Query 010741
Match_columns 502
No_of_seqs 149 out of 302
Neff 3.8
Searched_HMMs 29240
Date Mon Mar 25 13:17:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010741.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010741hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dnh_A Uncharacterized protein 100.0 3.1E-30 1.1E-34 250.0 16.8 230 108-485 21-254 (258)
2 2arz_A Hypothetical protein PA 100.0 1.9E-29 6.3E-34 239.3 17.7 232 110-486 3-237 (247)
3 3gas_A Heme oxygenase; FMN-bin 99.5 6E-14 2.1E-18 137.3 8.6 74 406-485 3-77 (259)
4 3swj_A CHUZ, putative uncharac 99.4 8.9E-14 3.1E-18 134.9 7.7 74 405-485 3-77 (251)
5 1xhn_A CREG, cellular represso 99.1 2.2E-10 7.6E-15 104.8 11.3 162 109-398 13-183 (184)
6 3gas_A Heme oxygenase; FMN-bin 98.7 7.9E-09 2.7E-13 101.2 3.8 71 289-397 164-239 (259)
7 3swj_A CHUZ, putative uncharac 98.6 3E-08 1E-12 96.2 4.6 73 290-397 165-239 (251)
8 3tgv_A Heme-binding protein HU 98.1 9.9E-07 3.4E-11 78.4 2.6 59 289-385 79-141 (148)
9 1vl7_A Hypothetical protein AL 96.9 0.00047 1.6E-08 60.9 3.5 65 114-185 18-83 (157)
10 2hq7_A Protein, related to gen 78.4 2 6.8E-05 36.2 4.2 22 364-385 115-136 (146)
11 2fhq_A Putative general stress 63.4 12 0.00039 31.2 5.5 22 363-385 114-135 (141)
12 3ec6_A General stress protein 54.6 40 0.0014 28.3 7.4 21 363-383 110-130 (139)
13 2asf_A Hypothetical protein RV 53.5 29 0.00099 29.1 6.4 54 290-383 80-134 (137)
14 3db0_A LIN2891 protein; putati 48.4 29 0.001 28.5 5.5 50 130-185 19-68 (128)
15 2iab_A Hypothetical protein; N 39.0 71 0.0024 27.6 6.8 20 364-383 119-138 (155)
16 2hti_A BH0577 protein; structu 35.5 15 0.0005 32.9 1.8 68 109-184 8-75 (185)
17 1vl7_A Hypothetical protein AL 31.0 26 0.00091 30.3 2.6 59 290-384 97-157 (157)
18 3f7e_A Pyridoxamine 5'-phospha 28.6 1.4E+02 0.0047 24.6 6.6 29 288-316 73-101 (131)
19 2i02_A General stress protein 26.7 85 0.0029 26.3 5.0 53 129-184 23-76 (148)
20 1rfe_A Hypothetical protein RV 22.8 44 0.0015 28.4 2.5 69 109-185 6-74 (162)
21 1wmh_B Partitioning defective- 22.8 83 0.0028 26.4 4.0 32 153-185 52-83 (86)
22 3ju0_A Phage integrase; four s 20.8 91 0.0031 26.5 4.0 46 444-489 22-81 (108)
No 1
>3dnh_A Uncharacterized protein ATU2129; APC6114, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2, protein structure initiative; 1.94A {Agrobacterium tumefaciens}
Probab=99.97 E-value=3.1e-30 Score=249.96 Aligned_cols=230 Identities=15% Similarity=0.109 Sum_probs=176.7
Q ss_pred CcCCcCchhhccceEEEEcCeeEEEEeeeccCccccccccCCCCeeeccCCCEEEEecCchhHhhhhccCCCceEEEEec
Q 010741 108 GEEARLTAAETSRTIIEVNSTATLMFTDFTNGGAHENIIWPDLPYVTDEHGNIYIQVKNEEDILQSLISENNFVQVIIGF 187 (502)
Q Consensus 108 ~~~~~lt~ae~aRTivE~N~ka~l~~~~~v~~e~H~~i~w~e~~y~~D~~Gdiyfqv~~d~~il~~~~~~~n~v~v~iG~ 187 (502)
..++....++.||+++.-+..|+|---.-....||-... +|+.|+.|.+||-+.....=.+.+. .|.-|.+.|.-
T Consensus 21 ~~p~~~~~~~~ar~lL~~~~~g~LaTv~~~dG~P~~s~v----~y~~d~~g~~~~~~s~~~~h~~NL~-~dprvSl~V~~ 95 (258)
T 3dnh_A 21 SAGAPFEAVRVARDVLHTSRTAALATLDPVSGYPYTTAT----NIGIEPDGTPFFFAAGLTLHARNME-TDARISVTLAP 95 (258)
T ss_dssp -----CCHHHHHHHHHHHCCEEEEEEECTTTCCEEEEEE----ECEECTTSCEEEEEETTSHHHHHHH-HCCEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHhCCEEEEEeccCCCCceEEEEE----EEEECCCCCEEEEEeCCcHHHHHHh-hCCCEEEEEec
Confidence 466777889999999999988887643323555666554 5889988999998887655555553 34445554431
Q ss_pred chhHHHHhhhhccccccccccccCCCCCCCCCCCCCCccCccccccccccceecccCccccccccCcccccccccccchh
Q 010741 188 DTTEMIKEMELAGLSEIDFGIDEIDDEDSDVEDEDEDEDEDEEDEDYDENWVNVLEDEDDEDEMLGDWAKLETMRSSHPM 267 (502)
Q Consensus 188 d~~~~~~e~~~~~~s~~df~~~~~~~edsd~ed~~~~d~~~~~d~dy~~~~~~v~~d~~~~~~~l~dW~~~eT~~~~HP~ 267 (502)
+. .
T Consensus 96 ~~-------------------------------------------~---------------------------------- 98 (258)
T 3dnh_A 96 FG-------------------------------------------K---------------------------------- 98 (258)
T ss_dssp GG-------------------------------------------G----------------------------------
T ss_pred CC-------------------------------------------C----------------------------------
Confidence 00 0
Q ss_pred HHHHHHHHHhcCCcccccCCCCCeeEEEEEeeeccccchhhHHHHhhccccC-CCCCCccccccCCccccccccCCCCCC
Q 010741 268 YFAKKLSEVISDDPIDWMEQPPAGITIQGLLRPALIEEHSDIQRHRSSNQYH-DVDNSKNVVVGNNQEDLHVINGHRNES 346 (502)
Q Consensus 268 yFak~l~~~~~~~~~~~md~P~~~lsI~G~lrpa~~eE~s~ir~~~~~~~~~-~~y~s~~~~~~~~~e~~~~i~~~~~~~ 346 (502)
.+++ ...||+|+|.++++..+|...++++|+.+|.. ..+ .
