Query 010747
Match_columns 502
No_of_seqs 140 out of 716
Neff 5.4
Searched_HMMs 13730
Date Mon Mar 25 13:25:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010747.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/010747hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2e74e1 f.23.24.1 (E:1-32) Pet 14.2 56 0.0041 20.0 2.4 21 481-501 10-30 (32)
2 d2fyuk1 f.23.15.1 (K:1-53) Sub 10.0 11 0.00081 26.7 -2.2 21 285-306 24-44 (53)
3 d1x3ha2 g.39.1.3 (A:43-74) Leu 5.6 1.1E+02 0.0078 19.2 1.2 16 347-362 7-22 (32)
4 d2axtl1 f.23.31.1 (L:1-37) Pho 5.1 2.1E+02 0.015 18.2 2.4 13 475-487 19-31 (37)
5 d2axtt1 f.23.34.1 (T:1-30) Pho 4.5 3.2E+02 0.023 16.3 2.8 20 393-412 4-23 (30)
6 d1q25a2 b.64.1.1 (A:130-280) C 3.5 1.9E+02 0.014 22.8 1.6 18 353-370 8-25 (151)
7 d2h8pc1 f.14.1.1 (C:22-78) Pot 3.4 6.5E+02 0.048 16.9 4.6 22 452-473 18-39 (57)
8 d1wmaa1 c.2.1.2 (A:2-276) Carb 3.0 1.5E+02 0.011 25.6 0.5 13 281-293 5-17 (275)
9 d1lnsa1 a.40.2.1 (A:1-145) X-P 2.9 2.1E+02 0.015 23.4 1.3 25 173-197 61-85 (145)
10 d1m0ka_ f.13.1.1 (A:) Bacterio 2.8 1.8E+02 0.013 25.3 0.6 48 317-370 165-212 (227)
No 1
>d2e74e1 f.23.24.1 (E:1-32) PetL subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=14.16 E-value=56 Score=20.00 Aligned_cols=21 Identities=38% Similarity=0.524 Sum_probs=12.7
Q ss_pred HHHHHHHHhhhhhheeccCCC
Q 010747 481 CAIAITFTLPIGIITAITNQV 501 (502)
Q Consensus 481 l~i~~i~~lP~gii~A~tn~~ 501 (502)
..++..|-+..|+|+|+-.+.
T Consensus 10 vfialffgiavgiifaiksik 30 (32)
T d2e74e1 10 VFIALFFGIAVGIIFAIKSIK 30 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhhheeeEEEEe
Confidence 345556666677777765543
No 2
>d2fyuk1 f.23.15.1 (K:1-53) Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) {Cow (Bos taurus) [TaxId: 9913]}
Probab=10.05 E-value=11 Score=26.66 Aligned_cols=21 Identities=19% Similarity=0.395 Sum_probs=17.5
Q ss_pred ccccccccccccccchhhhhhh
Q 010747 285 GSGLYGLGVAAVGIDWSTISSY 306 (502)
Q Consensus 285 fGg~~GLGl~p~tfDW~~I~~~ 306 (502)
||+..|+|+.=+| ||-.|..|
T Consensus 24 ~G~a~gl~lvy~T-DWklil~y 44 (53)
T d2fyuk1 24 WGAVGAVGLVWAT-DWRLILDW 44 (53)
T ss_dssp HHHHHHHHHHHHH-TCHHHHTS
T ss_pred hhhhhheeeeeee-hHHHHHhh
Confidence 6788899988778 99998766
No 3
>d1x3ha2 g.39.1.3 (A:43-74) Leupaxin {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.65 E-value=1.1e+02 Score=19.22 Aligned_cols=16 Identities=19% Similarity=0.453 Sum_probs=13.8
Q ss_pred ccCcccccccCCCcee
Q 010747 347 FPIFSDQLFTTTGREY 362 (502)
Q Consensus 347 ~Pi~S~~lfd~~G~~Y 362 (502)
-||.+.+-|..+|++|
T Consensus 7 ~PF~~~~Fy~~~g~Py 22 (32)
T d1x3ha2 7 TSFSTGSFFELDGRPF 22 (32)
T ss_dssp CBSCSSCCEESSSCEE
T ss_pred CcCCCCCeEeECCccc
Confidence 4888888899999988
No 4
>d2axtl1 f.23.31.1 (L:1-37) Photosystem II reaction center protein L, PsbL {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=5.14 E-value=2.1e+02 Score=18.19 Aligned_cols=13 Identities=38% Similarity=0.697 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHH
Q 010747 475 WGVLLACAIAITF 487 (502)
Q Consensus 475 Wgl~~al~i~~i~ 487 (502)
||+++.+++++.|
T Consensus 19 ~GlLlifvl~vLF 31 (37)
T d2axtl1 19 LGLLLILVLALLF 31 (37)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6666666666554
No 5
>d2axtt1 f.23.34.1 (T:1-30) Photosystem II reaction center protein T, PsbT {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=4.47 E-value=3.2e+02 Score=16.26 Aligned_cols=20 Identities=30% Similarity=0.441 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHhHhhhhhhh
Q 010747 393 TTYGLGFAALTATIVHVALF 412 (502)
Q Consensus 393 ~~y~~~fa~~ta~i~h~~L~ 412 (502)
++|.+-||++-+.+...+.|
T Consensus 4 i~yv~ifac~i~lfffaiff 23 (30)
T d2axtt1 4 ITYVFIFACIIALFFFAIFF 23 (30)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred eehHHHHHHHHHHHHHHHHh
Confidence 56778899998888776665
No 6
>d1q25a2 b.64.1.1 (A:130-280) Cation-independent mannose-6-phosphate receptor (MIR-receptor) {Cow (Bos taurus) [TaxId: 9913]}
Probab=3.53 E-value=1.9e+02 Score=22.78 Aligned_cols=18 Identities=11% Similarity=0.292 Sum_probs=14.1
Q ss_pred ccccCCCceeecceecCC
Q 010747 353 QLFTTTGREYNITAIIDS 370 (502)
Q Consensus 353 ~lfd~~G~~Ynvs~Vl~~ 370 (502)
.++|.+|+.||.+...+.
