Query 010748
Match_columns 502
No_of_seqs 794 out of 4248
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 13:26:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010748.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010748hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 100.0 2.5E-44 8.7E-49 349.6 37.7 301 138-483 29-333 (344)
2 4g56_B MGC81050 protein; prote 100.0 6.2E-43 2.1E-47 342.2 36.2 304 137-489 40-351 (357)
3 1vyh_C Platelet-activating fac 100.0 2.4E-42 8.2E-47 344.6 36.3 287 136-480 105-410 (410)
4 3ow8_A WD repeat-containing pr 100.0 3.8E-41 1.3E-45 324.5 35.1 287 136-479 29-319 (321)
5 1got_B GT-beta; complex (GTP-b 100.0 1.2E-40 4.2E-45 323.8 38.3 286 137-478 53-340 (340)
6 3iz6_a 40S ribosomal protein R 100.0 6.2E-41 2.1E-45 331.0 34.6 299 136-484 63-378 (380)
7 2pbi_B Guanine nucleotide-bind 100.0 1.2E-39 4E-44 318.6 40.4 290 137-478 62-354 (354)
8 2ynn_A Coatomer subunit beta'; 100.0 3.8E-40 1.3E-44 315.1 35.8 289 137-482 11-303 (304)
9 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.5E-39 5.1E-44 316.8 36.2 308 137-487 13-341 (345)
10 2ynn_A Coatomer subunit beta'; 100.0 1.8E-38 6.3E-43 303.4 35.4 250 194-491 17-269 (304)
11 1erj_A Transcriptional repress 100.0 5.3E-38 1.8E-42 311.4 37.5 299 137-482 62-390 (393)
12 4ery_A WD repeat-containing pr 100.0 8.3E-38 2.8E-42 299.9 36.3 287 136-480 20-311 (312)
13 3frx_A Guanine nucleotide-bind 100.0 1.2E-37 4.2E-42 299.8 36.6 288 136-482 14-318 (319)
14 1vyh_C Platelet-activating fac 100.0 6.6E-38 2.3E-42 312.5 35.1 250 194-492 112-380 (410)
15 2hes_X YDR267CP; beta-propelle 100.0 1E-37 3.4E-42 301.9 34.3 305 137-481 12-328 (330)
16 1nr0_A Actin interacting prote 100.0 2.3E-37 8E-42 324.4 37.6 293 138-487 17-361 (611)
17 3ow8_A WD repeat-containing pr 100.0 2.7E-37 9.3E-42 297.5 34.5 256 193-492 35-290 (321)
18 2xzm_R RACK1; ribosome, transl 100.0 8.3E-37 2.8E-41 297.1 37.9 290 137-483 19-342 (343)
19 2pm9_A Protein WEB1, protein t 100.0 7.8E-38 2.7E-42 312.0 28.5 301 138-486 11-342 (416)
20 4aez_A CDC20, WD repeat-contai 100.0 2.5E-36 8.6E-41 300.2 36.7 300 137-494 89-393 (401)
21 1nr0_A Actin interacting prote 100.0 2E-36 6.8E-41 317.4 37.2 299 136-484 56-400 (611)
22 3i2n_A WD repeat-containing pr 100.0 1.1E-36 3.7E-41 297.0 32.8 296 137-484 16-356 (357)
23 3k26_A Polycomb protein EED; W 100.0 7.4E-37 2.5E-41 299.1 31.2 306 136-481 15-366 (366)
24 1got_B GT-beta; complex (GTP-b 100.0 3.8E-36 1.3E-40 292.1 35.1 250 194-492 59-312 (340)
25 1gxr_A ESG1, transducin-like e 100.0 2.5E-35 8.7E-40 284.7 39.2 288 137-480 49-336 (337)
26 2pm9_A Protein WEB1, protein t 100.0 7.4E-37 2.5E-41 304.9 28.4 304 137-482 65-415 (416)
27 2ymu_A WD-40 repeat protein; u 100.0 4.4E-36 1.5E-40 312.7 34.6 278 136-478 300-577 (577)
28 4g56_B MGC81050 protein; prote 100.0 1.3E-36 4.5E-41 297.3 27.7 252 194-487 46-307 (357)
29 4gqb_B Methylosome protein 50; 100.0 7.2E-36 2.4E-40 290.1 32.7 251 138-438 81-333 (344)
30 2pm7_B Protein transport prote 100.0 1.6E-35 5.6E-40 282.0 34.2 249 194-481 13-285 (297)
31 3vl1_A 26S proteasome regulato 100.0 4E-36 1.4E-40 300.2 30.1 286 140-483 57-367 (420)
32 2pbi_B Guanine nucleotide-bind 100.0 2.8E-35 9.5E-40 287.6 35.0 252 194-492 68-326 (354)
33 1r5m_A SIR4-interacting protei 100.0 8.9E-36 3.1E-40 297.3 31.4 289 138-483 44-363 (425)
34 1sq9_A Antiviral protein SKI8; 100.0 8.8E-36 3E-40 295.3 30.1 293 136-483 13-397 (397)
35 3ei3_B DNA damage-binding prot 100.0 2.4E-35 8.2E-40 291.1 32.6 290 136-481 70-382 (383)
36 2ymu_A WD-40 repeat protein; u 100.0 6.3E-35 2.2E-39 303.9 37.1 291 136-492 259-549 (577)
37 1k8k_C P40, ARP2/3 complex 41 100.0 6.4E-36 2.2E-40 293.4 27.9 294 138-485 7-365 (372)
38 4aow_A Guanine nucleotide-bind 100.0 1.6E-34 5.4E-39 279.8 37.4 292 136-483 35-339 (340)
39 1gxr_A ESG1, transducin-like e 100.0 9.3E-35 3.2E-39 280.8 34.5 292 138-486 8-301 (337)
40 2xyi_A Probable histone-bindin 100.0 2.3E-34 7.9E-39 288.8 38.3 263 188-482 126-411 (430)
41 2j04_B YDR362CP, TAU91; beta p 100.0 2E-35 6.7E-40 301.6 30.5 311 138-482 132-518 (524)
42 3zwl_B Eukaryotic translation 100.0 1E-34 3.4E-39 284.1 34.0 290 137-487 30-352 (369)
43 1erj_A Transcriptional repress 100.0 2.8E-34 9.6E-39 284.7 37.4 270 192-492 66-352 (393)
44 3iz6_a 40S ribosomal protein R 100.0 9E-36 3.1E-40 294.0 26.4 250 194-488 70-336 (380)
45 3odt_A Protein DOA1; ubiquitin 100.0 1.9E-34 6.5E-39 275.7 34.0 287 136-487 15-302 (313)
46 3fm0_A Protein CIAO1; WDR39,SG 100.0 7E-35 2.4E-39 283.7 31.3 247 194-483 20-285 (345)
47 4h5i_A Guanine nucleotide-exch 100.0 9.3E-35 3.2E-39 285.0 32.2 306 141-487 16-349 (365)
48 4e54_B DNA damage-binding prot 100.0 1.9E-35 6.3E-40 297.2 27.7 290 137-484 117-433 (435)
49 3dm0_A Maltose-binding peripla 100.0 2.1E-34 7.2E-39 306.8 37.4 287 137-481 380-693 (694)
50 3dwl_C Actin-related protein 2 100.0 6.6E-36 2.2E-40 294.3 23.0 293 138-479 10-377 (377)
51 1r5m_A SIR4-interacting protei 100.0 1.2E-34 4.1E-39 289.2 31.7 298 138-480 107-424 (425)
52 4ery_A WD repeat-containing pr 100.0 3.4E-34 1.2E-38 274.7 33.4 249 194-492 27-279 (312)
53 3frx_A Guanine nucleotide-bind 100.0 2.7E-34 9.2E-39 276.5 32.5 248 194-488 21-274 (319)
54 4gga_A P55CDC, cell division c 100.0 2.2E-33 7.6E-38 280.7 40.4 290 140-490 106-404 (420)
55 2xzm_R RACK1; ribosome, transl 100.0 7.7E-34 2.6E-38 276.2 33.3 243 207-486 37-290 (343)
56 3bg1_A Protein SEC13 homolog; 100.0 4.6E-35 1.6E-39 281.4 22.8 249 194-481 17-293 (316)
57 3f3f_A Nucleoporin SEH1; struc 100.0 1.3E-33 4.3E-38 273.5 33.1 255 194-487 15-343 (351)
58 2hes_X YDR267CP; beta-propelle 100.0 1.8E-33 6E-38 272.1 31.4 244 194-483 18-282 (330)
59 3gre_A Serine/threonine-protei 100.0 3.1E-34 1.1E-38 288.3 26.9 300 136-478 60-437 (437)
60 4a11_B DNA excision repair pro 100.0 8E-33 2.7E-37 274.5 35.6 303 137-488 41-372 (408)
61 3dw8_B Serine/threonine-protei 100.0 4.1E-33 1.4E-37 280.6 33.2 319 137-480 26-445 (447)
62 3mkq_A Coatomer beta'-subunit; 100.0 3.1E-33 1E-37 303.1 34.4 291 137-484 11-305 (814)
63 3jrp_A Fusion protein of prote 100.0 2.5E-33 8.4E-38 275.4 30.5 250 194-482 15-288 (379)
64 3vl1_A 26S proteasome regulato 100.0 1.9E-33 6.4E-38 280.8 28.8 286 140-481 98-419 (420)
65 1yfq_A Cell cycle arrest prote 100.0 7E-33 2.4E-37 268.6 31.6 285 137-478 9-321 (342)
66 4ggc_A P55CDC, cell division c 100.0 8.8E-32 3E-36 257.9 38.6 280 142-482 28-316 (318)
67 4e54_B DNA damage-binding prot 100.0 2.9E-33 9.8E-38 281.3 26.4 257 193-493 122-399 (435)
68 2pm7_B Protein transport prote 100.0 1.5E-32 5.2E-37 261.4 29.5 255 136-436 6-285 (297)
69 3dm0_A Maltose-binding peripla 100.0 1.8E-32 6.2E-37 291.9 33.2 250 194-489 386-640 (694)
70 2aq5_A Coronin-1A; WD40 repeat 100.0 1.6E-32 5.5E-37 272.8 30.7 296 141-484 36-345 (402)
71 3v7d_B Cell division control p 100.0 2.8E-32 9.5E-37 276.3 32.2 288 137-491 119-431 (464)
72 3sfz_A APAF-1, apoptotic pepti 100.0 2.2E-32 7.5E-37 309.8 34.8 295 136-486 612-1039(1249)
73 2j04_B YDR362CP, TAU91; beta p 100.0 2.5E-33 8.5E-38 286.1 24.1 238 207-482 171-429 (524)
74 1p22_A F-BOX/WD-repeat protein 100.0 2.1E-32 7.2E-37 275.0 29.7 280 137-487 131-420 (435)
75 3dwl_C Actin-related protein 2 100.0 2.1E-33 7.1E-38 276.4 21.0 249 193-480 14-280 (377)
76 2aq5_A Coronin-1A; WD40 repeat 100.0 2.8E-32 9.6E-37 271.1 28.7 245 206-484 43-302 (402)
77 1k8k_C P40, ARP2/3 complex 41 100.0 4.9E-32 1.7E-36 265.7 29.3 248 194-481 12-274 (372)
78 1sq9_A Antiviral protein SKI8; 100.0 5.9E-32 2E-36 267.8 29.4 250 194-489 20-330 (397)
79 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3E-31 1E-35 267.3 34.9 280 137-488 116-398 (445)
80 3bg1_A Protein SEC13 homolog; 100.0 9.9E-33 3.4E-37 265.1 23.0 256 136-435 10-292 (316)
81 1pgu_A Actin interacting prote 100.0 1.5E-31 5.3E-36 280.1 33.1 303 137-491 16-338 (615)
82 3mmy_A MRNA export factor; mRN 100.0 6.2E-32 2.1E-36 264.1 28.1 290 136-482 36-347 (368)
83 3dw8_B Serine/threonine-protei 100.0 7.5E-32 2.6E-36 271.4 28.5 258 193-485 31-377 (447)
84 4aow_A Guanine nucleotide-bind 100.0 6.7E-31 2.3E-35 254.3 33.6 249 194-488 42-293 (340)
85 3zwl_B Eukaryotic translation 100.0 1.6E-30 5.3E-35 254.2 36.4 247 194-491 36-314 (369)
86 2xyi_A Probable histone-bindin 100.0 1.2E-31 4.1E-36 269.0 28.7 267 137-437 126-411 (430)
87 3ei3_B DNA damage-binding prot 100.0 2.1E-31 7.1E-36 262.9 29.5 253 194-491 77-349 (383)
88 3mkq_A Coatomer beta'-subunit; 100.0 3.2E-31 1.1E-35 287.3 33.6 250 193-491 16-269 (814)
89 2oaj_A Protein SNI1; WD40 repe 100.0 1.3E-31 4.3E-36 291.6 28.4 307 138-483 57-521 (902)
90 1yfq_A Cell cycle arrest prote 100.0 3.1E-31 1E-35 257.0 28.0 248 194-491 15-292 (342)
91 3gre_A Serine/threonine-protei 100.0 2.7E-32 9.3E-37 274.1 21.0 255 193-491 66-369 (437)
92 4gq1_A NUP37; propeller, trans 100.0 2.1E-31 7.2E-36 263.9 26.6 249 206-481 98-389 (393)
93 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.5E-30 5.1E-35 262.2 32.9 277 137-482 157-443 (445)
94 3sfz_A APAF-1, apoptotic pepti 100.0 2.5E-31 8.4E-36 301.2 30.1 301 136-491 879-1217(1249)
95 3k26_A Polycomb protein EED; W 100.0 1.5E-31 5E-36 261.4 23.5 261 194-486 22-323 (366)
96 3v7d_B Cell division control p 100.0 4.7E-30 1.6E-34 259.8 34.8 232 208-487 131-387 (464)
97 3i2n_A WD repeat-containing pr 100.0 7.6E-31 2.6E-35 255.5 27.7 247 192-484 20-294 (357)
98 3jro_A Fusion protein of prote 100.0 3E-31 1E-35 284.4 26.8 251 194-483 13-287 (753)
99 1pgu_A Actin interacting prote 100.0 2.4E-30 8.2E-35 271.0 32.4 281 136-480 60-365 (615)
100 4aez_A CDC20, WD repeat-contai 100.0 6.1E-30 2.1E-34 254.2 32.2 234 209-486 103-341 (401)
101 2vdu_B TRNA (guanine-N(7)-)-me 100.0 8.8E-30 3E-34 257.0 33.2 241 193-481 105-391 (450)
102 3f3f_A Nucleoporin SEH1; struc 100.0 4.7E-30 1.6E-34 248.3 29.1 271 136-438 8-339 (351)
103 3odt_A Protein DOA1; ubiquitin 100.0 9.8E-30 3.3E-34 242.9 30.1 235 207-491 27-265 (313)
104 4gga_A P55CDC, cell division c 100.0 1E-28 3.5E-33 246.9 37.2 252 194-492 109-364 (420)
105 3vu4_A KMHSV2; beta-propeller 100.0 8.5E-30 2.9E-34 248.8 28.6 283 136-487 16-342 (355)
106 1p22_A F-BOX/WD-repeat protein 100.0 3.4E-29 1.2E-33 251.5 32.6 224 207-483 141-367 (435)
107 4a11_B DNA excision repair pro 100.0 6.8E-29 2.3E-33 246.2 30.7 288 137-481 97-405 (408)
108 3lrv_A PRE-mRNA-splicing facto 100.0 1.4E-29 4.8E-34 246.1 25.1 233 206-485 45-296 (343)
109 2j04_A TAU60, YPL007P, hypothe 100.0 2E-29 6.8E-34 251.7 26.3 264 138-480 14-296 (588)
110 2vdu_B TRNA (guanine-N(7)-)-me 100.0 6.9E-29 2.3E-33 250.4 30.4 207 263-482 99-342 (450)
111 3lrv_A PRE-mRNA-splicing facto 100.0 7.1E-29 2.4E-33 241.0 28.6 282 143-481 40-333 (343)
112 3mmy_A MRNA export factor; mRN 100.0 8.3E-29 2.8E-33 241.8 28.3 251 193-491 42-314 (368)
113 3jrp_A Fusion protein of prote 100.0 7.5E-29 2.6E-33 243.3 27.9 213 261-483 6-242 (379)
114 1l0q_A Surface layer protein; 100.0 4.5E-28 1.5E-32 239.5 33.5 279 152-491 3-285 (391)
115 2oaj_A Protein SNI1; WD40 repe 100.0 1.1E-28 3.8E-33 268.4 30.1 238 192-479 19-310 (902)
116 3jro_A Fusion protein of prote 100.0 1E-29 3.5E-34 272.5 21.7 257 136-436 6-285 (753)
117 4ggc_A P55CDC, cell division c 100.0 1.9E-27 6.5E-32 227.7 35.2 252 194-492 29-284 (318)
118 3bws_A Protein LP49; two-domai 100.0 7.1E-28 2.4E-32 241.4 33.2 283 140-481 123-432 (433)
119 3bws_A Protein LP49; two-domai 100.0 1.3E-27 4.4E-32 239.6 32.7 301 139-488 60-397 (433)
120 4gq1_A NUP37; propeller, trans 100.0 7.2E-29 2.5E-33 245.7 21.6 297 184-492 9-359 (393)
121 3vu4_A KMHSV2; beta-propeller 100.0 1.7E-27 5.9E-32 232.4 30.5 239 193-483 22-273 (355)
122 4h5i_A Guanine nucleotide-exch 100.0 1.3E-27 4.5E-32 234.1 27.0 263 189-491 13-310 (365)
123 2j04_A TAU60, YPL007P, hypothe 100.0 3.1E-27 1.1E-31 235.9 22.6 237 193-492 18-265 (588)
124 2w18_A PALB2, fancn, partner a 99.9 2.7E-26 9.1E-31 215.6 24.6 198 265-479 110-355 (356)
125 1l0q_A Surface layer protein; 99.9 1.5E-25 5.2E-30 221.3 29.5 238 209-489 2-241 (391)
126 2w18_A PALB2, fancn, partner a 99.9 5.8E-26 2E-30 213.3 23.3 187 207-434 143-355 (356)
127 1nir_A Nitrite reductase; hemo 99.9 2.6E-23 8.8E-28 213.7 30.0 310 142-490 181-523 (543)
128 1nir_A Nitrite reductase; hemo 99.9 3.1E-23 1.1E-27 213.1 30.2 287 145-488 143-465 (543)
129 1ri6_A Putative isomerase YBHE 99.9 3E-23 1E-27 200.5 27.0 284 151-480 4-307 (343)
130 2hqs_A Protein TOLB; TOLB, PAL 99.9 5.8E-23 2E-27 204.5 29.1 230 209-488 143-393 (415)
131 3u4y_A Uncharacterized protein 99.9 2.8E-22 9.6E-27 193.1 31.3 283 145-483 3-306 (331)
132 2hqs_A Protein TOLB; TOLB, PAL 99.9 5.5E-22 1.9E-26 197.5 30.9 268 138-463 116-411 (415)
133 2ecf_A Dipeptidyl peptidase IV 99.9 2E-22 6.7E-27 216.1 29.7 294 139-481 36-413 (741)
134 3hfq_A Uncharacterized protein 99.9 8.3E-21 2.8E-25 184.2 30.5 290 153-485 4-323 (347)
135 2oit_A Nucleoporin 214KDA; NH2 99.9 2.2E-21 7.6E-26 193.9 26.5 218 139-385 36-279 (434)
136 3vgz_A Uncharacterized protein 99.9 1.6E-20 5.6E-25 182.2 31.1 286 139-470 40-334 (353)
137 2ojh_A Uncharacterized protein 99.9 1.9E-21 6.6E-26 183.2 22.9 234 191-471 42-293 (297)
138 2z3z_A Dipeptidyl aminopeptida 99.9 1.7E-20 5.8E-25 199.9 31.1 296 140-483 82-437 (706)
139 2ojh_A Uncharacterized protein 99.9 4.3E-21 1.5E-25 180.8 22.9 228 214-484 17-261 (297)
140 3scy_A Hypothetical bacterial 99.9 7E-20 2.4E-24 178.7 31.5 294 146-484 8-342 (361)
141 1ri6_A Putative isomerase YBHE 99.9 5.2E-20 1.8E-24 177.6 29.8 278 138-461 36-334 (343)
142 3u4y_A Uncharacterized protein 99.9 1.9E-20 6.6E-25 180.2 26.0 243 206-484 6-255 (331)
143 1pby_B Quinohemoprotein amine 99.9 2.4E-20 8.1E-25 179.6 26.3 278 152-489 2-318 (337)
144 1xfd_A DIP, dipeptidyl aminope 99.9 8.7E-21 3E-25 202.7 25.3 290 141-482 18-394 (723)
145 3vgz_A Uncharacterized protein 99.9 2.1E-20 7E-25 181.5 25.5 240 206-488 49-310 (353)
146 2oit_A Nucleoporin 214KDA; NH2 99.9 5.9E-21 2E-25 190.8 21.8 250 206-481 45-333 (434)
147 2ecf_A Dipeptidyl peptidase IV 99.9 4.1E-20 1.4E-24 198.0 28.2 289 140-482 109-460 (741)
148 1jmx_B Amine dehydrogenase; ox 99.9 1.1E-19 3.8E-24 175.9 26.2 248 203-488 5-332 (349)
149 1k32_A Tricorn protease; prote 99.9 7.5E-20 2.6E-24 203.2 27.9 290 137-482 201-503 (1045)
150 1k32_A Tricorn protease; prote 99.9 8.9E-20 3.1E-24 202.6 27.1 286 139-483 295-639 (1045)
151 1xfd_A DIP, dipeptidyl aminope 99.9 2.1E-19 7.2E-24 192.0 28.8 306 141-484 62-446 (723)
152 2z3z_A Dipeptidyl aminopeptida 99.8 7.3E-19 2.5E-23 187.3 26.5 281 141-483 27-393 (706)
153 3o4h_A Acylamino-acid-releasin 99.8 5.2E-19 1.8E-23 184.1 24.4 274 139-481 21-315 (582)
154 3hfq_A Uncharacterized protein 99.8 1.7E-17 5.6E-22 160.9 32.2 267 140-441 40-324 (347)
155 1jof_A Carboxy-CIS,CIS-muconat 99.8 8.7E-18 3E-22 164.2 26.5 282 153-482 4-342 (365)
156 1pby_B Quinohemoprotein amine 99.8 2.7E-18 9.1E-23 165.2 21.9 234 210-488 2-276 (337)
157 3scy_A Hypothetical bacterial 99.8 7.2E-17 2.5E-21 157.3 31.7 287 138-458 48-360 (361)
158 3pe7_A Oligogalacturonate lyas 99.8 6.5E-18 2.2E-22 166.2 24.2 287 142-481 38-382 (388)
159 3o4h_A Acylamino-acid-releasin 99.8 8.4E-19 2.9E-23 182.5 17.8 227 206-485 30-278 (582)
160 1z68_A Fibroblast activation p 99.8 7.4E-18 2.5E-22 179.9 25.5 299 142-485 62-447 (719)
161 1z68_A Fibroblast activation p 99.8 1.7E-18 5.9E-23 184.8 19.5 282 143-481 19-391 (719)
162 1jmx_B Amine dehydrogenase; ox 99.8 1.9E-16 6.5E-21 153.0 25.4 238 144-439 4-328 (349)
163 3c5m_A Oligogalacturonate lyas 99.7 1.2E-16 4E-21 157.5 22.6 300 140-480 36-381 (396)
164 3pe7_A Oligogalacturonate lyas 99.7 1.1E-15 3.9E-20 150.1 26.7 242 203-484 41-332 (388)
165 1q7f_A NHL, brain tumor CG1071 99.7 6.4E-15 2.2E-19 138.5 30.0 237 206-484 38-283 (286)
166 1jof_A Carboxy-CIS,CIS-muconat 99.7 5.5E-15 1.9E-19 144.3 29.5 249 140-438 40-343 (365)
167 3fvz_A Peptidyl-glycine alpha- 99.7 2.8E-15 9.7E-20 144.1 27.0 202 264-482 88-323 (329)
168 2oiz_A Aromatic amine dehydrog 99.7 9.7E-15 3.3E-19 142.2 28.4 271 167-488 32-343 (361)
169 4a5s_A Dipeptidyl peptidase 4 99.7 4.3E-16 1.5E-20 166.7 19.7 242 206-484 25-356 (740)
170 4a5s_A Dipeptidyl peptidase 4 99.7 4.5E-15 1.5E-19 158.7 27.1 287 141-479 18-396 (740)
171 2xdw_A Prolyl endopeptidase; a 99.7 3.6E-14 1.2E-18 151.0 32.2 289 149-483 81-416 (710)
172 3azo_A Aminopeptidase; POP fam 99.7 6.7E-15 2.3E-19 155.4 26.0 297 138-484 22-372 (662)
173 2dg1_A DRP35, lactonase; beta 99.7 1E-13 3.5E-18 133.2 30.9 269 140-470 6-300 (333)
174 2oiz_A Aromatic amine dehydrog 99.7 8.7E-14 3E-18 135.4 28.8 263 144-462 54-360 (361)
175 1rwi_B Serine/threonine-protei 99.7 5.5E-14 1.9E-18 130.7 26.1 235 206-484 32-267 (270)
176 2bkl_A Prolyl endopeptidase; m 99.6 3.8E-14 1.3E-18 150.4 27.6 284 148-484 76-400 (695)
177 2gop_A Trilobed protease; beta 99.6 1E-13 3.4E-18 134.0 28.2 264 140-480 15-330 (347)
178 3fvz_A Peptidyl-glycine alpha- 99.6 2.9E-14 9.9E-19 137.0 24.1 257 140-436 24-322 (329)
179 3c5m_A Oligogalacturonate lyas 99.6 6.3E-15 2.1E-19 145.0 18.0 234 203-484 41-332 (396)
180 2z2n_A Virginiamycin B lyase; 99.6 2.5E-12 8.7E-17 121.0 34.9 281 139-482 14-296 (299)
181 1q7f_A NHL, brain tumor CG1071 99.6 6.8E-13 2.3E-17 124.5 28.0 242 138-438 28-282 (286)
182 1qks_A Cytochrome CD1 nitrite 99.6 4.9E-13 1.7E-17 137.0 28.4 311 141-489 198-546 (567)
183 3e5z_A Putative gluconolactona 99.6 4.9E-13 1.7E-17 126.2 25.2 227 206-483 36-288 (296)
184 3azo_A Aminopeptidase; POP fam 99.6 5.1E-14 1.7E-18 148.6 19.6 249 144-439 81-372 (662)
185 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 2.8E-12 9.5E-17 121.9 28.2 248 193-482 20-300 (314)
186 1qks_A Cytochrome CD1 nitrite 99.6 4.6E-12 1.6E-16 129.8 31.3 279 149-482 165-478 (567)
187 2xdw_A Prolyl endopeptidase; a 99.6 2.9E-12 1E-16 136.3 30.9 254 138-438 123-416 (710)
188 3dsm_A Uncharacterized protein 99.6 8.8E-13 3E-17 126.5 24.2 235 208-488 53-308 (328)
189 2dg1_A DRP35, lactonase; beta 99.5 1.1E-12 3.8E-17 126.0 24.4 236 205-486 13-267 (333)
190 1rwi_B Serine/threonine-protei 99.5 1.3E-12 4.4E-17 121.4 23.8 241 141-438 25-266 (270)
191 1yr2_A Prolyl oligopeptidase; 99.5 2.9E-12 9.8E-17 137.0 28.2 288 148-483 115-443 (741)
192 3no2_A Uncharacterized protein 99.5 4.3E-12 1.5E-16 118.4 25.8 211 208-468 4-230 (276)
193 2mad_H Methylamine dehydrogena 99.5 4.8E-11 1.7E-15 116.2 32.4 292 146-488 27-357 (373)
194 2qc5_A Streptogramin B lactona 99.5 5.5E-11 1.9E-15 111.8 31.2 277 140-479 20-298 (300)
195 2gop_A Trilobed protease; beta 99.5 2.9E-12 9.8E-17 123.7 22.3 228 140-435 59-330 (347)
196 3sjl_D Methylamine dehydrogena 99.5 1.7E-11 6E-16 118.1 27.3 295 145-489 38-371 (386)
197 3e5z_A Putative gluconolactona 99.5 8.6E-12 2.9E-16 117.6 24.5 204 264-487 25-251 (296)
198 2z2n_A Virginiamycin B lyase; 99.5 7.7E-11 2.6E-15 110.8 30.2 229 206-479 23-253 (299)
199 2bkl_A Prolyl endopeptidase; m 99.5 5.8E-12 2E-16 133.7 24.1 257 137-442 118-403 (695)
200 3hrp_A Uncharacterized protein 99.4 4.1E-11 1.4E-15 118.3 25.9 230 206-479 139-408 (409)
201 3dsm_A Uncharacterized protein 99.4 2.1E-11 7.1E-16 116.9 23.1 199 267-487 44-259 (328)
202 3g4e_A Regucalcin; six bladed 99.4 9.3E-11 3.2E-15 110.7 26.7 226 206-471 21-263 (297)
203 3no2_A Uncharacterized protein 99.4 1.8E-11 6.2E-16 114.1 20.8 188 280-489 6-203 (276)
204 1xip_A Nucleoporin NUP159; bet 99.4 9.9E-12 3.4E-16 120.3 18.4 172 268-466 39-230 (388)
205 2qc5_A Streptogramin B lactona 99.4 1.1E-09 3.8E-14 102.8 30.7 229 206-479 28-258 (300)
206 1xip_A Nucleoporin NUP159; bet 99.4 7.6E-11 2.6E-15 114.1 22.2 175 206-423 46-231 (388)
207 3c75_H MADH, methylamine dehyd 99.4 1.6E-10 5.4E-15 113.4 24.7 293 149-488 82-409 (426)
208 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 4.9E-10 1.7E-14 106.2 26.4 243 141-436 19-299 (314)
209 1yr2_A Prolyl oligopeptidase; 99.3 2.4E-10 8.1E-15 122.1 26.7 249 140-438 163-443 (741)
210 3iuj_A Prolyl endopeptidase; h 99.3 1.6E-10 5.4E-15 122.4 23.1 236 206-483 137-407 (693)
211 2ghs_A AGR_C_1268P; regucalcin 99.3 2.1E-09 7.3E-14 102.7 27.7 223 206-472 57-294 (326)
212 3iuj_A Prolyl endopeptidase; h 99.3 1.1E-09 3.8E-14 115.9 27.1 253 138-440 127-409 (693)
213 2qe8_A Uncharacterized protein 99.3 3.9E-10 1.3E-14 108.7 20.2 282 141-477 18-317 (343)
214 3hrp_A Uncharacterized protein 99.2 4.5E-09 1.5E-13 103.7 27.3 239 140-434 131-408 (409)
215 2mad_H Methylamine dehydrogena 99.2 1.5E-08 5.2E-13 98.5 30.2 241 144-439 70-353 (373)
216 3sjl_D Methylamine dehydrogena 99.2 4E-09 1.4E-13 101.6 25.1 259 144-460 82-384 (386)
217 3g4e_A Regucalcin; six bladed 99.2 4.1E-09 1.4E-13 99.3 24.7 209 265-489 11-237 (297)
218 1mda_H Methylamine dehydrogena 99.2 7.4E-10 2.5E-14 106.9 18.2 267 167-490 47-355 (368)
219 1npe_A Nidogen, entactin; glyc 99.1 7E-08 2.4E-12 89.2 27.3 207 267-489 36-246 (267)
220 3dr2_A Exported gluconolactona 99.1 1.7E-08 5.7E-13 95.4 22.7 223 206-478 53-303 (305)
221 3c75_H MADH, methylamine dehyd 99.1 2.8E-08 9.7E-13 97.4 24.3 242 144-439 122-405 (426)
222 2ghs_A AGR_C_1268P; regucalcin 99.1 3.6E-08 1.2E-12 94.1 24.3 198 269-487 51-265 (326)
223 3dr2_A Exported gluconolactona 99.0 2.7E-08 9.2E-13 94.0 21.9 225 141-427 46-298 (305)
224 2ece_A 462AA long hypothetical 99.0 2E-07 6.9E-12 90.5 27.2 234 207-468 93-399 (462)
225 2hz6_A Endoplasmic reticulum t 99.0 5.2E-11 1.8E-15 116.0 1.1 185 279-487 9-198 (369)
226 1yiq_A Quinohemoprotein alcoho 99.0 3.3E-08 1.1E-12 104.1 21.5 243 208-489 120-513 (689)
227 2hz6_A Endoplasmic reticulum t 99.0 2.1E-10 7.1E-15 111.7 4.4 203 208-461 8-215 (369)
228 1kb0_A Quinohemoprotein alcoho 99.0 8.6E-08 2.9E-12 100.7 24.1 244 208-491 127-517 (677)
229 1fwx_A Nitrous oxide reductase 99.0 1.6E-08 5.6E-13 101.5 17.5 247 207-483 99-433 (595)
230 1npe_A Nidogen, entactin; glyc 98.9 1.4E-06 4.8E-11 80.3 28.2 216 206-462 44-263 (267)
231 1mda_H Methylamine dehydrogena 98.9 3.9E-08 1.3E-12 94.8 16.9 251 144-459 69-366 (368)
232 1ijq_A LDL receptor, low-densi 98.9 4E-06 1.4E-10 79.4 30.2 211 267-489 30-246 (316)
233 3q7m_A Lipoprotein YFGL, BAMB; 98.9 1E-06 3.5E-11 85.7 26.6 223 209-478 143-375 (376)
234 1fwx_A Nitrous oxide reductase 98.9 7.3E-08 2.5E-12 96.8 18.4 255 212-481 18-361 (595)
235 3q7m_A Lipoprotein YFGL, BAMB; 98.9 2.2E-06 7.5E-11 83.3 28.1 228 208-488 102-344 (376)
236 1yiq_A Quinohemoprotein alcoho 98.8 7.1E-07 2.4E-11 94.0 25.8 185 269-468 237-536 (689)
237 3hxj_A Pyrrolo-quinoline quino 98.8 2.3E-07 7.9E-12 88.2 19.9 219 209-482 107-325 (330)
238 1kb0_A Quinohemoprotein alcoho 98.8 1E-06 3.4E-11 92.6 26.3 199 268-481 244-567 (677)
239 2iwa_A Glutamine cyclotransfer 98.8 7.4E-07 2.5E-11 81.3 21.2 198 268-483 22-239 (266)
240 3v65_B Low-density lipoprotein 98.8 4.1E-06 1.4E-10 81.7 28.0 210 267-489 116-326 (386)
241 2ece_A 462AA long hypothetical 98.8 1.4E-07 4.9E-12 91.5 16.8 199 270-481 85-352 (462)
242 2qe8_A Uncharacterized protein 98.8 1.2E-07 4.1E-12 91.2 15.4 212 267-483 17-280 (343)
243 3p5b_L Low density lipoprotein 98.8 1.4E-05 4.7E-10 78.3 30.1 213 266-489 111-328 (400)
244 3hxj_A Pyrrolo-quinoline quino 98.7 3.6E-07 1.2E-11 86.9 18.1 180 281-486 109-288 (330)
245 3v64_C Agrin; beta propeller, 98.7 1.4E-05 4.9E-10 76.6 28.7 208 267-488 73-282 (349)
246 2fp8_A Strictosidine synthase; 98.7 5.9E-06 2E-10 78.4 25.5 258 193-481 21-313 (322)
247 2p4o_A Hypothetical protein; p 98.7 1.2E-05 4E-10 75.8 26.4 232 189-469 30-277 (306)
248 2iwa_A Glutamine cyclotransfer 98.7 4.1E-06 1.4E-10 76.3 20.9 198 191-437 21-238 (266)
249 1kv9_A Type II quinohemoprotei 98.6 1.7E-06 5.8E-11 90.8 19.5 243 208-490 116-497 (668)
250 3m0c_C LDL receptor, low-densi 98.6 5.4E-05 1.8E-09 80.3 30.0 212 266-488 423-639 (791)
251 4a2l_A BT_4663, two-component 98.6 0.00015 5.1E-09 77.8 34.3 197 266-483 262-482 (795)
252 3qqz_A Putative uncharacterize 98.6 9.8E-05 3.4E-09 66.8 27.6 204 264-479 24-251 (255)
253 3sov_A LRP-6, low-density lipo 98.5 7.5E-05 2.6E-09 70.5 27.4 209 267-489 35-246 (318)
254 3nok_A Glutaminyl cyclase; bet 98.5 9.1E-06 3.1E-10 73.2 19.7 180 268-468 56-253 (268)
255 3nol_A Glutamine cyclotransfer 98.5 1.5E-05 5.3E-10 71.7 21.1 181 268-468 44-243 (262)
256 1k3i_A Galactose oxidase precu 98.5 5E-06 1.7E-10 87.2 20.6 277 144-470 190-530 (656)
257 3v64_C Agrin; beta propeller, 98.5 0.00019 6.4E-09 68.8 29.3 241 141-438 35-277 (349)
258 4a2l_A BT_4663, two-component 98.5 0.00015 5.1E-09 77.8 31.1 279 142-484 133-439 (795)
259 3mbr_X Glutamine cyclotransfer 98.5 4.6E-05 1.6E-09 68.0 22.2 183 267-468 21-222 (243)
260 1n7d_A LDL receptor, low-densi 98.5 1.3E-06 4.5E-11 91.9 13.8 210 267-488 406-621 (699)
261 3v65_B Low-density lipoprotein 98.4 0.00013 4.6E-09 70.9 26.9 202 192-438 117-320 (386)
262 2ad6_A Methanol dehydrogenase 98.4 6.9E-05 2.3E-09 76.9 25.0 242 208-489 114-502 (571)
263 2xe4_A Oligopeptidase B; hydro 98.4 0.0002 6.9E-09 76.2 29.3 254 141-442 175-464 (751)
264 2fp8_A Strictosidine synthase; 98.4 6.7E-05 2.3E-09 71.0 23.2 242 141-438 20-315 (322)
265 1w6s_A Methanol dehydrogenase 98.4 0.00012 4E-09 75.3 25.0 59 426-488 452-510 (599)
266 1kv9_A Type II quinohemoprotei 98.3 6.9E-05 2.4E-09 78.5 23.0 161 267-440 230-492 (668)
267 2xe4_A Oligopeptidase B; hydro 98.3 4.7E-05 1.6E-09 81.1 21.7 234 205-483 181-460 (751)
268 1ijq_A LDL receptor, low-densi 98.3 0.00033 1.1E-08 66.1 25.3 181 289-481 10-195 (316)
269 1flg_A Protein (quinoprotein e 98.3 0.00039 1.3E-08 71.4 26.7 60 426-489 465-524 (582)
270 3v9f_A Two-component system se 98.3 0.00084 2.9E-08 71.8 30.3 198 266-483 362-570 (781)
271 2p4o_A Hypothetical protein; p 98.3 0.00032 1.1E-08 65.8 24.0 228 141-424 33-277 (306)
272 3nok_A Glutaminyl cyclase; bet 98.2 3.9E-05 1.3E-09 69.1 16.1 168 300-489 44-218 (268)
273 1k3i_A Galactose oxidase precu 98.2 2E-05 6.7E-10 82.7 16.4 202 269-483 245-499 (656)
274 3nol_A Glutamine cyclotransfer 98.2 2.3E-05 7.8E-10 70.6 14.1 172 300-490 32-210 (262)
275 3v9f_A Two-component system se 98.2 0.0043 1.5E-07 66.3 34.6 203 267-482 163-393 (781)
276 4a0p_A LRP6, LRP-6, low-densit 98.2 0.0018 6.3E-08 67.0 30.3 206 267-487 37-243 (628)
277 3tc9_A Hypothetical hydrolase; 98.2 0.00025 8.6E-09 70.0 22.5 205 266-480 178-429 (430)
278 3mbr_X Glutamine cyclotransfer 98.2 0.00036 1.2E-08 62.2 20.8 184 190-424 20-223 (243)
279 3p5b_L Low density lipoprotein 98.1 0.0059 2E-07 59.5 30.4 210 191-439 112-323 (400)
280 2ad6_A Methanol dehydrogenase 98.1 0.0012 4.1E-08 67.6 26.5 138 290-440 273-498 (571)
281 3sov_A LRP-6, low-density lipo 98.1 0.0027 9.4E-08 59.7 26.3 203 193-439 37-241 (318)
282 4hw6_A Hypothetical protein, I 98.1 0.00095 3.2E-08 65.9 23.8 205 266-480 181-432 (433)
283 3amr_A 3-phytase; beta-propell 98.1 0.0009 3.1E-08 62.9 21.7 195 279-480 40-262 (355)
284 1flg_A Protein (quinoprotein e 98.0 0.0033 1.1E-07 64.5 27.8 163 289-466 291-545 (582)
285 4hw6_A Hypothetical protein, I 98.0 0.0014 4.7E-08 64.7 23.0 200 267-479 139-372 (433)
286 3s94_A LRP-6, low-density lipo 97.9 0.0025 8.5E-08 65.9 25.0 208 267-487 40-249 (619)
287 3tc9_A Hypothetical hydrolase; 97.9 0.0014 4.9E-08 64.5 22.3 157 267-436 137-301 (430)
288 3kya_A Putative phosphatase; s 97.9 0.0025 8.5E-08 63.3 23.6 212 267-487 186-481 (496)
289 3qqz_A Putative uncharacterize 97.9 0.0047 1.6E-07 55.7 23.3 203 140-382 27-251 (255)
290 3m0c_C LDL receptor, low-densi 97.9 0.0038 1.3E-07 66.2 25.7 161 267-438 471-634 (791)
291 1n7d_A LDL receptor, low-densi 97.8 0.00016 5.4E-09 76.1 14.3 162 268-438 454-616 (699)
292 3kya_A Putative phosphatase; s 97.8 0.0058 2E-07 60.7 23.4 218 268-490 140-417 (496)
293 2p9w_A MAL S 1 allergenic prot 97.8 0.0059 2E-07 56.8 21.5 203 268-481 14-265 (334)
294 2ism_A Putative oxidoreductase 97.7 0.015 5.2E-07 55.4 25.0 240 192-468 32-332 (352)
295 2xbg_A YCF48-like protein; pho 97.7 0.041 1.4E-06 51.8 27.9 195 267-479 122-320 (327)
296 2xzh_A Clathrin heavy chain 1; 97.7 0.035 1.2E-06 51.3 24.5 198 273-487 73-296 (365)
297 3ei3_A DNA damage-binding prot 97.6 0.052 1.8E-06 60.1 30.5 291 139-486 553-918 (1158)
298 1w6s_A Methanol dehydrogenase 97.6 0.0038 1.3E-07 64.1 19.9 192 281-487 64-348 (599)
299 3s94_A LRP-6, low-density lipo 97.6 0.045 1.5E-06 56.4 27.8 203 267-482 349-552 (619)
300 4a0p_A LRP6, LRP-6, low-densit 97.6 0.039 1.3E-06 57.0 26.8 207 267-486 340-554 (628)
301 1bpo_A Protein (clathrin); cla 97.5 0.058 2E-06 51.8 24.5 200 271-487 70-295 (494)
302 3amr_A 3-phytase; beta-propell 97.5 0.026 8.9E-07 53.0 21.9 146 288-439 98-267 (355)
303 2xzh_A Clathrin heavy chain 1; 97.4 0.09 3.1E-06 48.6 28.0 245 206-488 75-339 (365)
304 2g8s_A Glucose/sorbosone dehyd 97.3 0.12 4E-06 49.2 28.9 243 193-467 20-339 (353)
305 2vpj_A Kelch-like protein 12; 97.3 0.014 4.6E-07 54.2 17.9 185 279-483 63-280 (301)
306 2p9w_A MAL S 1 allergenic prot 97.3 0.013 4.6E-07 54.5 17.0 163 307-481 10-215 (334)
307 2vpj_A Kelch-like protein 12; 97.3 0.025 8.5E-07 52.4 19.4 147 279-441 113-283 (301)
308 1bpo_A Protein (clathrin); cla 97.2 0.16 5.6E-06 48.8 29.1 244 206-487 74-337 (494)
309 3ii7_A Kelch-like protein 7; p 97.2 0.035 1.2E-06 51.5 19.5 186 279-483 56-274 (306)
310 3ei3_A DNA damage-binding prot 97.2 0.43 1.5E-05 52.8 31.6 191 186-416 549-748 (1158)
311 2xbg_A YCF48-like protein; pho 97.2 0.16 5.5E-06 47.6 25.3 151 265-434 161-320 (327)
312 2xn4_A Kelch-like protein 2; s 97.1 0.024 8.1E-07 52.6 17.5 186 279-483 62-278 (302)
313 1zgk_A Kelch-like ECH-associat 97.1 0.018 6.1E-07 53.7 16.4 186 279-483 71-289 (308)
314 3ii7_A Kelch-like protein 7; p 97.0 0.055 1.9E-06 50.2 19.3 150 279-444 102-280 (306)
315 3a9g_A Putative uncharacterize 97.0 0.25 8.6E-06 46.9 25.2 241 192-469 30-330 (354)
316 3sre_A PON1, serum paraoxonase 97.0 0.16 5.4E-06 48.2 21.6 183 267-462 112-326 (355)
317 1xi4_A Clathrin heavy chain; a 96.9 0.26 8.8E-06 54.6 25.2 243 206-486 74-336 (1630)
318 3sre_A PON1, serum paraoxonase 96.8 0.27 9.3E-06 46.5 21.4 187 268-471 51-287 (355)
319 4asc_A Kelch repeat and BTB do 96.6 0.15 5.2E-06 47.4 18.7 186 279-483 46-279 (315)
320 1zgk_A Kelch-like ECH-associat 96.6 0.25 8.4E-06 45.8 20.0 148 279-442 122-293 (308)
321 2xn4_A Kelch-like protein 2; s 96.4 0.52 1.8E-05 43.3 20.6 145 279-439 109-279 (302)
322 3das_A Putative oxidoreductase 96.3 0.76 2.6E-05 43.2 25.7 242 206-472 40-330 (347)
323 1tl2_A L10, protein (tachylect 96.2 0.16 5.6E-06 44.1 14.4 185 279-481 4-208 (236)
324 2ism_A Putative oxidoreductase 96.2 0.34 1.2E-05 45.9 18.5 64 354-423 269-332 (352)
325 1xi4_A Clathrin heavy chain; a 96.1 0.45 1.5E-05 52.8 20.3 197 273-486 72-294 (1630)
326 3pbp_A Nucleoporin NUP82; beta 96.0 0.78 2.7E-05 44.1 19.3 141 288-431 40-207 (452)
327 2uvk_A YJHT; unknown function, 96.0 0.29 9.8E-06 46.4 16.9 57 428-487 286-348 (357)
328 3pbp_A Nucleoporin NUP82; beta 95.9 1.4 4.6E-05 42.5 21.2 142 331-476 40-207 (452)
329 2woz_A Kelch repeat and BTB do 95.7 0.51 1.8E-05 43.8 17.2 185 279-483 57-289 (318)
330 4asc_A Kelch repeat and BTB do 95.6 1.4 4.8E-05 40.6 21.1 148 279-442 99-283 (315)
331 3ott_A Two-component system se 95.5 3 0.0001 43.9 24.6 190 267-483 63-262 (758)
332 3ott_A Two-component system se 95.4 3.2 0.00011 43.7 30.7 186 268-477 104-303 (758)
333 2uvk_A YJHT; unknown function, 95.1 0.89 3E-05 42.9 17.1 61 376-446 286-352 (357)
334 2zwa_A Leucine carboxyl methyl 94.7 0.51 1.8E-05 49.3 15.1 194 279-483 398-637 (695)
335 2be1_A Serine/threonine-protei 94.2 0.095 3.3E-06 49.2 7.3 194 280-486 11-236 (339)
336 3s25_A Hypothetical 7-bladed b 93.9 3.8 0.00013 37.7 20.8 174 273-478 110-290 (302)
337 3sbq_A Nitrous-oxide reductase 93.9 5.8 0.0002 39.6 22.7 261 212-482 73-409 (638)
338 1cru_A Protein (soluble quinop 93.9 4.1 0.00014 39.9 18.7 110 310-424 27-162 (454)
339 1cru_A Protein (soluble quinop 93.9 5.3 0.00018 39.1 30.3 58 418-475 370-430 (454)
340 2woz_A Kelch repeat and BTB do 93.8 1.5 5.2E-05 40.5 14.8 184 281-483 18-233 (318)
341 2be1_A Serine/threonine-protei 93.7 4.6 0.00016 37.7 18.8 103 280-385 112-232 (339)
342 1tl2_A L10, protein (tachylect 93.7 1.1 3.8E-05 38.9 12.2 102 268-379 42-158 (236)
343 2zwa_A Leucine carboxyl methyl 93.2 3.1 0.00011 43.4 17.5 65 279-343 501-579 (695)
344 3a9g_A Putative uncharacterize 92.8 6.4 0.00022 37.0 21.1 209 267-482 29-297 (354)
345 3b7f_A Glycosyl hydrolase, BNR 92.4 7.8 0.00027 36.9 19.6 188 280-476 23-257 (394)
346 3b7f_A Glycosyl hydrolase, BNR 92.3 7.9 0.00027 36.8 24.2 189 267-468 55-296 (394)
347 2g8s_A Glucose/sorbosone dehyd 92.0 8.1 0.00028 36.3 20.2 60 353-422 271-339 (353)
348 3das_A Putative oxidoreductase 90.7 11 0.00037 35.3 17.4 153 308-466 30-217 (347)
349 3s25_A Hypothetical 7-bladed b 89.7 11 0.00037 34.5 15.3 176 276-481 23-216 (302)
350 1sqj_A OXG-RCBH, oligoxylogluc 89.4 24 0.00082 37.3 21.6 150 266-426 14-190 (789)
351 3qhy_B Beta-lactamase inhibito 88.0 15 0.00051 33.2 21.4 185 268-483 64-248 (282)
352 3sbq_A Nitrous-oxide reductase 87.3 6 0.00021 39.4 12.0 103 333-436 299-408 (638)
353 2cn3_A Xyloglucanase, beta-1,4 86.2 35 0.0012 35.6 22.6 106 268-374 24-153 (737)
354 2ca6_A RAN GTPase-activating p 84.9 0.31 1.1E-05 46.7 1.8 15 26-40 323-337 (386)
355 2wg3_C Hedgehog-interacting pr 84.6 31 0.0011 33.6 29.7 74 395-469 265-354 (463)
356 3q6k_A 43.2 kDa salivary prote 84.5 28 0.00095 33.0 22.6 170 290-469 124-342 (381)
357 4hvt_A Ritya.17583.B, post-pro 82.4 50 0.0017 34.3 21.4 185 289-480 216-429 (711)
358 1sqj_A OXG-RCBH, oligoxylogluc 82.0 26 0.0009 36.9 15.3 154 309-471 14-190 (789)
359 2wg3_C Hedgehog-interacting pr 80.1 46 0.0016 32.4 15.5 113 353-472 14-160 (463)
360 4gq2_M Nucleoporin NUP120; bet 79.8 18 0.00063 39.0 13.4 39 267-306 236-274 (950)
361 2zux_A YESW protein; beta-prop 77.3 61 0.0021 32.3 23.8 180 264-462 176-426 (591)
362 3a0f_A Xyloglucanase; beta-pro 73.5 93 0.0032 32.5 17.0 139 280-431 457-613 (763)
363 2cn3_A Xyloglucanase, beta-1,4 71.6 68 0.0023 33.4 14.8 109 310-426 23-153 (737)
364 4b1v_M Phosphatase and actin r 67.3 1.7 5.7E-05 23.6 0.6 12 7-18 21-32 (32)
365 3a0f_A Xyloglucanase; beta-pro 65.5 1.4E+02 0.0046 31.3 23.9 156 264-427 18-203 (763)
366 4fhn_B Nucleoporin NUP120; pro 64.4 12 0.00042 41.3 7.6 39 267-306 238-276 (1139)
367 3no0_A DNA gyrase subunit A; D 60.9 92 0.0031 27.8 21.3 209 267-483 24-248 (276)
368 4gq2_M Nucleoporin NUP120; bet 59.9 1.9E+02 0.0065 31.1 19.4 33 406-439 237-269 (950)
369 3l6v_A GYRA, DNA gyrase subuni 58.8 1.2E+02 0.0041 28.4 23.6 117 267-385 99-266 (370)
370 1suu_A DNA gyrase subunit A; t 52.5 1.4E+02 0.0047 27.2 25.7 206 207-436 6-231 (312)
371 2zuy_A YESX protein; beta-prop 50.0 2.1E+02 0.0072 28.7 22.4 184 264-463 180-431 (620)
372 2m0n_A Putative uncharacterize 47.6 15 0.00051 27.6 3.1 33 4-37 13-55 (112)
373 3f7f_A Nucleoporin NUP120; nuc 47.1 27 0.00091 36.1 6.0 38 267-307 222-259 (729)
374 4fp9_B Mterf domain-containing 44.2 5.6 0.00019 37.0 0.5 9 10-18 225-233 (335)
375 4fhn_B Nucleoporin NUP120; pro 43.0 45 0.0015 36.9 7.5 33 406-439 239-271 (1139)
376 3uc1_A DNA gyrase subunit A; D 41.7 2.1E+02 0.0071 26.2 21.5 166 267-436 95-279 (327)
377 1zi0_A DNA gyrase subunit A; b 40.4 2.1E+02 0.0071 25.8 23.9 166 267-436 95-277 (307)
378 3f7f_A Nucleoporin NUP120; nuc 40.3 1.1E+02 0.0038 31.5 9.3 38 405-445 222-259 (729)
379 3zwu_A Alkaline phosphatase PH 38.0 1.1E+02 0.0036 31.0 8.7 59 407-467 478-548 (592)
380 2lky_A Uncharacterized protein 36.4 6.9 0.00024 29.4 -0.2 32 4-36 13-54 (112)
381 3qhy_B Beta-lactamase inhibito 35.4 2.4E+02 0.0081 25.0 24.3 164 267-461 102-265 (282)
382 1suu_A DNA gyrase subunit A; t 35.3 2.5E+02 0.0087 25.3 22.3 196 279-482 8-232 (312)
383 2kvc_A Putative uncharacterize 35.2 7.1 0.00024 28.9 -0.3 33 3-36 10-52 (103)
384 3ol3_A Putative uncharacterize 32.3 7.8 0.00027 28.9 -0.5 33 3-36 15-57 (107)
385 3l6v_A GYRA, DNA gyrase subuni 32.0 3.2E+02 0.011 25.5 27.3 251 207-481 5-316 (370)
386 3q6k_A 43.2 kDa salivary prote 29.6 3.6E+02 0.012 25.3 21.6 117 267-384 152-306 (381)
387 3kci_A Probable E3 ubiquitin-p 27.8 3.7E+02 0.013 24.9 21.9 255 145-432 56-341 (389)
388 4a9v_A PHOX; hydrolase, beta-p 27.7 2.2E+02 0.0077 28.5 8.8 65 406-472 477-553 (592)
389 1wp5_A Topoisomerase IV; broke 26.7 3.6E+02 0.012 24.5 24.8 246 207-481 3-277 (323)
390 4hvt_A Ritya.17583.B, post-pro 24.1 6E+02 0.021 26.1 28.9 98 330-438 318-431 (711)
391 3no0_A DNA gyrase subunit A; D 23.8 3.8E+02 0.013 23.6 18.7 163 266-436 67-246 (276)
392 3nzj_F Proteasome component C1 22.7 31 0.0011 31.2 1.6 34 5-42 216-249 (288)
393 4ftd_A Uncharacterized protein 20.3 5.8E+02 0.02 24.5 15.9 216 266-489 135-385 (453)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.5e-44 Score=349.62 Aligned_cols=301 Identities=20% Similarity=0.243 Sum_probs=239.0
Q ss_pred CccccccccccCCCceEEEEEecCCcc--eeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEe
Q 010748 138 DSEDLEDMTINPNDAVIVCARNEDDVS--HLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~~~~--~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g 215 (502)
+...|.++.|+|+|++|++++ ++... ...++.|.........-.............+++| +|+ +.|++|
T Consensus 29 ~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------s~d-~~l~~~ 99 (344)
T 4gqb_B 29 MERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTW-------VGE-RGILVA 99 (344)
T ss_dssp CCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEE-------ETT-TEEEEE
T ss_pred ccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEE-------eCC-CeEEEE
Confidence 566799999999999999887 33221 1244455432221101000011111223467777 566 478899
Q ss_pred cCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEe
Q 010748 216 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWD 295 (502)
Q Consensus 216 ~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd 295 (502)
+.||.|+|||+.+++.... ....+.+|...|++|+|+|+ +.+|++|+.|++|++||
T Consensus 100 s~dg~v~lWd~~~~~~~~~-----------------------~~~~~~~H~~~V~~v~~spd-g~~l~sgs~d~~i~iwd 155 (344)
T 4gqb_B 100 SDSGAVELWELDENETLIV-----------------------SKFCKYEHDDIVSTVSVLSS-GTQAVSGSKDICIKVWD 155 (344)
T ss_dssp ETTSEEEEEEECTTSSCEE-----------------------EEEEEECCSSCEEEEEECTT-SSEEEEEETTSCEEEEE
T ss_pred ECCCEEEEEeccCCCceeE-----------------------eeccccCCCCCEEEEEECCC-CCEEEEEeCCCeEEEEE
Confidence 9999999999986543321 12234589999999999999 56999999999999999
Q ss_pred CCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccce--EeecCCeeEEEeCCCCCCEEEEEeC
Q 010748 296 VAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK--WAVAADVESLAWDPHAEHSFVVSLE 373 (502)
Q Consensus 296 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~--~~~~~~v~~v~~~~~~~~~~~~~~~ 373 (502)
+.+++++.++.+|...|++++|+|++..+|++++.|++|++||+++++..... ..+...+.+++|+|.+..++++|+.
T Consensus 156 ~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~ 235 (344)
T 4gqb_B 156 LAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDE 235 (344)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEET
T ss_pred CCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEecc
Confidence 99999999999999999999999998778999999999999999988765533 2345578999999988889999999
Q ss_pred CCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCcEE
Q 010748 374 DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVF 453 (502)
Q Consensus 374 dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~ 453 (502)
||.|++||+++. .++..+.+|...|++++|+|++..+|++|+.|++|+|||+.+++ +..+.+|.+.|+
T Consensus 236 dg~v~~wd~~~~---------~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~---~~~~~~H~~~V~ 303 (344)
T 4gqb_B 236 NGTVSLVDTKST---------SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE---LFRSQAHRDFVR 303 (344)
T ss_dssp TSEEEEEESCC-----------CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE---EEEECCCSSCEE
T ss_pred CCcEEEEECCCC---------cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc---EEEEcCCCCCEE
Confidence 999999999986 77889999999999999999986789999999999999999876 445688999999
Q ss_pred EEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010748 454 SVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 454 ~~~~spd~~~ll~sg~~dg~i~vwd~~~~~ 483 (502)
+++|+|+++++|++||.||+|++|++.+..
T Consensus 304 ~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 304 DATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred EEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 999999998889999999999999997754
No 2
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=6.2e-43 Score=342.16 Aligned_cols=304 Identities=20% Similarity=0.244 Sum_probs=234.8
Q ss_pred CCccccccccccCCCceEEEEEecCCc-ceeEEEEEecCCCCCCC----eeeeeccccCCCcceeeeecCCCCCCCCCCE
Q 010748 137 EDSEDLEDMTINPNDAVIVCARNEDDV-SHLEVYILEESDGGDPN----LYVHHHIIIPAFPLCMAWLDCPLKDREKGNF 211 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~-~~l~v~~~~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 211 (502)
.|+..|.+++|+|+|++||+|+.+... --..|++|+........ ....|. ....+++| +|++.+
T Consensus 40 ~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~----~~V~~~~~-------s~d~~~ 108 (357)
T 4g56_B 40 CMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTE----AGVTDVAW-------VSEKGI 108 (357)
T ss_dssp CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECS----SCEEEEEE-------ETTTEE
T ss_pred cccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCC----CCEEEEEE-------cCCCCE
Confidence 488999999999999999999864310 01256777654431111 112222 22367877 577755
Q ss_pred EEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcE
Q 010748 212 MAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQV 291 (502)
Q Consensus 212 la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v 291 (502)
++++.||.|+|||+.+.+... .......+|...|++|+|+|+ +.+|++|+.|++|
T Consensus 109 -l~~s~dg~v~lWd~~~~~~~~-----------------------~~~~~~~~h~~~V~~v~~spd-g~~l~sgs~dg~v 163 (357)
T 4g56_B 109 -LVASDSGAVELWEILEKESLL-----------------------VNKFAKYEHDDIVKTLSVFSD-GTQAVSGGKDFSV 163 (357)
T ss_dssp -EEEETTSCEEEC--------C-----------------------CCCEEECCCSSCEEEEEECSS-SSEEEEEETTSCE
T ss_pred -EEEECCCEEEEeeccccceeE-----------------------EEeeccCCCCCCEEEEEECCC-CCEEEEEeCCCeE
Confidence 556789999999997644322 112233479999999999999 5699999999999
Q ss_pred EEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceE--eecCCeeEEEeCCCCCCEEE
Q 010748 292 KIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW--AVAADVESLAWDPHAEHSFV 369 (502)
Q Consensus 292 ~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~~v~~v~~~~~~~~~~~ 369 (502)
++||+.+++++..+.+|...|++++|++++..++++++.||+|++||+++++...... .+...+.+++|+|++..+++
T Consensus 164 ~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la 243 (357)
T 4g56_B 164 KVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFA 243 (357)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEE
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEE
Confidence 9999999999999999999999999999987789999999999999999887654332 35667999999999888999
Q ss_pred EEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCC
Q 010748 370 VSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKA 449 (502)
Q Consensus 370 ~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~ 449 (502)
+|+.|+.|++||++++ .++..+.+|...|++++|+|++..+|++|+.|++|+|||+.+++ +....+|.
T Consensus 244 ~g~~d~~i~~wd~~~~---------~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~---~~~~~~H~ 311 (357)
T 4g56_B 244 CGDETGNVSLVNIKNP---------DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE---VFRDLSHR 311 (357)
T ss_dssp EEESSSCEEEEESSCG---------GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE---EEEECCCS
T ss_pred EeecccceeEEECCCC---------cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc---EeEECCCC
Confidence 9999999999999986 77889999999999999999987899999999999999999886 23445799
Q ss_pred CcEEEEEEcC-CCCcEEEEEeCCCcEEEEECCCCccccccc
Q 010748 450 GAVFSVAFSE-DSPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 450 ~~v~~~~~sp-d~~~ll~sg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
+.|++++|+| ++. +|++|+.||+|++|++.+.......+
T Consensus 312 ~~V~~vafsP~d~~-~l~s~s~Dg~v~iW~~~~~~~~~~~i 351 (357)
T 4g56_B 312 DFVTGVAWSPLDHS-KFTTVGWDHKVLHHHLPSEGRTENLI 351 (357)
T ss_dssp SCEEEEEECSSSTT-EEEEEETTSCEEEEECC---------
T ss_pred CCEEEEEEeCCCCC-EEEEEcCCCeEEEEECCCCCcccccc
Confidence 9999999999 566 69999999999999997765554443
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.4e-42 Score=344.59 Aligned_cols=287 Identities=22% Similarity=0.365 Sum_probs=247.0
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEe
Q 010748 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g 215 (502)
..|...|.++.|+|++++|++|+.++ .++||.+..... ...+..|.. ...+++| +|++++|++|
T Consensus 105 ~gh~~~V~~~~~~p~~~~l~s~s~Dg---~i~vwd~~~~~~--~~~l~~h~~----~V~~v~~-------~~~~~~l~sg 168 (410)
T 1vyh_C 105 SGHRSPVTRVIFHPVFSVMVSASEDA---TIKVWDYETGDF--ERTLKGHTD----SVQDISF-------DHSGKLLASC 168 (410)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEESSS---CEEEEETTTCCC--CEEECCCSS----CEEEEEE-------CTTSSEEEEE
T ss_pred cccCCcEEEEEEcCCCCEEEEEeCCC---eEEEEECCCCcE--EEEEeccCC----cEEEEEE-------cCCCCEEEEE
Confidence 35889999999999999999999887 567776654432 122222322 2367777 7899999999
Q ss_pred cCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEe
Q 010748 216 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWD 295 (502)
Q Consensus 216 ~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd 295 (502)
+.|++|+|||+.+... ...+.+|...|.+++|+|+ +.+|++|+.|++|++||
T Consensus 169 s~D~~i~iwd~~~~~~---------------------------~~~~~~h~~~V~~v~~~p~-~~~l~s~s~D~~i~~wd 220 (410)
T 1vyh_C 169 SADMTIKLWDFQGFEC---------------------------IRTMHGHDHNVSSVSIMPN-GDHIVSASRDKTIKMWE 220 (410)
T ss_dssp ETTSCCCEEETTSSCE---------------------------EECCCCCSSCEEEEEECSS-SSEEEEEETTSEEEEEE
T ss_pred eCCCeEEEEeCCCCce---------------------------eEEEcCCCCCEEEEEEeCC-CCEEEEEeCCCeEEEEE
Confidence 9999999999975332 2245589999999999999 56999999999999999
Q ss_pred CCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCC-----------
Q 010748 296 VAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHA----------- 364 (502)
Q Consensus 296 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~----------- 364 (502)
+.+++++.++.+|...|.++.|+|++ .+|++|+.|++|++||+++.........|...|.+++|+|++
T Consensus 221 ~~~~~~~~~~~~h~~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~ 299 (410)
T 1vyh_C 221 VQTGYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGS 299 (410)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSC
T ss_pred CCCCcEEEEEeCCCccEEEEEECCCC-CEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccc
Confidence 99999999999999999999999999 899999999999999999988777667888999999999963
Q ss_pred --------CCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCC
Q 010748 365 --------EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN 436 (502)
Q Consensus 365 --------~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~ 436 (502)
..++++|+.||.|++||++++ .++..+.+|...|++++|+|++ .+|++|+.||.|++||+.+
T Consensus 300 ~~~~~~~~g~~l~sgs~D~~i~iwd~~~~---------~~~~~~~~h~~~v~~v~~~~~g-~~l~s~s~D~~i~vwd~~~ 369 (410)
T 1vyh_C 300 ETKKSGKPGPFLLSGSRDKTIKMWDVSTG---------MCLMTLVGHDNWVRGVLFHSGG-KFILSCADDKTLRVWDYKN 369 (410)
T ss_dssp C-------CCEEEEEETTSEEEEEETTTT---------EEEEEEECCSSCEEEEEECSSS-SCEEEEETTTEEEEECCTT
T ss_pred cccccCCCCCEEEEEeCCCeEEEEECCCC---------ceEEEEECCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCC
Confidence 348999999999999999986 7788899999999999999998 8999999999999999988
Q ss_pred CCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECC
Q 010748 437 NQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTL 480 (502)
Q Consensus 437 ~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~ 480 (502)
++ ++..+.+|...|++++|+|++++ |++|+.||+|+||+++
T Consensus 370 ~~--~~~~~~~h~~~v~~l~~~~~~~~-l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 370 KR--CMKTLNAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 410 (410)
T ss_dssp SC--CCEEEECCSSCEEEEEECSSSSC-EEEEETTSEEEEEC--
T ss_pred Cc--eEEEEcCCCCcEEEEEEcCCCCE-EEEEeCCCcEEEEeCC
Confidence 77 56677889999999999999995 9999999999999863
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.8e-41 Score=324.50 Aligned_cols=287 Identities=20% Similarity=0.317 Sum_probs=243.3
Q ss_pred CCCccccccccccCC----CceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCE
Q 010748 136 DEDSEDLEDMTINPN----DAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNF 211 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~----~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 211 (502)
..|.+.|.+++|+|+ +.+|++|+.++ .++||.+.............|... ..++.| ++++.+
T Consensus 29 ~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~---~v~vW~~~~~~~~~~~~l~gh~~~----v~~~~~-------~~~~~~ 94 (321)
T 3ow8_A 29 QAHDDAIWSVAWGTNKKENSETVVTGSLDD---LVKVWKWRDERLDLQWSLEGHQLG----VVSVDI-------SHTLPI 94 (321)
T ss_dssp TSSSSCEEEEEEC-------CEEEEEETTS---CEEEEEEETTEEEEEEEECCCSSC----EEEEEE-------CSSSSE
T ss_pred ccCCCcEEEEEEecCCCCCCCEEEEEcCCC---CEEEEECCCCCeeeeeeeccCCCC----EEEEEE-------CCCCCE
Confidence 458999999999985 56899999887 679998875432000011223222 256666 788999
Q ss_pred EEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcE
Q 010748 212 MAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQV 291 (502)
Q Consensus 212 la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v 291 (502)
+++|+.|+.|++||+.++..+ ..+..|...+.+++|+|+ +.+|++|+.+|.|
T Consensus 95 l~s~s~D~~i~lWd~~~~~~~---------------------------~~~~~~~~~~~~~~~spd-g~~l~~g~~dg~v 146 (321)
T 3ow8_A 95 AASSSLDAHIRLWDLENGKQI---------------------------KSIDAGPVDAWTLAFSPD-SQYLATGTHVGKV 146 (321)
T ss_dssp EEEEETTSEEEEEETTTTEEE---------------------------EEEECCTTCCCCEEECTT-SSEEEEECTTSEE
T ss_pred EEEEeCCCcEEEEECCCCCEE---------------------------EEEeCCCccEEEEEECCC-CCEEEEEcCCCcE
Confidence 999999999999999754322 233467788999999999 5699999999999
Q ss_pred EEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEEEEE
Q 010748 292 KIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVS 371 (502)
Q Consensus 292 ~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~ 371 (502)
++|++.+++....+..|...|.+++|+|++ ++|++|+.||.|++||+++++.......+...|.+++|+|++. ++++|
T Consensus 147 ~i~~~~~~~~~~~~~~~~~~v~~~~~spdg-~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~-~l~s~ 224 (321)
T 3ow8_A 147 NIFGVESGKKEYSLDTRGKFILSIAYSPDG-KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ-LLVTA 224 (321)
T ss_dssp EEEETTTCSEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSC-EEEEE
T ss_pred EEEEcCCCceeEEecCCCceEEEEEECCCC-CEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCC-EEEEE
Confidence 999999999999999999999999999999 8999999999999999998877666667888999999999865 89999
Q ss_pred eCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCc
Q 010748 372 LEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGA 451 (502)
Q Consensus 372 ~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~ 451 (502)
+.||.|++||+++. .....+.+|...|.+++|+|++ .+|++++.|++|++||+.+++ ++..+..|.+.
T Consensus 225 s~dg~i~iwd~~~~---------~~~~~~~~h~~~v~~~~~sp~~-~~l~s~s~D~~v~iwd~~~~~--~~~~~~~h~~~ 292 (321)
T 3ow8_A 225 SDDGYIKIYDVQHA---------NLAGTLSGHASWVLNVAFCPDD-THFVSSSSDKSVKVWDVGTRT--CVHTFFDHQDQ 292 (321)
T ss_dssp CTTSCEEEEETTTC---------CEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTE--EEEEECCCSSC
T ss_pred cCCCeEEEEECCCc---------ceeEEEcCCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCE--EEEEEcCCCCc
Confidence 99999999999976 6778889999999999999998 899999999999999999887 67788899999
Q ss_pred EEEEEEcCCCCcEEEEEeCCCcEEEEEC
Q 010748 452 VFSVAFSEDSPFVLAIGGSKGKLEIWDT 479 (502)
Q Consensus 452 v~~~~~spd~~~ll~sg~~dg~i~vwd~ 479 (502)
|.+++|+|++. .|++++.||.|+|||+
T Consensus 293 v~~v~~s~~g~-~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 293 VWGVKYNGNGS-KIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EEEEEECTTSS-EEEEEETTCCEEEEEC
T ss_pred EEEEEECCCCC-EEEEEeCCCeEEEEeC
Confidence 99999999999 5899999999999996
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.2e-40 Score=323.79 Aligned_cols=286 Identities=18% Similarity=0.315 Sum_probs=237.7
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010748 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~ 216 (502)
.|...|.++.|+|++++|++|+.++ .++||....... ......| .....+++| +|++++||+|+
T Consensus 53 gH~~~v~~~~~s~d~~~l~s~s~Dg---~v~iWd~~~~~~--~~~~~~~----~~~v~~~~~-------s~~~~~l~s~~ 116 (340)
T 1got_B 53 GHLAKIYAMHWGTDSRLLLSASQDG---KLIIWDSYTTNK--VHAIPLR----SSWVMTCAY-------APSGNYVACGG 116 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTT---EEEEEETTTCCE--EEEEECS----SSCEEEEEE-------CTTSSEEEEEE
T ss_pred CCCCceEEEEECCCCCEEEEEeCCC---cEEEEECCCCCc--ceEeecC----CccEEEEEE-------CCCCCEEEEEe
Confidence 5888999999999999999999887 445554332221 1111122 223456666 79999999999
Q ss_pred CCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeC
Q 010748 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV 296 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~ 296 (502)
.|+.|++|++.+.... ......+.+|...|.++.|+++ + .|++|+.|++|++||+
T Consensus 117 ~d~~v~iw~~~~~~~~-----------------------~~~~~~~~~h~~~v~~~~~~~~-~-~l~s~s~d~~i~~wd~ 171 (340)
T 1got_B 117 LDNICSIYNLKTREGN-----------------------VRVSRELAGHTGYLSCCRFLDD-N-QIVTSSGDTTCALWDI 171 (340)
T ss_dssp TTCEEEEEETTTCSBS-----------------------CEEEEEEECCSSCEEEEEEEET-T-EEEEEETTSCEEEEET
T ss_pred CCCeEEEEECccCCCc-----------------------ceeEEEecCCCccEEEEEECCC-C-cEEEEECCCcEEEEEC
Confidence 9999999999753211 1222345689999999999987 3 5899999999999999
Q ss_pred CCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEEEEEeCCCc
Q 010748 297 AAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGT 376 (502)
Q Consensus 297 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~ 376 (502)
.+++++..+.+|...|.+++|+|++ .+|++|+.|++|++||+++.........|...|.+++|+|++. ++++|+.||.
T Consensus 172 ~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~d~~ 249 (340)
T 1got_B 172 ETGQQTTTFTGHTGDVMSLSLAPDT-RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGN-AFATGSDDAT 249 (340)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSS-EEEEEETTSC
T ss_pred CCCcEEEEEcCCCCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCC-EEEEEcCCCc
Confidence 9999999999999999999999998 8999999999999999999887766667889999999999865 8999999999
Q ss_pred EEEEECCCCCCCCCCCCCccceEEe--ccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCcEEE
Q 010748 377 IKGFDIRTAKSDPDSTSQQSSFTLH--AHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFS 454 (502)
Q Consensus 377 v~i~d~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~ 454 (502)
|++||+++. ..+..+. .+...|++++|+|++ .+|++|+.|+.|++||+.+.+ .+..+.+|.++|.+
T Consensus 250 v~iwd~~~~---------~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~g~~d~~i~vwd~~~~~--~~~~~~~h~~~v~~ 317 (340)
T 1got_B 250 CRLFDLRAD---------QELMTYSHDNIICGITSVSFSKSG-RLLLAGYDDFNCNVWDALKAD--RAGVLAGHDNRVSC 317 (340)
T ss_dssp EEEEETTTT---------EEEEEECCTTCCSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEE
T ss_pred EEEEECCCC---------cEEEEEccCCcccceEEEEECCCC-CEEEEECCCCeEEEEEcccCc--EeeEeecCCCcEEE
Confidence 999999976 4444443 234579999999998 999999999999999999887 56677899999999
Q ss_pred EEEcCCCCcEEEEEeCCCcEEEEE
Q 010748 455 VAFSEDSPFVLAIGGSKGKLEIWD 478 (502)
Q Consensus 455 ~~~spd~~~ll~sg~~dg~i~vwd 478 (502)
++|+|++.+ |++|+.||.|+|||
T Consensus 318 ~~~s~dg~~-l~s~s~D~~i~iWd 340 (340)
T 1got_B 318 LGVTDDGMA-VATGSWDSFLKIWN 340 (340)
T ss_dssp EEECTTSSC-EEEEETTSCEEEEC
T ss_pred EEEcCCCCE-EEEEcCCccEEecC
Confidence 999999995 99999999999996
No 6
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.2e-41 Score=330.99 Aligned_cols=299 Identities=21% Similarity=0.319 Sum_probs=240.3
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEe
Q 010748 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g 215 (502)
..|...|.+++|+|++++|++|+.++ .++||....... ...+..|. ....+++| +|++++||+|
T Consensus 63 ~gH~~~V~~~~~sp~~~~l~s~s~D~---~v~iWd~~~~~~--~~~~~~h~----~~v~~~~~-------s~~g~~las~ 126 (380)
T 3iz6_a 63 QGHSGKVYSLDWTPEKNWIVSASQDG---RLIVWNALTSQK--THAIKLHC----PWVMECAF-------APNGQSVACG 126 (380)
T ss_dssp CCCSSCEEEEEECTTSSCEEEEETTS---EEEEEETTTTEE--EEEEECCC----TTCCCCEE-------CTTSSEEEEC
T ss_pred cccccEEEEEEEcCCCCEEEEEeCCC---eEEEEECCCCcc--ceEEecCC----CCEEEEEE-------CCCCCEEEEe
Confidence 46899999999999999999999887 456665433321 11112222 22345555 8999999999
Q ss_pred cCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEe
Q 010748 216 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWD 295 (502)
Q Consensus 216 ~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd 295 (502)
+.|+.|+||++....... ........+.+|...|.++.|+|++...|++|+.|++|++||
T Consensus 127 ~~d~~v~iw~~~~~~~~~--------------------~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd 186 (380)
T 3iz6_a 127 GLDSACSIFNLSSQADRD--------------------GNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWD 186 (380)
T ss_dssp CSSSCCEEEECCCCSSCC--------------------CSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEEC
T ss_pred eCCCcEEEEECCCCcccc--------------------CCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEE
Confidence 999999999997532111 112233456789999999999998777899999999999999
Q ss_pred CCCCeeeEee-----ccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCC-CCccceEeecCCeeEEEeCCCCCCEEE
Q 010748 296 VAAGKCNLTL-----EHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS-THSGFKWAVAADVESLAWDPHAEHSFV 369 (502)
Q Consensus 296 ~~~~~~~~~~-----~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~~~~~v~~v~~~~~~~~~~~ 369 (502)
+.+++++..+ .+|...|.++.|++.++.+|++|+.|++|++||++.. ........|...|.+++|+|++. +|+
T Consensus 187 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~ 265 (380)
T 3iz6_a 187 VTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQ-RFG 265 (380)
T ss_dssp TTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSS-EEE
T ss_pred cCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCC-eEE
Confidence 9999988877 6799999999999855589999999999999999854 44555567899999999999865 899
Q ss_pred EEeCCCcEEEEECCCCCCCCCCCCCccceEEeccC-------CCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEE
Q 010748 370 VSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHD-------KAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCI 442 (502)
Q Consensus 370 ~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~-------~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~ 442 (502)
+|+.||.|++||++++ ..+..+..+. ..|++++|+|++ .+|++|+.||.|++||+..++. +
T Consensus 266 s~s~D~~i~lwd~~~~---------~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~g~~dg~i~vwd~~~~~~--~ 333 (380)
T 3iz6_a 266 TGSDDGTCRLFDMRTG---------HQLQVYNREPDRNDNELPIVTSVAFSISG-RLLFAGYSNGDCYVWDTLLAEM--V 333 (380)
T ss_dssp EECSSSCEEEEETTTT---------EEEEEECCCCSSSCCSSCSCSEEEECSSS-SEEEEECTTSCEEEEETTTCCE--E
T ss_pred EEcCCCeEEEEECCCC---------cEEEEecccccccccccCceEEEEECCCC-CEEEEEECCCCEEEEECCCCce--E
Confidence 9999999999999986 4455544332 358999999998 9999999999999999988873 3
Q ss_pred EEe----cCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcc
Q 010748 443 ASR----NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 484 (502)
Q Consensus 443 ~~~----~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~ 484 (502)
..+ .+|.+.|++++|+|++. .|++|+.||+|+||++.....
T Consensus 334 ~~~~~~~~~h~~~v~~l~~s~dg~-~l~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 334 LNLGTLQNSHEGRISCLGLSSDGS-ALCTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp EEECCSCSSCCCCCCEEEECSSSS-EEEEECTTSCEEEEECCSSSS
T ss_pred EEEecccCCCCCceEEEEECCCCC-EEEEeeCCCCEEEEecCCCcc
Confidence 333 67999999999999999 599999999999999976543
No 7
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.2e-39 Score=318.59 Aligned_cols=290 Identities=17% Similarity=0.256 Sum_probs=237.6
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010748 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~ 216 (502)
.|...|.+++|+|++++|++|+.++ .++||.. ... .. .+.-........+++| +|+|++||+|+
T Consensus 62 gH~~~V~~~~~s~d~~~l~s~s~Dg---~v~vWd~--~~~---~~-~~~~~~~~~~v~~~~~-------sp~g~~lasg~ 125 (354)
T 2pbi_B 62 GHGNKVLCMDWCKDKRRIVSSSQDG---KVIVWDS--FTT---NK-EHAVTMPCTWVMACAY-------APSGCAIACGG 125 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTS---EEEEEET--TTC---CE-EEEEECSSSCCCEEEE-------CTTSSEEEEES
T ss_pred CCCCeEEEEEECCCCCEEEEEeCCC---eEEEEEC--CCC---Cc-ceEEecCCCCEEEEEE-------CCCCCEEEEee
Confidence 5889999999999999999999887 4555543 332 11 1111111233456666 89999999999
Q ss_pred CCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeC
Q 010748 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV 296 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~ 296 (502)
.|+.|++|++....... .......+.+|...|.+++|+|+ +..|++|+.|++|++||+
T Consensus 126 ~d~~i~v~~~~~~~~~~---------------------~~~~~~~~~~h~~~v~~~~~~~~-~~~l~t~s~D~~v~lwd~ 183 (354)
T 2pbi_B 126 LDNKCSVYPLTFDKNEN---------------------MAAKKKSVAMHTNYLSACSFTNS-DMQILTASGDGTCALWDV 183 (354)
T ss_dssp TTSEEEEEECCCCTTCC---------------------SGGGCEEEEECSSCEEEEEECSS-SSEEEEEETTSEEEEEET
T ss_pred CCCCEEEEEEecccccc---------------------ccccceeeeccCCcEEEEEEeCC-CCEEEEEeCCCcEEEEeC
Confidence 99999999986432111 01222344579999999999999 568999999999999999
Q ss_pred CCCeeeEeeccCCCCeEEEEEcCCC-CcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEEEEEeCCC
Q 010748 297 AAGKCNLTLEHHTDKVQAVAWNHHS-PQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDG 375 (502)
Q Consensus 297 ~~~~~~~~~~~h~~~v~~l~~~~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg 375 (502)
.+++++..+.+|...|.+++|+|.. +.+|++|+.||+|++||+++++.......|...|.+++|+|++. ++++++.|+
T Consensus 184 ~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~ 262 (354)
T 2pbi_B 184 ESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGD-AFASGSDDA 262 (354)
T ss_dssp TTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS-EEEEEETTS
T ss_pred CCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCC-EEEEEeCCC
Confidence 9999999999999999999999853 27999999999999999999887766667889999999999865 899999999
Q ss_pred cEEEEECCCCCCCCCCCCCccceEEec--cCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCcEE
Q 010748 376 TIKGFDIRTAKSDPDSTSQQSSFTLHA--HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVF 453 (502)
Q Consensus 376 ~v~i~d~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~ 453 (502)
.|++||++.. ..+..+.. +...+++++|+|++ .+|++|+.|+.|++||+.+++ .+..+.+|.+.|+
T Consensus 263 ~v~lwd~~~~---------~~~~~~~~~~~~~~~~~~~~s~~g-~~l~~g~~d~~i~vwd~~~~~--~~~~l~~h~~~v~ 330 (354)
T 2pbi_B 263 TCRLYDLRAD---------REVAIYSKESIIFGASSVDFSLSG-RLLFAGYNDYTINVWDVLKGS--RVSILFGHENRVS 330 (354)
T ss_dssp CEEEEETTTT---------EEEEEECCTTCCSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCS--EEEEECCCSSCEE
T ss_pred eEEEEECCCC---------cEEEEEcCCCcccceeEEEEeCCC-CEEEEEECCCcEEEEECCCCc--eEEEEECCCCcEE
Confidence 9999999976 33444433 34578999999998 999999999999999998887 5667889999999
Q ss_pred EEEEcCCCCcEEEEEeCCCcEEEEE
Q 010748 454 SVAFSEDSPFVLAIGGSKGKLEIWD 478 (502)
Q Consensus 454 ~~~~spd~~~ll~sg~~dg~i~vwd 478 (502)
+++|+|++.+ |++|+.||+|+||+
T Consensus 331 ~l~~spdg~~-l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 331 TLRVSPDGTA-FCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEECTTSSC-EEEEETTSEEEEEC
T ss_pred EEEECCCCCE-EEEEcCCCCEEecC
Confidence 9999999995 99999999999995
No 8
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.8e-40 Score=315.11 Aligned_cols=289 Identities=20% Similarity=0.261 Sum_probs=234.9
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010748 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~ 216 (502)
.|.+.|.+++|+|++++|++|+.++ .++||.+..... ...+..|.. ...++.| +|++++|++|+
T Consensus 11 ~h~~~V~~~~fsp~~~~l~s~~~dg---~v~lWd~~~~~~--~~~~~~~~~----~v~~~~~-------~~~~~~l~s~s 74 (304)
T 2ynn_A 11 NRSDRVKGIDFHPTEPWVLTTLYSG---RVELWNYETQVE--VRSIQVTET----PVRAGKF-------IARKNWIIVGS 74 (304)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTS---EEEEEETTTTEE--EEEEECCSS----CEEEEEE-------EGGGTEEEEEE
T ss_pred CCCCceEEEEECCCCCEEEEEcCCC---cEEEEECCCCce--eEEeeccCC----cEEEEEE-------eCCCCEEEEEC
Confidence 4778999999999999999999887 556665543321 111122222 2245665 68899999999
Q ss_pred CCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeC
Q 010748 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV 296 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~ 296 (502)
.|+.|++||+.++.. ...+.+|...|++++|+|+ +.+|++|+.|++|++||+
T Consensus 75 ~d~~i~vwd~~~~~~---------------------------~~~~~~h~~~v~~~~~~~~-~~~l~sgs~D~~v~lWd~ 126 (304)
T 2ynn_A 75 DDFRIRVFNYNTGEK---------------------------VVDFEAHPDYIRSIAVHPT-KPYVLSGSDDLTVKLWNW 126 (304)
T ss_dssp TTSEEEEEETTTCCE---------------------------EEEEECCSSCEEEEEECSS-SSEEEEEETTSCEEEEEG
T ss_pred CCCEEEEEECCCCcE---------------------------EEEEeCCCCcEEEEEEcCC-CCEEEEECCCCeEEEEEC
Confidence 999999999976432 2245589999999999999 569999999999999999
Q ss_pred CCC-eeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceE-eecCCeeEEEeCCC-CCCEEEEEeC
Q 010748 297 AAG-KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-AVAADVESLAWDPH-AEHSFVVSLE 373 (502)
Q Consensus 297 ~~~-~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~v~~v~~~~~-~~~~~~~~~~ 373 (502)
.++ .+...+.+|...|.+++|+|.++.+|++|+.|++|++||++......... .+...+..+.|+|. ...++++|+.
T Consensus 127 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~ 206 (304)
T 2ynn_A 127 ENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASD 206 (304)
T ss_dssp GGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEET
T ss_pred CCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcC
Confidence 887 56677899999999999999655899999999999999998776554333 34577999999874 2358999999
Q ss_pred CCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCcEE
Q 010748 374 DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVF 453 (502)
Q Consensus 374 dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~ 453 (502)
||.|++||+++. .++..+.+|...|++++|+|++ .+|++|+.||+|++||+.+.+ +...+..|...++
T Consensus 207 D~~i~iWd~~~~---------~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~Dg~i~iWd~~~~~--~~~~~~~~~~~~~ 274 (304)
T 2ynn_A 207 DLTIKIWDYQTK---------SCVATLEGHMSNVSFAVFHPTL-PIIISGSEDGTLKIWNSSTYK--VEKTLNVGLERSW 274 (304)
T ss_dssp TSEEEEEETTTT---------EEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCC--EEEEECCSSSSEE
T ss_pred CCeEEEEeCCCC---------ccceeeCCCCCCEEEEEECCCC-CEEEEEcCCCeEEEEECCCCc--eeeeccCCCccEE
Confidence 999999999986 7888999999999999999998 899999999999999999987 6777888889999
Q ss_pred EEEEcCCCCcE-EEEEeCCCcEEEEECCCC
Q 010748 454 SVAFSEDSPFV-LAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 454 ~~~~spd~~~l-l~sg~~dg~i~vwd~~~~ 482 (502)
+++|+|++... +++|+. ..+.+|++...
T Consensus 275 ~~~~~~~~~~~~~asg~~-~g~~~~~~~~~ 303 (304)
T 2ynn_A 275 CIATHPTGRKNYIASGFD-NGFTVLSLGND 303 (304)
T ss_dssp EEEECTTCGGGCEEEEET-TEEEEEECC--
T ss_pred EEEECCCCCceEEEEecC-CceEEEEeccC
Confidence 99999988533 666654 55888887653
No 9
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=316.76 Aligned_cols=308 Identities=22% Similarity=0.354 Sum_probs=235.7
Q ss_pred CCcc-ccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCC-CeeeeeccccCCCcceeeeecCCCCCCCCCCEEEE
Q 010748 137 EDSE-DLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDP-NLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAV 214 (502)
Q Consensus 137 ~~~~-~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~ 214 (502)
.|.. .|.+++|+|++++||+|+.++ .++||.......... .+...|. ....+++| +|++++||+
T Consensus 13 ~h~~~~v~~l~~sp~g~~las~~~D~---~i~iw~~~~~~~~~~~~~~~~h~----~~v~~~~~-------sp~g~~l~s 78 (345)
T 3fm0_A 13 AHPDSRCWFLAWNPAGTLLASCGGDR---RIRIWGTEGDSWICKSVLSEGHQ----RTVRKVAW-------SPCGNYLAS 78 (345)
T ss_dssp CSTTSCEEEEEECTTSSCEEEEETTS---CEEEEEEETTEEEEEEEECSSCS----SCEEEEEE-------CTTSSEEEE
T ss_pred CCCCCcEEEEEECCCCCEEEEEcCCC---eEEEEEcCCCcceeeeeeccccC----CcEEEEEE-------CCCCCEEEE
Confidence 3555 899999999999999999887 678887765421000 0111222 22367777 799999999
Q ss_pred ecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEE
Q 010748 215 GSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIW 294 (502)
Q Consensus 215 g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vw 294 (502)
|+.|+.|+||++.... ......+.+|...|.+++|+|+ +++|++|+.|++|++|
T Consensus 79 ~s~D~~v~iw~~~~~~-------------------------~~~~~~~~~h~~~v~~v~~sp~-~~~l~s~s~D~~v~iw 132 (345)
T 3fm0_A 79 ASFDATTCIWKKNQDD-------------------------FECVTTLEGHENEVKSVAWAPS-GNLLATCSRDKSVWVW 132 (345)
T ss_dssp EETTSCEEEEEECCC--------------------------EEEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEE
T ss_pred EECCCcEEEEEccCCC-------------------------eEEEEEccCCCCCceEEEEeCC-CCEEEEEECCCeEEEE
Confidence 9999999999986421 1123345689999999999999 6699999999999999
Q ss_pred eCCCC---eeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCc--cceEeecCCeeEEEeCCCCCCEEE
Q 010748 295 DVAAG---KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS--GFKWAVAADVESLAWDPHAEHSFV 369 (502)
Q Consensus 295 d~~~~---~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~--~~~~~~~~~v~~v~~~~~~~~~~~ 369 (502)
|+.++ .++..+.+|...|.+++|+|++ .+|++|+.|++|++|+++..... .....|...|.+++|+|++. +|+
T Consensus 133 d~~~~~~~~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~-~l~ 210 (345)
T 3fm0_A 133 EVDEEDEYECVSVLNSHTQDVKHVVWHPSQ-ELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQ-RLA 210 (345)
T ss_dssp EECTTSCEEEEEEECCCCSCEEEEEECSSS-SCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSS-EEE
T ss_pred ECCCCCCeEEEEEecCcCCCeEEEEECCCC-CEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCC-EEE
Confidence 99876 4567788999999999999999 89999999999999999876532 33456788999999999865 899
Q ss_pred EEeCCCcEEEEECCCCCCCCCC------CCCccceEEec-cCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCC----
Q 010748 370 VSLEDGTIKGFDIRTAKSDPDS------TSQQSSFTLHA-HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ---- 438 (502)
Q Consensus 370 ~~~~dg~v~i~d~~~~~~~~~~------~~~~~~~~~~~-h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~---- 438 (502)
+++.||.|++|+.......... ....++..+.+ |...|.+++|+|.+ .+|++++.|+.|++|+.....
T Consensus 211 s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~i~vw~~~~~~~~~~ 289 (345)
T 3fm0_A 211 SCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLT-GALATACGDDAIRVFQEDPNSDPQQ 289 (345)
T ss_dssp EEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTT-CCEEEEETTSCEEEEEECTTSCTTS
T ss_pred EEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCC-CEEEEEeCCCeEEEEEeCCCCCcce
Confidence 9999999999997543221100 00122334444 88999999999998 889999999999999987542
Q ss_pred e---eEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccc
Q 010748 439 P---SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 487 (502)
Q Consensus 439 ~---~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~ 487 (502)
+ .......+|...|++++|+|+++.+||+|+.||+|++|++.+++.+..
T Consensus 290 ~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~ 341 (345)
T 3fm0_A 290 PTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHH 341 (345)
T ss_dssp CCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC------
T ss_pred eeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCccc
Confidence 1 112234689999999999999866799999999999999988776543
No 10
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.8e-38 Score=303.42 Aligned_cols=250 Identities=19% Similarity=0.305 Sum_probs=216.3
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEE
Q 010748 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.+++| +|++++||+|+.||.|+|||+.+... ...+..|..+|.+++
T Consensus 17 ~~~~f-------sp~~~~l~s~~~dg~v~lWd~~~~~~---------------------------~~~~~~~~~~v~~~~ 62 (304)
T 2ynn_A 17 KGIDF-------HPTEPWVLTTLYSGRVELWNYETQVE---------------------------VRSIQVTETPVRAGK 62 (304)
T ss_dssp EEEEE-------CSSSSEEEEEETTSEEEEEETTTTEE---------------------------EEEEECCSSCEEEEE
T ss_pred EEEEE-------CCCCCEEEEEcCCCcEEEEECCCCce---------------------------eEEeeccCCcEEEEE
Confidence 57766 89999999999999999999975322 223457889999999
Q ss_pred eccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCc-cceEeec
Q 010748 274 WNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS-GFKWAVA 352 (502)
Q Consensus 274 ~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~-~~~~~~~ 352 (502)
|+|+ +++|++|+.|++|++||+.+++++..+.+|...|.+++|+|++ .+|++|+.|++|++||+++.... .....|.
T Consensus 63 ~~~~-~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~ 140 (304)
T 2ynn_A 63 FIAR-KNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWALEQTFEGHE 140 (304)
T ss_dssp EEGG-GTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEEGGGTTEEEEEECCCC
T ss_pred EeCC-CCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCC-CEEEEECCCCeEEEEECCCCcchhhhhcccC
Confidence 9999 5699999999999999999999999999999999999999999 89999999999999999876443 3345688
Q ss_pred CCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEE-eccCCCeeEEEEcCC-CCCEEEEEeCCCcEE
Q 010748 353 ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPL-VPNLLATGSTDKMVK 430 (502)
Q Consensus 353 ~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp~-~~~~l~t~s~dg~i~ 430 (502)
..|.+++|+|.+..++++|+.||.|++||++.. .+...+ ..|...+..+.|+|. ...+|++|+.|++|+
T Consensus 141 ~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~ 211 (304)
T 2ynn_A 141 HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS---------TPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIK 211 (304)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSEEEEEETTCS---------SCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEE
T ss_pred CcEEEEEECCCCCCEEEEEeCCCeEEEEECCCC---------CccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEE
Confidence 899999999976679999999999999999876 334444 456788999999873 237999999999999
Q ss_pred EEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccccC
Q 010748 431 LWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSK 491 (502)
Q Consensus 431 vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~~~ 491 (502)
+||+++++ ++..+.+|...|.+++|+|+++ +|++|+.||.|+|||+.+++.+.....+
T Consensus 212 iWd~~~~~--~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~Dg~i~iWd~~~~~~~~~~~~~ 269 (304)
T 2ynn_A 212 IWDYQTKS--CVATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSSTYKVEKTLNVG 269 (304)
T ss_dssp EEETTTTE--EEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCCEEEEECCS
T ss_pred EEeCCCCc--cceeeCCCCCCEEEEEECCCCC-EEEEEcCCCeEEEEECCCCceeeeccCC
Confidence 99999887 6778889999999999999999 6999999999999999998887665443
No 11
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.3e-38 Score=311.44 Aligned_cols=299 Identities=22% Similarity=0.334 Sum_probs=231.7
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccc--------------cCCCcceeeeecCC
Q 010748 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHII--------------IPAFPLCMAWLDCP 202 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~--------------~~~~~~~~~~~~~~ 202 (502)
.|...|.+++|+|+|++||+|+. + .++||....... ......|... ...+..+++|
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~~-~---~v~i~~~~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---- 131 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGCN-K---TTQVYRVSDGSL--VARLSDDSAANKDPENLNTSSSPSSDLYIRSVCF---- 131 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEECB-S---CEEEEETTTCCE--EEEECC-----------------CCCCBEEEEEE----
T ss_pred CCCCEEEEEEECCCCCEEEEEcC-C---cEEEEEecCCCE--EEEecCccccccccccccccccCCCceeEEEEEE----
Confidence 47889999999999999999863 3 456665543321 0111111100 0011345555
Q ss_pred CCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEE
Q 010748 203 LKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNIL 282 (502)
Q Consensus 203 ~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l 282 (502)
+|+|++||+|+.|+.|+|||+.+.. ....+.+|...|.+++|+|+ +.+|
T Consensus 132 ---s~dg~~l~s~~~d~~i~iwd~~~~~---------------------------~~~~~~~h~~~v~~~~~~p~-~~~l 180 (393)
T 1erj_A 132 ---SPDGKFLATGAEDRLIRIWDIENRK---------------------------IVMILQGHEQDIYSLDYFPS-GDKL 180 (393)
T ss_dssp ---CTTSSEEEEEETTSCEEEEETTTTE---------------------------EEEEECCCSSCEEEEEECTT-SSEE
T ss_pred ---CCCCCEEEEEcCCCeEEEEECCCCc---------------------------EEEEEccCCCCEEEEEEcCC-CCEE
Confidence 8999999999999999999997532 22345689999999999999 5699
Q ss_pred EEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccce-------EeecCCe
Q 010748 283 ASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK-------WAVAADV 355 (502)
Q Consensus 283 ~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-------~~~~~~v 355 (502)
++|+.|++|++||+.++++...+. +...+.+++|+|..+.+|++|+.||.|++||++++...... ..|...|
T Consensus 181 ~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v 259 (393)
T 1erj_A 181 VSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSV 259 (393)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCE
T ss_pred EEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCE
Confidence 999999999999999999888876 56789999999944489999999999999999987654332 3577889
Q ss_pred eEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCC---CCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEE
Q 010748 356 ESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPD---STSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 432 (502)
Q Consensus 356 ~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~---~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vw 432 (502)
.+++|+|++. ++++|+.||.|++||+++...... .....+...+.+|...|.+++|+|++ .+|++|+.|+.|++|
T Consensus 260 ~~v~~~~~g~-~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~iw 337 (393)
T 1erj_A 260 YSVVFTRDGQ-SVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQND-EYILSGSKDRGVLFW 337 (393)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGG-CEEEEEETTSEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCC-CEEEEEeCCCeEEEE
Confidence 9999999875 899999999999999987532110 00123456778999999999999998 899999999999999
Q ss_pred ECCCCCeeEEEEecCCCCcEEEEEEcC------CCCcEEEEEeCCCcEEEEECCCC
Q 010748 433 DLSNNQPSCIASRNPKAGAVFSVAFSE------DSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 433 d~~~~~~~~~~~~~~~~~~v~~~~~sp------d~~~ll~sg~~dg~i~vwd~~~~ 482 (502)
|+.+++ .+..+.+|.+.|.+++|++ ++. +|++|+.||+|+||++...
T Consensus 338 d~~~~~--~~~~l~~h~~~v~~v~~~~~~~~~p~~~-~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 338 DKKSGN--PLLMLQGHRNSVISVAVANGSSLGPEYN-VFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp ETTTCC--EEEEEECCSSCEEEEEECSSCTTCTTCE-EEEEEETTSEEEEEEEEEC
T ss_pred ECCCCe--EEEEECCCCCCEEEEEecCCcCcCCCCC-EEEEECCCCcEEECccccc
Confidence 999988 5667789999999999987 566 6999999999999998653
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=8.3e-38 Score=299.88 Aligned_cols=287 Identities=20% Similarity=0.349 Sum_probs=234.3
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEe
Q 010748 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g 215 (502)
..|...|.+++|+|++++|++|+.++ .++||...... ....+..|.. ...+++| +|++++|++|
T Consensus 20 ~gh~~~v~~~~~s~~~~~l~s~~~dg---~i~iw~~~~~~--~~~~~~~h~~----~v~~~~~-------~~~~~~l~s~ 83 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNGEWLASSSADK---LIKIWGAYDGK--FEKTISGHKL----GISDVAW-------SSDSNLLVSA 83 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTS---CEEEEETTTCC--EEEEECCCSS----CEEEEEE-------CTTSSEEEEE
T ss_pred cccCCcEEEEEECCCCCEEEEeeCCC---eEEEEeCCCcc--cchhhccCCC----ceEEEEE-------cCCCCEEEEE
Confidence 45889999999999999999999887 45666543322 1111222322 2357777 7899999999
Q ss_pred cCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEe
Q 010748 216 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWD 295 (502)
Q Consensus 216 ~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd 295 (502)
+.|+.|++||+.+... ...+.+|...|.+++|+|+ +.+|++|+.|++|++||
T Consensus 84 ~~d~~i~vwd~~~~~~---------------------------~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~i~iwd 135 (312)
T 4ery_A 84 SDDKTLKIWDVSSGKC---------------------------LKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWD 135 (312)
T ss_dssp ETTSEEEEEETTTCCE---------------------------EEEEECCSSCEEEEEECSS-SSEEEEEETTSCEEEEE
T ss_pred CCCCEEEEEECCCCcE---------------------------EEEEcCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEE
Confidence 9999999999975332 2234579999999999999 56999999999999999
Q ss_pred CCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceE-eecCCeeEEEeCCCCCCEEEEEeCC
Q 010748 296 VAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-AVAADVESLAWDPHAEHSFVVSLED 374 (502)
Q Consensus 296 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~v~~v~~~~~~~~~~~~~~~d 374 (502)
+.+++++..+..|...|.+++|+|++ .+|++++.||.|++||+++.+...... .+...+.+++|+|++. ++++++.|
T Consensus 136 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d 213 (312)
T 4ery_A 136 VKTGKCLKTLPAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK-YILAATLD 213 (312)
T ss_dssp TTTCCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSS-EEEEEETT
T ss_pred CCCCEEEEEecCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCC-EEEEEcCC
Confidence 99999999999999999999999998 899999999999999999876554332 3456799999999875 89999999
Q ss_pred CcEEEEECCCCCCCCCCCCCccceEEeccCCCeeE--EEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCcE
Q 010748 375 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCT--ISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAV 452 (502)
Q Consensus 375 g~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~--l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v 452 (502)
|.|++||+++. ..+..+.+|...+.+ ..+++.++.+|++|+.||.|++||+.+++ .+..+.+|...|
T Consensus 214 ~~i~iwd~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~--~~~~~~~h~~~v 282 (312)
T 4ery_A 214 NTLKLWDYSKG---------KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE--IVQKLQGHTDVV 282 (312)
T ss_dssp TEEEEEETTTT---------EEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC--EEEEECCCSSCE
T ss_pred CeEEEEECCCC---------cEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch--hhhhhhccCCcE
Confidence 99999999986 677778888765433 34554444899999999999999999887 577888999999
Q ss_pred EEEEEcCCCCcEEEEEe--CCCcEEEEECC
Q 010748 453 FSVAFSEDSPFVLAIGG--SKGKLEIWDTL 480 (502)
Q Consensus 453 ~~~~~spd~~~ll~sg~--~dg~i~vwd~~ 480 (502)
.+++|+|+++ +|++++ .|+.|++|+..
T Consensus 283 ~~~~~~p~~~-~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 283 ISTACHPTEN-IIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEEECSSSS-EEEEEECTTTCCEEEEECC
T ss_pred EEEeecCcCC-ceEEEEccCCccEEEecCC
Confidence 9999999999 577776 69999999863
No 13
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.2e-37 Score=299.84 Aligned_cols=288 Identities=17% Similarity=0.294 Sum_probs=231.6
Q ss_pred CCCccccccccccCCC-ceEEEEEecCCcceeEEEEEecCCCCC---CCeeeeeccccCCCcceeeeecCCCCCCCCCCE
Q 010748 136 DEDSEDLEDMTINPND-AVIVCARNEDDVSHLEVYILEESDGGD---PNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNF 211 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~-~~l~~~~~~~~~~~l~v~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 211 (502)
..|...|.+++|+|++ ++|++|+.++ .+++|.+....... ...+..|.. ...++.| +|++++
T Consensus 14 ~gH~~~V~~l~~~~~~~~~l~s~s~D~---~v~~W~~~~~~~~~~~~~~~~~~h~~----~v~~~~~-------s~dg~~ 79 (319)
T 3frx_A 14 EGHNGWVTSLATSAGQPNLLLSASRDK---TLISWKLTGDDQKFGVPVRSFKGHSH----IVQDCTL-------TADGAY 79 (319)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTS---EEEEEEEEEETTEEEEEEEEEECCSS----CEEEEEE-------CTTSSE
T ss_pred ccccceEEEEEccCCCccEEEEecCCc---cEEEecCCCCCccccccceEEeCCcc----cEEEEEE-------CCCCCE
Confidence 4589999999999975 8999999887 67888776433200 011222322 2256666 799999
Q ss_pred EEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcE
Q 010748 212 MAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQV 291 (502)
Q Consensus 212 la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v 291 (502)
|++|+.|++|+|||+.++.. ...+.+|...|.+++|+|+ +.+|++|+.|++|
T Consensus 80 l~s~s~D~~v~~wd~~~~~~---------------------------~~~~~~h~~~v~~~~~~~~-~~~l~s~s~D~~i 131 (319)
T 3frx_A 80 ALSASWDKTLRLWDVATGET---------------------------YQRFVGHKSDVMSVDIDKK-ASMIISGSRDKTI 131 (319)
T ss_dssp EEEEETTSEEEEEETTTTEE---------------------------EEEEECCSSCEEEEEECTT-SCEEEEEETTSCE
T ss_pred EEEEeCCCEEEEEECCCCCe---------------------------eEEEccCCCcEEEEEEcCC-CCEEEEEeCCCeE
Confidence 99999999999999976432 2245589999999999999 5699999999999
Q ss_pred EEEeCCCCeeeEeeccCCCCeEEEEEcCCC-----CcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCC
Q 010748 292 KIWDVAAGKCNLTLEHHTDKVQAVAWNHHS-----PQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEH 366 (502)
Q Consensus 292 ~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~-----~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~ 366 (502)
++||+. ++++..+.+|...|.++.|+|.. ..+|++++.|+.|++||+++.........|...|.+++|+|++.
T Consensus 132 ~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~- 209 (319)
T 3frx_A 132 KVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGT- 209 (319)
T ss_dssp EEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSS-
T ss_pred EEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCC-
Confidence 999986 56778889999999999999864 24899999999999999998776666667899999999999865
Q ss_pred EEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEec
Q 010748 367 SFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRN 446 (502)
Q Consensus 367 ~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~ 446 (502)
+|++++.||.|++||+++. ..+..+.. ...|.+++|+|++ .+|++++.+ .+++|++..... +..+.
T Consensus 210 ~l~s~~~dg~i~iwd~~~~---------~~~~~~~~-~~~v~~~~~sp~~-~~la~~~~~-~i~v~~~~~~~~--~~~~~ 275 (319)
T 3frx_A 210 LIASAGKDGEIMLWNLAAK---------KAMYTLSA-QDEVFSLAFSPNR-YWLAAATAT-GIKVFSLDPQYL--VDDLR 275 (319)
T ss_dssp EEEEEETTCEEEEEETTTT---------EEEEEEEC-CSCEEEEEECSSS-SEEEEEETT-EEEEEEETTEEE--EEEEC
T ss_pred EEEEEeCCCeEEEEECCCC---------cEEEEecC-CCcEEEEEEcCCC-CEEEEEcCC-CcEEEEeCcCee--eeccC
Confidence 8999999999999999986 56666664 4689999999998 888887755 599999987652 33322
Q ss_pred --------CCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCC
Q 010748 447 --------PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 447 --------~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~ 482 (502)
.|...+.+++|+|+|++ |++|+.||.|+|||+.++
T Consensus 276 ~~~~~~~~~~~~~v~~~~~spdg~~-l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 276 PEFAGYSKAAEPHAVSLAWSADGQT-LFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp CCCTTCCGGGCCCEEEEEECTTSSE-EEEEETTSCEEEEEEEEC
T ss_pred ccccccccCcCcceeEEEECCCCCE-EEEeecCceEEEEEEeec
Confidence 23567999999999994 899999999999999764
No 14
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=6.6e-38 Score=312.46 Aligned_cols=250 Identities=22% Similarity=0.331 Sum_probs=224.1
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEE
Q 010748 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.|+.| +|++++|++|+.||.|+|||+.++.. ...+.+|...|++++
T Consensus 112 ~~~~~-------~p~~~~l~s~s~Dg~i~vwd~~~~~~---------------------------~~~l~~h~~~V~~v~ 157 (410)
T 1vyh_C 112 TRVIF-------HPVFSVMVSASEDATIKVWDYETGDF---------------------------ERTLKGHTDSVQDIS 157 (410)
T ss_dssp EEEEE-------CSSSSEEEEEESSSCEEEEETTTCCC---------------------------CEEECCCSSCEEEEE
T ss_pred EEEEE-------cCCCCEEEEEeCCCeEEEEECCCCcE---------------------------EEEEeccCCcEEEEE
Confidence 67777 78999999999999999999976432 234568999999999
Q ss_pred eccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecC
Q 010748 274 WNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAA 353 (502)
Q Consensus 274 ~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~ 353 (502)
|+|+ +.+|++|+.|++|++||+.+++++.++.+|...|.+++|+|++ .+|++|+.|++|++||++++........|..
T Consensus 158 ~~~~-~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~-~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~ 235 (410)
T 1vyh_C 158 FDHS-GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235 (410)
T ss_dssp ECTT-SSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred EcCC-CCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCcEEEEEeCCCc
Confidence 9998 5699999999999999999999999999999999999999998 8999999999999999999887776778889
Q ss_pred CeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCC-----------------
Q 010748 354 DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLV----------------- 416 (502)
Q Consensus 354 ~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~----------------- 416 (502)
.|.++.|+|++. ++++|+.||.|++||+++. .....+..|...|.+++|+|++
T Consensus 236 ~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~---------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (410)
T 1vyh_C 236 WVRMVRPNQDGT-LIASCSNDQTVRVWVVATK---------ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSG 305 (410)
T ss_dssp CEEEEEECTTSS-EEEEEETTSCEEEEETTTC---------CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-----
T ss_pred cEEEEEECCCCC-EEEEEcCCCeEEEEECCCC---------ceeeEecCCCceEEEEEEcCcccccchhhhccccccccC
Confidence 999999999865 8999999999999999886 6778889999999999999962
Q ss_pred --CCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccccCC
Q 010748 417 --PNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKY 492 (502)
Q Consensus 417 --~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~~~~ 492 (502)
+.+|++|+.|+.|++||++++. ++..+.+|.+.|++++|+|++.+ |++|+.||.|++||+.+++++....+|.
T Consensus 306 ~~g~~l~sgs~D~~i~iwd~~~~~--~~~~~~~h~~~v~~v~~~~~g~~-l~s~s~D~~i~vwd~~~~~~~~~~~~h~ 380 (410)
T 1vyh_C 306 KPGPFLLSGSRDKTIKMWDVSTGM--CLMTLVGHDNWVRGVLFHSGGKF-ILSCADDKTLRVWDYKNKRCMKTLNAHE 380 (410)
T ss_dssp --CCEEEEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSC-EEEEETTTEEEEECCTTSCCCEEEECCS
T ss_pred CCCCEEEEEeCCCeEEEEECCCCc--eEEEEECCCCcEEEEEEcCCCCE-EEEEeCCCeEEEEECCCCceEEEEcCCC
Confidence 2689999999999999999887 67778889999999999999996 8899999999999999988877665543
No 15
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-37 Score=301.90 Aligned_cols=305 Identities=18% Similarity=0.298 Sum_probs=220.8
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010748 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~ 216 (502)
.|...|.++.|+|+ +|++|+.++ .+++|.+...... .+.............+++| +|++++||+|+
T Consensus 12 ~h~~~v~~~~~s~~--~las~~~D~---~i~lw~~~~~~~~--~~~~~~~~~h~~~v~~v~~-------sp~~~~las~s 77 (330)
T 2hes_X 12 LYKEKIWSFDFSQG--ILATGSTDR---KIKLVSVKYDDFT--LIDVLDETAHKKAIRSVAW-------RPHTSLLAAGS 77 (330)
T ss_dssp CCSSCEEEEEEETT--EEEEEESSS---CEEEEECSSSCCE--EEEEECTTCCCSCEEEEEE-------CTTSSEEEEEE
T ss_pred cCCCceeeeccCCC--EEEEEcCCC---EEEEEEecCCCeE--EEEEEecCCccCCEEEEEE-------CCCCCEEEEEe
Confidence 47889999999998 889998886 5677766543210 1111100001223367777 79999999999
Q ss_pred CCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeC
Q 010748 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV 296 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~ 296 (502)
.|+.|+||++...... .........+.+|...|++++|+|+ +.+|++|+.|++|++||+
T Consensus 78 ~D~~v~iw~~~~~~~~--------------------~~~~~~~~~~~~h~~~V~~v~~sp~-g~~las~s~D~~v~iwd~ 136 (330)
T 2hes_X 78 FDSTVSIWAKEESADR--------------------TFEMDLLAIIEGHENEVKGVAWSND-GYYLATCSRDKSVWIWET 136 (330)
T ss_dssp TTSCEEEEEC---------------------------CCCEEEEEEC----CEEEEEECTT-SCEEEEEETTSCEEEEEC
T ss_pred CCCcEEEEEcccCcCc--------------------cccceeEEEEcCCCCcEEEEEECCC-CCEEEEEeCCCEEEEEec
Confidence 9999999998532100 0011233456689999999999999 569999999999999999
Q ss_pred CC----CeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCC--CCccceEeecCCeeEEEeCCCC-CCEEE
Q 010748 297 AA----GKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS--THSGFKWAVAADVESLAWDPHA-EHSFV 369 (502)
Q Consensus 297 ~~----~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~--~~~~~~~~~~~~v~~v~~~~~~-~~~~~ 369 (502)
.. .+++..+.+|...|.+++|+|++ .+|++|+.|++|++||++.. ........|...|.+++|+|++ ...++
T Consensus 137 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 215 (330)
T 2hes_X 137 DESGEEYECISVLQEHSQDVKHVIWHPSE-ALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLC 215 (330)
T ss_dssp CTTCCCCEEEEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEE
T ss_pred cCCCCCeEEEEEeccCCCceEEEEECCCC-CEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEE
Confidence 43 25778889999999999999998 89999999999999998865 3344455788899999999974 34789
Q ss_pred EEeCCCcEEEEECCCCCCCCCCCCCccceEEec-cCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEE-ecC
Q 010748 370 VSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA-HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS-RNP 447 (502)
Q Consensus 370 ~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~-~~~ 447 (502)
+|+.|+.|++|+++........ .......+.. |...|.+++|++. .+|++++.||.|+||+..++....... ...
T Consensus 216 s~s~D~~v~iw~~~~~~~~~~~-~~~~~~~~~~~h~~~v~~v~~s~~--~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~ 292 (330)
T 2hes_X 216 SGSDDSTVRVWKYMGDDEDDQQ-EWVCEAILPDVHKRQVYNVAWGFN--GLIASVGADGVLAVYEEVDGEWKVFAKRALC 292 (330)
T ss_dssp EEETTSCEEEEEEEEECTTSCE-EEEEEEECCSCCSSCEEEEEECTT--SCEEEEETTSCEEEEEEETTEEEEEEEESCT
T ss_pred EEeCCCeEEEEEecCCCccccc-eeEEeeecccccccceEEEEEcCC--CEEEEEeCCCEEEEEEcCCCceEEEeccccc
Confidence 9999999999999764210000 0022333444 8999999999974 589999999999999998765323333 356
Q ss_pred CCC-cEEEEEEcC--CCCcEEEEEeCCCcEEEEECCC
Q 010748 448 KAG-AVFSVAFSE--DSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 448 ~~~-~v~~~~~sp--d~~~ll~sg~~dg~i~vwd~~~ 481 (502)
|.. .|.+++|+| ++. +|++|+.||.|+||++.+
T Consensus 293 h~~~~v~~v~~~~~~~~~-~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 293 HGVYEINVVKWLELNGKT-ILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp TTTSCEEEEEEC-----C-CEEEEETTSEEEEEEC--
T ss_pred cccceEEEEEEecCCCce-EEEEecCCCcEEEEEecc
Confidence 776 899999999 577 599999999999999864
No 16
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.3e-37 Score=324.45 Aligned_cols=293 Identities=18% Similarity=0.267 Sum_probs=234.1
Q ss_pred CccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC
Q 010748 138 DSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM 217 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~ 217 (502)
+...+.++.|+|+|++|++++ .+ .+.+|... .......+..|... ..|++| +|+|++||+|+.
T Consensus 17 ~~g~~~~~~~spdg~~l~~~~-~~---~v~l~~~~--~~~~~~~~~~h~~~----v~~~~~-------spdg~~lasg~~ 79 (611)
T 1nr0_A 17 ARGTAVVLGNTPAGDKIQYCN-GT---SVYTVPVG--SLTDTEIYTEHSHQ----TTVAKT-------SPSGYYCASGDV 79 (611)
T ss_dssp CTTCCCCCEECTTSSEEEEEE-TT---EEEEEETT--CSSCCEEECCCSSC----EEEEEE-------CTTSSEEEEEET
T ss_pred ccCceeEEeeCCCCCEEEeCC-CC---EEEEecCC--CcccCeEecCCCCc----eEEEEE-------CCCCcEEEEEeC
Confidence 356788999999999999987 33 44555443 33222344444332 256666 899999999999
Q ss_pred CCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecC----CcEEE
Q 010748 218 EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD----KQVKI 293 (502)
Q Consensus 218 dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~d----g~v~v 293 (502)
||+|+|||+..... .....+.+|...|.+++|+|++ .+|++++.+ ++|++
T Consensus 80 d~~v~lWd~~~~~~-------------------------~~~~~~~~~~~~v~~v~fs~dg-~~l~~~~~~~~~~~~v~~ 133 (611)
T 1nr0_A 80 HGNVRIWDTTQTTH-------------------------ILKTTIPVFSGPVKDISWDSES-KRIAAVGEGRERFGHVFL 133 (611)
T ss_dssp TSEEEEEESSSTTC-------------------------CEEEEEECSSSCEEEEEECTTS-CEEEEEECCSSCSEEEEE
T ss_pred CCCEEEeECCCCcc-------------------------eeeEeecccCCceEEEEECCCC-CEEEEEECCCCceeEEEE
Confidence 99999999864321 1122345799999999999994 578777765 46888
Q ss_pred EeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEEEEEeC
Q 010748 294 WDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE 373 (502)
Q Consensus 294 wd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~ 373 (502)
|| ++++...+.+|...|++++|+|+++..|++|+.|++|++||.+..+....+..|...|.+++|+|++. ++++++.
T Consensus 134 wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~-~las~s~ 210 (611)
T 1nr0_A 134 FD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGS-LFASTGG 210 (611)
T ss_dssp TT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSS-EEEEEET
T ss_pred ee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCC-EEEEEEC
Confidence 87 56677889999999999999999856799999999999999987766655667889999999999865 8999999
Q ss_pred CCcEEEEECCCCCCCCCCCCCccceEEe-------ccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeE-----
Q 010748 374 DGTIKGFDIRTAKSDPDSTSQQSSFTLH-------AHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSC----- 441 (502)
Q Consensus 374 dg~v~i~d~~~~~~~~~~~~~~~~~~~~-------~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~----- 441 (502)
|+.|++||+.++ .....+. +|...|.+++|+|++ .+|++++.|++|++||+.+++...
