Query 010744
Match_columns 502
No_of_seqs 450 out of 1389
Neff 10.9
Searched_HMMs 46136
Date Fri Mar 29 04:04:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010744.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010744hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2271 UhpC Sugar phosphate p 100.0 6.4E-44 1.4E-48 323.2 25.5 384 34-435 22-412 (448)
2 COG2814 AraJ Arabinose efflux 100.0 5E-41 1.1E-45 309.6 32.8 354 37-435 9-364 (394)
3 PRK09556 uhpT sugar phosphate 100.0 7.5E-41 1.6E-45 332.0 30.5 379 36-430 24-411 (467)
4 KOG1330 Sugar transporter/spin 100.0 2.6E-40 5.6E-45 302.6 22.2 387 34-437 26-418 (493)
5 TIGR02332 HpaX 4-hydroxyphenyl 100.0 8.7E-40 1.9E-44 318.5 26.0 386 37-435 4-399 (412)
6 PRK03545 putative arabinose tr 100.0 1.6E-38 3.5E-43 308.6 33.0 350 37-432 5-356 (390)
7 PRK11663 regulatory protein Uh 100.0 2.1E-38 4.6E-43 311.4 33.3 379 37-432 19-400 (434)
8 PRK11551 putative 3-hydroxyphe 100.0 6.6E-38 1.4E-42 306.5 30.4 363 36-434 10-373 (406)
9 PRK14995 methyl viologen resis 100.0 3.3E-37 7.2E-42 307.5 32.9 374 38-432 3-414 (495)
10 PRK12307 putative sialic acid 100.0 2.7E-37 5.8E-42 304.2 30.5 366 37-432 14-384 (426)
11 PRK10406 alpha-ketoglutarate t 100.0 9.6E-37 2.1E-41 299.7 34.0 364 37-435 18-402 (432)
12 PRK11273 glpT sn-glycerol-3-ph 100.0 1.2E-36 2.6E-41 300.6 34.0 380 37-433 25-412 (452)
13 TIGR01299 synapt_SV2 synaptic 100.0 2E-37 4.2E-42 314.0 29.0 383 36-431 162-710 (742)
14 PRK10642 proline/glycine betai 100.0 1.6E-36 3.4E-41 302.5 35.1 372 40-434 15-407 (490)
15 TIGR00892 2A0113 monocarboxyla 100.0 3.1E-37 6.6E-42 304.2 29.0 382 37-435 15-399 (455)
16 TIGR00891 2A0112 putative sial 100.0 5.8E-37 1.3E-41 300.2 30.6 382 36-435 7-394 (405)
17 PRK09705 cynX putative cyanate 100.0 7.5E-37 1.6E-41 296.4 30.4 351 38-435 7-359 (393)
18 PLN00028 nitrate transmembrane 100.0 4.9E-36 1.1E-40 297.1 34.9 365 38-425 33-403 (476)
19 TIGR00893 2A0114 d-galactonate 100.0 3.4E-37 7.3E-42 300.9 26.1 373 50-435 3-377 (399)
20 TIGR00903 2A0129 major facilit 100.0 9.4E-37 2E-41 290.9 27.2 338 53-430 3-341 (368)
21 TIGR00894 2A0114euk Na(+)-depe 100.0 3.1E-37 6.8E-42 306.6 23.9 382 36-431 14-422 (465)
22 TIGR00890 2A0111 Oxalate/Forma 100.0 2.8E-36 6E-41 292.4 28.8 344 52-432 14-358 (377)
23 PRK15034 nitrate/nitrite trans 100.0 2.4E-35 5.3E-40 282.3 32.9 361 37-435 30-432 (462)
24 PRK10091 MFS transport protein 100.0 1.1E-35 2.4E-40 287.7 31.0 349 42-435 4-354 (382)
25 PRK10213 nepI ribonucleoside t 100.0 4E-35 8.7E-40 284.0 33.9 350 37-432 16-367 (394)
26 PRK15402 multidrug efflux syst 100.0 4.5E-35 9.7E-40 286.2 33.5 362 37-433 9-372 (406)
27 PRK15075 citrate-proton sympor 100.0 4.6E-35 1E-39 288.0 33.3 363 39-433 13-396 (434)
28 COG2223 NarK Nitrate/nitrite t 100.0 1.6E-35 3.4E-40 269.5 27.3 360 36-435 9-379 (417)
29 PRK03699 putative transporter; 100.0 2.6E-35 5.7E-40 286.2 30.8 352 38-433 4-357 (394)
30 PRK10077 xylE D-xylose transpo 100.0 2.8E-35 6.1E-40 294.4 31.6 383 36-429 7-424 (479)
31 PRK09952 shikimate transporter 100.0 7E-35 1.5E-39 286.4 33.3 368 37-433 18-408 (438)
32 TIGR00879 SP MFS transporter, 100.0 1E-35 2.2E-40 298.1 26.8 380 39-432 26-446 (481)
33 PRK03893 putative sialic acid 100.0 4.4E-35 9.6E-40 294.2 31.4 376 37-432 16-429 (496)
34 TIGR00881 2A0104 phosphoglycer 100.0 2.2E-35 4.9E-40 286.2 27.4 369 48-432 2-373 (379)
35 TIGR00887 2A0109 phosphate:H+ 100.0 5.4E-35 1.2E-39 292.6 30.4 389 35-432 10-455 (502)
36 PRK10504 putative transporter; 100.0 3.6E-34 7.8E-39 285.5 34.3 374 42-433 11-417 (471)
37 PRK10489 enterobactin exporter 100.0 5.5E-35 1.2E-39 286.5 26.7 347 48-433 24-376 (417)
38 TIGR00710 efflux_Bcr_CflA drug 100.0 5.1E-34 1.1E-38 277.3 32.9 350 44-429 8-359 (385)
39 TIGR00712 glpT glycerol-3-phos 100.0 4.1E-34 8.9E-39 281.6 32.1 379 38-432 24-409 (438)
40 PRK15403 multidrug efflux syst 100.0 1.8E-33 3.9E-38 274.1 35.9 354 43-431 18-373 (413)
41 TIGR00900 2A0121 H+ Antiporter 100.0 1.6E-34 3.6E-39 278.7 27.9 353 46-432 4-364 (365)
42 TIGR00711 efflux_EmrB drug res 100.0 1.5E-34 3.3E-39 289.7 28.0 372 41-432 2-411 (485)
43 PRK05122 major facilitator sup 100.0 9.4E-34 2E-38 276.4 30.3 341 41-432 15-365 (399)
44 TIGR00897 2A0118 polyol permea 100.0 2.6E-33 5.5E-38 272.9 32.8 357 43-433 15-378 (402)
45 PF07690 MFS_1: Major Facilita 100.0 6.9E-35 1.5E-39 279.9 20.9 347 47-422 2-352 (352)
46 TIGR00895 2A0115 benzoate tran 100.0 1.9E-34 4.1E-39 281.7 24.1 374 37-428 13-397 (398)
47 PRK11043 putative transporter; 100.0 5.2E-33 1.1E-37 271.3 33.1 342 50-431 15-357 (401)
48 PRK12382 putative transporter; 100.0 1E-32 2.2E-37 268.4 33.1 340 42-432 16-365 (392)
49 PRK03633 putative MFS family t 100.0 5.2E-33 1.1E-37 269.0 29.4 342 42-433 7-349 (381)
50 PRK11646 multidrug resistance 100.0 1.5E-32 3.1E-37 266.7 31.6 344 48-435 17-363 (400)
51 PRK11652 emrD multidrug resist 100.0 1.7E-32 3.7E-37 267.0 30.9 353 39-431 6-360 (394)
52 PRK10133 L-fucose transporter; 100.0 2.7E-32 5.8E-37 267.1 31.2 360 37-432 22-408 (438)
53 PRK11195 lysophospholipid tran 100.0 3.6E-32 7.9E-37 263.3 31.2 345 45-429 7-354 (393)
54 PRK09874 drug efflux system pr 100.0 6.3E-32 1.4E-36 264.6 33.0 348 43-432 16-374 (408)
55 KOG2532 Permease of the major 100.0 4.8E-33 1E-37 268.5 22.7 347 68-430 65-418 (466)
56 TIGR00899 2A0120 sugar efflux 100.0 3.8E-32 8.1E-37 263.2 28.9 341 48-432 4-350 (375)
57 TIGR00898 2A0119 cation transp 100.0 2.4E-33 5.2E-38 282.0 21.2 346 62-430 110-470 (505)
58 PRK10473 multidrug efflux syst 100.0 7.3E-32 1.6E-36 262.4 30.6 343 45-433 7-351 (392)
59 PRK11102 bicyclomycin/multidru 100.0 1.4E-31 3E-36 259.3 30.1 334 56-424 6-342 (377)
60 PRK10054 putative transporter; 100.0 2.7E-31 5.8E-36 257.5 30.2 345 46-433 12-361 (395)
61 TIGR00886 2A0108 nitrite extru 100.0 1E-31 2.2E-36 259.2 27.1 353 44-418 4-366 (366)
62 KOG0569 Permease of the major 100.0 6.3E-31 1.4E-35 250.4 31.5 387 41-434 11-433 (485)
63 KOG2504 Monocarboxylate transp 100.0 9.9E-32 2.1E-36 262.7 24.8 385 35-436 40-455 (509)
64 KOG2533 Permease of the major 100.0 4.2E-32 9.1E-37 262.3 21.0 291 39-331 43-337 (495)
65 TIGR00885 fucP L-fucose:H+ sym 100.0 7.4E-31 1.6E-35 254.6 29.4 351 43-432 5-382 (410)
66 cd06174 MFS The Major Facilita 100.0 9.9E-31 2.1E-35 250.9 29.4 323 45-432 3-328 (352)
67 TIGR00896 CynX cyanate transpo 100.0 2E-31 4.3E-36 255.7 24.0 334 58-435 17-352 (355)
68 TIGR00883 2A0106 metabolite-pr 100.0 3.3E-31 7.1E-36 258.4 25.7 354 51-435 3-379 (394)
69 PRK11010 ampG muropeptide tran 100.0 3.5E-30 7.6E-35 255.7 33.3 352 44-432 15-379 (491)
70 TIGR00902 2A0127 phenyl propri 100.0 1.3E-30 2.8E-35 252.2 29.1 342 46-432 9-356 (382)
71 TIGR00805 oat sodium-independe 100.0 3.1E-30 6.6E-35 261.5 31.6 428 42-473 34-625 (633)
72 PRK15011 sugar efflux transpor 100.0 1E-29 2.2E-34 246.8 31.1 338 49-432 23-367 (393)
73 TIGR00889 2A0110 nucleoside tr 100.0 2.8E-29 6E-34 244.7 29.3 346 47-434 8-374 (418)
74 COG2807 CynX Cyanate permease 100.0 2.8E-29 6.1E-34 223.5 26.2 351 40-435 11-363 (395)
75 PRK11128 putative 3-phenylprop 100.0 8.3E-29 1.8E-33 239.6 29.1 339 50-433 13-357 (382)
76 PF05977 MFS_3: Transmembrane 100.0 1.5E-28 3.2E-33 241.7 30.0 353 43-433 12-371 (524)
77 PRK06814 acylglycerophosphoeth 100.0 1.3E-28 2.8E-33 270.6 32.7 359 44-433 18-398 (1140)
78 COG0738 FucP Fucose permease [ 100.0 2.8E-28 6E-33 220.7 27.3 357 39-433 11-386 (422)
79 PRK09528 lacY galactoside perm 100.0 1.3E-28 2.8E-33 241.5 26.7 348 48-432 17-379 (420)
80 TIGR00901 2A0125 AmpG-related 100.0 1.8E-28 3.8E-33 235.5 26.5 323 58-415 5-355 (356)
81 PRK11902 ampG muropeptide tran 100.0 2.4E-27 5.2E-32 231.1 33.6 347 47-433 5-367 (402)
82 KOG0254 Predicted transporter 100.0 8.7E-28 1.9E-32 240.5 30.7 382 39-431 43-457 (513)
83 KOG0253 Synaptic vesicle trans 100.0 7.2E-28 1.6E-32 213.3 25.2 372 34-425 71-490 (528)
84 PRK08633 2-acyl-glycerophospho 100.0 2.3E-27 5E-32 261.9 35.3 347 56-430 25-383 (1146)
85 KOG3764 Vesicular amine transp 100.0 2E-29 4.3E-34 226.2 13.2 319 73-432 103-430 (464)
86 TIGR00792 gph sugar (Glycoside 100.0 1.6E-27 3.5E-32 235.6 28.0 364 62-463 21-407 (437)
87 TIGR00882 2A0105 oligosacchari 100.0 4.7E-27 1E-31 228.8 28.9 351 45-432 6-371 (396)
88 PRK10207 dipeptide/tripeptide 100.0 1.7E-26 3.6E-31 228.1 33.1 379 41-428 14-438 (489)
89 KOG0252 Inorganic phosphate tr 100.0 4.7E-28 1E-32 221.3 20.1 388 36-432 36-469 (538)
90 TIGR00924 yjdL_sub1_fam amino 100.0 2.9E-26 6.2E-31 226.6 32.8 383 43-431 12-443 (475)
91 PF06609 TRI12: Fungal trichot 100.0 2.6E-26 5.7E-31 224.5 30.4 370 46-432 49-468 (599)
92 KOG2615 Permease of the major 100.0 8.3E-28 1.8E-32 214.5 17.4 346 74-434 66-417 (451)
93 TIGR02718 sider_RhtX_FptX side 100.0 1.1E-25 2.3E-30 218.8 33.1 352 43-432 3-367 (390)
94 TIGR00806 rfc RFC reduced fola 100.0 1.1E-26 2.4E-31 217.9 23.5 348 57-422 42-406 (511)
95 PF00083 Sugar_tr: Sugar (and 100.0 5.4E-32 1.2E-36 268.5 -13.5 375 47-433 6-413 (451)
96 PTZ00207 hypothetical protein; 99.9 8E-25 1.7E-29 215.8 29.7 381 36-433 23-516 (591)
97 KOG0255 Synaptic vesicle trans 99.9 1.1E-25 2.3E-30 227.0 22.2 342 68-430 110-467 (521)
98 PRK09584 tppB putative tripept 99.9 6.7E-23 1.5E-27 203.8 31.9 374 44-431 24-440 (500)
99 PRK09669 putative symporter Ya 99.9 3.6E-23 7.7E-28 204.3 29.7 341 61-436 30-392 (444)
100 PF03825 Nuc_H_symport: Nucleo 99.9 4.2E-23 9.2E-28 197.5 28.4 348 49-433 10-366 (400)
101 PRK10429 melibiose:sodium symp 99.9 1.2E-22 2.5E-27 201.8 31.4 346 63-436 29-397 (473)
102 KOG4686 Predicted sugar transp 99.9 3.6E-25 7.9E-30 189.3 10.0 366 37-436 40-419 (459)
103 TIGR00788 fbt folate/biopterin 99.9 2.1E-23 4.6E-28 205.6 23.2 373 41-433 26-415 (468)
104 TIGR01301 GPH_sucrose GPH fami 99.9 2.2E-21 4.8E-26 187.8 32.0 373 47-434 10-447 (477)
105 KOG2563 Permease of the major 99.9 3.6E-22 7.8E-27 183.3 24.6 373 34-433 38-423 (480)
106 PF13347 MFS_2: MFS/sugar tran 99.9 5E-22 1.1E-26 195.2 25.9 365 62-463 23-412 (428)
107 PF11700 ATG22: Vacuole efflux 99.9 1.7E-20 3.7E-25 182.9 34.5 338 78-435 72-446 (477)
108 PRK09848 glucuronide transport 99.9 3.1E-21 6.8E-26 190.8 29.0 336 62-436 30-392 (448)
109 PRK15462 dipeptide/tripeptide 99.9 6.8E-20 1.5E-24 178.2 35.8 378 43-432 11-437 (493)
110 PRK11462 putative transporter; 99.9 1.9E-20 4.1E-25 184.6 31.3 338 62-436 31-391 (460)
111 PF01306 LacY_symp: LacY proto 99.9 1.4E-20 2.9E-25 176.5 26.6 347 49-432 15-376 (412)
112 COG2211 MelB Na+/melibiose sym 99.9 2.4E-19 5.3E-24 169.6 32.7 378 62-473 34-434 (467)
113 KOG3626 Organic anion transpor 99.9 1.6E-19 3.5E-24 178.0 29.0 420 41-462 97-681 (735)
114 TIGR01272 gluP glucose/galacto 99.9 5.8E-20 1.3E-24 171.2 21.9 272 124-432 5-291 (310)
115 PF03137 OATP: Organic Anion T 99.8 6.8E-22 1.5E-26 195.4 -0.3 387 44-433 6-516 (539)
116 COG2270 Permeases of the major 99.8 5.7E-18 1.2E-22 155.2 24.1 331 76-435 58-407 (438)
117 KOG2325 Predicted transporter/ 99.8 1.6E-17 3.5E-22 157.6 20.9 191 36-227 29-235 (488)
118 PF03209 PUCC: PUCC protein; 99.8 8.2E-16 1.8E-20 141.7 27.6 333 67-434 6-366 (403)
119 COG3104 PTR2 Dipeptide/tripept 99.7 4.7E-15 1E-19 139.4 26.2 377 41-426 21-451 (498)
120 TIGR00880 2_A_01_02 Multidrug 99.7 7.1E-16 1.5E-20 126.6 10.7 137 82-223 4-140 (141)
121 KOG2816 Predicted transporter 99.7 1.9E-14 4E-19 139.1 21.6 365 40-435 21-396 (463)
122 PF03092 BT1: BT1 family; Int 99.6 1.6E-14 3.5E-19 140.7 18.5 350 61-433 10-382 (433)
123 PRK09528 lacY galactoside perm 99.6 6.7E-15 1.5E-19 144.5 15.4 151 70-225 256-407 (420)
124 TIGR00889 2A0110 nucleoside tr 99.6 1.9E-14 4E-19 140.6 17.8 166 62-227 229-408 (418)
125 PRK10642 proline/glycine betai 99.6 3.2E-14 6.9E-19 142.3 18.0 168 58-229 267-438 (490)
126 PRK05122 major facilitator sup 99.6 1.2E-13 2.7E-18 134.8 19.5 157 62-225 237-393 (399)
127 PRK15011 sugar efflux transpor 99.6 1.4E-13 3E-18 133.9 19.3 153 62-220 237-390 (393)
128 PF05631 DUF791: Protein of un 99.6 5.6E-13 1.2E-17 121.2 20.9 263 38-330 35-305 (354)
129 PRK11551 putative 3-hydroxyphe 99.6 9E-14 1.9E-18 136.1 16.8 160 60-223 239-398 (406)
130 TIGR01299 synapt_SV2 synaptic 99.6 1E-13 2.2E-18 141.9 17.5 138 81-225 600-737 (742)
131 TIGR00890 2A0111 Oxalate/Forma 99.5 4.9E-14 1.1E-18 136.5 13.4 148 61-213 225-374 (377)
132 PRK10489 enterobactin exporter 99.5 2.1E-13 4.5E-18 133.9 17.8 162 60-226 242-404 (417)
133 PRK09874 drug efflux system pr 99.5 1.5E-13 3.2E-18 134.7 16.7 160 59-223 237-400 (408)
134 cd06174 MFS The Major Facilita 99.5 1.9E-13 4.1E-18 130.9 14.9 162 53-219 187-350 (352)
135 TIGR00902 2A0127 phenyl propri 99.5 5.9E-13 1.3E-17 129.0 18.1 154 56-216 220-374 (382)
136 PRK12382 putative transporter; 99.5 6.6E-13 1.4E-17 129.3 18.1 154 61-221 236-389 (392)
137 TIGR00899 2A0120 sugar efflux 99.5 9.9E-13 2.1E-17 127.3 18.4 148 66-219 225-372 (375)
138 PRK03893 putative sialic acid 99.5 3.7E-13 8.1E-18 135.4 14.5 151 60-215 294-447 (496)
139 PRK03633 putative MFS family t 99.5 1.2E-12 2.7E-17 126.8 17.6 151 62-220 221-371 (381)
140 PRK03545 putative arabinose tr 99.5 3E-12 6.5E-17 124.5 18.9 155 62-223 227-382 (390)
141 TIGR00879 SP MFS transporter, 99.5 1.3E-12 2.8E-17 130.9 16.2 180 41-225 284-474 (481)
142 PF01770 Folate_carrier: Reduc 99.5 1.9E-11 4E-16 114.6 22.3 344 61-419 24-390 (412)
143 PRK03699 putative transporter; 99.5 2.3E-12 5E-17 125.4 16.6 167 49-221 213-380 (394)
144 TIGR00892 2A0113 monocarboxyla 99.4 2.4E-13 5.2E-18 134.5 9.3 162 49-215 249-415 (455)
145 PRK09556 uhpT sugar phosphate 99.4 1.8E-12 3.9E-17 129.0 15.2 177 43-219 260-447 (467)
146 PF06963 FPN1: Ferroportin1 (F 99.4 2.7E-10 5.8E-15 109.0 28.7 371 43-423 4-410 (432)
147 TIGR00897 2A0118 polyol permea 99.4 7.3E-12 1.6E-16 122.2 18.1 164 50-220 231-400 (402)
148 TIGR00883 2A0106 metabolite-pr 99.4 2.5E-12 5.4E-17 125.3 14.7 157 50-211 228-391 (394)
149 PRK09705 cynX putative cyanate 99.4 8E-12 1.7E-16 121.4 18.1 163 58-226 222-386 (393)
150 PF05977 MFS_3: Transmembrane 99.4 2.7E-11 5.9E-16 120.0 19.7 156 59-219 236-392 (524)
151 PRK11128 putative 3-phenylprop 99.4 1.9E-11 4.1E-16 118.5 17.7 148 62-216 226-374 (382)
152 TIGR00893 2A0114 d-galactonate 99.4 8.4E-12 1.8E-16 121.6 15.4 168 46-219 220-397 (399)
153 PRK11663 regulatory protein Uh 99.4 7.6E-12 1.7E-16 123.3 14.7 131 289-432 44-174 (434)
154 TIGR00882 2A0105 oligosacchari 99.4 2.2E-11 4.7E-16 118.7 16.8 144 72-220 250-394 (396)
155 PRK10077 xylE D-xylose transpo 99.4 2.8E-11 6.2E-16 121.2 17.6 167 59-225 289-461 (479)
156 COG2814 AraJ Arabinose efflux 99.4 4.5E-11 9.7E-16 111.5 17.4 166 51-223 222-388 (394)
157 TIGR00712 glpT glycerol-3-phos 99.4 2.2E-11 4.8E-16 120.2 16.5 136 290-435 49-184 (438)
158 KOG3098 Uncharacterized conser 99.3 4E-10 8.7E-15 107.5 23.9 328 77-427 50-410 (461)
159 TIGR00891 2A0112 putative sial 99.3 1.6E-11 3.4E-16 120.3 14.2 136 65-205 263-400 (405)
160 PRK10054 putative transporter; 99.3 4.3E-11 9.2E-16 116.3 16.4 154 69-228 237-391 (395)
161 PRK09952 shikimate transporter 99.3 9.8E-11 2.1E-15 115.5 18.7 153 65-220 275-432 (438)
162 PRK10504 putative transporter; 99.3 5.2E-11 1.1E-15 119.0 16.9 141 51-191 271-415 (471)
163 PRK11010 ampG muropeptide tran 99.3 2.4E-10 5.2E-15 114.1 21.0 155 63-222 245-404 (491)
164 PF11700 ATG22: Vacuole efflux 99.3 5.1E-11 1.1E-15 116.8 15.8 161 58-222 299-469 (477)
165 COG2271 UhpC Sugar phosphate p 99.3 1.4E-11 3.1E-16 113.5 10.6 128 291-431 52-181 (448)
166 PF06813 Nodulin-like: Nodulin 99.3 8E-11 1.7E-15 103.9 15.0 176 39-223 1-183 (250)
167 PRK11273 glpT sn-glycerol-3-ph 99.3 7.6E-11 1.6E-15 116.9 16.2 172 46-222 258-436 (452)
168 PRK15075 citrate-proton sympor 99.3 1.4E-10 3E-15 114.5 17.9 135 57-191 254-394 (434)
169 TIGR00900 2A0121 H+ Antiporter 99.3 2.3E-11 5E-16 117.2 12.2 130 62-191 232-363 (365)
170 TIGR00895 2A0115 benzoate tran 99.3 4.2E-11 9E-16 116.9 13.7 141 48-188 257-397 (398)
171 PRK12307 putative sialic acid 99.3 1.2E-10 2.5E-15 114.9 16.0 141 60-205 250-392 (426)
172 TIGR02718 sider_RhtX_FptX side 99.3 8.1E-11 1.8E-15 114.5 14.6 149 63-216 230-386 (390)
173 PRK15462 dipeptide/tripeptide 99.3 5.9E-11 1.3E-15 116.1 13.1 151 270-432 10-165 (493)
174 PRK15402 multidrug efflux syst 99.3 2.2E-10 4.7E-15 112.2 16.9 153 64-222 238-396 (406)
175 TIGR00887 2A0109 phosphate:H+ 99.2 2.4E-10 5.3E-15 114.9 16.8 167 59-226 306-493 (502)
176 KOG0637 Sucrose transporter an 99.2 6E-10 1.3E-14 103.6 17.8 368 54-435 45-474 (498)
177 TIGR00710 efflux_Bcr_CflA drug 99.2 6.3E-11 1.4E-15 115.1 11.6 131 289-432 26-156 (385)
178 PF01306 LacY_symp: LacY proto 99.2 1.1E-10 2.4E-15 110.1 12.7 149 74-227 257-406 (412)
179 TIGR00924 yjdL_sub1_fam amino 99.2 1E-10 2.3E-15 116.0 12.9 150 270-432 11-168 (475)
180 TIGR01272 gluP glucose/galacto 99.2 7.8E-10 1.7E-14 103.3 17.1 159 42-208 141-302 (310)
181 PRK10213 nepI ribonucleoside t 99.2 1.1E-09 2.5E-14 106.3 18.8 150 62-217 238-387 (394)
182 PRK10406 alpha-ketoglutarate t 99.2 1E-09 2.2E-14 108.2 18.5 157 61-223 263-425 (432)
183 KOG3762 Predicted transporter 99.2 6.9E-11 1.5E-15 111.7 9.5 164 258-434 360-525 (618)
184 PF07690 MFS_1: Major Facilita 99.2 7.9E-11 1.7E-15 112.9 10.2 131 289-432 17-148 (352)
185 PRK09584 tppB putative tripept 99.2 2.6E-10 5.6E-15 113.9 13.9 155 266-432 17-177 (500)
186 PRK11646 multidrug resistance 99.2 3.7E-10 8.1E-15 110.0 14.7 161 62-224 229-391 (400)
187 PRK10091 MFS transport protein 99.2 1.3E-09 2.7E-14 105.8 18.1 153 63-221 222-376 (382)
188 COG2270 Permeases of the major 99.2 4.1E-10 8.8E-15 104.1 13.6 172 41-217 254-425 (438)
189 TIGR00792 gph sugar (Glycoside 99.2 2.1E-10 4.6E-15 113.5 12.9 118 74-191 255-380 (437)
190 PLN00028 nitrate transmembrane 99.2 2.6E-10 5.5E-15 113.6 13.4 149 65-220 277-432 (476)
191 PF03825 Nuc_H_symport: Nucleo 99.2 8.5E-10 1.8E-14 106.1 16.5 175 51-225 217-399 (400)
192 TIGR00898 2A0119 cation transp 99.2 4.4E-10 9.6E-15 113.4 14.9 136 80-222 359-496 (505)
193 COG2223 NarK Nitrate/nitrite t 99.2 5.2E-10 1.1E-14 103.4 13.7 174 44-222 221-402 (417)
194 PRK10473 multidrug efflux syst 99.2 1.6E-10 3.5E-15 112.6 11.0 130 289-431 24-153 (392)
195 KOG2504 Monocarboxylate transp 99.2 2.9E-10 6.3E-15 112.1 12.8 177 41-221 298-476 (509)
196 TIGR00881 2A0104 phosphoglycer 99.2 3.4E-10 7.4E-15 109.6 12.8 153 46-203 221-379 (379)
197 PRK11902 ampG muropeptide tran 99.2 1.4E-09 3.1E-14 106.2 17.0 151 64-223 233-392 (402)
198 PRK08633 2-acyl-glycerophospho 99.1 9.5E-10 2.1E-14 122.3 17.4 148 64-215 256-404 (1146)
199 PRK10207 dipeptide/tripeptide 99.1 4.8E-10 1E-14 111.4 13.4 152 269-432 14-170 (489)
200 TIGR02332 HpaX 4-hydroxyphenyl 99.1 3.1E-10 6.7E-15 111.0 11.6 129 290-431 30-158 (412)
201 PRK11195 lysophospholipid tran 99.1 3E-09 6.5E-14 103.3 18.3 144 65-215 230-374 (393)
202 PRK15034 nitrate/nitrite trans 99.1 1.6E-09 3.5E-14 104.9 16.1 153 268-429 33-187 (462)
203 TIGR00896 CynX cyanate transpo 99.1 1E-09 2.2E-14 105.3 14.2 132 59-191 215-348 (355)
204 TIGR00886 2A0108 nitrite extru 99.1 4.8E-10 1.1E-14 108.1 12.0 147 272-431 4-152 (366)
205 TIGR00711 efflux_EmrB drug res 99.1 1.8E-10 4E-15 115.6 9.2 140 279-431 12-152 (485)
206 TIGR00903 2A0129 major facilit 99.1 4.2E-10 9.2E-15 107.8 10.9 132 289-435 12-143 (368)
207 PF02487 CLN3: CLN3 protein; 99.1 3.3E-08 7.1E-13 93.0 22.3 326 78-430 61-396 (402)
208 PRK06814 acylglycerophosphoeth 99.1 1.4E-09 3E-14 120.7 15.4 151 62-216 246-417 (1140)
209 PRK11102 bicyclomycin/multidru 99.1 5.5E-10 1.2E-14 108.2 10.5 131 289-432 12-142 (377)
210 PRK14995 methyl viologen resis 99.1 1.3E-09 2.8E-14 109.3 12.2 141 279-432 16-158 (495)
211 KOG0569 Permease of the major 99.0 1.7E-08 3.6E-13 97.5 18.9 185 38-228 267-461 (485)
212 PRK11043 putative transporter; 99.0 2.9E-09 6.4E-14 104.0 13.5 129 291-432 29-157 (401)
213 PRK11652 emrD multidrug resist 99.0 2.1E-09 4.5E-14 104.8 12.3 131 289-432 29-159 (394)
214 TIGR00901 2A0125 AmpG-related 99.0 1.9E-09 4.1E-14 103.5 11.6 118 58-175 226-355 (356)
215 KOG4686 Predicted sugar transp 99.0 9.9E-09 2.1E-13 89.3 14.4 178 39-222 265-443 (459)
216 TIGR00885 fucP L-fucose:H+ sym 99.0 3.4E-09 7.4E-14 103.3 12.8 148 274-431 8-156 (410)
217 COG0477 ProP Permeases of the 99.0 9.8E-09 2.1E-13 96.4 15.6 162 49-213 10-177 (338)
218 PRK10133 L-fucose transporter; 99.0 1.1E-08 2.4E-13 100.6 16.2 142 68-217 287-429 (438)
219 TIGR00769 AAA ADP/ATP carrier 99.0 2.9E-06 6.3E-11 82.6 32.2 277 42-334 8-334 (472)
220 KOG1330 Sugar transporter/spin 99.0 1.9E-10 4E-15 107.3 2.1 153 297-480 62-214 (493)
221 KOG3574 Acetyl-CoA transporter 99.0 7.4E-08 1.6E-12 87.4 18.4 367 38-434 28-434 (510)
222 TIGR00926 2A1704 Peptide:H+ sy 99.0 2.7E-07 5.8E-12 94.0 24.7 158 62-219 9-180 (654)
223 PRK15403 multidrug efflux syst 99.0 6E-09 1.3E-13 101.9 12.5 128 291-431 39-166 (413)
224 PF13347 MFS_2: MFS/sugar tran 99.0 1.5E-08 3.3E-13 99.7 15.5 146 46-191 230-384 (428)
225 KOG0253 Synaptic vesicle trans 99.0 5.7E-09 1.2E-13 94.2 10.9 134 86-226 391-524 (528)
226 TIGR01301 GPH_sucrose GPH fami 98.9 1.4E-08 3E-13 99.2 13.1 137 285-428 20-175 (477)
227 KOG2615 Permease of the major 98.9 1.5E-09 3.2E-14 98.5 5.8 119 298-430 63-181 (451)
228 TIGR00894 2A0114euk Na(+)-depe 98.9 1.8E-08 3.9E-13 100.5 13.9 176 43-221 263-450 (465)
229 KOG4332 Predicted sugar transp 98.9 2.6E-08 5.7E-13 85.9 12.6 319 59-412 55-387 (454)
230 PRK09848 glucuronide transport 98.9 5.6E-09 1.2E-13 103.5 9.9 130 62-191 249-388 (448)
231 TIGR00806 rfc RFC reduced fola 98.9 2.1E-08 4.6E-13 95.6 12.5 126 290-429 48-174 (511)
232 TIGR00805 oat sodium-independe 98.9 1.3E-08 2.9E-13 104.2 11.3 145 290-435 55-238 (633)
233 PTZ00207 hypothetical protein; 98.8 3.1E-08 6.6E-13 98.9 12.9 132 288-429 47-180 (591)
234 TIGR00788 fbt folate/biopterin 98.8 2.2E-08 4.8E-13 99.2 11.7 155 69-223 281-447 (468)
235 PRK09669 putative symporter Ya 98.8 5E-08 1.1E-12 96.6 12.7 117 76-192 264-389 (444)
236 PRK10429 melibiose:sodium symp 98.8 2.9E-08 6.4E-13 99.0 10.8 133 59-191 249-393 (473)
237 KOG3762 Predicted transporter 98.8 4.1E-08 9E-13 93.4 10.9 151 64-219 394-545 (618)
238 COG2807 CynX Cyanate permease 98.8 3.2E-07 6.9E-12 83.4 14.9 160 59-223 226-387 (395)
239 PF13000 Acatn: Acetyl-coenzym 98.8 1.5E-05 3.2E-10 76.0 26.4 382 45-433 4-469 (544)
240 KOG3764 Vesicular amine transp 98.7 7.2E-08 1.6E-12 88.4 9.6 158 58-220 287-453 (464)
241 TIGR00880 2_A_01_02 Multidrug 98.7 1.4E-08 3.1E-13 82.8 4.5 109 311-432 6-114 (141)
242 PF06779 DUF1228: Protein of u 98.7 3E-08 6.6E-13 70.5 5.3 81 53-133 4-84 (85)
243 COG0738 FucP Fucose permease [ 98.6 1.3E-06 2.7E-11 80.9 14.5 165 42-214 237-402 (422)
244 PF06609 TRI12: Fungal trichot 98.6 5.6E-07 1.2E-11 89.5 13.1 126 290-430 66-191 (599)
245 PF03209 PUCC: PUCC protein; 98.6 4.4E-06 9.5E-11 78.0 17.6 156 65-220 233-397 (403)
246 KOG0252 Inorganic phosphate tr 98.6 1.9E-07 4.2E-12 87.2 8.3 185 41-225 304-502 (538)
247 KOG2532 Permease of the major 98.6 3.6E-07 7.7E-12 89.4 10.1 127 298-435 68-194 (466)
248 PF05978 UNC-93: Ion channel r 98.5 2.1E-06 4.6E-11 70.1 12.6 110 80-190 41-150 (156)
249 COG3104 PTR2 Dipeptide/tripept 98.5 6.9E-07 1.5E-11 85.0 9.2 179 269-479 21-209 (498)
250 PF06813 Nodulin-like: Nodulin 98.5 2.3E-06 5E-11 75.9 11.7 135 285-429 19-155 (250)
251 PRK11462 putative transporter; 98.5 2.8E-06 6.2E-11 84.2 13.7 128 64-191 251-387 (460)
252 KOG1237 H+/oligopeptide sympor 98.5 0.00025 5.4E-09 71.2 27.4 177 37-218 33-242 (571)
253 KOG3810 Micronutrient transpor 98.5 9.7E-07 2.1E-11 79.4 9.1 340 63-418 27-375 (433)
254 COG2211 MelB Na+/melibiose sym 98.3 2.5E-05 5.5E-10 75.2 15.8 142 289-434 33-178 (467)
255 KOG0255 Synaptic vesicle trans 98.3 2.3E-06 5E-11 86.7 8.9 120 298-431 113-232 (521)
256 KOG0254 Predicted transporter 98.3 3.2E-05 7E-10 78.0 16.8 182 40-227 294-489 (513)
257 PF00083 Sugar_tr: Sugar (and 98.3 8.7E-09 1.9E-13 102.4 -8.9 163 58-227 270-442 (451)
258 PF03219 TLC: TLC ATP/ADP tran 98.2 0.0017 3.7E-08 63.9 27.1 282 38-335 21-351 (491)
259 KOG2533 Permease of the major 98.2 2.4E-06 5.2E-11 83.9 6.9 155 296-476 74-228 (495)
260 PF12832 MFS_1_like: MFS_1 lik 98.2 2.9E-06 6.3E-11 60.1 5.5 70 47-116 6-75 (77)
261 KOG2325 Predicted transporter/ 98.1 1E-05 2.2E-10 78.1 8.5 151 271-430 36-190 (488)
262 KOG1479 Nucleoside transporter 98.0 0.0007 1.5E-08 63.7 18.1 361 42-428 19-401 (406)
263 COG3202 ATP/ADP translocase [E 98.0 0.019 4.2E-07 55.2 27.6 277 39-334 25-353 (509)
264 KOG2816 Predicted transporter 98.0 0.00012 2.7E-09 71.5 12.7 125 66-191 267-392 (463)
265 PF00854 PTR2: POT family; In 97.9 0.00012 2.5E-09 70.7 11.0 107 107-218 2-120 (372)
266 PF07672 MFS_Mycoplasma: Mycop 97.7 0.00078 1.7E-08 59.0 12.7 244 161-425 2-262 (267)
267 PF12832 MFS_1_like: MFS_1 lik 97.7 5.6E-05 1.2E-09 53.6 4.2 56 280-335 11-67 (77)
268 PF05631 DUF791: Protein of un 97.7 0.0017 3.7E-08 60.1 14.2 122 296-431 62-189 (354)
269 TIGR00926 2A1704 Peptide:H+ sy 97.6 0.00093 2E-08 68.5 13.3 141 285-433 4-152 (654)
270 TIGR00939 2a57 Equilibrative N 97.6 0.0049 1.1E-07 60.3 17.4 115 304-424 308-427 (437)
271 KOG3880 Predicted small molecu 97.4 0.0022 4.7E-08 57.4 10.7 144 78-229 64-207 (409)
272 KOG2563 Permease of the major 97.3 0.0034 7.4E-08 59.5 12.1 131 293-432 69-203 (480)
273 PRK03612 spermidine synthase; 97.3 0.015 3.3E-07 58.3 17.5 122 67-190 41-170 (521)
274 PF02487 CLN3: CLN3 protein; 97.2 0.0044 9.6E-08 59.0 11.6 112 74-189 279-395 (402)
275 PF03137 OATP: Organic Anion T 97.1 8E-05 1.7E-09 74.7 -1.6 144 291-435 26-207 (539)
276 PF06963 FPN1: Ferroportin1 (F 96.9 0.016 3.4E-07 56.3 12.8 146 43-188 260-415 (432)
277 PF03092 BT1: BT1 family; Int 96.9 0.0037 8.1E-08 61.4 8.1 153 73-225 252-417 (433)
278 KOG3097 Predicted membrane pro 96.8 0.19 4.2E-06 45.8 17.2 99 87-186 69-178 (390)
279 KOG3626 Organic anion transpor 96.7 0.02 4.4E-07 58.4 11.5 184 297-482 126-349 (735)
280 KOG3098 Uncharacterized conser 96.6 0.054 1.2E-06 52.7 13.4 101 87-188 290-411 (461)
281 PRK03612 spermidine synthase; 96.5 0.078 1.7E-06 53.3 14.4 127 298-431 45-171 (521)
282 KOG2601 Iron transporter [Inor 96.3 0.033 7.1E-07 51.5 9.6 164 44-212 30-217 (503)
283 KOG0637 Sucrose transporter an 96.2 0.008 1.7E-07 57.1 5.2 133 288-426 52-200 (498)
284 TIGR00769 AAA ADP/ATP carrier 96.2 0.082 1.8E-06 52.0 12.3 43 389-431 149-191 (472)
285 COG0477 ProP Permeases of the 95.8 0.12 2.6E-06 47.7 11.7 132 289-431 23-158 (338)
286 PF01733 Nucleoside_tran: Nucl 95.6 0.0021 4.5E-08 60.1 -1.1 112 307-424 186-303 (309)
287 PF05978 UNC-93: Ion channel r 95.5 0.16 3.6E-06 41.6 9.5 108 309-430 43-150 (156)
288 PF01770 Folate_carrier: Reduc 94.7 0.28 6E-06 47.1 10.1 129 289-431 24-155 (412)
289 PF06779 DUF1228: Protein of u 94.1 0.085 1.8E-06 37.9 3.9 46 289-334 13-58 (85)
290 KOG3574 Acetyl-CoA transporter 93.8 0.46 9.9E-06 44.6 9.0 67 269-337 31-102 (510)
291 KOG1479 Nucleoside transporter 93.2 1.3 2.9E-05 42.2 11.3 36 368-405 117-152 (406)
292 TIGR00939 2a57 Equilibrative N 92.6 2.1 4.5E-05 42.1 12.3 110 79-189 310-432 (437)
293 PF03219 TLC: TLC ATP/ADP tran 91.3 5.2 0.00011 39.9 13.4 42 389-430 164-205 (491)
294 PF00854 PTR2: POT family; In 90.3 0.62 1.3E-05 44.9 6.0 63 369-432 34-99 (372)
295 COG4262 Predicted spermidine s 89.6 18 0.00039 33.9 14.6 94 63-156 29-132 (508)
296 KOG4332 Predicted sugar transp 89.1 5.1 0.00011 35.9 9.9 135 78-217 284-427 (454)
297 KOG4830 Predicted sugar transp 87.7 0.063 1.4E-06 47.0 -2.4 63 47-109 23-94 (412)
298 KOG3880 Predicted small molecu 83.6 4.2 9.1E-05 37.2 6.6 143 43-188 253-401 (409)
299 COG3202 ATP/ADP translocase [E 82.2 29 0.00064 34.2 12.2 43 389-431 168-210 (509)
300 PF01733 Nucleoside_tran: Nucl 81.7 0.51 1.1E-05 44.1 0.4 108 80-187 186-306 (309)
301 PF06912 DUF1275: Protein of u 79.6 41 0.00088 29.2 16.3 36 156-191 153-188 (209)
302 COG5336 Uncharacterized protei 78.3 7.6 0.00017 28.9 5.3 36 400-435 37-72 (116)
303 KOG3810 Micronutrient transpor 77.2 5.5 0.00012 37.2 5.4 96 78-173 273-370 (433)
304 PF13386 DsbD_2: Cytochrome C 75.7 51 0.0011 28.3 12.4 36 299-334 146-181 (199)
305 PF02990 EMP70: Endomembrane p 74.3 36 0.00078 34.5 10.9 28 308-335 302-329 (521)
306 KOG1277 Endosomal membrane pro 69.5 16 0.00036 35.1 6.6 25 311-335 335-359 (593)
307 KOG1237 H+/oligopeptide sympor 63.8 45 0.00097 34.2 9.1 144 289-435 58-223 (571)
308 KOG2601 Iron transporter [Inor 63.1 92 0.002 29.9 10.0 27 406-432 176-202 (503)
309 PF07672 MFS_Mycoplasma: Mycop 62.3 1.1E+02 0.0024 27.6 10.0 100 79-179 144-253 (267)
310 COG1230 CzcD Co/Zn/Cd efflux s 61.2 1.4E+02 0.003 27.6 14.8 83 37-125 21-106 (296)
311 COG3619 Predicted membrane pro 59.0 1.3E+02 0.0028 26.5 17.8 152 40-191 11-194 (226)
312 PF11947 DUF3464: Protein of u 58.6 18 0.0004 29.3 4.2 48 367-418 96-143 (153)
313 PF03547 Mem_trans: Membrane t 58.1 1.8E+02 0.0039 28.0 17.0 22 261-282 237-258 (385)
314 PF07857 DUF1632: CEO family ( 58.1 76 0.0016 28.5 8.4 13 286-298 195-208 (254)
315 PF11947 DUF3464: Protein of u 57.6 44 0.00095 27.2 6.2 51 127-180 95-145 (153)
316 PF02694 UPF0060: Uncharacteri 52.9 21 0.00045 26.8 3.4 52 75-126 53-104 (107)
317 COG5336 Uncharacterized protei 50.8 47 0.001 24.9 4.9 27 82-108 48-75 (116)
318 PRK02237 hypothetical protein; 45.5 37 0.0008 25.6 3.7 51 76-126 56-106 (109)
319 PF11151 DUF2929: Protein of u 45.3 87 0.0019 20.6 5.8 28 197-224 29-56 (57)
320 COG4721 ABC-type cobalt transp 45.0 1.8E+02 0.0038 24.0 13.7 86 55-149 25-111 (192)
321 COG2836 Uncharacterized conser 44.6 2.2E+02 0.0047 25.0 12.2 33 299-331 160-192 (232)
322 KOG1278 Endosomal membrane pro 43.2 12 0.00027 36.9 1.3 33 300-332 356-392 (628)
323 COG4769 Predicted membrane pro 42.1 47 0.001 27.2 4.1 56 85-146 82-137 (181)
324 PRK10263 DNA translocase FtsK; 41.1 2.7E+02 0.0059 31.6 10.8 16 176-191 142-157 (1355)
325 PF07760 DUF1616: Protein of u 39.5 3.1E+02 0.0067 25.3 11.2 58 132-190 22-79 (287)
326 PF11299 DUF3100: Protein of u 38.9 23 0.0005 30.9 2.1 52 136-188 178-229 (241)
327 COG2119 Predicted membrane pro 38.9 2.3E+02 0.0051 23.9 7.7 78 42-121 101-179 (190)
328 PHA02902 putative IMV membrane 37.5 46 0.00099 22.1 2.8 9 471-479 19-27 (70)
329 PF10027 DUF2269: Predicted in 35.8 1.8E+02 0.004 23.5 7.0 20 416-435 53-72 (150)
330 PTZ00370 STEVOR; Provisional 34.3 96 0.0021 28.1 5.2 20 465-484 268-287 (296)
331 PF06645 SPC12: Microsomal sig 34.2 1.1E+02 0.0023 21.6 4.5 15 418-432 20-34 (76)
332 COG4262 Predicted spermidine s 34.1 4.3E+02 0.0093 25.3 12.9 60 367-429 104-163 (508)
333 PF02632 BioY: BioY family; I 33.4 1.5E+02 0.0033 24.0 6.0 26 83-108 60-85 (148)
334 PF06645 SPC12: Microsomal sig 32.7 1.5E+02 0.0033 20.8 5.1 38 167-212 10-47 (76)
335 PF11833 DUF3353: Protein of u 31.2 3.1E+02 0.0067 23.5 7.7 31 160-190 136-166 (194)
336 PF12805 FUSC-like: FUSC-like 30.9 4E+02 0.0087 24.4 9.1 38 109-146 2-40 (284)
337 PF10785 NADH-u_ox-rdase: NADH 29.7 1.4E+02 0.003 21.6 4.6 41 89-129 31-78 (86)
338 TIGR01478 STEVOR variant surfa 29.2 1.1E+02 0.0023 27.8 4.6 18 465-482 272-289 (295)
339 KOG4112 Signal peptidase subun 28.9 1.8E+02 0.0038 21.3 4.8 24 408-432 26-49 (101)
340 COG1268 BioY Uncharacterized c 28.3 1.6E+02 0.0034 25.0 5.4 23 83-105 89-111 (184)
341 PRK13629 threonine/serine tran 27.8 6.1E+02 0.013 25.2 13.6 49 159-217 18-66 (443)
342 PF12805 FUSC-like: FUSC-like 27.8 3.1E+02 0.0066 25.2 7.8 14 371-384 26-39 (284)
343 TIGR00836 amt ammonium transpo 27.8 4.7E+02 0.01 25.6 9.2 49 137-185 283-331 (403)
344 PF03606 DcuC: C4-dicarboxylat 27.2 4.4E+02 0.0096 26.4 9.2 21 202-222 4-24 (465)
345 TIGR03644 marine_trans_1 proba 27.0 6.1E+02 0.013 24.8 12.7 48 137-185 297-344 (404)
346 PRK10263 DNA translocase FtsK; 26.9 3.6E+02 0.0077 30.8 8.9 19 415-433 141-159 (1355)
347 TIGR00801 ncs2 uracil-xanthine 25.4 6.5E+02 0.014 24.7 10.6 96 69-165 31-130 (415)
348 KOG4830 Predicted sugar transp 25.1 91 0.002 28.1 3.5 48 289-336 38-94 (412)
349 PF03547 Mem_trans: Membrane t 24.4 1.4E+02 0.003 28.8 5.1 10 321-330 13-22 (385)
350 KOG3097 Predicted membrane pro 24.1 2.6E+02 0.0057 26.4 6.3 108 269-396 29-137 (390)
351 COG0861 TerC Membrane protein 24.0 5.4E+02 0.012 23.2 16.2 61 140-207 27-87 (254)
352 PF11368 DUF3169: Protein of u 24.0 5.3E+02 0.011 23.1 10.2 22 165-186 10-31 (248)
353 PLN02776 prenyltransferase 23.8 6.2E+02 0.013 24.1 8.9 25 104-128 74-98 (341)
354 PF04346 EutH: Ethanolamine ut 23.8 6.4E+02 0.014 24.0 11.0 126 78-212 49-178 (354)
355 PRK10457 hypothetical protein; 22.8 3E+02 0.0064 19.8 7.1 40 175-217 37-76 (82)
356 PF04226 Transgly_assoc: Trans 22.8 2.1E+02 0.0045 18.0 5.3 22 197-218 22-43 (48)
357 PF10066 DUF2304: Uncharacteri 21.9 3.7E+02 0.0081 20.6 6.9 18 417-434 45-62 (115)
358 PF06679 DUF1180: Protein of u 21.5 1.1E+02 0.0025 25.2 3.2 19 453-471 94-112 (163)
359 PF10183 ESSS: ESSS subunit of 21.4 1.2E+02 0.0027 22.9 3.2 29 197-225 57-85 (105)
360 PF02447 GntP_permease: GntP f 21.1 8.2E+02 0.018 24.3 9.8 35 298-335 54-97 (441)
361 PF07857 DUF1632: CEO family ( 21.0 4.6E+02 0.0099 23.7 7.2 10 424-433 94-103 (254)
362 COG5528 Predicted integral mem 21.0 2.4E+02 0.0052 22.0 4.5 45 420-480 60-104 (155)
363 TIGR02230 ATPase_gene1 F0F1-AT 21.0 3.7E+02 0.008 20.2 7.1 43 168-211 46-88 (100)
364 PF13440 Polysacc_synt_3: Poly 20.8 5.7E+02 0.012 22.3 16.4 32 153-184 109-140 (251)
365 PF04281 Tom22: Mitochondrial 20.2 1.6E+02 0.0034 23.6 3.6 24 153-176 59-82 (137)
No 1
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.4e-44 Score=323.24 Aligned_cols=384 Identities=18% Similarity=0.223 Sum_probs=315.9
Q ss_pred cccchhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHH
Q 010744 34 RKVLGISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGI 113 (502)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 113 (502)
..+++|+.++..+++++...++.+..++.+.|.+.+|.++|.+|+|++.+++.+.|.++..+.|.++||.+.|+.+.+++
T Consensus 22 ~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gL 101 (448)
T COG2271 22 TYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGL 101 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHH
Confidence 34567888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHH--HHHhhh
Q 010744 114 LCWAFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLA--TIMAGH 191 (502)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~--~~l~~~ 191 (502)
++.++..++++++++.+.+.+..+++|..+|..+|++...+..|++++|||+..++++++.++|..+.|++. +++..+
T Consensus 102 ilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~ 181 (448)
T COG2271 102 ILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFH 181 (448)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 888776
Q ss_pred cccCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHH
Q 010744 192 QFWGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTF 271 (502)
Q Consensus 192 ~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (502)
.+||..|++.++++++++++.++..+|+|+..--++-||-+.|..+...++++.+..+.++.. .+.+++||.+
T Consensus 182 -----~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~--~~YVL~Nk~i 254 (448)
T COG2271 182 -----GGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIF--VKYVLKNKLI 254 (448)
T ss_pred -----cchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHH--HHHHHcChHH
Confidence 799999999999999999999998888766554443333332322221222222213333333 3458999999
Q ss_pred HHHHHHHHhhhhh-hhhHHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhc--cccCCcchhHHhhhhh
Q 010744 272 QIIVLQGIVGSLP-WTAMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRIS--QAYPHSGRVMCAQFSA 347 (502)
Q Consensus 272 ~~~~~~~~~~~~~-~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g--~~~~~~~~~~~~~~~~ 347 (502)
|.+.+..++.... +++..|.|.|+.+ .|+|..+++...+.+-.++++|.+++||++||+- ||.+ ...+ .
T Consensus 255 W~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p------~~~i-~ 327 (448)
T COG2271 255 WLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGP------MALI-F 327 (448)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccch------HHHH-H
Confidence 9998888776665 7777999999988 9999999999999999999999999999999974 5543 1111 1
Q ss_pred hhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhh-hhhhhHHHHH
Q 010744 348 FMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGS-FSSFAAPLVG 426 (502)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-~~~~~~~~~g 426 (502)
.+.+.++.+.+...+. .+..+..++++..|+......- +......|+.|.+..|++.|+...+.++ |.+.+....|
T Consensus 328 ~~~i~~~~~~~w~~~~--~~~~l~~~~l~~iGf~IyGPqm-LiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g 404 (448)
T COG2271 328 MLLITASLVLYWLAPN--GSYLLDAILLFIIGFLIYGPQM-LIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLG 404 (448)
T ss_pred HHHHHHHHHHHHcCCC--ccHHHHHHHHHHHHHHHhhHHH-HHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcce
Confidence 1222222222222222 2356677888888888776664 6677788999999999999999999999 7779999999
Q ss_pred HHHHHhcCC
Q 010744 427 ILSEKMFGY 435 (502)
Q Consensus 427 ~l~~~~~~~ 435 (502)
++.|. .+|
T Consensus 405 ~i~d~-~gW 412 (448)
T COG2271 405 YIADT-WGW 412 (448)
T ss_pred eeEec-CCC
Confidence 99998 555
No 2
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5e-41 Score=309.56 Aligned_cols=354 Identities=19% Similarity=0.240 Sum_probs=289.0
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHH
Q 010744 37 LGISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCW 116 (502)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 116 (502)
+..+..+..+.++.|..+........++|++++|+|+|..+.|++.|.|.++.++++|+...+.||+.||++++..+.++
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lF 88 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALF 88 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH
Confidence 45667788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCc
Q 010744 117 AFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGV 196 (502)
Q Consensus 117 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~ 196 (502)
.++++++++++||+.++++|++.|+..|.+++...++..+..||++|++++++...+..++.++|.+++.++.+.
T Consensus 89 i~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~----- 163 (394)
T COG2814 89 IVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQL----- 163 (394)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHH-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHH
Q 010744 197 PGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVL 276 (502)
Q Consensus 197 ~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (502)
.|||++|+..+.++++..+..+...| |+....+. ....++..+++|+|..+...+
T Consensus 164 ~GWR~~F~~ia~l~ll~~~~~~~~lP-~~~~~~~~------------------------~~~~~~~~~~l~~p~v~~~l~ 218 (394)
T COG2814 164 FGWRATFLAIAVLALLALLLLWKLLP-PSEISGSL------------------------PGPLRTLLRLLRRPGVLLGLL 218 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCC-CccCCCCC------------------------CcchhHHHHHhcCchHHHHHH
Confidence 99999999999999999998888777 22221111 111233445778888887777
Q ss_pred HHHhhhh-hhhhHHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHH
Q 010744 277 QGIVGSL-PWTAMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFS 354 (502)
Q Consensus 277 ~~~~~~~-~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 354 (502)
..++... .+..++|+..++++ .|+|....++++..+++++++|+.++|++.|| +.|+.. .......
T Consensus 219 ~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l-----------~~~~~l~ 286 (394)
T COG2814 219 ATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRAL-----------IAALLLL 286 (394)
T ss_pred HHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHH-----------HHHHHHH
Confidence 6666544 56667898888877 99999999999999999999999999999999 665521 1111111
Q ss_pred HHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcC
Q 010744 355 WFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFG 434 (502)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~ 434 (502)
.+.+..+....++.+......++.|+....... .......+.. ++.+..+.+++....|+|.++|..++|.+.|+ .+
T Consensus 287 a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~-~~~~~~a~~~-p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~-~g 363 (394)
T COG2814 287 ALALLALTFTGASPALALALLFLWGFAFSPALQ-GLQTRLARLA-PDAADLAGSLNVAAFNLGIALGAALGGLVLDA-LG 363 (394)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhh-HHHHHhcccC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hc
Confidence 111111222222234444555556766655544 3444445533 48899999999999999999999999999999 54
Q ss_pred C
Q 010744 435 Y 435 (502)
Q Consensus 435 ~ 435 (502)
+
T Consensus 364 ~ 364 (394)
T COG2814 364 Y 364 (394)
T ss_pred h
Confidence 4
No 3
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=7.5e-41 Score=331.96 Aligned_cols=379 Identities=17% Similarity=0.178 Sum_probs=278.3
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHH
Q 010744 36 VLGISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILC 115 (502)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 115 (502)
.+..+.++..+++.+++.+.++..+++..|.+.+|+|++.++.|++.+++.+++.+++++.|+++||+|||+++..+.++
T Consensus 24 ~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~ 103 (467)
T PRK09556 24 FKPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLIL 103 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHH
Confidence 44566778888899999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHh-----hhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhh
Q 010744 116 WAFSTAAVGA-----SQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAG 190 (502)
Q Consensus 116 ~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 190 (502)
++++.++.++ ++|++.+++.|+++|++.+...|...+++.||+|+++|++++|++..+.++|.++++++..++..
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~ 183 (467)
T PRK09556 104 SAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGAN 183 (467)
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHH
Confidence 8887776665 58999999999999999999999999999999999999999999999999999999999877665
Q ss_pred hcccCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchh-hHhhhcCCCcchhHHHhHHHHhhhcchh
Q 010744 191 HQFWGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRD-ELVEKGNTSVSSVWLESWMATKAVIKVP 269 (502)
Q Consensus 191 ~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (502)
.. ...+||..|.+.+++.++.+++.+++.+++++.....++++ ..+.. ..+....+..+...++. -.+..+++|
T Consensus 184 ~~--~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~ 258 (467)
T PRK09556 184 YF--FDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEE-IFGEPISEEDKETESTDMTKWQI--FVEYVLKNP 258 (467)
T ss_pred hh--ccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhh-cccCccchhhhccccccCcHHHH--HHHHHHcCh
Confidence 30 01269999999898888887777766555433221111111 00000 00000000001111111 122367888
Q ss_pred HHHHHHHHHHhhhhhh-hhHHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhh
Q 010744 270 TFQIIVLQGIVGSLPW-TAMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSA 347 (502)
Q Consensus 270 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 347 (502)
.+|...+..++....+ +..+|+|.|+++ +|++..+++.......++.+++.+++|+++||+++|+.. ... .
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~-----~~~--~ 331 (467)
T PRK09556 259 VIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRAL-----VAC--I 331 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchH-----HHH--H
Confidence 8888777766655543 444789999976 999999999999999999999999999999999998742 111 1
Q ss_pred hhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhh-hhhhhHHHHH
Q 010744 348 FMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGS-FSSFAAPLVG 426 (502)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-~~~~~~~~~g 426 (502)
......... .......+ .....+..++.|+....... .......|.+|++.+|++.|+.+..+++ +++++|.+.|
T Consensus 332 ~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G 407 (467)
T PRK09556 332 ALALIIFTL--GVYQHATS-EYMYLASLFALGFLVFGPQL-LIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLG 407 (467)
T ss_pred HHHHHHHHH--HHHHhcCc-HHHHHHHHHHHHHHHhhHHH-HHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHH
Confidence 111111111 11111222 23333455555644322222 1235667999999999999999999997 6689999999
Q ss_pred HHHH
Q 010744 427 ILSE 430 (502)
Q Consensus 427 ~l~~ 430 (502)
.+.|
T Consensus 408 ~i~~ 411 (467)
T PRK09556 408 MIAD 411 (467)
T ss_pred HHhc
Confidence 9999
No 4
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-40 Score=302.62 Aligned_cols=387 Identities=33% Similarity=0.530 Sum_probs=305.2
Q ss_pred cccchhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHH
Q 010744 34 RKVLGISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGI 113 (502)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 113 (502)
...+..++.+.++++...++..|++.+....+.+++.||++++..|++.+.+.+.+.+++|+.|+++|||+||+++.+|.
T Consensus 26 ~~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~ 105 (493)
T KOG1330|consen 26 LSMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGI 105 (493)
T ss_pred cccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHH
Confidence 34466778889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcc
Q 010744 114 LCWAFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQF 193 (502)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~ 193 (502)
.++.++.++++++..||+++++|.+.|+|.+.+.|.++++++|.+|..+|++++++++.+.++|..+|.+++..+.+..
T Consensus 106 ~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~- 184 (493)
T KOG1330|consen 106 FIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLT- 184 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998872
Q ss_pred cCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHH
Q 010744 194 WGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQI 273 (502)
Q Consensus 194 ~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (502)
..|||.|+..++++++++++.+++.+||++....+.+.+.+. ..+... .+++.+.+.|++.+..
T Consensus 185 ---~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~---------~~~~ts----~~kDl~~l~~~~v~v~ 248 (493)
T KOG1330|consen 185 ---FWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKM---------VKPFTS----VWKDLKVLAKIKVFVL 248 (493)
T ss_pred ---cceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCcC---------CCCccc----hHHHHHHHHccCceee
Confidence 349999999999999999999999999886533221111100 111222 3344445556566555
Q ss_pred HHHHHHhhhhhhhhHH-HHHHHHH----HhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhh
Q 010744 274 IVLQGIVGSLPWTAMV-FFTMWFE----LIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAF 348 (502)
Q Consensus 274 ~~~~~~~~~~~~~~~~-~~~~~~~----~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 348 (502)
..+......+..+.+. |.|.+.+ -.|++..+..++..+...++.+|.+.+|.++||+.++.+...+.........
T Consensus 249 ~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~ 328 (493)
T KOG1330|consen 249 SSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAA 328 (493)
T ss_pred ehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHh
Confidence 5555555544444443 3454443 3677777777778888999999999999999998775555444444444444
Q ss_pred hhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhh-hHHHHHH
Q 010744 349 MGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSF-AAPLVGI 427 (502)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~-~~~~~g~ 427 (502)
++.......+...+..........+.++++|....+.......-+..|++|++.|.++.++...+..+.+.. +|++.|.
T Consensus 329 ~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGi 408 (493)
T KOG1330|consen 329 LGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGI 408 (493)
T ss_pred hhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehh
Confidence 444444444444443333344455666777776666555456778889999999999999999888887774 5559999
Q ss_pred HHHHhcCCCC
Q 010744 428 LSEKMFGYDS 437 (502)
Q Consensus 428 l~~~~~~~~~ 437 (502)
+.|+..+|++
T Consensus 409 lsd~l~g~~~ 418 (493)
T KOG1330|consen 409 LSDKLRGYKP 418 (493)
T ss_pred HHHHhhCCCc
Confidence 9999998875
No 5
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=8.7e-40 Score=318.55 Aligned_cols=386 Identities=11% Similarity=0.103 Sum_probs=280.4
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHH
Q 010744 37 LGISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCW 116 (502)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 116 (502)
|.+|..+..+++.++++++|+...+...|.+.+|+|++.++.|++.+++.+++++++++.|+++||+|||+++..+++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 45788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcc-cC
Q 010744 117 AFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQF-WG 195 (502)
Q Consensus 117 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~-~~ 195 (502)
+++.+++++++|++++++.|+++|++.+...+....++.|++|+++|++++++++.+.++|.++++.+++++.+... .+
T Consensus 84 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 163 (412)
T TIGR02332 84 GIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMA 163 (412)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998874210 12
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhc----CCCc--chhHHHhHHHHhhhcchh
Q 010744 196 VPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKG----NTSV--SSVWLESWMATKAVIKVP 269 (502)
Q Consensus 196 ~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~ 269 (502)
..|||+.|++.++++++..++.+++.||+++..+..++++++...+..+... ..++ ...........++++ ++
T Consensus 164 ~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 242 (412)
T TIGR02332 164 LKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-TP 242 (412)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-Ch
Confidence 2699999999998888877777666666543321111111100000000000 0000 000000112233344 45
Q ss_pred HHHHHHHHHHhhhhh-hhhHHHHHHHHHHh--CCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhh
Q 010744 270 TFQIIVLQGIVGSLP-WTAMVFFTMWFELI--GFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFS 346 (502)
Q Consensus 270 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 346 (502)
.++...+..++.... +...+|+|.+++++ |++..+++.......++.+++.++.|+++||+++|+.. .. ..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~-----~~-~~ 316 (412)
T TIGR02332 243 AIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHH-----TA-LP 316 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHH-----HH-HH
Confidence 666665555554444 44448999999874 67888899999999999999999999999999977631 11 11
Q ss_pred hhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHH
Q 010744 347 AFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVG 426 (502)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g 426 (502)
....... ..+.. ..... .. ....+.+.+++.....+ .......|.+|++.|+++.|+.+...++|++++|.+.|
T Consensus 317 ~~~~~~~--~~~~~-~~~~~-~~-~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g 390 (412)
T TIGR02332 317 YLFAAAG--WLLAS-ATDHN-LI-QLLGIIMASMGSFSAMA-IFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIG 390 (412)
T ss_pred HHHHHHH--HHHHH-hcCCH-HH-HHHHHHHHHHHhhhhhh-HHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcc
Confidence 1111111 11111 11111 11 11122222333322222 23445567789999999999999999999999999999
Q ss_pred HHHHHhcCC
Q 010744 427 ILSEKMFGY 435 (502)
Q Consensus 427 ~l~~~~~~~ 435 (502)
.+.|..++|
T Consensus 391 ~i~~~~g~~ 399 (412)
T TIGR02332 391 ILKDATGSF 399 (412)
T ss_pred cccccCCCC
Confidence 999997766
No 6
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=1.6e-38 Score=308.64 Aligned_cols=350 Identities=18% Similarity=0.196 Sum_probs=270.0
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHH
Q 010744 37 LGISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCW 116 (502)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 116 (502)
+++|..+..+.++.+....+.....+++|.+.+|+|.++++.|++.+.+.+++.+++++.|++.||+|||+++..+.++.
T Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 84 (390)
T PRK03545 5 KVAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLF 84 (390)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 44565556666665555455455667789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCc
Q 010744 117 AFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGV 196 (502)
Q Consensus 117 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~ 196 (502)
+++++++++++|++++++.|+++|++.+...+...+++.|++|+++|++++|+...+.++|.+++|++++.+.+.
T Consensus 85 ~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~----- 159 (390)
T PRK03545 85 IASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQY----- 159 (390)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHH-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHH
Q 010744 197 PGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVL 276 (502)
Q Consensus 197 ~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (502)
.|||+.|++.++++++..+..+...|+++++++ . ..++.++.+|+|.++....
T Consensus 160 ~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~-----------------------~----~~~~~~~~~~~~~~~~~~~ 212 (390)
T PRK03545 160 LGWRTTFLAIGGGALITLLLLIKLLPLLPSEHS-----------------------G----SLKSLPLLFRRPALVSLYL 212 (390)
T ss_pred hcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCc-----------------------c----hHHHHHHHHhCcHHHHHHH
Confidence 899999999998887776666655544321100 0 0122345677777765544
Q ss_pred HHHhh-hhhhhhHHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHH
Q 010744 277 QGIVG-SLPWTAMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFS 354 (502)
Q Consensus 277 ~~~~~-~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 354 (502)
..++. ...+...++.|.++++ .|.+..+++.+.+...++.++++++.+++.||+++|.. .......... .
T Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~-------~~~~~~~~~~-~ 284 (390)
T PRK03545 213 LTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFL-------LIAIALLLVC-L 284 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH-------HHHHHHHHHH-H
Confidence 43333 2333445677777776 79999999999999999999999999999999987641 1111111111 1
Q ss_pred HHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 355 WFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
.... ...++ .+......++.|++.....+ .....+.+..| +.+++++|+.+...++|..+||.+.|.+.|..
T Consensus 285 -~~l~--~~~~~-~~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~ 356 (390)
T PRK03545 285 -LLLL--PAANS-EWHLSVLSIFWGIAIMCIGL-AMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHL 356 (390)
T ss_pred -HHHH--HHhch-HHHHHHHHHHHHHHHhcchH-HHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 1111 11122 33444566677777655444 45666777766 68899999999999999999999999999985
No 7
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=2.1e-38 Score=311.42 Aligned_cols=379 Identities=16% Similarity=0.180 Sum_probs=275.6
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHH
Q 010744 37 LGISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCW 116 (502)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 116 (502)
+.++.+....++.+++..++....+..+|.+.+++|++.++.|++.+.+.+++.+++++.|++.||+|||+++.++.++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~ 98 (434)
T PRK11663 19 YWRRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIAT 98 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHH
Confidence 44566777788888888888888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCc
Q 010744 117 AFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGV 196 (502)
Q Consensus 117 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~ 196 (502)
+++.+++++++|++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++++.+++++.+.
T Consensus 99 ~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~----- 173 (434)
T PRK11663 99 GIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALH----- 173 (434)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHhccCCccccC-CCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHH
Q 010744 197 PGWRCAFILMATLSVLIAFLVLVFVVDPRKKAS-TFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIV 275 (502)
Q Consensus 197 ~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (502)
.+||+.|++.+++.++..++.++..+|++.... +..+++++ +..+... +.++.+.++++..+ +..++++.++...
T Consensus 174 ~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 249 (434)
T PRK11663 174 YGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRH-DALELAQ-QQEGAGLSRKEILT--KYVLLNPYIWLLS 249 (434)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccc-cccccch-hccccCCChhhhHH--HHHhcChHHHHHH
Confidence 899999999988877666555544444332211 11110000 0000000 00001111222111 1256778877776
Q ss_pred HHHHhhhhhhhh-HHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhH
Q 010744 276 LQGIVGSLPWTA-MVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPF 353 (502)
Q Consensus 276 ~~~~~~~~~~~~-~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 353 (502)
+..+.....+.. .+|+|.|+++ +|++..+++...+...+++++++++.|++.||+.+++... .......+...
T Consensus 250 ~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~-~~~~~~~~~~~---- 324 (434)
T PRK11663 250 FSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGP-MNLIFAAGILL---- 324 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccH-HHHHHHHHHHH----
Confidence 655554444433 4789999965 8999999999999999999999999999999994332100 00111111111
Q ss_pred HHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 354 SWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
....+...+.. + ........+..|++...... .......|..|++.|++++|+.+.+.++|++++|.+.|.+.|..
T Consensus 325 ~~~~~~~~~~~-~-~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~ 400 (434)
T PRK11663 325 SVGSLWLMPFA-S-YVMQAACFFTIGFFVFGPQM-LIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIW 400 (434)
T ss_pred HHHHHHHcccc-c-HHHHHHHHHHHHHHHhhHHH-HHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhc
Confidence 11111112222 2 22222333334443221111 23456678899999999999999999999999999999999985
No 8
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=6.6e-38 Score=306.51 Aligned_cols=363 Identities=17% Similarity=0.166 Sum_probs=277.2
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHH
Q 010744 36 VLGISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILC 115 (502)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 115 (502)
.+++|.++.++++..++++++....+...|.+.+|+|.++.+.+++.+.+.++..+++++.|+++||+|||+++..+.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 89 (406)
T PRK11551 10 SSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVAL 89 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH
Confidence 46788888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccC
Q 010744 116 WAFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWG 195 (502)
Q Consensus 116 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~ 195 (502)
.+++.+++++++|++.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.++..+.+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~---- 165 (406)
T PRK11551 90 FGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGD---- 165 (406)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999888776
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHH
Q 010744 196 VPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIV 275 (502)
Q Consensus 196 ~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (502)
.+||+.|++.+++.++..++..+..||++....++++++. ++...+...+. .+.+..+...
T Consensus 166 -~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--------------~~~~~~~~~~~----~~~~~~~~~~ 226 (406)
T PRK11551 166 -AAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQ--------------RAPVLRALFGE----GRATATLLLW 226 (406)
T ss_pred -cCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchh--------------hhhhHHHHhhh----hhhhHHHHHH
Confidence 8999999998877666666555555554322111100000 00000111100 0111122222
Q ss_pred HHHHhh-hhhhhhHHHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHH
Q 010744 276 LQGIVG-SLPWTAMVFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFS 354 (502)
Q Consensus 276 ~~~~~~-~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 354 (502)
...+.. ...+....|.|.++++.|+++.+.+...+...++.++++++.|++.||+++|+.. . .+..... ..
T Consensus 227 ~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~-----~--~~~~~~~-~~ 298 (406)
T PRK11551 227 ISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVV-----L--LIYAGIL-AS 298 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH-----H--HHHHHHH-HH
Confidence 222222 2233344788999999999999999999999999999999999999999988732 1 1111111 11
Q ss_pred HHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcC
Q 010744 355 WFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFG 434 (502)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~ 434 (502)
...+ ...++ .+...+..++.|++.+...+ ...++..|.+|+++|+++.|+.+...++++.++|.+.|.+.++.++
T Consensus 299 ~~~~---~~~~~-~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~ 373 (406)
T PRK11551 299 LAAL---AAAPS-FAGMLLAGFAAGLFVVGGQS-VLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRS 373 (406)
T ss_pred HHHH---HhcCc-HHHHHHHHHHHHHHHHhHHH-HHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCc
Confidence 1111 11122 22334455566766655555 5678889999999999999999999999999999999999987543
No 9
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=3.3e-37 Score=307.50 Aligned_cols=374 Identities=14% Similarity=0.156 Sum_probs=289.1
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHH
Q 010744 38 GISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWA 117 (502)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 117 (502)
++|..+..++++.++...|.+.++..+|.+.+|+|.+.++.+|+.+.|.+++.++.+++|+++||+|||++++.+.++++
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~ 82 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFG 82 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 46788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhcc-CCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCc
Q 010744 118 FSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSY-KDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGV 196 (502)
Q Consensus 118 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~ 196 (502)
++++++++++|++.++++|+++|++.+...+.....+.+++ |+++|++++|++.....+|..+||.+++++.++
T Consensus 83 ~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~----- 157 (495)
T PRK14995 83 LASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH----- 157 (495)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----
Confidence 99999999999999999999999999999998888887776 678999999999999999999999999999987
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhH------------h-hhcCCCcchh---------
Q 010744 197 PGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDEL------------V-EKGNTSVSSV--------- 254 (502)
Q Consensus 197 ~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~-~~~~~~~~~~--------- 254 (502)
.+|||.|++...++++..++.++..|+++.... ++.+.... . ..........
T Consensus 158 ~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~------~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 231 (495)
T PRK14995 158 FYWGSVFLINVPIVLVVMGLTARYVPRQAGRRD------QPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLT 231 (495)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC------CCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHH
Confidence 899999999988887777766666655432111 11111100 0 0000000000
Q ss_pred ---------HHHhHHH----HhhhcchhHHHHHHHHHHhhhhhhh-hHHHHHHHHHH-hCCChhhHHHHHHHHHhhhccc
Q 010744 255 ---------WLESWMA----TKAVIKVPTFQIIVLQGIVGSLPWT-AMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVG 319 (502)
Q Consensus 255 ---------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~ 319 (502)
.++.... ..+++|+|.+....+..+.....+. ...+.|.|+++ +|+++.++|+...+..++..++
T Consensus 232 ~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~ 311 (495)
T PRK14995 232 GALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFS 311 (495)
T ss_pred HHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 0000000 0246778877776666555544433 34678999988 8999999999999999999999
Q ss_pred ccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccC
Q 010744 320 SFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVP 399 (502)
Q Consensus 320 ~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p 399 (502)
.++.|++.||+++|+. ...+..+..... ..+.......+ .+......++.|++.+...+ .......+..|
T Consensus 312 ~~~~g~l~~r~g~~~~-------~~~g~~~~~~~~-~~l~~~~~~~~-~~~~~~~~~l~G~g~g~~~~-~~~~~~~~~~~ 381 (495)
T PRK14995 312 GPIAGILVSRLGLRLV-------ATGGMALSALSF-YGLAMTDFSTQ-QWQAWGLMALLGFSAASALL-ASTSAIMAAAP 381 (495)
T ss_pred HHHHHHHHHHcCchHH-------HHHHHHHHHHHH-HHHHHhcCCCc-hHHHHHHHHHHHHhHHHHHH-HHHHHHHhcCC
Confidence 9999999999998762 122222221111 11111122222 23344567778888887766 46677778899
Q ss_pred CCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 400 AKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 400 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
+++++.+.++.++..++|+.+|+.+.|.+.++.
T Consensus 382 ~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~~ 414 (495)
T PRK14995 382 PEKAAAAGAIETMAYELGAGLGIAIFGLLLSRS 414 (495)
T ss_pred HHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998864
No 10
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=2.7e-37 Score=304.19 Aligned_cols=366 Identities=16% Similarity=0.220 Sum_probs=267.8
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHH
Q 010744 37 LGISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCW 116 (502)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 116 (502)
++++..+..+.++++.+.++.....+..|.+.+++|+++.+.+++.+++.+++.+++++.|+++||+|||+++..+.++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~ 93 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 45666778888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCc
Q 010744 117 AFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGV 196 (502)
Q Consensus 117 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~ 196 (502)
+++.++++++++++.++++|+++|++.+...+....++.|++|+|+|++++++...+..+|.++++.+.+.+.+.
T Consensus 94 ~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~----- 168 (426)
T PRK12307 94 SVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEA----- 168 (426)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHccc-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999999888876
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHhccCCc-cccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHH
Q 010744 197 PGWRCAFILMATLSVLIAFLVLVFVVDPR-KKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIV 275 (502)
Q Consensus 197 ~~wr~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (502)
.+||+.|++..+..++...+ ....|+++ +..++. +++ .++.+..+++.....+++++++.++...
T Consensus 169 ~~w~~~f~i~~~~~~~~~~~-~~~~p~~~~~~~~~~-~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (426)
T PRK12307 169 YGWRAAFFVGLLPVLLVIYI-RARAPESKEWEEAKL-SGK------------GKHSQSAWSVFSLSMKGLFNRAQFPLTL 234 (426)
T ss_pred CCHHHHHHHHHHHHHHHHHH-HHHCCCChHHHHhhh-hcc------------ccccccchhhhhHHHHHHHhhchHHHHH
Confidence 89999998855433322211 11122221 111000 000 0000111122223445667777665443
Q ss_pred HHHHhhhhh----hhhHHHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhh
Q 010744 276 LQGIVGSLP----WTAMVFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGI 351 (502)
Q Consensus 276 ~~~~~~~~~----~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~ 351 (502)
......... +....++|.|+++.|+++.+.+...+...++.++++++.+++.||++||+.. ..+.+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-------~~~~~~~~ 307 (426)
T PRK12307 235 CVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTF-------SIGLLMSF 307 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH-------HHHHHHHH
Confidence 332222221 2234678999988999999999999999999999999999999999988631 12222211
Q ss_pred hHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHH
Q 010744 352 PFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEK 431 (502)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~ 431 (502)
... ....... ... ........+..++......+ ....++.|.+|++.||++.|+.+.+.++++.++|.+.|++.+.
T Consensus 308 ~~~-~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~ 383 (426)
T PRK12307 308 LFI-FPLFRIP-QDN-YLLLGACLFGLMATNVGVGG-LVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGIT 383 (426)
T ss_pred HHH-HHHHHHc-ccc-HHHHHHHHHHHHHhcccHhH-HHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHc
Confidence 111 1111111 111 12121222222222212222 3556778999999999999999999999999999999999988
Q ss_pred h
Q 010744 432 M 432 (502)
Q Consensus 432 ~ 432 (502)
.
T Consensus 384 ~ 384 (426)
T PRK12307 384 M 384 (426)
T ss_pred c
Confidence 5
No 11
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=9.6e-37 Score=299.70 Aligned_cols=364 Identities=14% Similarity=0.113 Sum_probs=247.7
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcC---CCCCCchHHHH---HHHHHHhhhcchhhhhhhhcCCchhHH
Q 010744 37 LGISLSLILINLAAIMERADENLLPSVYKEVSEAFN---AGPSDLGYLTF---IRNFVQGLSSPLAGVLVINYDRPAVLT 110 (502)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~s~~~~g~~~s---~~~~~~~~~~~~~G~l~dr~Grr~~l~ 110 (502)
++++..+...+++.+++++|...++...|.+.+|++ .+..+.+...+ ...++..++++++|+++||+|||+++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~ 97 (432)
T PRK10406 18 RRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSML 97 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 455566777788999999999999999999999985 34444444444 444555599999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhHHH--------HHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHH
Q 010744 111 IGILCWAFSTAAVGASQHFL--------HVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGG 182 (502)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~ 182 (502)
.+.++++++++++++++++. .+++.|+++|++.|+..+...+++.|++|+++|+++.++.+.+...|.++++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~ 177 (432)
T PRK10406 98 ISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLAL 177 (432)
T ss_pred HHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988864 5889999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHhhhcc---cCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhH
Q 010744 183 VLATIMAGHQF---WGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESW 259 (502)
Q Consensus 183 ~~~~~l~~~~~---~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (502)
.+...+..... ....|||++|++.+++.++...+....+|+++++. + ..+ +.
T Consensus 178 ~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~-~---------------~~~--~~------- 232 (432)
T PRK10406 178 LVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQET-R---------------ALK--EA------- 232 (432)
T ss_pred HHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHH-h---------------hhc--cc-------
Confidence 77665542100 01279999999988777655433222222221100 0 000 00
Q ss_pred HHHhhhcchhHHHHHHHHHHh--hhhhhhhHHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCC
Q 010744 260 MATKAVIKVPTFQIIVLQGIV--GSLPWTAMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPH 336 (502)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~ 336 (502)
.+.+++++++..+.......+ ....+...+|+|.|+++ +|++..+.+...+...+...++.++.|+++||++||+..
T Consensus 233 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~ 312 (432)
T PRK10406 233 GSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSM 312 (432)
T ss_pred ccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH
Confidence 123345566666555443332 22334455889999976 899998888888888888888888999999999998731
Q ss_pred cchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhh
Q 010744 337 SGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGS 416 (502)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~ 416 (502)
...+... ...............+... ....+.+..+..+...+ ....+.+|.+|++.|+++.|+.+.+++.
T Consensus 313 ------~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~e~fp~~~r~t~~g~~~~~g~~ 383 (432)
T PRK10406 313 ------LCFGSLA-ALFTVPILSALQNVSSPYA-AFGLVMCALLIVSFYTS-ISGILKAEMFPAQVRALGVGLSYAVANA 383 (432)
T ss_pred ------HHHHHHH-HHHHHHHHHHHHcCCcHHH-HHHHHHHHHHHHHHHHH-HHHHHHHHHCCCCccchhhhHHHHHHHH
Confidence 1111111 1111111111111112121 11222222222222223 3567789999999999999999988775
Q ss_pred h-hhhhHHHHHHHHHHhcCC
Q 010744 417 F-SSFAAPLVGILSEKMFGY 435 (502)
Q Consensus 417 ~-~~~~~~~~g~l~~~~~~~ 435 (502)
. +...|.+.+.+ +..+.+
T Consensus 384 ~~g~~~p~~~~~l-~~~g~~ 402 (432)
T PRK10406 384 LFGGSAEYVALSL-KSIGME 402 (432)
T ss_pred HHHhHHHHHHHHH-HHhCCC
Confidence 3 44677777754 554444
No 12
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=1.2e-36 Score=300.63 Aligned_cols=380 Identities=13% Similarity=0.087 Sum_probs=264.6
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHH
Q 010744 37 LGISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCW 116 (502)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 116 (502)
+++|.++..+++.......++..++...|.+.++ |+++.+.+++.+.+.+++++++++.|+++||+|||++++.+.++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~ 103 (452)
T PRK11273 25 RLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILA 103 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHH
Confidence 4556666666677777777777788889999988 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh----HHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhh-HHHHHHHHHhhh
Q 010744 117 AFSTAAVGASQ----HFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGI-GGGVLATIMAGH 191 (502)
Q Consensus 117 ~~~~~~~~~~~----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-~g~~~~~~l~~~ 191 (502)
+++.+++++++ +++.+++.|++.|++.+...+.....+.|++|+++|++++++++.+..+|.. .+++++..+...
T Consensus 104 ~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 183 (452)
T PRK11273 104 AAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF 183 (452)
T ss_pred HHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh
Confidence 99999888764 7888999999999999998888888999999999999999999999999874 455544444333
Q ss_pred cccCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHH
Q 010744 192 QFWGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTF 271 (502)
Q Consensus 192 ~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (502)
.+||+.|++.+++.++..++.+++.+|+++.....++++.+.+..+.. .+.+.++.+.++.. .+.++|++.+
T Consensus 184 -----~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~ 255 (452)
T PRK11273 184 -----NDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDY-NEKHEQELTAKQIF--MQYVLPNKLL 255 (452)
T ss_pred -----ccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhhcccccc-ccccCCCccHHHHH--HHHHHcChHH
Confidence 599999999998888877766666555433211111111000000000 00000111112211 1246778888
Q ss_pred HHHHHHHHhhhhh-hhhHHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhh
Q 010744 272 QIIVLQGIVGSLP-WTAMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFM 349 (502)
Q Consensus 272 ~~~~~~~~~~~~~-~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 349 (502)
|...+..++.... +....|+|.|+++ .|++..+++....+..++.+++.++.|+++||+++++.. ........+.
T Consensus 256 ~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~---~~~~~~~~l~ 332 (452)
T PRK11273 256 WYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRG---ATGVFFMTLV 332 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcc---hHHHHHHHHH
Confidence 8776666555444 4445899999987 799999999988888999999999999999999543211 0111111111
Q ss_pred hhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhh-hHHHHHHH
Q 010744 350 GIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSF-AAPLVGIL 428 (502)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~-~~~~~g~l 428 (502)
.+....+. .....+ ........+..|........ ....+..|.+|++.||+++|+.+...++++.+ +|.+.|.+
T Consensus 333 --~~~~~~~~-~~~~~~-~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l 407 (452)
T PRK11273 333 --TIATIVYW-LNPAGN-PTVDMACMIVIGFLIYGPVM-LIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYT 407 (452)
T ss_pred --HHHHHHHH-HhcccC-hHHHHHHHHHHHHHHHhHHH-HHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHH
Confidence 11111111 111112 22222334444543322222 23345678999999999999999999998775 79999999
Q ss_pred HHHhc
Q 010744 429 SEKMF 433 (502)
Q Consensus 429 ~~~~~ 433 (502)
.|..+
T Consensus 408 ~~~~g 412 (452)
T PRK11273 408 VDFFG 412 (452)
T ss_pred HHHhc
Confidence 99863
No 13
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=2e-37 Score=314.01 Aligned_cols=383 Identities=16% Similarity=0.112 Sum_probs=275.2
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHH
Q 010744 36 VLGISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILC 115 (502)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 115 (502)
.++.|.++.+++++.+..+++...++.++|.+.++++++..+.+++.+++.++.+++++++|+++||+|||+++++++++
T Consensus 162 ~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil 241 (742)
T TIGR01299 162 GRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSV 241 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 45677888888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcc--
Q 010744 116 WAFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQF-- 193 (502)
Q Consensus 116 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~-- 193 (502)
.+++.++++++++++.++++|+++|++.++..+...+++.|++|+++|++.+++...+..+|.++++.++..+....+
T Consensus 242 ~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~ 321 (742)
T TIGR01299 242 NGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWS 321 (742)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 999999999999999999999999999999999999999999999999999999999999999999998877764311
Q ss_pred ------cCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhh--------------------Hhhhc
Q 010744 194 ------WGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDE--------------------LVEKG 247 (502)
Q Consensus 194 ------~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~ 247 (502)
....+||+.+++.++++++..++.+++||+|++...+++.++.....++ .....
T Consensus 322 ~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~ 401 (742)
T TIGR01299 322 FQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIH 401 (742)
T ss_pred hccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhh
Confidence 1124799999998888777777777778888875444321111000000 00000
Q ss_pred C-------CCcchh------------HHHhHHHHhhhcchhH----HHHHHHHHHhhhhhhhhHHHHHHHHHHh------
Q 010744 248 N-------TSVSSV------------WLESWMATKAVIKVPT----FQIIVLQGIVGSLPWTAMVFFTMWFELI------ 298 (502)
Q Consensus 248 ~-------~~~~~~------------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 298 (502)
. ...... ....+..++++++.+. +...++.+......++...|+|.++++.
T Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~ 481 (742)
T TIGR01299 402 QEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYA 481 (742)
T ss_pred hhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000000 0011123344444432 3333333333344455568999875331
Q ss_pred ------------------------------------CCC-----------------------------------------
Q 010744 299 ------------------------------------GFD----------------------------------------- 301 (502)
Q Consensus 299 ------------------------------------g~s----------------------------------------- 301 (502)
|+.
T Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 561 (742)
T TIGR01299 482 ALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDF 561 (742)
T ss_pred hhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccch
Confidence 000
Q ss_pred --------------------------------hhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhh
Q 010744 302 --------------------------------HSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFM 349 (502)
Q Consensus 302 --------------------------------~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 349 (502)
.........+..++.+++.++.|+++||+|||+.+ ..+.++
T Consensus 562 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l-------~~~~~l 634 (742)
T TIGR01299 562 EEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRML-------AGSMVL 634 (742)
T ss_pred hhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH-------HHHHHH
Confidence 00123335566788899999999999999999742 222222
Q ss_pred hhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHH
Q 010744 350 GIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILS 429 (502)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~ 429 (502)
..+...+.. ...+... +++..++.+++.+...+ ....+++|++|++.|++++|+.+....+|+.++|++.|.+.
T Consensus 635 sai~~ll~~----~~~s~~~-ll~~~~l~g~~~~~~~~-~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~ 708 (742)
T TIGR01299 635 SCISCFFLS----FGNSESA-MIALLCLFGGLSIAAWN-ALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFV 708 (742)
T ss_pred HHHHHHHHH----HHccHHH-HHHHHHHHHHHHHHHHH-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222111111 1112222 33344455666555555 67889999999999999999999999999999999999888
Q ss_pred HH
Q 010744 430 EK 431 (502)
Q Consensus 430 ~~ 431 (502)
+.
T Consensus 709 ~~ 710 (742)
T TIGR01299 709 GI 710 (742)
T ss_pred Hh
Confidence 75
No 14
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=1.6e-36 Score=302.52 Aligned_cols=372 Identities=14% Similarity=0.148 Sum_probs=255.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCC-chHH-----HHHHHHHHhhhcchhhhhhhhcCCchhHHHHH
Q 010744 40 SLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSD-LGYL-----TFIRNFVQGLSSPLAGVLVINYDRPAVLTIGI 113 (502)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~-~g~~-----~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 113 (502)
+..+...+++.+++++|...++...|.+.++++.+.++ .+++ .++..+++.+++++.|+++||+|||+++.+++
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 45667778899999999999999999999999765433 2332 47778999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHH--------HHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHH
Q 010744 114 LCWAFSTAAVGASQHFLH--------VGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLA 185 (502)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~--------l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~ 185 (502)
++++++++++++++|+++ ++++|+++|++.|+..+...+++.|++|+++|+++.++.+.+..+|..+|+.+.
T Consensus 95 ~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~ 174 (490)
T PRK10642 95 VIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVV 174 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999875 889999999999999999999999999999999999999999999998888776
Q ss_pred HHHhhhcc---cCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHH
Q 010744 186 TIMAGHQF---WGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMAT 262 (502)
Q Consensus 186 ~~l~~~~~---~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (502)
..+..... ....|||++|++.+++.++..++....+|+|++...+++.++.+. +. ..+.++.++++
T Consensus 175 ~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~--~~----~~~~~~~~~~~----- 243 (490)
T PRK10642 175 VLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDR--EG----LQDGPKVSFKE----- 243 (490)
T ss_pred HHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhcc--cc----ccccccCCHHH-----
Confidence 65543100 113799999999876665544443444444443221110000000 00 00001111222
Q ss_pred hhhcch--hHHHHHHHHHHh-hhhhhhhHHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcc
Q 010744 263 KAVIKV--PTFQIIVLQGIV-GSLPWTAMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSG 338 (502)
Q Consensus 263 ~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~ 338 (502)
++++ +.+.......+. ....+....|+|.|+++ +|++..+.++......++.+++.++.|+++||+|||+..
T Consensus 244 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~-- 319 (490)
T PRK10642 244 --IATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFV-- 319 (490)
T ss_pred --HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH--
Confidence 2221 122222222222 22334455789999976 899988888887788888999999999999999999732
Q ss_pred hhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhh
Q 010744 339 RVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFS 418 (502)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~ 418 (502)
..+.+.........+.... .. ....+.+..++.|++.+.... ....+..|.+|++.|+++.|+.+.+...++
T Consensus 320 -----~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~g~~~~~~~g-~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g 391 (490)
T PRK10642 320 -----ILGSVALFVLAIPAFILIN-SN-VIGLIFAGLLMLAVILNCFTG-VMASTLPAMFPTHIRYSALAAAFNISVLVA 391 (490)
T ss_pred -----HHHHHHHHHHHHHHHHHHh-CC-CHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCccchHHHHHHHHHHHHHH
Confidence 1111111111111111111 11 123333444555555444433 456777889999999999998777788888
Q ss_pred hhhHHHHHHHHHHhcC
Q 010744 419 SFAAPLVGILSEKMFG 434 (502)
Q Consensus 419 ~~~~~~~g~l~~~~~~ 434 (502)
.++|.+.|++.+..++
T Consensus 392 ~~~p~i~g~l~~~~~~ 407 (490)
T PRK10642 392 GLTPTLAAWLVESTQN 407 (490)
T ss_pred HHHHHHHHHHHHHhCC
Confidence 9999999999987543
No 15
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=3.1e-37 Score=304.18 Aligned_cols=382 Identities=15% Similarity=0.107 Sum_probs=278.5
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHH
Q 010744 37 LGISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCW 116 (502)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 116 (502)
.++|.++..+.+.......+...++...|.+.+++|.+.++.+++.+.+.++..++.++.|+++||+|||++++.+.++.
T Consensus 15 ~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 94 (455)
T TIGR00892 15 GWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLA 94 (455)
T ss_pred CcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHH
Confidence 56788888777777766667677888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHH-HHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccC
Q 010744 117 AFSTAAVGASQHFLHVGM-WRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWG 195 (502)
Q Consensus 117 ~~~~~~~~~~~~~~~l~~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~ 195 (502)
+++.++++++++++.+++ .|+++|++.+...+...+++.++++ ++|+++.++...+..+|..++|++++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~---- 169 (455)
T TIGR00892 95 SLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFES---- 169 (455)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHH----
Confidence 999999999999998865 5799999998877778888999994 8999999999999999999999999999887
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHH-HhhhcchhHHHHH
Q 010744 196 VPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMA-TKAVIKVPTFQII 274 (502)
Q Consensus 196 ~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 274 (502)
.|||++|++.+++.++..+..++..++++.......++++..+..... ++.. .....++..+. ..+++++|.++..
T Consensus 170 -~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (455)
T TIGR00892 170 -FGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGST-KKLS-KKSTAEKINRFLDFSLFTHRGFLVY 246 (455)
T ss_pred -hChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCcc-cccc-ccchhhhhhhhcchHHhcCchHHHH
Confidence 899999999998887666555554443221111000000000000000 0000 00000111110 1146788888877
Q ss_pred HHHHHhhhhhh-hhHHHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhH
Q 010744 275 VLQGIVGSLPW-TAMVFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPF 353 (502)
Q Consensus 275 ~~~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 353 (502)
....++....+ ....++|.|+++.|++..+++.+.++.+++.++++++.+++.||...++.. ......+..+..
T Consensus 247 ~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~---~~~~~~~~~~~~-- 321 (455)
T TIGR00892 247 LSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHV---QYLFSFALLFNG-- 321 (455)
T ss_pred HHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHH---HHHHHHHHHHHH--
Confidence 76655544443 334788999988999999999999999999999999999999974322110 111111111111
Q ss_pred HHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhc
Q 010744 354 SWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMF 433 (502)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~ 433 (502)
+........++ .+.+.+..++.|++.+...+ ...+++.|.+|+++++++.|+.+...++++.++|.+.|.+.|..+
T Consensus 322 --l~~ll~~~~~~-~~~~~i~~~~~G~~~g~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g 397 (455)
T TIGR00892 322 --LTHLLCALAGD-YTGLVIYCIFFGLSFGSVGA-LLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATK 397 (455)
T ss_pred --HHHHHHHHhch-HHHHHHHHHHHHHHhchHHH-HHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcC
Confidence 11111111222 33455667778888777666 577888899999999999999999999999999999999999876
Q ss_pred CC
Q 010744 434 GY 435 (502)
Q Consensus 434 ~~ 435 (502)
+|
T Consensus 398 ~~ 399 (455)
T TIGR00892 398 NY 399 (455)
T ss_pred Cc
Confidence 55
No 16
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=5.8e-37 Score=300.17 Aligned_cols=382 Identities=16% Similarity=0.175 Sum_probs=274.6
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHH
Q 010744 36 VLGISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILC 115 (502)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 115 (502)
++++|+.+..++++++.+.++....+++.|.+.+++|.++.+.+++.+++.++..+++++.|+++||+|||+++..+.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~ 86 (405)
T TIGR00891 7 TRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVL 86 (405)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 36788888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccC
Q 010744 116 WAFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWG 195 (502)
Q Consensus 116 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~ 195 (502)
.+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++++.+++.+.+.
T Consensus 87 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~---- 162 (405)
T TIGR00891 87 FSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPV---- 162 (405)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred ccc--chHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcch--hHH
Q 010744 196 VPG--WRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKV--PTF 271 (502)
Q Consensus 196 ~~~--wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 271 (502)
.+ ||+.|++.++..++..+.....+|++++..+++++++.+.+.++... +....+...++.....++..+. +.+
T Consensus 163 -~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (405)
T TIGR00891 163 -WGDGWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYG-GEHRIANIVMTLAAAMVQSAGKRWPTF 240 (405)
T ss_pred -cCccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhc-cchhhhhhhhhhhHHhhhhhhhhhHHH
Confidence 44 99999987665555444333343333222111111100000000000 0000000111111111111111 111
Q ss_pred HHHHHHHHh-hhhhhhhHHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhh
Q 010744 272 QIIVLQGIV-GSLPWTAMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFM 349 (502)
Q Consensus 272 ~~~~~~~~~-~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 349 (502)
......... .........++|.|+++ +|++..+.+.+.+...++.+++.++.+++.||+++|+... .+..+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~-------~~~~~ 313 (405)
T TIGR00891 241 VYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYV-------CSLLA 313 (405)
T ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhH-------HHHHH
Confidence 112222222 22223333678888875 8999999999999999999999999999999999987421 11111
Q ss_pred hhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHH
Q 010744 350 GIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILS 429 (502)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~ 429 (502)
+.... ...... ..+ .+...+..++.++..+...+ ....++.|.+|+++|++++|+.+.+.++++.++|.+.|.+.