T Consensus 99 --------------~d~~--~~~rvtl~G~a~~v~~~e~~~l~~~y~~rhP~a~~~----~------------------- 139 (258)
T 3dnh_A 99 --------------GDAL--TLPRLTLVGRADRIGPDEVPLAIARYIARYPKAKLY----L------------------- 139 (258)
T ss_dssp --------------SCGG--GSCEEEEEEEEEECCGGGHHHHHHHHHHHCTTHHHH----T-------------------
T ss_pred --------------CChh--hCCeEEEEEEEEEcCchHHHHHHHHHHHHCcChHHc----c-------------------
Confidence 0011 13689999999999988889999999999832 223 1
Q ss_pred CCCCCCCcccccCCCCCCCeEEEEEEeeeEEEEcCCcc-ceeeCHhhhhh--cCCchhhhhhHHHHHHHhcCChhhHHHH
Q 010741 347 EPSRNGSEESKKDDKPMNGTSFYKLEMTKIQPILAHAH-QAAVDIEDYRK--AQPDVIAHSAANIISRLKAGGEKTTQAL 423 (502)
Q Consensus 347 d~s~~g~~~~~~~~~~~~DFsFYRLe~erIrLIGGFGr-a~wVd~eDy~a--AePDpLAasEa~IIeHMNeDHadavdAL 423 (502)
.++||.||||++++++|+||||+ ++||+++||.+ |+||+|++.+++||+|||+|| +++
T Consensus 140 ---------------~~~df~l~rl~~~~v~~v~GFG~~a~~v~~~d~~~~~a~~d~l~~~~~~ii~hmN~dH-d~l--- 200 (258)
T 3dnh_A 140 ---------------SLPDTRLYRLRTEGVQINGGPARNASNITPADLRTDLSGAEELMAAAESEATRLNAIK-GEA--- 200 (258)
T ss_dssp ---------------SSTTEEEEEEEEEEEEEEC------CCCCHHHHSCCCTTCHHHHHHHHHHHHHHHTST-THH---
T ss_pred ---------------cCCCeEEEEEEEeEEEEEcccCcccccCCHHHhcccCCCCchhHHHHHHHHHHHHhhH-HHH---
Confidence 15899999999999999999999 99999999999 889999999999999999999 877
Q ss_pred HHHHHHhcCCCCCceEEEeecCCCceEEEecCCcceEEEEecCCCCCCHHHHHHHHHHHcCc
Q 010741 424 KSLCWRTKGIQVEEEAVIGVDSIGFDLRVCAGTQIQTLRFAFNTRATSEYSAERQLNDLLFP 485 (502)
Q Consensus 424 ~~~a~~~~G~~ve~ArmiGVDrlGfDLRV~sG~~~r~lR~pFp~patd~~dARkaLveLL~p 485 (502)
.+||+ +.|+.+++|+|+|||++|||||+ | .+.+||+|+ ++.+++|++|++|+..
T Consensus 201 ~~~~~-~~~~~~~~a~~~~vD~~G~dl~~--~--~~~~Ri~F~---~d~~~~r~~lv~m~~~ 254 (258)
T 3dnh_A 201 SRLAV-LAGAKTGRWKITSIDPDGIDLAS--A--SDLARLWFA---ERVETLKQFEKALAQL 254 (258)
T ss_dssp HHHHH-HTTCCCSSCEEEEEETTEEEEEC--S--SCEEEEECS---SCCCSHHHHHHHHHHH
T ss_pred HHHHH-hCCCCCCcEEEEEEccCcCEEEE--C--CEEEEeeCC---CCHHHHHHHHHHHHHH
Confidence 88999 88888899999999999999997 3 379999999 8999999999999864
No 2
>2arz_A Hypothetical protein PA4388; hypothetical protein,structural genomics,MCSG, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa} SCOP: b.45.1.1
Probab=99.96 E-value=1.9e-29 Score=239.32 Aligned_cols=232 Identities=15% Similarity=0.134 Sum_probs=182.1
Q ss_pred CCcCchhhccceEEEEcCeeEEEEeee-ccCccccccccCCCCeeeccCCCEEEEecCchhHhhhhccCCCceEEEEecc
Q 010741 110 EARLTAAETSRTIIEVNSTATLMFTDF-TNGGAHENIIWPDLPYVTDEHGNIYIQVKNEEDILQSLISENNFVQVIIGFD 188 (502)
Q Consensus 110 ~~~lt~ae~aRTivE~N~ka~l~~~~~-v~~e~H~~i~w~e~~y~~D~~Gdiyfqv~~d~~il~~~~~~~n~v~v~iG~d 188 (502)
+...+.++.+|++++-+..++|---+- ....||-... .|+.|..|.+||-+.....-.+.+. .|.-|.+.|.
T Consensus 3 ~~~~~~~~~~r~ll~~~~~~~LaT~~~~~dG~P~~s~v----~~~~d~~g~~~f~~s~~s~k~~nl~-~nprvsl~v~-- 75 (247)
T 2arz_A 3 SMSVEAAKNARELLLKEYRAVLSTHSKKWPGFPFGSVV----PYCLDAEGRPLILISRIAQHTHNLQ-ADPRCSMLVG-- 75 (247)
T ss_dssp --CHHHHHHHHHHHHHCSEEEEEEECSSSTTCEEEEEE----ECEECTTSCEEEEEETTSHHHHHHH-HCCEEEEEEE--
T ss_pred CCChHHHHHHHHHHHhCCEEEEEEcCCCCCCcceEEEE----EEEECCCCCEEEEEeChhHHHHHHH-hCCCeEEEEe--
Confidence 345567888999988777666543321 1456776655 4888989999999998877777764 5555665551
Q ss_pred hhHHHHhhhhccccccccccccCCCCCCCCCCCCCCccCccccccccccceecccCccccccccCcccccccccccchhH
Q 010741 189 TTEMIKEMELAGLSEIDFGIDEIDDEDSDVEDEDEDEDEDEEDEDYDENWVNVLEDEDDEDEMLGDWAKLETMRSSHPMY 268 (502)
Q Consensus 189 ~~~~~~e~~~~~~s~~df~~~~~~~edsd~ed~~~~d~~~~~d~dy~~~~~~v~~d~~~~~~~l~dW~~~eT~~~~HP~y 268 (502)
.+ + .+
T Consensus 76 ~~------------------------------~-----------~~---------------------------------- 80 (247)
T 2arz_A 76 ER------------------------------G-----------AE---------------------------------- 80 (247)
T ss_dssp CT------------------------------T-----------CS----------------------------------
T ss_pred cC------------------------------C-----------CC----------------------------------
Confidence 01 0 00
Q ss_pred HHHHHHHHhcCCcccccCCCCCeeEEEEEeeeccccchhhHHHHhhccccC-CCCCCccccccCCccccccccCCCCCCC
Q 010741 269 FAKKLSEVISDDPIDWMEQPPAGITIQGLLRPALIEEHSDIQRHRSSNQYH-DVDNSKNVVVGNNQEDLHVINGHRNESE 347 (502)
Q Consensus 269 Fak~l~~~~~~~~~~~md~P~~~lsI~G~lrpa~~eE~s~ir~~~~~~~~~-~~y~s~~~~~~~~~e~~~~i~~~~~~~d 347 (502)
+++. -.+|+|.|.++++..+|...++.+|..++.. ..| .
