Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>010741
MMMIESTLAVRFPAGSNFCSSAALSHSRSICHAEDVTGVHVTSRRPFPSGCSNVPWNRFR
RVNGNPCVTRSNVTKKRIQASASDPVKKNERTSYHPFEDIADSTLKNGEEARLTAAETSR
TIIEVNSTATLMFTDFTNGGAHENIIWPDLPYVTDEHGNIYIQVKNEEDILQSLISENNF
VQVIIGFDTTEMIKEMELAGLSEIDFGIDEIDDEDSDVEDEDEDEDEDEEDEDYDENWVN
VLEDEDDEDEMLGDWAKLETMRSSHPMYFAKKLSEVISDDPIDWMEQPPAGITIQGLLRP
ALIEEHSDIQRHRSSNQYHDVDNSKNVVVGNNQEDLHVINGHRNESEPSRNGSEESKKDD
KPMNGTSFYKLEMTKIQPILAHAHQAAVDIEDYRKAQPDVIAHSAANIISRLKAGGEKTT
QALKSLCWRTKGIQVEEEAVIGVDSIGFDLRVCAGTQIQTLRFAFNTRATSEYSAERQLN
DLLFPRIHQKPQKRKQTYQNEC

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  010741
        (502 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2081182 - symbol:AT3G59300 "AT3G59300" species...   294  1.4e-50   3


>TAIR|locus:2081182 [details] [associations]
            symbol:AT3G59300 "AT3G59300" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR012349 EMBL:CP002686
            GenomeReviews:BA000014_GR SUPFAM:SSF50475 UniGene:At.19766
            UniGene:At.66534 EMBL:AY050863 EMBL:AY091205 IPI:IPI00525891
            RefSeq:NP_567080.1 ProteinModelPortal:Q949V7 SMR:Q949V7
            IntAct:Q949V7 EnsemblPlants:AT3G59300.1 GeneID:825099
            KEGG:ath:AT3G59300 TAIR:At3g59300 HOGENOM:HOG000082760
            InParanoid:Q949V7 OMA:PIYFAKC PhylomeDB:Q949V7
            ProtClustDB:CLSN2689234 ArrayExpress:Q949V7 Genevestigator:Q949V7
            Uniprot:Q949V7
        Length = 459

 Score = 294 (108.6 bits), Expect = 1.4e-50, Sum P(3) = 1.4e-50
 Identities = 58/149 (38%), Positives = 98/149 (65%)

Query:   345 ESEPSRNGSEESKKDDKPMNGTSFYKLEMTKIQPILAHAHQAAVDIEDYRKAQPDVIAHS 404
             E +   N    S++D+  M+ +S Y+LE+  I+ +  +  ++++ ++D++ A+PD++ HS
Sbjct:   302 EVQGDDNPITSSRRDENDMS-SSLYRLEIVGIELLSLYGAESSISLQDFQDAEPDILVHS 360

Query:   405 AANIISRLKAGGEKTTQALKSLCWRTKGIQVEEEAVIGVDSIGFDLRVCAGTQIQTLRFA 464
              + II R    G  ++ ALK+LC + KG+  EE  +I VDS+G D+RV AG Q+QT RF 
Sbjct:   361 TSAIIERFNNRGINSSIALKALC-KKKGLHAEEANLISVDSLGMDVRVFAGAQVQTHRFP 419

Query:   465 FNTRATSEYSAERQLNDLLFPRIHQKPQK 493
             F TRAT+E +AE++++ LLFPR  ++  K
Sbjct:   420 FKTRATTEMAAEKKIHQLLFPRSRRRKLK 448

 Score = 186 (70.5 bits), Expect = 1.4e-50, Sum P(3) = 1.4e-50
 Identities = 39/116 (33%), Positives = 67/116 (57%)

Query:    73 VTKKRIQASASDPVKKNERTSYHPFEDIADSTLKNGEEARLTAAETSRTIIEVNSTATLM 132
             +TK  + A  SD V  +    YHP ED+  S  K  +E +L+A+E +RT +E NS+A L+
Sbjct:    76 LTKVSVAADYSDSVPDSSFYGYHPLEDLKPS--KRVQETKLSASEVARTTVEANSSAVLV 133

Query:   133 FTDFTNGGAHENIIWPDLPYVTDEHGNIYIQVKNEEDILQSLISENNFVQVIIGFD 188
             F    +   H++  W +  YV D++G+I+ ++ ++E+IL+     +N V+   G D
Sbjct:   134 FPGAIHCEPHDHNSWSEFKYVIDDYGDIFFEIPDDENILEDP-GASNPVKAFFGMD 188

 Score = 132 (51.5 bits), Expect = 1.4e-50, Sum P(3) = 1.4e-50
 Identities = 36/96 (37%), Positives = 52/96 (54%)

Query:   254 DWAKLETMRSSHPMYFAKKLSEVISDDPIDWMEQPPAGITIQGLLRPALIEEHSDIQRHR 313
             DW   +T    HP+YFAK LS+ IS D    M+ P  G++I G LRPA ++E S I+R  
Sbjct:   232 DWGMPDTSNGVHPIYFAKHLSKAISMDYDRKMDYPSNGVSILGCLRPAFLDEESYIRRLF 291

Query:   314 SSNQYHDVDNSKNVVVGNNQEDLHVINGHRNESEPS 349
              S    D D+    V G   +D  + +  R+E++ S
Sbjct:   292 LSE---DRDDYSWEVQG---DDNPITSSRRDENDMS 321


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.130   0.379    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      502       460   0.00095  118 3  11 22  0.42    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  616 (65 KB)
  Total size of DFA:  284 KB (2148 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  41.39u 0.14s 41.53t   Elapsed:  00:00:02
  Total cpu time:  41.39u 0.14s 41.53t   Elapsed:  00:00:02
  Start:  Sat May 11 07:47:31 2013   End:  Sat May 11 07:47:33 2013

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