T Consensus 314 ~~~~~-~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~ 388 (405)
T TIGR00891 314 GQLLI-IPVFAI--GAN-VAVLGLGLFFQQMLVQGIWG-ILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLA 388 (405)
T ss_pred HHHHH-HHHHHh--CCc-hHHHHHHHHHHHHHHccchh-hHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 11111 111111 122 23333443455555444444 56778899999999999999999999999999999999999
Q ss_pred HHhcCC
Q 010744 430 EKMFGY 435 (502)
Q Consensus 430 ~~~~~~ 435 (502)
|+.+.|
T Consensus 389 ~~~g~~ 394 (405)
T TIGR00891 389 QRLDEY 394 (405)
T ss_pred Hhcccc
Confidence 997655
No 17
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=7.5e-37 Score=296.42 Aligned_cols=351 Identities=14% Similarity=0.086 Sum_probs=259.5
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHH
Q 010744 38 GISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWA 117 (502)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 117 (502)
..|.....++++.+..... ...++++|.+++|+|+|.++.+++.+.+.+++.+++++.|+++||+|||+++..+..+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~-~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~ 85 (393)
T PRK09705 7 LNFMLLVLVLIGLNMRPLL-TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIA 85 (393)
T ss_pred hHHHHHHHHHHHHHcchhh-hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHH
Confidence 3455555555555544333 677899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcc
Q 010744 118 FSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVP 197 (502)
Q Consensus 118 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~ 197 (502)
++.+++++++|++.++++|+++|++.+...+....++.+++| ++|+++++++..+..+|..+|+.+++++.++ ..
T Consensus 86 ~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~----~~ 160 (393)
T PRK09705 86 VGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQH----SE 160 (393)
T ss_pred HHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHh----cC
Confidence 999999999999999999999999999999999999999996 8899999999999999999999999998875 13
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHH
Q 010744 198 GWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQ 277 (502)
Q Consensus 198 ~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (502)
+||+.+.+.++..++..+..+...++.+..++++ +. ..++.++++..+...+.
T Consensus 161 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~-------~~~~~l~~~~~~~l~~~ 213 (393)
T PRK09705 161 TWYQTLAWWALPAVVALFAWWWQSAREVASSHKT--------------------TT-------TPVRVVFTPRAWTLGVY 213 (393)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCC--------------------Cc-------CCcccccCHhHHHHHHH
Confidence 8999988776665444333322222211100000 00 01123445555555544
Q ss_pred HHhhhhhh-hhHHHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHH
Q 010744 278 GIVGSLPW-TAMVFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWF 356 (502)
Q Consensus 278 ~~~~~~~~-~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (502)
.++....+ ...+|+|.+++++|.+..+++...++..++.++++++.+++.||+++|+.. ..+..+..... .
T Consensus 214 ~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~-------~~~~~l~~~~~-~ 285 (393)
T PRK09705 214 FGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLL-------MLALVLQLVGF-C 285 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHH-------HHHHHHHHHHH-H
Confidence 44444333 444789999988999999999999999999999999999999999988632 11221111111 1
Q ss_pred HhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhccc-CCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcCC
Q 010744 357 LLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVV-PAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFGY 435 (502)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~ 435 (502)
.+...+. +... . ..++.|++.+...+ .......+.. |++.+++..|+.+...++++.++|.+.|++.|..++|
T Consensus 286 ~~~~~~~--~~~~-~--~~~l~g~g~g~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~ 359 (393)
T PRK09705 286 GFIWLPL--QLPV-L--WAMVCGLGLGGAFP-LCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNY 359 (393)
T ss_pred HHHHccc--hHHH-H--HHHHHHHhccchHH-HHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 1111121 1111 1 22345666665555 3444445555 4578999999999999999999999999999998766
No 18
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=4.9e-36 Score=297.11 Aligned_cols=365 Identities=15% Similarity=0.090 Sum_probs=254.8
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHH
Q 010744 38 GISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWA 117 (502)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 117 (502)
++++.+...+...++...+.....+..|.+.+|+|++..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~ 112 (476)
T PLN00028 33 PHMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTA 112 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 34555666666777777777778889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhc----c
Q 010744 118 FSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQ----F 193 (502)
Q Consensus 118 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~----~ 193 (502)
++.++++++++++.+++.|+++|++.+... ....++.|++|+++|++++++......+|..+++.+.+.+.... .
T Consensus 113 ~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~ 191 (476)
T PLN00028 113 PAVFCMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGA 191 (476)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999987654 45678899999999999999998888888877776665543210 0
Q ss_pred cCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHH
Q 010744 194 WGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQI 273 (502)
Q Consensus 194 ~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (502)
.+..|||+.|++.+++.++..++.++++++++....++ ..+ +...++.+ ..+..++.++++.+|.
T Consensus 192 ~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~~-----------~~~-~~~~~~~~---~~~~~~~~~~~~~~~~ 256 (476)
T PLN00028 192 PSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNYRE-----------LKK-SGTMPKDS---FSKVLRYGVTNYRTWI 256 (476)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCchhh-----------HHh-cCcccccc---HHHHHHHHHcCchhHH
Confidence 11258999999999998888777777766543211000 000 00000111 1123445667777766
Q ss_pred HHHHHHhhhhh-hhhHHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhh
Q 010744 274 IVLQGIVGSLP-WTAMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGI 351 (502)
Q Consensus 274 ~~~~~~~~~~~-~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~ 351 (502)
..+..+..... +...+++|.|+.+ +|++..+++.+.+...++++++++++|+++||++||+....+.........+..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~ 336 (476)
T PLN00028 257 LALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGG 336 (476)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHH
Confidence 65554443332 3344788998876 799999999999999999999999999999999987543333333322222211
Q ss_pred hHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHH
Q 010744 352 PFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLV 425 (502)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~ 425 (502)
.. ........+ .......+++++++.+.... ....+..+..| +.+|++.|+.+..+++|+.++|.+.
T Consensus 337 i~----~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~ 403 (476)
T PLN00028 337 VF----CIWLGRANS-LGAAIVVMILFSIFVQAACG-ATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLF 403 (476)
T ss_pred HH----HHHhcccch-HHHHHHHHHHHHHHHHHhhh-hhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHH
Confidence 11 111122222 22233344455555444444 45566667544 7899999998666655555555443
No 19
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=3.4e-37 Score=300.94 Aligned_cols=373 Identities=16% Similarity=0.188 Sum_probs=278.5
Q ss_pred HHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHH
Q 010744 50 AIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHF 129 (502)
Q Consensus 50 ~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 129 (502)
+++...+...++...|.+.+++|.+..+.+++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++++++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~ 82 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAY 82 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCH
Confidence 45667888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHH
Q 010744 130 LHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATL 209 (502)
Q Consensus 130 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~ 209 (502)
+.++++|+++|++.+...+....++.|++|+++|++++++.+....+|.++++.+++.+.+. .+||+.|++.+++
T Consensus 83 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----~~~~~~~~~~~~~ 157 (399)
T TIGR00893 83 VSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIH-----FSWQWAFIIEGVL 157 (399)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHh-----CCchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998887 8999999999988
Q ss_pred HHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhhhhH-
Q 010744 210 SVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLPWTAM- 288 (502)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 288 (502)
.++..++.++..+++++..+..++++++...++...+.+ .+...++.....++.+++|.++...+..+.........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (399)
T TIGR00893 158 GIIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQ--GKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFL 235 (399)
T ss_pred HHHHHHHhhheecCCCCccccCCHHHHhhcchhhccccc--cccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHH
Confidence 888777776666654432222111111111110000000 00000111233456777888887777666665555544
Q ss_pred HHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcch
Q 010744 289 VFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSN 367 (502)
Q Consensus 289 ~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (502)
.+.|.|+++ +|.++.+.+.+.+...++.+++.++.+++.||+++|+... .........+.....+........+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~- 311 (399)
T TIGR00893 236 TWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSL---VFARKTAIIAGLVLSLLMFATNYVNI- 311 (399)
T ss_pred HHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccch---hHHHHHHHHHHHHHHHHHHHhccchh-
Confidence 788999876 8999999999999999999999999999999999986321 11100111111111111111111112
Q ss_pred hHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcCC
Q 010744 368 YYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFGY 435 (502)
Q Consensus 368 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~ 435 (502)
.........+.+++.+ ..+ ...++..|..|+++|+++.|+.+.+.++++.++|.+.|.+.|..+++
T Consensus 312 ~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~ 377 (399)
T TIGR00893 312 PYAALALVALGFFGLG-AGA-IGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSF 377 (399)
T ss_pred HHHHHHHHHHHHhchh-hhh-HHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCch
Confidence 2222222222233333 344 67889999999999999999999999999999999999999986434
No 20
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=9.4e-37 Score=290.89 Aligned_cols=338 Identities=14% Similarity=0.040 Sum_probs=245.4
Q ss_pred HHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHH
Q 010744 53 ERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHV 132 (502)
Q Consensus 53 ~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l 132 (502)
+......+++.+|.+.+|+|+|+++.|++.+.+.+++.+++++.|+++||+|||+++..+.+....+.......+|++++
T Consensus 3 ~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWL 82 (368)
T ss_pred hhHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 34455678899999999999999999999999999999999999999999999988776665555544433334799999
Q ss_pred HHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHH
Q 010744 133 GMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVL 212 (502)
Q Consensus 133 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~ 212 (502)
++.|+++|++.+. .+.....++|++|+|+|++++++.+.+..+|.+++++++.++.+. .|||+.|++.++++++
T Consensus 83 ~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~-----~gWr~~f~~~~~l~~~ 156 (368)
T TIGR00903 83 LACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTA-----GGLQLLIIPIAAVAAA 156 (368)
T ss_pred HHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cchHHHHHHHHHHHHH
Confidence 9999999999986 456666779999999999999999999999999999999999887 8999999999988888
Q ss_pred HHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhh-hhhHHHH
Q 010744 213 IAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLP-WTAMVFF 291 (502)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 291 (502)
..++.++..||+++.+++. ... ++..++.++++++|.+|...+..++.... ++..+|+
T Consensus 157 ~~~~~~~~lp~~p~~~~~~------~~~---------------~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wl 215 (368)
T TIGR00903 157 GIILVLAALPALPFQAAEG------FGF---------------KDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWL 215 (368)
T ss_pred HHHHHHHHcCCCCCCCCCC------cch---------------HHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777776666543221110 000 01112456788889988887777776554 4445899
Q ss_pred HHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHH
Q 010744 292 TMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTY 371 (502)
Q Consensus 292 ~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (502)
|.|+++.|++.. .+.......+.+.++ .+++.||..||+.. .........+.. .. ..... ...+... .
T Consensus 216 p~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r---~~~~~~~~~~~a-~~-~~~~~--~~~~~~~-~ 283 (368)
T TIGR00903 216 EAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLR---SIYIRAAALLIA-AF-FLALA--FELNRLA-L 283 (368)
T ss_pred HHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhH---HHHHHHHHHHHH-HH-HHHHH--HccccHH-H
Confidence 999988888864 566655555555544 47888888765321 111111111111 11 11111 1111122 2
Q ss_pred HHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHH
Q 010744 372 AVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSE 430 (502)
Q Consensus 372 ~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~ 430 (502)
.....+.+++.....+ ..+++.+|.+|++.|+++.|+.+..+++++..+|.+.+.+..
T Consensus 284 ~~~~~l~~~~~~~~~~-~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~ 341 (368)
T TIGR00903 284 FAFIGIAGLLMLPAYA-IIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS 341 (368)
T ss_pred HHHHHHHHHhhhhhHH-HHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc
Confidence 3344445555555544 467889999999999999999999999999999999988773
No 21
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=3.1e-37 Score=306.63 Aligned_cols=382 Identities=14% Similarity=0.077 Sum_probs=279.3
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhhchhhHHHHHh----------------------hcCCCCCCchHHHHHHHHHHhhhc
Q 010744 36 VLGISLSLILINLAAIMERADENLLPSVYKEVSE----------------------AFNAGPSDLGYLTFIRNFVQGLSS 93 (502)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~----------------------~~~~s~~~~g~~~s~~~~~~~~~~ 93 (502)
.+.|+.+..+++++..+++.|+...+...+.+.+ |++++..+.|++.+.+.+++.+++
T Consensus 14 ~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~ 93 (465)
T TIGR00894 14 CSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIIIQ 93 (465)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHHH
Confidence 4668888899999999999999999988888876 789999999999999999999999
Q ss_pred chhhhhhhhcCCchhHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHH
Q 010744 94 PLAGVLVINYDRPAVLTIGILCWAFSTAAVGAS--QHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLS 171 (502)
Q Consensus 94 ~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~ 171 (502)
++.|+++||+|||+++..+.++++++.+++.++ .+++.+++.|+++|++.+...+....++.||+|+++|++++++..
T Consensus 94 ~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 173 (465)
T TIGR00894 94 IPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMST 173 (465)
T ss_pred cchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 999999999999999999999999999887654 568889999999999999999999999999999999999999999
Q ss_pred HHHhhhhhHHHHHHHHHhhhcccCcc-cchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCC
Q 010744 172 LVGTMGGIGGGVLATIMAGHQFWGVP-GWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTS 250 (502)
Q Consensus 172 ~~~~~G~~~g~~~~~~l~~~~~~~~~-~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (502)
.+..+|.++++++++.+.+. . +||+.|++.++++++..++.+.+++|.++.+++.+++|++...+ . .+++.
T Consensus 174 ~~~~~g~~i~~~l~~~l~~~-----~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~~--~-~~~~~ 245 (465)
T TIGR00894 174 SGFQLGTFIFLPISGWLCES-----WGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKYINS--S-LQGQK 245 (465)
T ss_pred HHHHHHHHHHHHHHHHHHhc-----cCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHh--h-ccccc
Confidence 99999999999999998875 4 99999999999888887777777665443222111111110000 0 00000
Q ss_pred cchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhhhh-HHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhh
Q 010744 251 VSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLPWTA-MVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVAD 328 (502)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d 328 (502)
.+.+. ...++++++++.++...+..+.....+.. .+|+|.|+++ +|++..+.++..++..++.+++.++.|++.|
T Consensus 246 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d 322 (465)
T TIGR00894 246 GSTRQ---SLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLAD 322 (465)
T ss_pred CCCCC---CCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001 12345678888888887777666555444 4899999987 8999999999999999999999999999999
Q ss_pred hhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHH
Q 010744 329 RISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYA 408 (502)
Q Consensus 329 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g 408 (502)
|+++|+.......................+........ .......+.+.+.+.+...+ .......|..| +.+|.+.|
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~-~~~g~~~g 399 (465)
T TIGR00894 323 FLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAA-FYLTIIILTLANAVSSGPLA-GVLINSLDLAP-RFLGFIKG 399 (465)
T ss_pred HHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCc-hHHHHHHHHHHHHHhhhhhh-hhhhchhhcCh-hHHHHHHH
Confidence 98876543211110001011111011111111111112 22222333344444443333 34455567666 58999999
Q ss_pred HHHHhhhhhhhhhHHHHHHHHHH
Q 010744 409 FDRAFEGSFSSFAAPLVGILSEK 431 (502)
Q Consensus 409 ~~~~~~~~~~~~~~~~~g~l~~~ 431 (502)
+.+..+++++.++|.+.|.+.+.
T Consensus 400 ~~~~~~~l~~~i~p~l~g~~~~~ 422 (465)
T TIGR00894 400 ITGLPGFIGGLIASTLAGNILSQ 422 (465)
T ss_pred HHHHHHHHHHHHHHHhhheeeCC
Confidence 99999999999999999988765
No 22
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=2.8e-36 Score=292.38 Aligned_cols=344 Identities=13% Similarity=0.111 Sum_probs=263.3
Q ss_pred HHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHH
Q 010744 52 MERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLH 131 (502)
Q Consensus 52 ~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 131 (502)
+........++..|.+.+|+|++.++.+++.+++.+++.++++++|+++||+|||+++..+.++.+++.+++++++|++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (377)
T TIGR00890 14 FTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAA 93 (377)
T ss_pred HHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHH
Confidence 33334567889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHH
Q 010744 132 VGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSV 211 (502)
Q Consensus 132 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~ 211 (502)
++++|++.|++.+...+.....+.+++| |+|+++.++...+..+|..+++++.+.+.+. .+||+.|++.+++.+
T Consensus 94 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~f~~~~~~~~ 167 (377)
T TIGR00890 94 LYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINL-----EGVPAAFIYMGIIFL 167 (377)
T ss_pred HHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhc-----ccHHHHHHHHHHHHH
Confidence 9999999999999988888889999995 6899999999999999998877777777665 799999999999988
Q ss_pred HHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhhh-hHHH
Q 010744 212 LIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLPWT-AMVF 290 (502)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 290 (502)
+..+..+++.++|+++..+++++. + +.....++.++++.++......+....... ...+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~----------------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (377)
T TIGR00890 168 LVIVLGAFLIGYPPGQLIKTNIEV----------------S----VKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGL 227 (377)
T ss_pred HHHHHHHHheecCchhccccCccc----------------c----hhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHH
Confidence 888877777766543221110000 0 001123346677777666555444433332 3356
Q ss_pred HHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHH
Q 010744 291 FTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYT 370 (502)
Q Consensus 291 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (502)
.+.|.+++|.+..+.+...+...++.++++++.|++.||++||+... .+........ +... ...... ...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~-------~~~~~~~~~~-~~~~-~~~~~~-~~~ 297 (377)
T TIGR00890 228 YKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMS-------IVFGISAVGM-AAML-FIPMLN-DVL 297 (377)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-------HHHHHHHHHH-HHHH-Hcccch-hHH
Confidence 67777888999888999999999999999999999999999987421 1111111111 1111 111111 222
Q ss_pred HHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 371 YAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 371 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
......+.+++.+...+ ....+..|.+|+++|+++.|+.+...++++.++|.+.|.+.+..
T Consensus 298 ~~~~~~~~g~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 358 (377)
T TIGR00890 298 FLATVALVFFTWGGTIS-LFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEI 358 (377)
T ss_pred HHHHHHHHHHHhccchh-ccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 22344556666665555 56778899999999999999999999999999999999999874
No 23
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=2.4e-35 Score=282.26 Aligned_cols=361 Identities=13% Similarity=0.079 Sum_probs=268.7
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhchhhHHHHHh-hcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHH
Q 010744 37 LGISLSLILINLAAIMERADENLLPSVYKEVSE-AFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILC 115 (502)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 115 (502)
+-.++.+....++.++........+++.+.+.+ |+|+|++|.+++.+++.+++++..++.|++.||+|.|+++.++.++
T Consensus 30 ~~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll 109 (462)
T PRK15034 30 HIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAI 109 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 345567888888888889999999999999876 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh-----hHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhh
Q 010744 116 WAFSTAAVGAS-----QHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAG 190 (502)
Q Consensus 116 ~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 190 (502)
.++.++..+++ +|++.+++.|++.|++ +..++.....+++|+|+++||+++|+.....++|..+++++...+..
T Consensus 110 ~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~ 188 (462)
T PRK15034 110 LIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIF 188 (462)
T ss_pred HHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999999987 8999999999999998 77889999999999999999999999987777888777666655431
Q ss_pred -----hcc--------cCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHH
Q 010744 191 -----HQF--------WGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLE 257 (502)
Q Consensus 191 -----~~~--------~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (502)
..+ ++..+||.++++..++.++..++.+++.++++.. + .
T Consensus 189 ~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~-~---------------------------~ 240 (462)
T PRK15034 189 VPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASS-R---------------------------A 240 (462)
T ss_pred HHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccc-c---------------------------c
Confidence 100 1134699999999888888887777776554321 1 1
Q ss_pred hHHHHhhhcchhHHHHHHHHHHhhhhhhhhH-HHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCC
Q 010744 258 SWMATKAVIKVPTFQIIVLQGIVGSLPWTAM-VFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPH 336 (502)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~ 336 (502)
..++..+.+|+|..|...+..++.+..+..+ .++|.|+++ +++.........+..+...+.++++|+++||+|+++..
T Consensus 241 ~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl 319 (462)
T PRK15034 241 SIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVT 319 (462)
T ss_pred CHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHH
Confidence 1234455888999998888888877777766 589999876 23333333334445677888999999999999998742
Q ss_pred cchhHHhhhhhhhhhhHHHHHhhhccCC-cchhHHHHHHHHHHHHHHhhhccCCCccchhcccCC---------------
Q 010744 337 SGRVMCAQFSAFMGIPFSWFLLTAIPQS-VSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPA--------------- 400 (502)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~--------------- 400 (502)
..+...........+...+.. ....+.....++...++.+.... ..+-++.+.+|+
T Consensus 320 -------~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gng-svfk~ip~~f~~~~~~~~~~~~~~~~~ 391 (462)
T PRK15034 320 -------LINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSG-STFQMIAVIFRQITIYRVKMKGGSDEQ 391 (462)
T ss_pred -------HHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccch-HHHHhhHHHHhhhhhhcccccccchhH
Confidence 122221222221222222322 12233333333333344444443 455566666663
Q ss_pred ------CchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcCC
Q 010744 401 ------KHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFGY 435 (502)
Q Consensus 401 ------~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~ 435 (502)
++.|.+.|+....+.+|+++-|.+.|...+.++++
T Consensus 392 ~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~ 432 (462)
T PRK15034 392 AQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSP 432 (462)
T ss_pred HhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCc
Confidence 15789999999999999999999999999998776
No 24
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=1.1e-35 Score=287.68 Aligned_cols=349 Identities=15% Similarity=0.161 Sum_probs=255.9
Q ss_pred HHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHH
Q 010744 42 SLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTA 121 (502)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~ 121 (502)
.+..+.+..+..........+.+|.+.+|+|.+.++.|++.+.+.+++.++++++|+++||+|||+++..+.++.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 83 (382)
T PRK10091 4 VILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNA 83 (382)
T ss_pred hHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHH
Confidence 34556667777788888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchH
Q 010744 122 AVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRC 201 (502)
Q Consensus 122 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~ 201 (502)
++++++|++.+++.|+++|++.+...+....++.|++|+++|++++++...+..+|..+++++++++.+. .+||+
T Consensus 84 l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~-----~gwr~ 158 (382)
T PRK10091 84 MFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQE-----FSWRY 158 (382)
T ss_pred HHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhh-----ccHHH
Confidence 9999999999999999999999998898889999999999999999999999999999999999999876 89999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhh
Q 010744 202 AFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVG 281 (502)
Q Consensus 202 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (502)
.|++.+++.++..+..++..|+++++.+.+ .++ . .+.++++..+.......+.
T Consensus 159 ~f~~~~~~~~~~~~~~~~~lp~~~~~~~~~-----------------------~~~---~-~~~~~~~~~~~~~~~~~~~ 211 (382)
T PRK10091 159 TFLLIAVFNIAVLASIYFWVPDIRDEAKGG-----------------------LRE---Q-FHFLRSPAPWLIFAATMFG 211 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcccccC-----------------------HHH---H-HHHhcChHHHHHHHHHHHH
Confidence 999999887777666555555532110000 001 1 1234555555544433333
Q ss_pred hh-hhhhHHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhh
Q 010744 282 SL-PWTAMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLT 359 (502)
Q Consensus 282 ~~-~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (502)
.. .+...++.+.++++ +|+++.+.+++.+...++.++++++.+++.||+++|+.. ..+..+.... .+...
T Consensus 212 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~-------~~~~~~~~i~-~~~~~ 283 (382)
T PRK10091 212 NAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIA-------AVTDFIIVLA-LLMLF 283 (382)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHH-------HHHHHHHHHH-HHHHH
Confidence 22 22333566667765 899999999999999999999999999999999988742 1111111111 11111
Q ss_pred hccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcCC
Q 010744 360 AIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFGY 435 (502)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~ 435 (502)
.. .+.. +......++.+.+.....++.......+..|++.++.+ ..+...++|.++||.+.|.+.|..++|
T Consensus 284 ~~--~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~ 354 (382)
T PRK10091 284 FF--GGMK-TASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAY 354 (382)
T ss_pred HH--HhhH-HHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCc
Confidence 11 1111 22233333444444333332223344454454555544 346778899999999999999986666
No 25
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=4e-35 Score=284.04 Aligned_cols=350 Identities=14% Similarity=0.113 Sum_probs=266.0
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHH
Q 010744 37 LGISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCW 116 (502)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 116 (502)
+..|..+..+.+..+..........+.+|.+.+|+|.++++.++..+++.++..+++++.|++.||+|||+++..+.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~ 95 (394)
T PRK10213 16 RPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLL 95 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHH
Confidence 34566656666666666666556667889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCc
Q 010744 117 AFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGV 196 (502)
Q Consensus 117 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~ 196 (502)
+++.+++++++|++.+++.|+++|++.+...+...+++.|++|+|+|++++++...+.++|.+++|++++.+.+.
T Consensus 96 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~----- 170 (394)
T PRK10213 96 TLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGEL----- 170 (394)
T ss_pred HHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHH
Q 010744 197 PGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVL 276 (502)
Q Consensus 197 ~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (502)
.+||+.|++.++++++..+..+...|+++..+++ ..+..++.+++|.++...+
T Consensus 171 ~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~~~~---------------------------~~~~~~~~l~~~~~~~~~~ 223 (394)
T PRK10213 171 IGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSH---------------------------QKQNTFRLLQRPGVMAGMI 223 (394)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHCCCCCccccc---------------------------chhHHHHHhcCHHHHHHHH
Confidence 8999999998877766555544434432210000 0011234667777776655
Q ss_pred HHHhhhh-hhhhHHHH-HHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHH
Q 010744 277 QGIVGSL-PWTAMVFF-TMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFS 354 (502)
Q Consensus 277 ~~~~~~~-~~~~~~~~-~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 354 (502)
..+.... .+...++. |.+.+++|+++.+.+......+++.+++.++.+++.||.+++. .... ..+.....
T Consensus 224 ~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~-------l~~~-~~~~~~~~ 295 (394)
T PRK10213 224 AIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLA-------LAGA-PLVLAVSA 295 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhH-------HHHH-HHHHHHHH
Confidence 4433333 23334565 6777779999999999999999999999999999999854332 1111 11111111
Q ss_pred HHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 355 WFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
.+.. .. .++ .+......++.|++.+...+ ...+.+++..| +++++..++.....+++..+||.+.|.+.|..
T Consensus 296 ~~l~-~~--~~~-~~~~~~~~~l~G~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~ 367 (394)
T PRK10213 296 LVLT-LW--GSD-KIVATGVAIIWGLTFALVPV-GWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNI 367 (394)
T ss_pred HHHH-HH--hhh-HHHHHHHHHHHHHHHHhhhH-HHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 1111 11 122 23344566777888777666 56667787777 56778888888888999999999999999975
No 26
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=4.5e-35 Score=286.19 Aligned_cols=362 Identities=15% Similarity=0.049 Sum_probs=277.7
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHH
Q 010744 37 LGISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCW 116 (502)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 116 (502)
++.+.....+.+..++..++...+.+.+|.+.+++|.++.+.++..+.+.+++.+++++.|+++||+|||+++..+.++.
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 88 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFF 88 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 55667777788888888888888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCc
Q 010744 117 AFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGV 196 (502)
Q Consensus 117 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~ 196 (502)
+++.+++.++++++.+++.|+++|++.+...+...+.+.|++|+++|.++.++......+|..++|.+++.+.+.
T Consensus 89 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~----- 163 (406)
T PRK15402 89 ILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHV----- 163 (406)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----
Confidence 999999999999999999999999999988899999999999999999999999999999999999999999887
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHH
Q 010744 197 PGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVL 276 (502)
Q Consensus 197 ~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (502)
.+||+.|++.+++.++..+..++..||++...+++ .+.++..+..+.++++|.++...+
T Consensus 164 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~ 222 (406)
T PRK15402 164 LPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEK---------------------LSLKELGRDYKLVLKNRRFVAGAL 222 (406)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHhCCCCCcccccc---------------------ccHHHHHHHHHHHHcCcHHHHHHH
Confidence 89999999988888777666555554432211000 011223345567888888877666
Q ss_pred HHHhhhhhhhh-HHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHH
Q 010744 277 QGIVGSLPWTA-MVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFS 354 (502)
Q Consensus 277 ~~~~~~~~~~~-~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 354 (502)
..++....... ..+.|.++++ +|.++.+.+.......++.+++.++.+++.||+++|+.. ..+..+.....
T Consensus 223 ~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~-------~~~~~~~~~g~ 295 (406)
T PRK15402 223 ALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLI-------RMGLWPMVAGL 295 (406)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH-------HHHHHHHHHHH
Confidence 55444333323 3567888765 899999999888877888889999999999999988732 11111111111
Q ss_pred HHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhc
Q 010744 355 WFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMF 433 (502)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~ 433 (502)
.............+.......++.|++.+...+ ........ .+++++|+..+..+....++..+|+.+.+.+.+..+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~-~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~ 372 (406)
T PRK15402 296 LLAALATVISSHAYLWLTAGLSLYAFGIGLANA-GLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGG 372 (406)
T ss_pred HHHHHHHHcccccHHHHHHHHHHHHHHHHHHhh-hHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCc
Confidence 111111101112233345666777777776655 34444433 345899999999999999999999999999988754
No 27
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=4.6e-35 Score=287.96 Aligned_cols=363 Identities=13% Similarity=0.148 Sum_probs=248.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHH-HHHH-----HHHhhhcchhhhhhhhcCCchhHHHH
Q 010744 39 ISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLT-FIRN-----FVQGLSSPLAGVLVINYDRPAVLTIG 112 (502)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~-s~~~-----~~~~~~~~~~G~l~dr~Grr~~l~~~ 112 (502)
|++....++++.+++++|+..+++..|.+.+|++.++.+.+.+. +... ++..+++++.|+++||+|||++++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 45578889999999999999999999999999999888866543 3322 23347889999999999999999999
Q ss_pred HHHHHHHHHHHHhhhHHHH--------HHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHH
Q 010744 113 ILCWAFSTAAVGASQHFLH--------VGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVL 184 (502)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~--------l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~ 184 (502)
.+++++++++++++++++. ++++|+++|++.+...+....++.|++|+++|++++++...+..+|..+++.+
T Consensus 93 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~ 172 (434)
T PRK15075 93 LSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALL 172 (434)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999874 68899999999999999999999999999999999999999999999888888
Q ss_pred HHHHhhhcc---cCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHH
Q 010744 185 ATIMAGHQF---WGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMA 261 (502)
Q Consensus 185 ~~~l~~~~~---~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (502)
++.+..... .+..|||++|++..+...+ .......+||++...++ ..+. +.++.
T Consensus 173 g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~-~~~~~~~~~e~~~~~~~---------------~~~~----~~~~~--- 229 (434)
T PRK15075 173 GYLLNQWLSPAQMAEWGWRIPFLIGCLIVPF-IFLIRRSLEETEEFLAR---------------KHRP----SMREI--- 229 (434)
T ss_pred HHHHHHhCCHHHHhccchHHHHHHHHHHHHH-HHHHHHhcCCCHHHHHh---------------hhcc----ccccH---
Confidence 887643110 1237999999975443221 11111112221100000 0000 00111
Q ss_pred HhhhcchhHHHHH-HHHHHhhhh-hhhhHHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcc
Q 010744 262 TKAVIKVPTFQII-VLQGIVGSL-PWTAMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSG 338 (502)
Q Consensus 262 ~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~ 338 (502)
.+...+++..+.. ....+.... .+....|.|.|+++ +|++..+.++......++++++.++.|++.||++||+..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~-- 307 (434)
T PRK15075 230 FRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVL-- 307 (434)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH--
Confidence 1112233333322 222222222 33444789999987 899999999888888999999999999999999998732
Q ss_pred hhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhh-h
Q 010744 339 RVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGS-F 417 (502)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-~ 417 (502)
. .+..+...............++ ........++.+++.+...+ ....+..|.+|++.|+++.++.+.+... +
T Consensus 308 ---~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~-~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~ 380 (434)
T PRK15075 308 ---I--AFTVLAILTAYPALSWLVAAPS-FARMLAVELWLSFLYGSYNG-AMVVALTEVMPAEVRTAGFSLAYSLATAIF 380 (434)
T ss_pred ---H--HHHHHHHHHHHHHHHHHHcCCc-hHHHHHHHHHHHHHHHHHHh-hHHHHHHHHCCCCccchheeHHHHHHHHHH
Confidence 1 1111111111111111111222 22222333444555554444 4567789999999999999997666665 5
Q ss_pred hhhhHHHHHHHHHHhc
Q 010744 418 SSFAAPLVGILSEKMF 433 (502)
Q Consensus 418 ~~~~~~~~g~l~~~~~ 433 (502)
+.++|.+.|++.|..+
T Consensus 381 g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 381 GGFTPAISTWLIHVTG 396 (434)
T ss_pred hhhHHHHHHHHHHhcC
Confidence 8899999999999864
No 28
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-35 Score=269.53 Aligned_cols=360 Identities=14% Similarity=0.107 Sum_probs=292.7
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHH
Q 010744 36 VLGISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILC 115 (502)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 115 (502)
++.+++.+....+...+.+.....++++.+.+.+|+|+|++|.+++.++..+..++..++.|.+.||||.|++..++.++
T Consensus 9 k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l 88 (417)
T COG2223 9 KRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLL 88 (417)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHH
Confidence 34566777778888888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhH---HHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhc
Q 010744 116 WAFSTAAVGASQH---FLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQ 192 (502)
Q Consensus 116 ~~~~~~~~~~~~~---~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~ 192 (502)
..+..+..+++.+ +|++++.+++.|++ |+.+......+++|||||++|.++|++. ..++|..+...++..+...
T Consensus 89 ~~IP~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~- 165 (417)
T COG2223 89 LLIPCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVA- 165 (417)
T ss_pred HHHHHHHHHHHccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHH-
Confidence 9999999999754 45999999999998 7778888999999999999999999999 9999999999999999887
Q ss_pred ccCccc---chHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhH-HHHhhhcch
Q 010744 193 FWGVPG---WRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESW-MATKAVIKV 268 (502)
Q Consensus 193 ~~~~~~---wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 268 (502)
.+ ||....+..+..++..+..++..+|.++.+... ++.. ...+.++++
T Consensus 166 ----~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~------------------------~~~~~~~~~~v~~~ 217 (417)
T COG2223 166 ----FGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASV------------------------KPQLPAQLKAVFSN 217 (417)
T ss_pred ----HhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccc------------------------cccchhHHHHHhcC
Confidence 77 999999999999998999998888765532221 1111 455667888
Q ss_pred hHHHHHHHHHHhhhhhhhhH-HHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhh
Q 010744 269 PTFQIIVLQGIVGSLPWTAM-VFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFS 346 (502)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 346 (502)
+..|.+.+..+..+..+..+ .++|.|+++ +|.++.+++.+.....+.+.+.++++|+++||+|.+|.. ...
T Consensus 218 ~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~-------~~~ 290 (417)
T COG2223 218 KDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVT-------LAV 290 (417)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHH-------HHH
Confidence 88888888877777766666 789999987 999999999999999999999999999999999998842 111
Q ss_pred hhhhhhHHHHHhhhccCC--cchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHH
Q 010744 347 AFMGIPFSWFLLTAIPQS--VSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPL 424 (502)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~ 424 (502)
...+..+..+........ ...........+..++..+.... ..+.++...+| ++.|.+.|+...++.+|+..-|..
T Consensus 291 f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnG-svfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~ 368 (417)
T COG2223 291 FVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNG-SVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLA 368 (417)
T ss_pred HHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcc-hheeechHHHH-hhhhHHHHHHHHhccccccchhHH
Confidence 111121211222111111 12233344445555666666665 67888888887 578999999999999999999999
Q ss_pred HHHHHHHhcCC
Q 010744 425 VGILSEKMFGY 435 (502)
Q Consensus 425 ~g~l~~~~~~~ 435 (502)
.|...+.++++
T Consensus 369 ~g~~~~~tg~~ 379 (417)
T COG2223 369 FGVSLDLTGSY 379 (417)
T ss_pred HHHHHHhcccH
Confidence 99999998755
No 29
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=2.6e-35 Score=286.24 Aligned_cols=352 Identities=13% Similarity=0.047 Sum_probs=264.9
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHH
Q 010744 38 GISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWA 117 (502)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 117 (502)
++++....+++..++.+.+....++.+|.+.+++|+|.++.+++.+.+.+++.+++++.|++.||+|||+++..+.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~ 83 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMI 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 45566677788889999998999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcc
Q 010744 118 FSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVP 197 (502)
Q Consensus 118 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~ 197 (502)
++.+++++++|++.+++.|+++|++.+...+...+++.|++|+++|+++++..+....+|..++|.+.+.+... ..
T Consensus 84 i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~----~~ 159 (394)
T PRK03699 84 LAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLAR----SI 159 (394)
T ss_pred HHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----cc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998887642 16
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHH
Q 010744 198 GWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQ 277 (502)
Q Consensus 198 ~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (502)
+||+.|++.+++.++..++.++ .+.|+.+.+++ + + ++.. .+..+ ++.++...+.
T Consensus 160 gw~~~f~~~~~~~~~~~~~~~~-~~~p~~~~~~~-~-~-----------~~~~-----------~~~~~-~~~~~~~~~~ 213 (394)
T PRK03699 160 EWYWVYACIGLVYVAIFILTLF-SEFPALGKHAP-K-A-----------DKPV-----------AKEKW-GIGVLFLAIA 213 (394)
T ss_pred cHHHHHHHHHHHHHHHHHHHHh-cCCccccccCc-c-c-----------cCcc-----------ccccC-ChHHHHHHHH
Confidence 9999999988877666554443 22222111000 0 0 0000 00011 2334444443
Q ss_pred HHhhhhh-hhhHHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHH
Q 010744 278 GIVGSLP-WTAMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSW 355 (502)
Q Consensus 278 ~~~~~~~-~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~ 355 (502)
.++.... +....|+|.|+++ +|+++.+++.+.+...++..+++++.+++.||+++|+.. . ....+.....
T Consensus 214 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l-----~--~~~~~~~~~~- 285 (394)
T PRK03699 214 ALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRIL-----T--VLAGLALVLM- 285 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHH-----H--HHHHHHHHHH-
Confidence 3333333 3445899999976 899999999999999999999999999999999998742 1 1111111111
Q ss_pred HHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhc
Q 010744 356 FLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMF 433 (502)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~ 433 (502)
..+ .. .++. .......+..|++.+...+ ...+...|..| +.++...+......++|+.++|.+.|++.|..+
T Consensus 286 ~~~-~~--~~~~-~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g 357 (394)
T PRK03699 286 YLF-VN--TDDP-SHLLYAILGLGFFSSAIYT-TIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFG 357 (394)
T ss_pred HHH-HH--cCCc-hHHHHHHHHHHHHHHHHHH-HHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhC
Confidence 111 11 1222 2233455667776666655 45566667665 556788899999999999999999999999853
No 30
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=2.8e-35 Score=294.41 Aligned_cols=383 Identities=13% Similarity=0.094 Sum_probs=260.3
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhc--------CCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCch
Q 010744 36 VLGISLSLILINLAAIMERADENLLPSVYKEVSEAF--------NAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPA 107 (502)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--------~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~ 107 (502)
.++..+.+.+..++.+.++++...+++..|.+.+++ +.+..+.+++.+.+.++..++++++|+++||+|||+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~ 86 (479)
T PRK10077 7 SSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRD 86 (479)
T ss_pred chHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 355667777888889999999999999999999988 788899999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhh------------hHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHh
Q 010744 108 VLTIGILCWAFSTAAVGAS------------QHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGT 175 (502)
Q Consensus 108 ~l~~~~~~~~~~~~~~~~~------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 175 (502)
+++++.++++++.++++++ ++++.++++|+++|++.|...+...++++|++|+++|++++++.+.+..
T Consensus 87 ~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~ 166 (479)
T PRK10077 87 SLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAII 166 (479)
T ss_pred HHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHH
Confidence 9999999999998888763 3356788999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHhhhcc---cCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCC-Cc
Q 010744 176 MGGIGGGVLATIMAGHQF---WGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNT-SV 251 (502)
Q Consensus 176 ~G~~~g~~~~~~l~~~~~---~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 251 (502)
+|.++++.++..+..... .+..+||+.|++.+++.++..+..++++|+|++...+++.++.+ ......... ..
T Consensus 167 ~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~ 243 (479)
T PRK10077 167 FGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAE---GILRKIMGNTLA 243 (479)
T ss_pred HHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHH---HHHHHHcCChhH
Confidence 999999888776643210 12369999999988888777666666665554432222111110 000000000 00
Q ss_pred chhHHHhHHHHh-------hhcchhHHHHHH---HHHHhhhhhh-hhHHHHHHHHHHhCCChhhHHHHHHHHHhhhcccc
Q 010744 252 SSVWLESWMATK-------AVIKVPTFQIIV---LQGIVGSLPW-TAMVFFTMWFELIGFDHSSTAALLSLFAIGCAVGS 320 (502)
Q Consensus 252 ~~~~~~~~~~~~-------~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~ 320 (502)
+...++.....+ ..+......... ...+.....+ ....+.|.+.++.|.+.....+.....++..+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~ 323 (479)
T PRK10077 244 TQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFT 323 (479)
T ss_pred HHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHH
Confidence 000111111110 011100000000 0011111111 22256688888889888777777777888899999
Q ss_pred cchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCC
Q 010744 321 FLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPA 400 (502)
Q Consensus 321 ~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~ 400 (502)
++.+++.||+|||+.. ..+..+..+.............. .......+.+++.+.+....|..+.++.|.+|+
T Consensus 324 ~~~g~l~dr~g~r~~~-------i~~~~~~~v~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 395 (479)
T PRK10077 324 VLAIMTVDKFGRKPLQ-------IIGALGMAIGMFSLGTAFYTQAP-GIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPN 395 (479)
T ss_pred HHHHHHHHHhcChHHH-------HHhHHHHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHHhccccchhHHHhHhhCCh
Confidence 9999999999998732 12222111111111111111111 122223344445444443333678999999999
Q ss_pred CchhhHHHHHHHhhhhhhhhhHHHHHHHH
Q 010744 401 KHRTMIYAFDRAFEGSFSSFAAPLVGILS 429 (502)
Q Consensus 401 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~ 429 (502)
++|+++.|+.+.+.++++.+++.+.+.+.
T Consensus 396 ~~r~~~~g~~~~~~~~g~~~~~~~~p~~~ 424 (479)
T PRK10077 396 AIRGKALAIAVAAQWIANYFVSWTFPMMD 424 (479)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 99999999999999999999988777655
No 31
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=7e-35 Score=286.41 Aligned_cols=368 Identities=13% Similarity=0.103 Sum_probs=251.2
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhchhhHHH-HHhhc--CCCCCCchHHH-----HHHHHHHhhhcchhhhhhhhcCCchh
Q 010744 37 LGISLSLILINLAAIMERADENLLPSVYKE-VSEAF--NAGPSDLGYLT-----FIRNFVQGLSSPLAGVLVINYDRPAV 108 (502)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~--~~s~~~~g~~~-----s~~~~~~~~~~~~~G~l~dr~Grr~~ 108 (502)
.++++.+...+++.+++++|...++.+.|. +.+++ +.++. .+++. ++..++..+++++.|+++||+|||++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~ 96 (438)
T PRK09952 18 SRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRM 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHH
Confidence 345567788888999999999999888875 55565 66665 46554 34556677899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhHHH--------HHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhH
Q 010744 109 LTIGILCWAFSTAAVGASQHFL--------HVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIG 180 (502)
Q Consensus 109 l~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 180 (502)
+..+.++++++++++++++|++ .++++|+++|++.|..++....++.|++|+++|++..+..+.+..+|.++
T Consensus 97 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l 176 (438)
T PRK09952 97 LMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLL 176 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987 58889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcc---cCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHH
Q 010744 181 GGVLATIMAGHQF---WGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLE 257 (502)
Q Consensus 181 g~~~~~~l~~~~~---~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (502)
+..+...+..... ....|||++|++.+++.++...+....+|+|++...+.+.++ .+++.+.
T Consensus 177 ~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~-------------~~~~~~~-- 241 (438)
T PRK09952 177 STGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAA-------------AKKRIPV-- 241 (438)
T ss_pred HHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhccc-------------ccccCCH--
Confidence 9888776653211 113799999999877655433322222333322111100000 0000001
Q ss_pred hHHHHhhhcchhHHHHHHH-HHHhh-hhhhhhHHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhcccc
Q 010744 258 SWMATKAVIKVPTFQIIVL-QGIVG-SLPWTAMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAY 334 (502)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~ 334 (502)
.+.+++++..+.... ..+.. ...+...+|.|.|+++ +|++...........++..+++.++.|+++||++||+
T Consensus 242 ----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~ 317 (438)
T PRK09952 242 ----IEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRR 317 (438)
T ss_pred ----HHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchH
Confidence 112334454444432 22222 2334445788998876 8888876555555667777888889999999999987
Q ss_pred CCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhh
Q 010744 335 PHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFE 414 (502)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~ 414 (502)
.. ..+.++.............. .+.........++.+++.+...+ ...+++.|.+|++.|+++.|+.+...
T Consensus 318 ~~-------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~e~~p~~~r~tg~g~~~~~~ 388 (438)
T PRK09952 318 VY-------ITGALIGTLSAFPFFMALEA-QSIFWIVFFSIMLANIAHDMVVC-VQQPMFTEMFGASYRYSGAGVGYQVA 388 (438)
T ss_pred HH-------HHHHHHHHHHHHHHHHHHHc-CChHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCcchhHHHHhHHHHHH
Confidence 32 11111111111111111111 12223333344455666665555 56788999999999999999977665
Q ss_pred h-hhhhhhHHHHHHHHHHhc
Q 010744 415 G-SFSSFAAPLVGILSEKMF 433 (502)
Q Consensus 415 ~-~~~~~~~~~~g~l~~~~~ 433 (502)
. +++.++|.+.|++.+..+
T Consensus 389 ~~lgg~~~p~i~g~l~~~~~ 408 (438)
T PRK09952 389 SVVGGGFTPFIAAALVTYFG 408 (438)
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 5 788999999999998653
No 32
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=1e-35 Score=298.11 Aligned_cols=380 Identities=15% Similarity=0.085 Sum_probs=258.5
Q ss_pred hHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCC--------CCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHH
Q 010744 39 ISLSLILINLAAIMERADENLLPSVYKEVSEAFNAG--------PSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLT 110 (502)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s--------~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~ 110 (502)
.+.....+.++.++..++....++..|.+.++++.+ ..+.+++.+++.++..++++++|+++||+|||++++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~ 105 (481)
T TIGR00879 26 VALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLL 105 (481)
T ss_pred HHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHH
Confidence 334444555566777888888899999999988877 789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhh---hHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHH--
Q 010744 111 IGILCWAFSTAAVGAS---QHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLA-- 185 (502)
Q Consensus 111 ~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~-- 185 (502)
.+.++++++.+++.+. .+++.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|.++++.++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~ 185 (481)
T TIGR00879 106 IIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSG 185 (481)
T ss_pred HHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998654 44568999999999999999999999999999999999999999999999999999999
Q ss_pred -HHHhhhcccCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhH---------
Q 010744 186 -TIMAGHQFWGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVW--------- 255 (502)
Q Consensus 186 -~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 255 (502)
....+. .+||+.|++.++..++..+..++++++|++...+++.++.+....+.. ..........
T Consensus 186 ~~~~~~~-----~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 259 (481)
T TIGR00879 186 KVSLNNT-----LGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLR-GTSGEDKELLDELELIDIK 259 (481)
T ss_pred hhcCCCC-----ccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHh-CCCCCcHHHHHHHHHHHHH
Confidence 554444 799999999766665555555555554432211111100000000000 0000000000
Q ss_pred --------HHhHHHHhhhc---chhHHHHHHHHHHhhhhhhhh-HHHHHHHHHHhCCChhhHHHHHHHHHhhhcccccch
Q 010744 256 --------LESWMATKAVI---KVPTFQIIVLQGIVGSLPWTA-MVFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLG 323 (502)
Q Consensus 256 --------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~ 323 (502)
+.......+.. +.+.++...+..+........ ..+.|.++++.|++..+.+.......++.+++.++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 339 (481)
T TIGR00879 260 RSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVA 339 (481)
T ss_pred HHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 00001111111 223333333333333333333 367788888899999888888888999999999999
Q ss_pred hhhhhhhccccCCcchhHHhhhhhhhhhhHH-HHHhhhccCCcc-----hhHHHHHHHHHHHHHHhhhccCCCccchhcc
Q 010744 324 GVVADRISQAYPHSGRVMCAQFSAFMGIPFS-WFLLTAIPQSVS-----NYYTYAVTLVLMGLTISWNATAANGPMFAEV 397 (502)
Q Consensus 324 g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 397 (502)
+++.||++||+.. ..+..+..... .+.......... ... ......+.+.+.+....+....+..|.
T Consensus 340 g~l~d~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (481)
T TIGR00879 340 IFLVDRFGRRPLL-------LIGAAGMAICLFVLGILGASFVTGSSKSSGNV-AIVFILLFIAFFAMGWGPVPWVIVSEI 411 (481)
T ss_pred HHHHHHhcchHHH-------HHHHHHHHHHHHHHHHHhhcccCCcccchhHH-HHHHHHHHHHHHHccccCeehhhhhcc
Confidence 9999999998742 11111111111 111111111110 122 222222333333333333567778999
Q ss_pred cCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 398 VPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 398 ~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
+|++.|+++.|+.+...++++.++|.+.+.+.++.
T Consensus 412 ~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~ 446 (481)
T TIGR00879 412 FPLSLRPKGISIAVAANWLANFIVGFLFPTMLESI 446 (481)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999874
No 33
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=4.4e-35 Score=294.20 Aligned_cols=376 Identities=15% Similarity=0.184 Sum_probs=262.6
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHH
Q 010744 37 LGISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCW 116 (502)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 116 (502)
+++|+.+..+++..+++.++....++.+|.+.+++|+++.+.+++.+.+.+++.++.++.|+++||+|||+++..+.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 95 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLF 95 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 46677888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCc
Q 010744 117 AFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGV 196 (502)
Q Consensus 117 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~ 196 (502)
+++.+++++++|++.+++.|++.|++.+...+....++.|++|+++|++++++...+..+|..+++.+++.+.+.
T Consensus 96 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~----- 170 (496)
T PRK03893 96 SVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPV----- 170 (496)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhH---------HHHh----
Q 010744 197 PGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESW---------MATK---- 263 (502)
Q Consensus 197 ~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~---- 263 (502)
.+||+.|++..+..++..+.....++++++..+++ ++++..+..+... . .++....... ....
T Consensus 171 ~~w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (496)
T PRK03893 171 WGWRALFFIGILPIIFALWLRKNLPEAEDWKEKHA-GKAPVRTMVDILY--R-GEHRIINILLTLAAAAALWFCFAGNLQ 246 (496)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhcc-ccccchhHHHHHh--c-chhHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 89999998755443333222222333222111111 0000000000000 0 0000000000 0000
Q ss_pred -----------------------hhcchhHHHHHHHHHHhhhh-hhhhHHHHHHHHH-HhCCChhhHHHHHHHHHhhhcc
Q 010744 264 -----------------------AVIKVPTFQIIVLQGIVGSL-PWTAMVFFTMWFE-LIGFDHSSTAALLSLFAIGCAV 318 (502)
Q Consensus 264 -----------------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~ 318 (502)
...+.+.........+.... .+....++|.|++ ++|++..+++.+.+...++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~ 326 (496)
T PRK03893 247 NAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAV 326 (496)
T ss_pred chhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHH
Confidence 00000111111111111111 1223367899996 5999999999999999999999
Q ss_pred cccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhccc
Q 010744 319 GSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVV 398 (502)
Q Consensus 319 ~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 398 (502)
+.++.|++.||+++|+.. ..+..+..... +.. ..... ...+......+..+.......+ ....+++|.+
T Consensus 327 g~~~~g~l~dr~g~~~~~-------~~~~~~~~~~~-~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 395 (496)
T PRK03893 327 GCCVGGFLGDWLGTRKAY-------VCSLLISQLLI-IPV-FAIGG-ANVWVLGLLLFFQQMLGQGISG-LLPKLIGGYF 395 (496)
T ss_pred HHHHHHHHHHHhcchHHH-------HHHHHHHHHHH-HHH-hhccc-cHHHHHHHHHHHHHHHhcccch-hhHHHHHhhC
Confidence 999999999999988732 11111111111 111 11111 2222222333333322222233 4667888999
Q ss_pred CCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 399 PAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 399 p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
|+++|++++|+.+...++++.++|.+.|.+.|..
T Consensus 396 ~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~ 429 (496)
T PRK03893 396 DTEQRAAGLGFTYNVGALGGALAPILGALIAQRL 429 (496)
T ss_pred CHHHhhcccchhhhhhhHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999985
No 34
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=2.2e-35 Score=286.21 Aligned_cols=369 Identities=15% Similarity=0.166 Sum_probs=272.4
Q ss_pred HHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhh
Q 010744 48 LAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQ 127 (502)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 127 (502)
+.++....++..++...|.+.+++|.+..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.+++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 81 (379)
T TIGR00881 2 IGYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST 81 (379)
T ss_pred chhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh
Confidence 34667788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHH-HHHHHHhhhcccCcccchHHHHHH
Q 010744 128 HFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGG-VLATIMAGHQFWGVPGWRCAFILM 206 (502)
Q Consensus 128 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~-~~~~~l~~~~~~~~~~wr~~f~~~ 206 (502)
+++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++ .++..+.+. .+||+.|++.
T Consensus 82 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~~~~~~~ 156 (379)
T TIGR00881 82 SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL-----YSWHWVFIVP 156 (379)
T ss_pred hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhc-----CCchhHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 566666665 7999999999
Q ss_pred HHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhhh
Q 010744 207 ATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLPWT 286 (502)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (502)
+++.++..++.++..+++++....++.++.+.+..+...++++ ...+......++++++|.++...+..+.......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (379)
T TIGR00881 157 GIIAIIVSLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKE---EELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRT 233 (379)
T ss_pred HHHHHHHHHHHheeeCCCccccccCccccCccccccccccccc---ccccchHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 8888877777666655543322211111111110000000000 0001112234456778888777666655554433
Q ss_pred -hHHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCC
Q 010744 287 -AMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQS 364 (502)
Q Consensus 287 -~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (502)
...+.|.|+++ +|+++.+.+.......++.++++++.+++.||..+++.. ....... .......... .....
T Consensus 234 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~----~~~~~~~-~~~~~~~~~~-~~~~~ 307 (379)
T TIGR00881 234 GILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRG----PLAVFFM-ALIIVSLLVY-WLNPA 307 (379)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcch----HHHHHHH-HHHHHHHHHH-hcCcc
Confidence 34788999876 899999999999999999999999999999987544321 1111111 1111111111 11111
Q ss_pred cchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 365 VSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 365 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
.+ ........+..|+......+ ....+..|..|++.|+++.|+.+...++++.++|.+.|.+.|..
T Consensus 308 ~~-~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 373 (379)
T TIGR00881 308 AN-PLMDLICLFALGFLVYGPQM-LIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGF 373 (379)
T ss_pred hh-HHHHHHHHHHHHHHHhhhhH-HHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhh
Confidence 12 22333444555554433333 34567889999999999999999999999999999999999984
No 35
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=5.4e-35 Score=292.58 Aligned_cols=389 Identities=14% Similarity=0.072 Sum_probs=260.0
Q ss_pred ccchhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhc-----CCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhH
Q 010744 35 KVLGISLSLILINLAAIMERADENLLPSVYKEVSEAF-----NAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVL 109 (502)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l 109 (502)
..++++.++.++.++.+.+++|....+.+.|.+.+++ +.+..+.+++.+.+.++..++++++|+++||+|||+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~ 89 (502)
T TIGR00887 10 FGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVY 89 (502)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH
Confidence 3466778888899999999999999999999887753 33455778999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhH------HHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHH
Q 010744 110 TIGILCWAFSTAAVGASQH------FLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGV 183 (502)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~ 183 (502)
.++.+++.++.++++++++ ++.++++|+++|++.+...+....++.|++|+++|++++++.+....+|.++++.
T Consensus 90 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~ 169 (502)
T TIGR00887 90 GMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAI 169 (502)
T ss_pred HHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998765 7899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcc------------------cCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCC-CCCchhhHh
Q 010744 184 LATIMAGHQF------------------WGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTG-ENFDRDELV 244 (502)
Q Consensus 184 ~~~~l~~~~~------------------~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 244 (502)
++..+..... ....+||+.|.+.++++++..+..+++||+|++...++++++ +.....+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~ 249 (502)
T TIGR00887 170 VALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVL 249 (502)
T ss_pred HHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHh
Confidence 9877643110 012479999999888888777777778888887544433221 111010000
Q ss_pred hh---cCCCc----chhHHHhHHHHhhhcch---hHH-HHH---HHHHHhhh-hhhhhHHHHHHHHHHhCCChhhHHH--
Q 010744 245 EK---GNTSV----SSVWLESWMATKAVIKV---PTF-QII---VLQGIVGS-LPWTAMVFFTMWFELIGFDHSSTAA-- 307 (502)
Q Consensus 245 ~~---~~~~~----~~~~~~~~~~~~~~~~~---~~~-~~~---~~~~~~~~-~~~~~~~~~~~~~~~~g~s~~~~~~-- 307 (502)
.. +...+ +...++....+++++++ ++. ... ....+... ..++...|.|.++++.|++..+.+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~ 329 (502)
T TIGR00887 250 QVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNA 329 (502)
T ss_pred ccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcCCCCccchhH
Confidence 00 00000 00000001123333321 111 111 11112121 2234446788988888887543211
Q ss_pred ----------HHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHH
Q 010744 308 ----------LLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVL 377 (502)
Q Consensus 308 ----------~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (502)
......++.+++.++.+++.||+|||+.. ..+..+......+........... ....... .
T Consensus 330 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l-------~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~-~ 400 (502)
T TIGR00887 330 YEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQ-------LMGFFILTVLFFVLGFAYNHLSTH-GFLAIYV-L 400 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHH-------HHHHHHHHHHHHHHHHHHHhcchh-HHHHHHH-H
Confidence 12334456677888999999999999742 111111111111111111111111 1111111 1
Q ss_pred HHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 378 MGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 378 ~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
..+..+....+..+.+..|.+|++.|+++.|+.+.+++++++++|.+.+.+.+..
T Consensus 401 ~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 455 (502)
T TIGR00887 401 AQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHG 455 (502)
T ss_pred HHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccc
Confidence 1111122222256777899999999999999999999999999999999999853
No 36
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=3.6e-34 Score=285.45 Aligned_cols=374 Identities=13% Similarity=0.190 Sum_probs=280.8
Q ss_pred HHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHH
Q 010744 42 SLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTA 121 (502)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~ 121 (502)
.+..++++.++..++.....+.+|.+.+|+|.++.+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~ 90 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSL 90 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 45667778888888988899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchH
Q 010744 122 AVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRC 201 (502)
Q Consensus 122 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~ 201 (502)
+++++++++.+++.|+++|++.+...+...+++.|++|+++|+++.++......+|..+||.+++.+.+. .+||+
T Consensus 91 ~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~-----~gw~~ 165 (471)
T PRK10504 91 FCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEY-----ASWHW 165 (471)
T ss_pred HHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhh-----ccHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999987 89999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhh-------H-hhhcCC-Ccch-----------------hH
Q 010744 202 AFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDE-------L-VEKGNT-SVSS-----------------VW 255 (502)
Q Consensus 202 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~-~~~~-----------------~~ 255 (502)
.|++......+..++.....|+.+....+. +........ . ....+. .... .+
T Consensus 166 ~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (471)
T PRK10504 166 IFLINIPVGIIGAIATLMLMPNYTMQTRRF--DLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLL 243 (471)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccccCCCC--ChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHH
Confidence 999988877777666665555432211111 000000000 0 000000 0000 00
Q ss_pred H-----HhHHHHhhhcchhHHHHHHHHHHhhhhhhhhH-HHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhh
Q 010744 256 L-----ESWMATKAVIKVPTFQIIVLQGIVGSLPWTAM-VFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVAD 328 (502)
Q Consensus 256 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d 328 (502)
+ +... ..+++|+|.++..+...++....+... .+.|.|++. .|.++.+.++......++.+++.++.+++.|
T Consensus 244 ~~~~~~~~~~-~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~ 322 (471)
T PRK10504 244 HARNNNRALF-SLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVN 322 (471)
T ss_pred HHhcCCCCcc-CHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000 113678888888777766666555555 568889886 8999999999998888888888899999999
Q ss_pred hhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHH
Q 010744 329 RISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYA 408 (502)
Q Consensus 329 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g 408 (502)
|+++|+.. ..+..+..+.. ..+....... +.+......++.|++.+...+ .......+..|++.++.++|
T Consensus 323 r~g~~~~~-------~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~~ 392 (471)
T PRK10504 323 RFGYRRVL-------VATTLGLALVS-LLFMLVALLG-WYYLLPFVLFLQGMVNSTRFS-SMNTLTLKDLPDNLASSGNS 392 (471)
T ss_pred HcCchHHH-------HHHHHHHHHHH-HHHHhccccc-cHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCCHHhccchHH
Confidence 99998731 12222111111 1111112122 222233445556666666665 46777788899999999999
Q ss_pred HHHHhhhhhhhhhHHHHHHHHHHhc
Q 010744 409 FDRAFEGSFSSFAAPLVGILSEKMF 433 (502)
Q Consensus 409 ~~~~~~~~~~~~~~~~~g~l~~~~~ 433 (502)
+.++..++|.++|+.+.|.+.+..+
T Consensus 393 ~~~~~~~~g~~ig~~i~g~ll~~~g 417 (471)
T PRK10504 393 LLSMIMQLSMSIGVTIAGLLLGLFG 417 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999853
No 37
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=5.5e-35 Score=286.46 Aligned_cols=347 Identities=13% Similarity=0.106 Sum_probs=262.9
Q ss_pred HHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHh--
Q 010744 48 LAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGA-- 125 (502)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~-- 125 (502)
+..++..+......+.+|.+.++++.++.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+..+.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~ 103 (417)
T PRK10489 24 IARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNA 103 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHH
Confidence 334555556667788899999999999999999999999999999999999999999999999998888877765543
Q ss_pred ---hhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHH
Q 010744 126 ---SQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCA 202 (502)
Q Consensus 126 ---~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~ 202 (502)
.++++.+++.|+++|++.+...+...+++.|++|+++|+++.++......+|..+||.+++.+.+. .+|++.
T Consensus 104 ~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~-----~~~~~~ 178 (417)
T PRK10489 104 FLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAA-----GGVAWN 178 (417)
T ss_pred HcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH-----HhhHHH
Confidence 568899999999999999988899999999999999999999999999999999999999999887 799999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhh
Q 010744 203 FILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGS 282 (502)
Q Consensus 203 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (502)
|++.++..++..++.+.+++++++..+++ ...++..+..+..+++|.++...+..++..
T Consensus 179 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (417)
T PRK10489 179 YGLAAAGTFITLLPLLRLPALPPPPQPRE---------------------HPLRSLLAGFRFLLASPVVGGIALLGGLLT 237 (417)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCcccc---------------------cchHHHHHHHHHHHcChHHHHHHHHHHHHH
Confidence 99988777666655555443322110000 011222334455677777666554444333
Q ss_pred hhhhhHHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhc
Q 010744 283 LPWTAMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAI 361 (502)
Q Consensus 283 ~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (502)
.......++|.|+++ +|.++...+++.+...++.+++.++.+++.||.++++. ...+..+.. +.+...
T Consensus 238 ~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~-------l~~~~~~~~----~~~~~~ 306 (417)
T PRK10489 238 MASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLL-------MLLSTLGSF----LAVGLF 306 (417)
T ss_pred HHHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchH-------HHHHHHHHH----HHHHHH
Confidence 333444678999988 89999999999999999999999999999998655542 111111111 111111
Q ss_pred cCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhc
Q 010744 362 PQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMF 433 (502)
Q Consensus 362 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~ 433 (502)
...+ .+....+..++.|++.+...+ ...++++|..|++.||+++|+.+...+++..++|.+.|.+.|..+
T Consensus 307 ~~~~-~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g 376 (417)
T PRK10489 307 GLMP-MWILAVLCLALFGYLSAISSL-LQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMT 376 (417)
T ss_pred Hccc-hHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc
Confidence 1122 234445666677777766555 566788999999999999999999999999999999999999864
No 38
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=5.1e-34 Score=277.34 Aligned_cols=350 Identities=14% Similarity=0.137 Sum_probs=266.7
Q ss_pred HHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHH
Q 010744 44 ILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAV 123 (502)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 123 (502)
..+....+....+.....+..|.+.+++|.++.+.+++.+++.++..++++++|+++||+|||+++..+.++.+++.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~ 87 (385)
T TIGR00710 8 LLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGL 87 (385)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 33334445566777788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHH
Q 010744 124 GASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAF 203 (502)
Q Consensus 124 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f 203 (502)
+++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..+++.+++.+.+. .+||+.|
T Consensus 88 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~-----~~~~~~~ 162 (385)
T TIGR00710 88 ALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVW-----LSWHAIF 162 (385)
T ss_pred HHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999887 8999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhh
Q 010744 204 ILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSL 283 (502)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (502)
++.+++.++..+..++..||++..+++. ..++..+..++.++++.++...+.......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (385)
T TIGR00710 163 AFLSLAGILLSALIFFILPETLPYEARI----------------------QISTYFETFLLLLKSKMFWGYALIYGASFG 220 (385)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcccC----------------------CHHHHHHHHHHHHcCchhHHHHHHHHHHHH
Confidence 9998888777776666555533211110 001122345567778887776655544443
Q ss_pred hhh-hHHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhc
Q 010744 284 PWT-AMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAI 361 (502)
Q Consensus 284 ~~~-~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (502)
.+. ...+.|.++++ +|.++.+.+.+.....++.+++.++.+++.||+++|+... .+..+............
T Consensus 221 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 293 (385)
T TIGR00710 221 GFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLR-------MGLILFAVSAVLLEITA 293 (385)
T ss_pred HHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH-------HHHHHHHHHHHHHHHHH
Confidence 333 33567888875 8999999999999999999999999999999999887421 11111111111111111
Q ss_pred cCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHH
Q 010744 362 PQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILS 429 (502)
Q Consensus 362 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~ 429 (502)
......+........+.|++.+...+ .......|..| ++++++.++.+...+.++.+.+.+.+.+.
T Consensus 294 ~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~~ 359 (385)
T TIGR00710 294 ILGLGSWAMIIGPMMFVGIGNSMISS-IAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLIH 359 (385)
T ss_pred HhccchHHHHHHHHHHHHHHHHHHHH-HHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 11112233344555667777776666 56677777776 67999999999998887777666666443
No 39
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=4.1e-34 Score=281.56 Aligned_cols=379 Identities=12% Similarity=0.104 Sum_probs=266.3
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHH
Q 010744 38 GISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWA 117 (502)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 117 (502)
.++..+..+.+.+...+.++.......|.+.+ +|.++++.+++.+++.++..+++++.|+++||+|||+++..+.++.+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~ 102 (438)
T TIGR00712 24 LRWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSA 102 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHH
Confidence 35666677777778888888777888888876 59999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh----hHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcc
Q 010744 118 FSTAAVGAS----QHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQF 193 (502)
Q Consensus 118 ~~~~~~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~ 193 (502)
++.++.++. ++++.+.+.|++.|++.+...+.....+.|++|+++|++++++.+.+..+|..+++.+.+...+.
T Consensus 103 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~-- 180 (438)
T TIGR00712 103 AVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAW-- 180 (438)
T ss_pred HHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHH--
Confidence 999887764 56778889999999999999998999999999999999999999999999999998887764432
Q ss_pred cCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHH
Q 010744 194 WGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQI 273 (502)
Q Consensus 194 ~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (502)
..+||+.|++.++++++..++.+++.+|+++....++.++.+.+..+...++.+ .+.+.++.. .+.+++++.++.
T Consensus 181 --~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~ 255 (438)
T TIGR00712 181 --FNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAE-QELTAKEIF--MQYVLPNKLLWY 255 (438)
T ss_pred --hhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcccccccccccccc-cccchHHHH--HHHHccCchHHH
Confidence 169999999999988887776666665543321111000000000000000000 001111111 124678888887
Q ss_pred HHHHHHhhhhh-hhhHHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhh
Q 010744 274 IVLQGIVGSLP-WTAMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGI 351 (502)
Q Consensus 274 ~~~~~~~~~~~-~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~ 351 (502)
..+..++.... +...+|.|.|+++ .|+++.++++...+..+.+++++++.|++.||+++++... .. .......
T Consensus 256 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~----~~-~~~~~~~ 330 (438)
T TIGR00712 256 IAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGA----TG-VFFMTLV 330 (438)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccH----HH-HHHHHHH
Confidence 76665554443 4455889999987 7999999999999999999999999999999997554211 11 0011111
Q ss_pred hHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhh-hhhHHHHHHHHH
Q 010744 352 PFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFS-SFAAPLVGILSE 430 (502)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~-~~~~~~~g~l~~ 430 (502)
......+.... ..+. +......+..|++...... .......|.+|++.|++++|+.+...++++ .++|.+.|.+.|
T Consensus 331 ~~~~~~~~~~~-~~~~-~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~ 407 (438)
T TIGR00712 331 TIAVIVYWMNP-AGNP-LVDMICMIVIGFLIYGPVM-LIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVD 407 (438)
T ss_pred HHHHHHHHhcC-CCch-HHHHHHHHHHHHHHccHHH-HHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHH
Confidence 11111111111 1122 2222334444443322111 123456788999999999999999988876 589999999999
Q ss_pred Hh
Q 010744 431 KM 432 (502)
Q Consensus 431 ~~ 432 (502)
..
T Consensus 408 ~~ 409 (438)
T TIGR00712 408 FF 409 (438)
T ss_pred hc
Confidence 85
No 40
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=1.8e-33 Score=274.09 Aligned_cols=354 Identities=11% Similarity=-0.001 Sum_probs=260.9
Q ss_pred HHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHH
Q 010744 43 LILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAA 122 (502)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 122 (502)
...+.+..+...++.....+.+|.+.+++|.+.++.++..+++.++++++++++|+++||+|||++++.+.++++++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 97 (413)
T PRK15403 18 PMALILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAA 97 (413)
T ss_pred HHHHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHH
Confidence 33345555666777888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHH
Q 010744 123 VGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCA 202 (502)
Q Consensus 123 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~ 202 (502)
+++++|++.++++|+++|++.+...+....++.|++|+++|++++++......+|..+||.+++.+.+. .|||+.
T Consensus 98 ~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~-----~gw~~~ 172 (413)
T PRK15403 98 TLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF-----VHWKVL 172 (413)
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCHHHH
Confidence 999999999999999999998877777888899999999999999999999999999999999999876 899999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhh
Q 010744 203 FILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGS 282 (502)
Q Consensus 203 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (502)
|++.+++.++..+..++..||++..+++ +. ..++..++.++++++|.++...+...+..
T Consensus 173 f~~~~~~~~i~~~~~~~~lp~~~~~~~~------~~---------------~~~~~~~~~~~ll~~~~~~~~~l~~~~~~ 231 (413)
T PRK15403 173 FAIIAVMGLIAFVGLLLAMPETVKRGAV------PF---------------SAKSVLRDFRNVFRNRLFLTGAATLSLSY 231 (413)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCccccCC------CC---------------ChHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 9999988877766655544543221100 00 01223445667889999998777666555
Q ss_pred hhhhhH-HHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhh
Q 010744 283 LPWTAM-VFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTA 360 (502)
Q Consensus 283 ~~~~~~-~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (502)
..+... .+.|.++++ +|+++.+.++.......+.+++..+.+++.++..+++... .......++..........
T Consensus 232 ~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~----~~~~~~~ig~~l~~~~~~~ 307 (413)
T PRK15403 232 IPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIW----RAVPIQLVGLALLIVGNLL 307 (413)
T ss_pred HHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHH----HHHHHHHHHHHHHHHHHHH
Confidence 544334 667999987 7999999999988788888887777777654443333210 0000011111111111111
Q ss_pred ccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHH
Q 010744 361 IPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEK 431 (502)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~ 431 (502)
. .+.+.......++.+++.+...+ ......-+ -.+..+|++.++.+.....+..+++...|++.+.
T Consensus 308 --~-~~~~~~~~~~~~l~~~G~~~~~p-~~~~~al~-~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~ 373 (413)
T PRK15403 308 --W-PHVWLWSVLGTSLYAFGIGLIFP-TLFRFTLF-SNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN 373 (413)
T ss_pred --c-cccHHHHHHHHHHHHHHHHHHhH-HHHHHHhc-cCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 1 12232234566666777666655 33322211 1223479999999999999999999999988877
No 41
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=1.6e-34 Score=278.67 Aligned_cols=353 Identities=17% Similarity=0.190 Sum_probs=276.6
Q ss_pred HHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHh
Q 010744 46 INLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGA 125 (502)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 125 (502)
+.++.++..+......+.+|.+.++++.++.+.+++.+++.++..++++++|+++||+|||+++..+.++.+++.++.++
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 83 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPF 83 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHH
Confidence 44566777777778888999999999999999999999999999999999999999999999999999999999999888
Q ss_pred hh-----HHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccch
Q 010744 126 SQ-----HFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWR 200 (502)
Q Consensus 126 ~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr 200 (502)
++ |++.+++.|+++|++.+...+...+++.|++|+++|++++++.+....+|.++||.+++.+.+. .+||
T Consensus 84 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~-----~g~~ 158 (365)
T TIGR00900 84 VALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYAT-----LGIK 158 (365)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH-----hhHH
Confidence 88 9999999999999999999999999999999999999999999999999999999999999987 8999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHh
Q 010744 201 CAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIV 280 (502)
Q Consensus 201 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (502)
+.|++.++..++..+..+...++++. .++. + +.+ +...++..+..+.++++|.++......+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~---~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (365)
T TIGR00900 159 WAIWVDAVGFAISALLIVSVRIPELA-ASEI-Q---ALS------------NAVLRDTREGIKFVLKNPLLRTLLLLALL 221 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccCC-Cccc-c---ccc------------hhHHHHHHhHHHHHHcCcHHHHHHHHHHH
Confidence 99999887666555544443222111 1000 0 000 01112233445667788888777666655
Q ss_pred hhhhh-hhH-HHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHH
Q 010744 281 GSLPW-TAM-VFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFL 357 (502)
Q Consensus 281 ~~~~~-~~~-~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (502)
....+ ... .+.|.+.++ +|.++.+.+.+.....++.+++.++.+++.||.++|+.. ..+..+..... ..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-------~~~~~~~~~~~-~~ 293 (365)
T TIGR00900 222 FNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALM-------TGAIFVIGLAI-LV 293 (365)
T ss_pred HHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHH-------HHHHHHHHHHH-HH
Confidence 54443 333 678888887 899999999999999999999999999999999988631 11111111111 11
Q ss_pred hhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 358 LTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
. ..... +.+...+..++.|++.+...+ ...++..|..|+++|+++.|+.+...++++.++|.+.|.+.|..
T Consensus 294 ~-~~~~~--~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 294 V-GLTPP--NFPLFLVLWFAIGVGYGPINV-PQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred H-Hhhch--hHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 1 11111 244455677788888887776 67888999999999999999999999999999999999999874
No 42
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=1.5e-34 Score=289.72 Aligned_cols=372 Identities=13% Similarity=0.194 Sum_probs=283.4
Q ss_pred HHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHH
Q 010744 41 LSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFST 120 (502)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 120 (502)
+.+..++++.++..++....++.+|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||++++.+.++.+++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 2 LLTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGS 81 (485)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 34567778889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccch
Q 010744 121 AAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWR 200 (502)
Q Consensus 121 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr 200 (502)
+++++++|++.+++.|+++|++.+...+...+++.|++|+++|+++++++.....+|..+||.+++++.++ .+||
T Consensus 82 ~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-----~~w~ 156 (485)
T TIGR00711 82 LLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIEN-----YHWR 156 (485)
T ss_pred HHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccC-----cCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999887 8999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhh--------------HhhhcCCCcchh------------
Q 010744 201 CAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDE--------------LVEKGNTSVSSV------------ 254 (502)
Q Consensus 201 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~------------ 254 (502)
+.|++.++++++..++.++..|++++...++ .+... ....+.......
T Consensus 157 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (485)
T TIGR00711 157 WIFLINVPIGIIVVVVAFFILPRDKPAASEN------FDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLV 230 (485)
T ss_pred ehhhhhhHHHHHHHHHHHHHcCCccccccCC------CcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHH
Confidence 9999998888777776666655533221111 11000 000000000000
Q ss_pred ------HHHhH----HHHhhhcchhHHHHHHHHHHhhhhh-hhhHHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccc
Q 010744 255 ------WLESW----MATKAVIKVPTFQIIVLQGIVGSLP-WTAMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFL 322 (502)
Q Consensus 255 ------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~ 322 (502)
.++.. ....+++++|.++...+..+..... +....++|.|+++ +|+++.++++......++.+++.++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~ 310 (485)
T TIGR00711 231 AIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPI 310 (485)
T ss_pred HHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 0012466777777766655554444 3444788999987 8999999999999999999999999
Q ss_pred hhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCc
Q 010744 323 GGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKH 402 (502)
Q Consensus 323 ~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~ 402 (502)
.|++.||+++|+. ...+..+..... ..+.................++.|++.+...+ .......+..|+++
T Consensus 311 ~g~l~~r~~~~~~-------~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~-~~~~~~~~~~~~~~ 381 (485)
T TIGR00711 311 AGRMGDKIDPRKL-------VTIGLILYAVGF-YWRAFTFTPDTPFLAIALPQFIRGFGMGCFFM-PLTTIALSGLPPHK 381 (485)
T ss_pred HHHHHhhcCcHHH-------HHHHHHHHHHHH-HHHhccCCCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCHHH
Confidence 9999999999863 122222111111 11110111222233344556777888777665 34556667789999
Q ss_pred hhhHHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 403 RTMIYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 403 ~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
++++.|+.+..+++|+.+|+.+.|.+.++.
T Consensus 382 ~g~~~~~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 382 IARGSSLSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998863
No 43
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=9.4e-34 Score=276.43 Aligned_cols=341 Identities=17% Similarity=0.142 Sum_probs=245.8
Q ss_pred HHHHHHHHHHHHHHHhhhhchhhHHH-HHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHH
Q 010744 41 LSLILINLAAIMERADENLLPSVYKE-VSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFS 119 (502)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 119 (502)
+.+..+++..++..++.....+.+|. +.+++|.|+.+.|++.+++.+++.+++++.|+++||+|||+++..+.++++++
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 94 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALS 94 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHH
Confidence 44455777778888888888888887 67899999999999999999999999999999999999999999999999888
Q ss_pred HHHHHhh--------hHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhh
Q 010744 120 TAAVGAS--------QHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGH 191 (502)
Q Consensus 120 ~~~~~~~--------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~ 191 (502)
.+.++++ .+++.+++.|+++|++.+...+...+++.|++|+|+|++++++.+.+..+|.++|+.+++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 174 (399)
T PRK05122 95 GLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHW 174 (399)
T ss_pred HHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHc
Confidence 7766553 25778999999999999999999999999999999999999999999999999999999999887
Q ss_pred cccCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHH
Q 010744 192 QFWGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTF 271 (502)
Q Consensus 192 ~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (502)
.|||+.+++.+++.++..+... +.|+...+++ + +.++++. .++.++
T Consensus 175 -----~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~----~---------------~~~~~~~---~~~~~~---- 220 (399)
T PRK05122 175 -----GGLAGLGLLIMLLALLGLLLAR---PRPAVPPVKG----E---------------RLPFRRV---LGRVWP---- 220 (399)
T ss_pred -----ccHHHHHHHHHHHHHHHHHHHh---cCCCCCCCCc----c---------------chhHHHH---HHHHHH----
Confidence 8999998876665443332221 1111110000 0 0011111 111111
Q ss_pred HHHHHHHHhhhhhhh-hHHHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhh
Q 010744 272 QIIVLQGIVGSLPWT-AMVFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMG 350 (502)
Q Consensus 272 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 350 (502)
...........+. ...+.|.|+++.|.+ +.+...+...++.++++++.+++.||+++|+.. ..+..+.
T Consensus 221 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~-------~~~~~~~ 289 (399)
T PRK05122 221 --YGMGLALASIGFGTIATFITLYYAARGWD--GAALALTLFGVAFVGARLLFGNLINRLGGLRVA-------IVSLLVE 289 (399)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHcccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHH-------HHHHHHH
Confidence 1111111122222 336778888776663 456666777888889999999999999987631 1111111
Q ss_pred hhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHH
Q 010744 351 IPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSE 430 (502)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~ 430 (502)
.... .... . .++ .+...+..++.|++.+...+ .......|..|+++|+++.|+.+...+++..++|.+.|.+.+
T Consensus 290 ~~~~-~~~~-~--~~~-~~~~~~~~~l~G~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 363 (399)
T PRK05122 290 ILGL-LLLW-L--APS-PWMALIGAALTGFGFSLVFP-ALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVAS 363 (399)
T ss_pred HHHH-HHHH-H--hcc-HHHHHHHHHHHHHhHHHHHH-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 1111 1 122 23344566778888776665 455667788899999999999999999999999999999998
Q ss_pred Hh
Q 010744 431 KM 432 (502)
Q Consensus 431 ~~ 432 (502)
..
T Consensus 364 ~~ 365 (399)
T PRK05122 364 WF 365 (399)
T ss_pred Hc
Confidence 74
No 44
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=2.6e-33 Score=272.90 Aligned_cols=357 Identities=14% Similarity=0.153 Sum_probs=254.1
Q ss_pred HHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHH
Q 010744 43 LILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAA 122 (502)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 122 (502)
+....++.++...........++.+.+|+|.++++.|++.+.+.+++.+++++.|++.||+|||+++..+.++.+++.++
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~ 94 (402)
T TIGR00897 15 LLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAA 94 (402)
T ss_pred hhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 33444444444444444445566777899999999999999999999999999999999999999999999999998776
Q ss_pred HH---h-hhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhh-hHHHHHHHHHhhhcccCcc
Q 010744 123 VG---A-SQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGG-IGGGVLATIMAGHQFWGVP 197 (502)
Q Consensus 123 ~~---~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~-~~g~~~~~~l~~~~~~~~~ 197 (502)
+. + .++++.+++.|+++|++.+...+...+.+.+++|+++|++++|+.+.+.++|. +++|.+++.+.+. .
T Consensus 95 ~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~-----~ 169 (402)
T TIGR00897 95 FIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPA-----F 169 (402)
T ss_pred HHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-----c
Confidence 53 3 35788899999999999988888888889999999999999999999999997 6899999888876 7
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHH
Q 010744 198 GWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQ 277 (502)
Q Consensus 198 ~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (502)
||+..++......++..++.+++.+++++..+++ + + .+.++..+..+.++++|.++...+.
T Consensus 170 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (402)
T TIGR00897 170 GEMNTLWSALAFVLTGGVIALFSNKDIFTPQHMQ-T-R-----------------EKFSELGKAATILFTNPNVLLGGMV 230 (402)
T ss_pred chHHHHHHHHHHHHHHHHHHHhccCCCCCccccc-C-C-----------------cchhhHHHHHHHHHcChhHHHHHHH
Confidence 8776666554444444444444444432111110 0 0 0011222344567888888876665
Q ss_pred HHhhhhh-hhhHHHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHH
Q 010744 278 GIVGSLP-WTAMVFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWF 356 (502)
Q Consensus 278 ~~~~~~~-~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (502)
.++.... +...++.|.|++++|++..+.+.+.....++.+++.+..|++.||++||+.. . ..+........ .
T Consensus 231 ~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~-----~-~~~~l~~~~~~-~ 303 (402)
T TIGR00897 231 RIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTV-----R-WFGGVGCGIFT-L 303 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHH-----H-HHHHHHHHHHH-H
Confidence 5554443 4444789999988999999999988888999999999999999999988742 1 11111111111 1
Q ss_pred Hhhhcc-CCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhc
Q 010744 357 LLTAIP-QSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMF 433 (502)
Q Consensus 357 ~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~ 433 (502)
.+...+ ......+...+..++.|++.+...+ ......|.. +++|+++.|+.+...++++.++|.+.|.+.|..+
T Consensus 304 ~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~--~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g 378 (402)
T TIGR00897 304 ALYYIPQHFGHSFAVALIIAIALGIFLAGYVP--LAAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFG 378 (402)
T ss_pred HHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH--HHHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 111111 1111233344566667776665443 345556754 4689999999999999999999999999999853
No 45
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=6.9e-35 Score=279.88 Aligned_cols=347 Identities=23% Similarity=0.329 Sum_probs=262.1
Q ss_pred HHHHHHHHHhhhhchhhHH-HHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHh
Q 010744 47 NLAAIMERADENLLPSVYK-EVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGA 125 (502)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~-~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 125 (502)
+++.++..++.....+.+| .+.+++|.++.+++++.+++.++..+++++.|+++||+|||+++..+.++.+++.++..+
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh
Confidence 5667777888888899999 899999999999999999999999999999999999999999999999999999777777
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHH
Q 010744 126 SQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFIL 205 (502)
Q Consensus 126 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~ 205 (502)
++|++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|.+++|.+++.+.+. .+||+.|++
T Consensus 82 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~-----~~~~~~~~~ 156 (352)
T PF07690_consen 82 ASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISY-----FGWRWAFLI 156 (352)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH-----CHHCCHHHH
T ss_pred hhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhc-----ccccccccc
Confidence 788889999999999999999999999999999999999999999999999999999999999877 899999999
Q ss_pred HHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhh
Q 010744 206 MATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLPW 285 (502)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (502)
.+++.++..++..++.++++..+++.++++++ + ...++..+..+.+++++.+|......+.....+
T Consensus 157 ~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~---~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (352)
T PF07690_consen 157 SAILSLIAAILFILFLPEPPPPRERESPKESE---S-----------KKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVF 222 (352)
T ss_dssp HHHHHHHHHHHHHCCC---STTTT--SSTTTT----------------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHH
T ss_pred ccchhhhhhhhHhhhhhhcccccccccccccc---c-----------ccccccccccccccccchhhhhhhhhhHHHHHH
Confidence 99998888775444444333322222111111 0 000001112445556666653444444443333
Q ss_pred -hhHHHHHHHHHH-hCCC-hhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhcc
Q 010744 286 -TAMVFFTMWFEL-IGFD-HSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIP 362 (502)
Q Consensus 286 -~~~~~~~~~~~~-~g~s-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (502)
....+.|.|+++ +|.+ ..+.+.+.....+.++++.++.+++.||+++|+.. ....... ....+.+....
T Consensus 223 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~----~~~~~~~~~~~ 294 (352)
T PF07690_consen 223 SGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRL----LIAILLL----ILGALGLLLLP 294 (352)
T ss_dssp HHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH----HHHHHHH----HHHHHHHCCSH
T ss_pred HHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH----HHHHHHH----HHHHHHHHHHH
Confidence 344788998654 9999 78999999999999999999999999999986531 1111111 11111111111
Q ss_pred CCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhH
Q 010744 363 QSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAA 422 (502)
Q Consensus 363 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~ 422 (502)
.. ..........++.|++.+...+ ....+..|..|++++|++.|+.+...++++.++|
T Consensus 295 ~~-~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 295 FS-SSPVWLIIALFLIGFGFGIVFP-ILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HH-CHHHHHHHHHHHHHHHHHHHCH-HHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred Hh-hhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 11 1233344566778888887777 7889999999999999999999999999999887
No 46
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=1.9e-34 Score=281.70 Aligned_cols=374 Identities=17% Similarity=0.172 Sum_probs=273.5
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHH
Q 010744 37 LGISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCW 116 (502)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 116 (502)
++++..+..+++..+..+++....++..|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||+++..+.++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 92 (398)
T TIGR00895 13 RYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLF 92 (398)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHH
Confidence 45666777777788888888888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCc
Q 010744 117 AFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGV 196 (502)
Q Consensus 117 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~ 196 (502)
+++.++..++++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~----- 167 (398)
T TIGR00895 93 SVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV----- 167 (398)
T ss_pred HHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhh----------hcCCCcchhHHHhHHHHhhhc
Q 010744 197 PGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVE----------KGNTSVSSVWLESWMATKAVI 266 (502)
Q Consensus 197 ~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~ 266 (502)
.+||+.|++.+++.++..++.+...|+++....++++++.+...++... .+...+....++..+..++..
T Consensus 168 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (398)
T TIGR00895 168 FGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGK 247 (398)
T ss_pred ccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcch
Confidence 8999999998777766666666555554321111111100000000000 000000011111111111111
Q ss_pred chhHHHHHHHHHHhhhhh-hhhHHHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhh
Q 010744 267 KVPTFQIIVLQGIVGSLP-WTAMVFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQF 345 (502)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 345 (502)
+.+..+...+..++.... +....+.|.+.++.|.++.+.+.......++.+++.++.+++.||+++|+. ...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------~~~ 320 (398)
T TIGR00895 248 TARITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVT-------ALL 320 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHH-------HHH
Confidence 122233333333333333 333367887777799999999999999999999999999999999998731 111
Q ss_pred hhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHH
Q 010744 346 SAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLV 425 (502)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~ 425 (502)
....+... ..... ...+ ........++.|++.+...+ ...++..|.+|++.|+++.|+.+.+.++++.++|.+.
T Consensus 321 ~~~~~~~~-~~~~~---~~~~-~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~ 394 (398)
T TIGR00895 321 LLLGAVFA-VLVGS---TLFS-PTLLLLLGAIAGFFVNGGQS-GLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILA 394 (398)
T ss_pred HHHHHHHH-HHHHH---HhhC-HHHHHHHHHHHHHHHHHHHH-HHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 11111111 11111 1112 23344566777888777776 6788999999999999999999999999999999999
Q ss_pred HHH
Q 010744 426 GIL 428 (502)
Q Consensus 426 g~l 428 (502)
|.+
T Consensus 395 G~l 397 (398)
T TIGR00895 395 GYL 397 (398)
T ss_pred Hhc
Confidence 875
No 47
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=5.2e-33 Score=271.26 Aligned_cols=342 Identities=13% Similarity=0.129 Sum_probs=259.5
Q ss_pred HHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHH
Q 010744 50 AIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHF 129 (502)
Q Consensus 50 ~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 129 (502)
..+..+......+.+|.+.+++|.++++.+++.+++.++..++++++|+++||+|||+++..+.++.+++.+++++++++
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 94 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESA 94 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCH
Confidence 44455666778888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHH
Q 010744 130 LHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATL 209 (502)
Q Consensus 130 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~ 209 (502)
+.+++.|+++|++.+...+...+++.|++|++++++..+.......+|..++|.+++++.+. .+||+.|++.+++
T Consensus 95 ~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-----~g~~~~~~~~~~~ 169 (401)
T PRK11043 95 AQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNH-----FGWQAIFATLFAI 169 (401)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CChHHHHHHHHHH
Confidence 99999999999998888888889999999999999999999999999999999999999887 8999999999888
Q ss_pred HHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhh-hhhH
Q 010744 210 SVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLP-WTAM 288 (502)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 288 (502)
.++..++.++++|++++.+++ +.....++++++|.++...+........ +...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (401)
T PRK11043 170 TLLLILPTLRLKPSKKARKQS--------------------------QDALTFKQLLKSKTYLGNVLIFAACSAAFFAWL 223 (401)
T ss_pred HHHHHHHHHHcCCCCCccccc--------------------------hHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHH
Confidence 877776666655543211100 0112344566777766544433333332 3334
Q ss_pred HHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchh
Q 010744 289 VFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNY 368 (502)
Q Consensus 289 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (502)
++.|.+++++|+++.+.++......++.+++.++.+++.||+++|+.. ........++... .........+. .
T Consensus 224 ~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~-~ 296 (401)
T PRK11043 224 TGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLL----PWLLVLFAVSVIA--IWLASLLSHPS-L 296 (401)
T ss_pred HHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH----HHHHHHHHHHHHH--HHHHHHhccCc-H
Confidence 678988888999999999888888888889999999999999887632 1111111111111 11111111222 2
Q ss_pred HHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHH
Q 010744 369 YTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEK 431 (502)
Q Consensus 369 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~ 431 (502)
........+.|++.+...+ .......+..| +++|++.|+.+.....++..++.+.|.+.+.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 297 VPLLIPFCVMAAANGAIYP-IVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 3333445566777776666 45555566566 6799999999999888999999999988774
No 48
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=1e-32 Score=268.41 Aligned_cols=340 Identities=18% Similarity=0.159 Sum_probs=239.6
Q ss_pred HHHHHHHHHHHHHHhhhhchhhHHH-HHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHH
Q 010744 42 SLILINLAAIMERADENLLPSVYKE-VSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFST 120 (502)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 120 (502)
.+..+.++.++.........+.+|. +.+|+|.|.+++|++.+++.+++.++++++|+++||+||||++..+.+...++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~ 95 (392)
T PRK12382 16 SLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAG 95 (392)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHH
Confidence 3444555566666667777788886 578999999999999999999999999999999999999999999988877765
Q ss_pred HHHHh--------hhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhc
Q 010744 121 AAVGA--------SQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQ 192 (502)
Q Consensus 121 ~~~~~--------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~ 192 (502)
+.+.. .+|++.+++.|+++|++.+...+...+++.|++|+|+|++++++.+.+..+|.++||++++.+.+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~- 174 (392)
T PRK12382 96 LAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSH- 174 (392)
T ss_pred HHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 43321 368899999999999999999999999999999999999999999999999999999999999887
Q ss_pred ccCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHH
Q 010744 193 FWGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQ 272 (502)
Q Consensus 193 ~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (502)
.|||+.+.+..+..++.... ..+.|+.+ .++ ++ +.+.++. .+..++ +...
T Consensus 175 ----~g~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~---~~---------------~~~~~~~---~~~~~~-~~~~ 224 (392)
T PRK12382 175 ----FGFAALALTTMVLPLLAWAF---NGTVRKVP-AHA---GE---------------RPSLWSV---VGLIWK-PGLG 224 (392)
T ss_pred ----cChHHHHHHHHHHHHHHHHH---HHhccCCC-CCc---cc---------------CchHHHH---HHHHHH-hHHH
Confidence 89998877655443332222 12111110 000 00 0011111 111111 1111
Q ss_pred HHHHHHHhhhhhh-hhHHHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhh
Q 010744 273 IIVLQGIVGSLPW-TAMVFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGI 351 (502)
Q Consensus 273 ~~~~~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~ 351 (502)
.+.....+ ....+.|.|+++.|++. .+.......++.+++++..|++.||+++|+... .+..+..
T Consensus 225 -----~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~-------~~~~~~~ 290 (392)
T PRK12382 225 -----LALQGVGFAVIGTFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAI-------VSLLVET 290 (392)
T ss_pred -----HHHHHHHHhHHHHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehH-------HHHHHHH
Confidence 11111222 23367788888777653 455666677788889999999999999987421 1111111
Q ss_pred hHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHH
Q 010744 352 PFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEK 431 (502)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~ 431 (502)
... ... .. .++ .+......++.|++.+...+ .......|..|+++||++.|+.+...+++..++|.+.|.+.|.
T Consensus 291 ~~~-~~~-~~--~~~-~~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~ 364 (392)
T PRK12382 291 VGL-LLL-WL--APT-AWVALAGAALTGAGCSLIFP-ALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATS 364 (392)
T ss_pred HHH-HHH-HH--ccc-HHHHHHHHHHHHHHHHhHHH-HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 111 11 122 23344556677777776665 4667778889999999999999999999999999999999998
Q ss_pred h
Q 010744 432 M 432 (502)
Q Consensus 432 ~ 432 (502)
.
T Consensus 365 ~ 365 (392)
T PRK12382 365 F 365 (392)
T ss_pred h
Confidence 4
No 49
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=5.2e-33 Score=268.99 Aligned_cols=342 Identities=15% Similarity=0.101 Sum_probs=250.5
Q ss_pred HHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHH
Q 010744 42 SLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTA 121 (502)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~ 121 (502)
.+..+.++.++...+.....+.+|.+.+++|.|..++|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~ 86 (381)
T PRK03633 7 PVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCA 86 (381)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666677888888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchH
Q 010744 122 AVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRC 201 (502)
Q Consensus 122 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~ 201 (502)
++++++|++.++++|+++|++.+...+...+.+.+..++++|+++++++..+..+|..+|+.+++.+.+. ..|+.
T Consensus 87 ~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~-----~~~~~ 161 (381)
T PRK03633 87 GLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE-----LMSVL 161 (381)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-----ccchH
Confidence 9999999999999999999999999998888888999999999999999999999999999999998764 33333
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhh
Q 010744 202 AFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVG 281 (502)
Q Consensus 202 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (502)
.+ ..+........+ ++...+++. . ++ + +. ++.++.+++|.++......+..
T Consensus 162 ~~-~~~~~~~~~~~~-~~~~~~~~~-~-~~---~---------------~~-------~~~~~~~~~~~~~~~~~~~~~~ 212 (381)
T PRK03633 162 PW-VTGLVLAAILPL-LFTRILNQQ-A-EN---H---------------DS-------TSIWPMLKLRQARLGVNGCIIS 212 (381)
T ss_pred HH-HHHHHHHHHHHH-HHhcccCCC-C-CC---C---------------CC-------CCHHHHHHhcchHHHHHHHHHH
Confidence 32 222222221111 121111110 0 00 0 00 0112244555555443333333
Q ss_pred hhhhhh-HHHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhh
Q 010744 282 SLPWTA-MVFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTA 360 (502)
Q Consensus 282 ~~~~~~-~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (502)
...+.. .+++|.|+++.|.++.+.+...+...++.+++++..|++.||+++|+.. ..+..+..... ....
T Consensus 213 ~~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l-------~~~~~~~~~~~-~~~~- 283 (381)
T PRK03633 213 GIVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVL-------RVQVFVVILGS-IAML- 283 (381)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHH-------HHHHHHHHHHH-HHHh-
Confidence 333333 3678999988999999999999999999999999999999999998632 11111111111 1111
Q ss_pred ccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhc
Q 010744 361 IPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMF 433 (502)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~ 433 (502)
. . .. ......+.|++.....| .....+.|..|+++++...+..+...++|+.++|.+.|.+.|..+
T Consensus 284 -~---~-~~-~~~~~~l~g~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g 349 (381)
T PRK03633 284 -S---Q-AA-MAPALFILGAAGFTLYP-VAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYS 349 (381)
T ss_pred -h---h-HH-HHHHHHHHHHHHHhHHH-HHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 1 1 11 12234445555444455 567777888888888888888888889999999999999999853
No 50
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=1.5e-32 Score=266.73 Aligned_cols=344 Identities=14% Similarity=0.076 Sum_probs=249.8
Q ss_pred HHHHHHHHhhhhchhhH-HHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhh
Q 010744 48 LAAIMERADENLLPSVY-KEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGAS 126 (502)
Q Consensus 48 ~~~~~~~~~~~~~~~~~-~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 126 (502)
...++.........+.+ +.+.+++|++..++|++.+.+.+...+.+++.|+++||+|||+++..+.++.+++.+++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~ 96 (400)
T PRK11646 17 IDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIA 96 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHh
Confidence 33344444434444444 45778999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHH
Q 010744 127 QHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILM 206 (502)
Q Consensus 127 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~ 206 (502)
++++.+++.|+++|++.+...+...+++.|++|+++|++++++......+|..+||.+++++. . .+||+.|++.