T Consensus 211 D~~i~lwd~~~g---------~~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~s~s~D~~v~lWd~~~~~~~~~~~~~ 280 (611)
T 1nr0_A 211 DGTIVLYNGVDG---------TKTGVFEDDSLKNVAHSGSVFGLTWSPDG-TKIASASADKTIKIWNVATLKVEKTIPVG 280 (611)
T ss_dssp TSCEEEEETTTC---------CEEEECBCTTSSSCSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred CCcEEEEECCCC---------cEeeeeccccccccccCCCEEEEEECCCC-CEEEEEeCCCeEEEEeCCCCceeeeecCC
Confidence 999999999876 4444552 799999999999998 999999999999999998765321
Q ss_pred ------------------------------------EEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccc
Q 010748 442 ------------------------------------IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGI 485 (502)
Q Consensus 442 ------------------------------------~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~ 485 (502)
...+.+|...|++++|+|+++ .|++++.|+.|++||+.++...
T Consensus 281 ~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~-~l~s~s~D~~v~~Wd~~~~~~~ 359 (611)
T 1nr0_A 281 TRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK-TLFSADAEGHINSWDISTGISN 359 (611)
T ss_dssp SSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEE
T ss_pred CCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC-EEEEEeCCCcEEEEECCCCcee
Confidence 234467899999999999999 5999999999999999988765
Q ss_pred cc
Q 010748 486 SN 487 (502)
Q Consensus 486 ~~ 487 (502)
..
T Consensus 360 ~~ 361 (611)
T 1nr0_A 360 RV 361 (611)
T ss_dssp EC
T ss_pred ee
Confidence 43
No 17
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=297.54 Aligned_cols=256 Identities=21% Similarity=0.343 Sum_probs=222.1
Q ss_pred cceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeE
Q 010748 193 PLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL 272 (502)
Q Consensus 193 ~~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 272 (502)
..+++|.+. ..+++.+|++|+.|++|+||++.... ......+.+|...|.++
T Consensus 35 V~~v~~~~~---~~~~~~~l~tgs~D~~v~vW~~~~~~-------------------------~~~~~~l~gh~~~v~~~ 86 (321)
T 3ow8_A 35 IWSVAWGTN---KKENSETVVTGSLDDLVKVWKWRDER-------------------------LDLQWSLEGHQLGVVSV 86 (321)
T ss_dssp EEEEEEC----------CEEEEEETTSCEEEEEEETTE-------------------------EEEEEEECCCSSCEEEE
T ss_pred EEEEEEecC---CCCCCCEEEEEcCCCCEEEEECCCCC-------------------------eeeeeeeccCCCCEEEE
Confidence 378888421 11357899999999999999986421 11223456899999999
Q ss_pred EeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeec
Q 010748 273 AWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVA 352 (502)
Q Consensus 273 ~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~ 352 (502)
+|+++ ..++++|+.|++|++||+.+++++..+..|...+.+++|+|++ .+|++|+.+|.|++|++++.........+.
T Consensus 87 ~~~~~-~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~ 164 (321)
T 3ow8_A 87 DISHT-LPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDS-QYLATGTHVGKVNIFGVESGKKEYSLDTRG 164 (321)
T ss_dssp EECSS-SSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTS-SEEEEECTTSEEEEEETTTCSEEEEEECSS
T ss_pred EECCC-CCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCC-CEEEEEcCCCcEEEEEcCCCceeEEecCCC
Confidence 99999 5699999999999999999999999999999999999999999 899999999999999999887766566677
Q ss_pred CCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEE
Q 010748 353 ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 432 (502)
Q Consensus 353 ~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vw 432 (502)
..+.+++|+|++. ++++|+.||.|++||++++ ..+..+.+|..+|++++|+|++ .+|++|+.|+.|++|
T Consensus 165 ~~v~~~~~spdg~-~lasg~~dg~i~iwd~~~~---------~~~~~~~~h~~~v~~l~~spd~-~~l~s~s~dg~i~iw 233 (321)
T 3ow8_A 165 KFILSIAYSPDGK-YLASGAIDGIINIFDIATG---------KLLHTLEGHAMPIRSLTFSPDS-QLLVTASDDGYIKIY 233 (321)
T ss_dssp SCEEEEEECTTSS-EEEEEETTSCEEEEETTTT---------EEEEEECCCSSCCCEEEECTTS-CEEEEECTTSCEEEE
T ss_pred ceEEEEEECCCCC-EEEEEcCCCeEEEEECCCC---------cEEEEEcccCCceeEEEEcCCC-CEEEEEcCCCeEEEE
Confidence 8899999999875 8999999999999999986 7788899999999999999998 899999999999999
Q ss_pred ECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccccCC
Q 010748 433 DLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKY 492 (502)
Q Consensus 433 d~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~~~~ 492 (502)
|+++.. ....+.+|...|.+++|+|++. .|++|+.|++|+|||+.+++++.....+.
T Consensus 234 d~~~~~--~~~~~~~h~~~v~~~~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~h~ 290 (321)
T 3ow8_A 234 DVQHAN--LAGTLSGHASWVLNVAFCPDDT-HFVSSSSDKSVKVWDVGTRTCVHTFFDHQ 290 (321)
T ss_dssp ETTTCC--EEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred ECCCcc--eeEEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCEEEEEEcCCC
Confidence 999887 5677889999999999999999 59999999999999999999888776654
No 18
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=8.3e-37 Score=297.14 Aligned_cols=290 Identities=18% Similarity=0.282 Sum_probs=224.3
Q ss_pred CCccccccccc-----cC-CCceEEEEEecCCcceeEEEEEecCCCCCC-----CeeeeeccccCCCcceeeeecCCCCC
Q 010748 137 EDSEDLEDMTI-----NP-NDAVIVCARNEDDVSHLEVYILEESDGGDP-----NLYVHHHIIIPAFPLCMAWLDCPLKD 205 (502)
Q Consensus 137 ~~~~~v~~~~~-----~p-~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~ 205 (502)
.|...|.++.| +| ++++|++|+.++ .++||.+........ ..+..|. ....+++|
T Consensus 19 gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~---~v~iWd~~~~~~~~~~~~~~~~l~~h~----~~V~~~~~------- 84 (343)
T 2xzm_R 19 GHSDWVTSIVAGFSQKENEDSPVLISGSRDK---TVMIWKLYEEEQNGYFGIPHKALTGHN----HFVSDLAL------- 84 (343)
T ss_dssp CCSSCEEEEEECCCSSTTCCCCEEEEEETTS---CEEEEEECSSCCSSBSEEEEEEECCCS----SCEEEEEE-------
T ss_pred cchhhhhheeeEEEeecCCCCCEEEEEcCCC---EEEEEECCcCCcccccccccchhccCC----CceEEEEE-------
Confidence 48889999999 76 899999999887 678888765432100 0111222 22356666
Q ss_pred CCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEE
Q 010748 206 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASA 285 (502)
Q Consensus 206 s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sg 285 (502)
+|++.+|++|+.|++|+|||+.++.. ...+.+|...|++++|+|+ +.+|++|
T Consensus 85 ~~~~~~l~s~s~D~~v~lwd~~~~~~---------------------------~~~~~~h~~~v~~v~~sp~-~~~l~s~ 136 (343)
T 2xzm_R 85 SQENCFAISSSWDKTLRLWDLRTGTT---------------------------YKRFVGHQSEVYSVAFSPD-NRQILSA 136 (343)
T ss_dssp CSSTTEEEEEETTSEEEEEETTSSCE---------------------------EEEEECCCSCEEEEEECSS-TTEEEEE
T ss_pred CCCCCEEEEEcCCCcEEEEECCCCcE---------------------------EEEEcCCCCcEEEEEECCC-CCEEEEE
Confidence 78999999999999999999976432 2234589999999999999 5699999
Q ss_pred ecCCcEEEEeCCCCeeeEee---ccCCCCeEEEEEcCCCC---------cEEEEEeCCCcEEEEecCCCCCccceEeecC
Q 010748 286 SADKQVKIWDVAAGKCNLTL---EHHTDKVQAVAWNHHSP---------QILLSGSFDRSVVMKDARISTHSGFKWAVAA 353 (502)
Q Consensus 286 s~dg~v~vwd~~~~~~~~~~---~~h~~~v~~l~~~~~~~---------~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~ 353 (502)
+.|++|++||+... ....+ ..|...|.+++|+|.+. .+|++++.||+|++||.+ .........|..
T Consensus 137 ~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~h~~ 214 (343)
T 2xzm_R 137 GAEREIKLWNILGE-CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKAHES 214 (343)
T ss_dssp ETTSCEEEEESSSC-EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEECCSS
T ss_pred cCCCEEEEEeccCC-ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcCccc
Confidence 99999999999844 33333 37899999999999862 589999999999999954 333334557888
Q ss_pred CeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEE
Q 010748 354 DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 433 (502)
Q Consensus 354 ~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd 433 (502)
.|.+++|+|++. +|++|+.||.|++||++.. ..+...+ .+...|.+++|+|++ .++++ +.|+.|++|+
T Consensus 215 ~v~~~~~s~~g~-~l~sgs~dg~v~iwd~~~~--------~~~~~~~-~~~~~v~~v~~sp~~-~~la~-~~d~~v~iw~ 282 (343)
T 2xzm_R 215 NVNHLSISPNGK-YIATGGKDKKLLIWDILNL--------TYPQREF-DAGSTINQIAFNPKL-QWVAV-GTDQGVKIFN 282 (343)
T ss_dssp CEEEEEECTTSS-EEEEEETTCEEEEEESSCC--------SSCSEEE-ECSSCEEEEEECSSS-CEEEE-EESSCEEEEE
T ss_pred cceEEEECCCCC-EEEEEcCCCeEEEEECCCC--------cccceee-cCCCcEEEEEECCCC-CEEEE-ECCCCEEEEE
Confidence 999999999875 8999999999999999654 1333333 355679999999987 66654 4588899999
Q ss_pred CCCCCeeEEEEec-----------CCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010748 434 LSNNQPSCIASRN-----------PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 434 ~~~~~~~~~~~~~-----------~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~ 483 (502)
+.+.+...+..+. +|...|.+++|+|++++ |++|+.||.|++|++.++.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~-l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 283 LMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKK-LFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp SSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCC-EEEEETTSEEEEEEEEEEE
T ss_pred eCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCe-EEEecCCceEEEEEEEccC
Confidence 9877644333333 67788999999999995 8999999999999987653
No 19
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.8e-38 Score=311.98 Aligned_cols=301 Identities=17% Similarity=0.281 Sum_probs=242.8
Q ss_pred CccccccccccCCCc-eEEEE----------EecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCC
Q 010748 138 DSEDLEDMTINPNDA-VIVCA----------RNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDR 206 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~-~l~~~----------~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s 206 (502)
+...|.+++|+|+++ +|++| +.++ .++||.+.............| .....|++| +
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~---~v~iw~~~~~~~~~~~~~~~~----~~~v~~~~~-------s 76 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDS---SLELWSLLAADSEKPIASLQV----DSKFNDLDW-------S 76 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCC---CCEEEESSSGGGCSCSCCCCC----SSCEEEEEE-------C
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCC---eEEEEEccCCCCCcEEEEEec----CCceEEEEE-------C
Confidence 346799999999987 88888 4444 567777765432111111122 233467877 7
Q ss_pred CCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEe
Q 010748 207 EKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS 286 (502)
Q Consensus 207 ~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs 286 (502)
|++++|++|+.||.|+||++...... ......+.+|...|++++|+|+++.+|++|+
T Consensus 77 ~~~~~l~~~~~dg~v~vw~~~~~~~~-----------------------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 133 (416)
T 2pm9_A 77 HNNKIIAGALDNGSLELYSTNEANNA-----------------------INSMARFSNHSSSVKTVKFNAKQDNVLASGG 133 (416)
T ss_dssp SSSSCEEEEESSSCEEEECCSSTTSC-----------------------CCEEEECCCSSSCCCEEEECSSSTTBEEEEC
T ss_pred CCCCeEEEEccCCeEEEeeccccccc-----------------------ccchhhccCCccceEEEEEcCCCCCEEEEEc
Confidence 89999999999999999999752110 1133345689999999999998667999999
Q ss_pred cCCcEEEEeCCCCe------eeEe---eccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEee------
Q 010748 287 ADKQVKIWDVAAGK------CNLT---LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV------ 351 (502)
Q Consensus 287 ~dg~v~vwd~~~~~------~~~~---~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~------ 351 (502)
.||.|++||+.+++ .... +..|...|.+++|+|++..+|++++.||.|++||+++.+.......+
T Consensus 134 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 213 (416)
T 2pm9_A 134 NNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGI 213 (416)
T ss_dssp SSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCC
T ss_pred CCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEecccccccc
Confidence 99999999999886 3333 36799999999999996589999999999999999987765544333
Q ss_pred cCCeeEEEeCCCCCCEEEEEeCCC---cEEEEECCCCCCCCCCCCCccceEEe-ccCCCeeEEEEcC-CCCCEEEEEeCC
Q 010748 352 AADVESLAWDPHAEHSFVVSLEDG---TIKGFDIRTAKSDPDSTSQQSSFTLH-AHDKAVCTISYNP-LVPNLLATGSTD 426 (502)
Q Consensus 352 ~~~v~~v~~~~~~~~~~~~~~~dg---~v~i~d~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~sp-~~~~~l~t~s~d 426 (502)
...+.+++|+|++..++++++.++ .|++||+++. ..++..+. +|...|++++|+| ++ .+|++++.|
T Consensus 214 ~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~--------~~~~~~~~~~~~~~v~~~~~s~~~~-~~l~s~~~d 284 (416)
T 2pm9_A 214 KQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA--------NTPLQTLNQGHQKGILSLDWCHQDE-HLLLSSGRD 284 (416)
T ss_dssp CCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST--------TSCSBCCCSCCSSCEEEEEECSSCS-SCEEEEESS
T ss_pred CCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC--------CCCcEEeecCccCceeEEEeCCCCC-CeEEEEeCC
Confidence 678999999999877999999998 9999999986 25566677 8999999999999 55 999999999
Q ss_pred CcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccc
Q 010748 427 KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 427 g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~ 486 (502)
|.|++||+.+++ .+..+..|.+.|++++|+|+++.+|++++.||.|+||++.+.....
T Consensus 285 g~v~~wd~~~~~--~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~ 342 (416)
T 2pm9_A 285 NTVLLWNPESAE--QLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTL 342 (416)
T ss_dssp SEEEEECSSSCC--EEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSS
T ss_pred CCEEEeeCCCCc--cceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCc
Confidence 999999999887 5677778999999999999994479999999999999998876543
No 20
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.5e-36 Score=300.24 Aligned_cols=300 Identities=21% Similarity=0.298 Sum_probs=232.6
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010748 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~ 216 (502)
.+...+....+.+++..+++++.++ .|++|+...+ ...............+++| +|++++|++|+
T Consensus 89 ~~~~~~~~~~~~~s~~~l~~~~~d~-----~v~lw~~~~~---~~~~~~~~~~~~~v~~v~~-------s~~~~~l~~~~ 153 (401)
T 4aez_A 89 GIIDDYYLNLLDWSNLNVVAVALER-----NVYVWNADSG---SVSALAETDESTYVASVKW-------SHDGSFLSVGL 153 (401)
T ss_dssp TCCCCTTCBCEEECTTSEEEEEETT-----EEEEEETTTC---CEEEEEECCTTCCEEEEEE-------CTTSSEEEEEE
T ss_pred CCcCCceEEEEeecCCCEEEEECCC-----eEEEeeCCCC---cEeEeeecCCCCCEEEEEE-------CCCCCEEEEEC
Confidence 4555555555555556677888777 5555555444 2221111112344578888 78999999999
Q ss_pred CCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeC
Q 010748 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV 296 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~ 296 (502)
.+|.|+||++.+... ...+.+|...|.+++|++ ++|++|+.||.|++||+
T Consensus 154 ~dg~i~iwd~~~~~~---------------------------~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~ 203 (401)
T 4aez_A 154 GNGLVDIYDVESQTK---------------------------LRTMAGHQARVGCLSWNR---HVLSSGSRSGAIHHHDV 203 (401)
T ss_dssp TTSCEEEEETTTCCE---------------------------EEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEET
T ss_pred CCCeEEEEECcCCeE---------------------------EEEecCCCCceEEEEECC---CEEEEEcCCCCEEEEec
Confidence 999999999975322 223457999999999954 49999999999999999
Q ss_pred C-CCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEEEEEe--C
Q 010748 297 A-AGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSL--E 373 (502)
Q Consensus 297 ~-~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~--~ 373 (502)
. .+..+..+.+|...|.+++|+|++ .+|++|+.||.|++||+++.........+...|.+++|+|++..++++++ .
T Consensus 204 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~ 282 (401)
T 4aez_A 204 RIANHQIGTLQGHSSEVCGLAWRSDG-LQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTM 282 (401)
T ss_dssp TSSSCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTT
T ss_pred ccCcceeeEEcCCCCCeeEEEEcCCC-CEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCC
Confidence 8 567788889999999999999988 89999999999999999987776656678899999999999888888876 7
Q ss_pred CCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEE--eCCCcEEEEECCCCCeeEEEEecCCCCc
Q 010748 374 DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMVKLWDLSNNQPSCIASRNPKAGA 451 (502)
Q Consensus 374 dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~--s~dg~i~vwd~~~~~~~~~~~~~~~~~~ 451 (502)
||.|++||++++ .++..+. |...|++++|+|++ .+|+++ +.||.|++|++.++.......+.+|.+.
T Consensus 283 d~~i~i~d~~~~---------~~~~~~~-~~~~v~~~~~s~~~-~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~ 351 (401)
T 4aez_A 283 DKQIHFWNAATG---------ARVNTVD-AGSQVTSLIWSPHS-KEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTR 351 (401)
T ss_dssp TCEEEEEETTTC---------CEEEEEE-CSSCEEEEEECSSS-SEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSC
T ss_pred CCEEEEEECCCC---------CEEEEEe-CCCcEEEEEECCCC-CeEEEEeecCCCcEEEEecCCccceeEEEecCCCCC
Confidence 999999999986 5555554 67789999999998 777774 4899999999998876667778899999
Q ss_pred EEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccccCCCC
Q 010748 452 VFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKYSK 494 (502)
Q Consensus 452 v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~~~~~~ 494 (502)
|.+++|+|++. +|++++.||.|++|++.+++.+.+.......
T Consensus 352 v~~~~~s~dg~-~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~ 393 (401)
T 4aez_A 352 VLYSALSPDGR-ILSTAASDENLKFWRVYDGDHVKRPIPITKT 393 (401)
T ss_dssp CCEEEECTTSS-EEEEECTTSEEEEEECCC-------------
T ss_pred EEEEEECCCCC-EEEEEeCCCcEEEEECCCCccccccccccCC
Confidence 99999999999 5999999999999999999988776654443
No 21
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2e-36 Score=317.40 Aligned_cols=299 Identities=15% Similarity=0.156 Sum_probs=236.9
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEe
Q 010748 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g 215 (502)
..|...|.+++|+|+|++||+|+.++ .++||............+..| .....+++| +|++++||++
T Consensus 56 ~~h~~~v~~~~~spdg~~lasg~~d~---~v~lWd~~~~~~~~~~~~~~~----~~~v~~v~f-------s~dg~~l~~~ 121 (611)
T 1nr0_A 56 TEHSHQTTVAKTSPSGYYCASGDVHG---NVRIWDTTQTTHILKTTIPVF----SGPVKDISW-------DSESKRIAAV 121 (611)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTS---EEEEEESSSTTCCEEEEEECS----SSCEEEEEE-------CTTSCEEEEE
T ss_pred cCCCCceEEEEECCCCcEEEEEeCCC---CEEEeECCCCcceeeEeeccc----CCceEEEEE-------CCCCCEEEEE
Confidence 45888999999999999999999887 566666543322000011122 223367777 8999999998
Q ss_pred cCC----CcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcE
Q 010748 216 SME----PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQV 291 (502)
Q Consensus 216 ~~d----g~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v 291 (502)
+.+ +.|++||... . ...+.+|...|++++|+|++..+|++|+.|++|
T Consensus 122 ~~~~~~~~~v~~wd~~~--~---------------------------~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v 172 (611)
T 1nr0_A 122 GEGRERFGHVFLFDTGT--S---------------------------NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTV 172 (611)
T ss_dssp ECCSSCSEEEEETTTCC--B---------------------------CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCE
T ss_pred ECCCCceeEEEEeeCCC--C---------------------------cceecCCCCCceEEEECCCCCeEEEEEeCCCeE
Confidence 865 4788887431 1 123458999999999999966679999999999
Q ss_pred EEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceE-------eecCCeeEEEeCCCC
Q 010748 292 KIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-------AVAADVESLAWDPHA 364 (502)
Q Consensus 292 ~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~v~~~~~~ 364 (502)
++||..++++..++.+|...|.+++|+|++ .+|++|+.|++|++||++++....... .|...|.+++|+|++
T Consensus 173 ~lwd~~~~~~~~~l~~H~~~V~~v~fspdg-~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg 251 (611)
T 1nr0_A 173 AIFEGPPFKFKSTFGEHTKFVHSVRYNPDG-SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG 251 (611)
T ss_dssp EEEETTTBEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTS
T ss_pred EEEECCCCeEeeeeccccCceEEEEECCCC-CEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCC
Confidence 999999999999999999999999999999 899999999999999998876544331 688899999999987
Q ss_pred CCEEEEEeCCCcEEEEECCCCCCCCCC----------------------------------CCCccceEEeccCCCeeEE
Q 010748 365 EHSFVVSLEDGTIKGFDIRTAKSDPDS----------------------------------TSQQSSFTLHAHDKAVCTI 410 (502)
Q Consensus 365 ~~~~~~~~~dg~v~i~d~~~~~~~~~~----------------------------------~~~~~~~~~~~h~~~v~~l 410 (502)
. ++++++.|++|++||++++...... ....+...+.+|...|+++
T Consensus 252 ~-~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l 330 (611)
T 1nr0_A 252 T-KIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITAL 330 (611)
T ss_dssp S-EEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred C-EEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEE
Confidence 5 8999999999999999875321000 0011234556899999999
Q ss_pred EEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEe-cCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcc
Q 010748 411 SYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASR-NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 484 (502)
Q Consensus 411 ~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~-~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~ 484 (502)
+|+|++ .+|++++.|++|++||+.++.. ...+ ..|...|.+++|++++. |++++.|+.+++|++.++..
T Consensus 331 ~~spdg-~~l~s~s~D~~v~~Wd~~~~~~--~~~~~~~h~~~v~~~~~s~~~~--l~s~s~d~~v~~w~~~~~~~ 400 (611)
T 1nr0_A 331 SSSADG-KTLFSADAEGHINSWDISTGIS--NRVFPDVHATMITGIKTTSKGD--LFTVSWDDHLKVVPAGGSGV 400 (611)
T ss_dssp EECTTS-SEEEEEETTSCEEEEETTTCCE--EECSSCSCSSCEEEEEECTTSC--EEEEETTTEEEEECSSSSSS
T ss_pred EEeCCC-CEEEEEeCCCcEEEEECCCCce--eeecccCCcceEEEEEECCCCc--EEEEEcCCceEEeecCCccc
Confidence 999998 9999999999999999998873 3333 57889999999998874 78899999999999877543
No 22
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=296.98 Aligned_cols=296 Identities=17% Similarity=0.225 Sum_probs=228.8
Q ss_pred CCccccccccccCCCceEE-EEEecCCcceeEEEEEecCCCCCCCee-eeeccccCCCcceeeeecCCCCCCCC---CCE
Q 010748 137 EDSEDLEDMTINPNDAVIV-CARNEDDVSHLEVYILEESDGGDPNLY-VHHHIIIPAFPLCMAWLDCPLKDREK---GNF 211 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~-~~~~~~~~~~l~v~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~s~~---~~~ 211 (502)
.|...|.+++|+|++..++ +|+.+.....+.||.+..... ..+. ..| .....|++| +|+ +++
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~--~~~~~~~~----~~~v~~~~~-------~~~~~~~~~ 82 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDL--KLLREIEK----AKPIKCGTF-------GATSLQQRY 82 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSE--EEEEEEEE----SSCEEEEEC-------TTCCTTTCC
T ss_pred CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcc--cceeeecc----cCcEEEEEE-------cCCCCCCce
Confidence 4888999999999996555 554411123677777765432 0111 123 333467777 565 799
Q ss_pred EEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEe------ccCCCcEEEEE
Q 010748 212 MAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAW------NKEFRNILASA 285 (502)
Q Consensus 212 la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~------~~~~~~~l~sg 285 (502)
|++|+.||.|++|++.... .....+.+|...|.+++| +|+ +.+|++|
T Consensus 83 l~~~~~dg~i~iwd~~~~~--------------------------~~~~~~~~~~~~v~~~~~~~~~~~s~~-~~~l~~~ 135 (357)
T 3i2n_A 83 LATGDFGGNLHIWNLEAPE--------------------------MPVYSVKGHKEIINAIDGIGGLGIGEG-APEIVTG 135 (357)
T ss_dssp EEEEETTSCEEEECTTSCS--------------------------SCSEEECCCSSCEEEEEEESGGGCC-C-CCEEEEE
T ss_pred EEEecCCCeEEEEeCCCCC--------------------------ccEEEEEecccceEEEeeccccccCCC-ccEEEEE
Confidence 9999999999999997543 122344579999999955 667 5699999
Q ss_pred ecCCcEEEEeCCCCe-eeEeeccCCC----CeEEEE----EcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCee
Q 010748 286 SADKQVKIWDVAAGK-CNLTLEHHTD----KVQAVA----WNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVE 356 (502)
Q Consensus 286 s~dg~v~vwd~~~~~-~~~~~~~h~~----~v~~l~----~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~ 356 (502)
+.||.|++||+.+++ ++..+..|.+ .|.++. |+|++ .+|++++.+|.|++||+++..... ...+...|.
T Consensus 136 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~v~ 213 (357)
T 3i2n_A 136 SRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEE-RVVCAGYDNGDIKLFDLRNMALRW-ETNIKNGVC 213 (357)
T ss_dssp ETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CC-CEEEEEETTSEEEEEETTTTEEEE-EEECSSCEE
T ss_pred eCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCC-CEEEEEccCCeEEEEECccCceee-ecCCCCceE
Confidence 999999999999887 6777766554 899998 67888 899999999999999999877643 567788999
Q ss_pred EEEeCC---CCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccce-----EEeccCCCeeEEEEcCCCCCEEEEEeCCCc
Q 010748 357 SLAWDP---HAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSF-----TLHAHDKAVCTISYNPLVPNLLATGSTDKM 428 (502)
Q Consensus 357 ~v~~~~---~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~-----~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~ 428 (502)
+++|+| ++. ++++++.+|.|++||+++. .+.. .+..|...|++++|+|++..+|++++.||.
T Consensus 214 ~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~---------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 283 (357)
T 3i2n_A 214 SLEFDRKDISMN-KLVATSLEGKFHVFDMRTQ---------HPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGG 283 (357)
T ss_dssp EEEESCSSSSCC-EEEEEESTTEEEEEEEEEE---------ETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSE
T ss_pred EEEcCCCCCCCC-EEEEECCCCeEEEEeCcCC---------CcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCc
Confidence 999999 554 8999999999999999876 3333 334899999999999998448999999999
Q ss_pred EEEEECCCCCe-----------------eEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcc
Q 010748 429 VKLWDLSNNQP-----------------SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 484 (502)
Q Consensus 429 i~vwd~~~~~~-----------------~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~ 484 (502)
|++||++.... ..+..+..|.+.|++++|+|++++++++++.||.|+||++.+...
T Consensus 284 i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 284 LHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp EEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred EEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 99999986432 357778889999999999999997444899999999999987654
No 23
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=7.4e-37 Score=299.05 Aligned_cols=306 Identities=15% Similarity=0.191 Sum_probs=236.0
Q ss_pred CCCccccccccccCC----CceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCE
Q 010748 136 DEDSEDLEDMTINPN----DAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNF 211 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~----~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 211 (502)
+.|...|.+++|+|+ ..++++++.++ .+.||.+..... ...+..|..........+++|.+. ..+++++
T Consensus 15 ~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~---~v~vw~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~ 87 (366)
T 3k26_A 15 EDHNQPLFGVQFNWHSKEGDPLVFATVGSN---RVTLYECHSQGE-IRLLQSYVDADADENFYTCAWTYD---SNTSHPL 87 (366)
T ss_dssp CTTCSCEEEEEECTTCCTTSCEEEEEEETT---EEEEEEECGGGC-EEEEEEEECSCTTCCEEEEEEEEC---TTTCCEE
T ss_pred cCCCCceEEEEEecccCCCCceEEEECCCC---EEEEEEcCCCcE-EEeeeeccccCCCCcEEEEEeccC---CCCCCCE
Confidence 358899999999994 55666666665 567777764432 112223332223345578888421 0122789
Q ss_pred EEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcE
Q 010748 212 MAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQV 291 (502)
Q Consensus 212 la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v 291 (502)
|++|+.||.|+|||+.+... ...+.+|...|.+++|+|..+.+|++|+.||.|
T Consensus 88 l~~~~~dg~i~v~d~~~~~~---------------------------~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i 140 (366)
T 3k26_A 88 LAVAGSRGIIRIINPITMQC---------------------------IKHYVGHGNAINELKFHPRDPNLLLSVSKDHAL 140 (366)
T ss_dssp EEEEETTCEEEEECTTTCCE---------------------------EEEEESCCSCEEEEEECSSCTTEEEEEETTSCE
T ss_pred EEEecCCCEEEEEEchhceE---------------------------eeeecCCCCcEEEEEECCCCCCEEEEEeCCCeE
Confidence 99999999999999975332 223457999999999999437799999999999
Q ss_pred EEEeCCCCeeeEee---ccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceE-------------------
Q 010748 292 KIWDVAAGKCNLTL---EHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW------------------- 349 (502)
Q Consensus 292 ~vwd~~~~~~~~~~---~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~------------------- 349 (502)
++||+.+++.+..+ ..|...|.+++|+|++ .+|++++.||.|++||+++........
T Consensus 141 ~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (366)
T 3k26_A 141 RLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLG-EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKI 219 (366)
T ss_dssp EEEETTTTEEEEEECSTTSCSSCEEEEEECTTS-SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEE
T ss_pred EEEEeecCeEEEEecccccccCceeEEEECCCC-CEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceee
Confidence 99999999999888 7899999999999998 899999999999999998754332111
Q ss_pred ---------eecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCC-----CCCCCccceEEeccCCCeeEEEEcCC
Q 010748 350 ---------AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDP-----DSTSQQSSFTLHAHDKAVCTISYNPL 415 (502)
Q Consensus 350 ---------~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~-----~~~~~~~~~~~~~h~~~v~~l~~sp~ 415 (502)
.+...|.+++|+ +.++++++.+|.|++||+++..... .......+..+..|...|++++|+|+
T Consensus 220 ~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 296 (366)
T 3k26_A 220 HFPDFSTRDIHRNYVDCVRWL---GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMD 296 (366)
T ss_dssp CCCSEEECSSCSSCCCEEEEE---TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEEC
T ss_pred ccCccccccCCcceEEEEEEc---CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCC
Confidence 177889999998 2489999999999999998763210 00011346777889999999999998
Q ss_pred --CCCEEEEEeCCCcEEEEECCCCCee--EEEEecCC--CCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010748 416 --VPNLLATGSTDKMVKLWDLSNNQPS--CIASRNPK--AGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 416 --~~~~l~t~s~dg~i~vwd~~~~~~~--~~~~~~~~--~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~ 481 (502)
+ .+|++|+.||.|++||+.++++. ....+..| ...|++++|+|+++ +|++++.||.|++||+.+
T Consensus 297 ~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 297 FWQ-KMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSS-ILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp TTS-SEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSS-EEEEEETTSEEEEEEC--
T ss_pred CCC-cEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCC-eEEEEeCCCEEEEEEecC
Confidence 7 99999999999999999987642 34455666 79999999999999 599999999999999853
No 24
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.8e-36 Score=292.06 Aligned_cols=250 Identities=21% Similarity=0.298 Sum_probs=215.8
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEE
Q 010748 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.++.| +|++++|++|+.||.|+|||+.+... ...+..|...|.+++
T Consensus 59 ~~~~~-------s~d~~~l~s~s~Dg~v~iWd~~~~~~---------------------------~~~~~~~~~~v~~~~ 104 (340)
T 1got_B 59 YAMHW-------GTDSRLLLSASQDGKLIIWDSYTTNK---------------------------VHAIPLRSSWVMTCA 104 (340)
T ss_dssp EEEEE-------CTTSSEEEEEETTTEEEEEETTTCCE---------------------------EEEEECSSSCEEEEE
T ss_pred EEEEE-------CCCCCEEEEEeCCCcEEEEECCCCCc---------------------------ceEeecCCccEEEEE
Confidence 57777 79999999999999999999875332 223346889999999
Q ss_pred eccCCCcEEEEEecCCcEEEEeCCCC----eeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceE
Q 010748 274 WNKEFRNILASASADKQVKIWDVAAG----KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW 349 (502)
Q Consensus 274 ~~~~~~~~l~sgs~dg~v~vwd~~~~----~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 349 (502)
|+|+ +.+|++|+.|+.|++|++.++ +....+.+|...|.++.|++++ .+++++.|++|++||++++.......
T Consensus 105 ~s~~-~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~~wd~~~~~~~~~~~ 181 (340)
T 1got_B 105 YAPS-GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQQTTTFT 181 (340)
T ss_dssp ECTT-SSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT--EEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred ECCC-CCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCC--cEEEEECCCcEEEEECCCCcEEEEEc
Confidence 9999 569999999999999999875 4567788999999999999887 58999999999999999888776666
Q ss_pred eecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcE
Q 010748 350 AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMV 429 (502)
Q Consensus 350 ~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i 429 (502)
.|...|.+++|+|++. ++++|+.||.|++||+++. .+...+.+|...|++++|+|++ .+|++|+.||+|
T Consensus 182 ~h~~~v~~~~~~~~~~-~l~sg~~d~~v~~wd~~~~---------~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~d~~v 250 (340)
T 1got_B 182 GHTGDVMSLSLAPDTR-LFVSGACDASAKLWDVREG---------MCRQTFTGHESDINAICFFPNG-NAFATGSDDATC 250 (340)
T ss_dssp CCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTC---------SEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCE
T ss_pred CCCCceEEEEECCCCC-EEEEEeCCCcEEEEECCCC---------eeEEEEcCCcCCEEEEEEcCCC-CEEEEEcCCCcE
Confidence 7889999999999765 8999999999999999986 6788899999999999999998 999999999999
Q ss_pred EEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccccCC
Q 010748 430 KLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKY 492 (502)
Q Consensus 430 ~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~~~~ 492 (502)
++||+++.+.........+...|.+++|+|+++ +|++|+.||.|++||+.++..+....+|.
T Consensus 251 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~d~~i~vwd~~~~~~~~~~~~h~ 312 (340)
T 1got_B 251 RLFDLRADQELMTYSHDNIICGITSVSFSKSGR-LLLAGYDDFNCNVWDALKADRAGVLAGHD 312 (340)
T ss_dssp EEEETTTTEEEEEECCTTCCSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred EEEECCCCcEEEEEccCCcccceEEEEECCCCC-EEEEECCCCeEEEEEcccCcEeeEeecCC
Confidence 999999887544444444556899999999999 59999999999999999988776655543
No 25
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.5e-35 Score=284.73 Aligned_cols=288 Identities=16% Similarity=0.293 Sum_probs=236.1
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010748 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~ 216 (502)
.|...|.++.|+|++++|++++ ++ .+.+|.+....... .+.............++.| +|++++|++|+
T Consensus 49 ~h~~~v~~~~~~~~~~~l~~~~-dg---~i~iw~~~~~~~~~-~~~~~~~~~~~~~v~~~~~-------~~~~~~l~~~~ 116 (337)
T 1gxr_A 49 NHGEVVCAVTISNPTRHVYTGG-KG---CVKVWDISHPGNKS-PVSQLDCLNRDNYIRSCKL-------LPDGCTLIVGG 116 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEEC-BS---EEEEEETTSTTCCS-CSEEEECSCTTSBEEEEEE-------CTTSSEEEEEE
T ss_pred cCCCceEEEEEecCCcEEEEcC-CC---eEEEEECCCCCcee-eeecccccCCCCcEEEEEE-------cCCCCEEEEEc
Confidence 4788999999999999999998 65 56666655433211 1111110112233467777 78999999999
Q ss_pred CCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeC
Q 010748 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV 296 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~ 296 (502)
.+|.|++|++..... .....+..|...|.+++|+|+ +.+|++++.||.|++||+
T Consensus 117 ~d~~i~~~d~~~~~~-------------------------~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~v~~~d~ 170 (337)
T 1gxr_A 117 EASTLSIWDLAAPTP-------------------------RIKAELTSSAPACYALAISPD-SKVCFSCCSDGNIAVWDL 170 (337)
T ss_dssp SSSEEEEEECCCC---------------------------EEEEEEECSSSCEEEEEECTT-SSEEEEEETTSCEEEEET
T ss_pred CCCcEEEEECCCCCc-------------------------ceeeecccCCCceEEEEECCC-CCEEEEEeCCCcEEEEeC
Confidence 999999999975321 122344578899999999998 669999999999999999
Q ss_pred CCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEEEEEeCCCc
Q 010748 297 AAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGT 376 (502)
Q Consensus 297 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~ 376 (502)
.+++.+..+..|...|.+++|+|++ .+|++++.||.|++||+++.+... ...+...+.+++|+|++. ++++++.+|.
T Consensus 171 ~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~~~-~~~~~~~v~~~~~s~~~~-~l~~~~~~~~ 247 (337)
T 1gxr_A 171 HNQTLVRQFQGHTDGASCIDISNDG-TKLWTGGLDNTVRSWDLREGRQLQ-QHDFTSQIFSLGYCPTGE-WLAVGMESSN 247 (337)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEECTTSS-EEEEEETTSC
T ss_pred CCCceeeeeecccCceEEEEECCCC-CEEEEEecCCcEEEEECCCCceEe-eecCCCceEEEEECCCCC-EEEEEcCCCc
Confidence 9999999999999999999999998 899999999999999999876554 456788899999999865 8999999999
Q ss_pred EEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCcEEEEE
Q 010748 377 IKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVA 456 (502)
Q Consensus 377 v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~ 456 (502)
|++||+++. ....+..|...|.+++|+|++ .+|++++.||.|++|++.+++.. . ...|...|.+++
T Consensus 248 i~~~~~~~~----------~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~~--~-~~~~~~~v~~~~ 313 (337)
T 1gxr_A 248 VEVLHVNKP----------DKYQLHLHESCVLSLKFAYCG-KWFVSTGKDNLLNAWRTPYGASI--F-QSKESSSVLSCD 313 (337)
T ss_dssp EEEEETTSS----------CEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEE--E-EEECSSCEEEEE
T ss_pred EEEEECCCC----------CeEEEcCCccceeEEEECCCC-CEEEEecCCCcEEEEECCCCeEE--E-EecCCCcEEEEE
Confidence 999999875 245678899999999999998 89999999999999999998743 2 234678899999
Q ss_pred EcCCCCcEEEEEeCCCcEEEEECC
Q 010748 457 FSEDSPFVLAIGGSKGKLEIWDTL 480 (502)
Q Consensus 457 ~spd~~~ll~sg~~dg~i~vwd~~ 480 (502)
|+|+++ .|++++.||.|++|++.
T Consensus 314 ~s~~~~-~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 314 ISVDDK-YIVTGSGDKKATVYEVI 336 (337)
T ss_dssp ECTTSC-EEEEEETTSCEEEEEEE
T ss_pred ECCCCC-EEEEecCCCeEEEEEEe
Confidence 999999 58899999999999973
No 26
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.4e-37 Score=304.89 Aligned_cols=304 Identities=19% Similarity=0.279 Sum_probs=240.8
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCe--eeeeccccCCCcceeeeecCCCCCCCC-CCEEE
Q 010748 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNL--YVHHHIIIPAFPLCMAWLDCPLKDREK-GNFMA 213 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~la 213 (502)
.|...|.+++|+|++++|++|+.++ .+.+|.+.........+ +..| .....+++| +|+ +++|+
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg---~v~vw~~~~~~~~~~~~~~~~~h----~~~v~~~~~-------~~~~~~~l~ 130 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNG---SLELYSTNEANNAINSMARFSNH----SSSVKTVKF-------NAKQDNVLA 130 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSS---CEEEECCSSTTSCCCEEEECCCS----SSCCCEEEE-------CSSSTTBEE
T ss_pred ecCCceEEEEECCCCCeEEEEccCC---eEEEeecccccccccchhhccCC----ccceEEEEE-------cCCCCCEEE
Confidence 4778899999999999999999886 56777665522111011 1222 233467777 677 89999
Q ss_pred EecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEE
Q 010748 214 VGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKI 293 (502)
Q Consensus 214 ~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~v 293 (502)
+|+.||.|++||+.......... ..........|...|.+++|+|+++.+|++|+.||.|++
T Consensus 131 s~~~dg~v~iwd~~~~~~~~~~~------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~i 192 (416)
T 2pm9_A 131 SGGNNGEIFIWDMNKCTESPSNY------------------TPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASI 192 (416)
T ss_dssp EECSSSCEEBCBTTTTSSCTTTC------------------CCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEE
T ss_pred EEcCCCeEEEEECCCCccccccc------------------cccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEE
Confidence 99999999999998654111000 001112335799999999999997789999999999999
Q ss_pred EeCCCCeeeEeeccC------CCCeEEEEEcCCCCcEEEEEeCCC---cEEEEecCCCC-CccceE-eecCCeeEEEeCC
Q 010748 294 WDVAAGKCNLTLEHH------TDKVQAVAWNHHSPQILLSGSFDR---SVVMKDARIST-HSGFKW-AVAADVESLAWDP 362 (502)
Q Consensus 294 wd~~~~~~~~~~~~h------~~~v~~l~~~~~~~~~l~s~s~dg---~i~iwd~~~~~-~~~~~~-~~~~~v~~v~~~~ 362 (502)
||+.+++++..+..| ...|.+++|+|++..+|++++.++ .|++||+++.. ...... .|...|.+++|+|
T Consensus 193 wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~ 272 (416)
T 2pm9_A 193 WDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCH 272 (416)
T ss_dssp EETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECS
T ss_pred EECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCC
Confidence 999999999988776 789999999999878999999999 99999999864 444444 6889999999999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEE
Q 010748 363 HAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCI 442 (502)
Q Consensus 363 ~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~ 442 (502)
.+..++++++.||.|++||+++. .++..+..|...|++++|+|+++.+|++++.|+.|++|++.+......
T Consensus 273 ~~~~~l~s~~~dg~v~~wd~~~~---------~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~ 343 (416)
T 2pm9_A 273 QDEHLLLSSGRDNTVLLWNPESA---------EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLD 343 (416)
T ss_dssp SCSSCEEEEESSSEEEEECSSSC---------CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSC
T ss_pred CCCCeEEEEeCCCCEEEeeCCCC---------ccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcc
Confidence 44568999999999999999986 778889999999999999999878999999999999999987642111
Q ss_pred ---------------EEe------------------cCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCC
Q 010748 443 ---------------ASR------------------NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 443 ---------------~~~------------------~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~ 482 (502)
... ..|..++.+++|+|+|+ +|++|+.||.|+||++.+.
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 344 EQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGK-LVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp C----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTE-EECBCTTSSCBCCBCCCCC
T ss_pred cccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCe-EEEEeCCCCeEEEEEeccC
Confidence 000 11566788999999999 5999999999999999864
No 27
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.4e-36 Score=312.67 Aligned_cols=278 Identities=24% Similarity=0.381 Sum_probs=231.3
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEe
Q 010748 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g 215 (502)
..|...|.+++|+|++++|++++.++ .+++|..+.... ..+.. | .....+++| +|++++|++|
T Consensus 300 ~~h~~~v~~~~~~~~~~~l~t~~~d~---~i~~w~~~~~~~--~~~~~-~----~~~v~~~~~-------s~~g~~l~~~ 362 (577)
T 2ymu_A 300 TGHSSSVWGVAFSPDGQTIASASDDK---TVKLWNRNGQHL--QTLTG-H----SSSVWGVAF-------SPDGQTIASA 362 (577)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTS---CEEEEETTSCEE--EEECC-C----SSCEEEEEE-------CTTSSEEEEE
T ss_pred ecCCCCeEEEEECCCCCEEEEEeCCC---eEEEEeCCCCee--EEEeC-C----CCCEEEEEE-------CCCCCEEEEE
Confidence 35778999999999999999999876 566665432211 11111 2 222355655 7999999999
Q ss_pred cCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEe
Q 010748 216 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWD 295 (502)
Q Consensus 216 ~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd 295 (502)
+.+|.|++|+... .....+.+|...|.+++|+|+ +.+|++|+.|+.|++||
T Consensus 363 ~~dg~v~~~~~~~----------------------------~~~~~~~~~~~~v~~~~~s~d-g~~l~~~~~d~~v~~~~ 413 (577)
T 2ymu_A 363 SDDKTVKLWNRNG----------------------------QLLQTLTGHSSSVRGVAFSPD-GQTIASASDDKTVKLWN 413 (577)
T ss_dssp ETTSEEEEEETTC----------------------------CEEEEEECCSSCEEEEEECTT-SSCEEEEETTSEEEEEC
T ss_pred eCCCEEEEEcCCC----------------------------CEEEEecCCCCCeEEEEECCC-CCEEEEEeCCCEEEEEe
Confidence 9999999999642 122234579999999999999 56899999999999999
Q ss_pred CCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEEEEEeCCC
Q 010748 296 VAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDG 375 (502)
Q Consensus 296 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg 375 (502)
. +++.+..+.+|...|++++|+|++ .+|++++.|++|++|+... +.......|...|.+++|+|++. ++++++.|+
T Consensus 414 ~-~~~~~~~~~~~~~~v~~~~~s~d~-~~l~~~~~d~~v~~w~~~~-~~~~~~~~~~~~v~~~~~spd~~-~las~~~d~ 489 (577)
T 2ymu_A 414 R-NGQLLQTLTGHSSSVWGVAFSPDD-QTIASASDDKTVKLWNRNG-QLLQTLTGHSSSVRGVAFSPDGQ-TIASASDDK 489 (577)
T ss_dssp T-TCCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTS-CEEEEEECCSSCEEEEEECTTSC-EEEEEETTS
T ss_pred C-CCCEEEEecCCCCCeEEEEECCCC-CEEEEEcCCCEEEEEECCC-CEEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCC
Confidence 5 578888999999999999999999 8999999999999999753 44444667889999999999876 899999999
Q ss_pred cEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCcEEEE
Q 010748 376 TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSV 455 (502)
Q Consensus 376 ~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~ 455 (502)
.|++||.. + ..+..+.+|...|++++|+|++ .+|++++.||.|+|||.. ++ ++..+.+|.+.|+++
T Consensus 490 ~i~iw~~~-~---------~~~~~~~~h~~~v~~l~~s~dg-~~l~s~~~dg~v~lwd~~-~~--~~~~~~~h~~~v~~~ 555 (577)
T 2ymu_A 490 TVKLWNRN-G---------QLLQTLTGHSSSVRGVAFSPDG-QTIASASDDKTVKLWNRN-GQ--LLQTLTGHSSSVWGV 555 (577)
T ss_dssp EEEEEETT-S---------CEEEEEECCSSCEEEEEECTTS-SCEEEEETTSEEEEECTT-SC--EEEEEECCSSCEEEE
T ss_pred EEEEEcCC-C---------CEEEEEeCCCCCEEEEEEcCCC-CEEEEEECcCEEEEEeCC-CC--EEEEEcCCCCCEEEE
Confidence 99999964 2 6788899999999999999998 899999999999999964 44 567788999999999
Q ss_pred EEcCCCCcEEEEEeCCCcEEEEE
Q 010748 456 AFSEDSPFVLAIGGSKGKLEIWD 478 (502)
Q Consensus 456 ~~spd~~~ll~sg~~dg~i~vwd 478 (502)
+|+|++++ |++++.|++|++||
T Consensus 556 ~fs~dg~~-l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 556 AFSPDGQT-IASASSDKTVKLWN 577 (577)
T ss_dssp EECTTSSC-EEEEETTSCEEEEC
T ss_pred EEcCCCCE-EEEEeCCCEEEEeC
Confidence 99999996 88999999999997
No 28
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.3e-36 Score=297.29 Aligned_cols=252 Identities=19% Similarity=0.216 Sum_probs=203.4
Q ss_pred ceeeeecCCCCCCCCCCEEEEecC------CCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCccc
Q 010748 194 LCMAWLDCPLKDREKGNFMAVGSM------EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTD 267 (502)
Q Consensus 194 ~~~~~~~~~~~~s~~~~~la~g~~------dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 267 (502)
.|++| +|||++||+|+. |+.|++|+...+.... .......+|..
T Consensus 46 ~~v~f-------SpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~-----------------------~~~~~~~~~~~ 95 (357)
T 4g56_B 46 GAVRY-------RRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNE-----------------------SLCTAGVQTEA 95 (357)
T ss_dssp EEEEE-------CSSSCEEEEEECSSSSSCCEEEEEESSCC---CG-----------------------GGCSEEEECSS
T ss_pred EEEEE-------CCCCCEEEEEcCCCCccccCeEEEEECCCCCcce-----------------------eEecccCCCCC
Confidence 56666 899999999997 6788899876543221 12223346889
Q ss_pred ceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeE----eeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCC
Q 010748 268 SVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNL----TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST 343 (502)
Q Consensus 268 ~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~----~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~ 343 (502)
.|++++|+|+ + .+++++.||+|+|||+.+++... ...+|...|++++|+|++ ++|++|+.|++|++||+++++
T Consensus 96 ~V~~~~~s~d-~-~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~sgs~dg~v~iwd~~~~~ 172 (357)
T 4g56_B 96 GVTDVAWVSE-K-GILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDG-TQAVSGGKDFSVKVWDLSQKA 172 (357)
T ss_dssp CEEEEEEETT-T-EEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTTE
T ss_pred CEEEEEEcCC-C-CEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCc
Confidence 9999999998 4 56678899999999999886543 334799999999999999 899999999999999999988
Q ss_pred CccceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEE
Q 010748 344 HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG 423 (502)
Q Consensus 344 ~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~ 423 (502)
....+..|...|.+++|+|++..++++++.||.|++||++++.. ........|...+++++|+|+++.+|++|
T Consensus 173 ~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~-------~~~~~~~~~~~~v~~v~~sp~~~~~la~g 245 (357)
T 4g56_B 173 VLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKP-------ATRIDFCASDTIPTSVTWHPEKDDTFACG 245 (357)
T ss_dssp EEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSC-------BCBCCCTTCCSCEEEEEECTTSTTEEEEE
T ss_pred EEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCce-------eeeeeeccccccccchhhhhcccceEEEe
Confidence 77766778899999999998877899999999999999998732 22333456778899999999877899999
Q ss_pred eCCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccc
Q 010748 424 STDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 487 (502)
Q Consensus 424 s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~ 487 (502)
+.|+.|++||+++++ ++..+.+|...|++++|+|++..+|++|+.||+|+|||+.+++.++.
T Consensus 246 ~~d~~i~~wd~~~~~--~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~ 307 (357)
T 4g56_B 246 DETGNVSLVNIKNPD--SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRD 307 (357)
T ss_dssp ESSSCEEEEESSCGG--GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEE
T ss_pred ecccceeEEECCCCc--EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEE
Confidence 999999999999887 56677889999999999999865699999999999999999877653
No 29
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=7.2e-36 Score=290.08 Aligned_cols=251 Identities=18% Similarity=0.228 Sum_probs=203.2
Q ss_pred CccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC
Q 010748 138 DSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM 217 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~ 217 (502)
++..|.+++|+|++ .|++|+.++ .++||.++..... ...............|++| +|+|++||+|+.
T Consensus 81 ~~~~v~~~~~s~d~-~l~~~s~dg---~v~lWd~~~~~~~--~~~~~~~~~H~~~V~~v~~-------spdg~~l~sgs~ 147 (344)
T 4gqb_B 81 TEAGVADLTWVGER-GILVASDSG---AVELWELDENETL--IVSKFCKYEHDDIVSTVSV-------LSSGTQAVSGSK 147 (344)
T ss_dssp ESSCEEEEEEETTT-EEEEEETTS---EEEEEEECTTSSC--EEEEEEEECCSSCEEEEEE-------CTTSSEEEEEET
T ss_pred cCCCEEEEEEeCCC-eEEEEECCC---EEEEEeccCCCce--eEeeccccCCCCCEEEEEE-------CCCCCEEEEEeC
Confidence 44679999999986 566777776 6788877665431 1111100011223367777 799999999999
Q ss_pred CCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeCC
Q 010748 218 EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVA 297 (502)
Q Consensus 218 dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~ 297 (502)
|++|+|||+.++. ....+.+|...|++++|++++..+|++|+.|++|++||++
T Consensus 148 d~~i~iwd~~~~~---------------------------~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~ 200 (344)
T 4gqb_B 148 DICIKVWDLAQQV---------------------------VLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTR 200 (344)
T ss_dssp TSCEEEEETTTTE---------------------------EEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred CCeEEEEECCCCc---------------------------EEEEEcCcCCceEEEEecCCCCCceeeecccccccccccc
Confidence 9999999997532 2334568999999999999977899999999999999999
Q ss_pred CCeeeEeec--cCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEEEEEeCCC
Q 010748 298 AGKCNLTLE--HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDG 375 (502)
Q Consensus 298 ~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg 375 (502)
++++...+. .|...+++++|+|.+.++|++|+.||+|++||+++.+....+..|...|++++|+|++..+|++|+.||
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~ 280 (344)
T 4gqb_B 201 CPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDC 280 (344)
T ss_dssp SSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTS
T ss_pred ccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCC
Confidence 999888774 456689999999988789999999999999999999888877889999999999999877899999999
Q ss_pred cEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCC
Q 010748 376 TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 438 (502)
Q Consensus 376 ~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~ 438 (502)
+|++||++++ .+..+.+|...|++++|+|++..+|++|+.|++|++|++.+..
T Consensus 281 ~i~vwd~~~~----------~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 281 SLAVLDSSLS----------ELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp CEEEECTTCC----------EEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred eEEEEECCCC----------cEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 9999999875 3456789999999999999987789999999999999998753
No 30
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.6e-35 Score=281.96 Aligned_cols=249 Identities=23% Similarity=0.333 Sum_probs=203.1
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEE
Q 010748 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.+++| +|+|++||+|+.|+.|+||++.... ......+.+|..+|++++
T Consensus 13 ~~~~~-------s~~g~~las~s~D~~v~iw~~~~~~-------------------------~~~~~~l~gH~~~V~~v~ 60 (297)
T 2pm7_B 13 HDAVM-------DYYGKRMATCSSDKTIKIFEVEGET-------------------------HKLIDTLTGHEGPVWRVD 60 (297)
T ss_dssp EEEEE-------CTTSSEEEEEETTSCEEEEEBCSSC-------------------------BCCCEEECCCSSCEEEEE
T ss_pred EEEEE-------CCCCCEEEEEeCCCEEEEEecCCCC-------------------------cEEEEEEccccCCeEEEE
Confidence 56666 8999999999999999999986321 122335568999999999
Q ss_pred eccC-CCcEEEEEecCCcEEEEeCCCCe--eeEeeccCCCCeEEEEEcCC--CCcEEEEEeCCCcEEEEecCCCCC--cc
Q 010748 274 WNKE-FRNILASASADKQVKIWDVAAGK--CNLTLEHHTDKVQAVAWNHH--SPQILLSGSFDRSVVMKDARISTH--SG 346 (502)
Q Consensus 274 ~~~~-~~~~l~sgs~dg~v~vwd~~~~~--~~~~~~~h~~~v~~l~~~~~--~~~~l~s~s~dg~i~iwd~~~~~~--~~ 346 (502)
|++. .+.+|++|+.|++|+|||+.+++ .+..+.+|...|.+++|+|+ + .+|++++.|++|++||++.... ..
T Consensus 61 ~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g-~~l~s~s~d~~v~~wd~~~~~~~~~~ 139 (297)
T 2pm7_B 61 WAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG-PMLLVASSDGKVSVVEFKENGTTSPI 139 (297)
T ss_dssp ECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEEBCSSSCBCCE
T ss_pred ecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCC-cEEEEEECCCcEEEEEecCCCceeee
Confidence 9863 25699999999999999998874 56677889999999999997 5 7999999999999999987642 23
Q ss_pred ceEeecCCeeEEEeCCCC------------CCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcC
Q 010748 347 FKWAVAADVESLAWDPHA------------EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNP 414 (502)
Q Consensus 347 ~~~~~~~~v~~v~~~~~~------------~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp 414 (502)
....|...|.+++|+|+. ..+|++|+.|+.|++||+++.... ......+.+|...|.+++|+|
T Consensus 140 ~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~-----~~~~~~l~~H~~~V~~v~~sp 214 (297)
T 2pm7_B 140 IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT-----YVLESTLEGHSDWVRDVAWSP 214 (297)
T ss_dssp EEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTE-----EEEEEEECCCSSCEEEEEECC
T ss_pred eeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCce-----EEEEEEecCCCCceEEEEECC
Confidence 345678899999999963 358999999999999999875210 124567889999999999999
Q ss_pred CC--CCEEEEEeCCCcEEEEECCCCCe-eEEEEe--cCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010748 415 LV--PNLLATGSTDKMVKLWDLSNNQP-SCIASR--NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 415 ~~--~~~l~t~s~dg~i~vwd~~~~~~-~~~~~~--~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~ 481 (502)
++ +.+|++++.|++|+|||+..... .....+ ..|...|.+++|+|++++ ||+++.||.|+||+...
T Consensus 215 ~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 215 TVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNV-LALSGGDNKVTLWKENL 285 (297)
T ss_dssp CCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCC-EEEEETTSCEEEEEECT
T ss_pred CCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCE-EEEEcCCCcEEEEEECC
Confidence 84 47999999999999999987431 112222 567889999999999995 99999999999999863
No 31
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4e-36 Score=300.21 Aligned_cols=286 Identities=16% Similarity=0.171 Sum_probs=222.0
Q ss_pred cccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCC
Q 010748 140 EDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEP 219 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~dg 219 (502)
..+.+++|+|++++|++|+.++ .+.+|.+..... ......| . ..++.+ +++++++||+|+.+|
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~---~v~i~d~~~~~~--~~~~~~~-----~-~~~~~~------~~~~~~~l~~~~~dg 119 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDG---HDFLFNTIIRDG--SKMLKRA-----D-YTAVDT------AKLQMRRFILGTTEG 119 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETT---EEEEEECCSEET--TTTSCSC-----C-EEEEEE------ECSSSCEEEEEETTS
T ss_pred ccccceeeeecCCeEEEEEcCC---cEEEEEecccce--eeEEecC-----C-ceEEEE------EecCCCEEEEEECCC
Confidence 4467899999999999999987 445554443322 1111112 1 122222 278999999999999
Q ss_pred cEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeCCCC
Q 010748 220 AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG 299 (502)
Q Consensus 220 ~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~ 299 (502)
.|+|||+.... ....+.+|...|++++|+|+ +.+|++|+.|++|++||+.++
T Consensus 120 ~i~iwd~~~~~---------------------------~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~d~~i~iwd~~~~ 171 (420)
T 3vl1_A 120 DIKVLDSNFNL---------------------------QREIDQAHVSEITKLKFFPS-GEALISSSQDMQLKIWSVKDG 171 (420)
T ss_dssp CEEEECTTSCE---------------------------EEEETTSSSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTC
T ss_pred CEEEEeCCCcc---------------------------eeeecccccCccEEEEECCC-CCEEEEEeCCCeEEEEeCCCC
Confidence 99999987422 22244589999999999999 569999999999999999999
Q ss_pred eeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEe---ec---------------------CCe
Q 010748 300 KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA---VA---------------------ADV 355 (502)
Q Consensus 300 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~---~~---------------------~~v 355 (502)
+++..+.+|...|++++|+|++ .+|++++.||+|++||+++++....... +. ..+
T Consensus 172 ~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v 250 (420)
T 3vl1_A 172 SNPRTLIGHRATVTDIAIIDRG-RNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKK 250 (420)
T ss_dssp CCCEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCC
T ss_pred cCceEEcCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcc
Confidence 9999999999999999999998 8999999999999999998765543322 22 445
Q ss_pred eEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEE-eccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEEC
Q 010748 356 ESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 434 (502)
Q Consensus 356 ~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~ 434 (502)
.+++|+|++. ++++|+.+|.|++||+++. ..+..+ ..|...|++++|+|++..+|++|+.||.|++||+
T Consensus 251 ~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~ 320 (420)
T 3vl1_A 251 NNLEFGTYGK-YVIAGHVSGVITVHNVFSK---------EQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDL 320 (420)
T ss_dssp CTTCSSCTTE-EEEEEETTSCEEEEETTTC---------CEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred cceEEcCCCC-EEEEEcCCCeEEEEECCCC---------ceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEc
Confidence 5556678654 8999999999999999987 344444 5688999999999998449999999999999999
Q ss_pred CCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010748 435 SNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 435 ~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~ 483 (502)
++++.........|...|.++.|. ++. +|++++.||.|++|++....
T Consensus 321 ~~~~~~~~~~~~~~~~~v~~~~~~-~~~-~l~s~~~d~~v~iw~~~~~~ 367 (420)
T 3vl1_A 321 RSPECPVGEFLINEGTPINNVYFA-AGA-LFVSSGFDTSIKLDIISDPE 367 (420)
T ss_dssp TCTTSCSEEEEESTTSCEEEEEEE-TTE-EEEEETTTEEEEEEEECCTT
T ss_pred CCCcCchhhhhccCCCCceEEEeC-CCC-EEEEecCCccEEEEeccCCC
Confidence 987532222223367788888665 666 59999999999999998743
No 32
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.8e-35 Score=287.55 Aligned_cols=252 Identities=21% Similarity=0.313 Sum_probs=216.4
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEE
Q 010748 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.|++| +|++++||+|+.||+|+|||..+... ...+..|...|.+++
T Consensus 68 ~~~~~-------s~d~~~l~s~s~Dg~v~vWd~~~~~~---------------------------~~~~~~~~~~v~~~~ 113 (354)
T 2pbi_B 68 LCMDW-------CKDKRRIVSSSQDGKVIVWDSFTTNK---------------------------EHAVTMPCTWVMACA 113 (354)
T ss_dssp EEEEE-------CTTSSEEEEEETTSEEEEEETTTCCE---------------------------EEEEECSSSCCCEEE
T ss_pred EEEEE-------CCCCCEEEEEeCCCeEEEEECCCCCc---------------------------ceEEecCCCCEEEEE
Confidence 68887 78999999999999999999865322 122345788999999
Q ss_pred eccCCCcEEEEEecCCcEEEEeCCCC------eeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccc
Q 010748 274 WNKEFRNILASASADKQVKIWDVAAG------KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF 347 (502)
Q Consensus 274 ~~~~~~~~l~sgs~dg~v~vwd~~~~------~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~ 347 (502)
|+|+ +.+|++|+.|+.+++|++... .....+.+|...|.++.|+|++ ..|++++.|++|++||+++++....
T Consensus 114 ~sp~-g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~t~s~D~~v~lwd~~~~~~~~~ 191 (354)
T 2pbi_B 114 YAPS-GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSD-MQILTASGDGTCALWDVESGQLLQS 191 (354)
T ss_dssp ECTT-SSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ECCC-CCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCC-CEEEEEeCCCcEEEEeCCCCeEEEE
Confidence 9999 569999999999999998643 3456677899999999999998 8999999999999999999887776
Q ss_pred eEeecCCeeEEEeCCCC-CCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCC
Q 010748 348 KWAVAADVESLAWDPHA-EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD 426 (502)
Q Consensus 348 ~~~~~~~v~~v~~~~~~-~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~d 426 (502)
...|...|.+++|+|.. ..+|++|+.||.|++||++++ .++..+..|...|++++|+|++ .+|++|+.|
T Consensus 192 ~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~---------~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~D 261 (354)
T 2pbi_B 192 FHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSG---------QCVQAFETHESDVNSVRYYPSG-DAFASGSDD 261 (354)
T ss_dssp EECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTC---------CEEEEECCCSSCEEEEEECTTS-SEEEEEETT
T ss_pred EcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCC---------cEEEEecCCCCCeEEEEEeCCC-CEEEEEeCC
Confidence 77889999999998853 358999999999999999986 6788889999999999999998 899999999
Q ss_pred CcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccccCC
Q 010748 427 KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKY 492 (502)
Q Consensus 427 g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~~~~ 492 (502)
++|++||++..+.........+...+.+++|+|++. +|++|+.|+.|+|||+.++..+....+|.
T Consensus 262 ~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~~g~~d~~i~vwd~~~~~~~~~l~~h~ 326 (354)
T 2pbi_B 262 ATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGR-LLFAGYNDYTINVWDVLKGSRVSILFGHE 326 (354)
T ss_dssp SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCSEEEEECCCS
T ss_pred CeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCC-EEEEEECCCcEEEEECCCCceEEEEECCC
Confidence 999999999887544444444556799999999999 59999999999999999998877665554
No 33
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.9e-36 Score=297.33 Aligned_cols=289 Identities=16% Similarity=0.281 Sum_probs=236.6
Q ss_pred CccccccccccCCCc-eEEEEEecCCcceeEEEEE----ecCCCC----CCCeeeeeccc-------cCCCcceeeeecC
Q 010748 138 DSEDLEDMTINPNDA-VIVCARNEDDVSHLEVYIL----EESDGG----DPNLYVHHHII-------IPAFPLCMAWLDC 201 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~-~l~~~~~~~~~~~l~v~~~----~~~~~~----~~~l~~~~~~~-------~~~~~~~~~~~~~ 201 (502)
|...|.+++|+|+++ +|++|+.++ .+.||.+ ...... ......+ ... ......|++|
T Consensus 44 ~~~~v~~~~~s~~~~~~l~~~~~dg---~i~iw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~--- 116 (425)
T 1r5m_A 44 KLDNIVSSTWNPLDESILAYGEKNS---VARLARIVETDQEGKKYWKLTIIAELRH-PFALSASSGKTTNQVTCLAW--- 116 (425)
T ss_dssp ECSCCSEEEECSSCTTEEEEEETBT---EEEEEEEEEC------CEEEEEEEEEEC-CCCCC------CBCEEEEEE---
T ss_pred ccCceEEEEECCCCCcEEEEecCCc---eEEEEEEecccCCccccccccccccccc-cccccccccCCCCceEEEEE---
Confidence 557899999999999 999999876 6677777 433200 0011111 000 1223467777
Q ss_pred CCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcE
Q 010748 202 PLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNI 281 (502)
Q Consensus 202 ~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~ 281 (502)
+|++++|++|+.+|.|++|+.. ......+.+|...|.+++|+|+ +.+
T Consensus 117 ----s~~~~~l~~~~~dg~i~i~~~~----------------------------~~~~~~~~~~~~~v~~~~~~~~-~~~ 163 (425)
T 1r5m_A 117 ----SHDGNSIVTGVENGELRLWNKT----------------------------GALLNVLNFHRAPIVSVKWNKD-GTH 163 (425)
T ss_dssp ----CTTSSEEEEEETTSCEEEEETT----------------------------SCEEEEECCCCSCEEEEEECTT-SSE
T ss_pred ----cCCCCEEEEEeCCCeEEEEeCC----------------------------CCeeeeccCCCccEEEEEECCC-CCE
Confidence 7899999999999999999943 1222344579999999999999 569
Q ss_pred EEEEecCCcEEEEeCCCCeeeEeeccCCCC---------------eEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCcc
Q 010748 282 LASASADKQVKIWDVAAGKCNLTLEHHTDK---------------VQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG 346 (502)
Q Consensus 282 l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~---------------v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~ 346 (502)
|++++.|+.|++||+.+++.+..+..+... +.++.|+|++ .+++++.+|.|++||+++.....
T Consensus 164 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~i~~~d~~~~~~~~ 241 (425)
T 1r5m_A 164 IISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD--KFVIPGPKGAIFVYQITEKTPTG 241 (425)
T ss_dssp EEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETT--EEEEECGGGCEEEEETTCSSCSE
T ss_pred EEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCC--EEEEEcCCCeEEEEEcCCCceee
Confidence 999999999999999999999999888777 9999999976 68999999999999999987776
Q ss_pred ceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCC
Q 010748 347 FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD 426 (502)
Q Consensus 347 ~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~d 426 (502)
....+...|.+++|+|++. ++++++.+|.|++||+++. ..+..+..|...|.+++|+|++ +|++++.|
T Consensus 242 ~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~---------~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d 309 (425)
T 1r5m_A 242 KLIGHHGPISVLEFNDTNK-LLLSASDDGTLRIWHGGNG---------NSQNCFYGHSQSIVSASWVGDD--KVISCSMD 309 (425)
T ss_dssp EECCCSSCEEEEEEETTTT-EEEEEETTSCEEEECSSSB---------SCSEEECCCSSCEEEEEEETTT--EEEEEETT
T ss_pred eeccCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCC---------ccceEecCCCccEEEEEECCCC--EEEEEeCC
Confidence 6667889999999999865 8999999999999999986 6778888899999999999976 99999999
Q ss_pred CcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010748 427 KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 427 g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~ 483 (502)
+.|++||+.+++ .+..+..|...|.+++|+|++. +|++++.+|.|++|++.++.
T Consensus 310 ~~i~i~d~~~~~--~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 310 GSVRLWSLKQNT--LLALSIVDGVPIFAGRISQDGQ-KYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp SEEEEEETTTTE--EEEEEECTTCCEEEEEECTTSS-EEEEEETTSCEEEEECHHHH
T ss_pred CcEEEEECCCCc--EeEecccCCccEEEEEEcCCCC-EEEEEECCCeEEEEECCCCc
Confidence 999999999887 5666778889999999999999 58999999999999998877
No 34
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=8.8e-36 Score=295.33 Aligned_cols=293 Identities=14% Similarity=0.183 Sum_probs=232.6
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCC----CCCeeeeeccccCCCcceeeeecCCCCCCCC---
Q 010748 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGG----DPNLYVHHHIIIPAFPLCMAWLDCPLKDREK--- 208 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~--- 208 (502)
..|...|.+++|+| ++|++|+.++ .+.||.+...... ....+..| .....|+.| +|+
T Consensus 13 ~~h~~~i~~~~~~~--~~l~s~~~dg---~i~iw~~~~~~~~~~~~~~~~~~~h----~~~v~~~~~-------~~~~~~ 76 (397)
T 1sq9_A 13 KAHDADIFSVSACN--SFTVSCSGDG---YLKVWDNKLLDNENPKDKSYSHFVH----KSGLHHVDV-------LQAIER 76 (397)
T ss_dssp SCSSSCEEEEEECS--SEEEEEETTS---EEEEEESBCCTTCCGGGGEEEEECC----TTCEEEEEE-------EEEEET
T ss_pred hhhhcCeEEEEecC--CeEEEEcCCC---EEEEEECCCcccccCCCcceEEecC----CCcEEEEEE-------eccccc
Confidence 35889999999999 8999998887 5566665544310 00111222 223467777 567
Q ss_pred -C---CEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCc-----ccceeeEEec----
Q 010748 209 -G---NFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSH-----TDSVLGLAWN---- 275 (502)
Q Consensus 209 -~---~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h-----~~~V~~l~~~---- 275 (502)
+ ++|++|+.||.|++|++....... ......+..| ...|.+++|+
T Consensus 77 ~g~~~~~l~s~~~dg~i~iw~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 134 (397)
T 1sq9_A 77 DAFELCLVATTSFSGDLLFYRITREDETK----------------------KVIFEKLDLLDSDMKKHSFWALKWGASND 134 (397)
T ss_dssp TTEEEEEEEEEETTSCEEEEEEEECTTTC----------------------CEEEEEECCSCTTGGGSCEEEEEEECCC-
T ss_pred CCccccEEEEEcCCCCEEEEEccCCcccc----------------------cccceeecccccccCCCcEEEEEEeeccC
Confidence 8 999999999999999997543210 1112234456 5899999999
Q ss_pred cCCCcE-EEEEecCCcEEEEeCCC------CeeeE-----ee-------ccCCCCeEEEEEcCCCCcEEEEEeCCCcEEE
Q 010748 276 KEFRNI-LASASADKQVKIWDVAA------GKCNL-----TL-------EHHTDKVQAVAWNHHSPQILLSGSFDRSVVM 336 (502)
Q Consensus 276 ~~~~~~-l~sgs~dg~v~vwd~~~------~~~~~-----~~-------~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~i 336 (502)
|+ +.+ |++|+.||.|++||+.+ ++.+. .+ ..|...|.+++|+|++ +|++++.||.|++
T Consensus 135 ~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i 211 (397)
T 1sq9_A 135 RL-LSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQI 211 (397)
T ss_dssp ----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEE
T ss_pred CC-CceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEE
Confidence 88 457 99999999999999998 66666 66 4489999999999988 8999999999999
Q ss_pred EecCCCCCccceEe---e---cCCeeEEEeCCCCCCEEEEEeCC---CcEEEEECCCCCCCCCCCCCccceEEec-----
Q 010748 337 KDARISTHSGFKWA---V---AADVESLAWDPHAEHSFVVSLED---GTIKGFDIRTAKSDPDSTSQQSSFTLHA----- 402 (502)
Q Consensus 337 wd~~~~~~~~~~~~---~---~~~v~~v~~~~~~~~~~~~~~~d---g~v~i~d~~~~~~~~~~~~~~~~~~~~~----- 402 (502)
||+++.+....... | ...|.+++|+|++. ++++++.+ |.|++||+++. .++..+..
T Consensus 212 ~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~-~l~~~~~d~~~g~i~i~d~~~~---------~~~~~~~~~~~~~ 281 (397)
T 1sq9_A 212 SELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGS-LLAIAHDSNSFGCITLYETEFG---------ERIGSLSVPTHSS 281 (397)
T ss_dssp EETTTTEEEEEEECCC---CCCCCEEEEEECSSTT-EEEEEEEETTEEEEEEEETTTC---------CEEEEECBC----
T ss_pred EECCCCceeEEEeccccccccCCccceEEECCCCC-EEEEEecCCCCceEEEEECCCC---------cccceeccCcccc
Confidence 99998776665555 6 88999999999865 89999999 99999999986 67778887
Q ss_pred --------cCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEec------CC---------------CCcEE
Q 010748 403 --------HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRN------PK---------------AGAVF 453 (502)
Q Consensus 403 --------h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~------~~---------------~~~v~ 453 (502)
|...|.+++|+|++ .+|++++.||.|++||+.+++ .+..+. .| ...|+
T Consensus 282 ~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~ 358 (397)
T 1sq9_A 282 QASLGEFAHSSWVMSLSFNDSG-ETLCSAGWDGKLRFWDVKTKE--RITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVF 358 (397)
T ss_dssp ----CCBSBSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTE--EEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEE
T ss_pred cccccccccCCcEEEEEECCCC-CEEEEEeCCCeEEEEEcCCCc--eeEEEecccCcccchhhhhccccccccccCCcee
Confidence 99999999999998 899999999999999999887 455555 66 89999
Q ss_pred EEEEcCCC----------CcEEEEEeCCCcEEEEECCCCc
Q 010748 454 SVAFSEDS----------PFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 454 ~~~~spd~----------~~ll~sg~~dg~i~vwd~~~~~ 483 (502)
+++|+|++ . +|++|+.||.|++|++.+++
T Consensus 359 ~~~~~~~g~~~~~~~~~~~-~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 359 DVKFLKKGWRSGMGADLNE-SLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp EEEEECTTTSBSTTCTTSC-EEEEEETTTEEEEEEEEC--
T ss_pred EEEeccccccccccccccc-eEEEecCCCcEEEEEcCCCC
Confidence 99999998 5 69999999999999998763
No 35
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.4e-35 Score=291.13 Aligned_cols=290 Identities=13% Similarity=0.147 Sum_probs=219.5
Q ss_pred CCCccccccccccCCC-ceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCC-CCCEEE
Q 010748 136 DEDSEDLEDMTINPND-AVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDRE-KGNFMA 213 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~-~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~la 213 (502)
..|...|.+++|+|++ ++|++|+.++ .+.||.+..... ...+. .........+++| +| ++++|+
T Consensus 70 ~~h~~~v~~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~--~~~~~--~~~h~~~v~~~~~-------~~~~~~~l~ 135 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPTTVAVGSKGG---DIILWDYDVQNK--TSFIQ--GMGPGDAITGMKF-------NQFNTNQLF 135 (383)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEEBTS---CEEEEETTSTTC--EEEEC--CCSTTCBEEEEEE-------ETTEEEEEE
T ss_pred cCCCCCEEEEEECCCCCCEEEEEcCCC---eEEEEeCCCccc--ceeee--cCCcCCceeEEEe-------CCCCCCEEE
Confidence 3478899999999999 9999999887 456666554332 11111 0011233367777 57 689999
Q ss_pred EecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEE
Q 010748 214 VGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKI 293 (502)
Q Consensus 214 ~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~v 293 (502)
+|+.|+.|++||+.. ... ........|...|.+++|+|+ +.+|++|+.|+.|++
T Consensus 136 s~~~d~~i~iwd~~~-~~~------------------------~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~i 189 (383)
T 3ei3_B 136 VSSIRGATTLRDFSG-SVI------------------------QVFAKTDSWDYWYCCVDVSVS-RQMLATGDSTGRLLL 189 (383)
T ss_dssp EEETTTEEEEEETTS-CEE------------------------EEEECCCCSSCCEEEEEEETT-TTEEEEEETTSEEEE
T ss_pred EEeCCCEEEEEECCC-Cce------------------------EEEeccCCCCCCeEEEEECCC-CCEEEEECCCCCEEE
Confidence 999999999999973 111 111122346688999999999 569999999999999
Q ss_pred EeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCC---ccceEeecCCeeEEEeCC-CCCCEEE
Q 010748 294 WDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH---SGFKWAVAADVESLAWDP-HAEHSFV 369 (502)
Q Consensus 294 wd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~---~~~~~~~~~~v~~v~~~~-~~~~~~~ 369 (502)
||+ +++++..+..|...|.+++|+|++..+|++++.|+.|++||+++... ......+...|.+++|+| ++. +++
T Consensus 190 ~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-~l~ 267 (383)
T 3ei3_B 190 LGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDST-KLL 267 (383)
T ss_dssp EET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSC-EEE
T ss_pred EEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCC-EEE
Confidence 999 57888999999999999999999944999999999999999998432 222347889999999999 654 899
Q ss_pred EEeCCCcEEEEECCCCCCCCCCCCCccceEEeccC-----------------CCeeEEEEcCCCCCEEEEEeCCCcEEEE
Q 010748 370 VSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHD-----------------KAVCTISYNPLVPNLLATGSTDKMVKLW 432 (502)
Q Consensus 370 ~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~-----------------~~v~~l~~sp~~~~~l~t~s~dg~i~vw 432 (502)
+++.||.|++||+++.. ....+..|. ..+..++|+|++ .+ +|+.|+.|++|
T Consensus 268 ~~~~d~~i~iwd~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg-~~--s~s~d~~i~iw 335 (383)
T 3ei3_B 268 TTDQRNEIRVYSSYDWS---------KPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDD-QL--LLNDKRTIDIY 335 (383)
T ss_dssp EEESSSEEEEEETTBTT---------SCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCT-TT--CTTCCCCEEEE
T ss_pred EEcCCCcEEEEECCCCc---------cccccccccccccccccceEEeccCCCCceEEEecCCc-cc--ccCCCCeEEEE
Confidence 99999999999999863 333333332 334456666665 33 77789999999
Q ss_pred ECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010748 433 DLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 433 d~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~ 481 (502)
|+.+++.........|.+.+.+++|+|+++ +|++|+ ||.|+|||+.+
T Consensus 336 d~~~~~~~~~l~~~~~~~~~~~~~~s~~g~-~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 336 DANSGGLVHQLRDPNAAGIISLNKFSPTGD-VLASGM-GFNILIWNRED 382 (383)
T ss_dssp ETTTCCEEEEECBTTBCSCCCEEEECTTSS-EEEEEE-TTEEEEEECC-
T ss_pred ecCCCceeeeecCCCCCceEEEEEEecCcc-EEEEec-CCcEEEEecCC
Confidence 999988433333333567788889999999 488886 89999999875
No 36
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=6.3e-35 Score=303.89 Aligned_cols=291 Identities=23% Similarity=0.346 Sum_probs=237.9
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEe
Q 010748 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g 215 (502)
..|...|.++.|+|++++|++++.++ .+++|. ........+..|. ....++++ +|++++|+++
T Consensus 259 ~~~~~~v~~v~~~~d~~~l~~~~~d~---~i~~w~--~~~~~~~~~~~h~-----~~v~~~~~-------~~~~~~l~t~ 321 (577)
T 2ymu_A 259 TGHSSSVNGVAFRPDGQTIASASDDK---TVKLWN--RNGQLLQTLTGHS-----SSVWGVAF-------SPDGQTIASA 321 (577)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTS---CEEEEE--TTSCEEEEECCCS-----SCEEEEEE-------CTTSSEEEEE
T ss_pred ecCCCCEEEEEEcCCCCEEEEEeCCC---EEEEEe--CCCcEEEEEecCC-----CCeEEEEE-------CCCCCEEEEE
Confidence 34778899999999999999999887 445554 3322001111222 22245555 7999999999
Q ss_pred cCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEe
Q 010748 216 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWD 295 (502)
Q Consensus 216 ~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd 295 (502)
+.|+.|++|++... ....+.+|...|.+++|+|+ +.+|++|+.|+.|++|+
T Consensus 322 ~~d~~i~~w~~~~~----------------------------~~~~~~~~~~~v~~~~~s~~-g~~l~~~~~dg~v~~~~ 372 (577)
T 2ymu_A 322 SDDKTVKLWNRNGQ----------------------------HLQTLTGHSSSVWGVAFSPD-GQTIASASDDKTVKLWN 372 (577)
T ss_dssp ETTSCEEEEETTSC----------------------------EEEEECCCSSCEEEEEECTT-SSEEEEEETTSEEEEEE
T ss_pred eCCCeEEEEeCCCC----------------------------eeEEEeCCCCCEEEEEECCC-CCEEEEEeCCCEEEEEc
Confidence 99999999998631 11234578999999999999 56999999999999999
Q ss_pred CCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEEEEEeCCC
Q 010748 296 VAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDG 375 (502)
Q Consensus 296 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg 375 (502)
. +++.+..+.+|...|++++|+|++ ++|++++.|+.|++||.. .+.......|...|.+++|+|++. ++++++.|+
T Consensus 373 ~-~~~~~~~~~~~~~~v~~~~~s~dg-~~l~~~~~d~~v~~~~~~-~~~~~~~~~~~~~v~~~~~s~d~~-~l~~~~~d~ 448 (577)
T 2ymu_A 373 R-NGQLLQTLTGHSSSVRGVAFSPDG-QTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDDQ-TIASASDDK 448 (577)
T ss_dssp T-TCCEEEEEECCSSCEEEEEECTTS-SCEEEEETTSEEEEECTT-CCEEEEEECCSSCEEEEEECTTSS-EEEEEETTS
T ss_pred C-CCCEEEEecCCCCCeEEEEECCCC-CEEEEEeCCCEEEEEeCC-CCEEEEecCCCCCeEEEEECCCCC-EEEEEcCCC
Confidence 5 678888999999999999999999 899999999999999964 344444667889999999999865 899999999
Q ss_pred cEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCcEEEE
Q 010748 376 TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSV 455 (502)
Q Consensus 376 ~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~ 455 (502)
.|++||... ..+..+.+|...|++++|+|++ .+|++++.|+.|++||.. ++ ++..+.+|...|+++
T Consensus 449 ~v~~w~~~~----------~~~~~~~~~~~~v~~~~~spd~-~~las~~~d~~i~iw~~~-~~--~~~~~~~h~~~v~~l 514 (577)
T 2ymu_A 449 TVKLWNRNG----------QLLQTLTGHSSSVRGVAFSPDG-QTIASASDDKTVKLWNRN-GQ--LLQTLTGHSSSVRGV 514 (577)
T ss_dssp EEEEEETTS----------CEEEEEECCSSCEEEEEECTTS-CEEEEEETTSEEEEEETT-SC--EEEEEECCSSCEEEE
T ss_pred EEEEEECCC----------CEEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCEEEEEcCC-CC--EEEEEeCCCCCEEEE
Confidence 999999642 5678889999999999999998 999999999999999964 44 567788999999999
Q ss_pred EEcCCCCcEEEEEeCCCcEEEEECCCCccccccccCC
Q 010748 456 AFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKY 492 (502)
Q Consensus 456 ~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~~~~ 492 (502)
+|+|++++ |++++.||.|+|||. +++.+....+|.
T Consensus 515 ~~s~dg~~-l~s~~~dg~v~lwd~-~~~~~~~~~~h~ 549 (577)
T 2ymu_A 515 AFSPDGQT-IASASDDKTVKLWNR-NGQLLQTLTGHS 549 (577)
T ss_dssp EECTTSSC-EEEEETTSEEEEECT-TSCEEEEEECCS
T ss_pred EEcCCCCE-EEEEECcCEEEEEeC-CCCEEEEEcCCC
Confidence 99999995 899999999999996 567766655543
No 37
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=6.4e-36 Score=293.38 Aligned_cols=294 Identities=14% Similarity=0.139 Sum_probs=230.5
Q ss_pred CccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC
Q 010748 138 DSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM 217 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~ 217 (502)
|...|.+++|+|++++|++|+.++ .+.||............+..| .....+++| +|++++|++|+.
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~---~v~i~~~~~~~~~~~~~~~~h----~~~v~~~~~-------~~~~~~l~~~~~ 72 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNH---EVHIYEKSGNKWVQVHELKEH----NGQVTGVDW-------APDSNRIVTCGT 72 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSS---EEEEEEEETTEEEEEEEEECC----SSCEEEEEE-------ETTTTEEEEEET
T ss_pred cCCCeEEEEECCCCCEEEEEeCCC---EEEEEeCCCCcEEeeeeecCC----CCcccEEEE-------eCCCCEEEEEcC
Confidence 678899999999999999998776 566666654420001112222 233467777 689999999999
Q ss_pred CCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeCC
Q 010748 218 EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVA 297 (502)
Q Consensus 218 dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~ 297 (502)
||.|++|++..... .....+..|...|.+++|+|+ +.+|++|+.|+.|++||+.
T Consensus 73 dg~i~vwd~~~~~~-------------------------~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~i~d~~ 126 (372)
T 1k8k_C 73 DRNAYVWTLKGRTW-------------------------KPTLVILRINRAARCVRWAPN-EKKFAVGSGSRVISICYFE 126 (372)
T ss_dssp TSCEEEEEEETTEE-------------------------EEEEECCCCSSCEEEEEECTT-SSEEEEEETTSSEEEEEEE
T ss_pred CCeEEEEECCCCee-------------------------eeeEEeecCCCceeEEEECCC-CCEEEEEeCCCEEEEEEec
Confidence 99999999864321 111223468899999999999 5699999999999999998
Q ss_pred CCee---e-EeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecC------------------CCCCccceEeecCCe
Q 010748 298 AGKC---N-LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDAR------------------ISTHSGFKWAVAADV 355 (502)
Q Consensus 298 ~~~~---~-~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~------------------~~~~~~~~~~~~~~v 355 (502)
.++. . .....|...|.+++|+|++ .+|++++.||.|++||++ ..........+...+
T Consensus 127 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 205 (372)
T 1k8k_C 127 QENDWWVCKHIKKPIRSTVLSLDWHPNS-VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWV 205 (372)
T ss_dssp TTTTEEEEEEECTTCCSCEEEEEECTTS-SEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCE
T ss_pred CCCcceeeeeeecccCCCeeEEEEcCCC-CEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeE
Confidence 8762 3 3336789999999999998 899999999999999975 233333333677889
Q ss_pred eEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECC
Q 010748 356 ESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLS 435 (502)
Q Consensus 356 ~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~ 435 (502)
.+++|+|++. ++++++.||.|++||+++. .++..+..|..+|.+++|+|++ .+|++| .|+.|++|++.
T Consensus 206 ~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~---------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~-~d~~i~i~~~~ 273 (372)
T 1k8k_C 206 HGVCFSANGS-RVAWVSHDSTVCLADADKK---------MAVATLASETLPLLAVTFITES-SLVAAG-HDCFPVLFTYD 273 (372)
T ss_dssp EEEEECSSSS-EEEEEETTTEEEEEEGGGT---------TEEEEEECSSCCEEEEEEEETT-EEEEEE-TTSSCEEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCEEEEEECCCC---------ceeEEEccCCCCeEEEEEecCC-CEEEEE-eCCeEEEEEcc
Confidence 9999999865 8999999999999999986 7788889999999999999987 777776 89999999998
Q ss_pred C--CCeeEE------------------------------------EEe-cCCCCcEEEEEEc-CCC---CcEEEEEeCCC
Q 010748 436 N--NQPSCI------------------------------------ASR-NPKAGAVFSVAFS-EDS---PFVLAIGGSKG 472 (502)
Q Consensus 436 ~--~~~~~~------------------------------------~~~-~~~~~~v~~~~~s-pd~---~~ll~sg~~dg 472 (502)
. +...++ ..+ .+|..+|++++|+ +++ . +|++|+.||
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~-~l~s~~~Dg 352 (372)
T 1k8k_C 274 SAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCS-QFCTTGMDG 352 (372)
T ss_dssp TTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCS-EEEEEETTS
T ss_pred CcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCccee-eEEEecCCC
Confidence 7 321110 222 4899999999976 555 6 699999999
Q ss_pred cEEEEECCCCccc
Q 010748 473 KLEIWDTLSDAGI 485 (502)
Q Consensus 473 ~i~vwd~~~~~~~ 485 (502)
.|++|++.+++.+
T Consensus 353 ~i~~W~~~~~~~~ 365 (372)
T 1k8k_C 353 GMSIWDVRSLESA 365 (372)
T ss_dssp EEEEEEHHHHHHH
T ss_pred ceEEEEecChhHh
Confidence 9999999886654
No 38
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.6e-34 Score=279.82 Aligned_cols=292 Identities=18% Similarity=0.296 Sum_probs=229.7
Q ss_pred CCCccccccccccCC-CceEEEEEecCCcceeEEEEEecCCCCCCC---eeeeeccccCCCcceeeeecCCCCCCCCCCE
Q 010748 136 DEDSEDLEDMTINPN-DAVIVCARNEDDVSHLEVYILEESDGGDPN---LYVHHHIIIPAFPLCMAWLDCPLKDREKGNF 211 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~-~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 211 (502)
..|.+.|.+++|+|+ +++|++|+.|+ .++||.+......... .+..| .....++.| +|++++
T Consensus 35 ~GH~~~V~~v~~sp~~~~~l~S~s~D~---~i~vWd~~~~~~~~~~~~~~l~~h----~~~V~~~~~-------s~dg~~ 100 (340)
T 4aow_A 35 KGHNGWVTQIATTPQFPDMILSASRDK---TIIMWKLTRDETNYGIPQRALRGH----SHFVSDVVI-------SSDGQF 100 (340)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTS---CEEEEEECCSSSCSEEEEEEECCC----SSCEEEEEE-------CTTSSE
T ss_pred CCccCCEEEEEEeCCCCCEEEEEcCCC---eEEEEECCCCCcccceeeEEEeCC----CCCEEEEEE-------CCCCCE
Confidence 459999999999998 68999999886 6788888765431100 01112 233467777 799999
Q ss_pred EEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcE
Q 010748 212 MAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQV 291 (502)
Q Consensus 212 la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v 291 (502)
|++|+.|+.|++|+...... ......+...+..+.+++. +.+|++|+.|+.+
T Consensus 101 l~s~~~d~~i~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~-~~~l~s~s~d~~~ 152 (340)
T 4aow_A 101 ALSGSWDGTLRLWDLTTGTT---------------------------TRRFVGHTKDVLSVAFSSD-NRQIVSGSRDKTI 152 (340)
T ss_dssp EEEEETTSEEEEEETTTTEE---------------------------EEEEECCSSCEEEEEECTT-SSCEEEEETTSCE
T ss_pred EEEEcccccceEEeecccce---------------------------eeeecCCCCceeEEEEeec-CccceeecCCCeE
Confidence 99999999999999874321 2223356778889999998 5689999999999
Q ss_pred EEEeCCCCee-eEeeccCCCCeEEEEEcCCCC-cEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEEE
Q 010748 292 KIWDVAAGKC-NLTLEHHTDKVQAVAWNHHSP-QILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFV 369 (502)
Q Consensus 292 ~vwd~~~~~~-~~~~~~h~~~v~~l~~~~~~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~ 369 (502)
++||+..... ...+.+|...+.+++|++.+. .++++++.|+.|++||+++.........|...|.+++|+|++. +|+
T Consensus 153 ~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~ 231 (340)
T 4aow_A 153 KLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS-LCA 231 (340)
T ss_dssp EEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEE
T ss_pred EEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCC-EEE
Confidence 9999976644 445578999999999998753 4678999999999999999887776778899999999999865 899
Q ss_pred EEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeE-------E
Q 010748 370 VSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSC-------I 442 (502)
Q Consensus 370 ~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~-------~ 442 (502)
+|+.||.|++||+++. .++..+. +...|.++.|+|++ .+++++.|+.|++||+++..... .
T Consensus 232 s~s~Dg~i~iwd~~~~---------~~~~~~~-~~~~v~~~~~~~~~--~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 299 (340)
T 4aow_A 232 SGGKDGQAMLWDLNEG---------KHLYTLD-GGDIINALCFSPNR--YWLCAATGPSIKIWDLEGKIIVDELKQEVIS 299 (340)
T ss_dssp EEETTCEEEEEETTTT---------EEEEEEE-CSSCEEEEEECSSS--SEEEEEETTEEEEEETTTTEEEEEECCC---
T ss_pred EEeCCCeEEEEEeccC---------ceeeeec-CCceEEeeecCCCC--ceeeccCCCEEEEEECCCCeEEEecccccee
Confidence 9999999999999986 5566665 45689999999975 45566779999999998765321 1
Q ss_pred EEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010748 443 ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 443 ~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~ 483 (502)
.....|...|++++|+|++++ |++|+.||.|+|||+.+|.
T Consensus 300 ~~~~~h~~~v~~l~~s~dg~~-l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 300 TSSKAEPPQCTSLAWSADGQT-LFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp ----CCCCCEEEEEECTTSSE-EEEEETTSCEEEEEEEC--
T ss_pred eeccCCCCCEEEEEECCCCCE-EEEEeCCCEEEEEeCCCcC
Confidence 223468889999999999994 8999999999999999875
No 39
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=9.3e-35 Score=280.77 Aligned_cols=292 Identities=13% Similarity=0.150 Sum_probs=234.5
Q ss_pred CccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC
Q 010748 138 DSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM 217 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~ 217 (502)
+...|.+++|+|+|++++++...+.. .+| .... ...............+++| +|++++|++++
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~---~~~--~~~~----~~~~~~~~~h~~~v~~~~~-------~~~~~~l~~~~- 70 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDAL---IGP--GIPR----HARQINTLNHGEVVCAVTI-------SNPTRHVYTGG- 70 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSS---SST--TCCS----EEEEEEEECCSSCCCEEEE-------CSSSSEEEEEC-
T ss_pred cCCceeEEEECCCCCEEEeecCCCcE---ecc--ccCC----ccccceeccCCCceEEEEE-------ecCCcEEEEcC-
Confidence 45679999999999999988766521 111 1111 1111111112334467777 78999999999
Q ss_pred CCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeCC
Q 010748 218 EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVA 297 (502)
Q Consensus 218 dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~ 297 (502)
+|.|++|++.......+.. .....+|...|.+++|+|+ +.+|++|+.||.|++||+.
T Consensus 71 dg~i~iw~~~~~~~~~~~~----------------------~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~ 127 (337)
T 1gxr_A 71 KGCVKVWDISHPGNKSPVS----------------------QLDCLNRDNYIRSCKLLPD-GCTLIVGGEASTLSIWDLA 127 (337)
T ss_dssp BSEEEEEETTSTTCCSCSE----------------------EEECSCTTSBEEEEEECTT-SSEEEEEESSSEEEEEECC
T ss_pred CCeEEEEECCCCCceeeee----------------------cccccCCCCcEEEEEEcCC-CCEEEEEcCCCcEEEEECC
Confidence 9999999998644332211 1122368899999999998 5699999999999999999
Q ss_pred CCe--eeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEEEEEeCCC
Q 010748 298 AGK--CNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDG 375 (502)
Q Consensus 298 ~~~--~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg 375 (502)
+++ ....+..|...|.+++|+|++ .+|++++.+|.|++||+++.+.......+...+.+++|+|++. ++++++.+|
T Consensus 128 ~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg 205 (337)
T 1gxr_A 128 APTPRIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGT-KLWTGGLDN 205 (337)
T ss_dssp CC--EEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTS
T ss_pred CCCcceeeecccCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCC-EEEEEecCC
Confidence 887 667788899999999999998 8999999999999999998876665566888999999999765 899999999
Q ss_pred cEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCcEEEE
Q 010748 376 TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSV 455 (502)
Q Consensus 376 ~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~ 455 (502)
.|++||+++. ..+..+ .|...+.+++|+|++ .+|++++.++.|++||+.+.+ ......|...|.++
T Consensus 206 ~i~~~d~~~~---------~~~~~~-~~~~~v~~~~~s~~~-~~l~~~~~~~~i~~~~~~~~~---~~~~~~~~~~v~~~ 271 (337)
T 1gxr_A 206 TVRSWDLREG---------RQLQQH-DFTSQIFSLGYCPTG-EWLAVGMESSNVEVLHVNKPD---KYQLHLHESCVLSL 271 (337)
T ss_dssp EEEEEETTTT---------EEEEEE-ECSSCEEEEEECTTS-SEEEEEETTSCEEEEETTSSC---EEEECCCSSCEEEE
T ss_pred cEEEEECCCC---------ceEeee-cCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCC---eEEEcCCccceeEE
Confidence 9999999976 444444 478899999999998 899999999999999999886 34667889999999
Q ss_pred EEcCCCCcEEEEEeCCCcEEEEECCCCcccc
Q 010748 456 AFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 456 ~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~ 486 (502)
+|+|+++ +|++++.+|.|++|++.+++.+.
T Consensus 272 ~~~~~~~-~l~~~~~dg~i~~~~~~~~~~~~ 301 (337)
T 1gxr_A 272 KFAYCGK-WFVSTGKDNLLNAWRTPYGASIF 301 (337)
T ss_dssp EECTTSS-EEEEEETTSEEEEEETTTCCEEE
T ss_pred EECCCCC-EEEEecCCCcEEEEECCCCeEEE
Confidence 9999999 58999999999999999988764
No 40
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.3e-34 Score=288.77 Aligned_cols=263 Identities=19% Similarity=0.334 Sum_probs=218.1
Q ss_pred ccCCCcceeeeecCCCCCCCC-CCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcc
Q 010748 188 IIPAFPLCMAWLDCPLKDREK-GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHT 266 (502)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~s~~-~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 266 (502)
.....+.+++| +|+ +++||+|+.+|.|+||++........ ..........+.+|.
T Consensus 126 ~h~~~v~~l~~-------~p~~~~~lat~~~dg~V~vwd~~~~~~~~~-----------------~~~~~~~~~~~~~h~ 181 (430)
T 2xyi_A 126 NHEGEVNRARY-------MPQNACVIATKTPSSDVLVFDYTKHPSKPE-----------------PSGECQPDLRLRGHQ 181 (430)
T ss_dssp EESSCCSEEEE-------ETTEEEEEEEECSSSCEEEEEGGGSCSSCC-----------------TTCCCCCSEEEECCS
T ss_pred cCCCcEEEEEE-------CCCCCcEEEEECCCCcEEEEECCCcccccC-----------------ccccCCCcEEecCCC
Confidence 33455678887 565 78999999999999999964211100 001123344556899
Q ss_pred cceeeEEeccCCCcEEEEEecCCcEEEEeCCCCee-------eEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEec
Q 010748 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKC-------NLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDA 339 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~-------~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~ 339 (502)
..|++|+|+|++..+|++|+.||+|++|++.++.. ...+.+|...|.+++|+|.+..+|++++.||.|++||+
T Consensus 182 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~ 261 (430)
T 2xyi_A 182 KEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDT 261 (430)
T ss_dssp SCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred CCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEEC
Confidence 99999999999666999999999999999987422 45677899999999999966699999999999999999
Q ss_pred CCCC---CccceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCC
Q 010748 340 RIST---HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLV 416 (502)
Q Consensus 340 ~~~~---~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~ 416 (502)
++.. .......+...|++++|+|++..++++|+.+|.|++||+++. ..++..+..|...|++++|+|++
T Consensus 262 ~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~--------~~~~~~~~~h~~~v~~i~~sp~~ 333 (430)
T 2xyi_A 262 RNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL--------KLKLHSFESHKDEIFQVQWSPHN 333 (430)
T ss_dssp TCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT--------TSCSEEEECCSSCEEEEEECSSC
T ss_pred CCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCC--------CCCeEEeecCCCCEEEEEECCCC
Confidence 9873 344445788899999999998888999999999999999986 36788899999999999999998
Q ss_pred CCEEEEEeCCCcEEEEECCCCC------------eeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCC
Q 010748 417 PNLLATGSTDKMVKLWDLSNNQ------------PSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 417 ~~~l~t~s~dg~i~vwd~~~~~------------~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~ 482 (502)
+.+|++++.|+.|+|||+.... +..+..+.+|...|++++|+|+++++|++++.||.|+||++...
T Consensus 334 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 334 ETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp TTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred CCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 7789999999999999998722 24677888999999999999999988999999999999999754
No 41
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-35 Score=301.61 Aligned_cols=311 Identities=11% Similarity=0.080 Sum_probs=226.5
Q ss_pred CccccccccccCCC---------ceEEEEEecC----------------CcceeEEEEEecCCCCCC--CeeeeeccccC
Q 010748 138 DSEDLEDMTINPND---------AVIVCARNED----------------DVSHLEVYILEESDGGDP--NLYVHHHIIIP 190 (502)
Q Consensus 138 ~~~~v~~~~~~p~~---------~~l~~~~~~~----------------~~~~l~v~~~~~~~~~~~--~l~~~~~~~~~ 190 (502)
....|.+|.|+|++ ++||+|+..+ ..+.++||.++....... ....||..
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~--- 208 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFG--- 208 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCC---
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCC---
Confidence 35689999999987 7888877442 124688998876542000 01233322
Q ss_pred CCcceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCccccee
Q 010748 191 AFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVL 270 (502)
Q Consensus 191 ~~~~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~ 270 (502)
...+++|.+. ..+++++.+||+|+.||+|+|||+........... ........+.+|...|+
T Consensus 209 -~V~~v~wsp~-~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~----------------~~~~p~~~l~~h~~~v~ 270 (524)
T 2j04_B 209 -EVWDLKWHEG-CHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFK----------------MCEKPSLTLSLADSLIT 270 (524)
T ss_dssp -SEEEEEECSS-CCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEE----------------CCCSCSEEECCTTTCEE
T ss_pred -cEEEEEECCC-CCCCCCCceEEEEecCCeEEEEEcCCCccccccce----------------eecCceEEEEcCCCCEE
Confidence 2367788532 01223478999999999999999975432210000 00112234568999999
Q ss_pred eEEeccCCCcEEEEEecCCcEEEEeCCCCe-eeEeeccCCCCeEEE--EEcCCCCcEEEEEeCCCcEEEEecCCCCCccc
Q 010748 271 GLAWNKEFRNILASASADKQVKIWDVAAGK-CNLTLEHHTDKVQAV--AWNHHSPQILLSGSFDRSVVMKDARISTHSGF 347 (502)
Q Consensus 271 ~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~-~~~~~~~h~~~v~~l--~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~ 347 (502)
+++|+++ . .|++|+.||+|++||+.++. +...+.+|...|++| .|+|++.++|++|+.|++|+|||+++.+....
T Consensus 271 sv~~s~~-~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~ 348 (524)
T 2j04_B 271 TFDFLSP-T-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKT 348 (524)
T ss_dssp EEEESSS-S-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCE
T ss_pred EEEecCC-C-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccc
Confidence 9999986 3 89999999999999999774 456688999999999 46666547899999999999999998776554
Q ss_pred eEeecC--CeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeC
Q 010748 348 KWAVAA--DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST 425 (502)
Q Consensus 348 ~~~~~~--~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~ 425 (502)
...+.. .|.+++|+|++. .+++++.|++|++||+++. ..+..+.+|...|++++|+|++ .+|++|+.
T Consensus 349 ~~~~~~~~~v~~v~fsp~~~-~l~s~~~d~tv~lwd~~~~---------~~~~~l~gH~~~V~sva~Sp~g-~~l~Sgs~ 417 (524)
T 2j04_B 349 TVSRFRGSNLVPVVYCPQIY-SYIYSDGASSLRAVPSRAA---------FAVHPLVSRETTITAIGVSRLH-PMVLAGSA 417 (524)
T ss_dssp EEEECSCCSCCCEEEETTTT-EEEEECSSSEEEEEETTCT---------TCCEEEEECSSCEEEEECCSSC-CBCEEEET
T ss_pred cccccccCcccceEeCCCcC-eEEEeCCCCcEEEEECccc---------ccceeeecCCCceEEEEeCCCC-CeEEEEEC
Confidence 445543 588999999866 6899999999999999986 5667788999999999999998 88999999
Q ss_pred CCcEEEEECCCCC------------------------------------------eeEEEEecCCCCcEEEEEEcCCCC-
Q 010748 426 DKMVKLWDLSNNQ------------------------------------------PSCIASRNPKAGAVFSVAFSEDSP- 462 (502)
Q Consensus 426 dg~i~vwd~~~~~------------------------------------------~~~~~~~~~~~~~v~~~~~spd~~- 462 (502)
||+|++||+.... ..++..+.+|.+.|++++|+|+++
T Consensus 418 Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~ 497 (524)
T 2j04_B 418 DGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAG 497 (524)
T ss_dssp TTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTT
T ss_pred CCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCc
Confidence 9999999853210 011233456788999999999963
Q ss_pred -cEEEEEeCCCcEEEEECCCC
Q 010748 463 -FVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 463 -~ll~sg~~dg~i~vwd~~~~ 482 (502)
.+||+|+.+|.|+||++...
T Consensus 498 ~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 498 GKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp TTEEEEECTTSEEEEEECSCC
T ss_pred cHHHHhhccCceEEEEEcccc
Confidence 36999999999999998654
No 42
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-34 Score=284.08 Aligned_cols=290 Identities=13% Similarity=0.168 Sum_probs=234.3
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010748 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~ 216 (502)
.|...|.+++|+|++++|++|+.++ .+.||.+.... ....+..|. ....+++| +|++++|++++
T Consensus 30 ~h~~~v~~~~~s~~~~~l~~~~~dg---~i~vwd~~~~~--~~~~~~~h~----~~v~~~~~-------~~~~~~l~s~~ 93 (369)
T 3zwl_B 30 GHERPLTQVKYNKEGDLLFSCSKDS---SASVWYSLNGE--RLGTLDGHT----GTIWSIDV-------DCFTKYCVTGS 93 (369)
T ss_dssp CCSSCEEEEEECTTSCEEEEEESSS---CEEEEETTTCC--EEEEECCCS----SCEEEEEE-------CTTSSEEEEEE
T ss_pred EeeceEEEEEEcCCCCEEEEEeCCC---EEEEEeCCCch--hhhhhhhcC----CcEEEEEE-------cCCCCEEEEEe
Confidence 4788999999999999999999887 44555543322 111222232 23367777 78999999999
Q ss_pred CCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecC-----CcE
Q 010748 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD-----KQV 291 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~d-----g~v 291 (502)
.||.|++||+.+..... .+ .|...|.+++|+|+ +.+|++++.+ +.|
T Consensus 94 ~dg~i~iwd~~~~~~~~---------------------------~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~~~~g~i 144 (369)
T 3zwl_B 94 ADYSIKLWDVSNGQCVA---------------------------TW-KSPVPVKRVEFSPC-GNYFLAILDNVMKNPGSI 144 (369)
T ss_dssp TTTEEEEEETTTCCEEE---------------------------EE-ECSSCEEEEEECTT-SSEEEEEECCBTTBCCEE
T ss_pred CCCeEEEEECCCCcEEE---------------------------Ee-ecCCCeEEEEEccC-CCEEEEecCCccCCCCEE
Confidence 99999999997543221 11 27788999999999 5689999998 999
Q ss_pred EEEeCCCCe-----------eeEeeccCCC--CeEEEEEcCCCCcEEEEEeCCCcEEEEecCC-CCCccceEeecCCeeE
Q 010748 292 KIWDVAAGK-----------CNLTLEHHTD--KVQAVAWNHHSPQILLSGSFDRSVVMKDARI-STHSGFKWAVAADVES 357 (502)
Q Consensus 292 ~vwd~~~~~-----------~~~~~~~h~~--~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~v~~ 357 (502)
++||+..+. .+..+..|.. .+.+++|+|++ .+|++++.+|.|++||+++ .........+...|.+
T Consensus 145 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~ 223 (369)
T 3zwl_B 145 NIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKG-KYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISD 223 (369)
T ss_dssp EEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGG-CEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEE
T ss_pred EEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCC-CEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeE
Confidence 999997653 3344555666 99999999998 8999999999999999998 4555555567889999
Q ss_pred EEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCC----------
Q 010748 358 LAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK---------- 427 (502)
Q Consensus 358 v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg---------- 427 (502)
++|+|++. ++++++.+|.|++||+++. ..+..+. +...+.+++|+|++ .++++++.++
T Consensus 224 ~~~~~~~~-~l~~~~~d~~i~v~d~~~~---------~~~~~~~-~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~ 291 (369)
T 3zwl_B 224 MQFSPDLT-YFITSSRDTNSFLVDVSTL---------QVLKKYE-TDCPLNTAVITPLK-EFIILGGGQEAKDVTTTSAN 291 (369)
T ss_dssp EEECTTSS-EEEEEETTSEEEEEETTTC---------CEEEEEE-CSSCEEEEEECSSS-SEEEEEECCC----------
T ss_pred EEECCCCC-EEEEecCCceEEEEECCCC---------ceeeeec-CCCCceeEEecCCC-ceEEEeecCCCceEEEEecC
Confidence 99999765 8999999999999999986 5555555 78899999999998 8999998888
Q ss_pred ----cEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccc
Q 010748 428 ----MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 487 (502)
Q Consensus 428 ----~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~ 487 (502)
.+++||+.+++ .+..+.+|.+.|.+++|+|+++ +|++++.||.|+||++.++.....
T Consensus 292 ~~~~~i~~~d~~~~~--~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~v~iw~~~~~~~~~~ 352 (369)
T 3zwl_B 292 EGKFEARFYHKIFEE--EIGRVQGHFGPLNTVAISPQGT-SYASGGEDGFIRLHHFEKSYFDFK 352 (369)
T ss_dssp ---CEEEEEETTTCC--EEEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEEEECHHHHTCC
T ss_pred CCcceeEEEecCCCc--chhheecccCcEEEEEECCCCC-EEEEEcCCCeEEEEECccccchhH
Confidence 89999999987 5667788999999999999999 599999999999999987665433
No 43
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.8e-34 Score=284.65 Aligned_cols=270 Identities=20% Similarity=0.318 Sum_probs=211.5
Q ss_pred CcceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceee
Q 010748 192 FPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLG 271 (502)
Q Consensus 192 ~~~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 271 (502)
...|++| +|+|++||+|+ ++.++||++.++..+..+ ...... ..............+...|++
T Consensus 66 ~V~~v~f-------spdg~~la~g~-~~~v~i~~~~~g~~~~~l---~~~~~~------~~~~~~~~~~~~~~~~~~v~~ 128 (393)
T 1erj_A 66 VVCCVKF-------SNDGEYLATGC-NKTTQVYRVSDGSLVARL---SDDSAA------NKDPENLNTSSSPSSDLYIRS 128 (393)
T ss_dssp CCCEEEE-------CTTSSEEEEEC-BSCEEEEETTTCCEEEEE---CC-----------------------CCCCBEEE
T ss_pred EEEEEEE-------CCCCCEEEEEc-CCcEEEEEecCCCEEEEe---cCcccc------ccccccccccccCCCceeEEE
Confidence 3467777 89999999987 689999999876543221 110000 000000001111234456999
Q ss_pred EEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEee
Q 010748 272 LAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV 351 (502)
Q Consensus 272 l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 351 (502)
++|+|+ +.+|++|+.|++|+|||+.+++++..+.+|...|.+++|+|++ .+|++++.|++|++||++++.... ...+
T Consensus 129 v~~s~d-g~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~v~iwd~~~~~~~~-~~~~ 205 (393)
T 1erj_A 129 VCFSPD-GKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDLRTGQCSL-TLSI 205 (393)
T ss_dssp EEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEE-EEEC
T ss_pred EEECCC-CCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCC-CEEEEecCCCcEEEEECCCCeeEE-EEEc
Confidence 999999 5699999999999999999999999999999999999999999 899999999999999999876544 4456
Q ss_pred cCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEE-------eccCCCeeEEEEcCCCCCEEEEEe
Q 010748 352 AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-------HAHDKAVCTISYNPLVPNLLATGS 424 (502)
Q Consensus 352 ~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~-------~~h~~~v~~l~~sp~~~~~l~t~s 424 (502)
...+.+++|+|....++++|+.||.|++||++++ ..+..+ .+|...|.+++|+|++ .+|++|+
T Consensus 206 ~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~---------~~~~~~~~~~~~~~~h~~~v~~v~~~~~g-~~l~s~s 275 (393)
T 1erj_A 206 EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETG---------FLVERLDSENESGTGHKDSVYSVVFTRDG-QSVVSGS 275 (393)
T ss_dssp SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTC---------CEEEEEC------CCCSSCEEEEEECTTS-SEEEEEE
T ss_pred CCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCC---------cEEEeecccccCCCCCCCCEEEEEECCCC-CEEEEEe
Confidence 7889999999955568999999999999999876 334333 5799999999999998 8999999
Q ss_pred CCCcEEEEECCCCC----------eeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccccCC
Q 010748 425 TDKMVKLWDLSNNQ----------PSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKY 492 (502)
Q Consensus 425 ~dg~i~vwd~~~~~----------~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~~~~ 492 (502)
.|+.|++||+++.. ..+...+.+|...|.+++|+|++.+ |++|+.||.|++||+.++..+...-+|.
T Consensus 276 ~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~sgs~D~~v~iwd~~~~~~~~~l~~h~ 352 (393)
T 1erj_A 276 LDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEY-ILSGSKDRGVLFWDKKSGNPLLMLQGHR 352 (393)
T ss_dssp TTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCE-EEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred CCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCE-EEEEeCCCeEEEEECCCCeEEEEECCCC
Confidence 99999999997642 1245667789999999999999994 8999999999999999998876655543
No 44
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=9e-36 Score=294.03 Aligned_cols=250 Identities=22% Similarity=0.328 Sum_probs=210.5
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEE
Q 010748 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.|++| +|++++||+|+.||+|+|||+.+.. ....+..|...|.+++
T Consensus 70 ~~~~~-------sp~~~~l~s~s~D~~v~iWd~~~~~---------------------------~~~~~~~h~~~v~~~~ 115 (380)
T 3iz6_a 70 YSLDW-------TPEKNWIVSASQDGRLIVWNALTSQ---------------------------KTHAIKLHCPWVMECA 115 (380)
T ss_dssp EEEEE-------CTTSSCEEEEETTSEEEEEETTTTE---------------------------EEEEEECCCTTCCCCE
T ss_pred EEEEE-------cCCCCEEEEEeCCCeEEEEECCCCc---------------------------cceEEecCCCCEEEEE
Confidence 68887 7999999999999999999987532 2234457999999999
Q ss_pred eccCCCcEEEEEecCCcEEEEeCCCCe-------eeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCcc
Q 010748 274 WNKEFRNILASASADKQVKIWDVAAGK-------CNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG 346 (502)
Q Consensus 274 ~~~~~~~~l~sgs~dg~v~vwd~~~~~-------~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~ 346 (502)
|+|+ +.+|++|+.|+.|++|++.+.. ....+.+|.+.|.++.|+|.+...|++|+.|++|++||++++....
T Consensus 116 ~s~~-g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~ 194 (380)
T 3iz6_a 116 FAPN-GQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRIS 194 (380)
T ss_dssp ECTT-SSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEE
T ss_pred ECCC-CCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEE
Confidence 9999 5699999999999999987532 3456789999999999999876789999999999999999887654
Q ss_pred ce-----EeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEE
Q 010748 347 FK-----WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLA 421 (502)
Q Consensus 347 ~~-----~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~ 421 (502)
.. ..|...|.+++|++.+..++++|+.||.|++||++.. ...+..+.+|...|++++|+|++ .+|+
T Consensus 195 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~--------~~~~~~~~~h~~~v~~v~~~p~~-~~l~ 265 (380)
T 3iz6_a 195 IFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRIT--------SRAVRTYHGHEGDINSVKFFPDG-QRFG 265 (380)
T ss_dssp EECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTT--------CCCCEEECCCSSCCCEEEECTTS-SEEE
T ss_pred EeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCC--------CcceEEECCcCCCeEEEEEecCC-CeEE
Confidence 33 3577889999998866679999999999999999865 36778899999999999999998 8999
Q ss_pred EEeCCCcEEEEECCCCCeeEEEEecC-----CCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010748 422 TGSTDKMVKLWDLSNNQPSCIASRNP-----KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 422 t~s~dg~i~vwd~~~~~~~~~~~~~~-----~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~ 488 (502)
+|+.||+|++||+++++......... +...|++++|+|+++ +|++|+.||.|++||+.+++.+...
T Consensus 266 s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~dg~i~vwd~~~~~~~~~~ 336 (380)
T 3iz6_a 266 TGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGR-LLFAGYSNGDCYVWDTLLAEMVLNL 336 (380)
T ss_dssp EECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSS-EEEEECTTSCEEEEETTTCCEEEEE
T ss_pred EEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCC-EEEEEECCCCEEEEECCCCceEEEE
Confidence 99999999999999987433332211 223489999999999 5889999999999999988876554
No 45
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-34 Score=275.71 Aligned_cols=287 Identities=18% Similarity=0.225 Sum_probs=232.9
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEe
Q 010748 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g 215 (502)
..|...|.+++| |++++|++|+.++ .+.||.+..... ......| .....+++| +|++++|++|
T Consensus 15 ~~h~~~v~~~~~-~~~~~l~s~~~dg---~v~vw~~~~~~~--~~~~~~~----~~~v~~~~~-------~~~~~~l~~~ 77 (313)
T 3odt_A 15 KGHDQDVRDVVA-VDDSKVASVSRDG---TVRLWSKDDQWL--GTVVYTG----QGFLNSVCY-------DSEKELLLFG 77 (313)
T ss_dssp CCCSSCEEEEEE-EETTEEEEEETTS---EEEEEEESSSEE--EEEEEEC----SSCEEEEEE-------ETTTTEEEEE
T ss_pred hCCCCCcEEEEe-cCCCEEEEEEcCC---cEEEEECCCCEE--EEEeecC----CccEEEEEE-------CCCCCEEEEe
Confidence 358899999999 9999999999887 566666643321 1222223 334467777 6899999999
Q ss_pred cCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEe
Q 010748 216 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWD 295 (502)
Q Consensus 216 ~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd 295 (502)
+.+|.|++|++...... .....+.+|...|.+++|+ +.+|++|+.||.|++||
T Consensus 78 ~~dg~i~~~~~~~~~~~------------------------~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~~~d 130 (313)
T 3odt_A 78 GKDTMINGVPLFATSGE------------------------DPLYTLIGHQGNVCSLSFQ---DGVVISGSWDKTAKVWK 130 (313)
T ss_dssp ETTSCEEEEETTCCTTS------------------------CC-CEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEE
T ss_pred cCCCeEEEEEeeecCCC------------------------CcccchhhcccCEEEEEec---CCEEEEEeCCCCEEEEc
Confidence 99999999999753221 2223445799999999994 34899999999999999
Q ss_pred CCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEe-ecCCeeEEEeCCCCCCEEEEEeCC
Q 010748 296 VAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA-VAADVESLAWDPHAEHSFVVSLED 374 (502)
Q Consensus 296 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~~d 374 (502)
.++.+..+..|...|.++.|+|....+|++++.||.|++||... ....... +...+.+++|+|++. +++++.+
T Consensus 131 --~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~--~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~d 204 (313)
T 3odt_A 131 --EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK--VIKTFSGIHNDVVRHLAVVDDGH--FISCSND 204 (313)
T ss_dssp --TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE--EEEEECSSCSSCEEEEEEEETTE--EEEEETT
T ss_pred --CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc--eEEEEeccCcccEEEEEEcCCCe--EEEccCC
Confidence 77888889999999999999984448999999999999999432 2222223 778899999999764 8999999
Q ss_pred CcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCcEEE
Q 010748 375 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFS 454 (502)
Q Consensus 375 g~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~ 454 (502)
|.|++||+++. .++..+..|...|++++|+|++ .|++++.||.|++||+.+++ .+..+..|...|.+
T Consensus 205 g~i~i~d~~~~---------~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~i~~ 271 (313)
T 3odt_A 205 GLIKLVDMHTG---------DVLRTYEGHESFVYCIKLLPNG--DIVSCGEDRTVRIWSKENGS--LKQVITLPAISIWS 271 (313)
T ss_dssp SEEEEEETTTC---------CEEEEEECCSSCEEEEEECTTS--CEEEEETTSEEEEECTTTCC--EEEEEECSSSCEEE
T ss_pred CeEEEEECCch---------hhhhhhhcCCceEEEEEEecCC--CEEEEecCCEEEEEECCCCc--eeEEEeccCceEEE
Confidence 99999999986 7788889999999999999987 48899999999999999987 56667788889999
Q ss_pred EEEcCCCCcEEEEEeCCCcEEEEECCCCccccc
Q 010748 455 VAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 487 (502)
Q Consensus 455 ~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~ 487 (502)
++|+|++. +++++.||.|++|++.+++.+..
