++A+
Sbjct: 195 LHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVV 254
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDLMEMERVY 449
+ +I+ + ++ L ++++ + NV Y+++IS + R+
Sbjct: 255 IYSTVIDSLCK---YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLL 311
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
M E+ P+ TFS + +A+ K+G K L +E ++
Sbjct: 312 SDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIK 351
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 75/206 (36%), Gaps = 35/206 (16%)
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
L G++ + P + + +LS A + D++ + EK GI T+NILI +
Sbjct: 65 LFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFC 124
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
+ +++ M KL + T N+++ F +QM G K DT
Sbjct: 125 RCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTV 184
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
TF LI+G L +K +V L RM
Sbjct: 185 TFTTLIHGLF---LHNKASEAVALID--------------------------------RM 209
Query: 453 KEKHCRPDSETFSIMTEAYAKEGMND 478
++ C+PD T+ + K G D
Sbjct: 210 VQRGCQPDLVTYGAVVNGLCKRGDTD 235
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ ++ + A+ VF +MV G+ P Y LL C+N + +A V +
Sbjct: 430 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 489
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFEL 233
+ +PD+YTY+ +I+ A ++++
Sbjct: 490 QR-STMEPDIYTYNIMIEGMCKAGKWKM 516
>gi|255551975|ref|XP_002517032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543667|gb|EEF45195.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 875
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 178/423 (42%), Gaps = 47/423 (11%)
Query: 80 SIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQ--WFQALQVFEMLKEQ 137
SIP IKNL + L K W +T++ +LK+Q W +A+++FE K +
Sbjct: 144 SIPSILEALETIKNLDEAL------KPWEDTLSNKERSIILKEQCSWERAMEIFEWFKSR 197
Query: 138 PFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDE 197
Y+ Y ++ +LGK+ Q + NEM + I P Y L+ Y + L ++
Sbjct: 198 GCYELNVIHYNIMIRILGKAKQWRYLECLCNEMSFKRISPINSTYGTLIDVYSKGGLREK 257
Query: 198 AFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER------------- 244
A L +M +PD T +++ A F+ E ++ R
Sbjct: 258 ALDWLEKMNK-QGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSLREALRHKVTGKASV 316
Query: 245 --------SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
V+ ++ T N ++ YGKAG + + + ML P T NT++ +
Sbjct: 317 RVENERQMDVSLSSHTYNTMIDTYGKAGQIKEASDIFAEMLRKRIL-PTTVTFNTMIHIC 375
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
N+GQ++ + +K P+TRT+NILI + K + +S + M+K Q
Sbjct: 376 GNQGQLEEVALLMQKMEELRCPPDTRTYNILIFIHAKHNDINMAASYFKRMKKDQLQPDL 435
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
+Y ++ AFS E +M +G++ D T L Y AG+ K S
Sbjct: 436 VSYRTLLYAFSIRHMVNDAENLVSEMDEKGIEIDEYTQSALTRMYIEAGMLEK---SWLW 492
Query: 417 ASKLQIAENVS--FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET-----FSIMTE 469
+ +A N+S Y+A I A + + E RV+ CR + F++M +
Sbjct: 493 FWRFHLAGNMSSECYSANIDAYGERGHVKEAARVFA------CRLEQNKLTVLEFNVMIK 546
Query: 470 AYA 472
AY
Sbjct: 547 AYG 549
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/399 (20%), Positives = 157/399 (39%), Gaps = 70/399 (17%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY ++ GK+GQ + A +F EM+ + I PT + ++ ++E + + +M
Sbjct: 332 TYNTMIDTYGKAGQIKEASDIFAEMLRKRILPTTVTFNTMIHICGNQGQLEEVALLMQKM 391
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ L C PD TY+ LI + + ++ M + + P+ V+ +L + M
Sbjct: 392 EEL-RCPPDTRTYNILIFIHAKHNDINMAASYFKRMKKDQLQPDLVSYRTLLYAFSIRHM 450
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF------------- 312
+ E ++S M E + D +T + + ++ G ++ W+ +F
Sbjct: 451 VNDAENLVSEMDEKGI-EIDEYTQSALTRMYIEAGMLEKSWLWFWRFHLAGNMSSECYSA 509
Query: 313 ---------------RNFGIDPETRT-----FNILIGAYGKKRMYDKMSSVME------- 345
R F E FN++I AYG + Y+K + +
Sbjct: 510 NIDAYGERGHVKEAARVFACRLEQNKLTVLEFNVMIKAYGFGKNYEKACDLFDSMESHGV 569
Query: 346 -------------------------YMRKLQFPWTSST---YNNVIEAFSDMGDAKHMEY 377
Y++K+Q S Y VI +F +G + E
Sbjct: 570 VPDKCSYSSLVQILASADLPDKAKHYLKKMQEAGLVSDCVQYCAVISSFVKLGKLEMAEE 629
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
+++M +K D + LIN +A++G + IS + + N YN++I
Sbjct: 630 VYKEMVGFDVKPDIIVYGVLINAFADSGCVKEAISYIDAMKGAGLPGNTVIYNSLIKLYT 689
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
K L E + YK ++ P++ + + M + Y+++ M
Sbjct: 690 KVGYLREAQETYKLLQSSDVGPETYSSNCMIDLYSEQSM 728
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 140/314 (44%), Gaps = 4/314 (1%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K + +A +F+ ++ P + +Y L+ +L + P+ A+ +M E G+
Sbjct: 552 KNYEKACDLFDSMESHGVV-PDKCSYSSLVQILASADLPDKAKHYLKKMQEAGLVSDCVQ 610
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y A+++++ + ++ A +M + +PD+ Y LI A D+ + + M
Sbjct: 611 YCAVISSFVKLGKLEMAEEVYKEMVGF-DVKPDIIVYGVLINAFADSGCVKEAISYIDAM 669
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ NTV N ++ Y K G + + +L+S+ P+ ++ N ++ +++ +
Sbjct: 670 KGAGLPGNTVIYNSLIKLYTKVGYLREAQETYK-LLQSSDVGPETYSSNCMIDLYSEQSM 728
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
V E +E + G D T+ +++ Y + +++ + + MR+L +YNN
Sbjct: 729 VKPAEEIFESMKRKG-DANEFTYAMMLCMYKRLGWFEQAIQIAKQMRELGLLTYLLSYNN 787
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
V+ ++ G K TF++M G++ D TF L G+ + + + +K
Sbjct: 788 VLGLYALDGRFKEAVGTFKEMVGAGIQPDDCTFKSLGIVLVKCGISKQAVGKLEATTKKD 847
Query: 422 IAENVSFYNAVISA 435
+ + A +SA
Sbjct: 848 RHSGLQTWLAALSA 861
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 117/266 (43%), Gaps = 16/266 (6%)
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
+V Y+ +I+ A ++ +E L +M + ++P T ++ Y K G+ ++ L
Sbjct: 203 NVIHYNIMIRILGKAKQWRYLECLCNEMSFKRISPINSTYGTLIDVYSKGGLREKALDWL 262
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
M + +PD TM ++ ++ G+ E +++K+ + +
Sbjct: 263 EKMNKQGM-EPDEVTMGIVVQMYKKAGEFQKAEEFFKKWS--------------LREALR 307
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
++ K S +E R++ +S TYN +I+ + G K F +M + + T T
Sbjct: 308 HKVTGKASVRVENERQMDVSLSSHTYNTMIDTYGKAGQIKEASDIFAEMLRKRILPTTVT 367
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
F +I+ N G +V ++ +L+ + YN +I K +D+ +KRMK
Sbjct: 368 FNTMIHICGNQGQLEEVALLMQKMEELRCPPDTRTYNILIFIHAKHNDINMAASYFKRMK 427
Query: 454 EKHCRPDSETFSIMTEAYAKEGM-ND 478
+ +PD ++ + A++ M ND
Sbjct: 428 KDQLQPDLVSYRTLLYAFSIRHMVND 453
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 130/323 (40%), Gaps = 4/323 (1%)
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
G+ G + A +VF +E+ E + ++ AY ++A + M++ PD
Sbjct: 515 GERGHVKEAARVFACRLEQNKLTVLE-FNVMIKAYGFGKNYEKACDLFDSMES-HGVVPD 572
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
+YS+L++ A + + + M E + + V V+ + K G + E V
Sbjct: 573 KCSYSSLVQILASADLPDKAKHYLKKMQEAGLVSDCVQYCAVISSFVKLGKLEMAEEVYK 632
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
M+ KPD+ +++ FA+ G V + + + G+ T +N LI Y K
Sbjct: 633 EMV-GFDVKPDIIVYGVLINAFADSGCVKEAISYIDAMKGAGLPGNTVIYNSLIKLYTKV 691
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
+ + ++ + + N +I+ +S+ K E FE M +G A+ T+
Sbjct: 692 GYLREAQETYKLLQSSDVGPETYSSNCMIDLYSEQSMVKPAEEIFESMKRKG-DANEFTY 750
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
++ Y G F + I + +L + + YN V+ E +K M
Sbjct: 751 AMMLCMYKRLGWFEQAIQIAKQMRELGLLTYLLSYNNVLGLYALDGRFKEAVGTFKEMVG 810
Query: 455 KHCRPDSETFSIMTEAYAKEGMN 477
+PD TF + K G++
Sbjct: 811 AGIQPDDCTFKSLGIVLVKCGIS 833
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 71/367 (19%), Positives = 141/367 (38%), Gaps = 36/367 (9%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ + K +A F M ++ ++P Y LL A+ ++++A
Sbjct: 398 PDTRTYNILIFIHAKHNDINMAASYFKRMKKDQLQPDLVSYRTLLYAFSIRHMVNDAENL 457
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDA----------MRFELI-----ETLYQDMD---E 243
+++M + D YT S L + ++A RF L E ++D E
Sbjct: 458 VSEMDE-KGIEIDEYTQSALTRMYIEAGMLEKSWLWFWRFHLAGNMSSECYSANIDAYGE 516
Query: 244 RS------------VTPNTVTQ---NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
R + N +T N+++ YG +++ + M ES PD +
Sbjct: 517 RGHVKEAARVFACRLEQNKLTVLEFNVMIKAYGFGKNYEKACDLFDSM-ESHGVVPDKCS 575
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
++++ + A+ D + + +K + G+ + + +I ++ K + V + M
Sbjct: 576 YSSLVQILASADLPDKAKHYLKKMQEAGLVSDCVQYCAVISSFVKLGKLEMAEEVYKEMV 635
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
Y +I AF+D G K + M G+ +T + LI Y G
Sbjct: 636 GFDVKPDIIVYGVLINAFADSGCVKEAISYIDAMKGAGLPGNTVIYNSLIKLYTKVGYLR 695
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ + +L + N +I + + E +++ MK K + T+++M
Sbjct: 696 EAQETYKLLQSSDVGPETYSSNCMIDLYSEQSMVKPAEEIFESMKRKG-DANEFTYAMML 754
Query: 469 EAYAKEG 475
Y + G
Sbjct: 755 CMYKRLG 761
>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Brachypodium distachyon]
Length = 663
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 156/358 (43%), Gaps = 39/358 (10%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY + + L +S + EL +++ +M + G P + C+ + + +A + +M
Sbjct: 230 TYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKM 289
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVT------------- 252
+T PDV TY T++ D +F L+++M +R + P+ +
Sbjct: 290 RT-KGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNK 348
Query: 253 ----------------------QNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMN 290
N ++ G+ +AG D+ +++S M + C+PD+ T N
Sbjct: 349 VDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFM-RTNGCEPDIVTYN 407
Query: 291 TILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK-MSSVMEYMRK 349
+L+ + G ++ E+ K G++P+ ++N L+ K DK + V ++M
Sbjct: 408 ILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEV 467
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
F T S N +I+AF K F++M +GM+AD T+ LING + G ++
Sbjct: 468 GGFCDTVSC-NILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNL 526
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
QI NV+ YN ++ K + ++ M +K PD+ TF+ +
Sbjct: 527 AEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTL 584
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 142/392 (36%), Gaps = 54/392 (13%)
Query: 108 VNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
VN V SD A++ + + +P + + L+ LL G L +
Sbjct: 93 VNLVVRGLSDSE------TAVRFYWWAESRPGFDHSQFAIAYLVSLLFMDGNFALLSEFL 146
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
+ +G+ LY LL+ Y R D T ++M + C+ Y+ I V
Sbjct: 147 GRVKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDEM-VMSGCREFGVDYNRYIGVLVK 205
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
F+L+E Y + T + + ++ + ++ +L M + C PD+W
Sbjct: 206 NCCFDLVEKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDM-DKLGCSPDIW 264
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
N + + ++ + EK R G P+
Sbjct: 265 ACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDV-------------------------- 298
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
TY V+ D +E+M +K D + LI G
Sbjct: 299 ---------VTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKN--- 346
Query: 408 HKVISSVRLASK---LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
+KV + LAS+ L I +V YNA+IS +A + + ++ M+ C PD T+
Sbjct: 347 NKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTY 406
Query: 465 SIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
+I+ Y GM +K EKL +E SG
Sbjct: 407 NILLNHYCTIGMMEKA-----EKLIRKMETSG 433
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 102/251 (40%), Gaps = 4/251 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY LL G E A K+ +M G+ P Y LL C+ +D+AF
Sbjct: 400 EPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFA 459
Query: 201 TL-NQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+ + M+ C D + + LI A + + L+++M + + + VT ++ G
Sbjct: 460 FVSDHMEVGGFC--DTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLING 517
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
G ++ E + ML +A P+V N +L G + + + P
Sbjct: 518 LFSVGYYNLAEELFEQML-NAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSP 576
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+T TFN LI GK+ + ++ + MR + T+ +I D G + +
Sbjct: 577 DTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVW 636
Query: 380 EQMHAEGMKAD 390
E M G+ D
Sbjct: 637 EYMMENGIILD 647
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 153/374 (40%), Gaps = 19/374 (5%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
L++ W L+V + Y P + L+ K G AR VF+E+ + G+ PT
Sbjct: 123 LERSWAFYLEVLD-----SGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTV 177
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+ L++ C+ ++E F M++ C PDV+T+S LI R + L+
Sbjct: 178 VSFNTLISGCCKAGAVEEGFRLKGVMESERVC-PDVFTFSALINGLCKEGRLDEGSLLFD 236
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
+M + + PN VT +++ G K G D + ML +PD+ T N +++
Sbjct: 237 EMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGV-RPDLVTYNALINGLCKV 295
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL---QFPWTS 356
G + R + G+ P+ TF LI K Y M S +E R++
Sbjct: 296 GDLKEARRLVNEMSASGLRPDRITFTTLIDGCCK---YGDMESALEIKRRMVEEGIELDD 352
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
+ +I G E M + G K D T+ +++ + G V +L
Sbjct: 353 VAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKG---NVXMGFKL 409
Query: 417 ASKLQI---AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
++Q V YNA+++ K + + + M P+ T++I+ E ++K
Sbjct: 410 LKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSK 469
Query: 474 EGMNDKVYALEQEK 487
G + V EK
Sbjct: 470 HGSSVDVDIFNSEK 483
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 142/369 (38%), Gaps = 76/369 (20%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
++P T+ L+V ++ Q ++AR +F++M G Y AL+ +C IDEA
Sbjct: 42 WRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAV 101
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE--LI----------------------- 234
+M QPD++ Y+ L+K A R E L+
Sbjct: 102 ELFGEMD-----QPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDF 156
Query: 235 ----------ETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
E + Q+M E+ + P VT V+ Y K G RVL +++ CKP
Sbjct: 157 RCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLE-LMKLRGCKP 215
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
+VWT N ++ F N+G+V K R G++P+ T+N+LI + ++
Sbjct: 216 NVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLL 275
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
M TYN +I A G F+ + G+K + TF LING +
Sbjct: 276 RLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKS 335
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
G K+ IA + ++M C PD+ T+
Sbjct: 336 G-------------KVDIAW----------------------KFLEKMVSAGCTPDTYTY 360
Query: 465 SIMTEAYAK 473
S E K
Sbjct: 361 SSFIEHLCK 369
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 161/376 (42%), Gaps = 22/376 (5%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
AL+V E++K + +P TY L+ G+ A + N+M G+ P Y L
Sbjct: 200 DALRVLELMKLRGC-KPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLL 258
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C + I+ AF L M+ D YTY+ LI A R + +L+ ++ R
Sbjct: 259 IRGQCIDGHIESAFRLLRLMEG-DGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 317
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN-KGQVDM 304
+ PN VT N ++ G K+G D + L M+ SA C PD +T ++ + KG +
Sbjct: 318 IKPNAVTFNSLINGLCKSGKVDIAWKFLEKMV-SAGCTPDTYTYSSFIEHLCKMKGSQEG 376
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ E + + P T + I+I K+R Y ++ M TY +
Sbjct: 377 LSFIGEMLQK-DVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMR 435
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
A+ G E +M G+ DT + L++G+A+ G +S ++ + +
Sbjct: 436 AYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVP 495
Query: 425 NVSFYNAVISACI-----------------KADDLMEMERVYKRMKEKHCRPDSETFSIM 467
N Y ++ + KA +L ++ ++ MK+ P+S T+S +
Sbjct: 496 NQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSI 555
Query: 468 TEAYAKEGMNDKVYAL 483
E ++++G ++ +L
Sbjct: 556 LEGFSEDGRTEEATSL 571
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 140/327 (42%), Gaps = 8/327 (2%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A ++ EM E+G+ P TA++ AYC+ + +A L MK L C+P+V+TY+ L+
Sbjct: 166 AEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMK-LRGCKPNVWTYNALV 224
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
+ + + L M V P+ VT N+++ G G + R+L ++E
Sbjct: 225 QGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLR-LMEGDGL 283
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
D +T N +++ G+ D ++ GI P TFN LI K D
Sbjct: 284 IADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWK 343
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+E M + TY++ IE M ++ +M + +K T + +I+
Sbjct: 344 FLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLL 403
Query: 403 ---NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
N GL + + S + V++ ++ + CI+ L E E V M +
Sbjct: 404 KERNYGLVARTWGE--MVSSGCNPDVVTYTTSMRAYCIEG-RLNEAENVLMEMSKNGVTV 460
Query: 460 DSETFSIMTEAYAKEGMNDKVYALEQE 486
D+ ++ + + +A G D ++ ++
Sbjct: 461 DTMAYNTLMDGHASIGQTDHAVSILKQ 487
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/398 (20%), Positives = 157/398 (39%), Gaps = 58/398 (14%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ L K G+ + A +F+ + GI+P + +L+ C++ +D A+ L +M
Sbjct: 289 TYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKM 348
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ C PD YTYS+ I+ + + +M ++ V P+TV IV+ K
Sbjct: 349 VS-AGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERN 407
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+ + R M+ S C PDV T T + + +G+++ E + G+ +T +N
Sbjct: 408 YGLVARTWGEMVSSG-CNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYN 466
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM------------GDAK 373
L+ + D S+++ M + TY ++ M G K
Sbjct: 467 TLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWK 526
Query: 374 HMEYT-----FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSF 428
+E T F+ M ++ T+ ++ G++ G + S V L + I+ N
Sbjct: 527 AIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDI 586
Query: 429 YNAVISACIKADDLMEM-----------------------------------ERVYKRMK 453
Y A+++ K+ ++ + ++ +
Sbjct: 587 YTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSR 646
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQML 491
K PD + ++ + K+G +D + +E + ML
Sbjct: 647 WKDYSPDEIVWKVIIDGLIKKGHSD----ISREMIIML 680
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 76/155 (49%), Gaps = 3/155 (1%)
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
+F+++K+ F P GTY +L + G+ E A + + M E+ I ++YTAL+ +
Sbjct: 536 LFDVMKKNEFL-PNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCF 594
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
C++ +A+V + M P + +Y L+ + + + + ++ + + +P+
Sbjct: 595 CKSKRYLDAWVLVCSM-IQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPD 653
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
+ +++ G K G D + R + MLE C+P
Sbjct: 654 EIVWKVIIDGLIKKGHSD-ISREMIIMLERMNCRP 687
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 48/257 (18%), Positives = 96/257 (37%), Gaps = 37/257 (14%)
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEK--FRNFGID---------- 318
R LS M+ S +PD +T N+++ + QVD+ ++K R F D
Sbjct: 32 RYLSLMVRSGW-RPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEG 90
Query: 319 -------------------PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
P+ + L+ K ++ ++ M++L + ++ Y
Sbjct: 91 FCETGRIDEAVELFGEMDQPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAY 150
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
V++ AK E ++M +G+ T +IN Y G + + L
Sbjct: 151 AAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKL 210
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
NV YNA++ + + + +M+ PD+ T++++ +G +
Sbjct: 211 RGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIES 270
Query: 480 VYALEQEKLQMLLEASG 496
+ +L L+E G
Sbjct: 271 AF-----RLLRLMEGDG 282
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 164/384 (42%), Gaps = 50/384 (13%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE--LYTALLAAYCRNSLIDE 197
+ P + TY L+ L + G+ + A+ + N++ PTP +T L+ Y ++ +DE
Sbjct: 309 FTPNDITYGVLMNGLCRVGKVDEAQVLLNKV------PTPNDVHFTILINGYVKSGRLDE 362
Query: 198 AFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIV 256
A L C+PDV+T++TLI C + ++ + DM TPN +T +
Sbjct: 363 ANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVD-MVNDMSANGCTPNLITYTTL 421
Query: 257 LGGYGKAGMFDQMERVLS----------------------------------GMLESATC 282
L G+ K ++ VL+ G + C
Sbjct: 422 LDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGC 481
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNF---GIDPETRTFNILIGAYGKKRMYDK 339
KPD++T NT++ +VD E +R+ G+ T T+N LI A+ + +
Sbjct: 482 KPDIFTFNTLIFGLC---KVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQE 538
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
++ M P TYN +I+AF +G + F++M + + + LIN
Sbjct: 539 ALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLIN 598
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
G G + +R +A +V YN++I+ K ++ E ++ +++ + +P
Sbjct: 599 GLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQP 658
Query: 460 DSETFSIMTEAYAKEGMNDKVYAL 483
D+ T++ + + + GM D Y L
Sbjct: 659 DAITYNTLICWHCRAGMFDDAYLL 682
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 132/332 (39%), Gaps = 10/332 (3%)
Query: 145 GTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQ 204
G MK L ++ + A + +M + G P +Y L+ A + ++EA L +
Sbjct: 212 GVVMKALCMVNEVDN---ACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEE 268
Query: 205 MKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG 264
M L C PDV T++ +I R L M R TPN +T +++ G + G
Sbjct: 269 M-FLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVG 327
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW-YEKFRNFGIDPETRT 323
D+ + +L+ P+ +++ + G++D + Y+K G P+ T
Sbjct: 328 KVDEAQVLLN-----KVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFT 382
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
FN LI KK + ++ M TY +++ F + Y +M
Sbjct: 383 FNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMS 442
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
A+G + + + L+ G K + + S ++ +N +I K D
Sbjct: 443 AKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKE 502
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ +Y+ M ++ T++ + A+ + G
Sbjct: 503 DALALYRDMLLDGVIANTVTYNTLIHAFLRGG 534
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 144/351 (41%), Gaps = 41/351 (11%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
++ +F+ Q Y Y L+ LG + + ++ K+ ++ EEGI L+ ++
Sbjct: 85 SMAIFQWAGSQKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIM 144
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
Y R +L +A L MK + C+P +Y+ ++ V A + ++ +M + V
Sbjct: 145 KYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGV 204
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P T +V+ D +L M + C P+ T++ + + +V+
Sbjct: 205 IPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHG-CVPNSVVYQTLIHALSKRDRVNEAL 263
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ E+ G P+ TFN +I YG R+ N + E
Sbjct: 264 KLLEEMFLMGCLPDVDTFNDVI--YGLCRL-----------------------NRIHEG- 297
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
AK + ++M G + T+ L+NG G KV + L +K+ +V
Sbjct: 298 -----AKLV----DRMLFRGFTPNDITYGVLMNGLCRVG---KVDEAQVLLNKVPTPNDV 345
Query: 427 SFYNAVISACIKADDLMEMER-VYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
F +I+ +K+ L E +Y +M + CRPD TF+ + K+G+
Sbjct: 346 HF-TILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGL 395
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 1/143 (0%)
Query: 144 EGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLN 203
E TY L+ K G E A +F+EMV + + P+ L+ CR + A L
Sbjct: 555 EITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLR 614
Query: 204 QMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKA 263
M PDV TY++LI L+ + + P+ +T N ++ + +A
Sbjct: 615 DM-IHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRA 673
Query: 264 GMFDQMERVLSGMLESATCKPDV 286
GMFD +L +E+A DV
Sbjct: 674 GMFDDAYLLLLRGVENAFIPNDV 696
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L K G A +FN++ EGI+P Y L+ +CR + D+A++
Sbjct: 623 PDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLL 682
Query: 202 L 202
L
Sbjct: 683 L 683
>gi|356565780|ref|XP_003551115.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Glycine max]
Length = 622
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 157/361 (43%), Gaps = 3/361 (0%)
Query: 114 TFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE 173
T + + +++F+ + L E+ +P + L+ + G E A+KV +M E
Sbjct: 170 TLLNALTTQKYFKPIHSIVSLVEEKQMKPDSRFFNALVNAFAEFGNIEDAKKVVQKMKES 229
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFE 232
G++P+ Y L+ Y DE+ L+ M N +P++ T + LI+A C E
Sbjct: 230 GLKPSACTYNTLIKGYGIAGKPDESIKLLDLMSIEGNVKPNLKTCNMLIRALCKMEHTSE 289
Query: 233 LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTI 292
+Y+ M + P+ V+ N V Y + G Q+E ++ M + KP+ T I
Sbjct: 290 AWNVVYK-MTTSGMQPDVVSFNTVAISYAQNGKTVQVEAMILEMRRNG-LKPNDRTCTII 347
Query: 293 LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF 352
+S + +G+V R+ + ++ G+ P N L+ + D ++ V+ M +
Sbjct: 348 ISGYCREGKVREALRFVYRIKDLGLQPNLIILNSLVNGFVDTMDRDGVNEVLNLMEEFYI 407
Query: 353 PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVIS 412
TY+ ++ A+S G + + + M G+K D + L GY A K
Sbjct: 408 RPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDGHAYSILAKGYVRAQEMEKAEE 467
Query: 413 SVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYA 472
+ + +K + NV + V+S + RV+ +M E P+ +TF + YA
Sbjct: 468 LLTVMTKSGVQPNVVIFTTVMSGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFETLIWGYA 527
Query: 473 K 473
+
Sbjct: 528 E 528
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 144/351 (41%), Gaps = 40/351 (11%)
Query: 149 KLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLID--EAFVTLNQMK 206
K++ +L KSG+P+ A +F ++E G +P+ YT LL A + V+L + K
Sbjct: 135 KVMNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEEK 194
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
+ +PD ++ L+ A + E + + Q M E + P+ T N ++ GYG AG
Sbjct: 195 QM---KPDSRFFNALVNAFAEFGNIEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKP 251
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
D+ ++L M KP++ T N ++ K G+ P+ +FN
Sbjct: 252 DESIKLLDLMSIEGNVKPNLKTCNMLIRALCKMEHTSEAWNVVYKMTTSGMQPDVVSFNT 311
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
+ +Y + G +E +M G
Sbjct: 312 VAISYAQN-----------------------------------GKTVQVEAMILEMRRNG 336
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+K + +T +I+GY G + + V L + N+ N++++ + D +
Sbjct: 337 LKPNDRTCTIIISGYCREGKVREALRFVYRIKDLGLQPNLIILNSLVNGFVDTMDRDGVN 396
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
V M+E + RPD T+S + A+++ G +K + L+ ++ GH
Sbjct: 397 EVLNLMEEFYIRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDGH 447
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 137/314 (43%), Gaps = 39/314 (12%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG-IEPTPELYTAL 185
A +V + +KE +P TY L+ G +G+P+ + K+ + M EG ++P + L
Sbjct: 219 AKKVVQKMKESGL-KPSACTYNTLIKGYGIAGKPDESIKLLDLMSIEGNVKPNLKTCNML 277
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A C+ EA+ + +M T QPDV +++T+ + + +E + +M
Sbjct: 278 IRALCKMEHTSEAWNVVYKMTT-SGMQPDVVSFNTVAISYAQNGKTVQVEAMILEMRRNG 336
Query: 246 VTPNTVTQNIVLGGY---GKA---------------------------GMFDQMER---- 271
+ PN T I++ GY GK G D M+R
Sbjct: 337 LKPNDRTCTIIISGYCREGKVREALRFVYRIKDLGLQPNLIILNSLVNGFVDTMDRDGVN 396
Query: 272 -VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
VL+ ++E +PDV T +TI++ ++ G ++ + Y G+ P+ ++IL
Sbjct: 397 EVLN-LMEEFYIRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDGHAYSILAKG 455
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
Y + + +K ++ M K + V+ + +G + F++M G+ +
Sbjct: 456 YVRAQEMEKAEELLTVMTKSGVQPNVVIFTTVMSGWCSVGRMDNAMRVFDKMGEFGVSPN 515
Query: 391 TKTFCCLINGYANA 404
KTF LI GYA A
Sbjct: 516 LKTFETLIWGYAEA 529
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
F+ + G + T+ L+N F + S V L + Q+ + F+NA+++A +
Sbjct: 153 FQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEEKQMKPDSRFFNALVNAFAE 212
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGHW 498
++ + ++V ++MKE +P + T++ + + Y G D E KL L+ G+
Sbjct: 213 FGNIEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPD-----ESIKLLDLMSIEGNV 267
Query: 499 QQNI 502
+ N+
Sbjct: 268 KPNL 271
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 153/378 (40%), Gaps = 38/378 (10%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+ P TY L+ L + G+ + AR + N++ P L+ L+ Y +DEA
Sbjct: 336 FTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAK 391
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+++ C PD++TY+TLI L +M + PN +T I++
Sbjct: 392 AVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDR 451
Query: 260 YGKAGMFDQMERVLS----------------------------------GMLESATCKPD 285
+ K G ++ VL G + S CKPD
Sbjct: 452 FCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPD 511
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
++T N+++ + + Y+ G+ T T+N LI A+ ++ + ++
Sbjct: 512 IFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVN 571
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
M P TYN +I+A G+ + FE M ++G+ + + LING G
Sbjct: 572 DMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTG 631
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ +R + ++ YN++I+ K E ++ +++ + PD+ T++
Sbjct: 632 NIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYN 691
Query: 466 IMTEAYAKEGMNDKVYAL 483
+ + KEGM D + L
Sbjct: 692 TLISWHCKEGMFDDAHLL 709
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 154/413 (37%), Gaps = 65/413 (15%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P +Y +L +L P++ VF EM+ +GI PT + ++ A C + +D A
Sbjct: 197 EPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACA 256
Query: 201 TLNQMK---TLPN-------------------------------CQPDVYTYSTLIKACV 226
L M +PN C PDV T++ I
Sbjct: 257 LLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLC 316
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQ-------------------------------NI 255
+R L M R TPN+ T N
Sbjct: 317 KMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNT 376
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
++ GY G D+ + V+ + S C PD++T NT++ KG + + +
Sbjct: 377 LINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIK 436
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G +P T+ ILI + K+ ++ +V++ M + YN +I A +
Sbjct: 437 GCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDA 496
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
F M ++G K D TF LI G F + + + + N YN +I A
Sbjct: 497 LNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHA 556
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
++ + E ++ M + C D T++ + +A + G +K AL ++ +
Sbjct: 557 FLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMM 609
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 146/351 (41%), Gaps = 8/351 (2%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
++++F+ Q Y Y L+ LG +G+ + + +M +EGI L+ ++
Sbjct: 112 SMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIM 171
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
Y R L +A L M+ + +C+P +Y+ ++ + +++ ++ +M + +
Sbjct: 172 KHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGI 231
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
+P T +V+ D +L M C P+ T++ + G+V+ +
Sbjct: 232 SPTVYTFGVVMKALCLVNEVDSACALLKDMTRHG-CVPNAIVYQTLIHALSKVGRVNEVL 290
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
+ E+ G P+ TFN I K + + +++ M F S TY ++
Sbjct: 291 KLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGL 350
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI--AE 424
MG ++ + F LINGY + G + +V S L +
Sbjct: 351 CRMGKVDEARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEA-KAVMHESMLSVGCGP 405
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++ YN +I K L+ + M+ K C P+ T++I+ + + KEG
Sbjct: 406 DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEG 456
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 35/228 (15%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P T+ L+ L K + E A ++ +M+ EG+ Y L+ A+ R + EA
Sbjct: 509 KPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALK 568
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+N M C D TY+ LIKA A E L++DM + + PN ++ NI++ G
Sbjct: 569 LVNDM-LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGL 627
Query: 261 GKAG--------MFDQMERVLS------GMLESATCK--------------------PDV 286
+ G + D + R L+ L + CK PD
Sbjct: 628 CRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDA 687
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
T NT++S +G D + + G P T+ IL+ + K+
Sbjct: 688 ITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKE 735
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 2/156 (1%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ L ++G E +F +M+ +G+ P L+ CR I A L M
Sbjct: 584 TYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM 643
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
PD+ TY++LI R + L+ + + P+ +T N ++ + K GM
Sbjct: 644 IH-RGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGM 702
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
FD +LS ++S P+ T ++S F +G
Sbjct: 703 FDDAHLLLSRGVDSGF-IPNEVTWYILVSNFIKEGD 737
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 100/272 (36%), Gaps = 4/272 (1%)
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
Y LI A F+ + L M + + +++ YG+AG+ Q R+L M
Sbjct: 131 VYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 190
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
+C+P + N +L V ++ + + + GI P TF +++ A
Sbjct: 191 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNE 250
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
D ++++ M + + Y +I A S +G + E+M G D TF
Sbjct: 251 VDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFND 310
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
I+G H+ V N Y ++ + + E + ++
Sbjct: 311 AIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN-- 368
Query: 457 CRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
P+ F+ + Y G D+ A+ E +
Sbjct: 369 --PNVVLFNTLINGYVSRGRLDEAKAVMHESM 398
>gi|357166198|ref|XP_003580632.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Brachypodium distachyon]
Length = 644
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 149/329 (45%), Gaps = 10/329 (3%)
Query: 163 ARKVFNEMVEEG----IEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTY 218
AR++ E+ G + TP +L+ + L DE + M+ L +P TY
Sbjct: 153 ARQLVAELRARGDAVLMHLTPPSSASLIRSLAALGLADELLWAWSAMR-LAGVEPSRVTY 211
Query: 219 STLIKACVDAMRFELIETLYQDMD-ERSVTPNTVTQNIVLGGYGKAGMF-DQMERVLSGM 276
+ L+ +A + ++ M E V P+ V+ NI++ GY +AG D M R L+ M
Sbjct: 212 NCLLDGLANAGLLDTAINVFDAMSTEDRVRPDVVSYNILIKGYCRAGRAQDAMAR-LAHM 270
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGI--DPETRTFNILIGAYGKK 334
E A PD T T++ + ++G R +++ G+ D + ++IGA K+
Sbjct: 271 REQAELSPDKVTYLTLMQLHYSEGTFSQCIRLFQEMEEMGMGKDIPQHAYVLVIGALCKE 330
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
+ +V E M K +P ++ Y +I+ G FE+M A G++ D T+
Sbjct: 331 GKPFEGLAVFERMLKSGYPAKAAMYTALIDTMGKFGRENEAMLLFERMKASGLELDAITY 390
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
++N G + I R + IA N FY ++I KA + + + +++ MK
Sbjct: 391 GVIVNCLCRFGKLDEAILCFRNCVEKGIAVNAIFYTSLIDGFGKAGMVDQAQELFEEMKV 450
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
K PDS ++++ + AK G D AL
Sbjct: 451 KGFVPDSYCYNVLIDGLAKAGRLDDACAL 479
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 132/340 (38%), Gaps = 8/340 (2%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEM-VEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+P TY LL L +G + A VF+ M E+ + P Y L+ YCR +A
Sbjct: 205 EPSRVTYNCLLDGLANAGLLDTAINVFDAMSTEDRVRPDVVSYNILIKGYCRAGRAQDAM 264
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQN---IV 256
L M+ PD TY TL++ F L+Q+M+E + + + Q+ +V
Sbjct: 265 ARLAHMREQAELSPDKVTYLTLMQLHYSEGTFSQCIRLFQEMEEMGMGKD-IPQHAYVLV 323
Query: 257 LGGYGKAGMFDQMERVLSGMLESA-TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
+G K G + V ML+S K ++T ++ G+ + +E+ +
Sbjct: 324 IGALCKEGKPFEGLAVFERMLKSGYPAKAAMYT--ALIDTMGKFGRENEAMLLFERMKAS 381
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G++ + T+ +++ + D+ + + Y ++I+ F G
Sbjct: 382 GLELDAITYGVIVNCLCRFGKLDEAILCFRNCVEKGIAVNAIFYTSLIDGFGKAGMVDQA 441
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
+ FE+M +G D+ + LI+G A AG + + + V Y +I
Sbjct: 442 QELFEEMKVKGFVPDSYCYNVLIDGLAKAGRLDDACALYKRMEDDGCDQTVYTYTIIIDG 501
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
K E + + M +K P + F G
Sbjct: 502 LFKKHKNEEAIKFWNTMIDKGITPTAAAFRTFANGLCLSG 541
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 82/211 (38%), Gaps = 40/211 (18%)
Query: 125 FQALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
F+ L VFE MLK Y K Y L+ +GK G+ A +F M G+E Y
Sbjct: 334 FEGLAVFERMLKSG--YPAKAAMYTALIDTMGKFGRENEAMLLFERMKASGLELDAITYG 391
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
++ CR +DEA + NC E
Sbjct: 392 VIVNCLCRFGKLDEAILCFR------NCV------------------------------E 415
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+ + N + ++ G+GKAGM DQ + + M + PD + N ++ A G++D
Sbjct: 416 KGIAVNAIFYTSLIDGFGKAGMVDQAQELFEEM-KVKGFVPDSYCYNVLIDGLAKAGRLD 474
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
Y++ + G D T+ I+I KK
Sbjct: 475 DACALYKRMEDDGCDQTVYTYTIIIDGLFKK 505
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 1/127 (0%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y L+ GK+G + A+++F EM +G P Y L+ + +D+A +M+
Sbjct: 425 YTSLIDGFGKAGMVDQAQELFEEMKVKGFVPDSYCYNVLIDGLAKAGRLDDACALYKRME 484
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
C VYTY+ +I + E + M ++ +TP G +G F
Sbjct: 485 D-DGCDQTVYTYTIIIDGLFKKHKNEEAIKFWNTMIDKGITPTAAAFRTFANGLCLSGKF 543
Query: 267 DQMERVL 273
+ R+L
Sbjct: 544 SRACRIL 550
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
T + ++I + + +G A + + + M G++ T+ CL++G ANAGL I+
Sbjct: 172 TPPSSASLIRSLAALGLADELLWAWSAMRLAGVEPSRVTYNCLLDGLANAGLLDTAINVF 231
Query: 415 -RLASKLQIAENVSFYNAVISACIKADDLME-MERVYKRMKEKHCRPDSETFSIMTEAYA 472
++++ ++ +V YN +I +A + M R+ ++ PD T+ + + +
Sbjct: 232 DAMSTEDRVRPDVVSYNILIKGYCRAGRAQDAMARLAHMREQAELSPDKVTYLTLMQLHY 291
Query: 473 KEGMNDKVYALEQEKLQM 490
EG + L QE +M
Sbjct: 292 SEGTFSQCIRLFQEMEEM 309
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 155/356 (43%), Gaps = 6/356 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
PK + LL L KSG +L RK FN+M+ GI P+ Y ++ C+ ++ +
Sbjct: 252 PKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRL 311
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
QM+ + PDV TY++LI E + +L+ +M + P+ +T N ++ Y
Sbjct: 312 FVQMREM-GLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYC 370
Query: 262 KAGMFDQMERVLSGM--LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K F++M R +++ KP+V T +T++ F +G + + + R G+ P
Sbjct: 371 K---FEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLP 427
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
T+ LI A K + ++ M + TY +++ G E F
Sbjct: 428 NEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVF 487
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
M +G+ + + + L++GY A + ++ ++ I ++ Y ++I
Sbjct: 488 RSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQ 547
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
L E + + + MK + + + + +AY K G + QE + +EA+
Sbjct: 548 RKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEAT 603
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 164/405 (40%), Gaps = 40/405 (9%)
Query: 129 QVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAA 188
++F ++E P TY L+ GK G E +FNEM + G P Y L+
Sbjct: 310 RLFVQMREMGL-SPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINC 368
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVT 247
YC+ + AF ++MK +P+V TYSTLI A C + M I+ L+ DM +
Sbjct: 369 YCKFEKMPRAFEYFSEMKN-NGLKPNVVTYSTLIDAFCKEGMMQGAIK-LFVDMRRTGLL 426
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMER 307
PN T ++ KAG + ++L+ ML++ K ++ T +L G++ E
Sbjct: 427 PNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV-KLNIVTYTALLDGLCKAGRMIEAEE 485
Query: 308 WYEKFRNFGIDPETRTFNILIGAYGK-KRMYDKMSS------------------------ 342
+ GI P + + L+ Y K +RM D M
Sbjct: 486 VFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHC 545
Query: 343 ----------VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
++E M+ +I+A+ G + F++M G++A
Sbjct: 546 SQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIV 605
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
T+C LI+G AG+ + L + NV+ Y ++I K + + ++++ M
Sbjct: 606 TYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEM 665
Query: 453 KEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
+ + PD F+ + + K G + L ++ +E H
Sbjct: 666 QCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLH 710
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 148/352 (42%), Gaps = 39/352 (11%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY LL L K+G+ A +VF M+++GI P ++YTAL+ Y + +++A L QM
Sbjct: 466 TYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQM 525
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
T N +PD+ Y ++I + E + + ++M R ++ N V ++ Y KAG
Sbjct: 526 -TECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGK 584
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
M + + + T ++ G V++ ++ + + G+ P +
Sbjct: 585 SSDALNFFQEM-QDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYT 643
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
LI K NN IE+ AK + F++M
Sbjct: 644 SLIDGLCK--------------------------NNCIES------AKKL---FDEMQCR 668
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
GM D F LI+G G + + + ++L I ++ Y +++S + +L +
Sbjct: 669 GMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQA 728
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL--EQEKLQMLLEAS 495
+ + M EK P+ + Y K G D+ L E E++ ++ E++
Sbjct: 729 RKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGLITESA 780
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 132/345 (38%), Gaps = 22/345 (6%)
Query: 152 VLLGKSGQPELARKVFN-EMVEEGIEPTPELYTALLAAYCR----------------NSL 194
+LLG P+LA K F + G T E Y ++ R NS
Sbjct: 135 ILLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSR 194
Query: 195 IDEAFVTLNQMKTLPN----CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT 250
+D F N L + C + L V+ E + M P
Sbjct: 195 MDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKA 254
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYE 310
+ N +L K+G + + + M+ A P V+T N ++ +G ++ R +
Sbjct: 255 RSCNFLLHRLSKSGNGQLVRKFFNDMI-GAGIAPSVFTYNVMIDYLCKEGDLENSRRLFV 313
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
+ R G+ P+ T+N LI YGK ++++S+ M+ + TYN +I +
Sbjct: 314 QMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFE 373
Query: 371 DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYN 430
F +M G+K + T+ LI+ + G+ I + + N Y
Sbjct: 374 KMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYT 433
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++I A KA +L E ++ M + + + T++ + + K G
Sbjct: 434 SLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAG 478
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 80/195 (41%)
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
C + + SVF G ++ + + RNF P+ R+ N L+ K +
Sbjct: 215 CVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVR 274
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
M + TYN +I+ GD ++ F QM G+ D T+ LI+GY
Sbjct: 275 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 334
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
G +V S + ++ YN +I+ K + + + MK +P+
Sbjct: 335 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 394
Query: 462 ETFSIMTEAYAKEGM 476
T+S + +A+ KEGM
Sbjct: 395 VTYSTLIDAFCKEGM 409
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 155/327 (47%), Gaps = 34/327 (10%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY LL + K GQ +LA ++ +EM + I P Y+ ++ Y + +DEA N+M
Sbjct: 214 TYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEM 273
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
K + D +Y+TL+ RFE + ++M+ + + VT N +LGGYGK G
Sbjct: 274 K-FASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGK 332
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+++++RV M ++ P++ T +T++ V++ G + +F+ G+ + ++
Sbjct: 333 YEEVKRVFEEM-KAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYS 391
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF-----------SDMGDAKH 374
LI A K + + S ++ M K TYN++I+AF S++GD +
Sbjct: 392 ALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGIVEDATESEVGDKED 451
Query: 375 MEY--TFEQM------HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
+ F Q+ HA+ + C++ +FHK+ +L I NV
Sbjct: 452 NQIIKIFGQLAAEKTCHAKKENRGRQEILCIL------AVFHKM-------HELDIKPNV 498
Query: 427 SFYNAVISACIKADDLMEMERVYKRMK 453
++A+++AC + + + + + ++
Sbjct: 499 VTFSAILNACSRCNSFEDASMLLEELR 525
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 149/330 (45%), Gaps = 9/330 (2%)
Query: 166 VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC 225
+F+EM+ GIE Y LL A C+ +D AF +++M + P+V TYST+I
Sbjct: 199 LFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPR-KHIMPNVVTYSTVIDGY 257
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
A R + L+ +M S+ + V+ N +L Y K G F++ V M ES+ K D
Sbjct: 258 AKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEM-ESSGIKKD 316
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
T N +L + +G+ + ++R +E+ + I P T++ LI Y K +Y + V
Sbjct: 317 AVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFR 376
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
+K Y+ +I+A G + ++M EG++ + T+ +I+ + +G
Sbjct: 377 EFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSG 436
Query: 406 LFHKVI-SSVRLASKLQIAENVSFYNAVISACIKADDLMEME-----RVYKRMKEKHCRP 459
+ S V QI + A + K ++ E V+ +M E +P
Sbjct: 437 IVEDATESEVGDKEDNQIIKIFGQLAAEKTCHAKKENRGRQEILCILAVFHKMHELDIKP 496
Query: 460 DSETFSIMTEAYAK-EGMNDKVYALEQEKL 488
+ TFS + A ++ D LE+ +L
Sbjct: 497 NVVTFSAILNACSRCNSFEDASMLLEELRL 526
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 129/274 (47%), Gaps = 12/274 (4%)
Query: 212 QPDVYTYSTLIKAC----VDAMRFELI---ETLYQDMDERSVTPNTVTQNIVLGGYGKAG 264
+P++ TY+ +I AC VD R I L+ +M R + + T N +L K G
Sbjct: 167 KPNLVTYNAVIDACGKGGVDFNRAAEIFDEMNLFSEMLYRGIEQDIFTYNTLLDAVCKGG 226
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYE--KFRNFGIDPETR 322
D +++S M P+V T +T++ +A G++D + KF + G+D
Sbjct: 227 QMDLAFQIMSEM-PRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLD--RV 283
Query: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
++N L+ Y K +++ +V + M + TYN ++ + G + ++ FE+M
Sbjct: 284 SYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEM 343
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
AE + + T+ LI+ Y+ GL+ + + R K + +V Y+A+I A K +
Sbjct: 344 KAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLV 403
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
M ++ RP+ T++ + +A+ + G+
Sbjct: 404 ESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGI 437
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 108/252 (42%), Gaps = 10/252 (3%)
Query: 243 ERSVTPNTVTQNIVLGGYGKAG--------MFDQMERVLSGMLESATCKPDVWTMNTILS 294
+ + PN VT N V+ GK G +FD+M + S ML + D++T NT+L
Sbjct: 163 DSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMN-LFSEMLYRGI-EQDIFTYNTLLD 220
Query: 295 VFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 354
GQ+D+ + + I P T++ +I Y K D+ ++ M+
Sbjct: 221 AVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGL 280
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
+YN ++ ++ +G + ++M + G+K D T+ L+ GY G + +V
Sbjct: 281 DRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVF 340
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
+I N+ Y+ +I K E V++ K+ + D +S + +A K
Sbjct: 341 EEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKN 400
Query: 475 GMNDKVYALEQE 486
G+ + + E
Sbjct: 401 GLVESAVSFLDE 412
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 129 QVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAA 188
+VFE +K + + P TY L+ + K G + A +VF E + G++ LY+AL+ A
Sbjct: 338 RVFEEMKAERIF-PNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDA 396
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
C+N L++ A L++M T +P+V TY+++I A
Sbjct: 397 LCKNGLVESAVSFLDEM-TKEGIRPNVVTYNSIIDA 431
>gi|168063537|ref|XP_001783727.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664733|gb|EDQ51441.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 445
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 136/318 (42%), Gaps = 1/318 (0%)
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
G R + +G P E YT LL++ + + E + L QM+ N PD
Sbjct: 4 GDHRQVRSTLKNLRRDGHRPAKETYTLLLSSLISDGRLGEGPLLLQQMEE-DNVIPDAIF 62
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
++TL+ +A + + E L +M ER T + N ++ GYG G ++ ++L M
Sbjct: 63 FNTLLNGYCEAGKMKEAEALVLEMKERGCPLITSSYNTLIKGYGLDGQPEEAMKLLQEMA 122
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
+ KP+ T N ++ +A+ + R G+ P+ ++N L + K
Sbjct: 123 KDVNSKPNDRTFNMLIKAWAHDKNPEKARNVISMMRAAGVGPDVVSYNTLAQLFAKLGKP 182
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
+V+ M+ + TY VI + G E+M +G+ F L
Sbjct: 183 WDAENVITEMQNVYLRPNERTYGIVINGYIAAGQIDESLRLIERMKMDGISPTIAVFNHL 242
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
+ GY+ + HKV +L + +V + +++A + E + V RMKE
Sbjct: 243 VKGYSESMKPHKVDKVFKLMENFGVKPDVQTFGLIMNAWCSTGLIDEAKAVLLRMKEYDL 302
Query: 458 RPDSETFSIMTEAYAKEG 475
+PD +SI+ + Y+++G
Sbjct: 303 QPDVMAYSILVKGYSRQG 320
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 156/348 (44%), Gaps = 3/348 (0%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
++P + TY LL L G+ + +M E+ + P + LL YC + EA