T Consensus 81 --------------~~~~--~~~v~l~G~a~~v~d~e~~~~~~~~~~~~P~~~~~----~-------------------- 120 (247)
T 2arz_A 81 --------------DIQA--VGRLTLLAEARQLAEEEVAAAAERYYRYFPESADY----H-------------------- 120 (247)
T ss_dssp --------------STTS--SCEEEEEEEEEECCHHHHHHHHHHHHHHCGGGTTC----B--------------------
T ss_pred --------------Chhh--CceEEEEEEEEECCcHHHHHHHHHHHHHCcChhhc----c--------------------
Confidence 0011 3589999999999865567889999887732 222 1
Q ss_pred CCCCCCcccccCCCCCCCeEEEEEEeeeEEEEcCCccceeeCHhhhhhcCCchhhh-hhHHHHHHHhcCChhhHHHHHHH
Q 010741 348 PSRNGSEESKKDDKPMNGTSFYKLEMTKIQPILAHAHQAAVDIEDYRKAQPDVIAH-SAANIISRLKAGGEKTTQALKSL 426 (502)
Q Consensus 348 ~s~~g~~~~~~~~~~~~DFsFYRLe~erIrLIGGFGra~wVd~eDy~aAePDpLAa-sEa~IIeHMNeDHadavdAL~~~ 426 (502)
..+||.||||++++++|++|||+++||++++|.+| ||++. .+++||+|||+||+ ++|.+|
T Consensus 121 --------------~~~~~~l~rl~~~~~~~~~gfG~~~~v~~~~~~~a--dp~~~~~~~~ii~hmN~dH~---~~l~~~ 181 (247)
T 2arz_A 121 --------------RVHDFDFWVLQPVQWRFIGGFGAIHWLAAERVPLA--NPFAGEAERGMVEHMNSDHA---AAIAHY 181 (247)
T ss_dssp --------------TTBBEEEEEEEEEEEEEECTTCCEEEEETTTSCCC--CTTTTHHHHHHHHHHHHHCH---HHHHHH
T ss_pred --------------cccCcEEEEEEEEEEEEEcCCCceEEeChhhhccc--hhhhhhhHHHHHHHHHHHHH---HHHHHH
Confidence 14789999999999999999999999999999988 99998 99999999999999 666999
Q ss_pred HHHhcCCCCCceEEEeecCCCceEEEecCCcceEEEEecCCCCCCHHHHHHHHHHHcCcc
Q 010741 427 CWRTKGIQVEEEAVIGVDSIGFDLRVCAGTQIQTLRFAFNTRATSEYSAERQLNDLLFPR 486 (502)
Q Consensus 427 a~~~~G~~ve~ArmiGVDrlGfDLRV~sG~~~r~lR~pFp~patd~~dARkaLveLL~pr 486 (502)
|+++.|+..+.|+|+|||++|||||+. + +.+||+|++|+++..++|++|++|+..-
T Consensus 182 ~~~~~~~~~~~~~~~~iD~~G~~l~~~--~--~~~Ri~F~~~~~~~~~~~~~l~~m~~~a 237 (247)
T 2arz_A 182 VELAGLPAHAAAQLAGIDTEGFHLRIG--Q--GLHWLPFPAACGNPGAVRQALVQLARAE 237 (247)
T ss_dssp HHHHCCCCSSCCEEEEECSSEEEEEET--T--EEEEEECSSCCCSHHHHHHHHHHHHHCS
T ss_pred HHHhCCCCccceEEEEEccCCCEEEEC--C--EEEEEeCCCcCCCHHHHHHHHHHHHHHh
Confidence 999988877889999999999999983 2 7899999999999999999999999874
No 3
>3gas_A Heme oxygenase; FMN-binding split barrel, oxidoreductase; HET: HEM; 1.80A {Helicobacter pylori}
Probab=99.47 E-value=6e-14 Score=137.33 Aligned_cols=74 Identities=24% Similarity=0.261 Sum_probs=66.8
Q ss_pred HHHHHHHhcCChhhHHHHHHHHHHhcCCC-CCceEEEeecCCCceEEEecCCcceEEEEecCCCCCCHHHHHHHHHHHcC
Q 010741 406 ANIISRLKAGGEKTTQALKSLCWRTKGIQ-VEEEAVIGVDSIGFDLRVCAGTQIQTLRFAFNTRATSEYSAERQLNDLLF 484 (502)
Q Consensus 406 a~IIeHMNeDHadavdAL~~~a~~~~G~~-ve~ArmiGVDrlGfDLRV~sG~~~r~lR~pFp~patd~~dARkaLveLL~ 484 (502)
++||+|||+||+ ++|.+||+++.|+. ++.|+|+|||++||||++ | +.+.+||+|++|+++++++|++|++|+.
T Consensus 3 ~~ii~HMN~DH~---dal~~y~~~~~~~~~~~~a~m~~iD~~G~~l~~--~-~~~~~ri~F~~~~~~~~~~r~~lV~m~~ 76 (259)
T 3gas_A 3 NRIIEHMNAHHV---EDMKGLLKKFGQVHHAENVAFKSVDSQGIVIGY--N-NNQTLRIEFNHEVKDPKDYKNATIELCQ 76 (259)
T ss_dssp HHHHHHHHHHCH---HHHHHHHHHHHCCCSCCSCEEEEEETTEEEEEE--T-TTEEEEEECSSCCCCGGGHHHHHHHHHH
T ss_pred hHHHHHHHHhhH---HHHHHHHHHhCCCCCCCceEEEEEecCccEEEE--C-CceEEEEeCCCcCCCHHHHHHHHHHHHH
Confidence 579999999999 56699999998884 679999999999999988 3 2489999999999999999999999986
Q ss_pred c
Q 010741 485 P 485 (502)
Q Consensus 485 p 485 (502)
.
T Consensus 77 ~ 77 (259)
T 3gas_A 77 S 77 (259)
T ss_dssp H
T ss_pred H
Confidence 5
No 4
>3swj_A CHUZ, putative uncharacterized protein; heme oxygenase, bacterial iron aquisition, heme bindin; HET: HEM; 2.41A {Campylobacter jejuni}
Probab=99.45 E-value=8.9e-14 Score=134.92 Aligned_cols=74 Identities=27% Similarity=0.401 Sum_probs=64.1
Q ss_pred hHHHHHHHhcCChhhHHHHHHHHHHhcCCC-CCceEEEeecCCCceEEEecCCcceEEEEecCCCCCCHHHHHHHHHHHc
Q 010741 405 AANIISRLKAGGEKTTQALKSLCWRTKGIQ-VEEEAVIGVDSIGFDLRVCAGTQIQTLRFAFNTRATSEYSAERQLNDLL 483 (502)
Q Consensus 405 Ea~IIeHMNeDHadavdAL~~~a~~~~G~~-ve~ArmiGVDrlGfDLRV~sG~~~r~lR~pFp~patd~~dARkaLveLL 483 (502)
-++||+|||+||+ ++|.+||+++.|+. ++.|+|++||++||||++ | +...+||+|++|+ +++++|++|++|+
T Consensus 3 ~~~i~~HMN~DH~---d~~~~~a~~~~~~~~~~~~~~~~iD~~g~~l~~--~-~~~~~ri~F~~~~-~~~~~r~~lv~m~ 75 (251)
T 3swj_A 3 FESIISHMNDHHK---SNLVDLCKKFGGIEQVQDVFLKSVDFNGLDLVY--N-DKENLRVEFPKKA-DENTIKDTIISLC 75 (251)
T ss_dssp THHHHHHHHHSCS---HHHHHHHHHHTCCSCCC-CEEEEEETTEEEEEC------CEEEEECSSCC-CTTTHHHHHHHHH
T ss_pred HHHHHHHHHHhHH---HHHHHHHHHhCCCCCCCeeEEEEEecccCEEEe--C-CceEEEEeCCCCC-CHHHHHHHHHHHH
Confidence 3589999999999 56699999998884 789999999999999987 2 2479999999999 9999999999998
Q ss_pred Cc
Q 010741 484 FP 485 (502)
Q Consensus 484 ~p 485 (502)
..