T Consensus 97 ~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~-----~g~~~~f~~~ 170 (400)
T PRK11646 97 HEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-Q-----YDFRLVCATG 170 (400)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-----hhHHHHHHHH
Confidence 999999999999999999888999999999999999999999999999999999999999998 4 7999999998
Q ss_pred HHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhh-h
Q 010744 207 ATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLP-W 285 (502)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 285 (502)
++..++..++..+..|+++... .. ++..+..++++++|.++...+..+..... .
T Consensus 171 ~~~~~~~~i~~~~~~~~~~~~~-~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (400)
T PRK11646 171 AVLFVLAAAFNAWLLPAYKLST-VR------------------------TPVREGMTRVLRDKRFVTYVLTLTGYYMLAV 225 (400)
T ss_pred HHHHHHHHHHHHHhCCcccccc-cc------------------------hhhHHHHHHHHcCchHHHHHHHHHHHHHHHH
Confidence 8877776655555444321100 00 01112344566777766554443332222 2
Q ss_pred hhHHHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhh-hhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCC
Q 010744 286 TAMVFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVAD-RISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQS 364 (502)
Q Consensus 286 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (502)
....++|.|+++.+.++.+.+.+.+...+....+....+++.| |++.++. . ..+..+.. ..... ....
T Consensus 226 ~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~------~-~~~~~~~~-~~~~~---l~~~ 294 (400)
T PRK11646 226 QVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHR------L-MAGLLIMS-LSMFP---IGMV 294 (400)
T ss_pred HHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH------H-HHHHHHHH-HHHHH---HHHh
Confidence 2236789999886667788888887777766655555555555 4443331 1 11111111 11111 1111
Q ss_pred cchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcCC
Q 010744 365 VSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFGY 435 (502)
Q Consensus 365 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~ 435 (502)
++ .....+...+.+.+.+...+ ...+++.+..|+++||++.|+.+...+++..+||.+.|.+.|+.+++
T Consensus 295 ~~-~~~~~~~~~l~~~g~~~~~p-~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~ 363 (400)
T PRK11646 295 SN-LQQLFTLICLFYIGSIIAEP-ARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKAL 363 (400)
T ss_pred hh-HHHHHHHHHHHHHHHHHHHc-cHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhc
Confidence 22 22233444556666666666 57788899999999999999999999999999999999999996543
No 51
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=100.00 E-value=1.7e-32 Score=267.01 Aligned_cols=353 Identities=13% Similarity=0.134 Sum_probs=265.7
Q ss_pred hHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHH
Q 010744 39 ISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAF 118 (502)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 118 (502)
.++.+....+..++..+......+.+|.+.+++|.++.+.+++.+.+.+++.++++++|+++||+|||+++..+.++.++
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~ 85 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFIL 85 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHH
Confidence 44555555555666667777888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCccc
Q 010744 119 STAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPG 198 (502)
Q Consensus 119 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~ 198 (502)
+.+++.++++++.+++.|++.|++.+...+....+..|++++++|+++.++...+..+|..++|.+++.+.+. .+
T Consensus 86 ~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-----~g 160 (394)
T PRK11652 86 GTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTL-----FG 160 (394)
T ss_pred HHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cC
Confidence 9999999999999999999999999988888889999999999999999999999999999999999999876 79
Q ss_pred chHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHH
Q 010744 199 WRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQG 278 (502)
Q Consensus 199 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (502)
||+.|++.+++.++..++..+..||+++.++++ ++..+..++.+++|.++...+..
T Consensus 161 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~ 216 (394)
T PRK11652 161 WRACYLFLLLLGAGVTFSMARWMPETRPADARR------------------------TRVLASYRTLLSNRRFNCYLLML 216 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCccCccccch------------------------hHHHHHHHHHHcChHHHHHHHHH
Confidence 999999988877766665555545432211100 11223445567777776655544
Q ss_pred HhhhhhhhhH-HHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHH
Q 010744 279 IVGSLPWTAM-VFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWF 356 (502)
Q Consensus 279 ~~~~~~~~~~-~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (502)
+......... .+.+.++++ +|+++.+.+++.....++.+++..+.+++.||.+++. ..............
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~-- 288 (394)
T PRK11652 217 IGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLM------WQSVICCLLAGLLM-- 288 (394)
T ss_pred HHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHH--
Confidence 4333333333 456777877 8999999999888888888888888899999887332 11111111111111
Q ss_pred HhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHH
Q 010744 357 LLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEK 431 (502)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~ 431 (502)
.........+ .+.......+.+++.+...+ ...++..|..| +++|++.++.+....+++.+++.+.+.+.+.
T Consensus 289 ~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 289 WIPGWFGVMN-VWTLLVPAALFFFGAGMLFP-LATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHhcccc-HHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 1111111112 23344556667777777666 67777788777 6789999999999999999999988877554
No 52
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=2.7e-32 Score=267.06 Aligned_cols=360 Identities=13% Similarity=0.110 Sum_probs=260.5
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHH
Q 010744 37 LGISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCW 116 (502)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 116 (502)
+.....+..+++..+...++....++..|.+++++|+++.+.|++.+.+.+++.+++++.|++.||+|||+++..+.+++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~ 101 (438)
T PRK10133 22 RSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLY 101 (438)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 33455667777888888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH---HhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhc-
Q 010744 117 AFSTAAV---GASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQ- 192 (502)
Q Consensus 117 ~~~~~~~---~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~- 192 (502)
+++.+++ +++++++.++++|+++|+|.+...+..+.++.|+.|+++|.+.+++.+..+.+|..+++.++..+....
T Consensus 102 ~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~ 181 (438)
T PRK10133 102 ALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNV 181 (438)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999886 468899999999999999999999999999999887777777899999999999999999987654110
Q ss_pred c------------cC--------cccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcc
Q 010744 193 F------------WG--------VPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVS 252 (502)
Q Consensus 193 ~------------~~--------~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (502)
+ .. ..+||++|+....+..+..++..+ .+.|+.+.++. + + ++.
T Consensus 182 ~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~-~~~p~~~~~~~-~-----~----------~~~ 244 (438)
T PRK10133 182 PHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIML-TKFPALQSDNH-S-----D----------AKQ 244 (438)
T ss_pred cccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCCCcccc-c-----c----------ccc
Confidence 0 00 025677776544333322222221 12121110000 0 0 000
Q ss_pred hhHHHhHHHHhhhcchhHHHHHHHHHHhhhhh-hhhHHHHHHHH-HH-hCCChhhHHHHHHHHHhhhcccccchhhhhhh
Q 010744 253 SVWLESWMATKAVIKVPTFQIIVLQGIVGSLP-WTAMVFFTMWF-EL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADR 329 (502)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 329 (502)
.+..+..++++++|.++...+..++.... .....|.+.|+ ++ +|+++.+++..+....++.++++++++++.||
T Consensus 245 ---~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r 321 (438)
T PRK10133 245 ---GSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISR 321 (438)
T ss_pred ---cchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01123344577788877665554444443 33346788775 55 89999999999999999999999999999999
Q ss_pred hccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHH
Q 010744 330 ISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAF 409 (502)
Q Consensus 330 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~ 409 (502)
+++|+.. ..+..++.....+. ...+ ..+ ....+.+.|++.+...| ..++...+..|+ +.+++.++
T Consensus 322 ~g~~~~l-------~~~~~~~~~~~~~~-~~~~---~~~--~~~~~~l~glg~~~i~P-~~~s~a~~~~~~-~~~~as~l 386 (438)
T PRK10133 322 FAPHKVL-------AAYALIAMALCLIS-AFAG---GHV--GLIALTLCSAFMSIQYP-TIFSLGIKNLGQ-DTKYGSSF 386 (438)
T ss_pred cCHHHHH-------HHHHHHHHHHHHHH-HHcC---ChH--HHHHHHHHHHHHHHHHH-HHHHHHHcccch-hhccchhH
Confidence 9998742 11122211111111 1111 111 23456678888888888 678888887764 56788888
Q ss_pred HHHhhhhhhhhhHHHHHHHHHHh
Q 010744 410 DRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 410 ~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
.. ....++.++|.+.|.+.|..
T Consensus 387 ~~-~~~~g~~~~~~i~G~l~~~~ 408 (438)
T PRK10133 387 IV-MTIIGGGIVTPVMGFVSDAA 408 (438)
T ss_pred Hh-HHhccchHHHHHHHHHHHhc
Confidence 86 45578889999999999985
No 53
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=3.6e-32 Score=263.29 Aligned_cols=345 Identities=14% Similarity=0.080 Sum_probs=251.1
Q ss_pred HHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHH
Q 010744 45 LINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVG 124 (502)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~ 124 (502)
.++++.++..+.........+.+.+|++.+..+.+++.+.+.+++.+.++++|+++||+|||++++.+.++++++.++++
T Consensus 7 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~ 86 (393)
T PRK11195 7 AIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLML 86 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHH
Confidence 34566666666555556666677899999999999999999999999999999999999999999999999999998888
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHH
Q 010744 125 ASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFI 204 (502)
Q Consensus 125 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~ 204 (502)
++++. ++.|+++|++.+...|+..+++.|++|+++|++++++.+....+|.++||.+++++.+. .|+..+.
T Consensus 87 ~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~------~~~~~~~ 157 (393)
T PRK11195 87 FGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP------HAEAALA 157 (393)
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHH
Confidence 87764 77899999999999999999999999999999999999999999999999999999885 4888887
Q ss_pred HHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhh
Q 010744 205 LMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLP 284 (502)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (502)
+.+...++..+.. +..|+++...++. + .+. ....++..+..+.++++|.+........+....
T Consensus 158 i~~~~~~~~~~~~-~~l~~~~~~~~~~-~----~~~-----------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 220 (393)
T PRK11195 158 VCALIYLLAALFN-LFIPRLGARRPGQ-S----WNP-----------IALLRDFFHACRVLWRDKLGRFSLAGTTLFWGA 220 (393)
T ss_pred HHHHHHHHHHHHH-hcCCCCccccccc-C----CCH-----------HHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHH
Confidence 7765544443333 3334332111110 0 000 011122233445667777766554443333333
Q ss_pred hhhH-HHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhcc
Q 010744 285 WTAM-VFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIP 362 (502)
Q Consensus 285 ~~~~-~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (502)
.... ...|.|+++ +|.++.+.|++.....++.+++.+..+++.||.++++.. ..+..++... . . ..
T Consensus 221 ~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~-------~~g~~~~~~~--~-~--~~ 288 (393)
T PRK11195 221 GATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVL-------PAGILMGLVV--L-L--MA 288 (393)
T ss_pred HHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchH-------HHHHHHHHHH--H-H--HH
Confidence 2233 456778876 899999999999999999999999999999988776531 1111111111 1 1 11
Q ss_pred CCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCc-hhhHHHHHHHhhhhhhhhhHHHHHHHH
Q 010744 363 QSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKH-RTMIYAFDRAFEGSFSSFAAPLVGILS 429 (502)
Q Consensus 363 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~-~~~~~g~~~~~~~~~~~~~~~~~g~l~ 429 (502)
..++ .+......++.|++.+...+ ...+..++..|++. +|++.++.+...+++..++..+.+.+.
T Consensus 289 ~~~~-~~~~~~~~~~~G~~~g~~~~-~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~ 354 (393)
T PRK11195 289 LQHS-LLPAYPLLILIGALGGFFVV-PMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLV 354 (393)
T ss_pred HHhH-HHHHHHHHHHHHHhhhhhhh-hHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 1222 33344566677887777666 46677788666554 799999999999999999999988663
No 54
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=6.3e-32 Score=264.65 Aligned_cols=348 Identities=15% Similarity=0.164 Sum_probs=255.9
Q ss_pred HHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCC-----chHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHH
Q 010744 43 LILINLAAIMERADENLLPSVYKEVSEAFNAGPSD-----LGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWA 117 (502)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~-----~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 117 (502)
...++++.++.........+.+|.+.+++|.+..+ .|++.+++.++..++++++|+++||+|||+++..+.++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 95 (408)
T PRK09874 16 LTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMG 95 (408)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHH
Confidence 44556667777777788889999999999998765 3889999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcc
Q 010744 118 FSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVP 197 (502)
Q Consensus 118 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~ 197 (502)
++.++++++++++.+++.|++.|++.+ ..+....++.+++|+++|++++++...+..+|.+++|.+++.+.+. .
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----~ 169 (408)
T PRK09874 96 IVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADS-----Y 169 (408)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----h
Confidence 999999999999999999999999854 5677888999999999999999999999999999999999999887 8
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHH-H
Q 010744 198 GWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIV-L 276 (502)
Q Consensus 198 ~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 276 (502)
+||+.|++.+++.++..+..++..++++...+++ + +.+.+ +..+.++++.++... .
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---------------~~~~~----~~~~~~~~~~~~~~~~~ 226 (408)
T PRK09874 170 GLRPVFFITASVLFLCFLVTLFCIRENFQPVSKK----E---------------MLHMR----EVVTSLKNPKLVLSLFV 226 (408)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhccCcccccch----h---------------hhHHH----HHHHhCcCCchHHHHHH
Confidence 9999999999888777777666666543211110 0 00011 112244555554332 2
Q ss_pred HHHhhhhhhhh-HHHHHHHHHHhCCChh----hHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhh
Q 010744 277 QGIVGSLPWTA-MVFFTMWFELIGFDHS----STAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGI 351 (502)
Q Consensus 277 ~~~~~~~~~~~-~~~~~~~~~~~g~s~~----~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~ 351 (502)
..+........ ..+.|.|.++.+.+.. ..+.+.....++.+++.+..|++.||+++|+.. ..+..+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~-------~~~~~~~~ 299 (408)
T PRK09874 227 TTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKIL-------ITALIFSV 299 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhH-------HHHHHHHH
Confidence 22222222222 2567778776433322 245555666778888889999999999998742 11111111
Q ss_pred hHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHH
Q 010744 352 PFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEK 431 (502)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~ 431 (502)
... +. ....++ .+...+..++.|++.+...+ ...+...+..|++.+|+..++.+.+.+++..++|.+.|.+.+.
T Consensus 300 ~~~-~~---~~~~~~-~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~ 373 (408)
T PRK09874 300 LLL-IP---MSFVQT-PLQLGILRFLLGAADGALLP-AVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISAN 373 (408)
T ss_pred HHH-HH---HHHhcc-HHHHHHHHHHHHhhhHhhHH-HHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhh
Confidence 111 11 111122 23344566677877777666 5667777888989999999999999999999999999999987
Q ss_pred h
Q 010744 432 M 432 (502)
Q Consensus 432 ~ 432 (502)
.
T Consensus 374 ~ 374 (408)
T PRK09874 374 Y 374 (408)
T ss_pred c
Confidence 4
No 55
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.8e-33 Score=268.51 Aligned_cols=347 Identities=17% Similarity=0.202 Sum_probs=261.3
Q ss_pred HhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhH--HHHHHHHHHHHhhhhhh
Q 010744 68 SEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQH--FLHVGMWRAVNGFGLAI 145 (502)
Q Consensus 68 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~~~l~~~r~l~G~~~~~ 145 (502)
..+++++..|.+++.+.+..|+.+++++.|+++||+|.|+++..+.++.++++++..++.+ ++.+++.|++||++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 3478899999999999999999999999999999999999999999999999999998754 45779999999999999
Q ss_pred hhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHHHhccCCc
Q 010744 146 VIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVLVFVVDPR 225 (502)
Q Consensus 146 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~ 225 (502)
.+|+...+.++|.|++||++..++...+..+|.+++-++++++.+. ..||+++|++.++++++..++++++..|.+
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s----~~GW~sifY~~g~~g~i~~~~w~~~~~d~P 220 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES----SLGWPSIFYVFGIVGLIWFILWFLFYSDSP 220 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc----CCCCchHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 9999999999999999999999999999999999999999999875 379999999999999999999888887766
Q ss_pred cccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhhhhH-HHHHHHHHH-hCCChh
Q 010744 226 KKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLPWTAM-VFFTMWFEL-IGFDHS 303 (502)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~g~s~~ 303 (502)
.+++.-.++|.++..++.......+. ...+++++++++.+|.+.+..+.....+..+ .|+|.|+++ +|++..
T Consensus 221 ~~h~~is~~El~~I~~~k~~~~~~~~------~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~ 294 (466)
T KOG2532|consen 221 SKHPNISEKELKYIEKGKSEAHVKKK------PPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVR 294 (466)
T ss_pred ccCCCCCHHHHHHHHhcccccccCCC------CCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChh
Confidence 55444333333333222211111110 2235667889999999988888766655444 899999998 999999
Q ss_pred hHHHHHHHHHhhhcccccchhhhhhhhccccCCc---chhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHH
Q 010744 304 STAALLSLFAIGCAVGSFLGGVVADRISQAYPHS---GRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGL 380 (502)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 380 (502)
+.|++.++..+...+..+++|.++||..+| ... .|.....++.. ...+.+......+.......+.++.+..
T Consensus 295 ~~G~~salP~l~~~~~k~~~g~lsD~l~~~-~ls~t~~rkifn~i~~~----~~ai~l~~l~~~~~~~~~~a~~~l~~~~ 369 (466)
T KOG2532|consen 295 ETGFLSALPFLAMAIVKFVAGQLSDRLTFR-ILSETTVRKIFNTIAFG----GPAVFLLVLAFTSDEHRLLAVILLTIAI 369 (466)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCchHhHHHHHHhHHHH----HHHHHHHeeeecCCCcchHHHHHHHHHH
Confidence 999999999999999999999999999876 221 22223222222 2222222222222111112222223333
Q ss_pred HHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHH
Q 010744 381 TISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSE 430 (502)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~ 430 (502)
+......+-.+.-..+. .+++.+..+|+.+.+..+.+.++|.+.|.+..
T Consensus 370 ~~~g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~ 418 (466)
T KOG2532|consen 370 GLSGFNISGFYKNHQDI-APQHAGFVMGIINFVGALAGFIAPLLVGIIVT 418 (466)
T ss_pred HHcccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHheeeEeC
Confidence 33222221122222332 45889999999999999999999999999884
No 56
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=3.8e-32 Score=263.22 Aligned_cols=341 Identities=15% Similarity=0.084 Sum_probs=249.0
Q ss_pred HHHHHHHHhhhhchhhHHH-HHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHH-HHHHHHHHHHHHHHh
Q 010744 48 LAAIMERADENLLPSVYKE-VSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLT-IGILCWAFSTAAVGA 125 (502)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~-~~~~~~~~~~~~~~~ 125 (502)
+.+++..+......+.+|. +.+++|.++.++|++.+++.+...+.+++.|+++||+||||.++ .+.++.+++.+++++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 83 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW 83 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh
Confidence 3456666777777788776 56889999999999999999999999999999999999998755 566666778888899
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchh--hhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHH
Q 010744 126 SQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAG--FGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAF 203 (502)
Q Consensus 126 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f 203 (502)
++|++.+++.|+++|.+.+...|...+++.|+.|+++|++. .+....+.++|.++|+.+++.+.+. .+||+.|
T Consensus 84 ~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~-----~~~~~~f 158 (375)
T TIGR00899 84 NRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALG-----FGFTVMF 158 (375)
T ss_pred cchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHh-----cccHHHH
Confidence 99999999999999988888889888999999887777755 6888888999999999999999887 8999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhh
Q 010744 204 ILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSL 283 (502)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (502)
++.+++.++..++.++..||++...++. ++ + .+.++.++++.++......+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---------------~-------~~~~~~~~~~~~~~~~~~~~~~~~ 213 (375)
T TIGR00899 159 LTAALAFVLCGVLVWLFLPSYPRGAPGA---LT---------------R-------LEVRGLLASRDTRLLFVACTLMWG 213 (375)
T ss_pred HHHHHHHHHHHHHHHHhCCCcccCcccc---cC---------------c-------chhhhhhcCcchHHHHHHHHHHHH
Confidence 9999887777777666555433211110 00 0 001123445555544443333333
Q ss_pred hhhh-HHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhc
Q 010744 284 PWTA-MVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAI 361 (502)
Q Consensus 284 ~~~~-~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (502)
.... ..+.|.++++ +|.++.+.+.+........+++.++.|++.||+++|+.. ..+........ .. .
T Consensus 214 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~-------~~~~~~~~~~~-~~---~ 282 (375)
T TIGR00899 214 CNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLM-------LLAALAGVAFY-TG---L 282 (375)
T ss_pred HHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHH-------HHHHHHHHHHH-HH---H
Confidence 2222 3567888765 899999999888777777788889999999999998732 11111111111 11 1
Q ss_pred cCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 362 PQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 362 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
...++ .+.......+.|++.+...+ ....+..|..|+ +++++.++.+...+++..++|.+.|.+.|..
T Consensus 283 ~~~~~-~~~~~~~~~~~g~~~g~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~ 350 (375)
T TIGR00899 283 AADNS-LWALLMLQLLNAIFIGILAG-IGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERW 350 (375)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11122 23344455566766666555 566778888775 5679999999999999999999999999874
No 57
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=2.4e-33 Score=282.04 Aligned_cols=346 Identities=14% Similarity=0.077 Sum_probs=247.5
Q ss_pred hhHHHHHhhcCCC---CCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 010744 62 SVYKEVSEAFNAG---PSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAV 138 (502)
Q Consensus 62 ~~~~~i~~~~~~s---~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 138 (502)
+..|.+.+|+|++ ..+.+++.+++.++..+++++.|+++||+|||++++++.++.+++.+++++++|++.+++.|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 5678899999998 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHH
Q 010744 139 NGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVL 218 (502)
Q Consensus 139 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~ 218 (502)
.|++.+...+....++.|++|+++|+++.++...+..+|.++++.+++.+ .+||+.|++.+++.++..+..+
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~--------~~wr~~~~~~~i~~~~~~~~~~ 261 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFI--------PDWRWLQLAVSLPTFLFFLLSW 261 (505)
T ss_pred HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988665 3599999999998888777777
Q ss_pred HhccCCccccCCCCCCCCCCchhhHhhhcCCCcc---------hhH--HHhHHHHhhhcchhHHHHHHHHHHhhhhhhhh
Q 010744 219 VFVVDPRKKASTFHGTGENFDRDELVEKGNTSVS---------SVW--LESWMATKAVIKVPTFQIIVLQGIVGSLPWTA 287 (502)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (502)
+++|+|++...+++.+++....++..+.+..... ... +......++++++|.++...+.....++....
T Consensus 262 ~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 341 (505)
T TIGR00898 262 FVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAF 341 (505)
T ss_pred hcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 7777776654443222221111111110000000 000 00012345677888877766655444443333
Q ss_pred HHH-HHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcc
Q 010744 288 MVF-FTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVS 366 (502)
Q Consensus 288 ~~~-~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (502)
..+ ++.+..+.+.+... .....++..+++.++.+++.||+|||+.. ..+.++..... +.+...+. ..
T Consensus 342 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~~~~~~l~dr~grr~~~-------~~~~~~~~~~~-l~~~~~~~-~~ 409 (505)
T TIGR00898 342 SYYGLVLDLGNLGGNIYL---DLFISGLVELPAKLITLLLIDRLGRRYTM-------AASLLLAGVAL-LLLLFVPV-DL 409 (505)
T ss_pred HHHHHhccccccCCChHH---HHHHHHHHHHHHHHHHHHHHHHhCCHHHH-------HHHHHHHHHHH-HHHHHcCC-Cc
Confidence 333 34444556655433 33345677788889999999999998742 11121111111 11111121 11
Q ss_pred hhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHH
Q 010744 367 NYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSE 430 (502)
Q Consensus 367 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~ 430 (502)
.+......++.+++.+...+ ..+.+..|.+|++.|+++.|+.+....+|+.++|.+.+ +.+
T Consensus 410 -~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~ 470 (505)
T TIGR00898 410 -YFLRTALAVLGKFGITSAFQ-MVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGE 470 (505)
T ss_pred -hHHHHHHHHHHHHHHHHHHH-HHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH
Confidence 12233344444555555555 57888999999999999999999999999999999998 443
No 58
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=7.3e-32 Score=262.37 Aligned_cols=343 Identities=14% Similarity=0.087 Sum_probs=243.1
Q ss_pred HHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHH
Q 010744 45 LINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVG 124 (502)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~ 124 (502)
...+..+......+...+.+|.+.+++|.+..+.++..+.+.++..+++++.|+++||+|||+++..+.++.+++.+++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~ 86 (392)
T PRK10473 7 CSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCS 86 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 33444445555555666889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHH
Q 010744 125 ASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFI 204 (502)
Q Consensus 125 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~ 204 (502)
++++++.+++.|+++|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+. .+||+.|+
T Consensus 87 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~-----~g~~~~~~ 161 (392)
T PRK10473 87 LAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLK-----FPWQSLFY 161 (392)
T ss_pred HhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----cChHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999988776 79999999
Q ss_pred HHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhh-
Q 010744 205 LMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSL- 283 (502)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 283 (502)
+.+++.++..++.++..+|++...++. + .+..+..++.++++.++...+.......
T Consensus 162 ~~~~~~~i~~~~~~~~~~~~~~~~~~~----~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (392)
T PRK10473 162 TMAAMGILVLLLSLFILKETRPARAPA----A-------------------SSKPRENSESLLNRFFLSRLVITTLSVTV 218 (392)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCcccCC----c-------------------cchHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 999888887777666555543211100 0 0001122345566666554443333222
Q ss_pred hhhhHHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhcc
Q 010744 284 PWTAMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIP 362 (502)
Q Consensus 284 ~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (502)
......+.|.++++ +|+++.+.+...+...++.+++.++.+++.||+++|+.. ..+..+......... ..
T Consensus 219 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~-------~~~~~~~~~~~~~~~--~~ 289 (392)
T PRK10473 219 ILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLM-------LTSQVLFLAAGITLA--LS 289 (392)
T ss_pred HHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH-------HHHHHHHHHHHHHHH--HH
Confidence 22233556777765 899999999999999999999999999999999988732 111111111111111 11
Q ss_pred CCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhc
Q 010744 363 QSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMF 433 (502)
Q Consensus 363 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~ 433 (502)
. ..............|++.+ .+ .....+..|.++|+ |.......++..+++.+.+++.+..+
T Consensus 290 ~-~~~~~~~~~~l~~~g~~~~--~~---~~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g 351 (392)
T PRK10473 290 P-SHAVSLFGITLICAGFSVG--FG---VAMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLG 351 (392)
T ss_pred H-HHHHHHHHHHHHHHHHHHH--hH---HHHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1 1112222223333333333 22 22334445544443 34444456677788888888888753
No 59
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=100.00 E-value=1.4e-31 Score=259.33 Aligned_cols=334 Identities=11% Similarity=0.108 Sum_probs=242.2
Q ss_pred hhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 010744 56 DENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMW 135 (502)
Q Consensus 56 ~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 135 (502)
......+.+|.+.+++|+++++.+++.+++.++..++++++|+++||+|||+++..+.++.+++.+++.++++++.+++.
T Consensus 6 ~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 85 (377)
T PRK11102 6 AIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYM 85 (377)
T ss_pred HHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 33566789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHH
Q 010744 136 RAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAF 215 (502)
Q Consensus 136 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~ 215 (502)
|+++|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+. .+||+.|++.+++.++..+
T Consensus 86 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~ 160 (377)
T PRK11102 86 RFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVW-----FSWHAIFWVLALAAILAAA 160 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999887 8999999999888877776
Q ss_pred HHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhh-hhHHHHHHH
Q 010744 216 LVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLPW-TAMVFFTMW 294 (502)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 294 (502)
+..+..||++..++++ + .+.++..+..++.++++.++...+...+..... ....+.|.+
T Consensus 161 ~~~~~~~~~~~~~~~~-----~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (377)
T PRK11102 161 LVFFFIPETLPKERRQ-----P---------------FHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFV 220 (377)
T ss_pred HHHHhCCccCcccccC-----C---------------CChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHH
Confidence 6665555432211110 0 001122334456777777766555544433332 223556766
Q ss_pred HHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHH
Q 010744 295 FEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAV 373 (502)
Q Consensus 295 ~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (502)
+.+ +|+++.+.+.+.....++.+++.++.+++.||+++|+.. ..+..+.......... ....+...+...+
T Consensus 221 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~-------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 292 (377)
T PRK11102 221 YIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNML-------RFGLWIQFIMGIWLVV-SALLDLGFWALVV 292 (377)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH-------HHHHHHHHHHHHHHHH-HHHHhhhHHHHHH
Confidence 665 899999999999999999999999999999999998742 1111111111111111 1101111222222
Q ss_pred HHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhh-hhhhhHHH
Q 010744 374 TLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGS-FSSFAAPL 424 (502)
Q Consensus 374 ~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-~~~~~~~~ 424 (502)
...+.+.+.+.... .......|..| +.++++.++.+..... +..+++.+
T Consensus 293 ~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~ 342 (377)
T PRK11102 293 GVAAFVGCVSMISS-NAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALL 342 (377)
T ss_pred HHHHHHHHHHHhhH-HHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333 34456677666 7899999998776543 33344443
No 60
>PRK10054 putative transporter; Provisional
Probab=100.00 E-value=2.7e-31 Score=257.45 Aligned_cols=345 Identities=12% Similarity=0.114 Sum_probs=252.5
Q ss_pred HHHHHHHHHHhhhhchhhHH-HHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHH
Q 010744 46 INLAAIMERADENLLPSVYK-EVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVG 124 (502)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~-~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~ 124 (502)
+.+..++.........+.+| .+.+++|++..++|++.+.+.++..+++++.|+++||+|||++++++.++.+++.++.+
T Consensus 12 l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~ 91 (395)
T PRK10054 12 LLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIP 91 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHH
Confidence 33445555555555555554 56678999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHH
Q 010744 125 ASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFI 204 (502)
Q Consensus 125 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~ 204 (502)
++++++.+++.|++.|.+.+...+...++..|.+|+++|++++++.....++|.++||.+++++.+ .+||.+|+
T Consensus 92 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~------~g~~~~f~ 165 (395)
T PRK10054 92 LVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM------QSINLPFW 165 (395)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------hccCcHHH
Confidence 999999999999999988888888899999999999999999999999999999999999998875 58999999
Q ss_pred HHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhh
Q 010744 205 LMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLP 284 (502)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (502)
+.+++.++..++..+..++++..++++ + +. ..+.++.+++|.++......++....
T Consensus 166 ~~~~~~~i~~i~~~~~~~~~~~~~~~~----~---------------~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~ 221 (395)
T PRK10054 166 LAAICSAFPLVFIQIWVQRSEKAIATE----T---------------GS-----VWSPSVLLQDKALLWFTCSGFLASFV 221 (395)
T ss_pred HHHHHHHHHHHHHHHHHhccccccccc----h---------------hh-----hhhhhhhccCceehHHHHHHHHHHHH
Confidence 988877776555544433322111100 0 00 01124567778877666555554443
Q ss_pred hhhH-HHHHHHHH---HhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhh
Q 010744 285 WTAM-VFFTMWFE---LIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTA 360 (502)
Q Consensus 285 ~~~~-~~~~~~~~---~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (502)
+... .+.+.|.. +.+.+....+.+.....+.........+++.||.++|+.. ..+..+.. .....+ .
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l-------~~~~~~~~-~~~~~~-~ 292 (395)
T PRK10054 222 SGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLM-------TAGTLCFV-IGLVGF-I 292 (395)
T ss_pred HHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHH-------HHHHHHHH-HHHHHH-H
Confidence 3333 45566653 3566666778887777777777788889999999888631 11111111 111111 1
Q ss_pred ccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhc
Q 010744 361 IPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMF 433 (502)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~ 433 (502)
.. .+..+...+...+.+++.+...+ ...+.+.+..|++.++++.+..+ ...+|..+||.++|.+.|+.+
T Consensus 293 ~~--~~~~~~~~~~~~~~~~g~~~~~p-~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g 361 (395)
T PRK10054 293 FS--GNSLLLWGMSAAVFTVGEIIYAP-GEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLP 361 (395)
T ss_pred Hc--chHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcC
Confidence 11 12233344556677777776666 56788889999999999998765 667899999999999999963
No 61
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=100.00 E-value=1e-31 Score=259.22 Aligned_cols=353 Identities=15% Similarity=0.145 Sum_probs=246.6
Q ss_pred HHHHHHHHHHHHhhhhchhhHHH-HHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHH
Q 010744 44 ILINLAAIMERADENLLPSVYKE-VSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAA 122 (502)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 122 (502)
...+++.++...+....++..|. +.+++|+++.+.+++.+++.+++.+++++.|+++||+|||+++.++.++.+++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~ 83 (366)
T TIGR00886 4 FFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLW 83 (366)
T ss_pred HHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 34666777777788889999995 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhh-HHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcc-----cCc
Q 010744 123 VGASQ-HFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQF-----WGV 196 (502)
Q Consensus 123 ~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~-----~~~ 196 (502)
+++++ +++.+++.|+++|++.+ ..+....++.|++|+++|++++++......+|..+++.+++.+..... ...
T Consensus 84 ~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~ 162 (366)
T TIGR00886 84 AGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAH 162 (366)
T ss_pred HHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 99999 99999999999999855 456678999999999999999999998888888888888776654210 012
Q ss_pred ccchHHH-HHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHH
Q 010744 197 PGWRCAF-ILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIV 275 (502)
Q Consensus 197 ~~wr~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (502)
.+||+.| +..+++..+..++.+...++.+...+++++ .+....+ ...+ ++..+..++.+++|.++...
T Consensus 163 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-----~~~~----~~~~~~~~~~~~~~~~~~~~ 231 (366)
T TIGR00886 163 LAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGK--LSFKGAR-----WSVG----TGALGDQLKVFRDRHTWILA 231 (366)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchh--ccccccc-----cccc----chhHHHHHHHHhccchhhHH
Confidence 5899999 444555555555544444332221111100 0000000 0000 01112334466777777666
Q ss_pred HHHHhhhhhh-hhHHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhH
Q 010744 276 LQGIVGSLPW-TAMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPF 353 (502)
Q Consensus 276 ~~~~~~~~~~-~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 353 (502)
+..+...... ...++.|.|+++ +|+++.+++.+.....+.+++++++.|++.||+++|+.. ... .......
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~-----~~~--~~~~~~~ 304 (366)
T TIGR00886 232 LLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKL-----LMS--FLGVAMG 304 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhH-----HHH--HHHHHHH
Confidence 6555544443 334788999987 899999999999999999999999999999999998632 111 1111111
Q ss_pred HHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhh
Q 010744 354 SWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFS 418 (502)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~ 418 (502)
. ..+......+.............++..+.... .......+..| +++|+++|+.+.++++|+
T Consensus 305 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~ 366 (366)
T TIGR00886 305 A-FLVVLGLVSPLSLAVFIVLFVALFFFSGAGNG-STFALVPHIFR-RATGAVSGLVGAIGNLGG 366 (366)
T ss_pred H-HHHHhcCCCcchHHHHHHHHHHHHHHhccccc-hhhhcchhhch-hhcccHHHHHHHhccCCC
Confidence 1 11111111111233333444445555555555 56777788777 799999999999888763
No 62
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.3e-31 Score=250.36 Aligned_cols=387 Identities=13% Similarity=0.059 Sum_probs=270.9
Q ss_pred HHHHHHHHHHHHHHHhhhhchhhHHHHH--------hhcCC--CCCC----chHHHHHHHHHHhhhcchhhhhhhhcCCc
Q 010744 41 LSLILINLAAIMERADENLLPSVYKEVS--------EAFNA--GPSD----LGYLTFIRNFVQGLSSPLAGVLVINYDRP 106 (502)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~--------~~~~~--s~~~----~g~~~s~~~~~~~~~~~~~G~l~dr~Grr 106 (502)
.......++.+-.++....+++..+.+. +.+|. +.++ .+.+.+++.+|.++|++..|+++||+|||
T Consensus 11 ~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK 90 (485)
T KOG0569|consen 11 LAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRK 90 (485)
T ss_pred HHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch
Confidence 3444445555656666666666554433 34553 3332 56778999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHH
Q 010744 107 AVLTIGILCWAFSTAAVGA---SQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGV 183 (502)
Q Consensus 107 ~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~ 183 (502)
..+.++.++..++.++..+ .+++.+++++|++.|+..+......+.++.|..|.+.||......+.+..+|.+++..
T Consensus 91 ~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~ 170 (485)
T KOG0569|consen 91 NALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQV 170 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888887776 4789999999999999999999999999999999999999999999999999999977
Q ss_pred HHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHHHhccCCccccC-CCCCCCCCCchhhHhhhcCCCc-----------
Q 010744 184 LATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKAS-TFHGTGENFDRDELVEKGNTSV----------- 251 (502)
Q Consensus 184 ~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----------- 251 (502)
++..-.- +++..|++.+....+++++..++..++||+|++.-. ++++++++...+.....+..+.
T Consensus 171 ~~l~~il---Gt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~ 247 (485)
T KOG0569|consen 171 LGLPSLL---GTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEE 247 (485)
T ss_pred HccHHhc---CCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHH
Confidence 7643221 233679999999999999999999999999998765 3433332221111111000000
Q ss_pred chhHHHhHHHHhhhcchhHHHHH-----HHHHHhhhh-hhhhHHHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhh
Q 010744 252 SSVWLESWMATKAVIKVPTFQII-----VLQGIVGSL-PWTAMVFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGV 325 (502)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~ 325 (502)
++..++...+.+++++++..+.- .+....... ......|...++++.|++..++.+.....++..++..+++.+
T Consensus 248 ~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~ 327 (485)
T KOG0569|consen 248 EELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPF 327 (485)
T ss_pred hccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000011123345555443332 222222222 233346778888899999999999999999999999999999
Q ss_pred hhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCC-cchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchh
Q 010744 326 VADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQS-VSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRT 404 (502)
Q Consensus 326 l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~ 404 (502)
+.||+|||+.+. .....+.+...+..+........ +...+..+.+.+++.++.+....|+.+-+.+|++|++.|+
T Consensus 328 lid~~gRRpLll----~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~ 403 (485)
T KOG0569|consen 328 LIDRLGRRPLLL----ISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARS 403 (485)
T ss_pred HHHhcCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchH
Confidence 999999998431 11111111111111111111111 1112223455666666666666668899999999999999
Q ss_pred hHHHHHHHhhhhhhhhhHHHHHHHHHHhcC
Q 010744 405 MIYAFDRAFEGSFSSFAAPLVGILSEKMFG 434 (502)
Q Consensus 405 ~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~ 434 (502)
.+.++...+..+...+-......+.+..|+
T Consensus 404 aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~ 433 (485)
T KOG0569|consen 404 AAQSVATAVNWLSNFIVGFAFPPLQNVIGP 433 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999998764
No 63
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.9e-32 Score=262.72 Aligned_cols=385 Identities=15% Similarity=0.199 Sum_probs=301.3
Q ss_pred ccchhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHH
Q 010744 35 KVLGISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGIL 114 (502)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 114 (502)
...+.|.+++..++......-....++.+.+.+.++++-+.++++|+.++......+..|+.+.+.||+|.|.+.+.|.+
T Consensus 40 dGG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~ 119 (509)
T KOG2504|consen 40 DGGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGL 119 (509)
T ss_pred CCCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHH
Confidence 45677888888888887777777788899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhHHHHHHH-HHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcc
Q 010744 115 CWAFSTAAVGASQHFLHVGM-WRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQF 193 (502)
Q Consensus 115 ~~~~~~~~~~~~~~~~~l~~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~ 193 (502)
+.+++.++.+|++++|++++ .-++.|+|.+..+......+..|| +|+|+.+.|+...+.++|.++-|.+...+.+.
T Consensus 120 v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~-- 196 (509)
T KOG2504|consen 120 VAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSK-- 196 (509)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHH--
Confidence 99999999999999998765 589999999999999999999988 89999999999999999999999999999988
Q ss_pred cCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCC---------------------CCCCCCCCch-----hhHhhhc
Q 010744 194 WGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKAST---------------------FHGTGENFDR-----DELVEKG 247 (502)
Q Consensus 194 ~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~-----~~~~~~~ 247 (502)
.|||+.+++.+.+.+-..+......|.+....+. ...++..... ......+
T Consensus 197 ---~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (509)
T KOG2504|consen 197 ---YGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKR 273 (509)
T ss_pred ---hCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhh
Confidence 9999999999999877777777666532221111 0000000000 0000000
Q ss_pred CCCcchhHHHhHHH---HhhhcchhHHHHHHHHHHhhhhhhhhH-HHHHHHHHHhCCChhhHHHHHHHHHhhhcccccch
Q 010744 248 NTSVSSVWLESWMA---TKAVIKVPTFQIIVLQGIVGSLPWTAM-VFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLG 323 (502)
Q Consensus 248 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~ 323 (502)
.+++.....+.... ..++++++.++.+.+...+....+... .++|.|.+++|++..+++.+.++.++..++++++.
T Consensus 274 ~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~ 353 (509)
T KOG2504|consen 274 GPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIIL 353 (509)
T ss_pred CCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhh
Confidence 00000100111111 147889999999988888877766665 78999999999999999999999999999999999
Q ss_pred hhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCch
Q 010744 324 GVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHR 403 (502)
Q Consensus 324 g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~ 403 (502)
|+++|+...++. .+..++++ ...+.....+...+ ...+.....++|+..+.... .....+.|+.+.++-
T Consensus 354 G~laD~~~~~~~-----~~~~~~ll----~~gl~~~~~p~~~~-~~~l~~~~~~fG~~~g~~~~-l~~~i~~~~~g~~~l 422 (509)
T KOG2504|consen 354 GLLADKPGIRAL-----VLFLLTLL----IAGLARLFLPFATT-YVGLIVFSILFGFCVGSFSS-LTPVILVDLVGLEKL 422 (509)
T ss_pred hhhcCccccchH-----HHHHHHHH----HHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcChhhc
Confidence 999999985543 22222222 22222223333333 45677888888998888777 556788999999999
Q ss_pred hhHHHHHHHhhhhhhhhhHHHHHHHHHHhcCCC
Q 010744 404 TMIYAFDRAFEGSFSSFAAPLVGILSEKMFGYD 436 (502)
Q Consensus 404 ~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 436 (502)
..+.|+...+..++..+||++.|++.|.+++|+
T Consensus 423 ~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~ 455 (509)
T KOG2504|consen 423 SNAYGLLLLFQGIGALVGPPIAGLLYDITGNYD 455 (509)
T ss_pred chHHHHHHHHhHHHHHcCcccceeeeeccCCee
Confidence 999999999999999999999999999998874
No 64
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.2e-32 Score=262.32 Aligned_cols=291 Identities=18% Similarity=0.244 Sum_probs=239.2
Q ss_pred hHHHHHHHHHHHHHHHHhhhhch-hhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHH
Q 010744 39 ISLSLILINLAAIMERADENLLP-SVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWA 117 (502)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 117 (502)
...++..+++.++....+...++ +.+-.+.+|.+....+.+.+.++++++++++.+++|.|.||++..+.+....++++
T Consensus 43 dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~ 122 (495)
T KOG2533|consen 43 DLFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWG 122 (495)
T ss_pred HHHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHH
Confidence 34556666777777777765443 44445669999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcc-cCc
Q 010744 118 FSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQF-WGV 196 (502)
Q Consensus 118 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~-~~~ 196 (502)
+-.++....+|++.+++.|++.|+.++..+|....+++.|+.+++|+..++++.+..++|.++|++++..+.+... ...
T Consensus 123 ~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~ 202 (495)
T KOG2533|consen 123 LFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGL 202 (495)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCc
Confidence 9998888899999999999999999999999999999999999999999999999999999999999999765322 245
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHH
Q 010744 197 PGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVL 276 (502)
Q Consensus 197 ~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (502)
.||||.|++.++++++..++.++..|+.+++..-.+++|++...++.+..+.....++ ..+...++.+++|.+|...+
T Consensus 203 ~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~dp~vw~~~l 280 (495)
T KOG2533|consen 203 AGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENK--FKWKGFKEALKDPGVWPFSL 280 (495)
T ss_pred CCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccc--cCHHHHHHHHhchhHHHHHH
Confidence 8999999999999999999988887776665444333343333333332222222221 33456677889999999999
Q ss_pred HHHhhhhhhh-hHHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhc
Q 010744 277 QGIVGSLPWT-AMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRIS 331 (502)
Q Consensus 277 ~~~~~~~~~~-~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g 331 (502)
..++...... ..+|+|.|+++ .|+|..++..+..+..++++++.+++|+++||.+
T Consensus 281 ~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~ 337 (495)
T KOG2533|consen 281 CYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLK 337 (495)
T ss_pred HHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHh
Confidence 8888777655 55899999998 7799999999999999999999999999999953
No 65
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=100.00 E-value=7.4e-31 Score=254.61 Aligned_cols=351 Identities=11% Similarity=0.053 Sum_probs=259.0
Q ss_pred HHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHH
Q 010744 43 LILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAA 122 (502)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 122 (502)
+..+++..++.++..+..++..|.+++++|+++.+.|++.+.+.+++.+++++.|++.||+|||+++..+.++++++.++
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l 84 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFL 84 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 45667777888888888899999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHh---hhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcc------
Q 010744 123 VGA---SQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQF------ 193 (502)
Q Consensus 123 ~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~------ 193 (502)
+.. .+|++.+++.|++.|+|.+...+..+.++.+..|+++|++.+++.+...++|..+|+.+++.+.....
T Consensus 85 ~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~ 164 (410)
T TIGR00885 85 FWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQD 164 (410)
T ss_pred HHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhh
Confidence 654 46899999999999999999999999999999999999999999999999999999999988853210
Q ss_pred ---------------cCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHh
Q 010744 194 ---------------WGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLES 258 (502)
Q Consensus 194 ---------------~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (502)
.+..+||++|++.+++.++..++..+ .+.|+.+.+++ + +. +.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~-~~~p~~~~~~~---~----------------~~---~~ 221 (410)
T TIGR00885 165 VLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIML-TKMPALNHSDA---K----------------QI---SF 221 (410)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCCCcccc---c----------------cc---cc
Confidence 01146999999998877766554433 22222111000 0 00 00
Q ss_pred HHHHhhhcchhHHHHHHHHHHhhhhhh-hhHHHHHHHHHHh--CCChhhHHHHHHHHHhhhcccccchhhhhhhhccccC
Q 010744 259 WMATKAVIKVPTFQIIVLQGIVGSLPW-TAMVFFTMWFELI--GFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYP 335 (502)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~ 335 (502)
....++++|+|.++...+..++..... ...++++.|.++. +.+...++...+....+..+|+++++++.||+++|+.
T Consensus 222 ~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~ 301 (410)
T TIGR00885 222 SASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKV 301 (410)
T ss_pred hhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 112334667777777666666655544 3447889998764 4454555556666667888999999999999998873
Q ss_pred CcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhh
Q 010744 336 HSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEG 415 (502)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~ 415 (502)
. ..+...+.....+... .+. .. ....+.+.|++.+..+| ..++...+..+++.+..+.++...+
T Consensus 302 l-------~i~~~~~~~~~ll~~~----~~~-~~-~~~~l~~~glf~s~~fp-~i~sl~~~~~g~~~~~~s~~l~~~~-- 365 (410)
T TIGR00885 302 L-------MAYAIIGMALCLGSIF----AGG-HV-GLYCLTLCSAFMSLMFP-TIYGIALKGLGQDTKYGAAGLVMAI-- 365 (410)
T ss_pred H-------HHHHHHHHHHHHHHHH----cCC-hH-HHHHHHHHHHHHHHHHH-HHHHHHHhhhhhhhhhhHHHHHHHH--
Confidence 1 1112222211111111 112 12 24566677788887787 7888888888866654455555443
Q ss_pred hhhhhhHHHHHHHHHHh
Q 010744 416 SFSSFAAPLVGILSEKM 432 (502)
Q Consensus 416 ~~~~~~~~~~g~l~~~~ 432 (502)
+|+++.|++.|.+.|..
T Consensus 366 ~Gga~~p~l~G~~~d~~ 382 (410)
T TIGR00885 366 IGGGIVPPLQGFIIDMK 382 (410)
T ss_pred hccchHHHHHHHHHHHh
Confidence 99999999999999964
No 66
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=100.00 E-value=9.9e-31 Score=250.87 Aligned_cols=323 Identities=23% Similarity=0.394 Sum_probs=270.0
Q ss_pred HHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHH
Q 010744 45 LINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVG 124 (502)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~ 124 (502)
.+.+..+....+.....+..|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||+.+..+.++..++.++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~ 82 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLA 82 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHH
Confidence 34566777888888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHH
Q 010744 125 ASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFI 204 (502)
Q Consensus 125 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~ 204 (502)
++++++.+++.|++.|++.+...+...+++.|++|+|+|++.+++.+....+|..+++.+++.+.+. .+||+.++
T Consensus 83 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~~ 157 (352)
T cd06174 83 FASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAES-----LGWRWLFL 157 (352)
T ss_pred HhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH-----hhHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999987 78999999
Q ss_pred HHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhh
Q 010744 205 LMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLP 284 (502)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (502)
+.+++.++..+...+.+ |.++...+..+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~~~ 190 (352)
T cd06174 158 ILAILGLLLALLLLFLL-----------------------------------------------RLLLLLALAFFLLSFG 190 (352)
T ss_pred HHHHHHHHHHHHHHHHH-----------------------------------------------HHHHHHHHHHHHHHhH
Confidence 99888877776665543 2233344444444444
Q ss_pred hhhH-HHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhcccc-CCcchhHHhhhhhhhhhhHHHHHhhhc
Q 010744 285 WTAM-VFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAY-PHSGRVMCAQFSAFMGIPFSWFLLTAI 361 (502)
Q Consensus 285 ~~~~-~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (502)
.... .+.|.+.++ .|.+..+.+.......++.+++.++.+++.||+++|+ .. ..+..+.. +.....
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-------~~~~~~~~----i~~~~~ 259 (352)
T cd06174 191 YYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLL-------LIGLLLAA----LGLLLL 259 (352)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH-------HHHHHHHH----HHHHHH
Confidence 4444 778888887 5999999999999999999999999999999999986 31 11111111 111111
Q ss_pred cCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 362 PQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 362 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
...++ .+......++.|++.+...+ ....+..|..|+++|++..|+.+...+++..++|.+.|.+.|..
T Consensus 260 ~~~~~-~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~ 328 (352)
T cd06174 260 ALAPS-LALLLVALLLLGFGLGFAFP-ALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG 328 (352)
T ss_pred HHhcc-HHHHHHHHHHHHHHHhccch-hHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 11222 34456777788888888777 78999999999999999999999999999999999999999863
No 67
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=100.00 E-value=2e-31 Score=255.72 Aligned_cols=334 Identities=15% Similarity=0.123 Sum_probs=244.9
Q ss_pred hhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 010744 58 NLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRA 137 (502)
Q Consensus 58 ~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 137 (502)
...++.+|.+.+|+|.+.++.+++.+++.+++.+++++.|+++||+|||+++.++.++.+++.+.+ .+++.+.+++.|+
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~ 95 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTA 95 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHH
Confidence 567889999999999999999999999999999999999999999999999999999998888877 7889999999999
Q ss_pred HHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHH
Q 010744 138 VNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLV 217 (502)
Q Consensus 138 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~ 217 (502)
+.|++.+...+....++.|++| ++|++++++.+.+..+|..+++.+++.+.+.. ..+||+.|.+.+++.++...
T Consensus 96 ~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~---~~~w~~~f~~~~~~~~~~~~-- 169 (355)
T TIGR00896 96 LIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHS---GGHWQQALAWWALPALLALL-- 169 (355)
T ss_pred HHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhhHHHHHHHHHHHHHHHHH--
Confidence 9999999988888889999995 78999999999999999999999999887651 02399999887665443322
Q ss_pred HHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhh-hhhHHHHHHHHH
Q 010744 218 LVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLP-WTAMVFFTMWFE 296 (502)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 296 (502)
.+.++.+++. +++ ++ ..+ ...++.+|+|.++...+..++.... +....|+|.|++
T Consensus 170 ~~~~~~~~~~-~~~---~~-------------~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~ 225 (355)
T TIGR00896 170 AWIPQVRRRV-AAN---QT-------------TTR-------LTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILI 225 (355)
T ss_pred HHhhhhcccc-CCC---CC-------------CCC-------CCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222221111 000 00 000 1123356667776655544444333 344478999999
Q ss_pred HhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHH
Q 010744 297 LIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLV 376 (502)
Q Consensus 297 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (502)
+.|.+..+.+...+...++.++++++.|++.||+++|+. ....+..+..... +.+. .... . ... ....
T Consensus 226 ~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~------~~~~~~~~~~~~~-~~~~-~~~~-~-~~~--~~~~ 293 (355)
T TIGR00896 226 SHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRG------IVAVLAVLQLVGL-CGLL-FAPM-H-GLW--AWAL 293 (355)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchH------HHHHHHHHHHHHH-HHHH-Hhhh-h-HHH--HHHH
Confidence 899999999999999999999999999999999965542 1111111111111 1111 1111 1 111 1345
Q ss_pred HHHHHHhhhccCCCccchhccc-CCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcCC
Q 010744 377 LMGLTISWNATAANGPMFAEVV-PAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFGY 435 (502)
Q Consensus 377 ~~g~~~~~~~~~~~~~~~~~~~-p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~ 435 (502)
+.|++.+...+ ...+...+.. ++++++...++.+.+.++++.++|.+.|.+.|+.++|
T Consensus 294 l~g~~~g~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~ 352 (355)
T TIGR00896 294 VLGLGQGGAFP-LALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNW 352 (355)
T ss_pred HHHHhhhhHhH-HHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 67777776665 4444444434 4567789999999999999999999999999998766
No 68
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=100.00 E-value=3.3e-31 Score=258.42 Aligned_cols=354 Identities=16% Similarity=0.167 Sum_probs=246.9
Q ss_pred HHHHHhhhhchhhHHHHHhhcC--CCCCCchHHHHH-----HHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHH
Q 010744 51 IMERADENLLPSVYKEVSEAFN--AGPSDLGYLTFI-----RNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAV 123 (502)
Q Consensus 51 ~~~~~~~~~~~~~~~~i~~~~~--~s~~~~g~~~s~-----~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 123 (502)
+.+.+|++.++...+.+.+++. .++++.+.+.+. ..++..+++++.|+++||+|||+++..+.++.+++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 4677888888888888888865 445566665543 233445788999999999999999999999999999999
Q ss_pred HhhhHHH--------HHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcc--
Q 010744 124 GASQHFL--------HVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQF-- 193 (502)
Q Consensus 124 ~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~-- 193 (502)
+++++++ .+++.|+++|++.+...+....++.|++|+++|++..++.+.+..+|.++++.++..+.....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~ 162 (394)
T TIGR00883 83 GLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDD 162 (394)
T ss_pred hhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 9998875 478899999999999999999999999999999999999999999999999998877643110
Q ss_pred -cCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhH--
Q 010744 194 -WGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPT-- 270 (502)
Q Consensus 194 -~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 270 (502)
....+||+.|++.+++.++...+....+|++++..+++++ ++.+.+ .++.++++.
T Consensus 163 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~-------~~~~~~~~~~~ 220 (394)
T TIGR00883 163 ALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEKH---------------KKKRGP-------IRETLTKHRKP 220 (394)
T ss_pred HhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhcc---------------ccccCC-------HHHHHHhchHH
Confidence 1236999999988776655444433333333221111000 000111 112223322
Q ss_pred HHHHHHHHHhhhhhhh-hHHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhh
Q 010744 271 FQIIVLQGIVGSLPWT-AMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAF 348 (502)
Q Consensus 271 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 348 (502)
++......+.....+. ...+.|.|+++ +|.+..+.+.......++.+++.++.|++.||++||+.. ...+..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~------~~~~~~ 294 (394)
T TIGR00883 221 FLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVL------IIFTVL 294 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH------HHHHHH
Confidence 4444444444433333 34788999965 899999999999999999999999999999999998731 111111
Q ss_pred hhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHh-hhhhhhhhHHHHHH
Q 010744 349 MGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAF-EGSFSSFAAPLVGI 427 (502)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~-~~~~~~~~~~~~g~ 427 (502)
... ............. ..+.......+.|++.+...+ ...+++.|.+|++.|+++.++.... ..++..++|.+.|.
T Consensus 295 ~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~ 371 (394)
T TIGR00883 295 AAL-LAVPLLMALLDSG-SFTLFFFLVLGLALIGGMYTG-PMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAA 371 (394)
T ss_pred HHH-HHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHhh-hHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHH
Confidence 111 1101111111112 233344555666777766666 5788999999999999999985444 55777899999999
Q ss_pred HHHHhcCC
Q 010744 428 LSEKMFGY 435 (502)
Q Consensus 428 l~~~~~~~ 435 (502)
+.|+.+.+
T Consensus 372 l~~~~g~~ 379 (394)
T TIGR00883 372 LVAMTGDW 379 (394)
T ss_pred HHHHcCcc
Confidence 99986543
No 69
>PRK11010 ampG muropeptide transporter; Validated
Probab=100.00 E-value=3.5e-30 Score=255.70 Aligned_cols=352 Identities=17% Similarity=0.193 Sum_probs=246.6
Q ss_pred HHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhc-----CCchh-HHHHHHHHH
Q 010744 44 ILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINY-----DRPAV-LTIGILCWA 117 (502)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-----Grr~~-l~~~~~~~~ 117 (502)
..+++..+..+......+..+|...++.|.+.+++|.+ +.....+ ++.+++|+++||+ |||+. +..+.+..+
T Consensus 15 ~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~ 92 (491)
T PRK11010 15 AILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLL 92 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHH
Confidence 34445556666777788889999999999999999997 4444444 5889999999999 99985 668888887
Q ss_pred HHHHHHHhh---hHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhh-hcc
Q 010744 118 FSTAAVGAS---QHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAG-HQF 193 (502)
Q Consensus 118 ~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-~~~ 193 (502)
++..++++. ++++.+.+.+++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++.++.+ .
T Consensus 93 ~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~-- 170 (491)
T PRK11010 93 VAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRY-- 170 (491)
T ss_pred HHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--
Confidence 887777775 5788899999999999999999999999999999999999999999999999999999999987 4
Q ss_pred cCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHH
Q 010744 194 WGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQI 273 (502)
Q Consensus 194 ~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (502)
.|||..|++.+++.++..+..++ .|||+...+++ ++ . + +....+.++.++++..+.
T Consensus 171 ---~GWr~~f~i~a~l~ll~~l~~~~-~~e~~~~~~~~----~~--~-----------~---~~~~~~l~~~~~~~~~~~ 226 (491)
T PRK11010 171 ---LGWQGMYWLMAALLIPCIIATLL-APEPTDTIPVP----KT--L-----------E---QAVVAPLRDFFGRNNAWL 226 (491)
T ss_pred ---cCHHHHHHHHHHHHHHHHHHHHh-cCCCccccccc----cc--h-----------h---hhHHHHHHHHHcCcCHHH
Confidence 69999999999887776665554 45443211000 00 0 0 011123444555555554
Q ss_pred HHHHHHhhhhh-hhhHHHHHHHHHH-hCCChhhHHHHHH-HHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhh
Q 010744 274 IVLQGIVGSLP-WTAMVFFTMWFEL-IGFDHSSTAALLS-LFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMG 350 (502)
Q Consensus 274 ~~~~~~~~~~~-~~~~~~~~~~~~~-~g~s~~~~~~~~~-~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 350 (502)
..+..+..... .....+.+.|+.+ +|++..+.+.... ...++.+++.+++|++.||+++|+.. ...+....
T Consensus 227 ~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l------~i~~~l~~ 300 (491)
T PRK11010 227 ILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRAL------MIFGILQG 300 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH------HHHHHHHH
Confidence 44433333333 3334677777654 9999999999874 55678999999999999999988631 11111111
Q ss_pred hhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHH
Q 010744 351 IPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSE 430 (502)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~ 430 (502)
........... ..++ ...+....++..+..+...+ ...++..+..+++.+++..|+.+...++++.+++.+.|.+.|
T Consensus 301 l~~l~~~~l~~-~~~~-~~~l~~~~~l~~~~~g~~~~-~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~ 377 (491)
T PRK11010 301 VSNAGYWLLSI-TDKN-LYSMGAAVFFENLCGGMGTA-AFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVE 377 (491)
T ss_pred HHHHHHHHHHh-cccc-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111111 1122 22222233332222232223 356777888899999999999999999999999999999999
Q ss_pred Hh
Q 010744 431 KM 432 (502)
Q Consensus 431 ~~ 432 (502)
..
T Consensus 378 ~~ 379 (491)
T PRK11010 378 AH 379 (491)
T ss_pred Hh
Confidence 85
No 70
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=100.00 E-value=1.3e-30 Score=252.16 Aligned_cols=342 Identities=12% Similarity=0.043 Sum_probs=256.1
Q ss_pred HHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhH----HHHHHHHHHHHH
Q 010744 46 INLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVL----TIGILCWAFSTA 121 (502)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l----~~~~~~~~~~~~ 121 (502)
+.+.++..+.......|.+|.+.+|+|.|.+++|++.+++.+...++++++|+++||+|||+.. ..+..+..+ .
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~ 86 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--A 86 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--H
Confidence 4455666677777888999999999999999999999999999999999999999999985433 222222222 2
Q ss_pred HHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchH
Q 010744 122 AVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRC 201 (502)
Q Consensus 122 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~ 201 (502)
.+..+++++.+++.|+++|.+.+...|...++..++ +++|++++|....+.++|.+++|++++.+.+. .|||.
T Consensus 87 ~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~-----~g~~~ 159 (382)
T TIGR00902 87 FSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGM-----FDEQN 159 (382)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHH-----cChhH
Confidence 445688999999999999999988889988887665 57899999999999999999999999999998 89999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhh
Q 010744 202 AFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVG 281 (502)
Q Consensus 202 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (502)
.|++.+... +..++.+..+|++++..+++ ++ + . +..+..++++|+|.++...+..++.
T Consensus 160 ~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~-----------~---~----~~~~~~~~~l~~~~~~~~l~~~~l~ 217 (382)
T TIGR00902 160 ILAILTAGL-AFMLIGFLIKPTIPPKDAIP---ED-----------E---S----QGDSAFIALLKNPMNLRFLAAVCLI 217 (382)
T ss_pred HHHHHHHHH-HHHHHHHHcCCCCCCCcccc---cc-----------c---c----ccchhHHHHHcChHHHHHHHHHHHH
Confidence 998876553 33333333444322111100 00 0 0 0012344678889888887776665
Q ss_pred hhhhhhH-HHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhh
Q 010744 282 SLPWTAM-VFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTA 360 (502)
Q Consensus 282 ~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (502)
...+... ++.|.|+++.|.++.+.|.+.....++.+++..+.+++.||++.|+. ...+. ....+.+..
T Consensus 218 ~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~-------l~~~~----~~~~~~~~~ 286 (382)
T TIGR00902 218 QGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDL-------LLISA----IACVGRWAI 286 (382)
T ss_pred HHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHH-------HHHHH----HHHHHHHHH
Confidence 5555444 78899999999999999999999899999999999999999998873 11222 222222222
Q ss_pred ccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHH-hhhhhhhhhHHHHHHHHHHh
Q 010744 361 IPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRA-FEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~-~~~~~~~~~~~~~g~l~~~~ 432 (502)
....+ ..+.+.....+.|+..+...+ ....++.+. |+++++++.++++. ...+|..++|.++|++.|+.
T Consensus 287 ~~~~~-~~~~~~~~q~l~g~~~~~~~~-~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~ 356 (382)
T TIGR00902 287 IGAIE-AFPLIFLLQILHCGTFAVCHL-AAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL 356 (382)
T ss_pred HHhHh-hHHHHHHHHHHHHHHHHHHHH-HHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 22223 344556677888888888887 677888887 88999999999874 55688889999999999996
No 71
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=100.00 E-value=3.1e-30 Score=261.48 Aligned_cols=428 Identities=14% Similarity=0.168 Sum_probs=293.7
Q ss_pred HHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHH
Q 010744 42 SLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTA 121 (502)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~ 121 (502)
.++.+++..+.........+..++.++++|+++.++.|++.+.+.++++++.++.++++||+|||+++.++.++++++++
T Consensus 34 ~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~l 113 (633)
T TIGR00805 34 FSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSF 113 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHH
Confidence 33445556777777778889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhh---------------------------------------------------HHHHHHHHHHHHhhhhhhhhhhh
Q 010744 122 AVGASQ---------------------------------------------------HFLHVGMWRAVNGFGLAIVIPAL 150 (502)
Q Consensus 122 ~~~~~~---------------------------------------------------~~~~l~~~r~l~G~~~~~~~~~~ 150 (502)
++++.+ .+..++++|+++|+|.+...+..
T Consensus 114 l~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~ 193 (633)
T TIGR00805 114 LLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLG 193 (633)
T ss_pred HHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcC
Confidence 998864 24567899999999999999999
Q ss_pred HHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcc-c----------C-----cc-cchHHHHHHHHHHHHH
Q 010744 151 QSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQF-W----------G-----VP-GWRCAFILMATLSVLI 213 (502)
Q Consensus 151 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~-~----------~-----~~-~wr~~f~~~~~~~~~~ 213 (502)
.+++.|++|+++|+++++++..+..+|.++|+++++++.+... . + .. .||..|++.+++.++.
T Consensus 194 ~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~ 273 (633)
T TIGR00805 194 ISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLT 273 (633)
T ss_pred chhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999876410 0 0 01 3778899999888888
Q ss_pred HHHHHHhccCCccccCCCC--CCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhhhhH-HH
Q 010744 214 AFLVLVFVVDPRKKASTFH--GTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLPWTAM-VF 290 (502)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 290 (502)
+++.++++++.+....+.+ .++++...... ...........++..+..++++++|.++...+..++....+..+ +|
T Consensus 274 ~v~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~ 352 (633)
T TIGR00805 274 SIPFFFFPKALPKEGKRVNVDVHETEKLEKSE-DKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITF 352 (633)
T ss_pred HHHHHhCccccCCcccccchhhhhhhcccccc-cccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 7776667665432211110 00000000000 00000011123344566778999999999888877766655444 89
Q ss_pred HHHHHHH-hCCChhhHHHHHHHHHh-hhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhh--------
Q 010744 291 FTMWFEL-IGFDHSSTAALLSLFAI-GCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTA-------- 360 (502)
Q Consensus 291 ~~~~~~~-~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 360 (502)
+|.|+++ +|+++.+++++.....+ +.+++.+++|++.||++.+.... .....+..++.+......++.
T Consensus 353 lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~C~~~~~a 430 (633)
T TIGR00805 353 LPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKA--AYFAICLSTLSYLLCSPLFLIGCESAPVA 430 (633)
T ss_pred HHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHH--HHHHHHHHHHHHHHHHHHHeecCCCCccc
Confidence 9999987 99999999999887766 56889999999999998553211 111111111111110000000
Q ss_pred ------------------------ccC-----------------------------------------------------
Q 010744 361 ------------------------IPQ----------------------------------------------------- 363 (502)
Q Consensus 361 ------------------------~~~----------------------------------------------------- 363 (502)
...
T Consensus 431 gv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~~~~~~y~~CsCi~~~~~~~a~~g~C 510 (633)
T TIGR00805 431 GVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVGTGSNMVYTNCSCVQTPGNSSAKKGLC 510 (633)
T ss_pred eeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCCCCccCCCCcceecccccccCCCCCCCcCCCC
Confidence 000
Q ss_pred --C-cchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhh-hhhHHHHHHHHHHhcC-CCCC
Q 010744 364 --S-VSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFS-SFAAPLVGILSEKMFG-YDSK 438 (502)
Q Consensus 364 --~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~-~~~~~~~g~l~~~~~~-~~~~ 438 (502)
. ......+.+.+++..+..+....| ....+-+.+|+++|..+.|+...+..+.+ .-+|.+.|++.|...- |+..
T Consensus 511 ~~~C~~~~~~f~~~~~~~~~~~~~~~~p-~~~i~lR~V~~~~rs~alg~~~~~~rllg~iP~pi~fG~~iD~sC~~W~~~ 589 (633)
T TIGR00805 511 NPPCATSLLYFLILFIPLSFIAFITAVP-LYMVLLRVVNPEEKSLAIGLQWLCMRVFATIPAPILFGLLIDVSCLHWQTL 589 (633)
T ss_pred CcccchhHHHHHHHHHHHHHHHHhccCc-hheEEeeccCcccchHHhhHHHHHHHHhcCCChhHHHhhhhhchhheeccc
Confidence 0 000122223333333333344442 45667788999999999999998888755 5999999999999765 3322
Q ss_pred -CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 010744 439 -AIDPVMGSPREALALSRGLLSMMAVPFGLCCLFYT 473 (502)
Q Consensus 439 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (502)
..+....-.++...+++.+..+....-+++.++.+
T Consensus 590 ~cg~~g~C~~Yd~~~l~~~~~~~~~~~~~~~~~~~~ 625 (633)
T TIGR00805 590 CCGARGACRMYDNDNLRNIYLGLTIALRGSGLLLLF 625 (633)
T ss_pred cCCCCCceeeechHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23344444566666666666655544444444333
No 72
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.98 E-value=1e-29 Score=246.81 Aligned_cols=338 Identities=12% Similarity=0.059 Sum_probs=225.3
Q ss_pred HHHHHHHhhhhchhhHHH-HHhhcCCCCCCchHHHHHHHH-HHhhhcchhhhhhhhcCCchhH-HHHHHHHHHHHHHHHh
Q 010744 49 AAIMERADENLLPSVYKE-VSEAFNAGPSDLGYLTFIRNF-VQGLSSPLAGVLVINYDRPAVL-TIGILCWAFSTAAVGA 125 (502)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~-~~~~~~~~~G~l~dr~Grr~~l-~~~~~~~~~~~~~~~~ 125 (502)
..++.........+.+|. +.+|+|++.+++|++.+...+ ++.++.++.|+ .||+||||.+ ..+.++.+++..+.++
T Consensus 23 ~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~ 101 (393)
T PRK15011 23 VAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAW 101 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHH
Confidence 345555555555566555 678999999999999877655 55555555555 9999999864 5666777788888889
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcc--hhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHH
Q 010744 126 SQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRG--AGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAF 203 (502)
Q Consensus 126 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~--~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f 203 (502)
+++++.+++.+.+.|...+...|...+++.|+.++++|. ...++.+.+.++|.++||++++.+.++ .|||+.|
T Consensus 102 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~-----~gw~~~f 176 (393)
T PRK15011 102 NRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMG-----FSFTVMY 176 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHh-----cChHHHH
Confidence 999999876665555555677888888889988766553 445788899999999999999999987 8999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhh
Q 010744 204 ILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSL 283 (502)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (502)
++.+++.++..++.++..||++..+++. + ++ . +.. ++ +.+..+...........
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~--~---------------~~~----~~--~~~~~~~~~~~~~~~~~ 230 (393)
T PRK15011 177 LSAAVAFIVCGVMVWLFLPSMRKELPLA-T--GT--L---------------EAP----RR--NRRDTLLLFVICTLMWG 230 (393)
T ss_pred HHHHHHHHHHHHHHHhhcCccCCCCccc-c--cc--c---------------ccc----cc--ccccHHHHHHHHHHHHH
Confidence 9999888887777666555543221110 0 00 0 000 00 00111222222222222
Q ss_pred hhhhH-HHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhc
Q 010744 284 PWTAM-VFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAI 361 (502)
Q Consensus 284 ~~~~~-~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (502)
.+... .+.|.|+++ +|+++.+++.+.....++.+++.++.|+++||+++|+.. ..+........ ... ..
T Consensus 231 ~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~-------~~~~~~~~~~~-~~~-~~ 301 (393)
T PRK15011 231 TNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLM-------RVAAVAGVCFY-AGM-LM 301 (393)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH-------HHHHHHHHHHH-HHH-HH
Confidence 23333 578988876 899999999888877788888999999999999998731 11111111111 111 11
Q ss_pred cCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 362 PQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 362 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
.++.+. .....++.++..+...+ ....+.+|..| ++++++.++.+...++|..++|.+.|.+.|..
T Consensus 302 --~~~~~~-~l~~~~l~~~~~g~~~~-~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~ 367 (393)
T PRK15011 302 --AHSPAI-LLGLQLLNAIYIGILGG-IGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIW 367 (393)
T ss_pred --HhhHHH-HHHHHHHHHHHHHHHHH-HHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 122222 22333333444343333 34566788887 46999999999999999999999999999974
No 73
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.97 E-value=2.8e-29 Score=244.70 Aligned_cols=346 Identities=13% Similarity=0.067 Sum_probs=235.8
Q ss_pred HHHHHHHHHhhhhc-hhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCC-chhHHHHHHHHHHHHHHHH
Q 010744 47 NLAAIMERADENLL-PSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDR-PAVLTIGILCWAFSTAAVG 124 (502)
Q Consensus 47 ~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~l~~~~~~~~~~~~~~~ 124 (502)
++..++.+...... +++.+.+.+++|.+.+|+|++.+++.++..++++++|+++||+|| |+++.++.++.+++..+..
T Consensus 8 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~ 87 (418)
T TIGR00889 8 KFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAA 87 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 33444455554444 667777888899999999999999999999999999999999965 7788999999989998999
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhhhhHHHHh--------hccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCc
Q 010744 125 ASQHFLHVGMWRAVNGFGLAIVIPALQSFIA--------DSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGV 196 (502)
Q Consensus 125 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~--------~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~ 196 (502)
+.++++.+++.|++.|++.+...+...++.. |......|.+..| .+|.++||.+++.+...
T Consensus 88 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~----- 156 (418)
T TIGR00889 88 QVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIE----- 156 (418)
T ss_pred HhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhccc-----
Confidence 9999999999999999987777776665532 2233334555555 36888888888877322
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHH
Q 010744 197 PGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVL 276 (502)
Q Consensus 197 ~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (502)
..|+ +|++.+++.++..++.++. ||++...+++ +.+ ..+......++++|+|.++...+
T Consensus 157 ~~~~-~f~~~~~~~~~~~~~~~~~-~e~~~~~~~~-----~~~--------------~~~~~~~~~~~~~k~~~~~~~~~ 215 (418)
T TIGR00889 157 LSNI-QLYITAGSSALLGVFALTL-PDIPVAKSTA-----KMS--------------IKVMLGLDAFILFKNKRMAIFFF 215 (418)
T ss_pred chhH-HHHHHHHHHHHHHHHHhcC-CCCCCCcccc-----ccC--------------HHHHhhhhHHHHhcCCCeeeHHH
Confidence 3455 4556666666555544444 4432111110 000 00011112345677888777666
Q ss_pred HHHhhhhhhhhH-HHHHHHHHHhCCCh--------hhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhh
Q 010744 277 QGIVGSLPWTAM-VFFTMWFELIGFDH--------SSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSA 347 (502)
Q Consensus 277 ~~~~~~~~~~~~-~~~~~~~~~~g~s~--------~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 347 (502)
..++........ .+.|.++++.|.++ ...+...+...+..+++.+..+++.||+|+|+.. ..+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l-------~~~~ 288 (418)
T TIGR00889 216 FSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVM-------LLSL 288 (418)
T ss_pred HHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH-------HHHH
Confidence 665554433333 67788888776554 5568888889999999999999999999998732 1222
Q ss_pred hhhhhHHHHHhhhccCC-cchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHH-HhhhhhhhhhHHHH
Q 010744 348 FMGIPFSWFLLTAIPQS-VSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDR-AFEGSFSSFAAPLV 425 (502)
Q Consensus 348 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~-~~~~~~~~~~~~~~ 425 (502)
++..... . ....... ....+.+.+..++.|++.+...+ ....++.|.+|++.|+++.|+.+ ....++..+||.+.
T Consensus 289 ~~~~v~~-~-l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~-~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~ 365 (418)
T TIGR00889 289 VAWALRF-G-FFAYGDPEYFGYALLFLSMIVYGCAFDFFNI-SGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILS 365 (418)
T ss_pred HHHHHHH-H-HHHHcCcchhhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 2111111 1 1111111 11123445566777777776655 56778899999999999999997 56788999999999
Q ss_pred HHHHHHhcC
Q 010744 426 GILSEKMFG 434 (502)
Q Consensus 426 g~l~~~~~~ 434 (502)
|.+.|+.++
T Consensus 366 G~l~~~~g~ 374 (418)
T TIGR00889 366 GVMVEKMFA 374 (418)
T ss_pred HHHHHHhcc
Confidence 999999754
No 74
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.97 E-value=2.8e-29 Score=223.51 Aligned_cols=351 Identities=20% Similarity=0.187 Sum_probs=275.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHH
Q 010744 40 SLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFS 119 (502)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 119 (502)
+..+..+.+..+----..+.++|+++++.+|+|+|.+..|++.++..+...+.+++..+++.|+|.++.+..++++.+++
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G 90 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAG 90 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHH
Confidence 33333344333433445578899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccc
Q 010744 120 TAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGW 199 (502)
Q Consensus 120 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~w 199 (502)
.++-... +.+.++.+-.+.|.|.+...+..+.++.+.| ||+-+..+|+++...++|..+++.+...+.++. .+|
T Consensus 91 ~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~F-pk~~~~mtglYs~sl~~~aaLaa~lavpla~~~----~gW 164 (395)
T COG2807 91 ILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDF-PKRVGLMTGLYSTSLGAGAALAAALAVPLAQHS----GGW 164 (395)
T ss_pred HHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhc-ccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhh----ccH
Confidence 9999887 7888899999999999999999999999999 788999999999999999999999999998871 489
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHH
Q 010744 200 RCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGI 279 (502)
Q Consensus 200 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (502)
|.....-+.++++..++++.-. .++..... +....+...++|+|.-|...+++.
T Consensus 165 ~~aL~~WAl~allAl~~WlPq~--~r~~~~~~------------------------~~~~~~~~~vw~~~~aW~vtLfmG 218 (395)
T COG2807 165 RGALGFWALLALLALLIWLPQA--LREQAASI------------------------ATKLVSVRKVWRSPLAWQVTLFMG 218 (395)
T ss_pred HHHHHHHHHHHHHHHHHHhhhc--cccccccc------------------------ccccccccccccCchhHHHHHHHH
Confidence 9999999998887777665432 11111110 001112234888998888888888
Q ss_pred hhhhhh-hhHHHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHh
Q 010744 280 VGSLPW-TAMVFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLL 358 (502)
Q Consensus 280 ~~~~~~-~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (502)
++...+ ..+.|+|.++.|.|+|+.++|.+.+...+..++..+....+.+|...+++. ... ..++.......+
T Consensus 219 lqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~-----~~~--~~~~~l~G~~G~ 291 (395)
T COG2807 219 LQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPL-----VVL--ALLLMLVGLVGL 291 (395)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchH-----HHH--HHHHHHHHHHHH
Confidence 877654 455999999999999999999999999999999999999999987666542 111 112222222222
Q ss_pred hhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhccc-CCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcCC
Q 010744 359 TAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVV-PAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFGY 435 (502)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~ 435 (502)
...+.... ... .+++|++.+..++ +..+.+.+.. .++..+.-.|+.+.++++-.++||.+.|++.|.+++|
T Consensus 292 ~~~P~~~~---~lw--~~llG~G~G~~F~-laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw 363 (395)
T COG2807 292 LLAPGQLP---ILW--ALLLGLGQGGAFP-LALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSW 363 (395)
T ss_pred HHhhhhHH---HHH--HHHHhCccchHHH-HHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCCh
Confidence 22232221 111 4678888888887 5555555444 4567788999999999999999999999999999987
No 75
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.97 E-value=8.3e-29 Score=239.63 Aligned_cols=339 Identities=15% Similarity=0.096 Sum_probs=241.9
Q ss_pred HHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCc----hhHHHHHHHHHHHHHHHHh
Q 010744 50 AIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRP----AVLTIGILCWAFSTAAVGA 125 (502)
Q Consensus 50 ~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr----~~l~~~~~~~~~~~~~~~~ 125 (502)
++..........|.+|.+.+|+|.|.+++|++.+++.++..++++++|++.||+||| +.+.+...+. .......
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~ 90 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFG 90 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHh
Confidence 344444556788899999999999999999999999999999999999999999994 3333222222 2233444
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHH
Q 010744 126 SQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFIL 205 (502)
Q Consensus 126 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~ 205 (502)
++++|.+++.|++.|++.+...|...+++.++ .++|+++.+......++|.++||++++++.++ .|||..|++
T Consensus 91 ~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~-----~g~~~~f~~ 163 (382)
T PRK11128 91 AHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSW-----FGEQAILWI 163 (382)
T ss_pred cccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHH-----cChhHHHHH
Confidence 68899999999999999999999888888877 46789999999999999999999999999987 899999998
Q ss_pred HHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhh
Q 010744 206 MATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLPW 285 (502)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (502)
.++..++..+. .+..|+++...++ +++ . ++..+..++++|+|.++...+..++....+
T Consensus 164 ~~~~~~~~~~~-~~~~~~~~~~~~~----~~~----------~-------~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~ 221 (382)
T PRK11128 164 LTAGVASMLLG-QLLRPTIMPQGES----RQQ----------E-------SAGWPAWKALLKEPTVWRFLLCVSLLQGSH 221 (382)
T ss_pred HHHHHHHHHHH-HHccCCCCCcccc----ccc----------c-------ccccchHHHHHcChhHHHHHHHHHHHHHHh
Confidence 77654443333 3333332111000 000 0 001123456788888887776655554444
Q ss_pred hh-HHHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCC
Q 010744 286 TA-MVFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQS 364 (502)
Q Consensus 286 ~~-~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (502)
.. .++.|.|+++.|.+..+.|.+.+...++.++..++.+++.||+++|+. ...+..... +.+......
T Consensus 222 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~-------l~~~~~~~~----~~~~~~~~~ 290 (382)
T PRK11128 222 AAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDL-------LLLSAICGV----VRWGLMGST 290 (382)
T ss_pred HhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH-------HHHHHHHHH----HHHHHHHhh
Confidence 43 377888998899999999999998888889999999999999998873 111121111 111111222
Q ss_pred cchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHh-hhhhhhhhHHHHHHHHHHhc
Q 010744 365 VSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAF-EGSFSSFAAPLVGILSEKMF 433 (502)
Q Consensus 365 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~-~~~~~~~~~~~~g~l~~~~~ 433 (502)
++ .+...+..++.|++.+...+ ....+..+. +++++++..+..+.. ..+|..+||.+.|.+.|..+
T Consensus 291 ~~-~~~~~~~~~l~g~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g 357 (382)
T PRK11128 291 TA-LPWLIVIQILHCGTFTVCHL-AAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLG 357 (382)
T ss_pred hh-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 23 34455667777887777666 566777775 556678889988744 45566899999999999863
No 76
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.97 E-value=1.5e-28 Score=241.71 Aligned_cols=353 Identities=17% Similarity=0.166 Sum_probs=270.9
Q ss_pred HHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHH
Q 010744 43 LILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAA 122 (502)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 122 (502)
+..++++.++..+...+.....+.+..+..-|+..++++..+..+...+.++++|.++||++||++++.+.++.++..++
T Consensus 12 Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~ 91 (524)
T PF05977_consen 12 FRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALL 91 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHH
Confidence 34455666666666667777788888888888999999999999999999999999999999999999999988776655
Q ss_pred HHhh-----hHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcc
Q 010744 123 VGAS-----QHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVP 197 (502)
Q Consensus 123 ~~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~ 197 (502)
.++. .+.+.+++.-++.|++.+...|+.++++.|..|+++...++++.+...++..++||.++|.+... .
T Consensus 92 L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~-----~ 166 (524)
T PF05977_consen 92 LAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAF-----F 166 (524)
T ss_pred HHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHH-----H
Confidence 5442 47888999999999999999999999999999999999999999999999999999999999887 7
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHH
Q 010744 198 GWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQ 277 (502)
Q Consensus 198 ~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (502)
|-.++|.+.++..++.........++++.. +.. ++..+++.....+.+.++|.+...++.
T Consensus 167 G~~~~f~inalsfl~~i~~l~~~~~~~~~~-~~~-------------------~e~~~~~l~~G~ryv~~~~~l~~~l~~ 226 (524)
T PF05977_consen 167 GAAAAFLINALSFLISILALLRWKPPPPPS-SLP-------------------RERFFSALREGLRYVRSSPPLRSVLLR 226 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccccccc-ccc-------------------hhhhhhhHHHHHHHHhcchHHHHHHHH
Confidence 888999998876555444433333322111 110 112234445556666677777666555
Q ss_pred HHhhhhhhh-hHHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHH
Q 010744 278 GIVGSLPWT-AMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSW 355 (502)
Q Consensus 278 ~~~~~~~~~-~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~ 355 (502)
.+....... ....+|.+.++ +|.++...|++.+..++++++|.++.+++.+|+++++.. ..+.....
T Consensus 227 ~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv-----------~~~~~~~a 295 (524)
T PF05977_consen 227 SFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLV-----------LLASLLFA 295 (524)
T ss_pred HHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhh-----------HHHHHHHH
Confidence 444433333 33668998876 899999999999999999999999999999988877631 11111112
Q ss_pred HHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhc
Q 010744 356 FLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMF 433 (502)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~ 433 (502)
+........++ .+...+.+++.|++...... ...+..++..|++.||+++++++++...+..+|..+.|.+.+..+
T Consensus 296 ~~~~~lal~~~-~~~~~~~l~l~G~~~~~~~~-~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g 371 (524)
T PF05977_consen 296 LALLLLALSPS-FWLALIALFLAGAAWIIANS-SLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFG 371 (524)
T ss_pred HHHHHHhcchH-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 22222233333 44456677788888877776 578889999999999999999999999999999999999999963
No 77
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.97 E-value=1.3e-28 Score=270.62 Aligned_cols=359 Identities=14% Similarity=0.049 Sum_probs=252.5
Q ss_pred HHHHHHHHHHHHhhhhchhhH-HHHHhhcCCCC-CCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHH---HHHHHHH
Q 010744 44 ILINLAAIMERADENLLPSVY-KEVSEAFNAGP-SDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTI---GILCWAF 118 (502)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~s~-~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~---~~~~~~~ 118 (502)
...++..+.+.+....+..+. ..+..+.+.+. ...++..+++.++++++++++|+++||+|||+++.. ..++..+
T Consensus 18 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~ 97 (1140)
T PRK06814 18 WTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAA 97 (1140)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHH
Confidence 334444454444444433332 23444444332 347888899999999999999999999999997533 2233333
Q ss_pred HHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCccc
Q 010744 119 STAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPG 198 (502)
Q Consensus 119 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~ 198 (502)
..+.....+|+++++++|+++|++.+...|+..+++.+++|+++|++++|+.+++.++|.++||++++++... .+
T Consensus 98 ~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~-----~~ 172 (1140)
T PRK06814 98 LAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATIS-----GN 172 (1140)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhc-----cc
Confidence 3333334589999999999999999999999999999999999999999999999999999999999999987 89
Q ss_pred chHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHH
Q 010744 199 WRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQG 278 (502)
Q Consensus 199 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (502)
|++.|+..++..++..++.+++++.++. ....+. .....++....++.+.+++.++...+..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (1140)
T PRK06814 173 FVILVALLMGIAVLGWLASLFIPKTGNA-APDLKI-----------------DRNIIRSTITLLKYAKADKRIWLAILGI 234 (1140)
T ss_pred cHHHHHHHHHHHHHHHHHHhhCCCCCCC-CCCCee-----------------ccchHHHHHHHHHHHhcCchHHHHHHHH
Confidence 9999955544444444444444333221 111000 0011123334566778888888887776
Q ss_pred HhhhhhhhhH-HHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHH
Q 010744 279 IVGSLPWTAM-VFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWF 356 (502)
Q Consensus 279 ~~~~~~~~~~-~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (502)
+...+..+.. +++|.|+++ +|.++...+++.+...++.+++.++.|++.|+..+++... ... ++.++....+
T Consensus 235 ~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~----~~~--~~~~~~~~~l 308 (1140)
T PRK06814 235 SWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVP----IGA--LLMGLFGLDL 308 (1140)
T ss_pred HHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeeh----HHH--HHHHHHHHHH
Confidence 6665554444 789999987 8999999999999999999999999999998877665321 111 1111111111
Q ss_pred Hhh---------------hccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhh
Q 010744 357 LLT---------------AIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFA 421 (502)
Q Consensus 357 ~~~---------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~ 421 (502)
.+. .+....+ .+.+.+..+++|++.+...+ ...+++++..|++.+|+++|+.+++.+++..++
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig 386 (1140)
T PRK06814 309 AFASSSVPAEPAQLKSILVFLSKRH-GWRILIDLFGLAAAGGLYIV-PLFAALQAWANPAHRARVIAANNVLNAAFMVAG 386 (1140)
T ss_pred Hhcccccccccccccchhhhhcccc-cHHHHHHHHHHHHHHHHhHH-HHHHHHHhhCCcccceeeeHHHHHHHHHHHHHH
Confidence 110 0001122 33455667777888877776 578899999999999999999999999999999
Q ss_pred HHHHHHHHHHhc
Q 010744 422 APLVGILSEKMF 433 (502)
Q Consensus 422 ~~~~g~l~~~~~ 433 (502)
+.+.|.+.+...
T Consensus 387 ~~~~g~l~~~~~ 398 (1140)
T PRK06814 387 TIILALLQALGF 398 (1140)
T ss_pred HHHHHHHHHhcc
Confidence 999999986543
No 78
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=2.8e-28 Score=220.67 Aligned_cols=357 Identities=17% Similarity=0.161 Sum_probs=277.0
Q ss_pred hHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHH
Q 010744 39 ISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAF 118 (502)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 118 (502)
.+..+..+....++.++......+++|.+++.|+++..|.+++...++.++.+.+++.|++.+|+|+|+.++.|+.++++
T Consensus 11 ~~~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~av 90 (422)
T COG0738 11 VKLAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAV 90 (422)
T ss_pred ceeHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHH
Confidence 34556667777788888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH---hhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhc---
Q 010744 119 STAAVG---ASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQ--- 192 (502)
Q Consensus 119 ~~~~~~---~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~--- 192 (502)
++.++. -..+|..++++-++.|.|.+...++.+.++....++++-.+.+++.+..+++|.+++|++++.+..+.
T Consensus 91 g~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~ 170 (422)
T COG0738 91 GAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVAL 170 (422)
T ss_pred HHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhh
Confidence 999984 56889999999999999999999999999999999999999999999999999999999999987620
Q ss_pred -----------ccCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHH
Q 010744 193 -----------FWGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMA 261 (502)
Q Consensus 193 -----------~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (502)
......||++|...+...+++.+...... -|..+...+++ .+.++ ..
T Consensus 171 ~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k-~p~~~~~~~~~-------------------~~~~~--~~ 228 (422)
T COG0738 171 TMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSK-LPDLQVAAPSL-------------------GASGS--AG 228 (422)
T ss_pred ccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcc-CCcCCcccccc-------------------ccccc--ch
Confidence 01123588999988877666666555432 12111111100 00000 03
Q ss_pred HhhhcchhHHHHHHHHHHhhhhhhhhH-HHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcch
Q 010744 262 TKAVIKVPTFQIIVLQGIVGSLPWTAM-VFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGR 339 (502)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~ 339 (502)
..+++++|.++...+..+++.+.-... +|++.|+.+ .|.+..+++...+....+.++|++++.++.+|+...|..
T Consensus 229 ~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~L--- 305 (422)
T COG0738 229 LSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYL--- 305 (422)
T ss_pred HHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH---
Confidence 445788899999888888877765555 899999998 899999999999999999999999999999999887631
Q ss_pred hHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhh
Q 010744 340 VMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSS 419 (502)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~ 419 (502)
....++...++....+ .++ .+.....++.|++++..+| ...+...+..| ++...+.+ ...+...|++
T Consensus 306 ----af~a~~~ill~~~~~l----~~g--~v~~~~l~~ig~F~simfP-TIfslal~~l~-~~ts~~s~-~l~maivGGA 372 (422)
T COG0738 306 ----AFYALIAILLLLAVAL----IGG--VVALYALFLIGLFNSIMFP-TIFSLALKNLG-EHTSVGSG-LLVMAIVGGA 372 (422)
T ss_pred ----HHHHHHHHHHHHHHHH----hcC--hHHHHHHHHHHHHhHHHHH-HHHHHHHhccC-ccccccce-eeeeheecch
Confidence 1111111111111111 112 2344567788999999998 78888888888 44434444 4466688999
Q ss_pred hhHHHHHHHHHHhc
Q 010744 420 FAAPLVGILSEKMF 433 (502)
Q Consensus 420 ~~~~~~g~l~~~~~ 433 (502)
+-|.+.|++.|..+
T Consensus 373 iiP~l~G~i~d~~g 386 (422)
T COG0738 373 IIPPLQGVIADMFG 386 (422)
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999999974
No 79
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.97 E-value=1.3e-28 Score=241.54 Aligned_cols=348 Identities=14% Similarity=0.083 Sum_probs=222.0
Q ss_pred HHHHHHHHhhhhchhhHHH-HHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHH--
Q 010744 48 LAAIMERADENLLPSVYKE-VSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVG-- 124 (502)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~-- 124 (502)
+..++.........+.+|. +.+++|+++.++|++.+++.++..++++++|+++||+|||++++++..+.+++.....
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 96 (420)
T PRK09528 17 LFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIY 96 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444555554 5556999999999999999999999999999999999999999887766655543221
Q ss_pred -hhhH-----HHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCccc
Q 010744 125 -ASQH-----FLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPG 198 (502)
Q Consensus 125 -~~~~-----~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~ 198 (502)
.++. ....++++++.|.+.....+....+..+ . ++++++.+|......++|..++|++++.+.+ .+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~------~~ 168 (420)
T PRK09528 97 VFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFN------IN 168 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHh------cC
Confidence 1111 1112233344443333333333333322 2 3567888999999999999999999999876 58
Q ss_pred chHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHH
Q 010744 199 WRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQG 278 (502)
Q Consensus 199 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (502)
|+++|++.+++.++..++.++..+++++..... ++++ .+ +++. ..++.++.+|+|.++...+..
T Consensus 169 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---------~~--~~~~----~~~~~~~~l~~~~~~~l~l~~ 232 (420)
T PRK09528 169 PQINFWLGSGSALILLVLLFFAKPDAPSTAKVA-NALG---------AN--ASAV----SLKDALALLKLPKFWFLVLYV 232 (420)
T ss_pred chHhHHHHHHHHHHHHHHHhcccccccchhhhc-cchh---------cc--cccc----cHHHHHHHccCCCeEeehHHH
Confidence 999999988888777666666555443321111 0000 00 0011 122334567777766555544
Q ss_pred HhhhhhhhhH-HHHHHHHHH----hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhH
Q 010744 279 IVGSLPWTAM-VFFTMWFEL----IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPF 353 (502)
Q Consensus 279 ~~~~~~~~~~-~~~~~~~~~----~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 353 (502)
+.....+... .+.|.|+.+ .+.+..+.+.+.+...++..++.++.|++.||+++|+... .+.++..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~-------~~~~l~~-- 303 (420)
T PRK09528 233 IGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALL-------LAGTIMA-- 303 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhH-------HHHHHHH--
Confidence 3333333333 456666654 3566677888888888889999999999999999998421 1111111
Q ss_pred HHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHH-HHHhhhhhhhhhHHHHHHHHHHh
Q 010744 354 SWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAF-DRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~-~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
+........++. +.+....++.|++.+...+ ....++.|.+|++.+++..+. .+....+|..++|.+.|++.|..
T Consensus 304 --~~~~l~~~~~~~-~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~ 379 (420)
T PRK09528 304 --VRIIGSGFATGP-LEVSILKLLHAFEVPFLLV-GVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSI 379 (420)
T ss_pred --HHHHHHHhcccH-HHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhh
Confidence 111111112222 3344555566666655444 456778888999999888766 57778899999999999999985
No 80
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.97 E-value=1.8e-28 Score=235.45 Aligned_cols=323 Identities=15% Similarity=0.147 Sum_probs=233.0
Q ss_pred hhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhc-----CCchh-HHHHHHHHHHHHHHHHhh---hH
Q 010744 58 NLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINY-----DRPAV-LTIGILCWAFSTAAVGAS---QH 128 (502)
Q Consensus 58 ~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~~---~~ 128 (502)
...++..|.+.+|+|+|.+++|+..+. .+...+ .+++|++.||+ ||||. ++.+.++.++...+.++. .+
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~ 82 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTD 82 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 456778999999999999999999765 555555 89999999998 89996 567788888887777776 56
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCccc--------ch
Q 010744 129 FLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPG--------WR 200 (502)
Q Consensus 129 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~--------wr 200 (502)
.+.+....++.+++.+...++..+++.|++|+|+|+++.++...+..+|.++++.+++.+.+. .+ ||
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~-----~g~~~~~~~~wr 157 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASP-----EFANTGLITLWG 157 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhh-----cccccccccccH
Confidence 677788888899999999999999999999999999999999999999999999999998876 55 99
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhH---HHHHHHH
Q 010744 201 CAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPT---FQIIVLQ 277 (502)
Q Consensus 201 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 277 (502)
.+|++.+++.++..+..++..||+++..+.+ + ...++..+..+++++++. ++...+.
T Consensus 158 ~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~~---------~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (356)
T TIGR00901 158 YIFFWTALLILPGLLVTLFLAKEPQEDASVP---------K-----------PLTQAVLKPIREFFQRKNMIQALLLLLL 217 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCcccccc---------h-----------hHHHHHHHHHHHHHHhcCchHHHHHHHH
Confidence 9999999887776666565555543211000 0 000112233445555553 5555444
Q ss_pred HHhhhhhh-hhHHHHHHHHHHhCCChhhHHHHHHHHH-hhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHH
Q 010744 278 GIVGSLPW-TAMVFFTMWFELIGFDHSSTAALLSLFA-IGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSW 355 (502)
Q Consensus 278 ~~~~~~~~-~~~~~~~~~~~~~g~s~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~ 355 (502)
.++....+ ....+.|.|++++|+++.+.+.+....+ +..+++.++++++.||+|+|+.. ..+.++......