T Consensus 272 ~~~~~~~~--~~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 272 VDCMSNGD--IIVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp EEECTTSC--EEEEETTSCEEEEESCGGGCCC-
T ss_pred EEEccCCC--EEEEeCCCcEEEEeCCCCceeeh
Confidence 99999997 55689999999999998876654
No 46
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=7e-35 Score=283.75 Aligned_cols=247 Identities=23% Similarity=0.390 Sum_probs=205.0
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEE
Q 010748 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.+++| +|+|++||+|+.|+.|+||++...... .......+|...|.+++
T Consensus 20 ~~l~~-------sp~g~~las~~~D~~i~iw~~~~~~~~------------------------~~~~~~~~h~~~v~~~~ 68 (345)
T 3fm0_A 20 WFLAW-------NPAGTLLASCGGDRRIRIWGTEGDSWI------------------------CKSVLSEGHQRTVRKVA 68 (345)
T ss_dssp EEEEE-------CTTSSCEEEEETTSCEEEEEEETTEEE------------------------EEEEECSSCSSCEEEEE
T ss_pred EEEEE-------CCCCCEEEEEcCCCeEEEEEcCCCcce------------------------eeeeeccccCCcEEEEE
Confidence 56666 899999999999999999998643211 01112357999999999
Q ss_pred eccCCCcEEEEEecCCcEEEEeCCCC--eeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCc---cce
Q 010748 274 WNKEFRNILASASADKQVKIWDVAAG--KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS---GFK 348 (502)
Q Consensus 274 ~~~~~~~~l~sgs~dg~v~vwd~~~~--~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~---~~~ 348 (502)
|+|+ +.+|++|+.|++|++|++.++ +++..+.+|...|.+++|+|++ ++|++|+.|++|++||++..... ...
T Consensus 69 ~sp~-g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~-~~l~s~s~D~~v~iwd~~~~~~~~~~~~~ 146 (345)
T 3fm0_A 69 WSPC-GNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEEDEYECVSVL 146 (345)
T ss_dssp ECTT-SSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECTTSCEEEEEEE
T ss_pred ECCC-CCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCC-CEEEEEECCCeEEEEECCCCCCeEEEEEe
Confidence 9999 569999999999999998876 4678899999999999999998 89999999999999999876542 223
Q ss_pred EeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCc
Q 010748 349 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKM 428 (502)
Q Consensus 349 ~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~ 428 (502)
..|...|.+++|+|++. ++++++.|+.|++|+++... ..+...+.+|...|++++|+|++ .+|++|+.|++
T Consensus 147 ~~h~~~v~~~~~~p~~~-~l~s~s~d~~i~~w~~~~~~-------~~~~~~~~~h~~~v~~l~~sp~g-~~l~s~s~D~~ 217 (345)
T 3fm0_A 147 NSHTQDVKHVVWHPSQE-LLASASYDDTVKLYREEEDD-------WVCCATLEGHESTVWSLAFDPSG-QRLASCSDDRT 217 (345)
T ss_dssp CCCCSCEEEEEECSSSS-CEEEEETTSCEEEEEEETTE-------EEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSC
T ss_pred cCcCCCeEEEEECCCCC-EEEEEeCCCcEEEEEecCCC-------EEEEEEecCCCCceEEEEECCCC-CEEEEEeCCCe
Confidence 45778899999999865 79999999999999998652 13457788999999999999998 99999999999
Q ss_pred EEEEECCCCC-------------eeEEEEecC-CCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010748 429 VKLWDLSNNQ-------------PSCIASRNP-KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 429 i~vwd~~~~~-------------~~~~~~~~~-~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~ 483 (502)
|+||+..... ..++..+.+ |...|++++|+|++.. |++++.|+.|++|++..+.
T Consensus 218 v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~-l~s~~~d~~i~vw~~~~~~ 285 (345)
T 3fm0_A 218 VRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGA-LATACGDDAIRVFQEDPNS 285 (345)
T ss_dssp EEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCC-EEEEETTSCEEEEEECTTS
T ss_pred EEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCE-EEEEeCCCeEEEEEeCCCC
Confidence 9999963221 123444444 8889999999999994 9999999999999987654
No 47
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=9.3e-35 Score=284.98 Aligned_cols=306 Identities=11% Similarity=0.109 Sum_probs=217.7
Q ss_pred ccccccccCCCceEEEEEecCC----cceeEEEEEecCCCCC-CCeeeeeccccCC---CcceeeeecCCCCCCCCCCEE
Q 010748 141 DLEDMTINPNDAVIVCARNEDD----VSHLEVYILEESDGGD-PNLYVHHHIIIPA---FPLCMAWLDCPLKDREKGNFM 212 (502)
Q Consensus 141 ~v~~~~~~p~~~~l~~~~~~~~----~~~l~v~~~~~~~~~~-~~l~~~~~~~~~~---~~~~~~~~~~~~~~s~~~~~l 212 (502)
+|.+++|+|++++|++|+.+.. ...|++|.++...... ..+..++...+.. .++|+.+ +++.+
T Consensus 16 PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~---------~~~~~ 86 (365)
T 4h5i_A 16 PAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDA---------SKGII 86 (365)
T ss_dssp CEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEE---------ETTEE
T ss_pred CEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEe---------CCCEE
Confidence 6999999999999999975432 1247788776554310 0122233222222 2345543 45556
Q ss_pred EEe-----------cCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcE
Q 010748 213 AVG-----------SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNI 281 (502)
Q Consensus 213 a~g-----------~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~ 281 (502)
++| +.++.|++|++........... .........+...+.+++|+|++. +
T Consensus 87 ~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~v~fSpDg~-~ 147 (365)
T 4h5i_A 87 LVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLT------------------SVDFDASTNADDYTKLVYISREGT-V 147 (365)
T ss_dssp EEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEE------------------EECSSCCCCTTCCEEEEEECTTSS-C
T ss_pred EEEECCCccEEEEecCCCcEEEEEecCCCceEEEee------------------eeceeecCCcccCEEEEEEcCCCC-E
Confidence 554 4577899998865332111000 011112234556789999999955 5
Q ss_pred EE--EEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccc--eEeecCCeeE
Q 010748 282 LA--SASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF--KWAVAADVES 357 (502)
Q Consensus 282 l~--sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~--~~~~~~~v~~ 357 (502)
|+ +++.|++|+|||+.+++++..+. |...|.+|+|+|++ .+|++++. +.+++|+..++..... ...+...|.+
T Consensus 148 la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg-~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 224 (365)
T 4h5i_A 148 AAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDG-KVVAYITG-SSLEVISTVTGSCIARKTDFDKNWSLSK 224 (365)
T ss_dssp EEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTS-SEEEEECS-SCEEEEETTTCCEEEEECCCCTTEEEEE
T ss_pred EEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCC-ceEEeccc-eeEEEEEeccCcceeeeecCCCCCCEEE
Confidence 54 55579999999999999998886 77889999999999 88888875 5566776666554322 2345667999
Q ss_pred EEeCCCCCCEEEEEeCCC----cEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEE
Q 010748 358 LAWDPHAEHSFVVSLEDG----TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 433 (502)
Q Consensus 358 v~~~~~~~~~~~~~~~dg----~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd 433 (502)
++|+|++. ++++++.++ .+++|++...... ......+..|..+|++++|+|++ .+||+|+.|++|+|||
T Consensus 225 v~fspdg~-~l~~~s~d~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~~~~V~~~~~Spdg-~~lasgs~D~~V~iwd 297 (365)
T 4h5i_A 225 INFIADDT-VLIAASLKKGKGIVLTKISIKSGNTS-----VLRSKQVTNRFKGITSMDVDMKG-ELAVLASNDNSIALVK 297 (365)
T ss_dssp EEEEETTE-EEEEEEESSSCCEEEEEEEEETTEEE-----EEEEEEEESSCSCEEEEEECTTS-CEEEEEETTSCEEEEE
T ss_pred EEEcCCCC-EEEEEecCCcceeEEeecccccceec-----ceeeeeecCCCCCeEeEEECCCC-CceEEEcCCCEEEEEE
Confidence 99999876 677777666 6888998765210 12245677899999999999998 9999999999999999
Q ss_pred CCCCCeeEEEE-ecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccc
Q 010748 434 LSNNQPSCIAS-RNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 487 (502)
Q Consensus 434 ~~~~~~~~~~~-~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~ 487 (502)
+.+++ ++.. +.+|.++|++++|+||++ +||+|+.|++|+||++..+....+
T Consensus 298 ~~~~~--~~~~~~~gH~~~V~~v~fSpdg~-~laS~S~D~tvrvw~ip~~~~~~~ 349 (365)
T 4h5i_A 298 LKDLS--MSKIFKQAHSFAITEVTISPDST-YVASVSAANTIHIIKLPLNYANYT 349 (365)
T ss_dssp TTTTE--EEEEETTSSSSCEEEEEECTTSC-EEEEEETTSEEEEEECCTTTTC--
T ss_pred CCCCc--EEEEecCcccCCEEEEEECCCCC-EEEEEeCCCeEEEEEcCCCCcCcc
Confidence 99987 4555 478999999999999999 599999999999999976544333
No 48
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.9e-35 Score=297.23 Aligned_cols=290 Identities=14% Similarity=0.202 Sum_probs=214.1
Q ss_pred CCccccccccccCC-CceEEEEEecCCcceeEEEEEecCCCCCCCee--eeeccccCCCcceeeeecCCCCCCC-CCCEE
Q 010748 137 EDSEDLEDMTINPN-DAVIVCARNEDDVSHLEVYILEESDGGDPNLY--VHHHIIIPAFPLCMAWLDCPLKDRE-KGNFM 212 (502)
Q Consensus 137 ~~~~~v~~~~~~p~-~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~l 212 (502)
.|+..|++|+|+|+ +++||+|+.++ .+.||.+..... ..+. ..|. ....|++| +| ++++|
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg---~i~lWd~~~~~~--~~~~~~~gH~----~~V~~l~f-------~p~~~~~l 180 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGG---DIMLWNFGIKDK--PTFIKGIGAG----GSITGLKF-------NPLNTNQF 180 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTS---CEEEECSSCCSC--CEEECCCSSS----CCCCEEEE-------CSSCTTEE
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCC---EEEEEECCCCCc--eeEEEccCCC----CCEEEEEE-------eCCCCCEE
Confidence 46778999999995 57899999887 567776654432 1111 1232 23378888 55 68999
Q ss_pred EEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEE
Q 010748 213 AVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVK 292 (502)
Q Consensus 213 a~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~ 292 (502)
++|+.||+|+|||+..... ........+...+.+++|+|+ +.+|++|+.||.|+
T Consensus 181 ~s~s~D~~v~iwd~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~-~~~l~~g~~dg~i~ 234 (435)
T 4e54_B 181 YASSMEGTTRLQDFKGNIL-------------------------RVFASSDTINIWFCSLDVSAS-SRMVVTGDNVGNVI 234 (435)
T ss_dssp EEECSSSCEEEEETTSCEE-------------------------EEEECCSSCSCCCCCEEEETT-TTEEEEECSSSBEE
T ss_pred EEEeCCCEEEEeeccCCce-------------------------eEEeccCCCCccEEEEEECCC-CCEEEEEeCCCcEe
Confidence 9999999999999864211 111112245567899999999 56999999999999
Q ss_pred EEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCcc---ceEeecCCeeEEEeCCCCCCEEE
Q 010748 293 IWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG---FKWAVAADVESLAWDPHAEHSFV 369 (502)
Q Consensus 293 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~---~~~~~~~~v~~v~~~~~~~~~~~ 369 (502)
+||+. ++.+..+.+|...|++++|+|.+..+|++|+.|++|++||+++..... ....|...|.+++|+|++. +|+
T Consensus 235 ~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~-~l~ 312 (435)
T 4e54_B 235 LLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGA-RLL 312 (435)
T ss_dssp EEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSS-EEE
T ss_pred eeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCC-eeE
Confidence 99986 567788899999999999999997799999999999999998866433 2346788999999999875 899
Q ss_pred EEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCC------CeeEEEEcCCCCCEEEEEe------------CCCcEEE
Q 010748 370 VSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDK------AVCTISYNPLVPNLLATGS------------TDKMVKL 431 (502)
Q Consensus 370 ~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~------~v~~l~~sp~~~~~l~t~s------------~dg~i~v 431 (502)
+++.||.|++||+++. .....+..|.. .+..+.|+|.+ .++++++ .++.|++
T Consensus 313 s~~~D~~i~iwd~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~i~i 382 (435)
T 4e54_B 313 TTDQKSEIRVYSASQW---------DCPLGLIPHPHRHFQHLTPIKAAWHPRY-NLIVVGRYPDPNFKSCTPYELRTIDV 382 (435)
T ss_dssp EEESSSCEEEEESSSS---------SSEEEECCCCCCCCSSSCCCBCEECSSS-SCEEEECCCCTTSCCSSTTCCCCEEE
T ss_pred EEcCCCEEEEEECCCC---------ccceEEecccccccccceeEEEEEcCCC-CEEEEEEcCCCCeEEEEecCCCEEEE
Confidence 9999999999999986 33444444332 23344566655 4444443 3467999
Q ss_pred EECCCCCeeEEEE-ecCCCCcEEEE-EEcCCCCcEEEEEeCCCcEEEEECCCCcc
Q 010748 432 WDLSNNQPSCIAS-RNPKAGAVFSV-AFSEDSPFVLAIGGSKGKLEIWDTLSDAG 484 (502)
Q Consensus 432 wd~~~~~~~~~~~-~~~~~~~v~~~-~~spd~~~ll~sg~~dg~i~vwd~~~~~~ 484 (502)
||..+++. +.. ..+|...|.++ +|+|+|.+ |++|+ |+.|+||++.+++.
T Consensus 383 wd~~~g~~--~~~l~~~~~~~v~s~~~fspdg~~-lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 383 FDGNSGKM--MCQLYDPESSGISSLNEFNPMGDT-LASAM-GYHILIWSQQEART 433 (435)
T ss_dssp ECSSSCCE--EEEECCSSCCCCCCEEEECTTSSC-EEEEC-SSEEEECCCC----
T ss_pred EECCCCcE--EEEEeCCCCCcEEEEEEECCCCCE-EEEEc-CCcEEEEECCcCee
Confidence 99999874 333 35677888887 69999984 77765 88999999988764
No 49
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.1e-34 Score=306.77 Aligned_cols=287 Identities=19% Similarity=0.323 Sum_probs=223.7
Q ss_pred CCccccccccccCCC-ceEEEEEecCCcceeEEEEEecCCCCCC---CeeeeeccccCCCcceeeeecCCCCCCCCCCEE
Q 010748 137 EDSEDLEDMTINPND-AVIVCARNEDDVSHLEVYILEESDGGDP---NLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFM 212 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~-~~l~~~~~~~~~~~l~v~~~~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l 212 (502)
.|.+.|.+++|+|++ ++|++|+.++ .++||.+........ .....|. ....|+.| +|++++|
T Consensus 380 ~H~~~V~~v~~~~~~~~~l~s~s~D~---~i~~W~~~~~~~~~~~~~~~~~~h~----~~v~~v~~-------s~~g~~l 445 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNADIIVSASRDK---SIILWKLTKDDKAYGVAQRRLTGHS----HFVEDVVL-------SSDGQFA 445 (694)
T ss_dssp CCSSCEEEEECCTTCCSEEEEEETTS---EEEEEECCCSTTCSCEEEEEEECCS----SCEEEEEE-------CTTSSEE
T ss_pred cCCceeEEEEecCCCCCEEEEEeCCC---cEEEEEccCCCcccccccceecCCC----CcEEEEEE-------CCCCCEE
Confidence 589999999999975 6888998886 677777664432100 0112222 22356666 7999999
Q ss_pred EEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEE
Q 010748 213 AVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVK 292 (502)
Q Consensus 213 a~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~ 292 (502)
++|+.||.|+|||+.++.. ...+.+|...|++++|+|+ +.+|++|+.|++|+
T Consensus 446 ~sgs~Dg~v~vwd~~~~~~---------------------------~~~~~~h~~~v~~~~~s~~-~~~l~s~s~D~~i~ 497 (694)
T 3dm0_A 446 LSGSWDGELRLWDLAAGVS---------------------------TRRFVGHTKDVLSVAFSLD-NRQIVSASRDRTIK 497 (694)
T ss_dssp EEEETTSEEEEEETTTTEE---------------------------EEEEECCSSCEEEEEECTT-SSCEEEEETTSCEE
T ss_pred EEEeCCCcEEEEECCCCcc---------------------------eeEEeCCCCCEEEEEEeCC-CCEEEEEeCCCEEE
Confidence 9999999999999975322 2245589999999999999 56899999999999
Q ss_pred EEeCCCCeeeEee---ccCCCCeEEEEEcCCCC-cEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEE
Q 010748 293 IWDVAAGKCNLTL---EHHTDKVQAVAWNHHSP-QILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSF 368 (502)
Q Consensus 293 vwd~~~~~~~~~~---~~h~~~v~~l~~~~~~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~ 368 (502)
+||+......... .+|...|.+++|+|++. .+|++|+.|++|++||+++.+.......|...|.+++|+|++. ++
T Consensus 498 iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~-~l 576 (694)
T 3dm0_A 498 LWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGS-LC 576 (694)
T ss_dssp EECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS-EE
T ss_pred EEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCC-EE
Confidence 9998755433322 46889999999999863 5899999999999999998887766678899999999999865 89
Q ss_pred EEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecC-
Q 010748 369 VVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNP- 447 (502)
Q Consensus 369 ~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~- 447 (502)
++|+.||.|++||++++ ..+..+. +...|.+++|+|++ .+|++++ ++.|+|||+.++.. +..+..
T Consensus 577 ~sg~~Dg~i~iwd~~~~---------~~~~~~~-~~~~v~~~~~sp~~-~~l~~~~-~~~i~iwd~~~~~~--~~~~~~~ 642 (694)
T 3dm0_A 577 ASGGKDGVVLLWDLAEG---------KKLYSLE-ANSVIHALCFSPNR-YWLCAAT-EHGIKIWDLESKSI--VEDLKVD 642 (694)
T ss_dssp EEEETTSBCEEEETTTT---------EEEECCB-CSSCEEEEEECSSS-SEEEEEE-TTEEEEEETTTTEE--EEEECCC
T ss_pred EEEeCCCeEEEEECCCC---------ceEEEec-CCCcEEEEEEcCCC-cEEEEEc-CCCEEEEECCCCCC--hhhhccc
Confidence 99999999999999986 4455444 45679999999987 7776665 56699999998763 222221
Q ss_pred ------------------CCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010748 448 ------------------KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 448 ------------------~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~ 481 (502)
+...+++++|+|+++ +|++|+.||.|+||++..
T Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~-~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 643 LKAEAEKADNSGPAATKRKVIYCTSLNWSADGS-TLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp CC----------------CCCCEEEEEECTTSS-EEEEEETTSEEEEEEC--
T ss_pred cccccccccccccccCCceeEEeeeEEEcCCCC-EEEEEcCCCeEEEEeccC
Confidence 122478999999999 599999999999999853
No 50
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.6e-36 Score=294.34 Aligned_cols=293 Identities=11% Similarity=0.181 Sum_probs=215.0
Q ss_pred CccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC
Q 010748 138 DSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM 217 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~ 217 (502)
+...|.+++|+|++++|++|+.++ .+.||............+..|. ....+++| +|++++|++|+.
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~---~i~iw~~~~~~~~~~~~~~~h~----~~v~~~~~-------s~~~~~l~s~s~ 75 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATN---QVELYEQDGNGWKHARTFSDHD----KIVTCVDW-------APKSNRIVTCSQ 75 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSS---CBCEEEEETTEEEECCCBCCCS----SCEEEEEE-------CTTTCCEEEEET
T ss_pred CCCcEEEEEECCCCCEEEEecCCC---EEEEEEccCCceEEEEEEecCC----ceEEEEEE-------eCCCCEEEEEeC
Confidence 356899999999999999998776 5688887754200111222232 22367777 789999999999
Q ss_pred CCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeCC
Q 010748 218 EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVA 297 (502)
Q Consensus 218 dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~ 297 (502)
|+.|+|||+...... .....+.+|...|.+++|+|+ +.+|++|+.|++|++||+.
T Consensus 76 d~~v~vwd~~~~~~~------------------------~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~ 130 (377)
T 3dwl_C 76 DRNAYVYEKRPDGTW------------------------KQTLVLLRLNRAATFVRWSPN-EDKFAVGSGARVISVCYFE 130 (377)
T ss_dssp TSSEEEC------CC------------------------CCEEECCCCSSCEEEEECCTT-SSCCEEEESSSCEEECCC-
T ss_pred CCeEEEEEcCCCCce------------------------eeeeEecccCCceEEEEECCC-CCEEEEEecCCeEEEEEEC
Confidence 999999999764311 122334579999999999998 5699999999999999999
Q ss_pred CCe---eeEeecc-CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCC------------------CccceEeecCCe
Q 010748 298 AGK---CNLTLEH-HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST------------------HSGFKWAVAADV 355 (502)
Q Consensus 298 ~~~---~~~~~~~-h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~------------------~~~~~~~~~~~v 355 (502)
+++ +...+.. |...|++++|+|++ .+|++++.|+.|++||++... ..... .|...|
T Consensus 131 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v 208 (377)
T 3dwl_C 131 QENDWWVSKHLKRPLRSTILSLDWHPNN-VLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWV 208 (377)
T ss_dssp ----CCCCEEECSSCCSCEEEEEECTTS-SEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSE
T ss_pred CcccceeeeEeecccCCCeEEEEEcCCC-CEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceE
Confidence 887 4777777 99999999999998 899999999999999986322 12222 677889
Q ss_pred eEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECC
Q 010748 356 ESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLS 435 (502)
Q Consensus 356 ~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~ 435 (502)
.+++|+|++. ++++++.||.|++||+++.... ...+..+..|...|.+++|+|++ .+|++|+.++.+ +|+..
T Consensus 209 ~~~~~sp~~~-~l~~~~~d~~i~iwd~~~~~~~-----~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 209 HAVGFSPSGN-ALAYAGHDSSVTIAYPSAPEQP-----PRALITVKLSQLPLRSLLWANES-AIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp EEEEECTTSS-CEEEEETTTEEC-CEECSTTSC-----EEECCCEECSSSCEEEEEEEETT-EEEEEESSSSEE-EECCC
T ss_pred EEEEECCCCC-EEEEEeCCCcEEEEECCCCCCc-----ceeeEeecCCCCceEEEEEcCCC-CEEEEEcCCcEE-EEEeC
Confidence 9999999876 7999999999999999987210 01267788999999999999998 888888766655 77665
Q ss_pred CCCee-------------------------------------EEE-------------EecCCCCcEEEEEEcCCCCc--
Q 010748 436 NNQPS-------------------------------------CIA-------------SRNPKAGAVFSVAFSEDSPF-- 463 (502)
Q Consensus 436 ~~~~~-------------------------------------~~~-------------~~~~~~~~v~~~~~spd~~~-- 463 (502)
..... ... ....|.+.|+++++.+....
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~ 360 (377)
T 3dwl_C 281 ESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNI 360 (377)
T ss_dssp C---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEE
T ss_pred CCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCce
Confidence 21100 000 01238899999998765543
Q ss_pred -EEEEEeCCCcEEEEEC
Q 010748 464 -VLAIGGSKGKLEIWDT 479 (502)
Q Consensus 464 -ll~sg~~dg~i~vwd~ 479 (502)
.|+|||.||.|+|||+
T Consensus 361 ~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 361 TAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp EEEEEEETTSEEEEECC
T ss_pred EEEEeecCCCcEEEecC
Confidence 5999999999999985
No 51
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-34 Score=289.17 Aligned_cols=298 Identities=12% Similarity=0.167 Sum_probs=234.6
Q ss_pred CccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC
Q 010748 138 DSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM 217 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~ 217 (502)
|...|.+++|+|++++|++|+.++ .+.+|. .... ....+..| .....++.| +|++++|++++.
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg---~i~i~~--~~~~-~~~~~~~~----~~~v~~~~~-------~~~~~~l~~~~~ 169 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENG---ELRLWN--KTGA-LLNVLNFH----RAPIVSVKW-------NKDGTHIISMDV 169 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTS---CEEEEE--TTSC-EEEEECCC----CSCEEEEEE-------CTTSSEEEEEET
T ss_pred CCCceEEEEEcCCCCEEEEEeCCC---eEEEEe--CCCC-eeeeccCC----CccEEEEEE-------CCCCCEEEEEec
Confidence 577999999999999999999887 445554 2222 11111222 233467777 789999999999
Q ss_pred CCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeCC
Q 010748 218 EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVA 297 (502)
Q Consensus 218 dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~ 297 (502)
+|.|++|++.+............ ............+...|.+++|+|+ + .+++++.+|.|++||+.
T Consensus 170 d~~i~iwd~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~g~i~~~d~~ 235 (425)
T 1r5m_A 170 ENVTILWNVISGTVMQHFELKET------------GGSSINAENHSGDGSLGVDVEWVDD-D-KFVIPGPKGAIFVYQIT 235 (425)
T ss_dssp TCCEEEEETTTTEEEEEECCC---------------------------CCCBSCCEEEET-T-EEEEECGGGCEEEEETT
T ss_pred CCeEEEEECCCCcEEEEeecccc------------CccceeeccccCCcceeeEEEEcCC-C-EEEEEcCCCeEEEEEcC
Confidence 99999999976543322110000 0000000011122333999999997 3 68999999999999999
Q ss_pred CCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEEEEEeCCCcE
Q 010748 298 AGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTI 377 (502)
Q Consensus 298 ~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v 377 (502)
+++.+..+..|...|.+++|+|++ .+|++++.||.|++||+++.........+...+.+++|+|++ ++++++.+|.|
T Consensus 236 ~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i 312 (425)
T 1r5m_A 236 EKTPTGKLIGHHGPISVLEFNDTN-KLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD--KVISCSMDGSV 312 (425)
T ss_dssp CSSCSEEECCCSSCEEEEEEETTT-TEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT--EEEEEETTSEE
T ss_pred CCceeeeeccCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC--EEEEEeCCCcE
Confidence 999999999999999999999999 899999999999999999888777666788999999999976 89999999999
Q ss_pred EEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCe------------------
Q 010748 378 KGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP------------------ 439 (502)
Q Consensus 378 ~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~------------------ 439 (502)
++||+++. ..+..+..|...|.+++|+|++ .+|++++.||.|++||+.+...
T Consensus 313 ~i~d~~~~---------~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (425)
T 1r5m_A 313 RLWSLKQN---------TLLALSIVDGVPIFAGRISQDG-QKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPI 382 (425)
T ss_dssp EEEETTTT---------EEEEEEECTTCCEEEEEECTTS-SEEEEEETTSCEEEEECHHHHC--------------CEEC
T ss_pred EEEECCCC---------cEeEecccCCccEEEEEEcCCC-CEEEEEECCCeEEEEECCCCccceeeeecccccccCcccc
Confidence 99999886 7788888999999999999998 8999999999999999987550
Q ss_pred eEEEEecCCCC--cEEEEEEcCCCCcEEEEEeCCCcEEEEECC
Q 010748 440 SCIASRNPKAG--AVFSVAFSEDSPFVLAIGGSKGKLEIWDTL 480 (502)
Q Consensus 440 ~~~~~~~~~~~--~v~~~~~spd~~~ll~sg~~dg~i~vwd~~ 480 (502)
..+..+..|.. .|++++|+|+++ +|++++.||.|++|++.
T Consensus 383 ~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 383 PLYASYQSSQDNDYIFDLSWNCAGN-KISVAYSLQEGSVVAIP 424 (425)
T ss_dssp CEEEEECCTTCCCCEEEEEECTTSS-EEEEEESSSCCEEEECC
T ss_pred hhhhhhcCcccCCceEEEEccCCCc-eEEEEecCceEEEEeec
Confidence 14667777866 999999999999 58899999999999985
No 52
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.4e-34 Score=274.65 Aligned_cols=249 Identities=25% Similarity=0.412 Sum_probs=210.4
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEE
Q 010748 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.+++| +|++++||+|+.||.|+||++..+. ....+.+|...|.+++
T Consensus 27 ~~~~~-------s~~~~~l~s~~~dg~i~iw~~~~~~---------------------------~~~~~~~h~~~v~~~~ 72 (312)
T 4ery_A 27 SSVKF-------SPNGEWLASSSADKLIKIWGAYDGK---------------------------FEKTISGHKLGISDVA 72 (312)
T ss_dssp EEEEE-------CTTSSEEEEEETTSCEEEEETTTCC---------------------------EEEEECCCSSCEEEEE
T ss_pred EEEEE-------CCCCCEEEEeeCCCeEEEEeCCCcc---------------------------cchhhccCCCceEEEE
Confidence 67777 7999999999999999999986532 1223457999999999
Q ss_pred eccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecC
Q 010748 274 WNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAA 353 (502)
Q Consensus 274 ~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~ 353 (502)
|+|+ +++|++|+.|+.|++||+.+++++..+.+|...|.++.|+|++ .+|++|+.|+.|++||+++.+.......+..
T Consensus 73 ~~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 150 (312)
T 4ery_A 73 WSSD-SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSD 150 (312)
T ss_dssp ECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred EcCC-CCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCEEEEEecCCCC
Confidence 9999 5699999999999999999999999999999999999999998 8999999999999999998877666667888
Q ss_pred CeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEE-eccCCCeeEEEEcCCCCCEEEEEeCCCcEEEE
Q 010748 354 DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 432 (502)
Q Consensus 354 ~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vw 432 (502)
.|.+++|+|++. ++++++.||.|++||+++. ..+..+ ..+...+.+++|+|++ .+|++++.|+.|++|
T Consensus 151 ~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~---------~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~iw 219 (312)
T 4ery_A 151 PVSAVHFNRDGS-LIVSSSYDGLCRIWDTASG---------QCLKTLIDDDNPPVSFVKFSPNG-KYILAATLDNTLKLW 219 (312)
T ss_dssp CEEEEEECTTSS-EEEEEETTSCEEEEETTTC---------CEEEEECCSSCCCEEEEEECTTS-SEEEEEETTTEEEEE
T ss_pred cEEEEEEcCCCC-EEEEEeCCCcEEEEECCCC---------ceeeEEeccCCCceEEEEECCCC-CEEEEEcCCCeEEEE
Confidence 999999999765 8999999999999999986 444444 4567789999999998 899999999999999
Q ss_pred ECCCCCeeEEEEecCCCCcE--EEEEEc-CCCCcEEEEEeCCCcEEEEECCCCccccccccCC
Q 010748 433 DLSNNQPSCIASRNPKAGAV--FSVAFS-EDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKY 492 (502)
Q Consensus 433 d~~~~~~~~~~~~~~~~~~v--~~~~~s-pd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~~~~ 492 (502)
|+.+++ ++..+.+|...+ ....++ +++. +|++|+.||.|++||+.+++.+....+|.
T Consensus 220 d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~h~ 279 (312)
T 4ery_A 220 DYSKGK--CLKTYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWNLQTKEIVQKLQGHT 279 (312)
T ss_dssp ETTTTE--EEEEECSSCCSSSCCCEEEECSSSC-EEEECCTTSCEEEEETTTCCEEEEECCCS
T ss_pred ECCCCc--EEEEEEecCCceEEEEEEEEeCCCc-EEEEECCCCEEEEEECCCchhhhhhhccC
Confidence 999887 455666665432 223444 5566 69999999999999999998887665553
No 53
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.7e-34 Score=276.46 Aligned_cols=248 Identities=19% Similarity=0.268 Sum_probs=207.4
Q ss_pred ceeeeecCCCCCCCC-CCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeE
Q 010748 194 LCMAWLDCPLKDREK-GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL 272 (502)
Q Consensus 194 ~~~~~~~~~~~~s~~-~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 272 (502)
.+++| +|+ +++|++|+.|++|++|++...... .......+.+|...|.++
T Consensus 21 ~~l~~-------~~~~~~~l~s~s~D~~v~~W~~~~~~~~----------------------~~~~~~~~~~h~~~v~~~ 71 (319)
T 3frx_A 21 TSLAT-------SAGQPNLLLSASRDKTLISWKLTGDDQK----------------------FGVPVRSFKGHSHIVQDC 71 (319)
T ss_dssp EEEEE-------CSSCTTEEEEEETTSEEEEEEEEEETTE----------------------EEEEEEEEECCSSCEEEE
T ss_pred EEEEc-------cCCCccEEEEecCCccEEEecCCCCCcc----------------------ccccceEEeCCcccEEEE
Confidence 57776 564 589999999999999998632211 122334566899999999
Q ss_pred EeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeec
Q 010748 273 AWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVA 352 (502)
Q Consensus 273 ~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~ 352 (502)
+|+|+ +.+|++|+.|++|++||+.+++++..+.+|...|.+++|+|++ .+|++|+.|++|++||++.. .......|.
T Consensus 72 ~~s~d-g~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~vwd~~~~-~~~~~~~h~ 148 (319)
T 3frx_A 72 TLTAD-GAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKA-SMIISGSRDKTIKVWTIKGQ-CLATLLGHN 148 (319)
T ss_dssp EECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS-CEEEEEETTSCEEEEETTSC-EEEEECCCS
T ss_pred EECCC-CCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCC-eEEEEeccC
Confidence 99999 5699999999999999999999999999999999999999998 89999999999999999754 334455788
Q ss_pred CCeeEEEeCCCC-----CCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCC
Q 010748 353 ADVESLAWDPHA-----EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK 427 (502)
Q Consensus 353 ~~v~~v~~~~~~-----~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg 427 (502)
..|.++.|.|.. ...+++++.|+.|++||+++. .....+.+|...|++++|+|++ .+|++|+.||
T Consensus 149 ~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~---------~~~~~~~~h~~~v~~~~~sp~g-~~l~s~~~dg 218 (319)
T 3frx_A 149 DWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF---------QIEADFIGHNSNINTLTASPDG-TLIASAGKDG 218 (319)
T ss_dssp SCEEEEEECCC------CCEEEEEETTSCEEEEETTTT---------EEEEEECCCCSCEEEEEECTTS-SEEEEEETTC
T ss_pred CcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc---------hhheeecCCCCcEEEEEEcCCC-CEEEEEeCCC
Confidence 899999999853 337999999999999999876 6777888999999999999998 9999999999
Q ss_pred cEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010748 428 MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 428 ~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~ 488 (502)
.|++||+.+++ ++..+..+ ..|.+++|+|++. +|++++. +.+++|++.....+...
T Consensus 219 ~i~iwd~~~~~--~~~~~~~~-~~v~~~~~sp~~~-~la~~~~-~~i~v~~~~~~~~~~~~ 274 (319)
T 3frx_A 219 EIMLWNLAAKK--AMYTLSAQ-DEVFSLAFSPNRY-WLAAATA-TGIKVFSLDPQYLVDDL 274 (319)
T ss_dssp EEEEEETTTTE--EEEEEECC-SCEEEEEECSSSS-EEEEEET-TEEEEEEETTEEEEEEE
T ss_pred eEEEEECCCCc--EEEEecCC-CcEEEEEEcCCCC-EEEEEcC-CCcEEEEeCcCeeeecc
Confidence 99999999887 44455443 6799999999998 4776665 46999999877655443
No 54
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.2e-33 Score=280.73 Aligned_cols=290 Identities=21% Similarity=0.348 Sum_probs=226.3
Q ss_pred cccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCC
Q 010748 140 EDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEP 219 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~dg 219 (502)
-..+.|.|+++ ++|++|. ++ .|++|+...+....++..+ .......|++| +|+|++||+|+.||
T Consensus 106 ~y~~~l~wS~~-n~lAvgl-d~-----tV~lWd~~tg~~~~~~~~~--~~~~~V~sv~f-------spdg~~lasgs~Dg 169 (420)
T 4gga_A 106 YYLNLVDWSSG-NVLAVAL-DN-----SVYLWSASSGDILQLLQME--QPGEYISSVAW-------IKEGNYLAVGTSSA 169 (420)
T ss_dssp TTCBCEEECTT-SEEEEEE-TT-----EEEEEETTTCCEEEEEECC--STTCCEEEEEE-------CTTSSEEEEEETTS
T ss_pred ccceeEEECCC-CEEEEEe-CC-----EEEEEECCCCCEEEEEEec--CCCCcEEEEEE-------CCCCCEEEEEECCC
Confidence 34677999975 5777775 55 5555555544111111111 11233478888 79999999999999
Q ss_pred cEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeCCCC
Q 010748 220 AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG 299 (502)
Q Consensus 220 ~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~ 299 (502)
.|+|||+.++. ....+.+|...|.+++|++ .+|++|+.|+.+++||....
T Consensus 170 ~v~iWd~~~~~---------------------------~~~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~ 219 (420)
T 4gga_A 170 EVQLWDVQQQK---------------------------RLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVA 219 (420)
T ss_dssp CEEEEETTTTE---------------------------EEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSS
T ss_pred eEEEEEcCCCc---------------------------EEEEEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeeccc
Confidence 99999997633 2234558999999999875 48999999999999998864
Q ss_pred -eeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCc----cceEeecCCeeEEEeCCCCCCEEEEE--e
Q 010748 300 -KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS----GFKWAVAADVESLAWDPHAEHSFVVS--L 372 (502)
Q Consensus 300 -~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~----~~~~~~~~~v~~v~~~~~~~~~~~~~--~ 372 (502)
..+..+.+|...+.++.|+|.+ .++++++.|+.+++|+.+..... .....+...|.+++|+|.+..+++++ +
T Consensus 220 ~~~~~~~~~h~~~~~~~~~~~~g-~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs 298 (420)
T 4gga_A 220 EHHVATLSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGT 298 (420)
T ss_dssp SCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECT
T ss_pred ceeeEEecccccceeeeeecCCC-CeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeec
Confidence 5567889999999999999999 89999999999999999876532 23446778899999999988887764 4
Q ss_pred CCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEe--CCCcEEEEECCCCCeeEEEEecCCCC
Q 010748 373 EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS--TDKMVKLWDLSNNQPSCIASRNPKAG 450 (502)
Q Consensus 373 ~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s--~dg~i~vwd~~~~~~~~~~~~~~~~~ 450 (502)
.|+.|++||++++ .+...+.. ...+.++.|+|++ ..+++++ .|+.|+|||+.+++ ++..+.+|.+
T Consensus 299 ~D~~I~iwd~~t~---------~~~~~~~~-~~~v~~~~~~~~~-~~lv~~sg~~d~~I~iwd~~~~~--~v~~l~gH~~ 365 (420)
T 4gga_A 299 SDRHIRIWNVCSG---------ACLSAVDA-HSQVCSILWSPHY-KELISGHGFAQNQLVIWKYPTMA--KVAELKGHTS 365 (420)
T ss_dssp TTCEEEEEETTTT---------EEEEEEEC-SSCEEEEEEETTT-TEEEEEECTTTCCEEEEETTTCC--EEEEECCCSS
T ss_pred CCCEEEEEeCCcc---------ccceeecc-ccceeeeeecCCC-CeEEEEEecCCCEEEEEECCCCc--EEEEEcCCCC
Confidence 7999999999986 55666654 4568999999998 5665544 68999999999988 6778899999
Q ss_pred cEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccccc
Q 010748 451 AVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFS 490 (502)
Q Consensus 451 ~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~~ 490 (502)
.|++++|+|++.+ |+||+.||+|+|||+......++.-.
T Consensus 366 ~V~~l~~spdg~~-l~S~s~D~tvriWdv~~~~~~~~~~~ 404 (420)
T 4gga_A 366 RVLSLTMSPDGAT-VASAAADETLRLWRCFELDPARRRER 404 (420)
T ss_dssp CEEEEEECTTSSC-EEEEETTTEEEEECCSCSSCC-----
T ss_pred CEEEEEEcCCCCE-EEEEecCCeEEEEECCCCCccchhhh
Confidence 9999999999995 99999999999999988766554433
No 55
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=7.7e-34 Score=276.16 Aligned_cols=243 Identities=21% Similarity=0.292 Sum_probs=196.9
Q ss_pred CCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEe
Q 010748 207 EKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS 286 (502)
Q Consensus 207 ~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs 286 (502)
+++++||+|+.|++|+||++....... ........+.+|...|.+++|+|+ +.+|++|+
T Consensus 37 ~d~~~l~sgs~D~~v~iWd~~~~~~~~--------------------~~~~~~~~l~~h~~~V~~~~~~~~-~~~l~s~s 95 (343)
T 2xzm_R 37 EDSPVLISGSRDKTVMIWKLYEEEQNG--------------------YFGIPHKALTGHNHFVSDLALSQE-NCFAISSS 95 (343)
T ss_dssp CCCCEEEEEETTSCEEEEEECSSCCSS--------------------BSEEEEEEECCCSSCEEEEEECSS-TTEEEEEE
T ss_pred CCCCEEEEEcCCCEEEEEECCcCCccc--------------------ccccccchhccCCCceEEEEECCC-CCEEEEEc
Confidence 489999999999999999987532211 011223356689999999999999 56999999
Q ss_pred cCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccc--eEeecCCeeEEEeCCCC
Q 010748 287 ADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF--KWAVAADVESLAWDPHA 364 (502)
Q Consensus 287 ~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~--~~~~~~~v~~v~~~~~~ 364 (502)
.|++|++||+.+++++..+.+|...|.+++|+|++ .+|++++.|++|++||++....... ...+...|.+++|+|.+
T Consensus 96 ~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~-~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 174 (343)
T 2xzm_R 96 WDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDN-RQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIM 174 (343)
T ss_dssp TTSEEEEEETTSSCEEEEEECCCSCEEEEEECSST-TEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCC
T ss_pred CCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCC-CEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeecccc
Confidence 99999999999999999999999999999999999 8999999999999999974322111 11567789999999976
Q ss_pred C---------CEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECC
Q 010748 365 E---------HSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLS 435 (502)
Q Consensus 365 ~---------~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~ 435 (502)
. .++++++.||.|++||.+ ......+.+|...|++++|+|++ .+|++|+.||.|++||+.
T Consensus 175 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~----------~~~~~~~~~h~~~v~~~~~s~~g-~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 175 KSANKVQPFAPYFASVGWDGRLKVWNTN----------FQIRYTFKAHESNVNHLSISPNG-KYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp CSCSCCCSSCCEEEEEETTSEEEEEETT----------TEEEEEEECCSSCEEEEEECTTS-SEEEEEETTCEEEEEESS
T ss_pred ccccccCCCCCEEEEEcCCCEEEEEcCC----------CceeEEEcCccccceEEEECCCC-CEEEEEcCCCeEEEEECC
Confidence 2 489999999999999943 25667888999999999999998 999999999999999995
Q ss_pred CCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccc
Q 010748 436 NNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 436 ~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~ 486 (502)
.... ....+ .+...|.+++|+|++. +|+ ++.++.|++|++.++....
T Consensus 244 ~~~~-~~~~~-~~~~~v~~v~~sp~~~-~la-~~~d~~v~iw~~~~~~~~~ 290 (343)
T 2xzm_R 244 NLTY-PQREF-DAGSTINQIAFNPKLQ-WVA-VGTDQGVKIFNLMTQSKAP 290 (343)
T ss_dssp CCSS-CSEEE-ECSSCEEEEEECSSSC-EEE-EEESSCEEEEESSSCCSCS
T ss_pred CCcc-cceee-cCCCcEEEEEECCCCC-EEE-EECCCCEEEEEeCCCCCCc
Confidence 4332 12222 2345799999999997 455 4567889999998876543
No 56
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.6e-35 Score=281.39 Aligned_cols=249 Identities=22% Similarity=0.326 Sum_probs=199.9
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEE
Q 010748 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.+++| +|+|++||+|+.|++|+|||+..+. ......+.+|...|++++
T Consensus 17 ~~v~~-------s~~g~~lasgs~D~~v~lwd~~~~~-------------------------~~~~~~l~gH~~~V~~v~ 64 (316)
T 3bg1_A 17 HDAQM-------DYYGTRLATCSSDRSVKIFDVRNGG-------------------------QILIADLRGHEGPVWQVA 64 (316)
T ss_dssp EEEEE-------CGGGCEEEEEETTTEEEEEEEETTE-------------------------EEEEEEEECCSSCEEEEE
T ss_pred EEeeE-------cCCCCEEEEEeCCCeEEEEEecCCC-------------------------cEEEEEEcCCCccEEEEE
Confidence 57776 7899999999999999999986421 112234568999999999
Q ss_pred eccC-CCcEEEEEecCCcEEEEeCCCC--eeeEeeccCCCCeEEEEEcCCC-CcEEEEEeCCCcEEEEecCCCCC---cc
Q 010748 274 WNKE-FRNILASASADKQVKIWDVAAG--KCNLTLEHHTDKVQAVAWNHHS-PQILLSGSFDRSVVMKDARISTH---SG 346 (502)
Q Consensus 274 ~~~~-~~~~l~sgs~dg~v~vwd~~~~--~~~~~~~~h~~~v~~l~~~~~~-~~~l~s~s~dg~i~iwd~~~~~~---~~ 346 (502)
|++. .+.+|++|+.|++|++||+.++ +++..+.+|...|.+++|+|++ ..+|++|+.|++|++||++.... ..
T Consensus 65 ~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~ 144 (316)
T 3bg1_A 65 WAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKK 144 (316)
T ss_dssp ECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECC
T ss_pred eCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceee
Confidence 9753 3569999999999999999987 4667788999999999999982 27999999999999999987532 12
Q ss_pred ceEeecCCeeEEEeCCCC----------------CCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEE
Q 010748 347 FKWAVAADVESLAWDPHA----------------EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTI 410 (502)
Q Consensus 347 ~~~~~~~~v~~v~~~~~~----------------~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 410 (502)
....|...+.+++|+|+. ..+|++|+.|+.|++||++.... ..++..+.+|...|.++
T Consensus 145 ~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~------~~~~~~l~~h~~~V~~v 218 (316)
T 3bg1_A 145 INNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQ------WKEEQKLEAHSDWVRDV 218 (316)
T ss_dssp BTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSC------EEEEECCBCCSSCEEEE
T ss_pred eeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCc------cceeeecccCCCceEEE
Confidence 233567789999999963 24799999999999999975310 13556778999999999
Q ss_pred EEcCCC---CCEEEEEeCCCcEEEEECCCCC--eeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010748 411 SYNPLV---PNLLATGSTDKMVKLWDLSNNQ--PSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 411 ~~sp~~---~~~l~t~s~dg~i~vwd~~~~~--~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~ 481 (502)
+|+|++ ..+|++|+.|++|+||++.+.. ......+..|.+.|++++|+|++++ |++|+.||.|+||+...
T Consensus 219 ~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~-las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 219 AWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANI-LAVSGGDNKVTLWKESV 293 (316)
T ss_dssp ECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCC-EEEEESSSCEEEEEECT
T ss_pred EecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCE-EEEEcCCCeEEEEEECC
Confidence 999975 3789999999999999997631 0011223457789999999999995 99999999999999863
No 57
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.3e-33 Score=273.49 Aligned_cols=255 Identities=20% Similarity=0.306 Sum_probs=212.9
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEE
Q 010748 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.|++| +|++++||+|+.||.|+||++...... ......+.+|...|++++
T Consensus 15 ~~~~~-------~~~~~~l~~~~~dg~i~iw~~~~~~~~-----------------------~~~~~~~~~~~~~v~~~~ 64 (351)
T 3f3f_A 15 HDVVY-------DFYGRHVATCSSDQHIKVFKLDKDTSN-----------------------WELSDSWRAHDSSIVAID 64 (351)
T ss_dssp EEEEE-------CSSSSEEEEEETTSEEEEEEECSSSCC-----------------------EEEEEEEECCSSCEEEEE
T ss_pred eEEEE-------cCCCCEEEEeeCCCeEEEEECCCCCCc-----------------------ceecceeccCCCcEEEEE
Confidence 78887 789999999999999999999753221 123334568999999999
Q ss_pred eccC-CCcEEEEEecCCcEEEEeCCCC---------eeeEeeccCCCCeEEEEEcCC--CCcEEEEEeCCCcEEEEecCC
Q 010748 274 WNKE-FRNILASASADKQVKIWDVAAG---------KCNLTLEHHTDKVQAVAWNHH--SPQILLSGSFDRSVVMKDARI 341 (502)
Q Consensus 274 ~~~~-~~~~l~sgs~dg~v~vwd~~~~---------~~~~~~~~h~~~v~~l~~~~~--~~~~l~s~s~dg~i~iwd~~~ 341 (502)
|+|. .+.+|++|+.||+|++||+.++ +++..+..|...|.+++|+|+ + .+|++++.||.|++||+++
T Consensus 65 ~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~v~iwd~~~ 143 (351)
T 3f3f_A 65 WASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLG-LKLACLGNDGILRLYDALE 143 (351)
T ss_dssp ECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTCEEEEEECSS
T ss_pred EcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCC-cEEEEecCCCcEEEecCCC
Confidence 9994 2569999999999999999887 668888899999999999999 7 8999999999999999998
Q ss_pred CCCccceE-------------eecCCeeEEEeCCC--CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCC
Q 010748 342 STHSGFKW-------------AVAADVESLAWDPH--AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKA 406 (502)
Q Consensus 342 ~~~~~~~~-------------~~~~~v~~v~~~~~--~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~ 406 (502)
........ .+...+.+++|+|+ ...++++++.++.+.+|+..... ...+..+.+|...
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~~h~~~ 216 (351)
T 3f3f_A 144 PSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGK-------LHVAAKLPGHKSL 216 (351)
T ss_dssp TTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSC-------EEEEEECCCCCSC
T ss_pred hHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCc-------eeeeeecCCCCcc
Confidence 77544322 35667999999997 35589999999999888877652 1346778889999
Q ss_pred eeEEEEcCCCC---CEEEEEeCCCcEEEEECCCCC--------------------------------------------e
Q 010748 407 VCTISYNPLVP---NLLATGSTDKMVKLWDLSNNQ--------------------------------------------P 439 (502)
Q Consensus 407 v~~l~~sp~~~---~~l~t~s~dg~i~vwd~~~~~--------------------------------------------~ 439 (502)
|++++|+|+++ .+|++|+.||.|++||++... .
T Consensus 217 i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (351)
T 3f3f_A 217 IRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQV 296 (351)
T ss_dssp EEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEE
T ss_pred eeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccc
Confidence 99999999863 699999999999999997641 2
Q ss_pred eEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccc
Q 010748 440 SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 487 (502)
Q Consensus 440 ~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~ 487 (502)
..+..+.+|.+.|++++|+|++++ |++|+.||.|+||++.++..+..
T Consensus 297 ~~~~~~~~h~~~v~~~~~s~~~~~-l~s~~~dg~v~iw~~~~~~~~~~ 343 (351)
T 3f3f_A 297 ELLSEHDDHNGEVWSVSWNLTGTI-LSSAGDDGKVRLWKATYSNEFKC 343 (351)
T ss_dssp EEEEEECTTSSCEEEEEECSSSCC-EEEEETTSCEEEEEECTTSCEEE
T ss_pred cEEEEEecccccEEEEEEcCCCCE-EEEecCCCcEEEEecCcCcchhh
Confidence 456777889999999999999995 99999999999999998876543
No 58
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-33 Score=272.09 Aligned_cols=244 Identities=21% Similarity=0.359 Sum_probs=192.7
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCccccccc--ccCcccceee
Q 010748 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYK--KGSHTDSVLG 271 (502)
Q Consensus 194 ~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~h~~~V~~ 271 (502)
.++.| +++ +||+|+.|+.|+||++..... ..... ..+|...|.+
T Consensus 18 ~~~~~-------s~~--~las~~~D~~i~lw~~~~~~~-------------------------~~~~~~~~~~h~~~v~~ 63 (330)
T 2hes_X 18 WSFDF-------SQG--ILATGSTDRKIKLVSVKYDDF-------------------------TLIDVLDETAHKKAIRS 63 (330)
T ss_dssp EEEEE-------ETT--EEEEEESSSCEEEEECSSSCC-------------------------EEEEEECTTCCCSCEEE
T ss_pred eeecc-------CCC--EEEEEcCCCEEEEEEecCCCe-------------------------EEEEEEecCCccCCEEE
Confidence 56665 444 999999999999999974321 00111 1249999999
Q ss_pred EEeccCCCcEEEEEecCCcEEEEeCCC-------CeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCC-
Q 010748 272 LAWNKEFRNILASASADKQVKIWDVAA-------GKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST- 343 (502)
Q Consensus 272 l~~~~~~~~~l~sgs~dg~v~vwd~~~-------~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~- 343 (502)
++|+|+ +.+|++|+.|++|+||++.. .+++..+.+|...|.+++|+|++ ++|++|+.|++|++||++...
T Consensus 64 v~~sp~-~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g-~~las~s~D~~v~iwd~~~~~~ 141 (330)
T 2hes_X 64 VAWRPH-TSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDG-YYLATCSRDKSVWIWETDESGE 141 (330)
T ss_dssp EEECTT-SSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTS-CEEEEEETTSCEEEEECCTTCC
T ss_pred EEECCC-CCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCC-CEEEEEeCCCEEEEEeccCCCC
Confidence 999999 56999999999999999853 45677889999999999999998 899999999999999995432
Q ss_pred ---CccceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCC-CCE
Q 010748 344 ---HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLV-PNL 419 (502)
Q Consensus 344 ---~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~-~~~ 419 (502)
.......|...|.+++|+|++. +|++++.|+.|++||++... ..++..+.+|...|.+++|+|++ ..+
T Consensus 142 ~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~iW~~~~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~~~ 213 (330)
T 2hes_X 142 EYECISVLQEHSQDVKHVIWHPSEA-LLASSSYDDTVRIWKDYDDD-------WECVAVLNGHEGTVWSSDFDKTEGVFR 213 (330)
T ss_dssp CCEEEEEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEEEETTE-------EEEEEEECCCSSCEEEEEECCSSSSCE
T ss_pred CeEEEEEeccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCCCC-------eeEEEEccCCCCcEEEEEecCCCCeeE
Confidence 2233446788999999999765 89999999999999987641 25677889999999999999983 268
Q ss_pred EEEEeCCCcEEEEECCCCCe------eEEEEecC-CCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010748 420 LATGSTDKMVKLWDLSNNQP------SCIASRNP-KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 420 l~t~s~dg~i~vwd~~~~~~------~~~~~~~~-~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~ 483 (502)
|++|+.|++|++|++..... .+...+.. |...|++++|++++ +|++++.||.|+||++.++.
T Consensus 214 l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~--~l~s~~~dg~v~iw~~~~~~ 282 (330)
T 2hes_X 214 LCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG--LIASVGADGVLAVYEEVDGE 282 (330)
T ss_dssp EEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS--CEEEEETTSCEEEEEEETTE
T ss_pred EEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC--EEEEEeCCCEEEEEEcCCCc
Confidence 99999999999999865421 23444444 88999999999776 48999999999999998763
No 59
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-34 Score=288.30 Aligned_cols=300 Identities=14% Similarity=0.164 Sum_probs=223.5
Q ss_pred CCCccccccccccC-CCceEEEEEecCCcceeEEEEEec---CCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCE
Q 010748 136 DEDSEDLEDMTINP-NDAVIVCARNEDDVSHLEVYILEE---SDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNF 211 (502)
Q Consensus 136 ~~~~~~v~~~~~~p-~~~~l~~~~~~~~~~~l~v~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 211 (502)
..|...|.+++|+| ++++|++|+.++ .++||.+.. .......+...|. ....|++| +|++++
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg---~v~vwd~~~~~~~~~~~~~~~~~h~----~~v~~~~~-------~~~~~~ 125 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQG---VIKIWNLKEIIVGEVYSSSLTYDCS----STVTQITM-------IPNFDA 125 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTS---EEEEEEHHHHHTTCCCSCSEEEECS----SCEEEEEE-------CTTSSE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCc---eEEEeECcccccCcccceeeeccCC----CCEEEEEE-------eCCCCE
Confidence 45889999999999 999999999887 667777665 2211112222333 33478887 689999
Q ss_pred EEEecCCCcEEEeeCC---CCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEE--eccCCCcEEEEEe
Q 010748 212 MAVGSMEPAIEIWDLD---VIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA--WNKEFRNILASAS 286 (502)
Q Consensus 212 la~g~~dg~I~iwdl~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~--~~~~~~~~l~sgs 286 (502)
|++|+.||.|++||+. .+..... +.. ...........++...+.++. ++++ +.+|++|+
T Consensus 126 l~s~s~dg~i~vwd~~~~~~~~~~~~---~~~------------~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~ 189 (437)
T 3gre_A 126 FAVSSKDGQIIVLKVNHYQQESEVKF---LNC------------ECIRKINLKNFGKNEYAVRMRAFVNEE-KSLLVALT 189 (437)
T ss_dssp EEEEETTSEEEEEEEEEEEETTEEEE---EEE------------EEEEEEEGGGGSSCCCEEEEEEEECSS-CEEEEEEE
T ss_pred EEEEeCCCEEEEEEeccccCCceeec---ccc------------ceeEEEEccCcccccCceEEEEEEcCC-CCEEEEEe
Confidence 9999999999999995 2211110 000 000000111111667788887 5577 67999999
Q ss_pred cCCcEEEEeCCCCeeeEeecc--CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceE-eecCCeeEEEeCCC
Q 010748 287 ADKQVKIWDVAAGKCNLTLEH--HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-AVAADVESLAWDPH 363 (502)
Q Consensus 287 ~dg~v~vwd~~~~~~~~~~~~--h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~v~~v~~~~~ 363 (502)
.||.|++||+.+++++..+.. |...|++++|+|++ .+|++|+.||.|++||+++........ .+...|.+++|+|.
T Consensus 190 ~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 268 (437)
T 3gre_A 190 NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEEC-CVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQF 268 (437)
T ss_dssp TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTS-CEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTT
T ss_pred CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCC-CEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccc
Confidence 999999999999999999987 89999999999998 899999999999999999876554332 55668999977763
Q ss_pred ---CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEe------------------------c--cCCCeeEEEEcC
Q 010748 364 ---AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH------------------------A--HDKAVCTISYNP 414 (502)
Q Consensus 364 ---~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~------------------------~--h~~~v~~l~~sp 414 (502)
...++++|+.||.|++||++++ ..+..+. + |...|++++|+
T Consensus 269 ~s~~~~~l~s~~~dg~i~iwd~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~- 338 (437)
T 3gre_A 269 YGKNSVIVVGGSSKTFLTIWNFVKG---------HCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS- 338 (437)
T ss_dssp TCTTEEEEEEESTTEEEEEEETTTT---------EEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-
T ss_pred cCCCccEEEEEcCCCcEEEEEcCCC---------cEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-
Confidence 2348999999999999999876 3333332 2 66778999999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCCeeEEEEe-----------------------------------cCCCCcEEEEEEcC
Q 010748 415 LVPNLLATGSTDKMVKLWDLSNNQPSCIASR-----------------------------------NPKAGAVFSVAFSE 459 (502)
Q Consensus 415 ~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~-----------------------------------~~~~~~v~~~~~sp 459 (502)
++ .+|++|+.|+.|++||+.+++....... ..|...|++++|++
T Consensus 339 ~~-~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~ 417 (437)
T 3gre_A 339 ND-KILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCE 417 (437)
T ss_dssp TT-EEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEE
T ss_pred Cc-eEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeec
Confidence 45 8999999999999999998764322221 12889999999999
Q ss_pred C--CCcEEEEEeCCCcEEEEE
Q 010748 460 D--SPFVLAIGGSKGKLEIWD 478 (502)
Q Consensus 460 d--~~~ll~sg~~dg~i~vwd 478 (502)
+ +. +|++|+.||.|+||+
T Consensus 418 ~~~~~-~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 418 VDETP-LLVACDNSGLIGIFQ 437 (437)
T ss_dssp SSSSE-EEEEEETTSCEEEEC
T ss_pred cCCce-EEEEEcCCceEEEeC
Confidence 8 55 799999999999995
No 60
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=8e-33 Score=274.55 Aligned_cols=303 Identities=14% Similarity=0.216 Sum_probs=224.4
Q ss_pred CCccccccccccC-CCceEEEEEecCCcceeEEEEEecCCCCCCCeeee---------eccccCCCcceeeeecCCCCCC
Q 010748 137 EDSEDLEDMTINP-NDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVH---------HHIIIPAFPLCMAWLDCPLKDR 206 (502)
Q Consensus 137 ~~~~~v~~~~~~p-~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~---------~~~~~~~~~~~~~~~~~~~~~s 206 (502)
.|...|.+++|+| ++++|++|+.++ .+.||.+..... ...+.. +.........+++| +
T Consensus 41 ~h~~~v~~~~~s~~~~~~l~~~~~dg---~i~iw~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~ 108 (408)
T 4a11_B 41 IHGGGINTLDIEPVEGRYMLSGGSDG---VIVLYDLENSSR--QSYYTCKAVCSIGRDHPDVHRYSVETVQW-------Y 108 (408)
T ss_dssp CCSSCEEEEEECTTTCCEEEEEETTS---CEEEEECCCCSS--SSCEEECEEEEECTTCTTCCSSCEEEEEE-------C
T ss_pred ccCCcEEEEEEecCCCCEEEEEcCCC---eEEEEECCCCcc--cceEeccccccccccccccCCCcEEEEEE-------c
Confidence 3888999999999 999999999887 567777665443 111110 00012233467777 5
Q ss_pred C-CCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCC--CcEEE
Q 010748 207 E-KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEF--RNILA 283 (502)
Q Consensus 207 ~-~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~--~~~l~ 283 (502)
| ++++|++|+.||.|++|++.+..... . ..+...+.++.|++.+ ..+|+
T Consensus 109 ~~~~~~l~s~~~d~~i~iwd~~~~~~~~---------------------------~-~~~~~~~~~~~~~~~~~~~~~~~ 160 (408)
T 4a11_B 109 PHDTGMFTSSSFDKTLKVWDTNTLQTAD---------------------------V-FNFEETVYSHHMSPVSTKHCLVA 160 (408)
T ss_dssp TTCTTCEEEEETTSEEEEEETTTTEEEE---------------------------E-EECSSCEEEEEECSSCSSCCEEE
T ss_pred cCCCcEEEEEeCCCeEEEeeCCCCccce---------------------------e-ccCCCceeeeEeecCCCCCcEEE
Confidence 6 78899999999999999997533211 1 1366789999999863 34999
Q ss_pred EEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccce---------------
Q 010748 284 SASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK--------------- 348 (502)
Q Consensus 284 sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~--------------- 348 (502)
+|+.+|.|++||+.+++++..+..|...|.+++|+|++..+|++|+.||.|++||++........
T Consensus 161 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (408)
T 4a11_B 161 VGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESA 240 (408)
T ss_dssp EEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTS
T ss_pred EEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccc
Confidence 99999999999999999999999999999999999999557999999999999999876522211
Q ss_pred -EeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCC
Q 010748 349 -WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK 427 (502)
Q Consensus 349 -~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg 427 (502)
..+...|.+++|+|++. ++++++.||.|++||+++....... ...........+.. .+.......+++++.++
T Consensus 241 ~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 314 (408)
T 4a11_B 241 NTAHNGKVNGLCFTSDGL-HLLTVGTDNRMRLWNSSNGENTLVN----YGKVCNNSKKGLKF-TVSCGCSSEFVFVPYGS 314 (408)
T ss_dssp SCSCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCBCCCC----CCCCCCCCSSCCCC-EECCSSSSCEEEEEETT
T ss_pred cccccCceeEEEEcCCCC-EEEEecCCCeEEEEECCCCccceec----ccccccccccccee-EEecCCCceEEEEecCC
Confidence 35778899999999765 8999999999999999987321100 00000111112222 22222236677778899
Q ss_pred cEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010748 428 MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 428 ~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~ 488 (502)
.|++||+.+++ .+..+.+|.+.|++++|+|+++ +|++|+.||.|++|++.+++.+...
T Consensus 315 ~i~v~d~~~~~--~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~iw~~~~~~~~~~~ 372 (408)
T 4a11_B 315 TIAVYTVYSGE--QITMLKGHYKTVDCCVFQSNFQ-ELYSGSRDCNILAWVPSLYEPVPDD 372 (408)
T ss_dssp EEEEEETTTCC--EEEEECCCSSCEEEEEEETTTT-EEEEEETTSCEEEEEECC-------
T ss_pred EEEEEECcCCc--ceeeeccCCCeEEEEEEcCCCC-EEEEECCCCeEEEEeCCCCCccCCC
Confidence 99999999988 5777889999999999999998 5999999999999999998877543
No 61
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4.1e-33 Score=280.65 Aligned_cols=319 Identities=13% Similarity=0.211 Sum_probs=220.6
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCC------C---CCeeeeec--------cccCCCcceeeee
Q 010748 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGG------D---PNLYVHHH--------IIIPAFPLCMAWL 199 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~------~---~~l~~~~~--------~~~~~~~~~~~~~ 199 (502)
.+.+.|.+++|+|++++||+|+.++ .+.||.+...... . ...+..|. ..+.....+++|
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg---~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~- 101 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGG---RVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW- 101 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTS---EEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEE-
T ss_pred cccCcEEEEEECCCCCEEEEEcCCC---eEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEE-
Confidence 3678999999999999999999887 5677776644310 0 01111221 001133567777
Q ss_pred cCCCCCCCCC--CEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccc-cC------------CcccccccccC
Q 010748 200 DCPLKDREKG--NFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSK-KG------------KKSSIKYKKGS 264 (502)
Q Consensus 200 ~~~~~~s~~~--~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~-~~------------~~~~~~~~~~~ 264 (502)
+|++ .+|++|+.|+.|++|++...........+............. .. ..........+
T Consensus 102 ------~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (447)
T 3dw8_B 102 ------LPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANA 175 (447)
T ss_dssp ------CCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSC
T ss_pred ------cCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccC
Confidence 6777 899999999999999987533211000000000000000000 00 00001122468
Q ss_pred cccceeeEEeccCCCcEEEEEecCCcEEEEeCCC-CeeeE-------eeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEE
Q 010748 265 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAA-GKCNL-------TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVM 336 (502)
Q Consensus 265 h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~-~~~~~-------~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~i 336 (502)
|...|++++|+|+ +.+|++| .|++|++||+.+ ++++. .+.+|...|++++|+|++..+|++|+.||.|++
T Consensus 176 h~~~v~~~~~~~~-~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~i 253 (447)
T 3dw8_B 176 HTYHINSISINSD-YETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRL 253 (447)
T ss_dssp CSSCCCEEEECTT-SSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred CCcceEEEEEcCC-CCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEE
Confidence 9999999999998 5689998 799999999984 44444 356899999999999998789999999999999
Q ss_pred EecCCCCC----ccceEeecC------------CeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEE
Q 010748 337 KDARISTH----SGFKWAVAA------------DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL 400 (502)
Q Consensus 337 wd~~~~~~----~~~~~~~~~------------~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~ 400 (502)
||+++... ......+.. .|.+++|+|++. ++++++. |.|++||+++. ..++..+
T Consensus 254 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~-~~v~iwd~~~~--------~~~~~~~ 323 (447)
T 3dw8_B 254 CDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR-YMMTRDY-LSVKVWDLNME--------NRPVETY 323 (447)
T ss_dssp EETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS-EEEEEES-SEEEEEETTCC--------SSCSCCE
T ss_pred EECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCC-EEEEeeC-CeEEEEeCCCC--------cccccee
Confidence 99998775 333334443 899999999765 7888888 99999999973 2566777
Q ss_pred eccCCC---------------eeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEe--------------------
Q 010748 401 HAHDKA---------------VCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASR-------------------- 445 (502)
Q Consensus 401 ~~h~~~---------------v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~-------------------- 445 (502)
..|... +..++|+|++ .+|++|+.||.|++||+.+++...+...
T Consensus 324 ~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~-~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (447)
T 3dw8_B 324 QVHEYLRSKLCSLYENDCIFDKFECCWNGSD-SVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGK 402 (447)
T ss_dssp ESCGGGTTTHHHHHHTSGGGCCCCEEECTTS-SEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSC
T ss_pred eccccccccccccccccccccceEEEECCCC-CEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCC
Confidence 777532 3349999998 8999999999999999998874322111
Q ss_pred ----------cCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECC
Q 010748 446 ----------NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTL 480 (502)
Q Consensus 446 ----------~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~ 480 (502)
..+...|.+++|+|++. +||+++.++ +++|..+
T Consensus 403 ~~~~~~~~~~~~~~~~i~~~~~~p~~~-~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 403 RKKDEISVDSLDFNKKILHTAWHPKEN-IIAVATTNN-LYIFQDK 445 (447)
T ss_dssp CCTTCEEGGGCCTTSCCCEEEECSSSS-EEEEECSSC-EEEEECC
T ss_pred cccccccccccccCCceeEEEECCCCC-EEEEEecce-eeeeccc
Confidence 12345688999999999 588877765 8888754
No 62
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.1e-33 Score=303.13 Aligned_cols=291 Identities=19% Similarity=0.256 Sum_probs=239.1
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010748 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~ 216 (502)
.|...|.+++|+|++++|++|+.++ .+.||.+..... ...+..| .....++.| +|++++||+|+
T Consensus 11 ~h~~~v~~i~~sp~~~~la~~~~~g---~v~iwd~~~~~~--~~~~~~~----~~~v~~~~~-------s~~~~~l~~~~ 74 (814)
T 3mkq_A 11 NRSDRVKGIDFHPTEPWVLTTLYSG---RVEIWNYETQVE--VRSIQVT----ETPVRAGKF-------IARKNWIIVGS 74 (814)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTS---EEEEEETTTTEE--EEEEECC----SSCEEEEEE-------EGGGTEEEEEE
T ss_pred cCCCceEEEEECCCCCEEEEEeCCC---EEEEEECCCCce--EEEEecC----CCcEEEEEE-------eCCCCEEEEEe
Confidence 4788999999999999999999776 455555433221 1111222 233467887 68999999999
Q ss_pred CCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeC
Q 010748 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV 296 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~ 296 (502)
.+|.|+||++.++.. ...+.+|...|++++|+|+ +.+|++|+.||+|++||+
T Consensus 75 ~dg~i~vw~~~~~~~---------------------------~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~vw~~ 126 (814)
T 3mkq_A 75 DDFRIRVFNYNTGEK---------------------------VVDFEAHPDYIRSIAVHPT-KPYVLSGSDDLTVKLWNW 126 (814)
T ss_dssp TTSEEEEEETTTCCE---------------------------EEEEECCSSCEEEEEECSS-SSEEEEEETTSEEEEEEG
T ss_pred CCCeEEEEECCCCcE---------------------------EEEEecCCCCEEEEEEeCC-CCEEEEEcCCCEEEEEEC
Confidence 999999999976432 2234579999999999999 558999999999999999
Q ss_pred CCC-eeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeec-CCeeEEEeCC--CCCCEEEEEe
Q 010748 297 AAG-KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVA-ADVESLAWDP--HAEHSFVVSL 372 (502)
Q Consensus 297 ~~~-~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-~~v~~v~~~~--~~~~~~~~~~ 372 (502)
.++ .....+.+|...|.+++|+|.++.+|++++.||.|++||+++.........+. ..+.+++|+| ++. ++++++
T Consensus 127 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~ 205 (814)
T 3mkq_A 127 ENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKP-YMITAS 205 (814)
T ss_dssp GGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCC-EEEEEC
T ss_pred CCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCC-EEEEEe
Confidence 987 77788889999999999999433899999999999999998877665444443 8899999999 654 899999
Q ss_pred CCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCcE
Q 010748 373 EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAV 452 (502)
Q Consensus 373 ~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v 452 (502)
.+|.|++||+++. ..+..+..|...|++++|+|++ .+|++++.||.|++||+.+++ .+..+..|...+
T Consensus 206 ~dg~i~~~d~~~~---------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~v~vwd~~~~~--~~~~~~~~~~~v 273 (814)
T 3mkq_A 206 DDLTIKIWDYQTK---------SCVATLEGHMSNVSFAVFHPTL-PIIISGSEDGTLKIWNSSTYK--VEKTLNVGLERS 273 (814)
T ss_dssp TTSEEEEEETTTT---------EEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCS--EEEEECCSSSSE
T ss_pred CCCEEEEEECCCC---------cEEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCc--EEEEeecCCCcE
Confidence 9999999999886 6788889999999999999998 899999999999999999887 567778888999
Q ss_pred EEEEEcCCCCcEEEEEeCCCcEEEEECCCCcc
Q 010748 453 FSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 484 (502)
Q Consensus 453 ~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~ 484 (502)
.+++|+|++..++++++.++.+.+|++.....
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (814)
T 3mkq_A 274 WCIATHPTGRKNYIASGFDNGFTVLSLGNDEP 305 (814)
T ss_dssp EEEEECTTCGGGEEEEEETTEEEEEECSCCSC
T ss_pred EEEEEccCCCceEEEEEeCCCEEEEEcCCCCc
Confidence 99999999976545556677899999876543
No 63
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-33 Score=275.37 Aligned_cols=250 Identities=23% Similarity=0.353 Sum_probs=207.4
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEE
Q 010748 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.|++| +|++++||+|+.||.|+||++.... ......+.+|...|++++
T Consensus 15 ~~~~~-------s~~~~~l~~~~~dg~i~iw~~~~~~-------------------------~~~~~~~~~h~~~v~~~~ 62 (379)
T 3jrp_A 15 HDAVL-------DYYGKRLATCSSDKTIKIFEVEGET-------------------------HKLIDTLTGHEGPVWRVD 62 (379)
T ss_dssp EEEEE-------CSSSSEEEEEETTSCEEEEEEETTE-------------------------EEEEEEECCCSSCEEEEE
T ss_pred EEEEE-------cCCCCEEEEEECCCcEEEEecCCCc-------------------------ceeeeEecCCCCcEEEEE
Confidence 67777 7899999999999999999986311 223334568999999999
Q ss_pred eccC-CCcEEEEEecCCcEEEEeCCCCe--eeEeeccCCCCeEEEEEcCC--CCcEEEEEeCCCcEEEEecCCCCCc--c
Q 010748 274 WNKE-FRNILASASADKQVKIWDVAAGK--CNLTLEHHTDKVQAVAWNHH--SPQILLSGSFDRSVVMKDARISTHS--G 346 (502)
Q Consensus 274 ~~~~-~~~~l~sgs~dg~v~vwd~~~~~--~~~~~~~h~~~v~~l~~~~~--~~~~l~s~s~dg~i~iwd~~~~~~~--~ 346 (502)
|+++ .+.+|++|+.||.|++||+.+++ .+..+..|...|.+++|+|+ + .+|++++.|+.|++||++..... .
T Consensus 63 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~ 141 (379)
T 3jrp_A 63 WAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKENGTTSPI 141 (379)
T ss_dssp ECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCTTSCCCEE
T ss_pred eCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCC-CEEEEecCCCcEEEEecCCCCceeeE
Confidence 9865 24699999999999999999987 77888889999999999999 6 89999999999999999987443 2
Q ss_pred ceEeecCCeeEEEeCCC------------CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcC
Q 010748 347 FKWAVAADVESLAWDPH------------AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNP 414 (502)
Q Consensus 347 ~~~~~~~~v~~v~~~~~------------~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp 414 (502)
....+...|.+++|+|. ...++++++.||.|++||+++.... ......+.+|...|++++|+|
T Consensus 142 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-----~~~~~~~~~h~~~v~~~~~sp 216 (379)
T 3jrp_A 142 IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT-----YVLESTLEGHSDWVRDVAWSP 216 (379)
T ss_dssp EEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTE-----EEEEEEECCCSSCEEEEEECC
T ss_pred EecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcc-----eeeEEEEecccCcEeEEEECC
Confidence 34467889999999994 3458999999999999999876210 134567788999999999999
Q ss_pred CC--CCEEEEEeCCCcEEEEECCCCCe---eEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCC
Q 010748 415 LV--PNLLATGSTDKMVKLWDLSNNQP---SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 415 ~~--~~~l~t~s~dg~i~vwd~~~~~~---~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~ 482 (502)
++ +.+|++++.||.|++||+..+.. ..+.....|...|++++|+|++.+ |++++.||.|++|++...
T Consensus 217 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 217 TVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNV-LALSGGDNKVTLWKENLE 288 (379)
T ss_dssp CCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCC-EEEEESSSSEEEEEEEET
T ss_pred CCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCE-EEEecCCCcEEEEeCCCC
Confidence 93 39999999999999999988642 233333458889999999999995 888999999999999854
No 64
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.9e-33 Score=280.84 Aligned_cols=286 Identities=13% Similarity=0.153 Sum_probs=220.6
Q ss_pred cccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCC
Q 010748 140 EDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEP 219 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~dg 219 (502)
..+....++|++++|++|+.++ .+.||.+. .......+..| .....|++| +|++++|++|+.|+
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg---~i~iwd~~--~~~~~~~~~~h----~~~v~~~~~-------~~~~~~l~s~s~d~ 161 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEG---DIKVLDSN--FNLQREIDQAH----VSEITKLKF-------FPSGEALISSSQDM 161 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTS---CEEEECTT--SCEEEEETTSS----SSCEEEEEE-------CTTSSEEEEEETTS
T ss_pred CceEEEEEecCCCEEEEEECCC---CEEEEeCC--Ccceeeecccc----cCccEEEEE-------CCCCCEEEEEeCCC
Confidence 4455557899999999999887 44555443 32111111122 334477777 78999999999999
Q ss_pred cEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeCCCC
Q 010748 220 AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG 299 (502)
Q Consensus 220 ~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~ 299 (502)
.|++||+.+...+ ..+.+|...|++++|+|+ +.+|++|+.||+|++||+.++
T Consensus 162 ~i~iwd~~~~~~~---------------------------~~~~~h~~~v~~~~~~~~-~~~l~s~~~d~~v~iwd~~~~ 213 (420)
T 3vl1_A 162 QLKIWSVKDGSNP---------------------------RTLIGHRATVTDIAIIDR-GRNVLSASLDGTIRLWECGTG 213 (420)
T ss_dssp EEEEEETTTCCCC---------------------------EEEECCSSCEEEEEEETT-TTEEEEEETTSCEEEEETTTT
T ss_pred eEEEEeCCCCcCc---------------------------eEEcCCCCcEEEEEEcCC-CCEEEEEcCCCcEEEeECCCC
Confidence 9999999754322 234579999999999999 569999999999999999999
Q ss_pred eeeEeecc---CCCCeEEE---------------------EEcCCCCcEEEEEeCCCcEEEEecCCCCCccceE-eecCC
Q 010748 300 KCNLTLEH---HTDKVQAV---------------------AWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-AVAAD 354 (502)
Q Consensus 300 ~~~~~~~~---h~~~v~~l---------------------~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~ 354 (502)
+++..+.. |...|.++ +|+|++ .+|++|+.||.|++||+++........ .+...
T Consensus 214 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 292 (420)
T 3vl1_A 214 TTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYG-KYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCS 292 (420)
T ss_dssp EEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTT-EEEEEEETTSCEEEEETTTCCEEEEECCTTSSC
T ss_pred ceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCC-CEEEEEcCCCeEEEEECCCCceeEEcccccCCC
Confidence 99988864 34445554 457777 899999999999999999877654333 36678
Q ss_pred eeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEec-cCCCeeEEEEcCCCCCEEEEEeCCCcEEEEE
Q 010748 355 VESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA-HDKAVCTISYNPLVPNLLATGSTDKMVKLWD 433 (502)
Q Consensus 355 v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd 433 (502)
|.+++|+|++..++++|+.||.|++||+++. ..++..+.. |...|+++.+. ++ .+|++++.|+.|++|+
T Consensus 293 v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~--------~~~~~~~~~~~~~~v~~~~~~-~~-~~l~s~~~d~~v~iw~ 362 (420)
T 3vl1_A 293 CNSLTVDGNNANYIYAGYENGMLAQWDLRSP--------ECPVGEFLINEGTPINNVYFA-AG-ALFVSSGFDTSIKLDI 362 (420)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCT--------TSCSEEEEESTTSCEEEEEEE-TT-EEEEEETTTEEEEEEE
T ss_pred ceeEEEeCCCCCEEEEEeCCCeEEEEEcCCC--------cCchhhhhccCCCCceEEEeC-CC-CEEEEecCCccEEEEe
Confidence 9999999988779999999999999999987 355677766 67788888665 45 7999999999999999
Q ss_pred CCCCCe-------eEEEEecCCCCcEEEEEEcCCCC---cEEEEEeCCCcEEEEECCC
Q 010748 434 LSNNQP-------SCIASRNPKAGAVFSVAFSEDSP---FVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 434 ~~~~~~-------~~~~~~~~~~~~v~~~~~spd~~---~ll~sg~~dg~i~vwd~~~ 481 (502)
+..... ........|.+.|.+++|+|++. . |++++.+|.+.+|++..
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~-l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 363 ISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGE-VLEVGKNNFCALYNLSN 419 (420)
T ss_dssp ECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCE-EEEEETTTEEEEEESCC
T ss_pred ccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcce-EEEEcCCceEEEEeccC
Confidence 877321 01223456788999999999998 6 44566789999999864
No 65
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=7e-33 Score=268.56 Aligned_cols=285 Identities=16% Similarity=0.199 Sum_probs=227.2
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCC-EEEEe
Q 010748 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGN-FMAVG 215 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~la~g 215 (502)
.|.+.|.+++|+|++++|++|+.++ .+.||.+..... ...............|++| +|+++ +|++|
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~---~v~iw~~~~~~~---~~~~~~~~~~~~~v~~~~~-------~~~~~~~l~~~ 75 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDG---SLTVYKFDIQAK---NVDLLQSLRYKHPLLCCNF-------IDNTDLQIYVG 75 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTS---EEEEEEEETTTT---EEEEEEEEECSSCEEEEEE-------EESSSEEEEEE
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCC---eEEEEEeCCCCc---cccceeeeecCCceEEEEE-------CCCCCcEEEEE
Confidence 5888999999999999999999876 667777765541 1111111122344578888 67899 99999
Q ss_pred cCCCcEEEeeC-CCCCCcCcceecCCcchhhhhhccccCCcccccccccC--cccceeeEEeccCCCcEEEEEecCCcEE
Q 010748 216 SMEPAIEIWDL-DVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGS--HTDSVLGLAWNKEFRNILASASADKQVK 292 (502)
Q Consensus 216 ~~dg~I~iwdl-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~V~~l~~~~~~~~~l~sgs~dg~v~ 292 (502)
+.+|.|++|++ ..... ..+.+ |...|.+++|+| +.+|++|+.|+.|+
T Consensus 76 ~~dg~i~~wd~~~~~~~----------------------------~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~ 125 (342)
T 1yfq_A 76 TVQGEILKVDLIGSPSF----------------------------QALTNNEANLGICRICKYG--DDKLIAASWDGLIE 125 (342)
T ss_dssp ETTSCEEEECSSSSSSE----------------------------EECBSCCCCSCEEEEEEET--TTEEEEEETTSEEE
T ss_pred cCCCeEEEEEeccCCce----------------------------EeccccCCCCceEEEEeCC--CCEEEEEcCCCeEE
Confidence 99999999999 64321 23446 999999999999 45999999999999
Q ss_pred EEeCCC---------CeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCC-CCCc--cceEeecCCeeEEEe
Q 010748 293 IWDVAA---------GKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI-STHS--GFKWAVAADVESLAW 360 (502)
Q Consensus 293 vwd~~~---------~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~-~~~~--~~~~~~~~~v~~v~~ 360 (502)
+||+.+ ++++..+. |...|.+++|+|++ +++++.++.|++||+++ .... .....+...+.+++|
T Consensus 126 iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~ 201 (342)
T 1yfq_A 126 VIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVAL 201 (342)
T ss_dssp EECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEE
T ss_pred EEcccccccccccccCCeeeEEe-eCCceEEEEecCCc---EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEE
Confidence 999988 77777777 89999999999865 99999999999999998 5432 223356778999999
Q ss_pred CC-CCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCC---------CeeEEEEcCCCCCEEEEEeCCCcEE
Q 010748 361 DP-HAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDK---------AVCTISYNPLVPNLLATGSTDKMVK 430 (502)
Q Consensus 361 ~~-~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~---------~v~~l~~sp~~~~~l~t~s~dg~i~ 430 (502)
+| ++. ++++++.+|.|++|+++...... .......+..|.. .|++++|+|++ .+|++++.||.|+
T Consensus 202 ~~~~~~-~l~~~~~dg~i~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~ 276 (342)
T 1yfq_A 202 LPKEQE-GYACSSIDGRVAVEFFDDQGDDY---NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRH-KFLYTAGSDGIIS 276 (342)
T ss_dssp CSGGGC-EEEEEETTSEEEEEECCTTCCST---TCTTCEEEECCCCCTTCCSSCCCEEEEEECTTT-CCEEEEETTSCEE
T ss_pred CCCCCC-EEEEEecCCcEEEEEEcCCCccc---ccccceeeecccccccccccceeEEEEEEcCCC-CEEEEecCCceEE
Confidence 99 765 89999999999999998651000 0155667777755 99999999998 8999999999999
Q ss_pred EEECCCCCeeEEEEecCC-CCcEEEEEEcCCCCcEEEEEeCCCc-EEEEE
Q 010748 431 LWDLSNNQPSCIASRNPK-AGAVFSVAFSEDSPFVLAIGGSKGK-LEIWD 478 (502)
Q Consensus 431 vwd~~~~~~~~~~~~~~~-~~~v~~~~~spd~~~ll~sg~~dg~-i~vwd 478 (502)
+||+.+++ .+..+..| .++|.+++ |++. +|++|+.||. .+.|.
T Consensus 277 vwd~~~~~--~~~~~~~~h~~~v~~~~--~~~~-~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 277 CWNLQTRK--KIKNFAKFNEDSVVKIA--CSDN-ILCLATSDDTFKTNAA 321 (342)
T ss_dssp EEETTTTE--EEEECCCCSSSEEEEEE--ECSS-EEEEEEECTHHHHCSS
T ss_pred EEcCccHh--HhhhhhcccCCCceEec--CCCC-eEEEEecCCccccccc
Confidence 99999887 56778888 99999999 9998 5999999998 44443
No 66
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=8.8e-32 Score=257.93 Aligned_cols=280 Identities=20% Similarity=0.349 Sum_probs=217.4
Q ss_pred cccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCCcE
Q 010748 142 LEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAI 221 (502)
Q Consensus 142 v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~dg~I 221 (502)
.+.|.|+|++ +||+|. ++ .++||..+.+.. ..+...| .......|++| +|++++||+|+.||.|
T Consensus 28 ~~~l~WS~~~-~lAvg~-D~---tV~iWd~~tg~~--~~~~~~~--~~~~~V~~v~~-------~~~~~~l~sgs~Dg~v 91 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-DN---SVYLWSASSGDI--LQLLQME--QPGEYISSVAW-------IKEGNYLAVGTSSAEV 91 (318)
T ss_dssp CBCEEECTTS-EEEEEE-TT---EEEEEETTTCCE--EEEEECC--STTCCEEEEEE-------CTTSSEEEEEETTSEE
T ss_pred ceEEEECCCC-EEEEEe-CC---EEEEEECCCCCE--EEEEEec--CCCCeEEEEEE-------CCCCCEEEEEECCCcE
Confidence 5779999886 676664 54 455555443321 1111111 11223367777 7999999999999999
Q ss_pred EEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeCCCC-e
Q 010748 222 EIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG-K 300 (502)
Q Consensus 222 ~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~-~ 300 (502)
+||++.++.. ...+.+|...+.++++.+ .+|++|+.++.+++|+.... .
T Consensus 92 ~iw~~~~~~~---------------------------~~~~~~h~~~~~~~~~~~---~~l~s~~~~~~~~~~~~~~~~~ 141 (318)
T 4ggc_A 92 QLWDVQQQKR---------------------------LRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEH 141 (318)
T ss_dssp EEEETTTTEE---------------------------EEEEECCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSC
T ss_pred EEeecCCcee---------------------------EEEecCccceEEEeecCC---CEEEEEecCCceEeeecCCCce
Confidence 9999976432 223457888888877764 48999999999999998876 4
Q ss_pred eeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCcc----ceEeecCCeeEEEeCCCCCCEEE--EEeCC
Q 010748 301 CNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG----FKWAVAADVESLAWDPHAEHSFV--VSLED 374 (502)
Q Consensus 301 ~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~----~~~~~~~~v~~v~~~~~~~~~~~--~~~~d 374 (502)
.+..+.+|...+.++.|++.+ .+|++++.||+|++||+++++... ....+.+.|.++.++|.+..++. +++.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 220 (318)
T 4ggc_A 142 HVATLSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD 220 (318)
T ss_dssp EEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTT
T ss_pred eEEEEcCccCceEEEEEcCCC-CEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCC
Confidence 567788999999999999999 899999999999999998765432 23346678999999998877654 45678
Q ss_pred CcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEe--CCCcEEEEECCCCCeeEEEEecCCCCcE
Q 010748 375 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS--TDKMVKLWDLSNNQPSCIASRNPKAGAV 452 (502)
Q Consensus 375 g~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s--~dg~i~vwd~~~~~~~~~~~~~~~~~~v 452 (502)
+.|++||.+.. .......+...+..+.|+|.+ ..+++++ .|+.|++||+.+++ ++..+.+|.+.|
T Consensus 221 ~~i~lwd~~~~----------~~~~~~~~~~~v~~~~~~~~~-~~~~~~sg~~d~~i~iwd~~~~~--~~~~l~gH~~~V 287 (318)
T 4ggc_A 221 RHIRIWNVCSG----------ACLSAVDAHSQVCSILWSPHY-KELISGHGFAQNQLVIWKYPTMA--KVAELKGHTSRV 287 (318)
T ss_dssp CEEEEEETTTC----------CEEEEEECSSCEEEEEEETTT-TEEEEEECTTTCCEEEEETTTCC--EEEEECCCSSCE
T ss_pred CEEEEEecccc----------cccccccceeeeeeeeecccc-cceEEEEEcCCCEEEEEECCCCc--EEEEEcCCCCCE
Confidence 99999999875 234445677889999999998 5555543 79999999999988 677888999999
Q ss_pred EEEEEcCCCCcEEEEEeCCCcEEEEECCCC
Q 010748 453 FSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 453 ~~~~~spd~~~ll~sg~~dg~i~vwd~~~~ 482 (502)
++++|+|++++ |++|+.||+|+|||+...
T Consensus 288 ~~l~~spdg~~-l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 288 LSLTMSPDGAT-VASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEEEECTTSSC-EEEEETTTEEEEECCSCC
T ss_pred EEEEEcCCCCE-EEEEecCCeEEEEECCCC
Confidence 99999999995 999999999999999764
No 67
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.9e-33 Score=281.27 Aligned_cols=257 Identities=16% Similarity=0.202 Sum_probs=200.0
Q ss_pred cceeeeecCCCCCCC-CCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceee
Q 010748 193 PLCMAWLDCPLKDRE-KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLG 271 (502)
Q Consensus 193 ~~~~~~~~~~~~~s~-~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 271 (502)
..|++| +| ++++||+|+.||.|+|||+.+.+. .....+.+|...|++
T Consensus 122 V~~l~~-------~P~~~~~lasGs~dg~i~lWd~~~~~~-------------------------~~~~~~~gH~~~V~~ 169 (435)
T 4e54_B 122 ATSLAW-------HPTHPSTVAVGSKGGDIMLWNFGIKDK-------------------------PTFIKGIGAGGSITG 169 (435)
T ss_dssp EEEEEE-------CSSCTTCEEEEETTSCEEEECSSCCSC-------------------------CEEECCCSSSCCCCE
T ss_pred EEEEEE-------eCCCCCEEEEEeCCCEEEEEECCCCCc-------------------------eeEEEccCCCCCEEE
Confidence 478888 66 578999999999999999975332 122234589999999
Q ss_pred EEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeecc--CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceE
Q 010748 272 LAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEH--HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW 349 (502)
Q Consensus 272 l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~--h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 349 (502)
|+|+|.++++|+||+.||+|++||+.++........ +...+.+++|+|++ .+|++|+.||.|++||++... .....
T Consensus 170 l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~g~~dg~i~~wd~~~~~-~~~~~ 247 (435)
T 4e54_B 170 LKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASS-RMVVTGDNVGNVILLNMDGKE-LWNLR 247 (435)
T ss_dssp EEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTT-TEEEEECSSSBEEEEESSSCB-CCCSB
T ss_pred EEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCC-CEEEEEeCCCcEeeeccCcce-eEEEe
Confidence 999996578999999999999999987655443333 34567899999999 899999999999999998654 33456
Q ss_pred eecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcE
Q 010748 350 AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMV 429 (502)
Q Consensus 350 ~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i 429 (502)
.|...|.+++|+|++..++++|+.|+.|++||+++... ...+....+|...|++++|+|++ .+|++++.||.|
T Consensus 248 ~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~------~~~~~~~~~h~~~v~~~~~spdg-~~l~s~~~D~~i 320 (435)
T 4e54_B 248 MHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRG------KASFLYSLPHRHPVNAACFSPDG-ARLLTTDQKSEI 320 (435)
T ss_dssp CCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCS------SSCCSBCCBCSSCEEECCBCTTS-SEEEEEESSSCE
T ss_pred cccceEEeeeecCCCceEEEEecCcceeeEEecccccc------cceEEEeeeccccccceeECCCC-CeeEEEcCCCEE
Confidence 78899999999999888999999999999999998632 12334456799999999999998 899999999999
Q ss_pred EEEECCCCCeeEEEEecCCCC------cEEEEEEcCCCCcEEEEEe------------CCCcEEEEECCCCccccccccC
Q 010748 430 KLWDLSNNQPSCIASRNPKAG------AVFSVAFSEDSPFVLAIGG------------SKGKLEIWDTLSDAGISNRFSK 491 (502)
Q Consensus 430 ~vwd~~~~~~~~~~~~~~~~~------~v~~~~~spd~~~ll~sg~------------~dg~i~vwd~~~~~~~~~~~~~ 491 (502)
+|||+.++.. ...+..|.. .+..+.|+|++.+ +++++ .++.|++||+.+++.+...+.+
T Consensus 321 ~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~ 397 (435)
T 4e54_B 321 RVYSASQWDC--PLGLIPHPHRHFQHLTPIKAAWHPRYNL-IVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDP 397 (435)
T ss_dssp EEEESSSSSS--EEEECCCCCCCCSSSCCCBCEECSSSSC-EEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCS
T ss_pred EEEECCCCcc--ceEEecccccccccceeEEEEEcCCCCE-EEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCC
Confidence 9999998763 333333221 2334566666653 33332 3467999999999988877655
Q ss_pred CC
Q 010748 492 YS 493 (502)
Q Consensus 492 ~~ 493 (502)
+.
T Consensus 398 ~~ 399 (435)
T 4e54_B 398 ES 399 (435)
T ss_dssp SC
T ss_pred CC
Confidence 44
No 68
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.5e-32 Score=261.41 Aligned_cols=255 Identities=16% Similarity=0.221 Sum_probs=197.1
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCC--CCCEEE
Q 010748 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDRE--KGNFMA 213 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~la 213 (502)
..|...|.+++|+|++++||+|+.++ .++||.+..........+..|.. ...+++| ++ ++++||
T Consensus 6 ~~h~~~V~~~~~s~~g~~las~s~D~---~v~iw~~~~~~~~~~~~l~gH~~----~V~~v~~-------s~~~~g~~l~ 71 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYGKRMATCSSDK---TIKIFEVEGETHKLIDTLTGHEG----PVWRVDW-------AHPKFGTILA 71 (297)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTS---CEEEEEBCSSCBCCCEEECCCSS----CEEEEEE-------CCGGGCSEEE
T ss_pred cCCcCceEEEEECCCCCEEEEEeCCC---EEEEEecCCCCcEEEEEEccccC----CeEEEEe-------cCCCcCCEEE
Confidence 35888999999999999999999887 56777765432211122233332 2367777 43 489999
Q ss_pred EecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCC-CcEEEEEecCCcEE
Q 010748 214 VGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEF-RNILASASADKQVK 292 (502)
Q Consensus 214 ~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~-~~~l~sgs~dg~v~ 292 (502)
+|+.|++|+|||+..+.. .....+.+|...|.+++|+|+. +.+|++|+.|++|+
T Consensus 72 s~s~D~~v~iWd~~~~~~-------------------------~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~ 126 (297)
T 2pm7_B 72 SCSYDGKVMIWKEENGRW-------------------------SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVS 126 (297)
T ss_dssp EEETTTEEEEEEBSSSCB-------------------------CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEE
T ss_pred EEcCCCEEEEEEcCCCce-------------------------EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEE
Confidence 999999999999975321 1122345799999999999972 46999999999999
Q ss_pred EEeCCCCe--eeEeeccCCCCeEEEEEcCCC------------CcEEEEEeCCCcEEEEecCCCCC----ccceEeecCC
Q 010748 293 IWDVAAGK--CNLTLEHHTDKVQAVAWNHHS------------PQILLSGSFDRSVVMKDARISTH----SGFKWAVAAD 354 (502)
Q Consensus 293 vwd~~~~~--~~~~~~~h~~~v~~l~~~~~~------------~~~l~s~s~dg~i~iwd~~~~~~----~~~~~~~~~~ 354 (502)
+||+.++. ....+.+|...|.+++|+|.+ .++|++|+.|++|++||+++... ...+..|...
T Consensus 127 ~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~ 206 (297)
T 2pm7_B 127 VVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW 206 (297)
T ss_dssp EEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC
T ss_pred EEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCc
Confidence 99998763 245678899999999999973 26899999999999999987652 2234467889
Q ss_pred eeEEEeCCCC--CCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEE--eccCCCeeEEEEcCCCCCEEEEEeCCCcEE
Q 010748 355 VESLAWDPHA--EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL--HAHDKAVCTISYNPLVPNLLATGSTDKMVK 430 (502)
Q Consensus 355 v~~v~~~~~~--~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~--~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~ 430 (502)
|.+++|+|++ ..++++++.|++|++||++.... ......+ ..|...|.+++|+|++ .+|++++.|+.|+
T Consensus 207 V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~------~~~~~~~~~~~~~~~v~~~~~s~~g-~~las~~~D~~v~ 279 (297)
T 2pm7_B 207 VRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQG------PWKKTLLKEEKFPDVLWRASWSLSG-NVLALSGGDNKVT 279 (297)
T ss_dssp EEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS------CCEEEESSSSCCSSCEEEEEECSSS-CCEEEEETTSCEE
T ss_pred eEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCC------ccceeeeecccCCCcEEEEEECCCC-CEEEEEcCCCcEE
Confidence 9999999985 46899999999999999986421 0111222 4678899999999998 8999999999999
Q ss_pred EEECCC
Q 010748 431 LWDLSN 436 (502)
Q Consensus 431 vwd~~~ 436 (502)
||+...
T Consensus 280 lw~~~~ 285 (297)
T 2pm7_B 280 LWKENL 285 (297)
T ss_dssp EEEECT
T ss_pred EEEECC
Confidence 999764
No 69
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.8e-32 Score=291.85 Aligned_cols=250 Identities=22% Similarity=0.314 Sum_probs=207.9
Q ss_pred ceeeeecCCCCCCCC-CCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeE
Q 010748 194 LCMAWLDCPLKDREK-GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL 272 (502)
Q Consensus 194 ~~~~~~~~~~~~s~~-~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 272 (502)
.|++| +++ +++|++|+.|++|+||++....... ......+.+|...|.++
T Consensus 386 ~~v~~-------~~~~~~~l~s~s~D~~i~~W~~~~~~~~~----------------------~~~~~~~~~h~~~v~~v 436 (694)
T 3dm0_A 386 TAIAT-------PIDNADIIVSASRDKSIILWKLTKDDKAY----------------------GVAQRRLTGHSHFVEDV 436 (694)
T ss_dssp EEEEC-------CTTCCSEEEEEETTSEEEEEECCCSTTCS----------------------CEEEEEEECCSSCEEEE
T ss_pred EEEEe-------cCCCCCEEEEEeCCCcEEEEEccCCCccc----------------------ccccceecCCCCcEEEE
Confidence 57766 554 6899999999999999997532211 12233456899999999
Q ss_pred EeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccc---eE
Q 010748 273 AWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF---KW 349 (502)
Q Consensus 273 ~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~---~~ 349 (502)
+|+|+ +.+|++|+.||+|+|||+.+++++..+.+|...|.+++|+|++ .+|++|+.|++|++||+........ ..
T Consensus 437 ~~s~~-g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~ 514 (694)
T 3dm0_A 437 VLSSD-GQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDN-RQIVSASRDRTIKLWNTLGECKYTISEGGE 514 (694)
T ss_dssp EECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEEEEECSSTT
T ss_pred EECCC-CCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCC-CEEEEEeCCCEEEEEECCCCcceeeccCCC
Confidence 99999 5699999999999999999999999999999999999999999 8899999999999999865432211 12
Q ss_pred eecCCeeEEEeCCCCC-CEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCc
Q 010748 350 AVAADVESLAWDPHAE-HSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKM 428 (502)
Q Consensus 350 ~~~~~v~~v~~~~~~~-~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~ 428 (502)
.|...|.+++|+|++. ..+++++.||.|++||+++. .....+.+|...|++++|+|++ .+|++|+.||.
T Consensus 515 ~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~---------~~~~~~~~h~~~v~~v~~spdg-~~l~sg~~Dg~ 584 (694)
T 3dm0_A 515 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNC---------KLRSTLAGHTGYVSTVAVSPDG-SLCASGGKDGV 584 (694)
T ss_dssp SCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTC---------CEEEEECCCSSCEEEEEECTTS-SEEEEEETTSB
T ss_pred CCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCC---------cEEEEEcCCCCCEEEEEEeCCC-CEEEEEeCCCe
Confidence 4677899999999763 47999999999999999976 6778889999999999999998 99999999999
Q ss_pred EEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccc
Q 010748 429 VKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 429 i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
|++||+.+++ ++..+. +...|.+++|+|++. +|+++ .++.|+|||+.++..+....
T Consensus 585 i~iwd~~~~~--~~~~~~-~~~~v~~~~~sp~~~-~l~~~-~~~~i~iwd~~~~~~~~~~~ 640 (694)
T 3dm0_A 585 VLLWDLAEGK--KLYSLE-ANSVIHALCFSPNRY-WLCAA-TEHGIKIWDLESKSIVEDLK 640 (694)
T ss_dssp CEEEETTTTE--EEECCB-CSSCEEEEEECSSSS-EEEEE-ETTEEEEEETTTTEEEEEEC
T ss_pred EEEEECCCCc--eEEEec-CCCcEEEEEEcCCCc-EEEEE-cCCCEEEEECCCCCChhhhc
Confidence 9999999887 445554 346799999999987 46554 56679999999988776543
No 70
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.6e-32 Score=272.81 Aligned_cols=296 Identities=18% Similarity=0.273 Sum_probs=224.7
Q ss_pred ccccccccCCCceEEE-EEecCCcceeEEEEEecCCCC--CCCeeeeeccccCCCcceeeeecCCCCCCC-CCCEEEEec
Q 010748 141 DLEDMTINPNDAVIVC-ARNEDDVSHLEVYILEESDGG--DPNLYVHHHIIIPAFPLCMAWLDCPLKDRE-KGNFMAVGS 216 (502)
Q Consensus 141 ~v~~~~~~p~~~~l~~-~~~~~~~~~l~v~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~la~g~ 216 (502)
....+.++|+...+++ ++.++ .+.||.++..... ....+..|.. ...+++| +| ++++||+|+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g---~i~v~~~~~~~~~~~~~~~~~~h~~----~V~~~~~-------~p~~~~~l~s~s 101 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGG---AFLVLPLGKTGRVDKNVPLVCGHTA----PVLDIAW-------CPHNDNVIASGS 101 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSC---CEEEEETTCCEECCTTCCCBCCCSS----CEEEEEE-------CTTCTTEEEEEE
T ss_pred CCCcEEECCCeEEEEEEEcCCC---EEEEEECccCCCCCCCCceEecCCC----CEEEEEe-------CCCCCCEEEEEe
Confidence 4556888888876665 45554 5666666433210 1112222322 2368887 67 899999999
Q ss_pred CCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeC
Q 010748 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV 296 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~ 296 (502)
.||.|+||++........ .......+.+|...|.+++|+|++.++|++|+.||+|++||+
T Consensus 102 ~dg~v~vw~~~~~~~~~~--------------------~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 161 (402)
T 2aq5_A 102 EDCTVMVWEIPDGGLVLP--------------------LREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDV 161 (402)
T ss_dssp TTSEEEEEECCTTCCSSC--------------------BCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEET
T ss_pred CCCeEEEEEccCCCCccc--------------------cCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEEC
Confidence 999999999986532211 012334556899999999999996679999999999999999
Q ss_pred CCCeeeEee--ccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccce-EeecCC-eeEEEeCCCCCCEEEEE-
Q 010748 297 AAGKCNLTL--EHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK-WAVAAD-VESLAWDPHAEHSFVVS- 371 (502)
Q Consensus 297 ~~~~~~~~~--~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~-v~~v~~~~~~~~~~~~~- 371 (502)
.+++++..+ ..|...|++++|+|++ .+|++++.||.|++||+++....... ..+.+. +.++.|+|++. ++++|
T Consensus 162 ~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~ 239 (402)
T 2aq5_A 162 GTGAAVLTLGPDVHPDTIYSVDWSRDG-ALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGK-ILTTGF 239 (402)
T ss_dssp TTTEEEEEECTTTCCSCEEEEEECTTS-SCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTE-EEEEEE
T ss_pred CCCCccEEEecCCCCCceEEEEECCCC-CEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCc-EEEEec
Confidence 999999999 8899999999999998 89999999999999999987766544 345554 89999999754 78888
Q ss_pred --eCCCcEEEEECCCCCCCCCCCCCccceEE-eccCCCeeEEEEcCCCCCEE-EEEeCCCcEEEEECCCCCe-eEEEEec
Q 010748 372 --LEDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLL-ATGSTDKMVKLWDLSNNQP-SCIASRN 446 (502)
Q Consensus 372 --~~dg~v~i~d~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l-~t~s~dg~i~vwd~~~~~~-~~~~~~~ 446 (502)
+.++.|++||+++.. .++... ..|...+.+++|+|++ .+| ++|+.||.|++|++.++++ .......
T Consensus 240 ~~~~d~~i~iwd~~~~~--------~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~ 310 (402)
T 2aq5_A 240 SRMSERQVALWDTKHLE--------EPLSLQELDTSSGVLLPFFDPDT-NIVYLCGKGDSSIRYFEITSEAPFLHYLSMF 310 (402)
T ss_dssp CTTCCEEEEEEETTBCS--------SCSEEEECCCCSSCEEEEEETTT-TEEEEEETTCSCEEEEEECSSTTCEEEEEEE
T ss_pred cCCCCceEEEEcCcccc--------CCceEEeccCCCceeEEEEcCCC-CEEEEEEcCCCeEEEEEecCCCcceEeeccc
Confidence 689999999999862 333333 3577889999999998 566 4666899999999998873 2222222
Q ss_pred CCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcc
Q 010748 447 PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 484 (502)
Q Consensus 447 ~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~ 484 (502)
.|.++|.+++|+|++.+ ++ +.++.+++|++.++..
T Consensus 311 ~~~~~v~~~~~sp~~~~-~~--s~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 311 SSKESQRGMGYMPKRGL-EV--NKCEIARFYKLHERKC 345 (402)
T ss_dssp CCSSCCSEEEECCGGGS-CG--GGTEEEEEEEEETTEE
T ss_pred ccCCcccceEEeccccc-ce--ecceeEEEEEcCCCcE
Confidence 36789999999999985 55 3566999999988654
No 71
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.8e-32 Score=276.26 Aligned_cols=288 Identities=16% Similarity=0.246 Sum_probs=226.3
Q ss_pred CCcccc-ccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEe
Q 010748 137 EDSEDL-EDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 137 ~~~~~v-~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g 215 (502)
.|...+ .++. +++++|++|+.++ .+++|....... ...+..| .....++.| ++++ +|++|
T Consensus 119 ~h~~~v~~~~~--~~~~~l~sgs~dg---~i~vwd~~~~~~--~~~~~~h----~~~V~~l~~-------~~~~-~l~s~ 179 (464)
T 3v7d_B 119 GHMTSVITCLQ--FEDNYVITGADDK---MIRVYDSINKKF--LLQLSGH----DGGVWALKY-------AHGG-ILVSG 179 (464)
T ss_dssp CCSSSCEEEEE--EETTEEEEEETTS---CEEEEETTTTEE--EEEECCC----SSCEEEEEE-------CSTT-EEEEE
T ss_pred CCCCCcEEEEE--ECCCEEEEEcCCC---cEEEEECCCCcE--EEEEeCC----CcCEEEEEE-------cCCC-EEEEE
Confidence 355554 5444 4678999999887 455555433321 1111223 233467777 5666 99999
Q ss_pred cCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccC-CCcEEEEEecCCcEEEE
Q 010748 216 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKE-FRNILASASADKQVKIW 294 (502)
Q Consensus 216 ~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~-~~~~l~sgs~dg~v~vw 294 (502)
+.||.|++||+.++. ....+.+|...|.+++|++. .+.+|++|+.||+|++|
T Consensus 180 s~dg~i~vwd~~~~~---------------------------~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vw 232 (464)
T 3v7d_B 180 STDRTVRVWDIKKGC---------------------------CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVW 232 (464)
T ss_dssp ETTSCEEEEETTTTE---------------------------EEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEE
T ss_pred eCCCCEEEEECCCCc---------------------------EEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEe
Confidence 999999999997532 22345579999999999952 25799999999999999
Q ss_pred eCCCCee-----------------------eEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEee
Q 010748 295 DVAAGKC-----------------------NLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV 351 (502)
Q Consensus 295 d~~~~~~-----------------------~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 351 (502)
|+.++.. +..+.+|...|.++. +++ .+|++|+.||.|++||+++.+.......|
T Consensus 233 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~-~~l~~~~~d~~i~vwd~~~~~~~~~~~~~ 309 (464)
T 3v7d_B 233 KLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS--GHG-NIVVSGSYDNTLIVWDVAQMKCLYILSGH 309 (464)
T ss_dssp ECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE--EET-TEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred eCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEc--CCC-CEEEEEeCCCeEEEEECCCCcEEEEecCC
Confidence 9987652 556788999998885 445 78999999999999999988877666678
Q ss_pred cCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEE
Q 010748 352 AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKL 431 (502)
Q Consensus 352 ~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~v 431 (502)
...|.+++|+|++. .+++|+.||.|++||++++ .++..+.+|...|.+++|++ .+|++++.||.|++
T Consensus 310 ~~~v~~~~~~~~~~-~l~sg~~dg~i~vwd~~~~---------~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~v~v 376 (464)
T 3v7d_B 310 TDRIYSTIYDHERK-RCISASMDTTIRIWDLENG---------ELMYTLQGHTALVGLLRLSD---KFLVSAAADGSIRG 376 (464)
T ss_dssp SSCEEEEEEETTTT-EEEEEETTSCEEEEETTTT---------EEEEEECCCSSCEEEEEECS---SEEEEEETTSEEEE
T ss_pred CCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCC---------cEEEEEeCCCCcEEEEEEcC---CEEEEEeCCCcEEE
Confidence 89999999999765 8999999999999999986 78889999999999999984 79999999999999
Q ss_pred EECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccccC
Q 010748 432 WDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSK 491 (502)
Q Consensus 432 wd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~~~ 491 (502)
||+.+... .... .+...+..++|+|++. +|++|+ +|.|++||+.+++.+.+.+..
T Consensus 377 wd~~~~~~--~~~~-~~~~~~~~~~~~~~~~-~l~~~~-dg~i~iwd~~~g~~~~~~~~~ 431 (464)
T 3v7d_B 377 WDANDYSR--KFSY-HHTNLSAITTFYVSDN-ILVSGS-ENQFNIYNLRSGKLVHANILK 431 (464)
T ss_dssp EETTTCCE--EEEE-ECTTCCCEEEEEECSS-EEEEEE-TTEEEEEETTTCCEEESCTTT
T ss_pred EECCCCce--eeee-cCCCCccEEEEEeCCC-EEEEec-CCeEEEEECCCCcEEehhhcc
Confidence 99998763 3332 2556678889999998 577777 899999999999998764433
No 72
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.2e-32 Score=309.80 Aligned_cols=295 Identities=17% Similarity=0.270 Sum_probs=236.6
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEe
Q 010748 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g 215 (502)
..|...|.+++|+|++++|++|+.++ .+.||....... ......| .....|++| +|++++||+|
T Consensus 612 ~~h~~~v~~~~~s~~~~~l~s~~~d~---~i~vw~~~~~~~--~~~~~~h----~~~v~~~~~-------s~~~~~l~s~ 675 (1249)
T 3sfz_A 612 RPHTDAVYHACFSQDGQRIASCGADK---TLQVFKAETGEK--LLDIKAH----EDEVLCCAF-------SSDDSYIATC 675 (1249)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTS---CEEEEETTTCCE--EEEECCC----SSCEEEEEE-------CTTSSEEEEE
T ss_pred ecccccEEEEEECCCCCEEEEEeCCC---eEEEEECCCCCE--EEEeccC----CCCEEEEEE-------ecCCCEEEEE
Confidence 35889999999999999999999887 456665544321 1111222 223367777 7999999999
Q ss_pred cCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccC-CCcEEEEEecCCcEEEE
Q 010748 216 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKE-FRNILASASADKQVKIW 294 (502)
Q Consensus 216 ~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~-~~~~l~sgs~dg~v~vw 294 (502)
+.||.|+|||+.++.. ...+.+|...|.+++|+|+ ...++++|+.||+|++|
T Consensus 676 ~~d~~v~vwd~~~~~~---------------------------~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vw 728 (1249)
T 3sfz_A 676 SADKKVKIWDSATGKL---------------------------VHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLW 728 (1249)
T ss_dssp ETTSEEEEEETTTCCE---------------------------EEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEE
T ss_pred eCCCeEEEEECCCCce---------------------------EEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEE
Confidence 9999999999976432 2234579999999999995 25589999999999999
Q ss_pred eCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccc---------------------------
Q 010748 295 DVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF--------------------------- 347 (502)
Q Consensus 295 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~--------------------------- 347 (502)
|+.+++++..+.+|...|++++|+|++ .+|++++.||+|++||+++......
T Consensus 729 d~~~~~~~~~~~~h~~~v~~~~~sp~~-~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 807 (1249)
T 3sfz_A 729 DLNQKECRNTMFGHTNSVNHCRFSPDD-ELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWS 807 (1249)
T ss_dssp ETTSSSEEEEECCCSSCEEEEEECSST-TEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBC
T ss_pred ECCCcchhheecCCCCCEEEEEEecCC-CEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEEC
Confidence 999999999999999999999999999 8999999999999999876532110
Q ss_pred ----------------------------eEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceE
Q 010748 348 ----------------------------KWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFT 399 (502)
Q Consensus 348 ----------------------------~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~ 399 (502)
...+...+.+++|+|++. ++++++.+|.|++|++.+. ..+..
T Consensus 808 ~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~dg~v~vwd~~~~---------~~~~~ 877 (1249)
T 3sfz_A 808 ADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDH-LAVIALSQYCVELWNIDSR---------LKVAD 877 (1249)
T ss_dssp TTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTT-EEEEECSSSCEEEEETTTT---------EEEEE
T ss_pred CCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCC-EEEEEeCCCeEEEEEcCCC---------ceeee
Confidence 013456788999999765 8999999999999999986 67788
Q ss_pred EeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCC------------------------------------------
Q 010748 400 LHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNN------------------------------------------ 437 (502)
Q Consensus 400 ~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~------------------------------------------ 437 (502)
+.+|...|++++|+|++ .+|++++.||.|++|++...
T Consensus 878 ~~~h~~~v~~v~~spdg-~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 956 (1249)
T 3sfz_A 878 CRGHLSWVHGVMFSPDG-SSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQI 956 (1249)
T ss_dssp ECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCE
T ss_pred cCCCccceEEEEECCCC-CEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceE
Confidence 88999999999999987 88999999999999985320
Q ss_pred -----------------------------------CeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCC
Q 010748 438 -----------------------------------QPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 438 -----------------------------------~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~ 482 (502)
.......+.+|.+.|++++|+|++++ |++++.||.|++|++.++
T Consensus 957 ~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~-l~s~~~dg~i~vwd~~~~ 1035 (1249)
T 3sfz_A 957 DYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKT-LISSSEDSVIQVWNWQTG 1035 (1249)
T ss_dssp EEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSC-EEEECSSSBEEEEETTTT
T ss_pred EEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCE-EEEEcCCCEEEEEECCCC
Confidence 00123345578889999999999995 899999999999999988
Q ss_pred cccc
Q 010748 483 AGIS 486 (502)
Q Consensus 483 ~~~~ 486 (502)
..+.
T Consensus 1036 ~~~~ 1039 (1249)
T 3sfz_A 1036 DYVF 1039 (1249)
T ss_dssp EEEC
T ss_pred ceEE
Confidence 7653
No 73
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-33 Score=286.10 Aligned_cols=238 Identities=12% Similarity=0.135 Sum_probs=185.1
Q ss_pred CCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCC-----CcE
Q 010748 207 EKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEF-----RNI 281 (502)
Q Consensus 207 ~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~-----~~~ 281 (502)
|++++||+|+.|++|+||++.+..... .....+.+|.+.|++++|+|++ +.+
T Consensus 171 ~~~~~laS~s~D~tI~iWd~~~~~~~~-----------------------~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~ 227 (524)
T 2j04_B 171 EHLEMFDKEKHSSCIQIFKMNTSTLHC-----------------------VKVQTIVHSFGEVWDLKWHEGCHAPHLVGC 227 (524)
T ss_dssp -----------CEEEEEEEEETTTCCE-----------------------EEEEEEEECCCSEEEEEECSSCCCSSSSCE
T ss_pred hhhhhhccCCCCceEEEEEccCCCCCc-----------------------eEEEEEEecCCcEEEEEECCCCCCCCCCce
Confidence 444555667788999999986533211 0111234678899999999962 469
Q ss_pred EEEEecCCcEEEEeCCCCee-----------eEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCcc-ceE
Q 010748 282 LASASADKQVKIWDVAAGKC-----------NLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG-FKW 349 (502)
Q Consensus 282 l~sgs~dg~v~vwd~~~~~~-----------~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~-~~~ 349 (502)
||+|+.||+|+|||+.+++. ...+.+|...|++++|++.+ .|++|+.||+|++||++++.... ...
T Consensus 228 LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~--~lasgs~DgtV~lWD~~~~~~~~~~~~ 305 (524)
T 2j04_B 228 LSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT--TVVCGFKNGFVAEFDLTDPEVPSFYDQ 305 (524)
T ss_dssp EEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS--EEEEEETTSEEEEEETTBCSSCSEEEE
T ss_pred EEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC--eEEEEeCCCEEEEEECCCCCCceEEee
Confidence 99999999999999987642 24678899999999999854 79999999999999999765433 355
Q ss_pred eecCCeeEE--EeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCC--CeeEEEEcCCCCCEEEEEeC
Q 010748 350 AVAADVESL--AWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDK--AVCTISYNPLVPNLLATGST 425 (502)
Q Consensus 350 ~~~~~v~~v--~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~--~v~~l~~sp~~~~~l~t~s~ 425 (502)
.|...|.++ +|+|++..+|++++.||+|++||+++. .+...+.+|.. .|.+++|+|++ ..|++++.