T Consensus 76 ~~ 77 (251)
T 3swj_A 76 MS 77 (251)
T ss_dssp HH
T ss_pred Hh
Confidence 65
No 5
>1xhn_A CREG, cellular repressor of E1A-stimulated genes; beta-barrel, unknown function; HET: MSE; 1.95A {Homo sapiens} SCOP: b.45.1.1
Probab=99.14 E-value=2.2e-10 Score=104.80 Aligned_cols=162 Identities=17% Similarity=0.154 Sum_probs=115.5
Q ss_pred cCCcCchhhccceEEEEcCeeEEEEeee---ccCccccccccCCCCeee----ccCCCEEEEecCchhHhhhhccCCCce
Q 010741 109 EEARLTAAETSRTIIEVNSTATLMFTDF---TNGGAHENIIWPDLPYVT----DEHGNIYIQVKNEEDILQSLISENNFV 181 (502)
Q Consensus 109 ~~~~lt~ae~aRTivE~N~ka~l~~~~~---v~~e~H~~i~w~e~~y~~----D~~Gdiyfqv~~d~~il~~~~~~~n~v 181 (502)
-+.+++.++.||+++.-+.-++|-.-.- +...|+-...| |+. |+.|.|||-+.....=.+.+. .|+-|
T Consensus 13 ~~~~~~~~~~ar~ll~~~~~g~LaTi~~~~~~dG~P~~s~v~----~~~~~~~d~~g~~~f~~s~~~~~~~nl~-~nprv 87 (184)
T 1xhn_A 13 LPPREDAARVARFVTHVSDWGALATISTLEAVRGRPFADVLS----LSDGPPGAGSGVPYFYLSPLQLSVSNLQ-ENPYA 87 (184)
T ss_dssp CCCTTCHHHHHHHHHHHCSEEEEEEECCCGGGTTCEEEEEEE----CBSCSTTCCCSCCEEEECTTSHHHHHHH-HCCEE
T ss_pred CCCChHHHHHHHHHHHhCCEEEEEecccCCCCCCcceEEEEE----EEeccCcCCCCCEEEEEeCccHhHHHHh-hCCCE
Confidence 4567889999999999888777754321 14566666654 565 677999999999887777765 56667
Q ss_pred EEEEecchhHHHHhhhhccccccccccccCCCCCCCCCCCCCCccCccccccccccceecccCccccccccCcccccccc
Q 010741 182 QVIIGFDTTEMIKEMELAGLSEIDFGIDEIDDEDSDVEDEDEDEDEDEEDEDYDENWVNVLEDEDDEDEMLGDWAKLETM 261 (502)
Q Consensus 182 ~v~iG~d~~~~~~e~~~~~~s~~df~~~~~~~edsd~ed~~~~d~~~~~d~dy~~~~~~v~~d~~~~~~~l~dW~~~eT~ 261 (502)
.+.|.-+...
T Consensus 88 Sl~v~~~~~~---------------------------------------------------------------------- 97 (184)
T 1xhn_A 88 TLTMTLAQTN---------------------------------------------------------------------- 97 (184)
T ss_dssp EEEEEGGGTT----------------------------------------------------------------------
T ss_pred EEEEecCCCc----------------------------------------------------------------------
Confidence 7776433220
Q ss_pred cccchhHHHHHHHHHhcCCcccccCCC-CCeeEEEEEeeeccccchhhHHHHhhccccCC-CCCCccccccCCccccccc
Q 010741 262 RSSHPMYFAKKLSEVISDDPIDWMEQP-PAGITIQGLLRPALIEEHSDIQRHRSSNQYHD-VDNSKNVVVGNNQEDLHVI 339 (502)
Q Consensus 262 ~~~HP~yFak~l~~~~~~~~~~~md~P-~~~lsI~G~lrpa~~eE~s~ir~~~~~~~~~~-~y~s~~~~~~~~~e~~~~i 339 (502)
|+.|+ ..++ ++ | -.||+|.|.++++..+|...++++|+.++... .+ .
T Consensus 98 ------~~~~~-----~~dp---~~-~~~~rvtl~G~a~~v~d~e~~~~~~~~~~~hP~~~~~----~------------ 146 (184)
T 1xhn_A 98 ------FCKKH-----GFDP---QS-PLCVHIMLSGTVTKVNETEMDIAKHSLFIRHPEMKTW----P------------ 146 (184)
T ss_dssp ------HHHHH-----TCCT---TS-TTSCEEEEEEEEEECCGGGHHHHHHHHHHHCGGGGGS----C------------
T ss_pred ------ccccc-----CCCC---cc-ccCceEEEEEEEEECChHHHHHHHHHHHHHCcChhHc----c------------
Confidence 00000 0001 11 1 35999999999999777788999999877322 22 1
Q ss_pred cCCCCCCCCCCCCCcccccCCCCCCCeEEEEEEeeeEEEEcCCccceeeCHhhhhhcCC
Q 010741 340 NGHRNESEPSRNGSEESKKDDKPMNGTSFYKLEMTKIQPILAHAHQAAVDIEDYRKAQP 398 (502)
Q Consensus 340 ~~~~~~~d~s~~g~~~~~~~~~~~~DFsFYRLe~erIrLIGGFGra~wVd~eDy~aAeP 398 (502)
..+||.||||++++++|+||||+++||+++||..|.|
T Consensus 147 ----------------------~~~~~~~~~l~i~~i~~v~gFG~~~~v~~~~~~~a~~ 183 (184)
T 1xhn_A 147 ----------------------SSHNWFFAKLNITNIWVLDYFGGPKIVTPEEYYNVTV 183 (184)
T ss_dssp ----------------------GGGCCEEEEEEEEEEEEECSSSSCEECCHHHHHHCC-
T ss_pred ----------------------cCCCEEEEEEEEeEEEEEccCCceEEeCHHHHhhccC
Confidence 1578999999999999999999999999999998876
No 6
>3gas_A Heme oxygenase; FMN-binding split barrel, oxidoreductase; HET: HEM; 1.80A {Helicobacter pylori}
Probab=98.67 E-value=7.9e-09 Score=101.20 Aligned_cols=71 Identities=6% Similarity=-0.100 Sum_probs=59.5
Q ss_pred CCeeEEEEEeeecccc-chhhHHHHhhccccC----CCCCCccccccCCccccccccCCCCCCCCCCCCCcccccCCCCC
Q 010741 289 PAGITIQGLLRPALIE-EHSDIQRHRSSNQYH----DVDNSKNVVVGNNQEDLHVINGHRNESEPSRNGSEESKKDDKPM 363 (502)
Q Consensus 289 ~~~lsI~G~lrpa~~e-E~s~ir~~~~~~~~~----~~y~s~~~~~~~~~e~~~~i~~~~~~~d~s~~g~~~~~~~~~~~ 363 (502)
..|||++|.++++.-+ +...++.+|+.++.. ..| . .+
T Consensus 164 ~~Rlt~~g~A~~v~~~~~~~~~~~~~~~r~p~~~~~~~~-----------------------~---------------~~ 205 (259)
T 3gas_A 164 RKRLRYKTNTRFIERGAEFDKAFDSFIEKTGGAGGIKTI-----------------------R---------------AM 205 (259)
T ss_dssp CCEEEEEEEEEEECSSHHHHHHHHHHHHHHCSTTTHHHH-----------------------H---------------TC
T ss_pred cCeEEEEEEEEECCCchHHHHHHHHHHHHcCCchhhHhc-----------------------c---------------cC
Confidence 3699999999999853 567899999998733 333 1 27
Q ss_pred CCeEEEEEEeeeEEEEcCCccceeeCHhhhhhcC
Q 010741 364 NGTSFYKLEMTKIQPILAHAHQAAVDIEDYRKAQ 397 (502)
Q Consensus 364 ~DFsFYRLe~erIrLIGGFGra~wVd~eDy~aAe 397 (502)
+||.||||+|+++|||||||+++||++++|....