Sbjct: 21 HRPAKETYTLLLSSLISDGRLGEGPLLLQQMEEDNVIPDAIFFNTLLNGYCEAGKMKEAE 80
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
+ +MK C +Y+TLIK +D E ++ L + + + PN T N+++
Sbjct: 81 ALVLEMKER-GCPLITSSYNTLIKGYGLDGQPEEAMKLLQEMAKDVNSKPNDRTFNMLIK 139
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
+ ++ V+S M+ +A PDV + NT+ +FA G+ E + +N +
Sbjct: 140 AWAHDKNPEKARNVIS-MMRAAGVGPDVVSYNTLAQLFAKLGKPWDAENVITEMQNVYLR 198
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P RT+ I+I Y D+ ++E M+ T + +N++++ +S+ ++
Sbjct: 199 PNERTYGIVINGYIAAGQIDESLRLIERMKMDGISPTIAVFNHLVKGYSESMKPHKVDKV 258
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
F+ M G+K D +TF ++N + + GL + + + + + +V Y+ ++ +
Sbjct: 259 FKLMENFGVKPDVQTFGLIMNAWCSTGLIDEAKAVLLRMKEYDLQPDVMAYSILVKGYSR 318
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
E E M +++ +P+ T++ + Y D + QE
Sbjct: 319 QGRPEEGEAFLNIMIDENLKPNVITYTTVISGYCSLAQMDDAMRVFQE 366
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 153/347 (44%), Gaps = 6/347 (1%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEE-GIEPTPELYTALLAAYCRNSLIDEAFVTLNQ 204
+Y L+ G GQPE A K+ EM ++ +P + L+ A+ + ++A ++
Sbjct: 97 SYNTLIKGYGLDGQPEEAMKLLQEMAKDVNSKPNDRTFNMLIKAWAHDKNPEKARNVISM 156
Query: 205 MKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG 264
M+ PDV +Y+TL + + E + +M + PN T IV+ GY AG
Sbjct: 157 MRA-AGVGPDVVSYNTLAQLFAKLGKPWDAENVITEMQNVYLRPNERTYGIVINGYIAAG 215
Query: 265 MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTF 324
D+ R++ M + P + N ++ ++ + +++ ++ NFG+ P+ +TF
Sbjct: 216 QIDESLRLIERM-KMDGISPTIAVFNHLVKGYSESMKPHKVDKVFKLMENFGVKPDVQTF 274
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
+++ A+ + D+ +V+ M++ Y+ +++ +S G + E M
Sbjct: 275 GLIMNAWCSTGLIDEAKAVLLRMKEYDLQPDVMAYSILVKGYSRQGRPEEGEAFLNIMID 334
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
E +K + T+ +I+GY + + + + N+ + +I +A
Sbjct: 335 ENLKPNVITYTTVISGYCSLAQMDDAMRVFQEMRSRSVFPNMQTFRTLIWGFKEARWPRR 394
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAY---AKEGMNDKVYALEQEKL 488
E + + +++ PD E ++ + + +G D+V A KL
Sbjct: 395 AEEILEYIRKAGFTPDLECIELVADCWRSIGADGEADRVLAGTNSKL 441
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP Y L+ + G+PE N M++E ++P YT +++ YC + +D+A
Sbjct: 303 QPDVMAYSILVKGYSRQGRPEEGEAFLNIMIDENLKPNVITYTTVISGYCSLAQMDDAMR 362
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M++ + P++ T+ TLI +A E + + + + TP+ +V +
Sbjct: 363 VFQEMRSR-SVFPNMQTFRTLIWGFKEARWPRRAEEILEYIRKAGFTPDLECIELVADCW 421
Query: 261 GKAGMFDQMERVLSG 275
G + +RVL+G
Sbjct: 422 RSIGADGEADRVLAG 436
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 145/374 (38%), Gaps = 35/374 (9%)
Query: 134 LKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNS 193
L EQ P + TY L+ L G+ + A ++ N + G PT +T L+ YC+
Sbjct: 344 LMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAE 402
Query: 194 LIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQ 253
ID+A + M + NC+ D+ Y LI + R + + +M + PN VT
Sbjct: 403 RIDDALRVKSNMIS-SNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTY 461
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
++ GY K GM V ++E C P+ WT +++ ++ K +
Sbjct: 462 TSIIDGYCKVGMVGAALEVFK-LMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQ 520
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP-------------------- 353
GI P T+ LI KK +D + E M +
Sbjct: 521 EDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAE 580
Query: 354 ------------WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
T TY ++++ FS G+ E+M EG KAD T+ L+
Sbjct: 581 EAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQAL 640
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
++ +S + + + N+ Y +IS IK + ++ M +P +
Sbjct: 641 CKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSA 700
Query: 462 ETFSIMTEAYAKEG 475
T+++ +Y K G
Sbjct: 701 TTYTVFISSYCKIG 714
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/384 (20%), Positives = 144/384 (37%), Gaps = 42/384 (10%)
Query: 147 YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK 206
Y L+ +L K + + A++ NEM G+ P YT+++ YC+ ++ A M+
Sbjct: 426 YGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLME 485
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
C P+ +TY +LI + + L M E +TP +T ++ G K F
Sbjct: 486 H-EGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEF 544
Query: 267 DQMERVLSGM--------------LESATCKPDV-----------------WTMNTILSV 295
D R+ M L A CK T +++
Sbjct: 545 DNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDG 604
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
F+ G D EK N G + T+++L+ A K++ ++ S+++ M
Sbjct: 605 FSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCN 664
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
Y +I G H + F +M + G K T+ I+ Y G + +
Sbjct: 665 IVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIG 724
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + +V YN I+ C + KRM + C P+ T+ ++ + + K
Sbjct: 725 EMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMS 784
Query: 476 MNDKVYALEQEKLQMLLEASGHWQ 499
+ + Y ++ SG W
Sbjct: 785 LINAHY----------VDTSGMWN 798
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 144/343 (41%), Gaps = 40/343 (11%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ L K G+ AR + +EM G+ P+ Y A++ YC++ + +A + + +
Sbjct: 286 TYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDA-LGIKAL 344
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
C PD +TY++LI + + E L R TP +T ++ GY KA
Sbjct: 345 MEQNGCNPDDWTYNSLIYGLCGG-KLDEAEELLNGAIARGFTPTVITFTNLINGYCKAER 403
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV-DMMERWYEKFRNFGIDPETRTF 324
D RV S M+ S+ CK D+ +++V K ++ + E E F N G+ P
Sbjct: 404 IDDALRVKSNMI-SSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFAN-GLAP----- 456
Query: 325 NILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHA 384
N++ TY ++I+ + +G F+ M
Sbjct: 457 NVV------------------------------TYTSIIDGYCKVGMVGAALEVFKLMEH 486
Query: 385 EGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLME 444
EG + T+ LI G HK ++ + + I V Y +I K +
Sbjct: 487 EGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDN 546
Query: 445 MERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEK 487
R+++ M++ PD + ++++T+A K G ++ Y+ K
Sbjct: 547 AFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRK 589
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 138/378 (36%), Gaps = 40/378 (10%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNS-------- 193
P TY +++ K G +A + F + E G++ ALL YCR S
Sbjct: 177 PDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWL 236
Query: 194 ---------------------------LIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
+ EA V L M C +++TY+ LIK
Sbjct: 237 LMMMPLMGCRRNEYSYTILIQGLCEARCVREALV-LVFMMVHDGCSLNLHTYTLLIKGLC 295
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAG-MFDQMERVLSGMLESATCKPD 285
R L +M R V P+ T N ++ GY K+G M D + + ++E C PD
Sbjct: 296 KEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALG--IKALMEQNGCNPD 353
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
WT N+++ G++D E G P TF LI Y K D V
Sbjct: 354 DWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKS 412
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
M Y +I K + T +M A G+ + T+ +I+GY G
Sbjct: 413 NMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVG 472
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ + +L N Y ++I I+ L + + +M+E P T++
Sbjct: 473 MVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYT 532
Query: 466 IMTEAYAKEGMNDKVYAL 483
+ + K+ D + L
Sbjct: 533 TLIQGQCKKHEFDNAFRL 550
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 126/289 (43%), Gaps = 6/289 (2%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL+VF++++ + + P TY L+ L + + A + +M E+GI P YT L+
Sbjct: 477 ALEVFKLMEHEGCH-PNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLI 535
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
C+ D AF L +M PD Y+ L A + R E Y + + V
Sbjct: 536 QGQCKKHEFDNAF-RLFEMMEQNGLTPDEQAYNVLTDALCKSGR---AEEAYSFLVRKGV 591
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
VT ++ G+ KAG D ++ M+ CK D++T + +L + +++
Sbjct: 592 VLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEG-CKADLYTYSVLLQALCKQKKLNEAL 650
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
++ G+ + I+I K+ +D S+ M +++TY I ++
Sbjct: 651 SILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSY 710
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
+G + E+ +M +G+ D T+ ING + G + S+++
Sbjct: 711 CKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLK 759
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 133/315 (42%), Gaps = 21/315 (6%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
K G+ + A+ +FNEM+ G +P+ YT +++YC+ I+EA + +M+ PDV
Sbjct: 677 KEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMER-DGVTPDV 735
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
TY+ I C + + + M + S PN T ++L + K + + SG
Sbjct: 736 VTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSG 795
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
M W N +++M+ + E+ G++P T++ +I + K
Sbjct: 796 M----------W----------NWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKAT 835
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
++ ++++M Y +I+ D+ M G + +++
Sbjct: 836 RLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYH 895
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
LI G + G + + S + N + + +KA + ++ M +
Sbjct: 896 YLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNR 955
Query: 456 HCRPDSETFSIMTEA 470
HCR DSE++S++T++
Sbjct: 956 HCRIDSESYSMLTDS 970
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 85/212 (40%), Gaps = 1/212 (0%)
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
N+ L + M + M ++ S +++ PD T NT++ + KG + + R++ R
Sbjct: 148 NLALRSLLRFDMTEYMGKLYSHLVQEGL-LPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
G+ +T T N L+ Y + K ++ M + +Y +I+ + +
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVR 266
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
M +G + T+ LI G G H + + +V YNA+I
Sbjct: 267 EALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
K+ + + + M++ C PD T++
Sbjct: 327 DGYCKSGRMKDALGIKALMEQNGCNPDDWTYN 358
>gi|125558723|gb|EAZ04259.1| hypothetical protein OsI_26403 [Oryza sativa Indica Group]
Length = 528
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 148/329 (44%), Gaps = 2/329 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E TY L+ ++G+ E AR + EM +G++P+ +++ +LA + +AF
Sbjct: 192 PDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAV 251
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L +M +PD + Y+ +I + M E + P+ VT N ++ +
Sbjct: 252 LREMHA-SGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHC 310
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G D+ + M ES C T N ++++ + + + +E + + G+ P
Sbjct: 311 KGGRHDRAIELFDEMRES-NCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNI 369
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+ L+ YG+ + + +E M+ +S+ Y+ ++ A++ G A H +
Sbjct: 370 ITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLADHALNVVKA 429
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M A+G++A T LIN + + S ++ + + +V Y ++ A I+ +
Sbjct: 430 MRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQ 489
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEA 470
++ +Y+ M C PD + +++ A
Sbjct: 490 FEKVPVIYEEMITSGCAPDRKARAMLRSA 518
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 156/348 (44%), Gaps = 2/348 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P+ Y LL K G + A +V +EM + G+ P Y+ L+ AY R + A +
Sbjct: 156 KPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARI 215
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +M+ +P Y +S ++ D ++ + ++M V P+ N+++ +
Sbjct: 216 LLKEMEA-DGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTF 274
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
GK M E +PDV T NT++ G+ D +++ R
Sbjct: 275 GKYNCLGHAMDAFDRMREEGI-EPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLG 333
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T T+NI+I G+++ ++ + +++ M++ TY +++ + G K E
Sbjct: 334 TTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIE 393
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
M A+G+K + + L+N YA GL ++ V+ + + N++I+A +
Sbjct: 394 AMKADGLKPSSTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDR 453
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
+ E V + MKE RPD T++ + +A + +KV + +E +
Sbjct: 454 RIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMI 501
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/275 (18%), Positives = 110/275 (40%)
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
+PD +S LI A A + L +TP + ++ G A + E
Sbjct: 85 EPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEA 144
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+ + KP N +L + G + E+ ++ G+ P+ T+++L+ AY
Sbjct: 145 LFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAY 204
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
+ ++ +++ M +S ++ ++ F D G+ + +MHA G++ D
Sbjct: 205 TRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDR 264
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
+ +I+ + + + + I +V +N +I A K ++
Sbjct: 265 HFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDE 324
Query: 452 MKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
M+E +C + T++IM +E + V A+ E
Sbjct: 325 MRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAE 359
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 158/390 (40%), Gaps = 52/390 (13%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ LL +S + A +FNE+ + + + ++ C + F
Sbjct: 122 PLSNTFNNLMCLLIRSNYFDKAWWIFNELKSKVVLDAYS-FGIMIKGCCEAGYFVKGFRL 180
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L ++ P+V Y+TLI C L + L+ MD + PN T ++++ G+
Sbjct: 181 LAMLEEF-GLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFF 239
Query: 262 KAG-------MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRN 314
K G M++ M+R SG++ P+ + N ++S + N G VD + + + R
Sbjct: 240 KQGLQREGFQMYENMKR--SGIV------PNAYAYNCLISEYCNGGMVDKAFKVFAEMRE 291
Query: 315 FGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKH 374
GI T+NILIG + + + + ++ + K+ TYN +I F D+G
Sbjct: 292 KGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDT 351
Query: 375 MEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR------------------- 415
F Q+ + G+ T+ LI GY+ + V+
Sbjct: 352 AVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILID 411
Query: 416 ----------------LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
L K + +V Y+ +I ++ E +++K + E H +P
Sbjct: 412 AFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQP 471
Query: 460 DSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+S ++ M Y KEG + + L E +
Sbjct: 472 NSVIYNTMIHGYCKEGSSYRALRLLNEMVH 501
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 140/330 (42%), Gaps = 10/330 (3%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ K G +++ M GI P Y L++ YC ++D+AF
Sbjct: 226 PNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKV 285
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+M+ V TY+ LI +F L +++ ++PN VT NI++ G+
Sbjct: 286 FAEMRE-KGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFC 344
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN----KGQVDMMERWYEKFRNFGI 317
G D R+ + L+S+ P + T NT+++ ++ G +D+++ E+ I
Sbjct: 345 DVGKMDTAVRLFN-QLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERC----I 399
Query: 318 DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEY 377
P T+ ILI A+ + +K + M K TY+ +I G+ K
Sbjct: 400 APSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASK 459
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI 437
F+ + ++ ++ + +I+GY G ++ + + + NV+ + + I
Sbjct: 460 LFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLC 519
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ + E E + +M +P + ++
Sbjct: 520 RDEKWKEAELLLGQMINSGLKPSVSLYKMV 549
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 3/201 (1%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A+++F LK P TY L+ K A + EM E I P+ YT L+
Sbjct: 352 AVRLFNQLKSSGL-SPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILI 410
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
A+ R + ++A ++ + PDVYTYS LI + L++ + E +
Sbjct: 411 DAFARLNYTEKA-CEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHL 469
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
PN+V N ++ GY K G + R+L+ M+ S P+V + + + + + E
Sbjct: 470 QPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMV-PNVASFCSTIGLLCRDEKWKEAE 528
Query: 307 RWYEKFRNFGIDPETRTFNIL 327
+ N G+ P + ++
Sbjct: 529 LLLGQMINSGLKPSVSLYKMV 549
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 75/170 (44%), Gaps = 8/170 (4%)
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T ++ ++ AY D+ + + +M S+T+NN++ + F
Sbjct: 89 TPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFN 148
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
++ ++ + D +F +I G AG F K + + + ++ NV Y +I C K
Sbjct: 149 ELKSK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYG 207
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
++M + ++ +M P+ T+S++ + K+G L++E QM
Sbjct: 208 NVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQG-------LQREGFQM 250
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 169/364 (46%), Gaps = 3/364 (0%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
LK + +AL + + Q F Q + +Y L+ L + G+ + A ++ + + + P
Sbjct: 140 LKGEVHKALYFHDKVVAQGF-QLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNV 198
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+Y+ ++ + C++ L+++AF +M + PDV TYS+LI + + L+
Sbjct: 199 VMYSTIIDSMCKDKLVNDAFDLYCEMVS-KRISPDVVTYSSLISGFCVVGKLKYAVDLFN 257
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
M ++ PN T +I++ G+ K G + + VL+ M++ K DV T N+++ +
Sbjct: 258 RMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNV-KLDVVTYNSLMDGYCLV 316
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
QV+ + + G+ P+ +++I+I + K +M D+ + E M Q TY
Sbjct: 317 KQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTY 376
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
N++++ G ++MH G ++ T+ +++ K I + +
Sbjct: 377 NSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKE 436
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
I ++ Y +I+ K L + ++V++ + K P+ T++ + + +G D+
Sbjct: 437 KGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDE 496
Query: 480 VYAL 483
A+
Sbjct: 497 GLAM 500
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 144/350 (41%), Gaps = 43/350 (12%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ G+ + A +FN M+ + I P ++ L+ +C+ + EA
Sbjct: 231 PDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNV 290
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L M N + DV TY++L+ + ++L+ M +R VTP+ + +I++ G+
Sbjct: 291 LAVMMK-KNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFC 349
Query: 262 KAGMFDQMERVLSGMLESATCK---PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
K M D+ + + E CK P+V T N+++ G+ ++ + G
Sbjct: 350 KIKMVDEAMK----LFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQP 405
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
T+N ++ A K DK ++ +++ TY +I +G +
Sbjct: 406 SNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKV 465
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
FE + +G + T+ LING+ N G F
Sbjct: 466 FEDLLVKGYSPNIYTYTSLINGFCNKGFF------------------------------- 494
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
D+ + M +MK+ C P++ T+ I+ + ++ NDK L +E +
Sbjct: 495 -DEGLAM---LSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMI 540
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/309 (17%), Positives = 128/309 (41%), Gaps = 36/309 (11%)
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
P + ++ + + A +++ +L Q M+ + P+ +T N+++ + + G V
Sbjct: 56 PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
+ +L+ PD T ++ KG+V +++K G + ++ LI
Sbjct: 116 FAKILKKGY-HPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLC 174
Query: 333 K-----------KRMYDKM--------SSVMEYMRKLQFPWTS----------------S 357
+ +R+ K+ S++++ M K + +
Sbjct: 175 RVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVV 234
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
TY+++I F +G K+ F +M ++ + + TF LI+G+ G + + + +
Sbjct: 235 TYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVM 294
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
K + +V YN+++ + + + ++ M ++ PD ++SIM + K M
Sbjct: 295 MKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMV 354
Query: 478 DKVYALEQE 486
D+ L +E
Sbjct: 355 DEAMKLFEE 363
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ + +KE+ QP TY L+ L K G+ + A+KVF +++ +G P YT+L
Sbjct: 426 KAIVLLTKIKEKGI-QPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSL 484
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +C DE L++MK C P+ TY LI + + + E L ++M R
Sbjct: 485 INGFCNKGFFDEGLAMLSKMKD-NGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARG 543
Query: 246 V 246
+
Sbjct: 544 L 544
>gi|302821471|ref|XP_002992398.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
gi|300139814|gb|EFJ06548.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
Length = 698
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 163/360 (45%), Gaps = 6/360 (1%)
Query: 133 MLKEQPFY--QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYC 190
+L+E +Y +P Y LL + GQ + V + + G+ Y L+ AY
Sbjct: 304 LLEEMKWYGLRPNLKAYNTLLGGYSRKGQLQQIDTVKTLLRDTGMSINKITYCLLIDAYA 363
Query: 191 RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT 250
R L+D +M+ + +P+ Y Y+ +I D +++ L ++M + VTP+
Sbjct: 364 RAGLMDRLEALYQEMRDC-DIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQAGVTPDA 422
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYE 310
N+++ +G+ +Q R+ ++ +PDV + N+++ GQ + Y
Sbjct: 423 HVYNVIINTFGRTRQLEQA-RIAFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEARKLYY 481
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR-KLQFPWTSSTYNNVIEAFSDM 369
K N G P +TFNI+I G+ + ++ ++ ++E MR K FP TY +++ ++
Sbjct: 482 KMVNDGCAPTAQTFNIVIHGLGEHKRWNDVNEMVEEMRSKGMFP-NVVTYTTLVDVYAQA 540
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFY 429
+ + M +GM + L N YA G+ + + ++ K I N++
Sbjct: 541 RLFQDAVECLQTMKEDGMGPSPTAYSALANAYAQLGMCEQTLHVLQTMEKENIEINLAML 600
Query: 430 NAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
N +I+A A E V++ +KE D T++ + +A + D+V + E ++
Sbjct: 601 NLLINAFSMAGRSQEAFAVFEYIKEAGLTADKITYTTLMKALIRAEKLDEVSGVFDEMIK 660
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 140/304 (46%), Gaps = 21/304 (6%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET----- 236
Y AL+ AY +N +A TL++MKTL PDV +Y+ +I+AC R +++
Sbjct: 179 YNALVGAYAQNRDYGKALETLSKMKTL-GFPPDVVSYTHVIQAC----RHGVVDIYTGFR 233
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKA-----GMFDQMERVLSGMLESATCKPDVWTMNT 291
L+Q+M V + N ++ G+A GMF + SG++ D + +
Sbjct: 234 LFQEMQAEGVQVDGKVYNDLIFACGQAHKPNEGMFFLEKLQASGLV------ADRDSYIS 287
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
++ G+ E E+ + +G+ P + +N L+G Y +K ++ +V +R
Sbjct: 288 LMLSLGKHGRTAEAEALLEEMKWYGLRPNLKAYNTLLGGYSRKGQLQQIDTVKTLLRDTG 347
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI 411
TY +I+A++ G +E +++M ++ +T + +I Y + G + K +
Sbjct: 348 MSINKITYCLLIDAYARAGLMDRLEALYQEMRDCDIRPNTYMYARMITIYRDTGQWQKGV 407
Query: 412 SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
+R + + + YN +I+ + L + + +M++ PD +++ + +A
Sbjct: 408 KLLREMQQAGVTPDAHVYNVIINTFGRTRQLEQARIAFFKMQDGGIEPDVVSWNSLIDAC 467
Query: 472 AKEG 475
K G
Sbjct: 468 CKAG 471
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 117/282 (41%), Gaps = 55/282 (19%)
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANK-GQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
+L + E++ C+ T + + SV + G+ + + E G + + R +N L+GA
Sbjct: 130 LLEWLRENSFCR----TYDVLDSVVIHGYGRERKLHKALEVAEKLGSNLQRRGYNALVGA 185
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS-DMGDAKHMEYTFEQMHAEGMKA 389
Y + R Y K + M+ L FP +Y +VI+A + D F++M AEG++
Sbjct: 186 YAQNRDYGKALETLSKMKTLGFPPDVVSYTHVIQACRHGVVDIYTGFRLFQEMQAEGVQV 245
Query: 390 DTKT-----FCCLINGYANAGLF--HKVISSVRLASK----------------------- 419
D K F C N G+F K+ +S +A +
Sbjct: 246 DGKVYNDLIFACGQAHKPNEGMFFLEKLQASGLVADRDSYISLMLSLGKHGRTAEAEALL 305
Query: 420 -----LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
+ N+ YN ++ + L +++ V +++ + T+ ++ +AYA+
Sbjct: 306 EEMKWYGLRPNLKAYNTLLGGYSRKGQLQQIDTVKTLLRDTGMSINKITYCLLIDAYARA 365
Query: 475 GMNDKVYALEQE--------------KLQMLLEASGHWQQNI 502
G+ D++ AL QE ++ + +G WQ+ +
Sbjct: 366 GLMDRLEALYQEMRDCDIRPNTYMYARMITIYRDTGQWQKGV 407
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 108/249 (43%), Gaps = 10/249 (4%)
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME--RWYEK 311
N ++G Y + + + LS M ++ PDV + ++ G VD+ R +++
Sbjct: 180 NALVGAYAQNRDYGKALETLSKM-KTLGFPPDVVSYTHVIQA-CRHGVVDIYTGFRLFQE 237
Query: 312 FRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ---FPWTSSTYNNVIEAFSD 368
+ G+ + + +N LI A G+ K + M ++ KLQ +Y +++ +
Sbjct: 238 MQAEGVQVDGKVYNDLIFACGQAH---KPNEGMFFLEKLQASGLVADRDSYISLMLSLGK 294
Query: 369 MGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSF 428
G E E+M G++ + K + L+ GY+ G ++ + L ++ N
Sbjct: 295 HGRTAEAEALLEEMKWYGLRPNLKAYNTLLGGYSRKGQLQQIDTVKTLLRDTGMSINKIT 354
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
Y +I A +A + +E +Y+ M++ RP++ ++ M Y G K L +E
Sbjct: 355 YCLLIDAYARAGLMDRLEALYQEMRDCDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQ 414
Query: 489 QMLLEASGH 497
Q + H
Sbjct: 415 QAGVTPDAH 423
>gi|115444491|ref|NP_001046025.1| Os02g0170000 [Oryza sativa Japonica Group]
gi|49388067|dbj|BAD25179.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535556|dbj|BAF07939.1| Os02g0170000 [Oryza sativa Japonica Group]
Length = 397
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 148/332 (44%), Gaps = 3/332 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E TY LL +G A V +EM E GI P +Y A L + ++A
Sbjct: 10 PTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEV 69
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+MK C+ + T++ +I A + ++ +M PN T ++ +
Sbjct: 70 YQRMKR-ERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFA 128
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G+ ++ E V M + A +PDV+ N ++ ++ G + ++ G +P+
Sbjct: 129 REGLCEKAEEVFEEM-QQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDR 187
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
++NIL+ AYG+ +++ +V E +++ T ++ ++ A + G+A E Q
Sbjct: 188 ASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQ 247
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
+H G+ DT ++N YA AG + + A + + +V YN ++A +A
Sbjct: 248 LHKSGLTPDTFALNAMLNAYARAGRLDD-MERLFAAMERRGDADVGTYNVAVNAYGRAGY 306
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ ME + + + D T++ AYA+
Sbjct: 307 VGRMEAAFAAVAARGLAADVVTWTARMGAYAR 338
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 143/308 (46%), Gaps = 7/308 (2%)
Query: 170 MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK--TLPNCQPDVYTYSTLIKACVD 227
++E PT + Y LL AYC + A +++M+ +P P+ Y+ + +
Sbjct: 3 LLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIP---PNATVYNAYLDGLLK 59
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
A E +YQ M NT T +++ YGKA +V + M +S CKP++
Sbjct: 60 ARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEM-KSIGCKPNIC 118
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T +++ FA +G + E +E+ + G +P+ +N L+ AY + + S + M
Sbjct: 119 TYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLM 178
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
+ + ++YN +++A+ G + E FE++ GM K+ L+ +A +G
Sbjct: 179 QHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNA 238
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ + K + + NA+++A +A L +MER++ M E+ D T+++
Sbjct: 239 TRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAM-ERRGDADVGTYNVA 297
Query: 468 TEAYAKEG 475
AY + G
Sbjct: 298 VNAYGRAG 305
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 123/246 (50%), Gaps = 10/246 (4%)
Query: 99 ERKAKAKAWVNTVAETFSDHV----LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLL 154
+R + + NT ETF+ + KQ +++VF +K +P TY L+
Sbjct: 71 QRMKRERCRANT--ETFTLMINVYGKAKQPMSSMKVFNEMKSIGC-KPNICTYTALVNAF 127
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
+ G E A +VF EM + G EP Y AL+ AY R L A + M+ + C+PD
Sbjct: 128 AREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHM-GCEPD 186
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
+Y+ L+ A A E E +++++ +R ++P + ++L + ++G + E V++
Sbjct: 187 RASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMA 246
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
+ +S PD + +N +L+ +A G++D MER + G D + T+N+ + AYG+
Sbjct: 247 QLHKSGL-TPDTFALNAMLNAYARAGRLDDMERLFAAMERRG-DADVGTYNVAVNAYGRA 304
Query: 335 RMYDKM 340
+M
Sbjct: 305 GYVGRM 310
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 122/286 (42%), Gaps = 6/286 (2%)
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
C P TY+ L++A +A E + +M E + PN N L G KA ++
Sbjct: 8 CVPTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAV 67
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
V M + C+ + T +++V+ Q + + + ++ G P T+ L+ A
Sbjct: 68 EVYQRM-KRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNA 126
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
+ ++ + +K V E M++ YN ++EA+S G + F M G + D
Sbjct: 127 FAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPD 186
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYK 450
++ L++ Y AGL + + ++ + + +++A ++ + E V
Sbjct: 187 RASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMA 246
Query: 451 RMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
++ + PD+ + M AYA+ G D + E+L +E G
Sbjct: 247 QLHKSGLTPDTFALNAMLNAYARAGRLD-----DMERLFAAMERRG 287
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 89/213 (41%)
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
L A C P T +L + N G + E + R GI P +N + K R
Sbjct: 3 LLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARC 62
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
+K V + M++ + + T+ +I + F +M + G K + T+
Sbjct: 63 TEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTA 122
Query: 397 LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
L+N +A GL K + +V YNA++ A +A ++ M+
Sbjct: 123 LVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMG 182
Query: 457 CRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
C PD +++I+ +AY + G+++ A+ +E Q
Sbjct: 183 CEPDRASYNILVDAYGRAGLHEDAEAVFEELKQ 215
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 96/229 (41%), Gaps = 40/229 (17%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
N + E +S L + A ++F +++ +P +Y L+ G++G E A VF
Sbjct: 156 NALMEAYSRAGLPQG---ASEIFSLMQHMGC-EPDRASYNILVDAYGRAGLHEDAEAVFE 211
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
E+ + G+ PT + + LLAA+ R+ + Q+ PD + + ++ A A
Sbjct: 212 ELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHK-SGLTPDTFALNAMLNAYARA 270
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS-------------- 274
R + +E L+ M+ R + T N+ + YG+AG +ME +
Sbjct: 271 GRLDDMERLFAAMERRG-DADVGTYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADVVTW 329
Query: 275 -----------------GMLE---SATCKPDVWTMNTILSVFANKGQVD 303
GM+E A C PD T +L+ +++ QV+
Sbjct: 330 TARMGAYARRKEYGRCVGMVEEMVDAGCYPDAGTARVLLAACSDERQVE 378
>gi|413926076|gb|AFW66008.1| hypothetical protein ZEAMMB73_411794 [Zea mays]
Length = 633
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 149/376 (39%), Gaps = 39/376 (10%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QA QVFE +K Q + P TY L+ + GK+G+ + EMV EG Y +
Sbjct: 236 QAYQVFEDMK-QNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEMVSEGCVLNLIAYNTV 294
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A +N ++DEA L++M +C+P+ +TYS ++ + + L + +D S
Sbjct: 295 IEALGKNKMVDEAIFMLSKMIE-SDCRPNQFTYSIMLDVLSTGGQ---LHRLNEILDICS 350
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES--------------ATCKP------- 284
N + ++ K+G + V M S A C
Sbjct: 351 GCLNRPVYSYLIKALCKSGHASEAHSVFCRMWNSHEKGDRYAFVSMLEALCNAEKTTEAI 410
Query: 285 -------------DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
DV N I S QV M Y+ R G+ P+ T+NI+I ++
Sbjct: 411 DLLHMMPEKGITTDVGMYNMIFSALGKLKQVSFMSSLYDTMRANGVVPDVFTYNIMISSF 470
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
G+ + DK S + E M TYN++I GD F+ M +G D
Sbjct: 471 GRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDV 530
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
T+ LI + + S N+ YN ++ + E + Y+
Sbjct: 531 FTYSILIECFGKSNKVDMACSLFDEMVAQGCIPNIVTYNILLDCLERRGKTTEAHKFYET 590
Query: 452 MKEKHCRPDSETFSIM 467
+K++ PDS T+SI+
Sbjct: 591 LKQQGLTPDSITYSIL 606
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 142/357 (39%), Gaps = 40/357 (11%)
Query: 165 KVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
+V+ +M +G + Y LL A + ++D+A+ MK C PD YTY+ LI+
Sbjct: 204 EVYEKMRRKGYKLDIFAYNMLLNALAKAGMVDQAYQVFEDMKQ-NYCDPDAYTYTILIRM 262
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
A + +L ++M N + N V+ GK M D+ +LS M+ES C+P
Sbjct: 263 SGKAGKTTKFVSLLEEMVSEGCVLNLIAYNTVIEALGKNKMVDEAIFMLSKMIES-DCRP 321
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK---------- 334
+ +T + +L V + GQ+ + + P ++ LI A K
Sbjct: 322 NQFTYSIMLDVLSTGGQLHRLNEILDICSGCLNRP---VYSYLIKALCKSGHASEAHSVF 378
Query: 335 -RMYD------------------------KMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
RM++ + ++ M + YN + A +
Sbjct: 379 CRMWNSHEKGDRYAFVSMLEALCNAEKTTEAIDLLHMMPEKGITTDVGMYNMIFSALGKL 438
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFY 429
M ++ M A G+ D T+ +I+ + GL K +V Y
Sbjct: 439 KQVSFMSSLYDTMRANGVVPDVFTYNIMISSFGRVGLVDKASELFEEMEDGSCKPDVVTY 498
Query: 430 NAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
N++I+ K DL E ++K M+EK PD T+SI+ E + K D +L E
Sbjct: 499 NSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDE 555
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 79/192 (41%), Gaps = 8/192 (4%)
Query: 285 DVWTMNTILSVFANKGQ-VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
++ T+N ++ + G+ +D+ +W + + T+ L+ A+ + R K V
Sbjct: 153 NISTVNLLVGMGVEVGRCLDLASKWGLRLNGY-------TYKCLVQAHLRSREVWKGFEV 205
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
E MR+ + YN ++ A + G FE M D T+ LI
Sbjct: 206 YEKMRRKGYKLDIFAYNMLLNALAKAGMVDQAYQVFEDMKQNYCDPDAYTYTILIRMSGK 265
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
AG K +S + N+ YN VI A K + E + +M E CRP+ T
Sbjct: 266 AGKTTKFVSLLEEMVSEGCVLNLIAYNTVIEALGKNKMVDEAIFMLSKMIESDCRPNQFT 325
Query: 464 FSIMTEAYAKEG 475
+SIM + + G
Sbjct: 326 YSIMLDVLSTGG 337
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 7/139 (5%)
Query: 352 FPWTSSTYNNV-IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
F + +YN + + FS+ D +M +G+ + T L+ G+ +V
Sbjct: 114 FRHDAFSYNRILVLLFSNRADPAEAMRLIAEMERDGVPGNISTVNLLV------GMGVEV 167
Query: 411 ISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
+ LASK + N Y ++ A +++ ++ + VY++M+ K + D ++++ A
Sbjct: 168 GRCLDLASKWGLRLNGYTYKCLVQAHLRSREVWKGFEVYEKMRRKGYKLDIFAYNMLLNA 227
Query: 471 YAKEGMNDKVYALEQEKLQ 489
AK GM D+ Y + ++ Q
Sbjct: 228 LAKAGMVDQAYQVFEDMKQ 246
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 158/392 (40%), Gaps = 16/392 (4%)
Query: 98 LERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKS 157
+ER+ +K + N V DH K + + F+ +K +PK+ + L+ GK
Sbjct: 157 VEREKASKGFRNLV----EDH--PKDARKVVDAFKRIK-----KPKQRDHTLLVNYYGKR 205
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
G AR F M GIEP YT L+ AY + A + +M+ P+ T
Sbjct: 206 GDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEA-EGVSPNAAT 264
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
YS +I E E +Q + N V N ++ Y KAG ++ E +++ M
Sbjct: 265 YSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAME 324
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR---NFGIDPETRTFNILIGAYGKK 334
E + + N ++ + + VD + + + G+ P ++ LI Y K
Sbjct: 325 EQGL-EATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKL 383
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
DK + M TY+ +I+ + +GD + FE M G+K D T+
Sbjct: 384 GKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITY 443
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
L+N + G ++ + + + Y +I +K DL + MK
Sbjct: 444 NILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKM 503
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
RP + T++++ A+ G D+ ++ E
Sbjct: 504 AGFRPSAATYNVIMHGLAQAGQMDRAASIIDE 535
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 163/385 (42%), Gaps = 13/385 (3%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+ALQ+ +++Q ++ TY ++ + G A VF +M GI+P Y L
Sbjct: 388 KALQISNEMEDQGIKHNRK-TYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNIL 446
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ A+C+N ++ A L +M++ +C P + TY+ +I + + +DM
Sbjct: 447 MNAFCKNGQMNRALELLARMES-GDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAG 505
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
P+ T N+++ G +AG D+ ++ M+ A P+ + T++ +A G + +
Sbjct: 506 FRPSAATYNVIMHGLAQAGQMDRAASIIDEMV-VAGVHPNERSYTTLIEGYACIGDMGLA 564
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+++ + + G+ P+ + L+ A K ++ M P + YN +++
Sbjct: 565 FKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDG 624
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
++ GD ++M EG+ D ++ IN AG K ++ + + N
Sbjct: 625 WAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPN 684
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF-SIMTE-----AYAKEGMNDK 479
+ Y +I A + Y MK PD + IMT A A+E + D
Sbjct: 685 LQAYTTLIHGWASASYPEKALICYDEMKSAGMIPDKPLYHCIMTSLLSRAAVARETVFDG 744
Query: 480 VYALEQEKLQMLL----EASGHWQQ 500
V + E + + + HWQ+
Sbjct: 745 VLRVTSEMVDQGICVDFATAKHWQR 769
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 143/355 (40%), Gaps = 19/355 (5%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY ++ G+ G E A + F + E +Y ++ AYC+ ++ A
Sbjct: 260 PNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAI 319
Query: 202 LNQMK--------TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQ 253
+ M+ L N D Y + + C++ R T E ++P V+
Sbjct: 320 MTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKART------ETGLSPTVVSY 373
Query: 254 NIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
++ Y K G D+ ++ S +E K + T + I+ + G +E
Sbjct: 374 GCLINLYSKLGKMDKALQI-SNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMS 432
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
N GI P+ T+NIL+ A+ K ++ ++ M P T TY +I+ F +GD +
Sbjct: 433 NAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLR 492
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
T M G + T+ +++G A AG + S + + N Y +I
Sbjct: 493 MAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLI 552
Query: 434 S--ACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
ACI D+ + + R+KE +PD ++ + +A K G A+ E
Sbjct: 553 EGYACIG--DMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAE 605
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 69/153 (45%), Gaps = 1/153 (0%)
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
V++ ++++ P + ++ + GD FE M A G++ + ++ LI+ YA
Sbjct: 180 VVDAFKRIKKP-KQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYA 238
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
A I+ V ++ N + Y+ +IS + D+ ER ++R ++ +
Sbjct: 239 VAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDV 298
Query: 463 TFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
++ + AY K G ++ A+ + LEA+
Sbjct: 299 IYNNIIHAYCKAGNMERAEAIMTAMEEQGLEAT 331
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 139/343 (40%), Gaps = 3/343 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEE-GIEPTPELYTALLAAYCRNSLIDEAFV 200
P TY L++ L ++G A +F +M G YT L+ C ID+A
Sbjct: 123 PDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACR 182
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M + C+P V+TY+ L+ R E L +M + V PN VT N ++GG
Sbjct: 183 VFAKM-SRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGL 241
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ G FD + ++L M E PD WT ++ G+V + + G+ E
Sbjct: 242 CQEGRFDDVTKLLEKM-EIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALE 300
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+N LI Y K V++ M++ + T+N VI F G
Sbjct: 301 VLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLT 360
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
QM G+ +T TF LI+G + G + + L + + + Y I A
Sbjct: 361 QMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEG 420
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
L E ++ + K + + ++ + Y + G D + L
Sbjct: 421 QLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGL 463
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 144/347 (41%), Gaps = 9/347 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
A +VF + + + +P TY LL L K + A + EMV +G+ P Y AL
Sbjct: 179 DACRVFAKM-SRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNAL 237
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ D+ L +M+ + PD +TY+ ++ + + + +
Sbjct: 238 IGGLCQEGRFDDVTKLLEKMEIQRH-SPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKG 296
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
V +T N ++ GY K G VL +++ P V T N ++ F G+V
Sbjct: 297 VALEVLTYNALINGYCKGGDMKAALDVLQ-LMKRNRVNPGVQTFNEVIHGFCCGGKVHKA 355
Query: 306 ERWYEKFRNFGIDPETRTFNILIG---AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ + G+ P T TFN LI + G++++ ++ +ME L TY
Sbjct: 356 MAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLP---DRQTYAIF 412
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I+A D G + F + +G+KA + L++GY G + +
Sbjct: 413 IDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENC 472
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+V YN +I K L + +MK++ P + TF+I+ +
Sbjct: 473 MPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIK 519
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 138/298 (46%), Gaps = 29/298 (9%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL++ ++++E P TY + L GQ E A +F+ + +GI+ +YT+L+
Sbjct: 390 ALRLLDLMEEYGVL-PDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLV 448
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
YC+ ID AF + +M + NC PDV+TY+TLI R + L M ++ +
Sbjct: 449 HGYCQVGDIDSAFGLMEKMAS-ENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGI 507
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE---SATCKPD--VWTMNTILSVFANKGQ 301
P T T NI++ K ++D+ + M E S+ CKPD +T+ F +
Sbjct: 508 EPTTCTFNILI----KQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATK 563
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW--TSSTY 359
+ ++ + G+ P+ T+N +I AY + +K + +++ L P +TY
Sbjct: 564 EENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEK--AFFAHVKMLSVPIDPDCTTY 621
Query: 360 NNVI---------EAFSD-----MGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
+ ++ +AF + M D ++++ FEQM T+ L+ G N
Sbjct: 622 SILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCN 679
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 133/342 (38%), Gaps = 1/342 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ K AR M E G+ P Y L+ CR L+ A
Sbjct: 88 PNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGL 147
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
QM D Y+Y+ LIK A R + ++ M P T ++L G
Sbjct: 148 FVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLC 207
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K + E +L M+ P+V T N ++ +G+ D + + EK P+
Sbjct: 208 KVRRVGEAEALLGEMVNKGV-VPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDC 266
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+ ++ K + V+ TYN +I + GD K +
Sbjct: 267 WTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQL 326
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M + +TF +I+G+ G HK ++ + + ++ N +N++IS +
Sbjct: 327 MKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGE 386
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
R+ M+E PD +T++I +A EG ++ ++L
Sbjct: 387 RKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSL 428
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 159/360 (44%), Gaps = 20/360 (5%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL V +++K P T+ +++ G+ A +M G+ P + +L+
Sbjct: 320 ALDVLQLMKRNRV-NPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLI 378
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
+ C A L+ M+ PD TY+ I A D + E +L+ + + +
Sbjct: 379 SGQCSVGERKIALRLLDLMEEY-GVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGI 437
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
+ V ++ GY + G D ++ M S C PDV T NT++ ++D
Sbjct: 438 KAHNVIYTSLVHGYCQVGDIDSAFGLMEKM-ASENCMPDVHTYNTLIDGLCKVKRLDRAI 496
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK----MSSVMEYMRKLQFPWTSSTYNNV 362
+K + GI+P T TFNILI K+ ++DK + + E M TY
Sbjct: 497 DLLDKMKKQGIEPTTCTFNILI----KQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLK 552
Query: 363 IEA--FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV-ISSVRLASK 419
I F ++++ +MH G+ D +T+ +I Y +AGL K + V++ S
Sbjct: 553 ISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLS- 611
Query: 420 LQIAENVSFYNAVIS-ACIKAD-DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
+ I + + Y+ +++ C K D D + E+++K + ++ + E F M E+ A G++
Sbjct: 612 VPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQ---ELFEQMCESDAAPGIS 668
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 159/388 (40%), Gaps = 46/388 (11%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
+ P TY +++ L K G+ KV +E + +G+ Y AL+ YC+ + A
Sbjct: 262 HSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAAL 321
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
L MK P V T++ +I C + + L Q M ++PNTVT N ++
Sbjct: 322 DVLQLMKR-NRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQ-MAGAGLSPNTVTFNSLIS 379
Query: 259 GYGKAG-------MFDQMER--VL---------------SGMLESA----TCKP--DVWT 288
G G + D ME VL G LE A +C P +
Sbjct: 380 GQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKA 439
Query: 289 MNTILSV----FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
N I + + G +D EK + P+ T+N LI K + D+ ++
Sbjct: 440 HNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLL 499
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT--FEQMHAEGMKADTKTFCCLI--NG 400
+ M+K T+ T+N +I+ + D KH + +EQM + G K D +T+ I +
Sbjct: 500 DKMKKQGIEPTTCTFNILIKQM--LWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDW 557
Query: 401 YANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
+ A + +V + + +V YNA+I A + A + + +M PD
Sbjct: 558 FEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPD 617
Query: 461 SETFSIMTEAYAKEGMNDKVYALEQEKL 488
T+SI+ + +D A + EK+
Sbjct: 618 CTTYSILLNYMCNKDDSD---AFDNEKI 642
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 145/335 (43%), Gaps = 2/335 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY ++ + +SG LA + +M E ++ Y+ ++ + CR+ ID A
Sbjct: 190 QPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M+T + V TY++L++ A ++ L +DM R + PN +T N++L +
Sbjct: 250 LFKEMET-KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + + M+ P++ T NT++ + + ++ + P+
Sbjct: 309 VKEGKLQEANELYKEMITRGI-SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
TF LI Y + D V + K + TY+ +++ F G K E F+
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M + G+ D T+ L++G + G K + K ++ + Y +I K
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + ++ + K +P+ T+++M K+G
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 522
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/416 (20%), Positives = 163/416 (39%), Gaps = 66/416 (15%)
Query: 54 SFSSESAVAAKKRLWKEGEYPGVSETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAE 113
S + + A L+KE E G+ ++S+ Y S L + L KA W N A
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGI-KSSVVTYNS-------LVRGL---CKAGKW-NDGAL 284
Query: 114 TFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE 173
D V ++ P T+ LL + K G+ + A +++ EM+
Sbjct: 285 LLKDMVSRE-----------------IVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
GI P Y L+ YC + + EA L+ M C PD+ T+++LIK R +
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLM-VRNKCSPDIVTFTSLIKGYCMVKRVDD 386
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
+++++ +R + N VT +I++ G
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQG---------------------------------- 412
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFP 353
F G++ + E +++ + G+ P+ T+ IL+ +K + E ++K +
Sbjct: 413 --FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470
Query: 354 WTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISS 413
Y +IE G + F + +G+K + T+ +I+G G +
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530
Query: 414 VRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+R + A N YN +I A ++ DL ++ + MK D+ + ++ +
Sbjct: 531 LRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/358 (19%), Positives = 154/358 (43%), Gaps = 19/358 (5%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
A+ +F EM++ +P P + + + ++ Q L ++ GI
Sbjct: 71 DAIALFQEMIRSRPL--PGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 128
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
++ +CR A+ L ++ L +PD T++TLI + L M E
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGY-EPDTTTFNTLINGLCLEGKVSKAVVLVDRMVEN 187
Query: 245 SVTPNTVTQNIVLGGYGKAG----MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
P+ VT N ++ G ++G FD + + +E K DV+T +TI+ G
Sbjct: 188 GCQPDMVTYNSIVNGICRSGDTSLAFDMLRK-----MEERNVKADVFTYSTIIDSLCRDG 242
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+D +++ GI T+N L+ K ++ + +++ M + T+N
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+++ F G + +++M G+ + T+ L++GY + + + L +
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Query: 421 QIAENVSFYNAVISA-CI--KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + ++ + ++I C+ + DD M +V++ + ++ ++ T+SI+ + + + G