T Consensus 306 ~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~---------~~~~~~~~~~~~~~v~~v~fsp~~-~~l~s~~~ 375 (524)
T 2j04_B 306 VHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDI---------ATTKTTVSRFRGSNLVPVVYCPQI-YSYIYSDG 375 (524)
T ss_dssp CSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGH---------HHHCEEEEECSCCSCCCEEEETTT-TEEEEECS
T ss_pred cccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCC---------CcccccccccccCcccceEeCCCc-CeEEEeCC
Confidence 788999999 567765468999999999999999976 55666666654 58899999997 78999999
Q ss_pred CCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCC
Q 010748 426 DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 426 dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~ 482 (502)
|++|++||++++. ++..+.+|.+.|++++|+|++++ |++|+.||+|+|||+..+
T Consensus 376 d~tv~lwd~~~~~--~~~~l~gH~~~V~sva~Sp~g~~-l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 376 ASSLRAVPSRAAF--AVHPLVSRETTITAIGVSRLHPM-VLAGSADGSLIITNAARR 429 (524)
T ss_dssp SSEEEEEETTCTT--CCEEEEECSSCEEEEECCSSCCB-CEEEETTTEEECCBSCSS
T ss_pred CCcEEEEECcccc--cceeeecCCCceEEEEeCCCCCe-EEEEECCCEEEEEechHh
Confidence 9999999999877 44556679999999999999995 899999999999998654
No 74
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.1e-32 Score=274.96 Aligned_cols=280 Identities=21% Similarity=0.382 Sum_probs=219.8
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010748 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~ 216 (502)
.|...|.++.+ ++++|++|+.++ .+.+|....... ...+..|. ....|+.| ++++|++|+
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg---~i~iwd~~~~~~--~~~~~~h~----~~v~~l~~---------~~~~l~sg~ 190 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDN---TIKIWDKNTLEC--KRILTGHT----GSVLCLQY---------DERVIITGS 190 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSS---CEEEEESSSCCE--EEEECCCS----SCEEEEEC---------CSSEEEEEE
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCC---eEEEEeCCCCeE--EEEEcCCC----CcEEEEEE---------CCCEEEEEc
Confidence 45567777766 899999999887 456665443221 11122232 22356654 688999999
Q ss_pred CCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeC
Q 010748 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV 296 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~ 296 (502)
.||.|++||+.++.. ...+.+|...|.+++|++. +|++|+.||+|++||+
T Consensus 191 ~dg~i~vwd~~~~~~---------------------------~~~~~~h~~~v~~l~~~~~---~l~s~s~dg~i~vwd~ 240 (435)
T 1p22_A 191 SDSTVRVWDVNTGEM---------------------------LNTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWDM 240 (435)
T ss_dssp TTSCEEEEESSSCCE---------------------------EEEECCCCSCEEEEECCTT---EEEEEETTSCEEEEEC
T ss_pred CCCeEEEEECCCCcE---------------------------EEEEcCCCCcEEEEEEcCC---EEEEeeCCCcEEEEeC
Confidence 999999999976432 2234579999999999754 8999999999999999
Q ss_pred CCCeee---EeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEEEEEeC
Q 010748 297 AAGKCN---LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE 373 (502)
Q Consensus 297 ~~~~~~---~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~ 373 (502)
.+++.. ..+.+|...|.+++| ++ .+|++|+.||.|++||+++.........+...|.++.|++ .++++|+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~g~~ 314 (435)
T 1p22_A 241 ASPTDITLRRVLVGHRAAVNVVDF--DD-KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD---RLVVSGSS 314 (435)
T ss_dssp SSSSCCEEEEEECCCSSCEEEEEE--ET-TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEET---TEEEEEET
T ss_pred CCCCCceeeeEecCCCCcEEEEEe--CC-CEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeCC---CEEEEEeC
Confidence 988655 677889999999999 44 7899999999999999999887776777889999999953 48999999
Q ss_pred CCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCe-------eEEEEec
Q 010748 374 DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP-------SCIASRN 446 (502)
Q Consensus 374 dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~-------~~~~~~~ 446 (502)
||.|++||++++ .++..+.+|...|.+++|+ + .+|++|+.||.|++||+.++.. .++..+.
T Consensus 315 dg~i~iwd~~~~---------~~~~~~~~h~~~v~~~~~~--~-~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 382 (435)
T 1p22_A 315 DNTIRLWDIECG---------ACLRVLEGHEELVRCIRFD--N-KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLV 382 (435)
T ss_dssp TSCEEEEETTTC---------CEEEEECCCSSCEEEEECC--S-SEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEEC
T ss_pred CCeEEEEECCCC---------CEEEEEeCCcCcEEEEEec--C-CEEEEEeCCCcEEEEECCCCCCccccccchheeecc
Confidence 999999999986 7788899999999999993 3 8999999999999999865431 1577788
Q ss_pred CCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccc
Q 010748 447 PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 487 (502)
Q Consensus 447 ~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~ 487 (502)
+|.+.|++++| ++. .|++|+.||.|++||+.+......
T Consensus 383 ~h~~~v~~l~~--~~~-~l~s~s~Dg~i~iwd~~~~~~~~~ 420 (435)
T 1p22_A 383 EHSGRVFRLQF--DEF-QIVSSSHDDTILIWDFLNDPAAQA 420 (435)
T ss_dssp CCSSCCCCEEE--CSS-CEEECCSSSEEEEEC---------
T ss_pred CCCCCeEEEEe--CCC-EEEEEeCCCEEEEEECCCCCCccc
Confidence 99999999999 566 489999999999999988766543
No 75
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.1e-33 Score=276.44 Aligned_cols=249 Identities=14% Similarity=0.167 Sum_probs=192.4
Q ss_pred cceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeE
Q 010748 193 PLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL 272 (502)
Q Consensus 193 ~~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 272 (502)
..|++| +|++++||+|+.|+.|+||++.+.. ......+.+|...|+++
T Consensus 14 v~~~~~-------s~~g~~l~~~~~d~~i~iw~~~~~~-------------------------~~~~~~~~~h~~~v~~~ 61 (377)
T 3dwl_C 14 SYEHAF-------NSQRTEFVTTTATNQVELYEQDGNG-------------------------WKHARTFSDHDKIVTCV 61 (377)
T ss_dssp CSCCEE-------CSSSSEEECCCSSSCBCEEEEETTE-------------------------EEECCCBCCCSSCEEEE
T ss_pred EEEEEE-------CCCCCEEEEecCCCEEEEEEccCCc-------------------------eEEEEEEecCCceEEEE
Confidence 367777 7999999999999999999987421 02233456899999999
Q ss_pred EeccCCCcEEEEEecCCcEEEEeCCCCe---eeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCC---cc
Q 010748 273 AWNKEFRNILASASADKQVKIWDVAAGK---CNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH---SG 346 (502)
Q Consensus 273 ~~~~~~~~~l~sgs~dg~v~vwd~~~~~---~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~---~~ 346 (502)
+|+|+ +.+|++|+.|++|++||+.+++ +...+..|...|.+++|+|++ .+|++++.|+.|++||+++... ..
T Consensus 62 ~~s~~-~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~ 139 (377)
T 3dwl_C 62 DWAPK-SNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNE-DKFAVGSGARVISVCYFEQENDWWVSK 139 (377)
T ss_dssp EECTT-TCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTS-SCCEEEESSSCEEECCC-----CCCCE
T ss_pred EEeCC-CCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCC-CEEEEEecCCeEEEEEECCcccceeee
Confidence 99999 5699999999999999999887 677788899999999999998 8999999999999999998763 33
Q ss_pred ceEe-ecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCC---------CCCccceEEeccCCCeeEEEEcCCC
Q 010748 347 FKWA-VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDS---------TSQQSSFTLHAHDKAVCTISYNPLV 416 (502)
Q Consensus 347 ~~~~-~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~---------~~~~~~~~~~~h~~~v~~l~~sp~~ 416 (502)
.... |...|.+++|+|++. ++++++.||.|++||++........ ....++..+ .|...|++++|+|++
T Consensus 140 ~~~~~h~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~ 217 (377)
T 3dwl_C 140 HLKRPLRSTILSLDWHPNNV-LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSG 217 (377)
T ss_dssp EECSSCCSCEEEEEECTTSS-EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTS
T ss_pred EeecccCCCeEEEEEcCCCC-EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCC
Confidence 3334 788999999999765 8999999999999999643211100 002334444 899999999999998
Q ss_pred CCEEEEEeCCCcEEEEECCCCCe--eEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECC
Q 010748 417 PNLLATGSTDKMVKLWDLSNNQP--SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTL 480 (502)
Q Consensus 417 ~~~l~t~s~dg~i~vwd~~~~~~--~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~ 480 (502)
.+|++++.||.|++||+.+++. ..+..+..|..+|.+++|+|++. +|++|+.++.+ +|+..
T Consensus 218 -~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 218 -NALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESA-IVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp -SCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTE-EEEEESSSSEE-EECCC
T ss_pred -CEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCC-EEEEEcCCcEE-EEEeC
Confidence 8999999999999999998874 12566778999999999999998 47777666555 77665
No 76
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.8e-32 Score=271.05 Aligned_cols=245 Identities=22% Similarity=0.303 Sum_probs=201.8
Q ss_pred CCCCC-EEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEE
Q 010748 206 REKGN-FMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 284 (502)
Q Consensus 206 s~~~~-~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~s 284 (502)
+|+.. ++++|+.+|.|+||++...... ......+.+|...|++++|+|.++.+|++
T Consensus 43 ~~~~~~~~~~~~~~g~i~v~~~~~~~~~-----------------------~~~~~~~~~h~~~V~~~~~~p~~~~~l~s 99 (402)
T 2aq5_A 43 NPKFMALICEASGGGAFLVLPLGKTGRV-----------------------DKNVPLVCGHTAPVLDIAWCPHNDNVIAS 99 (402)
T ss_dssp CSSEEEEEBCCSSSCCEEEEETTCCEEC-----------------------CTTCCCBCCCSSCEEEEEECTTCTTEEEE
T ss_pred CCCeEEEEEEEcCCCEEEEEECccCCCC-----------------------CCCCceEecCCCCEEEEEeCCCCCCEEEE
Confidence 55543 4445789999999999642111 12223456899999999999933779999
Q ss_pred EecCCcEEEEeCCCC-------eeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccce--EeecCCe
Q 010748 285 ASADKQVKIWDVAAG-------KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK--WAVAADV 355 (502)
Q Consensus 285 gs~dg~v~vwd~~~~-------~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~--~~~~~~v 355 (502)
|+.||+|+||++.++ +++..+.+|...|.+++|+|++.++|++++.||.|++||+++++..... ..|...|
T Consensus 100 ~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v 179 (402)
T 2aq5_A 100 GSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTI 179 (402)
T ss_dssp EETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCE
T ss_pred EeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCce
Confidence 999999999999988 6678889999999999999998679999999999999999988766544 4588899
Q ss_pred eEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEE-eccCCC-eeEEEEcCCCCCEEEEE---eCCCcEE
Q 010748 356 ESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKA-VCTISYNPLVPNLLATG---STDKMVK 430 (502)
Q Consensus 356 ~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~-~~h~~~-v~~l~~sp~~~~~l~t~---s~dg~i~ 430 (502)
.+++|+|++. ++++++.||.|++||++++ ..+..+ ..|.+. +.++.|+|++ .+|++| +.|+.|+
T Consensus 180 ~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~g~~~~~d~~i~ 248 (402)
T 2aq5_A 180 YSVDWSRDGA-LICTSCRDKRVRVIEPRKG---------TVVAEKDRPHEGTRPVHAVFVSEG-KILTTGFSRMSERQVA 248 (402)
T ss_dssp EEEEECTTSS-CEEEEETTSEEEEEETTTT---------EEEEEEECSSCSSSCCEEEECSTT-EEEEEEECTTCCEEEE
T ss_pred EEEEECCCCC-EEEEEecCCcEEEEeCCCC---------ceeeeeccCCCCCcceEEEEcCCC-cEEEEeccCCCCceEE
Confidence 9999999765 7999999999999999986 666777 688776 8999999987 889998 7899999
Q ss_pred EEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcc
Q 010748 431 LWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 484 (502)
Q Consensus 431 vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~ 484 (502)
+||+++...........+...+.+++|+|++.+++++|+.||.|++|++.+++.
T Consensus 249 iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 249 LWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP 302 (402)
T ss_dssp EEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT
T ss_pred EEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc
Confidence 999998664222333356678999999999997556777899999999999875
No 77
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.9e-32 Score=265.67 Aligned_cols=248 Identities=17% Similarity=0.224 Sum_probs=205.0
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEE
Q 010748 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.|++| +|++++||+|+.++.|+||++.... ......+.+|...|.+++
T Consensus 12 ~~~~~-------s~~~~~l~~~~~d~~v~i~~~~~~~-------------------------~~~~~~~~~h~~~v~~~~ 59 (372)
T 1k8k_C 12 SCHAW-------NKDRTQIAICPNNHEVHIYEKSGNK-------------------------WVQVHELKEHNGQVTGVD 59 (372)
T ss_dssp CEEEE-------CTTSSEEEEECSSSEEEEEEEETTE-------------------------EEEEEEEECCSSCEEEEE
T ss_pred EEEEE-------CCCCCEEEEEeCCCEEEEEeCCCCc-------------------------EEeeeeecCCCCcccEEE
Confidence 67777 7999999999999999999986432 112334557999999999
Q ss_pred eccCCCcEEEEEecCCcEEEEeCCCCeeeEe--eccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCc----cc
Q 010748 274 WNKEFRNILASASADKQVKIWDVAAGKCNLT--LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS----GF 347 (502)
Q Consensus 274 ~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~----~~ 347 (502)
|+|+ +.+|++|+.||.|++||+.+++.... +..|...|.+++|+|++ .+|++++.++.|++||++..... ..
T Consensus 60 ~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i~d~~~~~~~~~~~~~ 137 (372)
T 1k8k_C 60 WAPD-SNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNE-KKFAVGSGSRVISICYFEQENDWWVCKHI 137 (372)
T ss_dssp EETT-TTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTS-SEEEEEETTSSEEEEEEETTTTEEEEEEE
T ss_pred EeCC-CCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCC-CEEEEEeCCCEEEEEEecCCCcceeeeee
Confidence 9998 56999999999999999998875444 46789999999999998 89999999999999999987642 11
Q ss_pred eEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCC---------CCCCccceEEeccCCCeeEEEEcCCCCC
Q 010748 348 KWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPD---------STSQQSSFTLHAHDKAVCTISYNPLVPN 418 (502)
Q Consensus 348 ~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~---------~~~~~~~~~~~~h~~~v~~l~~sp~~~~ 418 (502)
...+...|.+++|+|++. ++++++.+|.|++||++....... ......+..+..|...|++++|+|++ .
T Consensus 138 ~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~ 215 (372)
T 1k8k_C 138 KKPIRSTVLSLDWHPNSV-LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANG-S 215 (372)
T ss_dssp CTTCCSCEEEEEECTTSS-EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSS-S
T ss_pred ecccCCCeeEEEEcCCCC-EEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCC-C
Confidence 234578899999999765 899999999999999763211100 01135677778899999999999998 8
Q ss_pred EEEEEeCCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010748 419 LLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 419 ~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~ 481 (502)
+|++++.|+.|++||+++++ ++..+..|..+|.+++|+|++. +|++| .++.|++|++.+
T Consensus 216 ~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~-~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 216 RVAWVSHDSTVCLADADKKM--AVATLASETLPLLAVTFITESS-LVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEEEETTTEEEEEEGGGTT--EEEEEECSSCCEEEEEEEETTE-EEEEE-TTSSCEEEEEET
T ss_pred EEEEEeCCCEEEEEECCCCc--eeEEEccCCCCeEEEEEecCCC-EEEEE-eCCeEEEEEccC
Confidence 99999999999999999887 5667778888999999999998 46666 899999999988
No 78
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=5.9e-32 Score=267.75 Aligned_cols=250 Identities=15% Similarity=0.236 Sum_probs=209.7
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEE
Q 010748 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.|++| +| ++|++|+.||.|+||++.......+ ......+.+|...|++++
T Consensus 20 ~~~~~-------~~--~~l~s~~~dg~i~iw~~~~~~~~~~---------------------~~~~~~~~~h~~~v~~~~ 69 (397)
T 1sq9_A 20 FSVSA-------CN--SFTVSCSGDGYLKVWDNKLLDNENP---------------------KDKSYSHFVHKSGLHHVD 69 (397)
T ss_dssp EEEEE-------CS--SEEEEEETTSEEEEEESBCCTTCCG---------------------GGGEEEEECCTTCEEEEE
T ss_pred EEEEe-------cC--CeEEEEcCCCEEEEEECCCcccccC---------------------CCcceEEecCCCcEEEEE
Confidence 68887 45 8999999999999999976442211 123334558999999999
Q ss_pred eccC---CC---cEEEEEecCCcEEEEeCCCCee-----eEeeccC-----CCCeEEEEEc----CCCCcE-EEEEeCCC
Q 010748 274 WNKE---FR---NILASASADKQVKIWDVAAGKC-----NLTLEHH-----TDKVQAVAWN----HHSPQI-LLSGSFDR 332 (502)
Q Consensus 274 ~~~~---~~---~~l~sgs~dg~v~vwd~~~~~~-----~~~~~~h-----~~~v~~l~~~----~~~~~~-l~s~s~dg 332 (502)
|+|+ .+ .+|++|+.||.|++|++.+++. +..+..| ...|.+++|+ |++ .+ |++++.||
T Consensus 70 ~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~l~~~~~dg 148 (397)
T 1sq9_A 70 VLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL-SHRLVATDVKG 148 (397)
T ss_dssp EEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTS
T ss_pred EecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCC-ceEEEEEeCCC
Confidence 9998 23 5899999999999999998887 8888888 5999999999 988 77 99999999
Q ss_pred cEEEEecCC------CCCcc-----ceE-------eecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCC
Q 010748 333 SVVMKDARI------STHSG-----FKW-------AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQ 394 (502)
Q Consensus 333 ~i~iwd~~~------~~~~~-----~~~-------~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~ 394 (502)
.|++||++. ..... ... .+...+.+++|+|++ ++++++.+|.|++||+++.
T Consensus 149 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~--------- 217 (397)
T 1sq9_A 149 TTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTL--------- 217 (397)
T ss_dssp CEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTT---------
T ss_pred cEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCC---------
Confidence 999999998 55443 332 257789999999986 8999999999999999986
Q ss_pred ccceEEec---c---CCCeeEEEEcCCCCCEEEEEeCC---CcEEEEECCCCCeeEEEEecC-------------CCCcE
Q 010748 395 QSSFTLHA---H---DKAVCTISYNPLVPNLLATGSTD---KMVKLWDLSNNQPSCIASRNP-------------KAGAV 452 (502)
Q Consensus 395 ~~~~~~~~---h---~~~v~~l~~sp~~~~~l~t~s~d---g~i~vwd~~~~~~~~~~~~~~-------------~~~~v 452 (502)
.++..+.. | ...|.+++|+|++ .+|++++.| +.|++||+.+++ .+..+.. |...|
T Consensus 218 ~~~~~~~~~~~h~~~~~~i~~i~~~~~~-~~l~~~~~d~~~g~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v 294 (397)
T 1sq9_A 218 RPLYNFESQHSMINNSNSIRSVKFSPQG-SLLAIAHDSNSFGCITLYETEFGE--RIGSLSVPTHSSQASLGEFAHSSWV 294 (397)
T ss_dssp EEEEEEECCC---CCCCCEEEEEECSST-TEEEEEEEETTEEEEEEEETTTCC--EEEEECBC--------CCBSBSSCE
T ss_pred ceeEEEeccccccccCCccceEEECCCC-CEEEEEecCCCCceEEEEECCCCc--ccceeccCcccccccccccccCCcE
Confidence 77788888 9 9999999999997 899999999 999999999887 4556666 88999
Q ss_pred EEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccc
Q 010748 453 FSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 453 ~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
.+++|+|++. +|++++.||.|+|||+.+++.+....
T Consensus 295 ~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 295 MSLSFNDSGE-TLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp EEEEECSSSS-EEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 9999999999 59999999999999999998877665
No 79
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3e-31 Score=267.34 Aligned_cols=280 Identities=21% Similarity=0.366 Sum_probs=226.1
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010748 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~ 216 (502)
.|.+.+.. ++++++++|++|+.++ .++||.+..... ...+..|. ....++.| ++++|++|+
T Consensus 116 ~h~~~v~~-~~~~~g~~l~sg~~dg---~i~vwd~~~~~~--~~~~~~h~----~~v~~~~~---------~~~~l~s~~ 176 (445)
T 2ovr_B 116 GHDDHVIT-CLQFCGNRIVSGSDDN---TLKVWSAVTGKC--LRTLVGHT----GGVWSSQM---------RDNIIISGS 176 (445)
T ss_dssp CSTTSCEE-EEEEETTEEEEEETTS---CEEEEETTTCCE--EEECCCCS----SCEEEEEE---------ETTEEEEEE
T ss_pred ccCCCcEE-EEEEcCCEEEEEECCC---cEEEEECCCCcE--EEEEcCCC----CCEEEEEe---------cCCEEEEEe
Confidence 36655433 4667799999999887 456665543321 11112232 22356665 377999999
Q ss_pred CCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeC
Q 010748 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV 296 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~ 296 (502)
.||.|++||+.++.. ...+.+|...|.+++|++. .|++|+.||+|++||+
T Consensus 177 ~dg~i~vwd~~~~~~---------------------------~~~~~~h~~~v~~~~~~~~---~l~s~s~dg~i~~wd~ 226 (445)
T 2ovr_B 177 TDRTLKVWNAETGEC---------------------------IHTLYGHTSTVRCMHLHEK---RVVSGSRDATLRVWDI 226 (445)
T ss_dssp TTSCEEEEETTTTEE---------------------------EEEECCCSSCEEEEEEETT---EEEEEETTSEEEEEES
T ss_pred CCCeEEEEECCcCcE---------------------------EEEECCCCCcEEEEEecCC---EEEEEeCCCEEEEEEC
Confidence 999999999975322 2234579999999999743 7999999999999999
Q ss_pred CCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEEEEEeCCCc
Q 010748 297 AAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGT 376 (502)
Q Consensus 297 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~ 376 (502)
.+++++..+.+|...|.++.| ++ .++++|+.||.|++||+++.........+...|.++.|+ ...+++++.||.
T Consensus 227 ~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~ 300 (445)
T 2ovr_B 227 ETGQCLHVLMGHVAAVRCVQY--DG-RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD---GIHVVSGSLDTS 300 (445)
T ss_dssp SSCCEEEEEECCSSCEEEEEE--CS-SCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEEC---SSEEEEEETTSC
T ss_pred CCCcEEEEEcCCcccEEEEEE--CC-CEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEEC---CCEEEEEeCCCe
Confidence 999999999999999999999 44 789999999999999999887766666788899999993 348999999999
Q ss_pred EEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecC---CCCcEE
Q 010748 377 IKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNP---KAGAVF 453 (502)
Q Consensus 377 v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~---~~~~v~ 453 (502)
|++||++++ ..+..+.+|...+.++.+++ .+|++|+.||.|++||+.+++ .+..+.. |...|.
T Consensus 301 i~i~d~~~~---------~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~~~~~~~v~ 366 (445)
T 2ovr_B 301 IRVWDVETG---------NCIHTLTGHQSLTSGMELKD---NILVSGNADSTVKIWDIKTGQ--CLQTLQGPNKHQSAVT 366 (445)
T ss_dssp EEEEETTTC---------CEEEEECCCCSCEEEEEEET---TEEEEEETTSCEEEEETTTCC--EEEEECSTTSCSSCEE
T ss_pred EEEEECCCC---------CEEEEEcCCcccEEEEEEeC---CEEEEEeCCCeEEEEECCCCc--EEEEEccCCCCCCCEE
Confidence 999999987 77888899999999998863 799999999999999999887 4455554 888999
Q ss_pred EEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010748 454 SVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 454 ~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~ 488 (502)
+++|++ . +|++|+.||.|++||+.+++.+...
T Consensus 367 ~~~~~~--~-~l~s~~~dg~v~iwd~~~~~~~~~~ 398 (445)
T 2ovr_B 367 CLQFNK--N-FVITSSDDGTVKLWDLKTGEFIRNL 398 (445)
T ss_dssp EEEECS--S-EEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEEECC--C-EEEEEeCCCeEEEEECCCCceeeee
Confidence 999964 4 5999999999999999999888766
No 80
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=9.9e-33 Score=265.12 Aligned_cols=256 Identities=19% Similarity=0.247 Sum_probs=194.4
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCC-CCCEEEE
Q 010748 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDRE-KGNFMAV 214 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~la~ 214 (502)
..|...|.+++|+|++++||+|+.++ .++||............+..|. ....+++|. +| ++++||+
T Consensus 10 ~~H~~~V~~v~~s~~g~~lasgs~D~---~v~lwd~~~~~~~~~~~l~gH~----~~V~~v~~~------~~~~~~~l~s 76 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYGTRLATCSSDR---SVKIFDVRNGGQILIADLRGHE----GPVWQVAWA------HPMYGNILAS 76 (316)
T ss_dssp ----CCEEEEEECGGGCEEEEEETTT---EEEEEEEETTEEEEEEEEECCS----SCEEEEEEC------CGGGSSCEEE
T ss_pred ccccCeEEEeeEcCCCCEEEEEeCCC---eEEEEEecCCCcEEEEEEcCCC----ccEEEEEeC------CCCCCCEEEE
Confidence 45889999999999999999999887 6788877654210001112232 233677773 12 4899999
Q ss_pred ecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCC-CcEEEEEecCCcEEE
Q 010748 215 GSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEF-RNILASASADKQVKI 293 (502)
Q Consensus 215 g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~-~~~l~sgs~dg~v~v 293 (502)
|+.|++|+|||+.++.. .....+.+|...|++++|+|+. +.+|++|+.|++|++
T Consensus 77 ~s~D~~v~iWd~~~~~~-------------------------~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~l 131 (316)
T 3bg1_A 77 CSYDRKVIIWREENGTW-------------------------EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISL 131 (316)
T ss_dssp EETTSCEEEECCSSSCC-------------------------CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEE
T ss_pred EECCCEEEEEECCCCcc-------------------------eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEE
Confidence 99999999999874321 1122345799999999999973 468999999999999
Q ss_pred EeCCCCe---eeEeeccCCCCeEEEEEcCCC----------------CcEEEEEeCCCcEEEEecCCCC---CccceEee
Q 010748 294 WDVAAGK---CNLTLEHHTDKVQAVAWNHHS----------------PQILLSGSFDRSVVMKDARIST---HSGFKWAV 351 (502)
Q Consensus 294 wd~~~~~---~~~~~~~h~~~v~~l~~~~~~----------------~~~l~s~s~dg~i~iwd~~~~~---~~~~~~~~ 351 (502)
||+..+. ....+.+|...|.+++|+|+. ..+|++|+.|++|++||++... ....+..|
T Consensus 132 wd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h 211 (316)
T 3bg1_A 132 LTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAH 211 (316)
T ss_dssp EEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCC
T ss_pred EecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccC
Confidence 9998763 245567899999999999973 2689999999999999997543 23334568
Q ss_pred cCCeeEEEeCCCC---CCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCc
Q 010748 352 AADVESLAWDPHA---EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKM 428 (502)
Q Consensus 352 ~~~v~~v~~~~~~---~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~ 428 (502)
...|.+++|+|++ ..+|++++.||+|++|++...... ......+..|...|.+++|+|++ .+|++++.|+.
T Consensus 212 ~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~-----~~~~~~~~~~~~~v~~v~~sp~g-~~las~~~D~~ 285 (316)
T 3bg1_A 212 SDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSN-----TWSPKLLHKFNDVVWHVSWSITA-NILAVSGGDNK 285 (316)
T ss_dssp SSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCC-----CCBCCEEEECSSCEEEEEECTTT-CCEEEEESSSC
T ss_pred CCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCcccc-----chhhhhhhcCCCcEEEEEEcCCC-CEEEEEcCCCe
Confidence 8899999999975 358999999999999999863110 11234456789999999999998 89999999999
Q ss_pred EEEEECC
Q 010748 429 VKLWDLS 435 (502)
Q Consensus 429 i~vwd~~ 435 (502)
|+||+..
T Consensus 286 v~lw~~~ 292 (316)
T 3bg1_A 286 VTLWKES 292 (316)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 9999975
No 81
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.5e-31 Score=280.11 Aligned_cols=303 Identities=13% Similarity=0.194 Sum_probs=237.4
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCC--CCCCeeeeeccccCCC-cceeeeecCCCCCCC--CCCE
Q 010748 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDG--GDPNLYVHHHIIIPAF-PLCMAWLDCPLKDRE--KGNF 211 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~--~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~s~--~~~~ 211 (502)
.|...|.+++|+|++++|++++ ++ .+.||.+..... .....+..|. .. ..|++| +| ++++
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~-~~---~v~v~~~~~~~~~~~~~~~~~~h~----~~~v~~~~~-------sp~~~~~~ 80 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPC-GK---SAFVRCLDDGDSKVPPVVQFTGHG----SSVVTTVKF-------SPIKGSQY 80 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEE-TT---EEEEEECCSSCCSSCSEEEECTTT----TSCEEEEEE-------CSSTTCCE
T ss_pred CccCceeEEEECCCCCEEEEec-CC---eEEEEECCCCCCccccceEEecCC----CceEEEEEE-------CcCCCCCE
Confidence 3678899999999999999998 43 566666654310 1111222222 22 467777 78 9999
Q ss_pred EEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecC---
Q 010748 212 MAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD--- 288 (502)
Q Consensus 212 la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~d--- 288 (502)
||+|+.||.|+||++.++..... ........+..|...|.+++|+|+ +.+|++++.+
T Consensus 81 l~s~~~dg~v~vw~~~~~~~~~~-------------------~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~~~~~ 140 (615)
T 1pgu_A 81 LCSGDESGKVIVWGWTFDKESNS-------------------VEVNVKSEFQVLAGPISDISWDFE-GRRLCVVGEGRDN 140 (615)
T ss_dssp EEEEETTSEEEEEEEEEEGGGTE-------------------EEEEEEEEEECCSSCEEEEEECTT-SSEEEEEECCSSC
T ss_pred EEEecCCCEEEEEeCCCCccccc-------------------ccccccchhhcccccEEEEEEeCC-CCEEEEeccCCCC
Confidence 99999999999999963210000 012233345578999999999999 5688898887
Q ss_pred -CcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecC---CeeEEEeCCCC
Q 010748 289 -KQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAA---DVESLAWDPHA 364 (502)
Q Consensus 289 -g~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~---~v~~v~~~~~~ 364 (502)
+.|++|| .++.+..+.+|...|.+++|+|++..+|++++.|+.|++||+++.+.......+.. .|.+++|+|++
T Consensus 141 ~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 218 (615)
T 1pgu_A 141 FGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDS 218 (615)
T ss_dssp SEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTT
T ss_pred ccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCC
Confidence 6888888 67788899999999999999999955899999999999999988776665556777 89999999983
Q ss_pred CCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEE-e---ccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCee
Q 010748 365 EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-H---AHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS 440 (502)
Q Consensus 365 ~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~-~---~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~ 440 (502)
..++++++.+|.|++||++++ ..+..+ . .|...|.+++|+ ++ .+|++++.|+.|++||+.+++.
T Consensus 219 ~~~l~~~~~dg~i~vwd~~~~---------~~~~~~~~~~~~~~~~v~~~~~~-~~-~~l~~~~~d~~i~~wd~~~~~~- 286 (615)
T 1pgu_A 219 GEFVITVGSDRKISCFDGKSG---------EFLKYIEDDQEPVQGGIFALSWL-DS-QKFATVGADATIRVWDVTTSKC- 286 (615)
T ss_dssp CCEEEEEETTCCEEEEETTTC---------CEEEECCBTTBCCCSCEEEEEES-SS-SEEEEEETTSEEEEEETTTTEE-
T ss_pred CCEEEEEeCCCeEEEEECCCC---------CEeEEecccccccCCceEEEEEc-CC-CEEEEEcCCCcEEEEECCCCcE-
Confidence 448999999999999999886 666777 5 899999999999 66 9999999999999999998874
Q ss_pred EEEEecCC----CCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccccC
Q 010748 441 CIASRNPK----AGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSK 491 (502)
Q Consensus 441 ~~~~~~~~----~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~~~ 491 (502)
+..+..+ ...+.++.|. ++. .|++++.+|.|++||+.+++.+.....+
T Consensus 287 -~~~~~~~~~~~~~~~~~~~~~-~~~-~l~~~~~~g~i~~~d~~~~~~~~~~~~~ 338 (615)
T 1pgu_A 287 -VQKWTLDKQQLGNQQVGVVAT-GNG-RIISLSLDGTLNFYELGHDEVLKTISGH 338 (615)
T ss_dssp -EEEEECCTTCGGGCEEEEEEE-ETT-EEEEEETTSCEEEEETTEEEEEEEECCC
T ss_pred -EEEEcCCCCcccCceeEEEeC-CCC-eEEEEECCCCEEEEECCCCcEEEEEeCC
Confidence 4444444 4678888886 676 5889999999999999987776655443
No 82
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.2e-32 Score=264.09 Aligned_cols=290 Identities=14% Similarity=0.268 Sum_probs=223.2
Q ss_pred CCCccccccccccCC---CceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEE
Q 010748 136 DEDSEDLEDMTINPN---DAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFM 212 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~---~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l 212 (502)
..|.+.|.+++|+|+ +++|++|+.++ .+.||.+..........+..|. ....+++| +|++++|
T Consensus 36 ~~h~~~v~~~~~~~~~~~g~~l~~~~~dg---~i~iw~~~~~~~~~~~~~~~h~----~~v~~~~~-------~~~~~~l 101 (368)
T 3mmy_A 36 SSPDDSIGCLSFSPPTLPGNFLIAGSWAN---DVRCWEVQDSGQTIPKAQQMHT----GPVLDVCW-------SDDGSKV 101 (368)
T ss_dssp SCCSSCEEEEEECCTTSSSEEEEEEETTS---EEEEEEECTTSCEEEEEEEECS----SCEEEEEE-------CTTSSEE
T ss_pred cCCCCceEEEEEcCCCCCceEEEEECCCC---cEEEEEcCCCCceeEEEecccc----CCEEEEEE-------CcCCCEE
Confidence 468999999999999 59999999887 5677777653321101122232 33467777 7899999
Q ss_pred EEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEe--ccCCCcEEEEEecCCc
Q 010748 213 AVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAW--NKEFRNILASASADKQ 290 (502)
Q Consensus 213 a~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~--~~~~~~~l~sgs~dg~ 290 (502)
++|+.||.|++||+.+.... .+.+|...|++++| +|+ +.+|++|+.||.
T Consensus 102 ~s~~~dg~v~iwd~~~~~~~----------------------------~~~~~~~~v~~~~~~~~~~-~~~l~~~~~dg~ 152 (368)
T 3mmy_A 102 FTASCDKTAKMWDLSSNQAI----------------------------QIAQHDAPVKTIHWIKAPN-YSCVMTGSWDKT 152 (368)
T ss_dssp EEEETTSEEEEEETTTTEEE----------------------------EEEECSSCEEEEEEEECSS-CEEEEEEETTSE
T ss_pred EEEcCCCcEEEEEcCCCCce----------------------------eeccccCceEEEEEEeCCC-CCEEEEccCCCc
Confidence 99999999999999753211 13369999999999 787 668999999999
Q ss_pred EEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceE--eecCCeeEEEeCCCCC---
Q 010748 291 VKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW--AVAADVESLAWDPHAE--- 365 (502)
Q Consensus 291 v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~~v~~v~~~~~~~--- 365 (502)
|++||+.+++++..+..|. .+.++.+.+ ..+++++.++.+++|+++......... .....+.++++.+...
T Consensus 153 i~vwd~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (368)
T 3mmy_A 153 LKFWDTRSSNPMMVLQLPE-RCYCADVIY---PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKP 228 (368)
T ss_dssp EEEECSSCSSCSEEEECSS-CEEEEEEET---TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCE
T ss_pred EEEEECCCCcEEEEEecCC-CceEEEecC---CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCC
Confidence 9999999999999888664 677777775 468889999999999998765432211 2334455565544322
Q ss_pred CEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCC------------CeeEEEEcCCCCCEEEEEeCCCcEEEEE
Q 010748 366 HSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDK------------AVCTISYNPLVPNLLATGSTDKMVKLWD 433 (502)
Q Consensus 366 ~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~------------~v~~l~~sp~~~~~l~t~s~dg~i~vwd 433 (502)
..+++++.+|.|++|+++.... ...+..+..|.. .|++++|+|++ .+|++++.||.|++||
T Consensus 229 ~~~~~~~~dg~i~i~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~s~~~dg~i~iwd 301 (368)
T 3mmy_A 229 TGFALGSIEGRVAIHYINPPNP------AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVH-GTLATVGSDGRFSFWD 301 (368)
T ss_dssp EEEEEEETTSEEEEEESSCSCH------HHHSEEEECSEEC----CCCEEECCEEEEEECTTT-CCEEEEETTSCEEEEE
T ss_pred CeEEEecCCCcEEEEecCCCCc------cccceeeeeeecccccccccccccceEEEEEecCC-CEEEEEccCCeEEEEE
Confidence 2399999999999999987621 145667777765 79999999998 8999999999999999
Q ss_pred CCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCC
Q 010748 434 LSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~ 482 (502)
+.+++ ++..+..|.++|.+++|+|++.+ |++|+.|+..+.|++...
T Consensus 302 ~~~~~--~~~~~~~~~~~v~~~~~s~~g~~-l~~~s~d~~~~~~~~~~~ 347 (368)
T 3mmy_A 302 KDART--KLKTSEQLDQPISACCFNHNGNI-FAYASSYDWSKGHEFYNP 347 (368)
T ss_dssp TTTTE--EEEECCCCSSCEEEEEECTTSSC-EEEEECCCSTTCGGGCCT
T ss_pred CCCCc--EEEEecCCCCCceEEEECCCCCe-EEEEecccccccccccCC
Confidence 99887 57778899999999999999995 888888876655554433
No 83
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=7.5e-32 Score=271.39 Aligned_cols=258 Identities=16% Similarity=0.269 Sum_probs=198.4
Q ss_pred cceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcc------
Q 010748 193 PLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHT------ 266 (502)
Q Consensus 193 ~~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~------ 266 (502)
..|++| +|+|++||+|+.||.|+||++.......+ ...........+.+|.
T Consensus 31 V~~v~~-------s~~g~~la~g~~dg~v~iw~~~~~~~~~~----------------~~~~~~~~~~~~~~h~~~~~~~ 87 (447)
T 3dw8_B 31 ISTVEF-------NHSGELLATGDKGGRVVIFQQEQENKIQS----------------HSRGEYNVYSTFQSHEPEFDYL 87 (447)
T ss_dssp EEEEEE-------CSSSSEEEEEETTSEEEEEEECC-----C----------------CCCCCEEEEEEEECCCCEEEGG
T ss_pred EEEEEE-------CCCCCEEEEEcCCCeEEEEEecCCCCCCc----------------ccccceeEeccccccccccccc
Confidence 367777 79999999999999999999976432110 0001122344556787
Q ss_pred ------cceeeEEeccCCC-cEEEEEecCCcEEEEeCCCCeee-------------------------------------
Q 010748 267 ------DSVLGLAWNKEFR-NILASASADKQVKIWDVAAGKCN------------------------------------- 302 (502)
Q Consensus 267 ------~~V~~l~~~~~~~-~~l~sgs~dg~v~vwd~~~~~~~------------------------------------- 302 (502)
..|++++|+|++. .+|++|+.|++|++|++.+++..
T Consensus 88 ~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (447)
T 3dw8_B 88 KSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEAS 167 (447)
T ss_dssp GTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEE
T ss_pred ccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeecc
Confidence 8899999999942 68999999999999999765432
Q ss_pred --Ee-eccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccc--------eEeecCCeeEEEeCCCCCCEEEEE
Q 010748 303 --LT-LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF--------KWAVAADVESLAWDPHAEHSFVVS 371 (502)
Q Consensus 303 --~~-~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~--------~~~~~~~v~~v~~~~~~~~~~~~~ 371 (502)
.. ..+|...|++++|+|++ .+|++| .|+.|++||+++...... ...|...|.+++|+|++..++++|
T Consensus 168 ~~~~~~~~h~~~v~~~~~~~~~-~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~ 245 (447)
T 3dw8_B 168 PRRIFANAHTYHINSISINSDY-ETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYS 245 (447)
T ss_dssp EEEEECSCCSSCCCEEEECTTS-SEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEE
T ss_pred ceEEeccCCCcceEEEEEcCCC-CEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEE
Confidence 12 36799999999999998 889998 799999999984332221 235778899999999875699999
Q ss_pred eCCCcEEEEECCCCCCCCCCCCCccceEEeccCC------------CeeEEEEcCCCCCEEEEEeCCCcEEEEECCC-CC
Q 010748 372 LEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDK------------AVCTISYNPLVPNLLATGSTDKMVKLWDLSN-NQ 438 (502)
Q Consensus 372 ~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~------------~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~-~~ 438 (502)
+.||.|++||+++.... ...+..+..|.. .|++++|+|++ .+|++++. +.|++||++. ++
T Consensus 246 ~~dg~i~iwd~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~-~~v~iwd~~~~~~ 318 (447)
T 3dw8_B 246 SSKGTIRLCDMRASALC-----DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSG-RYMMTRDY-LSVKVWDLNMENR 318 (447)
T ss_dssp ETTSCEEEEETTTCSSS-----CTTCEEECCC-----CCHHHHHTTCEEEEEECTTS-SEEEEEES-SEEEEEETTCCSS
T ss_pred eCCCeEEEEECcCCccc-----cceeeEeccCCCccccccccccCceEEEEEECCCC-CEEEEeeC-CeEEEEeCCCCcc
Confidence 99999999999987310 122567777775 89999999988 89999998 9999999987 55
Q ss_pred eeEEEEecCCCCc---------------EEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccc
Q 010748 439 PSCIASRNPKAGA---------------VFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGI 485 (502)
Q Consensus 439 ~~~~~~~~~~~~~---------------v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~ 485 (502)
++..+..|... ++.++|+|++.+ |++|+.||.|+|||+.+++.+
T Consensus 319 --~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~-l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 319 --PVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSV-VMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp --CSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSE-EEEECSTTEEEEEETTTCCEE
T ss_pred --ccceeeccccccccccccccccccccceEEEECCCCCE-EEEeccCCEEEEEEcCCCcce
Confidence 34444455321 345999999995 899999999999999998775
No 84
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=6.7e-31 Score=254.26 Aligned_cols=249 Identities=17% Similarity=0.253 Sum_probs=208.8
Q ss_pred ceeeeecCCCCCCCC-CCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeE
Q 010748 194 LCMAWLDCPLKDREK-GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL 272 (502)
Q Consensus 194 ~~~~~~~~~~~~s~~-~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 272 (502)
.|++| +|+ +++||+|+.|++|+|||+...+... ......+.+|...|.++
T Consensus 42 ~~v~~-------sp~~~~~l~S~s~D~~i~vWd~~~~~~~~----------------------~~~~~~l~~h~~~V~~~ 92 (340)
T 4aow_A 42 TQIAT-------TPQFPDMILSASRDKTIIMWKLTRDETNY----------------------GIPQRALRGHSHFVSDV 92 (340)
T ss_dssp EEEEE-------CTTCTTEEEEEETTSCEEEEEECCSSSCS----------------------EEEEEEECCCSSCEEEE
T ss_pred EEEEE-------eCCCCCEEEEEcCCCeEEEEECCCCCccc----------------------ceeeEEEeCCCCCEEEE
Confidence 68887 676 7899999999999999997543221 22233566899999999
Q ss_pred EeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCcc-ceEee
Q 010748 273 AWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG-FKWAV 351 (502)
Q Consensus 273 ~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~-~~~~~ 351 (502)
+|+|+ +.+|++|+.|+.|++|+............+...+..+.+++.+ .+|++++.|+.+++||+....... ....+
T Consensus 93 ~~s~d-g~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~ 170 (340)
T 4aow_A 93 VISSD-GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDN-RQIVSGSRDKTIKLWNTLGVCKYTVQDESH 170 (340)
T ss_dssp EECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEEEEECSSSC
T ss_pred EECCC-CCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecC-ccceeecCCCeEEEEEeCCCceEEEEeccc
Confidence 99999 5699999999999999999999988888889999999999998 889999999999999997654332 23356
Q ss_pred cCCeeEEEeCCCCC-CEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEE
Q 010748 352 AADVESLAWDPHAE-HSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVK 430 (502)
Q Consensus 352 ~~~v~~v~~~~~~~-~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~ 430 (502)
...+.+++|++++. .++++++.|+.|++||+++. ..+..+.+|...|++++|+|++ .+|++|+.||.|+
T Consensus 171 ~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~---------~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~Dg~i~ 240 (340)
T 4aow_A 171 SEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC---------KLKTNHIGHTGYLNTVTVSPDG-SLCASGGKDGQAM 240 (340)
T ss_dssp SSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTT---------EEEEEECCCSSCEEEEEECTTS-SEEEEEETTCEEE
T ss_pred cCcccceEEccCCCCcEEEEEcCCCEEEEEECCCC---------ceeeEecCCCCcEEEEEECCCC-CEEEEEeCCCeEE
Confidence 78899999988754 36788999999999999986 7788889999999999999998 8999999999999
Q ss_pred EEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010748 431 LWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 431 vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~ 488 (502)
+||+++.+ .+..+.. ...|.++.|+|++. +++++.|+.|+|||+.++..+...
T Consensus 241 iwd~~~~~--~~~~~~~-~~~v~~~~~~~~~~--~~~~~~d~~i~iwd~~~~~~~~~~ 293 (340)
T 4aow_A 241 LWDLNEGK--HLYTLDG-GDIINALCFSPNRY--WLCAATGPSIKIWDLEGKIIVDEL 293 (340)
T ss_dssp EEETTTTE--EEEEEEC-SSCEEEEEECSSSS--EEEEEETTEEEEEETTTTEEEEEE
T ss_pred EEEeccCc--eeeeecC-CceEEeeecCCCCc--eeeccCCCEEEEEECCCCeEEEec
Confidence 99999887 4444444 46799999999986 556778999999999987766543
No 85
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-30 Score=254.23 Aligned_cols=247 Identities=15% Similarity=0.270 Sum_probs=210.5
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEE
Q 010748 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.|++| +|++++|++|+.||.|+|||+.+... ...+.+|...|.+++
T Consensus 36 ~~~~~-------s~~~~~l~~~~~dg~i~vwd~~~~~~---------------------------~~~~~~h~~~v~~~~ 81 (369)
T 3zwl_B 36 TQVKY-------NKEGDLLFSCSKDSSASVWYSLNGER---------------------------LGTLDGHTGTIWSID 81 (369)
T ss_dssp EEEEE-------CTTSCEEEEEESSSCEEEEETTTCCE---------------------------EEEECCCSSCEEEEE
T ss_pred EEEEE-------cCCCCEEEEEeCCCEEEEEeCCCchh---------------------------hhhhhhcCCcEEEEE
Confidence 67777 78999999999999999999875322 234457999999999
Q ss_pred eccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCC-----CcEEEEecCCCCCccc-
Q 010748 274 WNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD-----RSVVMKDARISTHSGF- 347 (502)
Q Consensus 274 ~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~- 347 (502)
|+|+ +.+|++++.||.|++||+.+++++..+. |...|.+++|+|++ .+|++++.+ +.|++||++.......
T Consensus 82 ~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~-~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~ 158 (369)
T 3zwl_B 82 VDCF-TKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCG-NYFLAILDNVMKNPGSINIYEIERDSATHEL 158 (369)
T ss_dssp ECTT-SSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTS-SEEEEEECCBTTBCCEEEEEEEEECTTTCCE
T ss_pred EcCC-CCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCC-CEEEEecCCccCCCCEEEEEEecCCccceee
Confidence 9998 5699999999999999999999999888 88999999999999 899999998 9999999987654321
Q ss_pred ----------eEeecC--CeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCC
Q 010748 348 ----------KWAVAA--DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPL 415 (502)
Q Consensus 348 ----------~~~~~~--~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~ 415 (502)
...+.. .+.+++|+|++. ++++++.+|.|++||+++. ...+..+..|...|.+++|+|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~--------~~~~~~~~~~~~~v~~~~~~~~ 229 (369)
T 3zwl_B 159 TKVSEEPIHKIITHEGLDAATVAGWSTKGK-YIIAGHKDGKISKYDVSNN--------YEYVDSIDLHEKSISDMQFSPD 229 (369)
T ss_dssp EEECSSCSEEEECCTTCCCEEEEEECGGGC-EEEEEETTSEEEEEETTTT--------TEEEEEEECCSSCEEEEEECTT
T ss_pred cccccceeeeccCCcCccceeEEEEcCCCC-EEEEEcCCCEEEEEECCCC--------cEeEEEEecCCCceeEEEECCC
Confidence 223333 899999999765 8999999999999999984 3778888999999999999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCC--------------cEEEEECCC
Q 010748 416 VPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKG--------------KLEIWDTLS 481 (502)
Q Consensus 416 ~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg--------------~i~vwd~~~ 481 (502)
+ .+|++++.|+.|++||+.+++. +..+. +...+.+++|+|++++ +++++.++ .+++||+.+
T Consensus 230 ~-~~l~~~~~d~~i~v~d~~~~~~--~~~~~-~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 304 (369)
T 3zwl_B 230 L-TYFITSSRDTNSFLVDVSTLQV--LKKYE-TDCPLNTAVITPLKEF-IILGGGQEAKDVTTTSANEGKFEARFYHKIF 304 (369)
T ss_dssp S-SEEEEEETTSEEEEEETTTCCE--EEEEE-CSSCEEEEEECSSSSE-EEEEECCC-------------CEEEEEETTT
T ss_pred C-CEEEEecCCceEEEEECCCCce--eeeec-CCCCceeEEecCCCce-EEEeecCCCceEEEEecCCCcceeEEEecCC
Confidence 7 8999999999999999999874 33333 6688999999999995 77778777 899999999
Q ss_pred CccccccccC
Q 010748 482 DAGISNRFSK 491 (502)
Q Consensus 482 ~~~~~~~~~~ 491 (502)
++.+.....+
T Consensus 305 ~~~~~~~~~~ 314 (369)
T 3zwl_B 305 EEEIGRVQGH 314 (369)
T ss_dssp CCEEEEEECC
T ss_pred Ccchhheecc
Confidence 9887765544
No 86
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.2e-31 Score=268.97 Aligned_cols=267 Identities=20% Similarity=0.341 Sum_probs=207.0
Q ss_pred CCccccccccccCC-CceEEEEEecCCcceeEEEEEecCC--------CCCCCeeeeeccccCCCcceeeeecCCCCCCC
Q 010748 137 EDSEDLEDMTINPN-DAVIVCARNEDDVSHLEVYILEESD--------GGDPNLYVHHHIIIPAFPLCMAWLDCPLKDRE 207 (502)
Q Consensus 137 ~~~~~v~~~~~~p~-~~~l~~~~~~~~~~~l~v~~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~ 207 (502)
.|...|.+++|+|+ +++|++++.++ .+.||.+.... ......+..|. ..+.+++| +|
T Consensus 126 ~h~~~v~~l~~~p~~~~~lat~~~dg---~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~----~~v~~l~~-------~~ 191 (430)
T 2xyi_A 126 NHEGEVNRARYMPQNACVIATKTPSS---DVLVFDYTKHPSKPEPSGECQPDLRLRGHQ----KEGYGLSW-------NP 191 (430)
T ss_dssp EESSCCSEEEEETTEEEEEEEECSSS---CEEEEEGGGSCSSCCTTCCCCCSEEEECCS----SCCCCEEE-------CT
T ss_pred cCCCcEEEEEECCCCCcEEEEECCCC---cEEEEECCCcccccCccccCCCcEEecCCC----CCeEEEEe-------CC
Confidence 47789999999998 67888888776 46666665421 11111122232 23477888 67
Q ss_pred CCC-EEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEe
Q 010748 208 KGN-FMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS 286 (502)
Q Consensus 208 ~~~-~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs 286 (502)
++. +|++|+.||.|+||++........ .......+.+|...|.+++|+|.++.+|++|+
T Consensus 192 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~--------------------~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~ 251 (430)
T 2xyi_A 192 NLNGYLLSASDDHTICLWDINATPKEHR--------------------VIDAKNIFTGHTAVVEDVAWHLLHESLFGSVA 251 (430)
T ss_dssp TSTTEEEEECTTSCEEEEETTSCCBGGG--------------------EEECSEEECCCSSCEEEEEECSSCTTEEEEEE
T ss_pred CCCCeEEEEeCCCeEEEEeCCCCCCCCc--------------------eeccceeecCCCCCEeeeEEeCCCCCEEEEEe
Confidence 777 999999999999999975321110 01122345589999999999997688999999
Q ss_pred cCCcEEEEeCCCC---eeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCC-CccceEeecCCeeEEEeCC
Q 010748 287 ADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST-HSGFKWAVAADVESLAWDP 362 (502)
Q Consensus 287 ~dg~v~vwd~~~~---~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~-~~~~~~~~~~~v~~v~~~~ 362 (502)
.||.|++||++++ +++..+..|...|++++|+|++..+|++|+.||.|++||++... .......|...|.+++|+|
T Consensus 252 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp 331 (430)
T 2xyi_A 252 DDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 331 (430)
T ss_dssp TTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECS
T ss_pred CCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECC
Confidence 9999999999987 57778888999999999999996689999999999999999854 4444556889999999999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCCCCCC-----CCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCC
Q 010748 363 HAEHSFVVSLEDGTIKGFDIRTAKSDPD-----STSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNN 437 (502)
Q Consensus 363 ~~~~~~~~~~~dg~v~i~d~~~~~~~~~-----~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~ 437 (502)
++..++++++.||.|++||++....... ......+..+.+|...|++++|+|+++.+|++++.||.|+||++...
T Consensus 332 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 332 HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp SCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred CCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 9888899999999999999987421100 00014567778899999999999998559999999999999998753
No 87
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.1e-31 Score=262.89 Aligned_cols=253 Identities=17% Similarity=0.194 Sum_probs=200.2
Q ss_pred ceeeeecCCCCCCCCC-CEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeE
Q 010748 194 LCMAWLDCPLKDREKG-NFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL 272 (502)
Q Consensus 194 ~~~~~~~~~~~~s~~~-~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 272 (502)
.|++| +|++ ++||+|+.||.|+||++...... ......+|...|.++
T Consensus 77 ~~~~~-------~~~~~~~l~s~~~dg~i~iwd~~~~~~~-------------------------~~~~~~~h~~~v~~~ 124 (383)
T 3ei3_B 77 TSLEW-------HPTHPTTVAVGSKGGDIILWDYDVQNKT-------------------------SFIQGMGPGDAITGM 124 (383)
T ss_dssp EEEEE-------CSSCTTEEEEEEBTSCEEEEETTSTTCE-------------------------EEECCCSTTCBEEEE
T ss_pred EEEEE-------CCCCCCEEEEEcCCCeEEEEeCCCcccc-------------------------eeeecCCcCCceeEE
Confidence 67777 7888 99999999999999999753321 111234699999999
Q ss_pred EeccCCCcEEEEEecCCcEEEEeCCCCeeeEeecc---CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceE
Q 010748 273 AWNKEFRNILASASADKQVKIWDVAAGKCNLTLEH---HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW 349 (502)
Q Consensus 273 ~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~---h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 349 (502)
+|+|+++.+|++|+.|+.|++||+.+ ..+..+.. |...|.+++|+|++ .+|++|+.|+.|++||++ ........
T Consensus 125 ~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~-~~~~~~~~ 201 (383)
T 3ei3_B 125 KFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSR-QMLATGDSTGRLLLLGLD-GHEIFKEK 201 (383)
T ss_dssp EEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTT-TEEEEEETTSEEEEEETT-SCEEEEEE
T ss_pred EeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCC-CEEEEECCCCCEEEEECC-CCEEEEec
Confidence 99995477999999999999999986 45555543 44889999999999 899999999999999995 44444456
Q ss_pred eecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcC-CCCCEEEEEeCCCc
Q 010748 350 AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNP-LVPNLLATGSTDKM 428 (502)
Q Consensus 350 ~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp-~~~~~l~t~s~dg~ 428 (502)
.|...|.+++|+|++..++++++.||.|++||+++.... ...+..+ .|...|++++|+| ++ .+|++++.|+.
T Consensus 202 ~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~-----~~~~~~~-~~~~~v~~~~~s~~~~-~~l~~~~~d~~ 274 (383)
T 3ei3_B 202 LHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDK-----NSYIAEM-PHEKPVNAAYFNPTDS-TKLLTTDQRNE 274 (383)
T ss_dssp CSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCST-----TCEEEEE-ECSSCEEEEEECTTTS-CEEEEEESSSE
T ss_pred cCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcc-----cceEEEe-cCCCceEEEEEcCCCC-CEEEEEcCCCc
Confidence 788999999999988778999999999999999974210 1333444 7999999999999 87 99999999999
Q ss_pred EEEEECCCCCeeEEEEec-----CC----------CCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccccC
Q 010748 429 VKLWDLSNNQPSCIASRN-----PK----------AGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSK 491 (502)
Q Consensus 429 i~vwd~~~~~~~~~~~~~-----~~----------~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~~~ 491 (502)
|++||+++++........ .| .+.+..++|+|++.+ +|+.||.|+|||+.+++.+.....+
T Consensus 275 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~---s~s~d~~i~iwd~~~~~~~~~l~~~ 349 (383)
T 3ei3_B 275 IRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL---LLNDKRTIDIYDANSGGLVHQLRDP 349 (383)
T ss_dssp EEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT---CTTCCCCEEEEETTTCCEEEEECBT
T ss_pred EEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc---ccCCCCeEEEEecCCCceeeeecCC
Confidence 999999987643222211 11 244556777777763 7789999999999999988776543
No 88
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.2e-31 Score=287.29 Aligned_cols=250 Identities=19% Similarity=0.300 Sum_probs=216.2
Q ss_pred cceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeE
Q 010748 193 PLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL 272 (502)
Q Consensus 193 ~~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 272 (502)
..|++| +|++++||+|+.+|.|+|||+.++.. ...+.+|...|+++
T Consensus 16 v~~i~~-------sp~~~~la~~~~~g~v~iwd~~~~~~---------------------------~~~~~~~~~~v~~~ 61 (814)
T 3mkq_A 16 VKGIDF-------HPTEPWVLTTLYSGRVEIWNYETQVE---------------------------VRSIQVTETPVRAG 61 (814)
T ss_dssp EEEEEE-------CSSSSEEEEEETTSEEEEEETTTTEE---------------------------EEEEECCSSCEEEE
T ss_pred eEEEEE-------CCCCCEEEEEeCCCEEEEEECCCCce---------------------------EEEEecCCCcEEEE
Confidence 368888 89999999999999999999975322 22344799999999
Q ss_pred EeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCC-CCccceEee
Q 010748 273 AWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS-THSGFKWAV 351 (502)
Q Consensus 273 ~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~~ 351 (502)
+|+|+ +.+|++|+.||.|++||+.+++.+..+.+|...|++++|+|++ .+|++++.||.|++|++++. ........+
T Consensus 62 ~~s~~-~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~ 139 (814)
T 3mkq_A 62 KFIAR-KNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWALEQTFEGH 139 (814)
T ss_dssp EEEGG-GTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSEEEEEEGGGTSEEEEEEECC
T ss_pred EEeCC-CCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCC-CEEEEEcCCCEEEEEECCCCceEEEEEcCC
Confidence 99999 5699999999999999999999999999999999999999999 88999999999999999886 334445568
Q ss_pred cCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEecc-CCCeeEEEEcC--CCCCEEEEEeCCCc
Q 010748 352 AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH-DKAVCTISYNP--LVPNLLATGSTDKM 428 (502)
Q Consensus 352 ~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~sp--~~~~~l~t~s~dg~ 428 (502)
...|.+++|+|.+...+++++.+|.|++||+++. .....+..+ ...+.+++|+| ++ .+|++++.||.
T Consensus 140 ~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~ 209 (814)
T 3mkq_A 140 EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS---------TPNFTLTTGQERGVNYVDYYPLPDK-PYMITASDDLT 209 (814)
T ss_dssp SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCS---------SCSEEEECCCTTCCCEEEECCSTTC-CEEEEECTTSE
T ss_pred CCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---------cceeEEecCCCCCEEEEEEEECCCC-CEEEEEeCCCE
Confidence 8899999999944558999999999999999876 445555554 48999999999 76 89999999999
Q ss_pred EEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccccC
Q 010748 429 VKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSK 491 (502)
Q Consensus 429 i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~~~ 491 (502)
|++||+.+++ .+..+..|.+.|.+++|+|+++ +|++++.||.|++||+.++..+.....+
T Consensus 210 i~~~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~~ 269 (814)
T 3mkq_A 210 IKIWDYQTKS--CVATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSSTYKVEKTLNVG 269 (814)
T ss_dssp EEEEETTTTE--EEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCSEEEEECCS
T ss_pred EEEEECCCCc--EEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCcEEEEeecC
Confidence 9999999887 5677778999999999999999 5999999999999999998877655433
No 89
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-31 Score=291.60 Aligned_cols=307 Identities=14% Similarity=0.162 Sum_probs=211.8
Q ss_pred CccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC
Q 010748 138 DSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM 217 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~ 217 (502)
|...|.+++|+| +++|++++.++ .++||.+.... .+..+. .+....+++| +|++++|++|+.
T Consensus 57 ~~~~V~~l~fsp-g~~L~S~s~D~---~v~lWd~~~~~----~~~~~~---~~~~V~~v~~-------sp~g~~l~sgs~ 118 (902)
T 2oaj_A 57 DRSAIKEMRFVK-GIYLVVINAKD---TVYVLSLYSQK----VLTTVF---VPGKITSIDT-------DASLDWMLIGLQ 118 (902)
T ss_dssp SCCCEEEEEEET-TTEEEEEETTC---EEEEEETTTCS----EEEEEE---CSSCEEEEEC-------CTTCSEEEEEET
T ss_pred CCCCEEEEEEcC-CCEEEEEECcC---eEEEEECCCCc----EEEEEc---CCCCEEEEEE-------CCCCCEEEEEcC
Confidence 567899999999 88999998876 55666554432 222111 2233466666 899999999999
Q ss_pred CCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCccccc-ccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeC
Q 010748 218 EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIK-YKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV 296 (502)
Q Consensus 218 dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~ 296 (502)
||.|++||+...... +..+ . ..... ..+.+|...|++++|+|++..+|++|+.||+| +||+
T Consensus 119 dg~V~lwd~~~~~~~-~~~i-~---------------~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~ 180 (902)
T 2oaj_A 119 NGSMIVYDIDRDQLS-SFKL-D---------------NLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSL 180 (902)
T ss_dssp TSCEEEEETTTTEEE-EEEE-C---------------CHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEET
T ss_pred CCcEEEEECCCCccc-ccee-c---------------cccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEEC
Confidence 999999999864321 1000 0 00000 23468999999999999756799999999999 9999
Q ss_pred CCCeeeEeeccC------------------CCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccce-E--------
Q 010748 297 AAGKCNLTLEHH------------------TDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK-W-------- 349 (502)
Q Consensus 297 ~~~~~~~~~~~h------------------~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~-------- 349 (502)
.+++++..+..| ...|++++|+|++ .+|++|+.||+|++||+++++..... .
T Consensus 181 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg-~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~ 259 (902)
T 2oaj_A 181 VENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNS-LHIITIHEDNSLVFWDANSGHMIMARTVFETEINVP 259 (902)
T ss_dssp TTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTS-SEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSC
T ss_pred CCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCC-CEEEEEECCCeEEEEECCCCcEEEEEeecccccCCC
Confidence 999998888765 5789999999998 89999999999999999886643210 0
Q ss_pred ---------eecCCeeEEEeC----CCCCCEEEEEeCC-----CcEEEEE------------------------------
Q 010748 350 ---------AVAADVESLAWD----PHAEHSFVVSLED-----GTIKGFD------------------------------ 381 (502)
Q Consensus 350 ---------~~~~~v~~v~~~----~~~~~~~~~~~~d-----g~v~i~d------------------------------ 381 (502)
.+...|.+++|+ |++..++++|+.+ +.+.+|+
T Consensus 260 ~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 339 (902)
T 2oaj_A 260 QPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPL 339 (902)
T ss_dssp CTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECC
T ss_pred CCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEec
Confidence 123357888884 3333345555433 2455554
Q ss_pred -----------------------------------------CCCCCCCCCC--------CC-------------------
Q 010748 382 -----------------------------------------IRTAKSDPDS--------TS------------------- 393 (502)
Q Consensus 382 -----------------------------------------~~~~~~~~~~--------~~------------------- 393 (502)
+.++...... ..
T Consensus 340 ~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~ 419 (902)
T 2oaj_A 340 PTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLG 419 (902)
T ss_dssp SSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHH
T ss_pred CCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHH
Confidence 3222100000 00
Q ss_pred -----CccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCee--EEEE--ec-----CCCCcEEEEEEcC
Q 010748 394 -----QQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS--CIAS--RN-----PKAGAVFSVAFSE 459 (502)
Q Consensus 394 -----~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~--~~~~--~~-----~~~~~v~~~~~sp 459 (502)
......+.+|...+.+++|+|++ ++|++|+.|++|++||+.++... .... +. +|...|++++|+|
T Consensus 420 ~~~~~~~~~~~l~G~~~~v~sv~~spdg-~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafsp 498 (902)
T 2oaj_A 420 ALSAAQNKDYLLKGGVRTKRQKLPAEYG-TAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAA 498 (902)
T ss_dssp HHHTTBCCCCSCCCSBCCCCCCCCCSEE-EEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEET
T ss_pred HHhcccCCCCcccCCcCCCCcccccccC-cEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecC
Confidence 00000123344445556677877 89999999999999999876421 1111 11 7888999999999
Q ss_pred CCCcEEEEEeCCCcEEEEECCCCc
Q 010748 460 DSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 460 d~~~ll~sg~~dg~i~vwd~~~~~ 483 (502)
+++ +||+|+.||+|+||++.+++
T Consensus 499 dg~-~LAsgs~DgtV~lwd~~~~~ 521 (902)
T 2oaj_A 499 ETL-ELAVSIETGDVVLFKYEVNQ 521 (902)
T ss_dssp TTT-EEEEEETTSCEEEEEEEECC
T ss_pred CCC-eEEEEecCcEEEEEEecCcc
Confidence 999 59999999999999998774
No 90
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.1e-31 Score=257.01 Aligned_cols=248 Identities=13% Similarity=0.143 Sum_probs=205.0
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEE
Q 010748 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.|++| +|++++|++|+.||.|+||++...... .......+|...|++++
T Consensus 15 ~~~~~-------s~~~~~l~~~~~d~~v~iw~~~~~~~~------------------------~~~~~~~~~~~~v~~~~ 63 (342)
T 1yfq_A 15 SDIKI-------IPSKSLLLITSWDGSLTVYKFDIQAKN------------------------VDLLQSLRYKHPLLCCN 63 (342)
T ss_dssp EEEEE-------EGGGTEEEEEETTSEEEEEEEETTTTE------------------------EEEEEEEECSSCEEEEE
T ss_pred EEEEE-------cCCCCEEEEEcCCCeEEEEEeCCCCcc------------------------ccceeeeecCCceEEEE
Confidence 67877 688999999999999999999753211 11122337999999999
Q ss_pred eccCCCc-EEEEEecCCcEEEEeC-CCCeeeEeecc--CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCC--------
Q 010748 274 WNKEFRN-ILASASADKQVKIWDV-AAGKCNLTLEH--HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI-------- 341 (502)
Q Consensus 274 ~~~~~~~-~l~sgs~dg~v~vwd~-~~~~~~~~~~~--h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~-------- 341 (502)
|+|+ +. +|++|+.||.|++||+ .+++. ..+.+ |...|.+++|+| + .+|++++.|+.|++||+++
T Consensus 64 ~~~~-~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~-~~l~s~~~d~~i~iwd~~~~~~~~~~~ 139 (342)
T 1yfq_A 64 FIDN-TDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-D-DKLIAASWDGLIEVIDPRNYGDGVIAV 139 (342)
T ss_dssp EEES-SSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-T-TEEEEEETTSEEEEECHHHHTTBCEEE
T ss_pred ECCC-CCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-C-CEEEEEcCCCeEEEEcccccccccccc
Confidence 9999 77 8999999999999999 77755 67788 999999999999 6 8999999999999999987
Q ss_pred -CCCccceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCC-CCCCCCCCCCccceEEeccCCCeeEEEEcC-CCCC
Q 010748 342 -STHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT-AKSDPDSTSQQSSFTLHAHDKAVCTISYNP-LVPN 418 (502)
Q Consensus 342 -~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~-~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp-~~~~ 418 (502)
.+... ...+...+.+++|+|++ +++++.+|.|++||+++ ... ........|...|.+++|+| ++ .
T Consensus 140 ~~~~~~-~~~~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~-------~~~~~~~~~~~~i~~i~~~~~~~-~ 207 (342)
T 1yfq_A 140 KNLNSN-NTKVKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDD-------NGTIEESGLKYQIRDVALLPKEQ-E 207 (342)
T ss_dssp EESCSS-SSSSCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTC-------CCEEEECSCSSCEEEEEECSGGG-C
T ss_pred cCCeee-EEeeCCceEEEEecCCc---EEEEeCCCeEEEEECCccccc-------cceeeecCCCCceeEEEECCCCC-C
Confidence 55444 23478899999999854 89999999999999997 521 23445567889999999999 87 8
Q ss_pred EEEEEeCCCcEEEEECCCC------CeeEEEEecCCC---------CcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010748 419 LLATGSTDKMVKLWDLSNN------QPSCIASRNPKA---------GAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 419 ~l~t~s~dg~i~vwd~~~~------~~~~~~~~~~~~---------~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~ 483 (502)
+|++++.||.|++|++... + ....+..|. +.|.+++|+|++.+ |++|+.||.|++||+.+++
T Consensus 208 ~l~~~~~dg~i~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~-l~~~~~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 208 GYACSSIDGRVAVEFFDDQGDDYNSS--KRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKF-LYTAGSDGIISCWNLQTRK 284 (342)
T ss_dssp EEEEEETTSEEEEEECCTTCCSTTCT--TCEEEECCCCCTTCCSSCCCEEEEEECTTTCC-EEEEETTSCEEEEETTTTE
T ss_pred EEEEEecCCcEEEEEEcCCCcccccc--cceeeecccccccccccceeEEEEEEcCCCCE-EEEecCCceEEEEcCccHh
Confidence 9999999999999999876 4 344455554 49999999999995 8899999999999999998
Q ss_pred cccccccC
Q 010748 484 GISNRFSK 491 (502)
Q Consensus 484 ~~~~~~~~ 491 (502)
.+.....+
T Consensus 285 ~~~~~~~~ 292 (342)
T 1yfq_A 285 KIKNFAKF 292 (342)
T ss_dssp EEEECCCC
T ss_pred Hhhhhhcc
Confidence 87765544
No 91
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-32 Score=274.13 Aligned_cols=255 Identities=14% Similarity=0.145 Sum_probs=199.8
Q ss_pred cceeeeecCCCCCCC-CCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceee
Q 010748 193 PLCMAWLDCPLKDRE-KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLG 271 (502)
Q Consensus 193 ~~~~~~~~~~~~~s~-~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 271 (502)
..|++| +| ++++||+|+.||.|+|||+...... ...... ...+|...|++
T Consensus 66 V~~~~~-------s~~~~~~l~s~s~dg~v~vwd~~~~~~~---------------------~~~~~~-~~~~h~~~v~~ 116 (437)
T 3gre_A 66 ITSSAV-------SPGETPYLITGSDQGVIKIWNLKEIIVG---------------------EVYSSS-LTYDCSSTVTQ 116 (437)
T ss_dssp EEEEEE-------ECSSSCEEEEEETTSEEEEEEHHHHHTT---------------------CCCSCS-EEEECSSCEEE
T ss_pred eEEEEE-------CCCCCCEEEEecCCceEEEeECcccccC---------------------ccccee-eeccCCCCEEE
Confidence 378887 68 8999999999999999998641100 001011 11158999999
Q ss_pred EEeccCCCcEEEEEecCCcEEEEeCC---CCeeeEeecc------------CCCCeEEEE--EcCCCCcEEEEEeCCCcE
Q 010748 272 LAWNKEFRNILASASADKQVKIWDVA---AGKCNLTLEH------------HTDKVQAVA--WNHHSPQILLSGSFDRSV 334 (502)
Q Consensus 272 l~~~~~~~~~l~sgs~dg~v~vwd~~---~~~~~~~~~~------------h~~~v~~l~--~~~~~~~~l~s~s~dg~i 334 (502)
++|+|+ +.+|++|+.||+|++||+. +++.+..+.. +...+.++. +++++ .+|++|+.||.|
T Consensus 117 ~~~~~~-~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i 194 (437)
T 3gre_A 117 ITMIPN-FDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEK-SLLVALTNLSRV 194 (437)
T ss_dssp EEECTT-SSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSC-EEEEEEETTSEE
T ss_pred EEEeCC-CCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCC-CEEEEEeCCCeE
Confidence 999998 6699999999999999994 5544443332 455666666 55677 899999999999
Q ss_pred EEEecCCCCCccceEe--ecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEe-ccCCCeeEEE
Q 010748 335 VMKDARISTHSGFKWA--VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH-AHDKAVCTIS 411 (502)
Q Consensus 335 ~iwd~~~~~~~~~~~~--~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~ 411 (502)
++||+++.+....... |...|.+++|+|++. ++++|+.||.|++||+++. .++..+. .|..+|++++
T Consensus 195 ~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~---------~~~~~~~~~~~~~v~~~~ 264 (437)
T 3gre_A 195 IIFDIRTLERLQIIENSPRHGAVSSICIDEECC-VLILGTTRGIIDIWDIRFN---------VLIRSWSFGDHAPITHVE 264 (437)
T ss_dssp EEEETTTCCEEEEEECCGGGCCEEEEEECTTSC-EEEEEETTSCEEEEETTTT---------EEEEEEBCTTCEEEEEEE
T ss_pred EEEeCCCCeeeEEEccCCCCCceEEEEECCCCC-EEEEEcCCCeEEEEEcCCc---------cEEEEEecCCCCceEEEE
Confidence 9999999887765555 788999999999854 8999999999999999986 6667765 7888999997
Q ss_pred EcC----CCCCEEEEEeCCCcEEEEECCCCCeeEEEEe----------------------cC--CCCcEEEEEEcCCCCc
Q 010748 412 YNP----LVPNLLATGSTDKMVKLWDLSNNQPSCIASR----------------------NP--KAGAVFSVAFSEDSPF 463 (502)
Q Consensus 412 ~sp----~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~----------------------~~--~~~~v~~~~~spd~~~ 463 (502)
|+| ++ .+|++|+.||.|++||+.+++....... .+ |...|++++|+ ++.
T Consensus 265 ~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~- 341 (437)
T 3gre_A 265 VCQFYGKNS-VIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK- 341 (437)
T ss_dssp ECTTTCTTE-EEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE-
T ss_pred eccccCCCc-cEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce-
Confidence 765 34 6999999999999999998874332221 11 66678999999 666
Q ss_pred EEEEEeCCCcEEEEECCCCccccccccC
Q 010748 464 VLAIGGSKGKLEIWDTLSDAGISNRFSK 491 (502)
Q Consensus 464 ll~sg~~dg~i~vwd~~~~~~~~~~~~~ 491 (502)
+|++|+.||.|++||+.+++.+....++
T Consensus 342 ~l~s~~~d~~i~~wd~~~~~~~~~~~~~ 369 (437)
T 3gre_A 342 ILLTDEATSSIVMFSLNELSSSKAVISP 369 (437)
T ss_dssp EEEEEGGGTEEEEEETTCGGGCEEEECC
T ss_pred EEEecCCCCeEEEEECCCcccceEEecc
Confidence 5999999999999999999988766654
No 92
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=2.1e-31 Score=263.89 Aligned_cols=249 Identities=10% Similarity=0.112 Sum_probs=179.6
Q ss_pred CCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEecc--------C
Q 010748 206 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNK--------E 277 (502)
Q Consensus 206 s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~--------~ 277 (502)
++++++||+|+.|++|+|||+....... ......+.+|.+.|++|+|+| +
T Consensus 98 ~~~~~~las~~~d~~v~lw~~~~~~~~~----------------------~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d 155 (393)
T 4gq1_A 98 PVYSLFLACVCQDNTVRLIITKNETIIT----------------------QHVLGGKSGHHNFVNDIDIADVYSADNRLA 155 (393)
T ss_dssp CEEEEEEEEEETTSCEEEEEEETTEEEE----------------------EEEECTTTSCSSCEEEEEEEEEECTTCSEE
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCccce----------------------eeeecccCCCCCceEEEEEccccccccCCC
Confidence 5678899999999999999987543221 122335678999999999998 4
Q ss_pred CCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccc----------
Q 010748 278 FRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF---------- 347 (502)
Q Consensus 278 ~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~---------- 347 (502)
+++|||||.|++|+|||+.++.++..+..|...|.+++|+|++..+|++|+.||+|++||+++++....
T Consensus 156 -~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~ 234 (393)
T 4gq1_A 156 -EQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNP 234 (393)
T ss_dssp -EEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCC
T ss_pred -CCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccc
Confidence 579999999999999999999888888889999999999999867899999999999999987653221
Q ss_pred ---------------eEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCC----------CCCccceEEec
Q 010748 348 ---------------KWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDS----------TSQQSSFTLHA 402 (502)
Q Consensus 348 ---------------~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~----------~~~~~~~~~~~ 402 (502)
...+...+.++.|.+.....+++++.|+.+++||+......... ...........
T Consensus 235 ~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 314 (393)
T 4gq1_A 235 WLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISL 314 (393)
T ss_dssp CSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECS
T ss_pred eEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccc
Confidence 12345678889987433458999999999999999876321100 00011112222
Q ss_pred cCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010748 403 HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 403 h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~ 481 (502)
+...+..+.+.+.+..++++|+.||.|++||+.+++. ......|..+|++++|+|+|+ +||+++.+| +.+|.+..
T Consensus 315 ~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~--~~~~~~~~~~V~svafspdG~-~LA~as~~G-v~lvrL~g 389 (393)
T 4gq1_A 315 FPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDS--NSIPIQLGMPIVDFCWHQDGS-HLAIATEGS-VLLTRLMG 389 (393)
T ss_dssp SCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTC--CEEEEECSSCEEEEEECTTSS-EEEEEESSE-EEEEEEGG
T ss_pred cCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcE--EEEecCCCCcEEEEEEcCCCC-EEEEEeCCC-eEEEEEeC
Confidence 2233333333333435677788899999999998874 444556778999999999999 488887665 77776643
No 93
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.5e-30 Score=262.22 Aligned_cols=277 Identities=24% Similarity=0.346 Sum_probs=223.5
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010748 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~ 216 (502)
.|...|.++.|+ +++|++|+.++ .+.+|.+..... ...+..|. ....|+.| ++++|++|+
T Consensus 157 ~h~~~v~~~~~~--~~~l~s~~~dg---~i~vwd~~~~~~--~~~~~~h~----~~v~~~~~---------~~~~l~s~s 216 (445)
T 2ovr_B 157 GHTGGVWSSQMR--DNIIISGSTDR---TLKVWNAETGEC--IHTLYGHT----STVRCMHL---------HEKRVVSGS 216 (445)
T ss_dssp CCSSCEEEEEEE--TTEEEEEETTS---CEEEEETTTTEE--EEEECCCS----SCEEEEEE---------ETTEEEEEE
T ss_pred CCCCCEEEEEec--CCEEEEEeCCC---eEEEEECCcCcE--EEEECCCC----CcEEEEEe---------cCCEEEEEe
Confidence 578899999997 67999999887 456665543321 11111222 22356655 477899999
Q ss_pred CCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeC
Q 010748 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV 296 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~ 296 (502)
.||.|++||+.++.. ...+.+|...|.+++| + +.+|++|+.||.|++||+
T Consensus 217 ~dg~i~~wd~~~~~~---------------------------~~~~~~~~~~v~~~~~--~-~~~l~~~~~dg~i~iwd~ 266 (445)
T 2ovr_B 217 RDATLRVWDIETGQC---------------------------LHVLMGHVAAVRCVQY--D-GRRVVSGAYDFMVKVWDP 266 (445)
T ss_dssp TTSEEEEEESSSCCE---------------------------EEEEECCSSCEEEEEE--C-SSCEEEEETTSCEEEEEG
T ss_pred CCCEEEEEECCCCcE---------------------------EEEEcCCcccEEEEEE--C-CCEEEEEcCCCEEEEEEC
Confidence 999999999975332 2234579999999999 3 458999999999999999
Q ss_pred CCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEEEEEeCCCc
Q 010748 297 AAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGT 376 (502)
Q Consensus 297 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~ 376 (502)
.+++++..+.+|...|.++.| ++ .++++|+.||.|++||+++++.......+...+.++.+++ .++++|+.||.
T Consensus 267 ~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~ 340 (445)
T 2ovr_B 267 ETETCLHTLQGHTNRVYSLQF--DG-IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD---NILVSGNADST 340 (445)
T ss_dssp GGTEEEEEECCCSSCEEEEEE--CS-SEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEET---TEEEEEETTSC
T ss_pred CCCcEeEEecCCCCceEEEEE--CC-CEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeC---CEEEEEeCCCe
Confidence 999999999999999999999 44 7899999999999999999887766667788899888864 38999999999
Q ss_pred EEEEECCCCCCCCCCCCCccceEEec---cCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEe---cCCCC
Q 010748 377 IKGFDIRTAKSDPDSTSQQSSFTLHA---HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASR---NPKAG 450 (502)
Q Consensus 377 v~i~d~~~~~~~~~~~~~~~~~~~~~---h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~---~~~~~ 450 (502)
|++||++++ ..+..+.. |...|++++|++ .+|++|+.||.|++||+.+++....... ..|.+
T Consensus 341 i~vwd~~~~---------~~~~~~~~~~~~~~~v~~~~~~~---~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 408 (445)
T 2ovr_B 341 VKIWDIKTG---------QCLQTLQGPNKHQSAVTCLQFNK---NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGG 408 (445)
T ss_dssp EEEEETTTC---------CEEEEECSTTSCSSCEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTC
T ss_pred EEEEECCCC---------cEEEEEccCCCCCCCEEEEEECC---CEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCc
Confidence 999999886 66777765 889999999973 7999999999999999999884332211 46788
Q ss_pred cEEEEEEcCCCCcEEEEEeCCCc----EEEEECCCC
Q 010748 451 AVFSVAFSEDSPFVLAIGGSKGK----LEIWDTLSD 482 (502)
Q Consensus 451 ~v~~~~~spd~~~ll~sg~~dg~----i~vwd~~~~ 482 (502)
.|++++|+|++. +|++|+.||+ |.|||+...
T Consensus 409 ~v~~~~~s~~~~-~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 409 VVWRIRASNTKL-VCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEEEEEECSSEE-EEEEECSSSSSCCEEEEEECCCC
T ss_pred eEEEEEecCCEE-EEEEcccCCCCccEEEEEECCCC
Confidence 999999999998 5999999998 999999764
No 94
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.5e-31 Score=301.23 Aligned_cols=301 Identities=21% Similarity=0.273 Sum_probs=239.8
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCC-------------------------Ce--eeee---
Q 010748 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDP-------------------------NL--YVHH--- 185 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~-------------------------~l--~~~~--- 185 (502)
..|...|.++.|+|++++|++++.++ .+.+|.......... .+ ...+
T Consensus 879 ~~h~~~v~~v~~spdg~~l~s~s~dg---~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 955 (1249)
T 3sfz_A 879 RGHLSWVHGVMFSPDGSSFLTASDDQ---TIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQ 955 (1249)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTS---CEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCC
T ss_pred CCCccceEEEEECCCCCEEEEEeCCC---eEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcce
Confidence 35788999999999999999999887 567776442111000 00 0000
Q ss_pred -ccccCCCcceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccC
Q 010748 186 -HIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGS 264 (502)
Q Consensus 186 -~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (502)
.........|++| +|+++++++|+.+|.|++|++.++.. ...+.+
T Consensus 956 ~~~~~~~~i~~~~~-------sp~g~~l~~g~~~g~i~i~d~~~~~~---------------------------~~~~~~ 1001 (1249)
T 3sfz_A 956 IDYLPEAQVSCCCL-------SPHLEYVAFGDEDGAIKIIELPNNRV---------------------------FSSGVG 1001 (1249)
T ss_dssp EEEECCSCEEEEEE-------CTTSSEEEEEETTSCCEEEETTTTSC---------------------------EEECCC
T ss_pred EEEcccCcEEEEEE-------cCCCCEEEEEcCCCCEEEEEcCCCce---------------------------eeeccc
Confidence 0001122344444 89999999999999999999975332 223457
Q ss_pred cccceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCC
Q 010748 265 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH 344 (502)
Q Consensus 265 h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~ 344 (502)
|...|++++|+|+ +.+|++|+.||+|++||+.+++... +..|...|.++.|+|++ .+++++.||.|++||+.+++.
T Consensus 1002 h~~~v~~l~~s~d-g~~l~s~~~dg~i~vwd~~~~~~~~-~~~~~~~v~~~~~~~~~--~l~~~~~dg~v~vwd~~~~~~ 1077 (1249)
T 3sfz_A 1002 HKKAVRHIQFTAD-GKTLISSSEDSVIQVWNWQTGDYVF-LQAHQETVKDFRLLQDS--RLLSWSFDGTVKVWNVITGRI 1077 (1249)
T ss_dssp CSSCCCCEEECSS-SSCEEEECSSSBEEEEETTTTEEEC-CBCCSSCEEEEEECSSS--EEEEEESSSEEEEEETTTTCC
T ss_pred CCCceEEEEECCC-CCEEEEEcCCCEEEEEECCCCceEE-EecCCCcEEEEEEcCCC--cEEEEECCCcEEEEECCCCce
Confidence 9999999999999 5699999999999999999998764 55799999999999965 688999999999999999988
Q ss_pred ccceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEe
Q 010748 345 SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS 424 (502)
Q Consensus 345 ~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s 424 (502)
......+...|.+++|+|++. ++++++.||.|++||+.+. .++..+.+|...|++++|+|++ .+|++|+
T Consensus 1078 ~~~~~~~~~~v~~~~~s~d~~-~l~s~s~d~~v~iwd~~~~---------~~~~~l~~h~~~v~~~~~s~dg-~~lat~~ 1146 (1249)
T 3sfz_A 1078 ERDFTCHQGTVLSCAISSDAT-KFSSTSADKTAKIWSFDLL---------SPLHELKGHNGCVRCSAFSLDG-ILLATGD 1146 (1249)
T ss_dssp CEEEECCSSCCCCEEECSSSS-SCEEECCSSCCCEECSSSS---------SCSBCCCCCSSCEEEEEECSSS-SEEEEEE
T ss_pred eEEEcccCCcEEEEEECCCCC-EEEEEcCCCcEEEEECCCc---------ceeeeeccCCCcEEEEEECCCC-CEEEEEe
Confidence 877778899999999999876 7899999999999999886 6677788999999999999998 9999999
Q ss_pred CCCcEEEEECCCCCeeEE-------EEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccccC
Q 010748 425 TDKMVKLWDLSNNQPSCI-------ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSK 491 (502)
Q Consensus 425 ~dg~i~vwd~~~~~~~~~-------~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~~~ 491 (502)
.||.|++||+.+++.... .....|.+.|++++|+|++.+ |++++ |.|++||+.++..+.....+
T Consensus 1147 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~-l~s~~--g~v~vwd~~~g~~~~~~~~~ 1217 (1249)
T 3sfz_A 1147 DNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKT-LVSAG--GYLKWWNVATGDSSQTFYTN 1217 (1249)
T ss_dssp TTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSC-EEEES--SSEEEBCSSSCBCCCCCCCS
T ss_pred CCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCE-EEECC--CeEEEEECCCCceeeeeecc
Confidence 999999999998763221 112568899999999999996 66665 89999999999988766544
No 95
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.5e-31 Score=261.42 Aligned_cols=261 Identities=15% Similarity=0.212 Sum_probs=205.2
Q ss_pred ceeeeecCCCCCCC-CCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeE
Q 010748 194 LCMAWLDCPLKDRE-KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL 272 (502)
Q Consensus 194 ~~~~~~~~~~~~s~-~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 272 (502)
.|++|.+. ++ ...++++++.++.|+||++.+...+.... ......|...|+++
T Consensus 22 ~~i~~~p~----~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~----------------------~~~~~~~~~~v~~~ 75 (366)
T 3k26_A 22 FGVQFNWH----SKEGDPLVFATVGSNRVTLYECHSQGEIRLLQ----------------------SYVDADADENFYTC 75 (366)
T ss_dssp EEEEECTT----CCTTSCEEEEEEETTEEEEEEECGGGCEEEEE----------------------EEECSCTTCCEEEE
T ss_pred EEEEEecc----cCCCCceEEEECCCCEEEEEEcCCCcEEEeee----------------------eccccCCCCcEEEE
Confidence 67777321 11 35566666677899999997544322111 11112477899999
Q ss_pred EeccCC---CcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcC-CCCcEEEEEeCCCcEEEEecCCCCCccce
Q 010748 273 AWNKEF---RNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNH-HSPQILLSGSFDRSVVMKDARISTHSGFK 348 (502)
Q Consensus 273 ~~~~~~---~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~-~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 348 (502)
+|+|++ +.+|++|+.||.|++||+.+++++..+.+|...|.+++|+| ++ .+|++|+.||.|++||+++.+.....
T Consensus 76 ~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~ 154 (366)
T 3k26_A 76 AWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP-NLLLSVSKDHALRLWNIQTDTLVAIF 154 (366)
T ss_dssp EEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCT-TEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCC-CEEEEEeCCCeEEEEEeecCeEEEEe
Confidence 999984 34899999999999999999999999999999999999999 55 89999999999999999987765544
Q ss_pred ---EeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCC-------------------CCCCccceEEeccCCC
Q 010748 349 ---WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPD-------------------STSQQSSFTLHAHDKA 406 (502)
Q Consensus 349 ---~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~-------------------~~~~~~~~~~~~h~~~ 406 (502)
..+...|.+++|+|++. ++++++.||.|++||+++...... ............|...
T Consensus 155 ~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (366)
T 3k26_A 155 GGVEGHRDEVLSADYDLLGE-KIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNY 233 (366)
T ss_dssp CSTTSCSSCEEEEEECTTSS-EEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSC
T ss_pred cccccccCceeEEEECCCCC-EEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcce
Confidence 46888999999999765 899999999999999987521000 0000112233349999
Q ss_pred eeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCe------------eEEEEecCCCCcEEEEEEcCC--CCcEEEEEeCCC
Q 010748 407 VCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP------------SCIASRNPKAGAVFSVAFSED--SPFVLAIGGSKG 472 (502)
Q Consensus 407 v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~------------~~~~~~~~~~~~v~~~~~spd--~~~ll~sg~~dg 472 (502)
|.+++|+ + .+|++++.|+.|++||+.+... ..+..+..|...|++++|+|+ +. +|++|+.||
T Consensus 234 v~~~~~~--~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~-~l~~~~~dg 309 (366)
T 3k26_A 234 VDCVRWL--G-DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQK-MLALGNQVG 309 (366)
T ss_dssp CCEEEEE--T-TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSS-EEEEECTTS
T ss_pred EEEEEEc--C-CEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCc-EEEEEecCC
Confidence 9999999 3 7999999999999999987653 457778889999999999999 88 599999999
Q ss_pred cEEEEECCCCcccc
Q 010748 473 KLEIWDTLSDAGIS 486 (502)
Q Consensus 473 ~i~vwd~~~~~~~~ 486 (502)
.|++||+.+++.+.
T Consensus 310 ~i~vwd~~~~~~~~ 323 (366)
T 3k26_A 310 KLYVWDLEVEDPHK 323 (366)
T ss_dssp CEEEEECCSSSGGG
T ss_pred cEEEEECCCCCCcc
Confidence 99999999987654
No 96
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=4.7e-30 Score=259.83 Aligned_cols=232 Identities=19% Similarity=0.338 Sum_probs=199.3
Q ss_pred CCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEec
Q 010748 208 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA 287 (502)
Q Consensus 208 ~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~ 287 (502)
++++|++|+.||.|++||+.++. ....+.+|...|++++|+|+ + +|++|+.
T Consensus 131 ~~~~l~sgs~dg~i~vwd~~~~~---------------------------~~~~~~~h~~~V~~l~~~~~-~-~l~s~s~ 181 (464)
T 3v7d_B 131 EDNYVITGADDKMIRVYDSINKK---------------------------FLLQLSGHDGGVWALKYAHG-G-ILVSGST 181 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTE---------------------------EEEEECCCSSCEEEEEECST-T-EEEEEET
T ss_pred CCCEEEEEcCCCcEEEEECCCCc---------------------------EEEEEeCCCcCEEEEEEcCC-C-EEEEEeC
Confidence 57899999999999999987532 22345589999999999998 4 8999999
Q ss_pred CCcEEEEeCCCCeeeEeeccCCCCeEEEEEcC--CCCcEEEEEeCCCcEEEEecCCCCCcc-------------------
Q 010748 288 DKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNH--HSPQILLSGSFDRSVVMKDARISTHSG------------------- 346 (502)
Q Consensus 288 dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~~~~l~s~s~dg~i~iwd~~~~~~~~------------------- 346 (502)
||+|++||+.+++++..+.+|...|.+++|++ ++ .+|++|+.||+|++||+++.....
T Consensus 182 dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (464)
T 3v7d_B 182 DRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNI-KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENP 260 (464)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSC-EEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCT
T ss_pred CCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCC-CEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCe
Confidence 99999999999999999999999999999985 55 899999999999999998765321
Q ss_pred ----ceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEE
Q 010748 347 ----FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLAT 422 (502)
Q Consensus 347 ----~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t 422 (502)
....+...+.++.. ++ .++++++.||.|++||+++. .++..+.+|...|.+++|+|++ .+|++
T Consensus 261 ~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~d~~i~vwd~~~~---------~~~~~~~~~~~~v~~~~~~~~~-~~l~s 327 (464)
T 3v7d_B 261 YFVGVLRGHMASVRTVSG--HG-NIVVSGSYDNTLIVWDVAQM---------KCLYILSGHTDRIYSTIYDHER-KRCIS 327 (464)
T ss_dssp TEEEEECCCSSCEEEEEE--ET-TEEEEEETTSCEEEEETTTT---------EEEEEECCCSSCEEEEEEETTT-TEEEE
T ss_pred EEEEEccCccceEEEEcC--CC-CEEEEEeCCCeEEEEECCCC---------cEEEEecCCCCCEEEEEEcCCC-CEEEE
Confidence 12345566776644 33 48999999999999999986 7788899999999999999988 89999
Q ss_pred EeCCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccc
Q 010748 423 GSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 487 (502)
Q Consensus 423 ~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~ 487 (502)
|+.||.|++||+.+++ ++..+.+|...|.+++|++ . .|++|+.||.|++||+.++.....
T Consensus 328 g~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~--~-~l~s~s~dg~v~vwd~~~~~~~~~ 387 (464)
T 3v7d_B 328 ASMDTTIRIWDLENGE--LMYTLQGHTALVGLLRLSD--K-FLVSAAADGSIRGWDANDYSRKFS 387 (464)
T ss_dssp EETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECS--S-EEEEEETTSEEEEEETTTCCEEEE
T ss_pred EeCCCcEEEEECCCCc--EEEEEeCCCCcEEEEEEcC--C-EEEEEeCCCcEEEEECCCCceeee
Confidence 9999999999999887 6778889999999999984 4 599999999999999998775543
No 97
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.98 E-value=7.6e-31 Score=255.52 Aligned_cols=247 Identities=17% Similarity=0.286 Sum_probs=197.7
Q ss_pred CcceeeeecCCCCCCCCCC-EEEEecC---CCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCccc
Q 010748 192 FPLCMAWLDCPLKDREKGN-FMAVGSM---EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTD 267 (502)
Q Consensus 192 ~~~~~~~~~~~~~~s~~~~-~la~g~~---dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 267 (502)
...+++| +|++. ++++|+. ||.|+||++.+..... ....+|..
T Consensus 20 ~v~~~~~-------~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~--------------------------~~~~~~~~ 66 (357)
T 3i2n_A 20 TVFDCKW-------VPCSAKFVTMGNFARGTGVIQLYEIQHGDLKL--------------------------LREIEKAK 66 (357)
T ss_dssp CEEEEEE-------CTTSSEEEEEEC--CCCEEEEEEEECSSSEEE--------------------------EEEEEESS
T ss_pred ceEEEEE-------cCCCceEEEecCccCCCcEEEEEeCCCCcccc--------------------------eeeecccC
Confidence 3478887 78775 5567766 8999999997533211 11226899
Q ss_pred ceeeEEeccCC--CcEEEEEecCCcEEEEeCCCCe-eeEeeccCCCCeEEEEE------cCCCCcEEEEEeCCCcEEEEe
Q 010748 268 SVLGLAWNKEF--RNILASASADKQVKIWDVAAGK-CNLTLEHHTDKVQAVAW------NHHSPQILLSGSFDRSVVMKD 338 (502)
Q Consensus 268 ~V~~l~~~~~~--~~~l~sgs~dg~v~vwd~~~~~-~~~~~~~h~~~v~~l~~------~~~~~~~l~s~s~dg~i~iwd 338 (502)
.|.+++|+|++ +.+|++|+.||.|++||+.+++ ++..+.+|...|.++.| +|++ .+|++++.||.|++||
T Consensus 67 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~-~~l~~~~~d~~i~vwd 145 (357)
T 3i2n_A 67 PIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGA-PEIVTGSRDGTVKVWD 145 (357)
T ss_dssp CEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CC-CEEEEEETTSCEEEEC
T ss_pred cEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCc-cEEEEEeCCCeEEEEe
Confidence 99999999984 4799999999999999999988 88999999999999965 5677 8999999999999999
Q ss_pred cCCCCC-ccceEeec----CCeeEEE----eCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeE
Q 010748 339 ARISTH-SGFKWAVA----ADVESLA----WDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCT 409 (502)
Q Consensus 339 ~~~~~~-~~~~~~~~----~~v~~v~----~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 409 (502)
+++... ......+. ..+.+++ |+|++. ++++++.+|.|++||+++. .. .....|...|.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~---------~~-~~~~~~~~~v~~ 214 (357)
T 3i2n_A 146 PRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEER-VVCAGYDNGDIKLFDLRNM---------AL-RWETNIKNGVCS 214 (357)
T ss_dssp TTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCC-EEEEEETTSEEEEEETTTT---------EE-EEEEECSSCEEE
T ss_pred CCCCCCcceeccccCCCCCCceEEEEEEeccCCCCC-EEEEEccCCeEEEEECccC---------ce-eeecCCCCceEE
Confidence 998773 33232333 3788888 677654 8999999999999999976 33 445678999999
Q ss_pred EEEcC---CCCCEEEEEeCCCcEEEEECCCCCeeE---EEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010748 410 ISYNP---LVPNLLATGSTDKMVKLWDLSNNQPSC---IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 410 l~~sp---~~~~~l~t~s~dg~i~vwd~~~~~~~~---~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~ 483 (502)
++|+| ++ .+|++++.||.|++||+++.++.. ......|...|++++|+|+++.+|++|+.||.|++||+.++.
T Consensus 215 ~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 215 LEFDRKDISM-NKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp EEESCSSSSC-CEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCS
T ss_pred EEcCCCCCCC-CEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCc
Confidence 99999 76 899999999999999998765322 223458999999999999998669999999999999998755
Q ss_pred c
Q 010748 484 G 484 (502)
Q Consensus 484 ~ 484 (502)
.
T Consensus 294 ~ 294 (357)
T 3i2n_A 294 Q 294 (357)
T ss_dssp C
T ss_pred c
Confidence 3
No 98
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.98 E-value=3e-31 Score=284.35 Aligned_cols=251 Identities=23% Similarity=0.338 Sum_probs=208.3
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEE
Q 010748 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.|++| +|++++|++|+.||.|+||++.... ......+.+|..+|++++
T Consensus 13 ~~l~~-------s~dg~~latg~~dg~I~vwd~~~~~-------------------------~~~~~~l~~h~~~V~~l~ 60 (753)
T 3jro_A 13 HDAVL-------DYYGKRLATCSSDKTIKIFEVEGET-------------------------HKLIDTLTGHEGPVWRVD 60 (753)
T ss_dssp EEECC-------CSSSCCEEEEETTTEEEEEEEETTE-------------------------EEEEEEECCCSSCEEEEE
T ss_pred EEEEE-------CCCCCeEEEEECCCcEEEEecCCCC-------------------------CccceeccCCcCceEEEE
Confidence 56666 7899999999999999999986311 223335568999999999
Q ss_pred eccCC-CcEEEEEecCCcEEEEeCCCCe--eeEeeccCCCCeEEEEEcCC--CCcEEEEEeCCCcEEEEecCCCCC--cc
Q 010748 274 WNKEF-RNILASASADKQVKIWDVAAGK--CNLTLEHHTDKVQAVAWNHH--SPQILLSGSFDRSVVMKDARISTH--SG 346 (502)
Q Consensus 274 ~~~~~-~~~l~sgs~dg~v~vwd~~~~~--~~~~~~~h~~~v~~l~~~~~--~~~~l~s~s~dg~i~iwd~~~~~~--~~ 346 (502)
|+|+. +++|++|+.||+|++||+.+++ .+..+.+|...|++++|+|+ + .+|++|+.||.|++||+++... ..
T Consensus 61 ~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~-~~l~sgs~dg~I~vwdl~~~~~~~~~ 139 (753)
T 3jro_A 61 WAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKENGTTSPI 139 (753)
T ss_dssp ECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCSSSCCCCE
T ss_pred ecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCC-CEEEEEeCCCcEEEEEeecCCCccee
Confidence 98762 4699999999999999999987 77888899999999999999 6 8999999999999999998743 23
Q ss_pred ceEeecCCeeEEEeCCC------------CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcC
Q 010748 347 FKWAVAADVESLAWDPH------------AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNP 414 (502)
Q Consensus 347 ~~~~~~~~v~~v~~~~~------------~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp 414 (502)
....+...|.+++|+|. ++.++++|+.||.|++||+++.... ......+.+|...|++++|+|
T Consensus 140 ~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~-----~~~~~~~~~h~~~V~~l~~sp 214 (753)
T 3jro_A 140 IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT-----YVLESTLEGHSDWVRDVAWSP 214 (753)
T ss_dssp EEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTE-----EEEEEEECCCSSCEEEEEECC
T ss_pred EeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCccc-----ceeeeeecCCCCcEEEEEecc
Confidence 34567889999999995 2458999999999999999876210 145567788999999999999
Q ss_pred CC--CCEEEEEeCCCcEEEEECCCCCee---EEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010748 415 LV--PNLLATGSTDKMVKLWDLSNNQPS---CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 415 ~~--~~~l~t~s~dg~i~vwd~~~~~~~---~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~ 483 (502)
++ +.+|++|+.||.|++||+.++... .......|.+.|++++|+|++.+ |++|+.||.|+||++.++.
T Consensus 215 ~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~-l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 215 TVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNV-LALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp CCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCC-EEEECSSSCEECCBCCSSS
T ss_pred CCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCE-EEEEcCCCEEEEEecCCCC
Confidence 93 399999999999999999886421 23334568889999999999995 8999999999999998644
No 99
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.98 E-value=2.4e-30 Score=271.05 Aligned_cols=281 Identities=12% Similarity=0.176 Sum_probs=221.4
Q ss_pred CCCccc-cccccccC--CCceEEEEEecCCcceeEEEEEecC------CCCCCCeeeeeccccCCCcceeeeecCCCCCC
Q 010748 136 DEDSED-LEDMTINP--NDAVIVCARNEDDVSHLEVYILEES------DGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDR 206 (502)
Q Consensus 136 ~~~~~~-v~~~~~~p--~~~~l~~~~~~~~~~~l~v~~~~~~------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s 206 (502)
..|... |.+++|+| ++++|++|+.++ .+.||.+... .......+..| .....+++| +
T Consensus 60 ~~h~~~~v~~~~~sp~~~~~~l~s~~~dg---~v~vw~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~-------s 125 (615)
T 1pgu_A 60 TGHGSSVVTTVKFSPIKGSQYLCSGDESG---KVIVWGWTFDKESNSVEVNVKSEFQVL----AGPISDISW-------D 125 (615)
T ss_dssp CTTTTSCEEEEEECSSTTCCEEEEEETTS---EEEEEEEEEEGGGTEEEEEEEEEEECC----SSCEEEEEE-------C
T ss_pred ecCCCceEEEEEECcCCCCCEEEEecCCC---EEEEEeCCCCcccccccccccchhhcc----cccEEEEEE-------e
Confidence 457888 99999999 999999999876 6788887533 11000111112 233466766 7
Q ss_pred CCCCEEEEecCC----CcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEE
Q 010748 207 EKGNFMAVGSME----PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNIL 282 (502)
Q Consensus 207 ~~~~~la~g~~d----g~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l 282 (502)
|++++|++++.+ +.|++|+.. .....+.+|...|.+++|+|++..+|
T Consensus 126 ~~~~~l~~~~~~~~~~~~v~~~d~~-----------------------------~~~~~~~~~~~~v~~~~~~~~~~~~l 176 (615)
T 1pgu_A 126 FEGRRLCVVGEGRDNFGVFISWDSG-----------------------------NSLGEVSGHSQRINACHLKQSRPMRS 176 (615)
T ss_dssp TTSSEEEEEECCSSCSEEEEETTTC-----------------------------CEEEECCSCSSCEEEEEECSSSSCEE
T ss_pred CCCCEEEEeccCCCCccEEEEEECC-----------------------------CcceeeecCCccEEEEEECCCCCcEE
Confidence 999999999988 689999842 12223457999999999999966689
Q ss_pred EEEecCCcEEEEeCCCCeeeEeeccCCC---CeEEEEEcCC-CCcEEEEEeCCCcEEEEecCCCCCccce-E---eecCC
Q 010748 283 ASASADKQVKIWDVAAGKCNLTLEHHTD---KVQAVAWNHH-SPQILLSGSFDRSVVMKDARISTHSGFK-W---AVAAD 354 (502)
Q Consensus 283 ~sgs~dg~v~vwd~~~~~~~~~~~~h~~---~v~~l~~~~~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~---~~~~~ 354 (502)
++|+.|+.|++||+.+++++..+.+|.. .|++++|+|+ + .+|++++.||.|++||+++++..... . .+...
T Consensus 177 ~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 255 (615)
T 1pgu_A 177 MTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSG-EFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGG 255 (615)
T ss_dssp EEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTC-CEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSC
T ss_pred EEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCC-CEEEEEeCCCeEEEEECCCCCEeEEecccccccCCc
Confidence 9999999999999999999999999999 9999999999 7 89999999999999999988766644 3 78889
Q ss_pred eeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEecc----CCCeeEEEEcCCCCCEEEEEeCCCcEE
Q 010748 355 VESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH----DKAVCTISYNPLVPNLLATGSTDKMVK 430 (502)
Q Consensus 355 v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h----~~~v~~l~~sp~~~~~l~t~s~dg~i~ 430 (502)
|.+++|+ ++ .++++++.+|.|++||+++. ..+..+..+ ...+.++.|. ++ .++++++.+|.|+
T Consensus 256 v~~~~~~-~~-~~l~~~~~d~~i~~wd~~~~---------~~~~~~~~~~~~~~~~~~~~~~~-~~-~~l~~~~~~g~i~ 322 (615)
T 1pgu_A 256 IFALSWL-DS-QKFATVGADATIRVWDVTTS---------KCVQKWTLDKQQLGNQQVGVVAT-GN-GRIISLSLDGTLN 322 (615)
T ss_dssp EEEEEES-SS-SEEEEEETTSEEEEEETTTT---------EEEEEEECCTTCGGGCEEEEEEE-ET-TEEEEEETTSCEE
T ss_pred eEEEEEc-CC-CEEEEEcCCCcEEEEECCCC---------cEEEEEcCCCCcccCceeEEEeC-CC-CeEEEEECCCCEE
Confidence 9999999 54 58999999999999999986 666677666 3678888886 55 8999999999999
Q ss_pred EEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECC
Q 010748 431 LWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTL 480 (502)
Q Consensus 431 vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~ 480 (502)
+||+.+++ .+..+.+|.+.|.+++| |+ |++++.||.|++|++.
T Consensus 323 ~~d~~~~~--~~~~~~~~~~~v~~~~~-~~----l~~~~~dg~i~~w~~~ 365 (615)
T 1pgu_A 323 FYELGHDE--VLKTISGHNKGITALTV-NP----LISGSYDGRIMEWSSS 365 (615)
T ss_dssp EEETTEEE--EEEEECCCSSCEEEEET-TT----TEEEETTSCEEETTTT
T ss_pred EEECCCCc--EEEEEeCCCCCEEEEEe-cC----cEEECCCCeEEEEEch
Confidence 99998865 45666677777777777 65 4445555555555543
No 100
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.98 E-value=6.1e-30 Score=254.17 Aligned_cols=234 Identities=23% Similarity=0.392 Sum_probs=197.2
Q ss_pred CCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecC
Q 010748 209 GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD 288 (502)
Q Consensus 209 ~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~d 288 (502)
++.+++++.++.|++|++.++.... .....|...|++++|+|+ +.+|++|+.|
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~~~--------------------------~~~~~~~~~v~~v~~s~~-~~~l~~~~~d 155 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSVSA--------------------------LAETDESTYVASVKWSHD-GSFLSVGLGN 155 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEE--------------------------EEECCTTCCEEEEEECTT-SSEEEEEETT
T ss_pred CCCEEEEECCCeEEEeeCCCCcEeE--------------------------eeecCCCCCEEEEEECCC-CCEEEEECCC
Confidence 4567888899999999997643221 111248899999999998 5699999999
Q ss_pred CcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCC-CccceEeecCCeeEEEeCCCCCCE
Q 010748 289 KQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST-HSGFKWAVAADVESLAWDPHAEHS 367 (502)
Q Consensus 289 g~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~-~~~~~~~~~~~v~~v~~~~~~~~~ 367 (502)
|.|++||+.+++.+..+.+|...|.+++|++ .+|++|+.||.|++||++... .......|...|.+++|+|++. +
T Consensus 156 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~ 231 (401)
T 4aez_A 156 GLVDIYDVESQTKLRTMAGHQARVGCLSWNR---HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGL-Q 231 (401)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS-E
T ss_pred CeEEEEECcCCeEEEEecCCCCceEEEEECC---CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCC-E
Confidence 9999999999999999999999999999953 689999999999999999544 3444557889999999999765 8
Q ss_pred EEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEe--CCCcEEEEECCCCCeeEEEEe
Q 010748 368 FVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS--TDKMVKLWDLSNNQPSCIASR 445 (502)
Q Consensus 368 ~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s--~dg~i~vwd~~~~~~~~~~~~ 445 (502)
+++|+.||.|++||+++. .++..+..|...|.+++|+|++..++++++ .|+.|++||+.+++. +..+
T Consensus 232 l~s~~~d~~v~iwd~~~~---------~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~--~~~~ 300 (401)
T 4aez_A 232 LASGGNDNVVQIWDARSS---------IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR--VNTV 300 (401)
T ss_dssp EEEEETTSCEEEEETTCS---------SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE--EEEE
T ss_pred EEEEeCCCeEEEccCCCC---------CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE--EEEE
Confidence 999999999999999986 678888899999999999998878888876 799999999999874 4444
Q ss_pred cCCCCcEEEEEEcCCCCcEEEE--EeCCCcEEEEECCCCcccc
Q 010748 446 NPKAGAVFSVAFSEDSPFVLAI--GGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 446 ~~~~~~v~~~~~spd~~~ll~s--g~~dg~i~vwd~~~~~~~~ 486 (502)
. +...|.+++|+|++++ |++ |+.+|.|+||++.++....
T Consensus 301 ~-~~~~v~~~~~s~~~~~-l~~~~g~~dg~i~v~~~~~~~~~~ 341 (401)
T 4aez_A 301 D-AGSQVTSLIWSPHSKE-IMSTHGFPDNNLSIWSYSSSGLTK 341 (401)
T ss_dssp E-CSSCEEEEEECSSSSE-EEEEECTTTCEEEEEEEETTEEEE
T ss_pred e-CCCcEEEEEECCCCCe-EEEEeecCCCcEEEEecCCcccee
Confidence 3 5578999999999996 555 4489999999998865543
No 101
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.98 E-value=8.8e-30 Score=256.99 Aligned_cols=241 Identities=11% Similarity=0.065 Sum_probs=189.9
Q ss_pred cceeeeecCCCCCCCCCCEE-EEecCCCcEEEeeCC--CCCCcCcceecCCcchhhhhhccccCCcccccccccCcccce
Q 010748 193 PLCMAWLDCPLKDREKGNFM-AVGSMEPAIEIWDLD--VIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSV 269 (502)
Q Consensus 193 ~~~~~~~~~~~~~s~~~~~l-a~g~~dg~I~iwdl~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V 269 (502)
..|++| +|++++| |+|+.||.|+||++. .+..+..+ ....|...|
T Consensus 105 v~~~~~-------s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~-------------------------~~~~~~~~v 152 (450)
T 2vdu_B 105 IRNLRL-------TSDESRLIACADSDKSLLVFDVDKTSKNVLKLR-------------------------KRFCFSKRP 152 (450)
T ss_dssp EEEEEE-------CTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEE-------------------------EEEECSSCE
T ss_pred eEEEEE-------cCCCCEEEEEECCCCeEEEEECcCCCCceeeee-------------------------ecccCCCCc
Confidence 456666 8999996 899999999999997 43322111 112467899
Q ss_pred eeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeE----eeccCCCCeEEEEEcCC---CCcEEEEEeCCCcEEEEecCCC
Q 010748 270 LGLAWNKEFRNILASASADKQVKIWDVAAGKCNL----TLEHHTDKVQAVAWNHH---SPQILLSGSFDRSVVMKDARIS 342 (502)
Q Consensus 270 ~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~----~~~~h~~~v~~l~~~~~---~~~~l~s~s~dg~i~iwd~~~~ 342 (502)
++++|+|+ +.+|++|+.+|.|++|++.+++... .+.+|...|++++|+|+ + .+|++|+.|+.|++||+++.
T Consensus 153 ~~~~~sp~-~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~-~~l~s~~~d~~i~vwd~~~~ 230 (450)
T 2vdu_B 153 NAISIAED-DTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGH-QFIITSDRDEHIKISHYPQC 230 (450)
T ss_dssp EEEEECTT-SSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSC-EEEEEEETTSCEEEEEESCT
T ss_pred eEEEEcCC-CCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCC-cEEEEEcCCCcEEEEECCCC
Confidence 99999999 5699999999999999998887554 77889999999999999 7 89999999999999999988
Q ss_pred CCccc-eEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEe--------------------
Q 010748 343 THSGF-KWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH-------------------- 401 (502)
Q Consensus 343 ~~~~~-~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~-------------------- 401 (502)
..... ...|...|.+++|+ ++ .++++++.|+.|++||++++ ..+..+.
T Consensus 231 ~~~~~~~~~h~~~v~~~~~s-d~-~~l~s~~~d~~v~vwd~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (450)
T 2vdu_B 231 FIVDKWLFGHKHFVSSICCG-KD-YLLLSAGGDDKIFAWDWKTG---------KNLSTFDYNSLIKPYLNDQHLAPPRFQ 299 (450)
T ss_dssp TCEEEECCCCSSCEEEEEEC-ST-TEEEEEESSSEEEEEETTTC---------CEEEEEECHHHHGGGCCTTSBC-----
T ss_pred ceeeeeecCCCCceEEEEEC-CC-CEEEEEeCCCeEEEEECCCC---------cEeeeecchhhhhhhhhhccccccccc
Confidence 76654 34688999999999 65 48999999999999999987 4444443
Q ss_pred -----ccCCCeeEEEEcCCCCCEEEEEe-CCCcEEEEEC--CCC-CeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeC--
Q 010748 402 -----AHDKAVCTISYNPLVPNLLATGS-TDKMVKLWDL--SNN-QPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGS-- 470 (502)
Q Consensus 402 -----~h~~~v~~l~~sp~~~~~l~t~s-~dg~i~vwd~--~~~-~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~-- 470 (502)
.+...|.+++|+|++ .+|++++ .++.|++|++ ... ....+..+..+ +.|.+++|+|++. ++++++.
T Consensus 300 ~~~~~~~~~~v~~i~~~~~~-~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~-~v~~~~~~~ 376 (450)
T 2vdu_B 300 NENNDIIEFAVSKIIKSKNL-PFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEF-QVTLDNKES 376 (450)
T ss_dssp -----CBCCCEEEEEECSSS-SEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEE-EEEECCTTC
T ss_pred ccccccceEEEEEEEEeCCC-CEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcE-EEEEecccC
Confidence 234579999999988 7888888 8999999999 443 33456666677 8899999999642 3443332
Q ss_pred ----CCcEEEEECCC
Q 010748 471 ----KGKLEIWDTLS 481 (502)
Q Consensus 471 ----dg~i~vwd~~~ 481 (502)
+..|.||.+..
T Consensus 377 ~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 377 SGVQKNFAKFIEYNL 391 (450)
T ss_dssp CSSCCCSEEEEEEET
T ss_pred CCCCCcceEEEEEEc
Confidence 45588887654
No 102
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=4.7e-30 Score=248.30 Aligned_cols=271 Identities=15% Similarity=0.276 Sum_probs=205.2
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeee-eeccccCCCcceeeeecCCCCCCC--CCCEE
Q 010748 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYV-HHHIIIPAFPLCMAWLDCPLKDRE--KGNFM 212 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~s~--~~~~l 212 (502)
..|.+.|.+++|+|++++|++|+.++ .++||.+..... .... +.-........|++| +| ++++|
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~~dg---~i~iw~~~~~~~---~~~~~~~~~~~~~~v~~~~~-------~~~~d~~~l 74 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCSSDQ---HIKVFKLDKDTS---NWELSDSWRAHDSSIVAIDW-------ASPEYGRII 74 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTS---EEEEEEECSSSC---CEEEEEEEECCSSCEEEEEE-------CCGGGCSEE
T ss_pred cccccceeEEEEcCCCCEEEEeeCCC---eEEEEECCCCCC---cceecceeccCCCcEEEEEE-------cCCCCCCEE
Confidence 45889999999999999999999886 667777765432 1111 110112233478888 56 59999
Q ss_pred EEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCC-CcEEEEEecCCcE
Q 010748 213 AVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEF-RNILASASADKQV 291 (502)
Q Consensus 213 a~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~-~~~l~sgs~dg~v 291 (502)
++|+.||.|+|||+........ .........+.+|...|.+++|+|+. +.+|++|+.||.|
T Consensus 75 ~s~~~dg~v~vwd~~~~~~~~~------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v 136 (351)
T 3f3f_A 75 ASASYDKTVKLWEEDPDQEECS------------------GRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGIL 136 (351)
T ss_dssp EEEETTSCEEEEEECTTSCTTS------------------SCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEE
T ss_pred EEEcCCCeEEEEecCCCccccc------------------ccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcE
Confidence 9999999999999976432110 01113344556899999999999983 3589999999999
Q ss_pred EEEeCCCCeeeEeec-------------cCCCCeEEEEEcCC--CCcEEEEEeCCCcEEEEecCCCCC--ccceEeecCC
Q 010748 292 KIWDVAAGKCNLTLE-------------HHTDKVQAVAWNHH--SPQILLSGSFDRSVVMKDARISTH--SGFKWAVAAD 354 (502)
Q Consensus 292 ~vwd~~~~~~~~~~~-------------~h~~~v~~l~~~~~--~~~~l~s~s~dg~i~iwd~~~~~~--~~~~~~~~~~ 354 (502)
++||+.+++.+..+. .|...+.++.|+|. .+.+|++++.++.+.+|+...... ......|...
T Consensus 137 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 216 (351)
T 3f3f_A 137 RLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSL 216 (351)
T ss_dssp EEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSC
T ss_pred EEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcc
Confidence 999999886554432 58889999999997 238999999999998888776654 2223357889
Q ss_pred eeEEEeCCCCC---CEEEEEeCCCcEEEEECCCCCCCCC-------------------------------------CCCC
Q 010748 355 VESLAWDPHAE---HSFVVSLEDGTIKGFDIRTAKSDPD-------------------------------------STSQ 394 (502)
Q Consensus 355 v~~v~~~~~~~---~~~~~~~~dg~v~i~d~~~~~~~~~-------------------------------------~~~~ 394 (502)
|.+++|+|++. .++++++.||.|++||++....... ....