T Consensus 8 ~v~d~~g~~fDLspL~~~ 25 (151)
T d1q25a2 8 YAFDRELKKHDLNPLIKT 25 (151)
T ss_dssp EEECTTCCEEECGGGCCS
T ss_pred EEECCCCCEEeCchhhcc
Confidence 357888999999988644
No 7
>d2h8pc1 f.14.1.1 (C:22-78) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]}
Probab=3.44 E-value=6.5e+02 Score=16.94 Aligned_cols=22 Identities=18% Similarity=-0.004 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCcc
Q 010747 452 LLINIAATVFACEYYNDQLQLP 473 (502)
Q Consensus 452 l~vs~~l~i~~~~~~~~~t~lP 473 (502)
+++-+...+...|.-..+.+.+
T Consensus 18 ~i~~~s~~~y~~E~~~~~~~f~ 39 (57)
T d2h8pc1 18 VLLAGSYLAVLAERGAPGAQLI 39 (57)
T ss_dssp HHHHHHHHHHHHHTTSTTCCCC
T ss_pred HHHHHHHHHHHHhcCCCCcccc
Confidence 3333344444445433344454
No 8
>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.05 E-value=1.5e+02 Score=25.59 Aligned_cols=13 Identities=31% Similarity=0.521 Sum_probs=7.7
Q ss_pred EEEeccccccccc
Q 010747 281 AQQVGSGLYGLGV 293 (502)
Q Consensus 281 ~~~lfGg~~GLGl 293 (502)
|..|+||+.|+|+
T Consensus 5 VAlVTGas~GIG~ 17 (275)
T d1wmaa1 5 VALVTGGNKGIGL 17 (275)
T ss_dssp EEEESSCSSHHHH
T ss_pred EEEECCCCCHHHH
Confidence 4556666666664
No 9
>d1lnsa1 a.40.2.1 (A:1-145) X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=2.94 E-value=2.1e+02 Score=23.45 Aligned_cols=25 Identities=20% Similarity=0.227 Sum_probs=21.0
Q ss_pred HHhccCchHHHHHHHHHHHhhhhhh
Q 010747 173 VFYKQHFTFFVSLLVVFTTQVLGFG 197 (502)
Q Consensus 173 lfy~~~~~~~~~ill~lstQliGyG 197 (502)
-|++.+-.....++..++-|++||-
T Consensus 61 ~fl~s~~~lt~~vFY~VALQLLgF~ 85 (145)
T d1lnsa1 61 EFLKSSIELDWEIFWNIALQLLDFV 85 (145)
T ss_dssp HHHHSSCCCCHHHHHHHHHHHTTCC
T ss_pred HHHcCCCcCCHHHHHHHHHHHcCCc
Confidence 4788887788888999999999984
No 10
>d1m0ka_ f.13.1.1 (A:) Bacteriorhodopsin {Archaeon Halobacterium salinarum [TaxId: 2242]}
Probab=2.78 E-value=1.8e+02 Score=25.25 Aligned_cols=48 Identities=15% Similarity=0.311 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccccCCcCccCcccccccCCCceeecceecCC
Q 010747 317 ATANVAAGFVLVMYVLTPLCYWLNIYNAKTFPIFSDQLFTTTGREYNITAIIDS 370 (502)
Q Consensus 317 a~~N~~~G~v~~~~ii~p~lyy~N~w~s~~~Pi~S~~lfd~~G~~Ynvs~Vl~~ 370 (502)
...|.+..+++..|.+.|+.|--+.......+..+.+++ ||+-++++|
T Consensus 165 ~~~~~l~~~~~v~W~iYPI~~~l~~~g~~~i~~~~~~i~------Y~ilDi~aK 212 (227)
T d1m0ka_ 165 STFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLL------FMVLDVSAK 212 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTTTCCSCHHHHHHH------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCccChHHHHHH------HHHHHHHHH
Done!