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGM---KVFRNISKRGLVANAVTYSILVQGFCQSG 417
>gi|302763707|ref|XP_002965275.1| hypothetical protein SELMODRAFT_83272 [Selaginella moellendorffii]
gi|300167508|gb|EFJ34113.1| hypothetical protein SELMODRAFT_83272 [Selaginella moellendorffii]
Length = 445
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 156/337 (46%), Gaps = 13/337 (3%)
Query: 157 SGQPELARKVFNEMVEEGIEPTP--ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
+G+ + A+++ E + G+ P L+ +L + L+DEA L++M +C+P+
Sbjct: 27 AGEFDEAKRLVAEFKDTGMSPGSLVVLHNLMLKGFSEARLVDEAKSHLHRM----DCKPN 82
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
+Y+TLI A + R + Q M +R V PN VT N + G GKAG+ D+ ++
Sbjct: 83 SVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMATGLGKAGLLDEAFELM- 141
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
G++ESA T N ++ G+ D + E I+P T N+++ A+ K
Sbjct: 142 GVMESAGFALTAVTFNPVVEFLCKSGKPDEACKVMETMLLRNIEPNILTLNLILHAFCKA 201
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
++ + + M ++ F T T+N ++E F + E M K + T+
Sbjct: 202 ARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAELLETMARSKCKPNFVTY 261
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQI---AENVSFYNAVISACIKADDLMEMERVYKR 451
++ +A G +++ + +L + A N+ NA ++ K ++ R
Sbjct: 262 SIMVQKFAEMG---RMVEARAFLEQLVVCGYAPNLLVCNAYVAGLCKTGEMDLASRFLTV 318
Query: 452 MKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
M E+ CR ++ T++ + E + K G D+ + +E +
Sbjct: 319 MAEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMI 355
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 144/356 (40%), Gaps = 45/356 (12%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P +Y L+ L SG+ + AR+ M + G+ P Y A+ + L+DEAF
Sbjct: 80 KPNSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMATGLGKAGLLDEAFE 139
Query: 201 TLNQMKT----------------------------------LPNCQPDVYTYSTLIKACV 226
+ M++ L N +P++ T + ++ A
Sbjct: 140 LMGVMESAGFALTAVTFNPVVEFLCKSGKPDEACKVMETMLLRNIEPNILTLNLILHAFC 199
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
A R E + M E P VT N +L + D +L M S CKP+
Sbjct: 200 KAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAELLETMARS-KCKPNF 258
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
T + ++ FA G++ + E+ G P N + K D S +
Sbjct: 259 VTYSIMVQKFAEMGRMVEARAFLEQLVVCGYAPNLLVCNAYVAGLCKTGEMDLASRFLTV 318
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG- 405
M + ++TYN+++E F +G E E+M AEG D+ T+ LI G +AG
Sbjct: 319 MAEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDSTTYSVLIQGLCSAGQ 378
Query: 406 LFHKVISSVRLASKLQIA--ENVSFYNAVISACIKADDLMEMER---VYKRMKEKH 456
+ H + +++ ++ A + +F + C +L EM+R V +RM ++H
Sbjct: 379 IVHAFMVMLQVTRAVESARPDPATFVKLIEKLC----ELGEMDRAALVLERMGDEH 430
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 115/272 (42%), Gaps = 6/272 (2%)
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT--VTQNIVLGGYGKA 263
KTL +TY TL+ A F+ + L + + ++P + V N++L G+ +A
Sbjct: 5 KTLGEFVHSEFTYGTLVHGHCLAGEFDEAKRLVAEFKDTGMSPGSLVVLHNLMLKGFSEA 64
Query: 264 GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
+ D+ + L M CKP+ + NT++ + G++ + G+ P T
Sbjct: 65 RLVDEAKSHLHRM----DCKPNSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVT 120
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
+N + GK + D+ +M M F T+ T+N V+E G E M
Sbjct: 121 YNAMATGLGKAGLLDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGKPDEACKVMETML 180
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
++ + T +++ + A + + + ++ + +NA++ D +
Sbjct: 181 LRNIEPNILTLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMD 240
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + M C+P+ T+SIM + +A+ G
Sbjct: 241 SAAELLETMARSKCKPNFVTYSIMVQKFAEMG 272
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 172/409 (42%), Gaps = 48/409 (11%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL++F + ++P + P+ Y ++L+ LG+SG + +K+ +M E + L+
Sbjct: 66 ALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILI 125
Query: 187 AAYCRNSLIDEA--------------------------FVTLNQMKTLP---------NC 211
+Y + L DE V N +K +
Sbjct: 126 ESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGI 185
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
+PDV T++ LIKA A + + +DM + P+ T V+ GY + G D R
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR 245
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRN-FGIDPETRTFNILIGA 330
+ M+E C ++N I+ F +G+V+ + ++ N G P+ TFN L+
Sbjct: 246 IREQMVEFG-CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
K +M+ M + + TYN+VI +G+ K +QM +
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN 364
Query: 391 TKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA-CIKADDLMEMERVY 449
T T+ LI+ + R+ + I +V +N++I C+ + + ME ++
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME-LF 423
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQML--LEASG 496
+ M+ K C PD T++++ ++ +G D E L ML +E SG
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLD-------EALNMLKQMELSG 465
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 141/338 (41%), Gaps = 9/338 (2%)
Query: 106 AWVNTVAETFSDHVLKKQWFQ-ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELAR 164
+W N K+ + AL + + Q + P + T+ L+ L K+G + A
Sbjct: 256 SWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAI 315
Query: 165 KVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
++ + M++EG +P Y ++++ C+ + EA L+QM T +C P+ TY+TLI
Sbjct: 316 EIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT-RDCSPNTVTYNTLIST 374
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE---SAT 281
+ E L + + + + P+ T N ++ G + RV + E S
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL----CLTRNHRVAMELFEEMRSKG 430
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
C+PD +T N ++ +KG++D ++ G T+N LI + K +
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAE 490
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
+ + M S TYN +I+ + +QM EG K D T+ L+ +
Sbjct: 491 EIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHF 550
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
G K V+ + ++ Y +IS KA
Sbjct: 551 CRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 104/242 (42%), Gaps = 16/242 (6%)
Query: 93 NLKKKLERKAKAKAWV--NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKL 150
N+ K++E A++ + NT+ + F + +A ++F+ ++ + TY L
Sbjct: 456 NMLKQMELSGCARSVITYNTLIDGFCK---ANKTREAEEIFDEMEVHGVSR-NSVTYNTL 511
Query: 151 LVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPN 210
+ L KS + E A ++ ++M+ EG +P Y +LL +CR I +A + Q T
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKA-ADIVQAMTSNG 570
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
C+PD+ TY TLI A R E+ L + + + + N V+ G + +
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAI 630
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKG-----QVDMMERWYEKFRNFGIDPETRTFN 325
+ MLE PD + + N G VD + EK G PE +
Sbjct: 631 NLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEK----GFVPEFSSLY 686
Query: 326 IL 327
+L
Sbjct: 687 ML 688
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 159/349 (45%), Gaps = 6/349 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP GT ++ L K+G+ + A + M++ G P ++ L+ C+ I EA
Sbjct: 371 QPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQE 430
Query: 201 TLNQM-KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM-DERSVTPNTVTQNIVLG 258
L M + + + ++Y++L+ + A + ++ M ERS P+ V+ +I++
Sbjct: 431 FLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILID 490
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
G+ K + E++ M++ C P+V T N L+ KG++ + YE+ G
Sbjct: 491 GFCKIDELGRAEKLYKQMID-LNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCS 549
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P+ T++ LI + R +D+ + E M + TYN ++
Sbjct: 550 PDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHEL 609
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV-RLASKLQIAENVSFYNAVISACI 437
F +M G D T+ L+ G+ N G + + + SK + V+ YN ++
Sbjct: 610 FRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVA-YNCLLKGFF 668
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK-EGMNDKVYALEQ 485
+A E +++++ M + C+PD+ + +IM + +K + ++D V E+
Sbjct: 669 RAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFER 717
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 126/285 (44%), Gaps = 2/285 (0%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y +LL + C+ + +AF + M + + PDV +YS LI E LY+ M
Sbjct: 449 YNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQM 508
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ + PN T N L G + G + V M+ +A C PDV T +T++ F+ +
Sbjct: 509 IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMV-AAGCSPDVITYSTLIHGFSLARK 567
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
D +E + G P T+N L+ K+ D+ + M + TY
Sbjct: 568 HDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTT 627
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
++ F ++G + F++M ++G D + CL+ G+ AG + ++ Q
Sbjct: 628 LLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQ 687
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKH-CRPDSETFS 465
+ +N +I KA L + V++RM++ H C PD T++
Sbjct: 688 CKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYN 732
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 5/222 (2%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
+T+ FS L ++ QA ++FE + + +P TY LL L K +P+ A ++F
Sbjct: 556 STLIHGFS---LARKHDQAHELFETMISRG-CRPNAVTYNCLLHGLCKESKPDEAHELFR 611
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
+MVE G +P YT LL +C I++A ++M + + PDV Y+ L+K A
Sbjct: 612 KMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGH-DPDVVAYNCLLKGFFRA 670
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
+ + L+Q M R P+TV+ NI++ G KA D V M + C PD+ T
Sbjct: 671 GKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVT 730
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
N+++ + ++ + +++ + P+ FN+L+ A
Sbjct: 731 YNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 772
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 116/259 (44%), Gaps = 16/259 (6%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ + + + A ++F M+ G P Y LL C+ S DEA
Sbjct: 550 PDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHEL 609
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+M C PD TY+TL+ + + E ++ +M + P+ V N +L G+
Sbjct: 610 FRKM-VERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFF 668
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF-RNFGIDPE 320
+AG + +++ M+ S CKPD + N ++ + ++D +E+ ++ G P+
Sbjct: 669 RAGKPGEAKQLFQVMV-SRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPD 727
Query: 321 TRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
T+N LI G G++R+ + M V + + +L+ +N ++EA G E F
Sbjct: 728 LVTYNSLIFGLCGEQRLSEAM-KVFKEIDRLKLSPDPHAFNVLLEAIK-CGIVYQFEIRF 785
Query: 380 ----------EQMHAEGMK 388
E MHA G K
Sbjct: 786 KDPPAFNVLMEAMHAAGHK 804
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/329 (19%), Positives = 136/329 (41%), Gaps = 15/329 (4%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A K+F MV+ G +P +Y+ ++ A+C+ +DEAF +M + ++ +
Sbjct: 253 ASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFL 312
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA-- 280
+ + E + M E S++ + ++++ ++G D+ E LE A
Sbjct: 313 SGLCKSGKIEQAFEACRTMQE-SLSSSQPVYDMLIRLLIESGRIDKAE---EACLEIAGR 368
Query: 281 TCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
+P T ++++ G+VD E G P+ T ++LI K DK+
Sbjct: 369 NIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKA---DKI 425
Query: 341 SSVMEYMRKLQ-----FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE-GMKADTKTF 394
E+++ + + +YN+++ + F M +E D ++
Sbjct: 426 QEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSY 485
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
LI+G+ + + L NV+ YNA ++ ++ + + + VY+ M
Sbjct: 486 SILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVA 545
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
C PD T+S + ++ +D+ + L
Sbjct: 546 AGCSPDVITYSTLIHGFSLARKHDQAHEL 574
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 155/346 (44%), Gaps = 4/346 (1%)
Query: 131 FEMLKE-QPF-YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAA 188
F++L E + F + P Y L+ K G+ E A+ +F EM + G+ YT L+
Sbjct: 183 FDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHG 242
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP 248
+N + + F +M+ P++YTY+ ++ R + L+ +M ER V+
Sbjct: 243 LFKNGIKKQGFEMYEKMQE-DGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSC 301
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW 308
N VT N ++GG + ++ +V+ M +S P++ T NT++ F G++
Sbjct: 302 NIVTYNTLIGGLCREMKANEANKVMDQM-KSDGINPNLITYNTLIDGFCGVGKLGKALSL 360
Query: 309 YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD 368
++ G+ P T+NIL+ + KK V++ M + + TY +I+ F+
Sbjct: 361 CRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFAR 420
Query: 369 MGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSF 428
M + + M G+ D T+ LI+G+ G ++ +L ++ N
Sbjct: 421 MDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVI 480
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
YN ++ K R+++ M+EK P+ ++ M E KE
Sbjct: 481 YNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKE 526
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 149/354 (42%), Gaps = 3/354 (0%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
++ Q+F + + + E + K Y ++ +S + + FNEMV++G P
Sbjct: 70 IQSQFFTSSSLLHYVTESETSETKSRLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGS 129
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+ LL +S ++ + N+ K DVY++ +IK C +A E L
Sbjct: 130 NCFNNLLTFVVGSSSFNQWWRFFNESKI--KVDLDVYSFGIVIKGCCEAGEIEKSFDLLV 187
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
++ E +PN V ++ G K G ++ + + M + + WT ++
Sbjct: 188 ELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANE-WTYTVLIHGLFKN 246
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G YEK + G+ P T+N ++ + K + + MR+ TY
Sbjct: 247 GIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTY 306
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
N +I A +QM ++G+ + T+ LI+G+ G K +S R
Sbjct: 307 NTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKS 366
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
++ ++ YN ++S K D +V K M+E+ +P T++I+ + +A+
Sbjct: 367 RGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFAR 420
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 139/327 (42%), Gaps = 2/327 (0%)
Query: 144 EGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLN 203
E TY L+ L K+G + +++ +M E+G+ P Y ++ +C++ +AF +
Sbjct: 233 EWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFD 292
Query: 204 QMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKA 263
+M+ ++ TY+TLI M+ + M + PN +T N ++ G+
Sbjct: 293 EMRE-RGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGV 351
Query: 264 GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
G + L L+S P + T N ++S F KG + ++ GI P T
Sbjct: 352 GKLGK-ALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKIT 410
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
+ ILI + + +K + M +L TY+ +I F G F+ M
Sbjct: 411 YTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMV 470
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
A+ ++ + + ++ GY G ++ + R + ++ NV+ Y +I K
Sbjct: 471 AKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSK 530
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEA 470
E E + ++M + P ++++ A
Sbjct: 531 EAEGLVEKMIDTGIDPSDSILNLISRA 557
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 162/375 (43%), Gaps = 30/375 (8%)
Query: 105 KAWVNTVAETF---SDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPE 161
+A TV F D V ++WF +Q + + TY L+ L ++G+ +
Sbjct: 364 EAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGV-------TYTTLINGLCRAGELK 416
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTL 221
A KV EM+ ++ YT L+ YC+ + EAF N M P+V TY+ L
Sbjct: 417 EAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTM-VQRGVAPNVVTYTAL 475
Query: 222 IKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
+ L +M + + N T N ++ G KAG DQ R ++ M ++A
Sbjct: 476 SDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADM-DAAG 534
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
KPDV+T T++ G++D ++ + GI P T+N+L+ + +
Sbjct: 535 LKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGK 594
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
++E+M + ++TYN++++ + + K ++ M + ++ + T+ LI G+
Sbjct: 595 KLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGH 654
Query: 402 AN------AGLFHK--VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
A FH + RL + S Y+A+I K +E +++ M+
Sbjct: 655 CKARSMKEAQYFHNEMIEKGFRLTA--------SSYSALIRLLNKKKKFVEARKLFHDMR 706
Query: 454 EKH--CRPDSETFSI 466
++ PD F I
Sbjct: 707 KEGFTAEPDVYNFYI 721
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 137/333 (41%), Gaps = 2/333 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P Y ++ LL G+ A V +MV + +YT +L+ +C + A
Sbjct: 326 EPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARR 385
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
++M+ D TY+TLI A + E + Q+M R + + VT +++ GY
Sbjct: 386 WFDEMQR-KGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGY 444
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G + +V + M++ P+V T + +G V + N G++
Sbjct: 445 CKRGKMAEAFQVHNTMVQRGV-APNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELN 503
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+N LI K D+ M M TY +I+A G+ +
Sbjct: 504 ACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQ 563
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
+M G+K T+ L+NG+ +G + + I N + YN+++ +
Sbjct: 564 EMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGN 623
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
++ +YK M ++ P+ T++I+ + + K
Sbjct: 624 NMKSTTEIYKGMCSRNVEPNENTYNILIKGHCK 656
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 128/343 (37%), Gaps = 13/343 (3%)
Query: 155 GKSGQPELARKVFNEM-VEEGIEPTPEL-------YTALLAAYCRNSLIDEAFVTLNQMK 206
G S PE V + + ++E IE L Y LL C +++A ++M
Sbjct: 230 GISPSPEACNAVLSRLPLDEAIELFQGLPDKNVCSYNILLKVLCGAGRVEDARQLFDEMA 289
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
+ PDV TY LI E L DM R V PN V+ G
Sbjct: 290 S----PPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRV 345
Query: 267 DQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
V+ M+ D T+LS F NKG + RW+++ + G+ + T+
Sbjct: 346 SDALTVVEDMVHHKVIL-DEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTT 404
Query: 327 LIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
LI + + V++ M + TY +++ + G M G
Sbjct: 405 LINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRG 464
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+ + T+ L +G G + S + N YN++I+ KA L +
Sbjct: 465 VAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAM 524
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
R M +PD T++ + +A K G D+ + L QE L
Sbjct: 525 RTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLD 567
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 138/328 (42%), Gaps = 59/328 (17%)
Query: 151 LVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPN 210
L+LL P L R + + GI P+PE A+L+ +DEA + + LP+
Sbjct: 212 LLLLCLPSAPLLRR-----VRQYGISPSPEACNAVLSRL----PLDEA---IELFQGLPD 259
Query: 211 CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
+V +Y+ L+K A R E L+ DE + P+ VT I++ GY G +
Sbjct: 260 --KNVCSYNILLKVLCGAGRVEDARQLF---DEMASPPDVVTYGILIHGYCALGELENAV 314
Query: 271 RVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA 330
++L M+ +P+ +++++ +KG+V
Sbjct: 315 KLLDDMVARGV-EPNATVYTSVVALLCDKGRVS--------------------------- 346
Query: 331 YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKAD 390
D ++ V+E M + + Y V+ F + GD F++M +G+ D
Sbjct: 347 -------DALT-VVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATD 398
Query: 391 TKTFCCLINGYANAGLF---HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
T+ LING AG KV+ + LA +L + E Y ++ K + E +
Sbjct: 399 GVTYTTLINGLCRAGELKEAEKVLQEM-LARRLDVDEVT--YTVLVDGYCKRGKMAEAFQ 455
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEG 475
V+ M ++ P+ T++ +++ K+G
Sbjct: 456 VHNTMVQRGVAPNVVTYTALSDGLCKQG 483
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 147/328 (44%), Gaps = 10/328 (3%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L K+ + A + EMV G P YT L+ +C++ D+A
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 202 LNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
Q+ +PDV TYS LI C + E I+ + + S PNTVT N ++ G+
Sbjct: 112 FEQL-VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ G D+ +L M E+ + PDV T T+++ F ++D + G+ P
Sbjct: 171 CRMGKMDEAMNLLERMAETGS-SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPN 229
Query: 321 TRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM-EYT 378
TF L+ G + R+ D + + E RK P T TYN +++ + + + ++
Sbjct: 230 VVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSP-TVYTYNTILDGYCRVNQLEEARKFM 288
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
E+M + +F +I G + + V A + + +V Y VI +
Sbjct: 289 LEEMDC---PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCR 345
Query: 439 ADDLMEMERVYKRM-KEKHCRPDSETFS 465
+ E RVY++M +E C P+S T+S
Sbjct: 346 EKKVDEACRVYRKMLEEPGCLPNSITYS 373
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/354 (19%), Positives = 149/354 (42%), Gaps = 25/354 (7%)
Query: 155 GKSGQPEL---------------ARKVFNEMVEEGIE-PTPELYTALLAAYCRNSLIDEA 198
G+ GQP+ R+ V++ E PT Y +L++ C+ EA
Sbjct: 14 GRDGQPKRCHVHGSHRRALQRWPGRRGCGAAVQDAEEVPTAVTYNSLISGLCKAERASEA 73
Query: 199 FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
+ L +M C PD++TY+TLI + + + +++ + R P+ VT + ++
Sbjct: 74 YDLLEEM-VYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLID 132
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
G K G + + M++S +C P+ T N+++S F G++D E+ G
Sbjct: 133 GLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSS 192
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF---SDMGDAKHM 375
P+ T+ L+ + K D ++ M + T+ ++++ + + DA H+
Sbjct: 193 PDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHI 252
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
+M + T+ +++GY + + + ++ NV +N +I
Sbjct: 253 ---LGEMRRKSCSPTVYTYNTILDGYCRVNQLEE--ARKFMLEEMDCPPNVVSFNIMIRG 307
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
K + E + + + + C PD ++ + + +E D+ + ++ L+
Sbjct: 308 LCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLE 361
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 5/151 (3%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF-V 200
P T+ L+ L + + A + EM + PT Y +L YCR + ++EA
Sbjct: 228 PNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKF 287
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L +M +C P+V +++ +I+ R L ++ R P+ V V+
Sbjct: 288 MLEEM----DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVL 343
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNT 291
+ D+ RV MLE C P+ T +T
Sbjct: 344 CREKKVDEACRVYRKMLEEPGCLPNSITYST 374
>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
Length = 795
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 147/356 (41%), Gaps = 8/356 (2%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
KQW A+ +F+++ + P TY L+ L K + A ++++M E G++P+
Sbjct: 378 KQWEDAIALFDLVVDTGV--PDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVT 435
Query: 182 YTALLAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
+LL YC +DEA ++M K P P+ TY+TL+K + F+ L
Sbjct: 436 CHSLLLGYCEKGCMDEALKLYSEMPGKGFP---PNEVTYTTLMKGYIKKKAFDKAYALLN 492
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
+M + V+ T NI++ G +++ +L + P T N+I++ F
Sbjct: 493 EMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFV-PTTMTYNSIINGFVKA 551
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
G + Y + GI P T+ I Y + D ++ YMR + Y
Sbjct: 552 GMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAY 611
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
N I F G+ H + + +G+ + + + GY N + + K
Sbjct: 612 NAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIK 671
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+IA + Y +I K ++ +Y M H PD +TF+ +T + G
Sbjct: 672 QRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALTHGLCRSG 727
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 153/375 (40%), Gaps = 36/375 (9%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ +++ +KE +P T LL+ + G + A K+++EM +G P YT L
Sbjct: 416 EAVNLWDKMKEAGV-KPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTL 474
Query: 186 LAAYCRNSLIDEAFVTLNQM------------KTLPN--------CQ------------- 212
+ Y + D+A+ LN+M L N C+
Sbjct: 475 MKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGF 534
Query: 213 -PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
P TY+++I V A +Y+ M E+ +TPN VT + GY + D +
Sbjct: 535 VPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVK 594
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+L M + PD+ N +++F +G + + G+ P +N + Y
Sbjct: 595 LLIYMRCNGI-HPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGY 653
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
+M + S M K + + Y +I+ FS +G+ + +M A D
Sbjct: 654 KNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDD 713
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
KTF L +G +G + ++L + N YN +I+A I+ L E +++ +
Sbjct: 714 KTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDK 773
Query: 452 MKEKHCRPDSETFSI 466
M PD T++I
Sbjct: 774 MLSSGVVPDDTTYNI 788
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 140/332 (42%), Gaps = 10/332 (3%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
T M+ L G+ G+ A +F+E V +G+ PT YT L+ + DE + QM
Sbjct: 299 TLMQGYCLHGEIGK---ALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQM 355
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
P Y ++ +IK + ++E L+ D+ + P+ T ++ K
Sbjct: 356 IE-QGLLPSTYEFNLVIKGLLRNKQWEDAIALF-DLVVDTGVPDVFTYGCLIHWLSKHHK 413
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+ + M E+ KP + T +++L + KG +D + Y + G P T+
Sbjct: 414 VHEAVNLWDKMKEAGV-KPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYT 472
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
L+ Y KK+ +DK +++ M + TYN +I + ++ ++ +E
Sbjct: 473 TLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSE 532
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD--DLM 443
G T T+ +ING+ AG+ ++ R + I N+ Y + I + + DL
Sbjct: 533 GFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLA 592
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+Y R H PD ++ + K+G
Sbjct: 593 VKLLIYMRCNGIH--PDIAAYNAFINMFCKQG 622
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 154/355 (43%), Gaps = 7/355 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMV-EEGIEPTPELYTA 184
+A+QV ++E +P++ TY ++ +L K G+ + A ++ ++M+ G + L T
Sbjct: 241 RAVQVLGKMREAGL-KPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATT 299
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC-VDAMRFELIETLYQDMDE 243
L+ YC + I +A ++ P TY+ LIK C + M E + L + M E
Sbjct: 300 LMQGYCLHGEIGKALDLFDE-AVRDGVTPTNVTYTVLIKGCDAEGMTDETYK-LCRQMIE 357
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+ + P+T N+V+ G + ++ + ++++ PDV+T ++ + +V
Sbjct: 358 QGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGV--PDVFTYGCLIHWLSKHHKVH 415
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
++K + G+ P T + L+ Y +K D+ + M FP TY ++
Sbjct: 416 EAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLM 475
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
+ + +MH G+ T+ LING +V ++
Sbjct: 476 KGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFV 535
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
YN++I+ +KA + +Y++M EK P+ T++ + Y + D
Sbjct: 536 PTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCD 590
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 149/365 (40%), Gaps = 11/365 (3%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P + LLV + A +F+EM +G ++Y ++ A + +A
Sbjct: 151 PDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVVGRMHGDAVRL 210
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
++M +PD Y+ I + + M E + P T N V+
Sbjct: 211 FDEMAG-AGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTYNSVVDVLV 269
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G D+ R+ ML + K DV+ T++ + G++ +++ G+ P
Sbjct: 270 KVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEAVRDGVTPTN 329
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+ +LI + M D+ + M + ++ +N VI+ + F+
Sbjct: 330 VTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDL 389
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA----ENVSFYNAVISACI 437
+ G+ D T+ CLI+ + HKV +V L K++ A V+ ++ ++ C
Sbjct: 390 VVDTGVP-DVFTYGCLIHWLSK---HHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCE 445
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
K + E ++Y M K P+ T++ + + Y K+ DK YAL E Q + + G
Sbjct: 446 KG-CMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGV-SCGE 503
Query: 498 WQQNI 502
+ NI
Sbjct: 504 YTYNI 508
>gi|297835316|ref|XP_002885540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331380|gb|EFH61799.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 841
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 165/364 (45%), Gaps = 17/364 (4%)
Query: 119 VLKKQ--WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIE 176
+LK+Q W +A+++FE K + Y+ Y +L +LGK+ + + +++EM+ +GI+
Sbjct: 159 ILKEQTRWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIK 218
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
P Y L+ Y + L A L +M + QPD T +++ A F+ E
Sbjct: 219 PINSTYGTLIDVYSKGGLKVHALCWLGKMSKI-GMQPDEVTTGIVLQMYKKAREFQKAEE 277
Query: 237 LY------QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMN 290
+ ++ + V ++ T N ++ YGK+G + MLE P T N
Sbjct: 278 FFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIV-PTTVTFN 336
Query: 291 TILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
T++ V+ N GQ + + + F P+TRT+NILI + K ++ + + M+
Sbjct: 337 TMIHVYGNNGQFGEVTSLMKTMK-FHCAPDTRTYNILISLHTKNNDIERAGTYFKEMKGA 395
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
+Y ++ AFS K E +M ++ D T L Y A + K
Sbjct: 396 GLKPDPVSYRTLLYAFSIRHMVKEAEELIAEMDDNDVEIDEYTQSALTRMYIEAEMLEKS 455
Query: 411 ISSVRLASKLQIAENVSF--YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
S + + +A N+S Y+A I A + L E ERV+ +E + R E +++M
Sbjct: 456 WSWFK---RFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVLE-YNVMI 511
Query: 469 EAYA 472
+AY
Sbjct: 512 KAYG 515
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 155/362 (42%), Gaps = 14/362 (3%)
Query: 129 QVFEMLKEQPFY-QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
+V ++K F+ P TY L+ L K+ E A F EM G++P P Y LL
Sbjct: 350 EVTSLMKTMKFHCAPDTRTYNILISLHTKNNDIERAGTYFKEMKGAGLKPDPVSYRTLLY 409
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVT 247
A+ ++ EA + +M + + D YT S L + ++A E++E + V
Sbjct: 410 AFSIRHMVKEAEELIAEMDD-NDVEIDEYTQSALTRMYIEA---EMLEKSWSWFKRFHVA 465
Query: 248 PNTVTQNIV--LGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
N ++ + YG+ G + ERV E K V N ++ + +
Sbjct: 466 GNMSSEGYSANIDAYGERGYLSEAERVFICCQEVN--KRTVLEYNVMIKAYGISKSCEKA 523
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+E ++G+ P+ T+N L+ M DK +E MR+ + Y VI +
Sbjct: 524 CELFESMMSYGVTPDKCTYNTLVQILASADMPDKAKCYLEKMRETGYVSDCIPYCAVISS 583
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
F +G E +++M ++ D + LIN +A+ G + +S V + I EN
Sbjct: 584 FVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPEN 643
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCR----PDSETFSIMTEAYAKEGMNDKVY 481
YN++I K L E E +Y+++ + C PD T + M Y++ M K
Sbjct: 644 SVIYNSLIKLYTKVGYLDEAEAIYRKLL-RSCNETQYPDVYTSNCMINLYSQRSMVRKAE 702
Query: 482 AL 483
A+
Sbjct: 703 AI 704
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 149/324 (45%), Gaps = 5/324 (1%)
Query: 120 LKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTP 179
+ K +A ++FE + P + TY L+ +L + P+ A+ +M E G
Sbjct: 516 ISKSCEKACELFESMMSYGV-TPDKCTYNTLVQILASADMPDKAKCYLEKMRETGYVSDC 574
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
Y A+++++ + ++ A +M N +PDV Y LI A D + + +
Sbjct: 575 IPYCAVISSFVKLGQLNMAEEVYKEMVEY-NIEPDVVVYGVLINAFADTGNVQQAMSYVE 633
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA--TCKPDVWTMNTILSVFA 297
M E + N+V N ++ Y K G D+ E + +L S T PDV+T N ++++++
Sbjct: 634 AMKEAGIPENSVIYNSLIKLYTKVGYLDEAEAIYRKLLRSCNETQYPDVYTSNCMINLYS 693
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+ V E +E + + TF +++ Y K +++ + + + MR+++
Sbjct: 694 QRSMVRKAEAIFESMKQRR-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMRILTDPL 752
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
+YN+V+ ++ G K TF++M + G++ D TF L G+ K + +
Sbjct: 753 SYNSVLGLYALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILIKLGMSKKAVRKIEEI 812
Query: 418 SKLQIAENVSFYNAVISACIKADD 441
K +I + + + +S+ + +D
Sbjct: 813 RKKEIKRGLELWISTLSSLVGIED 836
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 134/342 (39%), Gaps = 46/342 (13%)
Query: 178 TPELYTALLAAYCRNSLIDEA---FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELI 234
+ E Y+A + AY + EA F+ ++ + V Y+ +IKA + E
Sbjct: 469 SSEGYSANIDAYGERGYLSEAERVFICCQEVN-----KRTVLEYNVMIKAYGISKSCEKA 523
Query: 235 ETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILS 294
L++ M VTP+ T N ++ A M D+ + L M E+ D ++S
Sbjct: 524 CELFESMMSYGVTPDKCTYNTLVQILASADMPDKAKCYLEKMRETGYV-SDCIPYCAVIS 582
Query: 295 VFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 354
F GQ++M E Y++ + I+P+ + +LI A+ + S +E M++ P
Sbjct: 583 SFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPE 642
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHA---EGMKADTKTFCCLINGYANAGLFHK-- 409
S YN++I+ ++ +G E + ++ E D T C+IN Y+ + K
Sbjct: 643 NSVIYNSLIKLYTKVGYLDEAEAIYRKLLRSCNETQYPDVYTSNCMINLYSQRSMVRKAE 702
Query: 410 -VISSV----------------------RLASKLQIAENVS---------FYNAVISACI 437
+ S+ R QIA+ + YN+V+
Sbjct: 703 AIFESMKQRREANEFTFAMMLCMYKKNGRFEEATQIAKQMREMRILTDPLSYNSVLGLYA 762
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
E +K M +PD TF + K GM+ K
Sbjct: 763 LDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILIKLGMSKK 804
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 12/169 (7%)
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
+NI++ GK + + S+ + M + +STY +I+ +S G H +M
Sbjct: 189 YNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMS 248
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVS---------FYNAVIS 434
GM+ D T ++ Y A F K + K EN + YN +I
Sbjct: 249 KIGMQPDEVTTGIVLQMYKKAREFQK---AEEFFKKWSCDENKADSHVCLSSYTYNTMID 305
Query: 435 ACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
K+ + E +KRM E+ P + TF+ M Y G +V +L
Sbjct: 306 TYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHVYGNNGQFGEVTSL 354
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 151/347 (43%), Gaps = 8/347 (2%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ L G + A + EM EGI PT Y A++ ++ ++ A V +M
Sbjct: 310 TYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEM 369
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ + QPDV TY++L+ A + L+ D+ + P +T NI++ GY + G
Sbjct: 370 RAM-GLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGD 428
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
++ R+ M+E C PDV T ++ N + M ++++ + G+ P+ +N
Sbjct: 429 LEEARRLKEEMVEQG-CLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYN 487
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG---DAKHMEYTFEQM 382
I A K + E M + TYN +I+ G DAK ++ +M
Sbjct: 488 TRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQM---KM 544
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
G++ D T+ CLI+ + GL + + +A + Y I A + +L
Sbjct: 545 VHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNL 604
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+++M E+ P+ T++++ A + G Y E L+
Sbjct: 605 YSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLE 651
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 139/357 (38%), Gaps = 2/357 (0%)
Query: 119 VLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPT 178
+L K + + ++ E P TY ++ L +SGQ E A+ F EM G++P
Sbjct: 318 LLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPD 377
Query: 179 PELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
Y +LL YC+ + EA + ++ P V TY+ LI E L
Sbjct: 378 VITYNSLLNGYCKAGSLKEALLLFGDLRH-AGLAPTVLTYNILIDGYCRLGDLEEARRLK 436
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
++M E+ P+ T I++ G A ML S +PD + NT +
Sbjct: 437 EEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEML-SKGLQPDCFAYNTRIRAELT 495
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
G + R E GI +T T+NILI K + + M T
Sbjct: 496 LGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCIT 555
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
Y +I A + G + F+ M ++G+ T+ I+ Y G + R
Sbjct: 556 YTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKML 615
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + N YN +I A + R + M E+ P+ T++++ + KEG
Sbjct: 616 EEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEG 672
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 2/156 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP TY L+ + G ARK F +M+ +G+ P+ YT + AYCR + A+
Sbjct: 550 QPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYG 609
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M +P+ TY+ LI A R +L + +M ER + PN T +++ G
Sbjct: 610 WFRKMLE-EGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGN 668
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
K G ++ R M ++ PD T + F
Sbjct: 669 CKEGNWEDAMRFYFEMHQNGI-HPDYLTHKALFKGF 703
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 3/194 (1%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
PDV N +L V ++ + D + + + GI+P T+N L+ ++ K+ DK++ +
Sbjct: 200 PDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAML 259
Query: 344 MEYM--RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
++ M R T+N VI + GD + E M KA + T+ LI G
Sbjct: 260 LKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLS-KKASSFTYNPLITGL 318
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
G K I V YNA+I +++ + + + M+ +PD
Sbjct: 319 LAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDV 378
Query: 462 ETFSIMTEAYAKEG 475
T++ + Y K G
Sbjct: 379 ITYNSLLNGYCKAG 392
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
WF+ +ML+E +P E TY L+ L ++G+ +LA + F+EM+E G+ P YT
Sbjct: 610 WFR-----KMLEEG--VEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYT 662
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
L+ C+ ++A +M PD T+ L K
Sbjct: 663 LLIDGNCKEGNWEDAMRFYFEMHQ-NGIHPDYLTHKALFKG 702
>gi|115482710|ref|NP_001064948.1| Os10g0495100 [Oryza sativa Japonica Group]
gi|22128714|gb|AAM92826.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
gi|31432837|gb|AAP54424.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639557|dbj|BAF26862.1| Os10g0495100 [Oryza sativa Japonica Group]
gi|125575261|gb|EAZ16545.1| hypothetical protein OsJ_32018 [Oryza sativa Japonica Group]
Length = 461
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 131/284 (46%), Gaps = 11/284 (3%)
Query: 126 QALQVFEMLKEQPFYQPKEGT-YMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+AL++ +M+ + P + Y ++ K G P+ A ++EM ++GI P Y++
Sbjct: 173 EALELLQMMPDDGGDCPPDVVLYNTVINGFFKEGDPDKAYATYHEMFDQGILPDVVTYSS 232
Query: 185 LLAAYCRNSLIDEAFVTLNQM---KTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQD 240
++AA C+ +D+A LN M +PNC+ TY++++ C E I L +
Sbjct: 233 IIAALCKAQAMDKAMEVLNTMVKNGVMPNCR----TYNSIVHGYCSSGQLTEAIGFL-KM 287
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M V P+ VT N+++ K + ++ + M + KPD+ T T+L +A KG
Sbjct: 288 MCSDGVEPDVVTCNLLMDYLCKNRRCTEARKIFNSMTKCGL-KPDITTYCTLLQGYATKG 346
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+ M + GI P FNILI AY K+ D+ V MR+ + Y
Sbjct: 347 ALVEMHDLLDLMVWNGIQPNHHVFNILICAYAKQEKVDEAMLVFSKMRQQGLSPNAVNYR 406
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
VI+ +G T +QM EG+ D + LI+G+
Sbjct: 407 TVIDVLCKLGRVYDAVLTLKQMINEGLTPDIIVYTPLIHGFCTC 450
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 145/367 (39%), Gaps = 42/367 (11%)
Query: 160 PELARKVFNEMVEEGI-EPTPELYT--ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
P A +N M G E TP LYT L+ CR +D F L + + +
Sbjct: 62 PAAAVSRYNRMARAGADEVTPNLYTYSVLIGCCCRAGRLDLGFAALGNVIK-KGFRVEAI 120
Query: 217 TYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
T++ L+K C D + ++ + M + PN + I+L G + +L
Sbjct: 121 TFTPLLKGLCADKRTSDAMDIVLCRMTQLGCIPNVFSCTILLKGLCDENRSQEALELLQM 180
Query: 276 MLE-SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
M + C PDV NT+++ F +G D Y + + GI P+ T++ +I A K
Sbjct: 181 MPDDGGDCPPDVVLYNTVINGFFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKA 240
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKH-------------------- 374
+ DK V+ M K TYN+++ + G
Sbjct: 241 QAMDKAMEVLNTMVKNGVMPNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTC 300
Query: 375 ---MEY------------TFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
M+Y F M G+K D T+C L+ GYA G ++ + L
Sbjct: 301 NLLMDYLCKNRRCTEARKIFNSMTKCGLKPDITTYCTLLQGYATKGALVEMHDLLDLMVW 360
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MND 478
I N +N +I A K + + E V+ +M+++ P++ + + + K G + D
Sbjct: 361 NGIQPNHHVFNILICAYAKQEKVDEAMLVFSKMRQQGLSPNAVNYRTVIDVLCKLGRVYD 420
Query: 479 KVYALEQ 485
V L+Q
Sbjct: 421 AVLTLKQ 427
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 156/361 (43%), Gaps = 7/361 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLG--KSGQPELARKVFNEMVEEGIEPTPELYT 183
QA++ E L+ + Y+ +++ G K G P+ A K+F M ++P Y
Sbjct: 77 QAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYN 136
Query: 184 ALLAAYCRNSLIDEAFVTLNQM-KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
+++ C++ +++A L +M + PD+ TY+TLI A A R + M
Sbjct: 137 TVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMK 196
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
+ P+ +T NI++ G K G ++ +L GM + A PDV T N+I+ G+V
Sbjct: 197 AAGINPDVLTCNILVSGICKDGDVEEALEILDGM-KLAGPVPDVITYNSIIHALCVAGKV 255
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
E + P+ TFN L+ + K M + V+E M + TY +
Sbjct: 256 ---VEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTIL 312
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
+ +G + Y E++ +G D + L++G +G + V+ S
Sbjct: 313 VNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGC 372
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
V Y++++S +A ++ + + M + P T++I+ K+G K +
Sbjct: 373 RTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVS 432
Query: 483 L 483
L
Sbjct: 433 L 433
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 159/364 (43%), Gaps = 11/364 (3%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A+Q F+ EQ Y+ +Y LL +L KSG KV+ +++ G P + L+
Sbjct: 10 AIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILI 69
Query: 187 AAYCRNSLIDEAFVTLNQMKTLP--NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
C+ +A L ++ L + PDVY ++ LI + L+++M+
Sbjct: 70 RGNCKAG---QAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESS 126
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML-ESATCKPDVWTMNTILSVFANKGQVD 303
V P VT N V+ G K+G ++ +L M+ + PD+ T NT+++ F ++
Sbjct: 127 RVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIR 186
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS-TYNNV 362
+ EK + GI+P+ T NIL+ K ++ +++ M KL P TYN++
Sbjct: 187 EACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGM-KLAGPVPDVITYNSI 245
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I A G + M D TF L++G+ AG+ + + + + I
Sbjct: 246 IHALCVAGKVVEAAEILKTMSC---SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENI 302
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
+V Y +++ + + + + + + PD ++ + + K G ++ +
Sbjct: 303 LPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHK 362
Query: 483 LEQE 486
L +E
Sbjct: 363 LVKE 366
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 150/351 (42%), Gaps = 10/351 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL--YT 183
QA+++FE + E +P+ TY ++ L KSG E AR++ EM+ +G + P++ Y
Sbjct: 115 QAVKLFENM-ESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYN 173
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMD 242
L+ A+ R S I EA +MK PDV T + L+ C D E +E L M
Sbjct: 174 TLINAFYRASRIREACAFREKMKA-AGINPDVLTCNILVSGICKDGDVEEALEIL-DGMK 231
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
P+ +T N ++ AG + +L M +C PD+ T NT+L F G +
Sbjct: 232 LAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM----SCSPDLVTFNTLLDGFCKAGML 287
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
E+ I P+ T+ IL+ + ++E + + + Y ++
Sbjct: 288 PRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSL 347
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
++ G+ + ++M G + + L++GY AG HK + + +
Sbjct: 348 VDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINM 407
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ YN V+ IK + + + + + PD T++ + + K
Sbjct: 408 VPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCK 458
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 101/304 (33%), Gaps = 72/304 (23%)
Query: 126 QALQVFEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
Q F +L+E + Y P Y L+ L KSG+ E A K+ EM G +Y+
Sbjct: 321 QVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYS 380
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQP------------------------------ 213
+L++ YCR + +A L +M ++ P
Sbjct: 381 SLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVAR 440
Query: 214 ----DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
DV TY+TLI A R L +M R PN VT V+ G + G D
Sbjct: 441 GYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVD-- 498
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
D W++ V+M + + P + LI
Sbjct: 499 ---------------DAWSL-----------VVEMSRKRHA--------PNVVVYTSLID 524
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
K D V++ MR Y +I + S G +++M A G
Sbjct: 525 GLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLP 584
Query: 390 DTKT 393
D T
Sbjct: 585 DGST 588
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/132 (18%), Positives = 58/132 (43%)
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
+YN++++ G ++ + G + TF LI G AG + + +R
Sbjct: 29 SYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRAL 88
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
+ +A +V +N +I K + + ++++ M+ +P+ T++ + K G
Sbjct: 89 DEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNL 148
Query: 478 DKVYALEQEKLQ 489
+K L +E ++
Sbjct: 149 EKARELLEEMIR 160
>gi|326490553|dbj|BAJ84940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 856
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 163/389 (41%), Gaps = 48/389 (12%)
Query: 108 VNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
N V + DH + AL F LK QP ++ TY ++ +LG++ Q RK+
Sbjct: 333 ANQVLKLLHDHNI------ALGFFHWLKRQPGFKHDGHTYTTMIGILGQAKQFGTMRKLL 386
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
+EM +PT Y ++ AY R + + EA +M+ QPD TY TLI
Sbjct: 387 DEMSSVNCKPTVVTYNRIIHAYGRANYLREAVKVFEEMEGA-GYQPDRVTYCTLIDIHAK 445
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
+ E+ LY M E ++P+T T + ++ GK G ++ M+++ C P++
Sbjct: 446 SGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIDNG-CTPNLV 504
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T N I+++ A D + + Y + G P+ T++I++ G D+ +V M
Sbjct: 505 TYNIIIALQAKARNYDNVVKLYRDMQIAGFRPDKITYSIVMEVLGHCGHLDEAEAVFLEM 564
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
R+ P D + L++ + AG
Sbjct: 565 RRDWAP------------------------------------DEPVYGLLVDLWGKAGNV 588
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
K + + + NV N+++SA +K + + V + M + P +T++++
Sbjct: 589 DKALGWYHAMLQDGLQPNVPTCNSLLSAFLKLNRFQDAYGVLQNMLAQGLVPSLQTYTLL 648
Query: 468 ----TEAYAKEGMNDKVYALEQEKLQMLL 492
T+A+A+ G+ ++ A+ M L
Sbjct: 649 LSCCTDAHAQMGLCCQLMAITGHPAHMFL 677
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 6/217 (2%)
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
E VL G+ CK D + N +L + + W + R G + T+ +IG
Sbjct: 318 EHVLDGL----RCKIDAFQANQVLKLLHDHNIALGFFHWLK--RQPGFKHDGHTYTTMIG 371
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
G+ + + M +++ M + T TYN +I A+ + FE+M G +
Sbjct: 372 ILGQAKQFGTMRKLLDEMSSVNCKPTVVTYNRIIHAYGRANYLREAVKVFEEMEGAGYQP 431
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
D T+C LI+ +A +G + ++ ++ + Y+A+++ K L +++
Sbjct: 432 DRVTYCTLIDIHAKSGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLF 491
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
M + C P+ T++I+ AK D V L ++
Sbjct: 492 CEMIDNGCTPNLVTYNIIIALQAKARNYDNVVKLYRD 528
>gi|30688764|ref|NP_850356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75158748|sp|Q8RWS8.1|PP199_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g41720; AltName: Full=Protein EMBRYO DEFECTIVE 2654
gi|20268762|gb|AAM14084.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|21436141|gb|AAM51317.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330254931|gb|AEC10025.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 159/353 (45%), Gaps = 7/353 (1%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
+Q+ +AL FE++K +P T+ ++ L K GQ A +FN M E+ E P++
Sbjct: 262 RQYSKALSYFELMKGAKV-RPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDV 320
Query: 182 --YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLY 238
+T+++ Y I+ M +P++ +Y+ L+ A V M + L
Sbjct: 321 VTFTSIMHLYSVKGEIENCRAVFEAM-VAEGLKPNIVSYNALMGAYAVHGMSGTALSVL- 378
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
D+ + + P+ V+ +L YG++ + + V M+ KP+V T N ++ + +
Sbjct: 379 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFL-MMRKERRKPNVVTYNALIDAYGS 437
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
G + + + GI P + L+ A + + + +V+ + ++