T Consensus 217 i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (351)
T 3f3f_A 217 IRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQV 296 (351)
T ss_dssp EEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEE
T ss_pred eeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccc
Confidence 99999999863 5899999999999999987421000 0001
Q ss_pred ccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCC
Q 010748 395 QSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 438 (502)
Q Consensus 395 ~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~ 438 (502)
..+..+.+|...|++++|+|++ .+|++|+.||.|++|++.+++
T Consensus 297 ~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 297 ELLSEHDDHNGEVWSVSWNLTG-TILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp EEEEEECTTSSCEEEEEECSSS-CCEEEEETTSCEEEEEECTTS
T ss_pred cEEEEEecccccEEEEEEcCCC-CEEEEecCCCcEEEEecCcCc
Confidence 4566678899999999999998 899999999999999998865
No 103
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9.8e-30 Score=242.94 Aligned_cols=235 Identities=16% Similarity=0.170 Sum_probs=198.0
Q ss_pred CCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEe
Q 010748 207 EKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS 286 (502)
Q Consensus 207 ~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs 286 (502)
+++++|++|+.||.|++|++.... ....+..|...|.+++|+|+ +.+|++|+
T Consensus 27 ~~~~~l~s~~~dg~v~vw~~~~~~---------------------------~~~~~~~~~~~v~~~~~~~~-~~~l~~~~ 78 (313)
T 3odt_A 27 VDDSKVASVSRDGTVRLWSKDDQW---------------------------LGTVVYTGQGFLNSVCYDSE-KELLLFGG 78 (313)
T ss_dssp EETTEEEEEETTSEEEEEEESSSE---------------------------EEEEEEECSSCEEEEEEETT-TTEEEEEE
T ss_pred cCCCEEEEEEcCCcEEEEECCCCE---------------------------EEEEeecCCccEEEEEECCC-CCEEEEec
Confidence 478999999999999999986422 22234468999999999999 66999999
Q ss_pred cCCcEEEEeCCCC---eeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCC
Q 010748 287 ADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPH 363 (502)
Q Consensus 287 ~dg~v~vwd~~~~---~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~ 363 (502)
.||.|++|++... +.+..+.+|...|.++.|. + .+|++++.||.|++|| ..........+...+.+++|.|.
T Consensus 79 ~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~-~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~ 153 (313)
T 3odt_A 79 KDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ--D-GVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSF 153 (313)
T ss_dssp TTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE--T-TEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEET
T ss_pred CCCeEEEEEeeecCCCCcccchhhcccCEEEEEec--C-CEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccC
Confidence 9999999998754 6677888999999999993 4 7899999999999999 34444445568889999999985
Q ss_pred CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEec-cCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEE
Q 010748 364 AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA-HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCI 442 (502)
Q Consensus 364 ~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~ 442 (502)
....+++++.+|.|++||.. .....+.. |...+.+++|+|++ . +++++.||.|++||+++++ .+
T Consensus 154 ~~~~l~~~~~d~~i~i~d~~-----------~~~~~~~~~~~~~i~~~~~~~~~-~-~~~~~~dg~i~i~d~~~~~--~~ 218 (313)
T 3odt_A 154 SENKFLTASADKTIKLWQND-----------KVIKTFSGIHNDVVRHLAVVDDG-H-FISCSNDGLIKLVDMHTGD--VL 218 (313)
T ss_dssp TTTEEEEEETTSCEEEEETT-----------EEEEEECSSCSSCEEEEEEEETT-E-EEEEETTSEEEEEETTTCC--EE
T ss_pred CCCEEEEEECCCCEEEEecC-----------ceEEEEeccCcccEEEEEEcCCC-e-EEEccCCCeEEEEECCchh--hh
Confidence 55689999999999999943 55666666 89999999999987 4 9999999999999999887 56
Q ss_pred EEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccccC
Q 010748 443 ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSK 491 (502)
Q Consensus 443 ~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~~~ 491 (502)
..+..|.+.|++++|+|++. |++++.||.|++||+.+++.+.....+
T Consensus 219 ~~~~~~~~~i~~~~~~~~~~--l~~~~~dg~v~iwd~~~~~~~~~~~~~ 265 (313)
T 3odt_A 219 RTYEGHESFVYCIKLLPNGD--IVSCGEDRTVRIWSKENGSLKQVITLP 265 (313)
T ss_dssp EEEECCSSCEEEEEECTTSC--EEEEETTSEEEEECTTTCCEEEEEECS
T ss_pred hhhhcCCceEEEEEEecCCC--EEEEecCCEEEEEECCCCceeEEEecc
Confidence 67778999999999999994 788999999999999999877665444
No 104
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=1e-28 Score=246.88 Aligned_cols=252 Identities=23% Similarity=0.433 Sum_probs=207.1
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEE
Q 010748 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.++.| |+ +++||+|. |++|+|||+.++..... ..+.+|...|++|+
T Consensus 109 ~~l~w-------S~-~n~lAvgl-d~tV~lWd~~tg~~~~~-------------------------~~~~~~~~~V~sv~ 154 (420)
T 4gga_A 109 NLVDW-------SS-GNVLAVAL-DNSVYLWSASSGDILQL-------------------------LQMEQPGEYISSVA 154 (420)
T ss_dssp BCEEE-------CT-TSEEEEEE-TTEEEEEETTTCCEEEE-------------------------EECCSTTCCEEEEE
T ss_pred eeEEE-------CC-CCEEEEEe-CCEEEEEECCCCCEEEE-------------------------EEecCCCCcEEEEE
Confidence 45677 55 46888886 89999999987543321 22346889999999
Q ss_pred eccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCc-cceEeec
Q 010748 274 WNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS-GFKWAVA 352 (502)
Q Consensus 274 ~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~-~~~~~~~ 352 (502)
|+|+ +.+||+|+.||+|+|||+.+++++..+.+|...+.++.|++ .+|++|+.|+.+++||.+..... .....|.
T Consensus 155 fspd-g~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~ 230 (420)
T 4gga_A 155 WIKE-GNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHS 230 (420)
T ss_dssp ECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCS
T ss_pred ECCC-CCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeecccceeeEEecccc
Confidence 9999 56999999999999999999999999999999999999864 68999999999999999876554 3345688
Q ss_pred CCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEE--eCCCcEE
Q 010748 353 ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMVK 430 (502)
Q Consensus 353 ~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~--s~dg~i~ 430 (502)
..+..+.|+|.+. ++++++.||.|++|+..+.... ...+.....|...|.+++|+|.++.+++++ +.|++|+
T Consensus 231 ~~~~~~~~~~~g~-~l~s~~~D~~v~i~~~~~~~~~-----~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~ 304 (420)
T 4gga_A 231 QEVCGLRWAPDGR-HLASGGNDNLVNVWPSAPGEGG-----WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIR 304 (420)
T ss_dssp SCEEEEEECTTSS-EEEEEETTSCEEEEESSCCSSC-----SCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEE
T ss_pred cceeeeeecCCCC-eeeeeeccccceEEeecccccc-----ceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEE
Confidence 8999999999865 8999999999999999876321 245677888999999999999887888775 4799999
Q ss_pred EEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEe-CCCcEEEEECCCCccccccccCC
Q 010748 431 LWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGG-SKGKLEIWDTLSDAGISNRFSKY 492 (502)
Q Consensus 431 vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~-~dg~i~vwd~~~~~~~~~~~~~~ 492 (502)
+||+.+++ +...+..+ ..+.++.|+|++.+++++++ .||.|+|||+.+++++..+-+|.
T Consensus 305 iwd~~t~~--~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~ 364 (420)
T 4gga_A 305 IWNVCSGA--CLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHT 364 (420)
T ss_dssp EEETTTTE--EEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCS
T ss_pred EEeCCccc--cceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCC
Confidence 99999987 44445444 57999999999997554433 68999999999999988776654
No 105
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=8.5e-30 Score=248.75 Aligned_cols=283 Identities=12% Similarity=0.156 Sum_probs=205.1
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEE-EE
Q 010748 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFM-AV 214 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l-a~ 214 (502)
..|...|.+++|+|++++|++|+.++ ++||..+... .++..+. .. ..++.+ .++++++ ++
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~~~~----~~iw~~~~~~----~~~~~~~---~~-~~~~~~-------~~~~~~~~~~ 76 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILSTLKS----FEIYNVHPVA----HIMSQEM---RH-LSKVRM-------LHRTNYVAFV 76 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEECSSE----EEEEEETTEE----EEEEEEC---SC-CCEEEE-------CTTSSEEEEE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCE----EEEEecCCcc----eeeeeec---CC-eEEEEE-------cCCCCEEEEE
Confidence 45888999999999999999987553 5677655332 1221111 11 233444 4566666 56
Q ss_pred ecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEE
Q 010748 215 GSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIW 294 (502)
Q Consensus 215 g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vw 294 (502)
|+.++.|+|||+.++..+. .+ .|...|.+++|+++ .++++ .++.|++|
T Consensus 77 ~~~d~~v~iWd~~~~~~~~---------------------------~~-~~~~~v~~v~~~~~---~~~~~-~~~~i~i~ 124 (355)
T 3vu4_A 77 TGVKEVVHIWDDVKKQDVS---------------------------RI-KVDAPVKDLFLSRE---FIVVS-YGDVISVF 124 (355)
T ss_dssp CSSTTEEEEEETTTTEEEE---------------------------EE-ECSSCEEEEEECSS---EEEEE-ETTEEEEE
T ss_pred ECCccEEEEEECCCCcEEE---------------------------EE-ECCCceEEEEEcCC---EEEEE-EcCEEEEE
Confidence 8888999999997543221 11 25678999999987 34444 47899999
Q ss_pred eCCCC-eeeEeeccCCCCeEEEEEcCCCCcEEEE--EeCCCcEEEEecCCCC----------------CccceEeecCCe
Q 010748 295 DVAAG-KCNLTLEHHTDKVQAVAWNHHSPQILLS--GSFDRSVVMKDARIST----------------HSGFKWAVAADV 355 (502)
Q Consensus 295 d~~~~-~~~~~~~~h~~~v~~l~~~~~~~~~l~s--~s~dg~i~iwd~~~~~----------------~~~~~~~~~~~v 355 (502)
|+.++ +.+..+.. +...+++++ .++++ |+.+|.|++||+++.. .......|...|
T Consensus 125 d~~~~~~~~~~~~~---~~~~~~~s~---~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v 198 (355)
T 3vu4_A 125 KFGNPWKRITDDIR---FGGVCEFSN---GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPI 198 (355)
T ss_dssp ESSTTCCBSSCCEE---EEEEEEEET---TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCE
T ss_pred ECCCCceeeEEecc---CCceEEEEc---cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCce
Confidence 99988 77776664 445566676 34444 6899999999999765 134456788999
Q ss_pred eEEEeCCCCCCEEEEEeCCCc-EEEEECCCCCCCCCCCCCccceEEe-c-cCCCeeEEEEcCCCCCEEEEEeCCCcEEEE
Q 010748 356 ESLAWDPHAEHSFVVSLEDGT-IKGFDIRTAKSDPDSTSQQSSFTLH-A-HDKAVCTISYNPLVPNLLATGSTDKMVKLW 432 (502)
Q Consensus 356 ~~v~~~~~~~~~~~~~~~dg~-v~i~d~~~~~~~~~~~~~~~~~~~~-~-h~~~v~~l~~sp~~~~~l~t~s~dg~i~vw 432 (502)
.+++|+|++. ++++|+.||+ |++||++++ ..+..+. + |...|++++|+|++ .+|++++.|++|++|
T Consensus 199 ~~~~~s~~g~-~l~s~s~d~~~v~iwd~~~~---------~~~~~~~~g~h~~~v~~~~~s~~~-~~l~s~s~d~~v~iw 267 (355)
T 3vu4_A 199 KMVRLNRKSD-MVATCSQDGTIIRVFKTEDG---------VLVREFRRGLDRADVVDMKWSTDG-SKLAVVSDKWTLHVF 267 (355)
T ss_dssp EEEEECTTSS-EEEEEETTCSEEEEEETTTC---------CEEEEEECTTCCSCEEEEEECTTS-CEEEEEETTCEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCCEEEEEECCCC---------cEEEEEEcCCCCCcEEEEEECCCC-CEEEEEECCCEEEEE
Confidence 9999999865 8999999998 999999987 6777787 5 99999999999998 999999999999999
Q ss_pred ECCCCCeeEEEE--------------------ec-CCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccc
Q 010748 433 DLSNNQPSCIAS--------------------RN-PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 487 (502)
Q Consensus 433 d~~~~~~~~~~~--------------------~~-~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~ 487 (502)
|+.......... +. ........++|++++. .|++++.||.+++|++..+....+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~-~l~~~~~dg~~~~~~~~~~~~~~~ 342 (355)
T 3vu4_A 268 EIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESS-LVVVWPHTRMIETFKVVFDDEMER 342 (355)
T ss_dssp ESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSE-EEEEETTTTEEEEEEEEEETTTTE
T ss_pred EccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCC-EEEEEeCCCeEEEEEEEcCCCCce
Confidence 997653211111 11 1122346689999998 488899999999999987665444
No 106
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=3.4e-29 Score=251.50 Aligned_cols=224 Identities=27% Similarity=0.482 Sum_probs=196.1
Q ss_pred CCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEe
Q 010748 207 EKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS 286 (502)
Q Consensus 207 ~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs 286 (502)
.++++|++|+.||.|++||+.++.. ...+.+|...|.+++| + +.+|++|+
T Consensus 141 ~d~~~l~~g~~dg~i~iwd~~~~~~---------------------------~~~~~~h~~~v~~l~~--~-~~~l~sg~ 190 (435)
T 1p22_A 141 YDDQKIVSGLRDNTIKIWDKNTLEC---------------------------KRILTGHTGSVLCLQY--D-ERVIITGS 190 (435)
T ss_dssp CCSSEEEEEESSSCEEEEESSSCCE---------------------------EEEECCCSSCEEEEEC--C-SSEEEEEE
T ss_pred ECCCEEEEEeCCCeEEEEeCCCCeE---------------------------EEEEcCCCCcEEEEEE--C-CCEEEEEc
Confidence 3799999999999999999875332 2345589999999999 3 45999999
Q ss_pred cCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCc---cceEeecCCeeEEEeCCC
Q 010748 287 ADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS---GFKWAVAADVESLAWDPH 363 (502)
Q Consensus 287 ~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~---~~~~~~~~~v~~v~~~~~ 363 (502)
.||+|++||+.+++++..+.+|...|.+++|++ .+|++|+.||.|++||+++.... .....+...|.+++|+
T Consensus 191 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~-- 265 (435)
T 1p22_A 191 SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD-- 265 (435)
T ss_dssp TTSCEEEEESSSCCEEEEECCCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC--
Confidence 999999999999999999999999999999974 58999999999999999987765 3344678899999993
Q ss_pred CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEE
Q 010748 364 AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 443 (502)
Q Consensus 364 ~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~ 443 (502)
+.++++|+.||.|++||+++. ..+..+.+|...|.++.|+ + .+|++|+.||.|++||+++++ ++.
T Consensus 266 -~~~l~s~~~dg~i~vwd~~~~---------~~~~~~~~~~~~v~~~~~~--~-~~l~~g~~dg~i~iwd~~~~~--~~~ 330 (435)
T 1p22_A 266 -DKYIVSASGDRTIKVWNTSTC---------EFVRTLNGHKRGIACLQYR--D-RLVVSGSSDNTIRLWDIECGA--CLR 330 (435)
T ss_dssp -TTEEEEEETTSEEEEEETTTC---------CEEEEEECCSSCEEEEEEE--T-TEEEEEETTSCEEEEETTTCC--EEE
T ss_pred -CCEEEEEeCCCeEEEEECCcC---------cEEEEEcCCCCcEEEEEeC--C-CEEEEEeCCCeEEEEECCCCC--EEE
Confidence 348999999999999999986 7788899999999999996 3 799999999999999999987 677
Q ss_pred EecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010748 444 SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 444 ~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~ 483 (502)
.+.+|...|.+++| ++. .|++|+.||.|++||+.++.
T Consensus 331 ~~~~h~~~v~~~~~--~~~-~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 331 VLEGHEELVRCIRF--DNK-RIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp EECCCSSCEEEEEC--CSS-EEEEEETTSCEEEEEHHHHT
T ss_pred EEeCCcCcEEEEEe--cCC-EEEEEeCCCcEEEEECCCCC
Confidence 78899999999999 555 59999999999999997765
No 107
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=6.8e-29 Score=246.15 Aligned_cols=288 Identities=18% Similarity=0.249 Sum_probs=190.6
Q ss_pred CCccccccccccC-CCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEe
Q 010748 137 EDSEDLEDMTINP-NDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 137 ~~~~~v~~~~~~p-~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g 215 (502)
.|...|.++.|+| ++++|++++.++ .+.+|.+.... .. ..........++.|.+. ++++.+|++|
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~---~i~iwd~~~~~-----~~--~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 162 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDK---TLKVWDTNTLQ-----TA--DVFNFEETVYSHHMSPV----STKHCLVAVG 162 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTS---EEEEEETTTTE-----EE--EEEECSSCEEEEEECSS----CSSCCEEEEE
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCC---eEEEeeCCCCc-----cc--eeccCCCceeeeEeecC----CCCCcEEEEE
Confidence 4888999999999 778999998777 44555444322 11 11113344467777543 5578899999
Q ss_pred cCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEe
Q 010748 216 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWD 295 (502)
Q Consensus 216 ~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd 295 (502)
+.+|.|++||+.+... ...+.+|...|.+++|+|++..+|++|+.||.|++||
T Consensus 163 ~~~~~v~~~d~~~~~~---------------------------~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d 215 (408)
T 4a11_B 163 TRGPKVQLCDLKSGSC---------------------------SHILQGHRQEILAVSWSPRYDYILATASADSRVKLWD 215 (408)
T ss_dssp ESSSSEEEEESSSSCC---------------------------CEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred cCCCeEEEEeCCCcce---------------------------eeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEE
Confidence 9999999999975432 2234579999999999999766799999999999999
Q ss_pred CCCCe-eeEee---------------ccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEee----cCCe
Q 010748 296 VAAGK-CNLTL---------------EHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV----AADV 355 (502)
Q Consensus 296 ~~~~~-~~~~~---------------~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~----~~~v 355 (502)
++++. ++..+ ..|...|.+++|+|++ .+|++++.||.|++||+++.......... ....
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 294 (408)
T 4a11_B 216 VRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDG-LHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKG 294 (408)
T ss_dssp TTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSC
T ss_pred CCCCCcccccccccccccceeeccccccccCceeEEEEcCCC-CEEEEecCCCeEEEEECCCCccceecccccccccccc
Confidence 98765 34443 5688999999999998 89999999999999999987654322211 1111
Q ss_pred eEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECC
Q 010748 356 ESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLS 435 (502)
Q Consensus 356 ~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~ 435 (502)
..+.+.......+++++.++.|++||+.+. .++..+.+|...|++++|+|++ .+|++++.||.|++|++.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~---------~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~i~iw~~~ 364 (408)
T 4a11_B 295 LKFTVSCGCSSEFVFVPYGSTIAVYTVYSG---------EQITMLKGHYKTVDCCVFQSNF-QELYSGSRDCNILAWVPS 364 (408)
T ss_dssp CCCEECCSSSSCEEEEEETTEEEEEETTTC---------CEEEEECCCSSCEEEEEEETTT-TEEEEEETTSCEEEEEEC
T ss_pred ceeEEecCCCceEEEEecCCEEEEEECcCC---------cceeeeccCCCeEEEEEEcCCC-CEEEEECCCCeEEEEeCC
Confidence 222233333446777888999999999986 7888999999999999999998 999999999999999999
Q ss_pred CCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010748 436 NNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 436 ~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~ 481 (502)
+.++.. ..... -....+.|.....+++++.++.+++|+...
T Consensus 365 ~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 405 (408)
T 4a11_B 365 LYEPVP--DDDET---TTKSQLNPAFEDAWSSSDEEGGTSAWSHPQ 405 (408)
T ss_dssp C---------------------------------------------
T ss_pred CCCccC--CCCce---EeccccccccceeecccCccCceeecCCcc
Confidence 887422 22211 122344454444567788899999998753
No 108
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-29 Score=246.08 Aligned_cols=233 Identities=6% Similarity=0.028 Sum_probs=181.1
Q ss_pred CCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEE
Q 010748 206 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASA 285 (502)
Q Consensus 206 s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sg 285 (502)
.+++++|++|+.||.|++||+.++..+.. + ....|.++.|+|. +++|
T Consensus 45 ~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~---------------------------~--~~~~v~~~~~~~~----~~s~ 91 (343)
T 3lrv_A 45 YYDKWVCMCRCEDGALHFTQLKDSKTITT---------------------------I--TTPNPRTGGEHPA----IISR 91 (343)
T ss_dssp SEEEEEEEEEEETTEEEEEEESSSSCEEE---------------------------E--EEECCCTTCCCCS----EEEE
T ss_pred cCCCCEEEEECCCCcEEEEECCCCcEEEE---------------------------E--ecCCceeeeeCCc----eEEe
Confidence 46899999999999999999976443221 1 1467888889886 8999
Q ss_pred ecCCcEEEEeCC---------CCeeeEeec-cCCCCeEEEEEcC--CCCcEEEEEeCCCcEEEEecCCCCCccce-Eeec
Q 010748 286 SADKQVKIWDVA---------AGKCNLTLE-HHTDKVQAVAWNH--HSPQILLSGSFDRSVVMKDARISTHSGFK-WAVA 352 (502)
Q Consensus 286 s~dg~v~vwd~~---------~~~~~~~~~-~h~~~v~~l~~~~--~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~ 352 (502)
+.|++|++|+.. +++.+..+. .|...|.+++|+| ++ .+|++++.||+|++||+++++..... ..+.
T Consensus 92 s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~ 170 (343)
T 3lrv_A 92 GPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNT-EYFIWADNRGTIGFQSYEDDSQYIVHSAKSD 170 (343)
T ss_dssp CSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---C-CEEEEEETTCCEEEEESSSSCEEEEECCCSS
T ss_pred cCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCC-CEEEEEeCCCcEEEEECCCCcEEEEEecCCC
Confidence 999999999665 555455543 6778999999999 88 89999999999999999988764433 2345
Q ss_pred CCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccc-eEEec-cCCCeeEEEEcCCCCCEEEEEeCCCcEE
Q 010748 353 ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSS-FTLHA-HDKAVCTISYNPLVPNLLATGSTDKMVK 430 (502)
Q Consensus 353 ~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~-~~~~~-h~~~v~~l~~sp~~~~~l~t~s~dg~i~ 430 (502)
..+.+++|+|++. ++++|+.||.|++||++++ ..+ ..+.. |..+|++++|+|++ .+|++++ ++.|+
T Consensus 171 ~~i~~~~~~pdg~-~lasg~~dg~i~iwd~~~~---------~~~~~~~~~~h~~~v~~l~fs~~g-~~l~s~~-~~~v~ 238 (343)
T 3lrv_A 171 VEYSSGVLHKDSL-LLALYSPDGILDVYNLSSP---------DQASSRFPVDEEAKIKEVKFADNG-YWMVVEC-DQTVV 238 (343)
T ss_dssp CCCCEEEECTTSC-EEEEECTTSCEEEEESSCT---------TSCCEECCCCTTSCEEEEEECTTS-SEEEEEE-SSBEE
T ss_pred CceEEEEECCCCC-EEEEEcCCCEEEEEECCCC---------CCCccEEeccCCCCEEEEEEeCCC-CEEEEEe-CCeEE
Confidence 5799999999865 8999999999999999987 334 66777 99999999999998 8999999 55999
Q ss_pred EEECCCCCeeE-EEEecCCCCcE--EEEEEcCCCCcEEEEEeC-CCcEEEEECCCCccc
Q 010748 431 LWDLSNNQPSC-IASRNPKAGAV--FSVAFSEDSPFVLAIGGS-KGKLEIWDTLSDAGI 485 (502)
Q Consensus 431 vwd~~~~~~~~-~~~~~~~~~~v--~~~~~spd~~~ll~sg~~-dg~i~vwd~~~~~~~ 485 (502)
+||+++.+... +..+..|...+ .+++|+|++++ |++++. ++.|+||++.+....
T Consensus 239 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-l~~~s~~d~~i~v~~~~~~~~~ 296 (343)
T 3lrv_A 239 CFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKN-MIAYSNESNSLTIYKFDKKTKN 296 (343)
T ss_dssp EEETTSSTTCBSSCCCBC-----CCEEEEECTTSSE-EEEEETTTTEEEEEEECTTTCS
T ss_pred EEEcCCCCcceeecccccccccccceEEEECCCCCE-EEEecCCCCcEEEEEEcccccc
Confidence 99999876321 11112233333 46999999995 777777 999999999766543
No 109
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2e-29 Score=251.70 Aligned_cols=264 Identities=9% Similarity=0.064 Sum_probs=198.2
Q ss_pred CccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC
Q 010748 138 DSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM 217 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~ 217 (502)
-...|.+++|+|||++||+|+.++ +++ +.... ..+..|. .. ..++++ +|+| .
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~---TV~----d~~~~--~~l~gh~-~~----v~~V~F-------sPdg-------~ 65 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDI---SIG----QPKYA--KDINCNS-KN----LFHVKE-------FPLE-------F 65 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSE---EEE----EECCC--SCCSSBG-GG----TEEEEE-------ECCC-------C
T ss_pred hhccEEEEEECCCCCEEEEEcCCc---eee----ccccc--ceecCCC-cc----EEEEEE-------CCCC-------C
Confidence 457899999999999999999886 333 22221 1222222 22 245544 6777 4
Q ss_pred CCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeCC
Q 010748 218 EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVA 297 (502)
Q Consensus 218 dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~ 297 (502)
++.+.+|+... .. ...+ .|...|.+++|+|+ +.+||+++.||+|++||..
T Consensus 66 ~~~~~~~~~~~---~~-------------------------~~~~-~~~~~V~~vawSPd-G~~LAs~s~dg~V~iwd~~ 115 (588)
T 2j04_A 66 ENKLDFELAQQ---NG-------------------------LLNS-QPVCYPRVCKPSPI-DDWMAVLSNNGNVSVFKDN 115 (588)
T ss_dssp CCTTTTSCCCS---SC-------------------------SSTT-SCSCCEEEEEECSS-SSCEEEEETTSCEEEEETT
T ss_pred cceEEEEeCCC---ce-------------------------Eeec-CCCCcEEEEEECCC-CCEEEEEeCCCcEEEEeCC
Confidence 55555555431 11 0111 45789999999999 5699999999999999954
Q ss_pred CCeeeEeeccCCC-----CeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCC-------ccce----EeecCCeeEEEeC
Q 010748 298 AGKCNLTLEHHTD-----KVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH-------SGFK----WAVAADVESLAWD 361 (502)
Q Consensus 298 ~~~~~~~~~~h~~-----~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~-------~~~~----~~~~~~v~~v~~~ 361 (502)
. ++..+. |.. .|.+++|+|+| ++|++|+.||+|++||+.++.. .... .+|...|.+++|+
T Consensus 116 ~--~l~~l~-~~~~~~~~sv~svafSPDG-~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawS 191 (588)
T 2j04_A 116 K--MLTNLD-SKGNLSSRTYHCFEWNPIE-SSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWY 191 (588)
T ss_dssp E--EEEECC-CSSCSTTTCEEEEEECSSS-SCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEE
T ss_pred c--eeeecc-CCCccccccEEEEEEcCCC-CEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEc
Confidence 4 667777 665 59999999999 9999999999999999998753 1111 2345789999999
Q ss_pred CCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEE-eccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCee
Q 010748 362 PHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS 440 (502)
Q Consensus 362 ~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~ 440 (502)
|++ +++++.|+.|++|++..... .....++ .+|...|.+++|+ + ..||+++ ++.|++||+.+++.
T Consensus 192 Pdg---Laass~D~tVrlWd~~~~~~------~~~~~tL~~~h~~~V~svaFs--g-~~LASa~-~~tIkLWd~~~~~~- 257 (588)
T 2j04_A 192 EDV---LVAALSNNSVFSMTVSASSH------QPVSRMIQNASRRKITDLKIV--D-YKVVLTC-PGYVHKIDLKNYSI- 257 (588)
T ss_dssp TTE---EEEEETTCCEEEECCCSSSS------CCCEEEEECCCSSCCCCEEEE--T-TEEEEEC-SSEEEEEETTTTEE-
T ss_pred CCc---EEEEeCCCeEEEEECCCCcc------ccceeeecccccCcEEEEEEE--C-CEEEEEe-CCeEEEEECCCCeE-
Confidence 976 78888999999999987621 0123455 4788999999999 5 7888887 69999999998763
Q ss_pred EEEEecCCCCcEEEEEE--cCCCCcEEEEEeCCCcEEEEECC
Q 010748 441 CIASRNPKAGAVFSVAF--SEDSPFVLAIGGSKGKLEIWDTL 480 (502)
Q Consensus 441 ~~~~~~~~~~~v~~~~~--spd~~~ll~sg~~dg~i~vwd~~ 480 (502)
.....+|.+.|..++| +|++. .|++++.+|+ ++|...
T Consensus 258 -~~~~~gh~~~V~~va~~~s~d~~-~La~a~edG~-klw~~d 296 (588)
T 2j04_A 258 -SSLKTGSLENFHIIPLNHEKEST-ILLMSNKTSY-KVLLED 296 (588)
T ss_dssp -EEEECSCCSCCCEEEETTCSSCE-EEEECSSCEE-EEEESS
T ss_pred -EEEEcCCCceEEEEEeeeCCCCC-EEEEEcCCCC-EEEeec
Confidence 2223379999999999 99998 6999999999 999975
No 110
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.9e-29 Score=250.44 Aligned_cols=207 Identities=15% Similarity=0.096 Sum_probs=173.0
Q ss_pred cCcccceeeEEeccCCCcEEEEEecCCcEEEEeCC--CCeeeEeec--cCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEe
Q 010748 263 GSHTDSVLGLAWNKEFRNILASASADKQVKIWDVA--AGKCNLTLE--HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKD 338 (502)
Q Consensus 263 ~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~--~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd 338 (502)
.+|...|++++|+|++..++++|+.||+|+|||+. +++++..+. .|...|++++|+|++ .+|++|+.+|.|++|+
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~~g~v~~~~ 177 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDD-TTVIIADKFGDVYSID 177 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTS-SEEEEEETTSEEEEEE
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCC-CEEEEEeCCCcEEEEe
Confidence 46778999999999965445999999999999999 888888886 567899999999999 8999999999999999
Q ss_pred cCCCCCcc----ceEeecCCeeEEEeCCC--CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceE-EeccCCCeeEEE
Q 010748 339 ARISTHSG----FKWAVAADVESLAWDPH--AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFT-LHAHDKAVCTIS 411 (502)
Q Consensus 339 ~~~~~~~~----~~~~~~~~v~~v~~~~~--~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~-~~~h~~~v~~l~ 411 (502)
+....... ....|...|.+++|+|+ +..++++++.|+.|++||+++. ..+.. +.+|...|++++
T Consensus 178 ~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~---------~~~~~~~~~h~~~v~~~~ 248 (450)
T 2vdu_B 178 INSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC---------FIVDKWLFGHKHFVSSIC 248 (450)
T ss_dssp TTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT---------TCEEEECCCCSSCEEEEE
T ss_pred cCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC---------ceeeeeecCCCCceEEEE
Confidence 98876543 56678899999999997 2348999999999999999876 45555 568999999999
Q ss_pred EcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEec-----------------------CCCCcEEEEEEcCCCCcEEEEE
Q 010748 412 YNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRN-----------------------PKAGAVFSVAFSEDSPFVLAIG 468 (502)
Q Consensus 412 ~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~-----------------------~~~~~v~~~~~spd~~~ll~sg 468 (502)
|+ ++ .+|++++.|+.|++||+.+++........ .....|.+++|+|++++ |+++
T Consensus 249 ~s-d~-~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~-l~~~ 325 (450)
T 2vdu_B 249 CG-KD-YLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPF-VAFF 325 (450)
T ss_dssp EC-ST-TEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSE-EEEE
T ss_pred EC-CC-CEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCE-EEEE
Confidence 99 76 99999999999999999998843333321 22357999999999996 5556
Q ss_pred e-CCCcEEEEEC--CCC
Q 010748 469 G-SKGKLEIWDT--LSD 482 (502)
Q Consensus 469 ~-~dg~i~vwd~--~~~ 482 (502)
+ .++.|+||++ .++
T Consensus 326 ~~~d~~i~iw~~~~~~~ 342 (450)
T 2vdu_B 326 VEATKCIIILEMSEKQK 342 (450)
T ss_dssp ETTCSEEEEEEECSSST
T ss_pred ECCCCeEEEEEeccCCC
Confidence 6 8999999999 554
No 111
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.1e-29 Score=241.05 Aligned_cols=282 Identities=9% Similarity=0.040 Sum_probs=198.9
Q ss_pred ccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCCcEE
Q 010748 143 EDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIE 222 (502)
Q Consensus 143 ~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~dg~I~ 222 (502)
....+.+++++|++|+.++ .+++|.+.... .+..... ....++.| +|. +++|+.|+.|+
T Consensus 40 ~~~~~~~d~~~l~sg~~Dg---~v~iwd~~~~~----~~~~~~~----~~v~~~~~-------~~~---~~s~s~D~~i~ 98 (343)
T 3lrv_A 40 LNKSMYYDKWVCMCRCEDG---ALHFTQLKDSK----TITTITT----PNPRTGGE-------HPA---IISRGPCNRLL 98 (343)
T ss_dssp ECSSSSEEEEEEEEEEETT---EEEEEEESSSS----CEEEEEE----ECCCTTCC-------CCS---EEEECSTTEEE
T ss_pred hhhhhcCCCCEEEEECCCC---cEEEEECCCCc----EEEEEec----CCceeeee-------CCc---eEEecCCCeEE
Confidence 3446678899999999998 55666665443 2222221 11223333 565 99999999999
Q ss_pred EeeCCCCCCcCcceecCCcchhhhhhccccCCccc-ccccccCcccceeeEEecc--CCCcEEEEEecCCcEEEEeCCCC
Q 010748 223 IWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSS-IKYKKGSHTDSVLGLAWNK--EFRNILASASADKQVKIWDVAAG 299 (502)
Q Consensus 223 iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~V~~l~~~~--~~~~~l~sgs~dg~v~vwd~~~~ 299 (502)
+|+......... ..... ......+|...|.+++|+| + +.+|++|+.||+|++||+.++
T Consensus 99 ~w~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~l~s~s~dg~i~~wd~~~~ 159 (343)
T 3lrv_A 99 LLYPGNQITILD------------------SKTNKVLREIEVDSANEIIYMYGHNEVN-TEYFIWADNRGTIGFQSYEDD 159 (343)
T ss_dssp EEETTTEEEEEE------------------TTTCCEEEEEECCCSSCEEEEECCC----CCEEEEEETTCCEEEEESSSS
T ss_pred EEEccCceEEee------------------cCCcceeEEeecCCCCCEEEEEcCCCCC-CCEEEEEeCCCcEEEEECCCC
Confidence 999863110000 00011 1222336778999999999 8 569999999999999999999
Q ss_pred eeeEeec-cCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCc-cceEe-ecCCeeEEEeCCCCCCEEEEEeCCCc
Q 010748 300 KCNLTLE-HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS-GFKWA-VAADVESLAWDPHAEHSFVVSLEDGT 376 (502)
Q Consensus 300 ~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~-~~~~~-~~~~v~~v~~~~~~~~~~~~~~~dg~ 376 (502)
+++..+. .|...|++++|+|++ .+|++|+.||.|++||++++... ..... |...|.+++|+|++. ++++++ ++.
T Consensus 160 ~~~~~~~~~~~~~i~~~~~~pdg-~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~-~l~s~~-~~~ 236 (343)
T 3lrv_A 160 SQYIVHSAKSDVEYSSGVLHKDS-LLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGY-WMVVEC-DQT 236 (343)
T ss_dssp CEEEEECCCSSCCCCEEEECTTS-CEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSS-EEEEEE-SSB
T ss_pred cEEEEEecCCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCC-EEEEEe-CCe
Confidence 9877663 456689999999999 89999999999999999998876 33444 789999999999865 788888 559
Q ss_pred EEEEECCCCCCCCCCCCCccceEEeccCCCee--EEEEcCCCCCEEEEEeC-CCcEEEEECCCCCeeEEEEecCCCCcEE
Q 010748 377 IKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC--TISYNPLVPNLLATGST-DKMVKLWDLSNNQPSCIASRNPKAGAVF 453 (502)
Q Consensus 377 v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~--~l~~sp~~~~~l~t~s~-dg~i~vwd~~~~~~~~~~~~~~~~~~v~ 453 (502)
|++||+++.... ..+..+..|...+. +++|+|++ .+|++++. |+.|+||++....... .. .++.
T Consensus 237 v~iwd~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~g-~~l~~~s~~d~~i~v~~~~~~~~~~--~~----~~~~ 303 (343)
T 3lrv_A 237 VVCFDLRKDVGT------LAYPTYTIPEFKTGTVTYDIDDSG-KNMIAYSNESNSLTIYKFDKKTKNW--TK----DEES 303 (343)
T ss_dssp EEEEETTSSTTC------BSSCCCBC-----CCEEEEECTTS-SEEEEEETTTTEEEEEEECTTTCSE--EE----EEEE
T ss_pred EEEEEcCCCCcc------eeecccccccccccceEEEECCCC-CEEEEecCCCCcEEEEEEcccccce--Ee----cCce
Confidence 999999987321 11222222444444 69999998 89999888 9999999997654221 11 5678
Q ss_pred EEEEcC---CCCcEEEEEeCCCcEEEEECCC
Q 010748 454 SVAFSE---DSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 454 ~~~~sp---d~~~ll~sg~~dg~i~vwd~~~ 481 (502)
.++|.| +... |++++.+|.+.++-...
T Consensus 304 ~~~~~~~~~~~~~-l~~~~~d~~~~~~~~~~ 333 (343)
T 3lrv_A 304 ALCLQSDTADFTD-MDVVCGDGGIAAILKTN 333 (343)
T ss_dssp ECCC----CCCCE-EEEEEETTEEEEEEECS
T ss_pred eEecCccccccce-eEEEecCCceEEEEecC
Confidence 888988 7774 88888899998886443
No 112
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=8.3e-29 Score=241.84 Aligned_cols=251 Identities=19% Similarity=0.308 Sum_probs=197.2
Q ss_pred cceeeeecCCCCCCCC---CCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccce
Q 010748 193 PLCMAWLDCPLKDREK---GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSV 269 (502)
Q Consensus 193 ~~~~~~~~~~~~~s~~---~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V 269 (502)
..|++| +|+ |++|++|+.||.|+||++.+.. ......+.+|...|
T Consensus 42 v~~~~~-------~~~~~~g~~l~~~~~dg~i~iw~~~~~~-------------------------~~~~~~~~~h~~~v 89 (368)
T 3mmy_A 42 IGCLSF-------SPPTLPGNFLIAGSWANDVRCWEVQDSG-------------------------QTIPKAQQMHTGPV 89 (368)
T ss_dssp EEEEEE-------CCTTSSSEEEEEEETTSEEEEEEECTTS-------------------------CEEEEEEEECSSCE
T ss_pred eEEEEE-------cCCCCCceEEEEECCCCcEEEEEcCCCC-------------------------ceeEEEeccccCCE
Confidence 378888 677 6999999999999999997521 11223455799999
Q ss_pred eeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEE--cCCCCcEEEEEeCCCcEEEEecCCCCCccc
Q 010748 270 LGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAW--NHHSPQILLSGSFDRSVVMKDARISTHSGF 347 (502)
Q Consensus 270 ~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~--~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~ 347 (502)
++++|+|+ +.+|++|+.||.|++||+.+++++. +..|...|++++| +|++ .+|++++.||.|++||+++.+...
T Consensus 90 ~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~- 165 (368)
T 3mmy_A 90 LDVCWSDD-GSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNY-SCVMTGSWDKTLKFWDTRSSNPMM- 165 (368)
T ss_dssp EEEEECTT-SSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSC-EEEEEEETTSEEEEECSSCSSCSE-
T ss_pred EEEEECcC-CCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCC-CEEEEccCCCcEEEEECCCCcEEE-
Confidence 99999998 6699999999999999999998776 4569999999999 8888 899999999999999999887665
Q ss_pred eEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEE-eccCCCeeEEEEcCCC---CCEEEEE
Q 010748 348 KWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLV---PNLLATG 423 (502)
Q Consensus 348 ~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~---~~~l~t~ 423 (502)
.......+.++.+.+ . .+++++.++.+++|+++... ...... ..+...+.++.+.+.. +..++++
T Consensus 166 ~~~~~~~~~~~~~~~--~-~~~~~~~~~~i~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (368)
T 3mmy_A 166 VLQLPERCYCADVIY--P-MAVVATAERGLIVYQLENQP--------SEFRRIESPLKHQHRCVAIFKDKQNKPTGFALG 234 (368)
T ss_dssp EEECSSCEEEEEEET--T-EEEEEEGGGCEEEEECSSSC--------EEEEECCCSCSSCEEEEEEEECTTSCEEEEEEE
T ss_pred EEecCCCceEEEecC--C-eeEEEeCCCcEEEEEecccc--------chhhhccccccCCCceEEEcccCCCCCCeEEEe
Confidence 444556777777765 2 78888999999999998762 222222 2234455666665543 1239999
Q ss_pred eCCCcEEEEECCCCCe-eEEEEecCCCC------------cEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccccc
Q 010748 424 STDKMVKLWDLSNNQP-SCIASRNPKAG------------AVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFS 490 (502)
Q Consensus 424 s~dg~i~vwd~~~~~~-~~~~~~~~~~~------------~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~~ 490 (502)
+.||.|++|++..... ..+..+..|.. +|++++|+|++.+ |++|+.||.|+|||+.+++++.....
T Consensus 235 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~ 313 (368)
T 3mmy_A 235 SIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGT-LATVGSDGRFSFWDKDARTKLKTSEQ 313 (368)
T ss_dssp ETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCC-EEEEETTSCEEEEETTTTEEEEECCC
T ss_pred cCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCE-EEEEccCCeEEEEECCCCcEEEEecC
Confidence 9999999999998743 34455556654 7999999999995 89999999999999999888776554
Q ss_pred C
Q 010748 491 K 491 (502)
Q Consensus 491 ~ 491 (502)
+
T Consensus 314 ~ 314 (368)
T 3mmy_A 314 L 314 (368)
T ss_dssp C
T ss_pred C
Confidence 4
No 113
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.5e-29 Score=243.34 Aligned_cols=213 Identities=24% Similarity=0.366 Sum_probs=184.1
Q ss_pred cccCcccceeeEEeccCCCcEEEEEecCCcEEEEeCC--CCeeeEeeccCCCCeEEEEEcCC--CCcEEEEEeCCCcEEE
Q 010748 261 KKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVA--AGKCNLTLEHHTDKVQAVAWNHH--SPQILLSGSFDRSVVM 336 (502)
Q Consensus 261 ~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~--~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~s~s~dg~i~i 336 (502)
.+.+|...|++++|+|+ +.+|++|+.||.|+||++. +++.+..+.+|...|++++|++. + .+|++|+.||.|++
T Consensus 6 ~~~~h~~~v~~~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~~l~s~~~dg~v~i 83 (379)
T 3jrp_A 6 IANAHNELIHDAVLDYY-GKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVLI 83 (379)
T ss_dssp CEEECCCCEEEEEECSS-SSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSCEEE
T ss_pred EecCCcccEEEEEEcCC-CCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCC-CEEEEeccCCEEEE
Confidence 45689999999999999 5699999999999999998 66788889999999999999877 6 89999999999999
Q ss_pred EecCCCC--CccceEeecCCeeEEEeCCCC-CCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEc
Q 010748 337 KDARIST--HSGFKWAVAADVESLAWDPHA-EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYN 413 (502)
Q Consensus 337 wd~~~~~--~~~~~~~~~~~v~~v~~~~~~-~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 413 (502)
||+++.. .......+...|.+++|+|+. ..++++++.+|.|++||++.... .....+..|...|++++|+
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~-------~~~~~~~~~~~~v~~~~~~ 156 (379)
T 3jrp_A 84 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT-------TSPIIIDAHAIGVNSASWA 156 (379)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC-------CCEEEEECCTTCEEEEEEC
T ss_pred EEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc-------eeeEEecCCCCceEEEEEc
Confidence 9999876 344344578899999999972 34899999999999999987632 4456678899999999999
Q ss_pred CC------------CCCEEEEEeCCCcEEEEECCCCCe--eEEEEecCCCCcEEEEEEcCC---CCcEEEEEeCCCcEEE
Q 010748 414 PL------------VPNLLATGSTDKMVKLWDLSNNQP--SCIASRNPKAGAVFSVAFSED---SPFVLAIGGSKGKLEI 476 (502)
Q Consensus 414 p~------------~~~~l~t~s~dg~i~vwd~~~~~~--~~~~~~~~~~~~v~~~~~spd---~~~ll~sg~~dg~i~v 476 (502)
|. .+.+|++++.||.|++||+++... .....+..|...|.+++|+|+ +. +|++++.||.|+|
T Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~dg~i~i 235 (379)
T 3jrp_A 157 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS-YLASVSQDRTCII 235 (379)
T ss_dssp CCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE-EEEEEETTSCEEE
T ss_pred CccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCC-eEEEEeCCCEEEE
Confidence 94 238999999999999999987653 355677889999999999999 66 6999999999999
Q ss_pred EECCCCc
Q 010748 477 WDTLSDA 483 (502)
Q Consensus 477 wd~~~~~ 483 (502)
||+.++.
T Consensus 236 wd~~~~~ 242 (379)
T 3jrp_A 236 WTQDNEQ 242 (379)
T ss_dssp EEESSTT
T ss_pred EeCCCCC
Confidence 9998864
No 114
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=4.5e-28 Score=239.47 Aligned_cols=279 Identities=13% Similarity=0.116 Sum_probs=208.0
Q ss_pred ceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEE-EEecCCCcEEEeeCCCCC
Q 010748 152 AVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFM-AVGSMEPAIEIWDLDVID 230 (502)
Q Consensus 152 ~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l-a~g~~dg~I~iwdl~~~~ 230 (502)
.++++++.++ .|++|+...........+| ..+.+++| +|++++| ++++.++.|++||+.+++
T Consensus 3 ~l~vs~~~d~-----~v~v~d~~~~~~~~~~~~~-----~~~~~~~~-------s~dg~~l~~~~~~d~~i~v~d~~~~~ 65 (391)
T 1l0q_A 3 FAYIANSESD-----NISVIDVTSNKVTATIPVG-----SNPMGAVI-------SPDGTKVYVANAHSNDVSIIDTATNN 65 (391)
T ss_dssp EEEEEETTTT-----EEEEEETTTTEEEEEEECS-----SSEEEEEE-------CTTSSEEEEEEGGGTEEEEEETTTTE
T ss_pred EEEEEcCCCC-----EEEEEECCCCeEEEEeecC-----CCcceEEE-------CCCCCEEEEECCCCCeEEEEECCCCe
Confidence 3566666665 5555554443111111222 33567777 7899876 677789999999997543
Q ss_pred CcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCC
Q 010748 231 EVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTD 310 (502)
Q Consensus 231 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~ 310 (502)
... .+..| ..+.+++|+|++..++++++.++.|++||+.+++.+..+..| .
T Consensus 66 ~~~---------------------------~~~~~-~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~ 116 (391)
T 1l0q_A 66 VIA---------------------------TVPAG-SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-K 116 (391)
T ss_dssp EEE---------------------------EEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-S
T ss_pred EEE---------------------------EEECC-CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-C
Confidence 221 11123 389999999996655567777899999999999998888754 5
Q ss_pred CeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCC
Q 010748 311 KVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPD 390 (502)
Q Consensus 311 ~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~ 390 (502)
.+.+++|+|++..++++++.++.|++||+++++... .......+.+++|+|++..++++++.++.|++||+++.
T Consensus 117 ~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~-~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~----- 190 (391)
T 1l0q_A 117 SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVIN-TVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN----- 190 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE-EEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT-----
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE-EEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC-----
Confidence 789999999994455788889999999999876554 34445678999999998766678888999999999876
Q ss_pred CCCCccceEEeccCCCeeEEEEcCCCCCEEEEEe---CCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEE
Q 010748 391 STSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS---TDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAI 467 (502)
Q Consensus 391 ~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s---~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~s 467 (502)
.....+. +...+.+++|+|++ .+|++++ .++.|++||+.+++. +..+..+. .+.+++|+|++++++++
T Consensus 191 ----~~~~~~~-~~~~~~~~~~~~~g-~~l~~~~~~~~~~~v~~~d~~~~~~--~~~~~~~~-~~~~~~~s~dg~~l~~s 261 (391)
T 1l0q_A 191 ----SVIDTVK-VEAAPSGIAVNPEG-TKAYVTNVDKYFNTVSMIDTGTNKI--TARIPVGP-DPAGIAVTPDGKKVYVA 261 (391)
T ss_dssp ----EEEEEEE-CSSEEEEEEECTTS-SEEEEEEECSSCCEEEEEETTTTEE--EEEEECCS-SEEEEEECTTSSEEEEE
T ss_pred ----eEEEEEe-cCCCccceEECCCC-CEEEEEecCcCCCcEEEEECCCCeE--EEEEecCC-CccEEEEccCCCEEEEE
Confidence 4444443 56678999999998 6777766 789999999998873 44455453 58899999999976688
Q ss_pred EeCCCcEEEEECCCCccccccccC
Q 010748 468 GGSKGKLEIWDTLSDAGISNRFSK 491 (502)
Q Consensus 468 g~~dg~i~vwd~~~~~~~~~~~~~ 491 (502)
++.++.|++||+.+++.+.....+
T Consensus 262 ~~~d~~v~v~d~~~~~~~~~~~~~ 285 (391)
T 1l0q_A 262 LSFXNTVSVIDTATNTITATMAVG 285 (391)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECS
T ss_pred cCCCCEEEEEECCCCcEEEEEECC
Confidence 889999999999998877655433
No 115
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.1e-28 Score=268.44 Aligned_cols=238 Identities=17% Similarity=0.196 Sum_probs=192.9
Q ss_pred CcceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceee
Q 010748 192 FPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLG 271 (502)
Q Consensus 192 ~~~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 271 (502)
...|++| +|++++||+|+.||.|+||+....... ....|...|.+
T Consensus 19 ~V~~laf-------spdg~~lAsgs~Dg~I~lw~~~~~~~~----------------------------~~~~~~~~V~~ 63 (902)
T 2oaj_A 19 KPIAAAF-------DFTQNLLAIATVTGEVHIYGQQQVEVV----------------------------IKLEDRSAIKE 63 (902)
T ss_dssp CEEEEEE-------ETTTTEEEEEETTSEEEEECSTTCEEE----------------------------EECSSCCCEEE
T ss_pred CcEEEEE-------CCCCCEEEEEeCCCEEEEEeCCCcEEE----------------------------EEcCCCCCEEE
Confidence 3467777 799999999999999999997642211 11247889999
Q ss_pred EEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCc------
Q 010748 272 LAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS------ 345 (502)
Q Consensus 272 l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~------ 345 (502)
|+|+| +. +|++++.|++|+|||+.+++++..+. |...|++++|+|++ .+|++|+.||.|++||+++....
T Consensus 64 l~fsp-g~-~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g-~~l~sgs~dg~V~lwd~~~~~~~~~~i~~ 139 (902)
T 2oaj_A 64 MRFVK-GI-YLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASL-DWMLIGLQNGSMIVYDIDRDQLSSFKLDN 139 (902)
T ss_dssp EEEET-TT-EEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTC-SEEEEEETTSCEEEEETTTTEEEEEEECC
T ss_pred EEEcC-CC-EEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCC-CEEEEEcCCCcEEEEECCCCccccceecc
Confidence 99999 45 99999999999999999999998886 67899999999999 89999999999999999876642
Q ss_pred -----cceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEecc-----------------
Q 010748 346 -----GFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH----------------- 403 (502)
Q Consensus 346 -----~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h----------------- 403 (502)
.....|.+.|.+++|+|++...+++|+.+|.| +||+++. .++..+..|
T Consensus 140 ~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~---------~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (902)
T 2oaj_A 140 LQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVEN---------EIKQSFIYELPPFAPGGDFSEKTNEK 209 (902)
T ss_dssp HHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTT---------EEEEEECCCBCTTCCCSTTCCCTTSC
T ss_pred ccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCC---------ceEEEEecccCCcCCCcccccccccc
Confidence 11234678899999999766689999999999 9999986 455555544
Q ss_pred -CCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEec----------------CCCCcEEEEEEc----CCCC
Q 010748 404 -DKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRN----------------PKAGAVFSVAFS----EDSP 462 (502)
Q Consensus 404 -~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~----------------~~~~~v~~~~~s----pd~~ 462 (502)
...|++++|+|++ .+|++|+.||.|++||++++++.....+. .|..+|++++|+ |++.
T Consensus 210 h~~~V~~v~fspdg-~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~ 288 (902)
T 2oaj_A 210 RTPKVIQSLYHPNS-LHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYT 288 (902)
T ss_dssp BCCCEEEEEECTTS-SEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEE
T ss_pred cCCCeEEEEEcCCC-CEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCC
Confidence 5789999999998 99999999999999999998753332221 134579999995 5554
Q ss_pred cEEEEEeCC-----CcEEEEEC
Q 010748 463 FVLAIGGSK-----GKLEIWDT 479 (502)
Q Consensus 463 ~ll~sg~~d-----g~i~vwd~ 479 (502)
.+|++|+.+ ..+.+|++
T Consensus 289 ~ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 289 SLLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp EEEEEEECSTTSSCCCEEEEEE
T ss_pred EEEEeCCCCCCCCCceEEEEec
Confidence 578888776 37999985
No 116
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1e-29 Score=272.51 Aligned_cols=257 Identities=16% Similarity=0.226 Sum_probs=199.0
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCC--CCEEE
Q 010748 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREK--GNFMA 213 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~--~~~la 213 (502)
..|...|.+++|+|++++|++|+.++ .+.||.+..........+..| .....|+.| +++ +++|+
T Consensus 6 ~gH~~~V~~l~~s~dg~~latg~~dg---~I~vwd~~~~~~~~~~~l~~h----~~~V~~l~~-------s~~~~~~~l~ 71 (753)
T 3jro_A 6 NAHNELIHDAVLDYYGKRLATCSSDK---TIKIFEVEGETHKLIDTLTGH----EGPVWRVDW-------AHPKFGTILA 71 (753)
T ss_dssp --CCCCEEEECCCSSSCCEEEEETTT---EEEEEEEETTEEEEEEEECCC----SSCEEEEEE-------CCTTSCSEEE
T ss_pred ccCcceeEEEEECCCCCeEEEEECCC---cEEEEecCCCCCccceeccCC----cCceEEEEe-------cCCCCCCEEE
Confidence 45889999999999999999999887 667777763322111111122 233467777 555 99999
Q ss_pred EecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCC-CcEEEEEecCCcEE
Q 010748 214 VGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEF-RNILASASADKQVK 292 (502)
Q Consensus 214 ~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~-~~~l~sgs~dg~v~ 292 (502)
+|+.||.|++||+.++. ......+.+|...|++++|+|+. +.+|++|+.||+|+
T Consensus 72 s~s~Dg~I~vwd~~~~~-------------------------~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~ 126 (753)
T 3jro_A 72 SCSYDGKVLIWKEENGR-------------------------WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVS 126 (753)
T ss_dssp EEETTSCEEEEEEETTE-------------------------EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEE
T ss_pred EEeCCCeEEEEECCCCc-------------------------ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEE
Confidence 99999999999987532 11223445799999999999983 45999999999999
Q ss_pred EEeCCCCe--eeEeeccCCCCeEEEEEcCC------------CCcEEEEEeCCCcEEEEecCCCCCc----cceEeecCC
Q 010748 293 IWDVAAGK--CNLTLEHHTDKVQAVAWNHH------------SPQILLSGSFDRSVVMKDARISTHS----GFKWAVAAD 354 (502)
Q Consensus 293 vwd~~~~~--~~~~~~~h~~~v~~l~~~~~------------~~~~l~s~s~dg~i~iwd~~~~~~~----~~~~~~~~~ 354 (502)
+||+.++. ....+.+|...|.+++|+|. ++.+|++|+.||.|++||+++.... .....|...
T Consensus 127 vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~ 206 (753)
T 3jro_A 127 VVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW 206 (753)
T ss_dssp EEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC
T ss_pred EEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCc
Confidence 99998873 44566789999999999995 2389999999999999999987532 223457889
Q ss_pred eeEEEeCCCC--CCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEE
Q 010748 355 VESLAWDPHA--EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 432 (502)
Q Consensus 355 v~~v~~~~~~--~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vw 432 (502)
|.+++|+|++ +.++++++.||.|++||+++..... .........|...|++++|+|++ .+|++|+.||.|++|
T Consensus 207 V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~----~~~~~~~~~~~~~v~~l~~spdg-~~l~s~s~Dg~I~vw 281 (753)
T 3jro_A 207 VRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPW----KKTLLKEEKFPDVLWRASWSLSG-NVLALSGGDNKVTLW 281 (753)
T ss_dssp EEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCC----BCCBSSSSCCSSCCCCEEECTTT-CCEEEECSSSCEECC
T ss_pred EEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcc----eeEEeccCCCCCceEEEEEcCCC-CEEEEEcCCCEEEEE
Confidence 9999999984 4589999999999999999863211 12333445688999999999998 899999999999999
Q ss_pred ECCC
Q 010748 433 DLSN 436 (502)
Q Consensus 433 d~~~ 436 (502)
++..
T Consensus 282 d~~~ 285 (753)
T 3jro_A 282 KENL 285 (753)
T ss_dssp BCCS
T ss_pred ecCC
Confidence 9974
No 117
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=1.9e-27 Score=227.68 Aligned_cols=252 Identities=21% Similarity=0.371 Sum_probs=203.0
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEE
Q 010748 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.|++| |+++ +||+|. |++|+|||+.+++.+.. ..+.+|...|++++
T Consensus 29 ~~l~W-------S~~~-~lAvg~-D~tV~iWd~~tg~~~~~-------------------------~~~~~~~~~V~~v~ 74 (318)
T 4ggc_A 29 NLVDW-------SSGN-VLAVAL-DNSVYLWSASSGDILQL-------------------------LQMEQPGEYISSVA 74 (318)
T ss_dssp BCEEE-------CTTS-EEEEEE-TTEEEEEETTTCCEEEE-------------------------EECCSTTCCEEEEE
T ss_pred eEEEE-------CCCC-EEEEEe-CCEEEEEECCCCCEEEE-------------------------EEecCCCCeEEEEE
Confidence 46777 6664 788775 89999999987543321 12347889999999
Q ss_pred eccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCc-cceEeec
Q 010748 274 WNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS-GFKWAVA 352 (502)
Q Consensus 274 ~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~-~~~~~~~ 352 (502)
|+|+ +++|++|+.||+|++|++.+++++..+.+|...+.++.+.+ .++++++.++.+++|+....... .....|.
T Consensus 75 ~~~~-~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~---~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (318)
T 4ggc_A 75 WIKE-GNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHS 150 (318)
T ss_dssp ECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCS
T ss_pred ECCC-CCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCC---CEEEEEecCCceEeeecCCCceeEEEEcCcc
Confidence 9999 56999999999999999999999999999999998877754 68999999999999999876554 3345678
Q ss_pred CCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEE--EEeCCCcEE
Q 010748 353 ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLA--TGSTDKMVK 430 (502)
Q Consensus 353 ~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~--t~s~dg~i~ 430 (502)
..+.++.|.+.+. ++++++.||.|++||++++... .........|.+.|.++.++|.++.+++ +++.++.|+
T Consensus 151 ~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~ 224 (318)
T 4ggc_A 151 QEVCGLRWAPDGR-HLASGGNDNLVNVWPSAPGEGG-----WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIR 224 (318)
T ss_dssp SCEEEEEECTTSS-EEEEEETTSCEEEEESSCBTTB-----SCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEE
T ss_pred CceEEEEEcCCCC-EEEEEecCcceeEEECCCCccc-----ccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEE
Confidence 8999999999865 8999999999999999876321 2345667778899999999998766654 456789999
Q ss_pred EEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEE-eCCCcEEEEECCCCccccccccCC
Q 010748 431 LWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG-GSKGKLEIWDTLSDAGISNRFSKY 492 (502)
Q Consensus 431 vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg-~~dg~i~vwd~~~~~~~~~~~~~~ 492 (502)
+||...... . ....+...+..+.|+|++.++++++ +.|+.|+|||+.+++++..+.+|.
T Consensus 225 lwd~~~~~~--~-~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~ 284 (318)
T 4ggc_A 225 IWNVCSGAC--L-SAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHT 284 (318)
T ss_dssp EEETTTCCE--E-EEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCS
T ss_pred EEecccccc--c-ccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCC
Confidence 999988873 2 2334567799999999998655433 478999999999999988776654
No 118
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=7.1e-28 Score=241.43 Aligned_cols=283 Identities=8% Similarity=0.037 Sum_probs=210.7
Q ss_pred cccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeee-e--c-cccCCCcceeeeecCCCCCCCCCCEEEEe
Q 010748 140 EDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVH-H--H-IIIPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~-~--~-~~~~~~~~~~~~~~~~~~~s~~~~~la~g 215 (502)
..+.++.|+|++.++++++.++ .+.+ |+...+ .+... . . ........++.| ++++++++++
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~---~i~~--~d~~~g---~~~~~~~~~~~~~~~~~v~~~~~-------~~~~~~~~s~ 187 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDE---GMDV--LDINSG---QTVRLSPPEKYKKKLGFVETISI-------PEHNELWVSQ 187 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSS---SEEE--EETTTC---CEEEECCCHHHHTTCCEEEEEEE-------GGGTEEEEEE
T ss_pred CCceEEEEeCCCeEEEEeCCCC---eEEE--EECCCC---eEeeecCcccccccCCceeEEEE-------cCCCEEEEEE
Confidence 4567999999666666665554 3444 444433 22110 0 0 001112345666 6889999999
Q ss_pred cCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEe
Q 010748 216 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWD 295 (502)
Q Consensus 216 ~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd 295 (502)
+.++.|++||+.+.... ..+..|...+.+++|+|++..++++++.++.|++||
T Consensus 188 ~~d~~v~~~d~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d 240 (433)
T 3bws_A 188 MQANAVHVFDLKTLAYK---------------------------ATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVID 240 (433)
T ss_dssp GGGTEEEEEETTTCCEE---------------------------EEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEECCCceEE---------------------------EEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEE
Confidence 99999999999753321 223368889999999999665556777899999999
Q ss_pred CCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEe--------CCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCE
Q 010748 296 VAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGS--------FDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHS 367 (502)
Q Consensus 296 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s--------~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~ 367 (502)
+.+++.+..+..+ ..+.+++|+|++ .+|++++ .||.|++||+++++... ...+...+.+++|+|++..+
T Consensus 241 ~~~~~~~~~~~~~-~~~~~~~~~~~g-~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~g~~l 317 (433)
T 3bws_A 241 RKTKLEIRKTDKI-GLPRGLLLSKDG-KELYIAQFSASNQESGGGRLGIYSMDKEKLID-TIGPPGNKRHIVSGNTENKI 317 (433)
T ss_dssp TTTTEEEEECCCC-SEEEEEEECTTS-SEEEEEEEESCTTCSCCEEEEEEETTTTEEEE-EEEEEECEEEEEECSSTTEE
T ss_pred CCCCcEEEEecCC-CCceEEEEcCCC-CEEEEEECCCCccccCCCeEEEEECCCCcEEe-eccCCCCcceEEECCCCCEE
Confidence 9999998888754 569999999999 7777777 58899999999876544 44566789999999998767
Q ss_pred EEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeC---------------CCcEEEE
Q 010748 368 FVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST---------------DKMVKLW 432 (502)
Q Consensus 368 ~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~---------------dg~i~vw 432 (502)
+++++.++.|++||+.+. ..+..+. +...+.+++|+|++ .+|++++. ||.|++|
T Consensus 318 ~~~~~~~~~v~v~d~~~~---------~~~~~~~-~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~ 386 (433)
T 3bws_A 318 YVSDMCCSKIEVYDLKEK---------KVQKSIP-VFDKPNTIALSPDG-KYLYVSCRGPNHPTEGYLKKGLVLGKVYVI 386 (433)
T ss_dssp EEEETTTTEEEEEETTTT---------EEEEEEE-CSSSEEEEEECTTS-SEEEEEECCCCCTTTCTTSCCSSCCEEEEE
T ss_pred EEEecCCCEEEEEECCCC---------cEEEEec-CCCCCCeEEEcCCC-CEEEEEecCCCccccccccccccceEEEEE
Confidence 788899999999999875 4555554 67889999999998 77777766 5799999
Q ss_pred ECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010748 433 DLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 433 d~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~ 481 (502)
|+.+++. +..+.. ...+.+++|+|++++++++++.++.|++|++..
T Consensus 387 d~~~~~~--~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 387 DTTTDTV--KEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp ETTTTEE--EEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred ECCCCcE--EEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 9998874 334443 457999999999996444444599999999863
No 119
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=1.3e-27 Score=239.59 Aligned_cols=301 Identities=11% Similarity=0.072 Sum_probs=223.4
Q ss_pred cccccccc---ccCCCceEEEEEecCCc-----------ceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCC
Q 010748 139 SEDLEDMT---INPNDAVIVCARNEDDV-----------SHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLK 204 (502)
Q Consensus 139 ~~~v~~~~---~~p~~~~l~~~~~~~~~-----------~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 204 (502)
...+..+. |+|+++.+++++..... ..+.||.++.... .+...........+.+++|
T Consensus 60 ~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~---~~~~~~~~~~~~~~~~~~~------ 130 (433)
T 3bws_A 60 NIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGI---THRFISRFKTGFQPKSVRF------ 130 (433)
T ss_dssp TEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTC---SEEEEEEEECSSCBCCCEE------
T ss_pred CCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCC---cceEEEEEcCCCCceEEEE------
Confidence 34567777 88988877766543321 1126666665433 3333333334455667766
Q ss_pred CCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEE
Q 010748 205 DREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 284 (502)
Q Consensus 205 ~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~s 284 (502)
+|++.++++++.++.|++||+.++..... .....+.+|...|.+++|+++ +.++++
T Consensus 131 -s~~~~~~~~~~~~~~i~~~d~~~g~~~~~----------------------~~~~~~~~~~~~v~~~~~~~~-~~~~~s 186 (433)
T 3bws_A 131 -IDNTRLAIPLLEDEGMDVLDINSGQTVRL----------------------SPPEKYKKKLGFVETISIPEH-NELWVS 186 (433)
T ss_dssp -SSSSEEEEEBTTSSSEEEEETTTCCEEEE----------------------CCCHHHHTTCCEEEEEEEGGG-TEEEEE
T ss_pred -eCCCeEEEEeCCCCeEEEEECCCCeEeee----------------------cCcccccccCCceeEEEEcCC-CEEEEE
Confidence 67788889999999999999986543211 011123478899999999998 669999
Q ss_pred EecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCC
Q 010748 285 ASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHA 364 (502)
Q Consensus 285 gs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~ 364 (502)
++.|+.|++||+.+++.+..+..|...+.+++|+|++..++++++.++.|++||+++++... .......+.+++|+|++
T Consensus 187 ~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~g 265 (433)
T 3bws_A 187 QMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR-KTDKIGLPRGLLLSKDG 265 (433)
T ss_dssp EGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-ECCCCSEEEEEEECTTS
T ss_pred ECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE-EecCCCCceEEEEcCCC
Confidence 99999999999999999999988999999999999994444666689999999998776543 33345569999999987
Q ss_pred CCEEEEEe--------CCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCC
Q 010748 365 EHSFVVSL--------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN 436 (502)
Q Consensus 365 ~~~~~~~~--------~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~ 436 (502)
. .+++++ .+|.|++||++++ ..+.. ..|...+.+++|+|++..++++++.++.|++||+.+
T Consensus 266 ~-~l~~~~~~~~~~~~~dg~i~~~d~~~~---------~~~~~-~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~ 334 (433)
T 3bws_A 266 K-ELYIAQFSASNQESGGGRLGIYSMDKE---------KLIDT-IGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKE 334 (433)
T ss_dssp S-EEEEEEEESCTTCSCCEEEEEEETTTT---------EEEEE-EEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTT
T ss_pred C-EEEEEECCCCccccCCCeEEEEECCCC---------cEEee-ccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCC
Confidence 6 566655 5889999999875 33333 345668999999999855778889999999999998
Q ss_pred CCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeC---------------CCcEEEEECCCCcccccc
Q 010748 437 NQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGS---------------KGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 437 ~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~---------------dg~i~vwd~~~~~~~~~~ 488 (502)
++. +..+. +...+.+++|+|++++ |++++. ||.|++||+.+++.+...
T Consensus 335 ~~~--~~~~~-~~~~~~~~~~s~dg~~-l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~ 397 (433)
T 3bws_A 335 KKV--QKSIP-VFDKPNTIALSPDGKY-LYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFW 397 (433)
T ss_dssp TEE--EEEEE-CSSSEEEEEECTTSSE-EEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEE
T ss_pred CcE--EEEec-CCCCCCeEEEcCCCCE-EEEEecCCCccccccccccccceEEEEEECCCCcEEEEe
Confidence 763 33333 5677999999999996 555554 579999999998876544
No 120
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=7.2e-29 Score=245.67 Aligned_cols=297 Identities=12% Similarity=0.078 Sum_probs=184.8
Q ss_pred eeccccCCCcceeeeecCCCCCCCC-CCEEEEecCCCcEEEeeCCCCCCcCc----ceecCCcchhhhhhccccCCcccc
Q 010748 184 HHHIIIPAFPLCMAWLDCPLKDREK-GNFMAVGSMEPAIEIWDLDVIDEVQP----HVILGGIDEEKKKKKSKKGKKSSI 258 (502)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~s~~-~~~la~g~~dg~I~iwdl~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~ 258 (502)
.|..+++.+|+++.|... +++ ++++++| .++.|.+|+......... ...+......... .........
T Consensus 9 ~~~lpl~~~p~~~~w~~~----~~~~~~l~a~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 81 (393)
T 4gq1_A 9 QYQLPLNVRPYTTTWCSQ----SPSCSNLLAIG-HDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPT--LHLSFSSSC 81 (393)
T ss_dssp EEECCTTCCEEEEEECTT----SGGGTTEEEEE-ESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCE--EEEEECTTC
T ss_pred ceEecCCCCCeEEEEeCC----CCCCCCEEEEE-CCCCEEEEECCCCCcccccccceeeeEEEecCCCe--eeEeecCCc
Confidence 456778899999999643 444 4555555 578899998643211110 0000000000000 000000011
Q ss_pred cccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeee-----EeeccCCCCeEEEEEcC--------CCCcEE
Q 010748 259 KYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCN-----LTLEHHTDKVQAVAWNH--------HSPQIL 325 (502)
Q Consensus 259 ~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~-----~~~~~h~~~v~~l~~~~--------~~~~~l 325 (502)
......|...+....+.++ +.+|++|+.|++|+|||+.++.+. ..+.+|.+.|++++|+| ++ ++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~-~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~-~~l 159 (393)
T 4gq1_A 82 SYSENLHDGDGNVNSSPVY-SLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAE-QVI 159 (393)
T ss_dssp EEECC----------CCEE-EEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEE-EEE
T ss_pred cccccccCCCcceeecCCC-CCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCC-CEE
Confidence 1112234344444444444 678999999999999999887543 34689999999999997 55 899
Q ss_pred EEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCC------------
Q 010748 326 LSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTS------------ 393 (502)
Q Consensus 326 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~------------ 393 (502)
++|+.|++|+|||+++.........+...+.+++|+|++..++++++.||.|++||+++.........
T Consensus 160 as~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~ 239 (393)
T 4gq1_A 160 ASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTL 239 (393)
T ss_dssp EEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEE
T ss_pred EEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEec
Confidence 99999999999999988877778889999999999998877899999999999999988643111000
Q ss_pred ----CccceEEeccCCCeeEEEEc-CCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCcEEEE-------------
Q 010748 394 ----QQSSFTLHAHDKAVCTISYN-PLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSV------------- 455 (502)
Q Consensus 394 ----~~~~~~~~~h~~~v~~l~~s-p~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~------------- 455 (502)
........+|...+.++.|+ |++ ..|++++.|+++++||+..++. ...+..|...+..+
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~v~~~~~dg-~~l~s~s~d~~i~vwd~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~ 316 (393)
T 4gq1_A 240 NTLPLVNTCHSSGIASSLANVRWIGSDG-SGILAMCKSGAWLRWNLFANND--YNEISDSTMKLGPKNLLPNVQGISLFP 316 (393)
T ss_dssp ESGGGC------CCSSSCSEEEEETTTT-CEEEEECTTSEEEEEEC---------------------CCSCSEEEECSSC
T ss_pred ccccceeeeecccccccceeeeeecCCC-CEEEEEeCCCCEEEEECccCCC--CceEeeecCccccEEEccccccccccC
Confidence 00112234678889999997 566 8999999999999999987652 22233333333322
Q ss_pred -----EEcC-CCCcEEEEEeCCCcEEEEECCCCccccccccCC
Q 010748 456 -----AFSE-DSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKY 492 (502)
Q Consensus 456 -----~~sp-d~~~ll~sg~~dg~i~vwd~~~~~~~~~~~~~~ 492 (502)
.|+| .+..++++|+.||.|+|||+.++..+.....+.
T Consensus 317 ~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~ 359 (393)
T 4gq1_A 317 SLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLG 359 (393)
T ss_dssp CSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECS
T ss_pred cceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCC
Confidence 2333 344457788889999999999998877665554
No 121
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=1.7e-27 Score=232.37 Aligned_cols=239 Identities=11% Similarity=0.170 Sum_probs=179.9
Q ss_pred cceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeE
Q 010748 193 PLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL 272 (502)
Q Consensus 193 ~~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 272 (502)
..|++| +|+|++||+|+.++ ++||++....... ..+...+..+
T Consensus 22 V~~v~f-------s~dg~~la~g~~~~-~~iw~~~~~~~~~-----------------------------~~~~~~~~~~ 64 (355)
T 3vu4_A 22 VTDYEF-------NQDQSCLILSTLKS-FEIYNVHPVAHIM-----------------------------SQEMRHLSKV 64 (355)
T ss_dssp CCEEEE-------CTTSSEEEEECSSE-EEEEEETTEEEEE-----------------------------EEECSCCCEE
T ss_pred eEEEEE-------CCCCCEEEEEcCCE-EEEEecCCcceee-----------------------------eeecCCeEEE
Confidence 367777 89999999998775 7899986422111 0122247778
Q ss_pred EeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCC-CCccceEee
Q 010748 273 AWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS-THSGFKWAV 351 (502)
Q Consensus 273 ~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~~ 351 (502)
++.+....++++|+.|++|++||+.+++++..+. |...|.++.|+++. ++++ .++.|++||+++. +.......
T Consensus 65 ~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~---~~~~-~~~~i~i~d~~~~~~~~~~~~~- 138 (355)
T 3vu4_A 65 RMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF---IVVS-YGDVISVFKFGNPWKRITDDIR- 138 (355)
T ss_dssp EECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSE---EEEE-ETTEEEEEESSTTCCBSSCCEE-
T ss_pred EEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCE---EEEE-EcCEEEEEECCCCceeeEEecc-
Confidence 8888755455778889999999999999999887 67799999999864 4443 4789999999987 44433322
Q ss_pred cCCeeEEEeCCCCCCEEEE--EeCCCcEEEEECCCCCCCCCC------CCCcc-ceEEeccCCCeeEEEEcCCCCCEEEE
Q 010748 352 AADVESLAWDPHAEHSFVV--SLEDGTIKGFDIRTAKSDPDS------TSQQS-SFTLHAHDKAVCTISYNPLVPNLLAT 422 (502)
Q Consensus 352 ~~~v~~v~~~~~~~~~~~~--~~~dg~v~i~d~~~~~~~~~~------~~~~~-~~~~~~h~~~v~~l~~sp~~~~~l~t 422 (502)
....+++++ . ++++ |+.+|.|++||+++....... ....+ +..+.+|...|++++|+|++ .+|++
T Consensus 139 --~~~~~~~s~--~-~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g-~~l~s 212 (355)
T 3vu4_A 139 --FGGVCEFSN--G-LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKS-DMVAT 212 (355)
T ss_dssp --EEEEEEEET--T-EEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTS-SEEEE
T ss_pred --CCceEEEEc--c-EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCC-CEEEE
Confidence 344555666 3 4554 689999999999975210000 00013 78889999999999999998 99999
Q ss_pred EeCCCc-EEEEECCCCCeeEEEEec-C-CCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010748 423 GSTDKM-VKLWDLSNNQPSCIASRN-P-KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 423 ~s~dg~-i~vwd~~~~~~~~~~~~~-~-~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~ 483 (502)
|+.|++ |++||+++++ ++..+. + |.+.|++++|+|++. +|++++.|++|+|||+....
T Consensus 213 ~s~d~~~v~iwd~~~~~--~~~~~~~g~h~~~v~~~~~s~~~~-~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 213 CSQDGTIIRVFKTEDGV--LVREFRRGLDRADVVDMKWSTDGS-KLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp EETTCSEEEEEETTTCC--EEEEEECTTCCSCEEEEEECTTSC-EEEEEETTCEEEEEESSCCS
T ss_pred EeCCCCEEEEEECCCCc--EEEEEEcCCCCCcEEEEEECCCCC-EEEEEECCCEEEEEEccCCC
Confidence 999998 9999999988 455555 4 899999999999999 59999999999999998764
No 122
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=1.3e-27 Score=234.06 Aligned_cols=263 Identities=8% Similarity=0.055 Sum_probs=191.2
Q ss_pred cCCCcceeeeecCCCCCCCCCCEEEEecCCC-------cEEEeeCCCCCCcCcceecCCcchhhhhhccccCCccccccc
Q 010748 189 IPAFPLCMAWLDCPLKDREKGNFMAVGSMEP-------AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYK 261 (502)
Q Consensus 189 ~~~~~~~~~~~~~~~~~s~~~~~la~g~~dg-------~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 261 (502)
+..+.+|++| +|++++||+|+.+. .|++|+++......... ........
T Consensus 13 ~g~PV~sv~f-------s~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~-----------------~~~~~~~~ 68 (365)
T 4h5i_A 13 VGYPAYGAKF-------LNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQ-----------------FHILSEFA 68 (365)
T ss_dssp CSSCEEEEEE-------EETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHH-----------------EEEEEEEE
T ss_pred CCCCEEEEEE-------eCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeee-----------------eeeeeEEE
Confidence 3333467777 68999999997543 59999997543221100 00112234
Q ss_pred ccCcccceeeEEeccCCCcEEEEE-----------ecCCcEEEEeCCCCee----eEee-----ccCCCCeEEEEEcCCC
Q 010748 262 KGSHTDSVLGLAWNKEFRNILASA-----------SADKQVKIWDVAAGKC----NLTL-----EHHTDKVQAVAWNHHS 321 (502)
Q Consensus 262 ~~~h~~~V~~l~~~~~~~~~l~sg-----------s~dg~v~vwd~~~~~~----~~~~-----~~h~~~v~~l~~~~~~ 321 (502)
+.+|...|++++++++ .+++| +.|+++++|++..... +... ..+...+.+++|+|+|
T Consensus 69 l~~~~~~v~s~~~~~~---~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg 145 (365)
T 4h5i_A 69 LEDNDDSPTAIDASKG---IILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREG 145 (365)
T ss_dssp CCTTSCCCCEEEEETT---EEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTS
T ss_pred ccCCCCceEEEEeCCC---EEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCC
Confidence 5678899999988754 55554 4578899999865432 1111 2244568999999999
Q ss_pred CcEEEE--EeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceE
Q 010748 322 PQILLS--GSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFT 399 (502)
Q Consensus 322 ~~~l~s--~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~ 399 (502)
+++++ ++.|++|++||+++..... ...+...|.+++|+|++. ++++++ ++.+.+|+..++. ......
T Consensus 146 -~~la~as~~~d~~i~iwd~~~~~~~~-~~~~~~~V~~v~fspdg~-~l~s~s-~~~~~~~~~~~~~-------~~~~~~ 214 (365)
T 4h5i_A 146 -TVAAIASSKVPAIMRIIDPSDLTEKF-EIETRGEVKDLHFSTDGK-VVAYIT-GSSLEVISTVTGS-------CIARKT 214 (365)
T ss_dssp -SCEEEEESCSSCEEEEEETTTTEEEE-EEECSSCCCEEEECTTSS-EEEEEC-SSCEEEEETTTCC-------EEEEEC
T ss_pred -CEEEEEECCCCCEEEEeECCCCcEEE-EeCCCCceEEEEEccCCc-eEEecc-ceeEEEEEeccCc-------ceeeee
Confidence 66654 4478999999999877655 456788999999999876 677776 4556677766651 122233
Q ss_pred EeccCCCeeEEEEcCCCCCEEEEEeCCC----cEEEEECCCCCee--EEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCc
Q 010748 400 LHAHDKAVCTISYNPLVPNLLATGSTDK----MVKLWDLSNNQPS--CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGK 473 (502)
Q Consensus 400 ~~~h~~~v~~l~~sp~~~~~l~t~s~dg----~i~vwd~~~~~~~--~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~ 473 (502)
...|...|.+++|+|++ .++++++.++ .+++|++...... ....+.+|...|++++|+|+++ +||+|+.|++
T Consensus 215 ~~~~~~~v~~v~fspdg-~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~-~lasgs~D~~ 292 (365)
T 4h5i_A 215 DFDKNWSLSKINFIADD-TVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGE-LAVLASNDNS 292 (365)
T ss_dssp CCCTTEEEEEEEEEETT-EEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSC-EEEEEETTSC
T ss_pred cCCCCCCEEEEEEcCCC-CEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCC-ceEEEcCCCE
Confidence 45688899999999998 8899998887 5888998776532 3456678899999999999999 5999999999
Q ss_pred EEEEECCCCccccccccC
Q 010748 474 LEIWDTLSDAGISNRFSK 491 (502)
Q Consensus 474 i~vwd~~~~~~~~~~~~~ 491 (502)
|+|||+.+++++.+....
T Consensus 293 V~iwd~~~~~~~~~~~~g 310 (365)
T 4h5i_A 293 IALVKLKDLSMSKIFKQA 310 (365)
T ss_dssp EEEEETTTTEEEEEETTS
T ss_pred EEEEECCCCcEEEEecCc
Confidence 999999999988876543
No 123
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.1e-27 Score=235.93 Aligned_cols=237 Identities=11% Similarity=0.054 Sum_probs=177.0
Q ss_pred cceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeE
Q 010748 193 PLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL 272 (502)
Q Consensus 193 ~~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 272 (502)
..+++| +|||+++|+++.|++|+ +..... .+.+|...|.++
T Consensus 18 v~sv~~-------SpDG~~iASas~D~TV~--d~~~~~------------------------------~l~gh~~~v~~V 58 (588)
T 2j04_A 18 KNNLTW-------ARDGTLYLTTFPDISIG--QPKYAK------------------------------DINCNSKNLFHV 58 (588)
T ss_dssp SCCEEE-------CTTSCEEEECSSSEEEE--EECCCS------------------------------CCSSBGGGTEEE
T ss_pred EEEEEE-------CCCCCEEEEEcCCceee--cccccc------------------------------eecCCCccEEEE
Confidence 356666 89999999999999999 643211 124799999999
Q ss_pred EeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeec
Q 010748 273 AWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVA 352 (502)
Q Consensus 273 ~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~ 352 (502)
+|+|+| .++++.+|+.... .+.++ .|...|.+++|+|+| .+|++++.||.|++|+... ..... .+.
T Consensus 59 ~FsPdg--------~~~~~~~~~~~~~-~~~~~-~~~~~V~~vawSPdG-~~LAs~s~dg~V~iwd~~~--~l~~l-~~~ 124 (588)
T 2j04_A 59 KEFPLE--------FENKLDFELAQQN-GLLNS-QPVCYPRVCKPSPID-DWMAVLSNNGNVSVFKDNK--MLTNL-DSK 124 (588)
T ss_dssp EEECCC--------CCCTTTTSCCCSS-CSSTT-SCSCCEEEEEECSSS-SCEEEEETTSCEEEEETTE--EEEEC-CCS
T ss_pred EECCCC--------CcceEEEEeCCCc-eEeec-CCCCcEEEEEECCCC-CEEEEEeCCCcEEEEeCCc--eeeec-cCC
Confidence 999995 4566666654322 22333 458899999999999 8999999999999999644 22211 233
Q ss_pred C-----CeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEE----eccCCCeeEEEEcCCCCCEEEEE
Q 010748 353 A-----DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL----HAHDKAVCTISYNPLVPNLLATG 423 (502)
Q Consensus 353 ~-----~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~----~~h~~~v~~l~~sp~~~~~l~t~ 423 (502)
. .+.+++|+|++. ++++|+.||+|++||+..+..... ....+.++ .+|...|.+++|+|++ ++++
T Consensus 125 ~~~~~~sv~svafSPDG~-~LAsgs~DGtVkIWd~~~~~l~~~--~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laas 198 (588)
T 2j04_A 125 GNLSSRTYHCFEWNPIES-SIVVGNEDGELQFFSIRKNSENTP--EFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAA 198 (588)
T ss_dssp SCSTTTCEEEEEECSSSS-CEEEEETTSEEEEEECCCCTTTCC--CCEEEEEEECSCTTCCCCEEEEEEETTE---EEEE
T ss_pred CccccccEEEEEEcCCCC-EEEEEcCCCEEEEEECCCCccccc--cceeeeeeecccccccccEEEEEEcCCc---EEEE
Confidence 3 499999999876 899999999999999987621000 00124565 5677899999999975 8889
Q ss_pred eCCCcEEEEECCCCCee-EEEEe-cCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccccCC
Q 010748 424 STDKMVKLWDLSNNQPS-CIASR-NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKY 492 (502)
Q Consensus 424 s~dg~i~vwd~~~~~~~-~~~~~-~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~~~~ 492 (502)
+.|++|++|++..+... ....+ .+|...|.+++|+ +. .||+++ ++.|++||+.++......++|.
T Consensus 199 s~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~-~LASa~-~~tIkLWd~~~~~~~~~~~gh~ 265 (588)
T 2j04_A 199 LSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DY-KVVLTC-PGYVHKIDLKNYSISSLKTGSL 265 (588)
T ss_dssp ETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TT-EEEEEC-SSEEEEEETTTTEEEEEECSCC
T ss_pred eCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CC-EEEEEe-CCeEEEEECCCCeEEEEEcCCC
Confidence 99999999999887632 22344 4788899999999 55 588776 6999999999887744444543
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=2.7e-26 Score=215.61 Aligned_cols=198 Identities=14% Similarity=0.115 Sum_probs=145.9
Q ss_pred cccceeeEEeccC----CCcEEEEEe--------------------cCCcEEEEeC-CCCeeeEeeccCCCCeEEEEEcC
Q 010748 265 HTDSVLGLAWNKE----FRNILASAS--------------------ADKQVKIWDV-AAGKCNLTLEHHTDKVQAVAWNH 319 (502)
Q Consensus 265 h~~~V~~l~~~~~----~~~~l~sgs--------------------~dg~v~vwd~-~~~~~~~~~~~h~~~v~~l~~~~ 319 (502)
|...|++|+++|+ +. ++++++ .|+.|++|++ .+++.+..+.+|...++.++|++
T Consensus 110 ~~~~v~sla~spd~~~~~~-~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~ 188 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQ-VLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAE 188 (356)
T ss_dssp SEEEEEEECC------CCE-EEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEE
T ss_pred cccceEEEEECCCcccccc-EEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeec
Confidence 4456777777776 33 444444 3888888888 44777788888888888888888
Q ss_pred ---CCCcEEEEEeCCCcEEEEecCCCCCccceEee---cCCeeEEEeCCCCCCE-----------EEEEeCCCcEEEEEC
Q 010748 320 ---HSPQILLSGSFDRSVVMKDARISTHSGFKWAV---AADVESLAWDPHAEHS-----------FVVSLEDGTIKGFDI 382 (502)
Q Consensus 320 ---~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~---~~~v~~v~~~~~~~~~-----------~~~~~~dg~v~i~d~ 382 (502)
++ .+|++|+.|++|+|||+++++....+..+ ...+.+++|+|++..+ +++|+.|++|++||.
T Consensus 189 ~~g~~-~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~ 267 (356)
T 2w18_A 189 VQGMQ-EALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINP 267 (356)
T ss_dssp EETST-TEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEET
T ss_pred cCCCC-ceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEEC
Confidence 45 78999999999999999999876655433 2357788999976532 256788999999999
Q ss_pred CCCCCCCCCCCCccceEE-----eccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCcEE-EEE
Q 010748 383 RTAKSDPDSTSQQSSFTL-----HAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVF-SVA 456 (502)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~-----~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~-~~~ 456 (502)
.++ ..+..+ .+|...+.+..++ + .++++++.|++|+|||+.+++ ++.++.+|...+. +++
T Consensus 268 ~tg---------k~l~v~~~~~p~Gh~~~~lsg~~s--g-~~lASgS~DgTIkIWDl~tGk--~l~tL~gH~~~vvs~va 333 (356)
T 2w18_A 268 KTT---------LSVGVMLYCLPPGQAGRFLEGDVK--D-HCAAAILTSGTIAIWDLLLGQ--CTALLPPVSDQHWSFVK 333 (356)
T ss_dssp TTT---------EEEEEEEECCCTTCCCCEEEEEEE--T-TEEEEEETTSCEEEEETTTCS--EEEEECCC--CCCCEEE
T ss_pred CCC---------EEEEEEEeeccCCCcceeEccccC--C-CEEEEEcCCCcEEEEECCCCc--EEEEecCCCCCeEEEEE
Confidence 876 443333 3566655555555 4 789999999999999999998 6778888877655 689
Q ss_pred EcCCCCcEEEEEeCCCcEEEEEC
Q 010748 457 FSEDSPFVLAIGGSKGKLEIWDT 479 (502)
Q Consensus 457 ~spd~~~ll~sg~~dg~i~vwd~ 479 (502)
|+|+|+ +|++|+.|++|+|||+
T Consensus 334 fSPDG~-~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 334 WSGTDS-HLLAGQKDGNIFVYHY 355 (356)
T ss_dssp ECSSSS-EEEEECTTSCEEEEEE
T ss_pred ECCCCC-EEEEEECCCcEEEecC
Confidence 999999 5999999999999996
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=1.5e-25 Score=221.32 Aligned_cols=238 Identities=14% Similarity=0.099 Sum_probs=186.0
Q ss_pred CCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecC
Q 010748 209 GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD 288 (502)
Q Consensus 209 ~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~d 288 (502)
+.++++++.++.|++||+.++.... .+..| ..+.+++|+|++..++++++.|
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~---------------------------~~~~~-~~~~~~~~s~dg~~l~~~~~~d 53 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTA---------------------------TIPVG-SNPMGAVISPDGTKVYVANAHS 53 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEE---------------------------EEECS-SSEEEEEECTTSSEEEEEEGGG
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEE---------------------------EeecC-CCcceEEECCCCCEEEEECCCC
Confidence 3468889999999999997643221 22234 4589999999966556888899
Q ss_pred CcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEE
Q 010748 289 KQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSF 368 (502)
Q Consensus 289 g~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~ 368 (502)
++|++||+.+++++..+..+. .+.+++|+|++..++++++.++.|++||+.+++... ...+...+.+++|+|++..++
T Consensus 54 ~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~ 131 (391)
T 1l0q_A 54 NDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAG-TVKTGKSPLGLALSPDGKKLY 131 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE-EEECSSSEEEEEECTTSSEEE
T ss_pred CeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEE-EEeCCCCcceEEECCCCCEEE
Confidence 999999999999999887655 899999999994444666678999999999876654 345566789999999987566
Q ss_pred EEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCC
Q 010748 369 VVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPK 448 (502)
Q Consensus 369 ~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~ 448 (502)
++++.++.|++||++++ ..+..+..| ..+.+++|+|++..++++++.++.|++||+.+++. +..+. +
T Consensus 132 ~~~~~~~~v~~~d~~~~---------~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~--~~~~~-~ 198 (391)
T 1l0q_A 132 VTNNGDKTVSVINTVTK---------AVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSV--IDTVK-V 198 (391)
T ss_dssp EEETTTTEEEEEETTTT---------EEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE--EEEEE-C
T ss_pred EEeCCCCEEEEEECCCC---------cEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeE--EEEEe-c
Confidence 78888999999999876 555666554 45799999999844447888899999999998863 33333 4
Q ss_pred CCcEEEEEEcCCCCcEEEEEe--CCCcEEEEECCCCccccccc
Q 010748 449 AGAVFSVAFSEDSPFVLAIGG--SKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 449 ~~~v~~~~~spd~~~ll~sg~--~dg~i~vwd~~~~~~~~~~~ 489 (502)
...+.+++|+|++.++++++. .++.|++||+.+++.+....
T Consensus 199 ~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~ 241 (391)
T 1l0q_A 199 EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIP 241 (391)
T ss_dssp SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEE
T ss_pred CCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEe
Confidence 567999999999996444443 68999999999887765543
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=5.8e-26 Score=213.30 Aligned_cols=187 Identities=13% Similarity=0.138 Sum_probs=141.1
Q ss_pred CCCCEEEEec--CCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEecc---CCCcE
Q 010748 207 EKGNFMAVGS--MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNK---EFRNI 281 (502)
Q Consensus 207 ~~~~~la~g~--~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~---~~~~~ 281 (502)
++++++.+++ .++.|++|++... .+....+.+|...+..++|++ + +.+
T Consensus 143 ~~g~lv~ss~~g~d~~V~~~~~s~d--------------------------G~~~~s~~~~~~~v~~l~fs~~~g~-~~~ 195 (356)
T 2w18_A 143 TKRRLVSSSGTLSDQQVEVMTFAED--------------------------GGGKENQFLMPPEETILTFAEVQGM-QEA 195 (356)
T ss_dssp TTTEEEEEESSSTTCEEEEEEECTT--------------------------SCEEEEEEECCCSSCEEEEEEEETS-TTE
T ss_pred CCCcEEEecccCCCCcEEEEEECCC--------------------------CceeeeeccCCCceeeEEeeccCCC-Cce
Confidence 3577777744 6899999998431 112223447888999999998 4 569
Q ss_pred EEEEecCCcEEEEeCCCCeeeEeeccCC---CCeEEEEEcCCCCcEE------------EEEeCCCcEEEEecCCCCCcc
Q 010748 282 LASASADKQVKIWDVAAGKCNLTLEHHT---DKVQAVAWNHHSPQIL------------LSGSFDRSVVMKDARISTHSG 346 (502)
Q Consensus 282 l~sgs~dg~v~vwd~~~~~~~~~~~~h~---~~v~~l~~~~~~~~~l------------~s~s~dg~i~iwd~~~~~~~~ 346 (502)
|++|+.|++|+|||+.++++++++.+|. ..+.+++|+|++ .++ ++|+.|++|++||..+++...
T Consensus 196 LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG-~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~ 274 (356)
T 2w18_A 196 LLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMG-LLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVG 274 (356)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETT-EEEEEEC------------CCEEEEEEETTTTEEEE
T ss_pred EEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCC-CEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEE
Confidence 9999999999999999999999997643 467888999998 655 678899999999998876543
Q ss_pred ceE-----eecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCee-EEEEcCCCCCEE
Q 010748 347 FKW-----AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC-TISYNPLVPNLL 420 (502)
Q Consensus 347 ~~~-----~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~-~l~~sp~~~~~l 420 (502)
... ++...+.+..++ ..++++++.||+|++||+.++ +.+.++.+|...+. +++|+|++ .+|
T Consensus 275 v~~~~~p~Gh~~~~lsg~~s---g~~lASgS~DgTIkIWDl~tG---------k~l~tL~gH~~~vvs~vafSPDG-~~L 341 (356)
T 2w18_A 275 VMLYCLPPGQAGRFLEGDVK---DHCAAAILTSGTIAIWDLLLG---------QCTALLPPVSDQHWSFVKWSGTD-SHL 341 (356)
T ss_dssp EEEECCCTTCCCCEEEEEEE---TTEEEEEETTSCEEEEETTTC---------SEEEEECCC--CCCCEEEECSSS-SEE
T ss_pred EEEeeccCCCcceeEccccC---CCEEEEEcCCCcEEEEECCCC---------cEEEEecCCCCCeEEEEEECCCC-CEE
Confidence 221 222233333333 237899999999999999987 78889988987655 58999998 999
Q ss_pred EEEeCCCcEEEEEC
Q 010748 421 ATGSTDKMVKLWDL 434 (502)
Q Consensus 421 ~t~s~dg~i~vwd~ 434 (502)
++|+.|++|+|||+
T Consensus 342 aSGS~D~TIklWd~ 355 (356)
T 2w18_A 342 LAGQKDGNIFVYHY 355 (356)
T ss_dssp EEECTTSCEEEEEE
T ss_pred EEEECCCcEEEecC
Confidence 99999999999985
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.92 E-value=2.6e-23 Score=213.68 Aligned_cols=310 Identities=11% Similarity=0.091 Sum_probs=216.7
Q ss_pred cccccccCCCceEEEEEecCCcceeEEEEEec--CCCCCCCeeeeeccccCCCcceeeeecCCCCCCC----CCCEEEEe
Q 010748 142 LEDMTINPNDAVIVCARNEDDVSHLEVYILEE--SDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDRE----KGNFMAVG 215 (502)
Q Consensus 142 v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~----~~~~la~g 215 (502)
+..+.|+|++++|++++.++ .|.+|+. ... . ..........|..+++ +| +|++|+++
T Consensus 181 ~~~v~~spdg~~l~v~~~d~-----~V~v~D~~~~t~---~--~~~~i~~g~~p~~va~-------sp~~~~dg~~l~v~ 243 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDA-----RIDMIDLWAKEP---T--KVAEIKIGIEARSVES-------SKFKGYEDRYTIAG 243 (543)
T ss_dssp EEEEEECTTSCEEEEEETTS-----EEEEEETTSSSC---E--EEEEEECCSEEEEEEE-------CCSTTCTTTEEEEE
T ss_pred cceEEECCCCCEEEEECCCC-----eEEEEECcCCCC---c--EEEEEecCCCcceEEe-------CCCcCCCCCEEEEE
Confidence 77899999999999998775 4455554 322 1 2222233344555554 88 99999999
Q ss_pred cC-CCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCccc-ceeeEEeccCCCcEEEEEecCCcEEE
Q 010748 216 SM-EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTD-SVLGLAWNKEFRNILASASADKQVKI 293 (502)
Q Consensus 216 ~~-dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~V~~l~~~~~~~~~l~sgs~dg~v~v 293 (502)
+. +++|.|||..+.+.+..+...+. . ......|.. .+.++.++|+++.++++...+++|.+
T Consensus 244 ~~~~~~v~v~D~~t~~~~~~i~~~g~----------------~-~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~v 306 (543)
T 1nir_A 244 AYWPPQFAIMDGETLEPKQIVSTRGM----------------T-VDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLL 306 (543)
T ss_dssp EEESSEEEEEETTTCCEEEEEECCEE----------------C-SSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred EccCCeEEEEeccccccceeecccCc----------------c-cCccccccCCceEEEEECCCCCEEEEEECCCCeEEE
Confidence 85 79999999887654432221110 0 000001333 78999999988888889999999999
Q ss_pred EeCCCCeeeE--eeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEe----ecCCeeEEEeCCCCCCE
Q 010748 294 WDVAAGKCNL--TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA----VAADVESLAWDPHAEHS 367 (502)
Q Consensus 294 wd~~~~~~~~--~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~----~~~~v~~v~~~~~~~~~ 367 (502)
||+.+.+.+. .+. +...+..+.|+|++..+++++..+++|.+||+.+++....... |.+....+ ++|++..+
T Consensus 307 vd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~ 384 (543)
T 1nir_A 307 VNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPV 384 (543)
T ss_dssp EECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEE
T ss_pred EEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccE
Confidence 9998876544 443 5677889999999933444555689999999998876543321 33333333 46765556
Q ss_pred EEEEe-CCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEe-------CCCcEEEEECCCCCe
Q 010748 368 FVVSL-EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS-------TDKMVKLWDLSNNQP 439 (502)
Q Consensus 368 ~~~~~-~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s-------~dg~i~vwd~~~~~~ 439 (502)
++++. .+++|.+||+.+..... ...+.+.++..|...+..++++|++ ++|++++ .+++|.|||+.+.+.
T Consensus 385 ~~s~~~~d~~V~v~d~~~~~~~~--~~~~~v~~l~~~g~~~~~v~~~pdg-~~l~v~~~~~~~~~~~~~v~v~d~~~~~~ 461 (543)
T 1nir_A 385 WSTSHLGDGSISLIGTDPKNHPQ--YAWKKVAELQGQGGGSLFIKTHPKS-SHLYVDTTFNPDARISQSVAVFDLKNLDA 461 (543)
T ss_dssp EEEEBSSSSEEEEEECCTTTCTT--TBTSEEEEEECSCSCCCCEECCTTC-CEEEECCTTCSSHHHHTCEEEEETTCTTS
T ss_pred EEeccCCCceEEEEEeCCCCCch--hcCeEEEEEEcCCCCceEEEcCCCC-CcEEEecCCCCCcccCceEEEEECCCCCC
Confidence 66665 68999999998721100 0037788999999999999999998 8888876 267999999998874
Q ss_pred e-EEEE------ecCCCCcEEEEEEcCCCCcEEEEEe----CCCcEEEEECCCCcccccccc
Q 010748 440 S-CIAS------RNPKAGAVFSVAFSEDSPFVLAIGG----SKGKLEIWDTLSDAGISNRFS 490 (502)
Q Consensus 440 ~-~~~~------~~~~~~~v~~~~~spd~~~ll~sg~----~dg~i~vwd~~~~~~~~~~~~ 490 (502)
. .... +..+...+..+.|+|+|.+++++.. .++.|.|||..+++++.++-.
T Consensus 462 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~ 523 (543)
T 1nir_A 462 KYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKD 523 (543)
T ss_dssp CCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred CeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecC
Confidence 3 1211 1345678999999999998666543 479999999999998866553
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.92 E-value=3.1e-23 Score=213.09 Aligned_cols=287 Identities=13% Similarity=0.110 Sum_probs=209.5
Q ss_pred ccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCCcEEEe
Q 010748 145 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIW 224 (502)
Q Consensus 145 ~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~dg~I~iw 224 (502)
..++|++.++++++.++ .|.+|+.... .+. ........+.++.+ +|+|++|++++.++.|++|
T Consensus 143 ~~~~p~~~~~vs~~~d~-----~V~v~D~~t~---~~~--~~i~~g~~~~~v~~-------spdg~~l~v~~~d~~V~v~ 205 (543)
T 1nir_A 143 NDLDLPNLFSVTLRDAG-----QIALVDGDSK---KIV--KVIDTGYAVHISRM-------SASGRYLLVIGRDARIDMI 205 (543)
T ss_dssp SCCCGGGEEEEEEGGGT-----EEEEEETTTC---CEE--EEEECSTTEEEEEE-------CTTSCEEEEEETTSEEEEE
T ss_pred cccCCCCEEEEEEcCCC-----eEEEEECCCc---eEE--EEEecCcccceEEE-------CCCCCEEEEECCCCeEEEE
Confidence 35889998888887776 5555665543 222 11111111344444 8999999999999999999
Q ss_pred eC--CCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEecc----CCCcEEEEEe-cCCcEEEEeCC
Q 010748 225 DL--DVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNK----EFRNILASAS-ADKQVKIWDVA 297 (502)
Q Consensus 225 dl--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~----~~~~~l~sgs-~dg~v~vwd~~ 297 (502)
|+ .+...+. .+. +...+.+++|+| +++ +|++++ .+++|.+||..
T Consensus 206 D~~~~t~~~~~---------------------------~i~-~g~~p~~va~sp~~~~dg~-~l~v~~~~~~~v~v~D~~ 256 (543)
T 1nir_A 206 DLWAKEPTKVA---------------------------EIK-IGIEARSVESSKFKGYEDR-YTIAGAYWPPQFAIMDGE 256 (543)
T ss_dssp ETTSSSCEEEE---------------------------EEE-CCSEEEEEEECCSTTCTTT-EEEEEEEESSEEEEEETT
T ss_pred ECcCCCCcEEE---------------------------EEe-cCCCcceEEeCCCcCCCCC-EEEEEEccCCeEEEEecc
Confidence 99 4322111 111 345679999999 854 677766 58999999999
Q ss_pred CCeeeEeecc----------CC-CCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCcc-ceEeecCCeeEEEeCCCCC
Q 010748 298 AGKCNLTLEH----------HT-DKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG-FKWAVAADVESLAWDPHAE 365 (502)
Q Consensus 298 ~~~~~~~~~~----------h~-~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~-~~~~~~~~v~~v~~~~~~~ 365 (502)
+++++.++.. |. ..+.++.++|++..++++...++.|.+||+.+.+... ....+...+..+.|+|++.
T Consensus 257 t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~ 336 (543)
T 1nir_A 257 TLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHR 336 (543)
T ss_dssp TCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSC
T ss_pred ccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCC
Confidence 9999888754 22 3789999999887888888899999999998765433 2334566788999999987
Q ss_pred CEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEec----cCCCeeEEEEcCCCCCEEEEEe-CCCcEEEEECCCCC--
Q 010748 366 HSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA----HDKAVCTISYNPLVPNLLATGS-TDKMVKLWDLSNNQ-- 438 (502)
Q Consensus 366 ~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~----h~~~v~~l~~sp~~~~~l~t~s-~dg~i~vwd~~~~~-- 438 (502)
.+++++..++.|.+||+.++ +.+..+.. |.+....+ ++|+++.++++++ .|++|.|||+.+..
T Consensus 337 ~l~va~~~~~~v~v~D~~tg---------~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~ 406 (543)
T 1nir_A 337 YFMTAANNSNKVAVIDSKDR---------RLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHP 406 (543)
T ss_dssp EEEEEEGGGTEEEEEETTTT---------EEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCT
T ss_pred EEEEEecCCCeEEEEECCCC---------eEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCc
Confidence 55566667899999999987 55555553 55444443 5777547777776 58999999998711
Q ss_pred ---eeEEEEecCCCCcEEEEEEcCCCCcEEEEEe-------CCCcEEEEECCCCcccccc
Q 010748 439 ---PSCIASRNPKAGAVFSVAFSEDSPFVLAIGG-------SKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 439 ---~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~-------~dg~i~vwd~~~~~~~~~~ 488 (502)
..++.++..|.+.+..++|+|++++ |++++ .+++|.|||+.+++.+.+.
T Consensus 407 ~~~~~~v~~l~~~g~~~~~v~~~pdg~~-l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~ 465 (543)
T 1nir_A 407 QYAWKKVAELQGQGGGSLFIKTHPKSSH-LYVDTTFNPDARISQSVAVFDLKNLDAKYQV 465 (543)
T ss_dssp TTBTSEEEEEECSCSCCCCEECCTTCCE-EEECCTTCSSHHHHTCEEEEETTCTTSCCEE
T ss_pred hhcCeEEEEEEcCCCCceEEEcCCCCCc-EEEecCCCCCcccCceEEEEECCCCCCCeEE
Confidence 2377888888888899999999996 66665 2679999999999877444
No 129
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=3e-23 Score=200.52 Aligned_cols=284 Identities=10% Similarity=0.139 Sum_probs=182.4
Q ss_pred CceEEEE-EecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCC-CcEEEeeCCC
Q 010748 151 DAVIVCA-RNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSME-PAIEIWDLDV 228 (502)
Q Consensus 151 ~~~l~~~-~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~d-g~I~iwdl~~ 228 (502)
+++|+++ +.++ .+.+|.++... .+...........|.+++| +|+|++|++++.+ +.|.+|+++.
T Consensus 4 ~~~l~~~~~~~~---~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-------spdg~~l~~~~~~~~~v~~~~~~~ 69 (343)
T 1ri6_A 4 KQTVYIASPESQ---QIHVWNLNHEG----ALTLTQVVDVPGQVQPMVV-------SPDKRYLYVGVRPEFRVLAYRIAP 69 (343)
T ss_dssp EEEEEEEEGGGT---EEEEEEECTTS----CEEEEEEEECSSCCCCEEE-------CTTSSEEEEEETTTTEEEEEEECT
T ss_pred eEEEEEeCCCCC---eEEEEEECCCC----cEEEeeeEecCCCCceEEE-------CCCCCEEEEeecCCCeEEEEEecC
Confidence 3455555 4444 56666665322 2222222233445667777 8999999888876 9999999972
Q ss_pred CCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeC---CCCeeeEee
Q 010748 229 IDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV---AAGKCNLTL 305 (502)
Q Consensus 229 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~---~~~~~~~~~ 305 (502)
.... ......+..+ ..+.+++|+|++..+++++..++.|.+||+ .+.+.+..+
T Consensus 70 ~~~~-----------------------~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 125 (343)
T 1ri6_A 70 DDGA-----------------------LTFAAESALP-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV 125 (343)
T ss_dssp TTCC-----------------------EEEEEEEECS-SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE
T ss_pred CCCc-----------------------eeeccccccC-CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccc
Confidence 1100 0001111122 378999999996544445555889999999 444555555
Q ss_pred ccCCCCeEEEEEcCCCCcEEEEEe-CCCcEEEEecCC-CCCccc-----eEeecCCeeEEEeCCCCCCEEEEEeCCCcEE
Q 010748 306 EHHTDKVQAVAWNHHSPQILLSGS-FDRSVVMKDARI-STHSGF-----KWAVAADVESLAWDPHAEHSFVVSLEDGTIK 378 (502)
Q Consensus 306 ~~h~~~v~~l~~~~~~~~~l~s~s-~dg~i~iwd~~~-~~~~~~-----~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~ 378 (502)
..+ ..+.+++|+|++ ++|++++ .++.|.+||+.+ +..... .......+..++|+|++..+++++..++.|.
T Consensus 126 ~~~-~~~~~~~~s~dg-~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~ 203 (343)
T 1ri6_A 126 EGL-DGCHSANISPDN-RTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVD 203 (343)
T ss_dssp CCC-TTBCCCEECTTS-SEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred cCC-CCceEEEECCCC-CEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEE
Confidence 543 468899999999 6666666 899999999987 432211 1122346889999999875556666899999
Q ss_pred EEECCCCCCCCCCCCCccceEEec------cCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECC--CCCeeEEEEecCCCC
Q 010748 379 GFDIRTAKSDPDSTSQQSSFTLHA------HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLS--NNQPSCIASRNPKAG 450 (502)
Q Consensus 379 i~d~~~~~~~~~~~~~~~~~~~~~------h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~--~~~~~~~~~~~~~~~ 450 (502)
+|++...... ......... ....+.+++|+|++..+++++..++.|++|++. ++....+.....+..
T Consensus 204 ~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~ 278 (343)
T 1ri6_A 204 VWELKDPHGN-----IECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ 278 (343)
T ss_dssp EEESSCTTSC-----CEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS
T ss_pred EEEecCCCCc-----EEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc
Confidence 9999642110 011222221 123567899999984444466679999999998 444444444544444
Q ss_pred cEEEEEEcCCCCcEEEEEeCCCcEEEEECC
Q 010748 451 AVFSVAFSEDSPFVLAIGGSKGKLEIWDTL 480 (502)
Q Consensus 451 ~v~~~~~spd~~~ll~sg~~dg~i~vwd~~ 480 (502)
+.+++|+|+++++++++..++.|.+|++.
T Consensus 279 -~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 279 -PRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp -CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred -cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 88999999999755544478999999554
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=5.8e-23 Score=204.53 Aligned_cols=230 Identities=12% Similarity=0.107 Sum_probs=170.9
Q ss_pred CCEEEEecCC------CcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEE
Q 010748 209 GNFMAVGSME------PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNIL 282 (502)
Q Consensus 209 ~~~la~g~~d------g~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l 282 (502)
+..++.++.+ +.|++||++... ...+.+|...|.+++|+|+ +.+|
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~----------------------------~~~l~~~~~~v~~~~~Spd-g~~l 193 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYN----------------------------QFVVHRSPQPLMSPAWSPD-GSKL 193 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCS----------------------------CEEEEEESSCEEEEEECTT-SSEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCC----------------------------CEEEeCCCCcceeeEEcCC-CCEE
Confidence 5666666554 799999997321 1133468889999999999 5588
Q ss_pred EEEecCC---cEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEE-EEeCCCc--EEEEecCCCCCccceEeecCCee
Q 010748 283 ASASADK---QVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILL-SGSFDRS--VVMKDARISTHSGFKWAVAADVE 356 (502)
Q Consensus 283 ~sgs~dg---~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~-s~s~dg~--i~iwd~~~~~~~~~~~~~~~~v~ 356 (502)
++++.++ .|++||+.++++. .+..|...+.+++|+|++ +.|+ +++.++. |++||++++... ....+...+.
T Consensus 194 a~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg-~~la~~~~~~g~~~i~~~d~~~~~~~-~l~~~~~~~~ 270 (415)
T 2hqs_A 194 AYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDG-SKLAFALSKTGSLNLYVMDLASGQIR-QVTDGRSNNT 270 (415)
T ss_dssp EEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTTCCEE-ECCCCSSCEE
T ss_pred EEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCC-CEEEEEEecCCCceEEEEECCCCCEE-eCcCCCCccc
Confidence 8888875 9999999998875 466688899999999999 5555 7777665 999999886653 3445677899
Q ss_pred EEEeCCCCCCEEEEEe-CCC--cEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCC---CcEE
Q 010748 357 SLAWDPHAEHSFVVSL-EDG--TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD---KMVK 430 (502)
Q Consensus 357 ~v~~~~~~~~~~~~~~-~dg--~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~d---g~i~ 430 (502)
+++|+|++. .+++++ .++ .|++||+.++ ....+..|...+.+++|+|++ .+|++++.+ ..|+
T Consensus 271 ~~~~spdg~-~l~~~s~~~g~~~i~~~d~~~~----------~~~~l~~~~~~~~~~~~spdG-~~l~~~~~~~g~~~i~ 338 (415)
T 2hqs_A 271 EPTWFPDSQ-NLAFTSDQAGRPQVYKVNINGG----------APQRITWEGSQNQDADVSSDG-KFMVMVSSNGGQQHIA 338 (415)
T ss_dssp EEEECTTSS-EEEEEECTTSSCEEEEEETTSS----------CCEECCCSSSEEEEEEECTTS-SEEEEEEECSSCEEEE
T ss_pred ceEECCCCC-EEEEEECCCCCcEEEEEECCCC----------CEEEEecCCCcccCeEECCCC-CEEEEEECcCCceEEE
Confidence 999999987 455554 455 6777788765 234455677789999999998 777776654 5799
Q ss_pred EEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCC---cEEEEECCCCcccccc
Q 010748 431 LWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKG---KLEIWDTLSDAGISNR 488 (502)
Q Consensus 431 vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg---~i~vwd~~~~~~~~~~ 488 (502)
+||+.+++. ..+..+. .+.+++|+|++++ |++++.++ .|++||+.++ .+.++
T Consensus 339 ~~d~~~~~~---~~l~~~~-~~~~~~~spdg~~-l~~~s~~~~~~~l~~~d~~g~-~~~~l 393 (415)
T 2hqs_A 339 KQDLATGGV---QVLSSTF-LDETPSLAPNGTM-VIYSSSQGMGSVLNLVSTDGR-FKARL 393 (415)
T ss_dssp EEETTTCCE---EECCCSS-SCEEEEECTTSSE-EEEEEEETTEEEEEEEETTSC-CEEEC
T ss_pred EEECCCCCE---EEecCCC-CcCCeEEcCCCCE-EEEEEcCCCccEEEEEECCCC-cEEEe
Confidence 999998873 3344443 7999999999995 66666655 7999998743 34433
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=2.8e-22 Score=193.09 Aligned_cols=283 Identities=8% Similarity=0.009 Sum_probs=189.0
Q ss_pred ccccCCCceEE-EEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC-CCcEE
Q 010748 145 MTINPNDAVIV-CARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM-EPAIE 222 (502)
Q Consensus 145 ~~~~p~~~~l~-~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~-dg~I~ 222 (502)
..|.++++.++ ++..++ .|++|+...+ .+....... ...+ +++| +|+|++|++++. ++.|.
T Consensus 3 ~~~~~~~~~~~v~~~~~~-----~v~~~d~~~~---~~~~~~~~~-~~~~-~~~~-------s~dg~~l~~~~~~~~~i~ 65 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLR-----RISFFSTDTL---EILNQITLG-YDFV-DTAI-------TSDCSNVVVTSDFCQTLV 65 (331)
T ss_dssp ----CCCCEEEEEEGGGT-----EEEEEETTTC---CEEEEEECC-CCEE-EEEE-------CSSSCEEEEEESTTCEEE
T ss_pred eeEcCCCCEEEEEecCCC-----eEEEEeCccc---ceeeeEEcc-CCcc-eEEE-------cCCCCEEEEEeCCCCeEE
Confidence 34666666644 444444 6666665544 322111111 1222 5555 899997666655 88999
Q ss_pred EeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCC---cEEEEeCCCC
Q 010748 223 IWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADK---QVKIWDVAAG 299 (502)
Q Consensus 223 iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg---~v~vwd~~~~ 299 (502)
+||+.+.... ...+..+..++.+++|+|++ .+|+++..++ .|.+||+.++
T Consensus 66 ~~d~~~~~~~--------------------------~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~i~v~d~~~~ 118 (331)
T 3u4y_A 66 QIETQLEPPK--------------------------VVAIQEGQSSMADVDITPDD-QFAVTVTGLNHPFNMQSYSFLKN 118 (331)
T ss_dssp EEECSSSSCE--------------------------EEEEEECSSCCCCEEECTTS-SEEEECCCSSSSCEEEEEETTTT
T ss_pred EEECCCCcee--------------------------EEecccCCCCccceEECCCC-CEEEEecCCCCcccEEEEECCCC
Confidence 9999764320 11222344555559999995 4666555553 8999999999
Q ss_pred eeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCc-EEEEecCCCCCcc----ceEeecCCeeEEEeCCCCCCEEEEEeCC
Q 010748 300 KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRS-VVMKDARISTHSG----FKWAVAADVESLAWDPHAEHSFVVSLED 374 (502)
Q Consensus 300 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~-i~iwd~~~~~~~~----~~~~~~~~v~~v~~~~~~~~~~~~~~~d 374 (502)
+.+..+.. ...+.+++|+|++..+++++..++. |.+|++....... ........+..++|+|++..+++++..+
T Consensus 119 ~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~ 197 (331)
T 3u4y_A 119 KFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIG 197 (331)
T ss_dssp EEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTT
T ss_pred CeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCC
Confidence 98888764 4457899999999556666677788 9999998644331 1223345689999999987566666778
Q ss_pred CcEEEEECCCCCCCCCCCCCcc---ceEEeccCCCeeEEEEcCCCCCEE-EEEeCCCcEEEEECCCCCeeEEEEecCC--
Q 010748 375 GTIKGFDIRTAKSDPDSTSQQS---SFTLHAHDKAVCTISYNPLVPNLL-ATGSTDKMVKLWDLSNNQPSCIASRNPK-- 448 (502)
Q Consensus 375 g~v~i~d~~~~~~~~~~~~~~~---~~~~~~h~~~v~~l~~sp~~~~~l-~t~s~dg~i~vwd~~~~~~~~~~~~~~~-- 448 (502)
+.|++||+.++ .. +..+.. ...+..++|+|++ ++| ++...++.|.+||+.+++...+..+..+
T Consensus 198 ~~v~v~d~~~~---------~~~~~~~~~~~-~~~~~~~~~spdg-~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 266 (331)
T 3u4y_A 198 NSIGILETQNP---------ENITLLNAVGT-NNLPGTIVVSRDG-STVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLL 266 (331)
T ss_dssp TEEEEEECSST---------TSCEEEEEEEC-SSCCCCEEECTTS-SEEEEECSSEEEEEEEETTTTEEEEEEEEECCCC
T ss_pred CeEEEEECCCC---------cccceeeeccC-CCCCceEEECCCC-CEEEEEEcCCCEEEEEECCCCceeeecccccccc
Confidence 99999999876 33 455553 4667899999998 644 4555678899999998875434433322
Q ss_pred --CC---cEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010748 449 --AG---AVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 449 --~~---~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~ 483 (502)
.. ....++|+|+++++++++..++.|.+||+....