T Consensus 218 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l-------~~~~~~~~~~~~ 290 (356)
T TIGR00901 218 IVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYAL-------LLFGIVQALTNA 290 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHH-------HHHHHHHHHHHH
Confidence 44444433 3447899999889999999998887665 57788999999999999988731 111111111111
Q ss_pred HHhhhccCCc------chhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhh
Q 010744 356 FLLTAIPQSV------SNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEG 415 (502)
Q Consensus 356 ~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~ 415 (502)
.......... +..+.+....++.+++.+...+ ...++..|.+|+++||+..|+.+...+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 291 GFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTV-AFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHH-HHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 1111111110 1234445556666777777777 689999999999999999999987654
No 81
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.97 E-value=2.4e-27 Score=231.05 Aligned_cols=347 Identities=17% Similarity=0.136 Sum_probs=238.1
Q ss_pred HHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhc-----CCch-hHHHHHHHHHHHH
Q 010744 47 NLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINY-----DRPA-VLTIGILCWAFST 120 (502)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-----Grr~-~l~~~~~~~~~~~ 120 (502)
...++..+.........+|.+.++.|.+.+++|++..+... .+..+++|+++||+ |||| ++.++.++.+++.
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~ 82 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASI 82 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHH
Confidence 34456667777778888999999999999999999777665 58999999999999 8876 7888888888888
Q ss_pred HHHHhh---hHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcc
Q 010744 121 AAVGAS---QHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVP 197 (502)
Q Consensus 121 ~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~ 197 (502)
.+.++. ++++.+++..++.++..+...++..+++.|++|+|||+++.++...+..+|.++++.++..+.+. ..
T Consensus 83 ~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~----~~ 158 (402)
T PRK11902 83 AAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADR----VL 158 (402)
T ss_pred HHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhc----cc
Confidence 887776 45788888888889988999999999999999999999999999999999999999999998874 14
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHH
Q 010744 198 GWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQ 277 (502)
Q Consensus 198 ~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (502)
|||..|++.+++.++..+..+ ..|||+...++. + ...++..+..++++|+|.++..++.
T Consensus 159 gw~~~f~i~a~~~l~~~l~~~-~~~e~~~~~~~~---~-----------------~~~~~~~~~~~~l~~~~~~~~~l~~ 217 (402)
T PRK11902 159 GWGNTYLLMAGLMLAGALTTL-WAPEPEVPARPP---R-----------------SLGEAVVGPLRDFFSRRGAWALLLL 217 (402)
T ss_pred CHHHHHHHHHHHHHHHHHHHH-hcCCCccccccc---c-----------------hhHHHHHHHHHHHHhCcCHHHHHHH
Confidence 999999999887766555443 344443211110 0 0001223455668888888776665
Q ss_pred HHhhhhhhh-hHHHHHHHH-HHhCCChhhHHHHHHHHH-hhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHH
Q 010744 278 GIVGSLPWT-AMVFFTMWF-ELIGFDHSSTAALLSLFA-IGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFS 354 (502)
Q Consensus 278 ~~~~~~~~~-~~~~~~~~~-~~~g~s~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 354 (502)
.++...... ...+.+.++ +++|+++.+.+++....+ ++.+++.++++++.||+++|+.. ..+..+.....
T Consensus 218 ~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l-------~~~~~~~~l~~ 290 (402)
T PRK11902 218 IVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSL-------MLFGVLQAVSN 290 (402)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHH-------HHHHHHHHHHH
Confidence 544433222 223444444 449999999999876654 46788999999999999988731 11111111111
Q ss_pred HHHhhhccCCcchhHHHHHHH----HHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHH
Q 010744 355 WFLLTAIPQSVSNYYTYAVTL----VLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSE 430 (502)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~ 430 (502)
+.+......++..+.+.... +..|++.+.... ....++++.+|. +..++.+....+++.+++.+.|.+.|
T Consensus 291 -l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~G~l~~ 364 (402)
T PRK11902 291 -LGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVA-LLMALCNRSFSA----TQYALLSALASVGRVYVGPTSGYLVE 364 (402)
T ss_pred -HHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCCCcH----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111111122222222 234444444444 455666666554 44556666667777766778999999
Q ss_pred Hhc
Q 010744 431 KMF 433 (502)
Q Consensus 431 ~~~ 433 (502)
..|
T Consensus 365 ~~G 367 (402)
T PRK11902 365 AYG 367 (402)
T ss_pred HhC
Confidence 963
No 82
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.97 E-value=8.7e-28 Score=240.55 Aligned_cols=382 Identities=14% Similarity=0.134 Sum_probs=255.4
Q ss_pred hHHHHHHHHHHHHHHHHh--hhhchhhHHHHHhhcCC---CC----CCchHHHHHHHHHHhhhcchhhhhhhhcCCchhH
Q 010744 39 ISLSLILINLAAIMERAD--ENLLPSVYKEVSEAFNA---GP----SDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVL 109 (502)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~---s~----~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l 109 (502)
.........+..+..+++ ....+++...+.++... .. .+.+|+.+.+.++.+++++++|+++|++|||+.+
T Consensus 43 ~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l 122 (513)
T KOG0254|consen 43 VILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTL 122 (513)
T ss_pred hHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 334444455555666665 45666777777765321 22 2348999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHh
Q 010744 110 TIGILCWAFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMA 189 (502)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~ 189 (502)
+++.+++.++.+++++++|+++++++|+++|+|.|+.....+.+++|..|++.||...+..+....+|..++..++....
T Consensus 123 ~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~ 202 (513)
T KOG0254|consen 123 LLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTS 202 (513)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999955554443
Q ss_pred hhcccCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHH------------
Q 010744 190 GHQFWGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLE------------ 257 (502)
Q Consensus 190 ~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 257 (502)
+. +.+||..+.+..+.+++..+..++.||+|++..++++.++.+..........+++......+
T Consensus 203 ~~----~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~ 278 (513)
T KOG0254|consen 203 KV----YAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVA 278 (513)
T ss_pred cC----CccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcc
Confidence 21 14899999999999999888867777788887765533332222111111000000000000
Q ss_pred ----hHHHHh-hhcchhHHHHHHHHHHhhhhhhhhH-HHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhc
Q 010744 258 ----SWMATK-AVIKVPTFQIIVLQGIVGSLPWTAM-VFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRIS 331 (502)
Q Consensus 258 ----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g 331 (502)
.+.+.. +..+++......+..+.+...+... .|.+.+++..|.+... .......++..+++.+++..+.||+|
T Consensus 279 ~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~g 357 (513)
T KOG0254|consen 279 EGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFG 357 (513)
T ss_pred cccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 001111 1222233434444444444443333 6788888887776443 44455567777788888899999999
Q ss_pred cccCCcchhHHhhhhhhhhhhHHHHHhhhccC------CcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhh
Q 010744 332 QAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQ------SVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTM 405 (502)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~ 405 (502)
||+.. +....++.++............. ...........++...+..+. .++.+.+..|.+|.+.|+.
T Consensus 358 Rr~ll----l~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~--g~v~w~~~sEifp~~~r~~ 431 (513)
T KOG0254|consen 358 RRKLL----LFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGW--GPVPWVIVSEIFPLRLRSK 431 (513)
T ss_pred cHHHH----HHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhccc--ccchhhhhhccCcHhHHhh
Confidence 99852 23333333333333333222211 112222233333333333333 3356778999999999999
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHHHHH
Q 010744 406 IYAFDRAFEGSFSSFAAPLVGILSEK 431 (502)
Q Consensus 406 ~~g~~~~~~~~~~~~~~~~~g~l~~~ 431 (502)
+.++....+.+...+-....-.+.+.
T Consensus 432 ~~s~~~~~n~~~~~~v~~~~~~~~~~ 457 (513)
T KOG0254|consen 432 GASLAVAVNWLWNFLISFFFPFITEA 457 (513)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999988877655555555554
No 83
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=7.2e-28 Score=213.29 Aligned_cols=372 Identities=15% Similarity=0.086 Sum_probs=261.5
Q ss_pred cccchhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHH
Q 010744 34 RKVLGISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGI 113 (502)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 113 (502)
...+.+|........+...+.+.....+.+.|...+.+|.+..+..++......+..+++..||..+|++|||+...+..
T Consensus 71 gfgrfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~ 150 (528)
T KOG0253|consen 71 GFGRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTF 150 (528)
T ss_pred CcccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhH
Confidence 34567777777777777777777677788889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcc
Q 010744 114 LCWAFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQF 193 (502)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~ 193 (502)
+..++..++.+.++|+.++.+.|.+.|+|.|+ .|...++-.|.-|..+|..-+-.. ..+.+|.+....+...+...
T Consensus 151 l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~-- 226 (528)
T KOG0253|consen 151 LVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSN-- 226 (528)
T ss_pred HHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHh--
Confidence 99999999999999999999999999999999 888889999999999998887777 99999999999999999888
Q ss_pred cCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcC-----------------------CC
Q 010744 194 WGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGN-----------------------TS 250 (502)
Q Consensus 194 ~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~ 250 (502)
.||||.......+..+.+....+.+|+|+....+++++++-....+..+.++ ++
T Consensus 227 ---~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~ 303 (528)
T KOG0253|consen 227 ---FGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDD 303 (528)
T ss_pred ---hhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhh
Confidence 8999999999988888888899999999887666533222111111111000 00
Q ss_pred cc-hhHHHhHHHHh----hhcchhHHHHHHHHHHhhhhhhhhHHHHHHHHHHh--------------------CCChhhH
Q 010744 251 VS-SVWLESWMATK----AVIKVPTFQIIVLQGIVGSLPWTAMVFFTMWFELI--------------------GFDHSST 305 (502)
Q Consensus 251 ~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------g~s~~~~ 305 (502)
.+ +.-++...... .-++...+....+.+......++...+.....+.. ..+...-
T Consensus 304 ~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~d 383 (528)
T KOG0253|consen 304 SKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKD 383 (528)
T ss_pred hhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhH
Confidence 00 00011111111 22233333333332222222233322222222211 1111122
Q ss_pred HHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhh
Q 010744 306 AALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWN 385 (502)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 385 (502)
-.=..+..+..+.|.++.+++.||+|||+.+. .+.+++.+ ..+........+ .+.+.++..-++....
T Consensus 384 YrdllitslaefPGlLIt~~iverlGRKkTMa-------l~l~~f~i---flfll~~c~~rn--~~tvllf~arafisg~ 451 (528)
T KOG0253|consen 384 YRDLLITSLAEFPGLLITGVIVERLGRKKTMA-------LSLILFGI---FLFLLTTCKTRN--AYTVLLFTARAFISGA 451 (528)
T ss_pred HHHHHHHHHhhCCchhHHHHHHHHhcchhHHH-------HHHHHHHH---HHHHHHHhcCcc--hhHHHHHHHHHHHhch
Confidence 22234567889999999999999999998631 11111111 111111111111 1233444455556666
Q ss_pred ccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHH
Q 010744 386 ATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLV 425 (502)
Q Consensus 386 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~ 425 (502)
+. ..+.|..|++|+..|+++.|....+..+|+.+.|.++
T Consensus 452 fq-vaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 452 FQ-VAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred he-EEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH
Confidence 66 7899999999999999999999999999999999998
No 84
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.96 E-value=2.3e-27 Score=261.86 Aligned_cols=347 Identities=16% Similarity=0.089 Sum_probs=244.8
Q ss_pred hhhhchhhHHHHHhhcCCCCC--CchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHH---hhhHHH
Q 010744 56 DENLLPSVYKEVSEAFNAGPS--DLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVG---ASQHFL 130 (502)
Q Consensus 56 ~~~~~~~~~~~i~~~~~~s~~--~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~~~~~ 130 (502)
+......+.+.+..+++.+.+ ..+++.+++.+++.++++++|+++||+|||++++++.++.++..++.. .+++++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~ 104 (1146)
T PRK08633 25 DLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFW 104 (1146)
T ss_pred HHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHH
Confidence 334445566677777776544 478999999999999999999999999999999999877666655444 457899
Q ss_pred HHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcc----cCcccchHHHHHH
Q 010744 131 HVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQF----WGVPGWRCAFILM 206 (502)
Q Consensus 131 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~----~~~~~wr~~f~~~ 206 (502)
.++++|+++|++.+...++..+++.|++|+++|++++++.+.+..+|.++|+++++++..... ....+|++.+.+.
T Consensus 105 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 184 (1146)
T PRK08633 105 LAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLV 184 (1146)
T ss_pred HHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999876300 0012455555554
Q ss_pred HHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhh-
Q 010744 207 ATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLPW- 285 (502)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 285 (502)
.+...++.++..+..++.+.......+ + ......++.....+.+++++.++..++..++.....
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 249 (1146)
T PRK08633 185 LLAVAVLGLIFAYRLPKVPAAAPEVFD-K--------------KKYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQ 249 (1146)
T ss_pred HHHHHHHHHHHHhcCcCCCCCCccccc-c--------------cccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 444433333333333332211111000 0 000111233445666778888777666555544433
Q ss_pred hhHHHHHHHHHH-hCCChh-hHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccC
Q 010744 286 TAMVFFTMWFEL-IGFDHS-STAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQ 363 (502)
Q Consensus 286 ~~~~~~~~~~~~-~g~s~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (502)
....++|.|+++ +|++.. ..+++.+...++.+++.++.+++.||+++++... ++.++... ..+.+ ..
T Consensus 250 ~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~-------~~~~~~~~-~~~~~---~~ 318 (1146)
T PRK08633 250 LAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVP-------LGALGLAL-SLFLL---PT 318 (1146)
T ss_pred HHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchh-------HHHHHHHH-HHHHH---HH
Confidence 334678888876 899988 8999999999999999999999999998876421 11111111 11111 11
Q ss_pred CcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHH
Q 010744 364 SVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSE 430 (502)
Q Consensus 364 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~ 430 (502)
.. ..+...+..+++|++.+...+ ...+++.+..|++.||+++|+.+.+.+++..+++.+.+.+..
T Consensus 319 ~~-~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~ 383 (1146)
T PRK08633 319 AP-SLASVLVLFFLFGFSAGLFIV-PLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG 383 (1146)
T ss_pred hh-hHHHHHHHHHHHHHHHHHhhH-HHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 234455667778888877766 578888899999999999999999999998888877766654
No 85
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=2e-29 Score=226.19 Aligned_cols=319 Identities=16% Similarity=0.161 Sum_probs=242.7
Q ss_pred CCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHH
Q 010744 73 AGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQS 152 (502)
Q Consensus 73 ~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 152 (502)
-+.+++|++.+.+.+.+.+.+++.|.+.||+|+|..+++|+.+...+++++++.+++++++++|.+||+|.+...++..+
T Consensus 103 ~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsgla 182 (464)
T KOG3764|consen 103 RENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLA 182 (464)
T ss_pred ccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHH
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCC-cchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCC
Q 010744 153 FIADSYKDGV-RGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTF 231 (502)
Q Consensus 153 ~i~~~~~~~~-r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (502)
+++|.+|+++ |++++|+.-.+.++|..+||++|+.+++. .|.+.+|++.++++++-..+.+++.+..+...+..
T Consensus 183 mlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~-----~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~~ 257 (464)
T KOG3764|consen 183 MLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEF-----AGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPDST 257 (464)
T ss_pred HHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhh-----cCCcCcHHHHHHHHHHHHHHHHheeCccccCcccc
Confidence 9999998765 79999999999999999999999999998 99999999999999999998888776543332111
Q ss_pred CCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhhhhH-HHHHHHHHH-hCCChhhHHHHH
Q 010744 232 HGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLPWTAM-VFFTMWFEL-IGFDHSSTAALL 309 (502)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~g~s~~~~~~~~ 309 (502)
+...++++++++|..+.............+.. --++.++.+ +..+..+.|+.+
T Consensus 258 -------------------------~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~f 312 (464)
T KOG3764|consen 258 -------------------------EQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAF 312 (464)
T ss_pred -------------------------ccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeee
Confidence 11123445778888877766655555555554 346666655 665555899999
Q ss_pred HHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCC
Q 010744 310 SLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAA 389 (502)
Q Consensus 310 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 389 (502)
....+...++..+.|.+.||+++.+. .+. +.++..........+.... +..+.+.....+++.+.... .
T Consensus 313 Lp~~~~y~ig~~lfg~la~k~~~~~w------l~~---~~gl~~~G~~~~~iP~~~~-~~~L~vp~~~l~~~i~~~da-s 381 (464)
T KOG3764|consen 313 LPASLSYAIGTNLFGKLADKYPHLRW------LLS---LGGLATVGVSSGPIPFATS-IAQLWVPNFGLGFGIGLADA-S 381 (464)
T ss_pred cccccchhccCchHHHHHHhcCchhH------HHH---HHHHHHHHHHhchhHhhhh-HHHHhhhhHHHHHHHHHHHH-H
Confidence 99999999999999999999995442 111 1111111122222222222 23343444444444444333 2
Q ss_pred C---ccchhcccCCC---chhhHHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 390 N---GPMFAEVVPAK---HRTMIYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 390 ~---~~~~~~~~p~~---~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
+ ..+..|....+ .-|..+++......++.++||.++|.+.+..
T Consensus 382 l~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~i 430 (464)
T KOG3764|consen 382 LIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAI 430 (464)
T ss_pred HhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeeh
Confidence 2 22333333333 5689999999999999999999999999986
No 86
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.96 E-value=1.6e-27 Score=235.57 Aligned_cols=364 Identities=13% Similarity=0.134 Sum_probs=252.9
Q ss_pred hhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhh----cCCch-hHHHHHHHHHHHHHHHHhhhH------HH
Q 010744 62 SVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVIN----YDRPA-VLTIGILCWAFSTAAVGASQH------FL 130 (502)
Q Consensus 62 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~~~~------~~ 130 (502)
...+.+.+++|+++.++|++.++..+..++..|+.|+++|| +|||| .++.+....+++.+++.+.++ ..
T Consensus 21 ~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~ 100 (437)
T TIGR00792 21 YLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLV 100 (437)
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHH
Confidence 45667788899999999999999999999999999999998 67755 677888888888888776653 45
Q ss_pred HHHHHHHHHhhhhhhhhhhhHHHHhhcc-CCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcc--cCcccchHHHHHHH
Q 010744 131 HVGMWRAVNGFGLAIVIPALQSFIADSY-KDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQF--WGVPGWRCAFILMA 207 (502)
Q Consensus 131 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~--~~~~~wr~~f~~~~ 207 (502)
.+++.+++.+++.+...+...++..|.. ++++|++..++.+.+..+|..+++.+.+.+..... .+..+||+.+.+.+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~ 180 (437)
T TIGR00792 101 YAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLA 180 (437)
T ss_pred HHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHH
Confidence 6778889999998888888888999987 46899999999999999998888877766654211 12368999999999
Q ss_pred HHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhhhh
Q 010744 208 TLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLPWTA 287 (502)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (502)
+++++..++.++..+|+++....+ + +++. +..+..+.++++|.++...+..++....+..
T Consensus 181 ~l~~~~~~~~~~~~~e~~~~~~~~----~-------------~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (437)
T TIGR00792 181 LIGVVSLIICFFGTKERYSEIPKN----I-------------EKKL---SLKQIFKALFKNDQLLILCLAYLFYNLAFNI 240 (437)
T ss_pred HHHHHHHHHHHcCCEecCCCCCcc----c-------------ccCC---CHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 988888777766666543110000 0 0000 1223456678888888777666665554444
Q ss_pred H-HHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCc
Q 010744 288 M-VFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSV 365 (502)
Q Consensus 288 ~-~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (502)
. .+.+.|.+. .+ ++...+.+.....++.+++.++.+++.||+|+|+.. ..+..+..... +......
T Consensus 241 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~-------~~~~~~~~~~~-~~~~~~~--- 308 (437)
T TIGR00792 241 KNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILF-------AGGILLMVLGY-LIFFFAG--- 308 (437)
T ss_pred HcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH-------HHHHHHHHHHH-HHHHHcc---
Confidence 4 345555554 45 456677777777899999999999999999988732 12222211111 1111111
Q ss_pred chhHHHHHHHHHHHHHHhhhccCCCccchhcccC-------CCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcCCCCC
Q 010744 366 SNYYTYAVTLVLMGLTISWNATAANGPMFAEVVP-------AKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFGYDSK 438 (502)
Q Consensus 366 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~ 438 (502)
+..+...+..++.|++.+...+ ...++.+|..+ ++.+|.+.|+.+.+..++..+++.+.|.+.+. .+|+..
T Consensus 309 ~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~-~G~~~~ 386 (437)
T TIGR00792 309 SNLPLILVLIILAGFGQNFVTG-LVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGI-IGYVAN 386 (437)
T ss_pred hhHHHHHHHHHHHHHHHHHHHH-HHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCcC
Confidence 1223344555666777766665 56777777654 56689999999999999999999999999998 456421
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHH
Q 010744 439 AIDPVMGSPREALALSRGLLSMMAV 463 (502)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (502)
....+....+++..+....++
T Consensus 387 ----~~~~~~~~~~~~~~~~~~p~i 407 (437)
T TIGR00792 387 ----AAQSPITLNGIKILMFAVPAL 407 (437)
T ss_pred ----CcCCHHHHHHHHHHHHHHHHH
Confidence 112233344455444444444
No 87
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.96 E-value=4.7e-27 Score=228.79 Aligned_cols=351 Identities=11% Similarity=0.064 Sum_probs=237.1
Q ss_pred HHHHHHHHHHHhhhhchhhHHHH-HhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHH
Q 010744 45 LINLAAIMERADENLLPSVYKEV-SEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAV 123 (502)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 123 (502)
.+...+++.........+.+|.+ .+++|.++.+.|++.+++.++..+++++.|+++||+|||+.++.+....+++....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~ 85 (396)
T TIGR00882 6 MFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPF 85 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 34444555566656666677665 56799999999999999999999999999999999999999988777666544332
Q ss_pred ---Hhh-----hHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccC
Q 010744 124 ---GAS-----QHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWG 195 (502)
Q Consensus 124 ---~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~ 195 (502)
.+. +.+..+++.|++.|++.+...+....+..|.. ++++..+|......++|.++||.+++.+.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~----- 158 (396)
T TIGR00882 86 FIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS----- 158 (396)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-----
Confidence 122 23344567789999998888888888777753 345667788888899999999999998865
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHH
Q 010744 196 VPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIV 275 (502)
Q Consensus 196 ~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (502)
.+||++|++.+++.++..++.+...|++++++... + +. +.+ +++ +..++.++++|+|.++...
T Consensus 159 -~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~--------~~~-~~~----~~~~~~~~~l~~~~~~~~~ 221 (396)
T TIGR00882 159 -IDPQIVFWLGSGFALILMLLLMFAKPKAPSSATVA--N-AL--------GAN-ASA----FSLKLALELFRQRKFWMFV 221 (396)
T ss_pred -cCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhhh--c-cc--------ccc-cCC----CCHHHHHHHHcCCcHHHHH
Confidence 69999999998888877766665555443211110 0 00 000 000 1112345677888877665
Q ss_pred HHHHhhhhhhhhH-HHHHHHHHH-h---CCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhh
Q 010744 276 LQGIVGSLPWTAM-VFFTMWFEL-I---GFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMG 350 (502)
Q Consensus 276 ~~~~~~~~~~~~~-~~~~~~~~~-~---g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 350 (502)
+..+.....+... .+.|.|+++ + +.+....+...+...+...++.+..+++.||+++|+.. ..+..+.
T Consensus 222 l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l-------~~~~~l~ 294 (396)
T TIGR00882 222 LYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNAL-------LIAGTIM 294 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhH-------HHHHHHH
Confidence 5544444444433 567777766 2 45566778888888888888999999999999999742 1111111
Q ss_pred hhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHH-HHHhhhhhhhhhHHHHHHHH
Q 010744 351 IPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAF-DRAFEGSFSSFAAPLVGILS 429 (502)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~-~~~~~~~~~~~~~~~~g~l~ 429 (502)
. +.........+ .+.+....++.|++...... ....+..+..|++.++++.+. .+....+|+.++|.+.|++.
T Consensus 295 ~----l~~~~~~~~~~-~~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~ 368 (396)
T TIGR00882 295 S----VRIIGSSFATT-ALEVVILKMLHAFEVPFLLV-GCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMY 368 (396)
T ss_pred H----HHHHHHHhcCC-hHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHH
Confidence 1 11111111222 22234455566666544433 344566677788888887766 57888999999999999999
Q ss_pred HHh
Q 010744 430 EKM 432 (502)
Q Consensus 430 ~~~ 432 (502)
|..
T Consensus 369 ~~~ 371 (396)
T TIGR00882 369 DSI 371 (396)
T ss_pred Hhc
Confidence 985
No 88
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.96 E-value=1.7e-26 Score=228.13 Aligned_cols=379 Identities=12% Similarity=0.050 Sum_probs=244.6
Q ss_pred HHHHHHHHHHHHHHHhhhhch-hhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhh-cCCchhHHHHHHHHHH
Q 010744 41 LSLILINLAAIMERADENLLP-SVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVIN-YDRPAVLTIGILCWAF 118 (502)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~ 118 (502)
+.+..+++..+...+..+... .+...+.+++|.+.++.+++.+.+.....+..+++|+++|| +||||+++++.+++++
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~ 93 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAI 93 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHH
Confidence 334455555566666655444 45556678899999999999999998888889999999999 9999999999999999
Q ss_pred HHHHHHhhhHHHH-HHHHHHHHhhhhhhhhhhhHHHHhhccCCC--CcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccC
Q 010744 119 STAAVGASQHFLH-VGMWRAVNGFGLAIVIPALQSFIADSYKDG--VRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWG 195 (502)
Q Consensus 119 ~~~~~~~~~~~~~-l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~ 195 (502)
+.++++++++... ++++|+++|+|.|...|...+++.|++|++ +|+++++++..+.++|.++||.+++++.++
T Consensus 94 g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~---- 169 (489)
T PRK10207 94 GYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADK---- 169 (489)
T ss_pred HHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHh----
Confidence 9999999876554 558999999999999999999999999887 457899999999999999999999999988
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHh--------------hhcCCCcchh-------
Q 010744 196 VPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELV--------------EKGNTSVSSV------- 254 (502)
Q Consensus 196 ~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~------- 254 (502)
.|||+.|++.++ +++..++.+...++..+.... ++++++.|..... ..........
T Consensus 170 -~gw~~~F~i~~i-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (489)
T PRK10207 170 -FGYSVTYNLCGA-GLIIALLVYFACRGMVKDIGS-EPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLS 246 (489)
T ss_pred -hChHHHHHHHHH-HHHHHHHHHHHcchhhcccCC-CCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 899999999654 444444444333322111110 0111111111100 0000000000
Q ss_pred -------HHHhHHHHhhhcchhHHHHHHHH--HHhhhhhhhhH-HHHHHHHHH-hCCCh----hhHHHHHHHHHhhhccc
Q 010744 255 -------WLESWMATKAVIKVPTFQIIVLQ--GIVGSLPWTAM-VFFTMWFEL-IGFDH----SSTAALLSLFAIGCAVG 319 (502)
Q Consensus 255 -------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~-~g~s~----~~~~~~~~~~~~~~~~~ 319 (502)
..+. +..++.+|+|.+....+. ....+..+... +.++.+.++ .+.+. .....+.+...+..++.
T Consensus 247 ~i~~~~f~~~~-~~~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~ 325 (489)
T PRK10207 247 IVVTIIFFREA-FKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVA 325 (489)
T ss_pred HHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHH
Confidence 0000 111235555655544332 22333334444 556777764 22211 12234444455566677
Q ss_pred ccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHH-----hhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccch
Q 010744 320 SFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFL-----LTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMF 394 (502)
Q Consensus 320 ~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 394 (502)
.++.+++.||+++|+.......-...+.++........ .........+.+......++.|++.....+ ....++
T Consensus 326 ~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~-~g~~~~ 404 (489)
T PRK10207 326 SPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISA-LGLAMI 404 (489)
T ss_pred HHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhH-HHHHHH
Confidence 77789999999988631111111112222211111110 111111122234456778889999998888 678888
Q ss_pred hcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHH
Q 010744 395 AEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGIL 428 (502)
Q Consensus 395 ~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l 428 (502)
.+..|++.+|.++|+.+...++|+.++..+....
T Consensus 405 ~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 405 AALVPQHLMGFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8889999999999999999999888887776544
No 89
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.96 E-value=4.7e-28 Score=221.27 Aligned_cols=388 Identities=15% Similarity=0.092 Sum_probs=256.2
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcC--------CCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCch
Q 010744 36 VLGISLSLILINLAAIMERADENLLPSVYKEVSEAFN--------AGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPA 107 (502)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--------~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~ 107 (502)
.++....+.+...+.+.+.+|...++.+.|.+...|. .++...+.+..+..+|.++||++.|+++||+|||+
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~ 115 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKK 115 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchh
Confidence 4556677788888999999999999999998887652 33445778889999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhh-------HHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhH
Q 010744 108 VLTIGILCWAFSTAAVGASQ-------HFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIG 180 (502)
Q Consensus 108 ~l~~~~~~~~~~~~~~~~~~-------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 180 (502)
++...+++..+++++++++. -.+++...|++.|+|.|+-+|...+..+|....++||...+.+.+..+.|...
T Consensus 116 vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gila 195 (538)
T KOG0252|consen 116 VYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILA 195 (538)
T ss_pred hhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhh
Confidence 99999999999999888752 25778899999999999999999999999999999999999998888888888
Q ss_pred HHHHHHHHhhhcc---cC-------cccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCC------CCCCCchhhHh
Q 010744 181 GGVLATIMAGHQF---WG-------VPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHG------TGENFDRDELV 244 (502)
Q Consensus 181 g~~~~~~l~~~~~---~~-------~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 244 (502)
|.+++-.+..... .. +.-||..|.+.+++++++....+.++|+++......++ |.++.......
T Consensus 196 G~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~ 275 (538)
T KOG0252|consen 196 GGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIE 275 (538)
T ss_pred ccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccc
Confidence 8877766543211 11 13499999999999888888888888776655211100 00000000000
Q ss_pred -----hhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhh-hhhhHHHHHHHHHHhCCChhhHHH--------HHH
Q 010744 245 -----EKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSL-PWTAMVFFTMWFELIGFDHSSTAA--------LLS 310 (502)
Q Consensus 245 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~s~~~~~~--------~~~ 310 (502)
....+.++...+...+.+.+. .-+.+.......+..-. .+....+...+++..|+.+.+... ...
T Consensus 276 ~~~~~~~~~~~~~~~~~~F~~~f~~~-hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~ 354 (538)
T KOG0252|consen 276 AESTAESDVPPPSNSFGLFSRLFLRW-HGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNL 354 (538)
T ss_pred hhhccccCCCCcccccchHHHHHHHH-HHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHH
Confidence 011111111111111111111 11222222222233222 233335667777766665543322 222
Q ss_pred -HHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCC
Q 010744 311 -LFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAA 389 (502)
Q Consensus 311 -~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 389 (502)
+...+.+.|..+...++|++||++. .+.+.++..++..++-.......+ .....+...+..+.........
T Consensus 355 iia~~~~vPGyw~tv~~id~iGRk~i-------q~~GF~~~~i~~~~~~~~y~~~~~-~~Gf~v~y~l~~ff~NFGPn~t 426 (538)
T KOG0252|consen 355 IIAVCSTVPGYWFTVYFIDIIGRKYI-------QLMGFFIMTIFFFVIAGPYNQLEN-TIGFVVLYSLTFFFGNFGPNAT 426 (538)
T ss_pred HHHHHccCCceeEEEEEeehhhhHHH-------HHhhHHHHHHHHHHHcCCcccccc-cCceeehHHHHHHHHhcCCCce
Confidence 3344556688899999999999984 223333322222222211111111 1112233333444444444435
Q ss_pred CccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 390 NGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 390 ~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
...+.+|.+|.+.|+++.|+....+..|+.++.....++.++.
T Consensus 427 tfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~ 469 (538)
T KOG0252|consen 427 TFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHN 469 (538)
T ss_pred eEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhcc
Confidence 7788899999999999999999999999999999999988853
No 90
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.96 E-value=2.9e-26 Score=226.55 Aligned_cols=383 Identities=11% Similarity=0.060 Sum_probs=247.3
Q ss_pred HHHHHHHHHHHHHhhhhchhhHHHHHh-h--cCCCCCCchHHHHHHHHHHhhhcchhhhhhhh-cCCchhHHHHHHHHHH
Q 010744 43 LILINLAAIMERADENLLPSVYKEVSE-A--FNAGPSDLGYLTFIRNFVQGLSSPLAGVLVIN-YDRPAVLTIGILCWAF 118 (502)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~i~~-~--~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~ 118 (502)
+..+++..+++.+..+...+.+|.+.+ + +|++..+.+++.+.+.++..++++++|+++|| +|||+++.++.++.++
T Consensus 12 ~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~ 91 (475)
T TIGR00924 12 LFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLML 91 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHH
Confidence 445556667777776666777776654 4 89999999999999999999999999999999 8999999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCC---cchhhhHHHHHHhhhhhHHHHHHHHHhhhcccC
Q 010744 119 STAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGV---RGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWG 195 (502)
Q Consensus 119 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~ 195 (502)
+.++.+++++++.++++|++.|++.|...+...++++|++|+++ |+++.+++..+.++|.++||.+++++.+.
T Consensus 92 g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~---- 167 (475)
T TIGR00924 92 GHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAEN---- 167 (475)
T ss_pred HHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHh----
Confidence 99999999999999999999999999999999999999998764 88999999999999999999999999887
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCC-CCCCCchhhHh---------------hhcCCCcchhH----
Q 010744 196 VPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHG-TGENFDRDELV---------------EKGNTSVSSVW---- 255 (502)
Q Consensus 196 ~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---------------~~~~~~~~~~~---- 255 (502)
.+||+.|.+.++..++..+..++..+..+...+++++ ++++.+..+.. ...........
T Consensus 168 -~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (475)
T TIGR00924 168 -YGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTV 246 (475)
T ss_pred -cChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 7999999998765544433333322221111000000 00000000000 00000000000
Q ss_pred ---------HHhHH-HHhhh--cchhHHHHHHHHHHhhhhhhhhH-HHHHHHHHH-hCCChh----hHHHHHHHHHhhhc
Q 010744 256 ---------LESWM-ATKAV--IKVPTFQIIVLQGIVGSLPWTAM-VFFTMWFEL-IGFDHS----STAALLSLFAIGCA 317 (502)
Q Consensus 256 ---------~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~g~s~~----~~~~~~~~~~~~~~ 317 (502)
+...+ ...+. .|...+..+.+.....+..+... +.++.+.++ .+.+.. ..+++.+...+..+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~ii 326 (475)
T TIGR00924 247 TLAVIIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVV 326 (475)
T ss_pred HHHHHHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHH
Confidence 00000 00001 11122333333333444444444 446766654 333321 26677777777777
Q ss_pred ccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhh----hccCCcchhHHHHHHHHHHHHHHhhhccCCCccc
Q 010744 318 VGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLT----AIPQSVSNYYTYAVTLVLMGLTISWNATAANGPM 393 (502)
Q Consensus 318 ~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 393 (502)
+..++..++..|.+||........-...+.++.........+ .......+.+......++.+++.....| ...++
T Consensus 327 l~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p-~~~~~ 405 (475)
T TIGR00924 327 VGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISP-LGLSW 405 (475)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhH-HHHHH
Confidence 777665555555555421100011112222222111111111 0111123455567888899999999888 78999
Q ss_pred hhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHH
Q 010744 394 FAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEK 431 (502)
Q Consensus 394 ~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~ 431 (502)
+.+..|++.||+.+|+......+|..+++.+.....+.
T Consensus 406 ~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~ 443 (475)
T TIGR00924 406 WTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVP 443 (475)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999988888888888877766554
No 91
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.96 E-value=2.6e-26 Score=224.52 Aligned_cols=370 Identities=15% Similarity=0.177 Sum_probs=252.1
Q ss_pred HHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHh
Q 010744 46 INLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGA 125 (502)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 125 (502)
+++.....++.....+.+++.+..|+| +.....|+.+.+.++.+++.++.|+++|.||||++++.+.++..+|.++++.
T Consensus 49 ~~~~~~~~~~~~~~~a~~l~~I~~diG-~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~at 127 (599)
T PF06609_consen 49 FSLAVIAAYFVLVLPASILPYINADIG-GSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCAT 127 (599)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHhcC-CCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhc
Confidence 344444445555666788899999999 4688999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHH
Q 010744 126 SQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFIL 205 (502)
Q Consensus 126 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~ 205 (502)
++|...++++..+.|+|.|.... ....++|..|.|.|+...++.....-+....++.++..+... .+|||.|++
T Consensus 128 A~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~-----~~WRw~~~~ 201 (599)
T PF06609_consen 128 AQNMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAH-----SGWRWIFYI 201 (599)
T ss_pred CCcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccC-----CCcchHHHH
Confidence 99999999999999999776654 566689999999999888888777666666788888777655 799999999
Q ss_pred HHHHHHHHHHHHHHhccCCccccCCCCCCC-----CCCchhhHh----------------hh--cCCCcchh--------
Q 010744 206 MATLSVLIAFLVLVFVVDPRKKASTFHGTG-----ENFDRDELV----------------EK--GNTSVSSV-------- 254 (502)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~----------------~~--~~~~~~~~-------- 254 (502)
.++...+..++.+++...|++...+.++.. ++.|.-... .. ..+++...
T Consensus 202 ~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~ 281 (599)
T PF06609_consen 202 FIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGF 281 (599)
T ss_pred HHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHH
Confidence 998877776665555443433222111110 111111000 00 01111110
Q ss_pred -------HHHhH-H-----HHhhhcch-hHHHHHHHHHHhhhhh-hhhHHHHHHHHHH-hCCChh---hHHHHHHHHHhh
Q 010744 255 -------WLESW-M-----ATKAVIKV-PTFQIIVLQGIVGSLP-WTAMVFFTMWFEL-IGFDHS---STAALLSLFAIG 315 (502)
Q Consensus 255 -------~~~~~-~-----~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~g~s~~---~~~~~~~~~~~~ 315 (502)
..|.. . -..+++|+ |.+...++..+..... +....+.|..... ++-++. ..++.....+++
T Consensus 282 ~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg 361 (599)
T PF06609_consen 282 VLLVAFVVWEWFGAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFG 361 (599)
T ss_pred HHHHHHHHhhhhccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHH
Confidence 01111 0 01256776 4555554444444333 3334667777665 655543 567777788888
Q ss_pred hcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchh
Q 010744 316 CAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFA 395 (502)
Q Consensus 316 ~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 395 (502)
..++.++.|.+..+++|-|. .++.+.++...+...+....+...+ . .....++.|++.++... ......+
T Consensus 362 ~~~g~~i~g~l~~~ir~~Kw------~li~~~~~~ta~~Gama~~~~~n~~-~--~i~~~~l~g~giG~~~~-~~~~~~q 431 (599)
T PF06609_consen 362 SCAGAVILGLLFSKIRHIKW------QLIFGSVLMTAFCGAMAAVRPDNKN-A--AIAFLVLAGFGIGGILV-PAIVIAQ 431 (599)
T ss_pred HHHHHHHHHHHHHHccchhH------HHHHHHHHHHHHHHHHHHccCCCcc-h--HHHHHHHHHHhHHHHHH-HHHHeeE
Confidence 88888999999998876552 2223333333222222222222222 2 23556667777777666 4566667
Q ss_pred cccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 396 EVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 396 ~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
-..|++..|++.|+..+++.+|+++|..+...+..+.
T Consensus 432 l~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~n~ 468 (599)
T PF06609_consen 432 LIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFTNK 468 (599)
T ss_pred eeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhh
Confidence 7789999999999999999999999999887766543
No 92
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.96 E-value=8.3e-28 Score=214.49 Aligned_cols=346 Identities=15% Similarity=0.111 Sum_probs=223.9
Q ss_pred CCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHH
Q 010744 74 GPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSF 153 (502)
Q Consensus 74 s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 153 (502)
+..-.|.+.+.|++.+.+.++.+|.++||+|||+++.++++..++...+.+.++|+..++++|++.|+.-| ......++
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kg-nl~v~rAi 144 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKG-NLSVIRAI 144 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-chHHHHHH
Confidence 34457899999999999999999999999999999999999999999999999999777888999999865 45666799
Q ss_pred HhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcc-cCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCC
Q 010744 154 IADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQF-WGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFH 232 (502)
Q Consensus 154 i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~-~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (502)
++|.+++|+|+++++.+...+++|.++||.+|+++..... .+.+..-.+-++..++...-.....++.||+-+.+++.
T Consensus 145 isdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~- 223 (451)
T KOG2615|consen 145 ISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKRN- 223 (451)
T ss_pred HHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccccchhhc-
Confidence 9999999999999999999999999999999999987210 11111222222222333331222233445543333222
Q ss_pred CCCCCCchhhHhhhcCCCcchhHHHhHHHHh---hhcchhHHHHHHHHHHhhhhhhhhHHHHHHHH--HHhCCChhhHHH
Q 010744 233 GTGENFDRDELVEKGNTSVSSVWLESWMATK---AVIKVPTFQIIVLQGIVGSLPWTAMVFFTMWF--ELIGFDHSSTAA 307 (502)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~s~~~~~~ 307 (502)
+++ .+..+....+.+..+..+.+.....+ ..-....+....+..+.+...+....+.+..+ +.+|+++.+.|.
T Consensus 224 -~~~-~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~ 301 (451)
T KOG2615|consen 224 -DEH-STLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGK 301 (451)
T ss_pred -ccc-cchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhhee
Confidence 111 11111111111111111111111111 01001222233333444444455554455555 339999999999
Q ss_pred HHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhcc
Q 010744 308 LLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNAT 387 (502)
Q Consensus 308 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 387 (502)
+++..++.+.+.+....+..+|.+... .......+.++.+...+ ...... ...+.+...+..+..+...+
T Consensus 302 vl~~tGl~m~~~ql~~~~~l~~~~~~~-----~a~l~~~l~~~vP~~ll----ls~~~~-~~~l~~~s~l~sf~~A~~vt 371 (451)
T KOG2615|consen 302 VLSTTGLLMLVIQLALVPILPRYKGNI-----KAVLLFSLLLIVPAFLL----LSLART-PVVLYLGSTLKSFSTASVVT 371 (451)
T ss_pred eeehhhHHHHHHHHhccccccccccch-----hhHHHHHHHHHHHHHHH----Hhcccc-chhhhHHHHHHHHHHHHhhH
Confidence 988888888777776666666655221 11222222232222221 111222 24455666677777666666
Q ss_pred CCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcC
Q 010744 388 AANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFG 434 (502)
Q Consensus 388 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~ 434 (502)
....++....|+++||+++|+..+.+.++.++||.+.|.+..+..+
T Consensus 372 -~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~ 417 (451)
T KOG2615|consen 372 -CLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQG 417 (451)
T ss_pred -HHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecC
Confidence 6788889999999999999999999999999999999999887543
No 93
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.96 E-value=1.1e-25 Score=218.79 Aligned_cols=352 Identities=13% Similarity=0.062 Sum_probs=243.1
Q ss_pred HHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHH--HHHHHHHhhhcchhhh-hhhhcCCchhHHHHHHHH-HH
Q 010744 43 LILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLT--FIRNFVQGLSSPLAGV-LVINYDRPAVLTIGILCW-AF 118 (502)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~--s~~~~~~~~~~~~~G~-l~dr~Grr~~l~~~~~~~-~~ 118 (502)
+..+...++..+.......+.+|.+.+|.|.+.+++|++. ++..+...+.+++++. ..||+||||.+++...+. +.
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~ 82 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence 4566677888888888999999999999999999999974 6678888888888854 799999999875555332 22
Q ss_pred HHHHHH---hhhH-HHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhccc
Q 010744 119 STAAVG---ASQH-FLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFW 194 (502)
Q Consensus 119 ~~~~~~---~~~~-~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~ 194 (502)
.....+ ..++ ..+++..-++.++..+...+...++..|..++++++...+....+..+|.++|+...+++.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~--- 159 (390)
T TIGR02718 83 CLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGK--- 159 (390)
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 222222 2222 334455556667777888888888999999888889999999999999999999999999887
Q ss_pred CcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHH
Q 010744 195 GVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQII 274 (502)
Q Consensus 195 ~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (502)
.|||.+|++.+++.++..+..++.+|+++++.++. ++..++.++.+|+|.++..
T Consensus 160 --~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~l~~~~~~~~ 213 (390)
T TIGR02718 160 --FGQRPAFLLVACVPLASLVCVLWLKDRAVASPEAP------------------------LARRASLFRFFRRPLAWSL 213 (390)
T ss_pred --hCHHHHHHHHHHHHHHHHHHHHHcCCCCcCccccc------------------------hhhHHHHHHHHcCcCHHHH
Confidence 89999999999888877776666655432111000 0011234567777777666
Q ss_pred HHHHHhhhhhh-hhHHHHHHHHHHhCCChhhHHHHHHHHHh-hhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhh
Q 010744 275 VLQGIVGSLPW-TAMVFFTMWFELIGFDHSSTAALLSLFAI-GCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIP 352 (502)
Q Consensus 275 ~~~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 352 (502)
....++..... ....+.+.|+++.|+++++.+.+...... ..+++.++.|++.||+++|+.. . .+..+...
T Consensus 214 ~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l-----~--~~~~~~~~ 286 (390)
T TIGR02718 214 LALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTF-----I--LGVGLAGS 286 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHH-----H--HHHHHHHH
Confidence 65555554433 33478888999999999999999887764 5667789999999999998732 1 11111101
Q ss_pred HHHHHhh-hc-cCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCC-CchhhHHHHHHHhhhhhhhhhHHHHHHHH
Q 010744 353 FSWFLLT-AI-PQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPA-KHRTMIYAFDRAFEGSFSSFAAPLVGILS 429 (502)
Q Consensus 353 ~~~~~~~-~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~-~~~~~~~g~~~~~~~~~~~~~~~~~g~l~ 429 (502)
....... .. ..... .........+.++..+...+ ...+...+..++ +.+++.+++.+...+++..++|.+.|.+.
T Consensus 287 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~ 364 (390)
T TIGR02718 287 LALLWFAQAAFWLAPG-IAVAWSCSAFGSLITGITSV-AIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLT 364 (390)
T ss_pred HHHHHHHHHHcccCCc-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111 10 11111 12222223333444444444 345555555555 88999999999999999999999999999
Q ss_pred HHh
Q 010744 430 EKM 432 (502)
Q Consensus 430 ~~~ 432 (502)
|..
T Consensus 365 ~~~ 367 (390)
T TIGR02718 365 DRF 367 (390)
T ss_pred HHH
Confidence 985
No 94
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.95 E-value=1.1e-26 Score=217.86 Aligned_cols=348 Identities=12% Similarity=0.076 Sum_probs=235.8
Q ss_pred hhhchhhHHHHHhhcCCCCCC-chHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 010744 57 ENLLPSVYKEVSEAFNAGPSD-LGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMW 135 (502)
Q Consensus 57 ~~~~~~~~~~i~~~~~~s~~~-~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 135 (502)
+...+.+.|.+.+|+|+|.+| .|.+.++++.+++++.++.|+++||+|.|+++.++.+.+++.+++.++++++..+.+.
T Consensus 42 R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~ 121 (511)
T TIGR00806 42 RPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLM 121 (511)
T ss_pred hchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567888999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHH--HHHHHH
Q 010744 136 RAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMA--TLSVLI 213 (502)
Q Consensus 136 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~--~~~~~~ 213 (502)
|++.|++.|... +...++..|+|+++|+++.++..++..+|.++++++++++. . .|||+-+.+.- ..+..+
T Consensus 122 R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s-----~gWr~y~~Ln~Isl~s~~~ 194 (511)
T TIGR00806 122 EVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-T-----LGWISYSTLNIISLVFMTF 194 (511)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-----cCchhHHHHHHHHHHHHHH
Confidence 999999999999 99999999999999999999999999999999999999944 4 68997665532 222333
Q ss_pred HHHHHHhccCCccccC-CCCC--C-------CCCCchhhHhhh--cCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhh
Q 010744 214 AFLVLVFVVDPRKKAS-TFHG--T-------GENFDRDELVEK--GNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVG 281 (502)
Q Consensus 214 ~~~~~~~~~~~~~~~~-~~~~--~-------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (502)
+++.-+++|.+++..- ++++ + +...+....... .+.......+..+..++...+++.++...+...+.
T Consensus 195 a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a 274 (511)
T TIGR00806 195 SVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFN 274 (511)
T ss_pred HHHHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHH
Confidence 3333344444333110 1000 0 000000000000 00011123345666777788888888777777666
Q ss_pred hhhhhhH-HHHHHHHHHh-CCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhh
Q 010744 282 SLPWTAM-VFFTMWFELI-GFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLT 359 (502)
Q Consensus 282 ~~~~~~~-~~~~~~~~~~-g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (502)
...+... +|.-..-++. +-.+.-.|..-++..+.+.+..+..|++-.+..+.. .+.+..++.+ -..+ ++
T Consensus 275 ~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~----~l~l~v~s~~----~~gl-l~ 345 (511)
T TIGR00806 275 SAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWS----KLLIAVVSAI----QAGL-VF 345 (511)
T ss_pred hhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhH----HHHHHHHHHH----HHHH-hh
Confidence 6555554 5543333332 211124566666677777778888888755442211 1122211111 1112 22
Q ss_pred hccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhH
Q 010744 360 AIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAA 422 (502)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~ 422 (502)
..... ++.++.++..++++.......+ +...-+++....+.-|...|+.+++.-+...+-.
T Consensus 346 ~m~~t-~~Iw~~Y~~yvlf~~~y~flit-ia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT 406 (511)
T TIGR00806 346 WMSQS-HDIWVLYVTYVLFRGIYQFLVP-IATFQIASSLSKELCALVFGINTFVATALKTIIT 406 (511)
T ss_pred hhhcc-cchHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcccceEEEEecHHHHHHHHHHheE
Confidence 22223 3456677888888877777766 5666666666667778888888776655554433
No 95
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.95 E-value=5.4e-32 Score=268.46 Aligned_cols=375 Identities=18% Similarity=0.104 Sum_probs=254.4
Q ss_pred HHHHHHHHHhhhhchhhHHHHH--hhcCCCC---------CCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHH
Q 010744 47 NLAAIMERADENLLPSVYKEVS--EAFNAGP---------SDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILC 115 (502)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~i~--~~~~~s~---------~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 115 (502)
.++.+..++|....+...+... .+++.+. .+.+++.+...+|..+|+++.|+++||+|||+.+.++.++
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~ 85 (451)
T PF00083_consen 6 SLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALL 85 (451)
T ss_pred HHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 4555778888877777666555 2222222 2367899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh---HHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhc
Q 010744 116 WAFSTAAVGASQ---HFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQ 192 (502)
Q Consensus 116 ~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~ 192 (502)
..++.++.++++ |++.+.++|+++|++.|...+....++.|..|+++|++..++.+.+..+|..++..++..+...
T Consensus 86 ~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~- 164 (451)
T PF00083_consen 86 MIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYY- 164 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence 999999999999 9999999999999999999999999999999999999999999999999999998887666433
Q ss_pred ccCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcC-----CCcchhHHHh---HHHHhh
Q 010744 193 FWGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGN-----TSVSSVWLES---WMATKA 264 (502)
Q Consensus 193 ~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~---~~~~~~ 264 (502)
.+..+||+.+.+.++++++..+..+++||+|++...+++.+|++...++....+. .+.....++. ....++
T Consensus 165 -~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (451)
T PF00083_consen 165 -SDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRD 243 (451)
T ss_pred -cccccccccccccccccccccccccccccccceecccccccccccccccccccccccccccccccccccccccceeeee
Confidence 0124599999999999988888888899999998877766655544433211100 0000000000 022344
Q ss_pred hcchhH----HHH-HHHHHHhhhhhhhhH-HHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcc
Q 010744 265 VIKVPT----FQI-IVLQGIVGSLPWTAM-VFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSG 338 (502)
Q Consensus 265 ~~~~~~----~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~ 338 (502)
+++++. ... ..+..+.....+... .|.|.++++.|.+.. -.......+...++.+++.++.||+|||+...
T Consensus 244 l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i- 320 (451)
T PF00083_consen 244 LFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLI- 320 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccccc-
Confidence 555432 111 112211212222233 556777777777765 22333455667778888889999999997532
Q ss_pred hhHHhhhhhhhhhhHHHHH---hhhccCCc--chhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHh
Q 010744 339 RVMCAQFSAFMGIPFSWFL---LTAIPQSV--SNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAF 413 (502)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~ 413 (502)
.+...+..+.... .......+ .....+ ....+.....+....+..+.+..|.+|++.|+++.|+...+
T Consensus 321 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~ 393 (451)
T PF00083_consen 321 ------IGLLLMAICSLILGIIFFLGVSSSSWWSILSI-VFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAV 393 (451)
T ss_pred ------cccccccccccccccccccccccccccccccc-eeeeecccccccccccccccccccccccccccccccccccc
Confidence 1111111111111 11111111 011111 12222222222222225678889999999999999999999
Q ss_pred hhhhhhhhHHHHHHHHHHhc
Q 010744 414 EGSFSSFAAPLVGILSEKMF 433 (502)
Q Consensus 414 ~~~~~~~~~~~~g~l~~~~~ 433 (502)
+++++.+++.+...+.+..+
T Consensus 394 ~~i~~~i~~~~~~~~~~~~~ 413 (451)
T PF00083_consen 394 GRIGGFIIPFLFPYLFNNLG 413 (451)
T ss_pred cccccccccccccccccccc
Confidence 99999999999888887754
No 96
>PTZ00207 hypothetical protein; Provisional
Probab=99.94 E-value=8e-25 Score=215.76 Aligned_cols=381 Identities=11% Similarity=0.080 Sum_probs=262.0
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHH
Q 010744 36 VLGISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILC 115 (502)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 115 (502)
..+||..+........+.+.. +.++...|.+++++|+|..+++++.++. .....++++.|++.||+|+|+++.++.++
T Consensus 23 e~~Rw~~lva~~~~~~~~g~~-y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll 100 (591)
T PTZ00207 23 EPRRFALLVLGAFCSICTSFM-YAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTV 100 (591)
T ss_pred ccchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 366777666665555554433 4667788999999999999999998874 44556788899999999999999999999
Q ss_pred HHHHHHHHHhh------hHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHh
Q 010744 116 WAFSTAAVGAS------QHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMA 189 (502)
Q Consensus 116 ~~~~~~~~~~~------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~ 189 (502)
++++.++++++ ++++.+++.|++.|+|.+...+.+...+.+|+| ++||++.|+...+.++|.++.+.+...+.
T Consensus 101 ~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~ 179 (591)
T PTZ00207 101 FCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFF 179 (591)
T ss_pred HHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999997 689999999999999999999999999999995 88999999999999999986555544444
Q ss_pred hhcccCcccchHHHHHHHHHHHHHHHHHHHhccCCccccC---CCCCCCCCCchhh------------------------
Q 010744 190 GHQFWGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKAS---TFHGTGENFDRDE------------------------ 242 (502)
Q Consensus 190 ~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~------------------------ 242 (502)
. .+|++.|++.+++.+++.++.+.+.++|+.... +++.++++...++
T Consensus 180 ~------~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~ 253 (591)
T PTZ00207 180 S------DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILI 253 (591)
T ss_pred H------HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHH
Confidence 3 378999999999999988888877766643221 1000000000000
Q ss_pred ---------------------------H-hh------h--------------c-C----------------CCcc----h
Q 010744 243 ---------------------------L-VE------K--------------G-N----------------TSVS----S 253 (502)
Q Consensus 243 ---------------------------~-~~------~--------------~-~----------------~~~~----~ 253 (502)
. .. . + + .++. .
T Consensus 254 ~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (591)
T PTZ00207 254 ILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVET 333 (591)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccc
Confidence 0 00 0 0 0 0000 0
Q ss_pred hHH----HhHHHHhhhcchhHHHHHHHHHHhhhhhh-hhHHHHHHHHHHh-CCChhh--HHHHHHHHHhhhcccccchhh
Q 010744 254 VWL----ESWMATKAVIKVPTFQIIVLQGIVGSLPW-TAMVFFTMWFELI-GFDHSS--TAALLSLFAIGCAVGSFLGGV 325 (502)
Q Consensus 254 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-g~s~~~--~~~~~~~~~~~~~~~~~~~g~ 325 (502)
..+ +....+.+.+++..+|.+....++....- ...+.+.++.+.+ |.+... ...+.++.++++.+|++..|.
T Consensus 334 ~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~ 413 (591)
T PTZ00207 334 DVDYIAPQFQETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSY 413 (591)
T ss_pred cccCCCCCCcchHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHH
Confidence 000 00114556677788888888887766643 3336677777877 773333 233778899999999999999
Q ss_pred hhhhhccccCC--cchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCch
Q 010744 326 VADRISQAYPH--SGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHR 403 (502)
Q Consensus 326 l~d~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~ 403 (502)
+.....+|+.. .-+...+.+..+ ......+.+...+. ..+.+..++.|++.|...+ +....+.|++. ++-
T Consensus 414 ~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~-----~~L~~~~~lvg~~~G~~~~-~~~~i~selFg-k~~ 485 (591)
T PTZ00207 414 FEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPK-----AALPLPYFIAAFANGFMAA-TIALVTRTIFA-KDP 485 (591)
T ss_pred HHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCc-----cHhHHHHHHHHHHhhHhHH-HHHHHHHHHhc-cch
Confidence 88333333210 112223222222 22222222222221 2366778888888888888 78899999999 899
Q ss_pred hhHHHHHHHhhhhhhhhh-HHHHHHHHHHhc
Q 010744 404 TMIYAFDRAFEGSFSSFA-APLVGILSEKMF 433 (502)
Q Consensus 404 ~~~~g~~~~~~~~~~~~~-~~~~g~l~~~~~ 433 (502)
|+-+-+.....-+|..+. -.+.|.++|+-.
T Consensus 486 g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea 516 (591)
T PTZ00207 486 AKHYNFCFLGSVLSAIFLNRLLYGEWYTQQA 516 (591)
T ss_pred HHHhhHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998888877777777754 568888998853
No 97
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.94 E-value=1.1e-25 Score=226.96 Aligned_cols=342 Identities=14% Similarity=0.079 Sum_probs=235.4
Q ss_pred HhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhh
Q 010744 68 SEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNGFGLAIVI 147 (502)
Q Consensus 68 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 147 (502)
.+.++.+.....+..+++.+|..+|++++|+++||+|||++++.++++..++.++.++++|++.+++.|+++|++.++..
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~ 189 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPL 189 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchh
Confidence 45667788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHHHhccCCccc
Q 010744 148 PALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKK 227 (502)
Q Consensus 148 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~ 227 (502)
.....++.|++++++|+.+..+ ......+..+++..++++. .+||+.+++..++.++..++.++.+|+|++.
T Consensus 190 ~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~-------~~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl 261 (521)
T KOG0255|consen 190 TVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYIT-------RDWRWLFWIISIPSGLFLLLWFLPPESPRWL 261 (521)
T ss_pred HHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHH-------hhHHHHHHHHHHHHHHHHHHHHccCcChHHH
Confidence 9999999999999999999999 7777778888888888886 4899999999999988877755555778888
Q ss_pred cCCCCCCCCCCchhhHhhhc--CCCcchhHHHh-------------HHHHhhhcchhHHHHHHHHHHhhhhhhhhHHH-H
Q 010744 228 ASTFHGTGENFDRDELVEKG--NTSVSSVWLES-------------WMATKAVIKVPTFQIIVLQGIVGSLPWTAMVF-F 291 (502)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 291 (502)
..+++.++.....++..+.+ ........... .....++++.|.+....+...+.+..+....+ +
T Consensus 262 ~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl 341 (521)
T KOG0255|consen 262 LSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGL 341 (521)
T ss_pred HHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhh
Confidence 77765544433333322211 01110000000 01133566666555555544444433333333 3
Q ss_pred HHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHH
Q 010744 292 TMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTY 371 (502)
Q Consensus 292 ~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (502)
+.....+|.+... .....+.....+....+...|++|||... ..+..+..... +........... ...
T Consensus 342 ~~~~~~lg~~~~~---~~~~~~~~~~p~~~~~~~~~~~~gR~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~-~~~ 409 (521)
T KOG0255|consen 342 SLNVSGLGGNIYL---NFTLSGLVELPAYFRNGLLLPEFGRRPPL-------FLSLFLAGIGL-LLFGWLPDDLGG-WLH 409 (521)
T ss_pred hhhhhhcCchHHH---HHHHHHHHHhhHHHHHHHHHHHhCcHHHH-------HHHHHHHHHHH-HHHHHhhccchh-HHH
Confidence 3333445555433 33334446677777778999999888632 22222211111 222222222221 111
Q ss_pred HHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHH
Q 010744 372 AVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSE 430 (502)
Q Consensus 372 ~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~ 430 (502)
.....+..++.+.... +.+.+..|.+|+..|+.+.+..+....+++.++|.+.-....
T Consensus 410 ~~~~~~~~~~~~~~~~-~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 410 WILPLLGKFFIGSAFN-LIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1222222233333333 458899999999999999999999999999999988755544
No 98
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.93 E-value=6.7e-23 Score=203.77 Aligned_cols=374 Identities=13% Similarity=0.045 Sum_probs=220.8
Q ss_pred HHHHHHHHHHHHhhhhchhh-HHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhh-cCCchhHHHHHHHHHHHHH
Q 010744 44 ILINLAAIMERADENLLPSV-YKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVIN-YDRPAVLTIGILCWAFSTA 121 (502)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~ 121 (502)
..+++..+...+..+..... ...+.+++|++.++.+++.+.+........+++|+++|| +|||+++..+.++.+++..
T Consensus 24 ~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~ 103 (500)
T PRK09584 24 YLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYA 103 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 34445555555555444444 445568999999999999888877666667899999999 5999999999999999999
Q ss_pred HHHhhh-HHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCC--cchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCccc
Q 010744 122 AVGASQ-HFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGV--RGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPG 198 (502)
Q Consensus 122 ~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~ 198 (502)
++++++ +.+.++++|+++|++.|...+...+++.|++|+++ |..+++++..+.++|..+||.+++++.+. .|
T Consensus 104 l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~-----~g 178 (500)
T PRK09584 104 LVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAK-----YG 178 (500)
T ss_pred HHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHh-----hC
Confidence 998874 56677788999999999999999999999997654 45688999999999999999999999987 89
Q ss_pred chHHHHHHHHHHHHHHHHHHH---hccCCccccCCCCCCCCCCchhh---------Hh-hhcCCCcchhH---------H
Q 010744 199 WRCAFILMATLSVLIAFLVLV---FVVDPRKKASTFHGTGENFDRDE---------LV-EKGNTSVSSVW---------L 256 (502)
Q Consensus 199 wr~~f~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---------~~-~~~~~~~~~~~---------~ 256 (502)
||+.|++.++..++..+..++ .+++.......++.+........ .. .....+..... .
T Consensus 179 ~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (500)
T PRK09584 179 WSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVV 258 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 999999987644443332222 22221111000000000000000 00 00000000000 0
Q ss_pred HhHH---HHhhhcchhHHHHHHHHHHhhhhhhhhHHHHHHHHHH---hCCCh------hhHHHHHHHHHhhhcccccchh
Q 010744 257 ESWM---ATKAVIKVPTFQIIVLQGIVGSLPWTAMVFFTMWFEL---IGFDH------SSTAALLSLFAIGCAVGSFLGG 324 (502)
Q Consensus 257 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~s~------~~~~~~~~~~~~~~~~~~~~~g 324 (502)
.... ..++.-++|.+ ..+.........+......|.++.. ...+. ...+.+.+...+..++..++.+
T Consensus 259 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~ 337 (500)
T PRK09584 259 IFGKEAFAMKGAARRKMI-VAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILA 337 (500)
T ss_pred HHHHHHhhcCHHHHHHHH-HHHHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHH
Confidence 0000 00111122222 2222222222222233333443321 11111 2255666666766666666666
Q ss_pred hhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhcc----CCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCC
Q 010744 325 VVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIP----QSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPA 400 (502)
Q Consensus 325 ~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~ 400 (502)
++-+|.++|.... ....++.++............. ...-+.+......++.|++.....| ....++.+..|+
T Consensus 338 ~~~~~l~~r~~~~---~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p-~g~s~~~~~aP~ 413 (500)
T PRK09584 338 AIYNKMGDRLPMP---HKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISG-LGLAMVAQLVPQ 413 (500)
T ss_pred HHHHHhCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhH-HHHHHHHHhCcH
Confidence 6666666553221 1222222222211111111111 0111233466788888999998888 788999999999
Q ss_pred CchhhHHHHHHHhhhhhhhhhHHHHHHHHHH
Q 010744 401 KHRTMIYAFDRAFEGSFSSFAAPLVGILSEK 431 (502)
Q Consensus 401 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~ 431 (502)
+.||+.+|+... +.++++.+.|.+.+.
T Consensus 414 ~~rg~~~g~~~l----~~a~g~~~~g~~~~~ 440 (500)
T PRK09584 414 RLMGFIMGSWFL----TTAGAALIAGYVANL 440 (500)
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHH
Confidence 999999996644 445566666666654
No 99
>PRK09669 putative symporter YagG; Provisional
Probab=99.93 E-value=3.6e-23 Score=204.31 Aligned_cols=341 Identities=12% Similarity=0.107 Sum_probs=232.8
Q ss_pred hhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhh----cCCc-hhHHHHHHHHHHHHHHHHhhh------HH
Q 010744 61 PSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVIN----YDRP-AVLTIGILCWAFSTAAVGASQ------HF 129 (502)
Q Consensus 61 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~~~------~~ 129 (502)
..+.+.+.+++|+++.++|.+.++..+..++..|+.|+++|| +||| +.++.+.+..+++.++....+ ..
T Consensus 30 ~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~ 109 (444)
T PRK09669 30 LFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKI 109 (444)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHH
Confidence 445677888999999999999999999999999999999998 7775 466677777777776554443 24
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHhhcc-CCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcc--cCcccchHHHHHH
Q 010744 130 LHVGMWRAVNGFGLAIVIPALQSFIADSY-KDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQF--WGVPGWRCAFILM 206 (502)
Q Consensus 130 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~--~~~~~wr~~f~~~ 206 (502)
+.+++..++.+.+.........++.+|+. ++++|++..++......+|..+++.+...+....+ ....+|+..+.+.
T Consensus 110 ~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~ 189 (444)
T PRK09669 110 IYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVM 189 (444)
T ss_pred HHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHH
Confidence 56666777778777777777889999998 55889999999999889988888776655544321 1235899999998
Q ss_pred HHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhhh
Q 010744 207 ATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLPWT 286 (502)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (502)
++++++..++.++..+|++...+++ + .+..+..+.++|+|.++..+...++......
T Consensus 190 ~ii~~v~~~~~~~~~~e~~~~~~~~--------------------~---~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~ 246 (444)
T PRK09669 190 GLLGVVLFFCCFFMTKERYTPEVDN--------------------S---SSVWKDLKLLLGNSQWRIMFIFNVVLLTAVV 246 (444)
T ss_pred HHHHHHHHHHHhCCeEEecCCCCcC--------------------C---CCHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Confidence 8888777776666555432111000 0 1123456668889988887776655544443
Q ss_pred hH-HHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCc
Q 010744 287 AM-VFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSV 365 (502)
Q Consensus 287 ~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (502)
.. ...+.|.+..-.++...+.+.....+..+++.++.+++.||+|+|+.. ..+........ ......+ .
T Consensus 247 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~-------~~~~~~~~~~~-~~~~~~~--~ 316 (444)
T PRK09669 247 TRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAF-------KWTIVAFVILS-ALIFFIP--P 316 (444)
T ss_pred HHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH-------HHHHHHHHHHH-HHHHHhC--c
Confidence 33 233333343222233444455555677788888999999999988742 11111111111 1111222 2
Q ss_pred chhHHHHHHHHHHHHHHhhhccCCCccchhcccC-------CCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcCCC
Q 010744 366 SNYYTYAVTLVLMGLTISWNATAANGPMFAEVVP-------AKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFGYD 436 (502)
Q Consensus 366 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 436 (502)
+..+...+..++.|++.+...+ ...+++.|..+ .+..|...|..+.+..+|.++++.+.|.+.+. .+|+
T Consensus 317 ~~~~~~~~~~~i~g~~~~~~~~-~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~-~Gy~ 392 (444)
T PRK09669 317 SNVWLIFALNILFNFIQNLTTP-LQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAW-VDYV 392 (444)
T ss_pred chHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCC
Confidence 2234445566678888887776 77888888764 34457788999999999999999999999998 5664
No 100
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.93 E-value=4.2e-23 Score=197.49 Aligned_cols=348 Identities=17% Similarity=0.202 Sum_probs=249.3
Q ss_pred HHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcC-CchhHHHHHHHHHHHHHHHHhhh
Q 010744 49 AAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYD-RPAVLTIGILCWAFSTAAVGASQ 127 (502)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G-rr~~l~~~~~~~~~~~~~~~~~~ 127 (502)
.+++.++......|..+.+-++.|.|..|+|.+.++..+...++++++|.++||++ +|+.+.+..++.++........+
T Consensus 10 ~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~ 89 (400)
T PF03825_consen 10 MYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSS 89 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34555555566777888899999999999999999999999999999999999986 56788888888888877888889
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHH-HHHHhhhcccCcccchHHHHHH
Q 010744 128 HFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVL-ATIMAGHQFWGVPGWRCAFILM 206 (502)
Q Consensus 128 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~-~~~l~~~~~~~~~~wr~~f~~~ 206 (502)
+++.+++.-++..+......|...++..+... +++.-.|-.....++|.+++... +..+.... +..+..+.+++.
T Consensus 90 ~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~--~~~~~~~~~~i~ 165 (400)
T PF03825_consen 90 SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYL--GISGTSLIFYIA 165 (400)
T ss_pred cHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhh--ccccccHHHHHH
Confidence 99998888888888888888888888888874 56667778888888888877654 23333320 112333456666
Q ss_pred HHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhhh
Q 010744 207 ATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLPWT 286 (502)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (502)
+...++.....+.+|+.|+++..+.+ ..+...++..+++|+|.+...++..++......
T Consensus 166 ~~~~~ll~~~~l~lp~~~~~~~~~~~---------------------~~~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~ 224 (400)
T PF03825_consen 166 AILSLLLAGFALFLPKTPPKRSAKES---------------------VKKLLGLDALKLLKNPRFLVFLLAAFLIGISHA 224 (400)
T ss_pred HHHHHHHHHHHHhCCCCccccccCCC---------------------cccccchHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 66665555555555554422211110 001111233458899999888887777777666
Q ss_pred hH-HHHHHHHHHhC-CChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCC
Q 010744 287 AM-VFFTMWFELIG-FDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQS 364 (502)
Q Consensus 287 ~~-~~~~~~~~~~g-~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (502)
.. +|.+.|+++.| .+....+.+.++..+++++.-...+++.+|+|.++. +.++.....+=+......
T Consensus 225 ~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~l-----------l~~a~~~~~vR~~l~a~~ 293 (400)
T PF03825_consen 225 AYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWL-----------LLLALVAYAVRWLLYAYF 293 (400)
T ss_pred HHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH-----------HHHHHHHHHHHHHHHHHh
Confidence 66 78999999977 788888888888889999999999999999998873 222222222222222222
Q ss_pred -cchhHH---HHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhh-hhhhhhhHHHHHHHHHHhc
Q 010744 365 -VSNYYT---YAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFE-GSFSSFAAPLVGILSEKMF 433 (502)
Q Consensus 365 -~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~-~~~~~~~~~~~g~l~~~~~ 433 (502)
++.+.. ..+...+-|+..+.... ....++.+..|++.|+++.++++... .+|..+|..++|+++|+.+
T Consensus 294 ~~~~~~~~~~~~l~q~lhG~tf~~~~~-a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g 366 (400)
T PF03825_consen 294 SDPWPFIVALQLLGQLLHGLTFGLFHA-ASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFG 366 (400)
T ss_pred cCCcHHHHHHHHHHHhhhhHHHHHHHH-HHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhc
Confidence 221221 12223457877777666 67889999999999999999998764 6888899999999999964
No 101
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.92 E-value=1.2e-22 Score=201.79 Aligned_cols=346 Identities=12% Similarity=0.099 Sum_probs=231.0
Q ss_pred hHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhh----hcCC-chhHHHHHHHHHHHHHHHHhhh------HHHH
Q 010744 63 VYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVI----NYDR-PAVLTIGILCWAFSTAAVGASQ------HFLH 131 (502)
Q Consensus 63 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d----r~Gr-r~~l~~~~~~~~~~~~~~~~~~------~~~~ 131 (502)
+...+.+.+|+++.++|.+..+..+.-++..|++|+++| |+|| |+.++.+.+..+++.+++-..+ .+..
T Consensus 29 l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~ 108 (473)
T PRK10429 29 LMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVF 108 (473)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHH
Confidence 455667778999999999999999999999999999999 6699 5577778888888766554322 2345
Q ss_pred HHHHHHHHhhhhhhhhhhhHHHHhhcc-CCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcc--cCcccchHHHHHHHH
Q 010744 132 VGMWRAVNGFGLAIVIPALQSFIADSY-KDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQF--WGVPGWRCAFILMAT 208 (502)
Q Consensus 132 l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~--~~~~~wr~~f~~~~~ 208 (502)
+++..++.+++.....+...+++.|.. ++++|.+..+....+..+|..+.+.+...+.+..+ .+..+|+....+.++
T Consensus 109 ~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~ 188 (473)
T PRK10429 109 VCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIA 188 (473)
T ss_pred HHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence 666677788888888899999999999 68999999999788788877666665554433211 112468888888887
Q ss_pred HHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhhhhH
Q 010744 209 LSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLPWTAM 288 (502)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (502)
+.++..++.++..+|.+.......+ ++++.+ ..+..+.++++|.++..+...+.........
T Consensus 189 ~~~~~~~~~~~~~~e~~~~~~~~~~---------------~~~~~~---~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~ 250 (473)
T PRK10429 189 FFIVSTIITLRNVHEVYSSDNQVSA---------------EGSHLT---LKDIVALIYKNDQLSCLLGMALAYNIASNII 250 (473)
T ss_pred HHHHHHHHHHcCceecCCccccccc---------------cccCCC---HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 7777666666655553211110000 000111 2233455678888887777666655544444
Q ss_pred -HHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhh-ccCCcc
Q 010744 289 -VFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTA-IPQSVS 366 (502)
Q Consensus 289 -~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 366 (502)
.+.+.|.+....+....+.+.....++.+++.++.+++.||+|+|+.. ..+..+........+.. ... +.
T Consensus 251 ~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~-------~~~~~~~~~~~~~~~~~~~~~-~~ 322 (473)
T PRK10429 251 NGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILW-------AGASIFPVLSCGVLLLMGLAA-PH 322 (473)
T ss_pred hhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH-------HHHHHHHHHHHHHHHHHhccC-ch
Confidence 445555554333455666677777788899999999999999998742 11121111111111111 111 22
Q ss_pred hhHHHHHHHHHHHHHHhhhccCCCccchhcccC-------CCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcCCC
Q 010744 367 NYYTYAVTLVLMGLTISWNATAANGPMFAEVVP-------AKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFGYD 436 (502)
Q Consensus 367 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 436 (502)
..+...+..++.|++.+.... ...++++|..+ .+..|...|....+..++.++++.+.|.+.+. .+|+
T Consensus 323 ~~~~~~i~~~l~g~~~~~~~~-~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~-~Gy~ 397 (473)
T PRK10429 323 NALLIVIAGILLNIGTALFWV-LQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGL-IGYV 397 (473)
T ss_pred hHHHHHHHHHHHHHHHHHHHH-HHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCC
Confidence 233344555666777666665 56778888754 44567799999999999999999999999998 5564
No 102
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.92 E-value=3.6e-25 Score=189.26 Aligned_cols=366 Identities=15% Similarity=0.107 Sum_probs=256.7
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhh-cCCchhHHHHHHH
Q 010744 37 LGISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVIN-YDRPAVLTIGILC 115 (502)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~ 115 (502)
.+|...+..+|+..|-.++.....+.+..++..|.+++.++..++.+.|.....+...+.|++.|| +|.|..-++-...
T Consensus 40 ~hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~f 119 (459)
T KOG4686|consen 40 GHRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIF 119 (459)
T ss_pred hhHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHH
Confidence 456677788888888888888899999999999999999999999999999999999999999995 8888877776777
Q ss_pred HHHHHHHHHh---hhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhc
Q 010744 116 WAFSTAAVGA---SQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQ 192 (502)
Q Consensus 116 ~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~ 192 (502)
..+|.++++. .+.+|.+.++|++.|+|.-...++-+++..-||..|+.+.++|+..+..-+|..+--.+.+++.+..
T Consensus 120 v~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~ 199 (459)
T KOG4686|consen 120 VFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTM 199 (459)
T ss_pred HHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHH
Confidence 7778877764 7999999999999999988888999999999999999999999999999999988777777776652
Q ss_pred c--cCc-----ccchHHHH-HHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhh
Q 010744 193 F--WGV-----PGWRCAFI-LMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKA 264 (502)
Q Consensus 193 ~--~~~-----~~wr~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (502)
+ .+. .|-...+- ......++++...-+. + .+.++.-.++ + ....+..+..+ ..
T Consensus 200 ~~~~~~~ghT~LG~~l~~~~~tc~~slical~lg~~-D-~rAerilh~e-~-----------g~~Ge~pkLtd-v~---- 260 (459)
T KOG4686|consen 200 GRMFPGVGHTLLGLWLCFEVKTCKQSLICALSLGLS-D-DRAERILHLE-E-----------GFLGEEPKLTD-VN---- 260 (459)
T ss_pred HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhh-h-hHHHHHHhhh-c-----------CcccCCccccc-cc----
Confidence 2 000 11111111 1112222222211111 1 1110000000 0 00000000000 00
Q ss_pred hcchhHHHHHHHHHHhhhhhhhhH-HHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHH
Q 010744 265 VIKVPTFQIIVLQGIVGSLPWTAM-VFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMC 342 (502)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 342 (502)
-+ .|.+|.+.+..++....+..+ ...|.++++ +|+|+..++.+.+.......+..++.|.++||+|++-..
T Consensus 261 ~f-~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~w------ 333 (459)
T KOG4686|consen 261 TF-YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWW------ 333 (459)
T ss_pred cc-CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehh------
Confidence 11 266777777666666655444 677888887 999999999999998888889999999999999998532
Q ss_pred hhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhH
Q 010744 343 AQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAA 422 (502)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~ 422 (502)
...+.+..+..-. .+.+...+ ....+.++|........ ..+..++.++|.++.|++.|..+.+.++|-++.|
T Consensus 334 v~~a~~~tl~~H~--~l~Ft~ls-----Py~~m~~lGLsysllAc-slWP~va~~vpE~qLGTaygf~qsIqNLgla~i~ 405 (459)
T KOG4686|consen 334 VASACILTLLGHS--GLFFTFLS-----PYTSMTFLGLSYSLLAC-SLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIP 405 (459)
T ss_pred HHHHHHHHHHHhh--hHHhhhcc-----HHHHHHHHhhhHHHHHH-HHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHh
Confidence 1111111111111 11111111 22455566776666554 4677888889999999999999999999999999
Q ss_pred HHHHHHHHHhcCCC
Q 010744 423 PLVGILSEKMFGYD 436 (502)
Q Consensus 423 ~~~g~l~~~~~~~~ 436 (502)
.+.|.+.|..++|+
T Consensus 406 Iiag~i~d~~g~y~ 419 (459)
T KOG4686|consen 406 IIAGFIADGDGSYD 419 (459)
T ss_pred hhhheeecCCCchh
Confidence 99999999987763
No 103
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.92 E-value=2.1e-23 Score=205.61 Aligned_cols=373 Identities=11% Similarity=-0.003 Sum_probs=243.1
Q ss_pred HHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcC-----CchhHHHHHHH
Q 010744 41 LSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYD-----RPAVLTIGILC 115 (502)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G-----rr~~l~~~~~~ 115 (502)
..+.++...++..+........+.|.+.+++|++.++++...++..+...+-.+ +|+++||++ ||+.++++.++
T Consensus 26 ~~~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l 104 (468)
T TIGR00788 26 VVLAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLL 104 (468)
T ss_pred hHHHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHH
Confidence 444555556677777744455667778888999999999999999999999666 999999998 77788888777
Q ss_pred HH-HHHHHHHhhhHHHHH-HHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHH---HHHHhhhhhHHHHHHHHHhh
Q 010744 116 WA-FSTAAVGASQHFLHV-GMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLL---SLVGTMGGIGGGVLATIMAG 190 (502)
Q Consensus 116 ~~-~~~~~~~~~~~~~~l-~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~---~~~~~~G~~~g~~~~~~l~~ 190 (502)
.+ +.....+..++.... .+..++.+++.+...++.-++..|..+ +++....+.. .....+|.++|+.+++.+.+
T Consensus 105 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~ 183 (468)
T TIGR00788 105 GSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLD 183 (468)
T ss_pred HHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 63 444444444554444 448899999999999999999999997 5555543343 33445899999999999998
Q ss_pred hcccCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhH
Q 010744 191 HQFWGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPT 270 (502)
Q Consensus 191 ~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (502)
. .+||..|++.+++.++..+...+++|++.....+..++ +..... ..........++..+...+.+++|.
T Consensus 184 ~-----~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~ 253 (468)
T TIGR00788 184 K-----TLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTY--LEMNMA---LLTLGVLANVKVQILGLRGAIQLLE 253 (468)
T ss_pred h-----cCcchHHHHHHHHHHHHHHHHHhccccccccccccccc--chhhhh---hhhhhHHHHHHHHHHHHHHHHhcHH
Confidence 7 89999999998888777444444444321111111000 000000 0000000012232344455567777
Q ss_pred HHHHHHHHHh-hhhhhhhH-HHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhh
Q 010744 271 FQIIVLQGIV-GSLPWTAM-VFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAF 348 (502)
Q Consensus 271 ~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 348 (502)
++..++..++ .....+.. .+.-...+..|+++.+.|......+++.+++..+.+++.+|++.|+.. ..+.+
T Consensus 254 i~~~l~fifl~~~~~~~~~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l-------~~~~~ 326 (468)
T TIGR00788 254 IAKPLIFIFLSYANLPGASGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLF-------GVTTL 326 (468)
T ss_pred HHHHHHHHHHHHhhcCCCCceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHH-------HHHHH
Confidence 7765554444 22211111 110011134899999999999999999999999999998888877631 11111
Q ss_pred hhhhHHHHHhhhc-----cCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHH
Q 010744 349 MGIPFSWFLLTAI-----PQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAP 423 (502)
Q Consensus 349 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~ 423 (502)
+............ ....+..+......++.+++.+.... ....++.+..|++.+|+..++.+.+.++|..+++.
T Consensus 327 l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~-~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~ 405 (468)
T TIGR00788 327 LYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFM-PFLVLLARLCPSGCESSVFALLASILHLGSSVSGF 405 (468)
T ss_pred HHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHc-cHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHH
Confidence 1111111100000 00001122233445566666666666 46889999999999999999999999999999999
Q ss_pred HHHHHHHHhc
Q 010744 424 LVGILSEKMF 433 (502)
Q Consensus 424 ~~g~l~~~~~ 433 (502)
++|.+.+..|
T Consensus 406 ~gg~l~~~~g 415 (468)
T TIGR00788 406 LGVLLMETIG 415 (468)
T ss_pred HHHHHHHHcC
Confidence 9999999865
No 104
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.91 E-value=2.2e-21 Score=187.76 Aligned_cols=373 Identities=11% Similarity=0.031 Sum_probs=242.3
Q ss_pred HHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhh----hcCCchhHHHH-HHHHHHHHH
Q 010744 47 NLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVI----NYDRPAVLTIG-ILCWAFSTA 121 (502)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d----r~Grr~~l~~~-~~~~~~~~~ 121 (502)
+...+-..+......+.++.+.+++|.++.+.+++..+..+...+.+|+.|+++| |+||||.++.+ .+...++.+
T Consensus 10 ~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ 89 (477)
T TIGR01301 10 ASVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVI 89 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHH
Confidence 3333444555566667777788999999999999999999999999999999999 59999987764 666777777
Q ss_pred HHHhhhHHH-----------------HHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCc--chhhhHHHHHHhhhhhHHH
Q 010744 122 AVGASQHFL-----------------HVGMWRAVNGFGLAIVIPALQSFIADSYKDGVR--GAGFGLLSLVGTMGGIGGG 182 (502)
Q Consensus 122 ~~~~~~~~~-----------------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~g~ 182 (502)
+.+++++.+ .++++-.+..++.....+...++++|.+|+++| +.+.++.+...++|.++|+
T Consensus 90 ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~ 169 (477)
T TIGR01301 90 LIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGY 169 (477)
T ss_pred HHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 777776643 233333445557788888899999999998865 5899999999999999999
Q ss_pred HHHHHHh--hhcc------cC--cccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcc
Q 010744 183 VLATIMA--GHQF------WG--VPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVS 252 (502)
Q Consensus 183 ~~~~~l~--~~~~------~~--~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (502)
.+++... +..+ .+ ..+.|+.|++.+++.++..++..+..+|.+....++.++ ++.+ +.++....
T Consensus 170 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~-~~~~-----~~~~~~~~ 243 (477)
T TIGR01301 170 AAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFIN-SEAA-----PPSKHGEE 243 (477)
T ss_pred HHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchh-hhcc-----cccccchh
Confidence 9998752 2100 00 126799999999888888888877766643221111000 0000 00000111
Q ss_pred hhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhhhhH-HHHHHHHH-H-hCCChh------hH----HHHHHHHHhhhccc
Q 010744 253 SVWLESWMATKAVIKVPTFQIIVLQGIVGSLPWTAM-VFFTMWFE-L-IGFDHS------ST----AALLSLFAIGCAVG 319 (502)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~-~g~s~~------~~----~~~~~~~~~~~~~~ 319 (502)
...++..+..+.+ .+.++.+.+..++.+..+..+ .|.+.|+. + ++-++. +. .+......+...+.
T Consensus 244 ~~~~~i~~~~~~m--P~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~ 321 (477)
T TIGR01301 244 AFFGELFGAFKYL--PRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGIT 321 (477)
T ss_pred hhHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2233444444332 256666666666766665555 67777764 3 443321 11 22333445555566
Q ss_pred ccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHh-hhcc---------------CCcchhHHHHHHHHHHHHHHh
Q 010744 320 SFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLL-TAIP---------------QSVSNYYTYAVTLVLMGLTIS 383 (502)
Q Consensus 320 ~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---------------~~~~~~~~~~~~~~~~g~~~~ 383 (502)
+++..++.+|+|+||.. -.++.++......... .... ......+...+.+...|+..+
T Consensus 322 s~~l~~l~~~~g~~k~~------~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A 395 (477)
T TIGR01301 322 SIGMEKLCRGWGAGKRL------WGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLA 395 (477)
T ss_pred HHHHHHHHHHhccchhH------HHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHH
Confidence 77788899999864421 1111111111111111 1110 000112445577777888888
Q ss_pred hhccCCCccchhcccCC--CchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcC
Q 010744 384 WNATAANGPMFAEVVPA--KHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFG 434 (502)
Q Consensus 384 ~~~~~~~~~~~~~~~p~--~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~ 434 (502)
.... +.++++++..++ +..|..+|+.|.+..+.+.+.....|.+.+..++
T Consensus 396 ~~~s-iPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~ 447 (477)
T TIGR01301 396 ITYS-IPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGG 447 (477)
T ss_pred HHHH-HhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 7777 778999998884 5569999999999999999999989997777654
No 105
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.91 E-value=3.6e-22 Score=183.29 Aligned_cols=373 Identities=13% Similarity=0.083 Sum_probs=278.2
Q ss_pred cccchhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHH
Q 010744 34 RKVLGISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGI 113 (502)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 113 (502)
+..++||.++.+.++..+.+.+.+..++++.......|+ +....-|..-+|++.+....+++-|+.||+|-|...+++.
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt 116 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT 116 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence 456789999999999999999999899999888888899 7778889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhh------hHHH--HHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHH
Q 010744 114 LCWAFSTAAVGAS------QHFL--HVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLA 185 (502)
Q Consensus 114 ~~~~~~~~~~~~~------~~~~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~ 185 (502)
...++|..+-..+ +.++ ....+..+.+.++-........+-.-||+++||..+..+-..+..+|.++|.++.
T Consensus 117 ~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llp 196 (480)
T KOG2563|consen 117 VLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLP 196 (480)
T ss_pred HHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhcc
Confidence 9999999987765 3445 6778999999998888888788899999999999999999999999999999999
Q ss_pred HHHhhhcc-cCcccchH--HHHHHHHHHHHHHHHHHHhccC-CccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHH
Q 010744 186 TIMAGHQF-WGVPGWRC--AFILMATLSVLIAFLVLVFVVD-PRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMA 261 (502)
Q Consensus 186 ~~l~~~~~-~~~~~wr~--~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (502)
..+..... .++..|-. .|+..+.++.+..++..+..++ |+......+. ... ..+..+.
T Consensus 197 pilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~------------~~~------~~~f~~s 258 (480)
T KOG2563|consen 197 PILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQA------------ALQ------DASFPKS 258 (480)
T ss_pred ceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHh------------hhh------cCcHHHH
Confidence 98887631 22345654 3554555444444444443333 2222111100 000 0124567
Q ss_pred HhhhcchhHHHHHHHHHHhhhhhhhhH-HHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchh
Q 010744 262 TKAVIKVPTFQIIVLQGIVGSLPWTAM-VFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRV 340 (502)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~ 340 (502)
.++.++++++..+.+......+.+... +.+..-+...|++...+|.......+++++++++.|.+.||.+.-+..
T Consensus 259 i~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~---- 334 (480)
T KOG2563|consen 259 IKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLT---- 334 (480)
T ss_pred HHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHH----
Confidence 788999999988888777665554444 444444555778878999999999999999999999999998775531
Q ss_pred HHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhh
Q 010744 341 MCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSF 420 (502)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~ 420 (502)
.. +......... +.+..........+++.....++|++.....| +-.-+..|..-|..-++..|+.+..+++.+.+
T Consensus 335 -~~-v~~~~~~v~~-~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~P-ig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~ 410 (480)
T KOG2563|consen 335 -TL-VLYLFALVGT-LMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLP-IGFELGVETTYPVAEGTSSGLLNLSGQIFGVI 410 (480)
T ss_pred -HH-HHHHHHHHHH-HHHHHhhccCCceEehhhhHHHHHHhhcCCCC-cceeeeeeeccccCCcccceeEEeehhHHHHH
Confidence 11 1111111111 22222222333344566777788888777777 78888888876788899999999999999999
Q ss_pred hHHHHHHHHHHhc
Q 010744 421 AAPLVGILSEKMF 433 (502)
Q Consensus 421 ~~~~~g~l~~~~~ 433 (502)
-.++.+...+..+
T Consensus 411 ~~~~~~~~~~~~~ 423 (480)
T KOG2563|consen 411 LVFIMGILAEDLG 423 (480)
T ss_pred HHHHHHHHhhccC
Confidence 9999988887765
No 106
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.90 E-value=5e-22 Score=195.19 Aligned_cols=365 Identities=16% Similarity=0.232 Sum_probs=265.8
Q ss_pred hhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhh----hcCCch-hHHHHHHHHHHHHHHHHhh-h-------H
Q 010744 62 SVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVI----NYDRPA-VLTIGILCWAFSTAAVGAS-Q-------H 128 (502)
Q Consensus 62 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d----r~Grr~-~l~~~~~~~~~~~~~~~~~-~-------~ 128 (502)
...+.+.+.+|+++..+|.+..+..+-.++..|+.|.++| |+|||| .++.+....+++.+++... + .
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~ 102 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAK 102 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhH
Confidence 5567778888999999999999999999999999999999 899877 6667888888888777765 4 2
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhHHHHhhccC-CCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCc--ccchHHHHH
Q 010744 129 FLHVGMWRAVNGFGLAIVIPALQSFIADSYK-DGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGV--PGWRCAFIL 205 (502)
Q Consensus 129 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~--~~wr~~f~~ 205 (502)
...+.+..++..++.........++..|..+ +++|.+..+.-+.+..+|.++...+...+.+..+.+. .+|++..++
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v 182 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALV 182 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHH
Confidence 3445777777899999999999999999997 5789999999999999999877777777765433222 279999999
Q ss_pred HHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhh
Q 010744 206 MATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLPW 285 (502)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (502)
.+++.++..++..+..+|.+....++ .+....++..+.++++|.++.+....++....+
T Consensus 183 ~~iv~~v~~~i~~~~~ke~~~~~~~~---------------------~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~ 241 (428)
T PF13347_consen 183 LAIVGLVFFLITFFFVKERSVEVTEQ---------------------EKKISLRDSLRSLFRNRPFRILLLAFFLQWLAF 241 (428)
T ss_pred HHHHHHHHhhhhhheeeecccccccc---------------------ccccccccchhhhcccchHHHHHHHHHHHHhhh
Confidence 99999998888888877711111110 000123345567888999988888887776666
Q ss_pred hhH-HHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccC
Q 010744 286 TAM-VFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQ 363 (502)
Q Consensus 286 ~~~-~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (502)
... ...+.|.++ .|.+ ...+.+.....++.+++.++.++++||+|+|+... .+..+........ ...+.
T Consensus 242 ~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~-------~~~~~~~~~~~~~-~~~~~ 312 (428)
T PF13347_consen 242 ALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYI-------IGLLLAALGFLLL-FFLGP 312 (428)
T ss_pred hhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehh-------hhHHHHHHHHHHH-HHHHh
Confidence 655 566777776 5655 56677777888899999999999999999998532 1122222111111 11111
Q ss_pred CcchhHHHHHHHHHHHHHHhhhccCCCccchhcccC-------CCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcCCC
Q 010744 364 SVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVP-------AKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFGYD 436 (502)
Q Consensus 364 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 436 (502)
.+.+...+...+.|++.+.... ...++.+|..+ .+..|...|+.+....++.++++.+.|.+.+. .+|+
T Consensus 313 --~~~~~~~i~~~l~gi~~~~~~~-~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~-~Gy~ 388 (428)
T PF13347_consen 313 --GSPWLVLILFILAGIGYGAFFV-IPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLAL-VGYD 388 (428)
T ss_pred --hhHHHHHHHHHHhHhhhccccc-ccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHH-hCcC
Confidence 2345566788888888888877 78889998776 34569999999999999999999999999987 5664
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHH
Q 010744 437 SKAIDPVMGSPREALALSRGLLSMMAV 463 (502)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (502)
+.. ...+.....+++..+..+.++
T Consensus 389 ~~~---~~q~~~~~~~i~~~~~~~p~~ 412 (428)
T PF13347_consen 389 ANA---AVQSASALSGIRILFSIVPAI 412 (428)
T ss_pred CCc---CcCCHHHHHHHHHHHHHHHHH
Confidence 321 123333344444444444444
No 107
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.90 E-value=1.7e-20 Score=182.90 Aligned_cols=338 Identities=16% Similarity=0.187 Sum_probs=248.1
Q ss_pred chHHHHHHHHHHhhhcchhhhhhhhcCCch-hHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHhhhhhhhhhhhHHHH
Q 010744 78 LGYLTFIRNFVQGLSSPLAGVLVINYDRPA-VLTIGILCWAFSTAAVGAS--QHFLHVGMWRAVNGFGLAIVIPALQSFI 154 (502)
Q Consensus 78 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~-~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i 154 (502)
.++..++..+..++..|+.|.++|+-|+|| .+.+..++..+.+.++.+. ++++...+.-++.-++.+...+...+++
T Consensus 72 ~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~L 151 (477)
T PF11700_consen 72 WLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYL 151 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 467788999999999999999999999887 4555556666677776663 3455555566666678888889999999
Q ss_pred hhccCCCCc--------------------------chhhhHHHHHHhhhhhHHHHHHHHHhhhccc---CcccchHHHHH
Q 010744 155 ADSYKDGVR--------------------------GAGFGLLSLVGTMGGIGGGVLATIMAGHQFW---GVPGWRCAFIL 205 (502)
Q Consensus 155 ~~~~~~~~r--------------------------~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~---~~~~wr~~f~~ 205 (502)
.|..+++++ ++..+.-.....+|.++...+.-.+...... +..+-|..+.+
T Consensus 152 P~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~ 231 (477)
T PF11700_consen 152 PDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLI 231 (477)
T ss_pred HhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHH
Confidence 999999998 9999999999999998888877665433211 12446889999
Q ss_pred HHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhh-h
Q 010744 206 MATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSL-P 284 (502)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 284 (502)
.++--++..+..++..|+++.....+ .........+++..+..++..|.|.....++..++..- .
T Consensus 232 ~a~ww~vfsiP~~~~~~~~~~~~~~~--------------~~~~~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~ 297 (477)
T PF11700_consen 232 VALWWLVFSIPLFLWLPDRPGPRPLP--------------SGSSYLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGV 297 (477)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCC--------------cchhHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 99888888888887777755421111 00111124456777777778888888888777666544 4
Q ss_pred hhhHHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhh---h
Q 010744 285 WTAMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLT---A 360 (502)
Q Consensus 285 ~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 360 (502)
.+...+...|.++ +|++..+...+.....+.+++|+++.|++.||+|.|... .+... +.....+....++ .
T Consensus 298 ~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~---~l~~~--l~~~~~i~~~g~~G~~~ 372 (477)
T PF11700_consen 298 NTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKR---TLLIS--LILWIIIPLYGLFGFWP 372 (477)
T ss_pred HHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhH---HHHHH--HHHHHHHHHHHHHHhhh
Confidence 4445778888875 999999999999999999999999999999999998311 11111 1111111111111 1
Q ss_pred ccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcCC
Q 010744 361 IPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFGY 435 (502)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~ 435 (502)
........+.+.+..++.|+..+...+ ..-++.+|+.|+++.+.-.|++...+...+.+||.+.|.+.+.+++.
T Consensus 373 ~~~g~~~~~~f~~~a~~~G~~~G~~qs-~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~ 446 (477)
T PF11700_consen 373 SFFGLKSPWEFWVLAVLIGLFMGGIQS-ASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQ 446 (477)
T ss_pred cccCcccHHHHHHHHHHHHHHhhhHHH-HHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 111122234466677788999998888 78899999999999999999999999999999999999999998754
No 108
>PRK09848 glucuronide transporter; Provisional
Probab=99.90 E-value=3.1e-21 Score=190.81 Aligned_cols=336 Identities=11% Similarity=0.056 Sum_probs=210.2
Q ss_pred hhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhc----CCch-hHHHHHHHHHHHHHHH-Hh----hh--HH
Q 010744 62 SVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINY----DRPA-VLTIGILCWAFSTAAV-GA----SQ--HF 129 (502)
Q Consensus 62 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~----Grr~-~l~~~~~~~~~~~~~~-~~----~~--~~ 129 (502)
.+.+.+.+.+|+++.++|.+.+...+..++..++.|+++||. |||| .+..+.+...+..++. .. ++ ..
T Consensus 30 ~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (448)
T PRK09848 30 FLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKV 109 (448)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHH
Confidence 344577778899999999999999999999999999999996 7776 4455655554444432 22 11 23
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHhhccCC-CCcchhhhHHHHHHh-----hhhhHHHHHHHHHhhhcccCcccchHHH
Q 010744 130 LHVGMWRAVNGFGLAIVIPALQSFIADSYKD-GVRGAGFGLLSLVGT-----MGGIGGGVLATIMAGHQFWGVPGWRCAF 203 (502)
Q Consensus 130 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~-----~G~~~g~~~~~~l~~~~~~~~~~wr~~f 203 (502)
+.++...++.+++.+...+...++..+..++ ++|.+..++-..+.+ ++..++|.++...... ...+|....