Sbjct: 438 NGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAA 497
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN+ I ++ + + + ++ M + +KAD+ TF LI+G + + IS ++
Sbjct: 498 YNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 557
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
L I Y++V+ A K + E E ++ +MK C PD ++ M AY
Sbjct: 558 DLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAY 610
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 166/416 (39%), Gaps = 74/416 (17%)
Query: 131 FEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYC 190
FEM K +P TY L+ G++GQ A + ++M+ I P+ Y L+ A
Sbjct: 167 FEMQKWS--CKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACG 224
Query: 191 RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT 250
+ EA +M T PD+ T++ ++ A ++ + ++ M V P+T
Sbjct: 225 SSGNWREALEVCKKM-TDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDT 283
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLES-ATCKPDVWTMNTILSVFANKGQVDMMERWY 309
T NI++ K G Q + + M E A C+PDV T +I+ +++ KG+++ +
Sbjct: 284 TTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVF 343
Query: 310 EKFRNFGIDPETRTFNILIGAY-----------------------------------GKK 334
E G+ P ++N L+GAY G+
Sbjct: 344 EAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRS 403
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
R K V MRK + TYN +I+A+ G F QM +G+K + +
Sbjct: 404 RQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSV 463
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
C L+ + + V + + A I N + YN+ I + I A +L + +Y+ M++
Sbjct: 464 CTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRK 523
Query: 455 KHCRPDSETFSIMTE-----------------------------------AYAKEG 475
K + DS TF+I+ AY+K+G
Sbjct: 524 KKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQG 579
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 155/329 (47%), Gaps = 5/329 (1%)
Query: 150 LLVLLGKSGQPELARKVFNEM-VEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
L+ L + G EL VF M +++ ++Y ++ + R++ +D+A +M+
Sbjct: 113 LIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKW 172
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
+C+PD TY LI A A ++ L DM ++ P+ T N ++ G +G + +
Sbjct: 173 -SCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWRE 231
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
V M ++ PD+ T N +LS + + Q ++E + + P+T TFNI+I
Sbjct: 232 ALEVCKKMTDNGV-GPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIII 290
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSS--TYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
K + + MR+ + T+ +++ +S G+ ++ FE M AEG
Sbjct: 291 YCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEG 350
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+K + ++ L+ YA G+ +S + + I +V Y ++++ ++ + +
Sbjct: 351 LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAK 410
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
V+ M+++ +P+ T++ + +AY G
Sbjct: 411 EVFLMMRKERRKPNVVTYNALIDAYGSNG 439
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 160/428 (37%), Gaps = 93/428 (21%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL V +K+ P +Y LL G+S QP A++VF M +E +P Y AL+
Sbjct: 374 ALSVLGDIKQNGII-PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALI 432
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
AY N + EA QM+ +P+V + TL+ AC + + ++T+ R +
Sbjct: 433 DAYGSNGFLAEAVEIFRQMEQ-DGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 491
Query: 247 TPNTVTQNIVLGGYGKAG-------MFDQMER-------VLSGMLESATCK----PDVWT 288
NT N +G Y A ++ M + V +L S +C+ P+ +
Sbjct: 492 NLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAIS 551
Query: 289 M----------------NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
+++L ++ +GQV E + + + G +P+ + ++ AY
Sbjct: 552 YLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYN 611
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
+ K + F +M A G++ D+
Sbjct: 612 ASEKWGKACEL-----------------------------------FLEMEANGIEPDSI 636
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC------IKADDLMEME 446
L+ + G V + L + +I + + + SAC +A DL++M
Sbjct: 637 ACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMM 696
Query: 447 RVY-------KRMKEKHCRPDSETFSIMTEAYAK-----EGMNDKVYALEQEKLQMLLEA 494
Y + H S M + + K G+N K YA+ E L A
Sbjct: 697 DPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLL----A 752
Query: 495 SGHWQQNI 502
G+W++ I
Sbjct: 753 VGNWRKYI 760
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 108/268 (40%), Gaps = 37/268 (13%)
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACV 226
EM + I T E+Y+++L AY + + EA NQMK + C+PDV Y++++ A
Sbjct: 553 LKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMK-MAGCEPDVIAYTSMLHAYN 611
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
+ ++ L+ +M+ + P+++ + ++ + K G + ++ M E K
Sbjct: 612 ASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMRE----KEIP 667
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
+T +F+ + ++ W KR D + + Y
Sbjct: 668 FTGAVFFEIFS---ACNTLQEW-------------------------KRAIDLIQMMDPY 699
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
+ L T N ++ F G + M F ++ A G+ + KT+ L+ G
Sbjct: 700 LPSLSIGLT----NQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGN 755
Query: 407 FHKVISSVRLASKLQIAENVSFYNAVIS 434
+ K I + S I + Y +IS
Sbjct: 756 WRKYIEVLEWMSGAGIQPSNQMYRDIIS 783
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 98/243 (40%), Gaps = 38/243 (15%)
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
L+ +M + S P+ T + ++ +G+AG + ++ ML +A P T N +++
Sbjct: 165 LFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIA-PSRSTYNNLINAC 223
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
+ G +K + G+ P+ T NI++ AY R Y K S E M+ + +
Sbjct: 224 GSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDT 283
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGM--KADTKTFCCLINGYANAGLFHKVISSV 414
+T+N +I S +G + F M + + D TF +++ Y+ G
Sbjct: 284 TTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKG--------- 334
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
++ V++ M + +P+ +++ + AYA
Sbjct: 335 --------------------------EIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVH 368
Query: 475 GMN 477
GM+
Sbjct: 369 GMS 371
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 75/194 (38%), Gaps = 35/194 (18%)
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
N ++ + A VD + + + + P+ T++ LI A+G+ + ++M+ M +
Sbjct: 147 NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLR 206
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
+ STYNN+I A G+ + ++M G+ D T +++ Y + + K
Sbjct: 207 AAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSK 266
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+S L MK RPD+ TF+I+
Sbjct: 267 ALSYFEL-----------------------------------MKGAKVRPDTTTFNIIIY 291
Query: 470 AYAKEGMNDKVYAL 483
+K G + + L
Sbjct: 292 CLSKLGQSSQALDL 305
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 161/394 (40%), Gaps = 49/394 (12%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP T+ LL L +S Q E ARK+ M E G P +Y AL++ Y + +AF
Sbjct: 39 QPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFK 98
Query: 201 TLNQM---KTLP-------------------------------NCQPDVYTYSTLIKACV 226
L +M LP C P++YTY+ +++
Sbjct: 99 FLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLC 158
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
+ + + + + ++M R P+ VT N + G K D+ + L+ M + PDV
Sbjct: 159 EERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT----PDV 214
Query: 287 WTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEY 346
+ T+++ G +D R + N G P+ T++ LI + K ++ +++
Sbjct: 215 VSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDS 274
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA-- 404
M KL YN+++ A +G E +M G D ++ I+G A
Sbjct: 275 MLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAER 334
Query: 405 -----GLFHKVI---SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY-KRMKEK 455
+F +++ + +S + ++ Y ++ K E ++ K + EK
Sbjct: 335 VKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEK 394
Query: 456 HCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
C PD +++M +++ K DK + ++ L+
Sbjct: 395 ICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLE 428
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 147/348 (42%), Gaps = 19/348 (5%)
Query: 122 KQWFQALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
K + QA + EM+K P TY ++ L K+ + A K+ +EM ++G P
Sbjct: 91 KDFGQAFKFLAEMVKNHCL--PTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIY 148
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
Y ++ C +DEA L +M + PDV TY++ IK R +
Sbjct: 149 TYNVIVEGLCEERKLDEAKKMLEEM-AVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLAR 207
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M VTP+ V+ V+ G K+G D R+L M + C PDV T ++++ F G
Sbjct: 208 M---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHM-SNRGCTPDVVTYSSLIDGFCKGG 263
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+V+ + G P +N L+GA + K ++ M + F +YN
Sbjct: 264 EVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYN 323
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEG----------MKADTKTFCCLINGYANAGLFHKV 410
I+ K + F++M G + D + L++G G F +
Sbjct: 324 ACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEA 383
Query: 411 ISSVRLASKLQIAE-NVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
+ +I E +V FYN ++ + K + + +++K+M EK+C
Sbjct: 384 CALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC 431
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 137/361 (37%), Gaps = 69/361 (19%)
Query: 174 GIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFEL 233
G E Y LL R D+A +M +CQPD +T++ L++ + + E
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMID-KSCQPDAFTFAILLRGLCRSNQLEK 60
Query: 234 IETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
L M E P+ N ++ GY KA F Q + L+ M+++ C P V T I+
Sbjct: 61 ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNH-CLPTVVTYTNIV 119
Query: 294 SVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM------ 347
+ + ++ R+ G P T+N+++ ++R D+ ++E M
Sbjct: 120 DGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYF 179
Query: 348 ----------------------RKL--QFPWTSS--TYNNVIEAFSDMGDAKHMEYTFEQ 381
RK + P T +Y VI GD +
Sbjct: 180 PDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDH 239
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA------ 435
M G D T+ LI+G+ G + + + KL N+ YN+++ A
Sbjct: 240 MSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGH 299
Query: 436 CIKADD-LMEMER----------------------------VYKRMKEKHCRPDSETFSI 466
KA+D L+EMER V+ RM E+ C P++ ++S+
Sbjct: 300 IGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSM 359
Query: 467 M 467
+
Sbjct: 360 L 360
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 145/340 (42%), Gaps = 20/340 (5%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P +Y ++ L KSG + A ++ + M G P Y++L+ +C+ ++ A
Sbjct: 212 PDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGL 271
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L+ M L C+P++ Y++L+ A E + +M+ R TP+ V+ N + G
Sbjct: 272 LDSMLKL-GCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLC 330
Query: 262 KAGMFDQMERVLSGMLESATCKP----------DVWTMNTILSVFANKGQVDMMERWYEK 311
KA + + V M+E C P D+ +L G+ D + K
Sbjct: 331 KAERVKKAKAVFDRMVERG-CTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSK 389
Query: 312 FRNFGI-DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS--- 367
+ I +P+ +N+++ ++ K+R DK + + M + + T+N ++
Sbjct: 390 VLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLE-KNCCNVVTWNILVHGLCVDD 448
Query: 368 DMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVS 427
+ DA+ M T M EG D T+ L++ G + A K +V
Sbjct: 449 RLSDAETMLLT---MVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVV 505
Query: 428 FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
Y+A+I+ + + E ++ ++ E+ PD +T ++
Sbjct: 506 TYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLL 545
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/274 (18%), Positives = 104/274 (37%), Gaps = 33/274 (12%)
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW 308
N T N +L + D+ V M++ +C+PD +T +L Q++ +
Sbjct: 6 NVFTYNKLLLQLTREHRHDKASAVFQEMIDK-SCQPDAFTFAILLRGLCRSNQLEKARKL 64
Query: 309 YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD 368
+ + G P+ +N LI Y K + + + + M K T TY N+++
Sbjct: 65 LGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCK 124
Query: 369 MGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY----------------ANAGLFHKVIS 412
+ ++M +G + T+ ++ G A G F V++
Sbjct: 125 AERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVT 184
Query: 413 ----------------SVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH 456
+ + +++ + +V Y VI+ K+ DL R+ M +
Sbjct: 185 YNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRG 244
Query: 457 CRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
C PD T+S + + + K G ++ L L++
Sbjct: 245 CTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKL 278
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 105/300 (35%), Gaps = 27/300 (9%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P Y LL L + G A + EM G P Y A + C+ + +A
Sbjct: 281 RPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKA 340
Query: 201 TLNQMKTLPNCQP----------DVYTYSTLIKACVDAMRFELIETLYQD-MDERSVTPN 249
++M C P D+ Y+ L+ RF+ L+ +DE+ P+
Sbjct: 341 VFDRMVE-RGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPD 399
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
N++L + K D+ ++ MLE C W N ++ ++ E
Sbjct: 400 VFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCCNVVTW--NILVHGLCVDDRLSDAETML 457
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
+ G P+ T+ L+ A K + E K TY+ +I
Sbjct: 458 LTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHE 517
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFY 429
A+ F ++ D KT GL H+ ++L +K + AE V Y
Sbjct: 518 NMAEEAYLLFTKLVERRWVPDDKTL----------GLLHR---KLKLLNKPRKAEVVDLY 564
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/171 (19%), Positives = 69/171 (40%)
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G + T+N L+ ++ +DK S+V + M + T+ ++ +
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISA 435
+M G D + LI+GY+ A F + + K V Y ++
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
KA+ + ++ M++K C P+ T++++ E +E D+ + +E
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEE 172
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 159/365 (43%), Gaps = 22/365 (6%)
Query: 116 SDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
SD+V +F+ K P TY L+ L K+ + A+++ + M+ G
Sbjct: 423 SDNVGSDFYFEG-------KHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGC 475
Query: 176 EPTPELYTALLAAYCRNSLID---EAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFE 232
EP +Y AL+ +C+ ID E F+ +++ LP V+TY++LI A R +
Sbjct: 476 EPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPT----VHTYTSLIDAMFKDRRLD 531
Query: 233 LIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTI 292
L + M E S TPN VT ++ G + G + ++LS M+E C P+V T +
Sbjct: 532 LAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLS-MMEEKGCSPNVVTYTAL 590
Query: 293 LSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQF 352
+ G+VD+ + + + G P T+ +LI + D+ S++ M++ +
Sbjct: 591 IDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYW 650
Query: 353 PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVI- 411
P Y +V++ FS A E++ + G + LI+ ++ AG + +
Sbjct: 651 PKYLQGYCSVVQGFSKKFIASLG--LLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALE 708
Query: 412 ---SSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ L+S L I Y ++I A A L + +Y + K P+ F +
Sbjct: 709 LHKEMMELSSSLNITSK-DMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLI 767
Query: 469 EAYAK 473
+ K
Sbjct: 768 KGLIK 772
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 166/379 (43%), Gaps = 19/379 (5%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
A Q+ +++ + F P TY K++ L ++ + E A +F EM G+ P YT L+
Sbjct: 272 AFQIIKVMMGKGFV-PDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILI 330
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
++C+ LI++A ++M+++ C +V TY+ L+ A + A + ++ M +
Sbjct: 331 DSFCKAGLIEQARSWFDEMRSI-GCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGC 389
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESA---------------TCKPDVWTMNT 291
PNT+T + ++ G KAG + V + ++ ++ + P+V T
Sbjct: 390 PPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGA 449
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
++ +V + + + G +P ++ LI + K D V M K
Sbjct: 450 LIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCG 509
Query: 352 FPWTSSTYNNVIEA-FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
+ T TY ++I+A F D M+ QM + T+ +I+G G K
Sbjct: 510 YLPTVHTYTSLIDAMFKDRRLDLAMK-VLSQMVESSCTPNVVTYTAMIDGLCRIGECQKA 568
Query: 411 ISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
+ + + + + NV Y A+I K+ + +++ +M K C P+ T+ ++
Sbjct: 569 LKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINH 628
Query: 471 YAKEGMNDKVYALEQEKLQ 489
G+ D+ ++L E Q
Sbjct: 629 CCAAGLLDEAHSLLSEMKQ 647
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 151/362 (41%), Gaps = 30/362 (8%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY LL K Q +++ N M++EG P P L+ +L+ +YC A+
Sbjct: 140 PNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKL 199
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRF------ELIETLYQDMDERSVTPNTV-TQN 254
L +M C P Y+ I + L E +Y++M S N V T N
Sbjct: 200 LKRMADC-GCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTAN 258
Query: 255 I--VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKF 312
L G GK M Q+ +V+ G PD T + +++ +V+ +++
Sbjct: 259 FARCLCGMGKFDMAFQIIKVMMG----KGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEM 314
Query: 313 RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
++ G++P+ T+ ILI ++ K + ++ S + MR + TY ++ A+
Sbjct: 315 KSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQL 374
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVI-SSVRLASKL---- 420
F +M G +T T+ L++G AG ++ K+I +S + S
Sbjct: 375 PQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEG 434
Query: 421 ----QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
IA NV Y A+I KA +++ + + M C P+ + + + + K G
Sbjct: 435 KHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGK 494
Query: 477 ND 478
D
Sbjct: 495 ID 496
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/377 (20%), Positives = 151/377 (40%), Gaps = 46/377 (12%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y+P TY L+ +L +GQ ++ +V EM E G A C+ +A
Sbjct: 36 YRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDAL 95
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
V + + + + D + +I ++A F+ + M S PN VT +L G
Sbjct: 96 VMIER----EDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTG 151
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ K +R+++ M++ C P+ N+++ + N + ++ + G P
Sbjct: 152 FLKKKQLGWCKRIINMMMKEG-CNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPP 210
Query: 320 ETRTFNILIGAYG-------------KKRMYDKMSS------------------------ 342
+NI IG+ +++Y++M +
Sbjct: 211 GYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFD 270
Query: 343 ----VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
+++ M F +STY+ VI + + F++M + G+ D T+ LI
Sbjct: 271 MAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILI 330
Query: 399 NGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCR 458
+ + AGL + S + + NV Y A++ A +KA L + ++ RM + C
Sbjct: 331 DSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCP 390
Query: 459 PDSETFSIMTEAYAKEG 475
P++ T+S + + K G
Sbjct: 391 PNTITYSALVDGLCKAG 407
>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 823
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 142/335 (42%), Gaps = 3/335 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ L K G+ E+A + +E ++G+ T Y L+ AYC++ D A
Sbjct: 342 KPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASK 401
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L Q+ C+PD+ TY LI V + + + + +R V+P+ N+++ G
Sbjct: 402 LLLQLAE-RGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGL 460
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K G F + + S ML+ + PD + T++ F G D + + G+ +
Sbjct: 461 CKTGRFLPAKLLFSEMLDRSIL-PDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVD 519
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
N +I + + M D+ + M M + TY+ +I+ + D F
Sbjct: 520 VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR 579
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
M K + T+ LING+ G F + + + NV Y +I + K
Sbjct: 580 DMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKES 639
Query: 441 DLMEMERVY-KRMKEKHCRPDSETFSIMTEAYAKE 474
+E Y + M C P+ TF+ + + + K+
Sbjct: 640 STLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKK 674
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/373 (19%), Positives = 148/373 (39%), Gaps = 46/373 (12%)
Query: 139 FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCR------- 191
FY G Y KL G E A+ VF E+ +G PT E + ++ +C+
Sbjct: 242 FYNTIIGGYCKL-------GDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVAS 294
Query: 192 -------------------NSLIDEAFVTLNQMKTLP----------NCQPDVYTYSTLI 222
N++ID + + K P +C+PD+ TY+ LI
Sbjct: 295 DRLLEEVKERGLRVCVWFLNNIIDAKY--RHGFKVDPAESIRWIVANDCKPDIATYNILI 352
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
+ E+ L + ++ + ++ ++ Y K+ +D ++L + E C
Sbjct: 353 NRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERG-C 411
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
KPD+ T ++ G +D K + G+ P+ +N+L+ K +
Sbjct: 412 KPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKL 471
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+ M + Y +I+ F GD F +G+K D +I G+
Sbjct: 472 LFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFC 531
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
+G+ + ++ + ++ + + Y+ +I +K D+ ++++ M++ C+P+
Sbjct: 532 RSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVV 591
Query: 463 TFSIMTEAYAKEG 475
T++ + + +G
Sbjct: 592 TYTSLINGFCCQG 604
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 162/369 (43%), Gaps = 13/369 (3%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+++++ + E P LL L+ KS + E ARKV++EM E G +
Sbjct: 152 KAVEIYDYVVELYDSVPDVIACNALLSLVVKSRRLEDARKVYDEMCERGGCVDNYSTCIM 211
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C ++E L + + C P++ Y+T+I E + +++++ +
Sbjct: 212 VKGMCSEGKVEEG-RKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKG 270
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG-QVDM 304
P T ++ G+ K G F +R+L + E + VW +N I+ G +VD
Sbjct: 271 FMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGL-RVCVWFLNNIIDAKYRHGFKVDP 329
Query: 305 ME--RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
E RW P+ T+NILI K+ + + +++ K T+ +Y +
Sbjct: 330 AESIRW---IVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPL 386
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVIS-SVRLASKLQ 421
I+A+ + Q+ G K D T+ LI+G +G ++ V+L +
Sbjct: 387 IQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDR-G 445
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND--- 478
++ + + YN ++S K + + ++ M ++ PD+ ++ + + + + G D
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEAR 505
Query: 479 KVYALEQEK 487
KV+ L EK
Sbjct: 506 KVFTLSVEK 514
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 141/329 (42%), Gaps = 12/329 (3%)
Query: 162 LAR-KVFNEMVE-------EGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
LAR ++FNE+ + E ++ T E + +L AY + + +A + + L + P
Sbjct: 109 LARHRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGFLSKAVEIYDYVVELYDSVP 168
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
DV + L+ V + R E +Y +M ER + + I++ G G ++ +++
Sbjct: 169 DVIACNALLSLVVKSRRLEDARKVYDEMCERGGCVDNYSTCIMVKGMCSEGKVEEGRKLI 228
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
C P++ NTI+ + G ++ + +++ + G P TF +I + K
Sbjct: 229 EDRWGKG-CVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
K + ++E +++ NN+I+A G + + A K D T
Sbjct: 288 KGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIAT 347
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQ-IAENVSFYNAVISACIKADDLMEMERVYKRM 452
+ LIN G + ASK I N+S Y +I A K+ + ++ ++
Sbjct: 348 YNILINRLCKEGKKEVAAGLLDEASKKGLILTNLS-YAPLIQAYCKSKEYDIASKLLLQL 406
Query: 453 KEKHCRPDSETFSIMTEAYAKEG-MNDKV 480
E+ C+PD T+ I+ G M+D V
Sbjct: 407 AERGCKPDIVTYGILIHGLVVSGHMDDAV 435
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 138/353 (39%), Gaps = 39/353 (11%)
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
G+ E RK+ + +G P Y ++ YC+ I+ A + ++K L P + T
Sbjct: 219 GKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELK-LKGFMPTLET 277
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNT-VTQNIVLGGYGKAGMFDQMERVLSGM 276
+ T+I F + L +++ ER + NI+ Y D E +
Sbjct: 278 FGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESI--RW 335
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
+ + CKPD+ T N +++ +G+ ++ ++ G+ ++ LI AY K +
Sbjct: 336 IVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKE 395
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAF---SDMGDAKHM------------------ 375
YD S ++ + + TY +I M DA +M
Sbjct: 396 YDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNM 455
Query: 376 --------------EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+ F +M + D + LI+G+ +G F + L+ +
Sbjct: 456 LMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKG 515
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
+ +V +NA+I ++ L E RM E+H PD T+S + + Y K+
Sbjct: 516 VKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQ 568
>gi|302809819|ref|XP_002986602.1| hypothetical protein SELMODRAFT_124189 [Selaginella moellendorffii]
gi|300145785|gb|EFJ12459.1| hypothetical protein SELMODRAFT_124189 [Selaginella moellendorffii]
Length = 445
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 155/337 (45%), Gaps = 13/337 (3%)
Query: 157 SGQPELARKVFNEMVEEGIEPTP--ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPD 214
+G+ + A+++ E + G+ P L+ +L + +DEA L++M +C+P+
Sbjct: 27 AGEFDEAKRLVEEFKDTGMSPGSLVVLHNLMLKGFSEAGFVDEAKSHLHRM----DCKPN 82
Query: 215 VYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS 274
+Y+TLI A + R + Q M +R V PN VT N + G GKAG+ D+ ++
Sbjct: 83 SVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMATGLGKAGLLDEAFELM- 141
Query: 275 GMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK 334
G++ESA T N ++ G+ D + E I+P T N+++ A+ K
Sbjct: 142 GVMESAGFALTAVTFNPVVEFLCKSGRPDEACKVMETMLLRNIEPNILTLNLILHAFCKA 201
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
++ + + M ++ F T T+N ++E F + E M K + T+
Sbjct: 202 ARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAKLLETMAHSKCKPNFVTY 261
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQI---AENVSFYNAVISACIKADDLMEMERVYKR 451
++ +A G +++ + +L + A N+ NA ++ K ++ R
Sbjct: 262 SIMVQKFAEMG---RMVEARAFLEQLVVCGYAPNLLVCNAYVAGLCKTGEMDLASRFLTV 318
Query: 452 MKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
M E+ CR ++ T++ + E + K G D+ + +E +
Sbjct: 319 MAEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMI 355
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 139/321 (43%), Gaps = 12/321 (3%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY + LGK+G + A ++ M G T + ++ C++ DEA
Sbjct: 116 PNRVTYNAMATGLGKAGLLDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGRPDEACKV 175
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ M L N +P++ T + ++ A A R E + M E P VT N +L +
Sbjct: 176 METM-LLRNIEPNILTLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFC 234
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
D ++L M S CKP+ T + ++ FA G++ + E+ G P
Sbjct: 235 NTDQMDSAAKLLETMAHS-KCKPNFVTYSIMVQKFAEMGRMVEARAFLEQLVVCGYAPNL 293
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
N + K D S + M + ++TYN+++E F +G E E+
Sbjct: 294 LVCNAYVAGLCKTGEMDLASRFLTVMAEEGCRANTATYNSLVEGFCKLGRMDEAERVLEE 353
Query: 382 MHAEGMKADTKTFCCLINGYANAG-LFHKVISSVRLASKLQIA--ENVSFYNAVISACIK 438
M AEG D+ T+ LI G +AG + H + +++ ++ A + +F + C
Sbjct: 354 MIAEGSLPDSTTYSVLIQGLCSAGQIEHAFMVMLQVTRAVESARPDPATFVKLIEKLC-- 411
Query: 439 ADDLMEMER---VYKRMKEKH 456
+L EM+R V +RM ++H
Sbjct: 412 --ELGEMDRAALVLERMGDEH 430
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 117/272 (43%), Gaps = 6/272 (2%)
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT--VTQNIVLGGYGKA 263
KTL +TY TL+ A F+ + L ++ + ++P + V N++L G+ +A
Sbjct: 5 KTLGEFVHSEFTYGTLVHGHCLAGEFDEAKRLVEEFKDTGMSPGSLVVLHNLMLKGFSEA 64
Query: 264 GMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
G D+ + L M CKP+ + NT++ + G++ + G+ P T
Sbjct: 65 GFVDEAKSHLHRM----DCKPNSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVT 120
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
+N + GK + D+ +M M F T+ T+N V+E G E M
Sbjct: 121 YNAMATGLGKAGLLDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGRPDEACKVMETML 180
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
++ + T +++ + A + + + ++ + +NA++ D +
Sbjct: 181 LRNIEPNILTLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMD 240
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++ + M C+P+ T+SIM + +A+ G
Sbjct: 241 SAAKLLETMAHSKCKPNFVTYSIMVQKFAEMG 272
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 144/346 (41%), Gaps = 3/346 (0%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+ L F LK P TY ++ L K+G A + EM + G+ P +Y +
Sbjct: 175 KCLSFFHRLKACGL-SPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMI 233
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ Y R AF M + +PD+ Y+ L+ A A R + + ++++
Sbjct: 234 MDGYARGGDFTAAFKVWEDMVS-AGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANR 292
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P T +L GY K G + V +++A +P V + N++LS A Q++
Sbjct: 293 LLPTIETYTSILDGYVKGGNIQKALEVFD-RIKTAGLRPGVVSYNSLLSGLAKARQMENA 351
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ G+ P R++ L Y + +K + + M+K Y +++A
Sbjct: 352 RLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKA 411
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
G + F+Q+ G+K + T+C +++G+A G K + K +
Sbjct: 412 CCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLD 471
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
Y + I AC ++ D E+ M+EK ++ T++ + +
Sbjct: 472 TICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGW 517
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 149/354 (42%), Gaps = 9/354 (2%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
+ WF+ + ++ P Y ++ ++G E + +M EEG + L
Sbjct: 107 EHWFEKFKAENLV-------PGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGL 159
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
YT +L + ++ +++K P TY ++K A + ++M
Sbjct: 160 YTTVLNGFAEIRDEEKCLSFFHRLKAC-GLSPTAATYGCIVKLFTKAGNMAKALDILEEM 218
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
D+ V+PN + +++ GY + G F +V M+ SA KPD+ N ++ F G+
Sbjct: 219 DKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMV-SAGLKPDIVIYNILVHAFCKAGR 277
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+D E + P T+ ++ Y K K V + ++ +YN+
Sbjct: 278 MDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNS 337
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
++ + ++ +M A G+ + +++ L GYA AG K + K
Sbjct: 338 LLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKEN 397
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+A ++ Y A++ AC K+ + V++++ + + + T+ M + +A++G
Sbjct: 398 LAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKG 451
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/350 (18%), Positives = 147/350 (42%), Gaps = 7/350 (2%)
Query: 124 WFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
W + + F+++ ++P + Y L+ + G AR F M I+P +YT
Sbjct: 2 WHKIVNAFQVI-DKPVLRE----YGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYT 56
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
+L+ AY ++ A +M + Q + + ++I A E E ++
Sbjct: 57 SLIHAYAEARDMEGAVACTEEMLS-QGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKA 115
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
++ P + N ++ Y +AG + +E +L+ M E + ++ T+L+ FA +
Sbjct: 116 ENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGF-QGNLGLYTTVLNGFAEIRDEE 174
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
++ + + G+ P T+ ++ + K K ++E M K Y ++
Sbjct: 175 KCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIM 234
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
+ ++ GD +E M + G+K D + L++ + AG K + + ++
Sbjct: 235 DGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLL 294
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ Y +++ +K ++ + V+ R+K RP +++ + AK
Sbjct: 295 PTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAK 344
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 127/309 (41%), Gaps = 39/309 (12%)
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
+P Y L+ Y R+ A T M+ + +P+V+ Y++LI A +A
Sbjct: 14 KPVLREYGLLVDFYARHGDKVAARATFEAMRA-SHIKPNVHIYTSLIHAYAEA------- 65
Query: 236 TLYQDMDER-SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILS 294
+DM+ + T ++Q I L E+ C +I+S
Sbjct: 66 ---RDMEGAVACTEEMLSQGIQLN-------------------EAVFC--------SIIS 95
Query: 295 VFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPW 354
+A+ G + E W+EKF+ + P +N ++ AY + + + +++ M + F
Sbjct: 96 GYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQG 155
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
Y V+ F+++ D + F ++ A G+ T+ C++ + AG K + +
Sbjct: 156 NLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDIL 215
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
K ++ N Y ++ + D +V++ M +PD ++I+ A+ K
Sbjct: 216 EEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKA 275
Query: 475 GMNDKVYAL 483
G DK +
Sbjct: 276 GRMDKALGV 284
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 126/304 (41%), Gaps = 16/304 (5%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P Y L+ K+G+ + A V + + PT E YT++L Y + I +A
Sbjct: 259 KPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALE 318
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+++KT +P V +Y++L+ A + E + +M V PN + + GY
Sbjct: 319 VFDRIKT-AGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGY 377
Query: 261 GKAG-------MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
+AG MF +M++ D+ +L G + +++
Sbjct: 378 ARAGDVEKAFGMFQRMKK--------ENLAIDIVAYGALLKACCKSGAMQRAAEVFQQIT 429
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
+ G+ T+ ++ + +K K ++ M+K F + Y + I+A GD +
Sbjct: 430 DAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTE 489
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
+ T M + ++ + +T+ LI+G+ A + IS A + + + N ++
Sbjct: 490 EVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSALSNCLL 549
Query: 434 SACI 437
S I
Sbjct: 550 SGLI 553
>gi|302757495|ref|XP_002962171.1| hypothetical protein SELMODRAFT_77736 [Selaginella moellendorffii]
gi|300170830|gb|EFJ37431.1| hypothetical protein SELMODRAFT_77736 [Selaginella moellendorffii]
Length = 731
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 170/400 (42%), Gaps = 55/400 (13%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
++ W +A++VF + Q Y+ Y LL LG++ + EL +K ++EM+ E + PT
Sbjct: 94 QRDWRKAIEVFSWFQRQDNYEANVFLYNILLRTLGRAAKWELLQKYWSEMLGERVPPTIF 153
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY------------------------ 216
Y+ L+ + R + DEA M +PD
Sbjct: 154 TYSILVDVHGRAGMKDEAIRFYRHM-IESGVEPDEVMVSTYMNLQRRFGDLEEAEKAFWG 212
Query: 217 ------------------TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
T++T+I + +F ++ +M + V TVT N ++
Sbjct: 213 LFSENLVDGTTKRPENPETFNTMISFYGEHAKFAEASKVFAEMMKAGVELTTVTFNAMIH 272
Query: 259 GYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
YGKAG + E +++ M + C PDV T N+++ ++ +++++ E+ R+ G+
Sbjct: 273 VYGKAGRTREAELLVTKMKQRKDCCPDVATYNSLIEMYVKNDKLELVSGCLERMRDSGVS 332
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P+ TF LI AY + K ++++ M F + Y +I + D E
Sbjct: 333 PDQVTFRTLISAYAANNVVWKAEALVQEMEGSGFFIDQAMYTVMIAMYVRARDVSKAESV 392
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV-----SFYNAVI 433
F +H+ G + T+ +++ YA HK + R ++A+N S YN ++
Sbjct: 393 FRFLHSRG-GLEVSTYVGVMDVYAE----HKCLDQAR--EVFELAKNAGLKTPSLYNVMM 445
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
A D + V++ M++ P+ +F+ + + K
Sbjct: 446 KAYGACDRFTDAVTVFEAMEKDGASPNEASFNSLIQLLCK 485
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/400 (20%), Positives = 152/400 (38%), Gaps = 73/400 (18%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
T+ ++ G+ + A KVF EM++ G+E T + A++ Y + EA + + +M
Sbjct: 231 TFNTMISFYGEHAKFAEASKVFAEMMKAGVELTTVTFNAMIHVYGKAGRTREAELLVTKM 290
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELI------------------------------- 234
K +C PDV TY++LI+ V + EL+
Sbjct: 291 KQRKDCCPDVATYNSLIEMYVKNDKLELVSGCLERMRDSGVSPDQVTFRTLISAYAANNV 350
Query: 235 ----ETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMN 290
E L Q+M+ + +++ Y +A + E V + +V T
Sbjct: 351 VWKAEALVQEMEGSGFFIDQAMYTVMIAMYVRARDVSKAESVFRFLHSRGGL--EVSTYV 408
Query: 291 TILSVFANKGQVDMMERWYEKFRNFGI--------------------------------- 317
++ V+A +D +E +N G+
Sbjct: 409 GVMDVYAEHKCLDQAREVFELAKNAGLKTPSLYNVMMKAYGACDRFTDAVTVFEAMEKDG 468
Query: 318 -DPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME 376
P +FN LI K R+ + + V+ ++ F + ++ ++V+ + DMG + E
Sbjct: 469 ASPNEASFNSLIQLLCKGRLLEILQRVLVLVKAAGFKPSLASCSSVVSFYGDMGRVREAE 528
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
F++M A G++AD + L+N YA AG + ++ + Y +++
Sbjct: 529 RVFKEMLASGVEADVICYSALLNAYAEAGFAREAQQTLDSLKAAGFVPDTIVYTSMMKLY 588
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
E E++Y+ + PD + M Y K GM
Sbjct: 589 SNLGLTAEAEKIYEEI--SRLSPDVFAANTMLNLYIKSGM 626
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 129/290 (44%), Gaps = 35/290 (12%)
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
N + +V+ Y+ L++ A ++EL++ + +M V P T +I++ +G+AGM D+
Sbjct: 112 NYEANVFLYNILLRTLGRAAKWELLQKYWSEMLGERVPPTIFTYSILVDVHGRAGMKDEA 171
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
R M+ES +PD ++T +++ G ++ E+ + +G+ E N++ G
Sbjct: 172 IRFYRHMIESGV-EPDEVMVSTYMNLQRRFGDLEEAEKAF-----WGLFSE----NLVDG 221
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+ P T+N +I + + F +M G++
Sbjct: 222 TTKR-------------------PENPETFNTMISFYGEHAKFAEASKVFAEMMKAGVEL 262
Query: 390 DTKTFCCLINGYANAGLFHKV-ISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
T TF +I+ Y AG + + ++ + +V+ YN++I +K D L +
Sbjct: 263 TTVTFNAMIHVYGKAGRTREAELLVTKMKQRKDCCPDVATYNSLIEMYVKNDKLELVSGC 322
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGHW 498
+RM++ PD TF + AYA + K AL QE +E SG +
Sbjct: 323 LERMRDSGVSPDQVTFRTLISAYAANNVVWKAEALVQE-----MEGSGFF 367
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/328 (18%), Positives = 137/328 (41%), Gaps = 36/328 (10%)
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y ++ Y + +D+A K P +Y + ++KA RF T+++ M
Sbjct: 407 YVGVMDVYAEHKCLDQAREVFELAKNAGLKTPSLY--NVMMKAYGACDRFTDAVTVFEAM 464
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
++ +PN + N ++ K + + ++RVL ++++A KP + + ++++S + + G+
Sbjct: 465 EKDGASPNEASFNSLIQLLCKGRLLEILQRVLV-LVKAAGFKPSLASCSSVVSFYGDMGR 523
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
V ER +++ G++ + ++ L+ AY + + ++ ++ F + Y +
Sbjct: 524 VREAERVFKEMLASGVEADVICYSALLNAYAEAGFAREAQQTLDSLKAAGFVPDTIVYTS 583
Query: 362 VIEAFSDMGDAKHMEYTFEQMH-----------------AEGM--------------KAD 390
+++ +S++G E +E++ GM K
Sbjct: 584 MMKLYSNLGLTAEAEKIYEEISRLSPDVFAANTMLNLYIKSGMFTEAEQLFRAMQRGKPG 643
Query: 391 TKTFCC--LINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
C ++ Y AG + + R+ S+ + + +N VI+ +KA + E
Sbjct: 644 LNEVACTMMLKLYREAGKIEQGLDVARVMSRRFLITDARAFNGVIAMYVKAGLMREALEA 703
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGM 476
K M+ P TFS E + GM
Sbjct: 704 LKEMRRAGLVPSRSTFSCFEEILERAGM 731
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 170/379 (44%), Gaps = 12/379 (3%)
Query: 108 VNTVAETFSDHVLKKQWFQALQVFEMLKEQPFY--QPKEGTYMKLLVLLGKS-GQPELAR 164
+NT + F LK Q QAL + L F+ Q GT + L +G++ EL R
Sbjct: 143 LNTFIKGFC---LKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLR 199
Query: 165 KVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
+V ++V+ + +Y+ ++ + C++ +++AF ++M + ++ TYS LI
Sbjct: 200 RVDGKLVQLDVV----MYSTIIDSMCKDKNVNDAFDLYSEMVS-RRISSNIVTYSALISG 254
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
+ + L+ M ++ P+ T NI++ + K G + + L+ M++ KP
Sbjct: 255 FCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGI-KP 313
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
D+ T N+++ + +V+M + + G+ R++NI+I + K +M D+ +
Sbjct: 314 DIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLF 373
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
+ M Q TYN++I+ G + + MH G + D T+ +++
Sbjct: 374 KEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKN 433
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
L K I+ + I N+ Y +I K L + +++ + K T+
Sbjct: 434 HLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTY 493
Query: 465 SIMTEAYAKEGMNDKVYAL 483
++M + + G+ D+ +L
Sbjct: 494 TVMIQGFCSHGLFDEALSL 512
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 138/343 (40%), Gaps = 37/343 (10%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ G+ + A +FN+M E I P + L+ A+C+ + EA L M
Sbjct: 247 TYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMM 306
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+PD+ TY++L+ + +++ M R VT + NIV+ G+ K M
Sbjct: 307 MK-QGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKM 365
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
DQ ++ M P+V T N+++ G++ + + G P+ T++
Sbjct: 366 VDQAMKLFKEM-HHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYS 424
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
++ A K + DK +++ ++ TY +I+ G + FE + +
Sbjct: 425 SILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVK 484
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G T+ +I G+ + GLF + +S
Sbjct: 485 GYNLTVNTYTVMIQGFCSHGLFDEALS--------------------------------- 511
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
+ +MK+ C PD+ T+ I+ + + NDK L +E +
Sbjct: 512 --LLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMI 552
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 168/395 (42%), Gaps = 42/395 (10%)
Query: 126 QALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
A+ +F +L++ P P + + ++L L KS +F +M GI+P +
Sbjct: 53 DAVSLFNCLLRQNP--TPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNI 110
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CV-----DAMRF-ELIETL 237
L+ +C+ LI AF L ++ + +PD T +T IK C+ A+ F + + L
Sbjct: 111 LINCFCQLGLIPFAFSVLAKILKMGY-EPDTITLNTFIKGFCLKGQIHQALNFHDKLVAL 169
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKA---------GMFDQMERVLSGMLESATCK----- 283
+D+ V+ T+ + G +A G Q++ V+ + + CK
Sbjct: 170 GFHLDQ--VSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVN 227
Query: 284 ---------------PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
++ T + ++S F G++ + K + I+P+ TFNIL+
Sbjct: 228 DAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILV 287
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
A+ K+ + + + M K TYN++++ + + + + M G+
Sbjct: 288 DAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVT 347
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERV 448
A +++ +ING+ + + + + QI NV YN++I K+ + +
Sbjct: 348 ATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALEL 407
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
M ++ +PD T+S + +A K + DK AL
Sbjct: 408 IDLMHDRGQQPDIITYSSILDALCKNHLVDKAIAL 442
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 131/309 (42%), Gaps = 37/309 (11%)
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
PD+ + ++ + V + + + +L+Q M+ R + PN V NI++ + + G+ V
Sbjct: 69 PDM-EFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSV 127
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
L+ +L+ +PD T+NT + F KGQ+ +++K G + ++ LI
Sbjct: 128 LAKILKMGY-EPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLC 186
Query: 333 K-----------KRMYDKM--------SSVMEYMRKLQ-----FPWTSS----------- 357
K +R+ K+ S++++ M K + F S
Sbjct: 187 KVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIV 246
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
TY+ +I F +G K F +M +E + D TF L++ + G + + + +
Sbjct: 247 TYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMM 306
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
K I ++ YN+++ +++ + + M + +++I+ + K M
Sbjct: 307 MKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMV 366
Query: 478 DKVYALEQE 486
D+ L +E
Sbjct: 367 DQAMKLFKE 375
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/247 (19%), Positives = 103/247 (41%), Gaps = 2/247 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ + +A+ + N M G+ T Y ++ +C+ ++D+A
Sbjct: 312 KPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMK 371
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M P+V TY++LI + R L M +R P+ +T + +L
Sbjct: 372 LFKEMHH-KQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDAL 430
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K + D+ +L + + +P+++T ++ G+++ +E G +
Sbjct: 431 CKNHLVDKAIALLIKLKDQGI-RPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLT 489
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
T+ ++I + ++D+ S++ M+ + TY +I + D + E
Sbjct: 490 VNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLR 549
Query: 381 QMHAEGM 387
+M G+
Sbjct: 550 EMITRGL 556
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 2/121 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ + LK+Q +P TY L+ L K G+ E AR +F +++ +G T YT +
Sbjct: 438 KAIALLIKLKDQGI-RPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVM 496
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +C + L DEA L++MK +C PD TY +I + D + E L ++M R
Sbjct: 497 IQGFCSHGLFDEALSLLSKMKD-NSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRG 555
Query: 246 V 246
+
Sbjct: 556 L 556
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 163/386 (42%), Gaps = 41/386 (10%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY+ LL G +G +++N M +G YTA++ A C+ +DEA
Sbjct: 318 KPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASD 377
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+QMK +P Y+Y++LI + A R L+ M+ TPN T + + Y
Sbjct: 378 VFDQMKQ-KGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYY 436
Query: 261 GKAG-MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
GK+G ++R +++S PDV N +L A G++ M +R + + ++ G+ P
Sbjct: 437 GKSGESLKAIKRY--ELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCP 494
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYM-------------------------------- 347
+ T+ ++I K D+ V M
Sbjct: 495 DNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIF 554
Query: 348 ---RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
+++ T TYN ++ G K + + E+M++ + T+ +++
Sbjct: 555 HELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKN 614
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
G + + + + ++S YN + +K D L E R++ +MK K PD T
Sbjct: 615 GEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMK-KVLAPDYTTL 673
Query: 465 SIMTEAYAKEG-MNDKVYALEQEKLQ 489
+ ++ K G MN+ ++ L++ LQ
Sbjct: 674 CTILPSFVKNGLMNEALHTLKEYILQ 699
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 163/392 (41%), Gaps = 4/392 (1%)
Query: 98 LERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKS 157
L ++ KA V T F ++ A M+KE TY L+ L KS
Sbjct: 137 LMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVL-NSYTYNGLIYFLVKS 195
Query: 158 GQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT 217
G A +V+ M +GI P+ Y+ L+ A+ + + E V L + +P+VY+
Sbjct: 196 GYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKRDV--ETVVWLLREMEDHGVKPNVYS 253
Query: 218 YSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
Y+ I+ A RFE + Q M++ P+ VT +++ AG + V M
Sbjct: 254 YTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKM- 312
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
+++ KPD T T+L + G + + + G + + ++ A +
Sbjct: 313 KASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRV 372
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
D+ S V + M++ +YN++I F H F M+ G + T+
Sbjct: 373 DEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLF 432
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHC 457
IN Y +G K I L I +V NAV+ + K+ L +RV+ +K
Sbjct: 433 INYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGV 492
Query: 458 RPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
PD+ T+++M + +K D+ + E ++
Sbjct: 493 CPDNITYTMMIKCCSKASNADEAMKVFSEMIE 524
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 170/402 (42%), Gaps = 25/402 (6%)
Query: 82 PGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQ 141
PG ++ R+ +L + + ++A + + ++ + + + +L + F
Sbjct: 700 PGSKADRSSFHSLMEGILKRAGMEKSI--------------EFAENIALSRILLDDFFLS 745
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P L+ L KS + A ++ + G+ Y AL+ +LID A
Sbjct: 746 P-------LIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGL 798
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
++MK L C PD +TY+ ++ A +MR E + + ++M + VT N ++ G
Sbjct: 799 FSEMKRL-GCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLV 857
Query: 262 KAGM-FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K+ M ++ M+ M E + P T +L G+++ E +++ ++G P
Sbjct: 858 KSKMLYEAMDLYYKLMSEGFS--PTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPN 915
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+NIL+ Y +K+ + + M +Y +I A G F
Sbjct: 916 RAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFR 975
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKAD 440
Q+ G++ D T+ LI+G +G + +S K IA N+ YN++I K
Sbjct: 976 QLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEG 1035