T Consensus 267 ~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 267 IDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp CCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred cCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 12 224589999999766777777899999997654
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.91 E-value=5.5e-22 Score=197.49 Aligned_cols=268 Identities=15% Similarity=0.040 Sum_probs=186.8
Q ss_pred CccccccccccC--------------CCceEEEEEecCCc-ceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCC
Q 010748 138 DSEDLEDMTINP--------------NDAVIVCARNEDDV-SHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCP 202 (502)
Q Consensus 138 ~~~~v~~~~~~p--------------~~~~l~~~~~~~~~-~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 202 (502)
|...+..+.+++ .+..|+.++..... ..-.|++|+...... .....|. ....+++|
T Consensus 116 ~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~-~~l~~~~----~~v~~~~~---- 186 (415)
T 2hqs_A 116 NKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQ-FVVHRSP----QPLMSPAW---- 186 (415)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSC-EEEEEES----SCEEEEEE----
T ss_pred ChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCCC-EEEeCCC----CcceeeEE----
Confidence 556677777775 15555555544211 012455555433211 2223332 23467777
Q ss_pred CCCCCCCCEEEEecCCC---cEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCC
Q 010748 203 LKDREKGNFMAVGSMEP---AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFR 279 (502)
Q Consensus 203 ~~~s~~~~~la~g~~dg---~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~ 279 (502)
+|+|++||+++.++ .|++||+.++... .+..|...+.+++|+|++.
T Consensus 187 ---Spdg~~la~~s~~~~~~~i~~~d~~tg~~~----------------------------~l~~~~~~~~~~~~spdg~ 235 (415)
T 2hqs_A 187 ---SPDGSKLAYVTFESGRSALVIQTLANGAVR----------------------------QVASFPRHNGAPAFSPDGS 235 (415)
T ss_dssp ---CTTSSEEEEEECTTSSCEEEEEETTTCCEE----------------------------EEECCSSCEEEEEECTTSS
T ss_pred ---cCCCCEEEEEEecCCCcEEEEEECCCCcEE----------------------------EeecCCCcccCEEEcCCCC
Confidence 89999999999875 9999999754321 2235777899999999965
Q ss_pred cEEEEEecCCc--EEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeC-CC--cEEEEecCCCCCccceEeecCC
Q 010748 280 NILASASADKQ--VKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSF-DR--SVVMKDARISTHSGFKWAVAAD 354 (502)
Q Consensus 280 ~~l~sgs~dg~--v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~-dg--~i~iwd~~~~~~~~~~~~~~~~ 354 (502)
.++++++.++. |++||+.++++ ..+..|...+.+++|+|++ +.|++++. ++ .|.+||+.++.... ...+...
T Consensus 236 ~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg-~~l~~~s~~~g~~~i~~~d~~~~~~~~-l~~~~~~ 312 (415)
T 2hqs_A 236 KLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDS-QNLAFTSDQAGRPQVYKVNINGGAPQR-ITWEGSQ 312 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTSSCCEE-CCCSSSE
T ss_pred EEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCC-CEEEEEECCCCCcEEEEEECCCCCEEE-EecCCCc
Confidence 44447777665 99999998876 5677788899999999999 66776665 45 67777888765432 2334567
Q ss_pred eeEEEeCCCCCCEEEEEeC--CCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCC---cE
Q 010748 355 VESLAWDPHAEHSFVVSLE--DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK---MV 429 (502)
Q Consensus 355 v~~v~~~~~~~~~~~~~~~--dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg---~i 429 (502)
+.+++|+|++..+++++.. ++.|++||+.++ .. ..+..|. .+.+++|+|++ .+|++++.++ .|
T Consensus 313 ~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~---------~~-~~l~~~~-~~~~~~~spdg-~~l~~~s~~~~~~~l 380 (415)
T 2hqs_A 313 NQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG---------GV-QVLSSTF-LDETPSLAPNG-TMVIYSSSQGMGSVL 380 (415)
T ss_dssp EEEEEECTTSSEEEEEEECSSCEEEEEEETTTC---------CE-EECCCSS-SCEEEEECTTS-SEEEEEEEETTEEEE
T ss_pred ccCeEECCCCCEEEEEECcCCceEEEEEECCCC---------CE-EEecCCC-CcCCeEEcCCC-CEEEEEEcCCCccEE
Confidence 8899999998744444443 258999999875 22 3455554 89999999998 7788877766 79
Q ss_pred EEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCc
Q 010748 430 KLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPF 463 (502)
Q Consensus 430 ~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ 463 (502)
++||+.... ...+..|.+.|.+++|+|.-.|
T Consensus 381 ~~~d~~g~~---~~~l~~~~~~v~~~~~~~~~~~ 411 (415)
T 2hqs_A 381 NLVSTDGRF---KARLPATDGQVKFPAWSPYLHH 411 (415)
T ss_dssp EEEETTSCC---EEECCCSSSEEEEEEECCCCCC
T ss_pred EEEECCCCc---EEEeeCCCCCCcCCcccccccc
Confidence 999998654 5677888899999999997543
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.91 E-value=2e-22 Score=216.08 Aligned_cols=294 Identities=9% Similarity=0.089 Sum_probs=203.9
Q ss_pred ccccccccccCCCceEEEEEe-cCCcceeEEEEEecCCCCCCCeeeeecccc------------------C--CCcceee
Q 010748 139 SEDLEDMTINPNDAVIVCARN-EDDVSHLEVYILEESDGGDPNLYVHHHIII------------------P--AFPLCMA 197 (502)
Q Consensus 139 ~~~v~~~~~~p~~~~l~~~~~-~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~------------------~--~~~~~~~ 197 (502)
...+.+++|+|+|++|++++. +++.....||+|+...+....+..++.... . ....++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~- 114 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY- 114 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCC-
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCccee-
Confidence 346889999999999999987 543334577777766542222222221110 0 001233
Q ss_pred eecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccC
Q 010748 198 WLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKE 277 (502)
Q Consensus 198 ~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~ 277 (502)
.|||+|++|++++. +.|++||+.++... ....+..|...+.+++|+|+
T Consensus 115 ------~~SpDg~~l~~~~~-~~i~~~d~~~~~~~-------------------------~~~~l~~~~~~~~~~~~SPD 162 (741)
T 2ecf_A 115 ------QWSPDAQRLLFPLG-GELYLYDLKQEGKA-------------------------AVRQLTHGEGFATDAKLSPK 162 (741)
T ss_dssp ------EECTTSSEEEEEET-TEEEEEESSSCSTT-------------------------SCCBCCCSSSCEEEEEECTT
T ss_pred ------EECCCCCEEEEEeC-CcEEEEECCCCCcc-------------------------eEEEcccCCcccccccCCCC
Confidence 34999999999986 99999999754100 01123357788999999999
Q ss_pred CCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCC----------------eEEEEEcCCCCcEEEEEeCCC---------
Q 010748 278 FRNILASASADKQVKIWDVAAGKCNLTLEHHTDK----------------VQAVAWNHHSPQILLSGSFDR--------- 332 (502)
Q Consensus 278 ~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~----------------v~~l~~~~~~~~~l~s~s~dg--------- 332 (502)
+ .+|++++ ++.|++||+.+++.......+... +.++.|+|+| +.|++++.++
T Consensus 163 G-~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg-~~l~~~~~d~~~~~~~~~~ 239 (741)
T 2ecf_A 163 G-GFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDD-SAIAYARIDESPVPVQKRY 239 (741)
T ss_dssp S-SEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTS-SCEEEEEEECTTSCEEEEE
T ss_pred C-CEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCC-CEEEEEEEcCCCCceEecC
Confidence 4 5787777 469999999998876655544432 4789999999 7777776665
Q ss_pred ------------------------cEEEEecCC-CCCccceE--eecCCeeEEEeCCCCCCEEEEEe----CCCcEEEEE
Q 010748 333 ------------------------SVVMKDARI-STHSGFKW--AVAADVESLAWDPHAEHSFVVSL----EDGTIKGFD 381 (502)
Q Consensus 333 ------------------------~i~iwd~~~-~~~~~~~~--~~~~~v~~v~~~~~~~~~~~~~~----~dg~v~i~d 381 (502)
.|.+||+.+ ++...... .+...+..++| |++..+++++. .++.|++||
T Consensus 240 ~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d 318 (741)
T 2ecf_A 240 EVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVT 318 (741)
T ss_dssp EECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEE
T ss_pred CCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEE
Confidence 788999987 66543222 24567899999 99874444433 356799999
Q ss_pred CCCCCCCCCCCCCccceEEeccCC----CeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCcEEEE-E
Q 010748 382 IRTAKSDPDSTSQQSSFTLHAHDK----AVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSV-A 456 (502)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~h~~----~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~-~ 456 (502)
+.++ .....+..+.. .+.+++|+|++ +++++++.+|.++||.+..... ...+..+...|.++ .
T Consensus 319 ~~~g---------~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~~~~~~--~~~l~~~~~~v~~~~~ 386 (741)
T 2ecf_A 319 LASN---------QQRVLAHETSPTWVPLHNSLRFLDDG-SILWSSERTGFQHLYRIDSKGK--AAALTHGNWSVDELLA 386 (741)
T ss_dssp TTTC---------CEEEEEEEECSSCCCCCSCCEECTTS-CEEEEECTTSSCEEEEECSSSC--EEESCCSSSCEEEEEE
T ss_pred CCCC---------ceEEEEEcCCCCcCCcCCceEECCCC-eEEEEecCCCccEEEEEcCCCC--eeeeeecceEEEeEeE
Confidence 9886 34444444443 45789999998 6999999999888887763222 45566677788887 5
Q ss_pred EcCCCCcEEEEEeCCC--cEEEEECCC
Q 010748 457 FSEDSPFVLAIGGSKG--KLEIWDTLS 481 (502)
Q Consensus 457 ~spd~~~ll~sg~~dg--~i~vwd~~~ 481 (502)
|+|+++.++++++.++ .++||++..
T Consensus 387 ~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 387 VDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp EETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred EeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 9999997666777666 899999864
No 134
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=8.3e-21 Score=184.22 Aligned_cols=290 Identities=10% Similarity=0.086 Sum_probs=186.2
Q ss_pred eEEEEEec-CCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC---CCcEEEeeCCC
Q 010748 153 VIVCARNE-DDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM---EPAIEIWDLDV 228 (502)
Q Consensus 153 ~l~~~~~~-~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~---dg~I~iwdl~~ 228 (502)
.+++|+.. +....+.+|.++...+ .+...........|..++| +|+|+ |++++. ++.|++|++..
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~tg---~~~~~~~~~~~~~p~~~a~-------spdg~-l~~~~~~~~~~~v~~~~~~~ 72 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTAK---TLTNDGLLAATQNPTYLAL-------SAKDC-LYSVDKEDDEGGIAAWQIDG 72 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTT---EEEEEEEEEECSCCCCEEE-------CTTCE-EEEEEEETTEEEEEEEEEET
T ss_pred EEEEEeccCCCCCCEEEEEEcCCCC---eEEEeeeeeccCCcceEEE-------ccCCe-EEEEEecCCCceEEEEEecC
Confidence 34555432 2234678888887654 3332222222344555655 89999 554443 68999999954
Q ss_pred CCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEe-cCCcEEEEeCCC-C--eeeEe
Q 010748 229 IDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS-ADKQVKIWDVAA-G--KCNLT 304 (502)
Q Consensus 229 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs-~dg~v~vwd~~~-~--~~~~~ 304 (502)
+.. .....+..+...+..++|+|++. +|++++ .+++|.+|++.. + +.+..
T Consensus 73 g~~-------------------------~~~~~~~~~~~~p~~~a~spdg~-~l~~~~~~~~~v~v~~~~~~g~~~~~~~ 126 (347)
T 3hfq_A 73 QTA-------------------------HKLNTVVAPGTPPAYVAVDEARQ-LVYSANYHKGTAEVMKIAADGALTLTDT 126 (347)
T ss_dssp TEE-------------------------EEEEEEEEESCCCSEEEEETTTT-EEEEEETTTTEEEEEEECTTSCEEEEEE
T ss_pred CcE-------------------------EEeeeeecCCCCCEEEEECCCCC-EEEEEeCCCCEEEEEEeCCCCCeeecce
Confidence 221 11111224667889999999954 666666 789999999962 2 33333
Q ss_pred ecc---------CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceE----eecCCeeEEEeCCCCCCEEEEE
Q 010748 305 LEH---------HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW----AVAADVESLAWDPHAEHSFVVS 371 (502)
Q Consensus 305 ~~~---------h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~----~~~~~v~~v~~~~~~~~~~~~~ 371 (502)
+.. +...+.+++|+|++ +++++...++.|.+|++.......... .....+..++|+|++..+++++
T Consensus 127 ~~~~~~~p~~~~~~~~~~~~~~spdg-~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~ 205 (347)
T 3hfq_A 127 VQHSGHGPRPEQDGSHIHYTDLTPDN-RLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAG 205 (347)
T ss_dssp EECCCCCSSTTCSSCCEEEEEECTTS-CEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred eecCCCCCCccccCCCceEEEECCCC-cEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEe
Confidence 321 12348899999999 577777778999999998322222111 1233678899999987566667
Q ss_pred eCCCcEEEEECCCCCCCCCCCCCccceEEeccC------CCeeEEEEcCCCCCEEEEEeCCCcEEEEECCC-CCeeEEEE
Q 010748 372 LEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHD------KAVCTISYNPLVPNLLATGSTDKMVKLWDLSN-NQPSCIAS 444 (502)
Q Consensus 372 ~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~------~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~-~~~~~~~~ 444 (502)
..++.|.+|++...... ...+..+.... ..+..++|+|++..+++++..++.|.+|++.. +....+..
T Consensus 206 ~~~~~v~v~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~ 280 (347)
T 3hfq_A 206 ELSSQIASLKYDTQTGA-----FTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQ 280 (347)
T ss_dssp TTTTEEEEEEEETTTTE-----EEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEE
T ss_pred CCCCEEEEEEecCCCCc-----eEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEE
Confidence 78899999998752100 11222333322 34888999999833446677799999999973 34445555
Q ss_pred ecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEE--CCCCccc
Q 010748 445 RNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD--TLSDAGI 485 (502)
Q Consensus 445 ~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd--~~~~~~~ 485 (502)
...+...+..++|+|+++++++++..++.|.+|+ ..+++..
T Consensus 281 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 281 ISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp EECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred EecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 6666667889999999997555444568999994 4555543
No 135
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=2.2e-21 Score=193.92 Aligned_cols=218 Identities=12% Similarity=0.106 Sum_probs=150.4
Q ss_pred ccccccccccCCCceEEEEEecCCcceeEEEEEecCCC------CCCCeee---eeccccCCCcceeeeecCCCCCCCCC
Q 010748 139 SEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDG------GDPNLYV---HHHIIIPAFPLCMAWLDCPLKDREKG 209 (502)
Q Consensus 139 ~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~------~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~s~~~ 209 (502)
...++.++++|++.+|++++.++ +.||....... ....+.. ......+..+.+++| +|+|
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg----v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-------spdg 104 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG----LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLAL-------SCDN 104 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE----EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEE-------CTTS
T ss_pred CCCccEEEEecCCCEEEEECCCE----EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEE-------cCCC
Confidence 34689999999999999987653 45543321100 0001111 011223444567777 8999
Q ss_pred CEEE----EecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEE
Q 010748 210 NFMA----VGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASA 285 (502)
Q Consensus 210 ~~la----~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sg 285 (502)
++|| +|+.|+.|+|||+.+..... ....+.......+.+|...|.+++|+|+.+++|++|
T Consensus 105 ~~lav~~~sgs~d~~v~iwd~~~~~~~~----------------~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~ 168 (434)
T 2oit_A 105 LTLSACMMSSEYGSIIAFFDVRTFSNEA----------------KQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVC 168 (434)
T ss_dssp CEEEEEEEETTTEEEEEEEEHHHHHCTT----------------CSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEE
T ss_pred CEEEEEEeccCCCceEEEEEccccccCC----------------cCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEE
Confidence 9999 78899999999986420000 000001112334567999999999999867899999
Q ss_pred ecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEee-------cCCeeEE
Q 010748 286 SADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV-------AADVESL 358 (502)
Q Consensus 286 s~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-------~~~v~~v 358 (502)
+.||+|++||++++..+....+|...|++++|+|++ .+|++|+.||+|++||++ .........+ ...+.++
T Consensus 169 s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg-~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v 246 (434)
T 2oit_A 169 LADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKG-KQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDV 246 (434)
T ss_dssp ETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTS-SCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEE
T ss_pred ECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCC-CEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEE
Confidence 999999999999998777777789999999999998 899999999999999998 3222211111 2378999
Q ss_pred EeCCCCCCEEEEEeCCCc------EEEEECCCC
Q 010748 359 AWDPHAEHSFVVSLEDGT------IKGFDIRTA 385 (502)
Q Consensus 359 ~~~~~~~~~~~~~~~dg~------v~i~d~~~~ 385 (502)
+|++++..+++.+..+|. +++|++++.
T Consensus 247 ~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 247 LWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 999865422333444433 899999875
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.89 E-value=1.6e-20 Score=182.17 Aligned_cols=286 Identities=11% Similarity=0.063 Sum_probs=195.1
Q ss_pred ccccccccccCCCceEEEEEecCC--cceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEE-Ee
Q 010748 139 SEDLEDMTINPNDAVIVCARNEDD--VSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMA-VG 215 (502)
Q Consensus 139 ~~~v~~~~~~p~~~~l~~~~~~~~--~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la-~g 215 (502)
...+..+.|+|+++.|++++..+. ...-.|++|+.... .+. ........|.++.| +|+|++++ ++
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~---~~~--~~~~~~~~~~~~~~-------s~dg~~l~v~~ 107 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTL---EVT--QAIHNDLKPFGATI-------NNTTQTLWFGN 107 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTC---CEE--EEEEESSCCCSEEE-------ETTTTEEEEEE
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCC---eEE--EEEecCCCcceEEE-------CCCCCEEEEEe
Confidence 345778999999999988875421 00126777776554 222 11223444566666 78888555 55
Q ss_pred cCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEe--cCCcEEE
Q 010748 216 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS--ADKQVKI 293 (502)
Q Consensus 216 ~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs--~dg~v~v 293 (502)
..++.|.+||+.++........-.+ .. ........+.+++|+|+++ ++++++ .++.|.+
T Consensus 108 ~~~~~v~~~d~~~~~~~~~~~~~~~---------------~~---~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~i~~ 168 (353)
T 3vgz_A 108 TVNSAVTAIDAKTGEVKGRLVLDDR---------------KR---TEEVRPLQPRELVADDATN-TVYISGIGKESVIWV 168 (353)
T ss_dssp TTTTEEEEEETTTCCEEEEEESCCC---------------CC---CSSCCCCEEEEEEEETTTT-EEEEEEESSSCEEEE
T ss_pred cCCCEEEEEeCCCCeeEEEEecCCC---------------cc---ccccCCCCCceEEECCCCC-EEEEEecCCCceEEE
Confidence 5679999999986543322111000 00 0001112378899999965 444444 5789999
Q ss_pred EeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEe----ecCCeeEEEeCCCCCCEEE
Q 010748 294 WDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA----VAADVESLAWDPHAEHSFV 369 (502)
Q Consensus 294 wd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~----~~~~v~~v~~~~~~~~~~~ 369 (502)
||+.+++.+..+..+...+.++.|+|++ ++|++++.++.|.+||+.+.+....... +...+..++|+|++..+++
T Consensus 169 ~d~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 247 (353)
T 3vgz_A 169 VDGGNIKLKTAIQNTGKMSTGLALDSEG-KRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFI 247 (353)
T ss_dssp EETTTTEEEEEECCCCTTCCCCEEETTT-TEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEE
T ss_pred EcCCCCceEEEecCCCCccceEEECCCC-CEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEE
Confidence 9999999998887666778999999999 7888888999999999988765543222 2445778999999875555
Q ss_pred EEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCC
Q 010748 370 VSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKA 449 (502)
Q Consensus 370 ~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~ 449 (502)
+...++.|.+||+.++ ..+..+..+. ..+++|+|++..++++...++.|.+||+.+++. +..+.. .
T Consensus 248 ~~~~~~~v~~~d~~~~---------~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~--~~~~~~-~ 313 (353)
T 3vgz_A 248 TDSKAAEVLVVDTRNG---------NILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKV--VKTFDT-P 313 (353)
T ss_dssp EESSSSEEEEEETTTC---------CEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEE--EEEEEC-C
T ss_pred EeCCCCEEEEEECCCC---------cEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeE--EEEEec-C
Confidence 5566699999999876 4455554433 267999999844555665799999999998874 333333 3
Q ss_pred CcEEEEEEcCCCCcEEEEEeC
Q 010748 450 GAVFSVAFSEDSPFVLAIGGS 470 (502)
Q Consensus 450 ~~v~~~~~spd~~~ll~sg~~ 470 (502)
..+.+++|+|++++++++...
T Consensus 314 ~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 314 THPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp SEEEEEEECTTSCEEEEEEEC
T ss_pred CCCCeEEEcCCCCEEEEEEcc
Confidence 468999999999965555443
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=1.9e-21 Score=183.19 Aligned_cols=234 Identities=12% Similarity=0.064 Sum_probs=168.2
Q ss_pred CCcceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCC-CCCcCcceecCCcchhhhhhccccCCcccccccccCc-ccc
Q 010748 191 AFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDV-IDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSH-TDS 268 (502)
Q Consensus 191 ~~~~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~ 268 (502)
....++.| +|+|++|++++ ++.|++||+.+ ..... ....| ...
T Consensus 42 ~~v~~~~~-------spdg~~l~~~~-~~~i~~~d~~~~~~~~~---------------------------~~~~~~~~~ 86 (297)
T 2ojh_A 42 ELFEAPNW-------SPDGKYLLLNS-EGLLYRLSLAGDPSPEK---------------------------VDTGFATIC 86 (297)
T ss_dssp SCCEEEEE-------CTTSSEEEEEE-TTEEEEEESSSCCSCEE---------------------------CCCTTCCCB
T ss_pred cceEeeEE-------CCCCCEEEEEc-CCeEEEEeCCCCCCceE---------------------------ecccccccc
Confidence 34467777 89999999987 78999999975 32211 11123 477
Q ss_pred eeeEEeccCCCcEEEEEe--cCCcEEE--EeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCC-
Q 010748 269 VLGLAWNKEFRNILASAS--ADKQVKI--WDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST- 343 (502)
Q Consensus 269 V~~l~~~~~~~~~l~sgs--~dg~v~v--wd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~- 343 (502)
|.+++|+|+ +.+|++++ .++.+.| |++.+++ ...+..+ ..+.+++|+|++..++++++.++.+.+|++....
T Consensus 87 ~~~~~~spd-g~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~ 163 (297)
T 2ojh_A 87 NNDHGISPD-GALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG 163 (297)
T ss_dssp CSCCEECTT-SSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC
T ss_pred ccceEECCC-CCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCC
Confidence 899999999 45788887 3344455 4555554 3445433 3489999999994455588899999999975432
Q ss_pred CccceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEE
Q 010748 344 HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG 423 (502)
Q Consensus 344 ~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~ 423 (502)
.......+...+.+++|+|++..+++++..++.+++|++... ......+..|...+.+++|+|++ .+|+++
T Consensus 164 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~--------~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~ 234 (297)
T 2ojh_A 164 VETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVD--------GSSVERITDSAYGDWFPHPSPSG-DKVVFV 234 (297)
T ss_dssp CEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT--------SSCEEECCCCSEEEEEEEECTTS-SEEEEE
T ss_pred cceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCC--------CCCcEEEecCCcccCCeEECCCC-CEEEEE
Confidence 222334556789999999988754555556899999998743 24566677788889999999998 777777
Q ss_pred eCC-----------CcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCC
Q 010748 424 STD-----------KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSK 471 (502)
Q Consensus 424 s~d-----------g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~d 471 (502)
+.+ +.|++||+.+++...+.....|...+.+++|+|+++++++++..+
T Consensus 235 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 235 SYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 665 569999999887666666667778899999999999644444433
No 138
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.88 E-value=1.7e-20 Score=199.94 Aligned_cols=296 Identities=13% Similarity=0.077 Sum_probs=195.8
Q ss_pred cccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCC
Q 010748 140 EDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEP 219 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~dg 219 (502)
..|.+++|+|+ +.++++. ++ .||+|+...+ .+.... .....+.+++| ||+|++||++ .++
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~-----~i~~~d~~~~---~~~~l~--~~~~~~~~~~~-------SpdG~~la~~-~~~ 141 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QG-----GLVGFDMLAR---KVTYLF--DTNEETASLDF-------SPVGDRVAYV-RNH 141 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TT-----EEEEEETTTT---EEEEEE--CCTTCCTTCEE-------CTTSSEEEEE-ETT
T ss_pred cCceeEEECCC-CeEEEEE-CC-----EEEEEECCCC---ceEEcc--CCcccccCCcC-------CCCCCEEEEE-ECC
Confidence 46899999999 6666654 34 6666665544 221111 01222344555 8999999995 679
Q ss_pred cEEEeeCCC-----CCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEe--------
Q 010748 220 AIEIWDLDV-----IDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS-------- 286 (502)
Q Consensus 220 ~I~iwdl~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs-------- 286 (502)
.|++|++.+ +..... ...+. .. ...... ....+...+.+++|+|++ .+|++++
T Consensus 142 ~i~v~~~~~~~~~~g~~~~~-~~~~~-~~----------~~~g~~-~~~ee~~~~~~~~~SpDg-~~la~~~~d~~~~~~ 207 (706)
T 2z3z_A 142 NLYIARGGKLGEGMSRAIAV-TIDGT-ET----------LVYGQA-VHQREFGIEKGTFWSPKG-SCLAFYRMDQSMVKP 207 (706)
T ss_dssp EEEEEECBCTTSCCCCCEES-CSCCB-TT----------EEESSC-CGGGCTTCCCSEEECTTS-SEEEEEEEECTTSCC
T ss_pred eEEEEecCcccccCCCcEEe-ccCCC-CC----------eEcccc-hhhhhcCCCceEEECCCC-CEEEEEEECCCCCce
Confidence 999999976 432210 00000 00 000000 111223346899999994 5777776
Q ss_pred -------------------------cCCcEEEEeCCCCeeeEeec--cCCCCeEEEEEcCCCCcEEEEEeCCC-----cE
Q 010748 287 -------------------------ADKQVKIWDVAAGKCNLTLE--HHTDKVQAVAWNHHSPQILLSGSFDR-----SV 334 (502)
Q Consensus 287 -------------------------~dg~v~vwd~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~s~dg-----~i 334 (502)
.+..|++||+.+++...... .|...+.+++|+|++ +.|++++.++ .|
T Consensus 208 ~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~v 286 (706)
T 2z3z_A 208 TPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDE-NILYVAEVNRAQNECKV 286 (706)
T ss_dssp EEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTS-SEEEEEEECTTSCEEEE
T ss_pred EEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCC-CEEEEEEeCCCCCeeEE
Confidence 44679999999988655442 467789999999999 7788777665 89
Q ss_pred EEEecCCCCCccceEe-e-cC---CeeEEEeCC--CCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCe
Q 010748 335 VMKDARISTHSGFKWA-V-AA---DVESLAWDP--HAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAV 407 (502)
Q Consensus 335 ~iwd~~~~~~~~~~~~-~-~~---~v~~v~~~~--~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v 407 (502)
.+||+.++........ . .. .+.+++|+| ++. +++++..+|.+++|.+... ...+..+..|...+
T Consensus 287 ~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~-~l~~~~~~g~~~l~~~~~~--------~~~~~~l~~~~~~v 357 (706)
T 2z3z_A 287 NAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQ-FIWQSRRDGWNHLYLYDTT--------GRLIRQVTKGEWEV 357 (706)
T ss_dssp EEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSE-EEEEECTTSSCEEEEEETT--------SCEEEECCCSSSCE
T ss_pred EEEECCCCceeeEEEEccCCCeECccCCceeecCCCCE-EEEEEccCCccEEEEEECC--------CCEEEecCCCCeEE
Confidence 9999988733322222 1 21 246789999 876 7888888999999987632 25566677777778
Q ss_pred eE-EEEcCCCCCEEEEEeCCC----cEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCC---CcEEEEEC
Q 010748 408 CT-ISYNPLVPNLLATGSTDK----MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSK---GKLEIWDT 479 (502)
Q Consensus 408 ~~-l~~sp~~~~~l~t~s~dg----~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~d---g~i~vwd~ 479 (502)
.. ++|+|++..++++++.++ .|..||+.++... .+ .+...+.+++|+|++++++++++.. +.|++||+
T Consensus 358 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~---~l-~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~ 433 (706)
T 2z3z_A 358 TNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTK---DL-TPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNI 433 (706)
T ss_dssp EEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCE---ES-CCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEES
T ss_pred EeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCce---ec-cCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEEC
Confidence 77 799999844445555555 6777788776522 22 2566799999999999755554444 56999999
Q ss_pred CCCc
Q 010748 480 LSDA 483 (502)
Q Consensus 480 ~~~~ 483 (502)
.+++
T Consensus 434 ~~~~ 437 (706)
T 2z3z_A 434 GKGS 437 (706)
T ss_dssp SSCE
T ss_pred CCCe
Confidence 8876
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.88 E-value=4.3e-21 Score=180.79 Aligned_cols=228 Identities=10% Similarity=0.031 Sum_probs=168.1
Q ss_pred EecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEE
Q 010748 214 VGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKI 293 (502)
Q Consensus 214 ~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~v 293 (502)
.++.++.|++||+.+... ..+..|...|.+++|+|+ +.+|++++ ++.|++
T Consensus 17 ~~~~~~~i~~~d~~~~~~----------------------------~~~~~~~~~v~~~~~spd-g~~l~~~~-~~~i~~ 66 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKM----------------------------RVVWQTPELFEAPNWSPD-GKYLLLNS-EGLLYR 66 (297)
T ss_dssp -CCCCEEEEEEETTTTEE----------------------------EEEEEESSCCEEEEECTT-SSEEEEEE-TTEEEE
T ss_pred CCCcceeEEEEeCCCCce----------------------------eeeccCCcceEeeEECCC-CCEEEEEc-CCeEEE
Confidence 356789999999975321 122357889999999999 45787776 789999
Q ss_pred EeCCC-CeeeEeeccC-CCCeEEEEEcCCCCcEEEEEe--CCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEEE
Q 010748 294 WDVAA-GKCNLTLEHH-TDKVQAVAWNHHSPQILLSGS--FDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFV 369 (502)
Q Consensus 294 wd~~~-~~~~~~~~~h-~~~v~~l~~~~~~~~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~ 369 (502)
||+.+ ++....+..| ...+.+++|+|++ ++|++++ .++...||.+...............+..++|+|++..+++
T Consensus 67 ~d~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 145 (297)
T 2ojh_A 67 LSLAGDPSPEKVDTGFATICNNDHGISPDG-ALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTY 145 (297)
T ss_dssp EESSSCCSCEECCCTTCCCBCSCCEECTTS-SEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEE
T ss_pred EeCCCCCCceEeccccccccccceEECCCC-CEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCCCCEEEE
Confidence 99999 8777766655 4788999999999 7888888 3455666655432222223334445889999999876666
Q ss_pred EEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEe-CCCcEEEEECC-CCCeeEEEEecC
Q 010748 370 VSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS-TDKMVKLWDLS-NNQPSCIASRNP 447 (502)
Q Consensus 370 ~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s-~dg~i~vwd~~-~~~~~~~~~~~~ 447 (502)
++..++.+++|++... ......+..|...+.+++|+|++ .+|++++ .++.++||++. ... ....+..
T Consensus 146 ~~~~~~~~~l~~~~~~--------~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~i~~~~~~~~--~~~~~~~ 214 (297)
T 2ojh_A 146 CGIRDQVFDIYSMDID--------SGVETRLTHGEGRNDGPDYSPDG-RWIYFNSSRTGQMQIWRVRVDGS--SVERITD 214 (297)
T ss_dssp EEEETTEEEEEEEETT--------TCCEEECCCSSSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTSS--CEEECCC
T ss_pred EECCCCceEEEEEECC--------CCcceEcccCCCccccceECCCC-CEEEEEecCCCCccEEEECCCCC--CcEEEec
Confidence 8888999999997543 13455667788899999999998 6555554 68999999886 333 3455666
Q ss_pred CCCcEEEEEEcCCCCcEEEEEeCC-----------CcEEEEECCCCcc
Q 010748 448 KAGAVFSVAFSEDSPFVLAIGGSK-----------GKLEIWDTLSDAG 484 (502)
Q Consensus 448 ~~~~v~~~~~spd~~~ll~sg~~d-----------g~i~vwd~~~~~~ 484 (502)
+...+.+++|+|++++ |++++.+ +.|++||+.+++.
T Consensus 215 ~~~~~~~~~~s~dg~~-l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 215 SAYGDWFPHPSPSGDK-VVFVSYDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp CSEEEEEEEECTTSSE-EEEEEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred CCcccCCeEECCCCCE-EEEEEcCCCCCcccccCceEEEEEecCCCCc
Confidence 7788999999999996 5555544 5699999988765
No 140
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.88 E-value=7e-20 Score=178.73 Aligned_cols=294 Identities=10% Similarity=0.121 Sum_probs=185.1
Q ss_pred cccCCCceEEEEEecC-CcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCC----Cc
Q 010748 146 TINPNDAVIVCARNED-DVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSME----PA 220 (502)
Q Consensus 146 ~~~p~~~~l~~~~~~~-~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~d----g~ 220 (502)
...+...++++|+... ....+.+|.++...+ .+...... ....|..++| +|+|++|++++.+ +.
T Consensus 8 ~~~~~~~~~~vg~y~~~~~~~i~~~~~d~~~g---~~~~~~~~-~~~~p~~l~~-------spdg~~l~~~~~~~~~~~~ 76 (361)
T 3scy_A 8 STTDSELTMLVGTYTSGNSKGIYTFRFNEETG---ESLPLSDA-EVANPSYLIP-------SADGKFVYSVNEFSKDQAA 76 (361)
T ss_dssp CGGGGEEEEEEEECCSSSCCEEEEEEEETTTC---CEEEEEEE-ECSCCCSEEE-------CTTSSEEEEEECCSSTTCE
T ss_pred hhCCCceEEEEEeccCCCCCCEEEEEEeCCCC---CEEEeecc-cCCCCceEEE-------CCCCCEEEEEEccCCCCCc
Confidence 3445556677775432 334678888876655 33332222 3444556666 8999999998875 79
Q ss_pred EEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeCCCCe
Q 010748 221 IEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK 300 (502)
Q Consensus 221 I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~ 300 (502)
|.+|+++..... .........+......+++ +++.++++...++.|.+|++....
T Consensus 77 v~~~~~~~~~g~-----------------------~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g 131 (361)
T 3scy_A 77 VSAFAFDKEKGT-----------------------LHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDG 131 (361)
T ss_dssp EEEEEEETTTTE-----------------------EEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTS
T ss_pred EEEEEEeCCCCc-----------------------EEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCC
Confidence 999998642110 0011111224456777787 544344444468899999997543
Q ss_pred eeEee------cc--------CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCC------c-------cceEeecC
Q 010748 301 CNLTL------EH--------HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH------S-------GFKWAVAA 353 (502)
Q Consensus 301 ~~~~~------~~--------h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~------~-------~~~~~~~~ 353 (502)
.+..+ .+ +...+.+++|+|++..+++++..++.|.+|++..... . ........
T Consensus 132 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 211 (361)
T 3scy_A 132 ALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGS 211 (361)
T ss_dssp CBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTC
T ss_pred cCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCC
Confidence 32211 11 2234688999999933445555689999999876542 1 11123345
Q ss_pred CeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEe---ccCCCeeEEEEcCCCCCEEEEEeC--CCc
Q 010748 354 DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH---AHDKAVCTISYNPLVPNLLATGST--DKM 428 (502)
Q Consensus 354 ~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~---~h~~~v~~l~~sp~~~~~l~t~s~--dg~ 428 (502)
.+..++|+|++..+++++..++.|.+|++.++. ...+..+. .+......++|+|++ ++|+++.. ++.
T Consensus 212 ~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~-------~~~~~~~~~~~~~~~~~~~i~~spdg-~~l~v~~~~~~~~ 283 (361)
T 3scy_A 212 GPRHLIFNSDGKFAYLINEIGGTVIAFRYADGM-------LDEIQTVAADTVNAQGSGDIHLSPDG-KYLYASNRLKADG 283 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTCEEEEEEEETTE-------EEEEEEEESCSSCCCCEEEEEECTTS-SEEEEEECSSSCE
T ss_pred CCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCc-------eEEeEEEecCCCCCCCcccEEECCCC-CEEEEECCCCCCE
Confidence 688999999987444444478999999998541 12223332 233456899999998 66655554 589
Q ss_pred EEEEECC--CCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEEC--CCCcc
Q 010748 429 VKLWDLS--NNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT--LSDAG 484 (502)
Q Consensus 429 i~vwd~~--~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~--~~~~~ 484 (502)
|.+|++. +++...+..... ...+.+++|+|+++++++++..++.|.+|.+ .+++.
T Consensus 284 i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~ 342 (361)
T 3scy_A 284 VAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLL 342 (361)
T ss_dssp EEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcE
Confidence 9999996 455444444444 4567899999999975555547789999655 45544
No 141
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.88 E-value=5.2e-20 Score=177.62 Aligned_cols=278 Identities=10% Similarity=0.101 Sum_probs=178.4
Q ss_pred CccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC
Q 010748 138 DSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM 217 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~ 217 (502)
+...+..++|+|++++|++++.++ ..+.+|.++...+ .+...........|.+++| +|++++|++++.
T Consensus 36 ~~~~~~~~~~spdg~~l~~~~~~~--~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-------s~dg~~l~~~~~ 103 (343)
T 1ri6_A 36 VPGQVQPMVVSPDKRYLYVGVRPE--FRVLAYRIAPDDG---ALTFAAESALPGSLTHIST-------DHQGQFVFVGSY 103 (343)
T ss_dssp CSSCCCCEEECTTSSEEEEEETTT--TEEEEEEECTTTC---CEEEEEEEECSSCCSEEEE-------CTTSSEEEEEET
T ss_pred cCCCCceEEECCCCCEEEEeecCC--CeEEEEEecCCCC---ceeeccccccCCCCcEEEE-------cCCCCEEEEEec
Confidence 345688899999999998888653 3667777763333 3332222333445667777 799998876654
Q ss_pred -CCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEe-cCCcEEEEe
Q 010748 218 -EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS-ADKQVKIWD 295 (502)
Q Consensus 218 -dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs-~dg~v~vwd 295 (502)
++.|.+|++..+... ...... .....+.+++|+|++. +|++++ .++.|++||
T Consensus 104 ~~~~i~~~d~~~~~~~------------------------~~~~~~-~~~~~~~~~~~s~dg~-~l~~~~~~~~~v~~~d 157 (343)
T 1ri6_A 104 NAGNVSVTRLEDGLPV------------------------GVVDVV-EGLDGCHSANISPDNR-TLWVPALKQDRICLFT 157 (343)
T ss_dssp TTTEEEEEEEETTEEE------------------------EEEEEE-CCCTTBCCCEECTTSS-EEEEEEGGGTEEEEEE
T ss_pred CCCeEEEEECCCCccc------------------------cccccc-cCCCCceEEEECCCCC-EEEEecCCCCEEEEEE
Confidence 789999998421110 011111 1234588999999955 555555 899999999
Q ss_pred CCC-CeeeE----eecc-CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCC--CCCccce-Ee-e------cCCeeEEE
Q 010748 296 VAA-GKCNL----TLEH-HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI--STHSGFK-WA-V------AADVESLA 359 (502)
Q Consensus 296 ~~~-~~~~~----~~~~-h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~--~~~~~~~-~~-~------~~~v~~v~ 359 (502)
+.+ ++... .+.. ....+.+++|+|++..+++++..++.|.+|++.. +...... .. . ...+..++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ 237 (343)
T 1ri6_A 158 VSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIH 237 (343)
T ss_dssp ECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEE
T ss_pred ecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceE
Confidence 987 65432 2222 3457889999999943445555899999999964 2221111 11 1 12466899
Q ss_pred eCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEe-CCCcEEEE--ECCC
Q 010748 360 WDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS-TDKMVKLW--DLSN 436 (502)
Q Consensus 360 ~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s-~dg~i~vw--d~~~ 436 (502)
|+|++..+++++..++.|.+|++..... ....+..+..+.. +.+++|+|++ .+|++++ .++.|.+| |..+
T Consensus 238 ~s~dg~~l~v~~~~~~~i~v~d~~~~~~-----~~~~~~~~~~~~~-~~~~~~s~dg-~~l~~~~~~~~~v~v~~~d~~~ 310 (343)
T 1ri6_A 238 ITPDGRHLYACDRTASLITVFSVSEDGS-----VLSKEGFQPTETQ-PRGFNVDHSG-KYLIAAGQKSHHISVYEIVGEQ 310 (343)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTSC-----CEEEEEEEECSSS-CCCEEECTTS-SEEEEECTTTCEEEEEEEETTT
T ss_pred ECCCCCEEEEEecCCCEEEEEEEcCCCC-----ceEEeeeecCCCc-cceEEECCCC-CEEEEecCCCCeEEEEEEcCCC
Confidence 9999875555666899999999983210 0134444444444 8999999998 6666666 68999999 4446
Q ss_pred CCeeEEEEecCCCCcEEEEEEcCCC
Q 010748 437 NQPSCIASRNPKAGAVFSVAFSEDS 461 (502)
Q Consensus 437 ~~~~~~~~~~~~~~~v~~~~~spd~ 461 (502)
++...+..+... ....+++|.|+.
T Consensus 311 g~~~~~~~~~~g-~~p~~i~~~~~~ 334 (343)
T 1ri6_A 311 GLLHEKGRYAVG-QGPMWVVVNAHE 334 (343)
T ss_dssp TEEEEEEEEECS-SSCCEEEEEEEC
T ss_pred ceeeEccccccC-CCCeeEEEEccc
Confidence 654444444432 335566666543
No 142
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.87 E-value=1.9e-20 Score=180.17 Aligned_cols=243 Identities=9% Similarity=0.078 Sum_probs=174.4
Q ss_pred CCC-CCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEE
Q 010748 206 REK-GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 284 (502)
Q Consensus 206 s~~-~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~s 284 (502)
.++ +..+++++.++.|++||+.++..... ...+...+ +++|+|++..++++
T Consensus 6 ~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~---------------------------~~~~~~~~-~~~~s~dg~~l~~~ 57 (331)
T 3u4y_A 6 QTTSNFGIVVEQHLRRISFFSTDTLEILNQ---------------------------ITLGYDFV-DTAITSDCSNVVVT 57 (331)
T ss_dssp -CCCCEEEEEEGGGTEEEEEETTTCCEEEE---------------------------EECCCCEE-EEEECSSSCEEEEE
T ss_pred cCCCCEEEEEecCCCeEEEEeCcccceeee---------------------------EEccCCcc-eEEEcCCCCEEEEE
Confidence 344 45577888899999999976433221 11234455 99999996545555
Q ss_pred EecCCcEEEEeCCCCee-eEeeccCCCCeEEEEEcCCCCcEEEEEeCCC---cEEEEecCCCCCccceEeecCCeeEEEe
Q 010748 285 ASADKQVKIWDVAAGKC-NLTLEHHTDKVQAVAWNHHSPQILLSGSFDR---SVVMKDARISTHSGFKWAVAADVESLAW 360 (502)
Q Consensus 285 gs~dg~v~vwd~~~~~~-~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg---~i~iwd~~~~~~~~~~~~~~~~v~~v~~ 360 (502)
+..++.|.+||+.+++. ...+..+..+..+++|+|++ ++|+++..++ .|.+||+.+.+... .......+.+++|
T Consensus 58 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~i~v~d~~~~~~~~-~~~~~~~~~~~~~ 135 (331)
T 3u4y_A 58 SDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDD-QFAVTVTGLNHPFNMQSYSFLKNKFIS-TIPIPYDAVGIAI 135 (331)
T ss_dssp ESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTS-SEEEECCCSSSSCEEEEEETTTTEEEE-EEECCTTEEEEEE
T ss_pred eCCCCeEEEEECCCCceeEEecccCCCCccceEECCCC-CEEEEecCCCCcccEEEEECCCCCeEE-EEECCCCccceEE
Confidence 55589999999999987 77777676666669999999 7777555553 89999998876544 3455667899999
Q ss_pred CCCCCCEEEEEeCCCc-EEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCe
Q 010748 361 DPHAEHSFVVSLEDGT-IKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 439 (502)
Q Consensus 361 ~~~~~~~~~~~~~dg~-v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~ 439 (502)
+|++..+++++..++. |.+|++...... .........+......++|+|++..+++++..++.|++||+.+++.
T Consensus 136 spdg~~l~~~~~~~~~~i~~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 136 SPNGNGLILIDRSSANTVRRFKIDADGVL-----FDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp CTTSSCEEEEEETTTTEEEEEEECTTCCE-----EEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred CCCCCEEEEEecCCCceEEEEEECCCCcE-----eecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 9998877777777788 999999854110 0000222234556899999999843556666789999999998874
Q ss_pred -eEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcc
Q 010748 440 -SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 484 (502)
Q Consensus 440 -~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~ 484 (502)
..+..+.. ...+..++|+|++++++++...++.|.+||+.+++.
T Consensus 211 ~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 211 ITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp CEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred cceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 11334433 356788999999997666666678899999998876
No 143
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.87 E-value=2.4e-20 Score=179.59 Aligned_cols=278 Identities=15% Similarity=0.160 Sum_probs=188.8
Q ss_pred ceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCC---CcceeeeecCCCCCCCCCCEE-EEecCCCcEEEeeCC
Q 010748 152 AVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPA---FPLCMAWLDCPLKDREKGNFM-AVGSMEPAIEIWDLD 227 (502)
Q Consensus 152 ~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~s~~~~~l-a~g~~dg~I~iwdl~ 227 (502)
++|++++.++ .|++|+.... .+. ....++. .|.+++| +|+|+++ ++++.++.|.+||+.
T Consensus 2 ~~~v~~~~~~-----~v~~~d~~~~---~~~--~~~~~~~~~~~~~~~~~-------s~dg~~l~v~~~~~~~v~~~d~~ 64 (337)
T 1pby_B 2 DYILAPARPD-----KLVVIDTEKM---AVD--KVITIADAGPTPMVPMV-------APGGRIAYATVNKSESLVKIDLV 64 (337)
T ss_dssp EEEEEEETTT-----EEEEEETTTT---EEE--EEEECTTCTTCCCCEEE-------CTTSSEEEEEETTTTEEEEEETT
T ss_pred cEEEEcCCCC-----eEEEEECCCC---cEE--EEEEcCCCCCCccceEE-------cCCCCEEEEEeCCCCeEEEEECC
Confidence 4677777776 6666665543 221 1122233 3566666 8999765 556667899999997
Q ss_pred CCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEe------------cCCcEEEEe
Q 010748 228 VIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS------------ADKQVKIWD 295 (502)
Q Consensus 228 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs------------~dg~v~vwd 295 (502)
++........ + ....|...+.+++|+|++. +|++++ .++.|.+||
T Consensus 65 ~~~~~~~~~~-~---------------------~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~~~~~~i~v~d 121 (337)
T 1pby_B 65 TGETLGRIDL-S---------------------TPEERVKSLFGAALSPDGK-TLAIYESPVRLELTHFEVQPTRVALYD 121 (337)
T ss_dssp TCCEEEEEEC-C---------------------BTTEEEECTTCEEECTTSS-EEEEEEEEEEECSSCEEECCCEEEEEE
T ss_pred CCCeEeeEEc-C---------------------CcccccccccceEECCCCC-EEEEEecccccccccccccCceEEEEE
Confidence 6543221110 0 0001334678999999954 666665 579999999
Q ss_pred CCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEEEEEeCCC
Q 010748 296 VAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDG 375 (502)
Q Consensus 296 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg 375 (502)
+.+++.+..+.. ...+.+++|+|++ ++|+++ ++.|.+||+.+.+.... .........+.|+|++..+++++..++
T Consensus 122 ~~~~~~~~~~~~-~~~~~~~~~s~dg-~~l~~~--~~~i~~~d~~~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~ 196 (337)
T 1pby_B 122 AETLSRRKAFEA-PRQITMLAWARDG-SKLYGL--GRDLHVMDPEAGTLVED-KPIQSWEAETYAQPDVLAVWNQHESSG 196 (337)
T ss_dssp TTTTEEEEEEEC-CSSCCCEEECTTS-SCEEEE--SSSEEEEETTTTEEEEE-ECSTTTTTTTBCCCBCCCCCCCCTTTT
T ss_pred CCCCcEEEEEeC-CCCcceeEECCCC-CEEEEe--CCeEEEEECCCCcEeee-eeccccCCCceeCCCccEEeeeccCCC
Confidence 999988887764 4568889999999 666666 68999999987764432 222221123378888765444433333
Q ss_pred -----------------------cEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEE
Q 010748 376 -----------------------TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 432 (502)
Q Consensus 376 -----------------------~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vw 432 (502)
.|.+||+.+.. .....+..+...+.+++|+|++ ++|+++ ++.|++|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~--------~~~~~~~~~~~~~~~~~~s~dg-~~l~~~--~~~v~~~ 265 (337)
T 1pby_B 197 VMATPFYTARKDIDPADPTAYRTGLLTMDLETGE--------MAMREVRIMDVFYFSTAVNPAK-TRAFGA--YNVLESF 265 (337)
T ss_dssp EEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCC--------EEEEEEEECSSCEEEEEECTTS-SEEEEE--ESEEEEE
T ss_pred ceeeeeeccccccccccccccccceEEEeCCCCC--------ceEeecCCCCCceeeEEECCCC-CEEEEe--CCeEEEE
Confidence 46899998762 2244455677788999999998 777777 7899999
Q ss_pred ECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccc
Q 010748 433 DLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 433 d~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
|+.+++.. ..+.. ...+.+++|+|++++ |++++.++.|++||+.+++.+.++-
T Consensus 266 d~~~~~~~--~~~~~-~~~~~~~~~s~dg~~-l~~~~~~~~i~v~d~~~~~~~~~~~ 318 (337)
T 1pby_B 266 DLEKNASI--KRVPL-PHSYYSVNVSTDGST-VWLGGALGDLAAYDAETLEKKGQVD 318 (337)
T ss_dssp ETTTTEEE--EEEEC-SSCCCEEEECTTSCE-EEEESBSSEEEEEETTTCCEEEEEE
T ss_pred ECCCCcCc--ceecC-CCceeeEEECCCCCE-EEEEcCCCcEEEEECcCCcEEEEEE
Confidence 99988743 33332 245789999999995 6667889999999999998776553
No 144
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.87 E-value=8.7e-21 Score=202.68 Aligned_cols=290 Identities=9% Similarity=0.020 Sum_probs=187.0
Q ss_pred ccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCC--
Q 010748 141 DLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSME-- 218 (502)
Q Consensus 141 ~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~d-- 218 (502)
.+.+++|+|+|+++++ +.++ .|++|+...+....+..+|... ...+.+++| ||+|++||+++.+
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg-----~i~~~d~~~g~~~~~~~~~~~~-~~~v~~~~~-------SpDg~~l~~~~~~~~ 83 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKG-----TVRLWNVETNTSTVLIEGKKIE-SLRAIRYEI-------SPDREYALFSYNVEP 83 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSS-----CEEEBCGGGCCCEEEECTTTTT-TTTCSEEEE-------CTTSSEEEEEESCCC
T ss_pred cccccEEcCCCcEEEE-eCCC-----CEEEEECCCCcEEEEecccccc-ccccceEEE-------CCCCCEEEEEecCcc
Confidence 4678999999997765 4444 4555555444222333333211 001244555 8999999999764
Q ss_pred -------CcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcE
Q 010748 219 -------PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQV 291 (502)
Q Consensus 219 -------g~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v 291 (502)
+.|.+||+.++.. .. .....+|...+.+++|+|+| ..||+++. +.|
T Consensus 84 ~~~~~~~~~i~~~d~~~~~~-~~------------------------l~~~~~~~~~~~~~~~SPdG-~~la~~~~-~~i 136 (723)
T 1xfd_A 84 IYQHSYTGYYVLSKIPHGDP-QS------------------------LDPPEVSNAKLQYAGWGPKG-QQLIFIFE-NNI 136 (723)
T ss_dssp CSSSCCCSEEEEEESSSCCC-EE------------------------CCCTTCCSCCCSBCCBCSST-TCEEEEET-TEE
T ss_pred ceeecceeeEEEEECCCCce-Ee------------------------ccCCccccccccccEECCCC-CEEEEEEC-CeE
Confidence 7788999986442 10 11122466679999999995 57877776 799
Q ss_pred EEEeCCCCeeeEeeccCCCCe------------------EEEEEcCCCCcEEEEEeCCC---------------------
Q 010748 292 KIWDVAAGKCNLTLEHHTDKV------------------QAVAWNHHSPQILLSGSFDR--------------------- 332 (502)
Q Consensus 292 ~vwd~~~~~~~~~~~~h~~~v------------------~~l~~~~~~~~~l~s~s~dg--------------------- 332 (502)
++||+.+++.......+...+ .+++|+|+| +.|++++.++
T Consensus 137 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg-~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (723)
T 1xfd_A 137 YYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDG-TRLAYAAINDSRVPIMELPTYTGSIYPTVKP 215 (723)
T ss_dssp EEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTS-SEEEEEEEECTTSCEEEECCCSSSSSCCCEE
T ss_pred EEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCC-CEEEEEEECCCccceEEeeccCCcCCCccee
Confidence 999999988766655444333 789999999 7777776543
Q ss_pred -------------cEEEEecCCCCCccceEee------cCCeeEEEeCCCCCCEEEEEeC----CCcEEEEECCCCCCCC
Q 010748 333 -------------SVVMKDARISTHSGFKWAV------AADVESLAWDPHAEHSFVVSLE----DGTIKGFDIRTAKSDP 389 (502)
Q Consensus 333 -------------~i~iwd~~~~~~~~~~~~~------~~~v~~v~~~~~~~~~~~~~~~----dg~v~i~d~~~~~~~~ 389 (502)
.|++||+.++........+ ...+.+++|+|++. ++++... +..|++||+.++
T Consensus 216 ~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~i~~~d~~~g---- 290 (723)
T 1xfd_A 216 YHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTK-VAVTWLNRAQNVSILTLCDATTG---- 290 (723)
T ss_dssp EECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSE-EEEEEEETTSCEEEEEEEETTTC----
T ss_pred ccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCe-EEEEEEcCCCCeEEEEEEeCCCC----
Confidence 7999999887643222222 45688999999886 5544432 357999999876
Q ss_pred CCCCCccceEEe-ccCCCe----eEEEEcCCCCCEEEE-EeCCC------cEEEEE-CCCCCeeEEEEecCCCCcEEE-E
Q 010748 390 DSTSQQSSFTLH-AHDKAV----CTISYNPLVPNLLAT-GSTDK------MVKLWD-LSNNQPSCIASRNPKAGAVFS-V 455 (502)
Q Consensus 390 ~~~~~~~~~~~~-~h~~~v----~~l~~sp~~~~~l~t-~s~dg------~i~vwd-~~~~~~~~~~~~~~~~~~v~~-~ 455 (502)
.....+. .+...+ ..++|+|+|..++++ +..++ .|.+|| ...+...+...+..+...+.. +
T Consensus 291 -----~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~ 365 (723)
T 1xfd_A 291 -----VCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKIL 365 (723)
T ss_dssp -----CEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEE
T ss_pred -----cceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeee
Confidence 3333333 234444 388999999555554 55677 577777 344331012223333344554 6
Q ss_pred EEcCCCCcEEEEEeCC--CcEEEEECCCC
Q 010748 456 AFSEDSPFVLAIGGSK--GKLEIWDTLSD 482 (502)
Q Consensus 456 ~~spd~~~ll~sg~~d--g~i~vwd~~~~ 482 (502)
+|+|+++++++++..+ +.++||++...
T Consensus 366 ~~spdg~~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 366 AYDEKGNKIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp EEETTTTEEEEEESSSCTTCCEEEEECSS
T ss_pred EEcCCCCEEEEEEcCCCCcceEEEEEeCC
Confidence 9999999654555554 78999998653
No 145
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.87 E-value=2.1e-20 Score=181.46 Aligned_cols=240 Identities=13% Similarity=0.085 Sum_probs=177.9
Q ss_pred CCCCCEEEEecC-------CCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCC
Q 010748 206 REKGNFMAVGSM-------EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEF 278 (502)
Q Consensus 206 s~~~~~la~g~~-------dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~ 278 (502)
+|++++|++++. ++.|.+||+.++...... .....+.+++|+|++
T Consensus 49 s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~----------------------------~~~~~~~~~~~s~dg 100 (353)
T 3vgz_A 49 SQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAI----------------------------HNDLKPFGATINNTT 100 (353)
T ss_dssp ETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEE----------------------------EESSCCCSEEEETTT
T ss_pred CCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEE----------------------------ecCCCcceEEECCCC
Confidence 789998888774 468999998764332211 122347889999996
Q ss_pred CcEEEEEecCCcEEEEeCCCCeeeEeeccCCCC---------eEEEEEcCCCCcEEEEEe--CCCcEEEEecCCCCCccc
Q 010748 279 RNILASASADKQVKIWDVAAGKCNLTLEHHTDK---------VQAVAWNHHSPQILLSGS--FDRSVVMKDARISTHSGF 347 (502)
Q Consensus 279 ~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~---------v~~l~~~~~~~~~l~s~s--~dg~i~iwd~~~~~~~~~ 347 (502)
+.+++++..++.|.+||+.+++.+..+..+... +.++.|+|++ +.+++++ .++.|.+||+.+.+....
T Consensus 101 ~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~i~~~d~~~~~~~~~ 179 (353)
T 3vgz_A 101 QTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDAT-NTVYISGIGKESVIWVVDGGNIKLKTA 179 (353)
T ss_dssp TEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTT-TEEEEEEESSSCEEEEEETTTTEEEEE
T ss_pred CEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCC-CEEEEEecCCCceEEEEcCCCCceEEE
Confidence 656677777899999999999988888654432 7899999999 5555544 478999999988765543
Q ss_pred eEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEec----cCCCeeEEEEcCCCCCEEEEE
Q 010748 348 KWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA----HDKAVCTISYNPLVPNLLATG 423 (502)
Q Consensus 348 ~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~----h~~~v~~l~~sp~~~~~l~t~ 423 (502)
.......+.+++|+|++. .+++++.++.|.+||+.+. .....+.. +...+.+++|+|++..++++.
T Consensus 180 ~~~~~~~~~~~~~s~dg~-~l~~~~~~~~i~~~d~~~~---------~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 249 (353)
T 3vgz_A 180 IQNTGKMSTGLALDSEGK-RLYTTNADGELITIDTADN---------KILSRKKLLDDGKEHFFINISLDTARQRAFITD 249 (353)
T ss_dssp ECCCCTTCCCCEEETTTT-EEEEECTTSEEEEEETTTT---------EEEEEEECCCSSSCCCEEEEEEETTTTEEEEEE
T ss_pred ecCCCCccceEEECCCCC-EEEEEcCCCeEEEEECCCC---------eEEEEEEcCCCCCCcccceEEECCCCCEEEEEe
Confidence 322455688999999876 6788888999999999876 45555543 455688899999984444455
Q ss_pred eCCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010748 424 STDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 424 s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~ 488 (502)
..++.|.+||+.+++....... .. ..+++|+|++.+++++...++.|.+||+.+++.+...
T Consensus 250 ~~~~~v~~~d~~~~~~~~~~~~--~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~ 310 (353)
T 3vgz_A 250 SKAAEVLVVDTRNGNILAKVAA--PE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTF 310 (353)
T ss_dssp SSSSEEEEEETTTCCEEEEEEC--SS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEECCCCcEEEEEEc--CC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEE
Confidence 5569999999998874333332 22 2568999999976777667899999999988876543
No 146
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=5.9e-21 Score=190.82 Aligned_cols=250 Identities=15% Similarity=0.167 Sum_probs=169.1
Q ss_pred CCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEE--
Q 010748 206 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILA-- 283 (502)
Q Consensus 206 s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~-- 283 (502)
++++.+|++|+.++ |+||+........ ..+.. ..............|...|++++|+|++ ++|+
T Consensus 45 s~~~~~l~~~~~dg-v~v~~~~~~~~~~---~~~~~---------~~~~~~~~~~~~~~~~~~v~~l~~spdg-~~lav~ 110 (434)
T 2oit_A 45 SNKYGLVFAGGASG-LQIFPTKNLLIQN---KPGDD---------PNKIVDKVQGLLVPMKFPIHHLALSCDN-LTLSAC 110 (434)
T ss_dssp ETTTTEEEEEETTE-EEEEEHHHHCCCC---CTTCC---------TTCEEECCCCEEECCSSCEEEEEECTTS-CEEEEE
T ss_pred ecCCCEEEEECCCE-EEEEEchHhhhhc---ccccC---------cccccccCccccccCCCcccEEEEcCCC-CEEEEE
Confidence 67889999999888 8998764211100 00000 0000000001112466789999999994 5777
Q ss_pred --EEecCCcEEEEeCCCC--------e---eeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEe
Q 010748 284 --SASADKQVKIWDVAAG--------K---CNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA 350 (502)
Q Consensus 284 --sgs~dg~v~vwd~~~~--------~---~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 350 (502)
+|+.|++|+|||+.++ + .+..+.+|...|.+++|+|+.+.+|++++.||+|++||+++.........
T Consensus 111 ~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~ 190 (434)
T 2oit_A 111 MMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLP 190 (434)
T ss_dssp EEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEEC
T ss_pred EeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccC
Confidence 8889999999998764 2 24556779999999999998558999999999999999998755444455
Q ss_pred ecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEec-------cCCCeeEEEEcCCCCCEEEE-
Q 010748 351 VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA-------HDKAVCTISYNPLVPNLLAT- 422 (502)
Q Consensus 351 ~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~-------h~~~v~~l~~sp~~~~~l~t- 422 (502)
|...|.+++|+|++. +|++|+.||.|++||++ + .....+.. |...|.+++|++++ .++++
T Consensus 191 ~~~~v~~v~wspdg~-~lasgs~dg~v~iwd~~-~---------~~~~~~~~~~~~~~~~~~~v~~v~w~~~~-~~l~~~ 258 (434)
T 2oit_A 191 STVAVTSVCWSPKGK-QLAVGKQNGTVVQYLPT-L---------QEKKVIPCPPFYESDHPVRVLDVLWIGTY-VFAIVY 258 (434)
T ss_dssp GGGCEEEEEECTTSS-CEEEEETTSCEEEECTT-C---------CEEEEECCCTTCCTTSCEEEEEEEEEETT-EEEEEE
T ss_pred CCCceeEEEEcCCCC-EEEEEcCCCcEEEEccC-C---------cccccccCCcccCCCCceeEEEEEEecCc-eEEEEE
Confidence 778999999999865 79999999999999998 3 22333332 33489999999976 44433
Q ss_pred EeCCCc------EEEEECCCCC---eeEEEEec-------CCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010748 423 GSTDKM------VKLWDLSNNQ---PSCIASRN-------PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 423 ~s~dg~------i~vwd~~~~~---~~~~~~~~-------~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~ 481 (502)
++.+|. +++|+++... +.....+. ....+-..+.+.++...++++.+..+.|.|.....
T Consensus 259 ~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~~ 333 (434)
T 2oit_A 259 AAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQS 333 (434)
T ss_dssp EETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEECT
T ss_pred ccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEecC
Confidence 444543 8999998652 11112211 22233334445577776667666677788877543
No 147
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.87 E-value=4.1e-20 Score=198.04 Aligned_cols=289 Identities=13% Similarity=0.129 Sum_probs=195.2
Q ss_pred cccccccccCCCceEEEEEecCCcceeEEEEEecCCC---CCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010748 140 EDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDG---GDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~ 216 (502)
..+.+++|+|+|++|++++. + .||+|+.... ....+..| ...+.++.| ||+|++||+++
T Consensus 109 ~~v~~~~~SpDg~~l~~~~~-~-----~i~~~d~~~~~~~~~~~l~~~-----~~~~~~~~~-------SPDG~~la~~~ 170 (741)
T 2ecf_A 109 TGIVDYQWSPDAQRLLFPLG-G-----ELYLYDLKQEGKAAVRQLTHG-----EGFATDAKL-------SPKGGFVSFIR 170 (741)
T ss_dssp EESCCCEECTTSSEEEEEET-T-----EEEEEESSSCSTTSCCBCCCS-----SSCEEEEEE-------CTTSSEEEEEE
T ss_pred cCcceeEECCCCCEEEEEeC-C-----cEEEEECCCCCcceEEEcccC-----CcccccccC-------CCCCCEEEEEe
Confidence 45899999999999999885 3 6666665443 22222222 122355666 89999999987
Q ss_pred CCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCc--------ccceeeEEeccCCCcEEEEEecC
Q 010748 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSH--------TDSVLGLAWNKEFRNILASASAD 288 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h--------~~~V~~l~~~~~~~~~l~sgs~d 288 (502)
++.|++|++.++....... .+ . .....++ ...+.+++|+|++ .+|++++.|
T Consensus 171 -~~~i~~~d~~~g~~~~~~~--~~---------------~--~~~~~g~~~~v~~~~~~~~~~~~~SpDg-~~l~~~~~d 229 (741)
T 2ecf_A 171 -GRNLWVIDLASGRQMQLTA--DG---------------S--TTIGNGIAEFVADEEMDRHTGYWWAPDD-SAIAYARID 229 (741)
T ss_dssp -TTEEEEEETTTTEEEECCC--CC---------------C--SSEEESCCCHHHHHHSCCCCSEEECTTS-SCEEEEEEE
T ss_pred -CCcEEEEecCCCCEEEecc--CC---------------c--cceeccccceeeeeccccccceEECCCC-CEEEEEEEc
Confidence 4699999997643211000 00 0 0000011 1235889999995 577777766
Q ss_pred C---------------------------------cEEEEeCCC-CeeeEeec--cCCCCeEEEEEcCCCCcEEEEEeC--
Q 010748 289 K---------------------------------QVKIWDVAA-GKCNLTLE--HHTDKVQAVAWNHHSPQILLSGSF-- 330 (502)
Q Consensus 289 g---------------------------------~v~vwd~~~-~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~s~-- 330 (502)
+ .|++||+.+ ++...... .|...+.+++| |++ +.|++++.
T Consensus 230 ~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg-~~l~~~~~~~ 307 (741)
T 2ecf_A 230 ESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDP-QHLSFQRQSR 307 (741)
T ss_dssp CTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EET-TEEEEEEEET
T ss_pred CCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCC-CEEEEEEecc
Confidence 5 789999988 87654443 47788999999 999 66665543
Q ss_pred ---CCcEEEEecCCCCCccceEeecC----CeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEecc
Q 010748 331 ---DRSVVMKDARISTHSGFKWAVAA----DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH 403 (502)
Q Consensus 331 ---dg~i~iwd~~~~~~~~~~~~~~~----~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h 403 (502)
+..|.+||+.++........+.. .+..++|+|++. +++++..+|.+++|.+... .. ...+..|
T Consensus 308 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~--------~~-~~~l~~~ 377 (741)
T 2ecf_A 308 DQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTGFQHLYRIDSK--------GK-AAALTHG 377 (741)
T ss_dssp TSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTTSSCEEEEECSS--------SC-EEESCCS
T ss_pred cCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCCCccEEEEEcCC--------CC-eeeeeec
Confidence 56899999998776554333332 356899999987 8888899998888877633 24 6667778
Q ss_pred CCCeeEE-EEcCCCCCEEEEEeCCC--cEEEEECCC-CCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCC---CcEEE
Q 010748 404 DKAVCTI-SYNPLVPNLLATGSTDK--MVKLWDLSN-NQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSK---GKLEI 476 (502)
Q Consensus 404 ~~~v~~l-~~sp~~~~~l~t~s~dg--~i~vwd~~~-~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~d---g~i~v 476 (502)
...+..+ .|+|++..++++++.++ .++||++.. +. ....+.. ...+.+++|+|++++++++.+.. ..+.+
T Consensus 378 ~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~--~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l 454 (741)
T 2ecf_A 378 NWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGG--QPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIEL 454 (741)
T ss_dssp SSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCC--CCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEE
T ss_pred ceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCC--Ceeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEE
Confidence 8888887 59999844445666665 899998864 32 2233333 56688999999999755555443 46889
Q ss_pred EECCCC
Q 010748 477 WDTLSD 482 (502)
Q Consensus 477 wd~~~~ 482 (502)
|+...+
T Consensus 455 ~~~~~~ 460 (741)
T 2ecf_A 455 FRANGE 460 (741)
T ss_dssp EETTSC
T ss_pred EEcCCC
Confidence 987543
No 148
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.86 E-value=1.1e-19 Score=175.86 Aligned_cols=248 Identities=11% Similarity=0.047 Sum_probs=171.0
Q ss_pred CCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEE
Q 010748 203 LKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNIL 282 (502)
Q Consensus 203 ~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l 282 (502)
+++++++.++++++.++.|++||+.++...... ..++...+..++|+|++..++
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~--------------------------~~~~~~~~~~~~~s~dg~~~~ 58 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSC--------------------------VMPDKFGPGTAMMAPDNRTAY 58 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEE--------------------------ECSSCCSSCEEEECTTSSEEE
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEE--------------------------ecCCCCCCceeEECCCCCEEE
Confidence 344788999999999999999999764322110 001112577899999965556
Q ss_pred EEEecCCcEEEEeCCCCeeeEeeccCC------CCeEEEEEcCCCCcEEEEEeCC------------CcEEEEecCCCCC
Q 010748 283 ASASADKQVKIWDVAAGKCNLTLEHHT------DKVQAVAWNHHSPQILLSGSFD------------RSVVMKDARISTH 344 (502)
Q Consensus 283 ~sgs~dg~v~vwd~~~~~~~~~~~~h~------~~v~~l~~~~~~~~~l~s~s~d------------g~i~iwd~~~~~~ 344 (502)
+++..++.|.+||+.+++.+..+..+. ..+.+++|+|++ ++|++++.+ +.|.+||+.+.+.
T Consensus 59 v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 137 (349)
T 1jmx_B 59 VLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDG-KEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE 137 (349)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG
T ss_pred EEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCC-CEEEEEcccccccccccccCCCeEEEEECCCccc
Confidence 677778999999999998887775332 237889999999 777777754 8999999987443
Q ss_pred cc--ceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCc-------------------------c-
Q 010748 345 SG--FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQ-------------------------S- 396 (502)
Q Consensus 345 ~~--~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~-------------------------~- 396 (502)
.. ....+...+.+++|+|++. +++ ++ +.|++||+.++.......... .
T Consensus 138 ~~~~~~~~~~~~~~~~~~s~dg~-l~~-~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (349)
T 1jmx_B 138 AKPVRTFPMPRQVYLMRAADDGS-LYV-AG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSML 213 (349)
T ss_dssp BCCSEEEECCSSCCCEEECTTSC-EEE-ES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEE
T ss_pred cceeeeccCCCcccceeECCCCc-EEE-cc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEee
Confidence 22 2334455788999999886 444 43 349999998763210000000 0
Q ss_pred ---------------------------------ceEEeccCCCeeEEEEcC-CCCCEEEEEeCCCcEEEEECCCCCeeEE
Q 010748 397 ---------------------------------SFTLHAHDKAVCTISYNP-LVPNLLATGSTDKMVKLWDLSNNQPSCI 442 (502)
Q Consensus 397 ---------------------------------~~~~~~h~~~v~~l~~sp-~~~~~l~t~s~dg~i~vwd~~~~~~~~~ 442 (502)
...+..+...+.+++|+| ++ ++|+++ ++.|.+||+.+++..
T Consensus 214 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg-~~l~~~--~~~v~~~d~~~~~~~-- 288 (349)
T 1jmx_B 214 YTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDP-NQIYGV--LNRLAKYDLKQRKLI-- 288 (349)
T ss_dssp EEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCT-TEEEEE--ESEEEEEETTTTEEE--
T ss_pred eeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCC-CEEEEE--cCeEEEEECccCeEE--
Confidence 000001123466788889 87 777777 889999999988743
Q ss_pred EEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010748 443 ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 443 ~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~ 488 (502)
..+.. ...+.+++|+|++.+ |++++.++.|++||+.+++.+.+.
T Consensus 289 ~~~~~-~~~~~~~~~s~dg~~-l~~~~~~~~v~v~d~~~~~~~~~~ 332 (349)
T 1jmx_B 289 KAANL-DHTYYCVAFDKKGDK-LYLGGTFNDLAVFNPDTLEKVKNI 332 (349)
T ss_dssp EEEEC-SSCCCEEEECSSSSC-EEEESBSSEEEEEETTTTEEEEEE
T ss_pred EEEcC-CCCccceEECCCCCE-EEEecCCCeEEEEeccccceeeee
Confidence 33322 234678999999986 555788899999999998877654
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.86 E-value=7.5e-20 Score=203.19 Aligned_cols=290 Identities=12% Similarity=0.109 Sum_probs=211.0
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010748 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~ 216 (502)
.|...+.++.|+|+ .+++++..++ ...||.++........+ .+|. .+ .+..| +|+|++||++.
T Consensus 201 ~~~~~v~~~~~s~d-~l~~~~~~dg---~~~l~~~~~~g~~~~~l-~~~~----~~-~~~~~-------SpDG~~la~~~ 263 (1045)
T 1k32_A 201 DMSTHVSSPVIVGH-RIYFITDIDG---FGQIYSTDLDGKDLRKH-TSFT----DY-YPRHL-------NTDGRRILFSK 263 (1045)
T ss_dssp CCSSCCEEEEEETT-EEEEEECTTS---SCEEEEEETTSCSCEEC-CCCC----SS-CEEEE-------EESSSCEEEEE
T ss_pred CCCCcccceEEeCC-EEEEEEeccC---ceEEEEEeCCCCcceEe-cCCC----Cc-ceeeE-------cCCCCEEEEEe
Confidence 46778899999988 5555554433 56899988654311122 2221 11 23344 79999999884
Q ss_pred CCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEec-cCCCcEEEEEecCCcEEEEe
Q 010748 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWN-KEFRNILASASADKQVKIWD 295 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~-~~~~~~l~sgs~dg~v~vwd 295 (502)
++.|++|++... .+. .+.+. ..........|...|.+++|+ |+ +.+|++++ ++.|++|+
T Consensus 264 -~~~i~~~d~~~~-~l~---~l~~~-------------~~~~~~~~~~~~~~v~~~~~S~pd-G~~la~~~-~~~i~~~~ 323 (1045)
T 1k32_A 264 -GGSIYIFNPDTE-KIE---KIEIG-------------DLESPEDRIISIPSKFAEDFSPLD-GDLIAFVS-RGQAFIQD 323 (1045)
T ss_dssp -TTEEEEECTTTC-CEE---ECCCC-------------CCCBCCSEEEECGGGGEEEEEECG-GGCEEEEE-TTEEEEEC
T ss_pred -CCEEEEecCCce-Eee---eeccC-------------cccccccccccccccceeeecCCC-CCEEEEEE-cCEEEEEc
Confidence 899999998321 111 11110 000111122466789999999 99 45777776 78999999
Q ss_pred CCCCeeeEeeccCCC-CeEEEEEcCCCCcEEEEEeCCCcEE-EEecCCCCCccceEeecCCeeEEEeCCCCCCEEEEEeC
Q 010748 296 VAAGKCNLTLEHHTD-KVQAVAWNHHSPQILLSGSFDRSVV-MKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE 373 (502)
Q Consensus 296 ~~~~~~~~~~~~h~~-~v~~l~~~~~~~~~l~s~s~dg~i~-iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~ 373 (502)
+.+++.. .+..|.. .+.+++|+ ++ ..|++++.++.+. +|++.+....... .+...+..++|+|++. .+++++.
T Consensus 324 ~~~~~~~-~~~~~~~~~~~~~~~s-dg-~~l~~~s~~~~l~~~~d~~~~~~~~l~-~~~~~~~~~~~SpDG~-~la~~~~ 398 (1045)
T 1k32_A 324 VSGTYVL-KVPEPLRIRYVRRGGD-TK-VAFIHGTREGDFLGIYDYRTGKAEKFE-ENLGNVFAMGVDRNGK-FAVVAND 398 (1045)
T ss_dssp TTSSBEE-ECSCCSCEEEEEECSS-SE-EEEEEEETTEEEEEEEETTTCCEEECC-CCCCSEEEEEECTTSS-EEEEEET
T ss_pred CCCCceE-EccCCCcceEEeeeEc-CC-CeEEEEECCCceEEEEECCCCCceEec-CCccceeeeEECCCCC-EEEEECC
Confidence 9887654 4666777 89999999 87 7888888888888 9998876544433 5667899999999876 7888899
Q ss_pred CCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCC----------cEEEEECCCCCeeEEE
Q 010748 374 DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK----------MVKLWDLSNNQPSCIA 443 (502)
Q Consensus 374 dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg----------~i~vwd~~~~~~~~~~ 443 (502)
++.|++||+.++ ........|...+.+++|+|++ ++|++++.++ .|++||+.+++ ..
T Consensus 399 ~~~v~~~d~~tg---------~~~~~~~~~~~~v~~~~~SpDG-~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~---~~ 465 (1045)
T 1k32_A 399 RFEIMTVDLETG---------KPTVIERSREAMITDFTISDNS-RFIAYGFPLKHGETDGYVMQAIHVYDMEGRK---IF 465 (1045)
T ss_dssp TSEEEEEETTTC---------CEEEEEECSSSCCCCEEECTTS-CEEEEEEEECSSTTCSCCEEEEEEEETTTTE---EE
T ss_pred CCeEEEEECCCC---------ceEEeccCCCCCccceEECCCC-CeEEEEecCccccccCCCCCeEEEEECCCCc---EE
Confidence 999999999876 4455556799999999999998 7777776644 89999998875 45
Q ss_pred EecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCC
Q 010748 444 SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 444 ~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~ 482 (502)
.+..|...+.+++|+|+|++ |++++.++...+|+....
T Consensus 466 ~l~~~~~~~~~~~~spdG~~-l~~~s~~~~~~~~~~~~~ 503 (1045)
T 1k32_A 466 AATTENSHDYAPAFDADSKN-LYYLSYRSLDPSPDRVVL 503 (1045)
T ss_dssp ECSCSSSBEEEEEECTTSCE-EEEEESCCCCCEECSSSS
T ss_pred EeeCCCcccCCceEcCCCCE-EEEEecccCCcCcchhcc
Confidence 66677888999999999995 777888888888886543
No 150
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.85 E-value=8.9e-20 Score=202.56 Aligned_cols=286 Identities=10% Similarity=0.013 Sum_probs=202.8
Q ss_pred cccccccccc-CCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC
Q 010748 139 SEDLEDMTIN-PNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM 217 (502)
Q Consensus 139 ~~~v~~~~~~-p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~ 217 (502)
...+.++.|+ |+|+.|++++ .+ .||+++........+..|... ...++. |+ +|+.|++++.
T Consensus 295 ~~~v~~~~~S~pdG~~la~~~-~~-----~i~~~~~~~~~~~~~~~~~~~----~~~~~~-------~s-dg~~l~~~s~ 356 (1045)
T 1k32_A 295 IPSKFAEDFSPLDGDLIAFVS-RG-----QAFIQDVSGTYVLKVPEPLRI----RYVRRG-------GD-TKVAFIHGTR 356 (1045)
T ss_dssp CGGGGEEEEEECGGGCEEEEE-TT-----EEEEECTTSSBEEECSCCSCE----EEEEEC-------SS-SEEEEEEEET
T ss_pred ccccceeeecCCCCCEEEEEE-cC-----EEEEEcCCCCceEEccCCCcc----eEEeee-------Ec-CCCeEEEEEC
Confidence 4478999999 9999999987 33 677777554311111111110 122333 48 9999999988
Q ss_pred CCcEE-EeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeC
Q 010748 218 EPAIE-IWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV 296 (502)
Q Consensus 218 dg~I~-iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~ 296 (502)
++.|. +|++..... . .+.+|...+.+++|+|+ +.+|++++.++.|++||+
T Consensus 357 ~~~l~~~~d~~~~~~---------------------------~-~l~~~~~~~~~~~~SpD-G~~la~~~~~~~v~~~d~ 407 (1045)
T 1k32_A 357 EGDFLGIYDYRTGKA---------------------------E-KFEENLGNVFAMGVDRN-GKFAVVANDRFEIMTVDL 407 (1045)
T ss_dssp TEEEEEEEETTTCCE---------------------------E-ECCCCCCSEEEEEECTT-SSEEEEEETTSEEEEEET
T ss_pred CCceEEEEECCCCCc---------------------------e-EecCCccceeeeEECCC-CCEEEEECCCCeEEEEEC
Confidence 88888 888864211 1 12267788999999999 568999999999999999
Q ss_pred CCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCC----------CcEEEEecCCCCCccceEeecCCeeEEEeCCCCCC
Q 010748 297 AAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD----------RSVVMKDARISTHSGFKWAVAADVESLAWDPHAEH 366 (502)
Q Consensus 297 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~d----------g~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~ 366 (502)
.+++....+..|...+.+++|+|++ ++|++++.+ +.|++||+.++. ......+...+.+++|+|++.
T Consensus 408 ~tg~~~~~~~~~~~~v~~~~~SpDG-~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~- 484 (1045)
T 1k32_A 408 ETGKPTVIERSREAMITDFTISDNS-RFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSK- 484 (1045)
T ss_dssp TTCCEEEEEECSSSCCCCEEECTTS-CEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSC-
T ss_pred CCCceEEeccCCCCCccceEECCCC-CeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCC-
Confidence 9999888877899999999999999 777777654 489999998865 333445566788899999887
Q ss_pred EEEEEeCCCcEEEEECCCCCCCC---------------------------------CC-CCCccceEEeccCCCeeEEEE
Q 010748 367 SFVVSLEDGTIKGFDIRTAKSDP---------------------------------DS-TSQQSSFTLHAHDKAVCTISY 412 (502)
Q Consensus 367 ~~~~~~~dg~v~i~d~~~~~~~~---------------------------------~~-~~~~~~~~~~~h~~~v~~l~~ 412 (502)
.+++++.++....|+........ .. .....+..+..|.+.+..+++
T Consensus 485 ~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~ 564 (1045)
T 1k32_A 485 NLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIP 564 (1045)
T ss_dssp EEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEE
T ss_pred EEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEE
Confidence 67777777776777654321100 00 001123455567788999999
Q ss_pred cCCCCCEEEE-------------EeCCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEEC
Q 010748 413 NPLVPNLLAT-------------GSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 479 (502)
Q Consensus 413 sp~~~~~l~t-------------~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~ 479 (502)
+|++ .++++ ......|.+||+.+++...+. ..+.+++|+|||++ |++++.+ .|++||+
T Consensus 565 s~dg-~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l~------~~v~~~~~S~DG~~-l~~~~~~-~i~~~d~ 635 (1045)
T 1k32_A 565 LESS-ILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVK------NNLTDLRLSADRKT-VMVRKDD-GKIYTFP 635 (1045)
T ss_dssp CSSE-EEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEE------EEEEEEEECTTSCE-EEEEETT-SCEEEEE
T ss_pred cCCC-eEEEEecccCcccccccccCCCceEEEEECCCCcEEEee------cCcceEEECCCCCE-EEEEcCC-cEEEEeC
Confidence 9987 66664 123457889999888743222 55889999999996 6666655 8999999
Q ss_pred CCCc
Q 010748 480 LSDA 483 (502)
Q Consensus 480 ~~~~ 483 (502)
.+++
T Consensus 636 ~~~~ 639 (1045)
T 1k32_A 636 LEKP 639 (1045)
T ss_dssp SSCT
T ss_pred ccCc
Confidence 8876
No 151
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.85 E-value=2.1e-19 Score=191.97 Aligned_cols=306 Identities=13% Similarity=0.090 Sum_probs=186.1
Q ss_pred ccccccccCCCceEEEEEecCCcc----eeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010748 141 DLEDMTINPNDAVIVCARNEDDVS----HLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 141 ~v~~~~~~p~~~~l~~~~~~~~~~----~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~ 216 (502)
.|.+++|+|+|++|++++.+.... .-.+|+|+...+....+.. .. .....+.+ ++|||+|++||.++
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~-~~-~~~~~~~~-------~~~SPdG~~la~~~ 132 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDP-PE-VSNAKLQY-------AGWGPKGQQLIFIF 132 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCC-TT-CCSCCCSB-------CCBCSSTTCEEEEE
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccC-Cc-cccccccc-------cEECCCCCEEEEEE
Confidence 489999999999999997654221 1256666655441101111 10 00011223 34499999999998
Q ss_pred CCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcc---------cceeeEEeccCCCcEEEEEec
Q 010748 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHT---------DSVLGLAWNKEFRNILASASA 287 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~---------~~V~~l~~~~~~~~~l~sgs~ 287 (502)
. +.|++|++.++..... ... ......+.++. ..+.+++|+|++ ..|++++.
T Consensus 133 ~-~~i~~~~~~~g~~~~~---~~~---------------~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg-~~la~~~~ 192 (723)
T 1xfd_A 133 E-NNIYYCAHVGKQAIRV---VST---------------GKEGVIYNGLSDWLYEEEILKTHIAHWWSPDG-TRLAYAAI 192 (723)
T ss_dssp T-TEEEEESSSSSCCEEE---ECC---------------CBTTTEEEEECCHHHHHTTSSSSEEEEECTTS-SEEEEEEE
T ss_pred C-CeEEEEECCCCceEEE---ecC---------------CCCCceECcccceeEEEEeccCcceEEECCCC-CEEEEEEE
Confidence 6 7999999986543211 000 00000011111 134789999995 57777765
Q ss_pred CC----------------------------------cEEEEeCCCCeeeEeeccC------CCCeEEEEEcCCCCcEEEE
Q 010748 288 DK----------------------------------QVKIWDVAAGKCNLTLEHH------TDKVQAVAWNHHSPQILLS 327 (502)
Q Consensus 288 dg----------------------------------~v~vwd~~~~~~~~~~~~h------~~~v~~l~~~~~~~~~l~s 327 (502)
++ .|++||+.++++...+..+ ...+.+++|+|++ ++|++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg-~~l~~ 271 (723)
T 1xfd_A 193 NDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATST-KVAVT 271 (723)
T ss_dssp ECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSS-EEEEE
T ss_pred CCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCC-eEEEE
Confidence 43 7999999988866666544 5678999999999 67766
Q ss_pred EeC----CCcEEEEecCCCCCccceEee-cCCe----eEEEeCCCCCCEEEE-EeCCC------cEEEEEC-CCCCCCCC
Q 010748 328 GSF----DRSVVMKDARISTHSGFKWAV-AADV----ESLAWDPHAEHSFVV-SLEDG------TIKGFDI-RTAKSDPD 390 (502)
Q Consensus 328 ~s~----dg~i~iwd~~~~~~~~~~~~~-~~~v----~~v~~~~~~~~~~~~-~~~dg------~v~i~d~-~~~~~~~~ 390 (502)
.+. +..|.+||+.+++........ ...+ ..++|+|++..++++ +..++ .|++||+ .....
T Consensus 272 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~--- 348 (723)
T 1xfd_A 272 WLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSN--- 348 (723)
T ss_dssp EEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSS---
T ss_pred EEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCc---
Confidence 543 357999999887755433322 3333 378999998876665 56677 5677773 33210
Q ss_pred CCCCccceEEeccCCCeeE-EEEcCCCCCEEEEEeC-C--CcEEEEECCCCCeeEEEEecC---CCCcEEEEEEcCCCCc
Q 010748 391 STSQQSSFTLHAHDKAVCT-ISYNPLVPNLLATGST-D--KMVKLWDLSNNQPSCIASRNP---KAGAVFSVAFSEDSPF 463 (502)
Q Consensus 391 ~~~~~~~~~~~~h~~~v~~-l~~sp~~~~~l~t~s~-d--g~i~vwd~~~~~~~~~~~~~~---~~~~v~~~~~spd~~~ 463 (502)
.+...+..+...+.. ++|+|++ +.|+..+. + +.++||++..........+.. |...+..++|+|++++
T Consensus 349 ----~~~~~l~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~ 423 (723)
T 1xfd_A 349 ----DNIQSITSGDWDVTKILAYDEKG-NKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDF 423 (723)
T ss_dssp ----CCCCBSCCSSSCEEEEEEEETTT-TEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSE
T ss_pred ----cceeEeecCCeEEEeeeEEcCCC-CEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCE
Confidence 012333333344544 6999998 66655544 4 789999986532111222222 5567889999999997
Q ss_pred EEEEEeCCC--cEEEEECCCCcc
Q 010748 464 VLAIGGSKG--KLEIWDTLSDAG 484 (502)
Q Consensus 464 ll~sg~~dg--~i~vwd~~~~~~ 484 (502)
++++.+..+ ...+++..++..
T Consensus 424 l~~~~~~~~~p~~~~~~~~~~~~ 446 (723)
T 1xfd_A 424 FLLKCEGPGVPMVTVHNTTDKKK 446 (723)
T ss_dssp EEEECCSSSSCCEEEEETTTCCE
T ss_pred EEEEccCCCCCeEEEEECCCCCE
Confidence 665554443 334456544443
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.83 E-value=7.3e-19 Score=187.29 Aligned_cols=281 Identities=10% Similarity=0.090 Sum_probs=185.4
Q ss_pred ccccccccCCCceEEEEEecCCcceeEEEEEecCCCCC--CCeeeeecccc------------CCCcceeeeecCCCCCC
Q 010748 141 DLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGD--PNLYVHHHIII------------PAFPLCMAWLDCPLKDR 206 (502)
Q Consensus 141 ~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~--~~l~~~~~~~~------------~~~~~~~~~~~~~~~~s 206 (502)
.+..+.|. +..++.++.++ + +|+...+.. ..+..++.... ...+.+++| |
T Consensus 27 ~~~~~~w~--g~~~~~~~~~~----i---~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~-------s 90 (706)
T 2z3z_A 27 YVVGLQWM--GDNYVFIEGDD----L---VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLD-------A 90 (706)
T ss_dssp -CTTCEEE--TTEEEEEETTE----E---EEEC-------CEEEEHHHHHTTC-----------CCCEEEEE-------T
T ss_pred cCCCCcCc--CCeEEEEeCCc----E---EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEE-------C
Confidence 46678888 55666665432 4 444444333 34444442210 012345555 8
Q ss_pred CCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEe
Q 010748 207 EKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS 286 (502)
Q Consensus 207 ~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs 286 (502)
|+ ++++.+. ++.|++||+.++... .+..+...+.+++|+|++ ..|+++
T Consensus 91 pd-~~~~~~~-~~~i~~~d~~~~~~~----------------------------~l~~~~~~~~~~~~SpdG-~~la~~- 138 (706)
T 2z3z_A 91 GR-GLVVLFT-QGGLVGFDMLARKVT----------------------------YLFDTNEETASLDFSPVG-DRVAYV- 138 (706)
T ss_dssp TT-TEEEEEE-TTEEEEEETTTTEEE----------------------------EEECCTTCCTTCEECTTS-SEEEEE-
T ss_pred CC-CeEEEEE-CCEEEEEECCCCceE----------------------------EccCCcccccCCcCCCCC-CEEEEE-
Confidence 89 6665553 599999999753211 122356678999999995 577774
Q ss_pred cCCcEEEEeCCC-----CeeeEeeccCCCC--------------eEEEEEcCCCCcEEEEEe------------------
Q 010748 287 ADKQVKIWDVAA-----GKCNLTLEHHTDK--------------VQAVAWNHHSPQILLSGS------------------ 329 (502)
Q Consensus 287 ~dg~v~vwd~~~-----~~~~~~~~~h~~~--------------v~~l~~~~~~~~~l~s~s------------------ 329 (502)
.++.|++|++.+ ++.......+... +.++.|+|++ ++|++++
T Consensus 139 ~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg-~~la~~~~d~~~~~~~~~~~~~~~~ 217 (706)
T 2z3z_A 139 RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG-SCLAFYRMDQSMVKPTPIVDYHPLE 217 (706)
T ss_dssp ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS-SEEEEEEEECTTSCCEEEEECCSSS
T ss_pred ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCC-CEEEEEEECCCCCceEEeeccCCCC
Confidence 679999999998 7766544433332 4899999999 7788777
Q ss_pred ---------------CCCcEEEEecCCCCCccceE--eecCCeeEEEeCCCCCCEEEEEeCCC-----cEEEEECCCCCC
Q 010748 330 ---------------FDRSVVMKDARISTHSGFKW--AVAADVESLAWDPHAEHSFVVSLEDG-----TIKGFDIRTAKS 387 (502)
Q Consensus 330 ---------------~dg~i~iwd~~~~~~~~~~~--~~~~~v~~v~~~~~~~~~~~~~~~dg-----~v~i~d~~~~~~ 387 (502)
.+..|.+||+.++....... .+...+.+++|+|++. .+++++.++ .|++||+.++
T Consensus 218 ~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~~v~~~d~~~g-- 294 (706)
T 2z3z_A 218 AESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDEN-ILYVAEVNRAQNECKVNAYDAETG-- 294 (706)
T ss_dssp CEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSS-EEEEEEECTTSCEEEEEEEETTTC--
T ss_pred CceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCC-EEEEEEeCCCCCeeEEEEEECCCC--
Confidence 44789999998776433222 2345689999999876 566655554 8999999875
Q ss_pred CCCCCCCccceEEe--ccCC---CeeEEEEcC--CCCCEEEEEeCCCcEEEEECC-CCCeeEEEEecCCCCcEEE-EEEc
Q 010748 388 DPDSTSQQSSFTLH--AHDK---AVCTISYNP--LVPNLLATGSTDKMVKLWDLS-NNQPSCIASRNPKAGAVFS-VAFS 458 (502)
Q Consensus 388 ~~~~~~~~~~~~~~--~h~~---~v~~l~~sp--~~~~~l~t~s~dg~i~vwd~~-~~~~~~~~~~~~~~~~v~~-~~~s 458 (502)
.....+. .+.. .+.+++|+| ++ .+|++++.++.++||.+. ++. .+..+..+...+.+ ++|+
T Consensus 295 -------~~~~~~~~~~~~~~~~~~~~~~~sp~~dg-~~l~~~~~~g~~~l~~~~~~~~--~~~~l~~~~~~v~~~~~~s 364 (706)
T 2z3z_A 295 -------RFVRTLFVETDKHYVEPLHPLTFLPGSNN-QFIWQSRRDGWNHLYLYDTTGR--LIRQVTKGEWEVTNFAGFD 364 (706)
T ss_dssp -------CEEEEEEEEECSSCCCCCSCCEECTTCSS-EEEEEECTTSSCEEEEEETTSC--EEEECCCSSSCEEEEEEEC
T ss_pred -------ceeeEEEEccCCCeECccCCceeecCCCC-EEEEEEccCCccEEEEEECCCC--EEEecCCCCeEEEeeeEEc
Confidence 1222222 2222 347789999 88 789999999999999876 343 45556667777876 7999
Q ss_pred CCCCcEEEEEeCCC----cEEEEECCCCc
Q 010748 459 EDSPFVLAIGGSKG----KLEIWDTLSDA 483 (502)
Q Consensus 459 pd~~~ll~sg~~dg----~i~vwd~~~~~ 483 (502)
|+++.++++++.++ .|..|++.++.
T Consensus 365 pdg~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 365 PKGTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp TTSSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred CCCCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 99997666666665 67777777654
No 153
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.83 E-value=5.2e-19 Score=184.08 Aligned_cols=274 Identities=8% Similarity=0.019 Sum_probs=187.5
Q ss_pred ccccccccccCCCceEEEEEe-cCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC
Q 010748 139 SEDLEDMTINPNDAVIVCARN-EDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM 217 (502)
Q Consensus 139 ~~~v~~~~~~p~~~~l~~~~~-~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~ 217 (502)
...|.++.|+|||+.||.++. ++ .++||.++.+.. ..+..|+... ...+ .|+|+ +++++++.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g---~~~lw~~~~g~~--~~lt~~~~~~----~~~~-------~~spd-~~l~~~~~ 83 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEG---SVNAYLYDGGET--VKLNREPINS----VLDP-------HYGVG-RVILVRDV 83 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETT---EEEEEEEETTEE--EECCSSCCSE----ECEE-------CTTCS-EEEEEEEC
T ss_pred ccchheeecCCCCCeEEEEEccCC---ceeEEEEcCCCc--Eeeecccccc----cccc-------cCCCC-eEEEEecc
Confidence 346899999999999999886 44 678998754321 1111222111 1233 34888 77777765
Q ss_pred ---CCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEE
Q 010748 218 ---EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIW 294 (502)
Q Consensus 218 ---dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vw 294 (502)
+...+||.++..+.-. .. .+. ....+...+|+|++..++++.+.++.+.+|
T Consensus 84 ~~g~~~~~l~~~~~~~~g~----------------------~~---~l~-~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~ 137 (582)
T 3o4h_A 84 SKGAEQHALFKVNTSRPGE----------------------EQ---RLE-AVKPMRILSGVDTGEAVVFTGATEDRVALY 137 (582)
T ss_dssp STTSCCEEEEEEETTSTTC----------------------CE---ECT-TSCSBEEEEEEECSSCEEEEEECSSCEEEE
T ss_pred CCCCcceEEEEEeccCCCc----------------------cc---ccc-CCCCceeeeeCCCCCeEEEEecCCCCceEE
Confidence 4566777664310000 00 000 111233567888865555555555556699
Q ss_pred eCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCC----CcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEEEE
Q 010748 295 DVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD----RSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVV 370 (502)
Q Consensus 295 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~d----g~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~ 370 (502)
|+.++++......+. .+++|+|+| ++|++++.+ +.|++||+.++.... ...+...+..++|+|+|. .+++
T Consensus 138 d~~~g~~~~l~~~~~---~~~~~spDG-~~la~~~~~~~~~~~i~~~d~~~g~~~~-l~~~~~~~~~~~~SpDG~-~l~~ 211 (582)
T 3o4h_A 138 ALDGGGLRELARLPG---FGFVSDIRG-DLIAGLGFFGGGRVSLFTSNLSSGGLRV-FDSGEGSFSSASISPGMK-VTAG 211 (582)
T ss_dssp EEETTEEEEEEEESS---CEEEEEEET-TEEEEEEEEETTEEEEEEEETTTCCCEE-ECCSSCEEEEEEECTTSC-EEEE
T ss_pred EccCCcEEEeecCCC---ceEEECCCC-CEEEEEEEcCCCCeEEEEEcCCCCCceE-eecCCCccccceECCCCC-EEEE
Confidence 999987765554333 789999999 888877776 789999998877553 455667789999999987 5667
Q ss_pred EeCCC--cEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEE--------EcCCCCCEEEEEeCCCcEEEEECCCCCee
Q 010748 371 SLEDG--TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTIS--------YNPLVPNLLATGSTDKMVKLWDLSNNQPS 440 (502)
Q Consensus 371 ~~~dg--~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~--------~sp~~~~~l~t~s~dg~i~vwd~~~~~~~ 440 (502)
+..+| .|++||+.++ ... .+..|...+..++ |+|++ .++++++.++.+++|++ ++.
T Consensus 212 ~~~~~~~~i~~~d~~~~---------~~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~--g~~- 277 (582)
T 3o4h_A 212 LETAREARLVTVDPRDG---------SVE-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID--GER- 277 (582)
T ss_dssp EECSSCEEEEEECTTTC---------CEE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET--TEE-
T ss_pred ccCCCeeEEEEEcCCCC---------cEE-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE--CCe-
Confidence 78888 8999999876 333 5667777777777 99999 99999999999999999 542
Q ss_pred EEEEecCCCCcEEEEEEcCCCCcEEEEEeCCC---cEEEEECCC
Q 010748 441 CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKG---KLEIWDTLS 481 (502)
Q Consensus 441 ~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg---~i~vwd~~~ 481 (502)
.. ...+.|.+++|+ ++. ++++++.+. .+.+|++.+
T Consensus 278 -~~---~~~~~v~~~~~s-dg~-~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 278 -VE---APQGNHGRVVLW-RGK-LVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp -EC---CCSSEEEEEEEE-TTE-EEEEEEETTEEEEEEEETTCC
T ss_pred -ec---cCCCceEEEEec-CCE-EEEEEcCCCCCCeEEEEcCCC
Confidence 22 334779999999 887 466666664 466666643
No 154
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.82 E-value=1.7e-17 Score=160.87 Aligned_cols=267 Identities=9% Similarity=0.140 Sum_probs=167.4
Q ss_pred cccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec-CC
Q 010748 140 EDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS-ME 218 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~-~d 218 (502)
.....++|+|+++ |++++..+....+.+|..+.... ... .........|.+++| +|+|++|++++ .+
T Consensus 40 ~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~---~~~-~~~~~~~~~p~~~a~-------spdg~~l~~~~~~~ 107 (347)
T 3hfq_A 40 QNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTA---HKL-NTVVAPGTPPAYVAV-------DEARQLVYSANYHK 107 (347)
T ss_dssp SCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEE---EEE-EEEEEESCCCSEEEE-------ETTTTEEEEEETTT
T ss_pred CCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcE---EEe-eeeecCCCCCEEEEE-------CCCCCEEEEEeCCC
Confidence 4567899999999 55555432223455555533221 111 111112344566666 79999888887 67
Q ss_pred CcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeCC-
Q 010748 219 PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVA- 297 (502)
Q Consensus 219 g~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~- 297 (502)
+.|.+|++...........+.. .. .... ...+...+.+++|+|++. +++++..++.|.+|++.
T Consensus 108 ~~v~v~~~~~~g~~~~~~~~~~-----------~~--~~p~--~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~ 171 (347)
T 3hfq_A 108 GTAEVMKIAADGALTLTDTVQH-----------SG--HGPR--PEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSD 171 (347)
T ss_dssp TEEEEEEECTTSCEEEEEEEEC-----------CC--CCSS--TTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECT
T ss_pred CEEEEEEeCCCCCeeecceeec-----------CC--CCCC--ccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECC
Confidence 9999999963222111111000 00 0000 112345688999999966 77777788999999998
Q ss_pred CCeee--Eeecc-CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCC--CCCccc--eEeec------CCeeEEEeCCCC
Q 010748 298 AGKCN--LTLEH-HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI--STHSGF--KWAVA------ADVESLAWDPHA 364 (502)
Q Consensus 298 ~~~~~--~~~~~-h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~--~~~~~~--~~~~~------~~v~~v~~~~~~ 364 (502)
+++.. ..+.. ....+..++|+|++..+++++..++.|.+|++.. +..... ..... ..+..++|+|++
T Consensus 172 ~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG 251 (347)
T 3hfq_A 172 AGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDG 251 (347)
T ss_dssp TSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTS
T ss_pred CCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCC
Confidence 55432 22222 2346788999999933555567789999999875 221111 11111 347889999998
Q ss_pred CCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeC-CCcEEEE--ECCCCCeeE
Q 010748 365 EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST-DKMVKLW--DLSNNQPSC 441 (502)
Q Consensus 365 ~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~-dg~i~vw--d~~~~~~~~ 441 (502)
..+++++..++.|.+|++..... ...+..+..+...+..++|+|++ ++|++++. ++.|.+| |..+++...
T Consensus 252 ~~l~v~~~~~~~v~v~~~~~~g~------~~~~~~~~~~~~~~~~~~~spdg-~~l~v~~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 252 HFLYVSNRGYNTLAVFAVTADGH------LTLIQQISTEGDFPRDFDLDPTE-AFVVVVNQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp CEEEEEEETTTEEEEEEECGGGC------EEEEEEEECSSSCCCEEEECTTS-SEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred CEEEEEeCCCCEEEEEEECCCCc------EEEeEEEecCCCCcCeEEECCCC-CEEEEEEcCCCcEEEEEEeCCCCeEEe
Confidence 75556777799999999873210 24455666667778999999998 76766665 5899999 555666433
No 155
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.81 E-value=8.7e-18 Score=164.21 Aligned_cols=282 Identities=11% Similarity=0.080 Sum_probs=173.5
Q ss_pred eEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccC--CCcceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCC-CC
Q 010748 153 VIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIP--AFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLD-VI 229 (502)
Q Consensus 153 ~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~-~~ 229 (502)
.|++|+.... ..+.+|.++...+ .+......... ..|..++| +|+|++|++++.+ .|.+|++. .+
T Consensus 4 ~~~vg~~~~~-~~i~~~~~d~~~g---~l~~~~~~~~~~~~~~~~~a~-------spdg~~l~~~~~~-~v~~~~~~~~g 71 (365)
T 1jof_A 4 HLMIGTWTPP-GAIFTVQFDDEKL---TCKLIKRTEIPQDEPISWMTF-------DHERKNIYGAAMK-KWSSFAVKSPT 71 (365)
T ss_dssp EEEEEESSSS-CEEEEEEEETTTT---EEEEEEEEECCTTCCCSEEEE-------CTTSSEEEEEEBT-EEEEEEEEETT
T ss_pred EEEEEEccCC-CcEEEEEEECCCC---CEEEeeEEccCCCCCCcEEEE-------CCCCCEEEEEccc-eEEEEEECCCC
Confidence 3555554321 2355556655444 33322222112 23455555 8999999998887 99999986 32
Q ss_pred CCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCc-EEEEEe-------------cCCcEEEEe
Q 010748 230 DEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRN-ILASAS-------------ADKQVKIWD 295 (502)
Q Consensus 230 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~-~l~sgs-------------~dg~v~vwd 295 (502)
..... .....+ +.+.+++|+|+++. ++++++ .+|++.+|+
T Consensus 72 ~~~~~-------------------------~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~ 125 (365)
T 1jof_A 72 EIVHE-------------------------ASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFS 125 (365)
T ss_dssp EEEEE-------------------------EEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEE
T ss_pred CEEEe-------------------------eEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEc
Confidence 21100 000011 23566899999543 355553 689999999
Q ss_pred CC-CCeeeEeec----cCCCCeEEEEEcCCCCcEEEEEe-CCCcEEEEecC-CCCCccc-eEe---ecCCeeEEEeCCCC
Q 010748 296 VA-AGKCNLTLE----HHTDKVQAVAWNHHSPQILLSGS-FDRSVVMKDAR-ISTHSGF-KWA---VAADVESLAWDPHA 364 (502)
Q Consensus 296 ~~-~~~~~~~~~----~h~~~v~~l~~~~~~~~~l~s~s-~dg~i~iwd~~-~~~~~~~-~~~---~~~~v~~v~~~~~~ 364 (502)
+. .++....+. .+...+.+++|+|++ ++|+++. .++.|.+|++. +++.... ... +...+..++|+|++
T Consensus 126 ~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG-~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg 204 (365)
T 1jof_A 126 VSETGKLEKNVQNYEYQENTGIHGMVFDPTE-TYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTG 204 (365)
T ss_dssp ECTTCCEEEEEEEEECCTTCCEEEEEECTTS-SEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTS
T ss_pred cCCCCcCcceEeeEEeCCCCcceEEEECCCC-CEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCC
Confidence 97 465544443 255789999999999 6666665 46899999998 5543221 112 24568999999998
Q ss_pred CCEEEEEeCCCcEEEEECCCCCCCCCCCCCccc---eEEe-------ccCC------CeeEEE-EcCCCCCEEEEEeC-C
Q 010748 365 EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSS---FTLH-------AHDK------AVCTIS-YNPLVPNLLATGST-D 426 (502)
Q Consensus 365 ~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~---~~~~-------~h~~------~v~~l~-~sp~~~~~l~t~s~-d 426 (502)
..+++++..++.|.+|++.... .... ..+. +|.. .+..++ |+|++ ++|+++.. .
T Consensus 205 ~~l~v~~~~~~~v~v~~~~~~~-------g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG-~~l~v~~~~~ 276 (365)
T 1jof_A 205 NYLYALMEAGNRICEYVIDPAT-------HMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSG-KYMFASSRAN 276 (365)
T ss_dssp SEEEEEETTTTEEEEEEECTTT-------CCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTS-SEEEEEEEES
T ss_pred CEEEEEECCCCeEEEEEEeCCC-------CcEEEccceEEcCCCCcCCcccccccccccccEEEECCCC-CEEEEECCCC
Confidence 7444444457899999875321 0111 1121 1222 478999 99998 66666553 2
Q ss_pred C-----cEEEEECC-CCCeeEEEE-ecCCCCcEEEEEEcC---CCCcEEEEEeC-CCcEEEEECCCC
Q 010748 427 K-----MVKLWDLS-NNQPSCIAS-RNPKAGAVFSVAFSE---DSPFVLAIGGS-KGKLEIWDTLSD 482 (502)
Q Consensus 427 g-----~i~vwd~~-~~~~~~~~~-~~~~~~~v~~~~~sp---d~~~ll~sg~~-dg~i~vwd~~~~ 482 (502)
+ .|.+|++. +++...+.. ...+...+..++|+| ++++ |++++. ++.|.||++...
T Consensus 277 ~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~-l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 277 KFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEW-MAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp STTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTE-EEEECSSSCEEEEEEEETT
T ss_pred CCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCE-EEEEEcCCCeEEEEEEchh
Confidence 3 89999996 555332222 323334456789999 8996 555655 589999999766
No 156
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.80 E-value=2.7e-18 Score=165.15 Aligned_cols=234 Identities=11% Similarity=0.050 Sum_probs=166.9
Q ss_pred CEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCccc-ceeeEEeccCCCcEEEEEecC
Q 010748 210 NFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTD-SVLGLAWNKEFRNILASASAD 288 (502)
Q Consensus 210 ~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~V~~l~~~~~~~~~l~sgs~d 288 (502)
++|++++.++.|++||+.++...... ..++.. .+.+++|+|+++.++++++.+
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~--------------------------~~~~~~~~~~~~~~s~dg~~l~v~~~~~ 55 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVI--------------------------TIADAGPTPMVPMVAPGGRIAYATVNKS 55 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEE--------------------------ECTTCTTCCCCEEECTTSSEEEEEETTT
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEE--------------------------EcCCCCCCccceEEcCCCCEEEEEeCCC
Confidence 57899999999999999764322111 012222 478899999966666777788
Q ss_pred CcEEEEeCCCCeeeEeecc-C----CCCeEEEEEcCCCCcEEEEEe------------CCCcEEEEecCCCCCccceEee
Q 010748 289 KQVKIWDVAAGKCNLTLEH-H----TDKVQAVAWNHHSPQILLSGS------------FDRSVVMKDARISTHSGFKWAV 351 (502)
Q Consensus 289 g~v~vwd~~~~~~~~~~~~-h----~~~v~~l~~~~~~~~~l~s~s------------~dg~i~iwd~~~~~~~~~~~~~ 351 (502)
+.|.+||+.+++.+..+.. + ...+.+++|+|++ ++|++++ .++.|.+||+.+.+... ....
T Consensus 56 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~-~~~~ 133 (337)
T 1pby_B 56 ESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDG-KTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRK-AFEA 133 (337)
T ss_dssp TEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEE-EEEC
T ss_pred CeEEEEECCCCCeEeeEEcCCcccccccccceEECCCC-CEEEEEecccccccccccccCceEEEEECCCCcEEE-EEeC
Confidence 9999999999988877653 2 2267789999999 6777775 57999999998765443 3344
Q ss_pred cCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCC----
Q 010748 352 AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK---- 427 (502)
Q Consensus 352 ~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg---- 427 (502)
...+.+++|+|++.. ++++ ++.|++||+.++ .....+..+.. ...+.|+|++..+++++..++
T Consensus 134 ~~~~~~~~~s~dg~~-l~~~--~~~i~~~d~~~~---------~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~ 200 (337)
T 1pby_B 134 PRQITMLAWARDGSK-LYGL--GRDLHVMDPEAG---------TLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMAT 200 (337)
T ss_dssp CSSCCCEEECTTSSC-EEEE--SSSEEEEETTTT---------EEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEE
T ss_pred CCCcceeEECCCCCE-EEEe--CCeEEEEECCCC---------cEeeeeecccc-CCCceeCCCccEEeeeccCCCceee
Confidence 567889999998874 5555 689999999876 44445543331 113378888743433333333
Q ss_pred -------------------cEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010748 428 -------------------MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 428 -------------------~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~ 488 (502)
.|.+||+.+++.. ......+...+.+++|+|++++ |+++ ++.|++||+.+++.+...
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~-l~~~--~~~v~~~d~~~~~~~~~~ 276 (337)
T 1pby_B 201 PFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTR-AFGA--YNVLESFDLEKNASIKRV 276 (337)
T ss_dssp EEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSE-EEEE--ESEEEEEETTTTEEEEEE
T ss_pred eeeccccccccccccccccceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCE-EEEe--CCeEEEEECCCCcCccee
Confidence 4689999998854 4455556677899999999996 5555 689999999988776543
No 157
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.80 E-value=7.2e-17 Score=157.28 Aligned_cols=287 Identities=8% Similarity=0.081 Sum_probs=173.5
Q ss_pred CccccccccccCCCceEEEEEecC-CcceeEEEEEecCCCCCCCeeeeeccc-cCCCcceeeeecCCCCCCCCCCEEEEe
Q 010748 138 DSEDLEDMTINPNDAVIVCARNED-DVSHLEVYILEESDGGDPNLYVHHHII-IPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~-~~~~l~v~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~la~g 215 (502)
+......++|+|++++|++++.++ ....+.+|.++...+ .+....... ....|..+++ ++++|+++
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g---~~~~~~~~~~~~~~p~~~~~---------dg~~l~~~ 115 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKG---TLHLLNTQKTMGADPCYLTT---------NGKNIVTA 115 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTT---EEEEEEEEECSSSCEEEEEE---------CSSEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCC---cEEEeeEeccCCCCcEEEEE---------CCCEEEEE
Confidence 345677899999999999888752 124678888886543 332222111 1223344332 67777766
Q ss_pred c-CCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEE
Q 010748 216 S-MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIW 294 (502)
Q Consensus 216 ~-~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vw 294 (502)
+ .++.|.+|++.....+......-. .. .........+...+.+++|+|++..+++++..++.|.+|
T Consensus 116 ~~~~~~v~~~~~~~~g~~~~~~~~~~----------~~---g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~ 182 (361)
T 3scy_A 116 NYSGGSITVFPIGQDGALLPASDVIE----------FK---GSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKF 182 (361)
T ss_dssp ETTTTEEEEEEBCTTSCBCSCSEEEE----------CC---CCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred ECCCCEEEEEEeCCCCcCcccceeEE----------cc---CCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEE
Confidence 5 578999999975433221110000 00 000000112344578899999965455666668999999
Q ss_pred eCCCCe-------e------eEeeccCCCCeEEEEEcCCCCcEEEEEe-CCCcEEEEecCCCCCccceE-----eecCCe
Q 010748 295 DVAAGK-------C------NLTLEHHTDKVQAVAWNHHSPQILLSGS-FDRSVVMKDARISTHSGFKW-----AVAADV 355 (502)
Q Consensus 295 d~~~~~-------~------~~~~~~h~~~v~~l~~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~-----~~~~~v 355 (502)
++.... . ......+...+.+++|+|++ +++++++ .++.|.+|++.++....... .....+
T Consensus 183 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~ 261 (361)
T 3scy_A 183 NINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDG-KFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGS 261 (361)
T ss_dssp EECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTS-SEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCE
T ss_pred EEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCC-CEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCc
Confidence 887543 1 11122345668899999999 6666655 68999999998654322111 112346
Q ss_pred eEEEeCCCCCCEEEEEeC-CCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEe-CCCcEEEEE
Q 010748 356 ESLAWDPHAEHSFVVSLE-DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS-TDKMVKLWD 433 (502)
Q Consensus 356 ~~v~~~~~~~~~~~~~~~-dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s-~dg~i~vwd 433 (502)
..++|+|++..++++... ++.|.+|++...... ...+..+.. ...+.+++|+|++ ++|++++ .++.|.+|.
T Consensus 262 ~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~-----~~~~~~~~~-g~~~~~~~~spdg-~~l~~~~~~~~~v~v~~ 334 (361)
T 3scy_A 262 GDIHLSPDGKYLYASNRLKADGVAIFKVDETNGT-----LTKVGYQLT-GIHPRNFIITPNG-KYLLVACRDTNVIQIFE 334 (361)
T ss_dssp EEEEECTTSSEEEEEECSSSCEEEEEEECTTTCC-----EEEEEEEEC-SSCCCEEEECTTS-CEEEEEETTTTEEEEEE
T ss_pred ccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCc-----EEEeeEecC-CCCCceEEECCCC-CEEEEEECCCCCEEEEE
Confidence 799999998744444444 589999999632100 123444444 5578899999998 6666666 678999965
Q ss_pred C--CCCCeeEEEEecCCCCcEEEEEEc
Q 010748 434 L--SNNQPSCIASRNPKAGAVFSVAFS 458 (502)
Q Consensus 434 ~--~~~~~~~~~~~~~~~~~v~~~~~s 458 (502)
+ .+++...+ ....+...+.|+.|.
T Consensus 335 ~d~~~g~~~~~-~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 335 RDQATGLLTDI-KKDIKVDKPVCLKFV 360 (361)
T ss_dssp ECTTTCCEEEC-SCCEECSSEEEEEEE
T ss_pred EECCCCcEeec-ceeeeCCCCeEEEEc
Confidence 4 45552211 112244568888885
No 158
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.80 E-value=6.5e-18 Score=166.24 Aligned_cols=287 Identities=10% Similarity=0.031 Sum_probs=178.2
Q ss_pred cccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCCcE
Q 010748 142 LEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAI 221 (502)
Q Consensus 142 v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~dg~I 221 (502)
+....|+|+|+.|+.++..+. ...||+++........+..++... .....| +|+|++|+.++.++.|
T Consensus 38 ~~~~~~SpDg~~l~~~~~~~g--~~~l~~~d~~~g~~~~lt~~~~~~----~~~~~~-------spdg~~l~~~~~~~~l 104 (388)
T 3pe7_A 38 FYQKCFTRDGSKLLFGGAFDG--PWNYYLLDLNTQVATQLTEGRGDN----TFGGFL-------SPDDDALFYVKDGRNL 104 (388)
T ss_dssp TTSCCBCTTSCEEEEEECTTS--SCEEEEEETTTCEEEECCCSSCBC----SSSCEE-------CTTSSEEEEEETTTEE
T ss_pred hcCccCCCCCCEEEEEEcCCC--CceEEEEeCCCCceEEeeeCCCCC----ccceEE-------cCCCCEEEEEeCCCeE
Confidence 344899999999999987332 447888886654111111111111 113344 8999999999999999
Q ss_pred EEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEE--eccCCCcEEEEE--------------
Q 010748 222 EIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA--WNKEFRNILASA-------------- 285 (502)
Q Consensus 222 ~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~--~~~~~~~~l~sg-------------- 285 (502)
++||+.++.... ....+...+.... ++|++. +++..
T Consensus 105 ~~~d~~~g~~~~---------------------------~~~~~~~~~~~~~~~~~~dg~-~l~~~~~~~~~~~~~~~~~ 156 (388)
T 3pe7_A 105 MRVDLATLEENV---------------------------VYQVPAEWVGYGTWVANSDCT-KLVGIEIRREDWVPLTDWK 156 (388)
T ss_dssp EEEETTTCCEEE---------------------------EEECCTTEEEEEEEEECTTSS-EEEEEEEEGGGCCCCCSHH
T ss_pred EEEECCCCccee---------------------------eeechhhcccccceeECCCCC-eeccccccCcccccccccc
Confidence 999998643211 1112333343333 478744 55532
Q ss_pred --------ecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcC-CCCcEEEEEeCC------CcEEEEecCCCCCccceEe
Q 010748 286 --------SADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNH-HSPQILLSGSFD------RSVVMKDARISTHSGFKWA 350 (502)
Q Consensus 286 --------s~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~-~~~~~l~s~s~d------g~i~iwd~~~~~~~~~~~~ 350 (502)
..+..|.+||+.+++... +..+...+..+.|+| ++ ..|+.++.. ..|.++|+...........