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~---~~~~~~~~~ 186 (448)
T PRK09848 110 VYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEE---MVSVYHFWT 186 (448)
T ss_pred HHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc---hhhhHHHHH
Confidence 3345556778888888888878877777644 678887776655434 4444555554432110 001222222
Q ss_pred HHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhh
Q 010744 204 ILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSL 283 (502)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (502)
.+.++++++..++.+...||+...+.+ + ....+..+.++|+|.++...+..++...
T Consensus 187 ~~~~v~~~~~~~~~~~~~~e~~~~~~~---------------------~---~~~~~~~~~l~~n~~f~~~~~~~~~~~~ 242 (448)
T PRK09848 187 IVLAIAGMVLYFICFKSTRENVVRIVA---------------------Q---PSLKISLQTLKRNRPLFMLCIGALCVLI 242 (448)
T ss_pred HHHHHHHHHHHHHHHcCcEeccCCCcc---------------------C---CCHHHHHHHHhCCchHHHHHHHHHHHHH
Confidence 233333333333333333333211100 0 0122345668899999888777766665
Q ss_pred hhhhH-HHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhc
Q 010744 284 PWTAM-VFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAI 361 (502)
Q Consensus 284 ~~~~~-~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (502)
.+... ...|.|+++ +|.++...++......++.+++.++.+++.||+++|+.. ..+..+..... +.+..
T Consensus 243 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~-------~~g~~~~~i~~-~~~~~- 313 (448)
T PRK09848 243 STFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTF-------LIGALLGTCGY-LLFFW- 313 (448)
T ss_pred HHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH-------HHHHHHHHHHH-HHHHH-
Confidence 55444 556777776 787766655555555667788899999999999988732 22222221111 11111
Q ss_pred cCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCC-------chhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcC
Q 010744 362 PQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAK-------HRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFG 434 (502)
Q Consensus 362 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~-------~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~ 434 (502)
... ...+......++.|++.+...+ ...++..|..|.+ .+|...|+.+....+|.++++.+.|.+.+. .+
T Consensus 314 ~~~-~~~~~~~~~~~l~g~G~~~~~~-~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~-~G 390 (448)
T PRK09848 314 VSV-WSLPVALVALAIASIGQGVTMT-VMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGL-SG 390 (448)
T ss_pred cCc-hhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-cC
Confidence 111 2233344556667777777766 5677777776543 469999999999999999999999999987 56
Q ss_pred CC
Q 010744 435 YD 436 (502)
Q Consensus 435 ~~ 436 (502)
|+
T Consensus 391 ~~ 392 (448)
T PRK09848 391 YI 392 (448)
T ss_pred CC
Confidence 64
No 109
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.89 E-value=6.8e-20 Score=178.19 Aligned_cols=378 Identities=14% Similarity=0.092 Sum_probs=220.2
Q ss_pred HHHHHHHHHHHHHhhhhchhhHHHH-HhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhc-CCchhHHHHHHHHHHHH
Q 010744 43 LILINLAAIMERADENLLPSVYKEV-SEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINY-DRPAVLTIGILCWAFST 120 (502)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~ 120 (502)
+..++...+...+..+.....+|.+ .+++|.++.+.+.+.+.+.....++.+++|+++||+ ||||+++++.++.+++.
T Consensus 11 l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~ 90 (493)
T PRK15462 11 IYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGH 90 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHH
Confidence 3444445555555555555555554 567899999999999999999999999999999999 99999999999999998
Q ss_pred HHHHhhh-HHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCC--CcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcc
Q 010744 121 AAVGASQ-HFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDG--VRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVP 197 (502)
Q Consensus 121 ~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~ 197 (502)
++.+..+ +...+.++..+.++|.|...+...++++|.+|++ +|..+.++...+.++|..++|.+.+++.+. .
T Consensus 91 lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~-----~ 165 (493)
T PRK15462 91 VVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEE-----Y 165 (493)
T ss_pred HHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhh-----h
Confidence 8776543 2233444445555666777788889999999876 699999999999999999999999999887 8
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhccCC-cccc-CCCCCC-CCCCchhh-------------HhhhcCCCcchhHHH----
Q 010744 198 GWRCAFILMATLSVLIAFLVLVFVVDP-RKKA-STFHGT-GENFDRDE-------------LVEKGNTSVSSVWLE---- 257 (502)
Q Consensus 198 ~wr~~f~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~-~~~~~~~~-------------~~~~~~~~~~~~~~~---- 257 (502)
|||+.|.+.++. .+.+++.++.-.+. ++.. .++++. +++..... ..............-
T Consensus 166 Gw~~~F~iaaig-m~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (493)
T PRK15462 166 SWAMGFGLAAVG-MIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVAT 244 (493)
T ss_pred ChHHHHHHHHHH-HHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999987654 34444333332211 1100 000000 00000000 000000000000000
Q ss_pred ------hHH-HHhhh--cchhHHHHHHHHHHh---hhhhhhhH-HHHHHHHHH------hCCChhhHHHHHHHHHhhhcc
Q 010744 258 ------SWM-ATKAV--IKVPTFQIIVLQGIV---GSLPWTAM-VFFTMWFEL------IGFDHSSTAALLSLFAIGCAV 318 (502)
Q Consensus 258 ------~~~-~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~------~g~s~~~~~~~~~~~~~~~~~ 318 (502)
... ..++. -.+++.+..+..... .+..+... +-+..|.++ .|+. ...+++.++..+..++
T Consensus 245 ~~~~~~~~~~~~~~~~~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii~ 323 (493)
T PRK15462 245 IIGLGVLAKIYRKAENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVML 323 (493)
T ss_pred HHHHHHHHHHHHhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHHHHH
Confidence 000 00000 001222222222222 22222222 234444433 2322 2356677777777777
Q ss_pred cccchhhhhhhhcc--ccCCcchhHHhhhhhhhhhhHHHHHh--hhccC-CcchhHHHHHHHHHHHHHHhhhccCCCccc
Q 010744 319 GSFLGGVVADRISQ--AYPHSGRVMCAQFSAFMGIPFSWFLL--TAIPQ-SVSNYYTYAVTLVLMGLTISWNATAANGPM 393 (502)
Q Consensus 319 ~~~~~g~l~d~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 393 (502)
..++.+++=.|..+ |.+.. .........++++....+.+ ..... ...+.+.++...++..++.-...| +..++
T Consensus 324 l~P~~a~lw~~l~~~~~~~s~-~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sP-vgls~ 401 (493)
T PRK15462 324 CGVFLAWVVKESVAGNRTVRI-WGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDP-VAMSQ 401 (493)
T ss_pred HHHHHHHHHHHHhcCCCCCCc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHCh-HHHHH
Confidence 77777777666633 22211 11111111111111111111 11111 112334466777888889888888 89999
Q ss_pred hhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 394 FAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 394 ~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
++++.|++.+|..+|..... .+++++.+.|.+.+..
T Consensus 402 ~~~laP~~~~g~~mg~w~l~---~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 402 ITRIEIPGVTGVLTGIYMLL---SGAIANYLAGVIADQT 437 (493)
T ss_pred HHHhChHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHh
Confidence 99999999999999998332 3356777777776664
No 110
>PRK11462 putative transporter; Provisional
Probab=99.89 E-value=1.9e-20 Score=184.63 Aligned_cols=338 Identities=13% Similarity=0.123 Sum_probs=223.9
Q ss_pred hhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhh----cCCch-hHHHHHHHHHHHHHHHHhhhH------HH
Q 010744 62 SVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVIN----YDRPA-VLTIGILCWAFSTAAVGASQH------FL 130 (502)
Q Consensus 62 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~~~~------~~ 130 (502)
.+...+.+..|+++..+|.+..+.-+--++.-|+.|+++|| +|||| .++++....+++.+++-..++ ..
T Consensus 31 ~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~ 110 (460)
T PRK11462 31 YMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMI 110 (460)
T ss_pred HHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHH
Confidence 35566778889999999999999999999999999999996 79876 566677777777766544442 44
Q ss_pred HHHHHHHHHhhhhhhhhhhhHHHHhhccC-CCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcc--cCcccchHHHHHHH
Q 010744 131 HVGMWRAVNGFGLAIVIPALQSFIADSYK-DGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQF--WGVPGWRCAFILMA 207 (502)
Q Consensus 131 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~--~~~~~wr~~f~~~~ 207 (502)
.+.+.-++..++.......-.++..|..+ ++||++..++...+..+|..+++.+...+....+ ....+|+....+.+
T Consensus 111 y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ 190 (460)
T PRK11462 111 YAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLS 190 (460)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHH
Confidence 56666777888889888888999999997 6899999999999999999888888766554321 11247888888888
Q ss_pred HHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhhhh
Q 010744 208 TLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLPWTA 287 (502)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (502)
++.+++..+.+...+|++...++ +. ...+..+..++++.++.++...++.......
T Consensus 191 ii~~i~~~i~~~~~kE~~~~~~~---------------------~~---~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~ 246 (460)
T PRK11462 191 VVAFMMLAFCFFTTKERVEAPPT---------------------TT---SMREDLRDIWQNDQWRIVGLLTIFNILAVCV 246 (460)
T ss_pred HHHHHHHHHHHhcceeccCCCcc---------------------CC---CHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 87777776666655543211100 00 1223456678888887776555444443333
Q ss_pred H-HHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCc
Q 010744 288 M-VFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSV 365 (502)
Q Consensus 288 ~-~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (502)
. .....|.+. .|. +...+.+.....++.+++.++++++.||+++|+.. ... .....+.. +.+...+. .
T Consensus 247 ~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~-----~~~--~~~~~~~~-~~~~~~~~-~ 316 (460)
T PRK11462 247 RGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIF-----WWT--NALLAVIS-LAMFFVPM-Q 316 (460)
T ss_pred HHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH-----HHH--HHHHHHHH-HHHHHhch-h
Confidence 3 223333333 332 33445566677788888999999999999988631 111 11111111 11122221 1
Q ss_pred chhHHHHHHHHHHHHHHhhhccCCCccchhcccC-------CCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcCCC
Q 010744 366 SNYYTYAVTLVLMGLTISWNATAANGPMFAEVVP-------AKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFGYD 436 (502)
Q Consensus 366 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 436 (502)
+ .....+..++.|++.+...+ +..++..|..+ .+..|...+.......++.++++.+.|.+.+. .+|+
T Consensus 317 ~-~~~~~~~~~l~g~~~~~~~~-l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~-~Gy~ 391 (460)
T PRK11462 317 A-SITMFVFIFVIGVLHQLVTP-IQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAY-GGYD 391 (460)
T ss_pred H-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCC
Confidence 1 22223344455666555444 45667777654 33446666777799999999999999999997 5775
No 111
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.89 E-value=1.4e-20 Score=176.50 Aligned_cols=347 Identities=13% Similarity=0.093 Sum_probs=225.9
Q ss_pred HHHHHHHhhhhchhhHHHHHh-hcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHH--H-HHHHHHH
Q 010744 49 AAIMERADENLLPSVYKEVSE-AFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCW--A-FSTAAVG 124 (502)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~i~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~--~-~~~~~~~ 124 (502)
.++...+..+..-+..+...+ +.|+|.+++|.+.++..+...+.+|+.|.++||.|.||-++..+.+. . ...+...
T Consensus 15 ~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v 94 (412)
T PF01306_consen 15 FYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYV 94 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 344444445566666666555 58999999999999999999999999999999999887544333222 2 2222223
Q ss_pred hhh----HH-HHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccc
Q 010744 125 ASQ----HF-LHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGW 199 (502)
Q Consensus 125 ~~~----~~-~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~w 199 (502)
+.| |. ...+++-+..|+......|+..+++.++. ++.+.-.|-...+.++|.+++..++|.+.+. +-
T Consensus 95 ~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i------~p 166 (412)
T PF01306_consen 95 FGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNI------NP 166 (412)
T ss_dssp HHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH------HH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeee------Cc
Confidence 322 22 22334444455656666677777777775 6667788889999999999999999999874 45
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHH
Q 010744 200 RCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGI 279 (502)
Q Consensus 200 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (502)
+..||+....+++..++.++..++.+......+.+++ ++ .+...+...+++|+|++|.+++...
T Consensus 167 ~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~--------------~~--~~~~~~~~~~l~k~~~fw~~~l~v~ 230 (412)
T PF01306_consen 167 NIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGA--------------KK--DKVSLKDVLSLFKMRNFWFFVLFVI 230 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS----------------------HHHHHHHTTSHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhccccc--------------CC--CCCcHHHHHHHhcchhHHHHHHHHH
Confidence 7788877666666655555544432222111100000 00 0112344567899999999888776
Q ss_pred hhhhhhhhH-HHHHHHHHH----hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHH
Q 010744 280 VGSLPWTAM-VFFTMWFEL----IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFS 354 (502)
Q Consensus 280 ~~~~~~~~~-~~~~~~~~~----~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 354 (502)
.....+... ...|.|... .+.+....|.+.+...+.+++...+..++.+|+|.|+. .+++..+.
T Consensus 231 g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~-----------Lllag~i~ 299 (412)
T PF01306_consen 231 GVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNL-----------LLLAGVIM 299 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-----------HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhH-----------HHHHHHHH
Confidence 665555555 446666654 34555678889999999999999999999999999983 12222222
Q ss_pred HHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHH-HHhhhhhhhhhHHHHHHHHHHh
Q 010744 355 WFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFD-RAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~-~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
.+=+......++ .+.+...-.+-++-...... ...-++.+.+|++..++...+. +...+++..+.+.+.|.++|+.
T Consensus 300 ~iRi~~~~~~~~-~~~i~~~klLH~~e~~l~lv-a~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~ 376 (412)
T PF01306_consen 300 AIRIIGSGFATN-PWVISLIKLLHALEFPLLLV-AAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRI 376 (412)
T ss_dssp HHHHHHHHT--S-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhcc-hHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhc
Confidence 222222223333 34466777777777766666 5788999999999999999986 5777888889999999999997
No 112
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.88 E-value=2.4e-19 Score=169.64 Aligned_cols=378 Identities=13% Similarity=0.150 Sum_probs=276.1
Q ss_pred hhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhh----cCCch-hHHHHHHHHHHHHHHHHhhhH------HH
Q 010744 62 SVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVIN----YDRPA-VLTIGILCWAFSTAAVGASQH------FL 130 (502)
Q Consensus 62 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~~~~------~~ 130 (502)
.++-.+.+.+|+++..+|.+..+--+--++.-|+.|.+.|| +||+| .++.+.+..++.+.++-.+++ ..
T Consensus 34 yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ 113 (467)
T COG2211 34 YLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLI 113 (467)
T ss_pred HHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchH
Confidence 34455677889999999999999999999999999999995 78765 778888888888888877763 34
Q ss_pred HHHHHHHHHhhhhhhhhhhhHHHHhhccC-CCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccC--cccchHHHHHHH
Q 010744 131 HVGMWRAVNGFGLAIVIPALQSFIADSYK-DGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWG--VPGWRCAFILMA 207 (502)
Q Consensus 131 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~--~~~wr~~f~~~~ 207 (502)
..++.-.+.+++.......-.++..++.+ ++||.+..++-+.+..+|..+...+...+....+.+ ..||+..-.+.+
T Consensus 114 ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~ 193 (467)
T COG2211 114 YALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLG 193 (467)
T ss_pred HHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHH
Confidence 45667788999999999888899999884 689999999999999999888888877776654422 579999999999
Q ss_pred HHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhhhh
Q 010744 208 TLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLPWTA 287 (502)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (502)
+++.+..+.+++-.+|+..+..+.++ ...++....+...++|+.+...++..++.......
T Consensus 194 vi~~i~~l~~~~~v~ER~~~~~~~~~-------------------~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i 254 (467)
T COG2211 194 VIGVILLLFCFFNVKERVVETQPTKT-------------------GVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNI 254 (467)
T ss_pred HHHHHHHHHHHHHhhcccCccccCcc-------------------cccccHHHHHHHHHccchHHHHHHHHHHHHHHHHH
Confidence 99988888888877775542221100 00122334455688899998888877766666555
Q ss_pred H-HHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCc
Q 010744 288 M-VFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSV 365 (502)
Q Consensus 288 ~-~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (502)
. +....|.+. +|.+.............+.+++.++..++.+|+|+|+.. ..+.++..+.. ..++..+ .
T Consensus 255 ~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~-------~~~~~~~~i~~-~~~~f~~--~ 324 (467)
T COG2211 255 RGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLF-------LIGLLLLAVGY-LLLYFTP--A 324 (467)
T ss_pred HhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHH-------HHHHHHHHHHH-HHHHhhc--C
Confidence 5 556666665 888888888888888888888899999999999999842 22222222222 2222223 3
Q ss_pred chhHHHHHHHHHHHHHHhhhccCCCccchhccc-------CCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcCCCCC
Q 010744 366 SNYYTYAVTLVLMGLTISWNATAANGPMFAEVV-------PAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFGYDSK 438 (502)
Q Consensus 366 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-------p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~ 438 (502)
+.....++..++.+++.+...+ +.+++++|.. +.+..|...|...++..+|.+++..+.|++.+. .+|.+.
T Consensus 325 ~~~~l~~~~~~i~~~g~~~~~~-l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~-~Gyv~~ 402 (467)
T COG2211 325 GSVVLIVVALIIAGVGTGIANP-LPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGA-IGYVPN 402 (467)
T ss_pred cchHHHHHHHHHHHHHhhcccc-ccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCCC
Confidence 3345555666777788887777 7888888864 445668999999999999999999999999999 566432
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 010744 439 AIDPVMGSPREALALSRGLLSMMAVPFGLCCLFYT 473 (502)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (502)
. .++......++...+.+.-++..+++.+...
T Consensus 403 ~---~~Q~~~al~gI~~~~~~~Pa~l~l~~~i~~~ 434 (467)
T COG2211 403 V---SAQSASALFGIRFLFIILPALLLLLAAIIIF 434 (467)
T ss_pred c---ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1344455566666666665554544444444
No 113
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.87 E-value=1.6e-19 Score=177.97 Aligned_cols=420 Identities=16% Similarity=0.194 Sum_probs=299.2
Q ss_pred HHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHH
Q 010744 41 LSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFST 120 (502)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 120 (502)
..+.++++..+...+....+...+..+.+.|+++.++.|++.+.+-++..+...+..+...|.-|-+.+-+|.+++++++
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgs 176 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGS 176 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHH
Confidence 45566777777777777788889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhh-----------H----------------------------------------HH-HHHHHHHHHhhhhhhhhh
Q 010744 121 AAVGASQ-----------H----------------------------------------FL-HVGMWRAVNGFGLAIVIP 148 (502)
Q Consensus 121 ~~~~~~~-----------~----------------------------------------~~-~l~~~r~l~G~~~~~~~~ 148 (502)
+++++-+ + ++ .++++.++.|+|....++
T Consensus 177 ll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t 256 (735)
T KOG3626|consen 177 LLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT 256 (735)
T ss_pred HHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc
Confidence 9998720 0 22 467889999999999999
Q ss_pred hhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcc-c---------Cc----ccchHHHHHHHHHHHHHH
Q 010744 149 ALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQF-W---------GV----PGWRCAFILMATLSVLIA 214 (502)
Q Consensus 149 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~-~---------~~----~~wr~~f~~~~~~~~~~~ 214 (502)
...+|+-|...+++-...+|+......+|.++|-++++++....- . .+ .-|..-|++.+.+.++.+
T Consensus 257 lGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a 336 (735)
T KOG3626|consen 257 LGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSA 336 (735)
T ss_pred CCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999875411 0 00 137788899999999999
Q ss_pred HHHHHhccCCccccCCCCCCCCCCchhhH-hhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhhhhH-HHHH
Q 010744 215 FLVLVFVVDPRKKASTFHGTGENFDRDEL-VEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLPWTAM-VFFT 292 (502)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 292 (502)
+..+++|++.+...++.+.++.+....+. ..+.........++..+..+++++||.+...++...+....+..+ +|+|
T Consensus 337 ~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlP 416 (735)
T KOG3626|consen 337 VPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLP 416 (735)
T ss_pred HHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhH
Confidence 99999998866543321111111111110 111222223456788888999999999999999888877766555 8999
Q ss_pred HHHHH-hCCChhhHHHHHHHHHhh-hcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhh-c--------
Q 010744 293 MWFEL-IGFDHSSTAALLSLFAIG-CAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTA-I-------- 361 (502)
Q Consensus 293 ~~~~~-~g~s~~~~~~~~~~~~~~-~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------- 361 (502)
.|++. +|.++..+..+.....+. ..+|.+++|++.+|+..+..-. ..+.++..++.+.+....++. .
T Consensus 417 KyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~--a~~~~~~~~l~l~~~~~~~~igC~~~~~aG~ 494 (735)
T KOG3626|consen 417 KYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGA--AKFVIVCSVLSLLFYSLLFFIGCESSPVAGV 494 (735)
T ss_pred HHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHH--HHHHHHHHHHHHHHHHHHHEecCCCCcccce
Confidence 99987 999999999998766654 4667889999999986543211 122222222222221111100 0
Q ss_pred -----------c-------------------------------------------CC------------------c----
Q 010744 362 -----------P-------------------------------------------QS------------------V---- 365 (502)
Q Consensus 362 -----------~-------------------------------------------~~------------------~---- 365 (502)
. .. +
T Consensus 495 ~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~~~ytnCsCv~~~~~~~~~a~ 574 (735)
T KOG3626|consen 495 TNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGNTIYTNCSCVPTNKNGNGSAK 574 (735)
T ss_pred ecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCceeeccccccccccCCCceee
Confidence 0 00 0
Q ss_pred --------chhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhh-hhHHHHHHHHHHhcC-C
Q 010744 366 --------SNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSS-FAAPLVGILSEKMFG-Y 435 (502)
Q Consensus 366 --------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~-~~~~~~g~l~~~~~~-~ 435 (502)
......+++.+..+.+.+....+..+.++.+.+|+++|..++|+..++..+.+. -+|.+.|++.|...- |
T Consensus 575 ~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~ID~tCl~W 654 (735)
T KOG3626|consen 575 KGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVIDTTCLLW 654 (735)
T ss_pred cCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhhhHhhHHHHh
Confidence 011122233333443333333224677778889999999999999888876555 899999999998743 4
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHHHHH
Q 010744 436 DSKAIDPVMGSPREALALSRGLLSMMA 462 (502)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (502)
+...........++...+++.++.+.+
T Consensus 655 ~~~C~~~GsC~iYd~~~lr~~y~gl~~ 681 (735)
T KOG3626|consen 655 GKSCGSRGSCLIYDNDSLRYRYLGLHI 681 (735)
T ss_pred hcccCCCCceeeechHHHHHHHHHHHH
Confidence 444334444455666777775444433
No 114
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.86 E-value=5.8e-20 Score=171.20 Aligned_cols=272 Identities=14% Similarity=0.098 Sum_probs=190.4
Q ss_pred HhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhccc---------
Q 010744 124 GASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFW--------- 194 (502)
Q Consensus 124 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~--------- 194 (502)
+...+|+.++++-++.|.|.+...+..+.++++..++|++++.+++.+..+++|..++|.+++.+......
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 35678999999999999999999999999999999999999999999999999999999999988743100
Q ss_pred --CcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHH
Q 010744 195 --GVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQ 272 (502)
Q Consensus 195 --~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (502)
...+||++|++.+.+.++..++..+. +-|+.+.+++ ++ ... ++ . ...++.+++|.++
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~-~~p~~~~~~~---~~-~~~-------~~--~-------~~~~~~~~~~~~~ 143 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFL-PLPELQEADV---AR-VSS-------GD--T-------TQKTSAFQFTHLV 143 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHc-cCCCCCcccc---cc-ccc-------cc--c-------cchhhHHhhHHHH
Confidence 01479999998777766655544443 2222111100 00 000 00 0 0011245567777
Q ss_pred HHHHHHHhhhhhh-hhHHHHHHHHHH---hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhh
Q 010744 273 IIVLQGIVGSLPW-TAMVFFTMWFEL---IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAF 348 (502)
Q Consensus 273 ~~~~~~~~~~~~~-~~~~~~~~~~~~---~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 348 (502)
...+..++..... +...|.+.|+++ +|+++.+++...+....+.++|+++.+++.||+++|+.. ..+..
T Consensus 144 l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l-------~~~~~ 216 (310)
T TIGR01272 144 LGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYL-------AFNAF 216 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH-------HHHHH
Confidence 7666666665444 444899999975 599999999999999999999999999999999988731 12222
Q ss_pred hhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHH
Q 010744 349 MGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGIL 428 (502)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l 428 (502)
++.... +.... . +.. . ......+.|++.+..+| ...+...+..|+ +.+++.++. ....+|+++.|.+.|.+
T Consensus 217 l~~~~~-~l~~~-~--~~~-~-~~~~~~l~g~~~s~i~P-~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~l 287 (310)
T TIGR01272 217 LAVLLS-IGAAL-T--HGY-V-AMWFVLALGLFNSIMFP-TIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSL 287 (310)
T ss_pred HHHHHH-HHHHH-c--CCH-H-HHHHHHHHHHHHHHHHH-HHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHH
Confidence 222211 11111 1 111 1 22355578888888888 567777776764 456777775 67789999999999999
Q ss_pred HHHh
Q 010744 429 SEKM 432 (502)
Q Consensus 429 ~~~~ 432 (502)
.|..
T Consensus 288 ad~~ 291 (310)
T TIGR01272 288 ADCL 291 (310)
T ss_pred HHhc
Confidence 9985
No 115
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.82 E-value=6.8e-22 Score=195.37 Aligned_cols=387 Identities=14% Similarity=0.205 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHH
Q 010744 44 ILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAV 123 (502)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 123 (502)
+.+++..++...........+..+++.|+++.++.|++.+.+-++..+..++..++.+|..|-|.+-+|.++.+++++++
T Consensus 6 ~~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~ 85 (539)
T PF03137_consen 6 VFLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLF 85 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHH
Confidence 44455555556666677888999999999999999999999999999999999999999999999999999999999988
Q ss_pred Hhh----h----------------------------------------------HHHHHHHHHHHHhhhhhhhhhhhHHH
Q 010744 124 GAS----Q----------------------------------------------HFLHVGMWRAVNGFGLAIVIPALQSF 153 (502)
Q Consensus 124 ~~~----~----------------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~ 153 (502)
++= + -+..++++.++.|+|....++...+|
T Consensus 86 ~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tY 165 (539)
T PF03137_consen 86 ALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITY 165 (539)
T ss_dssp ------------------------------------------------------------------SSS-----------
T ss_pred hccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeee
Confidence 761 0 03457889999999999999999999
Q ss_pred HhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhc-c---c---------Cc----ccchHHHHHHHHHHHHHHHH
Q 010744 154 IADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQ-F---W---------GV----PGWRCAFILMATLSVLIAFL 216 (502)
Q Consensus 154 i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-~---~---------~~----~~wr~~f~~~~~~~~~~~~~ 216 (502)
+-|..++++-+..+|+..+...+|.++|-++++.+.... + . ++ ..|..-|++.+++.++.++.
T Consensus 166 iDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aip 245 (539)
T PF03137_consen 166 IDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIP 245 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998876431 0 0 01 13777888888888888888
Q ss_pred HHHhccCCccccCCCCC-CCCCCchh--hHhh-hcC---CCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhhhhH-
Q 010744 217 VLVFVVDPRKKASTFHG-TGENFDRD--ELVE-KGN---TSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLPWTAM- 288 (502)
Q Consensus 217 ~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 288 (502)
.+.+|++-+...+..++ +.++...+ +... .+. .......++..+..+++++||.+....+...........+
T Consensus 246 l~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~ 325 (539)
T PF03137_consen 246 LFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFA 325 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Confidence 88888875444111111 11000000 0000 011 1122456777888899999999999988888776655444
Q ss_pred HHHHHHHHH-hCCChhhHHHHHHHHHh-hhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhH-HHHHhhh-----
Q 010744 289 VFFTMWFEL-IGFDHSSTAALLSLFAI-GCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPF-SWFLLTA----- 360 (502)
Q Consensus 289 ~~~~~~~~~-~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----- 360 (502)
+|+|.|+|. ++.++.+++++.....+ ++++|.+++|++.+|++-+.... .....+..++.... ....++.
T Consensus 326 tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~--~~~~~v~~~v~~~~~~~~~~~~C~~~~ 403 (539)
T PF03137_consen 326 TFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGA--AKFCIVVSIVSVILYSPLFFLGCPNPP 403 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHH--HHHHHHHHHHHHHHHHHHHeecCCCCc
Confidence 899999987 99999999988776655 66788999999999986543321 11222222222221 1111100
Q ss_pred -----ccC----------------------------------C-cchhHHHHHHHHHHHHHHhhhccCCCccchhcccCC
Q 010744 361 -----IPQ----------------------------------S-VSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPA 400 (502)
Q Consensus 361 -----~~~----------------------------------~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~ 400 (502)
.+. . ...+..+.+.+++.-+..+....| .....-+.+|+
T Consensus 404 ~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p-~~~i~LR~V~~ 482 (539)
T PF03137_consen 404 IAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVP-STLITLRCVPP 482 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccc-hheeeeccCCh
Confidence 000 0 011222323333333333444442 45556688999
Q ss_pred CchhhHHHHHHHhhhhhh-hhhHHHHHHHHHHhc
Q 010744 401 KHRTMIYAFDRAFEGSFS-SFAAPLVGILSEKMF 433 (502)
Q Consensus 401 ~~~~~~~g~~~~~~~~~~-~~~~~~~g~l~~~~~ 433 (502)
++|+.+.|+...+..+.+ .-+|.+.|.+.|...
T Consensus 483 ~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~tC 516 (539)
T PF03137_consen 483 EQRSFALGVQWLIIRLLGFIPGPIIFGAIIDSTC 516 (539)
T ss_dssp ----------------------------------
T ss_pred hhcchhhhHHHHHHHhhcCcchHHHHhHHHhhhh
Confidence 999999999998877655 599999999999864
No 116
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.82 E-value=5.7e-18 Score=155.19 Aligned_cols=331 Identities=13% Similarity=0.097 Sum_probs=246.6
Q ss_pred CCchHHHHHHHHHHhhhcchhhhhhhhcCCch-hHHHHHHHHHHHHHHHHhhhH---HHHHHHHHHHHhhhhhhhhhhhH
Q 010744 76 SDLGYLTFIRNFVQGLSSPLAGVLVINYDRPA-VLTIGILCWAFSTAAVGASQH---FLHVGMWRAVNGFGLAIVIPALQ 151 (502)
Q Consensus 76 ~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~-~l~~~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~~~~~~~~~~~ 151 (502)
+..+...++..+..++.+|+.|.++|+.|+|| .+-....+..+..++..++++ ++..++.-.+..++.....+.-.
T Consensus 58 a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyd 137 (438)
T COG2270 58 AYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYD 137 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehh
Confidence 34678889999999999999999999999887 455555666666666777654 44556678889999999999999
Q ss_pred HHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhc-------------ccCcccchHHHHHHHHHHHHHHHHHH
Q 010744 152 SFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQ-------------FWGVPGWRCAFILMATLSVLIAFLVL 218 (502)
Q Consensus 152 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-------------~~~~~~wr~~f~~~~~~~~~~~~~~~ 218 (502)
+++.+..++++-++..++-.....+|..+--++........ ..+...-|.++.+.++--++..+..+
T Consensus 138 s~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~ 217 (438)
T COG2270 138 SMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMI 217 (438)
T ss_pred hHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHH
Confidence 99999999999999988888888888877665543222110 01335678888888888888888888
Q ss_pred HhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhh-hhhhhhHHHHHHHHH-
Q 010744 219 VFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVG-SLPWTAMVFFTMWFE- 296 (502)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~- 296 (502)
+..++++....+. ...-...+++.+..+++..+++.+...++..++. -...+...+...|..
T Consensus 218 ~~v~~~~~~~~~~----------------~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~ 281 (438)
T COG2270 218 LNVHDAEKISSPP----------------PTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAA 281 (438)
T ss_pred hcccccccccccc----------------hHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 8877766432111 0112245677778888888888887777766554 445556678888887
Q ss_pred HhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHH
Q 010744 297 LIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLV 376 (502)
Q Consensus 297 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (502)
++|++..+..++.....+.+++|+++.|++.||++.|+... .++++....+...+ .... ...+.+..+
T Consensus 282 ~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~-------~~lvi~~~~~~~~~--~~~~---~~~f~i~gl 349 (438)
T COG2270 282 DLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLM-------IGLVILSIAALYLI--FLEG---ELDFWILGL 349 (438)
T ss_pred HcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeh-------HHHHHHHHHHHHHH--Hccc---cHHHHHHHH
Confidence 59999999999999999999999999999999999996421 11111111111111 1111 122445667
Q ss_pred HHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcCC
Q 010744 377 LMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFGY 435 (502)
Q Consensus 377 ~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~ 435 (502)
+.|++.+..+. ..-++..+.+|+++.++..|+++..+...+.+||.+.+.+.+.+++.
T Consensus 350 l~g~s~G~~qA-~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~ 407 (438)
T COG2270 350 LVGTSLGGAQA-SSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSS 407 (438)
T ss_pred HHHHhcchHHH-HHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcch
Confidence 78888888887 78899999999999999999999999999999999999999998754
No 117
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.79 E-value=1.6e-17 Score=157.63 Aligned_cols=191 Identities=15% Similarity=0.078 Sum_probs=154.7
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhh--cCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCC-chhHHHH
Q 010744 36 VLGISLSLILINLAAIMERADENLLPSVYKEVSEA--FNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDR-PAVLTIG 112 (502)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~l~~~ 112 (502)
++.+|+.+.+..+..++.....+.+.+..-++.++ .+.+.+..|++.++..++.+++++..|++..|.+. |+.++.+
T Consensus 29 ~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s 108 (488)
T KOG2325|consen 29 RKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVS 108 (488)
T ss_pred cCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHH
Confidence 46688888888888999888887776665555555 66778889999999999999999999999999997 8899999
Q ss_pred HHHHHHHHHHH-Hhh---h-HHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHH
Q 010744 113 ILCWAFSTAAV-GAS---Q-HFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATI 187 (502)
Q Consensus 113 ~~~~~~~~~~~-~~~---~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~ 187 (502)
.++..++.++. ++. + +.+.++++|++.|+|.+. .....+++++-...++|.++++....+..+|.++||.+...
T Consensus 109 ~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~ 187 (488)
T KOG2325|consen 109 FLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLA 187 (488)
T ss_pred HHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHH
Confidence 99999999988 432 3 678899999999999554 56667999999999999999999999999999999999988
Q ss_pred Hhhhccc-----Ccc---cchHHHHHHHHHHHHHHHHHHHhccCCccc
Q 010744 188 MAGHQFW-----GVP---GWRCAFILMATLSVLIAFLVLVFVVDPRKK 227 (502)
Q Consensus 188 l~~~~~~-----~~~---~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~ 227 (502)
+...... ... -+..+-|+.+++.++..++..+..+|++..
T Consensus 188 f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~ 235 (488)
T KOG2325|consen 188 FTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRG 235 (488)
T ss_pred HhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccC
Confidence 7654210 001 123566888888888888877777775543
No 118
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.76 E-value=8.2e-16 Score=141.71 Aligned_cols=333 Identities=14% Similarity=0.109 Sum_probs=232.1
Q ss_pred HHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcC-----Cch-hHHHHHHHHHHHHHHHHhh-----h--------
Q 010744 67 VSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYD-----RPA-VLTIGILCWAFSTAAVGAS-----Q-------- 127 (502)
Q Consensus 67 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G-----rr~-~l~~~~~~~~~~~~~~~~~-----~-------- 127 (502)
+..|++++....+.+.++..+..- ..+.+|+.+|+.+ ||. .+..|.++.+.+..+..++ .
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 567899998889999888887755 6889999999998 775 5666777777766666552 2
Q ss_pred HH-H--HHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccc-h--H
Q 010744 128 HF-L--HVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGW-R--C 201 (502)
Q Consensus 128 ~~-~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~w-r--~ 201 (502)
.+ + ...+.-.+.|+|.+...+...++++|..|+|+|+++.++.....-+|.+++..+.+.+.+. ++- | .
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~-----~s~~rL~~ 159 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDP-----FSPERLIQ 159 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccc-----cCHHHHHH
Confidence 22 2 2355678899999999999999999999999999999999999999999999999988764 322 2 2
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhh
Q 010744 202 AFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVG 281 (502)
Q Consensus 202 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (502)
.+...+++.++..++..+-.|.+.....+. + ++++.+ .....++++.+|....+....+..
T Consensus 160 v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~-~---------------~~~~~~---f~~a~~~~~~~~~a~~f~~fl~l~ 220 (403)
T PF03209_consen 160 VIQGVALIALLLNLIALWGQEPRRSRRAAA-A---------------ERPRPP---FREAWRQVWASPQARRFFVFLFLG 220 (403)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCcccccC-C---------------CCCCcc---HHHHHHHHHhCCChhHHHHHHHHH
Confidence 333334444444444444443322221111 0 011112 223344556677777776666666
Q ss_pred hhhhhhH-HHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhh-hccccCCcchhHHhhhhhhhhhhHHHHHh
Q 010744 282 SLPWTAM-VFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADR-ISQAYPHSGRVMCAQFSAFMGIPFSWFLL 358 (502)
Q Consensus 282 ~~~~~~~-~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (502)
...+... ..+-.|--+ +|++..+...+......+.++|....|++..| .++++ ....++..+........
T Consensus 221 t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~-------~a~~G~~~~~~~f~lii 293 (403)
T PF03209_consen 221 TLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKR-------TAALGCLLGALAFALII 293 (403)
T ss_pred HHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchH-------HHHHHHHHHHHHHHHHH
Confidence 5555555 456666655 99999999999999999999999999987774 33333 22233333333332222
Q ss_pred hhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcC
Q 010744 359 TAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFG 434 (502)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~ 434 (502)
..-... +.+.+....+++|++.+.... ...+.+.+..++++.|..+|.....+.+...++..++|.+.|....
T Consensus 294 ~a~~~~--~~~~~~~~~~l~G~g~G~f~v-gals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~ 366 (403)
T PF03209_consen 294 LAGPLG--SPWLFRPGVFLLGLGNGLFTV-GALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRA 366 (403)
T ss_pred HHHhcc--cchHHHHHHHHHHHhhhHHHH-HHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222 244566778888998888777 5677778888889999999999999999999999999999998643
No 119
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.72 E-value=4.7e-15 Score=139.37 Aligned_cols=377 Identities=14% Similarity=0.130 Sum_probs=232.8
Q ss_pred HHHHHHHHHHHHHHHhhhhch-hhHHHHHhhcC----CCCCCchHHHHHHHHHHhhhcchhhhhhhh-cCCchhHHHHHH
Q 010744 41 LSLILINLAAIMERADENLLP-SVYKEVSEAFN----AGPSDLGYLTFIRNFVQGLSSPLAGVLVIN-YDRPAVLTIGIL 114 (502)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~----~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~ 114 (502)
+.+..++...+...++.+... .+.-++..+++ .++++..-+.+.|..---+..+++||++|| .|+|++++.|.+
T Consensus 21 r~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGai 100 (498)
T COG3104 21 RGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAI 100 (498)
T ss_pred chHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Confidence 344556666777777665544 44455556666 999998888888888878888999999999 599999999999
Q ss_pred HHHHHHHHHHhhh--HHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCC--CcchhhhHHHHHHhhhhhHHHHHHHHHhh
Q 010744 115 CWAFSTAAVGASQ--HFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDG--VRGAGFGLLSLVGTMGGIGGGVLATIMAG 190 (502)
Q Consensus 115 ~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 190 (502)
+..+|-++.+.++ +...++++-.+.++|.|..=+....+++|.+|++ +|-..++++..+.++|..++|++.+++.+
T Consensus 101 l~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~ 180 (498)
T COG3104 101 LMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAI 180 (498)
T ss_pred HHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHH
Confidence 9999999999984 7888999999999999999999999999999764 47888999999999999999999999999
Q ss_pred hcccCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhh---------Hhhhc--CCCcchhH----
Q 010744 191 HQFWGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDE---------LVEKG--NTSVSSVW---- 255 (502)
Q Consensus 191 ~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~--~~~~~~~~---- 255 (502)
. .||...|.+.++-..+..+..+...+.-......+++...+..... ..... .....+.+
T Consensus 181 ~-----~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 255 (498)
T COG3104 181 N-----YGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVL 255 (498)
T ss_pred h-----hCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8 9999999998776555555544443322111111111000000000 00000 00000000
Q ss_pred ------------HHhHHHHhhhcc-hhHHHHHHH---HHHhhhhhhhhH-HHHHHHHHH---h---CCChhhHHHHHHHH
Q 010744 256 ------------LESWMATKAVIK-VPTFQIIVL---QGIVGSLPWTAM-VFFTMWFEL---I---GFDHSSTAALLSLF 312 (502)
Q Consensus 256 ------------~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~---~---g~s~~~~~~~~~~~ 312 (502)
.+..+. ++... +++.+..+. .....+..+... +-+..|.++ + |++ ....+..+..
T Consensus 256 ~~~~i~~~~~~~~~~~~~-~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~-vp~~~fQslN 333 (498)
T COG3104 256 LVISILIAIIYFAEAFRS-PKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFE-VPPAWFQSLN 333 (498)
T ss_pred HHHHHHHHHHHHHHHhcc-CccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhccccccee-cCHHHHHhhC
Confidence 000000 00000 122222222 222222222222 334444432 2 222 3456677777
Q ss_pred Hhhhcccccchhhhhhhhcccc--CCcchhHHhhhhhhhhhhHHHHHhh----hccCCcchhHHHHHHHHHHHHHHhhhc
Q 010744 313 AIGCAVGSFLGGVVADRISQAY--PHSGRVMCAQFSAFMGIPFSWFLLT----AIPQSVSNYYTYAVTLVLMGLTISWNA 386 (502)
Q Consensus 313 ~~~~~~~~~~~g~l~d~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~~ 386 (502)
.+.-++..++..++..|.++++ +.. ..-....-.+++.....+... ..+....+.++.+...++.+++.-+..
T Consensus 334 p~~Iii~~pI~a~l~~~l~~~~~~ps~-~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iS 412 (498)
T COG3104 334 PFFIILFSPILAALWTKLGRGNKQPST-PIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFIS 412 (498)
T ss_pred HHHHHHHHHHHHHHHhHhhcCCCCCCc-chHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhC
Confidence 7777888888888888855443 221 111111111111111111111 111333445667788888999988887
Q ss_pred cCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHH
Q 010744 387 TAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVG 426 (502)
Q Consensus 387 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g 426 (502)
| +-.+++....|++..+..+++.......+..++..+.+
T Consensus 413 p-vGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 413 P-VGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred H-HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecc
Confidence 7 78899999999988888888776655555555444443
No 120
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.66 E-value=7.1e-16 Score=126.61 Aligned_cols=137 Identities=29% Similarity=0.455 Sum_probs=125.2
Q ss_pred HHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCC
Q 010744 82 TFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDG 161 (502)
Q Consensus 82 ~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 161 (502)
.+.+.++..+++++.|++.||+|||+.+..+..+..++.+...+.++++.+.+.+++.|++.+...+....++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 45567888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHHHhccC
Q 010744 162 VRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVLVFVVD 223 (502)
Q Consensus 162 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~ 223 (502)
+|+++.++.+....+|..+++.+.+.+.+. .+|++.+++.+.+.++..+..+++.||
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQF-----LGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhcc-----cchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999999877 899999999988888777777766654
No 121
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.65 E-value=1.9e-14 Score=139.08 Aligned_cols=365 Identities=15% Similarity=0.186 Sum_probs=237.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCC-CchHHHHHH----HHHHhhhcchhhhhhhhcCCchhHHHHHH
Q 010744 40 SLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPS-DLGYLTFIR----NFVQGLSSPLAGVLVINYDRPAVLTIGIL 114 (502)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~-~~g~~~s~~----~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 114 (502)
+.......+-.+..++.........+.....++.+.. ..+...... .+...+.++..|.++||+|||..+.+...
T Consensus 21 ~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~ 100 (463)
T KOG2816|consen 21 RHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLF 100 (463)
T ss_pred hHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHH
Confidence 3444455555555555555555566666665554332 233333333 67788899999999999999999999999
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHhhh--hhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhc
Q 010744 115 CWAFSTAAVGASQHFLHVGMWRAVNGFG--LAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQ 192 (502)
Q Consensus 115 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~--~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~ 192 (502)
...+..++..+.. |++++ +.|+. .+.......++++|....++|...+|+.......+..++|.+++.+...
T Consensus 101 ~~~l~~~~~~~~~--~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~- 174 (463)
T KOG2816|consen 101 GTILPALCLLFQG--YWFFL---LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKF- 174 (463)
T ss_pred HHHHhHHHHHHHH--HHHhh---hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh-
Confidence 9999888887766 33333 44443 2455678888999999999999999999999999999999999999988
Q ss_pred ccCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHH
Q 010744 193 FWGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQ 272 (502)
Q Consensus 193 ~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (502)
.|.-.+|.+..+..++..+..++..||+.....+.+.+..+....+ .......+..+.....-.+|..+
T Consensus 175 ----~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~r~~l 243 (463)
T KOG2816|consen 175 ----LGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGS-------LDSSHVADAFQSLTKVGPDRLLL 243 (463)
T ss_pred ----cCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCc-------ccchhhhhhhhhhcccCCCccch
Confidence 8999999999999999888888888876554333211110000000 00011112222222222334444
Q ss_pred HHHHHHHhhh-hhhhhHH-HHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchh-hhhhhhccccCCcchhHHhhhhhh
Q 010744 273 IIVLQGIVGS-LPWTAMV-FFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGG-VVADRISQAYPHSGRVMCAQFSAF 348 (502)
Q Consensus 273 ~~~~~~~~~~-~~~~~~~-~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g-~l~d~~g~~~~~~~~~~~~~~~~~ 348 (502)
.+....+... ....... ..+.|++. +|++..+.+.+.+.......++.++.. .+...++.|+. +.
T Consensus 244 ~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~-----------i~ 312 (463)
T KOG2816|consen 244 LLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRL-----------IS 312 (463)
T ss_pred HHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhH-----------hh
Confidence 4443333322 2222221 33556665 899999999998988888888887766 67777887762 22
Q ss_pred hhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHH
Q 010744 349 MGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGIL 428 (502)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l 428 (502)
+++..-.+....+......|..+ ......++ .....+ ...+......+++++|++.++...+..+.+.++|.+.+.+
T Consensus 313 lGl~~~~~~~~~~af~~~~w~~~-~~~v~~~~-~~~~~p-a~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i 389 (463)
T KOG2816|consen 313 LGLLSEFLQLLLFAFATETWMMF-AAGVVVAL-AGIVFP-AIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNI 389 (463)
T ss_pred HHHHHHHHHHHHHHHhccchhhh-HHHHHHHh-hcchhH-HHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHH
Confidence 22222222222222222222222 22222222 233333 5778888889999999999999999999999999999999
Q ss_pred HHHhcCC
Q 010744 429 SEKMFGY 435 (502)
Q Consensus 429 ~~~~~~~ 435 (502)
+..+..+
T Consensus 390 ~~~t~~~ 396 (463)
T KOG2816|consen 390 FALTLDD 396 (463)
T ss_pred HHHHHHh
Confidence 8876543
No 122
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.63 E-value=1.6e-14 Score=140.70 Aligned_cols=350 Identities=17% Similarity=0.180 Sum_probs=221.4
Q ss_pred hhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcC-----CchhHHHHHHHHHHHHHHHHhh----hHHHH
Q 010744 61 PSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYD-----RPAVLTIGILCWAFSTAAVGAS----QHFLH 131 (502)
Q Consensus 61 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G-----rr~~l~~~~~~~~~~~~~~~~~----~~~~~ 131 (502)
....|.+.+++|+++++...+.+...+...+ -++.|.++|.+- ||+-++++.++.+++.+..+.. .+...
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~ 88 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAI 88 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhh
Confidence 4567889999999999999998888887665 477899999863 5557777888876666666553 35666
Q ss_pred HHHHHHHHhhhhhhhhhhhHHHHhhccC--CCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHH
Q 010744 132 VGMWRAVNGFGLAIVIPALQSFIADSYK--DGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATL 209 (502)
Q Consensus 132 l~~~r~l~G~~~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~ 209 (502)
..+.-++..+|......++-+++.|... +++||...+.......+|.+++..++|.+.+. .++|+.|.+.+++
T Consensus 89 ~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~-----~~~~~~f~i~~~~ 163 (433)
T PF03092_consen 89 AVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDS-----FGPQGVFLISAAL 163 (433)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhc-----CCCeEEehHHHHH
Confidence 7777788999999999999999999983 34477888888889999999999999999887 8999999999888
Q ss_pred HHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHH-HHHhhhhhhhhH
Q 010744 210 SVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVL-QGIVGSLPWTAM 288 (502)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 288 (502)
..+..+..+++.||.+.....+ ......+ .........++..+..++.++.+..+...+ ..++........
T Consensus 164 ~~l~~~~~~~~~~e~~~~~~~~---~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 235 (433)
T PF03092_consen 164 PLLMLIVALFLLEERKVRPADE---VFSFGKE-----EVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSIS 235 (433)
T ss_pred HHHHHHHHHHhhhhccccccch---hhccccc-----ccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCC
Confidence 8888777777777622111110 0000000 000011113555566667777777776655 222222211111
Q ss_pred HHHHHHH--HHhC---CChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccC
Q 010744 289 VFFTMWF--ELIG---FDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQ 363 (502)
Q Consensus 289 ~~~~~~~--~~~g---~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (502)
.-...|. ...+ +++...+.+..+..++.++|..+......+..-|+. .... .++.......-+.....
T Consensus 236 ~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~------~~~t-~~~~~~~~l~~~~lv~~ 308 (433)
T PF03092_consen 236 SASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRI------FVVT-TLVSVLASLFDLLLVTR 308 (433)
T ss_pred CccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH------HHHH-HHHHHHHhcccEEEEEE
Confidence 0001112 1245 888887777766677777776666555554444432 1111 11111111110001000
Q ss_pred ------CcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhc
Q 010744 364 ------SVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMF 433 (502)
Q Consensus 364 ------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~ 433 (502)
.++.+..+ .--.+..+......- ....++.|+.|+...|+.+++..++.|+|..++..++..+.+..+
T Consensus 309 ~n~~~Gi~d~~f~l-gd~~l~~~~~~i~~m-P~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 309 WNLDLGIPDQWFAL-GDTILEEVIGMIAFM-PSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred EeeeeCcCCeEEEE-EhHHHHHHHHHHHHH-HHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 01111111 111222222222222 246778899999999999999999999999999999999988865
No 123
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.62 E-value=6.7e-15 Score=144.54 Aligned_cols=151 Identities=13% Similarity=0.255 Sum_probs=133.2
Q ss_pred hcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhh
Q 010744 70 AFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPA 149 (502)
Q Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 149 (502)
+.+.+..+.|++.++..++..++.+++|++.||+|+|+.+..+.++.+++.++.++++|.+.+++.+++.|++.+...+.
T Consensus 256 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~ 335 (420)
T PRK09528 256 TPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVG 335 (420)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 34566678899999999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred hHHHHhhccCCCCcchhhhH-HHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHHHhccCCc
Q 010744 150 LQSFIADSYKDGVRGAGFGL-LSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVLVFVVDPR 225 (502)
Q Consensus 150 ~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~ 225 (502)
...++.|.+|++.|+...+. ++....+|.++++.+.+++.+. .|||..|++.+++.++..++.++..++++
T Consensus 336 ~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~-----~G~~~~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 336 VFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDS-----IGFQGTYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred HHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHh-----hCchHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 88999999999999988766 6778889999999999999987 89999999998888777776666655543
No 124
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.62 E-value=1.9e-14 Score=140.63 Aligned_cols=166 Identities=14% Similarity=0.284 Sum_probs=138.2
Q ss_pred hhHHHHHhhcCCCC--------CCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhh----HH
Q 010744 62 SVYKEVSEAFNAGP--------SDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQ----HF 129 (502)
Q Consensus 62 ~~~~~i~~~~~~s~--------~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~ 129 (502)
...+...++.|.++ ++.+.+.++..++..++.++.|+++||+|+|+++..+.++.+++..+..... ++
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~ 308 (418)
T TIGR00889 229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGY 308 (418)
T ss_pred HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhH
Confidence 44455666666543 5679999999999999999999999999999999999999998877776632 34
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHH-HHHhhhhhHHHHHHHHHhhhcc-cCcccchHHHHHHH
Q 010744 130 LHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLS-LVGTMGGIGGGVLATIMAGHQF-WGVPGWRCAFILMA 207 (502)
Q Consensus 130 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~~~-~~~~~wr~~f~~~~ 207 (502)
+.+++.+++.|++.+...+....++.|++|+++|++++|+.+ ...++|.++||++++++.+..+ .+..||++.|++.+
T Consensus 309 ~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~ 388 (418)
T TIGR00889 309 ALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFA 388 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHH
Confidence 667788999999999988999999999999999999999997 6789999999999999988632 11147999999999
Q ss_pred HHHHHHHHHHHHhccCCccc
Q 010744 208 TLSVLIAFLVLVFVVDPRKK 227 (502)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~ 227 (502)
++.++.+++.+++.+|+...
T Consensus 389 ~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 389 GYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred HHHHHHHHHHHHHhCCcccC
Confidence 99888888888877766443
No 125
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.60 E-value=3.2e-14 Score=142.30 Aligned_cols=168 Identities=8% Similarity=-0.001 Sum_probs=127.1
Q ss_pred hhchhhHHHHH-hhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHH---HHhhhHHHHHH
Q 010744 58 NLLPSVYKEVS-EAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAA---VGASQHFLHVG 133 (502)
Q Consensus 58 ~~~~~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~---~~~~~~~~~l~ 133 (502)
.......|.+. +++|.+..+.++..+...++..++.++.|+++||+|||+++..+.++..++... ...+++...++
T Consensus 267 ~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (490)
T PRK10642 267 YMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIF 346 (490)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 33444556654 668988888888888889999999999999999999999988887654433322 22345677788
Q ss_pred HHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHH
Q 010744 134 MWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLI 213 (502)
Q Consensus 134 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~ 213 (502)
+++++.|++.+........++.|.+|++.|++++++......++..++|.+.+++.+.. .+|+.++++..+.+++.
T Consensus 347 ~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~----~~~~~~~~~~~~~~~i~ 422 (490)
T PRK10642 347 AGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVEST----QNLMMPAYYLMVVAVIG 422 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh----CCchHHHHHHHHHHHHH
Confidence 89999999887777778888999999999999999755545566778899888887641 35888887777777777
Q ss_pred HHHHHHhccCCccccC
Q 010744 214 AFLVLVFVVDPRKKAS 229 (502)
Q Consensus 214 ~~~~~~~~~~~~~~~~ 229 (502)
.+..++.+|+|++..+
T Consensus 423 ~~~~~~~pes~~~~~~ 438 (490)
T PRK10642 423 LITGVTMKETANRPLK 438 (490)
T ss_pred HHHHHHhccccCCCCC
Confidence 7766667666666443
No 126
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.58 E-value=1.2e-13 Score=134.76 Aligned_cols=157 Identities=18% Similarity=0.111 Sum_probs=135.1
Q ss_pred hhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 010744 62 SVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNGF 141 (502)
Q Consensus 62 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 141 (502)
..+|.+.++.|. .+.++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+++.+++.|+
T Consensus 237 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 314 (399)
T PRK05122 237 TFITLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGF 314 (399)
T ss_pred HHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 344555556665 456777788899999999999999999999999999999999998888888898888899999999
Q ss_pred hhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHHHhc
Q 010744 142 GLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVLVFV 221 (502)
Q Consensus 142 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 221 (502)
+.+...+.....+.|.+|+++|+++.++++....+|..+++.+.+.+.+. .||++.|++.+++.++..++.+++.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (399)
T PRK05122 315 GFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASW-----FGYPSIFLAAALAALLGLALTWLLY 389 (399)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99998888888888999999999999999999999999999999999887 8999999999888887777666665
Q ss_pred cCCc
Q 010744 222 VDPR 225 (502)
Q Consensus 222 ~~~~ 225 (502)
++++
T Consensus 390 ~~~~ 393 (399)
T PRK05122 390 RRAP 393 (399)
T ss_pred cccc
Confidence 5443
No 127
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.58 E-value=1.4e-13 Score=133.91 Aligned_cols=153 Identities=13% Similarity=0.075 Sum_probs=128.4
Q ss_pred hhHHH-HHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Q 010744 62 SVYKE-VSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNG 140 (502)
Q Consensus 62 ~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 140 (502)
...|. +.+++|.++.+.+++.+...+...++.++.|+++||+|||+.+..+.....+........++.+.+++.+++.+
T Consensus 237 ~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 316 (393)
T PRK15011 237 INMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNA 316 (393)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 34554 55778999999999988888888889999999999999999888877766666555566788888888999999
Q ss_pred hhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHHHh
Q 010744 141 FGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVLVF 220 (502)
Q Consensus 141 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 220 (502)
++.+...+....+..|.+| ++|+++.++++....+|..+++.+++.+.+. .+|+..|++.+++.++..++.++.
T Consensus 317 ~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~-----~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 317 IYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEI-----WNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHH-----hhhHHHHHHHHHHHHHHHHHHHhh
Confidence 9888877778888899986 5699999999999999999999999999987 799999998888777766666554
No 128
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.57 E-value=5.6e-13 Score=121.22 Aligned_cols=263 Identities=16% Similarity=0.142 Sum_probs=171.6
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHH
Q 010744 38 GISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWA 117 (502)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 117 (502)
.++.-+.+-.++...+. ..+|..-.+-+++|.+..|++.+........++..++.|.++||+|||+..+.-.++++
T Consensus 35 Fqr~yl~vY~La~~aDW----LQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~ 110 (354)
T PF05631_consen 35 FQRKYLLVYLLAMAADW----LQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYS 110 (354)
T ss_pred HHHHHHHHHHHHHHHHH----hhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Confidence 34444444444444443 33444444557899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHH-hhccC----CCCcchhhhHHH-HHHhhhhhHHHHHHHHHhhh
Q 010744 118 FSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFI-ADSYK----DGVRGAGFGLLS-LVGTMGGIGGGVLATIMAGH 191 (502)
Q Consensus 118 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i-~~~~~----~~~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~ 191 (502)
++++ +-..++++.++++|++.|++.+....+-.+++ .|.-. ++..+.-++... ..+++-.+++.+++.++.+.
T Consensus 111 ~scl-~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~ 189 (354)
T PF05631_consen 111 LSCL-TKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADW 189 (354)
T ss_pred HHHH-HHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHH
Confidence 9986 44568999999999999999999999888875 45432 222223233222 23344455566666666654
Q ss_pred cccCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHH
Q 010744 192 QFWGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTF 271 (502)
Q Consensus 192 ~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (502)
. ..|-..+|....++..+..++....-+|......+. ....++..+..+.+.++|++
T Consensus 190 ~---~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~--------------------~~~~~~~~~a~~~i~~d~ri 246 (354)
T PF05631_consen 190 F---GFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSS--------------------SSLSGSFREAWRAILSDPRI 246 (354)
T ss_pred h---CCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccc--------------------cchHHHHHHHHHHHHcCchh
Confidence 1 123378888887777776666655444432221111 01112334455667777887
Q ss_pred HHHHHHHHhhhhhhhhH--HHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhh
Q 010744 272 QIIVLQGIVGSLPWTAM--VFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRI 330 (502)
Q Consensus 272 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 330 (502)
+.+.+.-.+.-.....+ .|.|..-.+ + ...--|++++.+.++.++|+.+..++..+-
T Consensus 247 l~LG~~qslFE~smy~FVflWtPaL~~~-~-~~~P~GlIFssFM~a~MlGS~lf~~l~s~~ 305 (354)
T PF05631_consen 247 LLLGLIQSLFEGSMYLFVFLWTPALDPD-D-EELPLGLIFSSFMVAMMLGSSLFSRLLSKS 305 (354)
T ss_pred HHHHHHHHHHHHHHHHheeeeeceecCC-C-CCCCchHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 77666555544433333 456665421 1 123468899999999999988887665543
No 129
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.56 E-value=9e-14 Score=136.12 Aligned_cols=160 Identities=20% Similarity=0.158 Sum_probs=134.4
Q ss_pred chhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 010744 60 LPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVN 139 (502)
Q Consensus 60 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 139 (502)
.....|.+.++.|.+..+.+.+.+.+.++..++.++.|++.||+|||+.+..+.+..+++.++..+.++.+.+.+..++.
T Consensus 239 ~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (406)
T PRK11551 239 LLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAA 318 (406)
T ss_pred HHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 33456778888999999999999999999999999999999999999999888777777777777778888888888899
Q ss_pred hhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHHH
Q 010744 140 GFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVLV 219 (502)
Q Consensus 140 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~ 219 (502)
|++.+...+...+++.|.+|+++|+++.|+.+....+|..+||.+++.+.+.. .+|...+++.....++..+..++
T Consensus 319 g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 319 GLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALG----RSTVGVIGASIPVILVAALAALL 394 (406)
T ss_pred HHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccC----CchHHHHHHHHHHHHHHHHHHHH
Confidence 99888888889999999999999999999999999999999999999998751 35666666666665555555555
Q ss_pred hccC
Q 010744 220 FVVD 223 (502)
Q Consensus 220 ~~~~ 223 (502)
..++
T Consensus 395 ~~~~ 398 (406)
T PRK11551 395 LVSR 398 (406)
T ss_pred Hhcc
Confidence 5443
No 130
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.56 E-value=1e-13 Score=141.89 Aligned_cols=138 Identities=14% Similarity=0.121 Sum_probs=121.1
Q ss_pred HHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCC
Q 010744 81 LTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKD 160 (502)
Q Consensus 81 ~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 160 (502)
...+..++..++.++.|+++||+|||++++++.++.+++.++.+++++...+++.+++.|++.+..++...++++|++|.
T Consensus 600 ~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt 679 (742)
T TIGR01299 600 VNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPS 679 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH
Confidence 35566788899999999999999999999999999999999999999888888899999998888999999999999999
Q ss_pred CCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHHHhccCCc
Q 010744 161 GVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVLVFVVDPR 225 (502)
Q Consensus 161 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~ 225 (502)
++|++++|+......+|.++||++++.+.+. +...+|++.+++.++.+++.+++ ||++
T Consensus 680 ~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~------~~~~pf~i~a~~lll~~ll~~~L-PET~ 737 (742)
T TIGR01299 680 DKRATAFGFLNALCKAAAVLGILIFGSFVGI------TKAAPILFASAALACGGLLALKL-PDTR 737 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------hhHHHHHHHHHHHHHHHHHHHhC-CCCc
Confidence 9999999999999999999999999988764 45678888887777766666655 4443
No 131
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.55 E-value=4.9e-14 Score=136.47 Aligned_cols=148 Identities=20% Similarity=0.230 Sum_probs=128.8
Q ss_pred hhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHH--HHHHHHHHH
Q 010744 61 PSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHF--LHVGMWRAV 138 (502)
Q Consensus 61 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l 138 (502)
....+.+.++++.+..+.+++.+.+.++..++.++.|++.||+|||+.+.++.++.+++.++..+.++. ..++...++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (377)
T TIGR00890 225 IGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVAL 304 (377)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHH
Confidence 344556678899888889999999999999999999999999999999999999999988887776643 334566788
Q ss_pred HhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHH
Q 010744 139 NGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLI 213 (502)
Q Consensus 139 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~ 213 (502)
.|++.+...+..+.++.|.+|+++|+++.|+.+....+|..++|.+.+.+.+. .||++.|++.+++.++.
T Consensus 305 ~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~-----~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 305 VFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTE-----IGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhh-----hchhhHHHHHHHHHHHh
Confidence 89988888888888999999999999999999999999999999999999887 89999999988776554
No 132
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.55 E-value=2.1e-13 Score=133.95 Aligned_cols=162 Identities=15% Similarity=0.150 Sum_probs=142.0
Q ss_pred chhhHHHHHhh-cCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 010744 60 LPSVYKEVSEA-FNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAV 138 (502)
Q Consensus 60 ~~~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 138 (502)
.....|.+.++ +|.+..+.|++.+.+.++..++.++.+++.||.++++.+..+..+.+++.++..+.++.+.+.++.++
T Consensus 242 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLAL 321 (417)
T ss_pred HHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 34456666666 89999999999999999999999999999999888888999888888888888888998888889999
Q ss_pred HhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHH
Q 010744 139 NGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVL 218 (502)
Q Consensus 139 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~ 218 (502)
.|++.+...+...+++.|..|+++|+++++++.....+|..+|+.+.+.+.+. .|++..+++.+...++..++.+
T Consensus 322 ~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~-----~g~~~~~~~~~~~~~~~~~~~~ 396 (417)
T PRK10489 322 FGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAM-----MTPVASASASGFGLLIIGVLLL 396 (417)
T ss_pred HHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHH-----hchhhHHHHHHHHHHHHHHHHH
Confidence 99998888888889999999999999999999999999999999999999987 8999999998888777777776
Q ss_pred HhccCCcc
Q 010744 219 VFVVDPRK 226 (502)
Q Consensus 219 ~~~~~~~~ 226 (502)
...++.+.
T Consensus 397 ~~~~~~~~ 404 (417)
T PRK10489 397 LVLGELRR 404 (417)
T ss_pred Hhcccccc
Confidence 66665444
No 133
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.55 E-value=1.5e-13 Score=134.69 Aligned_cols=160 Identities=16% Similarity=0.246 Sum_probs=134.4
Q ss_pred hchhhHHHHHhhcCCCCCC----chHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 010744 59 LLPSVYKEVSEAFNAGPSD----LGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGM 134 (502)
Q Consensus 59 ~~~~~~~~i~~~~~~s~~~----~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (502)
...+..+.+.++.+.+..+ .+.+.+++.++..++.++.|++.||+|||+.+..+..+..++.+...+.++.+.+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (408)
T PRK09874 237 SIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGI 316 (408)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 3444555555554433333 455666777888899999999999999999999999988888888888888898999
Q ss_pred HHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHH
Q 010744 135 WRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIA 214 (502)
Q Consensus 135 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~ 214 (502)
.+++.|++.+...+...+++.+..|+++|++.+++.+....+|..+||.+++.+.+. .||++.|++.+++.++..
T Consensus 317 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~-----~g~~~~f~~~~~~~l~~~ 391 (408)
T PRK09874 317 LRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISAN-----YGFRAVFLVTAGVVLFNA 391 (408)
T ss_pred HHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhh-----cchhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999887 899999999998888877
Q ss_pred HHHHHhccC
Q 010744 215 FLVLVFVVD 223 (502)
Q Consensus 215 ~~~~~~~~~ 223 (502)
+..++..++
T Consensus 392 ~~~~~~~~~ 400 (408)
T PRK09874 392 VYSWNSLRR 400 (408)
T ss_pred HHHHHHHHH
Confidence 776654443
No 134
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.52 E-value=1.9e-13 Score=130.91 Aligned_cols=162 Identities=23% Similarity=0.333 Sum_probs=145.1
Q ss_pred HHHhhhhchhhHHHHHhhc-CCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCch-hHHHHHHHHHHHHHHHHhhhHHH
Q 010744 53 ERADENLLPSVYKEVSEAF-NAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPA-VLTIGILCWAFSTAAVGASQHFL 130 (502)
Q Consensus 53 ~~~~~~~~~~~~~~i~~~~-~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~-~l~~~~~~~~~~~~~~~~~~~~~ 130 (502)
............|.+.++. |.+..+.++..+...++..++.++.|++.||+|||+ .+..+..+..++.++..+.++.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 266 (352)
T cd06174 187 LSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLA 266 (352)
T ss_pred HHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHH
Confidence 3333444455566666664 889999999999999999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHH
Q 010744 131 HVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLS 210 (502)
Q Consensus 131 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~ 210 (502)
.+.+..++.|++.+...+....++.|..|+++|++.+++.+....+|..+++.+.+.+.+. .+|++.+++.+++.
T Consensus 267 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~-----~~~~~~~~~~~~~~ 341 (352)
T cd06174 267 LLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDT-----GGYGGVFLILAALA 341 (352)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----cCcchHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999976 89999999999888
Q ss_pred HHHHHHHHH
Q 010744 211 VLIAFLVLV 219 (502)
Q Consensus 211 ~~~~~~~~~ 219 (502)
++..+..++
T Consensus 342 ~i~~i~~~~ 350 (352)
T cd06174 342 LLAALLLLL 350 (352)
T ss_pred HHHHHHhee
Confidence 877766543
No 135
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.52 E-value=5.9e-13 Score=128.97 Aligned_cols=154 Identities=17% Similarity=0.053 Sum_probs=135.5
Q ss_pred hhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 010744 56 DENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMW 135 (502)
Q Consensus 56 ~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 135 (502)
.........|.+.+|+|.+..++|++.+...++..+..++.+++.||+|+|+.+.++.+..++..++.++++|.+.+++.
T Consensus 220 ~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (382)
T TIGR00902 220 AHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLL 299 (382)
T ss_pred HHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHH
Confidence 33344445566667899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHH-HHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHH
Q 010744 136 RAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLS-LVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIA 214 (502)
Q Consensus 136 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~ 214 (502)
+++.|+..+...+....++.+. |+++|++..++++ ...++|.++|+.++|++.++ .|+ ..|++.+.+.++..
T Consensus 300 q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~-----~g~-~~~~~~~~~~~~~~ 372 (382)
T TIGR00902 300 QILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPT-----LGA-GTFVFMAIIAAAAF 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccH-HHHHHHHHHHHHHH
Confidence 9999999999999999999998 9999999999986 57889999999999999998 786 66777777776544
Q ss_pred HH
Q 010744 215 FL 216 (502)
Q Consensus 215 ~~ 216 (502)
++
T Consensus 373 ~~ 374 (382)
T TIGR00902 373 FL 374 (382)
T ss_pred HH
Confidence 33
No 136
>PRK12382 putative transporter; Provisional
Probab=99.51 E-value=6.6e-13 Score=129.29 Aligned_cols=154 Identities=16% Similarity=0.103 Sum_probs=132.9
Q ss_pred hhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Q 010744 61 PSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNG 140 (502)
Q Consensus 61 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 140 (502)
....|.+.++.+.+ +.++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+++..++.|
T Consensus 236 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 313 (392)
T PRK12382 236 GTFVSLYFASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTG 313 (392)
T ss_pred HHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 34445555666654 4566777788888999999999999999999999999999999888888888888888999999
Q ss_pred hhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHHHh
Q 010744 141 FGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVLVF 220 (502)
Q Consensus 141 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 220 (502)
++.+...+...+.+.|.+|+++|+++.|+.+....+|..++|.+.+.+.++ .||++.|.+.+.+.++..++.++.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 314 AGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATS-----FGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCchHHHHHHHHHHHHHHHHHHhh
Confidence 999988888888999999999999999999999999999999999999988 899999999998877776666554
Q ss_pred c
Q 010744 221 V 221 (502)
Q Consensus 221 ~ 221 (502)
.
T Consensus 389 ~ 389 (392)
T PRK12382 389 F 389 (392)
T ss_pred c
Confidence 3
No 137
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.50 E-value=9.9e-13 Score=127.33 Aligned_cols=148 Identities=15% Similarity=0.167 Sum_probs=127.4
Q ss_pred HHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhh
Q 010744 66 EVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNGFGLAI 145 (502)
Q Consensus 66 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 145 (502)
.+.+++|.++.+.+++.+.......++.++.|++.||+|||+++.++.++..+......+.++.+.+++.+++.|++.+.
T Consensus 225 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 304 (375)
T TIGR00899 225 LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGI 304 (375)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44578899999999998888878888899999999999999999888887777666666778888888899999999998
Q ss_pred hhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHHH
Q 010744 146 VIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVLV 219 (502)
Q Consensus 146 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~ 219 (502)
..+....++.|..|+ +++++.++++....+|..++|.+++.+.+. .||+..|++.+++.++..++..+
T Consensus 305 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 305 LAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAER-----WSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccchhHHHHHHHHHHHHHHHHhe
Confidence 888888999998864 667999999999999999999999999987 89999999988877666665544
No 138
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.49 E-value=3.7e-13 Score=135.41 Aligned_cols=151 Identities=15% Similarity=0.178 Sum_probs=119.4
Q ss_pred chhhHHHHH-hhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhh--hHHHHHHHHH
Q 010744 60 LPSVYKEVS-EAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGAS--QHFLHVGMWR 136 (502)
Q Consensus 60 ~~~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r 136 (502)
....+|.+. +++|.+..+.+++.+.+.++..++.++.|+++||+|||+++..+.++.++..++.... .+.+.+.+..
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLL 373 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 345567766 5899999999999999999999999999999999999999988887777665544332 3444444555
Q ss_pred HHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHH
Q 010744 137 AVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAF 215 (502)
Q Consensus 137 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~ 215 (502)
++.+....+..+..+.++.|.+|+++|++++++......+|..+||.+++.+.+. .||+..+...+....+..+
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~-----~g~~~~~~~~~~~~~~~~~ 447 (496)
T PRK03893 374 FFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQR-----LDLGTALASLSFSLTFVVI 447 (496)
T ss_pred HHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhcc-----CChHHHHHHHHHHHHHHHH
Confidence 5555444445567778899999999999999999999999999999999999987 8999888766554444333
No 139
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.49 E-value=1.2e-12 Score=126.76 Aligned_cols=151 Identities=14% Similarity=0.098 Sum_probs=126.6
Q ss_pred hhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 010744 62 SVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNGF 141 (502)
Q Consensus 62 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 141 (502)
..+|.+.++.|.+.++.+++.+.+.++..+++++.|++.||+|+|+++..+..+.+++.+... + ........++.|+
T Consensus 221 ~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~ 297 (381)
T PRK03633 221 GLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILGA 297 (381)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHHH
Confidence 346777778899999999999999999999999999999999999999988888877765443 2 2334456788888
Q ss_pred hhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHHHh
Q 010744 142 GLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVLVF 220 (502)
Q Consensus 142 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 220 (502)
+.....|...+.+.|..|+++++.+.+.+....++|..+||.+++++.++ .+|++.|.+.+.+.++..+..++.
T Consensus 298 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~-----~g~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 298 AGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQN-----YSDNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCccHHHHHHHHHHHHHHHHHHhc
Confidence 87778899999999999888888888898899999999999999999988 899999999888776665554443
No 140
>PRK03545 putative arabinose transporter; Provisional
Probab=99.47 E-value=3e-12 Score=124.53 Aligned_cols=155 Identities=14% Similarity=0.039 Sum_probs=127.8
Q ss_pred hhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHH-HHHHhhhHHHHHHHHHHHHh
Q 010744 62 SVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFST-AAVGASQHFLHVGMWRAVNG 140 (502)
Q Consensus 62 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G 140 (502)
...|.+.+++|.+..+.+++.+...++..+++++.|++.||+|||+... +..+..++. .+....++.+.+++..++.|
T Consensus 227 ~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g 305 (390)
T PRK03545 227 YIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFWG 305 (390)
T ss_pred HHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 3445566668999999999999999999999999999999999887544 444444443 33455678888888999999
Q ss_pred hhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHHHh
Q 010744 141 FGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVLVF 220 (502)
Q Consensus 141 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 220 (502)
++.+...+...+.+.+..| ++|++++|+++....+|..+||++++.+.++ .|++..|++.+.+.++..+..+..
T Consensus 306 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 306 IAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLH-----LGLSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred HHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cChhHHHHHHHHHHHHHHHHHHHH
Confidence 9988777878888888875 6899999999999999999999999999988 899999999998888777777766
Q ss_pred ccC
Q 010744 221 VVD 223 (502)
Q Consensus 221 ~~~ 223 (502)
.+.
T Consensus 380 ~~~ 382 (390)
T PRK03545 380 FRR 382 (390)
T ss_pred ccc
Confidence 543
No 141
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.46 E-value=1.3e-12 Score=130.87 Aligned_cols=180 Identities=16% Similarity=0.104 Sum_probs=138.3
Q ss_pred HHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHH
Q 010744 41 LSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFST 120 (502)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 120 (502)
..+....+..+.............|.+.+++|.+..+.++......++..++.++.|+++||+|||+.+.++.++.+++.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 363 (481)
T TIGR00879 284 RLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICL 363 (481)
T ss_pred HHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 33444444444444444455566788889999999888999999999999999999999999999999999988888887
Q ss_pred HHHHhh-----h------HHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHh
Q 010744 121 AAVGAS-----Q------HFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMA 189 (502)
Q Consensus 121 ~~~~~~-----~------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~ 189 (502)
++.++. + +...+....++.+.......+....++.|.+|+++|++++++......+|.++++.+.+.+.
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~ 443 (481)
T TIGR00879 364 FVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTML 443 (481)
T ss_pred HHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776621 1 33333333333333333344666777899999999999999999999999999999999998
Q ss_pred hhcccCcccchHHHHHHHHHHHHHHHHHHHhccCCc
Q 010744 190 GHQFWGVPGWRCAFILMATLSVLIAFLVLVFVVDPR 225 (502)
Q Consensus 190 ~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~ 225 (502)
+. .+|++.|++.++++++.+++.+++.||++
T Consensus 444 ~~-----~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 444 ES-----IGVGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred Hh-----cCccceehhHHHHHHHHHHHHheecccCC
Confidence 87 79999999999888888887776666544
No 142
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.46 E-value=1.9e-11 Score=114.57 Aligned_cols=344 Identities=11% Similarity=0.072 Sum_probs=221.1
Q ss_pred hhhHHHHHhh-cCCCCCCch-HHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 010744 61 PSVYKEVSEA-FNAGPSDLG-YLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAV 138 (502)
Q Consensus 61 ~~~~~~i~~~-~~~s~~~~g-~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 138 (502)
+.+.|.+.+. .|++..|+. -+.-...-.+....++...+.|..+.|++++++.+...+...+.-+.++...+-+..++
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~ 103 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFF 103 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHH
Confidence 4456666665 788877764 45566667777888899999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHH
Q 010744 139 NGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVL 218 (502)
Q Consensus 139 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~ 218 (502)
-|++.+. ..+-++++-...|+++-.++.+...+..-+|..++.++|-.+... +..+.+....+......+..++.+
T Consensus 104 yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~---~~~sy~~L~~isl~~~~~a~~~~~ 179 (412)
T PF01770_consen 104 YGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSF---GGVSYFQLNYISLASVSLALLIAL 179 (412)
T ss_pred HHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9998665 677889999999999999999999999999999999999988875 235666666666555555555555
Q ss_pred HhccCCcccc--CCCCC-------CCCCCchhhHh----hh----cCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhh
Q 010744 219 VFVVDPRKKA--STFHG-------TGENFDRDELV----EK----GNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVG 281 (502)
Q Consensus 219 ~~~~~~~~~~--~~~~~-------~~~~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (502)
++|+.++... ++..+ +.++.+..... .+ .........+..++..++..++|.++...+...+.
T Consensus 180 fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~a 259 (412)
T PF01770_consen 180 FLPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFA 259 (412)
T ss_pred HcCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Confidence 5554433211 11100 00000000000 00 01111223345667777888899988888887777
Q ss_pred hhhhhhH-HHHHHHHHHh---CCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHH
Q 010744 282 SLPWTAM-VFFTMWFELI---GFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFL 357 (502)
Q Consensus 282 ~~~~~~~-~~~~~~~~~~---g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (502)
...+... +|....-++. +-...-.|.+-+...+.+.++.+..|++-.+..+... +.+...+.+. . .+
T Consensus 260 tcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~----l~l~~~S~l~----a-~~ 330 (412)
T PF01770_consen 260 TCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGE----LALGVFSLLQ----A-GL 330 (412)
T ss_pred HhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHH----HHHHHHHHHH----H-HH
Confidence 6666555 5544444443 3333445777777778888888888887444443221 1222222111 1 11
Q ss_pred hhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhh
Q 010744 358 LTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSS 419 (502)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~ 419 (502)
++...... ..+...+..++++.......+ +...-++.....+.-|...|+..++.-+...
T Consensus 331 L~lm~~t~-~Iwv~Y~~yIif~~~y~fliT-iA~~qIA~~l~~e~yaLVFGiNtf~Al~LQt 390 (412)
T PF01770_consen 331 LFLMSFTG-NIWVCYAGYIIFRSLYMFLIT-IASFQIAKNLSEERYALVFGINTFVALVLQT 390 (412)
T ss_pred HHHHHHhh-HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccccceeeeeeeHHHHHHHHHH
Confidence 12222233 345566666666666655555 4455555555567777777777665544333
No 143
>PRK03699 putative transporter; Provisional
Probab=99.45 E-value=2.3e-12 Score=125.42 Aligned_cols=167 Identities=14% Similarity=0.062 Sum_probs=135.6
Q ss_pred HHHHHHHhhhhchhhHHHHH-hhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhh
Q 010744 49 AAIMERADENLLPSVYKEVS-EAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQ 127 (502)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 127 (502)
..++.......+....|.+. +++|.+..+.+++.+.+.++..++.++.|+++||++||+.+.....+.++...+....+
T Consensus 213 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~ 292 (394)
T PRK03699 213 AALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTD 292 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcC
Confidence 33333333333444566555 67899999999999999999999999999999999999999988888877777777777
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHH
Q 010744 128 HFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMA 207 (502)
Q Consensus 128 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~ 207 (502)
+.+.+.+..++.|++.+...+...++..+..| +++++..+.......+|..++|.+.+++.+. .||+..+++.+
T Consensus 293 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~-----~g~~~~~~~~~ 366 (394)
T PRK03699 293 DPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAH-----FGLQAALLTAN 366 (394)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHH-----hCchhhhhhhH
Confidence 88777778889999888888888888888774 5577888999999999999999999999987 89999999988
Q ss_pred HHHHHHHHHHHHhc
Q 010744 208 TLSVLIAFLVLVFV 221 (502)
Q Consensus 208 ~~~~~~~~~~~~~~ 221 (502)
++.++..+.....+
T Consensus 367 ~~~~~~~~~~~~~~ 380 (394)
T PRK03699 367 GLYAVVFVMCILLG 380 (394)
T ss_pred HHHHHHHHHHHHHH
Confidence 88777766555444
No 144
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.44 E-value=2.4e-13 Score=134.49 Aligned_cols=162 Identities=12% Similarity=0.109 Sum_probs=131.1
Q ss_pred HHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhc--CCchhHH--HHHHHHHHHHHHHH
Q 010744 49 AAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINY--DRPAVLT--IGILCWAFSTAAVG 124 (502)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~--Grr~~l~--~~~~~~~~~~~~~~ 124 (502)
..++...........+|.+.+++|.+..+.+++.++..++..+++++.|+++||. ++|+... .+.++.+++.++..
T Consensus 249 ~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~ 328 (455)
T TIGR00892 249 GNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCA 328 (455)
T ss_pred HHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3343444434444556777788999999999999999999999999999999984 3444333 34444455566667
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcc-cchHHH
Q 010744 125 ASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVP-GWRCAF 203 (502)
Q Consensus 125 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~-~wr~~f 203 (502)
..++++.+++.+++.|++.+...+...+++.|.+|++++++.+++++....+|..+||.+++.+.+. . +|++.|
T Consensus 329 ~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~-----~g~~~~~f 403 (455)
T TIGR00892 329 LAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDA-----TKNYKYIF 403 (455)
T ss_pred HhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehh-----cCCcchHH
Confidence 7889999999999999999999999999999999999999999999999999999999999999876 4 699999
Q ss_pred HHHHHHHHHHHH
Q 010744 204 ILMATLSVLIAF 215 (502)
Q Consensus 204 ~~~~~~~~~~~~ 215 (502)
++.+++.++..+
T Consensus 404 ~~~~~~~li~~~ 415 (455)
T TIGR00892 404 YASGSIVVSAGL 415 (455)
T ss_pred HHhhHHHHHHHH
Confidence 998877665544
No 145
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.44 E-value=1.8e-12 Score=129.04 Aligned_cols=177 Identities=12% Similarity=-0.025 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHHHhhhhchhhHHH-HHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHH
Q 010744 43 LILINLAAIMERADENLLPSVYKE-VSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTA 121 (502)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~ 121 (502)
+..+++..++............|. +.+++|.+..+.++..+...++..++.+++|+++||+|||+.+.....+..++..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~ 339 (467)
T PRK09556 260 IWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFT 339 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHH
Confidence 344444555544444444555665 4567999999999999999999999999999999999999987665544444332
Q ss_pred H--HHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhh-hhhHHHHHHHHHhhh-cc----
Q 010744 122 A--VGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTM-GGIGGGVLATIMAGH-QF---- 193 (502)
Q Consensus 122 ~--~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~g~~~~~~l~~~-~~---- 193 (502)
+ ....++.+.+.+.+++.|++.............|.+|+++||++.|+.+....+ |..++|.+.|++.+. ..
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~ 419 (467)
T PRK09556 340 LGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPI 419 (467)
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccccc
Confidence 2 233456666777888888654433333346677999999999999999988886 779999999999881 00
Q ss_pred --cCcccchHHHHHHHHHHHHHHHHHHH
Q 010744 194 --WGVPGWRCAFILMATLSVLIAFLVLV 219 (502)
Q Consensus 194 --~~~~~wr~~f~~~~~~~~~~~~~~~~ 219 (502)
....+|+..|++.++..++..+..++
T Consensus 420 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 420 FGYTLTGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred ccccccChHHHHHHHHHHHHHHHHHHHH
Confidence 01268999999987776665554443
No 146
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.43 E-value=2.7e-10 Score=108.97 Aligned_cols=371 Identities=12% Similarity=0.070 Sum_probs=219.0
Q ss_pred HHHHHHHHHHHHHhhhhchhhHHHHHhhcCCC-CCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHH
Q 010744 43 LILINLAAIMERADENLLPSVYKEVSEAFNAG-PSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTA 121 (502)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s-~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~ 121 (502)
...++..+++...+.-+.....|.+..+...+ ---.+...-.-.+..++.++..|.+.||..|++++..+++..-++..
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~ 83 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVA 83 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHH
Confidence 45567788888888888888888888877532 22233334444566778889999999999999998887766544433
Q ss_pred HHHhh--------h-------HHHHHHHHHHHHhhhhhhhh-hhhHHHHhhcc------CCCCcchhhhHHHHHHhhhhh
Q 010744 122 AVGAS--------Q-------HFLHVGMWRAVNGFGLAIVI-PALQSFIADSY------KDGVRGAGFGLLSLVGTMGGI 179 (502)
Q Consensus 122 ~~~~~--------~-------~~~~l~~~r~l~G~~~~~~~-~~~~~~i~~~~------~~~~r~~~~~~~~~~~~~G~~ 179 (502)
+.+.. + -...+++.-.+.|.-..... ....+.=.||. +++++.+.++...-.--+..+
T Consensus 84 ~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckl 163 (432)
T PF06963_consen 84 ASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKL 163 (432)
T ss_pred HHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHH
Confidence 32221 1 11122222222222222222 12222234664 345566777777777888999
Q ss_pred HHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHHHhc----cCCccccCCCCCCCCCCchhhHhhhcCCCcc---
Q 010744 180 GGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVLVFV----VDPRKKASTFHGTGENFDRDELVEKGNTSVS--- 252 (502)
Q Consensus 180 ~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 252 (502)
++|++.|.+.+. .+.+....+.++..++..++-+++. +..|....++++++.+...++....+.....
T Consensus 164 laPl~vG~l~t~-----~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (432)
T PF06963_consen 164 LAPLFVGLLMTF-----ASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSIL 238 (432)
T ss_pred HHHHHHHHHhhc-----cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccccccccccccccchhhHH
Confidence 999999999887 7888888888888777776555433 2222222222111111111111011111111
Q ss_pred ----hhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhhhhHHHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhh
Q 010744 253 ----SVWLESWMATKAVIKVPTFQIIVLQGIVGSLPWTAMVFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVAD 328 (502)
Q Consensus 253 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d 328 (502)
...++..+.++..++.+.+...+...+++....+.-..+..|+...|+++...|.+-....+.++.+.++..++.+
T Consensus 239 ~~~~~~~~~~~~~w~~Y~~q~vflas~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ 318 (432)
T PF06963_consen 239 KRLWNPLRTIIRGWRTYFRQPVFLASFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMK 318 (432)
T ss_pred HHHHHHHHHHhccHHHHHhCHHHHHHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122333445567777877776666666555444446678888889999999999999999999999999999999
Q ss_pred hhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCC--cchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhH
Q 010744 329 RISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQS--VSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMI 406 (502)
Q Consensus 329 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~ 406 (502)
|+|..|.- ++.... -..++..+...++..... ......+.....+.=+|.=..-. ....+++|.+|+++||+.
T Consensus 319 riGlvr~G---~~~l~~-q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL-~~~qi~Qe~V~~~~Rg~v 393 (432)
T PF06963_consen 319 RIGLVRAG---LWSLWW-QWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDL-AVTQIMQENVPESERGAV 393 (432)
T ss_pred HhcchhhH---HHHHHH-HHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhH-HHHHhhcccCCHHHhhHH
Confidence 99987642 222111 112222222222222211 11122222222222233222222 467788999999999999
Q ss_pred HHHHHHhhhhhhhhhHH
Q 010744 407 YAFDRAFEGSFSSFAAP 423 (502)
Q Consensus 407 ~g~~~~~~~~~~~~~~~ 423 (502)
+|+.+...++...+.-.
T Consensus 394 ~gvq~sl~~lf~ll~~~ 410 (432)
T PF06963_consen 394 SGVQNSLQSLFELLSFV 410 (432)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999998876654433
No 147
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.42 E-value=7.3e-12 Score=122.21 Aligned_cols=164 Identities=15% Similarity=0.094 Sum_probs=127.1
Q ss_pred HHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHH-HHHHHHHHHHHHHHh---
Q 010744 50 AIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLT-IGILCWAFSTAAVGA--- 125 (502)
Q Consensus 50 ~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~-~~~~~~~~~~~~~~~--- 125 (502)
.++............|.+.+++|.+..+.+++.+...++..++.++.|+++||+|||+.+. .+.+..+++.+...+
T Consensus 231 ~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~ 310 (402)
T TIGR00897 231 RIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQ 310 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333334444455678888889999999999999999999999999999999999998764 333444444333332
Q ss_pred --hhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHH
Q 010744 126 --SQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAF 203 (502)
Q Consensus 126 --~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f 203 (502)
.++.+.+++..++.|++.+...+. ...+.|.. |++|++++|+.+....+|..++|.+++.+.+. .||+..+
T Consensus 311 ~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~-----~g~~~~~ 383 (402)
T TIGR00897 311 HFGHSFAVALIIAIALGIFLAGYVPL-AAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGF-----FGAIGVV 383 (402)
T ss_pred ccCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----cchHHHH
Confidence 245677778889999988876554 45667765 56899999999999999999999999999987 8999999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 010744 204 ILMATLSVLIAFLVLVF 220 (502)
Q Consensus 204 ~~~~~~~~~~~~~~~~~ 220 (502)
++.+++.++..++.++.
T Consensus 384 ~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 384 WIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99998877777666553
No 148
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.42 E-value=2.5e-12 Score=125.33 Aligned_cols=157 Identities=17% Similarity=0.169 Sum_probs=121.8
Q ss_pred HHHHHHhhhhchhhHHHHH-hhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHH--HHHHh-
Q 010744 50 AIMERADENLLPSVYKEVS-EAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFST--AAVGA- 125 (502)
Q Consensus 50 ~~~~~~~~~~~~~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~--~~~~~- 125 (502)
.++............|.+. +++|.+..+.+++.+...++..++.++.|+++||+|||+.+.....+..+.. +...+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 307 (394)
T TIGR00883 228 VIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALL 307 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333333444445556655 7789999999999999999999999999999999999998775555444333 22222
Q ss_pred -hhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHH-HHHHhhhhhHHHHHHHHHhhhcccCccc-chHH
Q 010744 126 -SQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLL-SLVGTMGGIGGGVLATIMAGHQFWGVPG-WRCA 202 (502)
Q Consensus 126 -~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~G~~~g~~~~~~l~~~~~~~~~~-wr~~ 202 (502)
.++.+.++...++.|++.+...+...+++.|.+|+++|+++.++. +....+|..++|.+++++.++ .| |++.
T Consensus 308 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~-----~g~~~~~ 382 (394)
T TIGR00883 308 DSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAM-----TGDWYAI 382 (394)
T ss_pred cCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHH-----cCcchhH
Confidence 246677778889999999899999999999999999999999984 566778999999999999987 66 8888
Q ss_pred HHHHHHHHH
Q 010744 203 FILMATLSV 211 (502)
Q Consensus 203 f~~~~~~~~ 211 (502)
++......+
T Consensus 383 ~~~~~~~~l 391 (394)
T TIGR00883 383 GYYLAALAL 391 (394)
T ss_pred HHHHHHHHH
Confidence 777665443
No 149
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.42 E-value=8e-12 Score=121.45 Aligned_cols=163 Identities=13% Similarity=0.072 Sum_probs=128.3
Q ss_pred hhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhh-HHHHHHHHH
Q 010744 58 NLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQ-HFLHVGMWR 136 (502)
Q Consensus 58 ~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r 136 (502)
.......|.+.+++|.+..+.|.+.+.+.++..++.++.|++.||+|||+.+..+..+.+++..+....+ +...+. -
T Consensus 222 ~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~ 299 (393)
T PRK09705 222 ASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLW--A 299 (393)
T ss_pred HHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHH--H
Confidence 3444456666677899999999999999999999999999999999999999998888877776655333 222222 2
Q ss_pred HHHhhhhhhhhhhhHHHHhhccC-CCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHH
Q 010744 137 AVNGFGLAIVIPALQSFIADSYK-DGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAF 215 (502)
Q Consensus 137 ~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~ 215 (502)
++.|++.+...+.......+..+ +++|++..|+.+....++..++|.+.+++.+.. .+|...|++.++.+++..+
T Consensus 300 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~----g~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK09705 300 MVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSIS----GNYLMDWAFHALCVVGLMI 375 (393)
T ss_pred HHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----CCchHHHHHHHHHHHHHHH
Confidence 46688888888877777777775 578999999999999999999999999999871 2488888888877777766
Q ss_pred HHHHhccCCcc
Q 010744 216 LVLVFVVDPRK 226 (502)
Q Consensus 216 ~~~~~~~~~~~ 226 (502)
..+.+.||++.
T Consensus 376 ~~~~~~~~~~~ 386 (393)
T PRK09705 376 ITLRFAPARFP 386 (393)
T ss_pred HHHHhcccccc
Confidence 66666666543
No 150
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.39 E-value=2.7e-11 Score=119.97 Aligned_cols=156 Identities=21% Similarity=0.195 Sum_probs=140.6
Q ss_pred hchhhHHHHH-hhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 010744 59 LLPSVYKEVS-EAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRA 137 (502)
Q Consensus 59 ~~~~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 137 (502)
.+..++|.+. +++|.++...|++.+++.+|..++++..+++.+|+++++.+..+.+.++++.+..+++++.+..++.-+
T Consensus 236 a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~ 315 (524)
T PF05977_consen 236 AVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALF 315 (524)
T ss_pred HHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 3345677765 568999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHH
Q 010744 138 VNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLV 217 (502)
Q Consensus 138 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~ 217 (502)
+.|++.....+...+.+.+..|++.|||+++++++....+..+|..+.|.+.+. .|.+..+.+.++..++..++.
T Consensus 316 l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~-----~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 316 LAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADH-----FGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998 899999988877655555555
Q ss_pred HH
Q 010744 218 LV 219 (502)
Q Consensus 218 ~~ 219 (502)
+.
T Consensus 391 ~~ 392 (524)
T PF05977_consen 391 LR 392 (524)
T ss_pred HH
Confidence 44
No 151
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.38 E-value=1.9e-11 Score=118.49 Aligned_cols=148 Identities=16% Similarity=0.110 Sum_probs=125.9
Q ss_pred hhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 010744 62 SVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNGF 141 (502)
Q Consensus 62 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 141 (502)
...|.+.+|.|.+..+.|.+.+...++..+..++.|++.||+|+|+.+..+.+..+++.++.+++++.+.+++..++.|+
T Consensus 226 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 305 (382)
T PRK11128 226 GFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCG 305 (382)
T ss_pred HHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 34455667899999999999999999999999999999999999999999999999988888889999999999999999
Q ss_pred hhhhhhhhhHHHHhhccCCCCcchhhhHHH-HHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHH
Q 010744 142 GLAIVIPALQSFIADSYKDGVRGAGFGLLS-LVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFL 216 (502)
Q Consensus 142 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~ 216 (502)
+.+...+....++.+. +++++++..+... ....+|..+||.++|.+.+. .|+ ..|+..+++.++..++
T Consensus 306 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~-----~g~-~~~~~~~~~~~~~~~~ 374 (382)
T PRK11128 306 TFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQH-----LGA-GVFWVMALVALPALFI 374 (382)
T ss_pred HHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccH-HHHHHHHHHHHHHHHH
Confidence 9999999999998887 5667788899886 66778889999999999987 777 4666666665544333
No 152
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.38 E-value=8.4e-12 Score=121.64 Aligned_cols=168 Identities=18% Similarity=0.224 Sum_probs=121.9
Q ss_pred HHHHHHHHHHhhhhchhhHHHH-HhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCch--hHH------HHHHHH
Q 010744 46 INLAAIMERADENLLPSVYKEV-SEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPA--VLT------IGILCW 116 (502)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~--~l~------~~~~~~ 116 (502)
..+..++............|.+ .+++|.+..+.+++.+...++..++.++.|++.||+|||+ ... .+.++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (399)
T TIGR00893 220 LALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVL 299 (399)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHH
Confidence 3444444444444555555554 4668989999999999999999999999999999999996 111 111111
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCc
Q 010744 117 AFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGV 196 (502)
Q Consensus 117 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~ 196 (502)
++........++.+..+....+.+.+.+ ..+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+.
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~----- 373 (399)
T TIGR00893 300 SLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAAT----- 373 (399)
T ss_pred HHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccC-----
Confidence 1222222223344555544455555544 7889999999999999999999999999999999999999999887
Q ss_pred cc-chHHHHHHHHHHHHHHHHHHH
Q 010744 197 PG-WRCAFILMATLSVLIAFLVLV 219 (502)
Q Consensus 197 ~~-wr~~f~~~~~~~~~~~~~~~~ 219 (502)
.| |++.|++.++..++..+..++
T Consensus 374 ~g~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 374 TGSFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHH
Confidence 67 999999988877776665543
No 153
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.37 E-value=7.6e-12 Score=123.31 Aligned_cols=131 Identities=18% Similarity=0.229 Sum_probs=100.1
Q ss_pred HHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchh
Q 010744 289 VFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNY 368 (502)
Q Consensus 289 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (502)
.+.|.+.+++|+|..+.+++.+...++..+++++.|++.||+|+|+.. ..+.++.. +........++ .