Query: 441 DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA 482
E ++Y+ + + +P+ T++ + Y+ G D +A
Sbjct: 1036 KAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFA 1077
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 159/385 (41%), Gaps = 40/385 (10%)
Query: 125 FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+A++ +E++K + P +L L KSG+ +A++VF+E+ G+ P YT
Sbjct: 443 LKAIKRYELMKSKGIV-PDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTM 501
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
++ + S DEA ++M C PDV ++LI A R ++ ++ E
Sbjct: 502 MIKCCSKASNADEAMKVFSEMIE-TRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEM 560
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
++ P T N +L G G+ G ++ +L M S + P++ T NT+L G+V+
Sbjct: 561 NLDPTDCTYNTLLAGLGREGKVKEVMHLLEEM-NSNSYPPNLITYNTVLDCLCKNGEVNY 619
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
G P+ ++N + K+ + + M+K+ P +T ++
Sbjct: 620 ALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKVLAP-DYTTLCTILP 678
Query: 365 AFSDMGDAKHMEYTF-EQMHAEGMKADTKTFCCLING-YANAGL-----FHKVISSVRLA 417
+F G +T E + G KAD +F L+ G AG+ F + I+ R+
Sbjct: 679 SFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRIL 738
Query: 418 -----------------------------SKLQIAENVSFYNAVISACIKADDLMEMERV 448
L ++ YNA+I + + + E +
Sbjct: 739 LDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGL 798
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAK 473
+ MK C PD T++++ +A K
Sbjct: 799 FSEMKRLGCDPDEFTYNLILDAMGK 823
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 161/396 (40%), Gaps = 40/396 (10%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A ++F LKE P + TY LL LG+ G+ + + EM P Y +
Sbjct: 549 EAWKIFHELKEMNL-DPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTV 607
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L C+N ++ A L M T+ C PD+ +Y+T + V R ++ M ++
Sbjct: 608 LDCLCKNGEVNYALGMLYNM-TMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQM-KKV 665
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQ------------------------MERVL--SGMLES 279
+ P+ T +L + K G+ ++ ME +L +GM +S
Sbjct: 666 LAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKS 725
Query: 280 ATCKPDVWTMNTILSVF----------ANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
++ +L F +K ++ E +KF + G+ +T ++N LI
Sbjct: 726 IEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHE-LVKKFESLGVSLKTGSYNALIC 784
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+ + D + M++L TYN +++A + M ++MH +G ++
Sbjct: 785 GLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYES 844
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
T+ +I+G + + ++ + + Y ++ +K + + E ++
Sbjct: 845 TYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLF 904
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
M + C+P+ ++I+ Y G +KV L Q
Sbjct: 905 DEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQ 940
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 129/292 (44%), Gaps = 7/292 (2%)
Query: 113 ETFSDHVLKKQWFQALQVFEMLKEQP-----FYQPKEGTYMKLLVLLGKSGQPELARKVF 167
+ F+ +++ +++++ +MLK Q Y+ TY ++ L KS A ++
Sbjct: 810 DEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLY 869
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
+++ EG PTP Y LL ++ I++A ++M C+P+ Y+ L+
Sbjct: 870 YKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDY-GCKPNRAIYNILLNGYRL 928
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
A E + L+Q+M ++ + P+ + +++G AG + + E +PD+
Sbjct: 929 AGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGL-EPDLI 987
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T N ++ G+++ + GI P T+N LI GK+ + + E +
Sbjct: 988 TYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEEL 1047
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
K + TYN +I +S G + ++ QM G ++ T+ L N
Sbjct: 1048 LKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQLPN 1099
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 137/349 (39%), Gaps = 39/349 (11%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A ++F +M ++ + P +L ++ +N L++EA TL + P + D ++ +L+
Sbjct: 655 AFRIFCQM-KKVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLM 713
Query: 223 KACVD----------AMRFELIETLYQDM-------------------------DERSVT 247
+ + A L L D + V+
Sbjct: 714 EGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVS 773
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMER 307
T + N ++ G + D E + S M + C PD +T N IL +++ M +
Sbjct: 774 LKTGSYNALICGLVDENLIDVAEGLFSEM-KRLGCDPDEFTYNLILDAMGKSMRIEDMLK 832
Query: 308 WYEKFRNFGIDPETRTFNILIGAYGKKRM-YDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
++ G + T+N +I K +M Y+ M + M + F T TY +++
Sbjct: 833 VQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSE-GFSPTPCTYGPLLDGL 891
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G + E F++M G K + + L+NGY AG KV + I ++
Sbjct: 892 LKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDI 951
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
Y +I A A L + ++++ E PD T++++ + G
Sbjct: 952 KSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSG 1000
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 54/131 (41%)
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
T+ + N ++E G + M F+ M + +KA+ TF + G ++
Sbjct: 111 TTESCNYMLELMRAHGRVRDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVAL 170
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
+ + I N YN +I +K+ E VYK M P T+S++ A+ K
Sbjct: 171 PMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKR 230
Query: 475 GMNDKVYALEQ 485
+ V+ L +
Sbjct: 231 DVETVVWLLRE 241
>gi|297820746|ref|XP_002878256.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324094|gb|EFH54515.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 164/355 (46%), Gaps = 43/355 (12%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K+W ++ E L+ Q ++ E ++ L+ GK G A +V + + + G P
Sbjct: 117 KKWNLVSEILEWLRYQNWWNFSEMDFLMLITAYGKLGNFNGAERVLSVLSKMGSSPNVIS 176
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
YTAL+ +Y R + A +M++ +P TY ++K V+ +F+ E +++ +
Sbjct: 177 YTALMESYGRGGKCNNAEAIFRRMQS-SGPEPSAVTYQIILKTFVEGDKFKEAEEVFETL 235
Query: 242 -DERS--VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
DE+ + P+ ++++ Y KAG +D+ +V S M+ + V T N+++S N
Sbjct: 236 LDEKKSPLKPDQKMYHMMIYMYKKAGNYDKARKVFSSMVGKGVPQSTV-TYNSLMSFETN 294
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
+V + Y++ + GI P+ ++ +LI AYG+ R ++ SV
Sbjct: 295 YKEVS---KIYDQMQRSGIQPDVVSYALLIKAYGRARREEEALSV--------------- 336
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
FE+M G++ K + L++ +A +G+ + + +
Sbjct: 337 --------------------FEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 376
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ +I ++ Y ++SA + A D+ E+ +KR+K P+ T+ M + YAK
Sbjct: 377 RDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAK 431
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 137/280 (48%), Gaps = 9/280 (3%)
Query: 126 QALQVFEML---KEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+A +VFE L K+ P +P + Y ++ + K+G + ARKVF+ MV +G+ + Y
Sbjct: 227 EAEEVFETLLDEKKSPL-KPDQKMYHMMIYMYKKAGNYDKARKVFSSMVGKGVPQSTVTY 285
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
+L++ + + + +QM+ QPDV +Y+ LIKA A R E +++++M
Sbjct: 286 NSLMSFETNYKEVSKIY---DQMQR-SGIQPDVVSYALLIKAYGRARREEEALSVFEEML 341
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
+ V P NI+L + +GM +Q + V M PD+W+ T+LS + N +
Sbjct: 342 DAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIF-PDLWSYTTMLSAYVNASDM 400
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ E+++++ + G +P T+ +I Y K +KM V E MR + +
Sbjct: 401 EGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTI 460
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
++A D +++M + G+ D K L++ Y+
Sbjct: 461 MDASGRCKDFGSALGWYKEMESCGVPPDQKAKNVLLSLYS 500
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 156/352 (44%), Gaps = 6/352 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ KS A ++ EM + P+P Y+ L++ C +S + +A
Sbjct: 413 EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANE 472
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
L+QM +P+V+ Y TLIKA V R+E+ L + M V P+ N ++ G
Sbjct: 473 VLDQM-IRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGL 531
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+A ++ + +L M E KP+ T +++++ G++ + ER+++ + GI P
Sbjct: 532 CRAKKVEEAKMLLVDMGEKGI-KPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPN 590
Query: 321 TRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ ILI G + +S+ + K P + Y+ +I + S G K F
Sbjct: 591 NVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRA-YSAIIHSLSKNGKTKEAMGVF 649
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVIS--ACI 437
+ G+ D + LI+G+ G K I N+ YN +I+
Sbjct: 650 LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYC 709
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
K+ +L E +++ M K PD + I+ + KEG +K +L E Q
Sbjct: 710 KSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQ 761
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 143/334 (42%), Gaps = 3/334 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY ++ K G + V +EM E+ +P Y A + C+ +DEA +
Sbjct: 240 PDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEA-LE 297
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+ ++ PD +TY+ L+ R + + +++ M + PN T ++ G+
Sbjct: 298 VKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFI 357
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G ++ R+ M+ K +V T N ++ A G++ + + GI+P+T
Sbjct: 358 KEGNIEEALRIKDEMITRGL-KLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDT 416
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+N+LI Y K K ++ M+ + + TY+ +I D + +Q
Sbjct: 417 WTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQ 476
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M G+K + + LI Y + I +++ + ++ YN +I +A
Sbjct: 477 MIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKK 536
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ E + + M EK +P++ T+ Y+K G
Sbjct: 537 VEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSG 570
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 149/337 (44%), Gaps = 5/337 (1%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY + L KSG+ ++A + F +M+ GI P +YT L+ +C EA
Sbjct: 553 KPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALS 612
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
T M PD+ YS +I + + + ++ + V P+ N ++ G+
Sbjct: 613 TFKCMLE-KGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGF 671
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA--NKGQVDMMERWYEKFRNFGID 318
K G ++ ++ ML + P++ NT+++ + G + + +++ + GI
Sbjct: 672 CKEGDIEKASQLYDEMLHNGI-NPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGIS 730
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
P+ + ILI GK+ +K S+ ++ + + S +N++I++F G
Sbjct: 731 PDGYIYCILIDGCGKEGNLEKALSLFHEAQQ-KSVGSLSAFNSLIDSFCKHGKVIEAREL 789
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIK 438
F+ M + + + T+ LI+ Y A + + I N Y +++ + +
Sbjct: 790 FDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQ 849
Query: 439 ADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ +M ++K M+ + D+ + +M AY KEG
Sbjct: 850 IGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEG 886
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 160/369 (43%), Gaps = 3/369 (0%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+K+ +A +FE + P TY L+ K G E A ++ +EM+ G++
Sbjct: 324 QKRSKEAKLIFESMPSSGL-NPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVV 382
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
Y A++ + + +A N+M + +PD +TY+ LI + + L +
Sbjct: 383 TYNAMIGGIAKAGEMAKAMSLFNEM-LMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAE 441
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
M R +TP+ T ++++ G + + VL M+ + KP+V+ T++ + +
Sbjct: 442 MKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGV-KPNVFMYGTLIKAYVQES 500
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+ +M + G+ P+ +N LI + + ++ ++ M + + TY
Sbjct: 501 RYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYG 560
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
I +S G+ + E F+ M + G+ + + LI G+ + G + +S+ + +
Sbjct: 561 AFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEK 620
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+ ++ Y+A+I + K E V+ + + PD ++ + + KEG +K
Sbjct: 621 GLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKA 680
Query: 481 YALEQEKLQ 489
L E L
Sbjct: 681 SQLYDEMLH 689
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 164/363 (45%), Gaps = 20/363 (5%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL F+ + E+ P Y ++ L K+G+ + A VF + ++ G+ P LY +L
Sbjct: 609 EALSTFKCMLEKGLI-PDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSL 667
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPN-CQPDVYTYSTLIKACVDAMRFELIET--LYQDMD 242
++ +C+ I++A ++M L N P++ Y+TLI L E L+ +M
Sbjct: 668 ISGFCKEGDIEKASQLYDEM--LHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMI 725
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP--DVWTMNTILSVFANKG 300
+ ++P+ I++ G GK G +E+ LS + A K + N+++ F G
Sbjct: 726 SKGISPDGYIYCILIDGCGKEG---NLEKALS-LFHEAQQKSVGSLSAFNSLIDSFCKHG 781
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+V ++ + + P T+ ILI AYGK M ++ + M + TY
Sbjct: 782 KVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYT 841
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+++ +++ +G+ M F+ M A G+ D + + + Y G K + +++L +K
Sbjct: 842 SLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEG---KSLEALKLLNK- 897
Query: 421 QIAENVSFYNAVISACI----KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
+ E + + V A I K + + + M ++ S+T + + + K G
Sbjct: 898 SLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGN 957
Query: 477 NDK 479
D+
Sbjct: 958 EDE 960
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 107/258 (41%), Gaps = 2/258 (0%)
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
P + + L++ + A L +Y M E + P+ T V+ + K G + + V
Sbjct: 205 PTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMV 264
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
LS M CKP+++T N + G VD + G+ P+ T+ +L+ +
Sbjct: 265 LSEM--EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFC 322
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K++ + + E M TY +I+ F G+ + ++M G+K +
Sbjct: 323 KQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVV 382
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
T+ +I G A AG K +S I + YN +I +K+ D+ + + M
Sbjct: 383 TYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEM 442
Query: 453 KEKHCRPDSETFSIMTEA 470
K + P T+S++
Sbjct: 443 KARKLTPSPFTYSVLISG 460
>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g19290-like [Cucumis
sativus]
Length = 885
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 156/358 (43%), Gaps = 3/358 (0%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
+ LK Q AL + ++ E +P T+ ++ K G ELARK F+E+ + G+
Sbjct: 302 NCLKGQSSYALHLLNLMIENG-CKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQ 360
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
+Y +++ Y + I +A + +M+T + PD T++TL+ + E L
Sbjct: 361 NTIVYNIMISGYVKARDISQANLLFEEMRT-KDIVPDGITFNTLVAGHYRYGKEEDGNRL 419
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
+D+ + ++ ++ + G AG +D+ ++L +LE P V N+I++ +
Sbjct: 420 LRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGI-PPSVVAFNSIIAAYG 478
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
N G + Y FG+ P + T + L+ + +K D+ + M FP T+
Sbjct: 479 NAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNM 538
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
+ +++ + +G E + +M G+ D F ING +GL
Sbjct: 539 AFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDM 598
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ N YN++I K L E ++ + M ++ PD T +++ K+G
Sbjct: 599 LRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQG 656
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 151/357 (42%), Gaps = 10/357 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+++ E L E+ P + ++ G +G E A + MV+ G+ P+ ++L
Sbjct: 450 EAMKLLENLLEKGI-PPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSL 508
Query: 186 LAAYCRNSLIDEAFVTLNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
L + R +DEA++ L M K P ++ L+ + E+L+ +M
Sbjct: 509 LISLVRKGSLDEAWIALYDMIDKGFPVTN---MAFTVLLDGYFRIGAVNMAESLWNEMKG 565
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
R V P+ V + G +G+ V S ML P+ + N+++ F G+++
Sbjct: 566 RGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFV-PNNFVYNSLIGGFCKVGKLN 624
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ + G+ P+ T N++I K+ RM + + M+ R P TYN +
Sbjct: 625 EALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSP-DIVTYNTL 683
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I+ + D + +M G + D T+ I+GY ++ + + + I
Sbjct: 684 IDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGI 743
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
N YN +I+A M K +K P++ T +++ + K+GM +K
Sbjct: 744 VPNTVTYNTMINAVCNVILDHAMILTAKLLKMAFV-PNTVTVNVLLSQFCKQGMPEK 799
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 145/373 (38%), Gaps = 39/373 (10%)
Query: 110 TVAETFSDHVLKKQW-FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
+V +T +K + F+AL++ ++E P L LL ++G K+F
Sbjct: 188 SVLDTLMQAFVKSEMHFEALEILSKMREVGV-TPNPSAISILFRLLIRAGDCGAVWKLFG 246
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
++V +G P + L+ +CR L+ M C+PDVY+Y
Sbjct: 247 DVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKF-RCEPDVYSY---------- 295
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
NIV+ G +L+ M+E+ CKP + T
Sbjct: 296 -------------------------NIVINANCLKGQSSYALHLLNLMIENG-CKPSIAT 329
Query: 289 MNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
TI+ F +G V++ +++++ + G+ T +NI+I Y K R + + + E MR
Sbjct: 330 FCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMR 389
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
T+N ++ G + + G+ D+ + G AG +
Sbjct: 390 TKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYD 449
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
+ + + + I +V +N++I+A A Y M + P S T S +
Sbjct: 450 EAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLL 509
Query: 469 EAYAKEGMNDKVY 481
+ ++G D+ +
Sbjct: 510 ISLVRKGSLDEAW 522
>gi|242094172|ref|XP_002437576.1| hypothetical protein SORBIDRAFT_10g029640 [Sorghum bicolor]
gi|241915799|gb|EER88943.1| hypothetical protein SORBIDRAFT_10g029640 [Sorghum bicolor]
Length = 429
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 147/322 (45%), Gaps = 2/322 (0%)
Query: 165 KVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
++ +M ++G+ YT LL AY R +++++ L +M+ + D YS L++
Sbjct: 66 RLLLQMADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMRR-RGIRLDTAGYSMLVRL 124
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
D ++ L +M E V + + ++ +GK G RV M + KP
Sbjct: 125 YRDNGMWKKAIDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRVFDKM-RAEGIKP 183
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
D+ T N ++ G + R++ + G+ P+ + F ++I G++ +D++ +
Sbjct: 184 DISTWNALIQWHCRVGNMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWDEIKKLF 243
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
+ M+ F + + Y +++ + G + + AE M+ + FC L N YA
Sbjct: 244 DGMKNRGFKESGAVYAVLVDIYGQYGHFRDARECIAALRAENMQLSPRVFCVLANAYAQQ 303
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
GL + ++ ++L + N+ N +I+A A +E V++ +K+ PD T+
Sbjct: 304 GLCEQTVNVLQLMEEEGFEPNLVMLNLLINAFGTAGRHLEALAVFQHIKDSGMSPDVVTY 363
Query: 465 SIMTEAYAKEGMNDKVYALEQE 486
+ + + + + +KV + +E
Sbjct: 364 TTLMKTFMRAKKFEKVSEVYRE 385
>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
Length = 794
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 157/398 (39%), Gaps = 54/398 (13%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L K G A K+F+EM++ GI P ++YT LL++ C IDEA
Sbjct: 205 PNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQL 264
Query: 202 LNQMKTLPNCQPDVYT-----------------------------------YSTLIKACV 226
L MK C PD T YS LI
Sbjct: 265 LGSMKD-KGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLF 323
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
A RF+ Y+ M ER+++P+ V I++ G +AG + L M + PD
Sbjct: 324 QARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFV-PDT 382
Query: 287 WTMNTILSVFANKGQVDMMERWYEKF--RNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
+ NT+L V + G ++ + N +D T+T I+I K+ + D+ +
Sbjct: 383 FCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQT--IMICGLCKRGLVDEAMQIF 440
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH-------------AEGMKADT 391
+ M + T TYN +I+ F G + F +M D+
Sbjct: 441 DEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDS 500
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
++ L++ +G K +R + +V YN +I+ KA +L R++K
Sbjct: 501 ESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKE 560
Query: 452 MKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
++ K PD T+ + + + + L Q LQ
Sbjct: 561 LQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQ 598
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 147/365 (40%), Gaps = 15/365 (4%)
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
L +F L + +P + LL+ L S E + G+ + + AL+A
Sbjct: 87 LFLFSALSPRLRSRPLHAHAVSLLLRL-SSHADEAMFDALADARAAGLPASSSAFAALVA 145
Query: 188 AYC---RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
A+ R++ +AF +++ ++ +P + Y+T++KA VD+ L LY M
Sbjct: 146 AHSSAGRHADAVQAFSRMDEFQS----RPTAFVYNTILKALVDSGVILLALALYNRMVAA 201
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
PN T N+++ G K GM ++ ML+ P+V +LS N G++D
Sbjct: 202 GCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGI-MPNVKIYTVLLSSLCNAGKIDE 260
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ ++ G P+ T+N + K ++ + ++ F Y+ +I+
Sbjct: 261 AVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLID 320
Query: 365 AFSDMGDAKHMEYTF---EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+ A+ + F + M + D + +I G A AG +S + + K
Sbjct: 321 G---LFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKG 377
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
+ YN V+ DL + M + + DS T +IM K G+ D+
Sbjct: 378 FVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAM 437
Query: 482 ALEQE 486
+ E
Sbjct: 438 QIFDE 442
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 92/234 (39%), Gaps = 56/234 (23%)
Query: 109 NTVAETFSDH--VLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKV 166
NTV + DH + + ++ EML+ T M + L K G + A ++
Sbjct: 386 NTVLKVLCDHGDLERAHTLRS----EMLQNNLVLDSTTQTIM--ICGLCKRGLVDEAMQI 439
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPN---------------- 210
F+EM E G +PT Y AL+ + R ++EA + ++M+ N
Sbjct: 440 FDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCD 499
Query: 211 -----------CQ--------------------PDVYTYSTLIKACVDAMRFELIETLYQ 239
CQ PDV TY+TLI A + L++
Sbjct: 500 SESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFK 559
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
++ + ++P+ +T ++ G +A + + +L+S + P + N+++
Sbjct: 560 ELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGS-SPSLSIYNSMM 612
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/105 (20%), Positives = 46/105 (43%)
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
A G+ A + F L+ +++AG + + + Q YN ++ A + + ++
Sbjct: 130 AAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVIL 189
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
+Y RM C P+ T++++ + K+GM + E L
Sbjct: 190 LALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEML 234
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 175/435 (40%), Gaps = 59/435 (13%)
Query: 99 ERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSG 158
E + KA+ + V ET ++ W + FE +K +P Y ++ + G
Sbjct: 276 EERDKARNGLRKVIETEPEN-----WQAVVSAFERIK-----KPSRKEYGLMVNYYTRRG 325
Query: 159 QPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTY 218
AR+ F +M GIEP+ +YT L+ AY ++EA + +MK + + TY
Sbjct: 326 DMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKE-EGIEMSLVTY 384
Query: 219 STLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLE 278
S L+ E + +Q+ E+ + N + ++ Y + D+ E ++ M E
Sbjct: 385 SILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEE 444
Query: 279 SATCKP-DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
P D++ +T++ + G D +E+F+ G++P T+ LI Y K
Sbjct: 445 EGIDAPIDIY--HTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAK---L 499
Query: 338 DKMSSVMEYMRKLQFP---------------------WTSS-----------------TY 359
K+S +E ++++ W ++ Y
Sbjct: 500 GKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLY 559
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
NN+I AF MG T ++M + K T+TF +I+G+A G K + +
Sbjct: 560 NNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRM 619
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
V YNA+I ++ + + E++ M P+ T++ + YA G K
Sbjct: 620 SGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGK 679
Query: 480 VYA----LEQEKLQM 490
+ L E LQ+
Sbjct: 680 AFTYFTKLRDEGLQL 694
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 131/310 (42%), Gaps = 2/310 (0%)
Query: 166 VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC 225
VF E G+ P+ Y L+ Y + + +A +M+ + ++ TYS LI
Sbjct: 473 VFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEH-AGIKHNMKTYSMLINGF 531
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
+ + +++D+ + + P+ V N ++ + G D+ + M + KP
Sbjct: 532 LKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEM-QKQRHKPT 590
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
T I+ FA KG++ ++ R G P T+N LI +KR +K +++
Sbjct: 591 TRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILD 650
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
M TY ++ ++ +GD F ++ EG++ D T+ L+ +G
Sbjct: 651 EMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSG 710
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
++ + S I N YN +I + D+ E + ++MK + +PD T++
Sbjct: 711 RMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYT 770
Query: 466 IMTEAYAKEG 475
A +K G
Sbjct: 771 SFINACSKAG 780
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 159/369 (43%), Gaps = 8/369 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+ L VFE KE P TY L+ L K G+ A +V EM GI+ + Y+ L
Sbjct: 469 KCLLVFERFKECGL-NPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSML 527
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ + + AF + +PDV Y+ +I A + + ++M ++
Sbjct: 528 INGFLKLKDWANAFAIFEDL-IKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQR 586
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLS--GMLESATCKPDVWTMNTILSVFANKGQVD 303
P T T ++ G+ + G +M++ L M+ + C P V T N ++ K +++
Sbjct: 587 HKPTTRTFMPIIHGFARKG---EMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKME 643
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
E+ ++ G+ P T+ ++ Y K + +R TY ++
Sbjct: 644 KAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALL 703
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
+A G + ++M A+ + +T + LI+G+A G + ++ + +
Sbjct: 704 KACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQ 763
Query: 424 ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYA- 482
++ Y + I+AC KA D+ + + MK +P+ +T++ + +A+ + +K +
Sbjct: 764 PDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSC 823
Query: 483 LEQEKLQML 491
E+ KL L
Sbjct: 824 FEEMKLSGL 832
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 129/302 (42%), Gaps = 2/302 (0%)
Query: 166 VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKAC 225
+F +++++GI+P LY ++ A+C +D A T+ +M+ + +P T+ +I
Sbjct: 543 IFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRH-KPTTRTFMPIIHGF 601
Query: 226 VDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPD 285
+ ++ M P T N ++ G + ++ E++L M A P+
Sbjct: 602 ARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMT-LAGVSPN 660
Query: 286 VWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVME 345
T TI+ +A+ G ++ K R+ G+ + T+ L+ A K +V +
Sbjct: 661 EHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTK 720
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
M P + YN +I+ ++ GD +QM EG++ D T+ IN + AG
Sbjct: 721 EMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAG 780
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
+ ++ + + NV Y +I+ +A + ++ MK +PD +
Sbjct: 781 DMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYH 840
Query: 466 IM 467
+
Sbjct: 841 CL 842
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 116/273 (42%), Gaps = 38/273 (13%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL VF+M++ P TY L++ L + + E A ++ +EM G+ P YT +
Sbjct: 609 KALDVFDMMRMSGCI-PTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTI 667
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ Y +AF +++ Q DVYTY L+KAC + R + + ++M ++
Sbjct: 668 MHGYASLGDTGKAFTYFTKLRD-EGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQN 726
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ NT NI++ G+ + G + ++ M +PD+ T + ++ + G +
Sbjct: 727 IPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGV-QPDIHTYTSFINACSKAGDMQRA 785
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ E+ ++ G+ P +T+ LI + + + +K S
Sbjct: 786 TKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSC---------------------- 823
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLI 398
FE+M G+K D + CL+
Sbjct: 824 -------------FEEMKLSGLKPDRAVYHCLM 843
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 8/120 (6%)
Query: 109 NTVAETFSDHVLKKQW------FQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPEL 162
N TF ++L W ++A + + +K + QP TY + K+G +
Sbjct: 726 NIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGV-QPDIHTYTSFINACSKAGDMQR 784
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A K EM G++P + YT L+ + R SL ++A +MK L +PD Y L+
Sbjct: 785 ATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMK-LSGLKPDRAVYHCLM 843
>gi|227202654|dbj|BAH56800.1| AT2G41720 [Arabidopsis thaliana]
Length = 815
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 159/353 (45%), Gaps = 7/353 (1%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
+Q+ +AL FE++K +P T+ ++ L K GQ A +FN M E+ E P++
Sbjct: 262 RQYSKALSYFELMKGAKV-RPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDV 320
Query: 182 --YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLY 238
+T+++ Y I+ M +P++ +Y+ L+ A V M + L
Sbjct: 321 VTFTSIMHLYSVKGEIENCRAVFEAM-VAEGLKPNIVSYNALMGAYAVHGMSGTALSVL- 378
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
D+ + + P+ V+ +L YG++ + + V M+ KP+V T N ++ + +
Sbjct: 379 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFL-MMRKERRKPNVVTYNALIDAYGS 437
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
G + + + GI P + L+ A + + + +V+ + ++
Sbjct: 438 NGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAA 497
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN+ I ++ + + + ++ M + +KAD+ TF LI+G + + IS ++
Sbjct: 498 YNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 557
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
L I Y++V+ A K + E E ++ +MK C PD ++ M AY
Sbjct: 558 DLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAY 610
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 166/416 (39%), Gaps = 74/416 (17%)
Query: 131 FEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYC 190
FEM K +P TY L+ G++GQ A + ++M+ I P+ Y L+ A
Sbjct: 167 FEMQKWS--CKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACG 224
Query: 191 RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT 250
+ EA +M T PD+ T++ ++ A ++ + ++ M V P+T
Sbjct: 225 SSGNWREALEVCKKM-TDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDT 283
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLES-ATCKPDVWTMNTILSVFANKGQVDMMERWY 309
T NI++ K G Q + + M E A C+PDV T +I+ +++ KG+++ +
Sbjct: 284 TTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVF 343
Query: 310 EKFRNFGIDPETRTFNILIGAY-----------------------------------GKK 334
E G+ P ++N L+GAY G+
Sbjct: 344 EAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRS 403
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
R K V MRK + TYN +I+A+ G F QM +G+K + +
Sbjct: 404 RQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSV 463
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
C L+ + + V + + A I N + YN+ I + I A +L + +Y+ M++
Sbjct: 464 CTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRK 523
Query: 455 KHCRPDSETFSIMTE-----------------------------------AYAKEG 475
K + DS TF+I+ AY+K+G
Sbjct: 524 KKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQG 579
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 155/329 (47%), Gaps = 5/329 (1%)
Query: 150 LLVLLGKSGQPELARKVFNEM-VEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTL 208
L+ L + G EL VF M +++ ++Y ++ + R++ +D+A +M+
Sbjct: 113 LIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKW 172
Query: 209 PNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQ 268
+C+PD TY LI A A ++ L DM ++ P+ T N ++ G +G + +
Sbjct: 173 -SCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWRE 231
Query: 269 MERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILI 328
V M ++ PD+ T N +LS + + Q ++E + + P+T TFNI+I
Sbjct: 232 ALEVCKKMTDNGV-GPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIII 290
Query: 329 GAYGKKRMYDKMSSVMEYMRKLQFPWTSS--TYNNVIEAFSDMGDAKHMEYTFEQMHAEG 386
K + + MR+ + T+ +++ +S G+ ++ FE M AEG
Sbjct: 291 YCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEG 350
Query: 387 MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+K + ++ L+ YA G+ +S + + I +V Y ++++ ++ + +
Sbjct: 351 LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAK 410
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
V+ M+++ +P+ T++ + +AY G
Sbjct: 411 EVFLMMRKERRKPNVVTYNALIDAYGSNG 439
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 114/278 (41%), Gaps = 36/278 (12%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL V +K+ P +Y LL G+S QP A++VF M +E +P Y AL+
Sbjct: 374 ALSVLGDIKQNGII-PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALI 432
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
AY N + EA QM+ +P+V + TL+ AC + + ++T+ R +
Sbjct: 433 DAYGSNGFLAEAVEIFRQMEQ-DGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 491
Query: 247 TPNTVTQNIVLGGYGKAG-------MFDQMER-------VLSGMLESATCK----PDVWT 288
NT N +G Y A ++ M + V +L S +C+ P+ +
Sbjct: 492 NLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAIS 551
Query: 289 M----------------NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
+++L ++ +GQV E + + + G +P+ + ++ AY
Sbjct: 552 YLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYN 611
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
+ K ++ M S + ++ AF+ G
Sbjct: 612 ASEKWGKACELLLEMEANGIEPDSIACSALMRAFNKGG 649
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 98/243 (40%), Gaps = 38/243 (15%)
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
L+ +M + S P+ T + ++ +G+AG + ++ ML +A P T N +++
Sbjct: 165 LFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIA-PSRSTYNNLINAC 223
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
+ G +K + G+ P+ T NI++ AY R Y K S E M+ + +
Sbjct: 224 GSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDT 283
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGM--KADTKTFCCLINGYANAGLFHKVISSV 414
+T+N +I S +G + F M + + D TF +++ Y+ G
Sbjct: 284 TTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKG--------- 334
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
++ V++ M + +P+ +++ + AYA
Sbjct: 335 --------------------------EIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVH 368
Query: 475 GMN 477
GM+
Sbjct: 369 GMS 371
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 75/194 (38%), Gaps = 35/194 (18%)
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
N ++ + A VD + + + + P+ T++ LI A+G+ + ++M+ M +
Sbjct: 147 NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLR 206
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
+ STYNN+I A G+ + ++M G+ D T +++ Y + + K
Sbjct: 207 AAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSK 266
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+S L MK RPD+ TF+I+
Sbjct: 267 ALSYFEL-----------------------------------MKGAKVRPDTTTFNIIIY 291
Query: 470 AYAKEGMNDKVYAL 483
+K G + + L
Sbjct: 292 CLSKLGQSSQALDL 305
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 139/339 (41%), Gaps = 8/339 (2%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y P + L+ K G AR VF+E+ G+ P+ + L++ YCR+ ++E F
Sbjct: 222 YPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGF 281
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
V + M++ PDV+TYS LI R E L+ +M E + PN VT ++ G
Sbjct: 282 VLKSVMES-ERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDG 340
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K G D R M + +PD+ T N +++ G + + + G P
Sbjct: 341 QCKHGKIDLALRNFEIMKDRGI-RPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKP 399
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ TF L+ K D + + M + + +I G + E
Sbjct: 400 DKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERML 459
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ---IAENVSFYNAVISAC 436
+ M + G K D T+ +I+ + G V +L ++Q V YNA+++
Sbjct: 460 KDMLSAGHKPDDPTYTMVIDCFCKKG---DVKMGAKLLKEMQRDGRVPGVVTYNALMNGF 516
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
K + + + M P+ TF+I+ + + K G
Sbjct: 517 CKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHG 555
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 113/259 (43%), Gaps = 7/259 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P T+ L+ K G+ +LA + F M + GI P Y AL+ CR+ + EA
Sbjct: 329 PNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKL 388
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
LN+M +PD T++TL+ C + + M E + + V ++ G
Sbjct: 389 LNEMIG-NGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLC 447
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G ER+L ML SA KPD T ++ F KG V M + ++ + G P
Sbjct: 448 RDGRVRDAERMLKDML-SAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGV 506
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+N L+ + K+ ++ M ++ T+N +++ G + F+
Sbjct: 507 VTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSS----VDFKI 562
Query: 382 MHAE-GMKADTKTFCCLIN 399
+ E G+ +D ++ L+N
Sbjct: 563 FNGEKGLVSDYASYTALVN 581
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 113/276 (40%), Gaps = 2/276 (0%)
Query: 130 VFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAY 189
V + + E P TY L+ L K + E A +F+EM E G+ P +T L+
Sbjct: 282 VLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQ 341
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
C++ ID A MK +PD+ TY+ LI + L +M P+
Sbjct: 342 CKHGKIDLALRNFEIMKD-RGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPD 400
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
+T ++ G K G D + M+E DV ++S G+V ER
Sbjct: 401 KITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDV-AFTALISGLCRDGRVRDAERML 459
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
+ + G P+ T+ ++I + KK + +++ M++ TYN ++ F
Sbjct: 460 KDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQ 519
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
G K+ + M + + TF L++G+ G
Sbjct: 520 GQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHG 555
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 86/210 (40%)
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
P+V+ N ++ F G V +++ G+ P +FN LI Y + + ++ +
Sbjct: 224 PNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVL 283
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
M + TY+ +I + F++M G+ + TF LI+G
Sbjct: 284 KSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCK 343
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
G + + + I ++ YNA+I+ + DL E ++ M +PD T
Sbjct: 344 HGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKIT 403
Query: 464 FSIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
F+ + + K+G D ++ ++ +E
Sbjct: 404 FTTLMDGCCKDGDMDSALEIKDRMVEEGIE 433
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 150/344 (43%), Gaps = 2/344 (0%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
++P T+ LL + E A +F+++V G P YT L+ C+N ++ A
Sbjct: 148 FEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAV 207
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
NQM +P+V TY++L+ + R+ L +DM +R + PN +T ++
Sbjct: 208 EIFNQMGD-NGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDA 266
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
+ K G + + + M++ + PDV+T +++ G++D + + + G P
Sbjct: 267 FVKVGKIMEAKELYKVMIQMSV-YPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYP 325
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
T+ LI + K + + + + M + + TY +I+ + +G + F
Sbjct: 326 NEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVF 385
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
QM + D +T+ L++G G K + + K ++ N+ Y +I K
Sbjct: 386 NQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKV 445
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ + ++ + K +P+ T++ M + + G + AL
Sbjct: 446 GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADAL 489
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 3/195 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A Q+F +++ +Y P E TY L+ KS + E K+F EM ++G+ YT L
Sbjct: 310 EARQMFYLMESNGYY-PNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVL 368
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ YC D A NQM + PD+ TY+ L+ E +++ M +R
Sbjct: 369 IQGYCLVGRPDVAQEVFNQMGS-RRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKRE 427
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ N VT I++ G K G + + + KP+V T T++S F +G +
Sbjct: 428 MDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGM-KPNVITYTTMISGFCRRGFIHEA 486
Query: 306 ERWYEKFRNFGIDPE 320
+ ++K + G P
Sbjct: 487 DALFKKMKEDGFLPN 501
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 118/290 (40%), Gaps = 41/290 (14%)
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
P + ++ L+ RF+++ +L++ M ++P T NIV+ ++ +
Sbjct: 80 PSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCF 139
Query: 273 LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
L M++ +PD+ T ++L F + +++ +++ G P T+ LI
Sbjct: 140 LGKMMKLGF-EPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLC 198
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
K R N+ +E F+ MGD G++ +
Sbjct: 199 KNR----------------------HLNHAVEIFNQMGD-------------NGIRPNVV 223
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
T+ L++G G + +R K I NV + A+I A +K +ME + +YK M
Sbjct: 224 TYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVM 283
Query: 453 KEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGHWQQNI 502
+ PD T++ + G D E ++ L+E++G++ +
Sbjct: 284 IQMSVYPDVFTYTALINGLCTYGRLD-----EARQMFYLMESNGYYPNEV 328
>gi|42570403|ref|NP_850357.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330254930|gb|AEC10024.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 683
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 159/353 (45%), Gaps = 7/353 (1%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
+Q+ +AL FE++K +P T+ ++ L K GQ A +FN M E+ E P++
Sbjct: 130 RQYSKALSYFELMKGAKV-RPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDV 188
Query: 182 --YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLY 238
+T+++ Y I+ M +P++ +Y+ L+ A V M + L
Sbjct: 189 VTFTSIMHLYSVKGEIENCRAVFEAM-VAEGLKPNIVSYNALMGAYAVHGMSGTALSVL- 246
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
D+ + + P+ V+ +L YG++ + + V M+ KP+V T N ++ + +
Sbjct: 247 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFL-MMRKERRKPNVVTYNALIDAYGS 305
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
G + + + GI P + L+ A + + + +V+ + ++
Sbjct: 306 NGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAA 365
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN+ I ++ + + + ++ M + +KAD+ TF LI+G + + IS ++
Sbjct: 366 YNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 425
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
L I Y++V+ A K + E E ++ +MK C PD ++ M AY
Sbjct: 426 DLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAY 478
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 166/416 (39%), Gaps = 74/416 (17%)
Query: 131 FEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYC 190
FEM K +P TY L+ G++GQ A + ++M+ I P+ Y L+ A
Sbjct: 35 FEMQKWSC--KPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACG 92
Query: 191 RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT 250
+ EA +M T PD+ T++ ++ A ++ + ++ M V P+T
Sbjct: 93 SSGNWREALEVCKKM-TDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDT 151
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLES-ATCKPDVWTMNTILSVFANKGQVDMMERWY 309
T NI++ K G Q + + M E A C+PDV T +I+ +++ KG+++ +
Sbjct: 152 TTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVF 211
Query: 310 EKFRNFGIDPETRTFNILIGAY-----------------------------------GKK 334
E G+ P ++N L+GAY G+
Sbjct: 212 EAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRS 271
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
R K V MRK + TYN +I+A+ G F QM +G+K + +
Sbjct: 272 RQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSV 331
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
C L+ + + V + + A I N + YN+ I + I A +L + +Y+ M++
Sbjct: 332 CTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRK 391
Query: 455 KHCRPDSETFSIMTE-----------------------------------AYAKEG 475
K + DS TF+I+ AY+K+G
Sbjct: 392 KKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQG 447
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 142/298 (47%), Gaps = 4/298 (1%)
Query: 180 ELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQ 239
++Y ++ + R++ +D+A +M+ +C+PD TY LI A A ++ L
Sbjct: 12 DIYNMMIRLHARHNWVDQARGLFFEMQKW-SCKPDAETYDALINAHGRAGQWRWAMNLMD 70
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANK 299
DM ++ P+ T N ++ G +G + + V M ++ PD+ T N +LS + +
Sbjct: 71 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGV-GPDLVTHNIVLSAYKSG 129
Query: 300 GQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS-- 357
Q ++E + + P+T TFNI+I K + + MR+ +
Sbjct: 130 RQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVV 189
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
T+ +++ +S G+ ++ FE M AEG+K + ++ L+ YA G+ +S +
Sbjct: 190 TFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDI 249
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ I +V Y ++++ ++ + + V+ M+++ +P+ T++ + +AY G
Sbjct: 250 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNG 307
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 103/247 (41%), Gaps = 36/247 (14%)
Query: 127 ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
AL V +K+ P +Y LL G+S QP A++VF M +E +P Y AL+
Sbjct: 242 ALSVLGDIKQNGII-PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALI 300
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
AY N + EA QM+ +P+V + TL+ AC + + ++T+ R +
Sbjct: 301 DAYGSNGFLAEAVEIFRQMEQ-DGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 359
Query: 247 TPNTVTQNIVLGGYGKAG-------MFDQMER-------VLSGMLESATCK----PDVWT 288
NT N +G Y A ++ M + V +L S +C+ P+ +
Sbjct: 360 NLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAIS 419
Query: 289 M----------------NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
+++L ++ +GQV E + + + G +P+ + ++ AY
Sbjct: 420 YLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYN 479
Query: 333 KKRMYDK 339
+ K
Sbjct: 480 ASEKWGK 486
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 111/275 (40%), Gaps = 38/275 (13%)
Query: 160 PELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYS 219
PE A EM + I T E+Y+++L AY + + EA NQMK + C+PDV Y+
Sbjct: 415 PE-AISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMK-MAGCEPDVIAYT 472
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES 279
+++ A + ++ L+ +M+ + P+++ + ++ + K G + ++ M E
Sbjct: 473 SMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMRE- 531
Query: 280 ATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDK 339
K +T +F+ + ++ W KR D
Sbjct: 532 ---KEIPFTGAVFFEIFS---ACNTLQEW-------------------------KRAIDL 560
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+ + Y+ L T N ++ F G + M F ++ A G+ + KT+ L+
Sbjct: 561 IQMMDPYLPSLSIGLT----NQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLE 616
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVIS 434
G + K I + S I + Y +IS
Sbjct: 617 HLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS 651
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 98/243 (40%), Gaps = 38/243 (15%)
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
L+ +M + S P+ T + ++ +G+AG + ++ ML +A P T N +++
Sbjct: 33 LFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIA-PSRSTYNNLINAC 91
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
+ G +K + G+ P+ T NI++ AY R Y K S E M+ + +
Sbjct: 92 GSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDT 151
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEG--MKADTKTFCCLINGYANAGLFHKVISSV 414
+T+N +I S +G + F M + + D TF +++ Y+ G
Sbjct: 152 TTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKG--------- 202
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
++ V++ M + +P+ +++ + AYA
Sbjct: 203 --------------------------EIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVH 236
Query: 475 GMN 477
GM+
Sbjct: 237 GMS 239
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 75/194 (38%), Gaps = 35/194 (18%)
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
N ++ + A VD + + + + P+ T++ LI A+G+ + ++M+ M +
Sbjct: 15 NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLR 74
Query: 350 LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHK 409
+ STYNN+I A G+ + ++M G+ D T +++ Y + + K