T Consensus 157 ~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~sp~dg-~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~ 234 (388)
T 3pe7_A 157 KFHEFYFTKPCCRLMRVDLKTGESTV-ILQENQWLGHPIYRPYDD-STVAFCHEGPHDLVDARMWLINEDGTNMRKVKTH 234 (388)
T ss_dssp HHHHHGGGCCCEEEEEEETTTCCEEE-EEEESSCEEEEEEETTEE-EEEEEEECSCTTTSSCSEEEEETTSCCCEESCCC
T ss_pred hhhhhhccCCcceEEEEECCCCceEE-eecCCccccccEECCCCC-CEEEEEEecCCCCCcceEEEEeCCCCceEEeeeC
Confidence 234679999999886544 444677899999999 88 666666553 3788888766544332222
Q ss_pred ec-CCeeEEEeCCCCCCEEEEEeCCC----cEEEEECCCCCCCCCCCCCccceEEeccCC---CeeEEEEcCCCCCEEEE
Q 010748 351 VA-ADVESLAWDPHAEHSFVVSLEDG----TIKGFDIRTAKSDPDSTSQQSSFTLHAHDK---AVCTISYNPLVPNLLAT 422 (502)
Q Consensus 351 ~~-~~v~~v~~~~~~~~~~~~~~~dg----~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~---~v~~l~~sp~~~~~l~t 422 (502)
.. ..+..++|+|++..+++++..++ .|++||+.++.. ..+..+..+.. ....+.|+|+|..++++
T Consensus 235 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-------~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~ 307 (388)
T 3pe7_A 235 AEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN-------RQLTSMPACSHLMSNYDGSLMVGDGSDAPVD 307 (388)
T ss_dssp CTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE-------EEEEEECCEEEEEECTTSSEEEEEECCC---
T ss_pred CCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce-------EEEEcCCCceeeeecCCCCeEccCCCcceeE
Confidence 21 24778899999886656655433 399999987621 22323322110 02224789998444433
Q ss_pred E--------eCCCcEEEEECCCCCeeEEEEecCCCC-----------cEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010748 423 G--------STDKMVKLWDLSNNQPSCIASRNPKAG-----------AVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 423 ~--------s~dg~i~vwd~~~~~~~~~~~~~~~~~-----------~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~ 481 (502)
. ..+..|++||+.+++...+.. +.. .+.+++|+|||++++.++..+|...||.+.-
T Consensus 308 ~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 308 VQDDSGYKIENDPFLYVFNMKNGTQHRVAR---HDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp ---------CCCCEEEEEETTTTEEEEEEE---CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred eeeccccccCCCCEEEEEeccCCceEEecc---ccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence 3 456789999999876433332 333 4778899999997666666778777776543
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.80 E-value=8.4e-19 Score=182.52 Aligned_cols=227 Identities=11% Similarity=0.090 Sum_probs=164.7
Q ss_pred CCCCCEEEEecC-CCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcc-cceeeEEeccCCCcEEE
Q 010748 206 REKGNFMAVGSM-EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHT-DSVLGLAWNKEFRNILA 283 (502)
Q Consensus 206 s~~~~~la~g~~-dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~V~~l~~~~~~~~~l~ 283 (502)
+|||++||+++. +|.++||+++.+.. ..+..|. ..|.+++|+|+ .+++
T Consensus 30 ~~DG~~la~~s~~~g~~~lw~~~~g~~----------------------------~~lt~~~~~~~~~~~~spd--~~l~ 79 (582)
T 3o4h_A 30 VVDGDKLLVVGFSEGSVNAYLYDGGET----------------------------VKLNREPINSVLDPHYGVG--RVIL 79 (582)
T ss_dssp EETTTEEEEEEEETTEEEEEEEETTEE----------------------------EECCSSCCSEECEECTTCS--EEEE
T ss_pred CCCCCeEEEEEccCCceeEEEEcCCCc----------------------------EeeecccccccccccCCCC--eEEE
Confidence 799999999887 99999999753211 1122344 68999999998 4777
Q ss_pred EEec---CCcEEEEeCCC---CeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeE
Q 010748 284 SASA---DKQVKIWDVAA---GKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVES 357 (502)
Q Consensus 284 sgs~---dg~v~vwd~~~---~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 357 (502)
+++. +....+|.+.. +... .+..+ ..+...+|+|++..++++++.++.+.+||+.++.... ...+.. .+
T Consensus 80 ~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~-l~~~~~--~~ 154 (582)
T 3o4h_A 80 VRDVSKGAEQHALFKVNTSRPGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRE-LARLPG--FG 154 (582)
T ss_dssp EEECSTTSCCEEEEEEETTSTTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEE-EEEESS--CE
T ss_pred EeccCCCCcceEEEEEeccCCCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEE-eecCCC--ce
Confidence 7765 45556655432 2222 34322 2345678888886666666666667799998876443 223333 88
Q ss_pred EEeCCCCCCEEEEEeCC----CcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCC--cEEE
Q 010748 358 LAWDPHAEHSFVVSLED----GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK--MVKL 431 (502)
Q Consensus 358 v~~~~~~~~~~~~~~~d----g~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg--~i~v 431 (502)
++|+|+|. .+++++.+ +.|++||+.++ . ...+..|...+..++|+|+| +.|+++..++ .|++
T Consensus 155 ~~~spDG~-~la~~~~~~~~~~~i~~~d~~~g---------~-~~~l~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~i~~ 222 (582)
T 3o4h_A 155 FVSDIRGD-LIAGLGFFGGGRVSLFTSNLSSG---------G-LRVFDSGEGSFSSASISPGM-KVTAGLETAREARLVT 222 (582)
T ss_dssp EEEEEETT-EEEEEEEEETTEEEEEEEETTTC---------C-CEEECCSSCEEEEEEECTTS-CEEEEEECSSCEEEEE
T ss_pred EEECCCCC-EEEEEEEcCCCCeEEEEEcCCCC---------C-ceEeecCCCccccceECCCC-CEEEEccCCCeeEEEE
Confidence 99999987 56655555 67999999875 2 34677888899999999998 8888888888 8999
Q ss_pred EECCCCCeeEEEEecCCCCcEEEEE--------EcCCCCcEEEEEeCCCcEEEEECCCCccc
Q 010748 432 WDLSNNQPSCIASRNPKAGAVFSVA--------FSEDSPFVLAIGGSKGKLEIWDTLSDAGI 485 (502)
Q Consensus 432 wd~~~~~~~~~~~~~~~~~~v~~~~--------~spd~~~ll~sg~~dg~i~vwd~~~~~~~ 485 (502)
||+.+++.. ....|...+..++ |+||| .++++++.+|.+++|++ ++.+
T Consensus 223 ~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~--g~~~ 278 (582)
T 3o4h_A 223 VDPRDGSVE---DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID--GERV 278 (582)
T ss_dssp ECTTTCCEE---ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET--TEEE
T ss_pred EcCCCCcEE---EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE--CCee
Confidence 999988743 5556666666666 99999 58999999999999999 5443
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.80 E-value=7.4e-18 Score=179.88 Aligned_cols=299 Identities=13% Similarity=0.102 Sum_probs=189.6
Q ss_pred cccccccCCCceEEEEEecCCc----ceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC
Q 010748 142 LEDMTINPNDAVIVCARNEDDV----SHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM 217 (502)
Q Consensus 142 v~~~~~~p~~~~l~~~~~~~~~----~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~ 217 (502)
+.++.|+|+|++|+.++..... ..-.||+++...+ .... ...+.....++.| ||+|++||.+.
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g---~~~~--~~~l~~~~~~~~~-------SPDG~~la~~~- 128 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNG---EFVR--GNELPRPIQYLCW-------SPVGSKLAYVY- 128 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT---EECC--SSCCCSSBCCEEE-------CSSTTCEEEEE-
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCC---cccc--ceecCcccccceE-------CCCCCEEEEEE-
Confidence 8899999999999998762100 0126777776554 2200 0111222344555 89999999986
Q ss_pred CCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccce---------eeEEeccCCCcEEEEEecC
Q 010748 218 EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSV---------LGLAWNKEFRNILASASAD 288 (502)
Q Consensus 218 dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V---------~~l~~~~~~~~~l~sgs~d 288 (502)
++.|++|++.++....- ... ......+.+|...| .+++|+|+| .+||+++.|
T Consensus 129 ~~~i~~~~~~~g~~~~l--~~~----------------~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG-~~la~~~~d 189 (719)
T 1z68_A 129 QNNIYLKQRPGDPPFQI--TFN----------------GRENKIFNGIPDWVYEEEMLATKYALWWSPNG-KFLAYAEFN 189 (719)
T ss_dssp TTEEEEESSTTSCCEEC--CCC----------------CBTTTEEESSCCHHHHHHTTCSSCCEEECTTS-SEEEEEEEE
T ss_pred CCeEEEEeCCCCCcEEE--ecC----------------CCcCCeEcccccceeeeecccCcccEEECCCC-CEEEEEEEC
Confidence 78999999986543210 000 00011122343333 589999995 578887765
Q ss_pred C----------------------------------cEEEEeCCCCeee--------EeeccCCCCeEEEEEcCCCCcEEE
Q 010748 289 K----------------------------------QVKIWDVAAGKCN--------LTLEHHTDKVQAVAWNHHSPQILL 326 (502)
Q Consensus 289 g----------------------------------~v~vwd~~~~~~~--------~~~~~h~~~v~~l~~~~~~~~~l~ 326 (502)
. .|++||+.+++.. ..+.+|...+.+++|+|++ ++++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~-~~~~ 268 (719)
T 1z68_A 190 DTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDE-RVCL 268 (719)
T ss_dssp CTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSS-EEEE
T ss_pred CCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCC-eEEE
Confidence 2 7889999988653 2234688889999999997 7777
Q ss_pred EEeCC----CcEEEEe----cCCCCCccce----EeecCCee-----EEEeCCCCCCEEEE-EeCCC--cEEEEECCCCC
Q 010748 327 SGSFD----RSVVMKD----ARISTHSGFK----WAVAADVE-----SLAWDPHAEHSFVV-SLEDG--TIKGFDIRTAK 386 (502)
Q Consensus 327 s~s~d----g~i~iwd----~~~~~~~~~~----~~~~~~v~-----~v~~~~~~~~~~~~-~~~dg--~v~i~d~~~~~ 386 (502)
+.... ..|.+|| +.+++..... ..+...+. .+.|+|++..+++. +..+| .|.+|++.+.
T Consensus 269 ~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~- 347 (719)
T 1z68_A 269 QWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVE- 347 (719)
T ss_dssp EEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCST-
T ss_pred EEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCC-
Confidence 65433 2488899 7766655444 34555566 78999998865553 44556 4666676553
Q ss_pred CCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeC----CCcEEEEECCC--CCeeEEEEec----CCCCcEEEEE
Q 010748 387 SDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST----DKMVKLWDLSN--NQPSCIASRN----PKAGAVFSVA 456 (502)
Q Consensus 387 ~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~----dg~i~vwd~~~--~~~~~~~~~~----~~~~~v~~~~ 456 (502)
. ...+..+...+..+.++ ++..+++++.. ++.+++|.+.. +... ...+. ++...+..+.
T Consensus 348 --------~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~ 416 (719)
T 1z68_A 348 --------N-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPS-KKCVTCHLRKERCQYYTAS 416 (719)
T ss_dssp --------T-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCC-EEESSTTTTTTTBCBEEEE
T ss_pred --------c-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCC-ceeccCccCCCCCceEEEE
Confidence 2 34555566667777777 66344444444 47888988754 3210 12222 2556788999
Q ss_pred EcCCCCcEEEEEeCC--CcEEEEECCCCccc
Q 010748 457 FSEDSPFVLAIGGSK--GKLEIWDTLSDAGI 485 (502)
Q Consensus 457 ~spd~~~ll~sg~~d--g~i~vwd~~~~~~~ 485 (502)
|+|++++++++++.. ..+.+||+.+++++
T Consensus 417 ~s~dg~~l~~~~s~~~~p~~~l~d~~~g~~~ 447 (719)
T 1z68_A 417 FSDYAKYYALVCYGPGIPISTLHDGRTDQEI 447 (719)
T ss_dssp ECGGGSSEEEEECCBSSCEEEEECSSSCCEE
T ss_pred ECCCCCEEEEEcCCCCCCeEEEEECCCCCEE
Confidence 999999766665544 46889999887754
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.79 E-value=1.7e-18 Score=184.78 Aligned_cols=282 Identities=9% Similarity=0.058 Sum_probs=179.5
Q ss_pred ccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC-----
Q 010748 143 EDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM----- 217 (502)
Q Consensus 143 ~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~----- 217 (502)
.++.|+|++++++++ .++ .||+|+...+....+..++... .....+++| ||+|++||+++.
T Consensus 19 ~~~~~s~dg~~~~~~-~d~-----~i~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~-------SpDg~~la~~~~~~~~~ 84 (719)
T 1z68_A 19 FFPNWISGQEYLHQS-ADN-----NIVLYNIETGQSYTILSNRTMK-SVNASNYGL-------SPDRQFVYLESDYSKLW 84 (719)
T ss_dssp CCCEESSSSEEEEEC-TTS-----CEEEEESSSCCEEEEECHHHHH-TTTCSEEEE-------CTTSSEEEEEEEEEECS
T ss_pred CccEECCCCeEEEEc-CCC-----CEEEEEcCCCcEEEEEcccccc-ccceeeEEE-------CCCCCeEEEEecCceeE
Confidence 368999999766654 344 5566665544222333333221 001245555 899999999876
Q ss_pred ----CCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEE
Q 010748 218 ----EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKI 293 (502)
Q Consensus 218 ----dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~v 293 (502)
++.|++||+.++..+.+ . . ....+.+++|+|+| ..||+++ ++.|++
T Consensus 85 ~~s~~~~i~~~d~~~g~~~~~---------------------~----~---l~~~~~~~~~SPDG-~~la~~~-~~~i~~ 134 (719)
T 1z68_A 85 RYSYTATYYIYDLSNGEFVRG---------------------N----E---LPRPIQYLCWSPVG-SKLAYVY-QNNIYL 134 (719)
T ss_dssp SSCEEEEEEEEETTTTEECCS---------------------S----C---CCSSBCCEEECSST-TCEEEEE-TTEEEE
T ss_pred EeecceEEEEEECCCCccccc---------------------e----e---cCcccccceECCCC-CEEEEEE-CCeEEE
Confidence 68999999986432110 0 0 12458899999995 4777765 789999
Q ss_pred EeCCCCeeeEee-ccCCCCe-----------------EEEEEcCCCCcEEEEEeCCC-----------------------
Q 010748 294 WDVAAGKCNLTL-EHHTDKV-----------------QAVAWNHHSPQILLSGSFDR----------------------- 332 (502)
Q Consensus 294 wd~~~~~~~~~~-~~h~~~v-----------------~~l~~~~~~~~~l~s~s~dg----------------------- 332 (502)
|++.++++.... .++...| .+++|+|+| +.|++++.|.
T Consensus 135 ~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG-~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 213 (719)
T 1z68_A 135 KQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNG-KFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIP 213 (719)
T ss_dssp ESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTS-SEEEEEEEECTTSCEEEEEECCSSSSCEEEEEE
T ss_pred EeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCC-CEEEEEEECCCCCceEEeeccCCCCCccceeec
Confidence 999988765433 2333322 489999999 7888877552
Q ss_pred -----------cEEEEecCCCCCc---cc-----eEeecCCeeEEEeCCCCCCEEEEEeCC----CcEEEEE----CCCC
Q 010748 333 -----------SVVMKDARISTHS---GF-----KWAVAADVESLAWDPHAEHSFVVSLED----GTIKGFD----IRTA 385 (502)
Q Consensus 333 -----------~i~iwd~~~~~~~---~~-----~~~~~~~v~~v~~~~~~~~~~~~~~~d----g~v~i~d----~~~~ 385 (502)
.|++||+.++... .. ...+...+.+++|+|++ .++++.... ..|.+|| +.++
T Consensus 214 yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~-~~~~~~~~~~~~~~~l~~~d~~~~~~~g 292 (719)
T 1z68_A 214 YPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDE-RVCLQWLKRVQNVSVLSICDFREDWQTW 292 (719)
T ss_dssp CCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSS-EEEEEEEESSTTEEEEEEEEECSSSSSE
T ss_pred CCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCC-eEEEEEeccccCeEEEEEEcccCCCCCC
Confidence 7889999876532 10 11245568999999985 455554322 2488899 6655
Q ss_pred CCCCCCCCCccceE--EeccCCCee-----EEEEcCCCCCEEE-EEeCCC--cEEEEECCCCCeeEEEEecCCCCcEEEE
Q 010748 386 KSDPDSTSQQSSFT--LHAHDKAVC-----TISYNPLVPNLLA-TGSTDK--MVKLWDLSNNQPSCIASRNPKAGAVFSV 455 (502)
Q Consensus 386 ~~~~~~~~~~~~~~--~~~h~~~v~-----~l~~sp~~~~~l~-t~s~dg--~i~vwd~~~~~~~~~~~~~~~~~~v~~~ 455 (502)
.. ..+.. ...|...+. .+.|+|++..+++ ++..+| .|.+|++.+++. ..+..+...+..+
T Consensus 293 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~---~~lt~~~~~v~~~ 362 (719)
T 1z68_A 293 DC-------PKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENA---IQITSGKWEAINI 362 (719)
T ss_dssp EC-------CGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTC---EECSCSSSCEEEE
T ss_pred ce-------EEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCce---EecccCceEEEEE
Confidence 21 11111 135667676 8899999854444 344555 477778777652 3344455668887
Q ss_pred EEcCCCCcEEEEEeC----CCcEEEEECCC
Q 010748 456 AFSEDSPFVLAIGGS----KGKLEIWDTLS 481 (502)
Q Consensus 456 ~~spd~~~ll~sg~~----dg~i~vwd~~~ 481 (502)
.++ ++..+++++.. .+.+++|.+..
T Consensus 363 ~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 363 FRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp EEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred EEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 777 88766666554 47889998754
No 162
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.76 E-value=1.9e-16 Score=153.02 Aligned_cols=238 Identities=9% Similarity=0.082 Sum_probs=157.1
Q ss_pred cccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCC--CcceeeeecCCCCCCCCCCEEE-EecCCCc
Q 010748 144 DMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPA--FPLCMAWLDCPLKDREKGNFMA-VGSMEPA 220 (502)
Q Consensus 144 ~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~s~~~~~la-~g~~dg~ 220 (502)
.++++++++++++++.++ .|++|+.... .+.. ....+. .|..++| +|+|++++ ++..++.
T Consensus 4 g~~~~~~~~~~v~~~~~~-----~v~~~d~~~~---~~~~--~~~~~~~~~~~~~~~-------s~dg~~~~v~~~~~~~ 66 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPN-----NLHVVDVASD---TVYK--SCVMPDKFGPGTAMM-------APDNRTAYVLNNHYGD 66 (349)
T ss_dssp CCCCCTTCEEEEEEETTT-----EEEEEETTTT---EEEE--EEECSSCCSSCEEEE-------CTTSSEEEEEETTTTE
T ss_pred cccccCCCEEEEEeCCCC-----eEEEEECCCC---cEEE--EEecCCCCCCceeEE-------CCCCCEEEEEeCCCCc
Confidence 467889999999998776 7777776554 2221 112222 3556665 78998654 5567899
Q ss_pred EEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecC------------
Q 010748 221 IEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD------------ 288 (502)
Q Consensus 221 I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~d------------ 288 (502)
|.+||+.++........ + .....+...+.+++|+|++ .+|++++.+
T Consensus 67 i~~~d~~t~~~~~~~~~-~--------------------~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~ 124 (349)
T 1jmx_B 67 IYGIDLDTCKNTFHANL-S--------------------SVPGEVGRSMYSFAISPDG-KEVYATVNPTQRLNDHYVVKP 124 (349)
T ss_dssp EEEEETTTTEEEEEEES-C--------------------CSTTEEEECSSCEEECTTS-SEEEEEEEEEEECSSCEEECC
T ss_pred EEEEeCCCCcEEEEEEc-c--------------------cccccccccccceEECCCC-CEEEEEcccccccccccccCC
Confidence 99999976432211100 0 0000013458899999995 477777755
Q ss_pred CcEEEEeCCCCee---eEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEe---------------
Q 010748 289 KQVKIWDVAAGKC---NLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA--------------- 350 (502)
Q Consensus 289 g~v~vwd~~~~~~---~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~--------------- 350 (502)
+.|.+||+.+++. +..+. +...+.+++|+|++ + +++++ +.|.+||+.+.+.......
T Consensus 125 ~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg-~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (349)
T 1jmx_B 125 PRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDG-S-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLY 199 (349)
T ss_dssp CEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTS-C-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCC
T ss_pred CeEEEEECCCccccceeeecc-CCCcccceeECCCC-c-EEEcc--CcEEEEeCCCCceeccccccccCCccccCcccee
Confidence 8999999988543 33444 34468899999999 5 45543 4499999887653221100
Q ss_pred -----------------------------------------------------ecCCeeEEEeCC-CCCCEEEEEeCCCc
Q 010748 351 -----------------------------------------------------VAADVESLAWDP-HAEHSFVVSLEDGT 376 (502)
Q Consensus 351 -----------------------------------------------------~~~~v~~v~~~~-~~~~~~~~~~~dg~ 376 (502)
....+..++|+| ++. +++++ ++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~-~l~~~--~~~ 276 (349)
T 1jmx_B 200 FWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPN-QIYGV--LNR 276 (349)
T ss_dssp CCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTT-EEEEE--ESE
T ss_pred eecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCC-EEEEE--cCe
Confidence 011345677889 776 56666 889
Q ss_pred EEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCe
Q 010748 377 IKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 439 (502)
Q Consensus 377 v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~ 439 (502)
|.+||+.+. +.+..+.. ...+.+++|+|++ .+|++++.++.|++||+.+++.
T Consensus 277 v~~~d~~~~---------~~~~~~~~-~~~~~~~~~s~dg-~~l~~~~~~~~v~v~d~~~~~~ 328 (349)
T 1jmx_B 277 LAKYDLKQR---------KLIKAANL-DHTYYCVAFDKKG-DKLYLGGTFNDLAVFNPDTLEK 328 (349)
T ss_dssp EEEEETTTT---------EEEEEEEC-SSCCCEEEECSSS-SCEEEESBSSEEEEEETTTTEE
T ss_pred EEEEECccC---------eEEEEEcC-CCCccceEECCCC-CEEEEecCCCeEEEEeccccce
Confidence 999999876 44444443 3457899999998 6666678889999999998874
No 163
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.75 E-value=1.2e-16 Score=157.45 Aligned_cols=300 Identities=11% Similarity=0.015 Sum_probs=173.9
Q ss_pred cccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCC
Q 010748 140 EDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEP 219 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~dg 219 (502)
..+.+++|+|+|+.|+.+...+. ...||+++........+..++. ....+..| +|+|++|+.++.++
T Consensus 36 ~~~~~~~~SpdG~~l~~~~~~~g--~~~l~~~d~~~~~~~~l~~~~~----~~~~~~~~-------spdg~~l~~~~~~~ 102 (396)
T 3c5m_A 36 NYFYQKCFTQDGKKLLFAGDFDG--NRNYYLLNLETQQAVQLTEGKG----DNTFGGFI-------STDERAFFYVKNEL 102 (396)
T ss_dssp CCTTSCCBCTTSCEEEEEECTTS--SCEEEEEETTTTEEEECCCSSC----BCTTTCEE-------CTTSSEEEEEETTT
T ss_pred eeeecCcCCCCCCEEEEEEecCC--CceEEEEECCCCcEEEeecCCC----CccccceE-------CCCCCEEEEEEcCC
Confidence 34788999999999988876532 2367888765541111111110 01112334 89999999999999
Q ss_pred cEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcc----cceeeEEeccCCCcEEEEE-----ecCCc
Q 010748 220 AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHT----DSVLGLAWNKEFRNILASA-----SADKQ 290 (502)
Q Consensus 220 ~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~----~~V~~l~~~~~~~~~l~sg-----s~dg~ 290 (502)
.|++|++.++..... ..... . .. . ......+.... .....+.|+|++. .++.+ ..+..
T Consensus 103 ~l~~~d~~~~~~~~~-~~~~~--~-------~~-~-~g~~l~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~~~~~~~~ 169 (396)
T 3c5m_A 103 NLMKVDLETLEEQVI-YTVDE--E-------WK-G-YGTWVANSDCTKLVGIEILKRDWQPLTS-WEKFAEFYHTNPTCR 169 (396)
T ss_dssp EEEEEETTTCCEEEE-EECCT--T-------EE-E-EEEEEECTTSSEEEEEEEEGGGCCCCCS-HHHHHHHHHTCCCEE
T ss_pred cEEEEECCCCCcEEE-Eeccc--c-------cC-C-CCCEEEeccCCccccccccccccCCCCc-ceeeeeeccCCCcce
Confidence 999999976532111 00000 0 00 0 00000000000 0001146778754 44433 45678
Q ss_pred EEEEeCCCCeeeEeeccCCCCeEEEEEcC-CCCcEEEEEeCC------CcEEEEecCCCCCccceEee-cCCeeEEEeCC
Q 010748 291 VKIWDVAAGKCNLTLEHHTDKVQAVAWNH-HSPQILLSGSFD------RSVVMKDARISTHSGFKWAV-AADVESLAWDP 362 (502)
Q Consensus 291 v~vwd~~~~~~~~~~~~h~~~v~~l~~~~-~~~~~l~s~s~d------g~i~iwd~~~~~~~~~~~~~-~~~v~~v~~~~ 362 (502)
|.+||+.+++..... .+...+..+.|+| ++ ..|+.++.+ ..|.+|++............ ...+..++|+|
T Consensus 170 l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg-~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~sp 247 (396)
T 3c5m_A 170 LIKVDIETGELEVIH-QDTAWLGHPIYRPFDD-STVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIP 247 (396)
T ss_dssp EEEEETTTCCEEEEE-EESSCEEEEEEETTEE-EEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECT
T ss_pred EEEEECCCCcEEeec-cCCcccccceECCCCC-CEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECC
Confidence 999999988765544 4677899999999 66 555555443 36888888765433222211 22477889999
Q ss_pred CCCCEEEEEeCC----CcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcC-CCCCEEEEEe-------------
Q 010748 363 HAEHSFVVSLED----GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNP-LVPNLLATGS------------- 424 (502)
Q Consensus 363 ~~~~~~~~~~~d----g~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp-~~~~~l~t~s------------- 424 (502)
++..+++++..+ +.|++||+.++ .. ..+..... .. +.|+| ++ .++++++
T Consensus 248 dg~~l~~~~~~~~~~~~~l~~~d~~~g---------~~-~~l~~~~~-~~-~~~s~~dg-~~l~~~~~~~p~~~~~~~~~ 314 (396)
T 3c5m_A 248 DGSAMAYVSYFKGQTDRVIYKANPETL---------EN-EEVMVMPP-CS-HLMSNFDG-SLMVGDGCDAPVDVADADSY 314 (396)
T ss_dssp TSSCEEEEEEETTTCCEEEEEECTTTC---------CE-EEEEECCS-EE-EEEECSSS-SEEEEEECCC----------
T ss_pred CCCEEEEEecCCCCccceEEEEECCCC---------Ce-EEeeeCCC-CC-CCccCCCC-ceEEEecCCcceeecccccc
Confidence 987655554432 34999999875 21 11221122 33 88999 88 6777654
Q ss_pred ---CCCcEEEEECCCCCeeEEEEecCCC--------CcEEEEEEcCCCCcEEEEEeCCCcEEEEECC
Q 010748 425 ---TDKMVKLWDLSNNQPSCIASRNPKA--------GAVFSVAFSEDSPFVLAIGGSKGKLEIWDTL 480 (502)
Q Consensus 425 ---~dg~i~vwd~~~~~~~~~~~~~~~~--------~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~ 480 (502)
.++.|++||+.+++...+....... ..+..++|+|++.++++++..++...||.+.
T Consensus 315 ~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 315 NIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred ccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 3467999999887643333222100 0255678999999755555556665666543
No 164
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.73 E-value=1.1e-15 Score=150.15 Aligned_cols=242 Identities=10% Similarity=0.018 Sum_probs=160.6
Q ss_pred CCCCCCCCEEEEecC-CCc--EEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCC
Q 010748 203 LKDREKGNFMAVGSM-EPA--IEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFR 279 (502)
Q Consensus 203 ~~~s~~~~~la~g~~-dg~--I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~ 279 (502)
++|+|+|++||.++. +|. |.+||+.++... ....+|...+..++|+|+ +
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~---------------------------~lt~~~~~~~~~~~~spd-g 92 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVAT---------------------------QLTEGRGDNTFGGFLSPD-D 92 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEE---------------------------ECCCSSCBCSSSCEECTT-S
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceE---------------------------EeeeCCCCCccceEEcCC-C
Confidence 456999999999887 664 777787653221 122345556667889999 4
Q ss_pred cEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEE--cCCCCcEEEEE----------------------eCCCcEE
Q 010748 280 NILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAW--NHHSPQILLSG----------------------SFDRSVV 335 (502)
Q Consensus 280 ~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~--~~~~~~~l~s~----------------------s~dg~i~ 335 (502)
..|+.++.++.|++||+.+++....+..+...+....| +|++ .+++.. ..+..|.
T Consensus 93 ~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (388)
T 3pe7_A 93 DALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDC-TKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLM 171 (388)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTS-SEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCC-CeeccccccCcccccccccchhhhhhccCCcceEE
Confidence 58888888899999999999877766666665654444 7888 666532 2447899
Q ss_pred EEecCCCCCccceEeecCCeeEEEeCC-CCCCEEEEEeC-----CCcEEEEECCCCCCCCCCCCCccceEEeccC--CCe
Q 010748 336 MKDARISTHSGFKWAVAADVESLAWDP-HAEHSFVVSLE-----DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHD--KAV 407 (502)
Q Consensus 336 iwd~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~~~~~~-----dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~--~~v 407 (502)
+||+.++.... .......+..++|+| ++..++++... ...|.++|+... ....+..+. ..+
T Consensus 172 ~~d~~~g~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~----------~~~~l~~~~~~~~~ 240 (388)
T 3pe7_A 172 RVDLKTGESTV-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGT----------NMRKVKTHAEGESC 240 (388)
T ss_dssp EEETTTCCEEE-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSC----------CCEESCCCCTTEEE
T ss_pred EEECCCCceEE-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCC----------ceEEeeeCCCCccc
Confidence 99998876433 445667789999999 87644344432 337888887653 233343344 357
Q ss_pred eEEEEcCCCCCEEEEEeCCC----cEEEEECCCCCeeEEEEecCCCCcE---EEEEEcCCCCcEEEEE--------eCCC
Q 010748 408 CTISYNPLVPNLLATGSTDK----MVKLWDLSNNQPSCIASRNPKAGAV---FSVAFSEDSPFVLAIG--------GSKG 472 (502)
Q Consensus 408 ~~l~~sp~~~~~l~t~s~dg----~i~vwd~~~~~~~~~~~~~~~~~~v---~~~~~spd~~~ll~sg--------~~dg 472 (502)
..++|+|+|..+++++..++ .|++||+.+++...+.....+.... ..+.|+|+|++++++. ..+.
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 320 (388)
T 3pe7_A 241 THEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDP 320 (388)
T ss_dssp EEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCC
T ss_pred ccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCC
Confidence 78999999844444443322 3999999998865555554311100 1136999999755433 4566
Q ss_pred cEEEEECCCCcc
Q 010748 473 KLEIWDTLSDAG 484 (502)
Q Consensus 473 ~i~vwd~~~~~~ 484 (502)
.|++||+.+++.
T Consensus 321 ~i~~~d~~~~~~ 332 (388)
T 3pe7_A 321 FLYVFNMKNGTQ 332 (388)
T ss_dssp EEEEEETTTTEE
T ss_pred EEEEEeccCCce
Confidence 899999988664
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.73 E-value=6.4e-15 Score=138.47 Aligned_cols=237 Identities=14% Similarity=0.148 Sum_probs=164.8
Q ss_pred CCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEec-cCCCcEEEE
Q 010748 206 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWN-KEFRNILAS 284 (502)
Q Consensus 206 s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~-~~~~~~l~s 284 (502)
+++++++++.+.++.|.+|+... ..... +.. .....+|...+.++++. ++ +.++++
T Consensus 38 ~~~g~l~v~~~~~~~i~~~d~~g-~~~~~---~~~------------------~~~~~~~~~~p~~i~~~~~~-g~l~v~ 94 (286)
T 1q7f_A 38 NAQNDIIVADTNNHRIQIFDKEG-RFKFQ---FGE------------------CGKRDSQLLYPNRVAVVRNS-GDIIVT 94 (286)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTS-CEEEE---ECC------------------BSSSTTCBSSEEEEEEETTT-TEEEEE
T ss_pred CCCCCEEEEECCCCEEEEECCCC-cEEEE---ecc------------------cCCCcccccCceEEEEEcCC-CeEEEE
Confidence 68899888888899999999762 21111 000 00012455678999995 55 556665
Q ss_pred Eec-CCcEEEEeCCCCeeeEeec-cCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEe---ecCCeeEEE
Q 010748 285 ASA-DKQVKIWDVAAGKCNLTLE-HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA---VAADVESLA 359 (502)
Q Consensus 285 gs~-dg~v~vwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~---~~~~v~~v~ 359 (502)
... ++.|.+|+ .+++.+..+. .+...+.++++.+++ +++++...++.|.+|+.... ... ... ....+..++
T Consensus 95 ~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~g~-~~~-~~~~~~~~~~p~~i~ 170 (286)
T 1q7f_A 95 ERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKG-RIIVVECKVMRVIIFDQNGN-VLH-KFGCSKHLEFPNGVV 170 (286)
T ss_dssp ECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTS-CEEEEETTTTEEEEECTTSC-EEE-EEECTTTCSSEEEEE
T ss_pred cCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCC-CEEEEECCCCEEEEEcCCCC-EEE-EeCCCCccCCcEEEE
Confidence 543 78999999 6677777664 344678999999998 78888778899999996532 221 222 224588999
Q ss_pred eCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEecc--CCCeeEEEEcCCCCCEEEEEeCCC-cEEEEECCC
Q 010748 360 WDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH--DKAVCTISYNPLVPNLLATGSTDK-MVKLWDLSN 436 (502)
Q Consensus 360 ~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h--~~~v~~l~~sp~~~~~l~t~s~dg-~i~vwd~~~ 436 (502)
+++++. ++++...++.|++|+... ..+..+..+ ...+.++++++++ +++++...++ .|++|+..
T Consensus 171 ~~~~g~-l~v~~~~~~~i~~~~~~g----------~~~~~~~~~g~~~~p~~i~~d~~G-~l~v~~~~~~~~i~~~~~~- 237 (286)
T 1q7f_A 171 VNDKQE-IFISDNRAHCVKVFNYEG----------QYLRQIGGEGITNYPIGVGINSNG-EILIADNHNNFNLTIFTQD- 237 (286)
T ss_dssp ECSSSE-EEEEEGGGTEEEEEETTC----------CEEEEESCTTTSCSEEEEEECTTC-CEEEEECSSSCEEEEECTT-
T ss_pred ECCCCC-EEEEECCCCEEEEEcCCC----------CEEEEEccCCccCCCcEEEECCCC-CEEEEeCCCCEEEEEECCC-
Confidence 999765 666667789999999753 334444333 3578999999988 8888887776 99999965
Q ss_pred CCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcc
Q 010748 437 NQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 484 (502)
Q Consensus 437 ~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~ 484 (502)
++.............+.+++++|++. ++++ +.+++|++|++.....
T Consensus 238 g~~~~~~~~~~~~~~~~~i~~~~~g~-l~vs-~~~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 238 GQLISALESKVKHAQCFDVALMDDGS-VVLA-SKDYRLYIYRYVQLAP 283 (286)
T ss_dssp SCEEEEEEESSCCSCEEEEEEETTTE-EEEE-ETTTEEEEEECSCCCC
T ss_pred CCEEEEEcccCCCCcceeEEECCCCc-EEEE-CCCCeEEEEEcccccc
Confidence 44322233333334588999999997 5666 5789999999866443
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.72 E-value=5.5e-15 Score=144.25 Aligned_cols=249 Identities=9% Similarity=0.037 Sum_probs=156.8
Q ss_pred cccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCE--EEEec-
Q 010748 140 EDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNF--MAVGS- 216 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~--la~g~- 216 (502)
..+..++|+|++++|++++.+ .+.+|..+. .+ .+...........|.++. ++|+|++ ++++.
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~----~v~~~~~~~-~g---~~~~~~~~~~~g~~~~~~-------~spdg~~l~~~~~~~ 104 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK----KWSSFAVKS-PT---EIVHEASHPIGGHPRAND-------ADTNTRAIFLLAAKQ 104 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT----EEEEEEEEE-TT---EEEEEEEEECCSSGGGGC-------TTSCCEEEEEEECSS
T ss_pred CCCcEEEECCCCCEEEEEccc----eEEEEEECC-CC---CEEEeeEeecCCCCccEE-------ECCCCCEEEEEEecC
Confidence 357789999999999887754 567776652 22 221111111112244443 4899994 55653
Q ss_pred ------------CCCcEEEeeCCC-CCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEE
Q 010748 217 ------------MEPAIEIWDLDV-IDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILA 283 (502)
Q Consensus 217 ------------~dg~I~iwdl~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~ 283 (502)
.+|.+.+|+++. +....... .....+...+.+++|+|+++ +|+
T Consensus 105 ~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~-----------------------~~~~~~~~~~~~~~~spdG~-~l~ 160 (365)
T 1jof_A 105 PPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQ-----------------------NYEYQENTGIHGMVFDPTET-YLY 160 (365)
T ss_dssp TTCCEEEEEESSSCCEEEEEEECTTCCEEEEEE-----------------------EEECCTTCCEEEEEECTTSS-EEE
T ss_pred CcceeccceeecCCceEEEEccCCCCcCcceEe-----------------------eEEeCCCCcceEEEECCCCC-EEE
Confidence 689999999963 21111000 00012456789999999955 566
Q ss_pred EEe-cCCcEEEEeCC-CCeee--Eeec--cCCCCeEEEEEcCCCCcEEEEEe-CCCcEEEEecCC--CCCcc---ceEee
Q 010748 284 SAS-ADKQVKIWDVA-AGKCN--LTLE--HHTDKVQAVAWNHHSPQILLSGS-FDRSVVMKDARI--STHSG---FKWAV 351 (502)
Q Consensus 284 sgs-~dg~v~vwd~~-~~~~~--~~~~--~h~~~v~~l~~~~~~~~~l~s~s-~dg~i~iwd~~~--~~~~~---~~~~~ 351 (502)
++. .++.|++|++. +++.. ..+. .|...+..++|+|++ ++|++++ .++.|.+|++.. ++... .....
T Consensus 161 ~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg-~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~ 239 (365)
T 1jof_A 161 SADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTG-NYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLI 239 (365)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTS-SEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESS
T ss_pred EEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCC-CEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcC
Confidence 554 46899999998 67643 3333 245679999999999 6676666 478999998753 33211 01111
Q ss_pred -------cC------CeeEEE-eCCCCCCEEEEEeC-CC-----cEEEEECCCCCCCCCCCCCccce---EEeccCCCee
Q 010748 352 -------AA------DVESLA-WDPHAEHSFVVSLE-DG-----TIKGFDIRTAKSDPDSTSQQSSF---TLHAHDKAVC 408 (502)
Q Consensus 352 -------~~------~v~~v~-~~~~~~~~~~~~~~-dg-----~v~i~d~~~~~~~~~~~~~~~~~---~~~~h~~~v~ 408 (502)
.. .+..++ |+|++. +++++.. .+ .|.+|++... ..... ....+...+.
T Consensus 240 ~~~~~g~~~~~~~~~~~~~i~~~spdG~-~l~v~~~~~~~~~~~~i~v~~~~~~--------g~~~~~~~~~~~~~~~~~ 310 (365)
T 1jof_A 240 PPGIPDRDPETGKGLYRADVCALTFSGK-YMFASSRANKFELQGYIAGFKLRDC--------GSIEKQLFLSPTPTSGGH 310 (365)
T ss_dssp CTTCCCBCTTTSSBSEEEEEEEECTTSS-EEEEEEEESSTTSCCEEEEEEECTT--------SCEEEEEEEEECSSCCTT
T ss_pred CCCcCCcccccccccccccEEEECCCCC-EEEEECCCCCCCCCCeEEEEEECCC--------CCEEEeeeeeecCCCCcc
Confidence 11 478899 999987 4555443 33 8999999632 12221 2334555678
Q ss_pred EEEEcC---CCCCEEEEEeC-CCcEEEEECCCCC
Q 010748 409 TISYNP---LVPNLLATGST-DKMVKLWDLSNNQ 438 (502)
Q Consensus 409 ~l~~sp---~~~~~l~t~s~-dg~i~vwd~~~~~ 438 (502)
.++|+| ++ ++|++++. ++.|++|++....
T Consensus 311 ~~a~sp~~~dg-~~l~v~~~~~~~v~v~~~~~~~ 343 (365)
T 1jof_A 311 SNAVSPCPWSD-EWMAITDDQEGWLEIYRWKDEF 343 (365)
T ss_dssp CCCEEECTTCT-TEEEEECSSSCEEEEEEEETTE
T ss_pred cceecCCCcCC-CEEEEEEcCCCeEEEEEEchhh
Confidence 899999 67 78888776 4899999987653
No 167
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.72 E-value=2.8e-15 Score=144.11 Aligned_cols=202 Identities=19% Similarity=0.126 Sum_probs=147.8
Q ss_pred CcccceeeEEeccCCCcEEEEEecCCcEEEEeCCCCe-eeEee---------ccCCCCeEEEEEcC-CCCcEEEEEe-CC
Q 010748 264 SHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK-CNLTL---------EHHTDKVQAVAWNH-HSPQILLSGS-FD 331 (502)
Q Consensus 264 ~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~-~~~~~---------~~h~~~v~~l~~~~-~~~~~l~s~s-~d 331 (502)
++-.....|+++|++ +++++.+.++.|++|+..... .+..+ ..+-.....|+++| ++ .++++.+ .+
T Consensus 88 ~~~~~p~gia~d~~g-~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g-~lyv~d~~~~ 165 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDG-NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTG-AVFVSDGYCN 165 (329)
T ss_dssp TTCSSEEEEEECTTS-CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTC-CEEEEECSSC
T ss_pred CccCCceEEEECCCC-CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCC-eEEEEeCCCC
Confidence 344578899999994 588888889999999976442 45555 23445789999999 55 7888876 69
Q ss_pred CcEEEEecCCCCCccceEee----------cCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEE-
Q 010748 332 RSVVMKDARISTHSGFKWAV----------AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL- 400 (502)
Q Consensus 332 g~i~iwd~~~~~~~~~~~~~----------~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~- 400 (502)
+.|++|+.. +......... -..+..++++|++..++++...++.|++|+..++ ..+..+
T Consensus 166 ~~I~~~~~~-g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G---------~~~~~~~ 235 (329)
T 3fvz_A 166 SRIVQFSPS-GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTK---------EFVREIK 235 (329)
T ss_dssp CEEEEECTT-SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTC---------CEEEEEC
T ss_pred CeEEEEcCC-CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCC---------cEEEEEe
Confidence 999999943 3332211111 1237899999985667788888999999999865 445555
Q ss_pred -eccCCCeeEEEEcCCCCCEEEEEe-------CCCcEEEEECCCCCeeEEEEe---cCCCCcEEEEEEcCCCCcEEEEEe
Q 010748 401 -HAHDKAVCTISYNPLVPNLLATGS-------TDKMVKLWDLSNNQPSCIASR---NPKAGAVFSVAFSEDSPFVLAIGG 469 (502)
Q Consensus 401 -~~h~~~v~~l~~sp~~~~~l~t~s-------~dg~i~vwd~~~~~~~~~~~~---~~~~~~v~~~~~spd~~~ll~sg~ 469 (502)
..+...+.+++|+| + .++++.+ .+..|++|++.+++. +..+ ..+...+..++++|+|. ++++..
T Consensus 236 ~~~~~~~~~~~~~~p-g-~~~~~~g~~~v~~~~~~~v~~~~~~~g~~--~~~~~~~~~~~~~p~~ia~~~dG~-lyvad~ 310 (329)
T 3fvz_A 236 HASFGRNVFAISYIP-G-FLFAVNGKPYFGDQEPVQGFVMNFSSGEI--IDVFKPVRKHFDMPHDIVASEDGT-VYIGDA 310 (329)
T ss_dssp CTTTTTCEEEEEEET-T-EEEEEECCCCTTCSCCCCEEEEETTTCCE--EEEECCSSSCCSSEEEEEECTTSE-EEEEES
T ss_pred ccccCCCcceeeecC-C-EEEEeCCCEEeccCCCcEEEEEEcCCCeE--EEEEcCCCCccCCeeEEEECCCCC-EEEEEC
Confidence 34566788999999 3 4444433 345899999998873 4444 35667799999999995 788888
Q ss_pred CCCcEEEEECCCC
Q 010748 470 SKGKLEIWDTLSD 482 (502)
Q Consensus 470 ~dg~i~vwd~~~~ 482 (502)
.+++|++|++...
T Consensus 311 ~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 311 HTNTVWKFTLTEK 323 (329)
T ss_dssp SSCCEEEEEEEEC
T ss_pred CCCEEEEEeCCcc
Confidence 8999999998653
No 168
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.70 E-value=9.7e-15 Score=142.16 Aligned_cols=271 Identities=10% Similarity=0.066 Sum_probs=171.2
Q ss_pred EEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC----------CCcEEEeeCCCCCCcCcce
Q 010748 167 EVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM----------EPAIEIWDLDVIDEVQPHV 236 (502)
Q Consensus 167 ~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~----------dg~I~iwdl~~~~~~~~~~ 236 (502)
.|++|+.... .+. ........| .+.+ +|+|++|++++. ++.|.+||+.+......+.
T Consensus 32 ~v~v~D~~t~---~~~--~~i~~g~~p-~i~~-------spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~ 98 (361)
T 2oiz_A 32 RVHVYDYTNG---KFL--GMVPTAFNG-HVQV-------SNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEIS 98 (361)
T ss_dssp EEEEEETTTC---CEE--EEEECCEEE-EEEE-------CTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEE
T ss_pred eEEEEECCCC---eEE--EEecCCCCC-ceEE-------CCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEE
Confidence 7777776554 332 222233334 4444 899999998863 5679999987654433222
Q ss_pred ecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEec--CCcEEEEeCCCCeeeEe-eccCCCCeE
Q 010748 237 ILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA--DKQVKIWDVAAGKCNLT-LEHHTDKVQ 313 (502)
Q Consensus 237 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~--dg~v~vwd~~~~~~~~~-~~~h~~~v~ 313 (502)
+..+ ...+......++|+|+++ +|+++.. +++|.+||+.+++.+.. +.. . ...
T Consensus 99 ~~~~---------------------~~~~g~~p~~i~~spdg~-~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~-~~~ 154 (361)
T 2oiz_A 99 LPPK---------------------RVQGLNYDGLFRQTTDGK-FIVLQNASPATSIGIVDVAKGDYVEDVTAA-A-GCW 154 (361)
T ss_dssp ECTT---------------------BCCBCCCGGGEEECTTSS-EEEEEEESSSEEEEEEETTTTEEEEEEGGG-T-TEE
T ss_pred cCcc---------------------ccccCCCcceEEECCCCC-EEEEECCCCCCeEEEEECCCCcEEEEEecC-C-Ccc
Confidence 1110 001334577899999955 6666653 68999999999998888 653 2 233
Q ss_pred EEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccce------EeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCC
Q 010748 314 AVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK------WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKS 387 (502)
Q Consensus 314 ~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~------~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~ 387 (502)
.+.+.|.+...+++.+.||.+.+|++......... +........+.+.+++. .++..+.++.|.++|+.....
T Consensus 155 ~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~v~v~d~~~~~~ 233 (361)
T 2oiz_A 155 SVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKD-KAHFVSYYGNVYSADFSGDEV 233 (361)
T ss_dssp EEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSS-EEEEEBTTSEEEEEECSSSSC
T ss_pred eeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCC-EEEEEeCCCeEEEEEecCCCc
Confidence 46678877678899999999999998653222101 01111111222344444 455566788999999875411
Q ss_pred CCCCCCCccceEEec------c----CCCeeEEEEcCCCCCEEEEEe----------CCCcEEEEECCCCCeeEEEEecC
Q 010748 388 DPDSTSQQSSFTLHA------H----DKAVCTISYNPLVPNLLATGS----------TDKMVKLWDLSNNQPSCIASRNP 447 (502)
Q Consensus 388 ~~~~~~~~~~~~~~~------h----~~~v~~l~~sp~~~~~l~t~s----------~dg~i~vwd~~~~~~~~~~~~~~ 447 (502)
.....+.. + ......++|+|++..++++.. ..+.|.+||+.+.+ .+..+..
T Consensus 234 -------~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--~v~~i~~ 304 (361)
T 2oiz_A 234 -------KVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--RVARIPG 304 (361)
T ss_dssp -------EEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE--EEEEEEC
T ss_pred -------eecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCc--EEEEEec
Confidence 11111110 0 111223789999744444444 13479999999987 4555555
Q ss_pred CCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCC--cccccc
Q 010748 448 KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD--AGISNR 488 (502)
Q Consensus 448 ~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~--~~~~~~ 488 (502)
+. +.+++|+|+|++ |++++. +.|.|||+.++ +.+.++
T Consensus 305 ~~--p~~ia~spdg~~-l~v~n~-~~v~v~D~~t~~l~~~~~i 343 (361)
T 2oiz_A 305 RD--ALSMTIDQQRNL-MLTLDG-GNVNVYDISQPEPKLLRTI 343 (361)
T ss_dssp TT--CCEEEEETTTTE-EEEECS-SCEEEEECSSSSCEEEEEE
T ss_pred CC--eeEEEECCCCCE-EEEeCC-CeEEEEECCCCcceeeEEe
Confidence 54 899999999995 666666 99999999999 877764
No 169
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.70 E-value=4.3e-16 Score=166.68 Aligned_cols=242 Identities=12% Similarity=0.147 Sum_probs=156.0
Q ss_pred CCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEE
Q 010748 206 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASA 285 (502)
Q Consensus 206 s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sg 285 (502)
+|+|.+|+++ ++.|++|++.++.... ++.++ .+..+......++|||++ .+|+.+
T Consensus 25 ~~dg~~~~~~--~~~i~~~~~~~~~~~~---~~~~~-------------------~~~~~~~~~~~~~~Spdg-~~l~~~ 79 (740)
T 4a5s_A 25 ISDHEYLYKQ--ENNILVFNAEYGNSSV---FLENS-------------------TFDEFGHSINDYSISPDG-QFILLE 79 (740)
T ss_dssp CSSSEEEEEE--TTEEEEEETTTCCEEE---EECTT-------------------TTTTCCSCCCEEEECTTS-SEEEEE
T ss_pred CCCCcEEEEc--CCcEEEEECCCCceEE---EEech-------------------hhhhhcccccceEECCCC-CEEEEE
Confidence 7999999997 8999999998754321 11110 001122233458899995 577777
Q ss_pred ecC---------CcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceE-eec---
Q 010748 286 SAD---------KQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-AVA--- 352 (502)
Q Consensus 286 s~d---------g~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~--- 352 (502)
+.+ +.+.+||+.++++. .+..|...+...+|+|+| +.|+.+ .++.|++|++.++....... ...
T Consensus 80 ~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG-~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~ 156 (740)
T 4a5s_A 80 YNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVG-HKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDII 156 (740)
T ss_dssp EEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSST-TCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTE
T ss_pred ECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCC-CEEEEE-ECCeEEEEECCCCceEEEcCCCCccce
Confidence 776 56679999998865 466678899999999999 667666 47899999998766443221 111
Q ss_pred --------------CCeeEEEeCCCCCCEEEEEeCCC-----------------------------------cEEEEECC
Q 010748 353 --------------ADVESLAWDPHAEHSFVVSLEDG-----------------------------------TIKGFDIR 383 (502)
Q Consensus 353 --------------~~v~~v~~~~~~~~~~~~~~~dg-----------------------------------~v~i~d~~ 383 (502)
+....+.|+|+|..++++...++ .|++||+.
T Consensus 157 ~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~ 236 (740)
T 4a5s_A 157 YNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTD 236 (740)
T ss_dssp EESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETT
T ss_pred ecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECC
Confidence 12245899999875444433322 46667776
Q ss_pred C---CCCCCCCCCCccceEEe------ccCCCeeEEEEcCCCCCEEEEEeC----CCcEEEEECCCCC-------eeEEE
Q 010748 384 T---AKSDPDSTSQQSSFTLH------AHDKAVCTISYNPLVPNLLATGST----DKMVKLWDLSNNQ-------PSCIA 443 (502)
Q Consensus 384 ~---~~~~~~~~~~~~~~~~~------~h~~~v~~l~~sp~~~~~l~t~s~----dg~i~vwd~~~~~-------~~~~~ 443 (502)
+ +.. .....+. +|...+..++|+|++ ++++.... +..|++||+.+++ ...+.
T Consensus 237 ~~~~~~~-------~~~~~l~~~~~~~~~~~~~~~~~wspdg-~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~ 308 (740)
T 4a5s_A 237 SLSSVTN-------ATSIQITAPASMLIGDHYLCDVTWATQE-RISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHI 308 (740)
T ss_dssp SCCSSSC-------CCEEEECCCHHHHTSCEEEEEEEEEETT-EEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEE
T ss_pred CCCCCCc-------ceEEEecCCccCCCCCeEEEEEEEeCCC-eEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEee
Confidence 5 310 0223333 277789999999998 65555432 3369999998876 11111
Q ss_pred EecCCCCcEE-----EEEEcCCCCcEEEEEe-CCC--cEEEEECCCCcc
Q 010748 444 SRNPKAGAVF-----SVAFSEDSPFVLAIGG-SKG--KLEIWDTLSDAG 484 (502)
Q Consensus 444 ~~~~~~~~v~-----~~~~spd~~~ll~sg~-~dg--~i~vwd~~~~~~ 484 (502)
...+.+.|. ...|+|||+.++...+ .+| .|++|++.++..
T Consensus 309 -~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~ 356 (740)
T 4a5s_A 309 -EMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDC 356 (740)
T ss_dssp -EECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSC
T ss_pred -eccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCce
Confidence 133444443 6889999996442444 344 588888876554
No 170
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.69 E-value=4.5e-15 Score=158.73 Aligned_cols=287 Identities=10% Similarity=0.078 Sum_probs=171.3
Q ss_pred ccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCC--
Q 010748 141 DLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSME-- 218 (502)
Q Consensus 141 ~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~d-- 218 (502)
...++.|+|++.+|+++ ++ .|+.|+...+....+...|... . ..+.+ ..+.|||||++|+.++.+
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~-----~i~~~~~~~~~~~~~~~~~~~~--~--~~~~~--~~~~~Spdg~~l~~~~~~~~ 84 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--EN-----NILVFNAEYGNSSVFLENSTFD--E--FGHSI--NDYSISPDGQFILLEYNYVK 84 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TT-----EEEEEETTTCCEEEEECTTTTT--T--CCSCC--CEEEECTTSSEEEEEEEEEE
T ss_pred cccccEECCCCcEEEEc--CC-----cEEEEECCCCceEEEEechhhh--h--hcccc--cceEECCCCCEEEEEECCee
Confidence 35678999999988886 54 5666665544222233333211 1 11111 012239999999998876
Q ss_pred -------CcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcE
Q 010748 219 -------PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQV 291 (502)
Q Consensus 219 -------g~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v 291 (502)
+.+.+||+.++... .+..|...+...+|||+| +.||.+ .++.|
T Consensus 85 ~~r~~~~~~~~~~d~~~~~~~----------------------------~l~~~~~~~~~~~~SPdG-~~la~~-~~~~i 134 (740)
T 4a5s_A 85 QWRHSYTASYDIYDLNKRQLI----------------------------TEERIPNNTQWVTWSPVG-HKLAYV-WNNDI 134 (740)
T ss_dssp CSSSCEEEEEEEEETTTTEEC----------------------------CSSCCCTTEEEEEECSST-TCEEEE-ETTEE
T ss_pred eEEEccceEEEEEECCCCcEE----------------------------EcccCCCcceeeEECCCC-CEEEEE-ECCeE
Confidence 56679999864321 233567789999999995 467776 46899
Q ss_pred EEEeCCCCeeeEe-eccCCCCe-----------------EEEEEcCCCCcEEEEEeCCC---------------------
Q 010748 292 KIWDVAAGKCNLT-LEHHTDKV-----------------QAVAWNHHSPQILLSGSFDR--------------------- 332 (502)
Q Consensus 292 ~vwd~~~~~~~~~-~~~h~~~v-----------------~~l~~~~~~~~~l~s~s~dg--------------------- 332 (502)
++|++.+++..+. ..++...+ .++.|+|+| +.|+.++.|.
T Consensus 135 ~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg-~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~ 213 (740)
T 4a5s_A 135 YVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNG-TFLAYAQFNDTEVPLIEYSFYSDESLQYPKT 213 (740)
T ss_dssp EEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTS-SEEEEEEEECTTCCEEEEEECCSTTCSSCEE
T ss_pred EEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCC-CEEEEEEEcccCCceEEEEeecCCCCCCCcc
Confidence 9999988875442 22333222 358999999 7777665321
Q ss_pred ---------------cEEEEecCC---CCC--ccceE------eecCCeeEEEeCCCCCCEEEEEeC---CCcEEEEECC
Q 010748 333 ---------------SVVMKDARI---STH--SGFKW------AVAADVESLAWDPHAEHSFVVSLE---DGTIKGFDIR 383 (502)
Q Consensus 333 ---------------~i~iwd~~~---~~~--~~~~~------~~~~~v~~v~~~~~~~~~~~~~~~---dg~v~i~d~~ 383 (502)
+|.+||+.+ +.. ..... .+...+..++|+|++..+++.... +..|.+||+.
T Consensus 214 ~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~ 293 (740)
T 4a5s_A 214 VRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYD 293 (740)
T ss_dssp EEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEE
T ss_pred eeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECC
Confidence 478888887 532 11111 134458899999997633333332 2369999998
Q ss_pred CCCCCCCCCCCccceEE--eccCCCee-----EEEEcCCCCCEEE-EEeC-CC--cEEEEECCCCCeeEEEEecCCCCcE
Q 010748 384 TAKSDPDSTSQQSSFTL--HAHDKAVC-----TISYNPLVPNLLA-TGST-DK--MVKLWDLSNNQPSCIASRNPKAGAV 452 (502)
Q Consensus 384 ~~~~~~~~~~~~~~~~~--~~h~~~v~-----~l~~sp~~~~~l~-t~s~-dg--~i~vwd~~~~~~~~~~~~~~~~~~v 452 (502)
++...... ..+..+ ..|...|. .+.|+|+| +.|+ ..+. +| .|++|++.++... .+......|
T Consensus 294 tg~~~~~~---~~~~~l~~~~~~~~v~~~~~~~p~fspDG-~~l~~~~s~~~G~~~l~~~~~~~~~~~---~lT~g~~~v 366 (740)
T 4a5s_A 294 ESSGRWNC---LVARQHIEMSTTGWVGRFRPSEPHFTLDG-NSFYKIISNEEGYRHICYFQIDKKDCT---FITKGTWEV 366 (740)
T ss_dssp TTTTEEEE---CGGGCEEEECSSSCSSSSSCCCCEECTTS-SEEEEEEECTTSCEEEEEEETTCSSCE---ESCCSSSCE
T ss_pred CCccccce---eEEEEeeeccCCceEccCcCCCceEcCCC-CEEEEEEEcCCCceEEEEEECCCCceE---ecccCCEEE
Confidence 86200000 111222 45665554 78999998 5554 5553 44 5888898877632 233334456
Q ss_pred EEEEEcCCCCcEEEEEeC----CCcEEEEEC
Q 010748 453 FSVAFSEDSPFVLAIGGS----KGKLEIWDT 479 (502)
Q Consensus 453 ~~~~~spd~~~ll~sg~~----dg~i~vwd~ 479 (502)
..+.+ +++..++++++. .+...||.+
T Consensus 367 ~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v 396 (740)
T 4a5s_A 367 IGIEA-LTSDYLYYISNEYKGMPGGRNLYKI 396 (740)
T ss_dssp EEEEE-ECSSEEEEEESCGGGCTTCBEEEEE
T ss_pred EEEEE-EeCCEEEEEEecCCCCCceeEEEEE
Confidence 55442 446656666654 234455544
No 171
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.68 E-value=3.6e-14 Score=151.04 Aligned_cols=289 Identities=10% Similarity=0.031 Sum_probs=182.7
Q ss_pred CCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCC-----cEEE
Q 010748 149 PNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEP-----AIEI 223 (502)
Q Consensus 149 p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~dg-----~I~i 223 (502)
|+|..++.....+....-.+|..+...+.. .+..........-...+ ..+.|||+|++||.++.++ .|++
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~lld~~~l~~~~~~~~----~~~~~SPDg~~la~~~~~~G~~~~~i~v 155 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEA-RVFLDPNILSDDGTVAL----RGYAFSEDGEYFAYGLSASGSDWVTIKF 155 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCC-EEEECGGGGCTTSCEEE----EEEEECTTSSEEEEEEEETTCSCEEEEE
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCc-EEEECHHHhccCCCEEE----EEEEECCCCCEEEEEEcCCCCceEEEEE
Confidence 888888887766544344677776543311 11111111111100011 1133489999999876543 8999
Q ss_pred eeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCc-------------
Q 010748 224 WDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQ------------- 290 (502)
Q Consensus 224 wdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~------------- 290 (502)
||+.++..... . .....+.+++|+|++ ..|+.++.++.
T Consensus 156 ~d~~tg~~~~~--------------------------~--~~~~~~~~~~wspDg-~~l~~~~~~~~~~~~~~~~~~~~~ 206 (710)
T 2xdw_A 156 MKVDGAKELPD--------------------------V--LERVKFSCMAWTHDG-KGMFYNAYPQQDGKSDGTETSTNL 206 (710)
T ss_dssp EETTTTEEEEE--------------------------E--EEEECSCCEEECTTS-SEEEEEECCCCSSCCSSSCCCCCC
T ss_pred EECCCCCCCcc--------------------------c--ccCcccceEEEEeCC-CEEEEEEECCccccccccccccCC
Confidence 99986543210 0 111236789999995 57777777665
Q ss_pred ---EEEEeCCCCee----eEeeccCCCCeEEEEEcCCCCcEEEEEeC-----CCcEEEEecCC------CC-CccceEee
Q 010748 291 ---VKIWDVAAGKC----NLTLEHHTDKVQAVAWNHHSPQILLSGSF-----DRSVVMKDARI------ST-HSGFKWAV 351 (502)
Q Consensus 291 ---v~vwd~~~~~~----~~~~~~h~~~v~~l~~~~~~~~~l~s~s~-----dg~i~iwd~~~------~~-~~~~~~~~ 351 (502)
|++|++.+++. +.....|...+.++.|+|++ ++|+.++. +..|.+||+.+ +. .......+
T Consensus 207 ~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg-~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~ 285 (710)
T 2xdw_A 207 HQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDG-RYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDN 285 (710)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTS-CEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECS
T ss_pred CCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCC-CEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCC
Confidence 99999988752 22333356668899999999 66665553 56899999986 43 23323333
Q ss_pred cCCeeEEEeCCCCCCEEEEEeCC---CcEEEEECCCCCCCCCCCCCccceEEeccCC--CeeEEEEcCCCCCEEEEEeCC
Q 010748 352 AADVESLAWDPHAEHSFVVSLED---GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDK--AVCTISYNPLVPNLLATGSTD 426 (502)
Q Consensus 352 ~~~v~~v~~~~~~~~~~~~~~~d---g~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~--~v~~l~~sp~~~~~l~t~s~d 426 (502)
...+.. .|+|++..+++.+..+ +.|.+||+.+.. ......+..|.. .+..++|++.+ .++++...+
T Consensus 286 ~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~-~lv~~~~~~ 356 (710)
T 2xdw_A 286 FEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPE-------ESKWKVLVPEHEKDVLEWVACVRSN-FLVLCYLHD 356 (710)
T ss_dssp SSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCC-------GGGCEEEECCCSSCEEEEEEEETTT-EEEEEEEET
T ss_pred CCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCC-------cccceeccCCCCCCeEEEEEEEcCC-EEEEEEEEC
Confidence 444444 4788877555555433 369999987651 012345555544 68889998655 788888888
Q ss_pred Cc--EEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeC---CCcEEEEECCCCc
Q 010748 427 KM--VKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGS---KGKLEIWDTLSDA 483 (502)
Q Consensus 427 g~--i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~---dg~i~vwd~~~~~ 483 (502)
+. |++|++.+++ .+..+..+.+.+..+.++|++..++++.++ .+.|++||+.+++
T Consensus 357 g~~~l~~~~~~~g~--~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 357 VKNTLQLHDLATGA--LLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp TEEEEEEEETTTCC--EEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CEEEEEEEECCCCC--EEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 85 5667876665 344555667889999999998755554443 3689999998876
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.68 E-value=6.7e-15 Score=155.40 Aligned_cols=297 Identities=9% Similarity=0.007 Sum_probs=178.4
Q ss_pred CccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccC----CCcceeeeecCCCCCCCCCCE-E
Q 010748 138 DSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIP----AFPLCMAWLDCPLKDREKGNF-M 212 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~s~~~~~-l 212 (502)
|...+..++|+++..+++.+..+. .....||.+... +....+..+...... .......|. .||+|++ |
T Consensus 22 ~~~~~~~~~~s~~~~~~~~~~~~~-~~~~~l~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~SPDg~~~l 94 (662)
T 3azo_A 22 RSGRPACVGAVGDEVWWVAPRPAE-AGRATLVRRRAD-GAEESALPAPWNVRNRVFEYSGFPWAGV-----PRPAGGPLL 94 (662)
T ss_dssp TCSCCEEEEEETTEEEEEEEETTT-TTEEEEEEECTT-SCEEESSCTTCCBCCCGGGTCCCCEEEE-----CCSSSSCEE
T ss_pred cCCccceeEEcCCeEEEEecCccc-CCcEEEEEECCC-CCcceeCCCCccccccccccCCccceee-----eecCCCeEE
Confidence 566788999998765555553222 135678887332 211112122111000 000012231 1489998 7
Q ss_pred EEecC-CCcEEEeeCC--C-CCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecC
Q 010748 213 AVGSM-EPAIEIWDLD--V-IDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD 288 (502)
Q Consensus 213 a~g~~-dg~I~iwdl~--~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~d 288 (502)
+.++. +..|.+|++. . +. ...+. . .....|...+.+++|+|++ ..|++++.+
T Consensus 95 a~~~~~~~~l~~~~~~~~g~~~-~~~l~--~--------------------~~~~~~~~~~~~~~~spDg-~~l~~~~~~ 150 (662)
T 3azo_A 95 VFTHFGDQRLYAFEPDAPGGAV-PRPLT--P--------------------VSAVGGGLRWADPVLLPER-GEVWCMAEE 150 (662)
T ss_dssp EEEBTTTCCEEEECTTSTTCCC-CEECS--C--------------------CCCSTTCEEEEEEEEETTT-TEEEEEEEE
T ss_pred EEEECCCCeEEEEcCCCCCCCC-CEecc--C--------------------CccCCCCccccCcEECCCC-CEEEEEEec
Confidence 76654 4566666654 1 11 10000 0 0000166788999999995 577777776
Q ss_pred ----------CcEEEEeCCC------CeeeEeec-cCCCCeEEEEEcCCCCcEEEEEeCC--------CcEEEEecC-CC
Q 010748 289 ----------KQVKIWDVAA------GKCNLTLE-HHTDKVQAVAWNHHSPQILLSGSFD--------RSVVMKDAR-IS 342 (502)
Q Consensus 289 ----------g~v~vwd~~~------~~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~s~d--------g~i~iwd~~-~~ 342 (502)
..|++||+.+ ++. ..+. .+...+..++|+|+| +.|+.++.+ ..|.+||+. ++
T Consensus 151 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG-~~la~~~~~~~~~~~~~~~i~~~d~~~~g 228 (662)
T 3azo_A 151 FTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDG-RQAVWLAWDHPRMPWEGTELKTARVTEDG 228 (662)
T ss_dssp ECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTS-SEEEEEEECTTCCTTTCEEEEEEEECTTS
T ss_pred ccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCC-CEEEEEECCCCCCCCCCcEEEEEEECCCC
Confidence 5899999988 554 4454 566788889999999 777766644 479999998 45
Q ss_pred ---CCccceEeecCCeeEEEeCCCCCCEEEEEeCCC--cEEEEECCCCCCCCCCCCCccceEEeccC-CC--------ee
Q 010748 343 ---THSGFKWAVAADVESLAWDPHAEHSFVVSLEDG--TIKGFDIRTAKSDPDSTSQQSSFTLHAHD-KA--------VC 408 (502)
Q Consensus 343 ---~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg--~v~i~d~~~~~~~~~~~~~~~~~~~~~h~-~~--------v~ 408 (502)
........+...+..+.|+|++. +++++..++ .|.+||+.++ . ...+..+. .. +.
T Consensus 229 ~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~---------~-~~~l~~~~~~~~~p~w~~~~~ 297 (662)
T 3azo_A 229 RFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATG---------A-ATQLCRREEEFAGPLWTPGMR 297 (662)
T ss_dssp CEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTC---------C-EEESSCCSSBSSCCCCSTTCC
T ss_pred cccccEEeCCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCC---------c-eeecccccccccCccccccCc
Confidence 22222223357899999999987 888888888 5666666443 1 12222221 11 56
Q ss_pred EEEEcCCCCCEEEEEeCCCcEEEE--ECCCCCeeEEEEecCCCCcEEEE-EEcCCCCcEEEEEeCCC--cEEEEECCCCc
Q 010748 409 TISYNPLVPNLLATGSTDKMVKLW--DLSNNQPSCIASRNPKAGAVFSV-AFSEDSPFVLAIGGSKG--KLEIWDTLSDA 483 (502)
Q Consensus 409 ~l~~sp~~~~~l~t~s~dg~i~vw--d~~~~~~~~~~~~~~~~~~v~~~-~~spd~~~ll~sg~~dg--~i~vwd~~~~~ 483 (502)
+++|+|++ .++++++. +.++|| |+.+++ +..+..+.+.+..+ +++++. .++++++.+. .|.+||+.+++
T Consensus 298 ~~~~~~~~-~~~~~~~~-~~~~l~~~d~~~~~---~~~l~~~~~~~~~~~s~~~~~-~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 298 WFAPLANG-LIAVVHGK-GAAVLGILDPESGE---LVDAAGPWTEWAATLTVSGTR-AVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp SEEECTTS-CEEEEEBS-SSCEEEEEETTTTE---EEECCSSCCEEEEEEEEETTE-EEEEEEETTEEEEEEEEETTTCC
T ss_pred eEeEeCCC-EEEEEEEc-CccEEEEEECCCCc---EEEecCCCCeEEEEEecCCCE-EEEEEcCCCCCCEEEEEECCCCc
Confidence 78999987 89999988 999999 555554 45566667777776 554433 2344445454 45666776665
Q ss_pred c
Q 010748 484 G 484 (502)
Q Consensus 484 ~ 484 (502)
.
T Consensus 372 ~ 372 (662)
T 3azo_A 372 A 372 (662)
T ss_dssp E
T ss_pred e
Confidence 4
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.67 E-value=1e-13 Score=133.18 Aligned_cols=269 Identities=9% Similarity=0.030 Sum_probs=172.3
Q ss_pred cccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCC
Q 010748 140 EDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEP 219 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~dg 219 (502)
..|.++.|+|....++....++ .+++|.-. .+.... .-...+.++.| +++|++++++..++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-------~~~~~~--~~~~~~~~~~~-------~~~g~l~~~~~~~~ 66 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISES---ELQTITAE-------PWLEIS--KKGLQLEGLNF-------DRQGQLFLLDVFEG 66 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGG---GSCEEECE-------EEEEEE--SSCCCEEEEEE-------CTTSCEEEEETTTC
T ss_pred cccceeeecCCccceeEEeecc---cCcccccc-------eeEEEe--ccCccccCcEE-------CCCCCEEEEECCCC
Confidence 3477888898888777665554 34444111 111100 01123456666 78899888888899
Q ss_pred cEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecC----CcEEEEe
Q 010748 220 AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD----KQVKIWD 295 (502)
Q Consensus 220 ~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~d----g~v~vwd 295 (502)
.|.+|+..+..... ....+...+.+++|++++ .+++++..+ +.|.+||
T Consensus 67 ~i~~~d~~~~~~~~---------------------------~~~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~i~~~d 118 (333)
T 2dg1_A 67 NIFKINPETKEIKR---------------------------PFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGGIFAAT 118 (333)
T ss_dssp EEEEECTTTCCEEE---------------------------EEECSSSSEEEEEECTTS-CEEEEECTTSSSCCEEEEEC
T ss_pred EEEEEeCCCCcEEE---------------------------EeeCCCCCcceEEECCCC-cEEEEeCCCCCCCceEEEEe
Confidence 99999986532110 111345679999999994 567666665 6899999
Q ss_pred CCCCeeeEeec--cCCCCeEEEEEcCCCCcEEEEEeC------CCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCE
Q 010748 296 VAAGKCNLTLE--HHTDKVQAVAWNHHSPQILLSGSF------DRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHS 367 (502)
Q Consensus 296 ~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~ 367 (502)
..+++....+. .+...+.++.++|++ +++++... .+.|..++..+..... .......+..++|+|++..+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l 196 (333)
T 2dg1_A 119 ENGDNLQDIIEDLSTAYCIDDMVFDSKG-GFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKVL 196 (333)
T ss_dssp TTSCSCEEEECSSSSCCCEEEEEECTTS-CEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSEE
T ss_pred CCCCEEEEEEccCccCCcccceEECCCC-CEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccceEECCCCCEE
Confidence 98876543332 245679999999998 66666553 3556666655443322 22334567899999987645
Q ss_pred EEEEeCCCcEEEEECCCCCCCCCCCCCccce--------EEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCe
Q 010748 368 FVVSLEDGTIKGFDIRTAKSDPDSTSQQSSF--------TLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 439 (502)
Q Consensus 368 ~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~--------~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~ 439 (502)
+++.+.++.|.+|++.+.. ..+. .+..+ ..+..+++++++ +++++...++.|.+||.. ++.
T Consensus 197 ~v~~~~~~~i~~~d~~~~g--------~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G-~l~v~~~~~~~v~~~d~~-g~~ 265 (333)
T 2dg1_A 197 WVTETTANRLHRIALEDDG--------VTIQPFGATIPYYFTGH-EGPDSCCIDSDD-NLYVAMYGQGRVLVFNKR-GYP 265 (333)
T ss_dssp EEEEGGGTEEEEEEECTTS--------SSEEEEEEEEEEECCSS-SEEEEEEEBTTC-CEEEEEETTTEEEEECTT-SCE
T ss_pred EEEeCCCCeEEEEEecCCC--------cCcccccceEEEecCCC-CCCCceEECCCC-CEEEEEcCCCEEEEECCC-CCE
Confidence 5666678899999986421 1111 11122 467889999988 777777778899999984 442
Q ss_pred eEEEEecCCC------CcEEEEEEcCCCCcEEEEEeC
Q 010748 440 SCIASRNPKA------GAVFSVAFSEDSPFVLAIGGS 470 (502)
Q Consensus 440 ~~~~~~~~~~------~~v~~~~~spd~~~ll~sg~~ 470 (502)
+..+..+. ..+.+++|+|++..+++++..
T Consensus 266 --~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 266 --IGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp --EEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred --EEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 23332222 268899999998755544443
No 174
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.66 E-value=8.7e-14 Score=135.40 Aligned_cols=263 Identities=14% Similarity=0.134 Sum_probs=170.1
Q ss_pred cccccCCCceEEEEEec------CCcceeEEEEEecCCCCCCCeeeeecccc-------CCCcceeeeecCCCCCCCCCC
Q 010748 144 DMTINPNDAVIVCARNE------DDVSHLEVYILEESDGGDPNLYVHHHIII-------PAFPLCMAWLDCPLKDREKGN 210 (502)
Q Consensus 144 ~~~~~p~~~~l~~~~~~------~~~~~l~v~~~~~~~~~~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~s~~~~ 210 (502)
.+.|+|++++|.++... ++ ..-.|.+|+.... .+ .....+ ...|..+.+ +|+|+
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~-~~~~v~v~d~~t~---~~--~~~i~~~~~~~~~g~~p~~i~~-------spdg~ 120 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGK-RSDVVEVWDADKL---TF--EKEISLPPKRVQGLNYDGLFRQ-------TTDGK 120 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSC-EEEEEEEEETTTC---CE--EEEEEECTTBCCBCCCGGGEEE-------CTTSS
T ss_pred ceEECCCCCEEEEEEecccccccCC-CCCEEEEEECcCC---cE--EEEEEcCccccccCCCcceEEE-------CCCCC
Confidence 78999999999988641 00 0114555555432 21 122222 134455544 89999
Q ss_pred EEEEecC--CCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecC
Q 010748 211 FMAVGSM--EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD 288 (502)
Q Consensus 211 ~la~g~~--dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~d 288 (502)
+|+++.. ++.|.+||+.+...+... . .+ .....+.+.|.+...+++.+.|
T Consensus 121 ~l~v~n~~~~~~v~v~d~~~~~~~~~~--------------------------i-~~-~~~~~v~~~p~~~~~~~~~~~d 172 (361)
T 2oiz_A 121 FIVLQNASPATSIGIVDVAKGDYVEDV--------------------------T-AA-AGCWSVIPQPNRPRSFMTICGD 172 (361)
T ss_dssp EEEEEEESSSEEEEEEETTTTEEEEEE--------------------------G-GG-TTEEEEEECTTSSSEEEEEETT
T ss_pred EEEEECCCCCCeEEEEECCCCcEEEEE--------------------------e-cC-CCcceeEEcCCCCeeEEEECCC
Confidence 9999874 579999999864221110 0 01 1122355777766788899999
Q ss_pred CcEEEEeCCC-CeeeE------eeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccce-Ee----------
Q 010748 289 KQVKIWDVAA-GKCNL------TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK-WA---------- 350 (502)
Q Consensus 289 g~v~vwd~~~-~~~~~------~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~---------- 350 (502)
|.+.+|++.. ++... .+..+..++ .+.+++++ ..++..+.++.|.++|+......... +.
T Consensus 173 g~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g-~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
T 2oiz_A 173 GGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDK-DKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKN 250 (361)
T ss_dssp SSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECS-SEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTT
T ss_pred CcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccC-CEEEEEeCCCeEEEEEecCCCceecccccccCccccccc
Confidence 9999999865 55441 222222222 23345666 55666778999999999765432111 11
Q ss_pred -ecCCeeEEEeCCCCCCEEEEEe----------CCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCE
Q 010748 351 -VAADVESLAWDPHAEHSFVVSL----------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNL 419 (502)
Q Consensus 351 -~~~~v~~v~~~~~~~~~~~~~~----------~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~ 419 (502)
.......++|+|++..++++.. ..+.|.+||+.+. +.+.++..+. +.+++|+|++ ++
T Consensus 251 ~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~---------~~v~~i~~~~--p~~ia~spdg-~~ 318 (361)
T 2oiz_A 251 WVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK---------QRVARIPGRD--ALSMTIDQQR-NL 318 (361)
T ss_dssp CEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT---------EEEEEEECTT--CCEEEEETTT-TE
T ss_pred cccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC---------cEEEEEecCC--eeEEEECCCC-CE
Confidence 0122223789998775444443 1347999999986 7778888777 9999999998 68
Q ss_pred EEEEeCCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCC
Q 010748 420 LATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSP 462 (502)
Q Consensus 420 l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~ 462 (502)
|++++. +.|.+||+.++++..+..+..+......++++|+|.
T Consensus 319 l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 319 MLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred EEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 887776 999999999984336666656667788999999986
No 175
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.65 E-value=5.5e-14 Score=130.68 Aligned_cols=235 Identities=11% Similarity=0.061 Sum_probs=161.4
Q ss_pred CCCCCEEE-EecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEE
Q 010748 206 REKGNFMA-VGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 284 (502)
Q Consensus 206 s~~~~~la-~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~s 284 (502)
+++|++++ +.+.++.|.+|+....... .....+...+.+|++.+++ .++++
T Consensus 32 ~~~g~l~v~~~~~~~~i~~~~~~~~~~~---------------------------~~~~~~~~~p~~i~~~~~g-~l~v~ 83 (270)
T 1rwi_B 32 DSAGNVYVTSEGMYGRVVKLATGSTGTT---------------------------VLPFNGLYQPQGLAVDGAG-TVYVT 83 (270)
T ss_dssp CTTCCEEEEECSSSCEEEEECC-----E---------------------------ECCCCSCCSCCCEEECTTC-CEEEE
T ss_pred CCCCCEEEEccCCCCcEEEecCCCcccc---------------------------eEeeCCcCCcceeEECCCC-CEEEE
Confidence 78888777 5577899999987532110 0011233567889999984 45555
Q ss_pred EecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCC
Q 010748 285 ASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHA 364 (502)
Q Consensus 285 gs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~ 364 (502)
.. ++.|.+||................+.++++.+++ +++++...++.|.+|+..+.............+..+++++++
T Consensus 84 ~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g 161 (270)
T 1rwi_B 84 DF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQG-AVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSG 161 (270)
T ss_dssp ET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTC-CEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTC
T ss_pred cC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCC-CEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCC
Confidence 55 8899999987654432222233678999999988 777777778899999765543322111223457889999977
Q ss_pred CCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEE
Q 010748 365 EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS 444 (502)
Q Consensus 365 ~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~ 444 (502)
. ++++...++.|.+|+.... ........+...+.++++++++ .++++...++.|.+|+...... ...
T Consensus 162 ~-l~v~~~~~~~i~~~~~~~~---------~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~~~--~~~ 228 (270)
T 1rwi_B 162 N-VYVTDTDNNRVVKLEAESN---------NQVVLPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGSTTS--TVL 228 (270)
T ss_dssp C-EEEEEGGGTEEEEECTTTC---------CEEECCCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECTTCSCC--EEC
T ss_pred C-EEEEECCCCEEEEEecCCC---------ceEeecccCCCCceEEEECCCC-CEEEEECCCCcEEEEcCCCCcc--eee
Confidence 5 6666667889999998764 2111122233668899999988 8888877788999999876542 222
Q ss_pred ecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcc
Q 010748 445 RNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 484 (502)
Q Consensus 445 ~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~ 484 (502)
...+...+.+++++++|. ++++...++.|++|++...+.
T Consensus 229 ~~~~~~~p~~i~~~~~g~-l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 229 PFTGLNTPLAVAVDSDRT-VYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp CCCSCSCEEEEEECTTCC-EEEEEGGGTEEEEECCCGGGS
T ss_pred ccCCCCCceeEEECCCCC-EEEEECCCCEEEEEcCCCccc
Confidence 223335689999999997 788888899999999876554
No 176
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.65 E-value=3.8e-14 Score=150.45 Aligned_cols=284 Identities=9% Similarity=-0.012 Sum_probs=179.0
Q ss_pred cCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCC---CcceeeeecCCCCCCCCCCEEE-----EecCCC
Q 010748 148 NPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPA---FPLCMAWLDCPLKDREKGNFMA-----VGSMEP 219 (502)
Q Consensus 148 ~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~s~~~~~la-----~g~~dg 219 (502)
+|+|..++....++....-.+|..+...+.. ............ ....+. |||+|++|| .|+.+.
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~l~d~~~~a~~~~~~~~~~~-------~SPDG~~la~~~~~~G~~~~ 147 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQE-KVLLDPNGWSKDGTVSLGTWA-------VSWDGKKVAFAQKPNAADEA 147 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCC-EEEECGGGSSSSSCEEEEEEE-------ECTTSSEEEEEEEETTCSCC
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCc-EEEEchHHhccCCCEEEEEEE-------ECCCCCEEEEEECCCCCceE
Confidence 4889998888876643455788877543311 111111110000 012333 389999999 444557
Q ss_pred cEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccc--eeeEEeccCCCcEEEEEecCCc-------
Q 010748 220 AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDS--VLGLAWNKEFRNILASASADKQ------- 290 (502)
Q Consensus 220 ~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~--V~~l~~~~~~~~~l~sgs~dg~------- 290 (502)
.|++||+.++..+.. .+... ...++|+|++ ..|+.++.+..
T Consensus 148 ~i~v~dl~tg~~~~~-----------------------------~~~~~~~~~~~~wspDg-~~l~~~~~d~~~~~~~~~ 197 (695)
T 2bkl_A 148 VLHVIDVDSGEWSKV-----------------------------DVIEGGKYATPKWTPDS-KGFYYEWLPTDPSIKVDE 197 (695)
T ss_dssp EEEEEETTTCCBCSS-----------------------------CCBSCCTTCCCEECTTS-SEEEEEECCCCTTSCGGG
T ss_pred EEEEEECCCCCCcCC-----------------------------cccCcccccceEEecCC-CEEEEEEecCCCCCcccc
Confidence 899999987543210 01111 2678999995 57778887766
Q ss_pred ------EEEEeCCCCe----eeEeeccCCCCeEEEEEcCCCCcEEEEEeCCC----cEEEEecCCCCCccceEeecCCee
Q 010748 291 ------VKIWDVAAGK----CNLTLEHHTDKVQAVAWNHHSPQILLSGSFDR----SVVMKDARISTHSGFKWAVAADVE 356 (502)
Q Consensus 291 ------v~vwd~~~~~----~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg----~i~iwd~~~~~~~~~~~~~~~~v~ 356 (502)
|++|++.+++ ++.....|...+.++.|+|+| ++|+.++.++ .|.+|+..+... .........+.
T Consensus 198 ~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~~ 275 (695)
T 2bkl_A 198 RPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDG-KYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGAKY 275 (695)
T ss_dssp GGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTS-CCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSCCE
T ss_pred CCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCC-CEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCceE
Confidence 9999998876 333444566788999999999 6666555544 566666544433 22344455566
Q ss_pred EEEeCCCCCCEEEEEe---CCCcEEEEECCCCCCCCCCCCCccceEEecc--CCCeeEEEEcCCCCCEEEEEeCCCcEEE
Q 010748 357 SLAWDPHAEHSFVVSL---EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH--DKAVCTISYNPLVPNLLATGSTDKMVKL 431 (502)
Q Consensus 357 ~v~~~~~~~~~~~~~~---~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h--~~~v~~l~~sp~~~~~l~t~s~dg~i~v 431 (502)
...| +++. +++.+. .++.|.+||+.++.. .....+..| ...+..++|+ .+ .++++...++..+|
T Consensus 276 ~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~-------~~~~~l~~~~~~~~l~~~~~~-~~-~lv~~~~~dg~~~l 344 (695)
T 2bkl_A 276 EVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPAR-------ASWKEIVPEDSSASLLSVSIV-GG-HLSLEYLKDATSEV 344 (695)
T ss_dssp EEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSG-------GGCEEEECCCSSCEEEEEEEE-TT-EEEEEEEETTEEEE
T ss_pred EEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCc-------cCCeEEecCCCCCeEEEEEEE-CC-EEEEEEEECCEEEE
Confidence 6667 5566 555554 357899999876510 112344433 4457888888 34 78889999998888
Q ss_pred EECC-CCCeeEEEEecCC-CCcEEEEEEcCCCCcEEEEEeC---CCcEEEEECCCCcc
Q 010748 432 WDLS-NNQPSCIASRNPK-AGAVFSVAFSEDSPFVLAIGGS---KGKLEIWDTLSDAG 484 (502)
Q Consensus 432 wd~~-~~~~~~~~~~~~~-~~~v~~~~~spd~~~ll~sg~~---dg~i~vwd~~~~~~ 484 (502)
|.+. .++ ....+..+ .+.+..++++|++..++++.++ .+.|++||+.+++.
T Consensus 345 ~~~~~~g~--~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 345 RVATLKGK--PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EEEETTCC--EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EEEeCCCC--eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 7654 233 23344443 6678889999999755544433 36799999988763
No 177
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.65 E-value=1e-13 Score=134.00 Aligned_cols=264 Identities=12% Similarity=0.093 Sum_probs=165.2
Q ss_pred cccccccccCCCceEEEEEecC----CcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEe
Q 010748 140 EDLEDMTINPNDAVIVCARNED----DVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~----~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g 215 (502)
..+..+.+ +|+.|+...... +...-.||+++...+ ..... ....+..| ||+|++||.+
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~---~~~~l------~~~~~~~~-------SpDg~~la~~ 76 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNN---ARRFI------ENATMPRI-------SPDGKKIAFM 76 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTC---CEEEE------ESCEEEEE-------CTTSSEEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCC---ceEEc------ccCCCeEE-------CCCCCEEEEE
Confidence 45667777 888887764321 112347888876654 21111 22244555 8999999987
Q ss_pred cCC---C--cEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEec---
Q 010748 216 SME---P--AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA--- 287 (502)
Q Consensus 216 ~~d---g--~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~--- 287 (502)
+.+ + .|.+|++.++... .+..+.. +.+++|+|++. .|+.++.
T Consensus 77 ~~~~~~~~~~l~~~~~~~g~~~----------------------------~l~~~~~-~~~~~wspdg~-~l~~~~~~~~ 126 (347)
T 2gop_A 77 RANEEKKVSEIWVADLETLSSK----------------------------KILEAKN-IRSLEWNEDSR-KLLIVGFKRR 126 (347)
T ss_dssp EEETTTTEEEEEEEETTTTEEE----------------------------EEEEESE-EEEEEECTTSS-EEEEEEECCC
T ss_pred EeccCCCcceEEEEECCCCceE----------------------------EEEcCCC-ccceeECCCCC-EEEEEEccCC
Confidence 654 3 3777777642211 0111223 89999999954 5666553
Q ss_pred ------------------------CCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCC-------cEEE
Q 010748 288 ------------------------DKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDR-------SVVM 336 (502)
Q Consensus 288 ------------------------dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg-------~i~i 336 (502)
...|.+||+.+++.+..+.. . .+..+.|+|++ +++++..++ ...+
T Consensus 127 ~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l 202 (347)
T 2gop_A 127 EDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDI 202 (347)
T ss_dssp C---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEE
T ss_pred CcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe--EEEEEecccccccccccccE
Confidence 25799999998887455554 3 78899999998 666666542 4455
Q ss_pred EecCCCCCccceEeecCCeeEEEeCCCCCCEEEEEeCC-------CcEEEEECCCCCCCCCCCCCccceEEeccCCCeeE
Q 010748 337 KDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLED-------GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCT 409 (502)
Q Consensus 337 wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~d-------g~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 409 (502)
|.+.++. ....... ..+.. ++|++..+++++... ..|.+|| ++ ........|...+..
T Consensus 203 ~~~d~~~-~~~l~~~-~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~---------~~~~l~~~~~~~~~~ 267 (347)
T 2gop_A 203 YIWEDGK-EEKMFEK-VSFYA--VDSDGERILLYGKPEKKYMSEHNKLYIYD--GK---------EVMGILDEVDRGVGQ 267 (347)
T ss_dssp EEEETTE-EEEEEEE-ESEEE--EEECSSCEEEEECCSSSCCCSSCEEEEEC--SS---------CEEESSTTCCSEEEE
T ss_pred EEeCCCc-eEEeccC-cceee--ECCCCCEEEEEEccccCCccccceEEEEC--CC---------ceEeccccCCcccCC
Confidence 5444333 2222333 44444 388887555554332 4688888 32 222223345677876
Q ss_pred -EEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcE-EEEECC
Q 010748 410 -ISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKL-EIWDTL 480 (502)
Q Consensus 410 -l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i-~vwd~~ 480 (502)
+.|+ ++ ++++++.++.++|| +.+++. ..+..+.+.|.+++|+| . ++++++.++.. .||.+.
T Consensus 268 ~~~~s-dg--~~~~~~~~~~~~l~-~~~g~~---~~~~~~~~~v~~~~~s~--~-~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 268 AKIKD-GK--VYFTLFEEGSVNLY-IWDGEI---KPIAKGRHWIMGFDVDE--I-VVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEET-TE--EEEEEEETTEEEEE-EESSSE---EEEECSSSEEEEEEESS--S-EEEEEECSSSCCEEEEES
T ss_pred ccEEc-Cc--EEEEEecCCcEEEE-EcCCce---EEEecCCCeEEeeeeeC--c-EEEEEcCCCChHHheEeC
Confidence 8998 64 88889999999999 875543 22333467899999999 4 56667776654 777776
No 178
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.65 E-value=2.9e-14 Score=137.02 Aligned_cols=257 Identities=10% Similarity=0.104 Sum_probs=172.2
Q ss_pred cccccccccCCCceEEEEEecCCcc-------------------eeEEEEEecCCCCCCCeeeeeccccCCCcceeeeec
Q 010748 140 EDLEDMTINPNDAVIVCARNEDDVS-------------------HLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLD 200 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~-------------------~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 200 (502)
..+..++++|+|+++++.+.+.... .-.|++++...+ .+...-....-..|..+++
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g---~~~~~~~~~~~~~p~gia~-- 98 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNA---EILQSSGKNLFYLPHGLSI-- 98 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTC---CEEEEECTTTCSSEEEEEE--
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCC---eEEeccCCCccCCceEEEE--
Confidence 4688999999999998877653110 014777776544 3322111111123455554
Q ss_pred CCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCc
Q 010748 201 CPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRN 280 (502)
Q Consensus 201 ~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~ 280 (502)
+++|+++++.+.++.|++|+.+.... ....++... ..-.-.++-....+|+++|+++.
T Consensus 99 -----d~~g~l~v~d~~~~~v~~~~~~g~~~--~~~~~~~~~---------------~~g~~~~~~~~P~~ia~~~~~g~ 156 (329)
T 3fvz_A 99 -----DTDGNYWVTDVALHQVFKLDPHSKEG--PLLILGRSM---------------QPGSDQNHFCQPTDVAVEPSTGA 156 (329)
T ss_dssp -----CTTSCEEEEETTTTEEEEECTTCSSC--CSEEESBTT---------------BCCCSTTCCSSEEEEEECTTTCC
T ss_pred -----CCCCCEEEEECCCCEEEEEeCCCCeE--EEEEecccC---------------CCCCCccccCCCcEEEEeCCCCe
Confidence 78999999999899999999864210 111111100 00001235567899999994366
Q ss_pred EEEEEe-cCCcEEEEeCCCCeeeEeeccCC----------CCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceE
Q 010748 281 ILASAS-ADKQVKIWDVAAGKCNLTLEHHT----------DKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW 349 (502)
Q Consensus 281 ~l~sgs-~dg~v~vwd~~~~~~~~~~~~h~----------~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 349 (502)
++++.+ .++.|++|+ .+++.+..+.... .....|+++|++..++++...++.|++|+..+++......
T Consensus 157 lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~ 235 (329)
T 3fvz_A 157 VFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIK 235 (329)
T ss_dssp EEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred EEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEe
Confidence 777776 689999999 5677777764322 3489999999844888888899999999998665443221
Q ss_pred --eecCCeeEEEeCCCCCCEEEEE-------eCCCcEEEEECCCCCCCCCCCCCccceEE---eccCCCeeEEEEcCCCC
Q 010748 350 --AVAADVESLAWDPHAEHSFVVS-------LEDGTIKGFDIRTAKSDPDSTSQQSSFTL---HAHDKAVCTISYNPLVP 417 (502)
Q Consensus 350 --~~~~~v~~v~~~~~~~~~~~~~-------~~dg~v~i~d~~~~~~~~~~~~~~~~~~~---~~h~~~v~~l~~sp~~~ 417 (502)
.+...+..++|+| + ..+.+. ..+..|++|+..++ ..+..+ ..+...+.+|+++|++
T Consensus 236 ~~~~~~~~~~~~~~p-g-~~~~~~g~~~v~~~~~~~v~~~~~~~g---------~~~~~~~~~~~~~~~p~~ia~~~dG- 303 (329)
T 3fvz_A 236 HASFGRNVFAISYIP-G-FLFAVNGKPYFGDQEPVQGFVMNFSSG---------EIIDVFKPVRKHFDMPHDIVASEDG- 303 (329)
T ss_dssp CTTTTTCEEEEEEET-T-EEEEEECCCCTTCSCCCCEEEEETTTC---------CEEEEECCSSSCCSSEEEEEECTTS-
T ss_pred ccccCCCcceeeecC-C-EEEEeCCCEEeccCCCcEEEEEEcCCC---------eEEEEEcCCCCccCCeeEEEECCCC-
Confidence 2345688899998 2 222222 23458999999876 555555 3566778999999998
Q ss_pred CEEEEEeCCCcEEEEECCC
Q 010748 418 NLLATGSTDKMVKLWDLSN 436 (502)
Q Consensus 418 ~~l~t~s~dg~i~vwd~~~ 436 (502)
.++++...++.|++|++..
T Consensus 304 ~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 304 TVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEEESSSCCEEEEEEEE
T ss_pred CEEEEECCCCEEEEEeCCc
Confidence 8999999999999999754
No 179
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.63 E-value=6.3e-15 Score=145.01 Aligned_cols=234 Identities=9% Similarity=0.017 Sum_probs=150.6
Q ss_pred CCCCCCCCEEEEecCC---CcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCC
Q 010748 203 LKDREKGNFMAVGSME---PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFR 279 (502)
Q Consensus 203 ~~~s~~~~~la~g~~d---g~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~ 279 (502)
+.|+|+|++||..... ..|.+|++.++.... ...++......+.|+|+ +
T Consensus 41 ~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~---------------------------l~~~~~~~~~~~~~spd-g 92 (396)
T 3c5m_A 41 KCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQ---------------------------LTEGKGDNTFGGFISTD-E 92 (396)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEE---------------------------CCCSSCBCTTTCEECTT-S
T ss_pred CcCCCCCCEEEEEEecCCCceEEEEECCCCcEEE---------------------------eecCCCCccccceECCC-C
Confidence 4458999998877543 367788876532110 11122223334789999 4
Q ss_pred cEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEE-------------------EEEcCCCCcEEEEE-----eCCCcEE
Q 010748 280 NILASASADKQVKIWDVAAGKCNLTLEHHTDKVQA-------------------VAWNHHSPQILLSG-----SFDRSVV 335 (502)
Q Consensus 280 ~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~-------------------l~~~~~~~~~l~s~-----s~dg~i~ 335 (502)
..|+.++.++.|++||+.+++....+..+...... +.|+|++ ..++.+ ..+..|.
T Consensus 93 ~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~~~~~~~~l~ 171 (396)
T 3c5m_A 93 RAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLT-SWEKFAEFYHTNPTCRLI 171 (396)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCC-SHHHHHHHHHTCCCEEEE
T ss_pred CEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCC-cceeeeeeccCCCcceEE
Confidence 58888888889999999988766555544443222 3466776 444332 4567899
Q ss_pred EEecCCCCCccceEeecCCeeEEEeCC-CCCCEEEEEeCC------CcEEEEECCCCCCCCCCCCCccceEEecc--CCC
Q 010748 336 MKDARISTHSGFKWAVAADVESLAWDP-HAEHSFVVSLED------GTIKGFDIRTAKSDPDSTSQQSSFTLHAH--DKA 406 (502)
Q Consensus 336 iwd~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~~~~~~d------g~v~i~d~~~~~~~~~~~~~~~~~~~~~h--~~~ 406 (502)
+||+.++.... .......+..+.|+| ++.. ++..+.+ ..|.+|++... ....+..+ ...
T Consensus 172 ~~d~~~g~~~~-~~~~~~~~~~~~~sp~dg~~-l~~~~~~~~~~~~~~l~~~d~~~~----------~~~~l~~~~~~~~ 239 (396)
T 3c5m_A 172 KVDIETGELEV-IHQDTAWLGHPIYRPFDDST-VGFCHEGPHDLVDARMWLVNEDGS----------NVRKIKEHAEGES 239 (396)
T ss_dssp EEETTTCCEEE-EEEESSCEEEEEEETTEEEE-EEEEECSCSSSCSCCCEEEETTSC----------CCEESSCCCTTEE
T ss_pred EEECCCCcEEe-eccCCcccccceECCCCCCE-EEEEecCCCCCCCceEEEEECCCC----------ceeEeeccCCCcc
Confidence 99998866543 345667789999999 5653 4443333 36888888654 12222222 235
Q ss_pred eeEEEEcCCCCCEEEEEeCC-----CcEEEEECCCCCeeEEEEecCCCCcEEEEEEcC-CCCcEEEEEe-----------
Q 010748 407 VCTISYNPLVPNLLATGSTD-----KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSE-DSPFVLAIGG----------- 469 (502)
Q Consensus 407 v~~l~~sp~~~~~l~t~s~d-----g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~sp-d~~~ll~sg~----------- 469 (502)
+..++|+|++ ..|+.++.+ +.|++||+.+++...+..... .. +.|+| ++++ |++++
T Consensus 240 ~~~~~~spdg-~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~----~~-~~~s~~dg~~-l~~~~~~~p~~~~~~~ 312 (396)
T 3c5m_A 240 CTHEFWIPDG-SAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP----CS-HLMSNFDGSL-MVGDGCDAPVDVADAD 312 (396)
T ss_dssp EEEEEECTTS-SCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS----EE-EEEECSSSSE-EEEEECCC--------
T ss_pred ccceEECCCC-CEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC----CC-CCccCCCCce-EEEecCCcceeecccc
Confidence 7889999998 555554433 449999999887544443332 23 89999 9994 65543
Q ss_pred -----CCCcEEEEECCCCcc
Q 010748 470 -----SKGKLEIWDTLSDAG 484 (502)
Q Consensus 470 -----~dg~i~vwd~~~~~~ 484 (502)
.++.|++||+.++..
T Consensus 313 ~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 313 SYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp --CCCCCCEEEEEETTTTBC
T ss_pred ccccCCCCcEEEEecccCce
Confidence 346899999987764
No 180
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.63 E-value=2.5e-12 Score=121.01 Aligned_cols=281 Identities=10% Similarity=0.082 Sum_probs=183.6
Q ss_pred ccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCC
Q 010748 139 SEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSME 218 (502)
Q Consensus 139 ~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~d 218 (502)
...+.++.+.|+|+++++....+ .|+.++.. . .+...........|.++.+ +++|+++++...+
T Consensus 14 ~~~~~~i~~d~~g~l~v~~~~~~-----~v~~~d~~-~---~~~~~~~~~~~~~~~~i~~-------~~~g~l~v~~~~~ 77 (299)
T 2z2n_A 14 DTGPYGITVSDKGKVWITQHKAN-----MISCINLD-G---KITEYPLPTPDAKVMCLTI-------SSDGEVWFTENAA 77 (299)
T ss_dssp SCCEEEEEECTTSCEEEEETTTT-----EEEEECTT-C---CEEEEECSSTTCCEEEEEE-------CTTSCEEEEETTT
T ss_pred CCCccceEECCCCCEEEEecCCC-----cEEEEcCC-C---CeEEecCCcccCceeeEEE-------CCCCCEEEeCCCC
Confidence 35688999999999887765444 67777655 3 2222111111234455544 6789888887778
Q ss_pred CcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeCCC
Q 010748 219 PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAA 298 (502)
Q Consensus 219 g~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~ 298 (502)
+.|..|+... . ... .....+...+.++++.++ +.++++...++.|.+||. +
T Consensus 78 ~~i~~~~~~g-~-~~~-------------------------~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~d~-~ 128 (299)
T 2z2n_A 78 NKIGRITKKG-I-IKE-------------------------YTLPNPDSAPYGITEGPN-GDIWFTEMNGNRIGRITD-D 128 (299)
T ss_dssp TEEEEECTTS-C-EEE-------------------------EECSSTTCCEEEEEECTT-SCEEEEETTTTEEEEECT-T
T ss_pred CeEEEECCCC-c-EEE-------------------------EeCCCcCCCceeeEECCC-CCEEEEecCCceEEEECC-C
Confidence 8899998751 1 100 001123456889999998 457777667889999998 5
Q ss_pred CeeeEe-eccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceE-eecCCeeEEEeCCCCCCEEEEEeCCCc
Q 010748 299 GKCNLT-LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-AVAADVESLAWDPHAEHSFVVSLEDGT 376 (502)
Q Consensus 299 ~~~~~~-~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~v~~v~~~~~~~~~~~~~~~dg~ 376 (502)
++.... +..+...+.++++.+++ .++++...++.|..||. ++....... .....+..+++++++. ++++....+.
T Consensus 129 g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~ 205 (299)
T 2z2n_A 129 GKIREYELPNKGSYPSFITLGSDN-ALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDA-LWFVEIIGNK 205 (299)
T ss_dssp CCEEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTE
T ss_pred CCEEEecCCCCCCCCceEEEcCCC-CEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCC-EEEEccCCce
Confidence 544332 23345678999999998 77777767789999998 444322111 1234578999999764 5666556789
Q ss_pred EEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCcEEEEE
Q 010748 377 IKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVA 456 (502)
Q Consensus 377 v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~ 456 (502)
|.+|+. ++. ........+...+.++++++++ .++++...++.|.+||. ++.. .......+...+.+++
T Consensus 206 i~~~~~-~g~--------~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~-~g~~-~~~~~~~~~~~~~~i~ 273 (299)
T 2z2n_A 206 IGRITT-SGE--------ITEFKIPTPNARPHAITAGAGI-DLWFTEWGANKIGRLTS-NNII-EEYPIQIKSAEPHGIC 273 (299)
T ss_dssp EEEECT-TCC--------EEEEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEEET-TTEE-EEEECSSSSCCEEEEE
T ss_pred EEEECC-CCc--------EEEEECCCCCCCceeEEECCCC-CEEEeccCCceEEEECC-CCce-EEEeCCCCCCccceEE
Confidence 999998 541 1122233455678999999987 66666667789999998 3432 2333344556799999
Q ss_pred EcCCCCcEEEEEeCCCcEEEEECCCC
Q 010748 457 FSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 457 ~spd~~~ll~sg~~dg~i~vwd~~~~ 482 (502)
+ +++. ++++ +..+.|..++..++
T Consensus 274 ~-~~g~-l~v~-~~~~~l~~~~~~~~ 296 (299)
T 2z2n_A 274 F-DGET-IWFA-MECDKIGKLTLIKD 296 (299)
T ss_dssp E-CSSC-EEEE-ETTTEEEEEEEC--
T ss_pred e-cCCC-EEEE-ecCCcEEEEEcCcc
Confidence 9 8887 4554 34677888887654
No 181
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.60 E-value=6.8e-13 Score=124.50 Aligned_cols=242 Identities=12% Similarity=0.126 Sum_probs=160.9
Q ss_pred CccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeecc----ccCCCcceeeeecCCCCCCCCCCEEE
Q 010748 138 DSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHI----IIPAFPLCMAWLDCPLKDREKGNFMA 213 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~s~~~~~la 213 (502)
+-....+++++|+++++++...++ .|+.|+.... .+...... .....|.++++. .+++++++
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~-----~i~~~d~~g~---~~~~~~~~~~~~~~~~~p~~i~~~------~~~g~l~v 93 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNH-----RIQIFDKEGR---FKFQFGECGKRDSQLLYPNRVAVV------RNSGDIIV 93 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGT-----EEEEECTTSC---EEEEECCBSSSTTCBSSEEEEEEE------TTTTEEEE
T ss_pred ccCCCceEEECCCCCEEEEECCCC-----EEEEECCCCc---EEEEecccCCCcccccCceEEEEE------cCCCeEEE
Confidence 345678899999999888877665 6777765432 22111100 001234455442 35677777
Q ss_pred EecC-CCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEE
Q 010748 214 VGSM-EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVK 292 (502)
Q Consensus 214 ~g~~-dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~ 292 (502)
+... ++.|++|+.+ +..+.. ....+...+.++++.+++ +++++...++.|.
T Consensus 94 ~~~~~~~~i~~~d~~-g~~~~~--------------------------~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~ 145 (286)
T 1q7f_A 94 TERSPTHQIQIYNQY-GQFVRK--------------------------FGATILQHPRGVTVDNKG-RIIVVECKVMRVI 145 (286)
T ss_dssp EECGGGCEEEEECTT-SCEEEE--------------------------ECTTTCSCEEEEEECTTS-CEEEEETTTTEEE
T ss_pred EcCCCCCEEEEECCC-CcEEEE--------------------------ecCccCCCceEEEEeCCC-CEEEEECCCCEEE
Confidence 6643 7899999943 221110 011244568899999984 5777777889999
Q ss_pred EEeCCCCeeeEeec--cCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeec---CCeeEEEeCCCCCCE
Q 010748 293 IWDVAAGKCNLTLE--HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVA---ADVESLAWDPHAEHS 367 (502)
Q Consensus 293 vwd~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~---~~v~~v~~~~~~~~~ 367 (502)
+|+.. ++.+..+. .+...+.++++++++ +++++.+.++.|++|+.... ... ..... ..+..+++++++ ++
T Consensus 146 ~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~g~-~~~-~~~~~g~~~~p~~i~~d~~G-~l 220 (286)
T 1q7f_A 146 IFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQ-EIFISDNRAHCVKVFNYEGQ-YLR-QIGGEGITNYPIGVGINSNG-EI 220 (286)
T ss_dssp EECTT-SCEEEEEECTTTCSSEEEEEECSSS-EEEEEEGGGTEEEEEETTCC-EEE-EESCTTTSCSEEEEEECTTC-CE
T ss_pred EEcCC-CCEEEEeCCCCccCCcEEEEECCCC-CEEEEECCCCEEEEEcCCCC-EEE-EEccCCccCCCcEEEECCCC-CE
Confidence 99964 56666653 345678999999998 77777778999999997542 221 22222 468899999986 46
Q ss_pred EEEEeCCC-cEEEEECCCCCCCCCCCCCccceEEeccC--CCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCC
Q 010748 368 FVVSLEDG-TIKGFDIRTAKSDPDSTSQQSSFTLHAHD--KAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 438 (502)
Q Consensus 368 ~~~~~~dg-~v~i~d~~~~~~~~~~~~~~~~~~~~~h~--~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~ 438 (502)
+++...++ .|.+|+... ..+..+..+. ..+.+++++|++ +++++ +.++.|++|++....
T Consensus 221 ~v~~~~~~~~i~~~~~~g----------~~~~~~~~~~~~~~~~~i~~~~~g-~l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 221 LIADNHNNFNLTIFTQDG----------QLISALESKVKHAQCFDVALMDDG-SVVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp EEEECSSSCEEEEECTTS----------CEEEEEEESSCCSCEEEEEEETTT-EEEEE-ETTTEEEEEECSCCC
T ss_pred EEEeCCCCEEEEEECCCC----------CEEEEEcccCCCCcceeEEECCCC-cEEEE-CCCCeEEEEEccccc
Confidence 77776675 999999542 4445555443 347799999987 66666 579999999986644
No 182
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.60 E-value=4.9e-13 Score=137.03 Aligned_cols=311 Identities=10% Similarity=0.039 Sum_probs=198.0
Q ss_pred ccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCC----CCCCEEEEec
Q 010748 141 DLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDR----EKGNFMAVGS 216 (502)
Q Consensus 141 ~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s----~~~~~la~g~ 216 (502)
....+.|+|++++|.+++.++ .|++++.... .......+.....|..+++ + |+|+++++++
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg-----~V~viD~~~~---t~~~v~~i~~G~~P~~ia~-------s~~~~pDGk~l~v~n 262 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDG-----KVNMIDLWMK---EPTTVAEIKIGSEARSIET-------SKMEGWEDKYAIAGA 262 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTS-----EEEEEETTSS---SCCEEEEEECCSEEEEEEE-------CCSTTCTTTEEEEEE
T ss_pred CccceEECCCCCEEEEEcCCC-----eEEEEECCCC---CCcEeEEEecCCCCceeEE-------ccccCCCCCEEEEEE
Confidence 345789999999999887654 6777776311 1122233444455555555 6 6999988877
Q ss_pred CC-CcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCccc-ceeeEEeccCCCcEEEEEecCCcEEEE
Q 010748 217 ME-PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTD-SVLGLAWNKEFRNILASASADKQVKIW 294 (502)
Q Consensus 217 ~d-g~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~V~~l~~~~~~~~~l~sgs~dg~v~vw 294 (502)
.. +.|.|+|..+.+.+....+.+. .......|.. .+..+..++++..++++....|.|.++
T Consensus 263 ~~~~~v~ViD~~t~~~~~~i~~~~~-----------------~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~v 325 (567)
T 1qks_A 263 YWPPQYVIMDGETLEPKKIQSTRGM-----------------TYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLV 325 (567)
T ss_dssp EETTEEEEEETTTCCEEEEEECCEE-----------------CTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEE
T ss_pred ccCCeEEEEECCCCcEEEEEecccc-----------------ccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEE
Confidence 54 8999999877554432221110 0000011333 677888888877677777778999999
Q ss_pred eCCCCee--eEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEee-c---CCeeEEE-eCCCCCCE
Q 010748 295 DVAAGKC--NLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV-A---ADVESLA-WDPHAEHS 367 (502)
Q Consensus 295 d~~~~~~--~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-~---~~v~~v~-~~~~~~~~ 367 (502)
|....+. +..+ ........+.|+|++..++++...++.|.++|+.+.+..... .. . .+-..+. ++|++..+
T Consensus 326 d~~~~~~~~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i-~vgg~~Phpg~g~~~~~p~~g~v 403 (567)
T 1qks_A 326 DYTDLNNLKTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIE-DTGGQTPHPGRGANFVHPTFGPV 403 (567)
T ss_dssp ETTCSSEEEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEE-ECSSSSBCCTTCEEEEETTTEEE
T ss_pred ecCCCccceeeee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEE-eccCcCCCCccceeeECCCCCcE
Confidence 9876543 2223 234567789999999444455557899999999987654322 22 1 1111222 57765545
Q ss_pred EEEEe-CCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeC-------CCcEEEEECCCC--
Q 010748 368 FVVSL-EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST-------DKMVKLWDLSNN-- 437 (502)
Q Consensus 368 ~~~~~-~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~-------dg~i~vwd~~~~-- 437 (502)
++++. .++.|.++|..+..... ...+.+.++......-..+.++|++ .+|.+... .++|.|||+.+.
T Consensus 404 ~~t~~~g~~~Vsvid~~~~~~~~--~~~kvv~~i~~~g~g~~~i~~~p~~-~~l~v~~~~~~~~~~~~~v~v~d~~~~~~ 480 (567)
T 1qks_A 404 WATSHMGDDSVALIGTDPEGHPD--NAWKILDSFPALGGGSLFIKTHPNS-QYLYVDATLNPEAEISGSVAVFDIKAMTG 480 (567)
T ss_dssp EEEEBSSSSEEEEEECCTTTCTT--TBTSEEEEEECSCSCCCCEECCTTC-SEEEEECTTCSSHHHHTCEEEEEGGGCCC
T ss_pred EEeCCCCCCeEEEecCCCCCCcc--ccCEEEEEEecCCCCCEEEEeCCCC-CeEEEecCCCCCcccCceEEEEECCcccc
Confidence 55554 56899999998732110 0024566666554444567899998 56666542 358999999876
Q ss_pred ---CeeEEEEec--------CCCCcEEEEEEcCCCCcEEEEEe----CCCcEEEEECCCCccccccc
Q 010748 438 ---QPSCIASRN--------PKAGAVFSVAFSEDSPFVLAIGG----SKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 438 ---~~~~~~~~~--------~~~~~v~~~~~spd~~~ll~sg~----~dg~i~vwd~~~~~~~~~~~ 489 (502)
.. ....+. .....+..+.|+|+|.+++++.. .++.|.|+|..+.+.+.++-
T Consensus 481 ~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~ 546 (567)
T 1qks_A 481 DGSDP-EFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIK 546 (567)
T ss_dssp SSSCC-CEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred cccCC-CcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeC
Confidence 21 111221 12357899999999998777644 37899999999998776554
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.58 E-value=4.9e-13 Score=126.25 Aligned_cols=227 Identities=10% Similarity=0.055 Sum_probs=153.9
Q ss_pred CCCCC-EEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEE
Q 010748 206 REKGN-FMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 284 (502)
Q Consensus 206 s~~~~-~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~s 284 (502)
+|+|+ +++++..++.|.+|+..+. .. .+..+...+.++++++++ .++++
T Consensus 36 d~~g~~l~~~~~~~~~i~~~~~~~~--~~---------------------------~~~~~~~~~~~l~~~~dg-~l~v~ 85 (296)
T 3e5z_A 36 VPARSAVIFSDVRQNRTWAWSDDGQ--LS---------------------------PEMHPSHHQNGHCLNKQG-HLIAC 85 (296)
T ss_dssp EGGGTEEEEEEGGGTEEEEEETTSC--EE---------------------------EEESSCSSEEEEEECTTC-CEEEE
T ss_pred eCCCCEEEEEeCCCCEEEEEECCCC--eE---------------------------EEECCCCCcceeeECCCC-cEEEE
Confidence 68888 7888888999999998753 11 122355678999999984 57777
Q ss_pred EecCCcEEEEeCCCCeeeEeeccC----CCCeEEEEEcCCCCcEEEEEeC-----------------CCcEEEEecCCCC
Q 010748 285 ASADKQVKIWDVAAGKCNLTLEHH----TDKVQAVAWNHHSPQILLSGSF-----------------DRSVVMKDARIST 343 (502)
Q Consensus 285 gs~dg~v~vwd~~~~~~~~~~~~h----~~~v~~l~~~~~~~~~l~s~s~-----------------dg~i~iwd~~~~~ 343 (502)
...++.|.+||..+++........ ...+..++++|+| +++++.+. .+.|..++.. .
T Consensus 86 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G-~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~--g 162 (296)
T 3e5z_A 86 SHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDG-SLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD--G 162 (296)
T ss_dssp ETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTS-CEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT--S
T ss_pred ecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCC-CEEEECCccccccccccccccccCCCcEEEEECCC--C
Confidence 666789999999888754433221 2356789999999 77776321 2355555544 2
Q ss_pred CccceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCcc---ceEEeccCCCeeEEEEcCCCCCEE
Q 010748 344 HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQS---SFTLHAHDKAVCTISYNPLVPNLL 420 (502)
Q Consensus 344 ~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~---~~~~~~h~~~v~~l~~sp~~~~~l 420 (502)
..............++|+|++.. +++.+.++.|.+|++... ... ...+..+...+.+++++++| +++
T Consensus 163 ~~~~~~~~~~~~~gi~~s~dg~~-lv~~~~~~~i~~~~~~~~--------g~~~~~~~~~~~~~~~p~~i~~d~~G-~l~ 232 (296)
T 3e5z_A 163 TLSAPIRDRVKPNGLAFLPSGNL-LVSDTGDNATHRYCLNAR--------GETEYQGVHFTVEPGKTDGLRVDAGG-LIW 232 (296)
T ss_dssp CEEEEECCCSSEEEEEECTTSCE-EEEETTTTEEEEEEECSS--------SCEEEEEEEECCSSSCCCSEEEBTTS-CEE
T ss_pred CEEEeecCCCCCccEEECCCCCE-EEEeCCCCeEEEEEECCC--------CcCcCCCeEeeCCCCCCCeEEECCCC-CEE
Confidence 22223344556789999998874 577788899999998732 121 12223355667899999998 666
Q ss_pred EEEeCCCcEEEEECCCCCeeEEEEecCCCCcEEEEEE-cCCCCcEEEEEeCCCcEEEEECCCCc
Q 010748 421 ATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAF-SEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 421 ~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-spd~~~ll~sg~~dg~i~vwd~~~~~ 483 (502)
++. ++.|.+|+.. ++ .+..+..+.. +.+++| .|++.. |.+++.+ .+.-++..+..
T Consensus 233 v~~--~~~v~~~~~~-g~--~~~~~~~~~~-~~~~~f~~~d~~~-L~v~t~~-~l~~~~~~~~~ 288 (296)
T 3e5z_A 233 ASA--GDGVHVLTPD-GD--ELGRVLTPQT-TSNLCFGGPEGRT-LYMTVST-EFWSIETNVRG 288 (296)
T ss_dssp EEE--TTEEEEECTT-SC--EEEEEECSSC-CCEEEEESTTSCE-EEEEETT-EEEEEECSCCB
T ss_pred EEc--CCeEEEECCC-CC--EEEEEECCCC-ceeEEEECCCCCE-EEEEcCC-eEEEEEccccc
Confidence 555 7889999986 44 3444555555 889999 688885 5555554 45566665544
No 184
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.58 E-value=5.1e-14 Score=148.65 Aligned_cols=249 Identities=10% Similarity=-0.031 Sum_probs=150.6
Q ss_pred ccccc--CCCce-EEEEEecCCcceeEEEEEecC--C-CCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC
Q 010748 144 DMTIN--PNDAV-IVCARNEDDVSHLEVYILEES--D-GGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM 217 (502)
Q Consensus 144 ~~~~~--p~~~~-l~~~~~~~~~~~l~v~~~~~~--~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~ 217 (502)
.+.|+ |+|+. |+.+... ..+||.++.. . .....+..............++| +|+|++|++++.
T Consensus 81 ~~~~~~SPDg~~~la~~~~~----~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~-------spDg~~l~~~~~ 149 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFG----DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVL-------LPERGEVWCMAE 149 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTT----TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEE-------ETTTTEEEEEEE
T ss_pred cceeeeecCCCeEEEEEECC----CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEE-------CCCCCEEEEEEe
Confidence 44454 99999 7766533 2478888865 2 21111111100000111234455 899999999887
Q ss_pred C----------CcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCccccccccc-CcccceeeEEeccCCCcEEEEEe
Q 010748 218 E----------PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKG-SHTDSVLGLAWNKEFRNILASAS 286 (502)
Q Consensus 218 d----------g~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~l~~~~~~~~~l~sgs 286 (502)
+ ..|++|++.+..... ......+. .+...+..++|+|+| .+|+.++
T Consensus 150 ~~~~~~~~~~~~~i~~~~~~~~~~~~----------------------~~~~~~l~~~~~~~~~~~~~SpDG-~~la~~~ 206 (662)
T 3azo_A 150 EFTGEGPSDVRRFLAAVPLDGSAAAD----------------------RSAVRELSDDAHRFVTGPRLSPDG-RQAVWLA 206 (662)
T ss_dssp EECSSSTTCEEEEEEEEETTSTTTTC----------------------GGGSEESSCSCSSEECCCEECTTS-SEEEEEE
T ss_pred cccCCCCCCceeEEEEEECCCCcccc----------------------CCceeEEEecCCCcccCceECCCC-CEEEEEE
Confidence 6 589999987510000 00001122 345678889999995 4777766
Q ss_pred cC--------CcEEEEeCC-CC---eeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCC--cEEEEecCCCCCccceEeec
Q 010748 287 AD--------KQVKIWDVA-AG---KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDR--SVVMKDARISTHSGFKWAVA 352 (502)
Q Consensus 287 ~d--------g~v~vwd~~-~~---~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg--~i~iwd~~~~~~~~~~~~~~ 352 (502)
.+ ..|++||+. ++ +......+|...+..+.|+|+| ++++++..++ .|.+|++.++........+.