T Consensus 44 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~-------~~~~~~~~----~~~~~~~~~~~-~ 111 (434)
T PRK11663 44 AAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFM-------GIGLIATG----IINILFGFSSS-L 111 (434)
T ss_pred HhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhH-------HHHHHHHH----HHHHHHHHHhH-H
Confidence 568888888999999999999999999999999999999999999742 11121111 11111111222 3
Q ss_pred HHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 369 YTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 369 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
+.+.+..++.|++.+...+ ....++.|.+|+++|++++++.+...++|..++|.+.+.+.+..
T Consensus 112 ~~l~~~~~l~g~~~g~~~~-~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 174 (434)
T PRK11663 112 WAFALLWVLNAFFQGWGWP-VCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHY 174 (434)
T ss_pred HHHHHHHHHHHHHHHccch-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 4444555667777776666 67788899999999999999999999999999999999998763
No 154
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.36 E-value=2.2e-11 Score=118.74 Aligned_cols=144 Identities=13% Similarity=0.223 Sum_probs=124.9
Q ss_pred CCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhH
Q 010744 72 NAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQ 151 (502)
Q Consensus 72 ~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 151 (502)
+.+..+.|.+.++..+...++.+..|++.||+|+|+.+.++..+.++...+.+.++|.+.+++.+++.|++.........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556678888988899999999999999999999999999999999888888889999999999999999877767777
Q ss_pred HHHhhccCCCCcchhhhH-HHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHHHh
Q 010744 152 SFIADSYKDGVRGAGFGL-LSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVLVF 220 (502)
Q Consensus 152 ~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 220 (502)
.++.+..+++.++...+. .+....+|..+++.+++++.+. .||+..|.+.+++.++..++..+.
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~-----~G~~~~f~~~~~~~~i~~~~~~~~ 394 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDS-----IGFQGAYLVLGCIVLLFTLISVFT 394 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHh-----cccHHHHHHHHHHHHHHHHHHHHh
Confidence 788888888888887766 6788999999999999999997 899999999999888877766543
No 155
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.35 E-value=2.8e-11 Score=121.23 Aligned_cols=167 Identities=14% Similarity=0.115 Sum_probs=125.8
Q ss_pred hchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhh--HH-H-HHHH
Q 010744 59 LLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQ--HF-L-HVGM 134 (502)
Q Consensus 59 ~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~-~-~l~~ 134 (502)
......|.+.+++|.+.....+......+...++.++.|+++||+|||++++.+.++.+++.++.+... +. + ....
T Consensus 289 ~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~ 368 (479)
T PRK10077 289 VVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALL 368 (479)
T ss_pred HHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHH
Confidence 334456888889998888778888888889999999999999999999999999999999888776532 11 1 2223
Q ss_pred HHHHHhhhhhh-hhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcc-cCcccchHHHHHHHHHHHH
Q 010744 135 WRAVNGFGLAI-VIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQF-WGVPGWRCAFILMATLSVL 212 (502)
Q Consensus 135 ~r~l~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~-~~~~~wr~~f~~~~~~~~~ 212 (502)
+-++.+.+.+. ..+....++.|.+|+++|++++|+......+|.++++.+.+.+.+... .+..+|++.|++.++++++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (479)
T PRK10077 369 SMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVL 448 (479)
T ss_pred HHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHH
Confidence 33444444443 236778999999999999999999999999999998777655441000 0127899999999888888
Q ss_pred HHHHHHHhccCCc
Q 010744 213 IAFLVLVFVVDPR 225 (502)
Q Consensus 213 ~~~~~~~~~~~~~ 225 (502)
..++.+++.||++
T Consensus 449 ~~~~~~~~~~e~~ 461 (479)
T PRK10077 449 AALFMWKFVPETK 461 (479)
T ss_pred HHHHHHhccccCC
Confidence 8777777666654
No 156
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.35 E-value=4.5e-11 Score=111.55 Aligned_cols=166 Identities=14% Similarity=0.082 Sum_probs=137.8
Q ss_pred HHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhh-hHH
Q 010744 51 IMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGAS-QHF 129 (502)
Q Consensus 51 ~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~ 129 (502)
+........+..+-|.+.+..|.+.+.++++.-.|.++..+++++.|++.|| +.|+.+.....+.++..+...+. ++.
T Consensus 222 l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~ 300 (394)
T COG2814 222 LFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASP 300 (394)
T ss_pred HHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchH
Confidence 3333444567788899999999999999999999999999999999999999 99999999988887777776664 555
Q ss_pred HHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHH
Q 010744 130 LHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATL 209 (502)
Q Consensus 130 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~ 209 (502)
+..++.-++.|++...........+++ ..|+.+..+.+++...+++|..+|..+++.+.++ .|+..+.++.+++
T Consensus 301 ~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~-----~g~~~~~~~~a~l 374 (394)
T COG2814 301 ALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDA-----LGYAATGWVGAAL 374 (394)
T ss_pred HHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hchHHHHHHHHHH
Confidence 566666777777766666666666666 4479999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHHHhccC
Q 010744 210 SVLIAFLVLVFVVD 223 (502)
Q Consensus 210 ~~~~~~~~~~~~~~ 223 (502)
.++..++.+...+.
T Consensus 375 ~~~a~~~~~~~~~~ 388 (394)
T COG2814 375 LLLALLLALLSARK 388 (394)
T ss_pred HHHHHHHHHHHHhc
Confidence 88887777665443
No 157
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.35 E-value=2.2e-11 Score=120.20 Aligned_cols=136 Identities=16% Similarity=0.131 Sum_probs=94.4
Q ss_pred HHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhH
Q 010744 290 FFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYY 369 (502)
Q Consensus 290 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (502)
..| ++++.|.++.+.++..+...++..++.++.|++.||+|||+... .+.++..... +.....+.......
T Consensus 49 ~~p-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~-------~~~~~~~~~~-~~~~~~~~~~~~~~ 119 (438)
T TIGR00712 49 AMP-YLVEQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLP-------AGLILSAAVM-LLMGFVPWATSSIA 119 (438)
T ss_pred hhH-HHHHcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehH-------HHHHHHHHHH-HHHhccccccchHH
Confidence 345 44557999999999999999999999999999999999987421 1111111111 11111111112234
Q ss_pred HHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcCC
Q 010744 370 TYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFGY 435 (502)
Q Consensus 370 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~ 435 (502)
.+.+..++.|++.+...+ .....+.|.+|+++|++++|+.+...++++.+++.+.+.+.+...+|
T Consensus 120 ~l~~~~~l~g~~~g~~~~-~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w 184 (438)
T TIGR00712 120 IMFVLLFLNGWFQGMGWP-PCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDW 184 (438)
T ss_pred HHHHHHHHHHHHhhcchH-HHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhh
Confidence 444556677777776655 46677888999999999999999999999999998887766543333
No 158
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.35 E-value=4e-10 Score=107.51 Aligned_cols=328 Identities=15% Similarity=0.151 Sum_probs=197.5
Q ss_pred CchHH-HHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHh
Q 010744 77 DLGYL-TFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIA 155 (502)
Q Consensus 77 ~~g~~-~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 155 (502)
..|+. .++-...+.++.++.+.+.|+.|.|+.++++...+..-.+.+-+- |-+-+++...+.|+|.+..+..--.+++
T Consensus 50 ~aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~-N~y~~yfssallG~Gaallw~GqG~ylt 128 (461)
T KOG3098|consen 50 YAGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP-NSYYLYFSSALLGFGAALLWTGQGGYLT 128 (461)
T ss_pred CccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc-chHHHHHHHHHhhhhHHheecccceehh
Confidence 34544 677888889999999999999999999999999998888777664 4556677889999999999999999999
Q ss_pred hccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccC---cccch-HH----------HHHHHHHHHHHHHHHHHhc
Q 010744 156 DSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWG---VPGWR-CA----------FILMATLSVLIAFLVLVFV 221 (502)
Q Consensus 156 ~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~---~~~wr-~~----------f~~~~~~~~~~~~~~~~~~ 221 (502)
+..++|++.+-.++..+....+.++|..+-..+......+ ..+-+ +. ..+.+++..+..+...-..
T Consensus 129 ~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~ 208 (461)
T KOG3098|consen 129 SNSTRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFD 208 (461)
T ss_pred hcCChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhhee
Confidence 9999999999999999999999888877766554332100 11111 11 1111111111111111111
Q ss_pred cCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhhhhH-HHHHHHHH---H
Q 010744 222 VDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLPWTAM-VFFTMWFE---L 297 (502)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~ 297 (502)
..|....... + +.. + ....+..+..-+++++++...+...++......... ...|..+. .
T Consensus 209 ~~p~~~~~~~----~---------~~~--~-~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~ 272 (461)
T KOG3098|consen 209 FLPSKDVVNC----K---------SSS--E-TSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRK 272 (461)
T ss_pred ecCccchhhh----h---------hhc--c-ccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhh
Confidence 1111110000 0 000 0 233444455556777777766666555543332222 33444332 2
Q ss_pred hCCCh-hhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCc-----------
Q 010744 298 IGFDH-SSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSV----------- 365 (502)
Q Consensus 298 ~g~s~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 365 (502)
.+.+. ...++.....+++.+++....+.+.+|.++... .....++..+-.....+..+..+...
T Consensus 273 ~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~----~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~ 348 (461)
T KOG3098|consen 273 LGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGR----KPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLL 348 (461)
T ss_pred ccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhccc----CcchhHHHHHHHHHHHHHhccccccCCCCCCcccccc
Confidence 33332 233444445677777777777777776644322 11222223332333333333333211
Q ss_pred --chhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHH
Q 010744 366 --SNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGI 427 (502)
Q Consensus 366 --~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~ 427 (502)
+......+..++.|++-+.... ..+.+++..+| ++|..+.++...-..+...++-.....
T Consensus 349 ~~~~~~~~~ii~~l~G~~D~~~~t-~~~~ii~~~~~-~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 349 FTPSYYLALIIGFLLGFGDACFNT-QRYVIIALLYP-DDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred cccchhHHHHHHHHHhhHHHHHHH-HHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 1244566777889999888887 78888888884 788888888887777766655554433
No 159
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.34 E-value=1.6e-11 Score=120.25 Aligned_cols=136 Identities=13% Similarity=0.181 Sum_probs=114.9
Q ss_pred HHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHH-HHHhhhHHHHHHHHHHHHhhhh
Q 010744 65 KEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTA-AVGASQHFLHVGMWRAVNGFGL 143 (502)
Q Consensus 65 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~-~~~~~~~~~~l~~~r~l~G~~~ 143 (502)
+.+.+++|.+..+.+++.+...++..++.++.|++.||+|||+.+..+..+.++..+ +....++.+.+.+..++.|+..
T Consensus 263 ~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (405)
T TIGR00891 263 TYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLV 342 (405)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 345567899999999999999999999999999999999999998888776643332 3344566777777778888877
Q ss_pred hhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCccc-chHHHHH
Q 010744 144 AIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPG-WRCAFIL 205 (502)
Q Consensus 144 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~-wr~~f~~ 205 (502)
+...+....++.|.+|+++|++++|+.+....+|..++|++.+++.+. .| |+..+..
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~-----~g~~~~~~~~ 400 (405)
T TIGR00891 343 QGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQR-----LDEYGTALAS 400 (405)
T ss_pred ccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHh-----ccccchhHHh
Confidence 777888889999999999999999999999999999999999999987 67 7776655
No 160
>PRK10054 putative transporter; Provisional
Probab=99.33 E-value=4.3e-11 Score=116.34 Aligned_cols=154 Identities=16% Similarity=0.116 Sum_probs=128.2
Q ss_pred hhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHhhhhhhhh
Q 010744 69 EAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGAS-QHFLHVGMWRAVNGFGLAIVI 147 (502)
Q Consensus 69 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~ 147 (502)
++.+.+....+++.+.+.+.....+++.|++.||+++|+.+..+..+.+++.....++ ++.+.+++..++.|+|.+...
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (395)
T PRK10054 237 ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYA 316 (395)
T ss_pred cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHH
Confidence 4456666677888888888888888999999999999999999998888888777764 677777888999999998888
Q ss_pred hhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHHHhccCCccc
Q 010744 148 PALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKK 227 (502)
Q Consensus 148 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~ 227 (502)
|....++.+..|++.|+++.+..+ ...+|..+||.+++.+.++ .|.+..|++.+....+..++...-.++|+|.
T Consensus 317 p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (395)
T PRK10054 317 PGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTT-----LPPWSLFVILALAIVAAWLLMLKGMRARPWG 390 (395)
T ss_pred hhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHH-----cChhhHHHHHHHHHHHHHHHHHhccccCccc
Confidence 999999999999999999998765 5568999999999999998 8888888887777666666666656666664
Q ss_pred c
Q 010744 228 A 228 (502)
Q Consensus 228 ~ 228 (502)
.
T Consensus 391 ~ 391 (395)
T PRK10054 391 Q 391 (395)
T ss_pred C
Confidence 3
No 161
>PRK09952 shikimate transporter; Provisional
Probab=99.32 E-value=9.8e-11 Score=115.49 Aligned_cols=153 Identities=14% Similarity=0.134 Sum_probs=114.1
Q ss_pred HHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHh---h-hHHHHHHHHHHHHh
Q 010744 65 KEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGA---S-QHFLHVGMWRAVNG 140 (502)
Q Consensus 65 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~-~~~~~l~~~r~l~G 140 (502)
+.+.+++|.+......+.....+...++.++.|+++||+|||+++..+.++..++.+.+.. . ++.+.+++..++.|
T Consensus 275 ~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 354 (438)
T PRK09952 275 NYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLAN 354 (438)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 3455678888776656666666777888899999999999999988887766555443322 1 23444455667778
Q ss_pred hhhhhhhhhhHHHHhhccCCCCcchhhhHHH-HHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHHH
Q 010744 141 FGLAIVIPALQSFIADSYKDGVRGAGFGLLS-LVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVLV 219 (502)
Q Consensus 141 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~ 219 (502)
++.+...+...+++.|.+|.+.|+.+.++.. .+..+|..++|.+.+++.+.. ..+|+..+...++..++..+..+.
T Consensus 355 ~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~---~~~~~~~~~~~~~~~~i~~v~~~~ 431 (438)
T PRK09952 355 IAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYF---GGSWHSVAIYLLAGCLISAMTALL 431 (438)
T ss_pred HHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc---CCCchHHHHHHHHHHHHHHHHHHH
Confidence 8888888888999999999999999988854 445589999999999998741 135888888877777666666554
Q ss_pred h
Q 010744 220 F 220 (502)
Q Consensus 220 ~ 220 (502)
.
T Consensus 432 ~ 432 (438)
T PRK09952 432 M 432 (438)
T ss_pred c
Confidence 4
No 162
>PRK10504 putative transporter; Provisional
Probab=99.32 E-value=5.2e-11 Score=118.99 Aligned_cols=141 Identities=13% Similarity=0.136 Sum_probs=116.6
Q ss_pred HHHHHhhhhchhhHHHHHh-hcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhh---
Q 010744 51 IMERADENLLPSVYKEVSE-AFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGAS--- 126 (502)
Q Consensus 51 ~~~~~~~~~~~~~~~~i~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--- 126 (502)
++............|.+.+ .+|.++.+.+++.....++..++.++.|++.||+|+|+++..+.++.+++.++..+.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (471)
T PRK10504 271 FAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALL 350 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhcccc
Confidence 3333333445556676655 588899999999999999999999999999999999999999999888887766653
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhh
Q 010744 127 QHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGH 191 (502)
Q Consensus 127 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~ 191 (502)
++.+.+.+..++.|++.+...+....++.+..|+++++.+.++.+....+|..+|+.+++.+.+.
T Consensus 351 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~ 415 (471)
T PRK10504 351 GWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGL 415 (471)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444556678889999988999999999999999999999999999999999999999988775
No 163
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.31 E-value=2.4e-10 Score=114.07 Aligned_cols=155 Identities=14% Similarity=0.174 Sum_probs=123.6
Q ss_pred hHHHHHhhcCCCCCCchHHHH-HHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHH---Hhh-hHHHHHHHHHH
Q 010744 63 VYKEVSEAFNAGPSDLGYLTF-IRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAV---GAS-QHFLHVGMWRA 137 (502)
Q Consensus 63 ~~~~i~~~~~~s~~~~g~~~s-~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~l~~~r~ 137 (502)
..|.+.+++|.+.++.+++.. ...++..++.++.|+++||+|+|+.+.++.++.++..++. +.. ++.+.+...-+
T Consensus 245 ~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~ 324 (491)
T PRK11010 245 TTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVF 324 (491)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 445566789999999999984 5568999999999999999999998877666555544332 232 45555555666
Q ss_pred HHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHH
Q 010744 138 VNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLV 217 (502)
Q Consensus 138 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~ 217 (502)
++.++.+...+...++..+..+++.+++..++.+....+|..+++.+.+++.+. .||+..|.+.++++++..++.
T Consensus 325 l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~-----~G~~~~f~~~~~~~l~~l~~~ 399 (491)
T PRK11010 325 FENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEA-----HGWPTFYLFSVAAAVPGLLLL 399 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hChHHHHHHHHHHHHHHHHHH
Confidence 766666666677788899999999999999999999999999999999999987 899999999988888877766
Q ss_pred HHhcc
Q 010744 218 LVFVV 222 (502)
Q Consensus 218 ~~~~~ 222 (502)
.+..+
T Consensus 400 ~~~~~ 404 (491)
T PRK11010 400 LVCRQ 404 (491)
T ss_pred HHHHh
Confidence 66543
No 164
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.31 E-value=5.1e-11 Score=116.76 Aligned_cols=161 Identities=15% Similarity=0.178 Sum_probs=137.4
Q ss_pred hhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCc--hhHHHHHHHHHHHHHHHHh--------hh
Q 010744 58 NLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRP--AVLTIGILCWAFSTAAVGA--------SQ 127 (502)
Q Consensus 58 ~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr--~~l~~~~~~~~~~~~~~~~--------~~ 127 (502)
+..........+++|++..+...+.-+..+...++++++|++.||+|.| +++..++.++.+..+...+ .+
T Consensus 299 ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~ 378 (477)
T PF11700_consen 299 TIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLK 378 (477)
T ss_pred HHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcc
Confidence 3444455556679999999999999999999999999999999999999 8999998888666665555 67
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHH
Q 010744 128 HFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMA 207 (502)
Q Consensus 128 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~ 207 (502)
+-+.+.+.-++.|+..|...+...++.+|..|+++.+..+|++....-....+||++.+.+.+.. .+-|+.+....
T Consensus 379 ~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~t----g~~r~g~~~l~ 454 (477)
T PF11700_consen 379 SPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDAT----GSQRYGFLFLL 454 (477)
T ss_pred cHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh----CCchhHHHHHH
Confidence 88889999999999999999999999999999999999999999999999999999999999872 34788888877
Q ss_pred HHHHHHHHHHHHhcc
Q 010744 208 TLSVLIAFLVLVFVV 222 (502)
Q Consensus 208 ~~~~~~~~~~~~~~~ 222 (502)
++.++..++.++...
T Consensus 455 ~lf~~gl~ll~~v~~ 469 (477)
T PF11700_consen 455 VLFLIGLILLFFVDV 469 (477)
T ss_pred HHHHHHHHHHhhccc
Confidence 776666665554433
No 165
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.30 E-value=1.4e-11 Score=113.46 Aligned_cols=128 Identities=19% Similarity=0.190 Sum_probs=103.9
Q ss_pred HHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHH
Q 010744 291 FTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYT 370 (502)
Q Consensus 291 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (502)
.|...++.|+|..+.|.+.+.+.+..-++.++.|.++||.+.|+.+ ..++++ ..+..+.+...+ +..+
T Consensus 52 ~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm-------~~gLil----sai~nil~Gfs~-s~~~ 119 (448)
T COG2271 52 MPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFM-------AFGLIL----SAIVNILFGFSP-SLFL 119 (448)
T ss_pred cHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceee-------hHHHHH----HHHHHHHHhhhh-HHHH
Confidence 5777777889999999999999999999999999999999999842 222222 222222233333 5677
Q ss_pred HHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHH--HHHHHH
Q 010744 371 YAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLV--GILSEK 431 (502)
Q Consensus 371 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~--g~l~~~ 431 (502)
+.+...+.|.+.+...|| ....+..-+|+++||+..++-|+..|+|+++.|.+. +.+.++
T Consensus 120 ~~~l~~lng~fQg~Gwpp-~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~ 181 (448)
T COG2271 120 FAVLWVLNGWFQGMGWPP-CARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFH 181 (448)
T ss_pred HHHHHHHHHHHhcCCCcH-HHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhc
Confidence 888899999999999994 677778889999999999999999999999999998 888776
No 166
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.30 E-value=8e-11 Score=103.91 Aligned_cols=176 Identities=14% Similarity=0.107 Sum_probs=134.8
Q ss_pred hHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHH
Q 010744 39 ISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAF 118 (502)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 118 (502)
||..+..........+ ..+.++...|.+++.+|.|.+|...+.+...+|..+ .++.|.+.|++|++.++.+|.+...+
T Consensus 1 rW~~l~a~~~v~~~~G-t~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~ 78 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSG-TTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFV 78 (250)
T ss_pred ChhhHHHHHHHHHhcC-cccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 4555555554444443 446778888999999999999999999999999887 58899999999999999999999999
Q ss_pred HHHHHHhh-------hHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhh
Q 010744 119 STAAVGAS-------QHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGH 191 (502)
Q Consensus 119 ~~~~~~~~-------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~ 191 (502)
|..+...+ .++|.+.+..++.|.+.+....++.....+.|| ++||.+.|+.-...+++..+-..+...+.+.
T Consensus 79 GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 79 GYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 99877653 478888888899999888888888888889995 6899999999999999998887777776653
Q ss_pred cccCcccchHHHHHHHHHHHHHHHHHHHhccC
Q 010744 192 QFWGVPGWRCAFILMATLSVLIAFLVLVFVVD 223 (502)
Q Consensus 192 ~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~ 223 (502)
..-+.. +..+....++.++..++.+.
T Consensus 158 -----~~~~fl-l~la~~~~~v~l~~~~~vr~ 183 (250)
T PF06813_consen 158 -----DPSSFL-LFLAVLPAVVCLVAMFFVRP 183 (250)
T ss_pred -----ChHHHH-HHHHHHHHHHHHHHhhheec
Confidence 233333 33444444444444334433
No 167
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.29 E-value=7.6e-11 Score=116.90 Aligned_cols=172 Identities=13% Similarity=0.118 Sum_probs=116.6
Q ss_pred HHHHHHHHHHhhhhchhhHHHHHh-hcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhc--CCchhH-HHHHHHHHHHHH
Q 010744 46 INLAAIMERADENLLPSVYKEVSE-AFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINY--DRPAVL-TIGILCWAFSTA 121 (502)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~i~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~--Grr~~l-~~~~~~~~~~~~ 121 (502)
..+..++...........+|.+.+ +.|.+..+.+++...+.++..++.++.|+++||+ +||+.. .....+..++.+
T Consensus 258 ~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~ 337 (452)
T PRK11273 258 IAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATI 337 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHH
Confidence 333333333333344456666555 4789988999999999999999999999999999 555432 222333333333
Q ss_pred HHHh--hhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhh-HHHHHHHHHhhhcccCccc
Q 010744 122 AVGA--SQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGI-GGGVLATIMAGHQFWGVPG 198 (502)
Q Consensus 122 ~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-~g~~~~~~l~~~~~~~~~~ 198 (502)
+..+ ..+.+...+..++.|.+..........+..|.+|+++||+++|+.+....+|.. .+|.+.+.+.+. .|
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~-----~g 412 (452)
T PRK11273 338 VYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF-----FG 412 (452)
T ss_pred HHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHH-----hc
Confidence 3322 234444445555555543333333445678999999999999999988888765 479999999988 89
Q ss_pred chHHHHHHHHHHHHHHHHHHHhcc
Q 010744 199 WRCAFILMATLSVLIAFLVLVFVV 222 (502)
Q Consensus 199 wr~~f~~~~~~~~~~~~~~~~~~~ 222 (502)
|+..|++.++.+++..+....+..
T Consensus 413 ~~~~f~~~~~~~~~~~~~~~~~~~ 436 (452)
T PRK11273 413 WDGGFMVMIGGSILAVILLIVVMI 436 (452)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999988877776666554443
No 168
>PRK15075 citrate-proton symporter; Provisional
Probab=99.29 E-value=1.4e-10 Score=114.45 Aligned_cols=135 Identities=16% Similarity=0.074 Sum_probs=100.3
Q ss_pred hhhchhhHHHHHh-hcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHH-HH---HhhhHHHH
Q 010744 57 ENLLPSVYKEVSE-AFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTA-AV---GASQHFLH 131 (502)
Q Consensus 57 ~~~~~~~~~~i~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~-~~---~~~~~~~~ 131 (502)
........|.+.+ .+|.+..+.++....+.++..++.+++|+++||+|||+++..+..+..+... .. ...+++..
T Consensus 254 ~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (434)
T PRK15075 254 FYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFAR 333 (434)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHH
Confidence 3344455666655 4899988999999999999999999999999999999988776554433221 11 11234444
Q ss_pred HHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHH-HHhhhhhHHHHHHHHHhhh
Q 010744 132 VGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSL-VGTMGGIGGGVLATIMAGH 191 (502)
Q Consensus 132 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~g~~~~~~l~~~ 191 (502)
+.+..++.|++.+...+....++.|.+|+++|+.+.++... +..++..++|.+.+++.+.
T Consensus 334 ~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~ 394 (434)
T PRK15075 334 MLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHV 394 (434)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHh
Confidence 55556667777777777777889999999999999999644 4445577899999999887
No 169
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.29 E-value=2.3e-11 Score=117.19 Aligned_cols=130 Identities=18% Similarity=0.205 Sum_probs=119.0
Q ss_pred hhHHHHHhh-cCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhH-HHHHHHHHHHH
Q 010744 62 SVYKEVSEA-FNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQH-FLHVGMWRAVN 139 (502)
Q Consensus 62 ~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~-~~~l~~~r~l~ 139 (502)
...|.+.++ +|.+..+.+++.+...++..++.++.+++.||+|||+.+..+.++.+++.++..+.++ .+.+++..++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAI 311 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHH
Confidence 556777665 8999999999999999999999999999999999999999988888888888888774 88888999999
Q ss_pred hhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhh
Q 010744 140 GFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGH 191 (502)
Q Consensus 140 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~ 191 (502)
|++.+...+...+++.|.+|+++|+++.++.+....+|..+++.+++.+.+.
T Consensus 312 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~ 363 (365)
T TIGR00900 312 GVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADH 363 (365)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999875
No 170
>TIGR00895 2A0115 benzoate transport.
Probab=99.28 E-value=4.2e-11 Score=116.89 Aligned_cols=141 Identities=18% Similarity=0.122 Sum_probs=114.3
Q ss_pred HHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhh
Q 010744 48 LAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQ 127 (502)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 127 (502)
+..++............|.+.+++|.+..+.+++.+...++..++.++.|++.||+|||+.+....+......++....+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (398)
T TIGR00895 257 LLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLF 336 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhh
Confidence 33333334444455567788899999999999999999999999999999999999999555444444333333333356
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHH
Q 010744 128 HFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIM 188 (502)
Q Consensus 128 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 188 (502)
+.+.+++..++.|++.+...+...+++.|.+|+++|++++|+......+|..+||.+++++
T Consensus 337 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 337 SPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 7777888889999999999999999999999999999999999999999999999999875
No 171
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.27 E-value=1.2e-10 Score=114.93 Aligned_cols=141 Identities=16% Similarity=0.077 Sum_probs=106.4
Q ss_pred chhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 010744 60 LPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVN 139 (502)
Q Consensus 60 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 139 (502)
+...+|.+.++.|.++.+.+.+.+.+.++..++.++.|++.||+|||+.+..+.++.++..+.....++.....+.-++.
T Consensus 250 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (426)
T PRK12307 250 IFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLF 329 (426)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHH
Confidence 34456777777898988999999999999999999999999999999999988888776665544332211122222333
Q ss_pred hh--hhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHH
Q 010744 140 GF--GLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFIL 205 (502)
Q Consensus 140 G~--~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~ 205 (502)
|+ +..+..+..+.++.|.+|+++|++++|+......+|..++|.+.+++.+. .|+....++
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~-----~g~~~~~~~ 392 (426)
T PRK12307 330 GLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGIT-----MGLGAALTF 392 (426)
T ss_pred HHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHc-----ccHHHHHHH
Confidence 33 22233455667889999999999999999999999999999999999887 666554333
No 172
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.27 E-value=8.1e-11 Score=114.49 Aligned_cols=149 Identities=14% Similarity=0.010 Sum_probs=116.5
Q ss_pred hHHHHHhhcCCCCCCchHHHHHHHH-HHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHh------hhHHHHHHHH
Q 010744 63 VYKEVSEAFNAGPSDLGYLTFIRNF-VQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGA------SQHFLHVGMW 135 (502)
Q Consensus 63 ~~~~i~~~~~~s~~~~g~~~s~~~~-~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~------~~~~~~l~~~ 135 (502)
..+.+.+|.|.+++++|++...... ...++.++.|++.||+|+|+.+..+..+.++..+.... .++...+...
T Consensus 230 ~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (390)
T TIGR02718 230 LSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSC 309 (390)
T ss_pred HhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHH
Confidence 3455667789999999999888764 66677899999999999999998887766443332221 1233444555
Q ss_pred HHHHhhhhhhhhhhhHHHHhhccCC-CCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHH
Q 010744 136 RAVNGFGLAIVIPALQSFIADSYKD-GVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIA 214 (502)
Q Consensus 136 r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~ 214 (502)
..+.+++.+...+...+.+.+..++ +++++.+++.+....+|..+||.+++.+.+. .||+..|++.+++.++..
T Consensus 310 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~-----~G~~~~f~~~~~~~l~a~ 384 (390)
T TIGR02718 310 SAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDR-----FGYAGGFLSGTVLAVLAI 384 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HccHHHHHHHHHHHHHHH
Confidence 6667777788888888888788776 8899999999999999999999999999988 899999998877666654
Q ss_pred HH
Q 010744 215 FL 216 (502)
Q Consensus 215 ~~ 216 (502)
++
T Consensus 385 ~~ 386 (390)
T TIGR02718 385 LL 386 (390)
T ss_pred HH
Confidence 43
No 173
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.26 E-value=5.9e-11 Score=116.11 Aligned_cols=151 Identities=14% Similarity=0.139 Sum_probs=101.6
Q ss_pred HHHHHHHHHHhhhh-hhhhHHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhh-ccccCCcchhHHhhhh
Q 010744 270 TFQIIVLQGIVGSL-PWTAMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRI-SQAYPHSGRVMCAQFS 346 (502)
Q Consensus 270 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~ 346 (502)
.++......+...+ .++...++|.|+++ +|+++.+++.+.........++.+++|+++||+ |||+.. ..+
T Consensus 10 ~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~i-------liG 82 (493)
T PRK15462 10 AIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAV-------MLG 82 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHH-------HHH
Confidence 34444433333333 34455889999976 899999999999999999899999999999999 998742 222
Q ss_pred hhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCC--chhhHHHHHHHhhhhhhhhhHHH
Q 010744 347 AFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAK--HRTMIYAFDRAFEGSFSSFAAPL 424 (502)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~~~~~~~~~ 424 (502)
.++...... .+ ....... ....+.+.+..++.+...+ ...+++.|.+|++ +|.++.++.....++|+.++|.+
T Consensus 83 ~il~~lg~l-ll-~~~~~~~--~~~~l~l~li~iG~G~~~~-~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l 157 (493)
T PRK15462 83 ALLMAIGHV-VL-GASEIHP--SFLYLSLAIIVCGYGLFKS-NVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIA 157 (493)
T ss_pred HHHHHHHHH-HH-HHhhcch--hHHHHHHHHHHHhcccccc-cHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHH
Confidence 222111111 11 1111111 1122233334455555444 5678899999875 69999999999999999999999
Q ss_pred HHHHHHHh
Q 010744 425 VGILSEKM 432 (502)
Q Consensus 425 ~g~l~~~~ 432 (502)
.|++.+..
T Consensus 158 ~g~L~~~~ 165 (493)
T PRK15462 158 CGYAQEEY 165 (493)
T ss_pred HHHHHhhh
Confidence 99998874
No 174
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.25 E-value=2.2e-10 Score=112.16 Aligned_cols=153 Identities=12% Similarity=0.036 Sum_probs=120.6
Q ss_pred HHHH-HhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhh-----hHHHHHHHHHH
Q 010744 64 YKEV-SEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGAS-----QHFLHVGMWRA 137 (502)
Q Consensus 64 ~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~ 137 (502)
.|.+ .+++|.++.+.++......++..++.++.|++.||+|+|+.+.++.++.+++.++..+. ++.+++++.-+
T Consensus 238 ~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 317 (406)
T PRK15402 238 SPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLS 317 (406)
T ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHH
Confidence 4444 56789999999998888888899999999999999999999999988888887777654 35667788889
Q ss_pred HHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHH
Q 010744 138 VNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLV 217 (502)
Q Consensus 138 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~ 217 (502)
+.|++.+...+......... ++++||++.+..+....+|..+|+.+++.+.+. .+|....+..++.+++..+..
T Consensus 318 ~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~ 391 (406)
T PRK15402 318 LYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLG-----GGNGLFNLFNLANGLLWLLLV 391 (406)
T ss_pred HHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccC-----CchHHHHHHHHHHHHHHHHHH
Confidence 99999988877766655444 468999999999999999999999999998876 677666655555555554444
Q ss_pred HHhcc
Q 010744 218 LVFVV 222 (502)
Q Consensus 218 ~~~~~ 222 (502)
..+.+
T Consensus 392 ~~~~~ 396 (406)
T PRK15402 392 RIFLK 396 (406)
T ss_pred HHHhc
Confidence 44443
No 175
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.24 E-value=2.4e-10 Score=114.87 Aligned_cols=167 Identities=12% Similarity=0.014 Sum_probs=111.5
Q ss_pred hchhhHHHHHhhcCCCCCCchH------------HHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhh
Q 010744 59 LLPSVYKEVSEAFNAGPSDLGY------------LTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGAS 126 (502)
Q Consensus 59 ~~~~~~~~i~~~~~~s~~~~g~------------~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 126 (502)
......|.+.++.|.+..+.+. ......++..++.++.+++.||+|||++++++..+.+++.++.++.
T Consensus 306 ~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~ 385 (502)
T TIGR00887 306 GVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFA 385 (502)
T ss_pred ccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 3444578888888887654321 1233445666688899999999999999988888887777666543
Q ss_pred hH----HHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhccc-----Ccc
Q 010744 127 QH----FLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFW-----GVP 197 (502)
Q Consensus 127 ~~----~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~-----~~~ 197 (502)
.+ ...+...-+...++..+..+....+.+|.+|.+.|+++.++.+....+|.++++.+.+.+.+.... ...
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 465 (502)
T TIGR00887 386 YNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGI 465 (502)
T ss_pred HHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccc
Confidence 21 111111111122222234456677789999999999999999999999999999999988763100 013
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhccCCcc
Q 010744 198 GWRCAFILMATLSVLIAFLVLVFVVDPRK 226 (502)
Q Consensus 198 ~wr~~f~~~~~~~~~~~~~~~~~~~~~~~ 226 (502)
++...|++.++..++..+.. ++.||++.
T Consensus 466 ~~~~~~~i~~~~~~~~~i~~-~~lpEt~~ 493 (502)
T TIGR00887 466 WMGHVLEIFALFMFLGILFT-LLIPETKG 493 (502)
T ss_pred cchHHHHHHHHHHHHHHHHh-eEeccCCC
Confidence 55678888887777665554 44455443
No 176
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.24 E-value=6e-10 Score=103.57 Aligned_cols=368 Identities=13% Similarity=0.119 Sum_probs=197.8
Q ss_pred HHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhh----cCCch-hHHHHHHHHHHHHHHHHhhhH
Q 010744 54 RADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVIN----YDRPA-VLTIGILCWAFSTAAVGASQH 128 (502)
Q Consensus 54 ~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~~~~ 128 (502)
.+....--..++++..++|++....+.+--..-+...+.+|+.|..+|| ||||| .+..+.+..+++.++..++.+
T Consensus 45 qf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaD 124 (498)
T KOG0637|consen 45 QFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAAD 124 (498)
T ss_pred HHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhh
Confidence 3333333445667788999999999888888888899999999999995 89988 455666677888888888765
Q ss_pred HH-----------------HHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcch-hhhHHHHHHhhhhhHHHHHHHHHhh
Q 010744 129 FL-----------------HVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGA-GFGLLSLVGTMGGIGGGVLATIMAG 190 (502)
Q Consensus 129 ~~-----------------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~G~~~g~~~~~~l~~ 190 (502)
+. .++++-.+.-++.-.....+.+++.|...++++.+ +++.+....++|.++|..++++.
T Consensus 125 ig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~-- 202 (498)
T KOG0637|consen 125 IGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL-- 202 (498)
T ss_pred hhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc--
Confidence 43 34555556666777888899999999998777766 99999999999999999888743
Q ss_pred hcccCcccch--HHHHHHHHHHHHHHHHHHHhccC-------CccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHH
Q 010744 191 HQFWGVPGWR--CAFILMATLSVLIAFLVLVFVVD-------PRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMA 261 (502)
Q Consensus 191 ~~~~~~~~wr--~~f~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (502)
+|+ .+|.....+-+.+..+...+..+ +... ....+|+++..+......+..+.....+....
T Consensus 203 -------~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~--l~~~~~~~~s~~~~~~~~~~~~~~~~~e~fG~ 273 (498)
T KOG0637|consen 203 -------GLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSES--LWYPQEKPLSPKGTTARSKSSKLPFLLEIFGA 273 (498)
T ss_pred -------CceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheecccc--cccccccCCCCCcccccccccCcchHHHHhch
Confidence 333 23333333333333222221111 1111 00111111111110000111111111122221
Q ss_pred HhhhcchhHHHHHHHHHHhhhhhhhhH-HHHHHHHH-H-hCCChhh-----------H-----HHHHHHHHhhhcccccc
Q 010744 262 TKAVIKVPTFQIIVLQGIVGSLPWTAM-VFFTMWFE-L-IGFDHSS-----------T-----AALLSLFAIGCAVGSFL 322 (502)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~-~g~s~~~-----------~-----~~~~~~~~~~~~~~~~~ 322 (502)
. ....|..+.+.+...+.+..+..+ .|...++- + ++-++.. . .+=+.+..+...+-+..
T Consensus 274 ~--~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~ 351 (498)
T KOG0637|consen 274 L--KVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLL 351 (498)
T ss_pred H--hhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHH
Confidence 1 112355666666666666654444 55556653 2 4333211 1 12233455555666778
Q ss_pred hhhhhhhhccccCCcchhHHhhhhh-hhh-hhHHHHHhh-----h-c-cCCcchhHHHHHHHHHHHHHHhhhccCCCccc
Q 010744 323 GGVVADRISQAYPHSGRVMCAQFSA-FMG-IPFSWFLLT-----A-I-PQSVSNYYTYAVTLVLMGLTISWNATAANGPM 393 (502)
Q Consensus 323 ~g~l~d~~g~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~-----~-~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 393 (502)
..++.||+|.|+...........+. +.+ .+....... . . .......+.+.......|+-....+. +.+..
T Consensus 352 ~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~~~g~~~a~t~~-~pf~~ 430 (498)
T KOG0637|consen 352 VEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYAILGIPLAITFS-IPFAL 430 (498)
T ss_pred HHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHHHhCCccccccc-ccccc
Confidence 8899999996554332221111111 111 000000000 0 0 00011112222333333433332222 23333
Q ss_pred hhcccCC--CchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcCC
Q 010744 394 FAEVVPA--KHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFGY 435 (502)
Q Consensus 394 ~~~~~p~--~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~ 435 (502)
.+..... .-+|...|+.|....+...+.....|.+.+..|+-
T Consensus 431 ~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~ 474 (498)
T KOG0637|consen 431 ASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGG 474 (498)
T ss_pred ccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCc
Confidence 3321222 23467778888888888888888788888887654
No 177
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.23 E-value=6.3e-11 Score=115.13 Aligned_cols=131 Identities=18% Similarity=0.145 Sum_probs=100.5
Q ss_pred HHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchh
Q 010744 289 VFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNY 368 (502)
Q Consensus 289 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (502)
...|.+.+++|.++.+.++..+...++..++.++.|++.||+|||+.. ..+..+....... ....+ ..
T Consensus 26 ~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~-------~~~~~~~~~~~~~----~~~~~-~~ 93 (385)
T TIGR00710 26 PAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVL-------LLGLFIFALSSLG----LALSN-NI 93 (385)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH-------HHHHHHHHHHHHH----HHHHc-cH
Confidence 456777788999999999999999999999999999999999998742 1122111111111 11122 23
Q ss_pred HHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 369 YTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 369 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
+.+.+..++.|++.+...+ ....++.|.+|+++|+++.++.+....++..++|.+.+.+.+..
T Consensus 94 ~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 156 (385)
T TIGR00710 94 ETLLVLRFVQAFGASAGSV-ISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL 156 (385)
T ss_pred HHHHHHHHHHHcchhHHHH-HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4455667778888777766 67889999999999999999999999999999999999988873
No 178
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.23 E-value=1.1e-10 Score=110.13 Aligned_cols=149 Identities=13% Similarity=0.222 Sum_probs=131.3
Q ss_pred CCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHH
Q 010744 74 GPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSF 153 (502)
Q Consensus 74 s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 153 (502)
+....|.+.+..-+.-++...+..++.+|+|.|+.++++..+.++=..++++++|.+.+.+.+.+.|+-.+........+
T Consensus 257 g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkY 336 (412)
T PF01306_consen 257 GNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKY 336 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCCCCcchhhhHH-HHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHHHhccCCccc
Q 010744 154 IADSYKDGVRGAGFGLL-SLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKK 227 (502)
Q Consensus 154 i~~~~~~~~r~~~~~~~-~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~ 227 (502)
+++.+|+|-.++...+. +...++|.++.+.++|.+.++ .|.+.+|++.+.+.++..++..+..+++++.
T Consensus 337 I~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~-----~G~~~tylimg~iv~~~~li~~f~l~~~~~~ 406 (412)
T PF01306_consen 337 ITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDR-----IGFQHTYLIMGLIVLPFTLISAFTLKKDKKQ 406 (412)
T ss_dssp HHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHS--SSST
T ss_pred HHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhh-----cCcHHHHHHHHHHHHHHHHHheeeecCCCcc
Confidence 99999988888888774 788899999999999999998 8999999999999999999988887765543
No 179
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.22 E-value=1e-10 Score=116.04 Aligned_cols=150 Identities=9% Similarity=0.064 Sum_probs=107.2
Q ss_pred HHHHHHHHHHhhhhh-hhhHHHHHHHHHH---hCCChhhHHHHHHHHHhhhcccccchhhhhhh-hccccCCcchhHHhh
Q 010744 270 TFQIIVLQGIVGSLP-WTAMVFFTMWFEL---IGFDHSSTAALLSLFAIGCAVGSFLGGVVADR-ISQAYPHSGRVMCAQ 344 (502)
Q Consensus 270 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~ 344 (502)
.++.+....++.... +....++|.|+++ +|++..+++.+.+...++..++.+++|+++|| +|||+.. .
T Consensus 11 ~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l-------~ 83 (475)
T TIGR00924 11 PLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTM-------V 83 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHH-------H
Confidence 344444444443444 4555889999875 79999999999999999999999999999999 8999842 1
Q ss_pred hhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCc---hhhHHHHHHHhhhhhhhhh
Q 010744 345 FSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKH---RTMIYAFDRAFEGSFSSFA 421 (502)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~---~~~~~g~~~~~~~~~~~~~ 421 (502)
.+..+.. +........++ ...+.+...+.|++.+...+ ...+++.|.+|+++ |+++.++.+...++|..+|
T Consensus 84 ~~~~~~~----~g~~~~~~~~~-~~~~~~~~~l~g~g~g~~~~-~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig 157 (475)
T TIGR00924 84 LGGIVLM----LGHFMLAMSIY-PDLIFYGLGTIAVGSGLFKA-NPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFIS 157 (475)
T ss_pred HHHHHHH----HHHHHHHhccc-HhHHHHHHHHHHhccccccC-CHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHH
Confidence 2221111 11111111222 23344566677888777666 67788889888654 8889999999999999999
Q ss_pred HHHHHHHHHHh
Q 010744 422 APLVGILSEKM 432 (502)
Q Consensus 422 ~~~~g~l~~~~ 432 (502)
|.+.|++.++.
T Consensus 158 ~~l~g~l~~~~ 168 (475)
T TIGR00924 158 PLLAGVIAENY 168 (475)
T ss_pred HHHHHHHHHhc
Confidence 99999999874
No 180
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.20 E-value=7.8e-10 Score=103.25 Aligned_cols=159 Identities=14% Similarity=0.121 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHHHHhhhhchhhHHHHHh---hcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHH
Q 010744 42 SLILINLAAIMERADENLLPSVYKEVSE---AFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAF 118 (502)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 118 (502)
......+..++..........-.+.+.+ .+|.++++.++..+.+..+..++.+..+++.||+|+|+++.++..+.++
T Consensus 141 ~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~ 220 (310)
T TIGR01272 141 HLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVL 220 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 3334445555544344444444455443 3689999999999999999999999999999999999999999888888
Q ss_pred HHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCccc
Q 010744 119 STAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPG 198 (502)
Q Consensus 119 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~ 198 (502)
+.++....++...+ .+-++.|++.+..+|...+...+..|+ +.+++.++. ....+|.+++|++.|.+.+. .|
T Consensus 221 ~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~-----~g 292 (310)
T TIGR01272 221 LSIGAALTHGYVAM-WFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADC-----LG 292 (310)
T ss_pred HHHHHHHcCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHh-----cc
Confidence 87766665544333 355689999999999999999888854 456677775 56678999999999999987 78
Q ss_pred chHHHHHHHH
Q 010744 199 WRCAFILMAT 208 (502)
Q Consensus 199 wr~~f~~~~~ 208 (502)
.+..|++..+
T Consensus 293 ~~~a~~v~~~ 302 (310)
T TIGR01272 293 IQLAFALPVP 302 (310)
T ss_pred chHHHHHHHH
Confidence 8888875443
No 181
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.20 E-value=1.1e-09 Score=106.31 Aligned_cols=150 Identities=13% Similarity=0.079 Sum_probs=120.8
Q ss_pred hhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 010744 62 SVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNGF 141 (502)
Q Consensus 62 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 141 (502)
...|.+.+++|.+..+.+++.+.+.++..++.++.|++.||.++|..+....+......++....++.+.+.+..++.|+
T Consensus 238 ~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~ 317 (394)
T PRK10213 238 YIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGL 317 (394)
T ss_pred HHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 33577788899999999999999999999999999999999654434444443344445555566778888889999999
Q ss_pred hhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHH
Q 010744 142 GLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLV 217 (502)
Q Consensus 142 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~ 217 (502)
+.+...+...+++.+..| ++++++.+.......+|..+|+.+++++.+. .|++..++..+.+.++..+..
T Consensus 318 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~-----~g~~~~~~~~~~~~~~~~~~~ 387 (394)
T PRK10213 318 TFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDN-----IGLTSPLMLSGTLMLLTALLV 387 (394)
T ss_pred HHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cChhhHHHHHHHHHHHHHHHH
Confidence 999999999989998885 6677888888899999999999999999987 899999988776665554433
No 182
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.20 E-value=1e-09 Score=108.22 Aligned_cols=157 Identities=14% Similarity=0.020 Sum_probs=100.8
Q ss_pred hhhHHHH-HhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHH--h--hhHHHHHHHH
Q 010744 61 PSVYKEV-SEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVG--A--SQHFLHVGMW 135 (502)
Q Consensus 61 ~~~~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~--~--~~~~~~l~~~ 135 (502)
...+|.+ .+++|.+..+.++..++..+...+++++.|+++||+|||+++.++.++.++...... . .++....+..
T Consensus 263 ~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (432)
T PRK10406 263 TTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGL 342 (432)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHH
Confidence 3445554 466899888899999988888899999999999999999988776665443332211 1 1233322222
Q ss_pred HHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhh-hhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHH
Q 010744 136 RAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTM-GGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIA 214 (502)
Q Consensus 136 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~ 214 (502)
-.+.+++.+...+....++.|++|++.|+.++|+......+ .....|.+.+.+... ..|...++..++..++..
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~-----g~~~~~~~~~~~~~~i~~ 417 (432)
T PRK10406 343 VMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSI-----GMETAFFWYVTLMAVVAF 417 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHh-----CCCcHHHHHHHHHHHHHH
Confidence 22233333444455677889999999999999998865543 344477777755432 335556665555555554
Q ss_pred HHHHHhccC
Q 010744 215 FLVLVFVVD 223 (502)
Q Consensus 215 ~~~~~~~~~ 223 (502)
+..++ .++
T Consensus 418 ~~~~~-l~~ 425 (432)
T PRK10406 418 LVSLM-LHR 425 (432)
T ss_pred HHHHH-hhh
Confidence 44444 443
No 183
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.20 E-value=6.9e-11 Score=111.74 Aligned_cols=164 Identities=13% Similarity=0.089 Sum_probs=113.5
Q ss_pred hHHHHhhhcchhHHHHHHHHHHhhhhhhhhH-HHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCC
Q 010744 258 SWMATKAVIKVPTFQIIVLQGIVGSLPWTAM-VFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPH 336 (502)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~ 336 (502)
.+....+++.++....+.+...+..+..+.. +|+=-++++++..+..-|......-.+.++.-++.+++.+|+|+-+.+
T Consensus 360 v~a~~~~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~ 439 (618)
T KOG3762|consen 360 VLADVGKVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVM 439 (618)
T ss_pred HHHHHHHHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhccccee
Confidence 3333335566655555444443333333333 666566788887777778777777788888889999999999998753
Q ss_pred cchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhh-h
Q 010744 337 SGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFE-G 415 (502)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~-~ 415 (502)
.+++.+...=++.+..-.+ +|.....-++-|+..+.... ...+|++...||+.+.++.++..... .
T Consensus 440 -----------~lgLa~~~~Rf~~~S~L~n-~W~vLPieilqgit~aliWa-a~~sY~s~vaPp~l~at~Q~l~~g~f~G 506 (618)
T KOG3762|consen 440 -----------YLGLACNVGRFLYYSYLQN-PWMVLPIEILQGITHALIWA-AIISYASHVAPPGLRATAQGLLQGIFHG 506 (618)
T ss_pred -----------eehhhHHHHHHHHHHHhcC-chheeeHHHHHHHHHHHHHH-HHHHHHHhhCCCcchHHHHHHHHHHhcc
Confidence 2222222222233333333 44456777888998888888 78899999999999999999997665 4
Q ss_pred hhhhhhHHHHHHHHHHhcC
Q 010744 416 SFSSFAAPLVGILSEKMFG 434 (502)
Q Consensus 416 ~~~~~~~~~~g~l~~~~~~ 434 (502)
+|..+|++++|.+.+..+.
T Consensus 507 lG~g~GslIGG~~v~~fg~ 525 (618)
T KOG3762|consen 507 LGKGLGSLIGGFVVERFGA 525 (618)
T ss_pred cCcchhhhhhhhhheeehh
Confidence 6777999999999998653
No 184
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.19 E-value=7.9e-11 Score=112.87 Aligned_cols=131 Identities=19% Similarity=0.191 Sum_probs=101.0
Q ss_pred HHHH-HHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcch
Q 010744 289 VFFT-MWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSN 367 (502)
Q Consensus 289 ~~~~-~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (502)
..+| .+.+++|.++.+.+++.+...++..++.++.|++.||+|||+. ...+..+......+..+ . ++.
T Consensus 17 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-------l~~~~~~~~~~~~~~~~--~--~~~ 85 (352)
T PF07690_consen 17 PALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRV-------LIIGLLLFALGSLLLAF--A--SNF 85 (352)
T ss_dssp HHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHH-------HHHHHHHHHHHHHHHHH--H--CCH
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeee-------EeehhhhhhhHHHHhhh--h--hhH
Confidence 4566 4445699999999999999999999999999999999999973 22222222222111111 1 333
Q ss_pred hHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 368 YYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 368 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
+ .+.+..++.|++.+...+ ....++.|.+|+++|++++++.+....+|..++|.+.+.+.+..
T Consensus 86 ~-~~~~~~~l~g~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 148 (352)
T PF07690_consen 86 W-LLLIARFLLGIGSGFFSP-ASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF 148 (352)
T ss_dssp H-HHHHHHHHHHHHHHHHHH-HHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC
T ss_pred H-HHhhhccccccccccccc-cccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcc
Confidence 3 677888889999888777 78899999999999999999999999999999999999998663
No 185
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.19 E-value=2.6e-10 Score=113.95 Aligned_cols=155 Identities=12% Similarity=0.077 Sum_probs=101.8
Q ss_pred cchh-HHHHHHHHHHhhhhh-hhhHHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhh-hccccCCcchhH
Q 010744 266 IKVP-TFQIIVLQGIVGSLP-WTAMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADR-ISQAYPHSGRVM 341 (502)
Q Consensus 266 ~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~ 341 (502)
+++| .++......++..+. +....+++.|+++ +|++..+++..............+++|+++|| +|||+..
T Consensus 17 ~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~----- 91 (500)
T PRK09584 17 FKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVI----- 91 (500)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHH-----
Confidence 3444 355555555555454 4444789999865 99999988887776655555555789999999 5998742
Q ss_pred HhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCc--hhhHHHHHHHhhhhhhh
Q 010744 342 CAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKH--RTMIYAFDRAFEGSFSS 419 (502)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~--~~~~~g~~~~~~~~~~~ 419 (502)
..+..+..... ..+ .. ..+....+.+...+.|++.+...+ ...+++.|.+|+++ +..+.++.+...++|..
T Consensus 92 --~~g~~~~~ig~-~l~-~~--~~~~~~~l~~~~~l~gig~g~~~~-~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~ 164 (500)
T PRK09584 92 --MLGAIVLAIGY-ALV-AW--SGHDAGIVYMGMATIAVGNGLFKA-NPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSF 164 (500)
T ss_pred --HHHHHHHHHHH-HHH-HH--hcccHHHHHHHHHHHHHhhhcccC-CHHHHHHHhcCCCchhhhhcchHHHHHHHHHHH
Confidence 12221111111 111 11 111223344555667787777666 56788899998643 45678888999999999
Q ss_pred hhHHHHHHHHHHh
Q 010744 420 FAAPLVGILSEKM 432 (502)
Q Consensus 420 ~~~~~~g~l~~~~ 432 (502)
++|.+.|++.+..
T Consensus 165 ~gp~i~g~l~~~~ 177 (500)
T PRK09584 165 FSMLATPWLAAKY 177 (500)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999874
No 186
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.19 E-value=3.7e-10 Score=109.95 Aligned_cols=161 Identities=12% Similarity=0.105 Sum_probs=124.4
Q ss_pred hhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhh-hcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Q 010744 62 SVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVI-NYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNG 140 (502)
Q Consensus 62 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d-r~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 140 (502)
...|.+.+|.+.++.+.+++.+...++...+..+.+++.| |++.|+.+..+..+.+++.++.+++++++.+.+..++.|
T Consensus 229 ~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 308 (400)
T PRK11646 229 LMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFY 308 (400)
T ss_pred HhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 4567766666557788999988888777666666677666 567677788888888888888888898888888888999
Q ss_pred hhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCccc-chHHHHHHHHHHHHHHHHHHH
Q 010744 141 FGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPG-WRCAFILMATLSVLIAFLVLV 219 (502)
Q Consensus 141 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~-wr~~f~~~~~~~~~~~~~~~~ 219 (502)
++.+...|...+++.+..|+++||+++|+.+....+|..+||.+++++.+... ..+ -...++..++++++..+....
T Consensus 309 ~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (400)
T PRK11646 309 IGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGK--ALNQPELPWMMLGIIGLITLLALYW 386 (400)
T ss_pred HHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHh--hcCCcchHHHHHHHHHHHHHHHHHH
Confidence 99888889999999999999999999999999999999999999999988621 112 245566655555555554444
Q ss_pred hccCC
Q 010744 220 FVVDP 224 (502)
Q Consensus 220 ~~~~~ 224 (502)
..+++
T Consensus 387 ~~~~~ 391 (400)
T PRK11646 387 QFSQK 391 (400)
T ss_pred HHhhc
Confidence 33443
No 187
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.18 E-value=1.3e-09 Score=105.76 Aligned_cols=153 Identities=12% Similarity=0.060 Sum_probs=114.7
Q ss_pred hHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHhh
Q 010744 63 VYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGA-SQHFLHVGMWRAVNGF 141 (502)
Q Consensus 63 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~l~~~r~l~G~ 141 (502)
..|.+.+.+|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+.+++.++... .++.+...+..++.++
T Consensus 222 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 301 (382)
T PRK10091 222 IKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCA 301 (382)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 445666778999999999999999999999999999999999999999998888888765543 5556666666677777
Q ss_pred hhhhhhhhhHH-HHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHHHh
Q 010744 142 GLAIVIPALQS-FIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVLVF 220 (502)
Q Consensus 142 ~~~~~~~~~~~-~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 220 (502)
+.....+.... ...+..+++.++.+ ..+....+|..+||.+++.+.+. ..+|++.+.+.+.++++........
T Consensus 302 g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 302 GLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTL----GLAYNYVALPAALLSFAAMSSLLLY 375 (382)
T ss_pred HHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHc----ccCcchHHHHHHHHHHHHHHHHHHH
Confidence 66555554443 34444444555544 34667889999999999999884 1689999999887766655544444
Q ss_pred c
Q 010744 221 V 221 (502)
Q Consensus 221 ~ 221 (502)
.
T Consensus 376 ~ 376 (382)
T PRK10091 376 G 376 (382)
T ss_pred h
Confidence 3
No 188
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.18 E-value=4.1e-10 Score=104.15 Aligned_cols=172 Identities=19% Similarity=0.221 Sum_probs=138.0
Q ss_pred HHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHH
Q 010744 41 LSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFST 120 (502)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 120 (502)
...+++.-..+.++.+ ..+......-.+++|++..+..++.-...+..+++++++|+|.||+|.|+++..++++..+.+
T Consensus 254 i~~FLiA~~~~~DGv~-til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~ 332 (438)
T COG2270 254 LVLFLIARFFYIDGVN-TILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAA 332 (438)
T ss_pred hHHHHHHHHHHHhhHH-HHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHH
Confidence 3344444444444443 233333334455999999999999999999999999999999999999999999999999998
Q ss_pred HHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccch
Q 010744 121 AAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWR 200 (502)
Q Consensus 121 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr 200 (502)
+..-+...-..+.+.-.+.|...|+....+.++..+.+|+++-++.+|++....-.+..+||.+.+.+.+.+ .+-|
T Consensus 333 ~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iT----g~~r 408 (438)
T COG2270 333 LYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQIT----GSSR 408 (438)
T ss_pred HHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHh----cchh
Confidence 888777766667777899999999999999999999999999999999999999999999999999998863 4567
Q ss_pred HHHHHHHHHHHHHHHHH
Q 010744 201 CAFILMATLSVLIAFLV 217 (502)
Q Consensus 201 ~~f~~~~~~~~~~~~~~ 217 (502)
..+....++.++-.++.
T Consensus 409 ~g~~~i~vll~iGl~~L 425 (438)
T COG2270 409 AGVLSIIVLLLIGLLLL 425 (438)
T ss_pred hHHHHHHHHHHhhHhhE
Confidence 66666555443333333
No 189
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.18 E-value=2.1e-10 Score=113.47 Aligned_cols=118 Identities=19% Similarity=0.247 Sum_probs=103.5
Q ss_pred CCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHhhhhhhhhhhhHH
Q 010744 74 GPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGAS-QHFLHVGMWRAVNGFGLAIVIPALQS 152 (502)
Q Consensus 74 s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~ 152 (502)
+..+.+++.++..++..++.+++++++||+|+|+++..+.++.+++.++..+. ++.+.+++..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677888888899999999999999999999999999999888888777665 46677778889999999999999999
Q ss_pred HHhhccC-------CCCcchhhhHHHHHHhhhhhHHHHHHHHHhhh
Q 010744 153 FIADSYK-------DGVRGAGFGLLSLVGTMGGIGGGVLATIMAGH 191 (502)
Q Consensus 153 ~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~ 191 (502)
+++|..+ ++++|.+.|+.+....+|..+++.+.+.+.+.
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~ 380 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGI 380 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998865 45679999999999999999999999999876
No 190
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.18 E-value=2.6e-10 Score=113.62 Aligned_cols=149 Identities=13% Similarity=0.017 Sum_probs=105.7
Q ss_pred HHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCc-------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 010744 65 KEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRP-------AVLTIGILCWAFSTAAVGASQHFLHVGMWRA 137 (502)
Q Consensus 65 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr-------~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 137 (502)
+.+.+++|.+..+.+.+.+++.++..++.++.|+++||+||| ....+..++.++..++.+..++.+..++.-+
T Consensus 277 ~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~ 356 (476)
T PLN00028 277 EYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMI 356 (476)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence 344677899999999999999999999999999999999875 2333344444444455555666666666666
Q ss_pred HHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHH
Q 010744 138 VNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLV 217 (502)
Q Consensus 138 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~ 217 (502)
+.+++.+...+...+++.+.. +++|+...|+...+..+|..+++.+.+ ... ..+|+..|++.+++.++.+++.
T Consensus 357 l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~-----~~~y~~~f~~~~~~~~i~~~~~ 429 (476)
T PLN00028 357 LFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFF-TGS-----SYSTETGISLMGVMIIACTLPV 429 (476)
T ss_pred HHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHH-hcC-----CccHhhHHHHHHHHHHHHHHHH
Confidence 777766666666666666665 678999999987766666666665533 111 2579999999988777766655
Q ss_pred HHh
Q 010744 218 LVF 220 (502)
Q Consensus 218 ~~~ 220 (502)
++.
T Consensus 430 ~~~ 432 (476)
T PLN00028 430 AFI 432 (476)
T ss_pred Hhe
Confidence 544
No 191
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.18 E-value=8.5e-10 Score=106.14 Aligned_cols=175 Identities=13% Similarity=0.186 Sum_probs=138.2
Q ss_pred HHHHHhhhhchhhHHHHHhhcC-CCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhh-hH
Q 010744 51 IMERADENLLPSVYKEVSEAFN-AGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGAS-QH 128 (502)
Q Consensus 51 ~~~~~~~~~~~~~~~~i~~~~~-~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~ 128 (502)
++.+..........+...+|.| .+....+.+.++..+.-.+.-...+++..|+|.|+++.++.+.+++=..+.+.. ++
T Consensus 217 ~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~ 296 (400)
T PF03825_consen 217 FLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDP 296 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3444444445555566677777 677778888888888888999999999999999999999999999998888887 55
Q ss_pred HHHHH----HHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHH-HHhhhhhHHHHHHHHHhhhcc-cCcccchHH
Q 010744 129 FLHVG----MWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSL-VGTMGGIGGGVLATIMAGHQF-WGVPGWRCA 202 (502)
Q Consensus 129 ~~~l~----~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~g~~~~~~l~~~~~-~~~~~wr~~ 202 (502)
.+... ....+.|+..+..+.+...++.+.+|++.|+++.++++. ..++|..+|..++|++.+..+ .+...|...
T Consensus 297 ~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~ 376 (400)
T PF03825_consen 297 WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAV 376 (400)
T ss_pred cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHH
Confidence 44433 335679999999999999999999999999999999876 478999999999999998732 223456677
Q ss_pred HHHHHHHHHHHHHHHHHhccCCc
Q 010744 203 FILMATLSVLIAFLVLVFVVDPR 225 (502)
Q Consensus 203 f~~~~~~~~~~~~~~~~~~~~~~ 225 (502)
+.+.+++.++..++.+++.+|++
T Consensus 377 ~~v~a~~~~~~~~~f~~~fk~~~ 399 (400)
T PF03825_consen 377 FLVFAVMALVILVLFVILFKPKH 399 (400)
T ss_pred HHHHHHHHHHHHHHHHhhccCCC
Confidence 77777777777777766665543
No 192
>TIGR00898 2A0119 cation transport protein.
Probab=99.17 E-value=4.4e-10 Score=113.36 Aligned_cols=136 Identities=17% Similarity=0.189 Sum_probs=111.8
Q ss_pred HHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHH--HHHHHHHHHHhhhhhhhhhhhHHHHhhc
Q 010744 80 YLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHF--LHVGMWRAVNGFGLAIVIPALQSFIADS 157 (502)
Q Consensus 80 ~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 157 (502)
+......+....+.++.+++.||+|||+.+.++.++.+++.++..+.++. +..++.-++.+++.+...+....+..|.
T Consensus 359 ~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 438 (505)
T TIGR00898 359 LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAEL 438 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 34445566777888999999999999999999999999998888776544 4555566777777788888889999999
Q ss_pred cCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHHHhcc
Q 010744 158 YKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVLVFVV 222 (502)
Q Consensus 158 ~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~ 222 (502)
+|++.|+.++|+.+....+|.+++|.+.+ +.+ .++..++++.+...++..++.++++|
T Consensus 439 ~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~lpe 496 (505)
T TIGR00898 439 YPTVVRNLGVGVCSTMARVGSIISPFLVY-LGE------KWLFLPLVLFGGLALLAGILTLFLPE 496 (505)
T ss_pred ccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH------HHHhhHHHHHHHHHHHHHHHHHcCcC
Confidence 99999999999999999999999999998 443 57788888888888777777665543
No 193
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.17 E-value=5.2e-10 Score=103.42 Aligned_cols=174 Identities=15% Similarity=0.143 Sum_probs=134.5
Q ss_pred HHHHHHHHHHHHhhhhchhhHHH-HHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHH
Q 010744 44 ILINLAAIMERADENLLPSVYKE-VSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAA 122 (502)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 122 (502)
+.+++.++...-....++..+|. +.++|+.++.+.|.+...+.+...+..+.+|+++||+|.+|++.+....++++..+
T Consensus 221 W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~ 300 (417)
T COG2223 221 WLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAAL 300 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHH
Confidence 33444444444444445555554 56789999999999999999999999999999999999999999999999998888
Q ss_pred HHhh-------hHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccC
Q 010744 123 VGAS-------QHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWG 195 (502)
Q Consensus 123 ~~~~-------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~ 195 (502)
.+.. .+...+++.-+..++..|........++..++ +++-|.+.|+.....++|...-|..-+...+.+
T Consensus 301 l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if-~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~t--- 376 (417)
T COG2223 301 LSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIF-PKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLT--- 376 (417)
T ss_pred HHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHH-HhhhhHHHHHHHHhccccccchhHHHHHHHHhc---
Confidence 8775 34444444444555555555556677788888 558999999999999999988888888887762
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHhcc
Q 010744 196 VPGWRCAFILMATLSVLIAFLVLVFVV 222 (502)
Q Consensus 196 ~~~wr~~f~~~~~~~~~~~~~~~~~~~ 222 (502)
..++..|++.....+++.++.+....
T Consensus 377 -g~~~~~f~~~~~~~~~a~v~~~~~y~ 402 (417)
T COG2223 377 -GSYTGAFMLLLAFYLVALVLTWALYA 402 (417)
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35999999999888888887776554
No 194
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.16 E-value=1.6e-10 Score=112.56 Aligned_cols=130 Identities=12% Similarity=0.077 Sum_probs=97.2
Q ss_pred HHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchh
Q 010744 289 VFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNY 368 (502)
Q Consensus 289 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (502)
..+|.+.+++|.+..+.++..+...++..++.++.|+++||+|||+.. ..+...... ........++ .
T Consensus 24 ~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l-------~~~~~~~~i----~~~~~~~~~~-~ 91 (392)
T PRK10473 24 VGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVA-------IPGAALFII----ASLLCSLAET-S 91 (392)
T ss_pred hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHH-------HHHHHHHHH----HHHHHHHhCc-H
Confidence 568888888999999999999999999999999999999999998742 111111111 1111111222 3
Q ss_pred HHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHH
Q 010744 369 YTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEK 431 (502)
Q Consensus 369 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~ 431 (502)
..+.+..++.|++.+...+ ....++.|.+|+++|+++.++.+....++..++|.+.+.+.+.
T Consensus 92 ~~~~~~~~l~g~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~ 153 (392)
T PRK10473 92 SLFLAGRFLQGIGAGCCYV-VAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLK 153 (392)
T ss_pred HHHHHHHHHHHhhhhHHHH-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3344556677877776665 5778889999999999999999999999999999998888765
No 195
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.16 E-value=2.9e-10 Score=112.15 Aligned_cols=177 Identities=14% Similarity=0.195 Sum_probs=157.9
Q ss_pred HHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcC--CchhHHHHHHHHHH
Q 010744 41 LSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYD--RPAVLTIGILCWAF 118 (502)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G--rr~~l~~~~~~~~~ 118 (502)
.....+.+...+...........+|.+.++.+.+..+.+.+.++..+...++.++.|+++|+.. ++.+..++++..++
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl 377 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGL 377 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHH
Confidence 3456666677777777778888899999999999999999999999999999999999999988 45578888888999
Q ss_pred HHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCccc
Q 010744 119 STAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPG 198 (502)
Q Consensus 119 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~ 198 (502)
+.+.++++++++.++...++.|++.|.........+.|..+.++-..+.|+.....+++.++||++++++.+.. .+
T Consensus 378 ~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~t----g~ 453 (509)
T KOG2504|consen 378 ARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDIT----GN 453 (509)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeecc----CC
Confidence 99999999999999999999999999999988889999999999999999999999999999999999888762 34
Q ss_pred chHHHHHHHHHHHHHHHHHHHhc
Q 010744 199 WRCAFILMATLSVLIAFLVLVFV 221 (502)
Q Consensus 199 wr~~f~~~~~~~~~~~~~~~~~~ 221 (502)
|...|+..++..++.+...+..+
T Consensus 454 Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 454 YDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eeeehhhcChHHHHHHHHHHHhH
Confidence 99999999988887777666655
No 196
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.16 E-value=3.4e-10 Score=109.60 Aligned_cols=153 Identities=14% Similarity=0.050 Sum_probs=109.1
Q ss_pred HHHHHHHHHHhhhhchhhHHH-HHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCC-chhHH-HHH-HHHHHHHH
Q 010744 46 INLAAIMERADENLLPSVYKE-VSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDR-PAVLT-IGI-LCWAFSTA 121 (502)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~l~-~~~-~~~~~~~~ 121 (502)
+.+..++............|. +.+++|.++.+.+++.+.+.++..++.++.|++.||..+ |+... ... ....++..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~ 300 (379)
T TIGR00881 221 ISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLL 300 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHH
Confidence 333334333333334444454 456789999999999999999999999999999998643 33222 211 11222222
Q ss_pred HHHh--hhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccc
Q 010744 122 AVGA--SQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGW 199 (502)
Q Consensus 122 ~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~w 199 (502)
.... ..+.....+..++.|+......+....++.|.+|+++|+++.|+.+....+|..++|.+.+.+.+. .||
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-----~g~ 375 (379)
T TIGR00881 301 VYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADG-----FGW 375 (379)
T ss_pred HHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHh-----hcc
Confidence 2222 345556666777788766666666778899999999999999999999999999999999999988 899
Q ss_pred hHHH
Q 010744 200 RCAF 203 (502)
Q Consensus 200 r~~f 203 (502)
++.|
T Consensus 376 ~~~f 379 (379)
T TIGR00881 376 AGAF 379 (379)
T ss_pred cccC
Confidence 8764
No 197
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.15 E-value=1.4e-09 Score=106.20 Aligned_cols=151 Identities=13% Similarity=0.184 Sum_probs=111.1
Q ss_pred HHHHHhhcCCCCCCchHHHHHHH-HHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHH---Hhh-hHHHHHHHHHH-
Q 010744 64 YKEVSEAFNAGPSDLGYLTFIRN-FVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAV---GAS-QHFLHVGMWRA- 137 (502)
Q Consensus 64 ~~~i~~~~~~s~~~~g~~~s~~~-~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~l~~~r~- 137 (502)
.+.+.+++|.++++++++.+... .+..++.++.|++.||+|+|+.+..+.++.++..+.. ++. ++.+.+++.-+
T Consensus 233 ~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 312 (402)
T PRK11902 233 TTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGI 312 (402)
T ss_pred HHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 35577789999999999987654 5688999999999999999998887777666554433 343 45565555543
Q ss_pred ---HHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHH
Q 010744 138 ---VNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIA 214 (502)
Q Consensus 138 ---l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~ 214 (502)
..|++.+...+....++.+.+|.++ .++.+...++|..+++.+++.+.+. .||+..|.+.++++++..
T Consensus 313 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~G~l~~~-----~G~~~~f~~~~~~~~~~~ 383 (402)
T PRK11902 313 ENLCGGMGTAAFVALLMALCNRSFSATQ----YALLSALASVGRVYVGPTSGYLVEA-----YGWPGFYLMTVVIALPGL 383 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHH----HHHHHHHHHHHHHHHHHHHHHHHHH-----hChHHHHHHHHHHHHHHH
Confidence 4555566666677777777776554 4566666678887777889999998 899999999988887776
Q ss_pred HHHHHhccC
Q 010744 215 FLVLVFVVD 223 (502)
Q Consensus 215 ~~~~~~~~~ 223 (502)
++.+..+++
T Consensus 384 ~~~~~~~~~ 392 (402)
T PRK11902 384 ALLWLMRGT 392 (402)
T ss_pred HHHHHHhhh
Confidence 666554443
No 198
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.14 E-value=9.5e-10 Score=122.34 Aligned_cols=148 Identities=18% Similarity=0.158 Sum_probs=126.6
Q ss_pred HHHHHhhcCCCCC-CchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhh
Q 010744 64 YKEVSEAFNAGPS-DLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNGFG 142 (502)
Q Consensus 64 ~~~i~~~~~~s~~-~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 142 (502)
.+.+.+++|.+.. +.+++.+...++..+++++.|++.||+++|+++.++.++.+++.++..+.++.+.+++..++.|++
T Consensus 256 ~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 335 (1146)
T PRK08633 256 PAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFS 335 (1146)
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 3445677899998 999999999999999999999999999999999999999999988888888999998999999999
Q ss_pred hhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHH
Q 010744 143 LAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAF 215 (502)
Q Consensus 143 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~ 215 (502)
.+...+...+++.+.+|+++||+++++.+....+|.++++.+++.+... ..++...|++.+.+.++..+
T Consensus 336 ~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~ 404 (1146)
T PRK08633 336 AGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGL----GLSPAGLFYLIALVTLIGTL 404 (1146)
T ss_pred HHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHh----ccCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998888888776542 14566667666655544333
No 199
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.14 E-value=4.8e-10 Score=111.38 Aligned_cols=152 Identities=12% Similarity=0.107 Sum_probs=105.2
Q ss_pred hHHHHHHHHHHhhhhh-hhhHHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhh-hccccCCcchhHHhhh
Q 010744 269 PTFQIIVLQGIVGSLP-WTAMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADR-ISQAYPHSGRVMCAQF 345 (502)
Q Consensus 269 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~ 345 (502)
+.++......+.-.+. ++...+++.|+++ +|++..+++.+...+.....+..+++|+++|| +|||+.. ..
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~-------~~ 86 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTI-------VL 86 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHH-------HH
Confidence 3344444444444343 4444788888876 99999999888888877777777899999999 9999842 22
Q ss_pred hhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCC--chhhHHHHHHHhhhhhhhhhHH
Q 010744 346 SAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAK--HRTMIYAFDRAFEGSFSSFAAP 423 (502)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~~~~~~~~ 423 (502)
+..+..+....+.. . .+....+.+...+.|++.+...+ ...+++.|.+|++ +|+.+.++.....++|..++|.
T Consensus 87 g~~~~~~g~~~~~~--~--~~~~~ll~~~~~l~~ig~g~~~~-~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~ 161 (489)
T PRK10207 87 GAIVLAIGYFMTGM--S--LLKPDLIFIALGTIAVGNGLFKA-NPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLS 161 (489)
T ss_pred HHHHHHHHHHHHHH--h--ccchhHHHHHHHHHHhccccccC-CHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHH
Confidence 22222211111111 1 11122233556667888887777 6788999999877 4577899999999999999999
Q ss_pred HHHHHHHHh
Q 010744 424 LVGILSEKM 432 (502)
Q Consensus 424 ~~g~l~~~~ 432 (502)
+.|++.++.
T Consensus 162 l~g~l~~~~ 170 (489)
T PRK10207 162 LAPVIADKF 170 (489)
T ss_pred HHHHHHHhh
Confidence 999999885
No 200
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.14 E-value=3.1e-10 Score=110.98 Aligned_cols=129 Identities=11% Similarity=-0.076 Sum_probs=97.6
Q ss_pred HHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhH
Q 010744 290 FFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYY 369 (502)
Q Consensus 290 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (502)
..|.+.+++|.+..+.++..+...++..++++..|++.||+|||+.. ..+.++.. +........++ ..
T Consensus 30 ~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~-------~~~~~~~~----~~~~~~~~~~~-~~ 97 (412)
T TIGR02332 30 AGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWI-------AGIMVLWG----IASTATMFATG-PE 97 (412)
T ss_pred HHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHH-------HHHHHHHH----HHHHHHHHhcC-HH
Confidence 35655567999999999999999999999999999999999999842 11111111 11111111222 34
Q ss_pred HHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHH
Q 010744 370 TYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEK 431 (502)
Q Consensus 370 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~ 431 (502)
.+.+.-++.|++.+...+ ....++.|.+|+++|+++.++.+....+|..+++.+.+.+.+.
T Consensus 98 ~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~ 158 (412)
T TIGR02332 98 SLYLLRILVGIAEAGFLP-GILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILAL 158 (412)
T ss_pred HHHHHHHHHHHHHhhHHH-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 455677788988887766 5677889999999999999999999999999999999988753
No 201
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.14 E-value=3e-09 Score=103.34 Aligned_cols=144 Identities=11% Similarity=0.024 Sum_probs=114.9
Q ss_pred HHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhh
Q 010744 65 KEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNGFGLA 144 (502)
Q Consensus 65 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 144 (502)
+.+.+.+|.++.+.|++.+.+.++..++++..+++.||+++|+++..+. +.++..++.++.++++..++..++.|++.+
T Consensus 230 ~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~g 308 (393)
T PRK11195 230 AWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMALQHSLLPAYPLLILIGALGG 308 (393)
T ss_pred HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHhhh
Confidence 3456678999999999999999999999999999999999999888875 445555556677888878888889999999
Q ss_pred hhhhhhHHHHhhccCCCC-cchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHH
Q 010744 145 IVIPALQSFIADSYKDGV-RGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAF 215 (502)
Q Consensus 145 ~~~~~~~~~i~~~~~~~~-r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~ 215 (502)
...+...+.+.+..|+++ +|++.++.+....+|..++..+.+.+.. .|-|..+.+.+...++...
T Consensus 309 ~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 374 (393)
T PRK11195 309 FFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVK------LGVPVVAVIVGFGLLVALA 374 (393)
T ss_pred hhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHH
Confidence 888888888888766554 7999999999999999999999987754 4555555554433333333
No 202
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.13 E-value=1.6e-09 Score=104.93 Aligned_cols=153 Identities=12% Similarity=0.076 Sum_probs=103.7
Q ss_pred hhHHHHHHHHHHhhhhhhhhHH-HHHHHHH-HhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhh
Q 010744 268 VPTFQIIVLQGIVGSLPWTAMV-FFTMWFE-LIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQF 345 (502)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 345 (502)
+|.++...+.....+..+.... ..+.+-+ ++|+|..+.+++.++..++..+.++..|++.||+|.|+.. ...
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~------~~~ 106 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWT------VFS 106 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH------HHH
Confidence 3566666666666666666663 3455555 5999999999999999999999999999999999999742 111
Q ss_pred hhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHH
Q 010744 346 SAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLV 425 (502)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~ 425 (502)
..+.+++.....+ ......++...+.+.-++.|++ +...+ .....+++.+|+++||++.|+....+++|..+++.+.
T Consensus 107 ~ll~~i~~~~~~~-a~~~~~~s~~~lli~r~l~Gig-g~~f~-~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~ 183 (462)
T PRK15034 107 TAILIIPCVWLGI-AVQNPNTPFGIFIVIALLCGFA-GANFA-SSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVA 183 (462)
T ss_pred HHHHHHHHHHHHH-HHcccCCCHHHHHHHHHHHHHH-HHhHH-HHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHH
Confidence 1111111111111 1111112355566777788886 44555 5778889999999999999999877788887776666
Q ss_pred HHHH
Q 010744 426 GILS 429 (502)
Q Consensus 426 g~l~ 429 (502)
..+.
T Consensus 184 p~~i 187 (462)
T PRK15034 184 PLVI 187 (462)
T ss_pred HHHH
Confidence 5543
No 203
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.12 E-value=1e-09 Score=105.35 Aligned_cols=132 Identities=14% Similarity=0.113 Sum_probs=108.2
Q ss_pred hchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhc-CCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 010744 59 LLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINY-DRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRA 137 (502)
Q Consensus 59 ~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 137 (502)
......|.+.++.|.+..+.+.+.+.+.++..+++++.|++.||+ +||+.+..+.++.+++.++..+.++.+... .-+
T Consensus 215 ~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 293 (355)
T TIGR00896 215 SLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WAL 293 (355)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHH
Confidence 334456777778899999999999999999999999999999999 566677888888888887777765543332 457
Q ss_pred HHhhhhhhhhhhhHHHHhhccC-CCCcchhhhHHHHHHhhhhhHHHHHHHHHhhh
Q 010744 138 VNGFGLAIVIPALQSFIADSYK-DGVRGAGFGLLSLVGTMGGIGGGVLATIMAGH 191 (502)
Q Consensus 138 l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~ 191 (502)
+.|++.+...+...+.+.+..+ +++++...++.+....+|..++|.+.+++.++
T Consensus 294 l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~ 348 (355)
T TIGR00896 294 VLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDI 348 (355)
T ss_pred HHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999888787765554 56678999999998999999999999999886
No 204
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.12 E-value=4.8e-10 Score=108.11 Aligned_cols=147 Identities=12% Similarity=0.129 Sum_probs=100.9
Q ss_pred HHHHHHHHhhhhhhhhH-HHHHHHH-HHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhh
Q 010744 272 QIIVLQGIVGSLPWTAM-VFFTMWF-ELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFM 349 (502)
Q Consensus 272 ~~~~~~~~~~~~~~~~~-~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 349 (502)
+......+.....+... .+.|.++ +++|+|+.+.+++.+...++..++.++.|++.||+|||+.. ..+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~-------~~~~~~ 76 (366)
T TIGR00886 4 FFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTT-------TLSLLL 76 (366)
T ss_pred HHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHH-------HHHHHH
Confidence 34444444444444444 6778645 55999999999999999999999999999999999999842 111221
Q ss_pred hhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHH
Q 010744 350 GIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILS 429 (502)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~ 429 (502)
........ ...+...+.+.+..++.|++.+.. + ....++.|.+|+++|+++.++.....++|..+++.+.+.+.
T Consensus 77 ~~i~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~-~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 150 (366)
T TIGR00886 77 LAIPCLWA----GLAVQSYSVLLLLRLFIGIAGGSF-A-SCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPII 150 (366)
T ss_pred HHHHHHHH----HHHhhhHHHHHHHHHHHHHhchhh-H-hHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 11111111 111202344555666677765433 3 35778889999999999999999888999999988888777
Q ss_pred HH
Q 010744 430 EK 431 (502)
Q Consensus 430 ~~ 431 (502)
+.
T Consensus 151 ~~ 152 (366)
T TIGR00886 151 GS 152 (366)
T ss_pred HH
Confidence 64
No 205
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.12 E-value=1.8e-10 Score=115.63 Aligned_cols=140 Identities=14% Similarity=0.046 Sum_probs=105.9
Q ss_pred HhhhhhhhhH-HHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHH
Q 010744 279 IVGSLPWTAM-VFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFL 357 (502)
Q Consensus 279 ~~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (502)
+......... ...|.+.+++|.+..+.+++.+...++..++.++.|++.||+|||+.. ..+..+.. +.
T Consensus 12 ~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~-------~~~~~~~~----~~ 80 (485)
T TIGR00711 12 FMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLF-------LISTFAFT----LG 80 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHH-------HHHHHHHH----HH
Confidence 3333333444 567888888999999999999999999999999999999999999742 11121111 11
Q ss_pred hhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHH
Q 010744 358 LTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEK 431 (502)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~ 431 (502)
.......++ ...+.+..++.|++.+...+ ....++.|.+|+++|+++.++......++..++|.+.|++.++
T Consensus 81 ~~~~~~~~~-~~~l~~~~~~~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 152 (485)
T TIGR00711 81 SLLCGVAPN-LELMIIFRVIQGFGGGPLIP-LSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIEN 152 (485)
T ss_pred HHHHhCcCC-HHHHHHHHHHHHhhhhhHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccC
Confidence 111122222 44566777888888887776 6788999999999999999999999999999999999999886
No 206
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.11 E-value=4.2e-10 Score=107.79 Aligned_cols=132 Identities=12% Similarity=-0.053 Sum_probs=97.4
Q ss_pred HHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchh
Q 010744 289 VFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNY 368 (502)
Q Consensus 289 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (502)
..+|.+.+++|.|+.+.|++.+.+.++..++++..|++.||+|||+.. ........ .... ... ..+ ..
T Consensus 12 ~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~-------~~~~~~~~-~~~~-~~~--~~~-~~ 79 (368)
T TIGR00903 12 PVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFL-------FGSLATFA-AAAG-RLL--DPF-NY 79 (368)
T ss_pred hhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHH-------HHHHHHHH-HHHH-HHH--Hhc-cH
Confidence 457888888999999999999999999999999999999999987621 11111111 1111 111 111 34
Q ss_pred HHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcCC
Q 010744 369 YTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFGY 435 (502)
Q Consensus 369 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~ 435 (502)
..+.+.-++.|++.+...+ ......|.+|+++|++++++.+....+|..+++.+.+.+.+. .+|
T Consensus 80 ~~l~~~R~l~G~g~~~~~~--~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~-~gW 143 (368)
T TIGR00903 80 EWLLACQLLAALGQPFLLN--AFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTA-GGL 143 (368)
T ss_pred HHHHHHHHHHHhHhHHHHH--HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cch
Confidence 5566777788888775433 455568889999999999999999999999999999998876 444
No 207
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.09 E-value=3.3e-08 Score=93.03 Aligned_cols=326 Identities=12% Similarity=0.003 Sum_probs=183.9
Q ss_pred chHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhc
Q 010744 78 LGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADS 157 (502)
Q Consensus 78 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 157 (502)
.+.+.-+-.+...+..+.+.++.+|+..+.=+....++.+++.++.++++|.+.=+++-++.+++.|........+.. .
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~ 139 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-F 139 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-h
Confidence 344666666777788888889999988776677777788899999999999999999999999999988888877654 5
Q ss_pred cCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCC-
Q 010744 158 YKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGE- 236 (502)
Q Consensus 158 ~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 236 (502)
+++ ..++-++++.+.+.++|+..-..+... ..+-|..+++...+.++..+..++..++|+........+++
T Consensus 140 y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~~----g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~ 211 (402)
T PF02487_consen 140 YGK----SSLSAWSSGTGGAGLVGALYYLGLTTL----GLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESED 211 (402)
T ss_pred cCc----cccccccCCcChhhHHHHHHHHHHHHh----CcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCC
Confidence 543 457888888888888888766555542 14558888888877777766666666655433222111111
Q ss_pred --CCchhhHhh---hcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHh-hhhhhhhH-HHHHHHHH-HhCCC-hhhHHH
Q 010744 237 --NFDRDELVE---KGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIV-GSLPWTAM-VFFTMWFE-LIGFD-HSSTAA 307 (502)
Q Consensus 237 --~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~-~~g~s-~~~~~~ 307 (502)
+.+....+. +.+...+..+++..+..+.++ + .++-.+. ..+-|... ...|...- .-..+ ..+..+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~Ll-----~-ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~ 285 (402)
T PF02487_consen 212 EAEDDLLESETSESKPDSSSKLSFKEKLKRLKPLL-----W-YMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRW 285 (402)
T ss_pred cccccccccccccccccccchhhHHHHHHHHHHHH-----H-HHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHH
Confidence 111000000 001111222223233222221 1 2222221 22222222 23333321 11122 234455
Q ss_pred HHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhcc
Q 010744 308 LLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNAT 387 (502)
Q Consensus 308 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 387 (502)
....+.++.++++--...+ |+ |+. +...+...+-+.+..+ -..+... ++.+.+.+.++.-|+..|..+.
T Consensus 286 Y~~~YQ~GVFISRSS~~~~--ri--r~l-----wils~LQ~~nl~~~~l-~s~~~fi-psi~ivf~lif~eGLlGGa~YV 354 (402)
T PF02487_consen 286 YQLLYQLGVFISRSSLPFF--RI--RRL-----WILSLLQVINLVFLLL-QSWYRFI-PSIWIVFVLIFYEGLLGGASYV 354 (402)
T ss_pred HHHHHHHHHhhhhcceeee--eh--hhH-----HHHHHHHHHHHHHHHH-HHHHHHh-hHHHHHHHHHHHHHHhhhHHHH
Confidence 5666777777776543322 22 221 1211111111111100 0011112 2345566777778887777777
Q ss_pred CCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHH
Q 010744 388 AANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSE 430 (502)
Q Consensus 388 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~ 430 (502)
.....+.|-.|+++|..++|.....-.+|-.++..++-.+-.
T Consensus 355 -NtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le~ 396 (402)
T PF02487_consen 355 -NTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLEP 396 (402)
T ss_pred -HHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 456666777888999999999987777776666665544433
No 208
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.09 E-value=1.4e-09 Score=120.66 Aligned_cols=151 Identities=11% Similarity=0.031 Sum_probs=123.7
Q ss_pred hhHHHHH-hhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhh--------------
Q 010744 62 SVYKEVS-EAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGAS-------------- 126 (502)
Q Consensus 62 ~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-------------- 126 (502)
...|.+. +.+|.++.+.|++.+.+.++..+++++.|+++|+.++++.+..+.++.+++.+..++.
T Consensus 246 ~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 325 (1140)
T PRK06814 246 SQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSI 325 (1140)
T ss_pred HHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccch
Confidence 3455554 5589999999999999999999999999999999888887777776666666555443
Q ss_pred ------hHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccch
Q 010744 127 ------QHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWR 200 (502)
Q Consensus 127 ------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr 200 (502)
++.+.+++..++.|++.+...+...+++.+.+|+++||+++|..+....+|..+++++.+.+... ..++.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~----~~~~~ 401 (1140)
T PRK06814 326 LVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQAL----GFSIP 401 (1140)
T ss_pred hhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHh----ccCHH
Confidence 67788888899999999999999999999999999999999999999999999999999988743 15677
Q ss_pred HHHHHHHHHHHHHHHH
Q 010744 201 CAFILMATLSVLIAFL 216 (502)
Q Consensus 201 ~~f~~~~~~~~~~~~~ 216 (502)
..+++.+++.++..++
T Consensus 402 ~~~~~~~~~~~~~~~~ 417 (1140)
T PRK06814 402 WIILFIALANLIVAIL 417 (1140)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7777666554444433
No 209
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.08 E-value=5.5e-10 Score=108.21 Aligned_cols=131 Identities=14% Similarity=0.091 Sum_probs=100.1
Q ss_pred HHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchh
Q 010744 289 VFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNY 368 (502)
Q Consensus 289 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (502)
..+|.+.+++|.|+.+.++..+...++..++.++.|++.||+|||+.. ..+..+......... ..++ .
T Consensus 12 p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~-------~~~~~~~~i~~~~~~----~~~~-~ 79 (377)
T PRK11102 12 PALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVI-------LGGTLVFALAAVACA----LAQT-I 79 (377)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHH-------HHHHHHHHHHHHHHH----HHcc-H
Confidence 457788888999999999999999999999999999999999998732 122222111111111 1122 3
Q ss_pred HHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 369 YTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 369 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
+.+.+..++.|++.+...+ ....++.|.+|+++|+++.++.+....++..++|.+.+.+.+..
T Consensus 80 ~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 142 (377)
T PRK11102 80 DQLIYMRFLHGLAAAAASV-VINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF 142 (377)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4455667778888777666 57788999999999999999999999999999999999998864
No 210
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.05 E-value=1.3e-09 Score=109.28 Aligned_cols=141 Identities=16% Similarity=0.059 Sum_probs=101.2
Q ss_pred HhhhhhhhhH-HHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHH
Q 010744 279 IVGSLPWTAM-VFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFL 357 (502)
Q Consensus 279 ~~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (502)
+....-.+.. .-+|.+.+++|.+..+.++..+.+.++..+..+..|+++||+|||+.. ..+..+.......
T Consensus 16 ~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l-------~~~~~~~~~~~~~- 87 (495)
T PRK14995 16 IPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLL-------MLGGTLFGLASLA- 87 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH-------HHHHHHHHHHHHH-
Confidence 3333334444 457999889999999999999999999999999999999999999842 2222221111111
Q ss_pred hhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhccc-CCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 358 LTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVV-PAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
....++ .+.+.+.-++.|++.+...+ .....+.+.+ |+++|+++.|+......+|..+||.++|.+.++.
T Consensus 88 ---~~~a~~-~~~li~~r~l~G~g~~~~~~-~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~ 158 (495)
T PRK14995 88 ---AAFSPT-ASWLIATRALLAIGAAMIVP-ATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHF 158 (495)
T ss_pred ---HHHcCC-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 111223 44455666788888877666 4455554544 6789999999999999999999999999999873
No 211
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.05 E-value=1.7e-08 Score=97.54 Aligned_cols=185 Identities=14% Similarity=0.067 Sum_probs=141.3
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHH
Q 010744 38 GISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWA 117 (502)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 117 (502)
.|+.....+.+......-+.+........+-++-|++..+..++.........+..+++..+.||+|||+.++.+..++.
T Consensus 267 lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~ 346 (485)
T KOG0569|consen 267 LRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMA 346 (485)
T ss_pred hhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 34444344444333334444566666778889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh---hHHH------HHHHHHHHHhhhhhhh-hhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHH
Q 010744 118 FSTAAVGAS---QHFL------HVGMWRAVNGFGLAIV-IPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATI 187 (502)
Q Consensus 118 ~~~~~~~~~---~~~~------~l~~~r~l~G~~~~~~-~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~ 187 (502)
+..+++... .+.. ..+++.++..++.+.. .|...-+.+|.+|++.|..++++......+...+-...-..
T Consensus 347 ~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~ 426 (485)
T KOG0569|consen 347 VALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPP 426 (485)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988877663 1211 1234444444443433 47788889999999999999999999999888887777777
Q ss_pred HhhhcccCcccchHHHHHHHHHHHHHHHHHHHhccCCcccc
Q 010744 188 MAGHQFWGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKA 228 (502)
Q Consensus 188 l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (502)
+.+. .|= +.|++..+++.+..+..++..||++.+.
T Consensus 427 l~~~-----~g~-~~filF~i~~~~~~i~~~~~lPETkgr~ 461 (485)
T KOG0569|consen 427 LQNV-----IGP-YVFILFVIPLAIFLIYLYRYLPETKGRT 461 (485)
T ss_pred HHHH-----hcc-hhhHHHHHHHHHHHHHHHHhCcccCCCC
Confidence 7665 453 7888999999999999999998876543
No 212
>PRK11043 putative transporter; Provisional
Probab=99.03 E-value=2.9e-09 Score=104.02 Aligned_cols=129 Identities=19% Similarity=0.104 Sum_probs=93.5
Q ss_pred HHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHH
Q 010744 291 FTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYT 370 (502)
Q Consensus 291 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (502)
+|.+.+++|.++.+.++..+...++..++.++.|+++||+|||+.. ..+..+..... ......++ .+.
T Consensus 29 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~-------~~~~~~~~~~~----~~~~~~~~-~~~ 96 (401)
T PRK11043 29 FKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVL-------LAGLSLFALGS----LGMLWVES-AAQ 96 (401)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHH-------HHHHHHHHHHH----HHHHHhcC-HHH
Confidence 4445567999999999999999999999999999999999999842 11111111111 11111222 344
Q ss_pred HHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 371 YAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 371 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
+.+..++.|++.+...+ ....++.|.+|+++++...+..+....++..++|.+.+.+.+..
T Consensus 97 l~~~~~l~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~ 157 (401)
T PRK11043 97 LLVLRFVQAVGVCSAAV-IWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHF 157 (401)
T ss_pred HHHHHHHHHhhhHHHHH-HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 45556677777665554 45677889999888999999998888999999999999998874
No 213
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.03 E-value=2.1e-09 Score=104.84 Aligned_cols=131 Identities=8% Similarity=0.014 Sum_probs=96.1
Q ss_pred HHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchh
Q 010744 289 VFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNY 368 (502)
Q Consensus 289 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (502)
..+|.+.+++|.|+.+.++..+...++..++.++.|+++||+|||+.. ..+..+........ ...++ .
T Consensus 29 p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~-------~~~~~~~~~~~~~~----~~~~~-~ 96 (394)
T PRK11652 29 PAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVI-------LVGMSIFILGTLVA----LFAHS-L 96 (394)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH-------HHHHHHHHHHHHHH----HHHcc-H
Confidence 346777888999999999999999999999999999999999999842 11121111111111 11122 3
Q ss_pred HHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 369 YTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 369 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
+.+.+..++.|++.+...+ ....+..|.+++++++.+++..+....++..++|.+.+.+.+..
T Consensus 97 ~~l~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~ 159 (394)
T PRK11652 97 TVLIAASAIQGLGTGVGGV-MARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLF 159 (394)
T ss_pred HHHHHHHHHHHhhhhHHHH-HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4455666777777665555 55667788888889999999999888889999999999988763
No 214
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.03 E-value=1.9e-09 Score=103.51 Aligned_cols=118 Identities=11% Similarity=0.072 Sum_probs=99.3
Q ss_pred hhchhhHHHHHhhcCCCCCCchHHHHHHH-HHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhh----------
Q 010744 58 NLLPSVYKEVSEAFNAGPSDLGYLTFIRN-FVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGAS---------- 126 (502)
Q Consensus 58 ~~~~~~~~~i~~~~~~s~~~~g~~~s~~~-~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---------- 126 (502)
.......|.+.+++|.+.++.+.+.++.. ++..++.+++|++.||+|||+.+..+.++.+++..+..+.