T Consensus 206 ~DF~l~rl~p~~~r~v~GFG~a~~l~~~~l~~~~ 239 (259)
T 3gas_A 206 QDFHLIALDFKEGRFVKGFGQAYDILGDKIAYVG 239 (259)
T ss_dssp TTEEEEEEEEEEEEEEEETTEEEEEETTEEEESC
T ss_pred CCeEEEEEEEeEEEEEccccEEEEeCHHHHHHhh
Confidence 9999999999999999999999999999998644
No 7
>3swj_A CHUZ, putative uncharacterized protein; heme oxygenase, bacterial iron aquisition, heme bindin; HET: HEM; 2.41A {Campylobacter jejuni}
Probab=98.57 E-value=3e-08 Score=96.23 Aligned_cols=73 Identities=10% Similarity=-0.014 Sum_probs=58.8
Q ss_pred CeeEEEEEeeecccc-chhhHHHHhhccccCC-CCCCccccccCCccccccccCCCCCCCCCCCCCcccccCCCCCCCeE
Q 010741 290 AGITIQGLLRPALIE-EHSDIQRHRSSNQYHD-VDNSKNVVVGNNQEDLHVINGHRNESEPSRNGSEESKKDDKPMNGTS 367 (502)
Q Consensus 290 ~~lsI~G~lrpa~~e-E~s~ir~~~~~~~~~~-~y~s~~~~~~~~~e~~~~i~~~~~~~d~s~~g~~~~~~~~~~~~DFs 367 (502)
.||+|+|.++.+..+ |...++.+|+.++... .. .+- ..++||.
T Consensus 165 ~rltl~G~a~~v~~~~e~~~~~~~~~~k~p~a~~~--~~~---------------------------------~~~~Df~ 209 (251)
T 3swj_A 165 KRLRYRVNASFLERGERFDQIYDEFEKQTGGEGGI--KTI---------------------------------RKMLDFH 209 (251)
T ss_dssp CEEEEEEEEEECCSSHHHHHHHHHHHHHHCSTTTH--HHH---------------------------------HTCTTEE
T ss_pred ceEEEEEEEEEecChhHHHHHHHHHHHHCCCchhh--hhc---------------------------------CcccCEE
Confidence 499999999999864 6778899998887332 11 000 1268999
Q ss_pred EEEEEeeeEEEEcCCccceeeCHhhhhhcC
Q 010741 368 FYKLEMTKIQPILAHAHQAAVDIEDYRKAQ 397 (502)
Q Consensus 368 FYRLe~erIrLIGGFGra~wVd~eDy~aAe 397 (502)
||||+|+++|||||||+++||++++|..+.
T Consensus 210 l~rl~p~~~r~v~GFG~a~~l~~~~l~~~~ 239 (251)
T 3swj_A 210 LVKLEFKKGRFVKGFGQAYDIENGNVTHVG 239 (251)
T ss_dssp EEEEEEEEEEEEEETTEEEEESSSCCEESC
T ss_pred EEEEEeeEEEEECCcceeEEeCHHHHHHhh
Confidence 999999999999999999999999998755
No 8
>3tgv_A Heme-binding protein HUTZ; 2.00A {Vibrio cholerae}
Probab=98.10 E-value=9.9e-07 Score=78.40 Aligned_cols=59 Identities=8% Similarity=-0.013 Sum_probs=44.6
Q ss_pred CCeeEEEEEeeeccc--cchhhHHHHhhcccc--CCCCCCccccccCCccccccccCCCCCCCCCCCCCcccccCCCCCC
Q 010741 289 PAGITIQGLLRPALI--EEHSDIQRHRSSNQY--HDVDNSKNVVVGNNQEDLHVINGHRNESEPSRNGSEESKKDDKPMN 364 (502)
Q Consensus 289 ~~~lsI~G~lrpa~~--eE~s~ir~~~~~~~~--~~~y~s~~~~~~~~~e~~~~i~~~~~~~d~s~~g~~~~~~~~~~~~ 364 (502)
..||+|+|.++.+.. ++...++++|+.++. +..| . .++
T Consensus 79 ~~rltl~G~a~~v~~~~~~~~~~~~~~~~~~~~~a~~~-----------------------~---------------~~~ 120 (148)
T 3tgv_A 79 RKRLTFDAVASMVERDSELWCQVIAQMGERFGEIIDGL-----------------------S---------------QLQ 120 (148)
T ss_dssp CCEEEEEEEEEEECTTSHHHHHHHHHHHHHHCTHHHHH-----------------------T---------------TCT
T ss_pred ceEEEEeeeEEEcCCCcHHHHHHHHHHHhhcchhhhHh-----------------------h---------------ccC
Confidence 369999999999884 344566777776651 2223 1 279
Q ss_pred CeEEEEEEeeeEEEEcCCccc
Q 010741 365 GTSFYKLEMTKIQPILAHAHQ 385 (502)
Q Consensus 365 DFsFYRLe~erIrLIGGFGra 385 (502)
||.||||+|+++|||||||-.