Sbjct: 75 AAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSK 134
Query: 410 VISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTE 469
+S L MK RPD+ TF+I+
Sbjct: 135 ALSYFEL-----------------------------------MKGAKVRPDTTTFNIIIY 159
Query: 470 AYAKEGMNDKVYAL 483
+K G + + L
Sbjct: 160 CLSKLGQSSQALDL 173
>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
Length = 812
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 157/398 (39%), Gaps = 54/398 (13%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L K G A K+F+EM++ GI P ++YT LL++ C IDEA
Sbjct: 205 PNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQL 264
Query: 202 LNQMKTLPNCQPDVYT-----------------------------------YSTLIKACV 226
L MK C PD T YS LI
Sbjct: 265 LGSMKD-KGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLF 323
Query: 227 DAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDV 286
A RF+ Y+ M ER+++P+ V I++ G +AG + L M + PD
Sbjct: 324 QARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFV-PDT 382
Query: 287 WTMNTILSVFANKGQVDMMERWYEKF--RNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
+ NT+L V + G ++ + N +D T+T I+I K+ + D+ +
Sbjct: 383 FCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQT--IMICGLCKRGLVDEAMQIF 440
Query: 345 EYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH-------------AEGMKADT 391
+ M + T TYN +I+ F G + F +M D+
Sbjct: 441 DEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDS 500
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
++ L++ +G K +R + +V YN +I+ KA +L R++K
Sbjct: 501 ESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKE 560
Query: 452 MKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
++ K PD T+ + + + + L Q LQ
Sbjct: 561 LQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQ 598
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 132/319 (41%), Gaps = 14/319 (4%)
Query: 174 GIEPTPELYTALLAAYC---RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMR 230
G+ + + AL+AA+ RN+ +AF +++ ++ +P + Y+T++KA VD+
Sbjct: 132 GLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQS----RPTAFVYNTILKALVDSGV 187
Query: 231 FELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMN 290
L LY M PN T N+++ G K GM ++ ML+ P+V
Sbjct: 188 ILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGI-MPNVKIYT 246
Query: 291 TILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
+LS N G++D + ++ G P+ T+N + K ++ + ++
Sbjct: 247 VLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDG 306
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTF---EQMHAEGMKADTKTFCCLINGYANAGLF 407
F Y+ +I+ + A+ + F + M + D + +I G A AG
Sbjct: 307 GFALGLKGYSCLIDG---LFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRI 363
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+S + + K + YN V+ DL + M + + DS T +IM
Sbjct: 364 EDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIM 423
Query: 468 TEAYAKEGMNDKVYALEQE 486
K G+ D+ + E
Sbjct: 424 ICGLCKRGLVDEAMQIFDE 442
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 134/334 (40%), Gaps = 41/334 (12%)
Query: 157 SGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVY 216
+G+ A + F+ M E PT +Y +L A + +I A N+M C P+
Sbjct: 150 AGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRM-VAAGCAPNRA 208
Query: 217 TYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
TY+ L+ C M + ++ ++ +M +R + PN ++L AG D+ ++L G
Sbjct: 209 TYNVLMDGLCKQGMAGDALK-MFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLL-G 266
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVD-----------------------MMERWYEKF 312
++ C PD T N LS G+V+ +++ ++
Sbjct: 267 SMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQAR 326
Query: 313 R---NFG---------IDPETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTY 359
R FG I P+ + I+I G R+ D + S ++ M+K F + Y
Sbjct: 327 RFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDAL-SFLDVMKKKGFVPDTFCY 385
Query: 360 NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASK 419
N V++ D GD + +M + D+ T +I G GL + + +
Sbjct: 386 NTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGE 445
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
V YNA+I + L E ++ +M+
Sbjct: 446 HGCDPTVMTYNALIDGFYREGRLEEARMLFHKME 479
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 70/179 (39%), Gaps = 4/179 (2%)
Query: 313 RNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
R G+ + F L+ A+ M + Q T+ YN +++A D G
Sbjct: 129 RAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVI 188
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAV 432
+ +M A G + T+ L++G G+ + I NV Y +
Sbjct: 189 LLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVL 248
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQML 491
+S+ A + E ++ MK+K C PD T++ K G ++ + ++L ML
Sbjct: 249 LSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAF----QRLVML 303
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 92/234 (39%), Gaps = 56/234 (23%)
Query: 109 NTVAETFSDH--VLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKV 166
NTV + DH + + ++ EML+ T M + L K G + A ++
Sbjct: 386 NTVLKVLCDHGDLERAHTLRS----EMLQNNLVLDSTTQTIM--ICGLCKRGLVDEAMQI 439
Query: 167 FNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPN---------------- 210
F+EM E G +PT Y AL+ + R ++EA + ++M+ N
Sbjct: 440 FDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCD 499
Query: 211 -----------CQ--------------------PDVYTYSTLIKACVDAMRFELIETLYQ 239
CQ PDV TY+TLI A + L++
Sbjct: 500 SESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFK 559
Query: 240 DMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTIL 293
++ + ++P+ +T ++ G +A + + +L+S + P + N+++
Sbjct: 560 ELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGS-SPSLSIYNSMM 612
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 150/357 (42%), Gaps = 8/357 (2%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
+Q ++ L EM K P TY ++ + SG + A + EM+ G P +
Sbjct: 399 RQGYELL--VEMKKRNIVISPY--TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVI 454
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
YT L+ + +NS +A L +MK PD++ Y++LI A R + + +M
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLKEMKE-QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
E + PN T + GY +A F ++ + M E P+ +++ + K +
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL-PNKVLCTGLINEYCKKEK 572
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
V Y + GI + +T+ +L+ K D + MR +Y
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+I FS +G+ + F++M EG+ + + L+ G+ +G K + S
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ N Y +I K+ DL E R++ MK K PDS ++ + + + +ND
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR--LND 747
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 144/359 (40%), Gaps = 35/359 (9%)
Query: 151 LVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMK---- 206
+ ++ K G E A+ +F+ M+ G+ P + Y +L+ YCR + + + L +MK
Sbjct: 354 ICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNI 413
Query: 207 ------------------------------TLPNCQPDVYTYSTLIKACVDAMRFELIET 236
C+P+V Y+TLIK + RF
Sbjct: 414 VISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMR 473
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
+ ++M E+ + P+ N ++ G KA D+ L M+E+ KP+ +T +S +
Sbjct: 474 VLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL-KPNAFTYGAFISGY 532
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
+ +++ ++ R G+ P LI Y KK + S M +
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDA 592
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
TY ++ E F +M +G+ D ++ LING++ G K S
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + NV YN ++ ++ ++ + + + M K P++ T+ + + Y K G
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG 711
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 146/333 (43%), Gaps = 16/333 (4%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P +Y L+ K G + A +F+EMVEEG+ P +Y LL +CR+ I++A
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L++M ++ P+ TY T+I + L+ +M + + P++ ++ G
Sbjct: 685 LDEM-SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743
Query: 262 KAGMFDQMERVLSGM-LESATCKPDVWTMNTILSVFANKGQVDM----MERWYE-KFRNF 315
+ + +ER ++ C N +++ G+ ++ + R + F F
Sbjct: 744 R---LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRF 800
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHM 375
G P T+NI+I K+ + + M+ T TY +++ + MG M
Sbjct: 801 G-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859
Query: 376 EYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV-RLASKLQIAE----NVSFYN 430
F++ A G++ D + +IN + G+ K + V ++ +K + + ++S
Sbjct: 860 FPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCR 919
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
A++S K ++ E+V + M PDS T
Sbjct: 920 ALLSGFAKVGEMEVAEKVMENMVRLQYIPDSAT 952
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 144/337 (42%), Gaps = 31/337 (9%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A + MV++GI + YT L+ +N +D+A +M+ PDV++Y LI
Sbjct: 576 ACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG-KGIAPDVFSYGVLI 634
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
+ +++ +M E +TPN + N++LGG+ ++G ++ + +L M
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM-SVKGL 693
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
P+ T TI+ + G + R +++ + G+ P++ + L+ G R+ D +
Sbjct: 694 HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD--GCCRLNDVERA 751
Query: 343 VMEY-MRKLQFPWTSSTYNNVIEAFSDMGDA--------KHMEYTFEQMHAEGMKADTKT 393
+ + K +++ +N +I G + M+ +F++ K + T
Sbjct: 752 ITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG----KPNDVT 807
Query: 394 FCCLINGYANAG-------LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEME 446
+ +I+ G LFH++ ++ + V Y ++++ K EM
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNA-------NLMPTVITYTSLLNGYDKMGRRAEMF 860
Query: 447 RVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
V+ PD +S++ A+ KEGM K L
Sbjct: 861 PVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVL 897
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 140/343 (40%), Gaps = 23/343 (6%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLI----DEAF------ 199
LL L + + +L V+ MVE + + Y L+ A+CR + D F
Sbjct: 192 LLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEF 251
Query: 200 --VTLN-----QMKTLPNCQ---PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
TLN ++K C+ P YTY LI R E ++L +MD V+ +
Sbjct: 252 RTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLD 311
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESA-TCKPDVWTMNTILSVFANKGQVDMMERW 308
T ++++ G K D + ++ M+ KP + + + V + +G ++ +
Sbjct: 312 NHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKP--YMYDCCICVMSKEGVMEKAKAL 369
Query: 309 YEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSD 368
++ G+ P+ + + LI Y +++ + ++ M+K + TY V++
Sbjct: 370 FDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCS 429
Query: 369 MGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSF 428
GD ++M A G + + + LI + F + ++ + IA ++
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
YN++I KA + E M E +P++ T+ Y
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/330 (19%), Positives = 123/330 (37%), Gaps = 22/330 (6%)
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
L+ L Y I+EA + L P + L+ A + R +L +Y+
Sbjct: 153 LFGILFDGYIAKGYIEEAVFVFSSSMGL-ELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL--------------SGML---ESATCK 283
M ER+V + T ++++ + +AG + VL G L ES CK
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271
Query: 284 ---PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKM 340
P +T + ++ +++ + + + G+ + T+++LI K R D
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 341 SSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLING 400
++ M Y+ I S G + + F+ M A G+ + + LI G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 401 YANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
Y + + K I + Y V+ + DL + K M CRP+
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 461 SETFSIMTEAYAKEG-MNDKVYALEQEKLQ 489
++ + + + + D + L++ K Q
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ 481
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 6/144 (4%)
Query: 139 FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA 198
F +P + TY ++ L K G E A+++F++M + PT YT+LL Y + E
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859
Query: 199 FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI--- 255
F ++ +PD YS +I A + L M ++ + +I
Sbjct: 860 FPVFDE-AIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTC 918
Query: 256 --VLGGYGKAGMFDQMERVLSGML 277
+L G+ K G + E+V+ M+
Sbjct: 919 RALLSGFAKVGEMEVAEKVMENMV 942
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 163/372 (43%), Gaps = 40/372 (10%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY+ LL G SG + +V+N MV +G YTA++ A C+ +DEA
Sbjct: 308 KPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALA 367
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
++MK P+ Y+Y++LI + A F+ L+ M+ +PN T + + Y
Sbjct: 368 VFDEMKE-KGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYY 426
Query: 261 GKAGM-FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
GK+G ++R ++S PDV N +L A G++ M +R + + + G+ P
Sbjct: 427 GKSGQSLKAIQRYEH--MKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSP 484
Query: 320 ETRTFNILIGAYGKKRMYDK-------------------MSSVMEYMRK----------- 349
+T T+ ++I K D+ ++S+++ + K
Sbjct: 485 DTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLF 544
Query: 350 -----LQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANA 404
++ T+ TYN ++ G K + E+M + T+ +++ +
Sbjct: 545 HKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKN 604
Query: 405 GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
G + I + ++ A ++S YN V+ IK + L E R++ +MK K PD T
Sbjct: 605 GEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMK-KILAPDYATL 663
Query: 465 SIMTEAYAKEGM 476
+ ++ K G+
Sbjct: 664 CTILPSFVKNGL 675
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 152/336 (45%), Gaps = 6/336 (1%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY L+ L KSG A +V+ MVE+GI P+ Y+ L+ A+ + +D LN+M
Sbjct: 173 TYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEM 232
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ +P+VY+Y+ I+ A RF+ + M++ P+ VT +++ AG
Sbjct: 233 EA-RGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGR 291
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
+ V M +++ KPD T T+L + G + + G + ++
Sbjct: 292 LSDAKAVFWKM-KASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYT 350
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF--SDMGDAKHMEYTFEQMH 383
++ A + D+ +V + M++ +YN++I F +DM D + +E F M+
Sbjct: 351 AVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFD-RALE-LFNHMN 408
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
A G + T IN Y +G K I I +V+ NAV+ + + L
Sbjct: 409 ACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLG 468
Query: 444 EMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
+RV+ +K PD+ T+++M + +K D+
Sbjct: 469 MAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADE 504
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 157/380 (41%), Gaps = 5/380 (1%)
Query: 118 HVLKKQWF--QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGI 175
+ L K F +A++V++ + E P TY L+V GK + + NEM G+
Sbjct: 179 YFLVKSGFDAEAMEVYKAMVEDGI-SPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGV 237
Query: 176 EPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIE 235
+P YT + + + DEA+ L +M+ C+PDV T++ +I+ DA R +
Sbjct: 238 KPNVYSYTICIRVLGQAARFDEAYHILGKMED-SGCKPDVVTHTVIIQVLCDAGRLSDAK 296
Query: 236 TLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSV 295
++ M P+ VT +L G +G + V + M+ ++ + ++
Sbjct: 297 AVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGY-NDNIVSYTAVVDA 355
Query: 296 FANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWT 355
G+VD +++ + G+ PE ++N LI + K M+D+ + +M
Sbjct: 356 LCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPN 415
Query: 356 SSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVR 415
T+ I + G + +E M ++G+ D ++ A +G
Sbjct: 416 GYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFY 475
Query: 416 LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ ++ + Y +I C KA E + M E C PD + + + K G
Sbjct: 476 ELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGG 535
Query: 476 MNDKVYALEQEKLQMLLEAS 495
++ + L + +M +E +
Sbjct: 536 KGNEAWQLFHKLKEMKIEPT 555
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 134/320 (41%), Gaps = 2/320 (0%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A ++FN+ G+ Y +L+ +LID A +MK L C PD +TY+ ++
Sbjct: 750 AHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRL-GCGPDEFTYNLIL 808
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
A +MR E + + ++M + VT N ++ G K+ +Q + ++ S
Sbjct: 809 DAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLM-SEGF 867
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
P T +L G++ E + + +G +P +NIL+ + + +
Sbjct: 868 SPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQ 927
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+ E M + +Y +I+ G F Q+H G++ D + LI+G
Sbjct: 928 LFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLG 987
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
+ + +S K I N+ YN++I KA E ++Y+ + K +P
Sbjct: 988 KSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVF 1047
Query: 463 TFSIMTEAYAKEGMNDKVYA 482
T++ + Y+ G D YA
Sbjct: 1048 TYNALIRGYSVSGSTDNAYA 1067
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 120/265 (45%), Gaps = 4/265 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF-V 200
P E TY +L +GKS + E KV EM +G E T Y +++ ++ +++A +
Sbjct: 799 PDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDL 858
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
N M P TY L+ + + + E L+ +M E PN NI+L G+
Sbjct: 859 YYNLMSE--GFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGH 916
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
AG + + ++ M+E PD+ + ++ G+++ ++ + G++P+
Sbjct: 917 RIAGNTENVCQLFEKMVEQGI-NPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPD 975
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
+N+LI GK ++ S+ M+K TYN++I G A +E
Sbjct: 976 LIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYE 1035
Query: 381 QMHAEGMKADTKTFCCLINGYANAG 405
++ +G K T+ LI GY+ +G
Sbjct: 1036 ELLRKGWKPSVFTYNALIRGYSVSG 1060
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 79/443 (17%), Positives = 159/443 (35%), Gaps = 107/443 (24%)
Query: 129 QVFEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP--------- 177
+V ++L+E + Y P TY +L L K+G+ A + M E+G P
Sbjct: 574 EVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVM 633
Query: 178 -----------------------TPELYT--ALLAAYCRNSLIDEAFVTLNQMKTLPNCQ 212
P+ T +L ++ +N L+ EA T+ + C
Sbjct: 634 YGLIKEERLEEAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCN 693
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN----------------------- 249
D ++ +L++ + E +++ R + N
Sbjct: 694 VDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQL 753
Query: 250 ------------TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFA 297
T + N ++ G + D E + + M + C PD +T N IL
Sbjct: 754 FNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEM-KRLGCGPDEFTYNLILDAMG 812
Query: 298 NKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS 357
+V+ M + ++ G + T+N +I K + ++ + + F T
Sbjct: 813 KSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPC 872
Query: 358 TYNNVIEA-------------FSDM----------------------GDAKHMEYTFEQM 382
TY +++ F++M G+ +++ FE+M
Sbjct: 873 TYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKM 932
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
+G+ D K++ LI+ AG + + R +L + ++ YN +I K++ +
Sbjct: 933 VEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERI 992
Query: 443 MEMERVYKRMKEKHCRPDSETFS 465
E ++ MK+K P+ T++
Sbjct: 993 EEAVSLFNEMKKKGIIPNLYTYN 1015
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 73/187 (39%), Gaps = 2/187 (1%)
Query: 290 NTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
N +L + G+V M + ++ + + TF + G G + + MR+
Sbjct: 105 NYMLELMRAHGRVGDMAQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMRE 164
Query: 350 LQFPWTSSTYNNVIEAFSDMG-DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
+ TYN +I G DA+ ME ++ M +G+ +T+ L+ +
Sbjct: 165 AGMSLNAYTYNGLIYFLVKSGFDAEAME-VYKAMVEDGISPSVRTYSVLMVAFGKKRDVD 223
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
V+ + + NV Y I +A E + +M++ C+PD T +++
Sbjct: 224 TVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVII 283
Query: 469 EAYAKEG 475
+ G
Sbjct: 284 QVLCDAG 290
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 5/142 (3%)
Query: 355 TSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSV 414
T+ + N ++E G M F+ M + +K + TF + G G ++
Sbjct: 100 TTESCNYMLELMRAHGRVGDMAQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVAL 159
Query: 415 RLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
+ + ++ N YN +I +K+ E VYK M E P T+S++ A+ K+
Sbjct: 160 PVMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKK 219
Query: 475 GMNDKVYALEQEKLQMLLEASG 496
D V L E +EA G
Sbjct: 220 RDVDTVLWLLNE-----MEARG 236
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 172/433 (39%), Gaps = 74/433 (17%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
K+ W +A+++ L ++ E TY L++ L K + E+ V +EM+E G PT
Sbjct: 275 KRVW-EAVEIKNGLIQKGL-TASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEA 332
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQD 240
++L+ R + +AF +N++K + P ++ Y+ LI + +F+ E L+++
Sbjct: 333 ALSSLVEGLRRKGKVVDAFDLVNRVKKV-GAMPSLFVYNALINSLCKDGKFDEAELLFKE 391
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT--------------CK--- 283
M E+ + N VT +I++ + + G D L M+ + CK
Sbjct: 392 MGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGN 451
Query: 284 -----------------PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNI 326
P V + +++S + NKG++ R Y + GI P T TF
Sbjct: 452 LSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTT 511
Query: 327 LIGA-YGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
LI A + RM D E + + P TYN +IE G+ QM +
Sbjct: 512 LISALFRANRMTDAFRLFDEMLEQNMMP-NEVTYNVMIEGHCKEGNTVKAFELLNQMVQK 570
Query: 386 GMKADTKTF------------CC-----------------------LINGYANAGLFHKV 410
G+ DT T+ C L++GY G
Sbjct: 571 GLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDA 630
Query: 411 ISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEA 470
+ R K + ++ Y +I IK D + + K M ++ RPD ++ M +
Sbjct: 631 LGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDG 690
Query: 471 YAKEGMNDKVYAL 483
Y+K G K + +
Sbjct: 691 YSKAGSVKKAFGI 703
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 182/407 (44%), Gaps = 40/407 (9%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
+V +K+ F ++ +F ++++ P+ T ++L L K + ++ +F E++ GI P
Sbjct: 168 YVQEKRMFDSVLIFRLMRQCEL-MPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRP 226
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIET 236
+Y A++ ++C +A + +M++ +V Y+ LI C + +E +E
Sbjct: 227 DIYIYVAVIRSFCELKNFAKAKEMIQRMES---SDLNVVVYNVLIHGLCKNKRVWEAVE- 282
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGK-------AGMFDQM--------ERVLSGMLESAT 281
+ + ++ +T + VT ++ G K AG+ D+M E LS ++E
Sbjct: 283 IKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLR 342
Query: 282 CK-------------------PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETR 322
K P ++ N +++ G+ D E +++ G+
Sbjct: 343 RKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDV 402
Query: 323 TFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM 382
T++ILI ++ ++ D + M T YN++I +G+ F++M
Sbjct: 403 TYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEM 462
Query: 383 HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDL 442
+G+K ++ LI+GY N G H+ + IA N + +ISA +A+ +
Sbjct: 463 IDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRM 522
Query: 443 MEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+ R++ M E++ P+ T+++M E + KEG K + L + +Q
Sbjct: 523 TDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQ 569
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 143/334 (42%), Gaps = 39/334 (11%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
K G A F+EM+++G++PT YT+L++ YC + EAF ++M T P+
Sbjct: 448 KLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEM-TGKGIAPNT 506
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
YT++TLI A A R L+ +M E+++ PN VT N+++ G+ K G + +L+
Sbjct: 507 YTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQ 566
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKK- 334
M++ PD +T ++S + G+V +++ + ++ L+ Y K+
Sbjct: 567 MVQKGLV-PDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEG 625
Query: 335 RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTF 394
R+ D + E M K Y +I+ D + + MH + ++ D +
Sbjct: 626 RLRDALGVCRE-MVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIY 684
Query: 395 CCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKE 454
+I+GY+ AG K ++ M +
Sbjct: 685 TSMIDGYSKAGSVKKAFG-----------------------------------IWDIMID 709
Query: 455 KHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
+ C P+ T++ + K G+ DK L +E L
Sbjct: 710 EGCTPNIVTYTTLINELCKAGLMDKAELLWKEML 743
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 107/218 (49%), Gaps = 9/218 (4%)
Query: 117 DHVLKKQWFQALQVFEMLK--EQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG 174
D +K+Q A VF +LK +P + Y ++ K+G + A +++ M++EG
Sbjct: 654 DGTIKEQDTSA--VFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEG 711
Query: 175 IEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELI 234
P YT L+ C+ L+D+A + +M + N P+ TY + E
Sbjct: 712 CTPNIVTYTTLINELCKAGLMDKAELLWKEM-LVSNSTPNHVTYCCFLDHLAREGSMEKA 770
Query: 235 ETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILS 294
L+ DM + + NTV+ NI++ G+ K G ++ ++L M+++A PD T +TI+
Sbjct: 771 VQLHNDM-LKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAI-FPDCITYSTIIY 828
Query: 295 VFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
+G +D +++ N G+ P+T +N LI YG
Sbjct: 829 QCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLI--YG 864
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 124/316 (39%), Gaps = 38/316 (12%)
Query: 126 QALQVFEMLKE--QPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
++ FE+L + Q P TY L+ L +G+ A+K +++ E + Y+
Sbjct: 556 NTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYS 615
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
ALL YC+ + +A +M D+ Y+ LI + + L ++M +
Sbjct: 616 ALLHGYCKEGRLRDALGVCREMVK-RGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHD 674
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+ + P+ V ++ GY KAG + + M++ C P++ T T+++ G +D
Sbjct: 675 QRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEG-CTPNIVTYTTLINELCKAGLMD 733
Query: 304 MMER-WYEKFRNF---------------------------------GIDPETRTFNILIG 329
E W E + G+ T ++NIL+
Sbjct: 734 KAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVSYNILVR 793
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+ K ++ + +++ M TY+ +I G+ ++ M +G+K
Sbjct: 794 GFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKP 853
Query: 390 DTKTFCCLINGYANAG 405
DT + LI G AG
Sbjct: 854 DTLAYNFLIYGCCIAG 869
>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 159/398 (39%), Gaps = 39/398 (9%)
Query: 94 LKKKLERKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQ--PKEGTYMKLL 151
+KK L + +N+ VL KQ Q + + KE Q P T+ L+
Sbjct: 127 VKKLLAEVQGKEVRINSFVYNNLLSVLVKQN-QVHEAIYLFKEYLVMQSPPDTWTFNILI 185
Query: 152 VLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNC 211
L + G + A +VF +M G P Y L+ C+ + + ++++ +C
Sbjct: 186 RGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDC 245
Query: 212 QPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMER 271
PD+ TY+++I + + + L+++M + PN +T N+++ G+GK G + E
Sbjct: 246 SPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEA 305
Query: 272 VLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
+ M C DV T +++ + GQV+ +++ + + P T+ +LI A
Sbjct: 306 MYRKM-AYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINAL 364
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
K+ ++ + ++ YN VI+ F G+ ++M + D
Sbjct: 365 CKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDK 424
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
TF LI G+ C+K + E ++ R
Sbjct: 425 VTFTILIIGH----------------------------------CVKG-RMFEAINIFNR 449
Query: 452 MKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
M C PD+ T + + K GM ++ Y + + L+
Sbjct: 450 MLATRCAPDNITVNSLISCLLKAGMPNEAYRIRKMALE 487
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 136/326 (41%), Gaps = 1/326 (0%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
L+ + ++ ++ +K+ E+ + + +Y LL+ + + + EA + +
Sbjct: 114 LVTWMAQASDFDMVKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQ 173
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
+ PD +T++ LI+ + +++DM+ P+ VT N ++ G KA +
Sbjct: 174 S-PPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRG 232
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+ + + C PD+ T +I+S F G++ +E+ GI P TFN+LI
Sbjct: 233 CELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLID 292
Query: 330 AYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKA 389
+GK + ++ M T+ ++I+ + G H + M +
Sbjct: 293 GFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSP 352
Query: 390 DTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVY 449
T+ LIN ++ + I YN VI KA ++ E +
Sbjct: 353 TVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVIL 412
Query: 450 KRMKEKHCRPDSETFSIMTEAYAKEG 475
K M+EK C PD TF+I+ + +G
Sbjct: 413 KEMEEKRCDPDKVTFTILIIGHCVKG 438
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/260 (18%), Positives = 102/260 (39%), Gaps = 37/260 (14%)
Query: 217 TYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGM 276
TY+ L+++ +L+ ++ M P++ ++ +A FD ++++L+
Sbjct: 75 TYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAE- 133
Query: 277 LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRM 336
++ + + + N +LSV + QV ++++ P+T TFNIL
Sbjct: 134 VQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNIL--------- 184
Query: 337 YDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCC 396
I +G F+ M + G D T+
Sbjct: 185 --------------------------IRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNT 218
Query: 397 LINGYANAGLFHKVISSVR-LASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
LING A + + + S+ + ++ Y ++IS K+ + E +++ M
Sbjct: 219 LINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRS 278
Query: 456 HCRPDSETFSIMTEAYAKEG 475
+P+ TF+++ + + K G
Sbjct: 279 GIQPNVITFNVLIDGFGKIG 298
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%)
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRL 416
STYN ++ + MG + F+ M ++G D+K L+ A A F V +
Sbjct: 74 STYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAE 133
Query: 417 ASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGM 476
++ N YN ++S +K + + E ++K PD+ TF+I+ + G
Sbjct: 134 VQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGG 193
Query: 477 NDKVY 481
D+ +
Sbjct: 194 VDRAF 198
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 162/378 (42%), Gaps = 16/378 (4%)
Query: 132 EMLKEQPFY----QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLA 187
EML + Y +P +Y ++ L K + + AR +F EM +G+ PT YT+L+
Sbjct: 226 EMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIH 285
Query: 188 AYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVT 247
+C +EA N+M QP+V T++ LI + + L + M +R +
Sbjct: 286 GFCCGGKWEEAKRLFNEMVN-QGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIV 344
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMER 307
PN +T N ++ G+ G + + M S C+PDV +++ + +V+ +
Sbjct: 345 PNLLTYNSLIEGFCLVGDLNSARELFVSM-PSKGCEPDVICYTVLINGYCKTSKVEEAMK 403
Query: 308 WYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFS 367
Y G P+ +T+ L+ + + M+ P Y +
Sbjct: 404 LYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLC 463
Query: 368 DMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL---QIAE 424
G F ++ + +K D + F CLI+G AG K+ ++ L KL ++
Sbjct: 464 KNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAG---KLETAWELFEKLPQEELQP 520
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALE 484
+V YN +I + +++ ++++M++ C PD T++ + + + +KV
Sbjct: 521 DVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVV--- 577
Query: 485 QEKLQMLLEASGHWQQNI 502
E L M+++ NI
Sbjct: 578 -ELLHMMVQRDVSLDVNI 594
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 155/354 (43%), Gaps = 14/354 (3%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEE----GIEPTPEL--YTALLAAYCRNSLI 195
P TY L+ L ++G +A K+ EM+ + GI P + Y+ ++ A C++
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258
Query: 196 DEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI 255
DEA +MK + P V +Y++LI ++E + L+ +M + V PN VT N+
Sbjct: 259 DEARDLFEEMK-VQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNV 317
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNF 315
++ K G + + +L M++ P++ T N+++ F G ++ + +
Sbjct: 318 LIDVLCKEGKVIEAKDLLEVMIQRGIV-PNLLTYNSLIEGFCLVGDLNSARELFVSMPSK 376
Query: 316 GIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF---SDMGDA 372
G +P+ + +LI Y K ++ + M ++ TY ++ +GDA
Sbjct: 377 GCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDA 436
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAV 432
K + F M G+ D + +NG G + + I ++ +N +
Sbjct: 437 KKL---FGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCL 493
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
I KA L +++++ ++ +PD T++IM + + G K L Q+
Sbjct: 494 IDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQK 547
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 134/325 (41%), Gaps = 16/325 (4%)
Query: 177 PTPEL--YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELI 234
PTP L +T LL+ + + F NQM+ L PD T + L+ + R
Sbjct: 92 PTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMR-LSGISPDCCTLNILLNCLCNVNRVGEG 150
Query: 235 ETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILS 294
+ + R P+ VT ++ G + + + M + C P+ T T++
Sbjct: 151 LAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRM-QKLGCTPNAITYGTLMK 209
Query: 295 VFANKGQVDMMERWYEKFRN----FGID--PETRTFNILIGAYGKKRMYDKMSSVMEYMR 348
G + + + +++ N +GI+ P +++I+I A K R D+ + E M+
Sbjct: 210 GLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMK 269
Query: 349 KLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH 408
T +Y ++I F G + + F +M +G++ + TF LI+ G
Sbjct: 270 VQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEG--- 326
Query: 409 KVISSVRLASKL---QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
KVI + L + I N+ YN++I DL ++ M K C PD ++
Sbjct: 327 KVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYT 386
Query: 466 IMTEAYAKEGMNDKVYALEQEKLQM 490
++ Y K ++ L LQ+
Sbjct: 387 VLINGYCKTSKVEEAMKLYNGMLQV 411
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 126/306 (41%), Gaps = 3/306 (0%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W +A ++F + Q QP T+ L+ +L K G+ A+ + M++ GI P Y
Sbjct: 292 KWEEAKRLFNEMVNQGV-QPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTY 350
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
+L+ +C ++ A M + C+PDV Y+ LI + E LY M
Sbjct: 351 NSLIEGFCLVGDLNSARELFVSMPS-KGCEPDVICYTVLINGYCKTSKVEEAMKLYNGML 409
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
+ P+ T +L G + G ++ L G+++ D++ L+ G +
Sbjct: 410 QVGKRPDVKTYGALLTGLFQGGKVGDAKK-LFGVMKVYGIPGDLYIYGIFLNGLCKNGCL 468
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ K +++ I + FN LI K + + E + + + TYN +
Sbjct: 469 FEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIM 528
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I F G F++M G D T+ LI G+ + KV+ + + + +
Sbjct: 529 IHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDV 588
Query: 423 AENVSF 428
+ +V+
Sbjct: 589 SLDVNI 594
>gi|224090111|ref|XP_002308939.1| predicted protein [Populus trichocarpa]
gi|222854915|gb|EEE92462.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/451 (21%), Positives = 170/451 (37%), Gaps = 67/451 (14%)
Query: 100 RKAKAKAWVNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQ 159
+K + K T + H QW A+ + E + ++ P TY L+ G SG
Sbjct: 162 QKWRCKPDAETCNALINAHGRSGQWRWAMNIMEDMLQKAI-PPSRSTYNNLINACGSSGN 220
Query: 160 PELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYS 219
A K+ +M E G+ P + +L+AY + +A MK N +PD T +
Sbjct: 221 WREALKLCKKMTENGVGPDLVTHNIILSAYKTGAQYAKALSYFELMKG-TNIRPDTTTLN 279
Query: 220 TLIKACVDAMRFELIETLYQDMDERSVT--PNTVTQNIVLGGYGKAGMFDQMERVLSGML 277
+I ++E +++ M E+ P+ VT ++ Y G + V S M+
Sbjct: 280 IIIYCLTKLGQYEKAIGIFKSMREKRAECHPDVVTFTSIIHLYSVNGQIENCRAVFSTMV 339
Query: 278 ESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMY 337
KP++ + NT++ +A+ G + +N G+ P+ ++ L+ +YG+ +
Sbjct: 340 AEGL-KPNIVSYNTLMGAYASHGMNKEALSVFNAIKNSGLRPDVVSYTSLLNSYGRSQQP 398
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
K V E M++ + +YN +I+A+ G +M +G+ + + C L
Sbjct: 399 KKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQDGIYPNAVSICTL 458
Query: 398 -----------------------------------INGYANAGLFHKVISSVRLASKLQI 422
I Y N G F K S R K ++
Sbjct: 459 LAACGRCSRKVNIDVVLQAAERRHIKLNTIAYNSAIGSYMNVGEFEKATSMYRSMRKSKV 518
Query: 423 AENVSFYNAVISACIK---------------------------ADDLMEMERVYKRMKEK 455
+ + +IS C K + + E E ++ +MK
Sbjct: 519 IPDAVTFTVLISGCCKMTKYCEALEFLSEMMDLKIPMTKEAYSSGKITEAESMFNKMKMA 578
Query: 456 HCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
C PD T+++M AY K AL QE
Sbjct: 579 GCSPDVVTYTMMLHAYNAAEHWKKACALLQE 609
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 159/354 (44%), Gaps = 4/354 (1%)
Query: 131 FEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYC 190
FEM K + +P T L+ G+SGQ A + +M+++ I P+ Y L+ A
Sbjct: 159 FEMQKWRC--KPDAETCNALINAHGRSGQWRWAMNIMEDMLQKAIPPSRSTYNNLINACG 216
Query: 191 RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT 250
+ EA +M T PD+ T++ ++ A ++ + ++ M ++ P+T
Sbjct: 217 SSGNWREALKLCKKM-TENGVGPDLVTHNIILSAYKTGAQYAKALSYFELMKGTNIRPDT 275
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLES-ATCKPDVWTMNTILSVFANKGQVDMMERWY 309
T NI++ K G +++ + M E A C PDV T +I+ +++ GQ++ +
Sbjct: 276 TTLNIIIYCLTKLGQYEKAIGIFKSMREKRAECHPDVVTFTSIIHLYSVNGQIENCRAVF 335
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
G+ P ++N L+GAY M + SV ++ +Y +++ ++
Sbjct: 336 STMVAEGLKPNIVSYNTLMGAYASHGMNKEALSVFNAIKNSGLRPDVVSYTSLLNSYGRS 395
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFY 429
K FE M + +K + ++ +I+ Y + GL + + +R + I N
Sbjct: 396 QQPKKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQDGIYPNAVSI 455
Query: 430 NAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+++AC + + ++ V + + +H + ++ ++ +Y G +K ++
Sbjct: 456 CTLLAACGRCSRKVNIDVVLQAAERRHIKLNTIAYNSAIGSYMNVGEFEKATSM 509
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 124/290 (42%), Gaps = 33/290 (11%)
Query: 109 NTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFN 168
NT+ ++ H + K+ AL VF +K +P +Y LL G+S QP+ AR+VF
Sbjct: 351 NTLMGAYASHGMNKE---ALSVFNAIKNSGL-RPDVVSYTSLLNSYGRSQQPKKAREVFE 406
Query: 169 EMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDA 228
M + ++P Y A++ AY N L+ EA L +M+ P+ + TL+ AC
Sbjct: 407 MMKRDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQ-DGIYPNAVSICTLLAACGRC 465
Query: 229 MRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWT 288
R I+ + Q + R + NT+ N +G Y G F++ + M +S PD T
Sbjct: 466 SRKVNIDVVLQAAERRHIKLNTIAYNSAIGSYMNVGEFEKATSMYRSMRKSKVI-PDAVT 524
Query: 289 MNTILSVFA---------------------------NKGQVDMMERWYEKFRNFGIDPET 321
++S + G++ E + K + G P+
Sbjct: 525 FTVLISGCCKMTKYCEALEFLSEMMDLKIPMTKEAYSSGKITEAESMFNKMKMAGCSPDV 584
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGD 371
T+ +++ AY + K ++++ M + + + ++ AF+ GD
Sbjct: 585 VTYTMMLHAYNAAEHWKKACALLQEMEEYNIQPDTIACSALMRAFNKGGD 634
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 152/398 (38%), Gaps = 79/398 (19%)
Query: 123 QWFQALQVFEMLKEQPF-YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
Q+ +A+ +F+ ++E+ P T+ ++ L +GQ E R VF+ MV EG++P
Sbjct: 290 QYEKAIGIFKSMREKRAECHPDVVTFTSIIHLYSVNGQIENCRAVFSTMVAEGLKPNIVS 349
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y L+ AY + + EA N +K +PDV +Y++L+ + + + + +++ M
Sbjct: 350 YNTLMGAYASHGMNKEALSVFNAIKN-SGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMM 408
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLES-------------ATC------ 282
+ PN V+ N ++ YG G+ + VL M + A C
Sbjct: 409 KRDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQDGIYPNAVSICTLLAACGRCSRK 468
Query: 283 ---------------KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNIL 327
K + N+ + + N G+ + Y R + P+ TF +L
Sbjct: 469 VNIDVVLQAAERRHIKLNTIAYNSAIGSYMNVGEFEKATSMYRSMRKSKVIPDAVTFTVL 528
Query: 328 IGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGM 387
I K Y + + M L+ P T Y++ G E F +M G
Sbjct: 529 ISGCCKMTKYCEALEFLSEMMDLKIPMTKEAYSS--------GKITEAESMFNKMKMAGC 580
Query: 388 KADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMER 447
D T+ +++ Y A + K AC
Sbjct: 581 SPDVVTYTMMLHAYNAAEHWKK-------------------------ACA---------- 605
Query: 448 VYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
+ + M+E + +PD+ S + A+ K G KV L +
Sbjct: 606 LLQEMEEYNIQPDTIACSALMRAFNKGGDPSKVLILAE 643
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 4/203 (1%)
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
+ D++ M ++ + A D + + + + P+ T N LI A+G+ + +
Sbjct: 134 RTDIYNM--MIRLHARHNWTDQARGLFFEMQKWRCKPDAETCNALINAHGRSGQWRWAMN 191
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+ME M + P + STYNN+I A G+ + ++M G+ D T +++ Y
Sbjct: 192 IMEDMLQKAIPPSRSTYNNLINACGSSGNWREALKLCKKMTENGVGPDLVTHNIILSAYK 251
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKH--CRPD 460
+ K +S L I + + N +I K + ++K M+EK C PD
Sbjct: 252 TGAQYAKALSYFELMKGTNIRPDTTTLNIIIYCLTKLGQYEKAIGIFKSMREKRAECHPD 311
Query: 461 SETFSIMTEAYAKEGMNDKVYAL 483
TF+ + Y+ G + A+
Sbjct: 312 VVTFTSIIHLYSVNGQIENCRAV 334
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 71/169 (42%), Gaps = 8/169 (4%)
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMR-KLQFPWTSSTYNNV 362
++ RW +F + F +LI +K + V +M+ + + + YN +
Sbjct: 89 LLNRWVGRF-------ARKNFPLLIKEITQKGSIEHSILVFRWMKNQRNYCARTDIYNMM 141
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I + F +M K D +T LIN + +G + ++ + + I
Sbjct: 142 IRLHARHNWTDQARGLFFEMQKWRCKPDAETCNALINAHGRSGQWRWAMNIMEDMLQKAI 201
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAY 471
+ S YN +I+AC + + E ++ K+M E PD T +I+ AY
Sbjct: 202 PPSRSTYNNLINACGSSGNWREALKLCKKMTENGVGPDLVTHNIILSAY 250
>gi|115445137|ref|NP_001046348.1| Os02g0226900 [Oryza sativa Japonica Group]
gi|49388538|dbj|BAD25660.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|49388672|dbj|BAD25856.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535879|dbj|BAF08262.1| Os02g0226900 [Oryza sativa Japonica Group]
Length = 637
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 158/382 (41%), Gaps = 51/382 (13%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QA QVFE +K Q P TY L+ + GK+G+ F+EMV +G + +
Sbjct: 239 QAFQVFEDMK-QKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTI 297
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYS-TLIKACVDAMRFELIETLYQDMDER 244
+ A +N ++D+ L++M +CQP+ +TYS TL + L E L D+ R
Sbjct: 298 IEALGKNKMVDKVIFVLSKMVE-NDCQPNQFTYSITLDILATEGQLHRLNEVL--DICSR 354
Query: 245 SVTPNT---VTQNIVLGGY-----------------GKAGMFDQMERVLSG--------- 275
+ + + +++ G+ G F M VL
Sbjct: 355 FMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAID 414
Query: 276 ---MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
M+ DV N + S QV + ++K + GI P+ T+NI+I +YG
Sbjct: 415 LLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYG 474
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
+ + DK S + E M TYN++I GD F++M +G D
Sbjct: 475 RVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVF 534
Query: 393 TFCCLINGYANA-------GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
T+ LI + + LF ++IS N+ YN ++ + E
Sbjct: 535 TYSILIECFGKSNKVEMACSLFDEMISE-------GCTPNIVTYNILLDCLERRGKTEEA 587
Query: 446 ERVYKRMKEKHCRPDSETFSIM 467
++Y+ MK++ PDS T+SI+
Sbjct: 588 HKLYETMKQQGLIPDSITYSIL 609
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 140/341 (41%), Gaps = 34/341 (9%)
Query: 165 KVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
+V+ EM +G + Y LL A + ++D+AF MK +C PD YTY+ LI+
Sbjct: 207 QVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQ-KHCVPDAYTYTILIRM 265
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
A R + + +M + N + N ++ GK M D++ VLS M+E+ C+P
Sbjct: 266 SGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVEN-DCQP 324
Query: 285 DVWTMNTILSVFANKGQVDMMERWYE---KFRNFGI-----------DPETRTFNILIGA 330
+ +T + L + A +GQ+ + + +F N I + N+
Sbjct: 325 NQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVFCRM 384
Query: 331 YGKKRMYDKMSSV------------------MEYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
+ D+ + V + M + YN V A +
Sbjct: 385 WNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQV 444
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAV 432
+ F++M G+ D T+ +I+ Y GL K + +V YN++
Sbjct: 445 SFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSL 504
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
I+ K DL E ++K M+EK PD T+SI+ E + K
Sbjct: 505 INCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGK 545
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 398 INGYANAGLFHKVISSVRLASKLQIAE---------NVSFYNAVISACIKADDLMEMERV 448
++GY + + S ++ Q+ E ++ YN ++ A KA + + +V
Sbjct: 184 LSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQV 243
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
++ MK+KHC PD+ T++I+ K G K + E
Sbjct: 244 FEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDE 281
>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
Length = 1161
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 163/389 (41%), Gaps = 45/389 (11%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E TY L+ + G+ AR VFN M+ + + P+ YT ++ YCRN ID+A
Sbjct: 328 PDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSI 387
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L++M+ + P TYS L+ L +D+ R +T N + I++ G+
Sbjct: 388 LSEMQ-ITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFC 446
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G + +++L M E PDV T + +++ ++ + + + GI P
Sbjct: 447 QVGEISKAKQILKSMFEDGI-DPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPND 505
Query: 322 RTF-----------------------------------NILIGAYGKKRMYDKMSSVMEY 346
+ N L+ A+ ++ M + +Y
Sbjct: 506 VLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQY 565
Query: 347 MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGL 406
M ++ + S ++N +I+++ G+ ++ M G + T+ L+ G G
Sbjct: 566 MSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGG- 624
Query: 407 FHKVISSVRLASKLQI--AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETF 464
H V + ++ L I A + +NA++ + L E + ++M + +C PD T+
Sbjct: 625 -HLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTY 683
Query: 465 SIMTEAYAKEGMNDKVYALEQEKLQMLLE 493
+I+ + ++G + LQM+LE
Sbjct: 684 TILLSGFCRKGKILPALVI----LQMMLE 708
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 143/347 (41%), Gaps = 1/347 (0%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y P TY LL L + G AR+ + +++ + + ALL CR +DEA
Sbjct: 606 YSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEAL 665
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
+M NC PD++TY+ L+ + + Q M E+ V P+TV +L G
Sbjct: 666 DLCEKMIK-NNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNG 724
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
G V ++ D N++++ + V+ ++R + P
Sbjct: 725 LINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYP 784
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
+ ++NIL+ Y K+ + K + +YM + + TY +I S+ G
Sbjct: 785 NSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFL 844
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
E+M EG+ D F LI ++ H + L ++ + ++A+I+ I+
Sbjct: 845 EKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRK 904
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
L +V M + +P+ + + A + G D+ + L++E
Sbjct: 905 GYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEE 951
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 139/350 (39%), Gaps = 4/350 (1%)
Query: 126 QALQVFE-MLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+AL + E M+K P TY LL + G+ A + M+E+G+ P YT
Sbjct: 663 EALDLCEKMIKNNCL--PDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTC 720
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
LL + A +++ D Y++L+ + + I+ + DM +
Sbjct: 721 LLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQN 780
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
V PN+ + NI++ GY K G F + + M+ +PD T ++ + G +D+
Sbjct: 781 EVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGI-RPDNVTYRLLILGLSECGLIDI 839
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
++ EK GI P+ F+ILI A+ +K V M+ L +S T++ +I
Sbjct: 840 AVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMIN 899
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
G H +M G++ + + L+N G + + I
Sbjct: 900 GLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVP 959
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
+++I + L E V+ M P TF+ + + KE
Sbjct: 960 AEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKE 1009
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 136/346 (39%), Gaps = 37/346 (10%)
Query: 155 GKSGQPELARKVFNEMVEEGIEPTPELY----------------TALLAAYCRNSLIDEA 198
G P + N +VEEG L+ LL + C N +A
Sbjct: 186 GFKASPVSCNTILNALVEEGESKHVWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRKA 245