T Consensus 226 ~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (356)
T TIGR00901 226 SAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGIT 305 (356)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccc
Confidence 34445566666679999999998888766 5778999999999999999999999988888877766553
Q ss_pred -hHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHh
Q 010744 127 -QHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGT 175 (502)
Q Consensus 127 -~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 175 (502)
++.+.+..+.++.+++.+...+...+++.|.+|+++||+.+|+.++..+
T Consensus 306 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 306 FPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 4567788889999999999999999999999999999999999987654
No 215
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.02 E-value=9.9e-09 Score=89.31 Aligned_cols=178 Identities=15% Similarity=0.121 Sum_probs=126.9
Q ss_pred hHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHH
Q 010744 39 ISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAF 118 (502)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 118 (502)
..+.+.++|+++.+..+.....++ -.+.+.||+|+...+.+.+....-.++.+++.|.++||+|++...+.+..+..+
T Consensus 265 pfw~~~iicv~yyva~fPFi~lg~--~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl 342 (459)
T KOG4686|consen 265 PFWVLVIICVLYYVAWFPFITLGP--MFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTL 342 (459)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhH--HHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHH
Confidence 345556666666665555433333 357899999999999999999999999999999999999999877766555444
Q ss_pred H-HHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcc
Q 010744 119 S-TAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVP 197 (502)
Q Consensus 119 ~-~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~ 197 (502)
. -....| +++.=.++..+.|+..+...-.....++-..|+++.|++.|..+...++|..+.|++++.+.+.. +.+
T Consensus 343 ~~H~~l~F--t~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~--g~y 418 (459)
T KOG4686|consen 343 LGHSGLFF--TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGD--GSY 418 (459)
T ss_pred HHhhhHHh--hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCC--Cch
Confidence 3 333333 22223455677888877666666777888899999999999999999999999999999998762 114
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhcc
Q 010744 198 GWRCAFILMATLSVLIAFLVLVFVV 222 (502)
Q Consensus 198 ~wr~~f~~~~~~~~~~~~~~~~~~~ 222 (502)
.|--.|.+......+..+..++...
T Consensus 419 ~~le~ffl~~~~~aL~svgil~~~N 443 (459)
T KOG4686|consen 419 DNLEAFFLIIGLMALTSVGILFYLN 443 (459)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhee
Confidence 4555555544444444444444443
No 216
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.01 E-value=3.4e-09 Score=103.29 Aligned_cols=148 Identities=14% Similarity=0.108 Sum_probs=107.6
Q ss_pred HHHHHHhhhhhhhhH-HHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhh
Q 010744 274 IVLQGIVGSLPWTAM-VFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIP 352 (502)
Q Consensus 274 ~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 352 (502)
....++......+.. ...|.+.+++|.+..+.|++.+...++..++++..|++.||+|+|+.. ..+..+...
T Consensus 8 ~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~-------~~g~~l~~~ 80 (410)
T TIGR00885 8 ITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGI-------LLGLFLYAL 80 (410)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH-------HHHHHHHHH
Confidence 333333333444444 567877777999999999999999999999999999999999999842 222222111
Q ss_pred HHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHH
Q 010744 353 FSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEK 431 (502)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~ 431 (502)
.. ....... ..++++.+.+..++.|++.+...+ ..+.++.+..|++++++..++.+...++|..++|.+.+.+...
T Consensus 81 g~-~l~~~~~-~~~~~~~~l~~~~l~G~g~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~ 156 (410)
T TIGR00885 81 GA-FLFWPAA-EIMNYTLFLVGLFILTAGLGFLET-AANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILS 156 (410)
T ss_pred HH-HHHHHHH-hhccHHHHHHHHHHHHhhHHHHHh-hhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11 1111111 122345566777888999888877 6778888888999999999999999999999999999988754
No 217
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=99.01 E-value=9.8e-09 Score=96.36 Aligned_cols=162 Identities=27% Similarity=0.411 Sum_probs=133.5
Q ss_pred HHHHHHHhhhhchhhHHHHHhhcCCCC--CCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhh
Q 010744 49 AAIMERADENLLPSVYKEVSEAFNAGP--SDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGAS 126 (502)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~i~~~~~~s~--~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 126 (502)
..+....+........+.+..+++.+. .+.++..+.+.++..++.++.|++.||+|||+.+..+.....++.++.++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 89 (338)
T COG0477 10 AALLLGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALA 89 (338)
T ss_pred HHHHHHHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhC
Confidence 334444666677778888888888666 489999999999999999999999999999998888887766667777777
Q ss_pred hH--HHHHHHHHHHHhhhhhhhhhhhHHHHhhccCC-CCcchhhhHHHH-HHhhhhhHHHHHHHHHhhhcccCcccchHH
Q 010744 127 QH--FLHVGMWRAVNGFGLAIVIPALQSFIADSYKD-GVRGAGFGLLSL-VGTMGGIGGGVLATIMAGHQFWGVPGWRCA 202 (502)
Q Consensus 127 ~~--~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~ 202 (502)
.+ .+.+++.|+++|++.+...+...+++.|++|+ ++|+...+.... ...+|..+++.+++.+... ...+||+.
T Consensus 90 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 166 (338)
T COG0477 90 PNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA---LLWGWRAA 166 (338)
T ss_pred ccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcchHHH
Confidence 66 89999999999999999999999999999977 689999999988 5888999999888777653 33689997
Q ss_pred HHHHHHHHHHH
Q 010744 203 FILMATLSVLI 213 (502)
Q Consensus 203 f~~~~~~~~~~ 213 (502)
|.+........
T Consensus 167 ~~~~~~~~~~~ 177 (338)
T COG0477 167 FLLAALLGLLL 177 (338)
T ss_pred HHHHHHHHHHH
Confidence 77766655444
No 218
>PRK10133 L-fucose transporter; Provisional
Probab=99.00 E-value=1.1e-08 Score=100.62 Aligned_cols=142 Identities=11% Similarity=-0.044 Sum_probs=114.5
Q ss_pred HhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhh
Q 010744 68 SEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNGFGLAIVI 147 (502)
Q Consensus 68 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 147 (502)
++.+|.++.+.++....+.++..++.++.|++.||+|+|+++..+.++.+++.++..+.++.+. +..-.+.|++.+..+
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~glg~~~i~ 365 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVG-LIALTLCSAFMSIQY 365 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999999999999998888777777666655432 455678999999999
Q ss_pred hhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCccc-chHHHHHHHHHHHHHHHHH
Q 010744 148 PALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPG-WRCAFILMATLSVLIAFLV 217 (502)
Q Consensus 148 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~-wr~~f~~~~~~~~~~~~~~ 217 (502)
|...+...+.++ ++.+.+.++... ..+|..++|.+.+.+.+. .| -|..|++..+..+......
T Consensus 366 P~~~s~a~~~~~-~~~~~as~l~~~-~~~g~~~~~~i~G~l~~~-----~g~~~~~~~v~~~~~~~~~~~~ 429 (438)
T PRK10133 366 PTIFSLGIKNLG-QDTKYGSSFIVM-TIIGGGIVTPVMGFVSDA-----AGNIPTAELIPALCFAVIFIFA 429 (438)
T ss_pred HHHHHHHHcccc-hhhccchhHHhH-HhccchHHHHHHHHHHHh-----ccchHHHHHHHHHHHHHHHHHH
Confidence 999999999885 456788888864 447888889999998886 66 7888877655544444433
No 219
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.00 E-value=2.9e-06 Score=82.58 Aligned_cols=277 Identities=9% Similarity=0.046 Sum_probs=166.5
Q ss_pred HHHHHHHHHHHHHHhhhhchhhHHHHHhhcCC-----CCCCchHHHHHHHHHHhhh-cchhhhhhhhcCCchhHHHHHHH
Q 010744 42 SLILINLAAIMERADENLLPSVYKEVSEAFNA-----GPSDLGYLTFIRNFVQGLS-SPLAGVLVINYDRPAVLTIGILC 115 (502)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----s~~~~g~~~s~~~~~~~~~-~~~~G~l~dr~Grr~~l~~~~~~ 115 (502)
.+..+.+..|+..++.+ ++-.+.+.+.. +.+.+.++.+...+..++. .++.+++++|++|++++-+....
T Consensus 8 k~~~~~l~fF~il~~Y~----iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~ 83 (472)
T TIGR00769 8 KFLPLFLMFFCILFNYT----ILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISP 83 (472)
T ss_pred HHHHHHHHHHHHHHHHH----HHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHH
Confidence 33444444444444433 34556666655 3357889999888877777 89999999999999999888888
Q ss_pred HHHHHHHHHhh----h---------------------------HHHHHHHHHHHHhhhhhhhhh-hhHHHHhhccCCCCc
Q 010744 116 WAFSTAAVGAS----Q---------------------------HFLHVGMWRAVNGFGLAIVIP-ALQSFIADSYKDGVR 163 (502)
Q Consensus 116 ~~~~~~~~~~~----~---------------------------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r 163 (502)
+....+++++. + +.|...+.-+...+-.....+ .-..+.+|.++.+|-
T Consensus 84 F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qa 163 (472)
T TIGR00769 84 FLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEA 163 (472)
T ss_pred HHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 88877777764 1 133344445555555555555 778899999999999
Q ss_pred chhhhHHHHHHhhhhhHHHHHHHHHhhhcc---cCcccch----HHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCC
Q 010744 164 GAGFGLLSLVGTMGGIGGGVLATIMAGHQF---WGVPGWR----CAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGE 236 (502)
Q Consensus 164 ~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~---~~~~~wr----~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (502)
.|..+++..+.++|.++++.+..++.+... .+...|. ..+.+.++.+.+...+.+++-+.. .. +++.
T Consensus 164 kRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~-~~--~~~~--- 237 (472)
T TIGR00769 164 KRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNV-LT--DPRS--- 237 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cC--Cccc---
Confidence 999999999999999999999988874210 1123452 233444444333333333332221 11 1100
Q ss_pred CCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhhhhHHH-HHHHHHHhCCChhhH----HHHHHH
Q 010744 237 NFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLPWTAMVF-FTMWFELIGFDHSST----AALLSL 311 (502)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~----~~~~~~ 311 (502)
.+.++ .++++ ++.....+..+.++++|.++.+.+...+.........+ .-..+++..-++.+- |.+...
T Consensus 238 -~~~~~--~~~k~---k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~ 311 (472)
T TIGR00769 238 -YNPAL--KEKKV---KPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTW 311 (472)
T ss_pred -cchhh--ccccC---CCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 00000 00111 11223456777889999888777776666555444422 222333322333332 333344
Q ss_pred HHhhhcccccchhhhhhhhcccc
Q 010744 312 FAIGCAVGSFLGGVVADRISQAY 334 (502)
Q Consensus 312 ~~~~~~~~~~~~g~l~d~~g~~~ 334 (502)
.++..++.+++.+++.+|+|-+.
T Consensus 312 ~gi~tl~~~l~~~~l~~~~Gw~~ 334 (472)
T TIGR00769 312 TGVVSVTMMLLSGNVIRKYGWLT 334 (472)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHH
Confidence 45555566666689999998765
No 220
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.97 E-value=1.9e-10 Score=107.28 Aligned_cols=153 Identities=13% Similarity=0.108 Sum_probs=116.8
Q ss_pred HhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHH
Q 010744 297 LIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLV 376 (502)
Q Consensus 297 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (502)
.++.++...|++...+.+..++..++.|++.||+.|++.+. .+..+-.+..+..... ...+.+.+.=.
T Consensus 62 ~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~-----------vG~~iW~~Av~~~~fs-~~Fwq~~l~R~ 129 (493)
T KOG1330|consen 62 YFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIA-----------VGIFIWTLAVFASGFS-NHFWQVLLCRG 129 (493)
T ss_pred hcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEe-----------eHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 38999999999999999999999999999999999998532 1111111111111112 44666778888
Q ss_pred HHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcCCCCCCCCCCCCChhhHHHHHHH
Q 010744 377 LMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFGYDSKAIDPVMGSPREALALSRG 456 (502)
Q Consensus 377 ~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (502)
+.|+|.+...+ +..++++|.+|.++|+++.++.+.....|..+|-..++.+.+..+.| +++
T Consensus 130 ~vGiGeAs~~~-ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~W------------------r~a 190 (493)
T KOG1330|consen 130 FVGIGEASYSP-IAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWW------------------RWA 190 (493)
T ss_pred Hhccchhhhcc-cchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccce------------------EEE
Confidence 99999999888 89999999999999999999999999999999999988888887655 366
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhh
Q 010744 457 LLSMMAVPFGLCCLFYTPLYKIFK 480 (502)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~ 480 (502)
+....++..+++++..++.+.+++
T Consensus 191 f~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 191 FRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred EEeehHHHHHHHHHHHhhccCccc
Confidence 666666655555555555554444
No 221
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.97 E-value=7.4e-08 Score=87.43 Aligned_cols=367 Identities=10% Similarity=0.029 Sum_probs=206.5
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhh-----hcCCchhH-HH
Q 010744 38 GISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVI-----NYDRPAVL-TI 111 (502)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d-----r~Grr~~l-~~ 111 (502)
.....+..+.+.+.+.+.-..... .+|.+.+.-|.|.++.+...-++. .+ .--+.|.++.| |+||||.. +-
T Consensus 28 ~d~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~-P~-sLKllWaPiVDs~y~k~~GrrksWvvp 104 (510)
T KOG3574|consen 28 GDRSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYW-PF-SLKLLWAPIVDSVYSKRFGRRKSWVVP 104 (510)
T ss_pred hhhhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhhh-HH-HHHHHHHhhhHHHHHHhhccccceeee
Confidence 334455566667777777777777 899999988888888776543322 11 22467888899 99999953 33
Q ss_pred HHHHHHHHHHHHHh-----------hhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhH
Q 010744 112 GILCWAFSTAAVGA-----------SQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIG 180 (502)
Q Consensus 112 ~~~~~~~~~~~~~~-----------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 180 (502)
+..+.+......+. .++...+...-++.-+..+....+.-.+.-.+..+++.|-+......+...|..+
T Consensus 105 ~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL 184 (510)
T KOG3574|consen 105 CQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFL 184 (510)
T ss_pred hHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHh
Confidence 33333333333332 2344444444556666667777777788888888999999988888888888877
Q ss_pred HHHHHHHHhhhcc--------c---CcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCC
Q 010744 181 GGVLATIMAGHQF--------W---GVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNT 249 (502)
Q Consensus 181 g~~~~~~l~~~~~--------~---~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (502)
+..+--.+.+... . +...-....++.+.+.++...+..+.-+|++....++
T Consensus 185 ~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~e------------------ 246 (510)
T KOG3574|consen 185 GNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVDEE------------------ 246 (510)
T ss_pred hcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhhhh------------------
Confidence 7655433332100 0 0011112334445555555555555555544331111
Q ss_pred CcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhhhhH-HHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhh
Q 010744 250 SVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLPWTAM-VFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVAD 328 (502)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d 328 (502)
.....++..+-.+++++-|............=..+... ...+.-+-|+|++.++.+++..+ .+..+++.++...
T Consensus 247 -~~~~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle~Gv~ke~Lal~~v~----~~plqI~l~~~~g 321 (510)
T KOG3574|consen 247 -LELGIHESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLEHGVPKEELALIAVP----LVPLQIALPLYIG 321 (510)
T ss_pred -hhcCHHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHHcCCChhHheeeeee----hhhHHHhhhhhhe
Confidence 11122444555666777777776666665555555555 55677777899998887766433 3333344444433
Q ss_pred hhcc--ccCCc-chhHHhhhhhhhhhhHHHHHhhhccCC-------cchhHHHHH-HHHHHHHHHhhhccCCCccchhcc
Q 010744 329 RISQ--AYPHS-GRVMCAQFSAFMGIPFSWFLLTAIPQS-------VSNYYTYAV-TLVLMGLTISWNATAANGPMFAEV 397 (502)
Q Consensus 329 ~~g~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~ 397 (502)
|+.. |+... .+....- ...+.....+.+ ..+.. +.....+.+ ...+.+......+. ..++..+++
T Consensus 322 k~ta~~~pl~~~lka~~~R--~~~~~~~t~Lv~-~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv-~~maf~aqi 397 (510)
T KOG3574|consen 322 KWTAGPRPLNVFLKAVPYR--LGGGLVQTALVW-WTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFV-SGMAFHAQI 397 (510)
T ss_pred eecCCCCcchHHHHhhhHH--HHHHHHHHHHHh-hhcccccCCCceeechHHHHHHHHHHhhhHHHHHHH-HHHHHHhhc
Confidence 3322 21111 0000111 111111111111 11111 111111111 12222222222222 356777888
Q ss_pred cCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcC
Q 010744 398 VPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFG 434 (502)
Q Consensus 398 ~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~ 434 (502)
.+|..-|+.+.+.|+..++|+.--..+..++.|...-
T Consensus 398 sdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv 434 (510)
T KOG3574|consen 398 SDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLTV 434 (510)
T ss_pred CCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCce
Confidence 9999999999999999999999888899999998543
No 222
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.97 E-value=2.7e-07 Score=93.97 Aligned_cols=158 Identities=13% Similarity=0.116 Sum_probs=126.9
Q ss_pred hhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhh-cCCchhHHHHHHHHHHHHHHHHhhhH--------HHHH
Q 010744 62 SVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVIN-YDRPAVLTIGILCWAFSTAAVGASQH--------FLHV 132 (502)
Q Consensus 62 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~--------~~~l 132 (502)
.+...+.+.+|.+.++...+...+....-+..+++|+++|+ +|+++.+.++.++..++.++.+++.. ....
T Consensus 9 iLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~ 88 (654)
T TIGR00926 9 ILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLD 88 (654)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHH
Confidence 34455666789998888888888888888999999999995 89999999999999999988877421 2335
Q ss_pred HHHHHHHhhhhhhhhhhhHHHHhhccCCC---CcchhhhHHHHHHhhhhhHHHHHHHHHhhhcc--cCcccchHHHHHHH
Q 010744 133 GMWRAVNGFGLAIVIPALQSFIADSYKDG---VRGAGFGLLSLVGTMGGIGGGVLATIMAGHQF--WGVPGWRCAFILMA 207 (502)
Q Consensus 133 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~--~~~~~wr~~f~~~~ 207 (502)
+++-.+..+|.|++-|+..+...|.++++ +|-..+.++..+.++|..+++.+..++.+... +...+|...|.+.+
T Consensus 89 l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~ 168 (654)
T TIGR00926 89 LLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPA 168 (654)
T ss_pred HHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHH
Confidence 67778889999999999999999999764 36778889999999999999999988864310 11247999999988
Q ss_pred HHHHHHHHHHHH
Q 010744 208 TLSVLIAFLVLV 219 (502)
Q Consensus 208 ~~~~~~~~~~~~ 219 (502)
+..++..++...
T Consensus 169 i~m~ia~lvf~~ 180 (654)
T TIGR00926 169 ILMILALIVFMA 180 (654)
T ss_pred HHHHHHHHHHHH
Confidence 887777666554
No 223
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.96 E-value=6e-09 Score=101.93 Aligned_cols=128 Identities=16% Similarity=0.057 Sum_probs=94.6
Q ss_pred HHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHH
Q 010744 291 FTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYT 370 (502)
Q Consensus 291 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (502)
+|.+.+++|.+..+.+...+.+.++..+++++.|+++||+|||+.. ..+..+..... ......++ ...
T Consensus 39 l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l-------~~~~~~~~~~~----~~~~~a~~-~~~ 106 (413)
T PRK15403 39 IINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVL-------ITGALIFTLAC----AATLFTTS-MTQ 106 (413)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHH-------HHHHHHHHHHH----HHHHHcCC-HHH
Confidence 4555667999999999999999999999999999999999999842 11111111111 11111222 344
Q ss_pred HHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHH
Q 010744 371 YAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEK 431 (502)
Q Consensus 371 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~ 431 (502)
+.+.-++.|++.+...+ ....++.|.+|++++++++++.+....++..++|.+++.+.+.
T Consensus 107 l~~~r~l~Gi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~ 166 (413)
T PRK15403 107 FLIARFIQGTSICFIAT-VGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF 166 (413)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 55666777877765444 4567788999999999999999999999999999999988876
No 224
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.96 E-value=1.5e-08 Score=99.73 Aligned_cols=146 Identities=16% Similarity=0.115 Sum_probs=122.4
Q ss_pred HHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHh
Q 010744 46 INLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGA 125 (502)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 125 (502)
+.+..++............+.+.++.--++...+.+..+..++..++.+++++++||+|+|+++..+.++.+++.++..+
T Consensus 230 l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~ 309 (428)
T PF13347_consen 230 LLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFF 309 (428)
T ss_pred HHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHH
Confidence 44444555555555565666666654334477888889999999999999999999999999999999999999999988
Q ss_pred hh--HHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCC-------CCcchhhhHHHHHHhhhhhHHHHHHHHHhhh
Q 010744 126 SQ--HFLHVGMWRAVNGFGLAIVIPALQSFIADSYKD-------GVRGAGFGLLSLVGTMGGIGGGVLATIMAGH 191 (502)
Q Consensus 126 ~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~ 191 (502)
.+ |.+.+++.-++.|++.+...+...++++|..+. ++.|...+..+...-+|..+++.+.+.+.+.
T Consensus 310 ~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~ 384 (428)
T PF13347_consen 310 LGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLAL 384 (428)
T ss_pred HHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 86 999999999999999999999999999999863 4458889999999999999999999988765
No 225
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.96 E-value=5.7e-09 Score=94.24 Aligned_cols=134 Identities=15% Similarity=0.202 Sum_probs=107.5
Q ss_pred HHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcch
Q 010744 86 NFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGA 165 (502)
Q Consensus 86 ~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 165 (502)
.+.-.-|.++.+++.||+|||++|..+.+++++..++.-...+-....+.-+..-++.++.+.+.+.|..|.+|.+-|+.
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRat 470 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRAT 470 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhc
Confidence 45666788999999999999999999999999999888776554443333344444456667788999999999999999
Q ss_pred hhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHHHhccCCcc
Q 010744 166 GFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVLVFVVDPRK 226 (502)
Q Consensus 166 ~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~ 226 (502)
..|.-+...-+|.++.|+++ ...+ .+-..+..+.+.++++..+...++|-|++.
T Consensus 471 gvGtcSsmaRIggI~~p~iA-~~~e------~s~sl~i~vy~~~~ilagIavcffPiEtkG 524 (528)
T KOG0253|consen 471 GVGTCSSMARIGGIFSPVIA-MRAE------LSTSLPIFVYGALFILAGIAVCFFPIETKG 524 (528)
T ss_pred chhhhhhHHhhhhhhhhHHH-HHhc------cceeehHHHHHHHHHHHHHHheeeeeccCC
Confidence 99999999999999999999 3333 355567778888888888888888877654
No 226
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.92 E-value=1.4e-08 Score=99.19 Aligned_cols=137 Identities=12% Similarity=0.111 Sum_probs=92.5
Q ss_pred hhhH-HHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhh----hhccccCCcchhHHhhhhhhhhhhHHHHHhh
Q 010744 285 WTAM-VFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVAD----RISQAYPHSGRVMCAQFSAFMGIPFSWFLLT 359 (502)
Q Consensus 285 ~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (502)
+... .+++.|++++|.+....+.+.....+.+++..++.|+++| |+|||++. ...+.........+...
T Consensus 20 ~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~------il~g~~~~~~~l~ll~~ 93 (477)
T TIGR01301 20 WALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPF------IAAGAALVAFAVILIGF 93 (477)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHH------HHHHHHHHHHHHHHHHh
Confidence 4444 6788899999999999999999999999999999999999 59999853 11111111111111111
Q ss_pred hcc----------CCcchh--HHHHHHHHHHHHHHhhhccCCCccchhcccCCCch--hhHHHHHHHhhhhhhhhhHHHH
Q 010744 360 AIP----------QSVSNY--YTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHR--TMIYAFDRAFEGSFSSFAAPLV 425 (502)
Q Consensus 360 ~~~----------~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~--~~~~g~~~~~~~~~~~~~~~~~ 425 (502)
... .....+ +...+.+.+..++.+...+ ...+++.|..|+++| +.++++.+...++|+.+++.++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~-p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g 172 (477)
T TIGR01301 94 AADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQG-PCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAG 172 (477)
T ss_pred CchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHH-HHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 000011 2233334444556665555 367899999998765 6799999999999999999988
Q ss_pred HHH
Q 010744 426 GIL 428 (502)
Q Consensus 426 g~l 428 (502)
+..
T Consensus 173 ~~~ 175 (477)
T TIGR01301 173 AYS 175 (477)
T ss_pred HHH
Confidence 875
No 227
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.92 E-value=1.5e-09 Score=98.54 Aligned_cols=119 Identities=17% Similarity=0.063 Sum_probs=89.5
Q ss_pred hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHH
Q 010744 298 IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVL 377 (502)
Q Consensus 298 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (502)
.+-+..-+|++-+.+.+...+.++.+|.++||+|||.. +.+|.....+.+.......+ ...+.+.=++
T Consensus 63 ~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpv-----------ll~c~~~va~s~ll~~~S~~-F~afv~aR~l 130 (451)
T KOG2615|consen 63 DGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPV-----------LLACLIGVALSYLLWALSRN-FAAFVLARFL 130 (451)
T ss_pred ccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHH-----------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHh
Confidence 34456778999999999999999999999999999974 12222222222222222222 3334444667
Q ss_pred HHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHH
Q 010744 378 MGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSE 430 (502)
Q Consensus 378 ~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~ 430 (502)
.|+..+-... ..++++|++++++|+.+++.+++...+|-.+||.++|++.+
T Consensus 131 ~Gi~kgnl~v--~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 131 GGIFKGNLSV--IRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred hhhccCchHH--HHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 7877766554 78999999999999999999999999999999999999988
No 228
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.91 E-value=1.8e-08 Score=100.54 Aligned_cols=176 Identities=19% Similarity=0.152 Sum_probs=115.1
Q ss_pred HHHHHHHHHHHHHhhhhchhhHHHH-HhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhH--------HHHH
Q 010744 43 LILINLAAIMERADENLLPSVYKEV-SEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVL--------TIGI 113 (502)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l--------~~~~ 113 (502)
+...++..+............+|.+ .+++|.+..+.+++.++..++..++.++.|+++||+++|+.. ..+.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 342 (465)
T TIGR00894 263 VWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGI 342 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 4444555555555444555556655 466899999999999999999999999999999998755321 1111
Q ss_pred HHH--HHHHHHHHh-hhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhh
Q 010744 114 LCW--AFSTAAVGA-SQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAG 190 (502)
Q Consensus 114 ~~~--~~~~~~~~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 190 (502)
... ++..+.... ..+....++.-.+.+.+.+...+.......|.. ++.+|.+.++.+....+|..++|.+.+.+.+
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~ 421 (465)
T TIGR00894 343 GGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLA-PRFLGFIKGITGLPGFIGGLIASTLAGNILS 421 (465)
T ss_pred HHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcC-hhHHHHHHHHHHHHHHHHHHHHHHhhheeeC
Confidence 111 111111111 233444444445555555555555545556666 4589999999999999999999999998876
Q ss_pred hcccCcccchHHHHHHHHHHHHHHHHHHHhc
Q 010744 191 HQFWGVPGWRCAFILMATLSVLIAFLVLVFV 221 (502)
Q Consensus 191 ~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 221 (502)
.. +..+|+..|.+.++..++..++..+..
T Consensus 422 ~~--~~~~~~~~f~~~~~~~~i~~i~~~~~~ 450 (465)
T TIGR00894 422 QD--SKNVWLIVFLIMAFVNILCVIFYLIFG 450 (465)
T ss_pred CC--CchHHHHHHHHHHHHHHHHHHHeeeee
Confidence 41 113489999998887777666555443
No 229
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.91 E-value=2.6e-08 Score=85.94 Aligned_cols=319 Identities=14% Similarity=0.112 Sum_probs=168.0
Q ss_pred hchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 010744 59 LLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAV 138 (502)
Q Consensus 59 ~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 138 (502)
.-+|.+-.+-..++....++|.+.-...-..++...+.|.++|+-|||+.-+.-.+.+.++++ .-.++.|-.++++|++
T Consensus 55 LQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~L 133 (454)
T KOG4332|consen 55 LQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRVL 133 (454)
T ss_pred hcCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeehhhh
Confidence 345555566678899999999998888888888889999999999999976554444443332 3346889999999999
Q ss_pred HhhhhhhhhhhhHHH-HhhccCCCCcchhhhHHH--------HHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHH
Q 010744 139 NGFGLAIVIPALQSF-IADSYKDGVRGAGFGLLS--------LVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATL 209 (502)
Q Consensus 139 ~G~~~~~~~~~~~~~-i~~~~~~~~r~~~~~~~~--------~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~ 209 (502)
-|+..+..+.+..++ +.|.. ++|+.---+.. .+..+=.+++.+.+..+.+..+ .|--.+|-..+.+
T Consensus 134 GGiaTsLLFSaFEsWliaEHn--ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~s---lGPVAPFdAAacf 208 (454)
T KOG4332|consen 134 GGIATSLLFSAFESWLIAEHN--EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFS---LGPVAPFDAAACF 208 (454)
T ss_pred hhHHHHHHHHHHHHHHHHHhh--hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhc---cCCCCchHHHHHH
Confidence 999999999888775 56665 34443333322 2333344555555555555411 2333444433322
Q ss_pred HHHHHHHHHHhccCCccccCCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHH-HHHHhhhhhhhhH
Q 010744 210 SVLIAFLVLVFVVDPRKKASTFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIV-LQGIVGSLPWTAM 288 (502)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 288 (502)
..+...+.+. .|.+..+++.| .+.-..+.....+.+..++++.++- +...+-...+...
T Consensus 209 LaigmAvil~-----~W~ENygdps~---------------~kdlltqf~gaa~aiaSD~ki~LLG~iqsLFE~smytFV 268 (454)
T KOG4332|consen 209 LAIGMAVILS-----SWSENYGDPSE---------------NKDLLTQFKGAARAIASDEKIALLGAIQSLFEGSMYTFV 268 (454)
T ss_pred HHHHHHHHHh-----hhhhccCChhh---------------hHHHHHHhhHhHHHHhcchHHHHHHHHHHHHhhhhheee
Confidence 2221111111 11111110000 0011122223334455555544433 2222222222222
Q ss_pred -HHHHHHHH-HhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhh--ccCC
Q 010744 289 -VFFTMWFE-LIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTA--IPQS 364 (502)
Q Consensus 289 -~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 364 (502)
.|.|..-- +.+.+ -|.+++-+.+..++|+-+..++..|-..|-.- ...+...+... ...+.... ....
T Consensus 269 FLWTPaLspn~e~iP---hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~----ymqivf~vs~a-~l~Lpilt~~vsP~ 340 (454)
T KOG4332|consen 269 FLWTPALSPNDEEIP---HGFIFATFMLASMLGSSLASRLLSRSSPKVES----YMQIVFLVSIA-ALLLPILTSSVSPS 340 (454)
T ss_pred eeecccCCCCcccCC---chhHHHHHHHHHHHhhHHHHHHHhcCCcccch----HHHHHHHHHHH-HHHHHHHHhccCCC
Confidence 34554321 12222 36677777778888877776666654443321 11111111111 11111111 1111
Q ss_pred cchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHH
Q 010744 365 VSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRA 412 (502)
Q Consensus 365 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~ 412 (502)
......-.+.+.++-...|...| .++-+-.+..|.+.|++.+-....
T Consensus 341 kes~~~s~i~F~~~E~cvGlfwP-SimkmRsqyIPEearstimNfFRv 387 (454)
T KOG4332|consen 341 KESPSESLIGFCLFEACVGLFWP-SIMKMRSQYIPEEARSTIMNFFRV 387 (454)
T ss_pred cCCchHHHHHHHHHHHHHhhcch-HHHHHHHhhCCHHHHhhhhhheec
Confidence 22233334455555566677777 566677788898888776655543
No 230
>PRK09848 glucuronide transporter; Provisional
Probab=98.90 E-value=5.6e-09 Score=103.53 Aligned_cols=130 Identities=15% Similarity=0.111 Sum_probs=103.5
Q ss_pred hhHHHH-HhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHH
Q 010744 62 SVYKEV-SEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGAS--QHFLHVGMWRAV 138 (502)
Q Consensus 62 ~~~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l 138 (502)
...|.+ .+.+|.++...++......++..++.++++++.||+|+|+++.++.++.+++.++..+. ++++.+++..++
T Consensus 249 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l 328 (448)
T PRK09848 249 ASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAI 328 (448)
T ss_pred hhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHH
Confidence 334443 33466555444444444467788899999999999999999999999988888777764 367777778889
Q ss_pred HhhhhhhhhhhhHHHHhhccCCC-------CcchhhhHHHHHHhhhhhHHHHHHHHHhhh
Q 010744 139 NGFGLAIVIPALQSFIADSYKDG-------VRGAGFGLLSLVGTMGGIGGGVLATIMAGH 191 (502)
Q Consensus 139 ~G~~~~~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~ 191 (502)
.|+|.+...+...++..|..|.+ ++|...++.+....+|..+|+.+.+.+.+.
T Consensus 329 ~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~ 388 (448)
T PRK09848 329 ASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGL 388 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988654 458999999999999999999999988765
No 231
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.88 E-value=2.1e-08 Score=95.59 Aligned_cols=126 Identities=13% Similarity=0.095 Sum_probs=97.5
Q ss_pred HHHHHHHHhCCChhh-HHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchh
Q 010744 290 FFTMWFELIGFDHSS-TAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNY 368 (502)
Q Consensus 290 ~~~~~~~~~g~s~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (502)
..|.+.+++|++..+ .|.+.+.+..+..+..+.+|+++||+|.|+.+ ..+.+.-.++..+.. .. ...
T Consensus 48 a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL-------~l~~l~Wsl~t~L~~----fa-~Sl 115 (511)
T TIGR00806 48 ITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVL-------VLQALSFVCVWLLLL----LG-TSV 115 (511)
T ss_pred HHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHH-------HHHHHHHHHHHHHHH----HH-HHH
Confidence 345555679999999 99999999999999999999999999999842 111111111111111 11 235
Q ss_pred HHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHH
Q 010744 369 YTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILS 429 (502)
Q Consensus 369 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~ 429 (502)
..+.+.-+++|++.+... ....++.+.+|+++|++++|+.+....+|.++++++.+.+.
T Consensus 116 ~~L~i~R~llGvaEA~~~--A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~ 174 (511)
T TIGR00806 116 WHMQLMEVFYSVTMAARI--AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV 174 (511)
T ss_pred HHHHHHHHHHHHHHHHHH--HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567788889999988877 37888999999999999999999999999999999999944
No 232
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.87 E-value=1.3e-08 Score=104.19 Aligned_cols=145 Identities=8% Similarity=0.012 Sum_probs=105.6
Q ss_pred HHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHh-----------
Q 010744 290 FFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLL----------- 358 (502)
Q Consensus 290 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 358 (502)
.++.+-++++++..+.|++.+.+.++..++.++.+++.||.+||+.+.....+..++.++....-.+.-
T Consensus 55 ~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~ 134 (633)
T TIGR00805 55 SLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSST 134 (633)
T ss_pred hchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccc
Confidence 356665679999999999999999999999999999999999998654333332222222111000000
Q ss_pred ---------hhccC-----------------C--cchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHH
Q 010744 359 ---------TAIPQ-----------------S--VSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFD 410 (502)
Q Consensus 359 ---------~~~~~-----------------~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~ 410 (502)
..... . ...+..+++.-++.|++.+...+ ...+++.|.+|+++|+...|+.
T Consensus 135 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~-~~~~~i~d~~~~~~~~~~~~i~ 213 (633)
T TIGR00805 135 GNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFP-LGISYIDDFAKSKNSPLYIGIL 213 (633)
T ss_pred ccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchh-cCchhhhccCCccccHHHHHHH
Confidence 00000 0 11244566788899999888888 7889999999999999999999
Q ss_pred HHhhhhhhhhhHHHHHHHHHHhcCC
Q 010744 411 RAFEGSFSSFAAPLVGILSEKMFGY 435 (502)
Q Consensus 411 ~~~~~~~~~~~~~~~g~l~~~~~~~ 435 (502)
+....+|..+|+.++|.+.+...++
T Consensus 214 ~~~~~iG~~lG~llgg~l~~~~~d~ 238 (633)
T TIGR00805 214 ESIAVFGPAFGYLLGSFCLQIYVDT 238 (633)
T ss_pred HHHHHhhhHHHHHHHHHHHhccccc
Confidence 9999999999999999998765444
No 233
>PTZ00207 hypothetical protein; Provisional
Probab=98.85 E-value=3.1e-08 Score=98.93 Aligned_cols=132 Identities=11% Similarity=-0.026 Sum_probs=84.6
Q ss_pred HHHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhcc-CCcc
Q 010744 288 MVFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIP-QSVS 366 (502)
Q Consensus 288 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 366 (502)
..+.|...+++|+|..+.+.+.+..... ....+..|++.||+|+|+. ..++.++......+..+... ....
T Consensus 47 sv~s~~L~~~lgls~~~l~~i~svg~~~-g~~~lp~G~L~Dr~G~R~v-------llig~ll~~iG~ll~ala~~~~i~~ 118 (591)
T PTZ00207 47 NLISGAMQARYNLTQRDLSTITTVGIAV-GYFLLPYSFIYDYLGPRPI-------FVLSMTVFCLGTLLFALTFQEVIEG 118 (591)
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcHHH-------HHHHHHHHHHHHHHHHHHhcccccC
Confidence 3556766667999999998887664333 3456678999999999974 22222222222212111111 1112
Q ss_pred hhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhh-hHHHHHHHH
Q 010744 367 NYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSF-AAPLVGILS 429 (502)
Q Consensus 367 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~-~~~~~g~l~ 429 (502)
+.+.+.+..++.|++.+...+ .....+.+.+| ++||.+.|+......+|+++ ++...+.+.
T Consensus 119 s~~~l~l~r~l~G~G~~~~~~-~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~ 180 (591)
T PTZ00207 119 SVVRLSVYNGLMTLGCMLFDL-GAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS 180 (591)
T ss_pred cHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355566677788888776665 45566777787 78999999999999999985 444444443
No 234
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.84 E-value=2.2e-08 Score=99.23 Aligned_cols=155 Identities=14% Similarity=0.096 Sum_probs=122.3
Q ss_pred hhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHh----------hhHHHHHHHHHHH
Q 010744 69 EAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGA----------SQHFLHVGMWRAV 138 (502)
Q Consensus 69 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~----------~~~~~~l~~~r~l 138 (502)
+++|.++.++|.+.+...++..++....+++.+|++.|+++.++.++.+++.+.... .++.+.+...-++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 568999999999999999999999999999999999999999999999998865431 1344455666789
Q ss_pred HhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcc--cCcccchHHHHHHHHHHHHHHHH
Q 010744 139 NGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQF--WGVPGWRCAFILMATLSVLIAFL 216 (502)
Q Consensus 139 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~--~~~~~wr~~f~~~~~~~~~~~~~ 216 (502)
.+++.+....+...++.+..|+++++...++.++..++|..+++.+++.+.+..+ .++++.++...+...+.-+..+.
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~ 440 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLP 440 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988743 22233344444433333333333
Q ss_pred HHHhccC
Q 010744 217 VLVFVVD 223 (502)
Q Consensus 217 ~~~~~~~ 223 (502)
..++.|+
T Consensus 441 ~~~llP~ 447 (468)
T TIGR00788 441 LLHLLPR 447 (468)
T ss_pred HHHhCCC
Confidence 3335554
No 235
>PRK09669 putative symporter YagG; Provisional
Probab=98.80 E-value=5e-08 Score=96.59 Aligned_cols=117 Identities=13% Similarity=0.086 Sum_probs=93.1
Q ss_pred CCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHhhhhhhhhhhhHHH
Q 010744 76 SDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGA--SQHFLHVGMWRAVNGFGLAIVIPALQSF 153 (502)
Q Consensus 76 ~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 153 (502)
+..+.+.....+...++.+++++++||+|+|+.+..+.++.++..+...+ .++.+.+++..++.|++.+...+...++
T Consensus 264 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am 343 (444)
T PRK09669 264 DLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSM 343 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445566667788888899999999999999999888776654433222 3577778888899999999999999999
Q ss_pred HhhccCC-------CCcchhhhHHHHHHhhhhhHHHHHHHHHhhhc
Q 010744 154 IADSYKD-------GVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQ 192 (502)
Q Consensus 154 i~~~~~~-------~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~ 192 (502)
++|..+. ++.|...+..+....+|..+|+.+++.+.+..
T Consensus 344 ~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~ 389 (444)
T PRK09669 344 FSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWV 389 (444)
T ss_pred HHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9998852 23456788889999999999999999988763
No 236
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.79 E-value=2.9e-08 Score=98.95 Aligned_cols=133 Identities=11% Similarity=0.027 Sum_probs=103.1
Q ss_pred hchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHh-----hhHHHHHH
Q 010744 59 LLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGA-----SQHFLHVG 133 (502)
Q Consensus 59 ~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~l~ 133 (502)
......+.+.+...-+....+++.+...++..++.+++++++||+|+|+.+.++.++..++.+...+ .++.+.++
T Consensus 249 ~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (473)
T PRK10429 249 IINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIV 328 (473)
T ss_pred HHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHH
Confidence 3333444444444335556777777777889999999999999999999999888877766655432 35567777
Q ss_pred HHHHHHhhhhhhhhhhhHHHHhhccC-------CCCcchhhhHHHHHHhhhhhHHHHHHHHHhhh
Q 010744 134 MWRAVNGFGLAIVIPALQSFIADSYK-------DGVRGAGFGLLSLVGTMGGIGGGVLATIMAGH 191 (502)
Q Consensus 134 ~~r~l~G~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~ 191 (502)
+.-++.|++.+...+...++++|..+ .++.|..++......-+|..+++.+.+++.+.
T Consensus 329 i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~ 393 (473)
T PRK10429 329 IAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGL 393 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78889999999999999999999965 33345688999999999999999999998765
No 237
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.79 E-value=4.1e-08 Score=93.35 Aligned_cols=151 Identities=16% Similarity=0.122 Sum_probs=135.9
Q ss_pred HHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhh
Q 010744 64 YKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNGFGL 143 (502)
Q Consensus 64 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 143 (502)
+---.||++..+...|........+-.+.-++.+++..|+|+-+++..++....+=.+..+..+|.|..+-..+++|+..
T Consensus 394 LfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~ 473 (618)
T KOG3762|consen 394 LFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITH 473 (618)
T ss_pred HHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHH
Confidence 33445788878888898888888888999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHhhccCCCCcchhhhHHHH-HHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHHH
Q 010744 144 AIVIPALQSFIADSYKDGVRGAGFGLLSL-VGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVLV 219 (502)
Q Consensus 144 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~ 219 (502)
+.++.+..+|++...||+-|..+.++.+. ..++|--+|.++|+.+.+. .+=|..|.+.++.+++..++...
T Consensus 474 aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~-----fg~~ttf~~~giAcl~~l~~~~~ 545 (618)
T KOG3762|consen 474 ALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVER-----FGARTTFRIFGIACLVTLALFIS 545 (618)
T ss_pred HHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhhee-----ehhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999864 5689999999999999988 89999999999888777665543
No 238
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.75 E-value=3.2e-07 Score=83.45 Aligned_cols=160 Identities=14% Similarity=0.141 Sum_probs=133.5
Q ss_pred hchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhh-cCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 010744 59 LLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVIN-YDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRA 137 (502)
Q Consensus 59 ~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 137 (502)
..-.-+|.+..|-|+|..+.|++.+...+.....++....+++| -++|+..+...+++.++.+.+.+.+.-..+.. -+
T Consensus 226 ~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~ 304 (395)
T COG2807 226 IVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-AL 304 (395)
T ss_pred HHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HH
Confidence 44455889999999999999999999999999999999999995 57788888888889999888888766544444 49
Q ss_pred HHhhhhhhhhhhhHHHHhhccCC-CCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHH
Q 010744 138 VNGFGLAIVIPALQSFIADSYKD-GVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFL 216 (502)
Q Consensus 138 l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~ 216 (502)
+.|+|.|..++.+..++.+..+. ++-++-.+..|....+=..+||.+.|++.|.. .+|+..+.......+++.+.
T Consensus 305 llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~----gsw~~~~~~l~~~~i~m~i~ 380 (395)
T COG2807 305 LLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDAT----GSWSAPLVLLALATLLMLIF 380 (395)
T ss_pred HHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhc----CChHHHHHHHHHHHHHHHHH
Confidence 99999999999999999887754 55567778888888888899999999998863 78999999988888887777
Q ss_pred HHHhccC
Q 010744 217 VLVFVVD 223 (502)
Q Consensus 217 ~~~~~~~ 223 (502)
.+..-|+
T Consensus 381 Gl~a~r~ 387 (395)
T COG2807 381 GLRAGRN 387 (395)
T ss_pred Hhhcchh
Confidence 7765443
No 239
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.75 E-value=1.5e-05 Score=76.00 Aligned_cols=382 Identities=10% Similarity=0.022 Sum_probs=192.2
Q ss_pred HHHHHHHHHHHhhhhchhhHHHHHhh--cCCCCCCchHHHHHHHHHHhhhcchhhhhhh-----hcCCchhHHH-HHHHH
Q 010744 45 LINLAAIMERADENLLPSVYKEVSEA--FNAGPSDLGYLTFIRNFVQGLSSPLAGVLVI-----NYDRPAVLTI-GILCW 116 (502)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d-----r~Grr~~l~~-~~~~~ 116 (502)
++.+.+++.+.-.+.....+|.+.++ -+.|.+|.+...-+ ...+. .-++|.++.| |+||||..++ .-.+.
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla-~~PfS-lKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~ 81 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLA-SYPFS-LKLLWAPIVDSVYSKRIGRRKSWIIPIQYLS 81 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeee-echhH-HHHhhhhhhhhhcccccCCcchhhhHHHHHH
Confidence 45566777776666655678888888 67888887654311 11111 1234455554 8999996443 22333
Q ss_pred HHHHHHHHhhh----------------------HH--HHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHH
Q 010744 117 AFSTAAVGASQ----------------------HF--LHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSL 172 (502)
Q Consensus 117 ~~~~~~~~~~~----------------------~~--~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~ 172 (502)
++..+..+..- +. ..+...-++.=+-.+....+.-.+.-....+++++.|..-...
T Consensus 82 g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtv 161 (544)
T PF13000_consen 82 GILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTV 161 (544)
T ss_pred HHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHh
Confidence 33333222211 01 1122222223333344444555555556678888888888777
Q ss_pred HHhhhhhHHHHHHHHHhhhcc--------c---CcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCC-CCCc-
Q 010744 173 VGTMGGIGGGVLATIMAGHQF--------W---GVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTG-ENFD- 239 (502)
Q Consensus 173 ~~~~G~~~g~~~~~~l~~~~~--------~---~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~- 239 (502)
+.++|..++..+--.+.+... . +...-..-..+.+...++..+...++.+|++.....++.+. ++.+
T Consensus 162 G~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~~ 241 (544)
T PF13000_consen 162 GQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEPINKSDG 241 (544)
T ss_pred HhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCccccccccccc
Confidence 777777776655544433210 0 11111222334455555566666666666443222111110 0000
Q ss_pred -hhh--HhhhcC----CCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhhhhH-HHHHHHHHHhCCChhhHHHHHHH
Q 010744 240 -RDE--LVEKGN----TSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLPWTAM-VFFTMWFELIGFDHSSTAALLSL 311 (502)
Q Consensus 240 -~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~ 311 (502)
.++ .+.++. ..+....++..+...+++|.|.+..+++.....-..+... .-...=+-+.|++.++.+++..+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlEkG~~KE~LAl~~li 321 (544)
T PF13000_consen 242 KSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLEKGLSKEDLALLVLI 321 (544)
T ss_pred cccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHHcCCCHHHhHHHHHH
Confidence 000 000011 1111233455555667788888888877777666655555 44455556799999887766443
Q ss_pred HHhhhcccccchhhhhhhhccccC-C---------------cchh--------HHhhhhh---hhhhhHHHHHhhhccC-
Q 010744 312 FAIGCAVGSFLGGVVADRISQAYP-H---------------SGRV--------MCAQFSA---FMGIPFSWFLLTAIPQ- 363 (502)
Q Consensus 312 ~~~~~~~~~~~~g~l~d~~g~~~~-~---------------~~~~--------~~~~~~~---~~~~~~~~~~~~~~~~- 363 (502)
.+...++.|+++.|+.+-+. + ..|. ..-..+. ++...........++.
T Consensus 322 ----~~P~qii~~~~~~Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP~~ 397 (544)
T PF13000_consen 322 ----DFPFQIILPYYIGKWSAGSPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQLIVYFFPSD 397 (544)
T ss_pred ----hhhHHHHHHHHhhhhhcCCCccccccccccccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHHheEEeCCCC
Confidence 34444444554444422111 0 0000 0000111 1111111111122231
Q ss_pred Ccc--hhHHHHHHHHHHH-HHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhc
Q 010744 364 SVS--NYYTYAVTLVLMG-LTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMF 433 (502)
Q Consensus 364 ~~~--~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~ 433 (502)
... ....+++..-+++ +.....+. ...+.-+.+.+|..-|+.+.+.|++.|+|+.--..+.=++.|...
T Consensus 398 g~v~~~Yf~lvI~~~~l~sf~stvmFV-ai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT 469 (544)
T PF13000_consen 398 GPVPTYYFLLVIIQHVLSSFMSTVMFV-AIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFT 469 (544)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhcc
Confidence 111 1122222222222 22233333 456677788889999999999999999999988888888888853
No 240
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.72 E-value=7.2e-08 Score=88.39 Aligned_cols=158 Identities=13% Similarity=0.160 Sum_probs=129.1
Q ss_pred hhchhhHHH-HHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcC--CchhHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 010744 58 NLLPSVYKE-VSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYD--RPAVLTIGILCWAFSTAAVGASQHFLHVGM 134 (502)
Q Consensus 58 ~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (502)
...-|.++. +.|.+..+..++|+..--..+.+.++..+.|.++||++ |-.....++++.++......+++++.++++
T Consensus 287 afLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~v 366 (464)
T KOG3764|consen 287 AFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWV 366 (464)
T ss_pred HHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhh
Confidence 344455555 56777866669999998899999999999999999999 533556667777777777788999999999
Q ss_pred HHHHHhhhhhhhhhhhHHHHhhccCCC------CcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHH
Q 010744 135 WRAVNGFGLAIVIPALQSFIADSYKDG------VRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMAT 208 (502)
Q Consensus 135 ~r~l~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~ 208 (502)
-++..|++.+.........+....+.+ -.|...++...++++|..+||.+++.+.+. .|++|.-.+.++
T Consensus 367 p~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~-----iGF~wl~~iig~ 441 (464)
T KOG3764|consen 367 PNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEA-----IGFEWLMTIIGI 441 (464)
T ss_pred hhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheee-----hhHHHHHHHHHH
Confidence 999999988877776666666665443 357899999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHHHh
Q 010744 209 LSVLIAFLVLVF 220 (502)
Q Consensus 209 ~~~~~~~~~~~~ 220 (502)
..++.+.+..++
T Consensus 442 ~n~iyapvl~ll 453 (464)
T KOG3764|consen 442 LNLIYAPVLLLL 453 (464)
T ss_pred HHHHHHHHHHHH
Confidence 998887776654
No 241
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.70 E-value=1.4e-08 Score=82.77 Aligned_cols=109 Identities=18% Similarity=0.244 Sum_probs=78.0
Q ss_pred HHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCC
Q 010744 311 LFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAAN 390 (502)
Q Consensus 311 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 390 (502)
...++.+++.+..+++.||++||+.. ..+............ ...+ .+......++.|++.+...+ ..
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~-------~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~g~~~~~~~~-~~ 72 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVL-------LVGLFIFVLSTAMFA----LSSN-ITVLIIARFLQGFGAAFALV-AG 72 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHH-------HHHHHHHHHHHHHHH----Hhcc-HHHHHHHHHHHHHHHHHHHH-hH
Confidence 34567778889999999999998742 111111111111111 1122 34455667788888777766 67
Q ss_pred ccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 391 GPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 391 ~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
..+..|..|+++|+++.++.+....++..++|.+.+.+.+..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 114 (141)
T TIGR00880 73 AALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL 114 (141)
T ss_pred HHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc
Confidence 888999999999999999999999999999999999998763
No 242
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.70 E-value=3e-08 Score=70.54 Aligned_cols=81 Identities=17% Similarity=0.095 Sum_probs=75.5
Q ss_pred HHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHH
Q 010744 53 ERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHV 132 (502)
Q Consensus 53 ~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l 132 (502)
.++.+..+.|++|.+.+|.++|.++.|++.+.+++||.+|.+...++.++..+++.+..+++...+..+.+++.++.+.+
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 35677889999999999999999999999999999999999999999999889999999999999999999999988765
Q ss_pred H
Q 010744 133 G 133 (502)
Q Consensus 133 ~ 133 (502)
.
T Consensus 84 ~ 84 (85)
T PF06779_consen 84 S 84 (85)
T ss_pred h
Confidence 3
No 243
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.61 E-value=1.3e-06 Score=80.86 Aligned_cols=165 Identities=16% Similarity=0.071 Sum_probs=134.1
Q ss_pred HHHHHHHHHHHHHHhhhhchhhHHHHHhh-cCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHH
Q 010744 42 SLILINLAAIMERADENLLPSVYKEVSEA-FNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFST 120 (502)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 120 (502)
.+..-.++.|+...........++.+.+| .|.+..+.....+.+..+.++|..+.-++..|+...|.+.+..++..+-+
T Consensus 237 ~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~ 316 (422)
T COG0738 237 HLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLL 316 (422)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 34445555666666666666777777766 78899999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccch
Q 010744 121 AAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWR 200 (502)
Q Consensus 121 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr 200 (502)
+..+++++...+... ++.|+..+..+|...++-.+..| +.....|..-....+|.++-|.+-|++.++ .|-.
T Consensus 317 ~~~~l~~g~v~~~~l-~~ig~F~simfPTIfslal~~l~--~~ts~~s~~l~maivGGAiiP~l~G~i~d~-----~g~~ 388 (422)
T COG0738 317 LAVALIGGVVALYAL-FLIGLFNSIMFPTIFSLALKNLG--EHTSVGSGLLVMAIVGGAIIPPLQGVIADM-----FGIQ 388 (422)
T ss_pred HHHHHhcChHHHHHH-HHHHHHhHHHHHHHHHHHHhccC--ccccccceeeeeheecchHHHHHHHHHHHh-----hhhH
Confidence 999999997666544 88899999999999999999997 444555555666778999999999999998 7888
Q ss_pred HHHHHHHHHHHHHH
Q 010744 201 CAFILMATLSVLIA 214 (502)
Q Consensus 201 ~~f~~~~~~~~~~~ 214 (502)
..+.+...+|.+..
T Consensus 389 ~~~~~~pllc~lyV 402 (422)
T COG0738 389 LTFLIVPLLCYLYV 402 (422)
T ss_pred HHHHHHHHHHHHHH
Confidence 88776666665555
No 244
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.60 E-value=5.6e-07 Score=89.53 Aligned_cols=126 Identities=15% Similarity=0.135 Sum_probs=82.4
Q ss_pred HHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhH
Q 010744 290 FFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYY 369 (502)
Q Consensus 290 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (502)
.++.+.++.|-+ ....++.....++..+..++.|+++|.+|||+. .+.+.++. .+........+ +..
T Consensus 66 ~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~-------~i~g~~l~----vvG~Iv~atA~-~~~ 132 (599)
T PF06609_consen 66 ILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYF-------FIIGSLLG----VVGSIVCATAQ-NMN 132 (599)
T ss_pred HHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHH-------HHHHHHHH----HhHHHHhhcCC-cHH
Confidence 356566778876 455677777888888999999999999999973 22222222 22222222233 345
Q ss_pred HHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHH
Q 010744 370 TYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSE 430 (502)
Q Consensus 370 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~ 430 (502)
.++....+.|++.+.... ....++|..|.+.|..+.++.....-....++|.+...+..
T Consensus 133 ~~iag~~l~GvgaG~~~~--~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~ 191 (599)
T PF06609_consen 133 TFIAGMVLYGVGAGVQEL--AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAA 191 (599)
T ss_pred HHHHHHHHHHHhhHHHHH--HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhcc
Confidence 567788888888766553 56668999999999888777665443444466666555443
No 245
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.59 E-value=4.4e-06 Score=78.04 Aligned_cols=156 Identities=17% Similarity=0.067 Sum_probs=130.4
Q ss_pred HHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhh-hcCCchhHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHh
Q 010744 65 KEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVI-NYDRPAVLTIGILCWAFSTAAVGA---SQHFLHVGMWRAVNG 140 (502)
Q Consensus 65 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d-r~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G 140 (502)
|+=.+-||++..|...++..+..|..++....|++.. |.++|++..++....+++..+..+ ..+.+.+...-++.|
T Consensus 233 Pygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G 312 (403)
T PF03209_consen 233 PYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLG 312 (403)
T ss_pred CchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence 3445668999999999999999999999999999888 688888888888888877766444 467889999999999
Q ss_pred hhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcc---c--CcccchHHHHHHHHHHHHHHH
Q 010744 141 FGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQF---W--GVPGWRCAFILMATLSVLIAF 215 (502)
Q Consensus 141 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~---~--~~~~wr~~f~~~~~~~~~~~~ 215 (502)
++.|.+.....+..-+..++++.|..+|.+.....+...+|..+++.+.+... . ...++-.+|.+.++..++..+
T Consensus 313 ~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ 392 (403)
T PF03209_consen 313 LGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALV 392 (403)
T ss_pred HhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998876522 1 335788888888877666655
Q ss_pred HHHHh
Q 010744 216 LVLVF 220 (502)
Q Consensus 216 ~~~~~ 220 (502)
+...+
T Consensus 393 ll~~l 397 (403)
T PF03209_consen 393 LLGRL 397 (403)
T ss_pred HHHHh
Confidence 55443
No 246
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.57 E-value=1.9e-07 Score=87.24 Aligned_cols=185 Identities=14% Similarity=0.032 Sum_probs=136.5
Q ss_pred HHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchH--------HHHH-HHHHHhhhcchhhhhhhhcCCchhHHH
Q 010744 41 LSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGY--------LTFI-RNFVQGLSSPLAGVLVINYDRPAVLTI 111 (502)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~--------~~s~-~~~~~~~~~~~~G~l~dr~Grr~~l~~ 111 (502)
+.+...+..+|+.....+..+.....+.+++++.+.+... ...+ ...++..+..+...+.|+.|||++.+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 5667778888888777788888888999988887765444 1122 223444477788899999999999999
Q ss_pred HHHHHHHHHHHHHhhhH----HHHHHHHHHHHhhhhh-hhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHH
Q 010744 112 GILCWAFSTAAVGASQH----FLHVGMWRAVNGFGLA-IVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLAT 186 (502)
Q Consensus 112 ~~~~~~~~~~~~~~~~~----~~~l~~~r~l~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~ 186 (502)
+.+++++..+..+...| -..+++...+..+... +-......+-+|.+|.+-|+..-|+..+..-.|.++|...-.
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~ 463 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFL 463 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhh
Confidence 99999999999988766 1223333333333211 122333445689999999999999999999999999999999
Q ss_pred HHhhhcccCcccchHHHHHHHHHHHHHHHHHHHhccCCc
Q 010744 187 IMAGHQFWGVPGWRCAFILMATLSVLIAFLVLVFVVDPR 225 (502)
Q Consensus 187 ~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~ 225 (502)
++.++......+.|+++++.+..+++..+..+++||+..
T Consensus 464 ~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~ 502 (538)
T KOG0252|consen 464 YLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKG 502 (538)
T ss_pred HhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccc
Confidence 988732122278999999999998888888887775433
No 247
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.56 E-value=3.6e-07 Score=89.36 Aligned_cols=127 Identities=22% Similarity=0.316 Sum_probs=100.0
Q ss_pred hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHH
Q 010744 298 IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVL 377 (502)
Q Consensus 298 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (502)
+.++..+-+++++....+.+++.+.+|++.||+|.|+. ...+.++......+.-... ... .+.+++.=++
T Consensus 68 ~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v-------~~~~~~~sa~~t~l~P~aa--~~~-~~~~~~~R~l 137 (466)
T KOG2532|consen 68 YDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRV-------FFISGLISALLTLLTPLAA--SIG-FYLLLVLRFL 137 (466)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHH-------HHHHHHHHHHHHHHHHHHH--Hhc-chhhHHHHHH
Confidence 78889999999999999999999999999999999984 2222222222221111111 111 2245778889
Q ss_pred HHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcCC
Q 010744 378 MGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFGY 435 (502)
Q Consensus 378 ~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~ 435 (502)
.|++.+...| .+..+..+-.|+++|++..++.....++|..++-++.|.+.+...+|
T Consensus 138 qGl~~g~~~p-a~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW 194 (466)
T KOG2532|consen 138 QGLGQGVLFP-AIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGW 194 (466)
T ss_pred hHHHHhHHHh-hhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCC
Confidence 9999999998 88999999999999999999999999999999999999999986666
No 248
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.54 E-value=2.1e-06 Score=70.08 Aligned_cols=110 Identities=17% Similarity=0.136 Sum_probs=95.9
Q ss_pred HHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccC
Q 010744 80 YLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYK 159 (502)
Q Consensus 80 ~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 159 (502)
.-.++......++.++.+.+.+++|.|+.++++.+.+.+-.... +-++.+.++.+-++.|++.+..+++.-.++.+..+
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~ 119 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYST 119 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCC
Confidence 34566777788888999999999999999999999998665554 46778889999999999999999999999999999
Q ss_pred CCCcchhhhHHHHHHhhhhhHHHHHHHHHhh
Q 010744 160 DGVRGAGFGLLSLVGTMGGIGGGVLATIMAG 190 (502)
Q Consensus 160 ~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 190 (502)
+++|++-.+++......+.++|.++...+.+
T Consensus 120 ~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 120 EETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999888776654
No 249
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.47 E-value=6.9e-07 Score=85.04 Aligned_cols=179 Identities=15% Similarity=0.173 Sum_probs=114.5
Q ss_pred hHHHHHHHHHHhhhhh-hhhHHHHHHHHHH-h----CCChhhHHHHHHHHHhhhcccccchhhhhhhh-ccccCCcchhH
Q 010744 269 PTFQIIVLQGIVGSLP-WTAMVFFTMWFEL-I----GFDHSSTAALLSLFAIGCAVGSFLGGVVADRI-SQAYPHSGRVM 341 (502)
Q Consensus 269 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~----g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~ 341 (502)
|.++.+...-+.=-+. |+.-..+-.|+.. . |++..++.-++..+..-.-...+++||++||+ |+|+.
T Consensus 21 r~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t------ 94 (498)
T COG3104 21 RGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT------ 94 (498)
T ss_pred chHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH------
Confidence 3344444444443333 3333555566643 4 49998888887777666667788999999996 77774
Q ss_pred HhhhhhhhhhhHHHHHhhhccCCc-chhHHHHHHHHHHHHHHhhhccCCCccchhcccCCC--chhhHHHHHHHhhhhhh
Q 010744 342 CAQFSAFMGIPFSWFLLTAIPQSV-SNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAK--HRTMIYAFDRAFEGSFS 418 (502)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~~~ 418 (502)
++++.++..+..+...... .....+.+.+.+.++|.|..-+ ...+++.|++|++ +|-.+.++.....++|+
T Consensus 95 -----I~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~-NiS~llg~ly~~~DprrD~gFt~fY~~iNiGs 168 (498)
T COG3104 95 -----IVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKP-NISSLLGELYPKDDPRRDGGFTLFYMGINIGS 168 (498)
T ss_pred -----HHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccc-cHHHHHHHhcCCCCcccCCCccEEEEEeehHH
Confidence 2222222222222222221 2233456777777788888887 7889999999764 35678888888899999
Q ss_pred hhhHHHHHHHHHHhcCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 010744 419 SFAAPLVGILSEKMFGYDSKAIDPVMGSPREALALSRGLLSMMAVPFGLCCLFYTPLYKIF 479 (502)
Q Consensus 419 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (502)
.++|.+.+++.++. +| ...+...++....+.+.+...++..
T Consensus 169 l~~p~i~~~~~~~~-g~-------------------~~gF~~aavGm~~gl~~f~~~~r~~ 209 (498)
T COG3104 169 LIAPIITGLLAINY-GW-------------------HVGFGLAAVGMIIGLVIFLLGRRHV 209 (498)
T ss_pred HHHHHHHHHHHHhh-CH-------------------HHHHHHHHHHHHHHHHHHHHccchh
Confidence 99999999999994 33 3345555555666666665555443
No 250
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.46 E-value=2.3e-06 Score=75.86 Aligned_cols=135 Identities=19% Similarity=0.224 Sum_probs=87.5
Q ss_pred hhhHHHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCC
Q 010744 285 WTAMVFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQS 364 (502)
Q Consensus 285 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (502)
|....|.|..-+.+|+|..+...+.....++..+| +..|.+.|++|.+. .+.++.+................
T Consensus 19 Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~-------~l~iG~~~~~~GY~~~~l~~~~~ 90 (250)
T PF06813_consen 19 YTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWV-------VLLIGAVLGFVGYGLLWLAVSGR 90 (250)
T ss_pred cchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHH-------HHHHHHHHHHHHHHHHHHHHhCc
Confidence 33335667766669999999999988888888765 88899999999875 33333333333333333322221
Q ss_pred --cchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHH
Q 010744 365 --VSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILS 429 (502)
Q Consensus 365 --~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~ 429 (502)
..+.+.+.+...+.|.+.++..+ .......+.+| ++||++.|+.-....+++++-..+...+.
T Consensus 91 i~~~~~~~~~~~~~l~~~s~~~~~t-a~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 91 IPSLPVWLMCLFLFLGGNSSCWFNT-ASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred cCccchHHHHHHHHHHcccHHHhhh-HHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHc
Confidence 23445555666666666555444 23333446688 68999999999998888876655554444
No 251
>PRK11462 putative transporter; Provisional
Probab=98.45 E-value=2.8e-06 Score=84.20 Aligned_cols=128 Identities=16% Similarity=0.012 Sum_probs=88.2
Q ss_pred HHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhh--HHHHHHHHHHHHhh
Q 010744 64 YKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQ--HFLHVGMWRAVNGF 141 (502)
Q Consensus 64 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~ 141 (502)
...+.+...-++...+.+.+.+.++..++.+++++++||+|+|+++..+..+.++..++..+.+ +...+++.-++.|+
T Consensus 251 ~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 330 (460)
T PRK11462 251 MMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGV 330 (460)
T ss_pred hhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHH
Confidence 3344333332344456677888888899999999999999999987766555544444333322 23344455567788
Q ss_pred hhhhhhhhhHHHHhhccC-------CCCcchhhhHHHHHHhhhhhHHHHHHHHHhhh
Q 010744 142 GLAIVIPALQSFIADSYK-------DGVRGAGFGLLSLVGTMGGIGGGVLATIMAGH 191 (502)
Q Consensus 142 ~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~ 191 (502)
+.+...+...++++|..+ .++.|..++......-+|..+++.+++.+.+.
T Consensus 331 ~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~ 387 (460)
T PRK11462 331 LHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAY 387 (460)
T ss_pred HHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877777777778887775 23335556777788999999999999988765
No 252
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.45 E-value=0.00025 Score=71.22 Aligned_cols=177 Identities=18% Similarity=0.129 Sum_probs=133.6
Q ss_pred chhHHHHHHHHHHHHHHHHhh-hhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhh-cCCchhHHHHHH
Q 010744 37 LGISLSLILINLAAIMERADE-NLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVIN-YDRPAVLTIGIL 114 (502)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~ 114 (502)
...|+....+.....+..+.. ......+..+.++++.+...+.-..+.+.-......+..+.++|- +||-+++.++.+
T Consensus 33 ~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~ 112 (571)
T KOG1237|consen 33 TGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSL 112 (571)
T ss_pred echhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 344554444443334443333 344667788889999888888888888888888999999999996 588889999999
Q ss_pred HHHHHHHHHHhhhH-------------------------HHHHHHHHHHHhhhhhhhhhhhHHHHhhccC---CC---Cc
Q 010744 115 CWAFSTAAVGASQH-------------------------FLHVGMWRAVNGFGLAIVIPALQSFIADSYK---DG---VR 163 (502)
Q Consensus 115 ~~~~~~~~~~~~~~-------------------------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~---~~---~r 163 (502)
+..++.++..++.. ...+..+.-+..+|.|+.-|...++-+|-++ ++ ++
T Consensus 113 i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~ 192 (571)
T KOG1237|consen 113 ISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGI 192 (571)
T ss_pred HHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCc
Confidence 99888766554322 1246777788888999999999999999997 32 23
Q ss_pred chhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHH
Q 010744 164 GAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVL 218 (502)
Q Consensus 164 ~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~ 218 (502)
...+.++....++|..++..+..+.-+. .+|.+.|.+..+..++..++.+
T Consensus 193 ~~fFnW~yf~~~~g~l~a~t~~vyiq~~-----~~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 193 PSFFNWFYFSQNGGALLAQTVLVYIQDN-----VGWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhhc-----ccceeeccHHHHHHHHHHHHHH
Confidence 3778899999999999998888888666 8999999998877666555444
No 253
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.45 E-value=9.7e-07 Score=79.41 Aligned_cols=340 Identities=10% Similarity=0.015 Sum_probs=199.3
Q ss_pred hHHHHH-hhcCCCCCCch-HHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Q 010744 63 VYKEVS-EAFNAGPSDLG-YLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNG 140 (502)
Q Consensus 63 ~~~~i~-~~~~~s~~~~g-~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 140 (502)
+.|.+. .+.|++..++. -+.=...-.+.+.-.+.=.+.|-.-.|++++.-.+.......+.-+.++.+.+=+.-++-|
T Consensus 27 ~tpyl~gp~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG 106 (433)
T KOG3810|consen 27 LTPYLLGPDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYG 106 (433)
T ss_pred cchhccCCCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcC
Confidence 344444 34455544432 2222333344455555667899999999999988888888889999999999999999999
Q ss_pred hhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHHHh
Q 010744 141 FGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVLVF 220 (502)
Q Consensus 141 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 220 (502)
.. .....+-++++-...+|+++.++.+-..+..-.|..+|..++..+.+. +..+....-.+.-....+..++.+++
T Consensus 107 ~~-tAaEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~---~~~sy~~LN~ISL~~~~ia~~~A~fL 182 (433)
T KOG3810|consen 107 PA-TAAEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSL---ETLSYTTLNYISLAEVTIAVLLALFL 182 (433)
T ss_pred hH-HHHHHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhh---cccchhhhchhhHHHHHHHHHHHhhC
Confidence 97 445677889999999999999999999999999999999999988875 22344444444444333444444554
Q ss_pred ccCCccccCCCCCCCCCCchhhHhhhcCCCcc----hhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhhhhH-HHHHHHH
Q 010744 221 VVDPRKKASTFHGTGENFDRDELVEKGNTSVS----SVWLESWMATKAVIKVPTFQIIVLQGIVGSLPWTAM-VFFTMWF 295 (502)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 295 (502)
|+.++..--+. .+++....+.++...+.+.. ......++++....++|.+....+...+....+... +|.-..-
T Consensus 183 P~v~rSl~f~~-~~~~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW 261 (433)
T KOG3810|consen 183 PRVKRSLYFHR-LEDKISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILW 261 (433)
T ss_pred CCCchhhhhhc-ccccceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHH
Confidence 44332221111 11111111111111111111 123344556667778888887777776665554444 4443333
Q ss_pred HHhCCC--hhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHH
Q 010744 296 ELIGFD--HSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAV 373 (502)
Q Consensus 296 ~~~g~s--~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (502)
++..-+ ..-.|..=++..+.++++.+..|.+--+..|+.. +.+. .+ ...-....++ .....+ .++..+
T Consensus 262 ~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~----~ll~-~~---s~~~agllf~-m~~t~~-Iw~~Ya 331 (433)
T KOG3810|consen 262 KEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGD----LLLA-VG---SAVQAGLLFI-MAQTQH-IWVCYA 331 (433)
T ss_pred HhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhH----HHHH-HH---HHHhhhhhhh-hhcccc-eehhhh
Confidence 333211 1122444455666677777888887666655532 1121 11 1112222222 222333 455666
Q ss_pred HHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhh
Q 010744 374 TLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFS 418 (502)
Q Consensus 374 ~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~ 418 (502)
...++........+ +...-+++....+.-|...|+..++.-+..
T Consensus 332 ~yvlfr~~y~l~it-iA~~~iA~nL~~e~~gLvFGiNTFvAl~lQ 375 (433)
T KOG3810|consen 332 GYVLFRVIYQLTIT-IATFQIARNLSSELFGLVFGINTFVALILQ 375 (433)
T ss_pred hHHHHHhhHhhhhh-HHHHHHHHhhhhhhheeeeehHHHHHHHHH
Confidence 77777766666555 455555555666777888888766544433
No 254
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.31 E-value=2.5e-05 Score=75.17 Aligned_cols=142 Identities=16% Similarity=0.185 Sum_probs=99.6
Q ss_pred HHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccC--Cc
Q 010744 289 VFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQ--SV 365 (502)
Q Consensus 289 ~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 365 (502)
.|+..|..+ .|+++..+|.++.+.=+...+.-++.|.+.||..+|+-. .|.++.....-.+ +...+.+..+. ..
T Consensus 33 ~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~Gr-fRP~lL~g~ip~~--i~~~l~F~~p~~~~~ 109 (467)
T COG2211 33 LYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGR-FRPWLLWGAIPFA--IVAVLLFITPDFSMT 109 (467)
T ss_pred HHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeeccccccccc-ccHHHHHHhHHHH--HHHHHHHcCCCcccC
Confidence 678888887 999999999999999999999999999999976543321 1222322222221 11222222221 12
Q ss_pred chhHHHHHHHHHHHHHHhhhccCCCccchhcccC-CCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcC
Q 010744 366 SNYYTYAVTLVLMGLTISWNATAANGPMFAEVVP-AKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFG 434 (502)
Q Consensus 366 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p-~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~ 434 (502)
..+....+...+++++......| ..++..|..+ +++|.+..+.-..+.++|..+...+.+.+.+..++
T Consensus 110 ~k~~ya~vtY~l~~l~YT~vniP-y~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~ 178 (467)
T COG2211 110 GKLIYALVTYMLLGLGYTLVNIP-YGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGG 178 (467)
T ss_pred cchHHHHHHHHHHHHHHHheeCc-hhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 33444566777788888777763 6677777654 48899999999999999999999999898888754
No 255
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.29 E-value=2.3e-06 Score=86.66 Aligned_cols=120 Identities=22% Similarity=0.210 Sum_probs=93.8
Q ss_pred hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHH
Q 010744 298 IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVL 377 (502)
Q Consensus 298 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (502)
...+.....+..+++.++.++|.++.|.++||+|||+. ...+.++..++. ...... .+...+.+.=++
T Consensus 113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~-------~~~~~~~~~i~~----~~~a~a-~~~~~~~~~Rfl 180 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPV-------LLVSLLLFIIFG----ILTAFA-PNYWMFLIFRFL 180 (521)
T ss_pred eeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHH-------HHHHHHHHHHHH----HHHHHh-CcHHHHHHHHHH
Confidence 56677778888889999999999999999999999984 222222222222 112222 335667788899
Q ss_pred HHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHH
Q 010744 378 MGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEK 431 (502)
Q Consensus 378 ~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~ 431 (502)
.|++.+.... +...+..|.+++++|+.+..+ ......++.+++...+++...
T Consensus 181 ~G~~~~~~~~-~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~ 232 (521)
T KOG0255|consen 181 SGFFGSGPLT-VGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRD 232 (521)
T ss_pred HHhhccchhH-HhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhh
Confidence 9999888888 789999999999999999999 888889999999999988874
No 256
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.28 E-value=3.2e-05 Score=78.03 Aligned_cols=182 Identities=14% Similarity=0.067 Sum_probs=120.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHH
Q 010744 40 SLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFS 119 (502)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 119 (502)
...+..+.+..+......+......+.+-+..+.+... .+...+......++..+...+.||+|||+.++.+...+.++
T Consensus 294 ~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~ 372 (513)
T KOG0254|consen 294 KRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSIC 372 (513)
T ss_pred HHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHH
Confidence 33444444444554555566667778888888776443 55555566666777777799999999999999999999999
Q ss_pred HHHHHhhhHH-------------HHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHH
Q 010744 120 TAAVGASQHF-------------LHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLAT 186 (502)
Q Consensus 120 ~~~~~~~~~~-------------~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~ 186 (502)
.++.+..... ..+...-+.......+..+....+.+|.+|.+-|+++.++......+...+-.....
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~ 452 (513)
T KOG0254|consen 373 LVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFP 452 (513)
T ss_pred HHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 9988764222 122222333333334445666678899999999999999988777666655443333
Q ss_pred HHhhhcccCcccchHHHHHHHHHHHHHHH-HHHHhccCCccc
Q 010744 187 IMAGHQFWGVPGWRCAFILMATLSVLIAF-LVLVFVVDPRKK 227 (502)
Q Consensus 187 ~l~~~~~~~~~~wr~~f~~~~~~~~~~~~-~~~~~~~~~~~~ 227 (502)
...+. .++...|...+..+.+... ..+++.||++..
T Consensus 453 ~~~~~-----~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~ 489 (513)
T KOG0254|consen 453 FITEA-----LGIGGTFGYFGGICLLSLIIFVFFFVPETKGL 489 (513)
T ss_pred HHHHh-----ccccchHHHHHHHHHHHHHHHheEEcccCCCC
Confidence 33332 3356777777777777666 566666766543
No 257
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.28 E-value=8.7e-09 Score=102.42 Aligned_cols=163 Identities=23% Similarity=0.262 Sum_probs=111.2
Q ss_pred hhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHH--h---hhH----
Q 010744 58 NLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVG--A---SQH---- 128 (502)
Q Consensus 58 ~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~--~---~~~---- 128 (502)
.......+.+.++.+.+.. -.......+...++.++...+.||+|||++++.+..+.++..+..+ . .++
T Consensus 270 ~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (451)
T PF00083_consen 270 NFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWW 347 (451)
T ss_pred ccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3444456777777777666 2222233355556777777999999999999999999888887775 1 121
Q ss_pred -HHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHH
Q 010744 129 -FLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMA 207 (502)
Q Consensus 129 -~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~ 207 (502)
+..+.......-....+..+....+..|.+|.+.|+++.++......++..+++.+...+.+. .+-...+++.+
T Consensus 348 ~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~-----~~~~~~~~i~~ 422 (451)
T PF00083_consen 348 SILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNN-----LGGWGVFLIFA 422 (451)
T ss_pred ccccceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccccc-----ccccccchhhH
Confidence 222222221111122234466668889999999999999999999999999998888777664 34245666767
Q ss_pred HHHHHHHHHHHHhccCCccc
Q 010744 208 TLSVLIAFLVLVFVVDPRKK 227 (502)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~ 227 (502)
.++++..+..+++.||++..
T Consensus 423 ~~~~i~~i~~~~~lpET~g~ 442 (451)
T PF00083_consen 423 GVCLIAIIFVYFFLPETKGK 442 (451)
T ss_pred HHHHHHHhheeEEEeeCCCC
Confidence 77777777777878876654
No 258
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.25 E-value=0.0017 Score=63.94 Aligned_cols=282 Identities=13% Similarity=0.098 Sum_probs=156.8
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcC---CCCCCchHHHHHHHH-HHhhhcchhhhhhhhcCCchhHHHHH
Q 010744 38 GISLSLILINLAAIMERADENLLPSVYKEVSEAFN---AGPSDLGYLTFIRNF-VQGLSSPLAGVLVINYDRPAVLTIGI 113 (502)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~s~~~~g~~~s~~~~-~~~~~~~~~G~l~dr~Grr~~l~~~~ 113 (502)
..+..+..+.+..|+..++.+.. -.+.+.+= .+++.+..+-....+ ...+...+..+++++++|.+++-+..
T Consensus 21 ~E~~k~~~l~~m~f~i~f~y~~l----R~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~ 96 (491)
T PF03219_consen 21 SELKKFLPLALMFFFILFNYTIL----RDLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIII 96 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HHhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 34445555565666655554332 23333321 245556666555555 44455778899999999999988887
Q ss_pred HHHHHHHHHHHhh--h-----------------------------HHHHHHHHHHHHhhhhhhhhh-hhHHHHhhccCCC
Q 010744 114 LCWAFSTAAVGAS--Q-----------------------------HFLHVGMWRAVNGFGLAIVIP-ALQSFIADSYKDG 161 (502)
Q Consensus 114 ~~~~~~~~~~~~~--~-----------------------------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~ 161 (502)
..+.....++++. | +.|.+.+.-+..-+-.....+ .-..+..|.++.+
T Consensus 97 ~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~ 176 (491)
T PF03219_consen 97 IPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVE 176 (491)
T ss_pred HHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence 7777777666653 1 122233333333343333333 4577889999999
Q ss_pred CcchhhhHHHHHHhhhhhHHHHHHHHHhh-h---cccCcccchHHHHHHH----HHHHHHHHHHHHhccCCccccCCCCC
Q 010744 162 VRGAGFGLLSLVGTMGGIGGGVLATIMAG-H---QFWGVPGWRCAFILMA----TLSVLIAFLVLVFVVDPRKKASTFHG 233 (502)
Q Consensus 162 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-~---~~~~~~~wr~~f~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (502)
|-.|..+++..+.++|.++++.+..++.+ . ...+...|...+.... +.+.+...+..++-+........
T Consensus 177 eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~--- 253 (491)
T PF03219_consen 177 EAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPRF--- 253 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcccc---
Confidence 99999999999999999999999988887 1 1112345765443222 22222222222222111100000
Q ss_pred CCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhhhhHH-HHHHHHHHhCCChhh----HHHH
Q 010744 234 TGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLPWTAMV-FFTMWFELIGFDHSS----TAAL 308 (502)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~s~~~----~~~~ 308 (502)
. ++. .+++++++.....+..+.++++|.+..+.+..+.......... -.-..+++.--++.+ .|-.
T Consensus 254 ----~--~~~---~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~ 324 (491)
T PF03219_consen 254 ----Y--PSA---KKKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKF 324 (491)
T ss_pred ----c--hhh---hcccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHH
Confidence 0 000 0011111112334566778888888888777766665555552 122223331122222 2334
Q ss_pred HHHHHhhhcccccchhhhhhhhccccC
Q 010744 309 LSLFAIGCAVGSFLGGVVADRISQAYP 335 (502)
Q Consensus 309 ~~~~~~~~~~~~~~~g~l~d~~g~~~~ 335 (502)
....++..++..++++.+.+|+|-+..
T Consensus 325 ~~~tGivtii~~~l~~~iir~~GW~~~ 351 (491)
T PF03219_consen 325 SSWTGIVTIIMMFLSSNIIRRFGWRTA 351 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 445566666666788889998887753
No 259
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.22 E-value=2.4e-06 Score=83.89 Aligned_cols=155 Identities=14% Similarity=0.070 Sum_probs=110.1
Q ss_pred HHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHH
Q 010744 296 ELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTL 375 (502)
Q Consensus 296 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (502)
++.++...+.+.+.+.+.++.+++.+.++.+.||++..+. +...+++.++ +.++... ..+.+.+.+.-
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~------l~~~~~~w~~----~~~~~~~--~~s~~~~ialr 141 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKG------LSVSGILWGL----FGFLTAA--VHSFPGLIALR 141 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHH------HHHHHHHHHH----HHHHHHH--HhhhHHHHHHH
Confidence 3477788889999999999999999999999999995431 1111111111 1111111 23355677889
Q ss_pred HHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcCCCCCCCCCCCCChhhHHHHHH
Q 010744 376 VLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFGYDSKAIDPVMGSPREALALSR 455 (502)
Q Consensus 376 ~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (502)
++.|+..+...| ....++...+.+++|+..+|+.+....+|+.+|+.+...+.+..+.... .++++
T Consensus 142 ~llGl~es~~wP-~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~-------------~gW~~ 207 (495)
T KOG2533|consen 142 FLLGLFESGGWP-GVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGL-------------AGWRW 207 (495)
T ss_pred HHHHHHhcccch-HHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCc-------------CCcee
Confidence 999999999999 7888999999999999999999999999999999998887654333211 25566
Q ss_pred HHHHHHHHHHHHHHHHHhhhh
Q 010744 456 GLLSMMAVPFGLCCLFYTPLY 476 (502)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~ 476 (502)
.+.+..++..+.+.++++.++
T Consensus 208 ~FiI~G~i~~~~gi~~f~~lp 228 (495)
T KOG2533|consen 208 LFIIEGVITLVLGIVVFFFLP 228 (495)
T ss_pred ehhHHHHHHHHHHheEEEEec
Confidence 666666665555555544443
No 260
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.22 E-value=2.9e-06 Score=60.14 Aligned_cols=70 Identities=23% Similarity=0.296 Sum_probs=59.0
Q ss_pred HHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHH
Q 010744 47 NLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCW 116 (502)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 116 (502)
-..+++........-|.+|...++.|+++.|+|.+.++..+...++.+++|.++||+++++.++....++
T Consensus 6 k~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 6 KAFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 3445555556667778888888999999999999999999999999999999999999999877766554
No 261
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.12 E-value=1e-05 Score=78.08 Aligned_cols=151 Identities=11% Similarity=0.079 Sum_probs=97.7
Q ss_pred HHHHHHHHHhhhhhhhhH-HHHHHHHHH--hCCChhhHHHHHHHHHhhhcccccchhhhhhhhcc-ccCCcchhHHhhhh
Q 010744 271 FQIIVLQGIVGSLPWTAM-VFFTMWFEL--IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQ-AYPHSGRVMCAQFS 346 (502)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~-~~~~~~~~~~~~~~ 346 (502)
.+...+..++....++.. .-.-.|+++ .+-+....|++.+...++..+++++.|+...|.+. |+++ +.+
T Consensus 36 i~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pl-------i~s 108 (488)
T KOG2325|consen 36 IYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPL-------IVS 108 (488)
T ss_pred HHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCH-------HHH
Confidence 344444444444433333 223346665 77888889999999999999999999999999986 5542 222
Q ss_pred hhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHH
Q 010744 347 AFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVG 426 (502)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g 426 (502)
.++++....+-.......++..+.+.+.-++.|++.+.... .-.++++..-.++|.++.+..+....++..+||.+..
T Consensus 109 ~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~--lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~ 186 (488)
T KOG2325|consen 109 FLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAV--LRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQL 186 (488)
T ss_pred HHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHH--HHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHH
Confidence 22322222222111112222456677788888888766554 6788888777788889998888877778888887665
Q ss_pred HHHH
Q 010744 427 ILSE 430 (502)
Q Consensus 427 ~l~~ 430 (502)
.+..
T Consensus 187 ~f~~ 190 (488)
T KOG2325|consen 187 AFTP 190 (488)
T ss_pred HHhh
Confidence 4443
No 262
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=98.00 E-value=0.0007 Score=63.69 Aligned_cols=361 Identities=12% Similarity=-0.009 Sum_probs=154.1
Q ss_pred HHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHH--
Q 010744 42 SLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFS-- 119 (502)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~-- 119 (502)
...+.++..+-....++.+..+.+.+.+++-.+.. .-.....+.+...+..++.-.+--+...|.-..++..++.+.
T Consensus 19 v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~-~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~~~~~l~~~~il 97 (406)
T KOG1479|consen 19 VYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN-SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTRVGYLLSLIAIL 97 (406)
T ss_pred HHHHHHHHhcccccchHhhhccHHHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444555667777778888888764444 334444455554444444444444443333222222222222
Q ss_pred -HHHHHhh---------hHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHh
Q 010744 120 -TAAVGAS---------QHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMA 189 (502)
Q Consensus 120 -~~~~~~~---------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~ 189 (502)
...+.++ ..++..++.-++.+++.+......+...++. |+|.- .-+..+.++++++..++--...
T Consensus 98 ~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~-P~~yt----qavm~G~a~aG~l~Sl~~i~tk 172 (406)
T KOG1479|consen 98 FIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLF-PSEYT----QAVMSGQALAGTLTSLLRILTK 172 (406)
T ss_pred HHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhcC-CHHHH----HHHHhcchhHhHHHHHHHHHHH
Confidence 1222222 3466667777888888777777666666554 34432 2222333333333222221111
Q ss_pred hhcccCcccchHHHHHHHHHHHHHHHHHHHhccCCcccc--CCCCCCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcc
Q 010744 190 GHQFWGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKA--STFHGTGENFDRDELVEKGNTSVSSVWLESWMATKAVIK 267 (502)
Q Consensus 190 ~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (502)
........+=..-|.+..++.+++.+....+++.|-.+. .+..+++.+.+..+.+.+. +.++.....+++++
T Consensus 173 a~~~~~~~sA~~yF~~s~~~~llC~i~y~~l~~lpf~~yy~~~~~~~~~~l~~~~~~~~~------~~~~~~~~~~~i~~ 246 (406)
T KOG1479|consen 173 AAFSDSRTSALIYFITSTVILLLCFVLYLVLPKLPFVRYYREKAGSIGSKLAAEGIESDS------SLSNEDDSLWDIFK 246 (406)
T ss_pred HhcCCCCceeehhHHHHHHHHHHHHHHHHHhhcchHHHHHhhhccccccccccccccccc------ccccccchHHHHHH
Confidence 111111122223334444444444444443333332111 1111111110101100000 00000001222222
Q ss_pred hhHHHHHHHHHHhhhhhhhhH-HHHHHHHHH-h---CCChhhHHHHHHH-HHhhhcccccchhhhhhhhccccCCcchhH
Q 010744 268 VPTFQIIVLQGIVGSLPWTAM-VFFTMWFEL-I---GFDHSSTAALLSL-FAIGCAVGSFLGGVVADRISQAYPHSGRVM 341 (502)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~---g~s~~~~~~~~~~-~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 341 (502)
+-. -..+.....+... +..|-+..+ . ..+..-.-+.... +.+...+|.+...++.++-. |+. .
T Consensus 247 k~~-----~~~~~i~lvy~VTLsiFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~-r~l-----~ 315 (406)
T KOG1479|consen 247 KIK-----DLAFNIFLVYFVTLSIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWPDP-RKL-----T 315 (406)
T ss_pred HHH-----HHhhchheeeeeeeEecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCCCC-cee-----h
Confidence 211 1111111222222 345666543 1 1223334444445 78888888777766655443 332 1
Q ss_pred HhhhhhhhhhhHHHHHhh--hccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhh
Q 010744 342 CAQFSAFMGIPFSWFLLT--AIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSS 419 (502)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~ 419 (502)
...+.=.+..+...++.. ......+ -+.......++|+..|.... +.+.+..+.+|++++-.+-.+. .+.-.+|.
T Consensus 316 i~v~lR~lfiPlF~~cn~~~~~v~~~~-~~~~~~l~~~lglsnGYlts-l~m~~aPk~v~~~e~e~aG~~m-~~fl~~Gl 392 (406)
T KOG1479|consen 316 IPVLLRLLFIPLFLLCNYPPLPVVFES-DGWFIFLMSLLGLSNGYLTS-LIMMYAPKQVKPSEKEAAGNLM-VFFLVGGL 392 (406)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceecC-chHHHHHHHHHHhccchHhh-heehhcCCCCChHHHHHHHHHH-HHHHHHHH
Confidence 222112222222222211 0011122 23345677788999888887 7888888888877765444444 44444444
Q ss_pred hhHHHHHHH
Q 010744 420 FAAPLVGIL 428 (502)
Q Consensus 420 ~~~~~~g~l 428 (502)
....+.+++
T Consensus 393 ~~G~~~s~l 401 (406)
T KOG1479|consen 393 ALGSLLSWV 401 (406)
T ss_pred HHhhHHHHH
Confidence 333333443
No 263
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.97 E-value=0.019 Score=55.23 Aligned_cols=277 Identities=12% Similarity=0.051 Sum_probs=159.3
Q ss_pred hHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCC---CCCCchHHHHHHHH-HHhhhcchhhhhhhhcCCchhHHHHHH
Q 010744 39 ISLSLILINLAAIMERADENLLPSVYKEVSEAFNA---GPSDLGYLTFIRNF-VQGLSSPLAGVLVINYDRPAVLTIGIL 114 (502)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---s~~~~g~~~s~~~~-~~~~~~~~~G~l~dr~Grr~~l~~~~~ 114 (502)
.+..+..+.+..++..+..+. +-.+.+.+-+ +++.+.++-+..-+ ...+..++.+++.+++.+.+++-.-..
T Consensus 25 E~~kflpl~Ll~f~I~~ny~~----lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~ 100 (509)
T COG3202 25 ELKKFLPLALLFFCILFNYNL----LRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILG 100 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 444444455555555444433 3445565544 46667888888877 677888999999999999999988888
Q ss_pred HHHHHHHHHHhh---------hH-----------------------HHHHHHHHHHHhhhhhhhhh-hhHHHHhhccCCC
Q 010744 115 CWAFSTAAVGAS---------QH-----------------------FLHVGMWRAVNGFGLAIVIP-ALQSFIADSYKDG 161 (502)
Q Consensus 115 ~~~~~~~~~~~~---------~~-----------------------~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~ 161 (502)
.+....+++++. ++ .|...+.-++.=+-.+.... .-.....|.+..+
T Consensus 101 ~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~ 180 (509)
T COG3202 101 FFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIE 180 (509)
T ss_pred HHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 888888888763 11 12222333333332233333 4456678889889
Q ss_pred CcchhhhHHHHHHhhhhhHHHHHHHHHhhhcc-----cCcccchHHHHHHHHHHHHHHHHHHHhccC----CccccCCCC
Q 010744 162 VRGAGFGLLSLVGTMGGIGGGVLATIMAGHQF-----WGVPGWRCAFILMATLSVLIAFLVLVFVVD----PRKKASTFH 232 (502)
Q Consensus 162 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~-----~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 232 (502)
|-.|..++++.+.+++..++..+..++.++.. ..+..-+..+.+.+..++++..+.+++-+. |+......
T Consensus 181 eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~- 259 (509)
T COG3202 181 EAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAK- 259 (509)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHh-
Confidence 99999999999999999999999998876411 000123445555555555554444443222 22110000
Q ss_pred CCCCCCchhhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhhhhhhH--HHHHHHHHHhCCChhh---HHH
Q 010744 233 GTGENFDRDELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSLPWTAM--VFFTMWFELIGFDHSS---TAA 307 (502)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~s~~~---~~~ 307 (502)
.+++.+...-...+..+.+.++|.++.+.+...+........ .|-...-+.+-.+.+. .|.
T Consensus 260 --------------~kk~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~ 325 (509)
T COG3202 260 --------------KKKKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGR 325 (509)
T ss_pred --------------cccccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHH
Confidence 000001111123455666778888877777766665555544 3433332222222222 223
Q ss_pred HHHHHHhh-hcccccchhhhhhhhcccc
Q 010744 308 LLSLFAIG-CAVGSFLGGVVADRISQAY 334 (502)
Q Consensus 308 ~~~~~~~~-~~~~~~~~g~l~d~~g~~~ 334 (502)
+....++. .++...+++.+.+|.|-..
T Consensus 326 ~~~~tgvv~~v~~~~~~s~~ir~~GW~~ 353 (509)
T COG3202 326 FQIWTGVVSLVVFLFPGSNLIRRVGWFT 353 (509)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHhhHHH
Confidence 33344444 3445567788888877554
No 264
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.95 E-value=0.00012 Score=71.45 Aligned_cols=125 Identities=15% Similarity=0.159 Sum_probs=112.7
Q ss_pred HHHhhcCCCCCCchHHHHHHHHHHhhhcchhh-hhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhh
Q 010744 66 EVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAG-VLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNGFGLA 144 (502)
Q Consensus 66 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G-~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 144 (502)
.....++++..+.+.+.+.......+++++.. .+...+|-|+++..|++.-.+..++.+++++.|+++...++.++. .
T Consensus 267 yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~-~ 345 (463)
T KOG2816|consen 267 YLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALA-G 345 (463)
T ss_pred EEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhh-c
Confidence 45567899999999999988888888888777 778889999999999999999999999999999999998888886 7
Q ss_pred hhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhh
Q 010744 145 IVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGH 191 (502)
Q Consensus 145 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~ 191 (502)
...|...+.++.+.+++++|++.++.+..-.+..+++|.+-+.+...
T Consensus 346 ~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~ 392 (463)
T KOG2816|consen 346 IVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFAL 392 (463)
T ss_pred chhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHH
Confidence 78899999999999999999999999999999999999988777543
No 265
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.87 E-value=0.00012 Score=70.68 Aligned_cols=107 Identities=18% Similarity=0.234 Sum_probs=86.7
Q ss_pred hhHHHHHHHHHHHHHHHHhhh---------HHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCC---CcchhhhHHHHHH
Q 010744 107 AVLTIGILCWAFSTAAVGASQ---------HFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDG---VRGAGFGLLSLVG 174 (502)
Q Consensus 107 ~~l~~~~~~~~~~~~~~~~~~---------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 174 (502)
|++.++.+++.+|.++..++. +.+.++++-.+.++|.|+.-|...++++|.++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 578889999999998855542 2357889999999999999999999999999775 4667888999999
Q ss_pred hhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHH
Q 010744 175 TMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVL 218 (502)
Q Consensus 175 ~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~ 218 (502)
++|..++..+.+++-+. .+|.+.|.+.++..++..+..+
T Consensus 82 n~G~~~~~~~~~~i~~~-----~~~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQN-----YGWFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHHHHHHHCCCHHHHC-----S-HHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhcccchhhccc-----cchhhhhhHHHHHHHHHHHHHH
Confidence 99999999999999887 8999999998877665555444
No 266
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.74 E-value=0.00078 Score=59.05 Aligned_cols=244 Identities=11% Similarity=0.042 Sum_probs=110.9
Q ss_pred CCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHHHhccCCccccCCCCCCCCCCch
Q 010744 161 GVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKASTFHGTGENFDR 240 (502)
Q Consensus 161 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (502)
|+|+..+.+...+.++|.++....--.-.+........|++.+.+.+++.++-+++..++-++- +....++++++..
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~f--d~~~~~~k~~k~~- 78 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNF--DIYSPKEKQEKEN- 78 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--cccCccccccccc-
Confidence 6777778888888888887764432111010001124699999999988877777666653331 1111100000000
Q ss_pred hhHhhhcCCCcchhHHHhHHHHhhhcchhHHHHHHHHHHhhhh--hhhhH-HHHHHHHHH--hCCC----h----hhHHH
Q 010744 241 DELVEKGNTSVSSVWLESWMATKAVIKVPTFQIIVLQGIVGSL--PWTAM-VFFTMWFEL--IGFD----H----SSTAA 307 (502)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~--~g~s----~----~~~~~ 307 (502)
.+ .+......+.+|++.-|...+....... .+... .+....... .+.+ . .....
T Consensus 79 ------------~~-~~~~~s~~~~LK~K~tw~w~~~Yg~wLv~~V~p~t~~~~~~~~~~s~~ni~~~~~~~~~~~~~~~ 145 (267)
T PF07672_consen 79 ------------ST-LSKKPSYKSILKEKETWKWILIYGIWLVVVVFPFTPSWFNILIWISPANIKSVVSGGGFNWIIPI 145 (267)
T ss_pred ------------cc-ccccchHHHHHccchHHHHHHHHHHHheeEEEeccchhHhHhhhcCcccccccccccccchhhHH
Confidence 00 0011344557777766665554433222 12111 222222222 1111 1 11223
Q ss_pred HHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhh--hhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhh
Q 010744 308 LLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQF--SAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWN 385 (502)
Q Consensus 308 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 385 (502)
....+..+..+|.+..|...+.--+||.. ..++. +++............-...........+..++.|++.=..