T Consensus 121 DF~~~rl~p~~~r~V~GFG~~ 141 (148)
T 3tgv_A 121 DFMLFRLQPEQGLFVKGFGLE 141 (148)
T ss_dssp TEEEEEEEECSCCEEESCGGG
T ss_pred CEEEEEEEeEEEEEECccccc
Confidence 999999999999999999953
No 9
>1vl7_A Hypothetical protein ALR5027; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, oxidoreductase; 1.50A {Nostoc SP} SCOP: b.45.1.1
Probab=96.93 E-value=0.00047 Score=60.86 Aligned_cols=65 Identities=22% Similarity=0.281 Sum_probs=38.9
Q ss_pred chhhccceEEEEcCeeEEEEeeec-cCccccccccCCCCeeeccCCCEEEEecCchhHhhhhccCCCceEEEE
Q 010741 114 TAAETSRTIIEVNSTATLMFTDFT-NGGAHENIIWPDLPYVTDEHGNIYIQVKNEEDILQSLISENNFVQVII 185 (502)
Q Consensus 114 t~ae~aRTivE~N~ka~l~~~~~v-~~e~H~~i~w~e~~y~~D~~Gdiyfqv~~d~~il~~~~~~~n~v~v~i 185 (502)
..++.+|.+++-+..+ ++++.- ...||-...| |+.|+.|.+||-+.....=.+.+. .|.-|.+.|
T Consensus 18 ~~~~~~~~ll~~~~~~--~LaTv~~dG~P~~~~v~----~~~~~~g~~~f~t~~~s~k~~nl~-~np~vsl~v 83 (157)
T 1vl7_A 18 KAQAEYAGFIQEFQSA--IISTISEQGIPNGSYAP----FVIDDAKNIYIYVSGLAVHTKNIE-ANPLVNVLF 83 (157)
T ss_dssp -----CHHHHTTCSEE--EEEEECTTSCEEEEEEE----EEECTTCCEEEEECTTSHHHHHHH-HCCEEEEEE
T ss_pred hHHHHHHHHHHhCCEE--EEEEECCCCCEEEEEEE----EEEcCCCCEEEEEeCccHHHHHHH-hCCcEEEEE
Confidence 4455667776544444 444443 3457766665 778887999999887776666664 555555554
No 10
>2hq7_A Protein, related to general stress protein 26(GS2 B.subtilis; NP_350077.1, structural genomics, joint center for structural genomics; 2.00A {Clostridium acetobutylicum} SCOP: b.45.1.1
Probab=78.39 E-value=2 Score=36.19 Aligned_cols=22 Identities=0% Similarity=-0.334 Sum_probs=20.8
Q ss_pred CCeEEEEEEeeeEEEEcCCccc
Q 010741 364 NGTSFYKLEMTKIQPILAHAHQ 385 (502)
Q Consensus 364 ~DFsFYRLe~erIrLIGGFGra 385 (502)
+++.+|||.|.+++|..|||.+
T Consensus 115 ~~~~~~~i~p~~~~~w~~~~~~ 136 (146)
T 2hq7_A 115 PDYTALCFTAEWGNYYRHLKNI 136 (146)
T ss_dssp TTEEEEEEEEEEEEEEETTEEE
T ss_pred CCEEEEEEEccEEEEEeCCCCe
Confidence 6899999999999999999986
No 11
>2fhq_A Putative general stress protein; alpha-beta structure, structural genomics, PSI, protein STRU initiative; HET: MSE; 1.87A {Bacteroides thetaiotaomicron} SCOP: b.45.1.1
Probab=63.44 E-value=12 Score=31.24 Aligned_cols=22 Identities=9% Similarity=0.033 Sum_probs=18.7
Q ss_pred CCCeEEEEEEeeeEEEEcCCccc
Q 010741 363 MNGTSFYKLEMTKIQPILAHAHQ 385 (502)
Q Consensus 363 ~~DFsFYRLe~erIrLIGGFGra 385 (502)
.+++.+|||.|.+++|..| |+.
T Consensus 114 ~~~~~~~~i~p~~~~~~~~-~~~ 135 (141)
T 2fhq_A 114 DPGYVLLKFTANHATYWIE-GTF 135 (141)
T ss_dssp CTTEEEEEEEEEEEEEEET-TEE
T ss_pred CCCEEEEEEEcCEEEEeeC-Cce
Confidence 3689999999999999987 654
No 12
>3ec6_A General stress protein 26; alpha-beta structure, structural genomics of niaid; HET: FAD; 1.60A {Bacillus anthracis} SCOP: b.45.1.0
Probab=54.58 E-value=40 Score=28.31 Aligned_cols=21 Identities=14% Similarity=-0.015 Sum_probs=16.8
Q ss_pred CCCeEEEEEEeeeEEEEcCCc
Q 010741 363 MNGTSFYKLEMTKIQPILAHA 383 (502)
Q Consensus 363 ~~DFsFYRLe~erIrLIGGFG 383 (502)
.+++.++||++.+++|..+.|
T Consensus 110 ~~~~~~i~i~p~~~~~~d~~g 130 (139)
T 3ec6_A 110 DPNYVLIKINPDTIYYIDGAG 130 (139)
T ss_dssp CTTEEEEEEEEEEEEEEC---
T ss_pred CCCEEEEEEEeeEEEEEcCCC
Confidence 478999999999999999988
No 13
>2asf_A Hypothetical protein RV2074; H37RV, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: CIT; 1.60A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=53.50 E-value=29 Score=29.07 Aligned_cols=54 Identities=6% Similarity=0.018 Sum_probs=36.1
Q ss_pred CeeEEEEEeeeccc-cchhhHHHHhhccccCCCCCCccccccCCccccccccCCCCCCCCCCCCCcccccCCCCCCCeEE
Q 010741 290 AGITIQGLLRPALI-EEHSDIQRHRSSNQYHDVDNSKNVVVGNNQEDLHVINGHRNESEPSRNGSEESKKDDKPMNGTSF 368 (502)
Q Consensus 290 ~~lsI~G~lrpa~~-eE~s~ir~~~~~~~~~~~y~s~~~~~~~~~e~~~~i~~~~~~~d~s~~g~~~~~~~~~~~~DFsF 368 (502)
.+++|.|.++.+.. ++...+.+.|..+.. ..+ ..+++.+
T Consensus 80 ~~v~v~G~a~~~~d~~~~~~~~~~~~~~~~-~~~---------------------------------------~~~~~~v 119 (137)
T 2asf_A 80 RWLSLEGRAAVNSDIDAVRDAELRYAQRYR-TPR---------------------------------------PNPRRVV 119 (137)
T ss_dssp EEEEEEEEEEEECCHHHHHHHHHHHHHHSC-CCC---------------------------------------CCTTEEE
T ss_pred CEEEEEEEEEEecCHHHHHHHHHHHHHhcC-ccc---------------------------------------CCCCEEE
Confidence 67899999998763 334455566654431 001 1367999
Q ss_pred EEEEeeeEEEEcCCc
Q 010741 369 YKLEMTKIQPILAHA 383 (502)
Q Consensus 369 YRLe~erIrLIGGFG 383 (502)
|||.|+++.-.++-+
T Consensus 120 iri~~~~v~g~~~~~ 134 (137)
T 2asf_A 120 IEVQIERVLGSADLL 134 (137)
T ss_dssp EEEEEEEEEECTTTC
T ss_pred EEEEEEEEEEecccc
Confidence 999999999776544
No 14
>3db0_A LIN2891 protein; putative pyridoxamine 5'-phosphate oxidase, STR genomics, joint center for structural genomics, JCSG; 2.00A {Listeria innocua}
Probab=48.35 E-value=29 Score=28.46 Aligned_cols=50 Identities=16% Similarity=0.185 Sum_probs=27.3
Q ss_pred EEEEeeeccCccccccccCCCCeeeccCCCEEEEecCchhHhhhhccCCCceEEEE