Query: 199 FVTLNQMKTLPNCQ-PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVL 257
L +MK+ C + TY+T++ V RF+ + +DM+ SV + T NI
Sbjct: 246 EDMLQKMKS---CHISNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNI-- 300
Query: 258 GGYGKAGMFDQMERV--------LSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
M D++ R+ L + PD T NT+++ F +G+++ +
Sbjct: 301 -------MIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVF 353
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
+ P T+ +I Y + R DK S++ M+ + TY+ ++ + +
Sbjct: 354 NHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKV 413
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFY 429
Y E + + G+ + LI+G+ G K ++ + I +V Y
Sbjct: 414 SMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITY 473
Query: 430 NAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+A+I+ + + E + + RM++ P+ ++ + Y K G
Sbjct: 474 SALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAG 519
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/330 (19%), Positives = 128/330 (38%), Gaps = 2/330 (0%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY +L K G+ + A V +M + ++ Y ++ CR AF+ L +M
Sbjct: 262 TYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRM 321
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
+ + PD TY+TLI + ++ M +++ P+ T ++ GY +
Sbjct: 322 RK-DDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRR 380
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
D+ +LS M + P T + +L+ + + E ++ GI
Sbjct: 381 IDKALSILSEM-QITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRT 439
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
ILI + + K +++ M + TY+ +I M + +M
Sbjct: 440 ILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKS 499
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
G+ + + LI Y AG + + + + N +NA++ A + + E
Sbjct: 500 GILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEA 559
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
E + M + DS +F+ + ++Y G
Sbjct: 560 EHFRQYMSRMNISFDSVSFNRIIDSYCHRG 589
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/413 (19%), Positives = 150/413 (36%), Gaps = 78/413 (18%)
Query: 67 LWKEGEYPGVS--ETSIPGYRSKRTPIKNLKKKLERKAKAKAWVNTVAETFSDH--VLKK 122
+ KEG Y + + GY R + +K+ + + + + N+ + H V +
Sbjct: 742 ICKEGLYADCIAYNSLMNGYLKSRN-VNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRG 800
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
Q+ ++L +++ + + +P TY L++ L + G ++A K +MV EGI P ++
Sbjct: 801 QFSKSLYLYKYMVRKGI-RPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVF 859
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
L+ A+ S + A N MK L
Sbjct: 860 DILITAFSEKSKMHNALQVFNCMKWL---------------------------------- 885
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
++P++ T + ++ G + G D +VL ML+ +P+ +++ G++
Sbjct: 886 --HMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGL-QPNHTHYIALVNAKCRVGEI 942
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
D R E+ + GI P + V E +++
Sbjct: 943 DRAFRLKEEMKAIGIVP---------------------AEVAE--------------SSI 967
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I G + F M GM TF L++ + RL ++
Sbjct: 968 IRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRL 1027
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+V YN +I+ K + + +Y MK K P+ T+ +T A G
Sbjct: 1028 RVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTG 1080
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 94/234 (40%), Gaps = 38/234 (16%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
K + ALQVF +K P T+ ++ L + G + + KV +EM++ G++P
Sbjct: 869 KSKMHNALQVFNCMKWLHM-SPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHT 927
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMKT----------------LPNCQ------------ 212
Y AL+ A CR ID AF +MK L C
Sbjct: 928 HYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSM 987
Query: 213 ------PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGK-AGM 265
P V T++TL+ + + L + M+ + + V+ N+++ G K +
Sbjct: 988 MRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHI 1047
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
D ++ L G ++S P++ T T+ + G+V E E G+ P
Sbjct: 1048 SDALD--LYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIP 1099
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 68/167 (40%), Gaps = 2/167 (1%)
Query: 318 DPETRT-FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME 376
DP F +L+ AY K+R + + +M F + + N ++ A + G++KH+
Sbjct: 152 DPTNHVVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPVSCNTILNALVEEGESKHVW 211
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
+ A T L+N G F K ++ I+ +V+ YN ++
Sbjct: 212 LFLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSCHISNSVT-YNTILHWY 270
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+K V + M+ + D T++IM + + + + + L
Sbjct: 271 VKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLL 317
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 120/256 (46%), Gaps = 2/256 (0%)
Query: 213 PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERV 272
P V + +++ DA R++ + +Y DM + V P+ T N +L + KAG DQ +
Sbjct: 192 PFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVAL 251
Query: 273 LSGM-LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAY 331
L M +A C P+ T N +++ A KG+++ + + R T+N LI
Sbjct: 252 LKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMR-LSKKASAFTYNPLITGL 310
Query: 332 GKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
+ +K +++ M T TYN +I+ G+A+ + F++M A+G+ D
Sbjct: 311 LARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDL 370
Query: 392 KTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKR 451
T+ LINGY AG + + + + V YN +I + DL R+ +
Sbjct: 371 ITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEE 430
Query: 452 MKEKHCRPDSETFSIM 467
M E+ C PD T++I+
Sbjct: 431 MTEEDCLPDVCTYTIL 446
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 130/334 (38%), Gaps = 2/334 (0%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ L K+G E A+ F+EM +G+ P Y +L+ YC+ + +A
Sbjct: 333 PTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCL 392
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+K P V TY+ LI E L ++M E P+ T I++ G
Sbjct: 393 FGDLKR-AGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSC 451
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
M R+ + S +PD + NT +S G + + E+ GI +T
Sbjct: 452 MVRNL-AMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDT 510
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+N+LI K + M TY +I A + G + F+
Sbjct: 511 VTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDG 570
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M A G+ T+ I+ Y G + R + + N YN ++ A +
Sbjct: 571 MVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGR 630
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ + M E+ P+ T++++ + KEG
Sbjct: 631 TESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEG 664
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 140/325 (43%), Gaps = 11/325 (3%)
Query: 164 RKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKT-LPNCQPDVYTYSTLI 222
R V+++M++ G+EP+ Y LL ++C+ +D+A L M+ C P+ TY+ +I
Sbjct: 214 RAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVI 273
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
E L D+ S + T N ++ G ++ +L M E+
Sbjct: 274 NGLARKGELEKAAQLV-DIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEM-ENEGI 331
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
P V T NT++ G + + +++ R G+ P+ T+N LI Y K +
Sbjct: 332 VPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALC 391
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+ +++ T TYN +I+ + +GD + E+M E D T+ L+NG
Sbjct: 392 LFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSC 451
Query: 403 NAGLFHKVISSVRLASKLQIAENVS----FYNAVISACIKADDLMEMERVYKRMKEKHCR 458
+ ++ VR+ +++ + YN ISA + + ++ + M +
Sbjct: 452 MV----RNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGIS 507
Query: 459 PDSETFSIMTEAYAKEGMNDKVYAL 483
D+ T++++ + K G Y L
Sbjct: 508 SDTVTYNVLIDGLCKTGSLKDAYVL 532
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 2/153 (1%)
Query: 118 HVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEP 177
H + + +A +F+ + P TY + + G LA F +M+EEG+EP
Sbjct: 555 HCERGRLIEAKNIFDGMVASGL-SPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEP 613
Query: 178 TPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETL 237
Y L+ A CR + A+ ++M P+ YTY+ LI + L
Sbjct: 614 NEVTYNVLMHALCRMGRTESAYQHFHEMLE-RGLVPNKYTYTLLIDGSCKEGNWVHAIRL 672
Query: 238 YQDMDERSVTPNTVTQNIVLGGYGKAGMFDQME 270
Y +M ++ + P+ T N + G+G+ M+D ++
Sbjct: 673 YCEMHQKGIHPDHCTHNALFKGFGEGHMYDAVQ 705
>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Cucumis sativus]
Length = 1079
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 163/372 (43%), Gaps = 43/372 (11%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P E +Y L+ K G+ +A +VFNEM+E + P Y L+ YC N +EA
Sbjct: 278 PNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRV 337
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
L+ M+ + +P+ T TL+ + +F++ + + + N ++ +++ G
Sbjct: 338 LDVMEA-NDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLC 396
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+ G+ D+ ++L M + PD+ T + +++ F G ++ + K G P
Sbjct: 397 RNGLLDEAFQLLIEMCKDGV-HPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNN 455
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSS---TYNNVIEAFSDMGDAKHMEYT 378
F+ LI Y ++ + M++ + ++ T N+++ + + G E
Sbjct: 456 VIFSTLI--YNSCKV-GNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEF 512
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAG-------LFHKVIS------------------- 412
+ G+ ++ TF C+INGYAN G +F ++IS
Sbjct: 513 LHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCK 572
Query: 413 ------SVRLASKLQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
+ +L KL +A + YN +I K+ +L+E R+++ M + + PDS T
Sbjct: 573 GQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYT 632
Query: 464 FSIMTEAYAKEG 475
++ + +EG
Sbjct: 633 YTCILSGLIREG 644
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 92/436 (21%), Positives = 172/436 (39%), Gaps = 53/436 (12%)
Query: 84 YRSKRTPIKNLKKKLERKAKAKAWVNTVAET-----FSDHVLKKQWFQALQVFEMLKEQP 138
Y+S + + + LER + +N ++ T + L + FQ L EM K+
Sbjct: 361 YKSAKFDVA--RNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLL--IEMCKDG- 415
Query: 139 FYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA 198
P T+ L+ K G A++V +++ EG P +++ L+ C+ + EA
Sbjct: 416 -VHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEA 474
Query: 199 FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLG 258
M L D +T ++L+ + + + E + + PN+VT + ++
Sbjct: 475 MKFYAAM-NLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIIN 533
Query: 259 GYGK----AGMFDQMERVLS----------GMLESATCKP-------------------- 284
GY +G F +R++S G L CK
Sbjct: 534 GYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAV 593
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN-ILIGAYGKKRMYDKMSSV 343
D + NT++ + G + R +E+ I P++ T+ IL G + R+ +
Sbjct: 594 DTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFL 653
Query: 344 MEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
M+K S Y I+ G +K Y F++M +G+ D + +GY+
Sbjct: 654 GRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSR 713
Query: 404 AGLFHKVISSVRLASKLQ---IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
G KV S+ L SK + + N++ +N ++ + D+M ++Y M+ P+
Sbjct: 714 MG---KVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPN 770
Query: 461 SETFSIMTEAYAKEGM 476
T+ + GM
Sbjct: 771 RLTYHSLILGLCNHGM 786
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 136/338 (40%), Gaps = 10/338 (2%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P ++ L+ +L G+ + A + M G PT Y LL+ C+ A V
Sbjct: 173 PNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVL 232
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
++ M+ Q DV TY+ I + R + + M + +TPN V+ N ++ G+
Sbjct: 233 IHHMEC-KGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFV 291
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
K G RV + M+E P++ T N +++ + G + R + + P
Sbjct: 292 KEGKIGVATRVFNEMIE-LNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNE 350
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T L+ K +D +++E + ++ +I+ G +
Sbjct: 351 VTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIE 410
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ----IAENVSFYNAVISACI 437
M +G+ D TF LING+ G +K + + SK+ + NV F + ++C
Sbjct: 411 MCKDGVHPDIITFSVLINGFCKVGNINK---AKEVMSKIYREGFVPNNVIFSTLIYNSC- 466
Query: 438 KADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
K ++ E + Y M D+ T + + + + G
Sbjct: 467 KVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENG 504
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 123/308 (39%), Gaps = 2/308 (0%)
Query: 179 PELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLY 238
P ++ L+ Y R ++ A T + M + +P VYT + ++ + V R L+ + +
Sbjct: 105 PAVFDLLIRVYLRQGMVGHAVNTFSSM-LIRGFKPSVYTCNMIMASMVKNCRAHLVWSFF 163
Query: 239 QDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
+ M V PN + NI++ G + +L+ M+E P + + NT+LS
Sbjct: 164 KQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILT-MMERNGYVPTIVSYNTLLSWCCK 222
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
KG+ GI + T+N+ I + + + V++ MR +
Sbjct: 223 KGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVS 282
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
YN +I F G F +M + + T+ LINGY G F + + + +
Sbjct: 283 YNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVME 342
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
+ N +++ K+ + +R + + ++M + + G+ D
Sbjct: 343 ANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLD 402
Query: 479 KVYALEQE 486
+ + L E
Sbjct: 403 EAFQLLIE 410
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 97/230 (42%), Gaps = 3/230 (1%)
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
+ N ++++ Y + GM S ML KP V+T N I++ + ++
Sbjct: 102 SSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGF-KPSVYTCNMIMASMVKNCRAHLVW 160
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
++++ + P +FNILI + K +++ M + + T +YN ++
Sbjct: 161 SFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWC 220
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA-NAGLFHKVISSVRLASKLQIAEN 425
G K M +G++AD T+ I+ N+ + ++ +K+
Sbjct: 221 CKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNE 280
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
VS YN +I+ +K + RV+ M E + P+ T++I+ Y G
Sbjct: 281 VS-YNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCING 329
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 87/444 (19%), Positives = 160/444 (36%), Gaps = 130/444 (29%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
+Y L+V + KSG A ++F EM++ I P YT +L+ R + AF+ L ++
Sbjct: 597 SYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRL 656
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIET-----LYQDMDER---------------- 244
Q ++ T ++++ C F+ ++ L+++M+E+
Sbjct: 657 M-----QKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGY 711
Query: 245 -------------------SVTPNTVTQNIVLGGYGKA-------GMFDQMERVLSGMLE 278
+V PN T NI+L GY + +++ M R SG
Sbjct: 712 SRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRR--SGFF- 768
Query: 279 SATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYD 338
P+ T ++++ N G +++ + + F + TFN+LI + D
Sbjct: 769 -----PNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLD 823
Query: 339 KMSSV-----------------------------------MEYMRKLQFPWTSSTYNNVI 363
K+ + M M K F TS Y ++
Sbjct: 824 KVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMM 883
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG------------------ 405
+ +GD + +QM A G+ D C ++ G A G
Sbjct: 884 KRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKI 943
Query: 406 --------LFHKVI--SSVRLASKLQIAE-------NVSFYNAVISACIKADDLMEMERV 448
L H + + A L+I ++ YN +ISAC D++
Sbjct: 944 PTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDF 1003
Query: 449 YKRMKEKHCRPDSETFSIMTEAYA 472
Y+ +K+K P+ T+ ++ A +
Sbjct: 1004 YEEIKQKGLLPNMTTYRVLVSAIS 1027
>gi|242086476|ref|XP_002443663.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
gi|241944356|gb|EES17501.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
Length = 853
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 152/338 (44%), Gaps = 9/338 (2%)
Query: 108 VNTVAETFSDHVLKKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
N V + DH + AL F+ LK QP ++ TY ++ +LG++ Q + +K+
Sbjct: 330 ANQVLKLLHDHTV------ALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVLKKLL 383
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
+EM +PT Y ++ AY R + + EA +M+ +PD TY TLI
Sbjct: 384 DEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVKVFEEMQE-AGYEPDRVTYCTLIDIHAK 442
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
A ++ LY M E ++P+T T + ++ GK G ++ M+E+ C P++
Sbjct: 443 AGYLDIAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENG-CTPNLV 501
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T N ++++ A + + + Y+ + G P+ T++I++ G D+ +V M
Sbjct: 502 TYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEM 561
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
R+ P Y +++ + G+ ++ M +G++ + T L++ + F
Sbjct: 562 RRDWAP-DEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRF 620
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
++ + +V Y ++S C +A M +
Sbjct: 621 QDAYIVLQNMLAQGLVPSVQTYTLLLSCCTEAQAQMGL 658
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 2/198 (1%)
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
+L++ CK D + N +L + + +W + R G + T+ +IG G+ R
Sbjct: 317 VLDNLHCKIDAFQANQVLKLLHDHTVALGFFQWLK--RQPGFKHDGHTYTTMIGILGQAR 374
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
+ + +++ M + T TYN +I A+ K FE+M G + D T+C
Sbjct: 375 QFGVLKKLLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYC 434
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEK 455
LI+ +A AG + ++ ++ + Y+A+++ K L +++ M E
Sbjct: 435 TLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIEN 494
Query: 456 HCRPDSETFSIMTEAYAK 473
C P+ T++IM AK
Sbjct: 495 GCTPNLVTYNIMIALQAK 512
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 128/312 (41%), Gaps = 21/312 (6%)
Query: 195 IDEAFVTLNQMKTLP---------NCQPDVYTYSTLIKACVD-AMRFELIETLYQDMDER 244
+++ + TL QMK P +C+ D + + ++K D + + L + +
Sbjct: 298 VEQYYHTLQQMKWGPMTEHVLDNLHCKIDAFQANQVLKLLHDHTVALGFFQWLKR---QP 354
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ T ++G G+A F ++++L M A CKP V T N I+ + +
Sbjct: 355 GFKHDGHTYTTMIGILGQARQFGVLKKLLDEM-SRAHCKPTVVTYNRIIHAYGRANYLKE 413
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ +E+ + G +P+ T+ LI + K D + M+++ + TY+ ++
Sbjct: 414 AVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYSAMVN 473
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA- 423
G F +M G + T+ +I A A + V V+L +Q+A
Sbjct: 474 CLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYENV---VKLYKDMQVAG 530
Query: 424 --ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
+ Y+ V+ L E E V+ M+ + PD + ++ + + K G DK
Sbjct: 531 FRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR-RDWAPDEPVYGLLVDLWGKAGNVDKAL 589
Query: 482 ALEQEKLQMLLE 493
Q LQ L+
Sbjct: 590 GWYQAMLQDGLQ 601
>gi|218190347|gb|EEC72774.1| hypothetical protein OsI_06434 [Oryza sativa Indica Group]
Length = 579
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 158/382 (41%), Gaps = 51/382 (13%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QA QVFE +K Q P TY L+ + GK+G+ F+EMV +G + +
Sbjct: 181 QAFQVFEDMK-QKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTI 239
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYS-TLIKACVDAMRFELIETLYQDMDER 244
+ A +N ++D+ L++M +CQP+ +TYS TL + L E L D+ R
Sbjct: 240 IEALGKNKMVDKVIFVLSKMVE-NDCQPNQFTYSITLDILATEGQLHRLNEVL--DICSR 296
Query: 245 SVTPNT---VTQNIVLGGY-----------------GKAGMFDQMERVLSG--------- 275
+ + + +++ G+ G F M VL
Sbjct: 297 FMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAID 356
Query: 276 ---MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
M+ DV N + S QV + ++K + GI P+ T+NI+I +YG
Sbjct: 357 LLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYG 416
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
+ + DK S + E M TYN++I GD F++M +G D
Sbjct: 417 RVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVF 476
Query: 393 TFCCLINGYANA-------GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
T+ LI + + LF ++IS N+ YN ++ + E
Sbjct: 477 TYSILIECFGKSNKVEMACSLFDEMISE-------GCTPNIVTYNILLDCLERRGKTEEA 529
Query: 446 ERVYKRMKEKHCRPDSETFSIM 467
++Y+ MK++ PDS T+SI+
Sbjct: 530 HKLYETMKQQGLIPDSITYSIL 551
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 140/341 (41%), Gaps = 34/341 (9%)
Query: 165 KVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
+V+ EM +G + Y LL A + ++D+AF MK +C PD YTY+ LI+
Sbjct: 149 QVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQ-KHCVPDAYTYTILIRM 207
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
A R + + +M + N + N ++ GK M D++ VLS M+E+ C+P
Sbjct: 208 SGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVEN-DCQP 266
Query: 285 DVWTMNTILSVFANKGQVDMMERWYE---KFRNFGI-----------DPETRTFNILIGA 330
+ +T + L + A +GQ+ + + +F N I + N+
Sbjct: 267 NQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVFCRM 326
Query: 331 YGKKRMYDKMSSV------------------MEYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
+ D+ + V + M + YN V A +
Sbjct: 327 WNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQV 386
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAV 432
+ F++M G+ D T+ +I+ Y GL K + +V YN++
Sbjct: 387 SFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSL 446
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
I+ K DL E ++K M+EK PD T+SI+ E + K
Sbjct: 447 INCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGK 487
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 398 INGYANAGLFHKVISSVRLASKLQIAE---------NVSFYNAVISACIKADDLMEMERV 448
++GY + + S ++ Q+ E ++ YN ++ A KA + + +V
Sbjct: 126 LSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQV 185
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
++ MK+KHC PD+ T++I+ K G K + E
Sbjct: 186 FEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDE 223
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 155/368 (42%), Gaps = 6/368 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
+W +VF + E+ +P Y L+ L K G+ + A V + MV G+EP Y
Sbjct: 200 RWEDVGKVFVEMSEKGI-EPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTY 258
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM- 241
L+ C+ + EA L +M PDV TY+TLIK D + + L ++M
Sbjct: 259 NVLINCMCKEGSVKEAIGVLKKMSE-KGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV 317
Query: 242 -DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
+ V PN VT N V+ G G Q +V M+E C ++ T N ++
Sbjct: 318 RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV-RAMMEETGCMVNLVTYNLLIGGLLRVH 376
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+V ++ + G++P++ T++ILI + K D+ ++ MR Y
Sbjct: 377 KVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYI 436
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
++ A + G + F +M D + +I+G AG ++
Sbjct: 437 PLLVAMCEQGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDE 495
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+ + Y+ VI+ K+ D+ V K+M PD F + + Y+ +G +KV
Sbjct: 496 GLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKV 555
Query: 481 YALEQEKL 488
L +E +
Sbjct: 556 LELIREMI 563
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 143/337 (42%), Gaps = 15/337 (4%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL------YTALLAAYCRNSLIDEAF 199
+Y +L L + G + A + M +EP P YT L+ A C + L D+A
Sbjct: 79 SYNTVLTALCRRGHHDRAGALLRAM---SLEPHPACRPNAVSYTVLMRALCADRLADQAV 135
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L M++ + DV TY TLI+ DA + L +M E + PN V + +L G
Sbjct: 136 GLLRSMRS-AGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQG 194
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
Y K+G ++ + +V M E +PDV ++ G+ + G++P
Sbjct: 195 YCKSGRWEDVGKVFVEMSEKGI-EPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
T+N+LI K+ + V++ M + TYN +I+ SD+ + +
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313
Query: 380 EQMHAEG---MKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
E+M G +K + TF +I G + G + + + N+ YN +I
Sbjct: 314 EEM-VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGL 372
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
++ + + + M PDS T+SI+ + + K
Sbjct: 373 LRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCK 409
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 150/339 (44%), Gaps = 9/339 (2%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P Y LL KSG+ E KVF EM E+GIEP +YT L+ + C+ +A
Sbjct: 182 EPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHG 241
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
++ M +P+V TY+ LI C + E I L + M E+ V P+ VT N ++ G
Sbjct: 242 VMDMM-VRRGLEPNVVTYNVLINCMCKEGSVKEAIGVL-KKMSEKGVAPDVVTYNTLIKG 299
Query: 260 YGKAGMFDQMERVLSGMLESAT-CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGID 318
D+ +L M+ KP+V T N+++ + G++ + G
Sbjct: 300 LSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCM 359
Query: 319 PETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYT 378
T+N+LIG + K +M+ M L S TY+ +I+ F M E
Sbjct: 360 VNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDL 419
Query: 379 FEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL--QIAENVSFYNAVISAC 436
M G++ + + L+ G+ + + L +++ +V Y+ +I
Sbjct: 420 LSTMRDRGIEPELFHYIPLLVAMCEQGMMER---ARNLFNEMDNNFPLDVVAYSTMIHGA 476
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
KA DL + + K + ++ PD+ T+SI+ +AK G
Sbjct: 477 CKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSG 515
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 100/247 (40%), Gaps = 10/247 (4%)
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGM-LES-ATCKPDVWTMNTILSVFANKGQVDMME 306
+ V+ N VL + G D+ +L M LE C+P+ + ++ D
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAF 366
R+ G+ + T+ LI DK +M M + Y+++++ +
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195
Query: 367 SDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENV 426
G + + F +M +G++ D + LI+ G K + + + + NV
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255
Query: 427 SFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
YN +I+ K + E V K+M EK PD T++ + +G++D LE +
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI-----KGLSD---VLEMD 307
Query: 487 KLQMLLE 493
+ LLE
Sbjct: 308 EAMWLLE 314
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 154/356 (43%), Gaps = 6/356 (1%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
PK + LL L KSG +L RK FN+M+ GI P+ Y ++ C+ ++ +
Sbjct: 193 PKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRL 252
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
QM+ + PDV TY++LI E + +L+ +M + P+ +T N ++ Y
Sbjct: 253 FVQMREM-GLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYC 311
Query: 262 KAGMFDQMERVLSGM--LESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
K F++M R +++ KP+V T +T++ F +G + + R G+ P
Sbjct: 312 K---FEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLP 368
Query: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTF 379
T+ LI A K + ++ M + TY +++ G E F
Sbjct: 369 NEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVF 428
Query: 380 EQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKA 439
M +G+ + + + L++GY A + ++ ++ I ++ Y ++I
Sbjct: 429 RSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQ 488
Query: 440 DDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEAS 495
L E + + + MK + + + + +AY K G + QE + +EA+
Sbjct: 489 RKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEAT 544
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 162/405 (40%), Gaps = 40/405 (9%)
Query: 129 QVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAA 188
++F ++E P TY L+ GK G E +FNEM + G P Y L+
Sbjct: 251 RLFVQMREMGL-SPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINC 309
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDERSVT 247
YC+ + AF ++MK +P+V TYSTLI A C + M I+ L DM +
Sbjct: 310 YCKFEKMPRAFEYFSEMKN-NGLKPNVVTYSTLIDAFCKEGMMQGAIKLL-XDMRRTGLL 367
Query: 248 PNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMER 307
PN T ++ KAG + ++L+ ML++ K ++ T +L G++ E
Sbjct: 368 PNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV-KLNIVTYTALLDGLCKAGRMIEAEE 426
Query: 308 WYEKFRNFGIDPETRTFNILIGAYGK-KRMYDKMSS------------------------ 342
+ GI P + + L+ Y K +RM D M
Sbjct: 427 VFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHC 486
Query: 343 ----------VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
++E M+ +I+A+ G + F++M G++A
Sbjct: 487 SQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIV 546
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
T+C LI+G AG+ + L + NV+ Y ++I + + ++++ M
Sbjct: 547 TYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEM 606
Query: 453 KEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASGH 497
+ + PD F+ + + K G + L ++ +E H
Sbjct: 607 QCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLH 651
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 142/345 (41%), Gaps = 37/345 (10%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM 205
TY LL L K+G+ A +VF M+++GI P ++YTAL+ Y + +++A L QM
Sbjct: 407 TYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQM 466
Query: 206 KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGM 265
T N +PD+ Y ++I + E + + ++M R ++ N V ++ Y KAG
Sbjct: 467 -TECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGK 525
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
M + + + T ++ G V++ ++ + + G+ P +
Sbjct: 526 SSDALNFFQEM-QDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYT 584
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
LI NN IE+ AK + F++M
Sbjct: 585 SLIDGL--------------------------CXNNCIES------AKKL---FDEMQCR 609
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
GM D F LI+G G + + + ++L I ++ Y +++S + +L +
Sbjct: 610 GMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQA 669
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
+ + M EK P+ + Y K G D+ L+ E +M
Sbjct: 670 RKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERM 714
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 133/345 (38%), Gaps = 22/345 (6%)
Query: 152 VLLGKSGQPELARKVFNEMVEE-GIEPTPELYTALLAAYCR----------------NSL 194
+LLG P+LA K F + G T E Y ++ R NS
Sbjct: 76 ILLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSR 135
Query: 195 IDEAFVTLNQMKTLPN----CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNT 250
+D F N L + C + L V+ E + M P
Sbjct: 136 MDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKA 195
Query: 251 VTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYE 310
+ N +L K+G + + + M+ A P V+T N ++ +G ++ R +
Sbjct: 196 RSCNFLLHRLSKSGNGQLVRKFFNDMI-GAGIAPSVFTYNVMIDYLCKEGDLENSRRLFV 254
Query: 311 KFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMG 370
+ R G+ P+ T+N LI YGK ++++S+ M+ + TYN +I +
Sbjct: 255 QMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFE 314
Query: 371 DAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYN 430
F +M G+K + T+ LI+ + G+ I + + + N Y
Sbjct: 315 KMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYT 374
Query: 431 AVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
++I A KA +L E ++ M + + + T++ + + K G
Sbjct: 375 SLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAG 419
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 80/195 (41%)
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
C + + SVF G ++ + + RNF P+ R+ N L+ K +
Sbjct: 156 CVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVR 215
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
M + TYN +I+ GD ++ F QM G+ D T+ LI+GY
Sbjct: 216 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 275
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
G +V S + ++ YN +I+ K + + + MK +P+
Sbjct: 276 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 335
Query: 462 ETFSIMTEAYAKEGM 476
T+S + +A+ KEGM
Sbjct: 336 VTYSTLIDAFCKEGM 350
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 159/381 (41%), Gaps = 58/381 (15%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P TY L+ ++ +PELA F +++ G+ + LL +C DEA
Sbjct: 112 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 171
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRF----ELIET--------------------- 236
L C PDV++YS L+K+ D + +L+
Sbjct: 172 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 231
Query: 237 ------------LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
L+++M +R + P+ VT N V+ KA D+ E L M+ P
Sbjct: 232 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL-P 290
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGA---YGK----KRMY 337
+ WT N ++ +++ GQ R +++ R I P+ T ++L+G+ YGK + ++
Sbjct: 291 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 350
Query: 338 DKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCL 397
D M+ K Q P S YN ++ ++ G M F+ M +G+ D TF L
Sbjct: 351 DTMAM------KGQNPDVFS-YNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVL 403
Query: 398 INGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACI---KADDLMEMERVYKRMKE 454
I YAN G+ K + + +V Y VI+A K DD ME + +M +
Sbjct: 404 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK---FNQMID 460
Query: 455 KHCRPDSETFSIMTEAYAKEG 475
+ PD ++ + + + G
Sbjct: 461 QGVAPDKYAYNCLIQGFCTHG 481
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/424 (22%), Positives = 159/424 (37%), Gaps = 44/424 (10%)
Query: 108 VNTVAETFSDHVLKKQWF------QALQVFEMLKEQ-PFYQPKEGTYMKLLVLLGKSGQP 160
+ V + FS +L K QA + M+ E P Y ++ K G
Sbjct: 179 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDV 238
Query: 161 ELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQM---KTLPN------- 210
A +F EMV+ GI P Y +++ A C+ +D+A L QM + LPN
Sbjct: 239 NKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNL 298
Query: 211 ------------------------CQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSV 246
PDV T S L+ + + + ++ M +
Sbjct: 299 IYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQ 358
Query: 247 TPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMME 306
P+ + NI+L GY G M + ML PD +T N ++ +AN G +D
Sbjct: 359 NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI-APDFYTFNVLIKAYANCGMLDKAM 417
Query: 307 RWYEKFRNFGIDPETRTFNILIGAYGK-KRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
+ + R+ G+ P+ T+ +I A + +M D M + + + P YN +I+
Sbjct: 418 IIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP-DKYAYNCLIQG 476
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
F G + ++ GM D F +IN G + L + + +
Sbjct: 477 FCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPD 536
Query: 426 VSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQ 485
YN ++ + + RV+ M P+ + + Y K G D+ +L +
Sbjct: 537 AVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFR 596
Query: 486 EKLQ 489
E LQ
Sbjct: 597 EMLQ 600
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 149/365 (40%), Gaps = 5/365 (1%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
QW +A++VF+ ++ P T L+ L K G+ + AR VF+ M +G P Y
Sbjct: 307 QWKEAVRVFKEMRRHSIL-PDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 365
Query: 183 TALLAAYC-RNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+L Y + L+D L + PD YT++ LIKA + + ++ +M
Sbjct: 366 NIMLNGYATKGCLVD--MTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM 423
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
+ V P+ VT V+ + G D + M++ PD + N ++ F G
Sbjct: 424 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV-APDKYAYNCLIQGFCTHGS 482
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ + + N G+ + F+ +I K ++ + + + YN
Sbjct: 483 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNM 542
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
+++ + +G + F+ M + G++ + + L+NGY G + +S R +
Sbjct: 543 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRG 602
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
I + Y+ +I +A + + + M E D T++I+ K D+
Sbjct: 603 IKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAI 662
Query: 482 ALEQE 486
L +E
Sbjct: 663 FLFKE 667
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 7/199 (3%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+ L +F EML Q +P Y ++ L ++G+ A+ F+EM E GI Y
Sbjct: 590 EGLSLFREML--QRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNI 647
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
+L +N DEA +++ + N + ++ T +T+I R E + L+ +
Sbjct: 648 VLRGLFKNRCFDEAIFLFKELRAM-NVKINIITLNTMIDGMFQTRRVEEAKDLFASISRS 706
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ P+ VT +I++ K G+ ++ E + S M ++A C+P+ +N ++ K ++
Sbjct: 707 RLVPSVVTYSIMITNLIKEGLVEEAEDMFSSM-QNAGCEPNSRLLNHVVRELLKKNEIVR 765
Query: 305 MERWYEKF--RNFGIDPET 321
+ K RNF ++ T
Sbjct: 766 AGAYLSKIDERNFSLEHLT 784
>gi|222622462|gb|EEE56594.1| hypothetical protein OsJ_05954 [Oryza sativa Japonica Group]
Length = 579
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 158/382 (41%), Gaps = 51/382 (13%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
QA QVFE +K Q P TY L+ + GK+G+ F+EMV +G + +
Sbjct: 181 QAFQVFEDMK-QKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTI 239
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYS-TLIKACVDAMRFELIETLYQDMDER 244
+ A +N ++D+ L++M +CQP+ +TYS TL + L E L D+ R
Sbjct: 240 IEALGKNKMVDKVIFVLSKMVE-NDCQPNQFTYSITLDILATEGQLHRLNEVL--DICSR 296
Query: 245 SVTPNT---VTQNIVLGGY-----------------GKAGMFDQMERVLSG--------- 275
+ + + +++ G+ G F M VL
Sbjct: 297 FMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAID 356
Query: 276 ---MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYG 332
M+ DV N + S QV + ++K + GI P+ T+NI+I +YG
Sbjct: 357 LLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYG 416
Query: 333 KKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
+ + DK S + E M TYN++I GD F++M +G D
Sbjct: 417 RVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVF 476
Query: 393 TFCCLINGYANA-------GLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
T+ LI + + LF ++IS N+ YN ++ + E
Sbjct: 477 TYSILIECFGKSNKVEMACSLFDEMISE-------GCTPNIVTYNILLDCLERRGKTEEA 529
Query: 446 ERVYKRMKEKHCRPDSETFSIM 467
++Y+ MK++ PDS T+SI+
Sbjct: 530 HKLYETMKQQGLIPDSITYSIL 551
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 140/341 (41%), Gaps = 34/341 (9%)
Query: 165 KVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA 224
+V+ EM +G + Y LL A + ++D+AF MK +C PD YTY+ LI+
Sbjct: 149 QVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQ-KHCVPDAYTYTILIRM 207
Query: 225 CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKP 284
A R + + +M + N + N ++ GK M D++ VLS M+E+ C+P
Sbjct: 208 SGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVEN-DCQP 266
Query: 285 DVWTMNTILSVFANKGQVDMMERWYE---KFRNFGI-----------DPETRTFNILIGA 330
+ +T + L + A +GQ+ + + +F N I + N+
Sbjct: 267 NQFTYSITLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVFCRM 326
Query: 331 YGKKRMYDKMSSV------------------MEYMRKLQFPWTSSTYNNVIEAFSDMGDA 372
+ D+ + V + M + YN V A +
Sbjct: 327 WNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQV 386
Query: 373 KHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAV 432
+ F++M G+ D T+ +I+ Y GL K + +V YN++
Sbjct: 387 SFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSL 446
Query: 433 ISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
I+ K DL E ++K M+EK PD T+SI+ E + K
Sbjct: 447 INCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGK 487
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 398 INGYANAGLFHKVISSVRLASKLQIAE---------NVSFYNAVISACIKADDLMEMERV 448
++GY + + S ++ Q+ E ++ YN ++ A KA + + +V
Sbjct: 126 LSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQV 185
Query: 449 YKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
++ MK+KHC PD+ T++I+ K G K + E
Sbjct: 186 FEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDE 223
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 158/354 (44%), Gaps = 11/354 (3%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
Q L++ + + E+ F + TY L+ L K G+ + A ++ + MV EP Y L
Sbjct: 320 QGLEMMDFMLEKGF-ELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTL 378
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKA-CVDAMRFELIETLYQDMDER 244
+ C+ + + EA L ++ T PDV T+++LI+ C+ + R E+ L+++M E+
Sbjct: 379 IGTLCKENHV-EAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNR-EIAMELFEEMKEK 436
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
P+ T +I++ + +L M E + C +V NT++ +V
Sbjct: 437 GCDPDEFTYSILIESLCSERRLKEALMLLKEM-ELSGCARNVVVYNTLIDGLCKNNRVGD 495
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
E +++ G+ + T+N LI K + ++ + +M+ M TY +++
Sbjct: 496 AEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLK 555
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG---LFHKVISSVRLASKLQ 421
F GD K + M G + D T+ LI G AG + K++ SV++ +
Sbjct: 556 YFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVL 615
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ YN VI A K E R+++ M EK PD T+ I+ G
Sbjct: 616 TPQA---YNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGG 666
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 169/432 (39%), Gaps = 51/432 (11%)
Query: 91 IKNLKKKLERKAKAKAWVNTVAETFSD-HVLKKQWFQALQV---FEMLKEQPFY--QPKE 144
+K K KL +K + V S ++L + +A Q+ ML++ P Y +P E
Sbjct: 175 VKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDE 234
Query: 145 GTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF----- 199
T+ L+ + E A ++ MVE G E T L+ C+ I+EA
Sbjct: 235 KTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE 294
Query: 200 --------VTLNQMKTLPNCQP--------------------DVYTYSTLIKA-CVDAMR 230
VT N + C+ DVYTY++LI C
Sbjct: 295 EEGFCPDQVTFNALVN-GLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEI 353
Query: 231 FELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMN 290
E +E L+ M R PNTVT N ++G K + L+ +L S PDV T N
Sbjct: 354 DEAVEILHH-MVSRDCEPNTVTYNTLIGTLCKENHVEAATE-LARVLTSKGVLPDVCTFN 411
Query: 291 TILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKL 350
+++ ++ +E+ + G DP+ T++ILI + +R + +++ M
Sbjct: 412 SLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELS 471
Query: 351 QFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKV 410
YN +I+ E F+QM G+ + T+ LING + +V
Sbjct: 472 GCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKS---KRV 528
Query: 411 ISSVRLASKLQIAENVS----FYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSI 466
+ +L ++ I E + Y ++ + D+ + + M C PD T+
Sbjct: 529 EEAAQLMDQM-IMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGT 587
Query: 467 MTEAYAKEGMND 478
+ K G D
Sbjct: 588 LIGGLCKAGRVD 599
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 11/133 (8%)
Query: 352 FPWTS---------STYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
F W S S ++ ++ + G M QMH+ + D TF + YA
Sbjct: 79 FQWASAQPNYSAHPSVFHELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFLETYA 138
Query: 403 NAGLFHKVISSVRLASKLQIA--ENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPD 460
+ H I+ + L + A + FYN +S +KA+ L +E ++ +M PD
Sbjct: 139 TSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPD 198
Query: 461 SETFSIMTEAYAK 473
TF+I+ A K
Sbjct: 199 VSTFNILIRALCK 211
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 86/223 (38%), Gaps = 7/223 (3%)
Query: 256 VLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV--DMMERWYEKFR 313
+L +AG FD M +L M S+ D T L +A + ++ + R
Sbjct: 98 LLRQLARAGSFDSMLTLLRQM-HSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMER 156
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
+F + P+TR +N+ + K + ++ M P ST+N +I A +
Sbjct: 157 DFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLR 216
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
E M G++ D KTF L+ G+ + L + N ++
Sbjct: 217 PAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLV 276
Query: 434 SACIKADDLMEMER-VYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ K + E R +Y+ +E C PD TF+ + + G
Sbjct: 277 NGLCKEGRIEEALRFIYE--EEGFC-PDQVTFNALVNGLCRTG 316
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 159/352 (45%), Gaps = 10/352 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A+ +F+ L+ + P TY L+ L K + + A + +EM G++P Y AL
Sbjct: 176 RAVTLFDSLRRRQV-APDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNAL 234
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
L + ++ +++ P +P++ TY+ ++ RF+ + +++ M +
Sbjct: 235 LGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANN 294
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+ +T I++ G ++G D RV S ++++ D N+++ F G+V
Sbjct: 295 LQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVI-DAAMYNSLVKGFCQAGRVQEA 353
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRK-LQFPWTSSTYNNVIE 364
++++ G+ RT+NI+I M D+ + + + K + + T+ +I
Sbjct: 354 WKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIH 412
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ--- 421
G A FE+ G + D ++ +ING N G +++ +V++ K+
Sbjct: 413 GLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVG---RLVDAVKVYEKMDKDG 469
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
N YNA+IS + + R+Y +M + C P T++ + + K
Sbjct: 470 CKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCK 521
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 146/368 (39%), Gaps = 16/368 (4%)
Query: 128 LQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVE-EGIEPTPELYTALL 186
L + L+ +P + E + +L ++ P+ A F + G P + ALL
Sbjct: 69 LNLLPRLRHRPRFS--ESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALL 126
Query: 187 AAYCRNSLIDEA---FVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
A+ R +A F +L+ P++ TY+ ++++ + TL+ +
Sbjct: 127 DAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRR 186
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
R V P+ +T + ++ G K D +L M S +PDV N +L G+ +
Sbjct: 187 RQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGV-QPDVVCYNALLGGCFKAGEFE 245
Query: 304 -MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+M W + ++ G P T+N+++ K + ++ V E M TY +
Sbjct: 246 KVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGIL 305
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFH---KVISSVRLASK 419
I GD + ++ G+ D + L+ G+ AG K S A
Sbjct: 306 IHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAG- 364
Query: 420 LQIAENVSFYNAVISACIKADDLMEMERVYKRM-KEKHCRPDSETFSIMTEAYAKEGMND 478
N+ YN +I + + E ++ + K+ C PD+ TF + + G +
Sbjct: 365 ---LRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFAN 421
Query: 479 KVYALEQE 486
K + + +E
Sbjct: 422 KAFTIFEE 429
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 148/355 (41%), Gaps = 25/355 (7%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEA-- 198
QP TY L+ L +SG + A +V++E+++ G+ +Y +L+ +C+ + EA
Sbjct: 296 QPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWK 355
Query: 199 ------FVTLNQMKTLPNCQPDVYTYSTLIKACVDA-MRFELIETLYQDMDERSVT--PN 249
F L ++T Y+ +IK D+ M E IE D+ E+ V P+
Sbjct: 356 FWDSAGFAGLRNLRT----------YNIMIKGLFDSGMVDEAIE--LWDLLEKDVACIPD 403
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
TVT ++ G + G ++ + S + DV++ +++++ N G++ + Y
Sbjct: 404 TVTFGTLIHGLCQNGFANKAFTIFEEARVSGK-QLDVFSYSSMINGLCNVGRLVDAVKVY 462
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
EK G P + +N LI + + + M T TYN +I+
Sbjct: 463 EKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKA 522
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFY 429
+ +M G D T+ LI G + +S + + +V +
Sbjct: 523 EKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMH 582
Query: 430 NAVISACIKADDLMEMERVYKRMKEK-HCRPDSETFSIMTEAYAKEGMNDKVYAL 483
N +I A + E V+ MKEK +C P+ T++ + + + G DK L
Sbjct: 583 NILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATL 637
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 110/246 (44%), Gaps = 4/246 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
A++V+E + ++ +P Y L+ + + A +++++M + G PT Y L
Sbjct: 457 DAVKVYEKM-DKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTL 515
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ C+ EA +M PD+ TY +LI+ + + ++++ + +
Sbjct: 516 IDGLCKAEKYQEASSVAREMVE-NGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKG 574
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ + + NI++ G AG D+ V S M E C P++ T NT++ G +D
Sbjct: 575 LKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKA 634
Query: 306 ERWYEKFRNFGIDPETRTFNILI-GAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+ G++P+ ++N I G R+++ + + E + + P T T+N ++
Sbjct: 635 ATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIP-TVITWNILVR 693
Query: 365 AFSDMG 370
A G
Sbjct: 694 AVIKYG 699
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 157/385 (40%), Gaps = 42/385 (10%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+++ +AL ++E + E +P TY LL+ +G + A K++ EM +G P
Sbjct: 399 RRKIREALNLWEKMNETGV-KPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVV 457
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMK------------TLPN--------CQ-------- 212
YT L+ + + D+A+ L +MK TL N C+
Sbjct: 458 TYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRF 517
Query: 213 ------PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
P TY+++I + A +YQ M + + PN VT + GY K
Sbjct: 518 ETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCC 577
Query: 267 DQMERVLSGMLESATCK---PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
D + ML CK PD+ N+++ F +G + + G+ P
Sbjct: 578 DLALK----MLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISV 633
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
+N I Y +M ++ + E M K ++TY +I+ FS G+ + +M