T Consensus 146 ~~I~fv~g~~~G~~~ig~~nkt~~kRk~f----i~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~Wgi 221 (267)
T PF07672_consen 146 FQILFVAGYFLGPFTIGLWNKTNYKRKPF----IHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGI 221 (267)
T ss_pred HHHHHHHHHhhhceeeccchhhhhhhhhH----HHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhh
Confidence 33444555567777788887755445432 22222 2222222111111111111112334455555666554333
Q ss_pred ccCCCccchhcc--cCCCchhhHHHHHHHhhhhhhhhhHHHH
Q 010744 386 ATAANGPMFAEV--VPAKHRTMIYAFDRAFEGSFSSFAAPLV 425 (502)
Q Consensus 386 ~~~~~~~~~~~~--~p~~~~~~~~g~~~~~~~~~~~~~~~~~ 425 (502)
.+ +....-.|. ..|++.|.-.|....++++.-.+.-.+.
T Consensus 222 Q~-ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~yTi~~Ii~ 262 (267)
T PF07672_consen 222 QG-VILNLPHEYKGYNPKKIGIQFGLIWGFGYIFYTIYDIIL 262 (267)
T ss_pred hH-HHhcChhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHH
Confidence 33 334444442 2345567777777776665555444443
No 267
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.70 E-value=5.6e-05 Score=53.60 Aligned_cols=56 Identities=14% Similarity=0.206 Sum_probs=48.6
Q ss_pred hhhhhhhhH-HHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccC
Q 010744 280 VGSLPWTAM-VFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYP 335 (502)
Q Consensus 280 ~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~ 335 (502)
+.++..+.. -|+|.|+++.|+|+.++|.+.++..+..+++.+++|+++||.++++.
T Consensus 11 ~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~ 67 (77)
T PF12832_consen 11 FYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKV 67 (77)
T ss_pred HHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHH
Confidence 334444444 68999999999999999999999999999999999999999999884
No 268
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.65 E-value=0.0017 Score=60.07 Aligned_cols=122 Identities=23% Similarity=0.209 Sum_probs=70.5
Q ss_pred HHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHH
Q 010744 296 ELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTL 375 (502)
Q Consensus 296 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (502)
+++|++..+++.++........+...+.|.++||+|||+. ++ +.++.-...++ .-.. +....+.+.=
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~-------cl---~~cily~~scl--~k~~-~~~~~L~~GR 128 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKA-------CL---LFCILYSLSCL--TKHS-SNYPVLLLGR 128 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHH-------HH---HHHHHHHHHHH--HHhc-cccHHHHHHH
Confidence 5799999999999999999999999999999999999982 11 11111111111 1122 2355566777
Q ss_pred HHHHHHHhhhccCCCc-cchhcc----cCCCchhhHHHHHHHhhh-hhhhhhHHHHHHHHHH
Q 010744 376 VLMGLTISWNATAANG-PMFAEV----VPAKHRTMIYAFDRAFEG-SFSSFAAPLVGILSEK 431 (502)
Q Consensus 376 ~~~g~~~~~~~~~~~~-~~~~~~----~p~~~~~~~~g~~~~~~~-~~~~~~~~~~g~l~~~ 431 (502)
++.|++...... ..- -++.|. +|++..+...+......+ +....+..++-.+.+.
T Consensus 129 vlgGiaTSLLfS-~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~ 189 (354)
T PF05631_consen 129 VLGGIATSLLFS-AFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADW 189 (354)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHH
Confidence 778887776655 222 344554 333333444443332222 2233333444444454
No 269
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.61 E-value=0.00093 Score=68.53 Aligned_cols=141 Identities=16% Similarity=0.207 Sum_probs=90.5
Q ss_pred hhhHHHHHHHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhh-hccccCCcchhHHhhhhhhhhhhHHHHHhh-hc
Q 010744 285 WTAMVFFTMWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADR-ISQAYPHSGRVMCAQFSAFMGIPFSWFLLT-AI 361 (502)
Q Consensus 285 ~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 361 (502)
++....+..|+.+ +|++...+..+...+....-+..+++|+++|+ +|+++.. ..+.++..+...+..+ ..
T Consensus 4 YGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tI-------l~~~ii~~lG~~llai~a~ 76 (654)
T TIGR00926 4 YGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTI-------LYLSIVYVVGHALLSFGAI 76 (654)
T ss_pred eecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH-------HHHHHHHHHHHHHHHhccC
Confidence 3444556666665 89998888888777777777778899999996 5666531 1111111111111111 11
Q ss_pred cCC--cchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCC---chhhHHHHHHHhhhhhhhhhHHHHHHHHHHhc
Q 010744 362 PQS--VSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAK---HRTMIYAFDRAFEGSFSSFAAPLVGILSEKMF 433 (502)
Q Consensus 362 ~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~---~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~ 433 (502)
+.. ........+.+.+...|.+..-+ ...+...|.++++ .+-....+.....++|+.+++.+.+++.+..+
T Consensus 77 ~~~~~~~~~~~~l~gLaLia~G~GgiKp-~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~ 152 (654)
T TIGR00926 77 PSSGHPLHDLLDLLGLALIALGTGGIKP-CVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVG 152 (654)
T ss_pred cccccchHHHHHHHHHHHHHhhcccccc-CchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 111 11122344566677777787777 7788888877653 36678888888999999999999999886643
No 270
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.59 E-value=0.0049 Score=60.28 Aligned_cols=115 Identities=14% Similarity=0.044 Sum_probs=65.2
Q ss_pred hHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhc----c-CCcchhHHHHHHHHHH
Q 010744 304 STAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAI----P-QSVSNYYTYAVTLVLM 378 (502)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~ 378 (502)
..-.+...+.++..+|+.+..+..- -++|... +....+.=++.++...++..-. + .-++ -+...+..+++
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~~~-p~~~~~~---l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~-d~~~~~~~~l~ 382 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKFMW-PDEDSRW---LPILSFLRVLFIPLFLLCNYPQRSRLPVFFPG-DAYFIILMLLF 382 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeEe-eCCCccc---hHHHHHHHHHHHHHHHHhcCCccccCCeeecc-cHHHHHHHHHH
Confidence 3445667789999999986654321 1122111 1222222222222222221110 0 0112 23455678889
Q ss_pred HHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHH
Q 010744 379 GLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPL 424 (502)
Q Consensus 379 g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~ 424 (502)
|+..|.... ....+..+..++++|..+..+...+-.+|-.+|..+
T Consensus 383 gltnGy~~s-~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 383 GFSNGYLGS-LSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHhhhHHHH-HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998887 677778888888888777777777766666666654
No 271
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.38 E-value=0.0022 Score=57.38 Aligned_cols=144 Identities=12% Similarity=0.026 Sum_probs=98.6
Q ss_pred chHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhc
Q 010744 78 LGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADS 157 (502)
Q Consensus 78 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 157 (502)
.|.+.-+-.+...+..+....+.||+---.=+.+..++.+.+.++.++++|.++=+.+-.+..++.|.....-.++-+.+
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~Y 143 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSRY 143 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhccC
Confidence 45555555666667777777788886555545666778888999999999999999998999998887766655544433
Q ss_pred cCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHHHHhccCCccccC
Q 010744 158 YKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLVLVFVVDPRKKAS 229 (502)
Q Consensus 158 ~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (502)
.....+.++.+.+..+++|..-=..+.+. -...-|.+.++...+.++.+...++..++|+....
T Consensus 144 -----~~~~i~~WSSGTGgAGliGa~SYa~lT~~---~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~~~ 207 (409)
T KOG3880|consen 144 -----PSIVIAGWSSGTGGAGLIGASSYAFLTSW---ANLSPKSTLLIMLFLPALFAFAYFFLLKSPESVYS 207 (409)
T ss_pred -----CCceeccccCCCCcchhhhhhHHHHHhhh---cCCChhhHHHHHHHHHHHHHHHHHheeCCCccccC
Confidence 22344555555555555555433344432 12567888999888888888888888887765543
No 272
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.33 E-value=0.0034 Score=59.51 Aligned_cols=131 Identities=11% Similarity=0.053 Sum_probs=82.4
Q ss_pred HHHHH-hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhh-hccCCcchhH-
Q 010744 293 MWFEL-IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLT-AIPQSVSNYY- 369 (502)
Q Consensus 293 ~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~- 369 (502)
.+.++ +| +...+-+...++.+..++..+.+-|+.||+|-|... .++...-.+...+=.. ..+..++..+
T Consensus 69 n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~-------llgt~ln~iGa~Ir~iss~p~v~~~f~~ 140 (480)
T KOG2563|consen 69 NYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTAL-------LLGTVLNGIGAWIRLISSLPFVPPLFRR 140 (480)
T ss_pred HHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHH-------HHHHHHHHHHHHHhhhccCccccccchh
Confidence 34454 67 666677777788899999999999999999998632 1112221111111111 1222223333
Q ss_pred -HHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 370 -TYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 370 -~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
+......+.+...-.... +..-...-.+|+++|+++..+....+.+|.+++..+...+..+.
T Consensus 141 ~l~~~Gq~iaa~Aq~Fim~-lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 141 PLTHTGQSIAAAAQPFILG-LPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred hhhHHhHHHHHHhhhHhhc-cccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 444555555555444433 22233444689999999999999999999999988888777663
No 273
>PRK03612 spermidine synthase; Provisional
Probab=97.32 E-value=0.015 Score=58.25 Aligned_cols=122 Identities=15% Similarity=0.162 Sum_probs=76.5
Q ss_pred HHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHH--H-HHHHHHH----HhhhHH-HHHHHHHHH
Q 010744 67 VSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILC--W-AFSTAAV----GASQHF-LHVGMWRAV 138 (502)
Q Consensus 67 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~--~-~~~~~~~----~~~~~~-~~l~~~r~l 138 (502)
+..-+|-+..+.+.+.+++++|.++|+..++++.++.-++.. .+-+.+ . +++..+. ++.... ..++..-++
T Consensus 41 l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 119 (521)
T PRK03612 41 ASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLL 119 (521)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334467778888999999999999999999888744333222 111111 1 1111111 111111 123344566
Q ss_pred HhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhh
Q 010744 139 NGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAG 190 (502)
Q Consensus 139 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 190 (502)
.++..|+..|....+..+.. .++-++..|-......+|.++|.++.+++.-
T Consensus 120 ~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 120 IGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 78888888888777666543 2345677888888899999999988877653
No 274
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.21 E-value=0.0044 Score=58.96 Aligned_cols=112 Identities=10% Similarity=0.013 Sum_probs=82.9
Q ss_pred CCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHH--HH---HHHHHHhhhHHHHHHHHHHHHhhhhhhhhh
Q 010744 74 GPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCW--AF---STAAVGASQHFLHVGMWRAVNGFGLAIVIP 148 (502)
Q Consensus 74 s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~--~~---~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 148 (502)
..++..+...+|.+|-.++.--...+ |+ |++.+.+.+-. .+ .....-+.+|.|..++.-+..|+..|..++
T Consensus 279 ~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YV 354 (402)
T PF02487_consen 279 PRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYV 354 (402)
T ss_pred HHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHH
Confidence 34567777888888777665432221 33 44443333322 22 222333468999999999999999999999
Q ss_pred hhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHh
Q 010744 149 ALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMA 189 (502)
Q Consensus 149 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~ 189 (502)
.+...+.|-.++++|..++|..+.+.++|..++.+++-.+-
T Consensus 355 NtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 355 NTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999887663
No 275
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.07 E-value=8e-05 Score=74.69 Aligned_cols=144 Identities=12% Similarity=0.073 Sum_probs=2.6
Q ss_pred HHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhh-hhhHHHHHhh----------
Q 010744 291 FTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFM-GIPFSWFLLT---------- 359 (502)
Q Consensus 291 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---------- 359 (502)
++.+=++++++..+.|++.+..-++.++..++..++.+|..|.|.+..+..++.++.++ +++=....-.
T Consensus 26 lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~ 105 (539)
T PF03137_consen 26 LTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNG 105 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccc
Confidence 44444459999999999999999999999999999988865544332222222222111 1111100000
Q ss_pred -------hc--------------------cCCcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHH
Q 010744 360 -------AI--------------------PQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRA 412 (502)
Q Consensus 360 -------~~--------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~ 412 (502)
.. ......+.++++..++.|+|....++ +-.+|+-|.+++++.+...|+...
T Consensus 106 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~t-LG~tYiDDnv~~~~splYiGi~~~ 184 (539)
T PF03137_consen 106 NSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYT-LGITYIDDNVSKKNSPLYIGILYA 184 (539)
T ss_dssp ----------------------------------------------SSS-------------------------------
T ss_pred ccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCcc-ceeeeeccccccccCccchhhhhH
Confidence 00 00001245566777888888888888 889999999999999999999988
Q ss_pred hhhhhhhhhHHHHHHHHHHhcCC
Q 010744 413 FEGSFSSFAAPLVGILSEKMFGY 435 (502)
Q Consensus 413 ~~~~~~~~~~~~~g~l~~~~~~~ 435 (502)
...+|-++|-.+++...+..-++
T Consensus 185 ~~~lGPa~Gf~lg~~~L~~yvD~ 207 (539)
T PF03137_consen 185 MSILGPALGFLLGSFCLRIYVDF 207 (539)
T ss_dssp -----------------------
T ss_pred HhhccHHHHHHHHHHHHhceeCC
Confidence 88888888888888777654333
No 276
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.94 E-value=0.016 Score=56.26 Aligned_cols=146 Identities=14% Similarity=0.009 Sum_probs=106.2
Q ss_pred HHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHH
Q 010744 43 LILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAA 122 (502)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 122 (502)
++...++..+-++..-.+......+.+.-|.++..+|..-+...+....+.+...++.+|+|..|.=.+++....+...+
T Consensus 260 vflas~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~ 339 (432)
T PF06963_consen 260 VFLASFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLAL 339 (432)
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHH
Confidence 34444444444554445566666666667999999999999999999999999999999999999877777655444433
Q ss_pred HHh------hh----HHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHH
Q 010744 123 VGA------SQ----HFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIM 188 (502)
Q Consensus 123 ~~~------~~----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 188 (502)
+.. .+ +...++.+-++.=+|.=++..+..-++.|..|+++||...|...+..++--++-..++-.+
T Consensus 340 ~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~ 415 (432)
T PF06963_consen 340 CVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIF 415 (432)
T ss_pred HHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 332 12 3334444444444555566778888999999999999999999999888888777665443
No 277
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.86 E-value=0.0037 Score=61.39 Aligned_cols=153 Identities=12% Similarity=0.069 Sum_probs=111.0
Q ss_pred CCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHh----------hhHHHHHHHHHHHHhhh
Q 010744 73 AGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGA----------SQHFLHVGMWRAVNGFG 142 (502)
Q Consensus 73 ~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~----------~~~~~~l~~~r~l~G~~ 142 (502)
.++...+.+..+..++..++..+..+..-+..-|+++..+.++.++..+.-.. .++.+-.+.--++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 67778888888888888899999988888889999998888887776654221 12222233445666777
Q ss_pred hhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhccc---CcccchHHHHHHHHHHHHHHHHHHH
Q 010744 143 LAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFW---GVPGWRCAFILMATLSVLIAFLVLV 219 (502)
Q Consensus 143 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~---~~~~wr~~f~~~~~~~~~~~~~~~~ 219 (502)
....+.....+++|..|+..-|...++..+..++|..++..++..+.+..+- +..+-.+..++..+..++...+..+
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~l 411 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFL 411 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 7777778889999999999999999999999999999999999998876331 1122334445555555444445555
Q ss_pred hccCCc
Q 010744 220 FVVDPR 225 (502)
Q Consensus 220 ~~~~~~ 225 (502)
+||+.+
T Consensus 412 Lp~~~~ 417 (433)
T PF03092_consen 412 LPPQKR 417 (433)
T ss_pred cCCCch
Confidence 666444
No 278
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=96.77 E-value=0.19 Score=45.83 Aligned_cols=99 Identities=12% Similarity=0.104 Sum_probs=64.3
Q ss_pred HHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccC--CCCc-
Q 010744 87 FVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYK--DGVR- 163 (502)
Q Consensus 87 ~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~--~~~r- 163 (502)
+..+.++++.+.+..++|-|+++.++...+...-.. -+-+.+..++-+-.+.|++.+..+..--+++++.-. .++|
T Consensus 69 ~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~-Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~ 147 (390)
T KOG3097|consen 69 LSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAA-NLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRG 147 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh-hcchhHHhhccHHHhhccccccccccCcceecHHHHHHHHhhh
Confidence 334455566668999999999999988877654332 234677888999999999999888766666655442 2334
Q ss_pred --------chhhhHHHHHHhhhhhHHHHHHH
Q 010744 164 --------GAGFGLLSLVGTMGGIGGGVLAT 186 (502)
Q Consensus 164 --------~~~~~~~~~~~~~G~~~g~~~~~ 186 (502)
.+..+.+...+.-+...|..++.
T Consensus 148 ~q~~~~~~~~ffg~Ffii~~~~qv~gn~iss 178 (390)
T KOG3097|consen 148 EQAGDGMKVRFFGEFFIIFQCAQVWGNLISS 178 (390)
T ss_pred hhccCceeeeehhHHHHHHHHHHHHHHHHHH
Confidence 34555555444444444444333
No 279
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.65 E-value=0.02 Score=58.39 Aligned_cols=184 Identities=8% Similarity=-0.021 Sum_probs=114.2
Q ss_pred HhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHH-------hh-----hcc--
Q 010744 297 LIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFL-------LT-----AIP-- 362 (502)
Q Consensus 297 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-----~~~-- 362 (502)
.++++..+.|++.+.+-++..+......+...|..|.+.+..+...+.++.++...--.+. -. ..+
T Consensus 126 RF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~ 205 (735)
T KOG3626|consen 126 RFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSS 205 (735)
T ss_pred hcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCcc
Confidence 3899999999999999999999888888888888776654433333333222221110000 00 000
Q ss_pred -------------------------C-CcchhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhh
Q 010744 363 -------------------------Q-SVSNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGS 416 (502)
Q Consensus 363 -------------------------~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~ 416 (502)
. ....+.++++..++.|+|....++ +-.+|+-|.+.+++.+...|+..++..+
T Consensus 206 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t-lGisYiDDnvk~~~SplYlgi~~~~~~l 284 (735)
T KOG3626|consen 206 SLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT-LGISYIDDNVKKKNSPLYLGILYSMAIL 284 (735)
T ss_pred ccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc-CCCccccccccccCCcHHHHHHHHHHHh
Confidence 0 001345677888888999888888 8899999999999999999999998888
Q ss_pred hhhhhHHHHHHHHHHhcCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh
Q 010744 417 FSSFAAPLVGILSEKMFGYDSKAIDPVMGSPREALALSRGLLSMMAVPFGLCCLFYTPLYKIFKRD 482 (502)
Q Consensus 417 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (502)
|=++|-.+++.+.....++. ......+.+....-|-+|.-|++.....++..+.++.+.+..++.
T Consensus 285 GPaiGfllgS~~l~lYvD~~-~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~ 349 (735)
T KOG3626|consen 285 GPAIGFLLGSFCLKLYVDFG-LSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKS 349 (735)
T ss_pred hhHHHHHHHHHHHHeeeccc-cCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCccc
Confidence 88888888888877655441 111111112222333333333344444455555555565555543
No 280
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.58 E-value=0.054 Score=52.70 Aligned_cols=101 Identities=16% Similarity=0.167 Sum_probs=79.1
Q ss_pred HHHhhhcchhhhhhh---hcCCchhHHHHHHHHHHHHHHHHhh------------------hHHHHHHHHHHHHhhhhhh
Q 010744 87 FVQGLSSPLAGVLVI---NYDRPAVLTIGILCWAFSTAAVGAS------------------QHFLHVGMWRAVNGFGLAI 145 (502)
Q Consensus 87 ~~~~~~~~~~G~l~d---r~Grr~~l~~~~~~~~~~~~~~~~~------------------~~~~~l~~~r~l~G~~~~~ 145 (502)
++..++..+.+.+.+ ++||++.+.++..+..++.++.-.. +++...++.-++.|++.+.
T Consensus 290 ~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~ 369 (461)
T KOG3098|consen 290 LGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDAC 369 (461)
T ss_pred HHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHH
Confidence 444445555666664 6899999999999988888776542 2466778888999999999
Q ss_pred hhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHH
Q 010744 146 VIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIM 188 (502)
Q Consensus 146 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 188 (502)
.....+.++.+.+ +++|..+.++...-..++..++-......
T Consensus 370 ~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 370 FNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred HHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 9999999999999 88999999999888888877766555444
No 281
>PRK03612 spermidine synthase; Provisional
Probab=96.47 E-value=0.078 Score=53.27 Aligned_cols=127 Identities=13% Similarity=0.088 Sum_probs=68.5
Q ss_pred hCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHH
Q 010744 298 IGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVL 377 (502)
Q Consensus 298 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (502)
+|-+....+.+.+.+.++..+|+.+++++.++..++.. ..-..++. ++.....+...................+.
T Consensus 45 ~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~----~~e~~i~l-~~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 119 (521)
T PRK03612 45 LGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV----AVELLLAL-LGGLSALILYAAFAFQGLSRLLLYVLVLL 119 (521)
T ss_pred hCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH----HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67787788888888877777787777776533222211 00001111 11111111111111111111223344455
Q ss_pred HHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHH
Q 010744 378 MGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEK 431 (502)
Q Consensus 378 ~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~ 431 (502)
.++..|...| +..-+..+ ...+..+...|-......+|+.+|.++.+.+.--
T Consensus 120 ~~~l~G~~~P-l~~~~~~~-~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp 171 (521)
T PRK03612 120 IGLLIGMEIP-LLMRILQR-IRDQHLGHNVATVLAADYLGALVGGLAFPFLLLP 171 (521)
T ss_pred HHHHHHHHHH-HHHHHHHh-ccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHH
Confidence 6677777666 44443333 2223456778888899999999999998887753
No 282
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=96.33 E-value=0.033 Score=51.51 Aligned_cols=164 Identities=10% Similarity=0.044 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHhhhhchhhHHHHHhhcCCCC-CCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHH
Q 010744 44 ILINLAAIMERADENLLPSVYKEVSEAFNAGP-SDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAA 122 (502)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~-~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 122 (502)
+.+.+++++.....-...........+++-+. ...+.-.-.-.....+..++.|...|+..|+|++...+++--++..+
T Consensus 30 i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~v 109 (503)
T KOG2601|consen 30 IFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIV 109 (503)
T ss_pred ehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHH
Confidence 45667777777766677777777777776433 23333333444556677788899999999999988877665444333
Q ss_pred HH------hh------hHHHHHHHHHHHHhhhhhh--hhhhhHH--HHhhcc----CCCCcchh---hhHHHHHHhhhhh
Q 010744 123 VG------AS------QHFLHVGMWRAVNGFGLAI--VIPALQS--FIADSY----KDGVRGAG---FGLLSLVGTMGGI 179 (502)
Q Consensus 123 ~~------~~------~~~~~l~~~r~l~G~~~~~--~~~~~~~--~i~~~~----~~~~r~~~---~~~~~~~~~~G~~ 179 (502)
++ +. .++.++..+-++.-...+. ....+.+ .-.||. ..+.+... .+..-..-..-..
T Consensus 110 agglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~ 189 (503)
T KOG2601|consen 110 AGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNL 189 (503)
T ss_pred HHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhc
Confidence 32 22 2444444443333222111 1111112 224554 23333333 3555555666778
Q ss_pred HHHHHHHHHhhhcccCcccchHHHHHHHHHHHH
Q 010744 180 GGGVLATIMAGHQFWGVPGWRCAFILMATLSVL 212 (502)
Q Consensus 180 ~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~ 212 (502)
+.|.+.+.+... .+-|..-.+.++-.++
T Consensus 190 Lapv~tg~Iitf-----vsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 190 LAPVITGLIITF-----VSLRASAGTFAAWALV 217 (503)
T ss_pred hhhhhhccccee-----echhhhhhhhHHHHHH
Confidence 899999998876 6666655444444444
No 283
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.18 E-value=0.008 Score=57.15 Aligned_cols=133 Identities=11% Similarity=0.102 Sum_probs=82.4
Q ss_pred HHHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhh----hccccCCcchhHHhhhhhhhhhhHHHHHh-----
Q 010744 288 MVFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADR----ISQAYPHSGRVMCAQFSAFMGIPFSWFLL----- 358 (502)
Q Consensus 288 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 358 (502)
.+|+|.|+++.|.+....+.+.....+.+++.+++.|..+|| +||||+.+ ...+..+.+.+..+.+
T Consensus 52 lsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI-----~~~s~~i~~~l~Lig~aaDig 126 (498)
T KOG0637|consen 52 LSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFI-----LAGSLLIAVSLFLIGYAADIG 126 (498)
T ss_pred hccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchH-----HHhhHHHHHHHhhhhhHhhhh
Confidence 378999999999999888888888889999999999999996 58888742 1111111111111111
Q ss_pred -hhccCCcchhHHHHHHHHHHH-----HHHhhhccCCCccchhcccCCCchhh-HHHHHHHhhhhhhhhhHHHHH
Q 010744 359 -TAIPQSVSNYYTYAVTLVLMG-----LTISWNATAANGPMFAEVVPAKHRTM-IYAFDRAFEGSFSSFAAPLVG 426 (502)
Q Consensus 359 -~~~~~~~~~~~~~~~~~~~~g-----~~~~~~~~~~~~~~~~~~~p~~~~~~-~~g~~~~~~~~~~~~~~~~~g 426 (502)
..............+.+++.| +....... ..-++..|+..++++.+ +++....+..+|+.+|-.+.+
T Consensus 127 ~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qg-p~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 127 LLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQG-PCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred HHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhh-hHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 111111110111223333333 33434444 25678888877766666 999998888888887766554
No 284
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.17 E-value=0.082 Score=52.02 Aligned_cols=43 Identities=9% Similarity=-0.018 Sum_probs=38.0
Q ss_pred CCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHH
Q 010744 389 ANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEK 431 (502)
Q Consensus 389 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~ 431 (502)
+.+++++|.+..++..+-.++....+++|..+++.+..++.+.
T Consensus 149 lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~ 191 (472)
T TIGR00769 149 LFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKL 191 (472)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4678899999999999999999999999999999988887754
No 285
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=95.80 E-value=0.12 Score=47.73 Aligned_cols=132 Identities=18% Similarity=0.228 Sum_probs=83.6
Q ss_pred HHHHHHHHHhCCCh--hhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcc
Q 010744 289 VFFTMWFELIGFDH--SSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVS 366 (502)
Q Consensus 289 ~~~~~~~~~~g~s~--~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (502)
...+.+..+.+.+. ...++......+...++.+..|.+.||.|||+.. .. +... .....+....... .
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~-----~~--~~~~-~~~~~~~~~~~~~--~ 92 (338)
T COG0477 23 PALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVL-----II--GLLL-FLLGTLLLALAPN--V 92 (338)
T ss_pred HHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHH-----HH--HHHH-HHHHHHHHHhCcc--c
Confidence 34555666655554 4678888888888888889999999999888421 11 1111 0111111111111 2
Q ss_pred hhHHHHHHHHHHHHHHhhhccCCCccchhcccCC-CchhhHHHHHHH-hhhhhhhhhHHHHHHHHHH
Q 010744 367 NYYTYAVTLVLMGLTISWNATAANGPMFAEVVPA-KHRTMIYAFDRA-FEGSFSSFAAPLVGILSEK 431 (502)
Q Consensus 367 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~-~~~~~~~g~~~~-~~~~~~~~~~~~~g~l~~~ 431 (502)
....+.......|++.+...+ ....+..|..|. +.|+...+.... ....+..++|.+.+.+.+.
T Consensus 93 ~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 93 GLALLLILRLLQGLGGGGLLP-VASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred hHHHHHHHHHHHHhhhHHHHH-HHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233344444446777776666 678889998887 578888888887 5667777888777777665
No 286
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=95.63 E-value=0.0021 Score=60.09 Aligned_cols=112 Identities=18% Similarity=0.171 Sum_probs=3.1
Q ss_pred HHHHHHHhhhcccccchhhhhhhh-ccccCCcchhHHhhhhhhhhhhHHHHHhhh-----ccCCcchhHHHHHHHHHHHH
Q 010744 307 ALLSLFAIGCAVGSFLGGVVADRI-SQAYPHSGRVMCAQFSAFMGIPFSWFLLTA-----IPQSVSNYYTYAVTLVLMGL 380 (502)
Q Consensus 307 ~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~ 380 (502)
.++..+.++..+|+.+.++..-+. .+|+. ......=++.++...++-.. .+..-.+-+..++..+++|+
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l-----~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~ 260 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWL-----WILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGF 260 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccH-----HHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHH
Confidence 345678999999999887643221 22221 11111111112222222111 00000112335567888999
Q ss_pred HHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHH
Q 010744 381 TISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPL 424 (502)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~ 424 (502)
..|...+ ..+.+..+..++++|..+-.+....-..|-.+|..+
T Consensus 261 TNGyl~t-l~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 261 TNGYLST-LAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp ------H-HHH---------------------------------
T ss_pred ccchhhh-ceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888 778888888888888777777766666666666554
No 287
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=95.46 E-value=0.16 Score=41.60 Aligned_cols=108 Identities=12% Similarity=0.101 Sum_probs=72.4
Q ss_pred HHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccC
Q 010744 309 LSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATA 388 (502)
Q Consensus 309 ~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 388 (502)
.++......+..++.+.+.+++|.|+. +.++.+ ...+..... ..+ ..+.++....+.|++.+....
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~lg~K~s-------m~lg~~----~y~~y~~~~-~~~-~~~~l~~~s~l~G~~~a~lW~- 108 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKLGPKWS-------MILGSL----GYAIYIASF-FYP-NSYTLYPASALLGFGAALLWT- 108 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhHHH-------HHHHHH----HHHHHHHHH-Hhh-hHHHHHHHHHHHhhhhHHhhH-
Confidence 344455566677788899999999873 112111 111111111 122 245567788889999888888
Q ss_pred CCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHH
Q 010744 389 ANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSE 430 (502)
Q Consensus 389 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~ 430 (502)
....++.+...++.+++-.++...+.+.+..+|..+.-.+.+
T Consensus 109 aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 109 AQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred hhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 677888888888999999999999988887777776554443
No 288
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=94.72 E-value=0.28 Score=47.06 Aligned_cols=129 Identities=13% Similarity=0.042 Sum_probs=81.7
Q ss_pred HHHHHHHHH--hCCChhhHHHHHHHH-HhhhcccccchhhhhhhhccccCCcchhHHhhhhhhhhhhHHHHHhhhccCCc
Q 010744 289 VFFTMWFEL--IGFDHSSTAALLSLF-AIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQSV 365 (502)
Q Consensus 289 ~~~~~~~~~--~g~s~~~~~~~~~~~-~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (502)
.|+..|+.+ .|++.++..--..+. .=..+...+....+.|.++.|.. .+...+..+..-.++++ .
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpv-------iil~~~~~i~t~~lll~----~- 91 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPV-------IILQALSYIITWLLLLF----G- 91 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHH-------HHHHHHHHHHHHHHHHH----H-
Confidence 466666654 899888765333332 33445555677889999988863 22222221111111111 2
Q ss_pred chhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHH
Q 010744 366 SNYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEK 431 (502)
Q Consensus 366 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~ 431 (502)
.....+-+.-+..|.+.+.-.. .++++=..+|+++--++.+......-+|..++..++-.+.+.
T Consensus 92 ~sv~~mq~~q~~yg~~~a~eva--y~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~ 155 (412)
T PF01770_consen 92 TSVLAMQLMQFFYGLATAAEVA--YYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSF 155 (412)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH--HHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2345566778888888776543 567777778888888999999888888888888877766664
No 289
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=94.07 E-value=0.085 Score=37.87 Aligned_cols=46 Identities=17% Similarity=0.148 Sum_probs=40.1
Q ss_pred HHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhhhhcccc
Q 010744 289 VFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAY 334 (502)
Q Consensus 289 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~ 334 (502)
-.+|...++.++|..+++++.+...++.++|.+...++.++.++++
T Consensus 13 plLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~ 58 (85)
T PF06779_consen 13 PLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRR 58 (85)
T ss_pred hHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHH
Confidence 4578888889999999999999999999999999999888755444
No 290
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=93.82 E-value=0.46 Score=44.56 Aligned_cols=67 Identities=10% Similarity=0.125 Sum_probs=45.0
Q ss_pred hHHHHHHHHHHhhhhhhhhHHHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchhhhhh-----hhccccCCc
Q 010744 269 PTFQIIVLQGIVGSLPWTAMVFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGGVVAD-----RISQAYPHS 337 (502)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d-----~~g~~~~~~ 337 (502)
+.+..++.....+...++...-.|.+++..|.|-.+.+.......=-. -.+++..+.| |+||||...
T Consensus 31 ~~illLl~LYllQGiP~GL~~~iP~lL~ak~vSyt~~a~fS~ay~P~s--LKllWaPiVDs~y~k~~GrrksWv 102 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIGAIPLLLQAKGVSYTSQAIFSFAYWPFS--LKLLWAPIVDSVYSKRFGRRKSWV 102 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhhhhHHHhcCCCcchhhhhhhhhhhhHHH--HHHHHHhhhHHHHHHhhcccccee
Confidence 555666666677777788778889999988888776665533222111 2356677777 999999753
No 291
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=93.19 E-value=1.3 Score=42.24 Aligned_cols=36 Identities=11% Similarity=0.107 Sum_probs=22.3
Q ss_pred hHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhh
Q 010744 368 YYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTM 405 (502)
Q Consensus 368 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~ 405 (502)
...........+.+.+.... ..+...++ +|++....
T Consensus 117 f~vt~~~vv~~~~a~a~~qg-s~~G~a~~-~P~~ytqa 152 (406)
T KOG1479|consen 117 FLVTLIIVVLLNLANAVVQG-SLYGLAGL-FPSEYTQA 152 (406)
T ss_pred HHHHHHHHHHHhhhhhhhcc-chhhhhhc-CCHHHHHH
Confidence 34455666667777777766 56666665 67665543
No 292
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=92.61 E-value=2.1 Score=42.14 Aligned_cols=110 Identities=11% Similarity=-0.009 Sum_probs=75.7
Q ss_pred hHHHHHHHHHHhhhcchhhhhhhhcCCc--hhHHHH--HHHHHHHHHHHHhh---------hHHHHHHHHHHHHhhhhhh
Q 010744 79 GYLTFIRNFVQGLSSPLAGVLVINYDRP--AVLTIG--ILCWAFSTAAVGAS---------QHFLHVGMWRAVNGFGLAI 145 (502)
Q Consensus 79 g~~~s~~~~~~~~~~~~~G~l~dr~Grr--~~l~~~--~~~~~~~~~~~~~~---------~~~~~l~~~r~l~G~~~~~ 145 (502)
-.....|.++-.+|..+..+.. .-++| ++.+.+ =+++....++|..- ++-+..++..++.|+..|-
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy 388 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGY 388 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhH
Confidence 3455777778777777554321 11223 333222 22233333444322 4556677779999999999
Q ss_pred hhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHh
Q 010744 146 VIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMA 189 (502)
Q Consensus 146 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~ 189 (502)
....+..+..+..++++|..+-.+...+..+|..+|..++-.+.
T Consensus 389 ~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~~ 432 (437)
T TIGR00939 389 LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLFV 432 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988875543
No 293
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=91.35 E-value=5.2 Score=39.90 Aligned_cols=42 Identities=12% Similarity=0.007 Sum_probs=36.5
Q ss_pred CCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHH
Q 010744 389 ANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSE 430 (502)
Q Consensus 389 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~ 430 (502)
+.+.+..|....++..+-+++.....+++..++..+..++.+
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357888899999999999999999999999988888887777
No 294
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=90.29 E-value=0.62 Score=44.92 Aligned_cols=63 Identities=14% Similarity=0.085 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHhhhccCCCccchhcccCCC---chhhHHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 369 YTYAVTLVLMGLTISWNATAANGPMFAEVVPAK---HRTMIYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 369 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~---~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
..+.+.+.+.++|.|..-+ ...++..|.++++ ++.+...+.....++|+.+++.+.+++.++.
T Consensus 34 ~~~~~gL~lia~G~G~~K~-ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~ 99 (372)
T PF00854_consen 34 GLFYIGLALIAVGTGGIKP-NISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNY 99 (372)
T ss_dssp CHHHHHHHHHHHHHHCCHH-HHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS
T ss_pred HHHHHHHHHHHhccccccc-cHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhcccc
Confidence 4566778888999998888 7888888888765 3566777788888999999999999998774
No 295
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=89.64 E-value=18 Score=33.89 Aligned_cols=94 Identities=14% Similarity=0.077 Sum_probs=64.3
Q ss_pred hHHHHHhhc-CCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHH-------HHHHHh--hhHHHHH
Q 010744 63 VYKEVSEAF-NAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFS-------TAAVGA--SQHFLHV 132 (502)
Q Consensus 63 ~~~~i~~~~-~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~-------~~~~~~--~~~~~~l 132 (502)
.+..++..+ |-+--|.+.+.+.|.....+|+...-++.|.--.-+.+..-+++..++ .+.+++ .++-+.+
T Consensus 29 al~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vl 108 (508)
T COG4262 29 ALGTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVL 108 (508)
T ss_pred HHHHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHH
Confidence 344455554 445678999999999999999999888887544333332222222221 112222 3577888
Q ss_pred HHHHHHHhhhhhhhhhhhHHHHhh
Q 010744 133 GMWRAVNGFGLAIVIPALQSFIAD 156 (502)
Q Consensus 133 ~~~r~l~G~~~~~~~~~~~~~i~~ 156 (502)
++.-++.|.-.|.-.|..+.++.+
T Consensus 109 y~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 109 YALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHH
Confidence 999999999999999999998877
No 296
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=89.13 E-value=5.1 Score=35.88 Aligned_cols=135 Identities=10% Similarity=-0.052 Sum_probs=87.1
Q ss_pred chHHHHHHHHHHhhhcchhhhhhhhcCCc--hhHHHHHHHHHHHHHHHHhhh-------HHHHHHHHHHHHhhhhhhhhh
Q 010744 78 LGYLTFIRNFVQGLSSPLAGVLVINYDRP--AVLTIGILCWAFSTAAVGASQ-------HFLHVGMWRAVNGFGLAIVIP 148 (502)
Q Consensus 78 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr--~~l~~~~~~~~~~~~~~~~~~-------~~~~l~~~r~l~G~~~~~~~~ 148 (502)
-|.+.+.+++..++|+-+..++..|-..| ..+.+..++..+...+..... +...=+++-++.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 58899999999999999998888876665 356666666555554443321 111123444555667788999
Q ss_pred hhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHH
Q 010744 149 ALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLV 217 (502)
Q Consensus 149 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~ 217 (502)
....+=+++.|++.|...+.++..-.++-..++- ...+......+=|..|-+..+...+..+..
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvL-----ynlh~~~~p~~tr~mf~icS~~~~~a~i~~ 427 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVL-----YNLHVDAFPTTTRNMFGICSAFLFVASILQ 427 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhh-----eecccccCccccchhhhhhHHHHHHHHHHH
Confidence 9999999999999999999988755443222211 111111112455677877776665554443
No 297
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=87.74 E-value=0.063 Score=47.02 Aligned_cols=63 Identities=13% Similarity=0.213 Sum_probs=40.2
Q ss_pred HHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhh---------hhhhcCCchhH
Q 010744 47 NLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGV---------LVINYDRPAVL 109 (502)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~---------l~dr~Grr~~l 109 (502)
.++.+.+....+..-..+-.+.++.+.++.....+.-+....-++..++.|. -.||+|||+..
T Consensus 23 GvGHmlNDitAScWFTYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830|consen 23 GVGHMLNDITASCWFTYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred chhHHHhhHHHHHHHHHHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeee
Confidence 3444444444444333344455677888887777777777777777777764 35799999853
No 298
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=83.58 E-value=4.2 Score=37.23 Aligned_cols=143 Identities=14% Similarity=0.059 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHhhhhchhhH--HHHHhhcCCC-CCCchHHHHHHHHHHhhhcchhhhhhhhcCCch---hHHHHHHHH
Q 010744 43 LILINLAAIMERADENLLPSVY--KEVSEAFNAG-PSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPA---VLTIGILCW 116 (502)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~s-~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~---~l~~~~~~~ 116 (502)
++-+++.++..++........+ |. .+.+..+ ..|.-|....|.+|-.+..--.-..--+ .-+ ++-.-.+++
T Consensus 253 MvPL~~VY~~EY~INQGl~ell~F~c-~~g~sls~~sqYRwyqvlYQlGVFiSRSS~~~~~~p--~l~~LailQ~vNl~f 329 (409)
T KOG3880|consen 253 MVPLALVYFAEYFINQGLAELLLFPC-SHGFSLSKDSQYRWYQVLYQLGVFISRSSINLFTMP--YLWLLAILQFVNLLF 329 (409)
T ss_pred HHHHHHHHHHHHHHhhhhHhhEEecc-ccCCccchhhcchhhheeeeeeEEEEeccceEEech--HHHHHHHHHHHHHHH
Confidence 3445555555554433332221 22 3444444 3468888888887765543322111111 111 122233444
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHH
Q 010744 117 AFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIM 188 (502)
Q Consensus 117 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 188 (502)
.+...+..+.+++|..++.-+.-|+-.|..++...--+.+-.++++|-.+++....+-++|..++..++-.+
T Consensus 330 f~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 330 FLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 555566677899999999999999998999998888888888999999999999999999998888776444
No 299
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=82.25 E-value=29 Score=34.23 Aligned_cols=43 Identities=9% Similarity=-0.011 Sum_probs=34.5
Q ss_pred CCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHHHH
Q 010744 389 ANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILSEK 431 (502)
Q Consensus 389 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~ 431 (502)
+.+....|....++..+-+++.+...+++..++..+..++.++
T Consensus 168 lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 168 LFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred HHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3466778888888889999999988888888777777777664
No 300
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=81.72 E-value=0.51 Score=44.10 Aligned_cols=108 Identities=12% Similarity=-0.013 Sum_probs=3.8
Q ss_pred HHHHHHHHHHhhhcchhhhhhhh-cCCchhHHHH--HHHHHHHHHHHH----------hhhHHHHHHHHHHHHhhhhhhh
Q 010744 80 YLTFIRNFVQGLSSPLAGVLVIN-YDRPAVLTIG--ILCWAFSTAAVG----------ASQHFLHVGMWRAVNGFGLAIV 146 (502)
Q Consensus 80 ~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~--~~~~~~~~~~~~----------~~~~~~~l~~~r~l~G~~~~~~ 146 (502)
.....|.++-.+|....++.-=+ ..+|++.+.+ =+++....++|. +-+|-+..++.-++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 34567888888888877763211 1344443321 122222222331 2245566778889999999999
Q ss_pred hhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHH
Q 010744 147 IPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATI 187 (502)
Q Consensus 147 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~ 187 (502)
...+..+..+..++++|..+-.+......+|..+|..++-.
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp -HHHH------------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888888888888888877643
No 301
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=79.57 E-value=41 Score=29.22 Aligned_cols=36 Identities=14% Similarity=0.098 Sum_probs=21.7
Q ss_pred hccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhh
Q 010744 156 DSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGH 191 (502)
Q Consensus 156 ~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~ 191 (502)
|+...+++.+--.......-++..+|..+++.+.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~ 188 (209)
T PF06912_consen 153 RYLRGKDRALRRALRYLLIILSFFIGAILGALLYRR 188 (209)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344443444455666666777777777777776
No 302
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=78.34 E-value=7.6 Score=28.92 Aligned_cols=36 Identities=19% Similarity=0.126 Sum_probs=29.5
Q ss_pred CCchhhHHHHHHHhhhhhhhhhHHHHHHHHHHhcCC
Q 010744 400 AKHRTMIYAFDRAFEGSFSSFAAPLVGILSEKMFGY 435 (502)
Q Consensus 400 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~ 435 (502)
++.++.+.++-...-.+++.+.....|++.|++.+-
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~agT 72 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGT 72 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 456778888888888888998888899999997653
No 303
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=77.20 E-value=5.5 Score=37.22 Aligned_cols=96 Identities=20% Similarity=0.191 Sum_probs=78.2
Q ss_pred chHHHHHHHHHHhhhcchhhhhhhhcCCch--hHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHHh
Q 010744 78 LGYLTFIRNFVQGLSSPLAGVLVINYDRPA--VLTIGILCWAFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFIA 155 (502)
Q Consensus 78 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~--~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 155 (502)
-|..-++..+..+++.+..|.+--++.|.. .+..+.+.-+...++++.++++|..+++-++.+.-.....+.+..-++
T Consensus 273 NG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA 352 (433)
T KOG3810|consen 273 NGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIA 352 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHH
Confidence 355667777888899999999998888764 556666666667778888999999999888888888888888888999
Q ss_pred hccCCCCcchhhhHHHHH
Q 010744 156 DSYKDGVRGAGFGLLSLV 173 (502)
Q Consensus 156 ~~~~~~~r~~~~~~~~~~ 173 (502)
+....+.-|..+|+....
T Consensus 353 ~nL~~e~~gLvFGiNTFv 370 (433)
T KOG3810|consen 353 RNLSSELFGLVFGINTFV 370 (433)
T ss_pred HhhhhhhheeeeehHHHH
Confidence 988888889998887654
No 304
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=75.71 E-value=51 Score=28.34 Aligned_cols=36 Identities=22% Similarity=0.314 Sum_probs=27.5
Q ss_pred CCChhhHHHHHHHHHhhhcccccchhhhhhhhcccc
Q 010744 299 GFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAY 334 (502)
Q Consensus 299 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~ 334 (502)
.-|+.+..+.+..++++.++..+..+.+..+.++|.
T Consensus 146 s~s~~~G~l~m~~FgLGT~p~ll~~~~~~~~l~~~~ 181 (199)
T PF13386_consen 146 SGSPLYGALLMLAFGLGTLPALLLAGLLAGKLSRRL 181 (199)
T ss_pred cCChHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 446777788888899999888888887777776543
No 305
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=74.28 E-value=36 Score=34.53 Aligned_cols=28 Identities=7% Similarity=0.161 Sum_probs=18.4
Q ss_pred HHHHHHhhhcccccchhhhhhhhccccC
Q 010744 308 LLSLFAIGCAVGSFLGGVVADRISQAYP 335 (502)
Q Consensus 308 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~ 335 (502)
....+.+.+.++...++++.+.++.++.
T Consensus 302 ~i~~y~~~~~iaGy~S~~~yk~~~g~~W 329 (521)
T PF02990_consen 302 AIILYALTSFIAGYVSARLYKSFGGKKW 329 (521)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHcCCCce
Confidence 3445566667777777777777776553
No 306
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=69.52 E-value=16 Score=35.08 Aligned_cols=25 Identities=12% Similarity=0.339 Sum_probs=14.7
Q ss_pred HHHhhhcccccchhhhhhhhccccC
Q 010744 311 LFAIGCAVGSFLGGVVADRISQAYP 335 (502)
Q Consensus 311 ~~~~~~~~~~~~~g~l~d~~g~~~~ 335 (502)
+..+..-+....+|-+-.|.|-|+.
T Consensus 335 vYAlTs~i~GY~~gs~Y~r~gG~~W 359 (593)
T KOG1277|consen 335 VYALTSPINGYVSGSFYARLGGRRW 359 (593)
T ss_pred HHHhcccccccccceeeehhccHHH
Confidence 3455555556666666667665553
No 307
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=63.79 E-value=45 Score=34.22 Aligned_cols=144 Identities=12% Similarity=0.117 Sum_probs=75.1
Q ss_pred HHHHHHHH-HhCCChhhHHHHHHHHHhhhcccccchhhhhhhh-ccccCCcchhHHhhhhhhhhhhHHHHHhhhccC---
Q 010744 289 VFFTMWFE-LIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRI-SQAYPHSGRVMCAQFSAFMGIPFSWFLLTAIPQ--- 363 (502)
Q Consensus 289 ~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 363 (502)
.-+-.|+. +++.+...+.-.............+.+++++|-+ ||-+.+.........++. ++..........+.
T Consensus 58 ~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~-~lt~~a~~~~l~p~~~~ 136 (571)
T KOG1237|consen 58 SNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLF-GLTLSAMIPALLPFMCK 136 (571)
T ss_pred hHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH-HHHHHHHhhhcCCcccc
Confidence 33444554 4777776666666666666777778999999976 444322111111111100 00001111111110
Q ss_pred ---C----c--c--hhHHHHHHHHHHHHHHhhhccCCCccchhcccCCC----ch--hhHHHHHHHhhhhhhhhhHHHHH
Q 010744 364 ---S----V--S--NYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAK----HR--TMIYAFDRAFEGSFSSFAAPLVG 426 (502)
Q Consensus 364 ---~----~--~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~----~~--~~~~g~~~~~~~~~~~~~~~~~g 426 (502)
. . . ....+...+.+..+|.+..-+ ...+.-.|-++.. .+ ..-..+.....+.|..++..+.-
T Consensus 137 ~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~-~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~v 215 (571)
T KOG1237|consen 137 FKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRP-CLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLV 215 (571)
T ss_pred CCCCCCcccCcchHHHHHHHHHHHHheeccCCCCC-cchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHH
Confidence 0 0 1 123445555556667777666 6777777777622 22 24555666666777777777777
Q ss_pred HHHHHhcCC
Q 010744 427 ILSEKMFGY 435 (502)
Q Consensus 427 ~l~~~~~~~ 435 (502)
++.++ .+|
T Consensus 216 yiq~~-~~w 223 (571)
T KOG1237|consen 216 YIQDN-VGW 223 (571)
T ss_pred hhhhc-ccc
Confidence 76665 444
No 308
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=63.13 E-value=92 Score=29.86 Aligned_cols=27 Identities=19% Similarity=0.230 Sum_probs=19.9
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 406 IYAFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 406 ~~g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
.++.....-.....+.|.+.|.+....
T Consensus 176 mnatir~iDq~tn~Lapv~tg~Iitfv 202 (503)
T KOG2601|consen 176 MNATIRGIDQSTNLLAPVITGLIITFV 202 (503)
T ss_pred cchhhhhhhhhhhchhhhhhcccceee
Confidence 336666666667779999999988774
No 309
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=62.25 E-value=1.1e+02 Score=27.60 Aligned_cols=100 Identities=18% Similarity=0.120 Sum_probs=52.4
Q ss_pred hHHHHHHHHHHhhhcchhhhhhh-hcCCchhHH----HHHHHHHHHHHHHHh-h----hHHHHHHHHHHHHhhhhhhhhh
Q 010744 79 GYLTFIRNFVQGLSSPLAGVLVI-NYDRPAVLT----IGILCWAFSTAAVGA-S----QHFLHVGMWRAVNGFGLAIVIP 148 (502)
Q Consensus 79 g~~~s~~~~~~~~~~~~~G~l~d-r~Grr~~l~----~~~~~~~~~~~~~~~-~----~~~~~l~~~r~l~G~~~~~~~~ 148 (502)
....-++..+..+|....|++.. ++-||+.+. .+++++.++.+.... . .+...+++.-++.|++.=+..+
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 34445666777788888888877 466666443 334455554444212 1 2456677777888876433333
Q ss_pred hhHHHHhhccCCCCcchhhhHHHHHHhhhhh
Q 010744 149 ALQSFIADSYKDGVRGAGFGLLSLVGTMGGI 179 (502)
Q Consensus 149 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ 179 (502)
.. -.+..-++..++-+.--.++..+++|.+
T Consensus 224 Vi-L~lPhEyK~~~pk~ig~~Fg~iWGfGY~ 253 (267)
T PF07672_consen 224 VI-LNLPHEYKGYNPKKIGIQFGLIWGFGYI 253 (267)
T ss_pred HH-hcChhhhcCCCcceehhHHHHHHHHHHH
Confidence 32 2233333333333333344444444443
No 310
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=61.19 E-value=1.4e+02 Score=27.61 Aligned_cols=83 Identities=17% Similarity=0.114 Sum_probs=48.1
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhh---cCCchhHHHHH
Q 010744 37 LGISLSLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVIN---YDRPAVLTIGI 113 (502)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr---~Grr~~l~~~~ 113 (502)
+++....+.+..++++.-+..+..+--+..+++..+.-....+++.+..... +..+-.++ ||.||.=+++.
T Consensus 21 ~r~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~lal~A~~------~a~r~~~~~~TfGy~R~eiLaa 94 (296)
T COG1230 21 ERRLLIALLLNLAFMLIEIIGGLLTGSLALLADALHMLSDALALLLALIAIK------LARRPATKRFTFGYKRLEILAA 94 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHHHHHHHHHHHH------HhcCCCCCCCCccHhHHHHHHH
Confidence 3444444555555555544445555566777888886666666665554433 33344443 88888777777
Q ss_pred HHHHHHHHHHHh
Q 010744 114 LCWAFSTAAVGA 125 (502)
Q Consensus 114 ~~~~~~~~~~~~ 125 (502)
++.++..+..++
T Consensus 95 ~~nav~Li~~s~ 106 (296)
T COG1230 95 FLNALLLIVVSL 106 (296)
T ss_pred HHHHHHHHHHHH
Confidence 666665555443
No 311
>COG3619 Predicted membrane protein [Function unknown]
Probab=58.99 E-value=1.3e+02 Score=26.54 Aligned_cols=152 Identities=16% Similarity=0.102 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhchhh--------HHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCC-ch--h
Q 010744 40 SLSLILINLAAIMERADENLLPSV--------YKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDR-PA--V 108 (502)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~--~ 108 (502)
+..+.++..+.+.+.+.....+-. ...+.-++.-++...........+..+++......+..|..| .. .
T Consensus 11 ~l~~lLa~~aGfvDa~~f~~~gg~F~s~~TGN~v~~gi~l~~~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~~~~~~l 90 (226)
T COG3619 11 RLGLLLALVAGFVDAFGFLHLGGVFVSFMTGNLVLLGIELAEGDAALAVLLLLPILAFVLGVAAAELISRRATRSFIPVL 90 (226)
T ss_pred HHHHHHHHHhhhHHHHHHHHhcCchhhheeccHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHH
Confidence 344555566666666655222211 122222333234445555566667777775554444444443 12 2
Q ss_pred HHHHHHHHHHHHHHHHh----hhHHHHHHHHHHHHhh-----------hhhhhhh-----hhHHHHhhccCCCCcc-hhh
Q 010744 109 LTIGILCWAFSTAAVGA----SQHFLHVGMWRAVNGF-----------GLAIVIP-----ALQSFIADSYKDGVRG-AGF 167 (502)
Q Consensus 109 l~~~~~~~~~~~~~~~~----~~~~~~l~~~r~l~G~-----------~~~~~~~-----~~~~~i~~~~~~~~r~-~~~ 167 (502)
...+.++.....+..++ +++....+..-+..|+ ..+..+. ....-+.++...|+.. .--
T Consensus 91 ~~~~~ll~~~v~~~~~~~p~~~~~~~~~il~~f~mg~Qnasf~k~~g~~~~~t~~TGnl~~~~~~l~~~l~~k~~~~~~~ 170 (226)
T COG3619 91 LLVSLLLALIALLALGFIPESSPDFVAVILVAFAMGIQNASFRKVGGAPYGTTYVTGNLKSAGRGLGRYLSGKDKEKLRD 170 (226)
T ss_pred HHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHhcCccccchhhhhhHHHHHHHHHHHHhccchHHHHH
Confidence 23333333333334443 2455554444455552 2221111 1122344555443222 223
Q ss_pred hHHHHHHhhhhhHHHHHHHHHhhh
Q 010744 168 GLLSLVGTMGGIGGGVLATIMAGH 191 (502)
Q Consensus 168 ~~~~~~~~~G~~~g~~~~~~l~~~ 191 (502)
...+...-++.++|..+++.+...
T Consensus 171 ~~~~~~~il~f~~GAi~g~ll~~~ 194 (226)
T COG3619 171 WLIYLSLILSFIVGAICGALLTLF 194 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444555666666666666543
No 312
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=58.58 E-value=18 Score=29.32 Aligned_cols=48 Identities=10% Similarity=0.101 Sum_probs=32.2
Q ss_pred hhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhh
Q 010744 367 NYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFS 418 (502)
Q Consensus 367 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~ 418 (502)
.+..++..+.++|.+.-+ +.|.+++..-+++..|+..|+-.+-.|.+.
T Consensus 96 ~~~~~~~S~~~Fg~gllG----isYGilSaSWD~~r~GSllG~~e~~~N~~r 143 (153)
T PF11947_consen 96 PWAVLLVSLVFFGLGLLG----ISYGILSASWDPEREGSLLGWEEFKRNWGR 143 (153)
T ss_pred chHHHHHHHHHHHHHHHh----hhhhhcccccCCCCCCCcccHHHHHHhHHH
Confidence 345555666666655433 346666667788889999999888777543
No 313
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=58.12 E-value=1.8e+02 Score=28.02 Aligned_cols=22 Identities=27% Similarity=0.397 Sum_probs=12.4
Q ss_pred HHhhhcchhHHHHHHHHHHhhh
Q 010744 261 ATKAVIKVPTFQIIVLQGIVGS 282 (502)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~ 282 (502)
..++.+++|..+..++......
T Consensus 237 ~~~~~~~nP~~~a~~lgli~~~ 258 (385)
T PF03547_consen 237 SILKLFKNPPLIAIILGLIIGL 258 (385)
T ss_pred HHHHHHhCcHHHHHHHHHHHHH
Confidence 3345666677666665554443
No 314
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=58.08 E-value=76 Score=28.53 Aligned_cols=13 Identities=8% Similarity=0.138 Sum_probs=6.2
Q ss_pred hhHHHHH-HHHHHh
Q 010744 286 TAMVFFT-MWFELI 298 (502)
Q Consensus 286 ~~~~~~~-~~~~~~ 298 (502)
...++.| .|.++.
T Consensus 195 yGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 195 YGSNFVPVIYIQDH 208 (254)
T ss_pred HhcccchHHHHHhC
Confidence 3345555 355553
No 315
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=57.62 E-value=44 Score=27.21 Aligned_cols=51 Identities=12% Similarity=0.156 Sum_probs=36.8
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhH
Q 010744 127 QHFLHVGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIG 180 (502)
Q Consensus 127 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 180 (502)
+++..+++.-++.|+| .....+.+++--.++++.|..+|+-..--+++-+.
T Consensus 95 P~~~~~~~S~~~Fg~g---llGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLG---LLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred CchHHHHHHHHHHHHH---HHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 5566666666666655 33456677887788999999999998888876654
No 316
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=52.93 E-value=21 Score=26.78 Aligned_cols=52 Identities=21% Similarity=0.029 Sum_probs=43.7
Q ss_pred CCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhh
Q 010744 75 PSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGAS 126 (502)
Q Consensus 75 ~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 126 (502)
++..|-+.++|.-.+.+.++.+++..|+.-+.+.=.++..++.++..+..+.
T Consensus 53 p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 53 PAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred cccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 3678889999999999999999999999998888888888877777665443
No 317
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=50.80 E-value=47 Score=24.94 Aligned_cols=27 Identities=11% Similarity=-0.067 Sum_probs=17.7
Q ss_pred HHHHHHHHhhhcchhhhhhhhc-CCchh
Q 010744 82 TFIRNFVQGLSSPLAGVLVINY-DRPAV 108 (502)
Q Consensus 82 ~s~~~~~~~~~~~~~G~l~dr~-Grr~~ 108 (502)
.+.-+++..+.....||+.||| |.++.
T Consensus 48 lssefIsGilVGa~iG~llD~~agTsPw 75 (116)
T COG5336 48 LSSEFISGILVGAGIGWLLDKFAGTSPW 75 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcH
Confidence 3445566666667789999986 44443
No 318
>PRK02237 hypothetical protein; Provisional
Probab=45.52 E-value=37 Score=25.57 Aligned_cols=51 Identities=16% Similarity=-0.108 Sum_probs=42.3
Q ss_pred CCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhh
Q 010744 76 SDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGAS 126 (502)
Q Consensus 76 ~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 126 (502)
+..|-+.++|.-.+.+.++.+++..|+.-+-+.=.+|..++.+|..+..+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 458889999999999999999999999988887778877777777655443
No 319
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=45.33 E-value=87 Score=20.58 Aligned_cols=28 Identities=14% Similarity=0.277 Sum_probs=18.9
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHhccCC
Q 010744 197 PGWRCAFILMATLSVLIAFLVLVFVVDP 224 (502)
Q Consensus 197 ~~wr~~f~~~~~~~~~~~~~~~~~~~~~ 224 (502)
++++....+..+.+++...+....++++
T Consensus 29 ~n~~~~~Ii~vi~~i~~~~~~~~i~~~~ 56 (57)
T PF11151_consen 29 YNFTTAAIIAVIFGIIVANIIAVIPKKS 56 (57)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 6777777777777776666666555543
No 320
>COG4721 ABC-type cobalt transport system, predicted permease component [Inorganic ion transport and metabolism]
Probab=45.03 E-value=1.8e+02 Score=24.02 Aligned_cols=86 Identities=15% Similarity=0.091 Sum_probs=48.9
Q ss_pred HhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCch-hHHHHHHHHHHHHHHHHhhhHHHHHH
Q 010744 55 ADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPA-VLTIGILCWAFSTAAVGASQHFLHVG 133 (502)
Q Consensus 55 ~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~-~l~~~~~~~~~~~~~~~~~~~~~~l~ 133 (502)
...+.++.++...-.-+++++..-+.+..+..++..++.++. ||+ .-+++=++.++...+.+- +.-..-+
T Consensus 25 l~w~~~~~v~at~lhp~ale~~~~~i~~GiW~maavi~~l~I--------pkpGaAl~~Ev~Aa~ve~ll~s-qfgi~ti 95 (192)
T COG4721 25 LGWGYVGNVLATLLHPLALEPFANEILFGIWFMAAVIAALFI--------PKPGAALIGEVLAALVEVLLGS-QFGIGTI 95 (192)
T ss_pred eehhhhhHHHHHhcchhhcCccccchHHHHHHHHHHHeeeee--------cCCcHHHHHHHHHHHHHHHHcC-CCCchHH
Confidence 333344444444444444777777888888888877766653 444 344555555444444332 2222335
Q ss_pred HHHHHHhhhhhhhhhh
Q 010744 134 MWRAVNGFGLAIVIPA 149 (502)
Q Consensus 134 ~~r~l~G~~~~~~~~~ 149 (502)
+.-++||+|.-..+..
T Consensus 96 vsgfvQGlgaE~vFa~ 111 (192)
T COG4721 96 VSGFVQGLGAEFVFAV 111 (192)
T ss_pred HHHHHHhhhhhHHHHH
Confidence 5668999987665544
No 321
>COG2836 Uncharacterized conserved protein [Function unknown]
Probab=44.61 E-value=2.2e+02 Score=24.99 Aligned_cols=33 Identities=15% Similarity=0.207 Sum_probs=27.2
Q ss_pred CCChhhHHHHHHHHHhhhcccccchhhhhhhhc
Q 010744 299 GFDHSSTAALLSLFAIGCAVGSFLGGVVADRIS 331 (502)
Q Consensus 299 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g 331 (502)
.-|+.+-++.+..++++.....+..|..++++.
T Consensus 160 tgS~~~Gal~mlaFGlGTlP~ll~~G~~s~~~s 192 (232)
T COG2836 160 TGSAFEGALVMLAFGLGTLPNLLAMGIFSSKLS 192 (232)
T ss_pred cCCHHHHHHHHHHHhhcccHHHHHHHHHHHHHH
Confidence 346778888888999999998888888888774
No 322
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=43.23 E-value=12 Score=36.90 Aligned_cols=33 Identities=12% Similarity=0.197 Sum_probs=16.3
Q ss_pred CChhhHHHHHHHH----Hhhhcccccchhhhhhhhcc
Q 010744 300 FDHSSTAALLSLF----AIGCAVGSFLGGVVADRISQ 332 (502)
Q Consensus 300 ~s~~~~~~~~~~~----~~~~~~~~~~~g~l~d~~g~ 332 (502)
+||..-|.+++.. .+.++++...++++.+-++.
T Consensus 356 lSPs~RGsLmT~~~~l~v~~G~~agY~s~rlyk~~~g 392 (628)
T KOG1278|consen 356 LSPSSRGSLMTAMVLLFVFMGFVAGYVSARLYKTFKG 392 (628)
T ss_pred CCccccccHHHHHHHHHHHHHHhhhhhhhhhHhhhcC
Confidence 3555555444443 44445555555555554433
No 323
>COG4769 Predicted membrane protein [Function unknown]
Probab=42.06 E-value=47 Score=27.15 Aligned_cols=56 Identities=9% Similarity=0.026 Sum_probs=39.7
Q ss_pred HHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhh
Q 010744 85 RNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNGFGLAIV 146 (502)
Q Consensus 85 ~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 146 (502)
+.+..++.+...-++..++|+|++-.++.-. .-++.+|..++.+.+++.|-.....
T Consensus 82 ~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~------mGaF~hNl~QLivas~Lv~~~~v~l 137 (181)
T COG4769 82 YSFAGAILSTLFMYFLYQFGPKYLSLLGISV------MGAFTHNLGQLIVASFLVFTTSVML 137 (181)
T ss_pred HHHHHHHHHHHHHHHHHHcCCceEeeeehhh------HHHHHHhHHHHHHHHHHHhcchHHH
Confidence 4445555666667888999999875555433 3567899999999999987654433
No 324
>PRK10263 DNA translocase FtsK; Provisional
Probab=41.07 E-value=2.7e+02 Score=31.63 Aligned_cols=16 Identities=31% Similarity=0.528 Sum_probs=8.3
Q ss_pred hhhhHHHHHHHHHhhh
Q 010744 176 MGGIGGGVLATIMAGH 191 (502)
Q Consensus 176 ~G~~~g~~~~~~l~~~ 191 (502)
.|+++|..++..+...
T Consensus 142 gGGIIG~lLs~lL~~L 157 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPL 157 (1355)
T ss_pred ccchHHHHHHHHHHHH
Confidence 3555555555555443
No 325
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=39.54 E-value=3.1e+02 Score=25.28 Aligned_cols=58 Identities=12% Similarity=0.113 Sum_probs=38.1
Q ss_pred HHHHHHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhh
Q 010744 132 VGMWRAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAG 190 (502)
Q Consensus 132 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 190 (502)
--..|.+.|+-. ..+..++++++-.||++++--..--...+.+++.++-+++|-.+.-
T Consensus 22 ~~~lr~~~g~~~-vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~~ 79 (287)
T PF07760_consen 22 IPPLRVILGFPF-VLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLNY 79 (287)
T ss_pred hhHHHHHHHHHH-HHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456788888864 4456778999999986665444444455555556666666655543
No 326
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=38.91 E-value=23 Score=30.86 Aligned_cols=52 Identities=12% Similarity=0.229 Sum_probs=38.1
Q ss_pred HHHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHH
Q 010744 136 RAVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIM 188 (502)
Q Consensus 136 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 188 (502)
-.-.|+|.+..+.++..-+.+.+ |+......+...+.+-+..+.|-.+.-++
T Consensus 178 AMasGvGSgSMMaAa~~aL~~~~-P~~a~~i~A~AaaSNllt~~~G~Y~~ifi 229 (241)
T PF11299_consen 178 AMASGVGSGSMMAAASGALAAAY-PEMADQILAFAAASNLLTSVTGLYMSIFI 229 (241)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHC-cchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35589999999999999999999 46666677777766666666665555444
No 327
>COG2119 Predicted membrane protein [Function unknown]
Probab=38.87 E-value=2.3e+02 Score=23.92 Aligned_cols=78 Identities=8% Similarity=0.046 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHH-HHhhhhchhhHHHHHhhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHH
Q 010744 42 SLILINLAAIME-RADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFST 120 (502)
Q Consensus 42 ~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 120 (502)
.+...++..|+. .-|.+-+.. -.+..+++......---.....+...++...+.++++|+..|++-.++.+++.+..
T Consensus 101 ~f~~tfi~~FlaE~GDKTQiAT--IaLaA~~~~~~~V~~Gt~lg~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fa 178 (190)
T COG2119 101 VFVTTFITFFLAELGDKTQIAT--IALAADYHSPWAVFAGTTLGMILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFA 178 (190)
T ss_pred HHHHHHHHHHHHHhccHHHHHH--HHHhhcCCCceeeehhhHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence 444444444443 445544332 24556666432222112223345666777788889999999998888777765554
Q ss_pred H
Q 010744 121 A 121 (502)
Q Consensus 121 ~ 121 (502)
+
T Consensus 179 l 179 (190)
T COG2119 179 L 179 (190)
T ss_pred H
Confidence 3
No 328
>PHA02902 putative IMV membrane protein; Provisional
Probab=37.46 E-value=46 Score=22.09 Aligned_cols=9 Identities=22% Similarity=0.453 Sum_probs=3.6
Q ss_pred HHhhhhhhh
Q 010744 471 FYTPLYKIF 479 (502)
Q Consensus 471 ~~~~~~~~~ 479 (502)
++...+++.
T Consensus 19 liya~YrR~ 27 (70)
T PHA02902 19 LIYAAYKRY 27 (70)
T ss_pred HHHHHHHHh
Confidence 333344443
No 329
>PF10027 DUF2269: Predicted integral membrane protein (DUF2269); InterPro: IPR018729 Members of this family of bacterial hypothetical integral membrane proteins have no known function.
Probab=35.79 E-value=1.8e+02 Score=23.53 Aligned_cols=20 Identities=15% Similarity=0.413 Sum_probs=11.9
Q ss_pred hhhhhhHHHHHHHHHHhcCC
Q 010744 416 SFSSFAAPLVGILSEKMFGY 435 (502)
Q Consensus 416 ~~~~~~~~~~g~l~~~~~~~ 435 (502)
.-+.+.-++.|.+.-...++
T Consensus 53 ~~~~~~~~vtG~~l~~~~g~ 72 (150)
T PF10027_consen 53 APGGILLPVTGLWLAWLLGW 72 (150)
T ss_pred HHHHHHHHHHHHHHHHHhCC
Confidence 34455556677777665555
No 330
>PTZ00370 STEVOR; Provisional
Probab=34.32 E-value=96 Score=28.13 Aligned_cols=20 Identities=20% Similarity=0.220 Sum_probs=11.2
Q ss_pred HHHHHHHHhhhhhhhhhhhH
Q 010744 465 FGLCCLFYTPLYKIFKRDRE 484 (502)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~ 484 (502)
.++.++++++++|++++..+
T Consensus 268 ~vvliilYiwlyrrRK~swk 287 (296)
T PTZ00370 268 AVVLIILYIWLYRRRKNSWK 287 (296)
T ss_pred HHHHHHHHHHHHHhhcchhH
Confidence 33445566666666555444
No 331
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=34.23 E-value=1.1e+02 Score=21.56 Aligned_cols=15 Identities=20% Similarity=0.459 Sum_probs=9.6
Q ss_pred hhhhHHHHHHHHHHh
Q 010744 418 SSFAAPLVGILSEKM 432 (502)
Q Consensus 418 ~~~~~~~~g~l~~~~ 432 (502)
+++-.++.|++.+..
T Consensus 20 ~~iisfi~Gy~~q~~ 34 (76)
T PF06645_consen 20 SAIISFIVGYITQSF 34 (76)
T ss_pred HHHHHHHHHHHHHHH
Confidence 344556678887775
No 332
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=34.07 E-value=4.3e+02 Score=25.31 Aligned_cols=60 Identities=7% Similarity=-0.104 Sum_probs=34.0
Q ss_pred hhHHHHHHHHHHHHHHhhhccCCCccchhcccCCCchhhHHHHHHHhhhhhhhhhHHHHHHHH
Q 010744 367 NYYTYAVTLVLMGLTISWNATAANGPMFAEVVPAKHRTMIYAFDRAFEGSFSSFAAPLVGILS 429 (502)
Q Consensus 367 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~ 429 (502)
..+++.......|.-.|.-.| +.+.+.+... .......+.....-++|+..+.++..++.
T Consensus 104 ~~~Vly~lt~vIG~LVG~EiP-L~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~ll 163 (508)
T COG4262 104 SRLVLYALTAVIGVLVGAEIP-LLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFLL 163 (508)
T ss_pred HHHHHHHHHHHHHHHHhcchH-HHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHHH
Confidence 345566777778887887777 6666666521 12222233333445666666665555544
No 333
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=33.43 E-value=1.5e+02 Score=24.04 Aligned_cols=26 Identities=15% Similarity=0.002 Sum_probs=21.9
Q ss_pred HHHHHHHhhhcchhhhhhhhcCCchh
Q 010744 83 FIRNFVQGLSSPLAGVLVINYDRPAV 108 (502)
Q Consensus 83 s~~~~~~~~~~~~~G~l~dr~Grr~~ 108 (502)
.-|.+++.+...+.|++.+|..+++.
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~~ 85 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSRS 85 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccch
Confidence 56778889999999999999988743
No 334
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=32.66 E-value=1.5e+02 Score=20.79 Aligned_cols=38 Identities=16% Similarity=0.184 Sum_probs=20.7
Q ss_pred hhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHH
Q 010744 167 FGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVL 212 (502)
Q Consensus 167 ~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~ 212 (502)
--+.+....++.+++-++|...- +.+.++++.++-.++
T Consensus 10 e~l~~~il~~~~iisfi~Gy~~q--------~~~~~~~~~~~g~~~ 47 (76)
T PF06645_consen 10 EKLMQYILIISAIISFIVGYITQ--------SFSYTFYIYGAGVVL 47 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHH
Confidence 34455556666666655555442 456666665544333
No 335
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=31.19 E-value=3.1e+02 Score=23.54 Aligned_cols=31 Identities=23% Similarity=0.097 Sum_probs=24.2
Q ss_pred CCCcchhhhHHHHHHhhhhhHHHHHHHHHhh
Q 010744 160 DGVRGAGFGLLSLVGTMGGIGGGVLATIMAG 190 (502)
Q Consensus 160 ~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 190 (502)
.++.+++.++-..+..+|.++|..+..++..
T Consensus 136 ~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 136 ERKLGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4566888888888888888888888877754
No 336
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=30.90 E-value=4e+02 Score=24.43 Aligned_cols=38 Identities=21% Similarity=0.264 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHhhhhhhh
Q 010744 109 LTIGILCWAFSTAAVGAS-QHFLHVGMWRAVNGFGLAIV 146 (502)
Q Consensus 109 l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~ 146 (502)
++.+++.+++++++..+. ++.|.+.+.-++.+++.+..
T Consensus 2 L~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ml 40 (284)
T PF12805_consen 2 LIATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGML 40 (284)
T ss_pred HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 345555565555555554 44455555555555554433
No 337
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=29.66 E-value=1.4e+02 Score=21.64 Aligned_cols=41 Identities=10% Similarity=0.000 Sum_probs=29.1
Q ss_pred HhhhcchhhhhhhhcCC-------chhHHHHHHHHHHHHHHHHhhhHH
Q 010744 89 QGLSSPLAGVLVINYDR-------PAVLTIGILCWAFSTAAVGASQHF 129 (502)
Q Consensus 89 ~~~~~~~~G~l~dr~Gr-------r~~l~~~~~~~~~~~~~~~~~~~~ 129 (502)
...+.+.++++.+|.-+ ++.+.++.++...+.++++..+|.
T Consensus 31 ~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 31 ATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 34445566666666554 788888888888888888876654
No 338
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=29.17 E-value=1.1e+02 Score=27.81 Aligned_cols=18 Identities=22% Similarity=0.298 Sum_probs=9.3
Q ss_pred HHHHHHHHhhhhhhhhhh
Q 010744 465 FGLCCLFYTPLYKIFKRD 482 (502)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~ 482 (502)
.++.++++++++|++++.
T Consensus 272 ~vvliiLYiWlyrrRK~s 289 (295)
T TIGR01478 272 TVVLIILYIWLYRRRKKS 289 (295)
T ss_pred HHHHHHHHHHHHHhhccc
Confidence 334455556666555443
No 339
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=28.90 E-value=1.8e+02 Score=21.28 Aligned_cols=24 Identities=8% Similarity=0.115 Sum_probs=11.0
Q ss_pred HHHHHhhhhhhhhhHHHHHHHHHHh
Q 010744 408 AFDRAFEGSFSSFAAPLVGILSEKM 432 (502)
Q Consensus 408 g~~~~~~~~~~~~~~~~~g~l~~~~ 432 (502)
-....+-.+++.+| .+.|+..+..
T Consensus 26 r~~q~ilti~aiVg-~i~Gf~~Qql 49 (101)
T KOG4112|consen 26 RFQQLILTIGAIVG-FIYGFAQQQL 49 (101)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 34444444444333 3456655553
No 340
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=28.33 E-value=1.6e+02 Score=24.99 Aligned_cols=23 Identities=13% Similarity=-0.102 Sum_probs=20.3
Q ss_pred HHHHHHHhhhcchhhhhhhhcCC
Q 010744 83 FIRNFVQGLSSPLAGVLVINYDR 105 (502)
Q Consensus 83 s~~~~~~~~~~~~~G~l~dr~Gr 105 (502)
.-|.+++.++..+.|++.||.-+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 56788899999999999999886
No 341
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=27.84 E-value=6.1e+02 Score=25.15 Aligned_cols=49 Identities=22% Similarity=0.140 Sum_probs=33.9
Q ss_pred CCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHH
Q 010744 159 KDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLV 217 (502)
Q Consensus 159 ~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~ 217 (502)
.+++.+..++++.++.+.|.+.-|...+ .+|-|+..+..+++.......
T Consensus 18 ~~~d~~W~l~l~GTAIGAGmLfLPI~~g----------~~Gf~p~lillll~~p~m~~s 66 (443)
T PRK13629 18 RKSDTTWTLGLFGTAIGAGVLFFPIRAG----------FGGLIPILLMLVLAYPIAFYC 66 (443)
T ss_pred ccccchHHHHHHHHHHhHHHHHHHHHHh----------cchHHHHHHHHHHHHHHHHHH
Confidence 3567788888888888888888777664 456666666665555554444
No 342
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=27.78 E-value=3.1e+02 Score=25.20 Aligned_cols=14 Identities=14% Similarity=0.263 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHHhh
Q 010744 371 YAVTLVLMGLTISW 384 (502)
Q Consensus 371 ~~~~~~~~g~~~~~ 384 (502)
+.+.+.+.+|+.++
T Consensus 26 ~~~~~~~~~F~~~m 39 (284)
T PF12805_consen 26 LILVLALLTFFFGM 39 (284)
T ss_pred HHHHHHHHHHHHHH
Confidence 33444444444443
No 343
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=27.76 E-value=4.7e+02 Score=25.56 Aligned_cols=49 Identities=18% Similarity=0.165 Sum_probs=30.9
Q ss_pred HHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHH
Q 010744 137 AVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLA 185 (502)
Q Consensus 137 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~ 185 (502)
++.|+..+........++.+..+-++---+.++...+.-+|.++.++++
T Consensus 283 ~viG~iag~~~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa 331 (403)
T TIGR00836 283 IIIGLVAGVLCYLAVSKLKKKLKIDDPLDAFAVHGVGGIWGLIATGLFA 331 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCcccchhhhhhHHHHHHHHHHhc
Confidence 4455555555555555566666566666678888777777776666655
No 344
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=27.24 E-value=4.4e+02 Score=26.35 Aligned_cols=21 Identities=19% Similarity=0.447 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcc
Q 010744 202 AFILMATLSVLIAFLVLVFVV 222 (502)
Q Consensus 202 ~f~~~~~~~~~~~~~~~~~~~ 222 (502)
.|.+..++.++.+++.+..|.
T Consensus 4 ~~~il~iiiv~~~ilt~~iPa 24 (465)
T PF03606_consen 4 TFVILFIIIVFAAILTWIIPA 24 (465)
T ss_pred HHHHHHHHHHHHHHHHhcCcc
Confidence 344555555555555555543
No 345
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=26.97 E-value=6.1e+02 Score=24.83 Aligned_cols=48 Identities=10% Similarity=0.073 Sum_probs=28.4
Q ss_pred HHHhhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHH
Q 010744 137 AVNGFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLA 185 (502)
Q Consensus 137 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~ 185 (502)
++.|+-.+........++ +..+-++---+.++...+..+|.++.++..
T Consensus 297 ~iiG~iag~v~~~~~~~~-~~~~iDD~~~~~~vHg~~Gi~G~i~~glf~ 344 (404)
T TIGR03644 297 TLIGAVGGVIVVFSIVLL-DKLKIDDPVGAISVHGVAGIWGTLVVPITN 344 (404)
T ss_pred HHHHHHHHHHHHHHHHHH-HhCCCCCCcCchHhhhHHHHHHHHHHHHhc
Confidence 344444444444444444 455566666778888777777766666554
No 346
>PRK10263 DNA translocase FtsK; Provisional
Probab=26.87 E-value=3.6e+02 Score=30.82 Aligned_cols=19 Identities=16% Similarity=0.051 Sum_probs=12.4
Q ss_pred hhhhhhhHHHHHHHHHHhc
Q 010744 415 GSFSSFAAPLVGILSEKMF 433 (502)
Q Consensus 415 ~~~~~~~~~~~g~l~~~~~ 433 (502)
..||.+|..+...+...++
T Consensus 141 ~gGGIIG~lLs~lL~~LfG 159 (1355)
T PRK10263 141 ASGGVIGSLLSTTLQPLLH 159 (1355)
T ss_pred cccchHHHHHHHHHHHHHh
Confidence 3467777777776666653
No 347
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=25.43 E-value=6.5e+02 Score=24.68 Aligned_cols=96 Identities=11% Similarity=0.029 Sum_probs=52.5
Q ss_pred hhcCCCCCCchHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhh
Q 010744 69 EAFNAGPSDLGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCWAFSTAAVGASQHFLHVGMWRAVNGFGLAIVIP 148 (502)
Q Consensus 69 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 148 (502)
... +++++...+.+...+...++.++-+....+.-+-+...-....+...........++.....+-++.|+.......
T Consensus 31 ~~~-l~~~~~~~li~at~~~sgi~Tllq~~~~~~~~~lp~~~G~sfa~i~~~~~~~~~~~~~~~~g~~i~~gl~~~ll~~ 109 (415)
T TIGR00801 31 LAP-LSAEQTQYLVSISLLTSGIGTLLQLFRTGGQIGLPSYLGSSFAFVSPMIAIGSGLGIPAIMGALIATGLVYTLLSL 109 (415)
T ss_pred ccc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhcCceeeeeeecCcHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHH
Confidence 445 8889999999999999999999888776654111222222212211111122222344444444555554333322
Q ss_pred h----hHHHHhhccCCCCcch
Q 010744 149 A----LQSFIADSYKDGVRGA 165 (502)
Q Consensus 149 ~----~~~~i~~~~~~~~r~~ 165 (502)
. ....+.+.+||.-.+.
T Consensus 110 ~~~~~~~~~i~~~~Pp~v~g~ 130 (415)
T TIGR00801 110 LIKKLGPRWLMKLFPPVVTGP 130 (415)
T ss_pred HHHHhhHHHHHhcCCchhHHH
Confidence 1 2345577888776654
No 348
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=25.07 E-value=91 Score=28.13 Aligned_cols=48 Identities=23% Similarity=0.389 Sum_probs=37.6
Q ss_pred HHHHHHHHHhCCChhhHHHHHHHHHhhhcccccchh---------hhhhhhccccCC
Q 010744 289 VFFTMWFELIGFDHSSTAALLSLFAIGCAVGSFLGG---------VVADRISQAYPH 336 (502)
Q Consensus 289 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g---------~l~d~~g~~~~~ 336 (502)
+|+-.|+++.|.++.....++....+...+..++.| +-.||+|||+..
T Consensus 38 TYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830|consen 38 TYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred HHHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeee
Confidence 667778888999999988888887787777777665 346889998864
No 349
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=24.42 E-value=1.4e+02 Score=28.85 Aligned_cols=10 Identities=30% Similarity=0.418 Sum_probs=4.8
Q ss_pred cchhhhhhhh
Q 010744 321 FLGGVVADRI 330 (502)
Q Consensus 321 ~~~g~l~d~~ 330 (502)
+..|++..|.
T Consensus 13 i~~G~~~~~~ 22 (385)
T PF03547_consen 13 ILLGYLLGRF 22 (385)
T ss_pred HHHHHHHHHh
Confidence 3445555544
No 350
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=24.07 E-value=2.6e+02 Score=26.41 Aligned_cols=108 Identities=12% Similarity=0.131 Sum_probs=48.6
Q ss_pred hHHHHHHHHHHhhhhhhhhHHHHHHHHH-HhCCChhhHHHHHHHHHhhhcccccchhhhhhhhccccCCcchhHHhhhhh
Q 010744 269 PTFQIIVLQGIVGSLPWTAMVFFTMWFE-LIGFDHSSTAALLSLFAIGCAVGSFLGGVVADRISQAYPHSGRVMCAQFSA 347 (502)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 347 (502)
+.++.+...+++.+..+.....+-.... ++|. ...+.+ .+.-+...++.+.+.+++|-|..
T Consensus 29 knv~i~s~~fl~~f~a~~gl~nlq~~vn~~lg~--~sl~~~----y~~l~~s~m~~~~~Ir~~g~K~t------------ 90 (390)
T KOG3097|consen 29 KNVLILSIAFLLTFTAYLGLQNLQTSVNYDLGT--VSLGAL----YLSLIDSSMFMPLLIRFLGTKWT------------ 90 (390)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhcCccc--chhhhh----hHHHHHHHHHHHHHHHHHhhHHH------------
Confidence 4455555555555555544433322222 2322 222222 23333444555588999999873
Q ss_pred hhhhhHHHHHhhhccCCcchhHHHHHHHHHHHHHHhhhccCCCccchhc
Q 010744 348 FMGIPFSWFLLTAIPQSVSNYYTYAVTLVLMGLTISWNATAANGPMFAE 396 (502)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 396 (502)
+.........+...... +.+..++......|++.+.... ..-+++.+
T Consensus 91 m~lav~~Y~lyiA~Nl~-pr~~tlVPa~~~~G~aa~p~W~-SkgtYlT~ 137 (390)
T KOG3097|consen 91 MVLAVFPYALYIAANLE-PRYETLVPAGLVLGMAAGPIWA-SKGTYLTP 137 (390)
T ss_pred HHHHHHHHHHHHHhhcc-hhHHhhccHHHhhccccccccc-cCcceecH
Confidence 22222222222222222 2233344555666766655544 33444443
No 351
>COG0861 TerC Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism]
Probab=23.99 E-value=5.4e+02 Score=23.23 Aligned_cols=61 Identities=8% Similarity=-0.137 Sum_probs=40.0
Q ss_pred hhhhhhhhhhhHHHHhhccCCCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHH
Q 010744 140 GFGLAIVIPALQSFIADSYKDGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMA 207 (502)
Q Consensus 140 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~ 207 (502)
=..-|.-.....+++.+.+|+++|.++.-+--.+.-+=-.+--..+.++.+ -|.+.+.+.+
T Consensus 27 E~vL~iDN~iviai~~~~Lp~~qr~ral~~Gl~~A~v~R~~ll~~~s~Ll~-------l~~~l~~~fg 87 (254)
T COG0861 27 EIVLGIDNAIVIAILASKLPPKQRKKALFIGLAGALVLRIILLASISWLLT-------LTQPLLYIFG 87 (254)
T ss_pred HHHHHhhHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hhHHHHHHHH
Confidence 334577778888999999999888877655444444444555555666665 3666676644
No 352
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=23.96 E-value=5.3e+02 Score=23.09 Aligned_cols=22 Identities=27% Similarity=0.294 Sum_probs=10.5
Q ss_pred hhhhHHHHHHhhhhhHHHHHHH
Q 010744 165 AGFGLLSLVGTMGGIGGGVLAT 186 (502)
Q Consensus 165 ~~~~~~~~~~~~G~~~g~~~~~ 186 (502)
+.....-.+.-+|.++|...+.
T Consensus 10 ~~~~~illg~~iGg~~G~~~~~ 31 (248)
T PF11368_consen 10 RFLLLILLGGLIGGFIGFFIGR 31 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444445555555544443
No 353
>PLN02776 prenyltransferase
Probab=23.83 E-value=6.2e+02 Score=24.06 Aligned_cols=25 Identities=12% Similarity=0.142 Sum_probs=13.5
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhhH
Q 010744 104 DRPAVLTIGILCWAFSTAAVGASQH 128 (502)
Q Consensus 104 Grr~~l~~~~~~~~~~~~~~~~~~~ 128 (502)
.+|..+.++.++..++..+.++..|
T Consensus 74 s~~~A~~~~~~l~~~g~~~l~~~~n 98 (341)
T PLN02776 74 SVPHAVAWAVVVGAAGVALLAYKTN 98 (341)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444566666666666644444333
No 354
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=23.82 E-value=6.4e+02 Score=24.00 Aligned_cols=126 Identities=13% Similarity=0.033 Sum_probs=66.8
Q ss_pred chHHHHHHHHHHhhhcchhhhhhhhcCCchhHHHHHHHH---HHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhhhhHHHH
Q 010744 78 LGYLTFIRNFVQGLSSPLAGVLVINYDRPAVLTIGILCW---AFSTAAVGASQHFLHVGMWRAVNGFGLAIVIPALQSFI 154 (502)
Q Consensus 78 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~---~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i 154 (502)
+|.+..+..+... -.++.+++.+++|.-+.+..+.++. +--.+....++|......+-.+.|.-.|....-...+-
T Consensus 49 ~GI~~laP~la~~-l~~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~TIvFtIPVa 127 (354)
T PF04346_consen 49 AGIMALAPVLAAF-LSPVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGATIVFTIPVA 127 (354)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhcccEEeehhhh
Confidence 4444444444443 4466788999999999988877764 33445566677766666665666655554433222222
Q ss_pred hhccC-CCCcchhhhHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHH
Q 010744 155 ADSYK-DGVRGAGFGLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVL 212 (502)
Q Consensus 155 ~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~ 212 (502)
-...+ ++++-.+.|+..... ..-+|.++++.+.. .+|...+.-...+.++
T Consensus 128 Lgii~k~D~~y~a~Gil~Gii--tIPiG~~vggl~~g------~~~~~il~Nl~Pvii~ 178 (354)
T PF04346_consen 128 LGIIEKEDHKYLAKGILAGII--TIPIGCFVGGLIAG------FDIGMILINLIPVIIF 178 (354)
T ss_pred hhhcChhhhHHHHHHHHHHHh--hhCHHHHHHHHHHh------CCHHHHHHHHHHHHHH
Confidence 22222 334444555443322 22344555555543 4555555444333333
No 355
>PRK10457 hypothetical protein; Provisional
Probab=22.77 E-value=3e+02 Score=19.76 Aligned_cols=40 Identities=18% Similarity=0.448 Sum_probs=17.3
Q ss_pred hhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHHHHHHHH
Q 010744 175 TMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSVLIAFLV 217 (502)
Q Consensus 175 ~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~~~~~~~ 217 (502)
-+|..+|..++..+-.. +..+|.+.-++.+++..+..+..
T Consensus 37 iiGA~iGg~l~~~~g~~---~~~g~~~~~~i~aviGAiill~i 76 (82)
T PRK10457 37 IVGAVVGGWISTFFGFG---KVDGFNFGSFVVAVIGAIVVLFI 76 (82)
T ss_pred HHHHHHHHHHHHHhCcc---ccccccHHHHHHHHHHHHHHHHH
Confidence 34555555554433211 12345444455555554444443
No 356
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=22.76 E-value=2.1e+02 Score=17.98 Aligned_cols=22 Identities=14% Similarity=0.324 Sum_probs=11.9
Q ss_pred ccchHHHHHHHHHHHHHHHHHH
Q 010744 197 PGWRCAFILMATLSVLIAFLVL 218 (502)
Q Consensus 197 ~~wr~~f~~~~~~~~~~~~~~~ 218 (502)
.++.+.-++.++++.+..+..+
T Consensus 22 ~~~~~~~~i~aviGAiill~i~ 43 (48)
T PF04226_consen 22 GGGSWGSFIVAVIGAIILLFIY 43 (48)
T ss_pred CCchHHHHHHHHHHHHHHHHHH
Confidence 3445555566666655555444
No 357
>PF10066 DUF2304: Uncharacterized conserved protein (DUF2304); InterPro: IPR019277 This entry represents hypothetical archaeal and bacterial proteins that have no known function.
Probab=21.94 E-value=3.7e+02 Score=20.61 Aligned_cols=18 Identities=6% Similarity=-0.049 Sum_probs=10.9
Q ss_pred hhhhhHHHHHHHHHHhcC
Q 010744 417 FSSFAAPLVGILSEKMFG 434 (502)
Q Consensus 417 ~~~~~~~~~g~l~~~~~~ 434 (502)
..++.|-+...+.+..|-
T Consensus 45 ~~~ifP~~~~~vA~~lGi 62 (115)
T PF10066_consen 45 ILSIFPNILDWVAKLLGI 62 (115)
T ss_pred HHHhhhhHHHHHHHHHCC
Confidence 344566667777776553
No 358
>PF06679 DUF1180: Protein of unknown function (DUF1180); InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Probab=21.48 E-value=1.1e+02 Score=25.23 Aligned_cols=19 Identities=21% Similarity=0.280 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 010744 453 LSRGLLSMMAVPFGLCCLF 471 (502)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~ 471 (502)
++.++++++++..++.+.+
T Consensus 94 l~R~~~Vl~g~s~l~i~yf 112 (163)
T PF06679_consen 94 LKRALYVLVGLSALAILYF 112 (163)
T ss_pred hhhhHHHHHHHHHHHHHHH
Confidence 3456666655544343333
No 359
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=21.40 E-value=1.2e+02 Score=22.88 Aligned_cols=29 Identities=21% Similarity=0.404 Sum_probs=22.2
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHhccCCc
Q 010744 197 PGWRCAFILMATLSVLIAFLVLVFVVDPR 225 (502)
Q Consensus 197 ~~wr~~f~~~~~~~~~~~~~~~~~~~~~~ 225 (502)
.+|+.+|++.-.++++.+.+.+...||..
T Consensus 57 e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 57 EGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 68999999987777777777776666644
No 360
>PF02447 GntP_permease: GntP family permease; InterPro: IPR003474 This is a family of integral membrane permeases that are involved in gluconate uptake. Escherichia coli contains several members of this family including GntU, a low affinity transporter [] and GntT, a high affinity transporter [].; GO: 0015128 gluconate transmembrane transporter activity, 0035429 gluconate transmembrane transport, 0016020 membrane
Probab=21.08 E-value=8.2e+02 Score=24.28 Aligned_cols=35 Identities=14% Similarity=0.377 Sum_probs=20.0
Q ss_pred hCCChhhHHHHHHHHHhhhccccc---------chhhhhhhhccccC
Q 010744 298 IGFDHSSTAALLSLFAIGCAVGSF---------LGGVVADRISQAYP 335 (502)
Q Consensus 298 ~g~s~~~~~~~~~~~~~~~~~~~~---------~~g~l~d~~g~~~~ 335 (502)
+|-.-...++ +..++.++|.+ +.-.+.+++|+|+.
T Consensus 54 fG~tl~~igi---vI~lG~~iG~~l~~SGaa~~IA~~l~~~~G~k~~ 97 (441)
T PF02447_consen 54 FGSTLGSIGI---VIALGAMIGKLLEESGAAERIANTLLKKFGEKRA 97 (441)
T ss_pred HHHHHHHHHH---HHHHHHHHHHHHHHcCHHHHHHHHHHHHcCCCcc
Confidence 5544334443 34555555555 34466778888875
No 361
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=20.99 E-value=4.6e+02 Score=23.68 Aligned_cols=10 Identities=30% Similarity=0.272 Sum_probs=6.3
Q ss_pred HHHHHHHHhc
Q 010744 424 LVGILSEKMF 433 (502)
Q Consensus 424 ~~g~l~~~~~ 433 (502)
+.|+...+.|
T Consensus 94 l~Gw~~grfG 103 (254)
T PF07857_consen 94 LTGWASGRFG 103 (254)
T ss_pred HHHHHHhhce
Confidence 5677766643
No 362
>COG5528 Predicted integral membrane protein [Function unknown]
Probab=20.97 E-value=2.4e+02 Score=21.98 Aligned_cols=45 Identities=18% Similarity=0.317 Sum_probs=25.5
Q ss_pred hhHHHHHHHHHHhcCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 010744 420 FAAPLVGILSEKMFGYDSKAIDPVMGSPREALALSRGLLSMMAVPFGLCCLFYTPLYKIFK 480 (502)
Q Consensus 420 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (502)
+..++.|+-..+.-+|.. ......+..+..++..++.+....+..
T Consensus 60 laqPvtG~aLa~~aG~pL----------------~~gWll~sl~LYvvtg~fWLpvvw~qm 104 (155)
T COG5528 60 LAQPVTGWALAHLAGWPL----------------GQGWLLFSLCLYVVTGIFWLPVVWRQM 104 (155)
T ss_pred HhccchHHHHHHHcCCCc----------------cchHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 555667776666666632 344455555556666666655444333
No 363
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=20.96 E-value=3.7e+02 Score=20.18 Aligned_cols=43 Identities=12% Similarity=0.203 Sum_probs=21.1
Q ss_pred hHHHHHHhhhhhHHHHHHHHHhhhcccCcccchHHHHHHHHHHH
Q 010744 168 GLLSLVGTMGGIGGGVLATIMAGHQFWGVPGWRCAFILMATLSV 211 (502)
Q Consensus 168 ~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~wr~~f~~~~~~~~ 211 (502)
|.......+..++|..+|-++=... ++...|-.+|++.++...
T Consensus 46 g~IG~~~v~pil~G~~lG~WLD~~~-~t~~~~tl~~lllGv~~G 88 (100)
T TIGR02230 46 GLIGWSVAIPTLLGVAVGIWLDRHY-PSPFSWTLTMLIVGVVIG 88 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc-CCCcHHHHHHHHHHHHHH
Confidence 3334444455566666666665441 112245555555554433
No 364
>PF13440 Polysacc_synt_3: Polysaccharide biosynthesis protein
Probab=20.82 E-value=5.7e+02 Score=22.29 Aligned_cols=32 Identities=16% Similarity=0.133 Sum_probs=19.2
Q ss_pred HHhhccCCCCcchhhhHHHHHHhhhhhHHHHH
Q 010744 153 FIADSYKDGVRGAGFGLLSLVGTMGGIGGGVL 184 (502)
Q Consensus 153 ~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~ 184 (502)
+.......++|.+..+.......+...+...+
T Consensus 109 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (251)
T PF13440_consen 109 LFRSILRARGRFRAYALIDIVRSLLRLLLLVL 140 (251)
T ss_pred HHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 33444556677777777777777666433333
No 365
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=20.24 E-value=1.6e+02 Score=23.59 Aligned_cols=24 Identities=17% Similarity=0.111 Sum_probs=18.7
Q ss_pred HHhhccCCCCcchhhhHHHHHHhh
Q 010744 153 FIADSYKDGVRGAGFGLLSLVGTM 176 (502)
Q Consensus 153 ~i~~~~~~~~r~~~~~~~~~~~~~ 176 (502)
-+.|++|++.|....+.+......
T Consensus 59 aLkdi~P~~~R~~i~~~~~~~~~~ 82 (137)
T PF04281_consen 59 ALKDIFPPSVRNWISSTVSTTSSA 82 (137)
T ss_pred HHhccCCHHHHHHHHHHHHHHHHH
Confidence 468999999999888877755443
Done!