Q 010741 130 TLMFTDFTNGGAHENIIWPDLPYVTDEHGNIYIQVKNEEDILQSLISENNFVQVII 185 (502)
Q Consensus 130 ~l~~~~~v~~e~H~~i~w~e~~y~~D~~Gdiyfqv~~d~~il~~~~~~~n~v~v~i 185 (502)
+.++.+.-...||-...| |+. +.|.|||-...+..-++.+. .|..|.+.|
T Consensus 19 ~~~LaT~~~g~P~~~pv~----~~~-~~~~l~f~t~~~s~k~~~l~-~np~v~l~v 68 (128)
T 3db0_A 19 VGVLTSVQGDFPHARYMT----FLH-DGLTLYTPSGKELPKTEEVR-RNPHVCVLI 68 (128)
T ss_dssp EEEEEEEETTEEEEEEEE----CEE-ETTEEEEEC----CTTCCCC-CCCEEEEEE
T ss_pred EEEEEEecCCCEEEEEEE----EEe-cCCEEEEEECCCCHHHHHHH-hCCceEEEE
Confidence 334444446678777776 233 45888888777666666653 444455444
No 15
>2iab_A Hypothetical protein; NP_828636.1, structural genomics, JOIN for structural genomics, JCSG; 2.00A {Streptomyces avermitilis}
Probab=39.04 E-value=71 Score=27.63 Aligned_cols=20 Identities=5% Similarity=0.233 Sum_probs=16.7
Q ss_pred CCeEEEEEEeeeEEEEcCCc
Q 010741 364 NGTSFYKLEMTKIQPILAHA 383 (502)
Q Consensus 364 ~DFsFYRLe~erIrLIGGFG 383 (502)
+++.+|||.|++|.+-++.+
T Consensus 119 ~~~~~~ri~p~~v~~w~~~~ 138 (155)
T 2iab_A 119 TSYLYFRISPRRVQAWREAN 138 (155)
T ss_dssp SCEEEEEEEEEEEEEESSGG
T ss_pred CCEEEEEEEEEEEEEecCCC
Confidence 67999999999999777543
No 16
>2hti_A BH0577 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, FMN-binding protein; HET: FAD; 2.50A {Bacillus halodurans} SCOP: b.45.1.1
Probab=35.54 E-value=15 Score=32.85 Aligned_cols=68 Identities=13% Similarity=0.100 Sum_probs=48.9
Q ss_pred cCCcCchhhccceEEEEcCeeEEEEeeeccCccccccccCCCCeeeccCCCEEEEecCchhHhhhhccCCCceEEE
Q 010741 109 EEARLTAAETSRTIIEVNSTATLMFTDFTNGGAHENIIWPDLPYVTDEHGNIYIQVKNEEDILQSLISENNFVQVI 184 (502)
Q Consensus 109 ~~~~lt~ae~aRTivE~N~ka~l~~~~~v~~e~H~~i~w~e~~y~~D~~Gdiyfqv~~d~~il~~~~~~~n~v~v~ 184 (502)
++-.||+.|.++.+++-+.-|+|.+.+ .+.||=.-. .|+.|+ |.|||-......-++.+. .|..|.+.
T Consensus 8 ~~~~~~d~e~i~~~L~~~~~~~Lat~~--~g~P~~~Pv----~f~~~~-~~ly~hta~~~~k~~~l~-~np~V~~~ 75 (185)
T 2hti_A 8 TKRECKDEKKITEFLNKARTGFLGLST--NDQPYVIPL----NFVWHN-HAIYFHGASEGRKIKMIE-ANPEVCFT 75 (185)
T ss_dssp ---CCCCHHHHHHHHHHCCCEEEEEEE--TTEEEEEEE----CCEEET-TEEEEEEESSSHHHHHHH-HCCEEEEE
T ss_pred ccccCCCHHHHHHHHhcCCEEEEEEee--CCEEEEEEE----EEEEEC-CEEEEEeCCcCHHHHHhh-cCCeEEEE
Confidence 455689999889999999999988766 456766544 467775 899999988888888764 44444444
No 17
>1vl7_A Hypothetical protein ALR5027; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, oxidoreductase; 1.50A {Nostoc SP} SCOP: b.45.1.1
Probab=31.04 E-value=26 Score=30.26 Aligned_cols=59 Identities=3% Similarity=-0.023 Sum_probs=43.3
Q ss_pred CeeEEEEEeeecccc--chhhHHHHhhccccCCCCCCccccccCCccccccccCCCCCCCCCCCCCcccccCCCCCCCeE
Q 010741 290 AGITIQGLLRPALIE--EHSDIQRHRSSNQYHDVDNSKNVVVGNNQEDLHVINGHRNESEPSRNGSEESKKDDKPMNGTS 367 (502)
Q Consensus 290 ~~lsI~G~lrpa~~e--E~s~ir~~~~~~~~~~~y~s~~~~~~~~~e~~~~i~~~~~~~d~s~~g~~~~~~~~~~~~DFs 367 (502)
.+|+|.|.++.+..+ +...++.+|...+..... .|. ..+||.
T Consensus 97 ~~v~i~G~a~~v~~~~~~~~~~~~~~~~~~p~~~~--~~~----------------------------------~~~~~~ 140 (157)
T 1vl7_A 97 RRLSFDCTATLIERESQKWNQVVDQFQERFGQIIE--VLR----------------------------------GLADFR 140 (157)
T ss_dssp CEEEEEEEEEEECTTSHHHHHHHHHHHHHHTHHHH--HHH----------------------------------HHSCCE
T ss_pred ceEEEEEEEEEcCCCcHHHHHHHHHHHHHCchHHH--Hhh----------------------------------ccCCEE
Confidence 689999999999854 335677777776522101 111 137899
Q ss_pred EEEEEeeeEEEEcCCcc
Q 010741 368 FYKLEMTKIQPILAHAH 384 (502)
Q Consensus 368 FYRLe~erIrLIGGFGr 384 (502)
+|||+|++++|++|||+
T Consensus 141 l~~l~~~~~~~~~GFG~ 157 (157)
T 1vl7_A 141 IFQLTPKEGRFVIGFGA 157 (157)
T ss_dssp EEEEEEEEEEEECSSCC
T ss_pred EEEEEEeEEEEEcCcCC
Confidence 99999999999999996
No 18
>3f7e_A Pyridoxamine 5'-phosphate oxidase-related, FMN- binding; F420 dependent reductase, unknown function; HET: MSE; 1.23A {Mycobacterium smegmatis}
Probab=28.64 E-value=1.4e+02 Score=24.59 Aligned_cols=29 Identities=10% Similarity=0.196 Sum_probs=19.5
Q ss_pred CCCeeEEEEEeeeccccchhhHHHHhhcc
Q 010741 288 PPAGITIQGLLRPALIEEHSDIQRHRSSN 316 (502)
Q Consensus 288 P~~~lsI~G~lrpa~~eE~s~ir~~~~~~ 316 (502)
|-.+|+|.|.++.+..++...+...+..+
T Consensus 73 ~~~~v~v~G~a~~v~~~~~~~~~~~l~~k 101 (131)
T 3f7e_A 73 PYRYLEVRGLVEDIVPDPTGAFYLKLNDR 101 (131)
T ss_dssp TTCEEEEEEEEEEEEECTTCHHHHHHHHH
T ss_pred CeeEEEEEEEEEEeccCccHHHHHHHHHH
Confidence 45799999999988755444444444444
No 19
>2i02_A General stress protein of COG3871; pyridoxamine 5'-phosphate like family protein, structural genomics, joint center for structural genomics; HET: MSE FMN P33; 1.80A {Nostoc punctiforme} SCOP: b.45.1.1
Probab=26.66 E-value=85 Score=26.28 Aligned_cols=53 Identities=13% Similarity=0.135 Sum_probs=31.5
Q ss_pred eEEEEeeec-cCccccccccCCCCeeeccCCCEEEEecCchhHhhhhccCCCceEEE
Q 010741 129 ATLMFTDFT-NGGAHENIIWPDLPYVTDEHGNIYIQVKNEEDILQSLISENNFVQVI 184 (502)
Q Consensus 129 a~l~~~~~v-~~e~H~~i~w~e~~y~~D~~Gdiyfqv~~d~~il~~~~~~~n~v~v~ 184 (502)
-+.++.+.- ...||=...|.- +.+|+.|.|||-...+..-.+.+. +|..|.+.