Sbjct: 634 YNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMV 693
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
A+G D TF L +G G + ++L I NV YN +I+ ++ L
Sbjct: 694 AKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQ 753
Query: 444 EMERVYKRMKEKHCRPDSETFSIMT 468
E R++ M E+ PD T+ I+
Sbjct: 754 EAFRLHDEMLERKIMPDDTTYDILV 778
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/313 (19%), Positives = 131/313 (41%), Gaps = 3/313 (0%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A +F E + +G+ PT YT L+ + ++A+ QM+ P ++ +I
Sbjct: 301 ALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRD-HGLLPSTNEFNMVI 359
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
K ++ ++ +L+++M + + P+ T NI++ + + + M E+
Sbjct: 360 KGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGV- 417
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
KP + T +++L + G +D + Y + G P T+ L+ + K +DK +
Sbjct: 418 KPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYA 477
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
++ M++ TYN +I +G + ++ EG T+ +ING+
Sbjct: 478 LLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFI 537
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
AG+ + + I N+ Y + I K ++ ++ K RPD
Sbjct: 538 KAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIA 597
Query: 463 TFSIMTEAYAKEG 475
++ + + +EG
Sbjct: 598 AYNSLIFGFCQEG 610
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 145/354 (40%), Gaps = 6/354 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL V +++ F P + T+ ++ +L K G+ E A + +E++ G + + L T L
Sbjct: 230 RALLVLRKMQDAGFV-PWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTL 288
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPN-CQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
+ YC + +A + TL + P TY+ LI+ C + E L + M +
Sbjct: 289 MHGYCLQREVRKALDIFEE--TLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ P+T N+V+ G ++ + M +S PD +T N ++ + ++
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI--PDAFTYNILIHWLCQRRKIRE 404
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+EK G+ P T++ L+ Y D+ + M F TY +++
Sbjct: 405 ALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMK 464
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
+ +M G+ + T+ LING G +V ++
Sbjct: 465 GHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVP 524
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
YN++I+ IKA + VY++M K P+ T++ + Y K D
Sbjct: 525 TAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCD 578
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/366 (18%), Positives = 146/366 (39%), Gaps = 38/366 (10%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
K G + A ++F+EM IEP + + +A+ C+ + A + L +M+ P
Sbjct: 189 KEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQD-AGFVPWD 247
Query: 216 YTYSTLIKACVDAMRF--------ELIET---------------------------LYQD 240
+T+++++ V R EL+ T ++++
Sbjct: 248 FTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEE 307
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
+ P VT +++ G + GM ++ + M + P N ++ N
Sbjct: 308 TLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLL-PSTNEFNMVIKGLLNDK 366
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+++ + GI P+ T+NILI ++R + ++ E M + TY+
Sbjct: 367 LWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYH 425
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+++ + G + +M +G + T+ L+ G+ N F K + + +
Sbjct: 426 SLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQN 485
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
++ N YN +I+ + E+ + KR + + P + T++ + + K GM
Sbjct: 486 GVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSA 545
Query: 481 YALEQE 486
+A+ Q+
Sbjct: 546 FAVYQQ 551
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/198 (18%), Positives = 82/198 (41%), Gaps = 6/198 (3%)
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
D W + ++ +G D R +++ I+P+ R ++ I + K R ++ V+
Sbjct: 176 DAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVL 235
Query: 345 EYMRKLQF-PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
M+ F PW T+N+V++ G + + +++ A G K L++GY
Sbjct: 236 RKMQDAGFVPW-DFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCL 294
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
K + + + Y +I C + + + ++M++ P +
Sbjct: 295 QREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNE 354
Query: 464 FSIMTEAYAKEGMNDKVY 481
F+++ + +NDK++
Sbjct: 355 FNMVIKGL----LNDKLW 368
>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 947
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 153/368 (41%), Gaps = 38/368 (10%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
++ +A + F +KE F +P TY L+ K G E A KV +M +E I P+ EL
Sbjct: 513 EKMIEAEETFNRMKELGF-EPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIEL 571
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
Y +L+ ++ E L++M L P+V TY TLI D R + T Y DM
Sbjct: 572 YNSLIGGLFKSKKTREVMDLLSEM-CLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDM 630
Query: 242 DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ 301
E+ PN + + ++ + G D+ +L M+ L VF + G
Sbjct: 631 IEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVN--------------LDVFLDHGY 676
Query: 302 VDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
D + + + G +++ D + E + P S YN
Sbjct: 677 FDRLHKADD------------------GNLDSQKIADTLD---ESSKSFSLP-NSVVYNI 714
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
I G + F + G D T+C LI+GY+ AG + S K
Sbjct: 715 AIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRG 774
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVY 481
+A N+ YNA+I+ K+ +L ++++ ++ K P+ +++I+ + Y K G +
Sbjct: 775 LAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREAL 834
Query: 482 ALEQEKLQ 489
L + L+
Sbjct: 835 DLRNKMLK 842
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 167/448 (37%), Gaps = 50/448 (11%)
Query: 81 IPGYRSKRTPIKNLKKKLERKAKAKAW-----VNTVAETFSDHVL-----KKQWFQALQV 130
+P RS + +L +K E + + V + F+ ++ K W
Sbjct: 180 VPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNV--A 237
Query: 131 FEMLKEQPF--YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAA 188
+ +KE + ++ TY L+ G E A V M E GI T L+
Sbjct: 238 VDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKG 297
Query: 189 YCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTP 248
YCR ++EA L +M+ D Y Y LI + + L +M +
Sbjct: 298 YCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRM 357
Query: 249 NTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERW 308
N N ++ GY K G + ER+L M++ +P+ ++ +T++ F +G V
Sbjct: 358 NLFICNALINGYCKNGQVSEAERLLMRMVD-WDLEPESYSYSTLMDGFCREGLVTKAISV 416
Query: 309 YEKFRNFGIDPETRTFNIL------IGAYGK---------KR-----------MYDKMSS 342
Y + GI T N L +GA+ KR + D +
Sbjct: 417 YNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFK 476
Query: 343 VMEYMRKLQF-------PWTSSTY--NNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKT 393
+ E+ R L + STY N +I F M E TF +M G + D T
Sbjct: 477 MGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVT 536
Query: 394 FCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMK 453
+ LI+GY G + K I ++ YN++I K+ E+ + M
Sbjct: 537 YRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMC 596
Query: 454 EKHCRPDSETFSIMTEAYAKEGMNDKVY 481
K P+ T+ + + EG DK +
Sbjct: 597 LKGLSPNVVTYGTLIAGWCDEGRLDKAF 624
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 132/297 (44%), Gaps = 2/297 (0%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
K+GQ A ++ MV+ +EP Y+ L+ +CR L+ +A N+M + Q +V
Sbjct: 371 KNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRV-GIQSNV 429
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
T+++L+K FE ++ M +R VTP+ V+ +L K G F + + +
Sbjct: 430 VTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWND 489
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
+L + + NT+++ F ++ E + + + G +P+ T+ LI Y K
Sbjct: 490 ILARGYGRS-TYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLG 548
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
++ V E M K + YN++I + + +M +G+ + T+
Sbjct: 549 NVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYG 608
Query: 396 CLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
LI G+ + G K ++ + A NV + ++S+ + + E + ++M
Sbjct: 609 TLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKM 665
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 137/329 (41%), Gaps = 4/329 (1%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A ++ +EM+ G+ + AL+ YC+N + EA L +M + +P+ Y+YSTL+
Sbjct: 343 AVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDW-DLEPESYSYSTLM 401
Query: 223 KA-CVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT 281
C + + + I ++Y +M + N VT N +L G + G F+ V ML+
Sbjct: 402 DGFCREGLVTKAI-SVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGV 460
Query: 282 CKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMS 341
PD + T+L + G+ + G T FN +I + K +
Sbjct: 461 -TPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAE 519
Query: 342 SVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGY 401
M++L F TY +I+ + +G+ + E+M E + + + LI G
Sbjct: 520 ETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGL 579
Query: 402 ANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
+ +V+ + ++ NV Y +I+ L + Y M EK P+
Sbjct: 580 FKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNV 639
Query: 462 ETFSIMTEAYAKEGMNDKVYALEQEKLQM 490
S + + + G D+ L Q+ + +
Sbjct: 640 IICSKIVSSLYRLGRIDEANMLLQKMVNL 668
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/427 (20%), Positives = 165/427 (38%), Gaps = 102/427 (23%)
Query: 115 FSDHVLKKQWFQ-------ALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVF 167
FSD++L + +L F++ +Q ++P ++ KL+ +L ++ + R
Sbjct: 58 FSDYILDSVLLKLKFNPIASLHFFKLASKQSNFRPNVNSHCKLVHILSRARMYDETRSYL 117
Query: 168 NEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVD 227
NE+V P+ Y++L+ +E K P
Sbjct: 118 NELVT----PSKNNYSSLVVW-------NELVRVFEDFKFSPTV---------------- 150
Query: 228 AMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVW 287
F++I +Y E+ + N + +FD M ++ C P +
Sbjct: 151 ---FDMILKIYC---EKGMIKNALH------------VFDNMGKL--------GCVPSLR 184
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
+ N +LS KG+ Y+ GI P+ T +I++ AY K + ++ M
Sbjct: 185 SCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEM 244
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM------------------------- 382
L F TYN++I+ +GD + E + M
Sbjct: 245 DYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKL 304
Query: 383 -----------HAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL---QIAENVSF 428
+EGM D + LI+GY K+ +VRL ++ + N+
Sbjct: 305 EEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVC---KMDDAVRLRDEMLNVGLRMNLFI 361
Query: 429 YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKL 488
NA+I+ K + E ER+ RM + P+S ++S + + + +EG+ K ++ E L
Sbjct: 362 CNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEML 421
Query: 489 QMLLEAS 495
++ ++++
Sbjct: 422 RVGIQSN 428
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 141/330 (42%), Gaps = 12/330 (3%)
Query: 129 QVFEMLKEQPF--YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALL 186
+V ++L E P TY L+ G+ + A + +M+E+G P + + ++
Sbjct: 587 EVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIV 646
Query: 187 AAYCRNSLIDEAFVTLNQMKTLPNCQPDVYT----YSTLIKACVDAMRFELIETLYQDMD 242
++ R IDEA + L +M L DV+ + L KA + + I +
Sbjct: 647 SSLYRLGRIDEANMLLQKMVNL-----DVFLDHGYFDRLHKADDGNLDSQKIADTLDESS 701
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
+ PN+V NI + G K+G D +++ S +L PD +T T++ ++ G V
Sbjct: 702 KSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGF-SPDNFTYCTLIHGYSAAGNV 760
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ ++ G+ P T+N LI K D+ + + + +YN +
Sbjct: 761 NDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNIL 820
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I+ + G+ + +M EG+ T+ LI G+ G K + + +L
Sbjct: 821 IDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFA 880
Query: 423 AENVSFYNAVISACIKADDLMEMERVYKRM 452
+N++ + ++ +K ++ ++ +++ M
Sbjct: 881 DQNIAKFVKLVEGHVKCGEVKKIAKLHNMM 910
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 2/207 (0%)
Query: 177 PTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIET 236
P +Y +A C++ +D+A + + L PD +TY TLI A +
Sbjct: 707 PNSVVYNIAIAGLCKSGKVDDAKKIFSSL-LLRGFSPDNFTYCTLIHGYSAAGNVNDAFS 765
Query: 237 LYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVF 296
L +M +R + PN +T N ++ G K+G D+ +++ L P+V + N ++ +
Sbjct: 766 LRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDK-LHLKGLAPNVISYNILIDGY 824
Query: 297 ANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS 356
G K GI P T++ LI + K+ K +++++ MR+L
Sbjct: 825 CKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNI 884
Query: 357 STYNNVIEAFSDMGDAKHMEYTFEQMH 383
+ + ++E G+ K + MH
Sbjct: 885 AKFVKLVEGHVKCGEVKKIAKLHNMMH 911
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/388 (20%), Positives = 146/388 (37%), Gaps = 45/388 (11%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P+ +Y L+ + G A V+NEM+ GI+ + +LL CR ++A
Sbjct: 391 EPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALH 450
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ M PD +Y TL+ F L+ D+ R +T N ++ G+
Sbjct: 451 VWHLMLK-RGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGF 509
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K + E + M E +PD T T++ + G V+ + EK I P
Sbjct: 510 CKMEKMIEAEETFNRMKELGF-EPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPS 568
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS---STYNNVIEAFSDMGDAKHMEY 377
+N LIG K + K VM+ + ++ S TY +I + D G
Sbjct: 569 IELYNSLIGGLFKSK---KTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFT 625
Query: 378 TFEQMHAEGMKADTKTFCCLI-----------------------NGYANAGLFHKV---- 410
+ M +G A C I + + + G F ++
Sbjct: 626 AYFDMIEKGF-APNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKAD 684
Query: 411 ---ISSVRLASKLQIAE------NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDS 461
+ S ++A L + N YN I+ K+ + + ++++ + + PD+
Sbjct: 685 DGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDN 744
Query: 462 ETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
T+ + Y+ G + ++L E L+
Sbjct: 745 FTYCTLIHGYSAAGNVNDAFSLRDEMLK 772
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 152/366 (41%), Gaps = 37/366 (10%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
K G+ + A +F+EM+ +G+ P Y +L+ C+ +D+A L M PD
Sbjct: 212 KEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFD-KGVMPDT 270
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
TY+ +I+ + E L + M + P+ VT ++++ Y K G + V
Sbjct: 271 RTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDS 330
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
M+ KP+ + +L +A KG + + + GI E R FNILI AY K
Sbjct: 331 MVRKGQ-KPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHG 389
Query: 336 MYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFC 395
DK + MR+ +Y+ VI G + Y F QM +EG+ + +F
Sbjct: 390 AVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFT 449
Query: 396 CLINGYANAGLFHKV------------------ISSV--RLASKLQIAENVSFYNAVISA 435
LI+G + G + KV ++++ L + ++ E F++ VI
Sbjct: 450 SLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHI 509
Query: 436 CIKAD---------------DLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
+K D + E + RM RPDS T++ + Y K G +
Sbjct: 510 GVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDA 569
Query: 481 YALEQE 486
AL +E
Sbjct: 570 LALYRE 575
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 160/387 (41%), Gaps = 45/387 (11%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEG---IEPTPELYTALLAAYCRNSLID 196
Y P +Y L+ L + + A ++ M +G P Y ++ + + +D
Sbjct: 158 YTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVD 217
Query: 197 EAFVTLNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQN 254
+A+ ++M + LP PDV TY++LI A + + Q M ++ V P+T T N
Sbjct: 218 KAYFLFHEMMGQGLP---PDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYN 274
Query: 255 IVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV-------DMMER 307
I++ GY G ++ R+L M S +PDV T + ++ + G+ D M R
Sbjct: 275 IMIRGYCSLGQLEEAVRLLKKMSGSGL-QPDVVTYSLLIQYYCKIGRCAEARSVFDSMVR 333
Query: 308 WYEK---------------------FRNF-------GIDPETRTFNILIGAYGKKRMYDK 339
+K R+ GI E R FNILI AY K DK
Sbjct: 334 KGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDK 393
Query: 340 MSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+ MR+ +Y+ VI G + Y F QM +EG+ + +F LI+
Sbjct: 394 AMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIH 453
Query: 400 GYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRP 459
G + G + KV I + F N ++ K ++E + + + +P
Sbjct: 454 GLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKP 513
Query: 460 DSETFSIMTEAYAKEG-MNDKVYALEQ 485
D +++ + + Y G M++ + L++
Sbjct: 514 DVVSYNTLIDGYCFVGKMDESIKQLDR 540
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 153/367 (41%), Gaps = 48/367 (13%)
Query: 162 LARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF---------------VTLNQM- 205
LA +FN MV G+ + L+ +C +D AF VTLNQ+
Sbjct: 74 LAVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLI 133
Query: 206 -----------------KTLPNC--QPDVYTYSTLIKA-CVDAMRFELIETLYQDMDER- 244
+ +P PDV++Y+ LIK CV+ E +E L +
Sbjct: 134 KGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGG 193
Query: 245 -SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+ +PN V+ N V+ G+ K G D+ + M+ PDV T N+++ +D
Sbjct: 194 YNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGL-PPDVVTYNSLIDGLCKAQAMD 252
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ + G+ P+TRT+NI+I Y ++ +++ M TY+ +I
Sbjct: 253 KAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLI 312
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIA 423
+ + +G F+ M +G K ++ + L++GYA G + VR L I
Sbjct: 313 QYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKG----ALIDVRDLLDLMIR 368
Query: 424 ENVSF----YNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG-MND 478
+ + F +N +I A K + + + M++ RPD ++S + K G + D
Sbjct: 369 DGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVED 428
Query: 479 KVYALEQ 485
VY Q
Sbjct: 429 AVYHFNQ 435
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 150/348 (43%), Gaps = 12/348 (3%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P Y LL G R + + M+ +GI + L+ AY ++ +D+A
Sbjct: 337 KPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMT 396
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+M+ +PDV +YST+I R E + M ++PN ++ ++ G
Sbjct: 397 AFTEMRQ-NGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGL 455
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
G + ++E + M+ PD MNTI+ +G+V + +++ + G+ P+
Sbjct: 456 CSIGEWKKVEELAFEMINRGI-HPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPD 514
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFE 380
++N LI Y D+ ++ M + S TYN+++ + G + +
Sbjct: 515 VVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYR 574
Query: 381 QMHAEGMKADTKTFCCLINGYANAGLFH--KVISSVRLASKL---QIAENVSFYNAVISA 435
+M + +K FC + + GLF +++++ L K+ + YN V+
Sbjct: 575 EMFRKDVK-----FCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGG 629
Query: 436 CIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYAL 483
+ + E R+++ ++ K D TFSI+ A K G D+ +L
Sbjct: 630 LCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSL 677
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 161/351 (45%), Gaps = 15/351 (4%)
Query: 150 LLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP 209
L+ K G + A F EM + G+ P Y+ ++ C+ +++A NQM +
Sbjct: 381 LICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVS-E 439
Query: 210 NCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQM 269
P++ ++++LI ++ +E L +M R + P+ + N ++ K G +
Sbjct: 440 GLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEA 499
Query: 270 ERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIG 329
+ M+ KPDV + NT++ + G++D + ++ + G+ P++ T+N L+
Sbjct: 500 QDFFD-MVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLN 558
Query: 330 AYGKK-RMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMK 388
Y K R+ D ++ E RK + + T N ++ G + +M G +
Sbjct: 559 GYFKNGRVEDALALYREMFRK-DVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQ 617
Query: 389 ADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE---NVSFYNAVISACIKADDLMEM 445
+T+ ++ G V ++R+ L+ E +V ++ VI+A +K + E
Sbjct: 618 LRIETYNTVLGGLCENSC---VDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEA 674
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQMLLEASG 496
+ ++ M + PD T+S+M +++ +EG+ + E + L + +E +G
Sbjct: 675 KSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLE-----ESDNLFLSMEKNG 720
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 139/327 (42%), Gaps = 5/327 (1%)
Query: 166 VFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLP--NCQPDVYTYSTLIK 223
VF M E G P Y AL+ C EA L M NC P+V +Y+T+I
Sbjct: 149 VFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVID 208
Query: 224 ACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCK 283
+ L+ +M + + P+ VT N ++ G KA D+ +L M +
Sbjct: 209 GFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGV-M 267
Query: 284 PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSV 343
PD T N ++ + + GQ++ R +K G+ P+ T+++LI Y K + SV
Sbjct: 268 PDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSV 327
Query: 344 MEYM-RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
+ M RK Q P S+ Y+ ++ ++ G + + M +G+ + + F LI YA
Sbjct: 328 FDSMVRKGQKP-NSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYA 386
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
G K +++ + + +V Y+ VI K + + + +M + P+
Sbjct: 387 KHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNII 446
Query: 463 TFSIMTEAYAKEGMNDKVYALEQEKLQ 489
+F+ + G KV L E +
Sbjct: 447 SFTSLIHGLCSIGEWKKVEELAFEMIN 473
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 113/239 (47%), Gaps = 4/239 (1%)
Query: 154 LGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQP 213
L K G+ A+ F+ ++ G++P Y L+ YC +DE+ L++M ++ +P
Sbjct: 490 LCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSI-GLRP 548
Query: 214 DVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVL 273
D +TY++L+ R E LY++M + V +T NI+L G +AG +
Sbjct: 549 DSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELY 608
Query: 274 SGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGK 333
M++ T + + T NT+L VD R +E R+ + + RTF+I+I A K
Sbjct: 609 MKMVDRGT-QLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLK 667
Query: 334 KRMYDKMSSVMEYMRKLQFPWTSS-TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADT 391
D+ S+ M L+ P TY+ +I++ + G + + F M G AD+
Sbjct: 668 VGRIDEAKSLFSAM-VLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADS 725
>gi|298705285|emb|CBJ48975.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 674
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 155/363 (42%), Gaps = 14/363 (3%)
Query: 123 QWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELY 182
QW +A+++ ++ P TY ++ GKSGQ LA + +EM + G P P +
Sbjct: 195 QWQKAVKLLRTMRRDGIL-PVTVTYNTVISACGKSGQWSLAVSLLDEMSDMGCPPGPVTF 253
Query: 183 TALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMD 242
+ + A R ++QM+ D Y Y+T I A ++ +MD
Sbjct: 254 ASAMLACERARQWHHVLRIMDQMQE-DEVWVDKYAYTTAIHAAGQLGKWARCVRYLDEMD 312
Query: 243 ERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQV 302
V + VT ++ + G + Q E++L ML+ P+V T +++ V GQ
Sbjct: 313 SNGVAKDVVTVSVAISACADKGQWAQAEKLLEDMLDDGL-TPNVITYTSLMVVLRRGGQH 371
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNV 362
+ + + R+ G+ P RT+++ I A + + + ++++ M + +YN
Sbjct: 372 ERAIKILDLMRSKGVMPNVRTYSVAIAACADAKEWRRALALLKEMEREGVSPNEISYNTA 431
Query: 363 IEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQI 422
I A D G ++M + G+KA T+ + A + + + + QI
Sbjct: 432 IRACGDAGQLSEALDLMDEMESRGVKASVVTYGTAVAACQRAADWKMALELLAAMRREQI 491
Query: 423 AENVSFYNAVISAC----------IKADDLMEMERVYKRMK-EKHCRPDSETFSIMTEAY 471
N Y +I AC + AD + E +++ +++ ++C +++ + +A
Sbjct: 492 EPNEIVYGGIIKACCAAGQASKALVDADQIEEAIQLFNKLQARRNCSVTIHSYTPLVDAL 551
Query: 472 AKE 474
+E
Sbjct: 552 TRE 554
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 136/339 (40%), Gaps = 3/339 (0%)
Query: 138 PFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEE-GIEPTPELYTALLAAYCRNSLID 196
P +P +Y ++ + + + A +F EM +E GI P Y AL++A + +
Sbjct: 103 PAVEPNVVSYNNVITACANAKKQKRAEGIFREMTKERGIRPNVFTYGALISACAKRGNWE 162
Query: 197 EAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIV 256
++ L QM+ P+ YST+I AC + +++ L + M + P TVT N V
Sbjct: 163 DSVNYLEQMRQ-SGLAPNAVIYSTVISACERSDQWQKAVKLLRTMRRDGILPVTVTYNTV 221
Query: 257 LGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFG 316
+ GK+G + +L M + C P T + + Q + R ++ +
Sbjct: 222 ISACGKSGQWSLAVSLLDEMSDMG-CPPGPVTFASAMLACERARQWHHVLRIMDQMQEDE 280
Query: 317 IDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHME 376
+ + + I A G+ + + ++ M T + I A +D G E
Sbjct: 281 VWVDKYAYTTAIHAAGQLGKWARCVRYLDEMDSNGVAKDVVTVSVAISACADKGQWAQAE 340
Query: 377 YTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISAC 436
E M +G+ + T+ L+ G + I + L + NV Y+ I+AC
Sbjct: 341 KLLEDMLDDGLTPNVITYTSLMVVLRRGGQHERAIKILDLMRSKGVMPNVRTYSVAIAAC 400
Query: 437 IKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
A + + K M+ + P+ +++ A G
Sbjct: 401 ADAKEWRRALALLKEMEREGVSPNEISYNTAIRACGDAG 439
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 118/274 (43%), Gaps = 2/274 (0%)
Query: 207 TLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM-DERSVTPNTVTQNIVLGGYGKAGM 265
+P +P+V +Y+ +I AC +A + + E ++++M ER + PN T ++ K G
Sbjct: 101 AVPAVEPNVVSYNNVITACANAKKQKRAEGIFREMTKERGIRPNVFTYGALISACAKRGN 160
Query: 266 FDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFN 325
++ L M +S P+ +T++S Q + R GI P T T+N
Sbjct: 161 WEDSVNYLEQMRQSGL-APNAVIYSTVISACERSDQWQKAVKLLRTMRRDGILPVTVTYN 219
Query: 326 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAE 385
+I A GK + S+++ M + P T+ + + A H+ +QM +
Sbjct: 220 TVISACGKSGQWSLAVSLLDEMSDMGCPPGPVTFASAMLACERARQWHHVLRIMDQMQED 279
Query: 386 GMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEM 445
+ D + I+ G + + + + +A++V + ISAC +
Sbjct: 280 EVWVDKYAYTTAIHAAGQLGKWARCVRYLDEMDSNGVAKDVVTVSVAISACADKGQWAQA 339
Query: 446 ERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDK 479
E++ + M + P+ T++ + + G +++
Sbjct: 340 EKLLEDMLDDGLTPNVITYTSLMVVLRRGGQHER 373
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
Query: 146 TYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYC-----RNSLID---- 196
TY + ++ ++A ++ M E IEP +Y ++ A C +L+D
Sbjct: 462 TYGTAVAACQRAADWKMALELLAAMRREQIEPNEIVYGGIIKACCAAGQASKALVDADQI 521
Query: 197 -EAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNI 255
EA N+++ NC +++Y+ L+ A +R++ L+Q+M++R + P
Sbjct: 522 EEAIQLFNKLQARRNCSVTIHSYTPLVDALTRELRWQEAIMLFQEMEDRKIMPTVQCYTS 581
Query: 256 VLGGYGKAGMFDQMERVLSGM 276
V+ ++G +D R+L M
Sbjct: 582 VVRACERSGQYDVALRLLDDM 602
>gi|125539212|gb|EAY85607.1| hypothetical protein OsI_06979 [Oryza sativa Indica Group]
Length = 538
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 155/370 (41%), Gaps = 45/370 (12%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P GTY L+ L ++G+ A V + M+E+ P + YT ++ AYCR+ I EA +
Sbjct: 158 EPDVGTYSTLIAGLCRAGKVVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKL 217
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
+ +M+ L C P+V TY+ LI+A D +F+ +E + + + P+TVT NI + G
Sbjct: 218 LMAEMERL-GCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGL 276
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQ----VDMMER-----WYE- 310
K G + +L ML +P +T + +L+ + + + ++ER WY
Sbjct: 277 CKKGKAKEALELLDVMLGEGL-EPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAG 335
Query: 311 ---------------KFRNF----------GIDPETRTFNILIGAYGKKRMYDKMSSVME 345
K+R GI+P TRTFNILI + + K S
Sbjct: 336 VVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLC---VGGKSSLAKS 392
Query: 346 YMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAG 405
+ F TYN ++ F G M + + D T+ +I+G
Sbjct: 393 LIHSQGFAANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRER 452
Query: 406 LFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFS 465
F + L ++ +++ + AD + E+ R++ K PD F
Sbjct: 453 KFDAATAC--FLKSLTSGLSMDVLTVLLNRLVYADKIWEINRIF---DGKDFVPDHHVFD 507
Query: 466 IMTEAYAKEG 475
+ + + G
Sbjct: 508 LTIRTFCRAG 517
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 162/353 (45%), Gaps = 17/353 (4%)
Query: 126 QALQVF-EMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTA 184
+AL+ F EML P + L+ + + + +LA ++ ++ G+EP Y+
Sbjct: 112 EALKAFDEMLASG--VAPNASSQNILIKMHARRSEFDLAWELIHK---SGVEPDVGTYST 166
Query: 185 LLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
L+A CR + EA+ L+ M NC+P V TY+ +++A R + L +M+
Sbjct: 167 LIAGLCRAGKVVEAWGVLDWMLE-KNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERL 225
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESAT--CKPDVWTMNTILSVFANKGQV 302
PN VT N+++ FD++E+VL +ES+T KP T N ++ KG+
Sbjct: 226 GCLPNVVTYNVLIRALCDDDKFDEVEQVL---MESSTKDWKPSTVTYNIYMNGLCKKGKA 282
Query: 303 DMMERWYEKFRNFGIDPETRTFNILIGAYG-KKRMYDKMSSVMEYMRKLQFPWTSSTYNN 361
+ G++P T++IL+ R+ D + ++E +L++ YN
Sbjct: 283 KEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIY-LLERSTELKWYAGVVAYNT 341
Query: 362 VIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQ 421
V+ + +MG + + M +G++ +T+TF LI G K + L
Sbjct: 342 VMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGG---KSSLAKSLIHSQG 398
Query: 422 IAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKE 474
A NV YN ++ L E R+ M+EK+ PD T++I+ + +E
Sbjct: 399 FAANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRE 451
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 132/334 (39%), Gaps = 40/334 (11%)
Query: 142 PKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVT 201
P Y L+ L ++G+ A K F+EM+ G+ P L+ + R S D A+
Sbjct: 92 PNVLCYNTLVNALAEAGREGEALKAFDEMLASGVAPNASSQNILIKMHARRSEFDLAWEL 151
Query: 202 LNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYG 261
+++ +PDV TYSTLI G
Sbjct: 152 IHK----SGVEPDVGTYSTLI-----------------------------------AGLC 172
Query: 262 KAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPET 321
+AG + VL MLE C+P V T I+ + G++ + + G P
Sbjct: 173 RAGKVVEAWGVLDWMLEK-NCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLPNV 231
Query: 322 RTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQ 381
T+N+LI A +D++ V+ + ++ TYN + G AK +
Sbjct: 232 VTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELLDV 291
Query: 382 MHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADD 441
M EG++ T+ L+N ++ I + +++L+ V YN V+S+ +
Sbjct: 292 MLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEMGK 351
Query: 442 LMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEG 475
+ ++ M +K P++ TF+I+ + G
Sbjct: 352 WRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGG 385
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 5/203 (2%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
++P TY + L K G+ + A ++ + M+ EG+EPT ++ LL C +S + +A
Sbjct: 262 WKPSTVTYNIYMNGLCKKGKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAI 321
Query: 200 VTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGG 259
L + L V Y+T++ + + ++ I L DM ++ + PNT T NI++
Sbjct: 322 YLLERSTEL-KWYAGVVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRS 380
Query: 260 YGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDP 319
G + ++ S +V T N +L F G++ R I P
Sbjct: 381 LCVGG----KSSLAKSLIHSQGFAANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAP 436
Query: 320 ETRTFNILIGAYGKKRMYDKMSS 342
+ T+ I+I ++R +D ++
Sbjct: 437 DEVTYTIIIDGLCRERKFDAATA 459
>gi|449463623|ref|XP_004149531.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Cucumis sativus]
Length = 580
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 162/355 (45%), Gaps = 43/355 (12%)
Query: 122 KQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPEL 181
K+W ++ E L+ Q ++ E ++ L+ GK G A KV N M ++G P
Sbjct: 116 KKWNLVSEILEWLRTQSWWNFSEMDFVMLITAYGKLGDFNRAEKVLNLMNKKGYAPNVVS 175
Query: 182 YTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDM 241
+TAL+ AY R + A +M++ +P TY ++K V+ +F+ E L+ +
Sbjct: 176 HTALMEAYGRGRRYNNAEAIFRRMQS-GGPEPSALTYQIMLKTFVEGSKFKEAEELFDSL 234
Query: 242 ---DERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFAN 298
++ + P+ ++++ + KAG +++ +V + M + V T N+++S N
Sbjct: 235 LNKEKPVLKPDQKMFHMIIYMFKKAGNYEKARKVFAEMAARGVPQTTV-TYNSLMSFETN 293
Query: 299 KGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSST 358
+V + Y++ + G+ P+ ++ +LI AYGK R ++ +V
Sbjct: 294 YKEVS---KIYDQMQRAGLQPDVVSYALLISAYGKARREEEALAV--------------- 335
Query: 359 YNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLAS 418
FE+M G++ K + L++ +A +G+ + +
Sbjct: 336 --------------------FEEMLDAGIRPTHKAYNILLDAFAISGMVEQAKIVFKSMK 375
Query: 419 KLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAK 473
+ + + ++ Y ++SA + A D+ E ++R+K+ RP+ T+ + + YAK
Sbjct: 376 RDRCSPDICSYTTMLSAYVNASDMEGAENFFRRLKQDGFRPNVVTYGTLIKGYAK 430
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 130/276 (47%), Gaps = 7/276 (2%)
Query: 126 QALQVFEML--KEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYT 183
+A ++F+ L KE+P +P + + ++ + K+G E ARKVF EM G+ T Y
Sbjct: 226 EAEELFDSLLNKEKPVLKPDQKMFHMIIYMFKKAGNYEKARKVFAEMAARGVPQTTVTYN 285
Query: 184 ALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDE 243
+L++ + + + +QM+ QPDV +Y+ LI A A R E ++++M +
Sbjct: 286 SLMSFETNYKEVSKIY---DQMQR-AGLQPDVVSYALLISAYGKARREEEALAVFEEMLD 341
Query: 244 RSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVD 303
+ P NI+L + +GM +Q + V M + C PD+ + T+LS + N ++
Sbjct: 342 AGIRPTHKAYNILLDAFAISGMVEQAKIVFKSM-KRDRCSPDICSYTTMLSAYVNASDME 400
Query: 304 MMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
E ++ + + G P T+ LI Y K +KM E M+ + ++
Sbjct: 401 GAENFFRRLKQDGFRPNVVTYGTLIKGYAKINNLEKMIKRYEEMKVNGIRVNQTILTTIM 460
Query: 364 EAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLIN 399
+A+ D F ++ + G++ D K L++
Sbjct: 461 DAYGKNKDFGSAVIWFNEIESCGLRPDQKAKNILLS 496
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 103/223 (46%), Gaps = 2/223 (0%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
QP +Y L+ GK+ + E A VF EM++ GI PT + Y LL A+ + ++++A +
Sbjct: 310 QPDVVSYALLISAYGKARREEEALAVFEEMLDAGIRPTHKAYNILLDAFAISGMVEQAKI 369
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
MK C PD+ +Y+T++ A V+A E E ++ + + PN VT ++ GY
Sbjct: 370 VFKSMKR-DRCSPDICSYTTMLSAYVNASDMEGAENFFRRLKQDGFRPNVVTYGTLIKGY 428
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
K ++M + M + + + + TI+ + W+ + + G+ P+
Sbjct: 429 AKINNLEKMIKRYEEM-KVNGIRVNQTILTTIMDAYGKNKDFGSAVIWFNEIESCGLRPD 487
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVI 363
+ NIL+ D+ + ++ Y + P ++ I
Sbjct: 488 QKAKNILLSLAKTAEELDEANQLVGYSSQSSSPQRGGKFSRSI 530
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 139/334 (41%), Gaps = 14/334 (4%)
Query: 140 YQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAF 199
Y P ++ L+ G+ + A +F M G EP+ Y +L + S EA
Sbjct: 169 YAPNVVSHTALMEAYGRGRRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEGSKFKEAE 228
Query: 200 VTLNQM--KTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVL 257
+ + K P +PD + +I A +E ++ +M R V TVT N ++
Sbjct: 229 ELFDSLLNKEKPVLKPDQKMFHMIIYMFKKAGNYEKARKVFAEMAARGVPQTTVTYNSLM 288
Query: 258 G---GYGKAG-MFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFR 313
Y + ++DQM+R A +PDV + ++S + + + +E+
Sbjct: 289 SFETNYKEVSKIYDQMQR--------AGLQPDVVSYALLISAYGKARREEEALAVFEEML 340
Query: 314 NFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAK 373
+ GI P + +NIL+ A+ M ++ V + M++ + +Y ++ A+ + D +
Sbjct: 341 DAGIRPTHKAYNILLDAFAISGMVEQAKIVFKSMKRDRCSPDICSYTTMLSAYVNASDME 400
Query: 374 HMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVI 433
E F ++ +G + + T+ LI GYA K+I I N + ++
Sbjct: 401 GAENFFRRLKQDGFRPNVVTYGTLIKGYAKINNLEKMIKRYEEMKVNGIRVNQTILTTIM 460
Query: 434 SACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
A K D + ++ RPD + +I+
Sbjct: 461 DAYGKNKDFGSAVIWFNEIESCGLRPDQKAKNIL 494
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 86/200 (43%), Gaps = 6/200 (3%)
Query: 292 ILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ 351
+++ + G + E+ G P + L+ AYG+ R Y+ ++ M+
Sbjct: 144 LITAYGKLGDFNRAEKVLNLMNKKGYAPNVVSHTALMEAYGRGRRYNNAEAIFRRMQSGG 203
Query: 352 FPWTSSTYNNVIEAFSDMGDAKHMEYTFEQM---HAEGMKADTKTFCCLINGYANAGLFH 408
++ TY +++ F + K E F+ + +K D K F +I + AG +
Sbjct: 204 PEPSALTYQIMLKTFVEGSKFKEAEELFDSLLNKEKPVLKPDQKMFHMIIYMFKKAGNYE 263
Query: 409 KVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMT 468
K + + + YN+++S + E+ ++Y +M+ +PD +++++
Sbjct: 264 KARKVFAEMAARGVPQTTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 320
Query: 469 EAYAKEGMNDKVYALEQEKL 488
AY K ++ A+ +E L
Sbjct: 321 SAYGKARREEEALAVFEEML 340
>gi|242054943|ref|XP_002456617.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
gi|241928592|gb|EES01737.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
Length = 410
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 146/340 (42%), Gaps = 10/340 (2%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+A +VF+++ P E TY L+ GQ E+ + EM G+EP Y L
Sbjct: 56 EARRVFDVMPRLGV-TPNEVTYTALIHGYFVRGQREMGFALVGEMRRGGVEPNLYTYNCL 114
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERS 245
+ +CR A + ++M L +V +Y+ LI + + L++ M
Sbjct: 115 VGEWCRTGEFKSARLLFDEMP-LKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREG 173
Query: 246 VTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMM 305
+ P+ VT N+++ GYGKAG + M ++A +P V T N ++ F +
Sbjct: 174 IHPSMVTFNLLIDGYGKAGKMSNALHFFNQM-KAAGLQPSVVTYNELIGGFCRARDIAHA 232
Query: 306 ERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEA 365
R + + + P T+ ILIGA+ K+ D+ ++ M K +Y ++ A
Sbjct: 233 IRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHA 292
Query: 366 FSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAEN 425
G H F+ M ++G+K + + +I GY G +K + + K + N
Sbjct: 293 LCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPN 352
Query: 426 VSFYNAVI------SACIKADDLM-EMERVYKRMKEKHCR 458
V+ Y I C +A+ L+ +ME + E CR
Sbjct: 353 VASYCLTIRLLCNEGKCQEAEALIGDMEDAGLQTSESICR 392
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 129/334 (38%), Gaps = 43/334 (12%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
+SG AR+VF+ M G+ P YTAL+ Y + F + +M+ +P++
Sbjct: 50 QSGDVAEARRVFDVMPRLGVTPNEVTYTALIHGYFVRGQREMGFALVGEMRR-GGVEPNL 108
Query: 216 YTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSG 275
YTY+ L+ F+ L+ +M + V N V+ NI++ G
Sbjct: 109 YTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAG---------------- 152
Query: 276 MLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKR 335
G++ + +E R GI P TFN+LI YGK
Sbjct: 153 --------------------LCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKA- 191
Query: 336 MYDKMSSVMEY---MRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTK 392
KMS+ + + M+ + TYN +I F D H F M +
Sbjct: 192 --GKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKV 249
Query: 393 TFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRM 452
T+ LI +A + + K + +V Y ++ A +M ++++ M
Sbjct: 250 TYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSM 309
Query: 453 KEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQE 486
K +P++ + +M Y +EG + K L E
Sbjct: 310 DSKGVKPNNVLYDMMIYGYGREGSSYKALRLIME 343
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 110/304 (36%), Gaps = 36/304 (11%)
Query: 190 CRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPN 249
C + + A L + + DV + L+ C + ++ M VTPN
Sbjct: 13 CAAAEVRSALAVLARGTKSGDAALDVAACTALVHGCCQSGDVAEARRVFDVMPRLGVTPN 72
Query: 250 TVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWY 309
VT ++ GY F +GQ +M
Sbjct: 73 EVTYTALIHGY-----------------------------------FV-RGQREMGFALV 96
Query: 310 EKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDM 369
+ R G++P T+N L+G + + + + + M +YN +I
Sbjct: 97 GEMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRH 156
Query: 370 GDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFY 429
G K FE M EG+ TF LI+GY AG + + +V Y
Sbjct: 157 GKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTY 216
Query: 430 NAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKVYALEQEKLQ 489
N +I +A D+ R + MKE+ P T++I+ A+AKE D+ + + E +
Sbjct: 217 NELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEK 276
Query: 490 MLLE 493
LE
Sbjct: 277 AGLE 280
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 156/385 (40%), Gaps = 42/385 (10%)
Query: 121 KKQWFQALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPE 180
+++ +AL ++E + E +P TY LL+ +G + A K++ EM +G P
Sbjct: 399 RRKIREALNLWEKMNETGV-KPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVV 457
Query: 181 LYTALLAAYCRNSLIDEAFVTLNQMK------------TLPN--------CQ-------- 212
YT L+ + + D+A+ L +MK TL N C+
Sbjct: 458 TYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRF 517
Query: 213 ------PDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMF 266
P TY+++I + A +YQ M + + PN VT + GY K
Sbjct: 518 ETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCC 577
Query: 267 DQMERVLSGMLESATCK---PDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRT 323
D + ML CK PD+ N+++ F +G + + G+ P
Sbjct: 578 DLALK----MLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISV 633
Query: 324 FNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMH 383
+N I Y +M ++ E M K ++TY +I+ FS G+ + +M
Sbjct: 634 YNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMV 693
Query: 384 AEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLM 443
A+G D TF L +G G + ++L I NV YN +I+ ++ L
Sbjct: 694 AKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQ 753
Query: 444 EMERVYKRMKEKHCRPDSETFSIMT 468
E R++ M E+ PD T+ I+
Sbjct: 754 EAFRLHDEMLERKIMPDDTTYDILV 778
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/313 (19%), Positives = 131/313 (41%), Gaps = 3/313 (0%)
Query: 163 ARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLI 222
A +F E + +G+ PT YT L+ + ++A+ QM+ P ++ +I
Sbjct: 301 ALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRD-HGLLPSTNEFNMVI 359
Query: 223 KACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATC 282
K ++ ++ +L+++M + + P+ T NI++ + + + M E+
Sbjct: 360 KGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGV- 417
Query: 283 KPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSS 342
KP + T +++L + G +D + Y + G P T+ L+ + K +DK +
Sbjct: 418 KPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYA 477
Query: 343 VMEYMRKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYA 402
++ M++ TYN +I +G + ++ EG T+ +ING+
Sbjct: 478 LLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFI 537
Query: 403 NAGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSE 462
AG+ + + I N+ Y + I K ++ ++ K RPD
Sbjct: 538 KAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIA 597
Query: 463 TFSIMTEAYAKEG 475
++ + + +EG
Sbjct: 598 AYNSLIYGFCQEG 610
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 145/354 (40%), Gaps = 6/354 (1%)
Query: 126 QALQVFEMLKEQPFYQPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTAL 185
+AL V +++ F P + T+ ++ +L K G+ E A + +E++ G + + L T L
Sbjct: 230 RALLVLRKMQDAGFV-PWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTL 288
Query: 186 LAAYCRNSLIDEAFVTLNQMKTLPN-CQPDVYTYSTLIKACVDAMRFELIETLYQDMDER 244
+ YC + +A + TL + P TY+ LI+ C + E L + M +
Sbjct: 289 MHGYCLQREVRKALDIFEE--TLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346
Query: 245 SVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDM 304
+ P+T N+V+ G ++ + M +S PD +T N ++ + ++
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI--PDAFTYNILIHWLCQRRKIRE 404
Query: 305 MERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYNNVIE 364
+EK G+ P T++ L+ Y D+ + M F TY +++
Sbjct: 405 ALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMK 464
Query: 365 AFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKLQIAE 424
+ +M G+ + T+ LING G +V ++
Sbjct: 465 GHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVP 524
Query: 425 NVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMND 478
YN++I+ IKA + VY++M K P+ T++ + Y K D
Sbjct: 525 TAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCD 578
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/366 (18%), Positives = 146/366 (39%), Gaps = 38/366 (10%)
Query: 156 KSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDV 215
K G + A ++F+EM IEP + + +A+ C+ + A + L +M+ P
Sbjct: 189 KEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQD-AGFVPWD 247
Query: 216 YTYSTLIKACVDAMRF--------ELIET---------------------------LYQD 240
+T+++++ V R EL+ T ++++
Sbjct: 248 FTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEE 307
Query: 241 MDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKG 300
+ P VT +++ G + GM ++ + M + P N ++ N
Sbjct: 308 TLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLL-PSTNEFNMVIKGLLNDK 366
Query: 301 QVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTSSTYN 360
+++ + GI P+ T+NILI ++R + ++ E M + TY+
Sbjct: 367 LWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYH 425
Query: 361 NVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLASKL 420
+++ + G + +M +G + T+ L+ G+ N F K + + +
Sbjct: 426 SLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQN 485
Query: 421 QIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMNDKV 480
++ N YN +I+ + E+ + KR + + P + T++ + + K GM
Sbjct: 486 GVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSA 545
Query: 481 YALEQE 486
+A+ Q+
Sbjct: 546 FAVYQQ 551
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/198 (18%), Positives = 82/198 (41%), Gaps = 6/198 (3%)
Query: 285 DVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVM 344
D W + ++ +G D R +++ I+P+ R ++ I + K R ++ V+
Sbjct: 176 DAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVL 235
Query: 345 EYMRKLQF-PWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYAN 403
M+ F PW T+N+V++ G + + +++ A G K L++GY
Sbjct: 236 RKMQDAGFVPW-DFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCL 294
Query: 404 AGLFHKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSET 463
K + + + Y +I C + + + ++M++ P +
Sbjct: 295 QREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNE 354
Query: 464 FSIMTEAYAKEGMNDKVY 481
F+++ + +NDK++
Sbjct: 355 FNMVIKGL----LNDKLW 368
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 126/270 (46%), Gaps = 8/270 (2%)
Query: 141 QPKEGTYMKLLVLLGKSGQPELARKVFNEMVEEGIEPTPELYTALLAAYCRNSLIDEAFV 200
+P TY L+ K G+ E AR V +EM +G+ Y L++A C++ + +A
Sbjct: 46 EPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALN 105
Query: 201 TLNQMKTLPNCQPDVYTYSTLIKACVDAMRFELIETLYQDMDERSVTPNTVTQNIVLGGY 260
M + C+PD++T+++LI +FE LYQDM V NT+T N ++ +
Sbjct: 106 MFGDMSS-KGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAF 164
Query: 261 GKAGMFDQMERVLSGMLESATCKPDVWTMNTILSVFANKGQVDMMERWYEKFRNFGIDPE 320
+ G + ++++ ML C D T N ++ G ++ +E + G++P
Sbjct: 165 LRRGAMQEALKLVNDMLFRG-CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPN 223
Query: 321 TRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTS---STYNNVIEAFSDMGDAKHMEY 377
+ NILI + + +E++R + + TYN++I G A+
Sbjct: 224 NISCNILINGLCRT---GNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALN 280
Query: 378 TFEQMHAEGMKADTKTFCCLINGYANAGLF 407
F+++ EG+ D T+ LI+ + G+F
Sbjct: 281 LFDKLQVEGICPDAITYNTLISWHCKEGMF 310
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 140/316 (44%), Gaps = 6/316 (1%)
Query: 170 MVEEGIEPTPELYTALLAAYCRNSLIDEAFVTLNQMKTLPNCQPDVYTYSTLIKACVDAM 229
M+ G P Y L+ C+ + A +N+M+ + C+P+V TY+ LI
Sbjct: 5 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQ-IKGCEPNVITYTILIDRFCKEG 63
Query: 230 RFELIETLYQDMDERSVTPNTVTQNIVLGGYGKAGMFDQMERVLS--GMLESATCKPDVW 287
R E + +M + + N V N ++ K ++++ L+ G + S CKPD++
Sbjct: 64 RLEEARNVLDEMSGKGLALNAVGYNCLISALCKD---EKVQDALNMFGDMSSKGCKPDIF 120
Query: 288 TMNTILSVFANKGQVDMMERWYEKFRNFGIDPETRTFNILIGAYGKKRMYDKMSSVMEYM 347
T N+++ + + Y+ G+ T T+N LI A+ ++ + ++ M
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 180
Query: 348 RKLQFPWTSSTYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLF 407
P TYN +I+A G+ + FE M ++G+ + + LING G
Sbjct: 181 LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNI 240
Query: 408 HKVISSVRLASKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIM 467
+ +R + ++ YN++I+ K E ++ +++ + PD+ T++ +
Sbjct: 241 QHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTL 300
Query: 468 TEAYAKEGMNDKVYAL 483
+ KEGM D + L
Sbjct: 301 ISWHCKEGMFDDAHLL 316
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 3/137 (2%)
Query: 358 TYNNVIEAFSDMGDAKHMEYTFEQMHAEGMKADTKTFCCLINGYANAGLFHKVISSVRLA 417
TYN +I G +M +G + + T+ LI+ + G + + +
Sbjct: 16 TYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEM 75
Query: 418 SKLQIAENVSFYNAVISACIKADDLMEMERVYKRMKEKHCRPDSETFSIMTEAYAKEGMN 477
S +A N YN +ISA K + + + ++ M K C+PD TF+ + K
Sbjct: 76 SGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKF 135
Query: 478 DKVYALEQEKLQMLLEA 494
++ L Q+ MLLE
Sbjct: 136 EEALGLYQD---MLLEG 149
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.130 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,479,045,252
Number of Sequences: 23463169
Number of extensions: 298768742
Number of successful extensions: 956564
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5210
Number of HSP's successfully gapped in prelim test: 5973
Number of HSP's that attempted gapping in prelim test: 801581
Number of HSP's gapped (non-prelim): 64511
length of query: 502
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 355
effective length of database: 8,910,109,524
effective search space: 3163088881020
effective search space used: 3163088881020
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)