T Consensus 23 ~~~~LaT~~~dG~P~~~pv~~~--~~~~~~~~l~f~t~~~s~k~~~l~-~np~v~l~ 76 (148)
T 2i02_A 23 DYGMFTTVDDDGSLHSYPMSKS--GDINSEATLWFFTYAGSHKVTEIE-HHEQVNVS 76 (148)
T ss_dssp CEEEEEEECTTSCEEEEEEECB--CC---CCEEEEEEETTSHHHHHHH-HCCEEEEE
T ss_pred CEEEEEEEcCCCCEEEEEeEee--EEEcCCCeEEEEEcCCCHHHHHHH-hCCcEEEE
Confidence 344555544 455888777741 234567889999888877777764 44444443
No 20
>1rfe_A Hypothetical protein RV2991; structural genomics, TB, FMN BIN PSI, protein structure initiative, TB structural genomics consortium; 2.00A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=22.85 E-value=44 Score=28.38 Aligned_cols=69 Identities=20% Similarity=0.377 Sum_probs=42.9
Q ss_pred cCCcCchhhccceEEEEcCeeEEEEeeeccCccccccccCCCCeeeccCCCEEEEecCchhHhhhhccCCCceEEEE
Q 010741 109 EEARLTAAETSRTIIEVNSTATLMFTDFTNGGAHENIIWPDLPYVTDEHGNIYIQVKNEEDILQSLISENNFVQVII 185 (502)
Q Consensus 109 ~~~~lt~ae~aRTivE~N~ka~l~~~~~v~~e~H~~i~w~e~~y~~D~~Gdiyfqv~~d~~il~~~~~~~n~v~v~i 185 (502)
.+..||++| ++.+++-+.-++|...+- ...||-...| |+.| .|.|||-......-.+.+. +|..|.+.|
T Consensus 6 ~~~~~~~~~-~~~~l~~~~~~~LaT~~~-~G~P~~~pv~----~~~~-~~~l~~~t~~~~~k~~~l~-~np~v~l~~ 74 (162)
T 1rfe_A 6 ADIVMSEAE-IADFVNSSRTGTLATIGP-DGQPHLTAMW----YAVI-DGEIWLETKAKSQKAVNLR-RDPRVSFLL 74 (162)
T ss_dssp TTTCCCHHH-HHHHHHHCCCEEEEEECT-TSCEEEEEEC----CEEE-TTEEEEEEETTSHHHHHHH-HCCEEEEEE
T ss_pred cccCCCHHH-HHHHHhcCcEEEEEEECC-CCCEEEEEEE----EEEE-CCEEEEEecCccHHHHHHh-hCCeEEEEE
Confidence 445577644 455565555555544331 4458877776 4555 4899999988777777774 555555554
No 21
>1wmh_B Partitioning defective-6 homolog alpha; kinase, PB1 domain, OPCA motif, APKC, cell polarity, transferase/cell cycle complex; 1.50A {Homo sapiens} SCOP: d.15.2.2
Probab=22.82 E-value=83 Score=26.38 Aligned_cols=32 Identities=22% Similarity=0.536 Sum_probs=26.2
Q ss_pred eeccCCCEEEEecCchhHhhhhccCCCceEEEE
Q 010741 153 VTDEHGNIYIQVKNEEDILQSLISENNFVQVII 185 (502)
Q Consensus 153 ~~D~~Gdiyfqv~~d~~il~~~~~~~n~v~v~i 185 (502)
-+|++||+ ..++||+|+-.-+..++-...++|
T Consensus 52 Y~D~dGDL-lpInnDdnl~~Al~~a~plLRl~I 83 (86)
T 1wmh_B 52 YTDAHGDL-LPLTNDDSLHRALASGPPPLRLLV 83 (86)
T ss_dssp EECTTSCE-EECCSHHHHHHHTTSSSSCEEEEE
T ss_pred EECCCCCE-eeecCHHHHHHHHHhCCCcEEEEE
Confidence 46999996 799999999999987755666665
No 22
>3ju0_A Phage integrase; four stranded beta-sheet, DNA binding protein; 1.60A {Pectobacterium atrosepticum}
Probab=20.77 E-value=91 Score=26.51 Aligned_cols=46 Identities=28% Similarity=0.355 Sum_probs=26.9
Q ss_pred cCCCceEEEec-CCcceEEEEec----------CCCCCCHHHHH---HHHHHHcCcccCC
Q 010741 444 DSIGFDLRVCA-GTQIQTLRFAF----------NTRATSEYSAE---RQLNDLLFPRIHQ 489 (502)
Q Consensus 444 DrlGfDLRV~s-G~~~r~lR~pF----------p~patd~~dAR---kaLveLL~pr~~~ 489 (502)
|..||-|+|.. |...-.+|..| .-|..+..+|| ..++.++..-+-+
T Consensus 22 Dg~GL~L~V~psG~K~w~~rYr~~GK~~~~~LG~yp~~SLa~AR~~a~~~r~~l~~GiDP 81 (108)
T 3ju0_A 22 DGFGMHLLVHPNGSKYWRLSYRFEKKQRLLALGVYPAVSLADARQRRDEAKKLLAAGIDP 81 (108)
T ss_dssp EETTEEEEECTTSCEEEEEEEEETTEEEEEEEEEETTSCHHHHHHHHHHHHHHHHTTCCG
T ss_pred cCCceEEEEEcCCCEEEEEEEEEcCceEEEecCCCCCCCHHHHHHHHHHHHHHHHcCCCH
Confidence 56899999973 32222333333 22678888888 4556666554333
Done!