T Consensus 207 ~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg-~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~ 285 (662)
T 3azo_A 207 WDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDG-SLIVATDRTGWWNLHRVDPATGAATQLCRREE 285 (662)
T ss_dssp ECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTS-CEEEEECTTSSCEEEEECTTTCCEEESSCCSS
T ss_pred CCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCC-eEEEEECCCCCeEEEEEECCCCceeecccccc
Confidence 55 379999998 57 4444445567889999999999 5888888888 56666664544322111111
Q ss_pred C--------CeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEE-EEcCCCCCEEE-E
Q 010748 353 A--------DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTI-SYNPLVPNLLA-T 422 (502)
Q Consensus 353 ~--------~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l-~~sp~~~~~l~-t 422 (502)
. .+.+++|+|++. ++++++. +.+++|.+... ...+..+..|...+..+ ++++ ..+++ +
T Consensus 286 ~~~~p~w~~~~~~~~~~~~~~-~~~~~~~-~~~~l~~~d~~--------~~~~~~l~~~~~~~~~~~s~~~--~~~~~~~ 353 (662)
T 3azo_A 286 EFAGPLWTPGMRWFAPLANGL-IAVVHGK-GAAVLGILDPE--------SGELVDAAGPWTEWAATLTVSG--TRAVGVA 353 (662)
T ss_dssp BSSCCCCSTTCCSEEECTTSC-EEEEEBS-SSCEEEEEETT--------TTEEEECCSSCCEEEEEEEEET--TEEEEEE
T ss_pred cccCccccccCceEeEeCCCE-EEEEEEc-CccEEEEEECC--------CCcEEEecCCCCeEEEEEecCC--CEEEEEE
Confidence 1 146788888654 7888888 99999944322 12356667777777777 5544 34444 4
Q ss_pred EeCCC--cEEEEECCCCCe
Q 010748 423 GSTDK--MVKLWDLSNNQP 439 (502)
Q Consensus 423 ~s~dg--~i~vwd~~~~~~ 439 (502)
++.+. .|.+||+.+++.
T Consensus 354 ~~~~~~~~i~~~d~~~g~~ 372 (662)
T 3azo_A 354 ASPRTAYEVVELDTVTGRA 372 (662)
T ss_dssp EETTEEEEEEEEETTTCCE
T ss_pred cCCCCCCEEEEEECCCCce
Confidence 44444 466667777764
No 185
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.56 E-value=2.8e-12 Score=121.85 Aligned_cols=248 Identities=10% Similarity=0.080 Sum_probs=161.8
Q ss_pred cceeeeecCCCCCCCCCCEEEE-------ecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCc
Q 010748 193 PLCMAWLDCPLKDREKGNFMAV-------GSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSH 265 (502)
Q Consensus 193 ~~~~~~~~~~~~~s~~~~~la~-------g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h 265 (502)
|.+++| +++++++++ ++.++.|.+|+..++.... .. .....++
T Consensus 20 ~~~~~~-------~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~-~~----------------------~~~~~~~ 69 (314)
T 1pjx_A 20 AEGPVF-------DKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTV-IC----------------------KPEVNGY 69 (314)
T ss_dssp CEEEEE-------CTTSCEEEEETTCEETTEECCEEEEECTTTCCEEE-EE----------------------CCEETTE
T ss_pred ccCceE-------CCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEE-EE----------------------ecccCCC
Confidence 456666 678888888 6778999999976532210 00 0001134
Q ss_pred ccceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEe-ecc----CCCCeEEEEEcCCCCcEEEEEeCC---------
Q 010748 266 TDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLT-LEH----HTDKVQAVAWNHHSPQILLSGSFD--------- 331 (502)
Q Consensus 266 ~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~-~~~----h~~~v~~l~~~~~~~~~l~s~s~d--------- 331 (502)
...+.+++++++++.+++ ++..+.|.+||.. ++.... ... ....+.++++.+++ +++++...+
T Consensus 70 ~~~~~~i~~~~~~g~l~v-~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~~ 146 (314)
T 1pjx_A 70 GGIPAGCQCDRDANQLFV-ADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEG-NLWITAPAGEVAPADYTR 146 (314)
T ss_dssp ECCEEEEEECSSSSEEEE-EETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTS-CEEEEECBCBCTTSCCCB
T ss_pred CCCCceEEEecCCCcEEE-EECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCC-CEEEEecCcccccccccc
Confidence 567899999998333444 4444579999988 765433 221 12358899999998 777666554
Q ss_pred ------CcEEEEecCCCCCccceEeecCCeeEEEeC----CCCCCEEEEEeCCCcEEEEECC-CCCCCCCCCCCccceEE
Q 010748 332 ------RSVVMKDARISTHSGFKWAVAADVESLAWD----PHAEHSFVVSLEDGTIKGFDIR-TAKSDPDSTSQQSSFTL 400 (502)
Q Consensus 332 ------g~i~iwd~~~~~~~~~~~~~~~~v~~v~~~----~~~~~~~~~~~~dg~v~i~d~~-~~~~~~~~~~~~~~~~~ 400 (502)
+.|..|+.. ++ .............++|+ |++..++++...++.|.+|++. .+.... ......+
T Consensus 147 ~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~----~~~~~~~ 220 (314)
T 1pjx_A 147 SMQEKFGSIYCFTTD-GQ-MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIEN----KKVWGHI 220 (314)
T ss_dssp TTSSSCEEEEEECTT-SC-EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEE----EEEEEEC
T ss_pred cccCCCCeEEEECCC-CC-EEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCcccc----ceEEEEC
Confidence 567777665 32 22233344567889999 9775455555678899999976 221000 0122223
Q ss_pred eccC-CCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEEC
Q 010748 401 HAHD-KAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 479 (502)
Q Consensus 401 ~~h~-~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~ 479 (502)
..+. ..+..+++++++ +++++...++.|.+||..+++... .+..+...+.+++|+|++.+++++...++.|..|++
T Consensus 221 ~~~~~~~p~~i~~d~~G-~l~v~~~~~~~i~~~d~~~g~~~~--~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 221 PGTHEGGADGMDFDEDN-NLLVANWGSSHIEVFGPDGGQPKM--RIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp CCCSSCEEEEEEEBTTC-CEEEEEETTTEEEEECTTCBSCSE--EEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CCCCCCCCCceEECCCC-CEEEEEcCCCEEEEEcCCCCcEeE--EEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 3333 567889999988 888887788899999998665322 333445679999999999866666666789999998
Q ss_pred CCC
Q 010748 480 LSD 482 (502)
Q Consensus 480 ~~~ 482 (502)
...
T Consensus 298 ~~~ 300 (314)
T 1pjx_A 298 QRN 300 (314)
T ss_dssp SSC
T ss_pred CCC
Confidence 754
No 186
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.56 E-value=4.6e-12 Score=129.84 Aligned_cols=279 Identities=12% Similarity=0.070 Sum_probs=182.5
Q ss_pred CCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCC-
Q 010748 149 PNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLD- 227 (502)
Q Consensus 149 p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~- 227 (502)
|.+.++++...++ .|++++.... .+. ..+.+...|.++.+ +|+|++|++++.++.|.+||+.
T Consensus 165 ~~~~~~V~~~~~~-----~V~viD~~t~---~v~--~~i~~g~~p~~v~~-------SpDGr~lyv~~~dg~V~viD~~~ 227 (567)
T 1qks_A 165 LENLFSVTLRDAG-----QIALIDGSTY---EIK--TVLDTGYAVHISRL-------SASGRYLFVIGRDGKVNMIDLWM 227 (567)
T ss_dssp GGGEEEEEETTTT-----EEEEEETTTC---CEE--EEEECSSCEEEEEE-------CTTSCEEEEEETTSEEEEEETTS
T ss_pred CCceEEEEeCCCC-----eEEEEECCCC---eEE--EEEeCCCCccceEE-------CCCCCEEEEEcCCCeEEEEECCC
Confidence 4344444444444 7777876654 222 22233334444443 8999999999999999999985
Q ss_pred -CCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEec----cCCCcEEEEEecCCcEEEEeCCCCeee
Q 010748 228 -VIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWN----KEFRNILASASADKQVKIWDVAAGKCN 302 (502)
Q Consensus 228 -~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~----~~~~~~l~sgs~dg~v~vwd~~~~~~~ 302 (502)
+...+. .... ......++|+ |+++.++++...+++|.|+|..+.+.+
T Consensus 228 ~t~~~v~---------------------------~i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~ 279 (567)
T 1qks_A 228 KEPTTVA---------------------------EIKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPK 279 (567)
T ss_dssp SSCCEEE---------------------------EEEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEE
T ss_pred CCCcEeE---------------------------EEec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEE
Confidence 322111 1111 1235789999 686655666667799999999999888
Q ss_pred Eeecc----------CCC-CeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCcc-ceEeecCCeeEEEeCCCCCCEEEE
Q 010748 303 LTLEH----------HTD-KVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG-FKWAVAADVESLAWDPHAEHSFVV 370 (502)
Q Consensus 303 ~~~~~----------h~~-~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~-~~~~~~~~v~~v~~~~~~~~~~~~ 370 (502)
.++.. |.. .+..+..++.++.++++....|.|.++|........ ...........+.|+|++..++++
T Consensus 280 ~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va 359 (567)
T 1qks_A 280 KIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITA 359 (567)
T ss_dssp EEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEE
T ss_pred EEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEE
Confidence 77642 222 678899999887777777788999999987654222 122334557788999998866666
Q ss_pred EeCCCcEEEEECCCCCCCCCCCCCccceEEec-----cCCCeeEEEEcCCCCCEEEEEe-CCCcEEEEECCCCC-----e
Q 010748 371 SLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA-----HDKAVCTISYNPLVPNLLATGS-TDKMVKLWDLSNNQ-----P 439 (502)
Q Consensus 371 ~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~l~~sp~~~~~l~t~s-~dg~i~vwd~~~~~-----~ 439 (502)
...++.|.++|+.+. +.+..+.. |.+.-..+ ++|+++.+.+++. .++.|.++|....+ .
T Consensus 360 ~~~sn~V~ViD~~t~---------kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~ 429 (567)
T 1qks_A 360 ANARNKLVVIDTKEG---------KLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAW 429 (567)
T ss_dssp EGGGTEEEEEETTTT---------EEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBT
T ss_pred eCCCCeEEEEECCCC---------cEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccC
Confidence 777899999999986 44444433 33222222 5787535556654 46899999998722 2
Q ss_pred eEEEEecCCCCcEEEEEEcCCCCcEEEEEeC------CCcEEEEECCCC
Q 010748 440 SCIASRNPKAGAVFSVAFSEDSPFVLAIGGS------KGKLEIWDTLSD 482 (502)
Q Consensus 440 ~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~------dg~i~vwd~~~~ 482 (502)
..+..+....+.-..+.++|+++++.+.... .+.|.|+|+.+.
T Consensus 430 kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 430 KILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp SEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred EEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 2445554433333457789999975554311 358999999876
No 187
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.56 E-value=2.9e-12 Score=136.28 Aligned_cols=254 Identities=9% Similarity=0.022 Sum_probs=165.4
Q ss_pred CccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC
Q 010748 138 DSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM 217 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~ 217 (502)
+...+..+.|||+|++||.+...+......||+++...+ ...... ........+.| +|||+.|+.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg---~~~~~~--~~~~~~~~~~w-------spDg~~l~~~~~ 190 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGA---KELPDV--LERVKFSCMAW-------THDGKGMFYNAY 190 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTT---EEEEEE--EEEECSCCEEE-------CTTSSEEEEEEC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCC---CCCccc--ccCcccceEEE-------EeCCCEEEEEEE
Confidence 334678899999999999887765433346777776554 222110 00001234566 899999999988
Q ss_pred CCc----------------EEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcE
Q 010748 218 EPA----------------IEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNI 281 (502)
Q Consensus 218 dg~----------------I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~ 281 (502)
++. |++|++.+..... ........|...+..+.|+|+++ +
T Consensus 191 ~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~-----------------------~~v~~~~~~~~~~~~~~~SpDg~-~ 246 (710)
T 2xdw_A 191 PQQDGKSDGTETSTNLHQKLYYHVLGTDQSED-----------------------ILCAEFPDEPKWMGGAELSDDGR-Y 246 (710)
T ss_dssp CCCSSCCSSSCCCCCCCCEEEEEETTSCGGGC-----------------------EEEECCTTCTTCEEEEEECTTSC-E
T ss_pred CCccccccccccccCCCCEEEEEECCCCcccc-----------------------eEEeccCCCCeEEEEEEEcCCCC-E
Confidence 765 9999987532110 01111123556688999999965 5
Q ss_pred EEEEec-----CCcEEEEeCCC------Ce-eeEeeccCCCCeEEEEEcCCCCcEEEEEeCC---CcEEEEecCCCCC--
Q 010748 282 LASASA-----DKQVKIWDVAA------GK-CNLTLEHHTDKVQAVAWNHHSPQILLSGSFD---RSVVMKDARISTH-- 344 (502)
Q Consensus 282 l~sgs~-----dg~v~vwd~~~------~~-~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~d---g~i~iwd~~~~~~-- 344 (502)
|+.++. +..|++||+.+ +. ....+..+...+.. .|+|++..+++.+..+ +.|.+||+.++..
T Consensus 247 l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~ 325 (710)
T 2xdw_A 247 VLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESK 325 (710)
T ss_dssp EEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGG
T ss_pred EEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccc
Confidence 555543 56899999986 43 35566666666655 4888884444444433 3699999987642
Q ss_pred ccceEeecC--CeeEEEeCCCCCCEEEEEeCCCc--EEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEE
Q 010748 345 SGFKWAVAA--DVESLAWDPHAEHSFVVSLEDGT--IKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLL 420 (502)
Q Consensus 345 ~~~~~~~~~--~v~~v~~~~~~~~~~~~~~~dg~--v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 420 (502)
......+.. .+..++|++. ..++++...++. |.+|++.++ ..+..+..+.+.+.++.++|++..++
T Consensus 326 ~~~l~~~~~~~~~~~~~~~~~-~~lv~~~~~~g~~~l~~~~~~~g---------~~~~~l~~~~~~v~~~~~s~d~~~l~ 395 (710)
T 2xdw_A 326 WKVLVPEHEKDVLEWVACVRS-NFLVLCYLHDVKNTLQLHDLATG---------ALLKIFPLEVGSVVGYSGQKKDTEIF 395 (710)
T ss_dssp CEEEECCCSSCEEEEEEEETT-TEEEEEEEETTEEEEEEEETTTC---------CEEEEECCCSSEEEEEECCTTCSEEE
T ss_pred ceeccCCCCCCeEEEEEEEcC-CEEEEEEEECCEEEEEEEECCCC---------CEEEecCCCCceEEEEecCCCCCEEE
Confidence 122333333 5778899864 457778888885 566676554 45566777778889999999874555
Q ss_pred EEEeC---CCcEEEEECCCCC
Q 010748 421 ATGST---DKMVKLWDLSNNQ 438 (502)
Q Consensus 421 ~t~s~---dg~i~vwd~~~~~ 438 (502)
++.+. .+.|++||+.+++
T Consensus 396 ~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 396 YQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEECSSCCCEEEEEETTSSS
T ss_pred EEEeCCCCCCEEEEEECCCCc
Confidence 55443 4789999998876
No 188
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.55 E-value=8.8e-13 Score=126.54 Aligned_cols=235 Identities=9% Similarity=0.017 Sum_probs=160.2
Q ss_pred CCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEec
Q 010748 208 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA 287 (502)
Q Consensus 208 ~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~ 287 (502)
+++++++...++.|.+||..++..+..+ ........+++++++ .++++...
T Consensus 53 ~~~lyv~~~~~~~v~viD~~t~~~~~~i----------------------------~~~~~p~~i~~~~~g-~lyv~~~~ 103 (328)
T 3dsm_A 53 DGIGWIVVNNSHVIFAIDINTFKEVGRI----------------------------TGFTSPRYIHFLSDE-KAYVTQIW 103 (328)
T ss_dssp TTEEEEEEGGGTEEEEEETTTCCEEEEE----------------------------ECCSSEEEEEEEETT-EEEEEEBS
T ss_pred CCEEEEEEcCCCEEEEEECcccEEEEEc----------------------------CCCCCCcEEEEeCCC-eEEEEECC
Confidence 4556666666799999999864432211 123567889998884 45555447
Q ss_pred CCcEEEEeCCCCeeeEeeccCC-----CCeEEEEEcCCCCcEEEEEe-CCCcEEEEecCCCCCccceEeecCCeeEEEeC
Q 010748 288 DKQVKIWDVAAGKCNLTLEHHT-----DKVQAVAWNHHSPQILLSGS-FDRSVVMKDARISTHSGFKWAVAADVESLAWD 361 (502)
Q Consensus 288 dg~v~vwd~~~~~~~~~~~~h~-----~~v~~l~~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~ 361 (502)
++.|.+||+.+++....+.... .....|++ ..+ .++++.. .++.|.++|+.+.+... ..........++++
T Consensus 104 ~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~-~lyv~~~~~~~~v~viD~~t~~~~~-~i~~g~~p~~i~~~ 180 (328)
T 3dsm_A 104 DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGK-YVYVNCWSYQNRILKIDTETDKVVD-ELTIGIQPTSLVMD 180 (328)
T ss_dssp CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETT-EEEEEECTTCCEEEEEETTTTEEEE-EEECSSCBCCCEEC
T ss_pred CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECC-EEEEEcCCCCCEEEEEECCCCeEEE-EEEcCCCccceEEc
Confidence 8999999999999887775322 14567777 333 4444443 48999999999876544 33445567788999
Q ss_pred CCCCCEEEEEeCC----------CcEEEEECCCCCCCCCCCCCccceEEecc-CCCeeEEEEcCCCCCEEEEEeCCCcEE
Q 010748 362 PHAEHSFVVSLED----------GTIKGFDIRTAKSDPDSTSQQSSFTLHAH-DKAVCTISYNPLVPNLLATGSTDKMVK 430 (502)
Q Consensus 362 ~~~~~~~~~~~~d----------g~v~i~d~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~sp~~~~~l~t~s~dg~i~ 430 (502)
|++. +++++..+ +.|.++|..+. .....+... ......++|+|++ +.|+++.. .|.
T Consensus 181 ~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~---------~v~~~~~~~~g~~p~~la~~~d~-~~lyv~~~--~v~ 247 (328)
T 3dsm_A 181 KYNK-MWTITDGGYEGSPYGYEAPSLYRIDAETF---------TVEKQFKFKLGDWPSEVQLNGTR-DTLYWINN--DIW 247 (328)
T ss_dssp TTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTT---------EEEEEEECCTTCCCEEEEECTTS-CEEEEESS--SEE
T ss_pred CCCC-EEEEECCCccCCccccCCceEEEEECCCC---------eEEEEEecCCCCCceeEEEecCC-CEEEEEcc--EEE
Confidence 9765 55555443 78999999876 444444432 2368999999988 66666554 899
Q ss_pred EEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEE----eCCCcEEEEECCCCcccccc
Q 010748 431 LWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG----GSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 431 vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg----~~dg~i~vwd~~~~~~~~~~ 488 (502)
+||+.+++................++++|++..++++. ..++.|.+||.. ++.+.+.
T Consensus 248 ~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i 308 (328)
T 3dsm_A 248 RMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEF 308 (328)
T ss_dssp EEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEE
T ss_pred EEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEE
Confidence 99998876321111122245688999999666577776 678899999998 7766543
No 189
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.55 E-value=1.1e-12 Score=125.95 Aligned_cols=236 Identities=8% Similarity=0.029 Sum_probs=158.8
Q ss_pred CCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEE
Q 010748 205 DREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 284 (502)
Q Consensus 205 ~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~s 284 (502)
|++++..++..+.++.++.|.-. ....+..+...+.+++|++++ .++++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~g-~l~~~ 61 (333)
T 2dg1_A 13 YSGKSNSAVPIISESELQTITAE------------------------------PWLEISKKGLQLEGLNFDRQG-QLFLL 61 (333)
T ss_dssp SCGGGGCSSCCCCGGGSCEEECE------------------------------EEEEEESSCCCEEEEEECTTS-CEEEE
T ss_pred ecCCccceeEEeecccCcccccc------------------------------eeEEEeccCccccCcEECCCC-CEEEE
Confidence 36777777777778888888321 011122455667899999984 57778
Q ss_pred EecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCC----CcEEEEecCCCCCccceE--eecCCeeEE
Q 010748 285 ASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD----RSVVMKDARISTHSGFKW--AVAADVESL 358 (502)
Q Consensus 285 gs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~d----g~i~iwd~~~~~~~~~~~--~~~~~v~~v 358 (502)
+..++.|.+||..+++.......+...+.+++|++++ +++++...+ +.|.+||..+........ .....+..+
T Consensus 62 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i 140 (333)
T 2dg1_A 62 DVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDM 140 (333)
T ss_dssp ETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTS-CEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEE
T ss_pred ECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCC-cEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccce
Confidence 8889999999998887665544566789999999998 777776666 689999988766432111 123568899
Q ss_pred EeCCCCCCEEEEEeC------CCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEE
Q 010748 359 AWDPHAEHSFVVSLE------DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 432 (502)
Q Consensus 359 ~~~~~~~~~~~~~~~------dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vw 432 (502)
+++|++. ++++... .+.|..|+..+. .+..+..+...+..++|+|++..++++.+.++.|.+|
T Consensus 141 ~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~~----------~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~ 209 (333)
T 2dg1_A 141 VFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFR----------TVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRI 209 (333)
T ss_dssp EECTTSC-EEEEECCCBTTBCCEEEEEECTTSC----------CEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEE
T ss_pred EECCCCC-EEEEeccccccCCCceEEEEeCCCC----------EEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEE
Confidence 9999864 5554432 355666665543 1222323344578999999983355555668899999
Q ss_pred ECCC-CCeeE------EEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccc
Q 010748 433 DLSN-NQPSC------IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 433 d~~~-~~~~~------~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~ 486 (502)
++.. +.... ......+ ..+..+++++++. ++++...++.|.+|+. .++.+.
T Consensus 210 d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~-l~v~~~~~~~v~~~d~-~g~~~~ 267 (333)
T 2dg1_A 210 ALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDN-LYVAMYGQGRVLVFNK-RGYPIG 267 (333)
T ss_dssp EECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCC-EEEEEETTTEEEEECT-TSCEEE
T ss_pred EecCCCcCcccccceEEEecCCC-CCCCceEECCCCC-EEEEEcCCCEEEEECC-CCCEEE
Confidence 9964 22111 1112222 4688899999998 5776667789999998 444443
No 190
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.54 E-value=1.3e-12 Score=121.35 Aligned_cols=241 Identities=9% Similarity=0.026 Sum_probs=158.1
Q ss_pred ccccccccCCCceEE-EEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCC
Q 010748 141 DLEDMTINPNDAVIV-CARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEP 219 (502)
Q Consensus 141 ~v~~~~~~p~~~~l~-~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~dg 219 (502)
...++.+.|++++++ +....+ .|+.++.... ...... ..-...|.++++ +++|+++++.. ++
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~-----~i~~~~~~~~---~~~~~~-~~~~~~p~~i~~-------~~~g~l~v~~~-~~ 87 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYG-----RVVKLATGST---GTTVLP-FNGLYQPQGLAV-------DGAGTVYVTDF-NN 87 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSC-----EEEEECC--------EECC-CCSCCSCCCEEE-------CTTCCEEEEET-TT
T ss_pred CccceEECCCCCEEEEccCCCC-----cEEEecCCCc---ccceEe-eCCcCCcceeEE-------CCCCCEEEEcC-CC
Confidence 557789999999777 434444 6666765432 111100 011123455555 67888766666 88
Q ss_pred cEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeCCCC
Q 010748 220 AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG 299 (502)
Q Consensus 220 ~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~ 299 (502)
.|.+|+....... .........+.+|++.+++ +++++...++.|.+|+..+.
T Consensus 88 ~i~~~d~~~~~~~---------------------------~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~ 139 (270)
T 1rwi_B 88 RVVTLAAGSNNQT---------------------------VLPFDGLNYPEGLAVDTQG-AVYVADRGNNRVVKLAAGSK 139 (270)
T ss_dssp EEEEECTTCSCCE---------------------------ECCCCSCSSEEEEEECTTC-CEEEEEGGGTEEEEECTTCC
T ss_pred EEEEEeCCCceEe---------------------------eeecCCcCCCcceEECCCC-CEEEEECCCCEEEEEECCCc
Confidence 9999997642110 0001223568899999984 57777777889999987655
Q ss_pred eeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEE
Q 010748 300 KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKG 379 (502)
Q Consensus 300 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i 379 (502)
............+.++++++++ +++++...++.|.+|+................+..+++++++ .++++...++.|.+
T Consensus 140 ~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~ 217 (270)
T 1rwi_B 140 TQTVLPFTGLNDPDGVAVDNSG-NVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVK 217 (270)
T ss_dssp SCEECCCCSCCSCCCEEECTTC-CEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTC-CEEEEETTTSCEEE
T ss_pred eeEeeccccCCCceeEEEeCCC-CEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCC-CEEEEECCCCcEEE
Confidence 4433333334567899999988 777777778899999987654332222222568899999987 56777777889999
Q ss_pred EECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCC
Q 010748 380 FDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 438 (502)
Q Consensus 380 ~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~ 438 (502)
|+.... ........+...+.++++++++ +++++...++.|++|++...+
T Consensus 218 ~~~~~~---------~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 218 LLAGST---------TSTVLPFTGLNTPLAVAVDSDR-TVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp ECTTCS---------CCEECCCCSCSCEEEEEECTTC-CEEEEEGGGTEEEEECCCGGG
T ss_pred EcCCCC---------cceeeccCCCCCceeEEECCCC-CEEEEECCCCEEEEEcCCCcc
Confidence 998654 1111112233568999999998 788888899999999987654
No 191
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.53 E-value=2.9e-12 Score=136.98 Aligned_cols=288 Identities=8% Similarity=0.015 Sum_probs=172.6
Q ss_pred cCCCceEEEEEecCCcceeEEEEEecC---CCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCC-----C
Q 010748 148 NPNDAVIVCARNEDDVSHLEVYILEES---DGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSME-----P 219 (502)
Q Consensus 148 ~p~~~~l~~~~~~~~~~~l~v~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~d-----g 219 (502)
+|+|++++....++....-.+|..+.. ... .............. .|....+.|||||++||.++.+ .
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~lld~~~l~~~~----~~~~~~~~~SPDG~~la~~~~~~G~e~~ 189 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTK-GRVLLDPNTWAKDG----ATALDAWAASDDGRLLAYSVQDGGSDWR 189 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCC-CEEEECGGGCC--------EEEEEEEECTTSSEEEEEEEETTCSEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCC-CEEEECHHHhccCC----CEEEEeEEECCCCCEEEEEEcCCCCceE
Confidence 499999998887765445678888754 221 11111110000000 0111123348999999987654 4
Q ss_pred cEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCc---------
Q 010748 220 AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQ--------- 290 (502)
Q Consensus 220 ~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~--------- 290 (502)
.|++||+.+++.+.. ..+...+..++|+|+ . .|+.++.++.
T Consensus 190 ~i~v~dl~tg~~~~~----------------------------~~~~~~~~~~~wspD-~-~l~~~~~~~~~~~~~~~~~ 239 (741)
T 1yr2_A 190 TVKFVGVADGKPLAD----------------------------ELKWVKFSGLAWLGN-D-ALLYSRFAEPKEGQAFQAL 239 (741)
T ss_dssp EEEEEETTTCCEEEE----------------------------EEEEEESCCCEESTT-S-EEEEEECCCC--------C
T ss_pred EEEEEECCCCCCCCc----------------------------cCCCceeccEEEECC-C-EEEEEEecCcccccccccC
Confidence 699999987543210 011222468899999 6 5555555543
Q ss_pred -----EEEEeCCCCe----eeEeeccCCCCeEEEEEcCCCCcEEEEEeCC-----CcEEEEecCCC--CCccceEeecCC
Q 010748 291 -----VKIWDVAAGK----CNLTLEHHTDKVQAVAWNHHSPQILLSGSFD-----RSVVMKDARIS--THSGFKWAVAAD 354 (502)
Q Consensus 291 -----v~vwd~~~~~----~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~d-----g~i~iwd~~~~--~~~~~~~~~~~~ 354 (502)
|++|++.++. .+.....+...+.++.|+|+| ++|+..+.+ ..|.+||+.++ ............
T Consensus 240 ~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 318 (741)
T 1yr2_A 240 NYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDG-RWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA 318 (741)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTS-CEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS
T ss_pred CCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCC-CEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc
Confidence 8999998765 222223344468899999999 666665543 38999999876 312223333334
Q ss_pred eeEEEeCCCCCCEEEEEeC---CCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEE
Q 010748 355 VESLAWDPHAEHSFVVSLE---DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKL 431 (502)
Q Consensus 355 v~~v~~~~~~~~~~~~~~~---dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~v 431 (502)
+....+ |++..+++.+.. ++.|.+|++.+.. ......+..+...+..++++ +..++++...++..+|
T Consensus 319 ~~~~~~-~dg~~l~~~s~~~~~~~~l~~~d~~~~~-------~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l 388 (741)
T 1yr2_A 319 QWDFVD-GVGDQLWFVSGDGAPLKKIVRVDLSGST-------PRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQV 388 (741)
T ss_dssp CEEEEE-EETTEEEEEECTTCTTCEEEEEECSSSS-------CEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEE
T ss_pred eEEEEe-ccCCEEEEEECCCCCCCEEEEEeCCCCc-------cccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEE
Confidence 444433 777644444432 4459999987631 01222334444556677777 3378888888998777
Q ss_pred EECC-CCCeeEEEEecC-CCCcEEEEEEcCCCCcEEEEEeC---CCcEEEEECCCCc
Q 010748 432 WDLS-NNQPSCIASRNP-KAGAVFSVAFSEDSPFVLAIGGS---KGKLEIWDTLSDA 483 (502)
Q Consensus 432 wd~~-~~~~~~~~~~~~-~~~~v~~~~~spd~~~ll~sg~~---dg~i~vwd~~~~~ 483 (502)
|.+. .+. ....+.. ..+.+..+.++|++..++++.++ .++|++||+.+++
T Consensus 389 ~~~~~~g~--~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 389 LAFDLDGK--PAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEEETTSC--EEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred EEEeCCCC--ceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 7554 233 2333433 35778999999998865554443 3689999998876
No 192
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.53 E-value=4.3e-12 Score=118.38 Aligned_cols=211 Identities=12% Similarity=0.030 Sum_probs=154.2
Q ss_pred CCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcc-cceeeEEeccCCCcEEEEEe
Q 010748 208 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHT-DSVLGLAWNKEFRNILASAS 286 (502)
Q Consensus 208 ~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~V~~l~~~~~~~~~l~sgs 286 (502)
.+++|++++.++.|.+||..+++.+.. +..+. ..+.++.+.|+ +++|+ +
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~---------------------------~~~~~~~~~~~~~~~pd-G~ilv--s 53 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWE---------------------------YPLEKGWECNSVAATKA-GEILF--S 53 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEE---------------------------EECCTTCCCCEEEECTT-SCEEE--E
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEE---------------------------eCCCccCCCcCeEECCC-CCEEE--e
Confidence 478999999999999999876544332 22232 46788999999 45777 4
Q ss_pred cCCcEEEEeCCCCeeeEeeccC-CCCeEEEEEcCCCCcEEEEEeC-CCcEEEEecCCCCCccceEee-------cCCeeE
Q 010748 287 ADKQVKIWDVAAGKCNLTLEHH-TDKVQAVAWNHHSPQILLSGSF-DRSVVMKDARISTHSGFKWAV-------AADVES 357 (502)
Q Consensus 287 ~dg~v~vwd~~~~~~~~~~~~h-~~~v~~l~~~~~~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~-------~~~v~~ 357 (502)
.++.|..||. +++.+..+..+ ...+.++.+.+++ +++++.+. ++.|..++.. ++... .+.. ......
T Consensus 54 ~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG-~~lv~~~~~~~~v~~vd~~-Gk~l~-~~~~~~~~~~~~~~~~~ 129 (276)
T 3no2_A 54 YSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDG-NALVAWCGHPSTILEVNMK-GEVLS-KTEFETGIERPHAQFRQ 129 (276)
T ss_dssp CBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTS-CEEEEEESTTEEEEEECTT-SCEEE-EEEECCSCSSGGGSCSC
T ss_pred CCCCEEEECC-CCCEEEEEcCCCCccccccEECCCC-CEEEEecCCCCEEEEEeCC-CCEEE-EEeccCCCCcccccccC
Confidence 5778999998 89999998764 3578899999999 88888777 7788877753 33221 1221 123445
Q ss_pred EEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCC
Q 010748 358 LAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNN 437 (502)
Q Consensus 358 v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~ 437 (502)
+++.+++. ++++...++.|..||.. + +.++++..+ ..+.++.+.+++ +++++++.++.|..+|..++
T Consensus 130 v~~~~~G~-~lv~~~~~~~v~~~d~~-G---------~~~w~~~~~-~~~~~~~~~~~g-~~~v~~~~~~~v~~~d~~tG 196 (276)
T 3no2_A 130 INKNKKGN-YLVPLFATSEVREIAPN-G---------QLLNSVKLS-GTPFSSAFLDNG-DCLVACGDAHCFVQLNLESN 196 (276)
T ss_dssp CEECTTSC-EEEEETTTTEEEEECTT-S---------CEEEEEECS-SCCCEEEECTTS-CEEEECBTTSEEEEECTTTC
T ss_pred ceECCCCC-EEEEecCCCEEEEECCC-C---------CEEEEEECC-CCccceeEcCCC-CEEEEeCCCCeEEEEeCcCC
Confidence 67788765 78888899999999987 5 677777765 345667788887 88888888889999999988
Q ss_pred CeeEEEEecCC------CCcEEEEEEcCCCCcEEEEE
Q 010748 438 QPSCIASRNPK------AGAVFSVAFSEDSPFVLAIG 468 (502)
Q Consensus 438 ~~~~~~~~~~~------~~~v~~~~~spd~~~ll~sg 468 (502)
+. +..+..+ ...+..++..++|. ++++.
T Consensus 197 ~~--~w~~~~~~~~~~~l~~~~~~~~~~~G~-i~v~~ 230 (276)
T 3no2_A 197 RI--VRRVNANDIEGVQLFFVAQLFPLQNGG-LYICN 230 (276)
T ss_dssp CE--EEEEEGGGSBSCCCSEEEEEEECTTSC-EEEEE
T ss_pred cE--EEEecCCCCCCccccccccceEcCCCC-EEEEe
Confidence 84 4444321 23478899999998 46655
No 193
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.51 E-value=4.8e-11 Score=116.20 Aligned_cols=292 Identities=12% Similarity=0.045 Sum_probs=176.4
Q ss_pred cccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec---------
Q 010748 146 TINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS--------- 216 (502)
Q Consensus 146 ~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~--------- 216 (502)
...|+++.+.++...+....+.|++|+.... .+. ..+.....| .+. ++|+|++|+++.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~---~~~--~~i~~g~~p-~i~-------~spDg~~lyv~n~~~~~~~rg 93 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSG---SIL--GHVNGGFLP-NPV-------AAHSGSEFALASTSFSRIAKG 93 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCC---eEE--EEecCCCCC-CeE-------ECCCCCEEEEEeccccccccC
Confidence 3447777777665311111116777776554 322 223333333 333 389999999886
Q ss_pred -CCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEec--CCcEEE
Q 010748 217 -MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA--DKQVKI 293 (502)
Q Consensus 217 -~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~--dg~v~v 293 (502)
.++.|.+||..+........+.+. . .. .+......++|+|+++ +|+.++. ++.|.+
T Consensus 94 ~~~~~v~viD~~t~~~~~~i~~~~~---------------~----~~-~~g~~p~~~~~spDG~-~l~v~n~~~~~~v~v 152 (373)
T 2mad_H 94 KRTDYVEVFDPVTFLPIADIELPDA---------------P----RF-DVGPYSWMNANTPNNA-DLLFFQFAAGPAVGL 152 (373)
T ss_pred CCCCeEEEEECCCCcEEEEEECCCc---------------c----cc-ccCCCccceEECCCCC-EEEEEecCCCCeEEE
Confidence 367899999976543332211100 0 00 0112345889999955 6666653 578999
Q ss_pred EeCCCCeeeEe-eccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceE-----eecCC-eeEEEeCCCCCC
Q 010748 294 WDVAAGKCNLT-LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-----AVAAD-VESLAWDPHAEH 366 (502)
Q Consensus 294 wd~~~~~~~~~-~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-----~~~~~-v~~v~~~~~~~~ 366 (502)
+| .+++.+.. +.. .. |+.+.|.+.+.+++.+.||.+.+++. +++...... ....+ .....+.+++..
T Consensus 153 iD-~t~~~~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 226 (373)
T 2mad_H 153 VV-QGGSSDDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGR 226 (373)
T ss_pred EE-CCCCEEeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCE
Confidence 99 99998877 642 22 24566777677888889999999999 655442111 11111 123445565554
Q ss_pred EEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEec----------cCCCeeEEEEcCCCCCEEEEEe---------CCC
Q 010748 367 SFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA----------HDKAVCTISYNPLVPNLLATGS---------TDK 427 (502)
Q Consensus 367 ~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~----------h~~~v~~l~~sp~~~~~l~t~s---------~dg 427 (502)
++++. ..+.+.+.|+..... ..+..+.. .......+.++|++..++++.. ..+
T Consensus 227 ~~~~~-~~~~v~vid~~~~~~-------~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~ 298 (373)
T 2mad_H 227 IVWPV-YSGKILQADISAAGA-------TNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAK 298 (373)
T ss_pred EEEEc-CCceEEEEeccCCcc-------eEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCC
Confidence 44444 678999999875421 11111111 1233445788998844444332 135
Q ss_pred cEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEe-CCCcEEEEECCCCcccccc
Q 010748 428 MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGG-SKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 428 ~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~-~dg~i~vwd~~~~~~~~~~ 488 (502)
.|.++|+.+.+. +..+. ..+...+++|+||++++|+++. .++.|.|||+.+++.+.+.
T Consensus 299 ~V~VID~~t~~v--v~~i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 299 EVTSVTGLVGQT--SSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred eEEEEECCCCEE--EEEEE-CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 799999998874 33433 2235889999999985566666 5899999999999988773
No 194
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.50 E-value=5.5e-11 Score=111.83 Aligned_cols=277 Identities=10% Similarity=0.064 Sum_probs=178.3
Q ss_pred cccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCC
Q 010748 140 EDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEP 219 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~dg 219 (502)
....++.+.+++++.++....+ .|+.++.. . .+...........|.++.+ .++|+++++...++
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~~~-----~v~~~~~~-~---~~~~~~~~~~~~~~~~i~~-------~~~g~l~v~~~~~~ 83 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHKAN-----KISSLDQS-G---RIKEFEVPTPDAKVMCLIV-------SSLGDIWFTENGAN 83 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTT-----EEEEECTT-S---CEEEEECSSTTCCEEEEEE-------CTTSCEEEEETTTT
T ss_pred CCcceeeECCCCCEEEEcCCCC-----eEEEECCC-C---ceEEEECCCCCCcceeEEE-------CCCCCEEEEecCCC
Confidence 4667899999999888765555 67777655 3 2222110001133455544 67888888777778
Q ss_pred cEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeCCCC
Q 010748 220 AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG 299 (502)
Q Consensus 220 ~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~ 299 (502)
.|.+|+.. +.. .. .........+.++++.++ +.++++...++.|..|+.. +
T Consensus 84 ~v~~~d~~-g~~-~~-------------------------~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~~-g 134 (300)
T 2qc5_A 84 KIGKLSKK-GGF-TE-------------------------YPLPQPDSGPYGITEGLN-GDIWFTQLNGDRIGKLTAD-G 134 (300)
T ss_dssp EEEEECTT-SCE-EE-------------------------EECSSTTCCEEEEEECST-TCEEEEETTTTEEEEECTT-S
T ss_pred eEEEECCC-CCe-EE-------------------------ecCCCCCCCCccceECCC-CCEEEEccCCCeEEEECCC-C
Confidence 89999876 221 10 011112356889999988 4566666667899999987 6
Q ss_pred eeeE-eeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceE-eecCCeeEEEeCCCCCCEEEEEeCCCcE
Q 010748 300 KCNL-TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-AVAADVESLAWDPHAEHSFVVSLEDGTI 377 (502)
Q Consensus 300 ~~~~-~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~v~~v~~~~~~~~~~~~~~~dg~v 377 (502)
+... .+......+.++++.+++ +++++...++.|..|+. .+....... .....+..+++++++ .++++....+.|
T Consensus 135 ~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i 211 (300)
T 2qc5_A 135 TIYEYDLPNKGSYPAFITLGSDN-ALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDG-ALWFVEIMGNKI 211 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEE
T ss_pred CEEEccCCCCCCCceeEEECCCC-CEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCC-CEEEEccCCCEE
Confidence 5442 233345678999999998 66666666789999998 433222111 123458899999976 456655567789
Q ss_pred EEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCcEEEEEE
Q 010748 378 KGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAF 457 (502)
Q Consensus 378 ~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~ 457 (502)
.+|+. ++ ......+..+...+.++++.+++ ++.++...++.|..|+. +++. ...........+.++++
T Consensus 212 ~~~~~-~g--------~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~-~g~~-~~~~~~~~~~~~~~i~~ 279 (300)
T 2qc5_A 212 GRITT-TG--------EISEYDIPTPNARPHAITAGKNS-EIWFTEWGANQIGRITN-DNTI-QEYQLQTENAEPHGITF 279 (300)
T ss_dssp EEECT-TC--------CEEEEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEECT-TSCE-EEEECCSTTCCCCCEEE
T ss_pred EEEcC-CC--------cEEEEECCCCCCCceEEEECCCC-CEEEeccCCCeEEEECC-CCcE-EEEECCccCCccceeEe
Confidence 99998 33 12222233345678999999987 66666666789999998 4442 23333334456889999
Q ss_pred cCCCCcEEEEEeCCCcEEEEEC
Q 010748 458 SEDSPFVLAIGGSKGKLEIWDT 479 (502)
Q Consensus 458 spd~~~ll~sg~~dg~i~vwd~ 479 (502)
.++|. ++++ +.. .|..++.
T Consensus 280 ~~~g~-l~v~-~~~-~i~~~~p 298 (300)
T 2qc5_A 280 GKDGS-VWFA-LKC-KIGKLNL 298 (300)
T ss_dssp CTTSC-EEEE-CSS-EEEEEEE
T ss_pred CCCCC-EEEE-ccC-ceEEeCC
Confidence 99997 4554 444 6777765
No 195
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.49 E-value=2.9e-12 Score=123.69 Aligned_cols=228 Identities=12% Similarity=0.160 Sum_probs=144.3
Q ss_pred cccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCC-
Q 010748 140 EDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSME- 218 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~d- 218 (502)
..+..+.|+|+|+.|+.++..++.....||+++...+....+..++ . ..++.| +|+|+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-----~-~~~~~w-------spdg~~l~~~~~~~ 125 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-----N-IRSLEW-------NEDSRKLLIVGFKR 125 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-----E-EEEEEE-------CTTSSEEEEEEECC
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-----C-ccceeE-------CCCCCEEEEEEccC
Confidence 3567899999999999887654223557888886554211222222 1 345666 8999999888642
Q ss_pred --------------------------CcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeE
Q 010748 219 --------------------------PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL 272 (502)
Q Consensus 219 --------------------------g~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 272 (502)
..|.+|++.++.... .+.. . .+..+
T Consensus 126 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~---------------------------~l~~-~-~~~~~ 176 (347)
T 2gop_A 126 REDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIE---------------------------EFEK-P-RFSSG 176 (347)
T ss_dssp CC---------CCCC---------CEEEEEEEETTTTEEEE---------------------------EEEE-E-TTCEE
T ss_pred CCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEe---------------------------eecC-C-Ccccc
Confidence 468888886432100 1111 2 67889
Q ss_pred EeccCCCcEEEEEecCC-------cEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCC--------CcEEEE
Q 010748 273 AWNKEFRNILASASADK-------QVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD--------RSVVMK 337 (502)
Q Consensus 273 ~~~~~~~~~l~sgs~dg-------~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~d--------g~i~iw 337 (502)
+|+|++ ++++++.++ ...||.+.+++. ..+..+ ..+.++ +|+| +.|+.++.+ ..|.+|
T Consensus 177 ~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~-~~~~~~--spdg-~~l~~~~~~~~~~~~~~~~l~~~ 249 (347)
T 2gop_A 177 IWHRDK--IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK-VSFYAV--DSDG-ERILLYGKPEKKYMSEHNKLYIY 249 (347)
T ss_dssp EEETTE--EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE-ESEEEE--EECS-SCEEEEECCSSSCCCSSCEEEEE
T ss_pred cCCCCe--EEEEEecccccccccccccEEEeCCCce-EEeccC-cceeeE--CCCC-CEEEEEEccccCCccccceEEEE
Confidence 999994 777776542 344444445554 334334 455544 8999 566655543 368888
Q ss_pred ecCCCCCccceEeecCCeeE-EEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCC
Q 010748 338 DARISTHSGFKWAVAADVES-LAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLV 416 (502)
Q Consensus 338 d~~~~~~~~~~~~~~~~v~~-v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~ 416 (502)
| ++........+...+.. +.|+ ++ ++++++.++.+++| +.++ .. ..+..+...|.+++|+|
T Consensus 250 d--~~~~~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~~~~~l~-~~~g---------~~-~~~~~~~~~v~~~~~s~-- 311 (347)
T 2gop_A 250 D--GKEVMGILDEVDRGVGQAKIKD-GK--VYFTLFEEGSVNLY-IWDG---------EI-KPIAKGRHWIMGFDVDE-- 311 (347)
T ss_dssp C--SSCEEESSTTCCSEEEEEEEET-TE--EEEEEEETTEEEEE-EESS---------SE-EEEECSSSEEEEEEESS--
T ss_pred C--CCceEeccccCCcccCCccEEc-Cc--EEEEEecCCcEEEE-EcCC---------ce-EEEecCCCeEEeeeeeC--
Confidence 8 33322222233456775 8998 65 88888999999999 8732 33 34445677899999998
Q ss_pred CCEEEEEeCCCcE-EEEECC
Q 010748 417 PNLLATGSTDKMV-KLWDLS 435 (502)
Q Consensus 417 ~~~l~t~s~dg~i-~vwd~~ 435 (502)
.++++++.++.. .||.+.
T Consensus 312 -~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 312 -IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp -SEEEEEECSSSCCEEEEES
T ss_pred -cEEEEEcCCCChHHheEeC
Confidence 477777776654 777765
No 196
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.49 E-value=1.7e-11 Score=118.06 Aligned_cols=295 Identities=12% Similarity=0.082 Sum_probs=180.9
Q ss_pred ccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec--------
Q 010748 145 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS-------- 216 (502)
Q Consensus 145 ~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~-------- 216 (502)
....|+++.+.++........-.|++++.... .+ -..+.....|- +.. +|+|++|++++
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~---~v--~~~I~vG~~P~-va~-------spDG~~lyVan~~~~r~~~ 104 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAG---RV--IGMIDGGFLPN-PVV-------ADDGSFIAHASTVFSRIAR 104 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTT---EE--EEEEEECSSCE-EEE-------CTTSSCEEEEEEEEEETTE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCC---eE--EEEEECCCCCc-EEE-------CCCCCEEEEEccccccccc
Confidence 45579999888887531000127888887654 22 23334444442 443 89999988875
Q ss_pred --CCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEec--CCcEE
Q 010748 217 --MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA--DKQVK 292 (502)
Q Consensus 217 --~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~--dg~v~ 292 (502)
.++.|.+||..+......+.+-++ + ..........++|+|+++ +|+.+.. ++.|.
T Consensus 105 G~~~~~VsviD~~t~~v~~~I~v~~g---------------~-----r~~~g~~P~~~a~spDGk-~lyVan~~~~~~Vs 163 (386)
T 3sjl_D 105 GERTDYVEVFDPVTLLPTADIELPDA---------------P-----RFLVGTYPWMTSLTPDGK-TLLFYQFSPAPAVG 163 (386)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEETTC---------------C-----CCCBSCCGGGEEECTTSS-EEEEEECSSSCEEE
T ss_pred CCCCCEEEEEECCCCeEEEEEECCCc---------------c-----ccccCCCCceEEEcCCCC-EEEEEEcCCCCeEE
Confidence 357899999987554433222110 0 000122456789999965 5555543 68999
Q ss_pred EEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCC-CCCccceEee----cCCe-eEEEeC-CCCC
Q 010748 293 IWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI-STHSGFKWAV----AADV-ESLAWD-PHAE 365 (502)
Q Consensus 293 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~----~~~v-~~v~~~-~~~~ 365 (502)
++|+.+++.+.++... + |....|.+.+.+++.+.||.+.+.++.. ++........ ...+ ....|. +++
T Consensus 164 VID~~t~~vv~tI~v~-g---~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG- 238 (386)
T 3sjl_D 164 VVDLEGKAFKRMLDVP-D---CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG- 238 (386)
T ss_dssp EEETTTTEEEEEEECC-S---EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT-
T ss_pred EEECCCCcEEEEEECC-C---cceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCC-
Confidence 9999999999988532 2 1223355557788889999999999876 3332111011 1111 123554 444
Q ss_pred CEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEe----------ccCCCeeEEEEcCCCCCEEEEEeC---------C
Q 010748 366 HSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH----------AHDKAVCTISYNPLVPNLLATGST---------D 426 (502)
Q Consensus 366 ~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~----------~h~~~v~~l~~sp~~~~~l~t~s~---------d 426 (502)
.++..+.+|.|+++|+..... .....+. ........+++++.+..++++-.. .
T Consensus 239 -~~~~vs~~g~V~v~d~~~~~~-------~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~ 310 (386)
T 3sjl_D 239 -RLVWPTYTGKIHQIDLSSGDA-------KFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTAS 310 (386)
T ss_dssp -EEEEEBTTSEEEEEECTTSSC-------EECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCE
T ss_pred -cEEEEeCCCEEEEEECCCCcc-------eeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCC
Confidence 344455689999999976521 1111111 112344567788987444444321 2
Q ss_pred CcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCC-cEEEEEeCCCcEEEEECCCCccccccc
Q 010748 427 KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSP-FVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 427 g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~-~ll~sg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
+.|.++|+.+.+........ ..+.+|++++|++ .++++...++.|.|+|..+++.+++.-
T Consensus 311 ~~V~viD~~t~kv~~~i~vg---~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~ 371 (386)
T 3sjl_D 311 RFVVVLDAKTGERLAKFEMG---HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVN 371 (386)
T ss_dssp EEEEEEETTTCCEEEEEEEE---EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred CEEEEEECCCCeEEEEEECC---CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEec
Confidence 56999999999853333332 3688999999996 444445568999999999999887654
No 197
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.49 E-value=8.6e-12 Score=117.64 Aligned_cols=204 Identities=7% Similarity=0.034 Sum_probs=144.9
Q ss_pred CcccceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCC
Q 010748 264 SHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST 343 (502)
Q Consensus 264 ~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~ 343 (502)
.+.....+++|+|++..+++++..++.|.+|+..++ ...+..+...+.++++++++ +++++...++.|.+||..+++
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg-~l~v~~~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQG-HLIACSHGLRRLERQREPGGE 101 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTC-CEEEEETTTTEEEEECSTTCC
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCC-cEEEEecCCCeEEEEcCCCCc
Confidence 455678899999995558889999999999999877 56666677889999999998 777776667899999997766
Q ss_pred CccceEee----cCCeeEEEeCCCCCCEEEE----Ee-------------CCCcEEEEECCCCCCCCCCCCCccceEEec
Q 010748 344 HSGFKWAV----AADVESLAWDPHAEHSFVV----SL-------------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHA 402 (502)
Q Consensus 344 ~~~~~~~~----~~~v~~v~~~~~~~~~~~~----~~-------------~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~ 402 (502)
........ ...+..++++|++. ++++ |+ ..+.|..++.. + .+..+..
T Consensus 102 ~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g----------~~~~~~~ 169 (296)
T 3e5z_A 102 WESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G----------TLSAPIR 169 (296)
T ss_dssp EEEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S----------CEEEEEC
T ss_pred EEEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC-C----------CEEEeec
Confidence 43321111 23467799999875 5555 22 13456666554 2 2333455
Q ss_pred cCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECC-CCCe-eEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECC
Q 010748 403 HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLS-NNQP-SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTL 480 (502)
Q Consensus 403 h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~-~~~~-~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~ 480 (502)
+......++|+|++ ++|++.+.++.|++|++. ++.. .....+..+.+.+.+++++++|. ++++. ++.|.+|+..
T Consensus 170 ~~~~~~gi~~s~dg-~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 170 DRVKPNGLAFLPSG-NLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA--GDGVHVLTPD 245 (296)
T ss_dssp CCSSEEEEEECTTS-CEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE--TTEEEEECTT
T ss_pred CCCCCccEEECCCC-CEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc--CCeEEEECCC
Confidence 66678999999998 666888888999999997 4443 11222233556677899999998 45544 7889999986
Q ss_pred CCccccc
Q 010748 481 SDAGISN 487 (502)
Q Consensus 481 ~~~~~~~ 487 (502)
++.+..
T Consensus 246 -g~~~~~ 251 (296)
T 3e5z_A 246 -GDELGR 251 (296)
T ss_dssp -SCEEEE
T ss_pred -CCEEEE
Confidence 554443
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.47 E-value=7.7e-11 Score=110.75 Aligned_cols=229 Identities=7% Similarity=0.026 Sum_probs=157.6
Q ss_pred CCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEE
Q 010748 206 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASA 285 (502)
Q Consensus 206 s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sg 285 (502)
+++|+++++...++.|.+|+.. .. .... ....+...+.++++.++ +.++++.
T Consensus 23 d~~g~l~v~~~~~~~v~~~d~~-~~-~~~~-------------------------~~~~~~~~~~~i~~~~~-g~l~v~~ 74 (299)
T 2z2n_A 23 SDKGKVWITQHKANMISCINLD-GK-ITEY-------------------------PLPTPDAKVMCLTISSD-GEVWFTE 74 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECTT-CC-EEEE-------------------------ECSSTTCCEEEEEECTT-SCEEEEE
T ss_pred CCCCCEEEEecCCCcEEEEcCC-CC-eEEe-------------------------cCCcccCceeeEEECCC-CCEEEeC
Confidence 6789888877767899999976 21 1100 01123467889999998 4567666
Q ss_pred ecCCcEEEEeCCCCee-eEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceE-eecCCeeEEEeCCC
Q 010748 286 SADKQVKIWDVAAGKC-NLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-AVAADVESLAWDPH 363 (502)
Q Consensus 286 s~dg~v~vwd~~~~~~-~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~v~~v~~~~~ 363 (502)
..++.|..|+.. ++. ...+......+.++++.+++ .++++...++.|.+||. ++....... .....+..++++++
T Consensus 75 ~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~ 151 (299)
T 2z2n_A 75 NAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNG-DIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSD 151 (299)
T ss_dssp TTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT
T ss_pred CCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCC-CEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCC
Confidence 667899999986 432 22222345678999999988 77777777889999998 433222111 12346889999997
Q ss_pred CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEE
Q 010748 364 AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 443 (502)
Q Consensus 364 ~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~ 443 (502)
+. ++++....+.|..||. ++. ........+...+.++++++++ .+.++....+.|.+|+. +++.. ..
T Consensus 152 g~-l~v~~~~~~~i~~~~~-~g~--------~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~-~g~~~-~~ 218 (299)
T 2z2n_A 152 NA-LWFTENQNNAIGRITE-SGD--------ITEFKIPTPASGPVGITKGNDD-ALWFVEIIGNKIGRITT-SGEIT-EF 218 (299)
T ss_dssp SC-EEEEETTTTEEEEECT-TCC--------EEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECT-TCCEE-EE
T ss_pred CC-EEEEeCCCCEEEEEcC-CCc--------EEEeeCCCCCCcceeEEECCCC-CEEEEccCCceEEEECC-CCcEE-EE
Confidence 64 6666666789999998 441 1112233345568899999987 77777666889999999 66532 23
Q ss_pred EecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEEC
Q 010748 444 SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 479 (502)
Q Consensus 444 ~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~ 479 (502)
....+...+.++++++++. ++++...++.|.+|+.
T Consensus 219 ~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 219 KIPTPNARPHAITAGAGID-LWFTEWGANKIGRLTS 253 (299)
T ss_dssp ECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEEET
T ss_pred ECCCCCCCceeEEECCCCC-EEEeccCCceEEEECC
Confidence 3344556799999999998 5666556789999998
No 199
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.47 E-value=5.8e-12 Score=133.65 Aligned_cols=257 Identities=9% Similarity=-0.008 Sum_probs=161.8
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCc-ceeeeecCCCCCCCCCCEEEEe
Q 010748 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFP-LCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~la~g 215 (502)
.|...+..+.|||+|++||.+...+......||+++...+ .... ...++... ..+.| +|+|+.|+.+
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg---~~~~--~~~~~~~~~~~~~w-------spDg~~l~~~ 185 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSG---EWSK--VDVIEGGKYATPKW-------TPDSKGFYYE 185 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTC---CBCS--SCCBSCCTTCCCEE-------CTTSSEEEEE
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCC---CCcC--CcccCcccccceEE-------ecCCCEEEEE
Confidence 3455788999999999999776544221246666665554 2210 00111111 34455 8999999999
Q ss_pred cCCCc-------------EEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEE
Q 010748 216 SMEPA-------------IEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNIL 282 (502)
Q Consensus 216 ~~dg~-------------I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l 282 (502)
+.+.. |++|++.+..... ........|...+.++.|+|+++ +|
T Consensus 186 ~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~-----------------------~lv~~~~~~~~~~~~~~~SpDG~-~l 241 (695)
T 2bkl_A 186 WLPTDPSIKVDERPGYTTIRYHTLGTEPSKD-----------------------TVVHERTGDPTTFLQSDLSRDGK-YL 241 (695)
T ss_dssp ECCCCTTSCGGGGGGGCEEEEEETTSCGGGC-----------------------EEEECCCCCTTCEEEEEECTTSC-CE
T ss_pred EecCCCCCccccCCCCCEEEEEECCCCchhc-----------------------eEEEecCCCCEEEEEEEECCCCC-EE
Confidence 88776 9999997643211 11112234666789999999965 55
Q ss_pred EEEecCC----cEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEe---CCCcEEEEecCCCCCc--cceEee--
Q 010748 283 ASASADK----QVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGS---FDRSVVMKDARISTHS--GFKWAV-- 351 (502)
Q Consensus 283 ~sgs~dg----~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s---~dg~i~iwd~~~~~~~--~~~~~~-- 351 (502)
+.++.++ .|++|+..+++ ...+..+...+....| +++ .+++++. .++.|.+||+.++... .....+
T Consensus 242 ~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~-~~g-~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 318 (695)
T 2bkl_A 242 FVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHA-WKD-RFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDS 318 (695)
T ss_dssp EEEEEETTTEEEEEEECTTCSS-CEEEEECSSCCEEEEE-ETT-EEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCS
T ss_pred EEEEeCCCCceEEEEEcCCCCc-eEEeecCCCceEEEEe-cCC-cEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCC
Confidence 5555555 67777765554 3444445556666667 667 4555544 2588999999876531 222322
Q ss_pred cCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEecc-CCCeeEEEEcCCCCCEEEEEeC---CC
Q 010748 352 AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH-DKAVCTISYNPLVPNLLATGST---DK 427 (502)
Q Consensus 352 ~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~sp~~~~~l~t~s~---dg 427 (502)
...+..++|+ +..++++...++..++|.+... ......+..+ .+.+..++++|++..++++.+. .+
T Consensus 319 ~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~--------g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~ 388 (695)
T 2bkl_A 319 SASLLSVSIV--GGHLSLEYLKDATSEVRVATLK--------GKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPR 388 (695)
T ss_dssp SCEEEEEEEE--TTEEEEEEEETTEEEEEEEETT--------CCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEE
T ss_pred CCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCC--------CCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCC
Confidence 3347788887 3457888889998888866522 1334445544 6678888999987445544443 46
Q ss_pred cEEEEECCCCCeeEE
Q 010748 428 MVKLWDLSNNQPSCI 442 (502)
Q Consensus 428 ~i~vwd~~~~~~~~~ 442 (502)
.|++||+.+++...+
T Consensus 389 ~v~~~d~~~g~~~~l 403 (695)
T 2bkl_A 389 QIYKTSVSTGKSELW 403 (695)
T ss_dssp EEEEEETTTCCEEEE
T ss_pred EEEEEECCCCcEEEE
Confidence 799999988774333
No 200
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.43 E-value=4.1e-11 Score=118.34 Aligned_cols=230 Identities=8% Similarity=0.014 Sum_probs=154.1
Q ss_pred CCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEE
Q 010748 206 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASA 285 (502)
Q Consensus 206 s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sg 285 (502)
+++++++++...++.|++|++.+..... .... ..... ++|++++ ..|+++
T Consensus 139 d~~g~lyv~d~~~~~I~~id~~~g~~~~---------------------------~~~~-~~~~~-ia~~~~g-~~l~~~ 188 (409)
T 3hrp_A 139 VGNNTVLAYQRDDPRVRLISVDDNKVTT---------------------------VHPG-FKGGK-PAVTKDK-QRVYSI 188 (409)
T ss_dssp CSTTEEEEEETTTTEEEEEETTTTEEEE---------------------------EEET-CCBCB-CEECTTS-SEEEEE
T ss_pred eCCCCEEEEecCCCcEEEEECCCCEEEE---------------------------eecc-CCCCc-eeEecCC-CcEEEE
Confidence 7889988888888999999987432110 0011 12233 8999995 477777
Q ss_pred ecCC--cEEEEeCCCCeeeEee----ccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccc----eEeecCCe
Q 010748 286 SADK--QVKIWDVAAGKCNLTL----EHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF----KWAVAADV 355 (502)
Q Consensus 286 s~dg--~v~vwd~~~~~~~~~~----~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~----~~~~~~~v 355 (502)
..++ .|.+|+...+.....+ ......+.+++++|.+.. |+.+..++.|+.||..+...... ........
T Consensus 189 d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~-lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~ 267 (409)
T 3hrp_A 189 GWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEW-LYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTN 267 (409)
T ss_dssp BSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSE-EEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCS
T ss_pred ecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCe-EEEEECCCcEEEEECCCCCEEEEecccccCCCCCC
Confidence 7655 7999998766543344 224567789999995524 55577788999999987653221 11111111
Q ss_pred -e-EEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEecc---------------CCCeeEEEEcCCCCC
Q 010748 356 -E-SLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH---------------DKAVCTISYNPLVPN 418 (502)
Q Consensus 356 -~-~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h---------------~~~v~~l~~sp~~~~ 418 (502)
. .++|+|.+..++++...++.|+.|+.... +..+.++ -.....++++|++ .
T Consensus 268 P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-----------~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG-~ 335 (409)
T 3hrp_A 268 PGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-----------CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDG-N 335 (409)
T ss_dssp SCCEEEEETTTTEEEEEETTTTEEEEECTTCC-----------EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTC-C
T ss_pred ccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-----------EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCC-C
Confidence 3 89999976666777777889999987632 2222222 1347899999998 7
Q ss_pred EEEEEe-CCCcEEEEECCCCCeeEEEEecC------------CCCcEEEEEEcCCCCcEEEEEeCCCcEEEEEC
Q 010748 419 LLATGS-TDKMVKLWDLSNNQPSCIASRNP------------KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 479 (502)
Q Consensus 419 ~l~t~s-~dg~i~vwd~~~~~~~~~~~~~~------------~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~ 479 (502)
++++-+ .++.|+.|++.++....+..... .......+++++++. ++++-..+++|+.+.+
T Consensus 336 lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~-lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 336 FYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGG-YWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSE-EEEEESTTCEEEEEEE
T ss_pred EEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCC-EEEEECCCCeEEEEEe
Confidence 888877 88999999987776332222110 124588999999976 6777778888888775
No 201
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.43 E-value=2.1e-11 Score=116.92 Aligned_cols=199 Identities=8% Similarity=-0.037 Sum_probs=140.6
Q ss_pred cceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCcc
Q 010748 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG 346 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~ 346 (502)
.....+.+.. ..++++...++.|.+||..+++.+.++. .......+++++++ .++++...++.|.+||+.+.+...
T Consensus 44 ~~~~~i~~~~--~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~ 119 (328)
T 3dsm_A 44 DVAQSMVIRD--GIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITG 119 (328)
T ss_dssp SCEEEEEEET--TEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEE
T ss_pred ccceEEEEEC--CEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEE
Confidence 4456777753 4566677778999999999999988885 35678899998888 665555589999999998876543
Q ss_pred ceEeecC------CeeEEEeCCCCCCEEEEEe-CCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCE
Q 010748 347 FKWAVAA------DVESLAWDPHAEHSFVVSL-EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNL 419 (502)
Q Consensus 347 ~~~~~~~------~v~~v~~~~~~~~~~~~~~-~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~ 419 (502)
...... ....+++ .+..++++.. .++.|.+||+.+. ..+..+... .....++++|++ ++
T Consensus 120 -~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~---------~~~~~i~~g-~~p~~i~~~~dG-~l 185 (328)
T 3dsm_A 120 -YIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETD---------KVVDELTIG-IQPTSLVMDKYN-KM 185 (328)
T ss_dssp -EEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTT---------EEEEEEECS-SCBCCCEECTTS-EE
T ss_pred -EEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCC---------eEEEEEEcC-CCccceEEcCCC-CE
Confidence 233333 5667777 3443444444 4889999999886 445555433 345788999987 66
Q ss_pred EEEEeCC----------CcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccc
Q 010748 420 LATGSTD----------KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 487 (502)
Q Consensus 420 l~t~s~d----------g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~ 487 (502)
++++..+ +.|.+||..+++........ .......++|+|++.+ |.++.. .|.+||+.+++....
T Consensus 186 ~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~-~g~~p~~la~~~d~~~-lyv~~~--~v~~~d~~t~~~~~~ 259 (328)
T 3dsm_A 186 WTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFK-LGDWPSEVQLNGTRDT-LYWINN--DIWRMPVEADRVPVR 259 (328)
T ss_dssp EEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECC-TTCCCEEEEECTTSCE-EEEESS--SEEEEETTCSSCCSS
T ss_pred EEEECCCccCCccccCCceEEEEECCCCeEEEEEecC-CCCCceeEEEecCCCE-EEEEcc--EEEEEECCCCceeee
Confidence 6666554 78999999988743222222 1236789999999986 444443 899999998876543
No 202
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.42 E-value=9.3e-11 Score=110.65 Aligned_cols=226 Identities=9% Similarity=0.065 Sum_probs=148.7
Q ss_pred CC-CCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEE
Q 010748 206 RE-KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 284 (502)
Q Consensus 206 s~-~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~s 284 (502)
++ ++.++++....+.|..|+..+.... ...+...+.++++++++. ++++
T Consensus 21 ~~~~~~l~~~d~~~~~i~~~d~~~~~~~-----------------------------~~~~~~~~~~i~~~~dG~-l~v~ 70 (297)
T 3g4e_A 21 EEVSNSLLFVDIPAKKVCRWDSFTKQVQ-----------------------------RVTMDAPVSSVALRQSGG-YVAT 70 (297)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTTCCEE-----------------------------EEECSSCEEEEEEBTTSS-EEEE
T ss_pred ECCCCEEEEEECCCCEEEEEECCCCcEE-----------------------------EEeCCCceEEEEECCCCC-EEEE
Confidence 45 4667778888899999998753210 001345789999999954 4443
Q ss_pred EecCCcEEEEeCCCCeeeEeecc----CCCCeEEEEEcCCCCcEEEEEeCC---------CcEEEEecCCCCCccceEee
Q 010748 285 ASADKQVKIWDVAAGKCNLTLEH----HTDKVQAVAWNHHSPQILLSGSFD---------RSVVMKDARISTHSGFKWAV 351 (502)
Q Consensus 285 gs~dg~v~vwd~~~~~~~~~~~~----h~~~v~~l~~~~~~~~~l~s~s~d---------g~i~iwd~~~~~~~~~~~~~ 351 (502)
. ++.|.+||..+++....... ....+..+++.|+| +++++.... ....+|.+............
T Consensus 71 -~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG-~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~ 147 (297)
T 3g4e_A 71 -I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAG-RYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQ 147 (297)
T ss_dssp -E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTS-CEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEE
T ss_pred -E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCC-CEEEecCCcccccccccCCCcEEEEEECCCCEEEEeec
Confidence 4 56899999988865433221 12357889999999 665544321 23455555433333323444
Q ss_pred cCCeeEEEeCCCCCCEEEEEeCCCcEEEEECC--CCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcE
Q 010748 352 AADVESLAWDPHAEHSFVVSLEDGTIKGFDIR--TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMV 429 (502)
Q Consensus 352 ~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~--~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i 429 (502)
......++|+|++..++++.+..+.|..|++. ++... .......+..+......+++.++| ++.++....+.|
T Consensus 148 ~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~----~~~~~~~~~~~~~~p~g~~~d~~G-~lwva~~~~~~v 222 (297)
T 3g4e_A 148 VDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQIS----NRRSVYKLEKEEQIPDGMCIDAEG-KLWVACYNGGRV 222 (297)
T ss_dssp ESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEE----EEEEEEECCGGGCEEEEEEEBTTS-CEEEEEETTTEE
T ss_pred cccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCccc----CcEEEEECCCCCCCCCeeEECCCC-CEEEEEcCCCEE
Confidence 45678899999987666777778999999974 32100 001122233344567899999998 788887778889
Q ss_pred EEEECCCCCeeEEEEecCCCCcEEEEEEc-CCCCcEEEEEeCC
Q 010748 430 KLWDLSNNQPSCIASRNPKAGAVFSVAFS-EDSPFVLAIGGSK 471 (502)
Q Consensus 430 ~vwd~~~~~~~~~~~~~~~~~~v~~~~~s-pd~~~ll~sg~~d 471 (502)
.+||..+++. +..+..+...+++++|. |++..|+++....
T Consensus 223 ~~~d~~tG~~--~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 223 IRLDPVTGKR--LQTVKLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp EEECTTTCCE--EEEEECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred EEEcCCCceE--EEEEECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 9999988773 44445555679999998 8888666666543
No 203
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.41 E-value=1.8e-11 Score=114.11 Aligned_cols=188 Identities=15% Similarity=0.106 Sum_probs=141.7
Q ss_pred cEEEEEecCCcEEEEeCCCCeeeEeeccCC-CCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeec--CCee
Q 010748 280 NILASASADKQVKIWDVAAGKCNLTLEHHT-DKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVA--ADVE 356 (502)
Q Consensus 280 ~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~--~~v~ 356 (502)
++|++++.++.|.+||..+|+.+.++..+. ..+.++.+.|+| ++|+ +.++.|..||. +++..- .+... ..+.
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG-~ilv--s~~~~V~~~d~-~G~~~W-~~~~~~~~~~~ 80 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAG-EILF--SYSKGAKMITR-DGRELW-NIAAPAGCEMQ 80 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTS-CEEE--ECBSEEEEECT-TSCEEE-EEECCTTCEEE
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCC-CEEE--eCCCCEEEECC-CCCEEE-EEcCCCCcccc
Confidence 689999999999999999999999998765 578999999999 7777 45788999998 555332 23222 4678
Q ss_pred EEEeCCCCCCEEEEEeC-CCcEEEEECCCCCCCCCCCCCccceEEec------cCCCeeEEEEcCCCCCEEEEEeCCCcE
Q 010748 357 SLAWDPHAEHSFVVSLE-DGTIKGFDIRTAKSDPDSTSQQSSFTLHA------HDKAVCTISYNPLVPNLLATGSTDKMV 429 (502)
Q Consensus 357 ~v~~~~~~~~~~~~~~~-dg~v~i~d~~~~~~~~~~~~~~~~~~~~~------h~~~v~~l~~sp~~~~~l~t~s~dg~i 429 (502)
++.+.+++. ++++.+. ++.|..++. .+ +.++.+.. +......+++.+++ +++++.+.++.|
T Consensus 81 ~~~~~~dG~-~lv~~~~~~~~v~~vd~-~G---------k~l~~~~~~~~~~~~~~~~~~v~~~~~G-~~lv~~~~~~~v 148 (276)
T 3no2_A 81 TARILPDGN-ALVAWCGHPSTILEVNM-KG---------EVLSKTEFETGIERPHAQFRQINKNKKG-NYLVPLFATSEV 148 (276)
T ss_dssp EEEECTTSC-EEEEEESTTEEEEEECT-TS---------CEEEEEEECCSCSSGGGSCSCCEECTTS-CEEEEETTTTEE
T ss_pred ccEECCCCC-EEEEecCCCCEEEEEeC-CC---------CEEEEEeccCCCCcccccccCceECCCC-CEEEEecCCCEE
Confidence 889999876 6776666 777887775 33 44444432 22245566788888 899999999999
Q ss_pred EEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccc
Q 010748 430 KLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 430 ~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
.+||.. ++ .+..+... ..+.++.+.+++. ++++++.+++|..+|..+++.+.+.-
T Consensus 149 ~~~d~~-G~--~~w~~~~~-~~~~~~~~~~~g~-~~v~~~~~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 149 REIAPN-GQ--LLNSVKLS-GTPFSSAFLDNGD-CLVACGDAHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp EEECTT-SC--EEEEEECS-SCCCEEEECTTSC-EEEECBTTSEEEEECTTTCCEEEEEE
T ss_pred EEECCC-CC--EEEEEECC-CCccceeEcCCCC-EEEEeCCCCeEEEEeCcCCcEEEEec
Confidence 999998 77 34454433 3456778899998 57777778899999999898876654
No 204
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.40 E-value=9.9e-12 Score=120.28 Aligned_cols=172 Identities=14% Similarity=0.109 Sum_probs=129.5
Q ss_pred ceeeEEeccCCCcEEEEEecCCcEEEEeCCCCe-----------eeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEE
Q 010748 268 SVLGLAWNKEFRNILASASADKQVKIWDVAAGK-----------CNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVM 336 (502)
Q Consensus 268 ~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~-----------~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~i 336 (502)
.++.|++++. ..+|++|+.+ .+++|++...+ ..... .+.. |+.|+| ++ .+|+++ .++.|++
T Consensus 39 ~~nlLais~~-~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~-~~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNS-KSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HG-DQVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEETT-TTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ET-TEEEEE-ESSEEEE
T ss_pred cccEEEEcCC-CCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CC-CEEEEE-cCCcEEE
Confidence 6899999999 4588888887 46669875433 11222 3566 999999 66 788888 8899999
Q ss_pred EecCCCCCccceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCC
Q 010748 337 KDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLV 416 (502)
Q Consensus 337 wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~ 416 (502)
||+++.........+...+.++.+.+. .+++++.+|.|.+||+... .... +...|+|++|+|.|
T Consensus 111 ~dv~sl~~~~~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~---------~~~~----~~~~Vs~v~WSpkG 174 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTK---------STKQ----LAQNVTSFDVTNSQ 174 (388)
T ss_dssp EESSSTTCEEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTC---------CEEE----EEESEEEEEECSSE
T ss_pred EEchhhhccCccceeecceeeEEecCC---CEEEEECCCCEEEEEccCC---------cccc----ccCCceEEEEcCCc
Confidence 999987755545566777888887763 2888899999999999876 2221 44689999999976
Q ss_pred CCEEEEEeCCCcEEEEECCCCCeeEEEEe------c---CCCCcEEEEEEcCCCCcEEE
Q 010748 417 PNLLATGSTDKMVKLWDLSNNQPSCIASR------N---PKAGAVFSVAFSEDSPFVLA 466 (502)
Q Consensus 417 ~~~l~t~s~dg~i~vwd~~~~~~~~~~~~------~---~~~~~v~~~~~spd~~~ll~ 466 (502)
++.|..||++++|+...........+ . +|...|.++.|.+++.|+++
T Consensus 175 ---~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 175 ---LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp ---EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred ---eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 67899999999998877652113333 2 36788999999999987544
No 205
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.37 E-value=1.1e-09 Score=102.75 Aligned_cols=229 Identities=9% Similarity=0.027 Sum_probs=156.8
Q ss_pred CCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEE
Q 010748 206 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASA 285 (502)
Q Consensus 206 s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sg 285 (502)
.++|++.++...++.|.+|+.. +.. .. .....+...+.++++.++ +.++++.
T Consensus 28 d~~g~l~v~~~~~~~v~~~~~~-~~~-~~-------------------------~~~~~~~~~~~~i~~~~~-g~l~v~~ 79 (300)
T 2qc5_A 28 SEDGKVWFTQHKANKISSLDQS-GRI-KE-------------------------FEVPTPDAKVMCLIVSSL-GDIWFTE 79 (300)
T ss_dssp CTTSCEEEEETTTTEEEEECTT-SCE-EE-------------------------EECSSTTCCEEEEEECTT-SCEEEEE
T ss_pred CCCCCEEEEcCCCCeEEEECCC-Cce-EE-------------------------EECCCCCCcceeEEECCC-CCEEEEe
Confidence 6789888887778999999876 221 10 001123456889999988 4566666
Q ss_pred ecCCcEEEEeCCCCeeeE-eeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEe-ecCCeeEEEeCCC
Q 010748 286 SADKQVKIWDVAAGKCNL-TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA-VAADVESLAWDPH 363 (502)
Q Consensus 286 s~dg~v~vwd~~~~~~~~-~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-~~~~v~~v~~~~~ 363 (502)
..++.|..||.. ++... .+......+.++++.+++ .++++...++.|..++.. +........ ....+..++++++
T Consensus 80 ~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~ 156 (300)
T 2qc5_A 80 NGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNG-DIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSD 156 (300)
T ss_dssp TTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTT
T ss_pred cCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCC-CEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCC
Confidence 667889999987 55432 223244678999999988 777777668899999987 333221111 2356889999997
Q ss_pred CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEE
Q 010748 364 AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 443 (502)
Q Consensus 364 ~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~ 443 (502)
+. ++++...++.|..|+. .+. ........+...+.++++.+++ .+.++....+.|.+|+. ++... ..
T Consensus 157 g~-l~v~~~~~~~i~~~~~-~g~--------~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~-~g~~~-~~ 223 (300)
T 2qc5_A 157 NA-LWFTENQNNSIGRITN-TGK--------LEEYPLPTNAAAPVGITSGNDG-ALWFVEIMGNKIGRITT-TGEIS-EY 223 (300)
T ss_dssp SS-EEEEETTTTEEEEECT-TCC--------EEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECT-TCCEE-EE
T ss_pred CC-EEEEecCCCeEEEECC-CCc--------EEEeeCCCCCCCcceEEECCCC-CEEEEccCCCEEEEEcC-CCcEE-EE
Confidence 65 5666666788999998 331 1222223344568899999987 77777666778999998 44422 22
Q ss_pred EecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEEC
Q 010748 444 SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 479 (502)
Q Consensus 444 ~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~ 479 (502)
....+...+.++++++++. ++++...++.|.+|+.
T Consensus 224 ~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 224 DIPTPNARPHAITAGKNSE-IWFTEWGANQIGRITN 258 (300)
T ss_dssp ECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECT
T ss_pred ECCCCCCCceEEEECCCCC-EEEeccCCCeEEEECC
Confidence 3334456789999999998 5666656789999998
No 206
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.36 E-value=7.6e-11 Score=114.07 Aligned_cols=175 Identities=13% Similarity=0.131 Sum_probs=125.7
Q ss_pred CCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEE
Q 010748 206 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASA 285 (502)
Q Consensus 206 s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sg 285 (502)
++...++++|+.+ .+.||++........ ......... ....+.. |+.|+| + +++|+++
T Consensus 46 s~~~gll~a~~~~-~l~v~~~~~l~~~~~----------------~~~~~~~~~-~~~~lp~-V~~l~f--d-~~~L~v~ 103 (388)
T 1xip_A 46 SNSKSLFVAASGS-KAVVGELQLLRDHIT----------------SDSTPLTFK-WEKEIPD-VIFVCF--H-GDQVLVS 103 (388)
T ss_dssp ETTTTEEEEEETT-EEEEEEHHHHHHHHH----------------SSSCCCCCS-EEEECTT-EEEEEE--E-TTEEEEE
T ss_pred cCCCCEEEEeCCC-EEEEEEhhHhhhhhc----------------cccccccce-EEeeCCC-eeEEEE--C-CCEEEEE
Confidence 6788899999887 455699754221000 000000110 1123556 999999 5 5688888
Q ss_pred ecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCC
Q 010748 286 SADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAE 365 (502)
Q Consensus 286 s~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~ 365 (502)
.++.|++||+.+.........|...+.++.+.+. .+++++.||.|.+||+...... .+...|+|++|+|.|
T Consensus 104 -~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~~~~----~~~~~Vs~v~WSpkG- 174 (388)
T 1xip_A 104 -TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTKSTK----QLAQNVTSFDVTNSQ- 174 (388)
T ss_dssp -ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTCCEE----EEEESEEEEEECSSE-
T ss_pred -cCCcEEEEEchhhhccCccceeecceeeEEecCC---CEEEEECCCCEEEEEccCCccc----cccCCceEEEEcCCc-
Confidence 8899999999877666666677888988887754 3888999999999999976643 255689999999976
Q ss_pred CEEEEEeCCCcEEEEECCCCCCCCCCCCCcc--ceEE------e---ccCCCeeEEEEcCCCCCEEEEE
Q 010748 366 HSFVVSLEDGTIKGFDIRTAKSDPDSTSQQS--SFTL------H---AHDKAVCTISYNPLVPNLLATG 423 (502)
Q Consensus 366 ~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~--~~~~------~---~h~~~v~~l~~sp~~~~~l~t~ 423 (502)
+++|..||.+++|+.... .. ...+ . +|...|.+|.|.+++ .++++-
T Consensus 175 --~~vg~~dg~i~~~~~~~~---------~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~-~flv~y 231 (388)
T 1xip_A 175 --LAVLLKDRSFQSFAWRNG---------EMEKQFEFSLPSELEELPVEEYSPLSVTILSPQ-DFLAVF 231 (388)
T ss_dssp --EEEEETTSCEEEEEEETT---------EEEEEEEECCCHHHHTSCTTTSEEEEEEESSSS-EEEEEE
T ss_pred --eEEEEcCCcEEEEcCCCc---------cccccceecCCcccccccCCCeeEEEEEEecCC-eEEEEE
Confidence 678999999999988764 21 3334 2 378899999999987 666663
No 207
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.36 E-value=1.6e-10 Score=113.41 Aligned_cols=293 Identities=12% Similarity=0.076 Sum_probs=177.1
Q ss_pred CCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec----------CC
Q 010748 149 PNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS----------ME 218 (502)
Q Consensus 149 p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~----------~d 218 (502)
|+++.+.++........-.|++++.... .+...+.+...| .+.+ +|+|++|+++. .+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~-----~vv~~I~vG~~P-gia~-------SpDgk~lyVan~~~~~~~~G~~~ 148 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTG-----RILGMTDGGFLP-HPVA-------AEDGSFFAQASTVFERIARGKRT 148 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTT-----EEEEEEEECSSC-EEEE-------CTTSSCEEEEEEEEEETTEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCC-----EEEEEEECCCCC-ceEE-------CCCCCEEEEEeccccccccCCCC
Confidence 5566665555321000037777776643 233445555566 5555 89999998886 36
Q ss_pred CcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEec--CCcEEEEeC
Q 010748 219 PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA--DKQVKIWDV 296 (502)
Q Consensus 219 g~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~--dg~v~vwd~ 296 (502)
+.|.++|..+......+.+-+. . .+ ........+.|+|+++ +|+.+.. +++|.+.|+
T Consensus 149 ~~VsviD~~t~~vv~~I~v~g~---------------~----r~-~~g~~P~~~~~spDGk-~lyV~n~~~~~~VsVID~ 207 (426)
T 3c75_H 149 DYVEVFDPVTFLPIADIELPDA---------------P----RF-LVGTYQWMNALTPDNK-NLLFYQFSPAPAVGVVDL 207 (426)
T ss_dssp EEEEEECTTTCCEEEEEEETTC---------------C----CC-CBSCCGGGSEECTTSS-EEEEEECSSSCEEEEEET
T ss_pred CEEEEEECCCCcEEEEEECCCc---------------c----cc-ccCCCcceEEEcCCCC-EEEEEecCCCCeEEEEEC
Confidence 7899999987554333221100 0 00 0112345789999955 6666553 688999999
Q ss_pred CCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccc---eEeec-CC-eeEEEeCCCCCCEEEEE
Q 010748 297 AAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF---KWAVA-AD-VESLAWDPHAEHSFVVS 371 (502)
Q Consensus 297 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~---~~~~~-~~-v~~v~~~~~~~~~~~~~ 371 (502)
.+++.+.++..- . +....|.+...+++.+.||.+.+.++.+.+.... .+... .+ ...+.+.+++.. ++..
T Consensus 208 ~t~kvv~~I~v~-g---~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~-~~~~ 282 (426)
T 3c75_H 208 EGKTFDRMLDVP-D---CYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGR-LVWP 282 (426)
T ss_dssp TTTEEEEEEECC-S---EEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCE-EEEE
T ss_pred CCCeEEEEEEcC-C---ceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCE-EEEE
Confidence 999998888631 1 1334455556777888899888888844433211 01111 11 123467887764 4444
Q ss_pred eCCCcEEEEECCCCCCCCCCCCCccceEEe--------ccCCCeeEEEEcCCCCCEEEEEe---------CCCcEEEEEC
Q 010748 372 LEDGTIKGFDIRTAKSDPDSTSQQSSFTLH--------AHDKAVCTISYNPLVPNLLATGS---------TDKMVKLWDL 434 (502)
Q Consensus 372 ~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~--------~h~~~v~~l~~sp~~~~~l~t~s---------~dg~i~vwd~ 434 (502)
+..+.|.+.|+....... ...+.+. ........++++|++.+++++.. ..+.|.++|+
T Consensus 283 s~~g~V~ViD~~~~~~~v-----~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~ 357 (426)
T 3c75_H 283 TYTGKIFQADLTAEGATF-----RAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNA 357 (426)
T ss_dssp BTTSEEEEEEECSSCEEE-----CCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEET
T ss_pred eCCCcEEEEeccCCceEE-----eeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEEC
Confidence 567899999986541100 0001110 01122234689998845555433 1357999999
Q ss_pred CCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEe-CCCcEEEEECCCCcccccc
Q 010748 435 SNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGG-SKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 435 ~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~-~dg~i~vwd~~~~~~~~~~ 488 (502)
.+.+........ ....++.|+|+++.+++++. .++.|.|+|+.+++.++++
T Consensus 358 ~T~kvv~~I~vg---~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 358 ETGERINKIELG---HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TTCCEEEEEEEE---EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CCCeEEEEEECC---CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 998843333222 34789999999983455555 6899999999999998775
No 208
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.34 E-value=4.9e-10 Score=106.16 Aligned_cols=243 Identities=10% Similarity=0.113 Sum_probs=151.0
Q ss_pred ccccccccCCCceEEE-------EEecCCcceeEEEEEecCCCCCCCeeeeec---cccCCCcceeeeecCCCCCCCC-C
Q 010748 141 DLEDMTINPNDAVIVC-------ARNEDDVSHLEVYILEESDGGDPNLYVHHH---IIIPAFPLCMAWLDCPLKDREK-G 209 (502)
Q Consensus 141 ~v~~~~~~p~~~~l~~-------~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~s~~-~ 209 (502)
...++.|.|+++++++ +...+ .|+.|+...+ .+..... ......|.++.+ +++ |
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~-----~i~~~d~~~g---~~~~~~~~~~~~~~~~~~~i~~-------~~~~g 83 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAG-----EILRIDLKTG---KKTVICKPEVNGYGGIPAGCQC-------DRDAN 83 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECC-----EEEEECTTTC---CEEEEECCEETTEECCEEEEEE-------CSSSS
T ss_pred CccCceECCCCCEEEEEeccccCCCCCC-----EEEEEeCCCC---cEEEEEecccCCCCCCCceEEE-------ecCCC
Confidence 4567889999988887 45554 6777775443 2221111 001234555555 677 6
Q ss_pred CEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecC-
Q 010748 210 NFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD- 288 (502)
Q Consensus 210 ~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~d- 288 (502)
+++++.. .+.|.+|+.+ +... ... .. .....+...+.++++.+++ +++++...+
T Consensus 84 ~l~v~~~-~~~l~~~d~~-g~~~-~~~-~~--------------------~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~ 138 (314)
T 1pjx_A 84 QLFVADM-RLGLLVVQTD-GTFE-EIA-KK--------------------DSEGRRMQGCNDCAFDYEG-NLWITAPAGE 138 (314)
T ss_dssp EEEEEET-TTEEEEEETT-SCEE-ECC-SB--------------------CTTSCBCBCCCEEEECTTS-CEEEEECBCB
T ss_pred cEEEEEC-CCCEEEEeCC-CCEE-EEE-ec--------------------cCCCccccCCcCEEECCCC-CEEEEecCcc
Confidence 6555554 4478889876 3211 000 00 0001123468899999984 566666554
Q ss_pred --------------CcEEEEeCCCCeeeEeeccCCCCeEEEEEc----CCCCcEEEEEeCCCcEEEEecC-CCCCcc--c
Q 010748 289 --------------KQVKIWDVAAGKCNLTLEHHTDKVQAVAWN----HHSPQILLSGSFDRSVVMKDAR-ISTHSG--F 347 (502)
Q Consensus 289 --------------g~v~vwd~~~~~~~~~~~~h~~~v~~l~~~----~~~~~~l~s~s~dg~i~iwd~~-~~~~~~--~ 347 (502)
+.|..|+.. ++..... .+......++|+ |++..++++...++.|.+|++. .+.... .
T Consensus 139 ~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~ 216 (314)
T 1pjx_A 139 VAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKV 216 (314)
T ss_dssp CTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEE
T ss_pred cccccccccccCCCCeEEEECCC-CCEEEec-cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceE
Confidence 567778765 5543332 234457889999 9883344555568999999986 222111 1
Q ss_pred eEeec----CCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCC-EEEE
Q 010748 348 KWAVA----ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPN-LLAT 422 (502)
Q Consensus 348 ~~~~~----~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~-~l~t 422 (502)
..... ..+..+++++++. ++++...++.|.+||..++ ..+..+..+...+.+++|+|++ + ++++
T Consensus 217 ~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~~~i~~~d~~~g---------~~~~~~~~~~~~~~~i~~~~dg-~~l~v~ 285 (314)
T 1pjx_A 217 WGHIPGTHEGGADGMDFDEDNN-LLVANWGSSHIEVFGPDGG---------QPKMRIRCPFEKPSNLHFKPQT-KTIFVT 285 (314)
T ss_dssp EEECCCCSSCEEEEEEEBTTCC-EEEEEETTTEEEEECTTCB---------SCSEEEECSSSCEEEEEECTTS-SEEEEE
T ss_pred EEECCCCCCCCCCceEECCCCC-EEEEEcCCCEEEEEcCCCC---------cEeEEEeCCCCCceeEEECCCC-CEEEEE
Confidence 11111 4578899999764 6666667889999998755 3445556666789999999988 6 5556
Q ss_pred EeCCCcEEEEECCC
Q 010748 423 GSTDKMVKLWDLSN 436 (502)
Q Consensus 423 ~s~dg~i~vwd~~~ 436 (502)
...++.|..|++..
T Consensus 286 ~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 286 EHENNAVWKFEWQR 299 (314)
T ss_dssp ETTTTEEEEEECSS
T ss_pred eCCCCeEEEEeCCC
Confidence 66678899999865
No 209
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.34 E-value=2.4e-10 Score=122.12 Aligned_cols=249 Identities=12% Similarity=0.064 Sum_probs=154.9
Q ss_pred cccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCC-cceeeeecCCCCCCCCCCEEEEecCC
Q 010748 140 EDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAF-PLCMAWLDCPLKDREKGNFMAVGSME 218 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~~la~g~~d 218 (502)
..+..+.|||+|++||.+...+......||+++...+ .....+ ++.. ...+.| +|+ +.|+.++.+
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg---~~~~~~---~~~~~~~~~~w-------spD-~~l~~~~~~ 228 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADG---KPLADE---LKWVKFSGLAW-------LGN-DALLYSRFA 228 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTC---CEEEEE---EEEEESCCCEE-------STT-SEEEEEECC
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCC---CCCCcc---CCCceeccEEE-------ECC-CEEEEEEec
Confidence 4678899999999999987664332356777776665 332111 1110 123444 899 999888776
Q ss_pred Cc--------------EEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEE
Q 010748 219 PA--------------IEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 284 (502)
Q Consensus 219 g~--------------I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~s 284 (502)
+. |++|++.+..... ........|...+..+.|+|+|+ +|+.
T Consensus 229 ~~~~~~~~~~~~~~~~v~~~~lgt~~~~~-----------------------~lv~~~~~~~~~~~~~~~SpDG~-~l~~ 284 (741)
T 1yr2_A 229 EPKEGQAFQALNYNQTVWLHRLGTPQSAD-----------------------QPVFATPELPKRGHGASVSSDGR-WVVI 284 (741)
T ss_dssp CC--------CCCCCEEEEEETTSCGGGC-----------------------EEEECCTTCTTCEEEEEECTTSC-EEEE
T ss_pred CcccccccccCCCCCEEEEEECCCCchhC-----------------------EEEeccCCCCeEEEEEEECCCCC-EEEE
Confidence 54 8888886432111 11111123444588999999965 5655
Q ss_pred EecC-----CcEEEEeCCCC--eeeEeeccCCCCeEEEEEcCCCCcEEEEEeC----CCcEEEEecCCCC-CccceEe-e
Q 010748 285 ASAD-----KQVKIWDVAAG--KCNLTLEHHTDKVQAVAWNHHSPQILLSGSF----DRSVVMKDARIST-HSGFKWA-V 351 (502)
Q Consensus 285 gs~d-----g~v~vwd~~~~--~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~----dg~i~iwd~~~~~-~~~~~~~-~ 351 (502)
.+.+ ..|++||+.++ ++...+..+...+.... +|++ ..|+..+. ++.|.+|++.++. ....... .
T Consensus 285 ~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg-~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~ 362 (741)
T 1yr2_A 285 TSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVG-DQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPES 362 (741)
T ss_dssp EEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEET-TEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCC
T ss_pred EEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccC-CEEEEEECCCCCCCEEEEEeCCCCccccEEEecCC
Confidence 5544 38999999877 31455555555555554 4777 55555554 3459999988752 2122222 2
Q ss_pred cCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEec-cCCCeeEEEEcCCCCCEEEEEeC---CC
Q 010748 352 AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA-HDKAVCTISYNPLVPNLLATGST---DK 427 (502)
Q Consensus 352 ~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~sp~~~~~l~t~s~---dg 427 (502)
...+..++|. +..++++...++..++|.+... ......+.. +.+.+..+.++|++..++++.+. .+
T Consensus 363 ~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~--------g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~ 432 (741)
T 1yr2_A 363 KDNLESVGIA--GNRLFASYIHDAKSQVLAFDLD--------GKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPA 432 (741)
T ss_dssp SSEEEEEEEE--BTEEEEEEEETTEEEEEEEETT--------SCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEE
T ss_pred CCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCC--------CCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCC
Confidence 3346677776 3557888888998777765422 133444443 35678899999988556555443 47
Q ss_pred cEEEEECCCCC
Q 010748 428 MVKLWDLSNNQ 438 (502)
Q Consensus 428 ~i~vwd~~~~~ 438 (502)
+|++||+.+++
T Consensus 433 ~i~~~d~~tg~ 443 (741)
T 1yr2_A 433 TVLALDPATAK 443 (741)
T ss_dssp EEEEEETTTTE
T ss_pred EEEEEECCCCc
Confidence 79999998876
No 210
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.32 E-value=1.6e-10 Score=122.42 Aligned_cols=236 Identities=15% Similarity=0.100 Sum_probs=148.5
Q ss_pred CCCCCEEEEe-----cCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCc
Q 010748 206 REKGNFMAVG-----SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRN 280 (502)
Q Consensus 206 s~~~~~la~g-----~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~ 280 (502)
||+|++||.+ +....|+|||+.+++.+.. . .+......++|+ ++ .
T Consensus 137 SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~--------------------------~--~~~~k~~~~~Ws-Dg-~ 186 (693)
T 3iuj_A 137 SRDGRILAYSLSLAGSDWREIHLMDVESKQPLET--------------------------P--LKDVKFSGISWL-GN-E 186 (693)
T ss_dssp CTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE--------------------------E--EEEEESCCCEEE-TT-T
T ss_pred CCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc--------------------------c--cCCceeccEEEe-CC-C
Confidence 8999999953 3336799999987543211 0 011113578899 85 4
Q ss_pred EEEEEecCC-------------cEEEEeCCCCe----eeEeecc-CCCCeEEEEEcCCCCcEEEEEeC---CCcEEEEec
Q 010748 281 ILASASADK-------------QVKIWDVAAGK----CNLTLEH-HTDKVQAVAWNHHSPQILLSGSF---DRSVVMKDA 339 (502)
Q Consensus 281 ~l~sgs~dg-------------~v~vwd~~~~~----~~~~~~~-h~~~v~~l~~~~~~~~~l~s~s~---dg~i~iwd~ 339 (502)
.|+.++.+. .|++|++.++. ++..... |...+.++.|+|++..++++.+. .+.|.++|+
T Consensus 187 ~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~ 266 (693)
T 3iuj_A 187 GFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDL 266 (693)
T ss_dssp EEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEET
T ss_pred EEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEEC
Confidence 666666664 39999998764 3333344 55567899999999544455443 258999999
Q ss_pred CCCCC-ccceEeecCCeeEEEeCCCCCCEEEEEeCC---CcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCC
Q 010748 340 RISTH-SGFKWAVAADVESLAWDPHAEHSFVVSLED---GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPL 415 (502)
Q Consensus 340 ~~~~~-~~~~~~~~~~v~~v~~~~~~~~~~~~~~~d---g~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~ 415 (502)
.++.. .............. |++++..+++.+..+ +.|..+++.++. ......+..|...+. .|+++
T Consensus 267 ~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~-------~~~~~~l~~~~~~~~--~~s~~ 336 (693)
T 3iuj_A 267 SQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPG-------PAHWRDLIPERQQVL--TVHSG 336 (693)
T ss_dssp TSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCC-------GGGCEEEECCCSSCE--EEEEE
T ss_pred CCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCC-------ccccEEEecCCCCEE--EEEEE
Confidence 87642 22233333344444 666667666666544 679999998752 122345666666555 88888
Q ss_pred CCCEEEEEeCCC--cEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCC---CcEEEEECCCCc
Q 010748 416 VPNLLATGSTDK--MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSK---GKLEIWDTLSDA 483 (502)
Q Consensus 416 ~~~~l~t~s~dg--~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~d---g~i~vwd~~~~~ 483 (502)
+..++++...++ .|++|++..+.. ....+ ...+.+..+.++|++..++++.++. +.|..||+.+++
T Consensus 337 g~~lv~~~~~~g~~~l~~~d~~g~~~-~~l~~-p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 337 SGYLFAEYMVDATARVEQFDYEGKRV-REVAL-PGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp TTEEEEEEEETTEEEEEEECTTSCEE-EEECC-SSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred CCEEEEEEEECCeeEEEEEECCCCee-EEeec-CCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 744444444555 588999875542 22222 2446688888899988655554432 789999997765
No 211
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.29 E-value=2.1e-09 Score=102.70 Aligned_cols=223 Identities=12% Similarity=0.057 Sum_probs=140.6
Q ss_pred CCC-CCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEE
Q 010748 206 REK-GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 284 (502)
Q Consensus 206 s~~-~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~s 284 (502)
+|+ +.+++++...+.|.+|+..+.... . + .+...+.+++|++++ .++++
T Consensus 57 ~~~~~~l~~~d~~~~~i~~~d~~~~~~~--------------------------~--~-~~~~~v~~i~~~~dg-~l~v~ 106 (326)
T 2ghs_A 57 DPASGTAWWFNILERELHELHLASGRKT--------------------------V--H-ALPFMGSALAKISDS-KQLIA 106 (326)
T ss_dssp ETTTTEEEEEEGGGTEEEEEETTTTEEE--------------------------E--E-ECSSCEEEEEEEETT-EEEEE
T ss_pred eCCCCEEEEEECCCCEEEEEECCCCcEE--------------------------E--E-ECCCcceEEEEeCCC-eEEEE
Confidence 565 667777777899999998642110 0 0 123568999999984 45554
Q ss_pred EecCCcEEEEeCCCCeeeEeecc----CCCCeEEEEEcCCCCcEEEEEeC------CCcEEEEecCCCCCccceEeecCC
Q 010748 285 ASADKQVKIWDVAAGKCNLTLEH----HTDKVQAVAWNHHSPQILLSGSF------DRSVVMKDARISTHSGFKWAVAAD 354 (502)
Q Consensus 285 gs~dg~v~vwd~~~~~~~~~~~~----h~~~v~~l~~~~~~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~~~ 354 (502)
+.+ .|.+||..+++....... ....+..+.++|++ +++++... .+.|..++ .++. .........
T Consensus 107 -~~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G-~l~v~~~~~~~~~~~~~l~~~~--~g~~-~~~~~~~~~ 180 (326)
T 2ghs_A 107 -SDD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSG-ALWIGTMGRKAETGAGSIYHVA--KGKV-TKLFADISI 180 (326)
T ss_dssp -ETT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTS-CEEEEEEETTCCTTCEEEEEEE--TTEE-EEEEEEESS
T ss_pred -ECC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCC-CEEEEeCCCcCCCCceEEEEEe--CCcE-EEeeCCCcc
Confidence 444 499999988875432221 12358899999999 66555432 24455555 3322 222233345
Q ss_pred eeEEEeCCCCCCEEEEEeCCCcEEEEECC--CC-CCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEE
Q 010748 355 VESLAWDPHAEHSFVVSLEDGTIKGFDIR--TA-KSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKL 431 (502)
Q Consensus 355 v~~v~~~~~~~~~~~~~~~dg~v~i~d~~--~~-~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~v 431 (502)
...++|+|++..++++.+.++.|.+|++. ++ .... ...+..+........++++.+++ .+.++....+.|.+
T Consensus 181 ~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~----~~~~~~~~~~~~~p~gi~~d~~G-~lwva~~~~~~v~~ 255 (326)
T 2ghs_A 181 PNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGK----AEVFIDSTGIKGGMDGSVCDAEG-HIWNARWGEGAVDR 255 (326)
T ss_dssp EEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSC----CEEEEECTTSSSEEEEEEECTTS-CEEEEEETTTEEEE
T ss_pred cCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccC----ceEEEECCCCCCCCCeeEECCCC-CEEEEEeCCCEEEE
Confidence 77899999887555666677899999986 32 1100 01122222234567889999988 77777666788999
Q ss_pred EECCCCCeeEEEEecCCCCcEEEEEEc-CCCCcEEEEEeCCC
Q 010748 432 WDLSNNQPSCIASRNPKAGAVFSVAFS-EDSPFVLAIGGSKG 472 (502)
Q Consensus 432 wd~~~~~~~~~~~~~~~~~~v~~~~~s-pd~~~ll~sg~~dg 472 (502)
|+. +++ .+..+..+...+++++|+ |++..++++....+
T Consensus 256 ~d~-~g~--~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 256 YDT-DGN--HIARYEVPGKQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp ECT-TCC--EEEEEECSCSBEEEEEEESTTSCEEEEEEBCTT
T ss_pred ECC-CCC--EEEEEECCCCCcEEEEEecCCCCEEEEEecCCC
Confidence 998 454 233444455679999998 88876556555543
No 212
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.28 E-value=1.1e-09 Score=115.94 Aligned_cols=253 Identities=12% Similarity=0.106 Sum_probs=158.3
Q ss_pred CccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCC-cceeeeecCCCCCCCCCCEEEEec
Q 010748 138 DSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAF-PLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~~la~g~ 216 (502)
+...+..+.|||+|++||.+...+..-...||+++...+ .....+ ++.. ...+.| + ||+.|+.++
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg---~~~~~~---~~~~k~~~~~W-------s-Dg~~l~y~~ 192 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESK---QPLETP---LKDVKFSGISW-------L-GNEGFFYSS 192 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTC---SEEEEE---EEEEESCCCEE-------E-TTTEEEEEE
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCC---CCCccc---cCCceeccEEE-------e-CCCEEEEEE
Confidence 445678889999999999877554332457777776655 322111 1111 123344 8 999999888
Q ss_pred CCCc-------------EEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccC-cccceeeEEeccCCCcEE
Q 010748 217 MEPA-------------IEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGS-HTDSVLGLAWNKEFRNIL 282 (502)
Q Consensus 217 ~dg~-------------I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~l~~~~~~~~~l 282 (502)
.+.. |++|++.+..... ........ |...+.++.|+|+++.++
T Consensus 193 ~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~-----------------------~~v~~~~~~~~~~~~~~~~SpDg~~l~ 249 (693)
T 3iuj_A 193 YDKPDGSELSARTDQHKVYFHRLGTAQEDD-----------------------RLVFGAIPAQHHRYVGATVTEDDRFLL 249 (693)
T ss_dssp SSCCC-------CCCCEEEEEETTSCGGGC-----------------------EEEESCSGGGCCSEEEEEECTTSCEEE
T ss_pred ecCcccccccccCCCcEEEEEECCCCcccc-----------------------eEEEecCCCCCeEEEEEEEcCCCCEEE
Confidence 7743 8889886532111 11112223 445578899999976555
Q ss_pred EEEec---CCcEEEEeCCCCe-eeEeeccCCCCeEEEEEcCCCCcEEEEEeCC---CcEEEEecCCCCCc--cceEeecC
Q 010748 283 ASASA---DKQVKIWDVAAGK-CNLTLEHHTDKVQAVAWNHHSPQILLSGSFD---RSVVMKDARISTHS--GFKWAVAA 353 (502)
Q Consensus 283 ~sgs~---dg~v~vwd~~~~~-~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~d---g~i~iwd~~~~~~~--~~~~~~~~ 353 (502)
++.+. ...|++||+.++. ....+..+....... |++++..+++++..+ +.|..+++.++... .....+..
T Consensus 250 ~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 328 (693)
T 3iuj_A 250 ISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQ 328 (693)
T ss_dssp EEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS
T ss_pred EEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCC
Confidence 55543 2589999998763 445555566666555 666664666666554 67999999876541 22344444
Q ss_pred CeeEEEeCCCCCCEEEEEeCCC--cEEEEECCCCCCCCCCCCCccceEEe-ccCCCeeEEEEcCCCCCEEEEEeC---CC
Q 010748 354 DVESLAWDPHAEHSFVVSLEDG--TIKGFDIRTAKSDPDSTSQQSSFTLH-AHDKAVCTISYNPLVPNLLATGST---DK 427 (502)
Q Consensus 354 ~v~~v~~~~~~~~~~~~~~~dg--~v~i~d~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~sp~~~~~l~t~s~---dg 427 (502)
.+. .|++++..++++...+| .|++|++... ....+. ...+.+..+.+++++..++++.+. -+
T Consensus 329 ~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~----------~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~ 396 (693)
T 3iuj_A 329 QVL--TVHSGSGYLFAEYMVDATARVEQFDYEGK----------RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPP 396 (693)
T ss_dssp SCE--EEEEETTEEEEEEEETTEEEEEEECTTSC----------EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCC
T ss_pred CEE--EEEEECCEEEEEEEECCeeEEEEEECCCC----------eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCC
Confidence 444 78888776666666666 5888887643 233333 234567778888887566665543 27
Q ss_pred cEEEEECCCCCee
Q 010748 428 MVKLWDLSNNQPS 440 (502)
Q Consensus 428 ~i~vwd~~~~~~~ 440 (502)
.|..||+.+++..
T Consensus 397 ~l~~~d~~~g~~~ 409 (693)
T 3iuj_A 397 TLYRFEPKSGAIS 409 (693)
T ss_dssp EEEEECTTTCCEE
T ss_pred EEEEEECCCCeEE
Confidence 8999999887643
No 213
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.25 E-value=3.9e-10 Score=108.75 Aligned_cols=282 Identities=13% Similarity=0.055 Sum_probs=166.3
Q ss_pred ccccccccCCCceEEEEEe-cCCcceeEEEEEecCCCCCCCeeeeec-----cccCCCcceeeeecCCCCCCCCCCEEEE
Q 010748 141 DLEDMTINPNDAVIVCARN-EDDVSHLEVYILEESDGGDPNLYVHHH-----IIIPAFPLCMAWLDCPLKDREKGNFMAV 214 (502)
Q Consensus 141 ~v~~~~~~p~~~~l~~~~~-~~~~~~l~v~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~s~~~~~la~ 214 (502)
....++++|+|+++++... .+.. ..||.++ .+ .+...-. ...-..|.++++ +++++++++
T Consensus 18 ~p~~va~~~~g~~~v~~~~~~~~~--~~l~~~~--~g---~~~~~p~~~~~~~~~~~~p~gv~~-------d~~g~L~v~ 83 (343)
T 2qe8_A 18 APGNITLTPDGRLFLSLHQFYQPE--MQVAELT--QD---GLIPFPPQSGNAIITFDTVLGIKS-------DGNGIVWML 83 (343)
T ss_dssp CEEEEEECTTSCEEEEECGGGCCS--CSEEEEE--TT---EEEESCCCCSSCCCCCSCEEEEEE-------CSSSEEEEE
T ss_pred CcceEEECCCCCEEEEeCCCCCCc--eEEEEEC--CC---CeecCCCcccCcccceeEeeEEEE-------cCCCcEEEE
Confidence 5678999999999888642 2211 5677776 22 2221100 000123444444 778887776
Q ss_pred ecC-----CCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEe---
Q 010748 215 GSM-----EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS--- 286 (502)
Q Consensus 215 g~~-----dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs--- 286 (502)
-.. .+.|.+||+.++..+..+. +. .....+...+..+++.++++.++++.+
T Consensus 84 D~g~~~~~~~~i~~~d~~tg~~~~~~~-~~--------------------~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~ 142 (343)
T 2qe8_A 84 DNGNQSKSVPKLVAWDTLNNQLSRVIY-LP--------------------PPITLSNSFVNDLAVDLIHNFVYISDPAPD 142 (343)
T ss_dssp ECHHHHTSCCEEEEEETTTTEEEEEEE-CC--------------------TTTSCTTCCCCEEEEETTTTEEEEEECCSG
T ss_pred cCCCCcCCCCeEEEEECCCCeEEEEEE-CC--------------------hhhcccccccceEEEecCCCEEEEEcCccC
Confidence 543 5789999987644222110 00 000123345789999986565666665
Q ss_pred cCCcEEEEeCCCCeeeEeeccCCCCeE-EEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCC
Q 010748 287 ADKQVKIWDVAAGKCNLTLEHHTDKVQ-AVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAE 365 (502)
Q Consensus 287 ~dg~v~vwd~~~~~~~~~~~~h~~~v~-~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~ 365 (502)
.++.|.+||+.+++..+.+.+|..... ...+.+++ ..+.+.+.++.+..|. ..+..++|+|++.
T Consensus 143 ~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g-~~~~~~~~~g~~~~~~--------------~~~~gia~s~dg~ 207 (343)
T 2qe8_A 143 DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDG-VPVQIGQPDGTVIRPH--------------LGVNGIVLDAENE 207 (343)
T ss_dssp GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETT-EECBEECTTSCEECCC--------------CCEEEEEECTTSC
T ss_pred CCCeEEEEECCCCCEEEEecCCCcccccccceeECC-EEEEeccCCCceecee--------------cccceeEeccCCC
Confidence 688999999998887777765432111 13334455 5666677777765543 2357799999876
Q ss_pred CEEEEEeCCC-cEEEEECCCCCCCCCCCCCc--cceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEE
Q 010748 366 HSFVVSLEDG-TIKGFDIRTAKSDPDSTSQQ--SSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCI 442 (502)
Q Consensus 366 ~~~~~~~~dg-~v~i~d~~~~~~~~~~~~~~--~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~ 442 (502)
.++++...+ .|..++........ ..... ......++......+++++++ .++++....+.|.+||..+++...+
T Consensus 208 -~ly~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~g~~g~pdgia~d~~G-~l~va~~~~~~V~~~d~~~G~~~~~ 284 (343)
T 2qe8_A 208 -WLYLSPMHSTSMYRIKSADLSNLQ-LTDAELGSKIERYSEKPICDGISIDKDH-NIYVGDLAHSAIGVITSADRAYKLL 284 (343)
T ss_dssp -EEEEEESSCSEEEEEEHHHHTCTT-CCHHHHHTTCEEEEECCSCSCEEECTTC-CEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred -EEEEEeCCCCeEEEEEHHHhcCCC-CChhhhhcceEecccCCCCceEEECCCC-CEEEEccCCCeEEEEECCCCCEEEE
Confidence 555555444 66666542110000 00000 011222445567789999987 8888888899999999855553333
Q ss_pred EEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEE
Q 010748 443 ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIW 477 (502)
Q Consensus 443 ~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vw 477 (502)
.. ..+...+.+++|.+++. ++++.+..+.+.+|
T Consensus 285 ~~-~~~~~~p~~va~~~~g~-l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 285 VT-DEKLSWTDSFNFGSDGY-LYFDCNQLHHSAPL 317 (343)
T ss_dssp EE-CGGGSCEEEEEECTTSC-EEEEECCGGGSGGG
T ss_pred EE-CCceecCCeeEECCCCc-EEEEeCcccccccc
Confidence 32 22345689999999987 67776655444333
No 214
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.24 E-value=4.5e-09 Score=103.67 Aligned_cols=239 Identities=11% Similarity=0.055 Sum_probs=152.0
Q ss_pred cccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCC
Q 010748 140 EDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEP 219 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~dg 219 (502)
.....++|+|+++++++....+ .|+.++.... .+...... ...|. ++| ++++++|+++..++
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~-----~I~~id~~~g---~~~~~~~~--~~~~~-ia~-------~~~g~~l~~~d~~~ 192 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDP-----RVRLISVDDN---KVTTVHPG--FKGGK-PAV-------TKDKQRVYSIGWEG 192 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTT-----EEEEEETTTT---EEEEEEET--CCBCB-CEE-------CTTSSEEEEEBSST
T ss_pred CCceEEEEeCCCCEEEEecCCC-----cEEEEECCCC---EEEEeecc--CCCCc-eeE-------ecCCCcEEEEecCC
Confidence 3567889999999777766444 6777776544 33221111 11222 444 78999998888766
Q ss_pred --cEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeCC
Q 010748 220 --AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVA 297 (502)
Q Consensus 220 --~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~ 297 (502)
.|.+|+........ .++ .....+...+.+++++|+++. |+.+..++.|+.||..
T Consensus 193 ~~~I~~~d~~~~~~~~---~~g--------------------~~~~~~~~~p~~iav~p~~g~-lyv~d~~~~I~~~d~~ 248 (409)
T 3hrp_A 193 THTVYVYMKASGWAPT---RIG--------------------QLGSTFSGKIGAVALDETEEW-LYFVDSNKNFGRFNVK 248 (409)
T ss_dssp TCEEEEEEGGGTTCEE---EEE--------------------ECCTTSCSCCCBCEECTTSSE-EEEECTTCEEEEEETT
T ss_pred CceEEEEEcCCCceeE---Eee--------------------eccchhcCCcEEEEEeCCCCe-EEEEECCCcEEEEECC
Confidence 67777764321100 000 000113456788999995454 4446778899999998
Q ss_pred CCeeeEe----eccCCCCe-E-EEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEee---------------cCCee
Q 010748 298 AGKCNLT----LEHHTDKV-Q-AVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---------------AADVE 356 (502)
Q Consensus 298 ~~~~~~~----~~~h~~~v-~-~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~---------------~~~v~ 356 (502)
++..... ..++...- . .++|+|++..++++-..++.|+.|+.... ....... -....
T Consensus 249 ~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~ 326 (409)
T 3hrp_A 249 TQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPN 326 (409)
T ss_dssp TCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEE
T ss_pred CCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCe
Confidence 7754322 22222222 3 99999965477777778899999987643 1112221 13478
Q ss_pred EEEeCCCCCCEEEEEe-CCCcEEEEECCCCCCCCCCCCCccceEEecc---------------CCCeeEEEEcCCCCCEE
Q 010748 357 SLAWDPHAEHSFVVSL-EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH---------------DKAVCTISYNPLVPNLL 420 (502)
Q Consensus 357 ~v~~~~~~~~~~~~~~-~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h---------------~~~v~~l~~sp~~~~~l 420 (502)
.++++|++. ++++-+ .++.|+.|++.++ .+..+.++ -.....+++++++ .++
T Consensus 327 gia~d~dG~-lyvad~~~~~~I~~~~~~~G----------~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g-~ly 394 (409)
T 3hrp_A 327 GMTVDEDGN-FYIVDGFKGYCLRKLDILDG----------YVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEG-GYW 394 (409)
T ss_dssp EEEECTTCC-EEEEETTTTCEEEEEETTTT----------EEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSS-EEE
T ss_pred EEEEeCCCC-EEEEeCCCCCEEEEEECCCC----------EEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCC-CEE
Confidence 899999875 677777 7899999997654 23333333 2357889999986 788
Q ss_pred EEEeCCCcEEEEEC
Q 010748 421 ATGSTDKMVKLWDL 434 (502)
Q Consensus 421 ~t~s~dg~i~vwd~ 434 (502)
++-..++.|+.+++
T Consensus 395 Vad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 395 IAEAWGKAIRKYAV 408 (409)
T ss_dssp EEESTTCEEEEEEE
T ss_pred EEECCCCeEEEEEe
Confidence 88888888887764
No 215
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.23 E-value=1.5e-08 Score=98.51 Aligned_cols=241 Identities=10% Similarity=0.011 Sum_probs=147.8
Q ss_pred cccccCCCceEEEEEecCC-----cceeEEEEEecCCCCCCCeeeeeccccC--------CCcceeeeecCCCCCCCCCC
Q 010748 144 DMTINPNDAVIVCARNEDD-----VSHLEVYILEESDGGDPNLYVHHHIIIP--------AFPLCMAWLDCPLKDREKGN 210 (502)
Q Consensus 144 ~~~~~p~~~~l~~~~~~~~-----~~~l~v~~~~~~~~~~~~l~~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~ 210 (502)
.+.|+|+++.|.++..... ...=.|.+++.... .. -....++ ..|..+.| +|+|+
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~---~~--~~~i~~~~~~~~~~g~~p~~~~~-------spDG~ 137 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF---LP--IADIELPDAPRFDVGPYSWMNAN-------TPNNA 137 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC---cE--EEEEECCCccccccCCCccceEE-------CCCCC
Confidence 8999999999998863100 00014556665432 21 1222222 23444444 89999
Q ss_pred EEEEecC--CCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecC
Q 010748 211 FMAVGSM--EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD 288 (502)
Q Consensus 211 ~la~g~~--dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~d 288 (502)
+|++++. ++.|.++| .++...... . ... .|+.+.|.+...+++.+.|
T Consensus 138 ~l~v~n~~~~~~v~viD-~t~~~~~~~--------------------------i-~~~---~~~~~~~~~~~~~~~~~~d 186 (373)
T 2mad_H 138 DLLFFQFAAGPAVGLVV-QGGSSDDQL--------------------------L-SSP---TCYHIHPGAPSTFYLLCAQ 186 (373)
T ss_pred EEEEEecCCCCeEEEEE-CCCCEEeEE--------------------------c-CCC---ceEEEEeCCCceEEEEcCC
Confidence 9999874 47899999 764322110 0 011 1244556666677888899
Q ss_pred CcEEEEeCCCCeeeEeec-----cCCCCe-EEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCcc-ceEe-----------
Q 010748 289 KQVKIWDVAAGKCNLTLE-----HHTDKV-QAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG-FKWA----------- 350 (502)
Q Consensus 289 g~v~vwd~~~~~~~~~~~-----~h~~~v-~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~-~~~~----------- 350 (502)
|.+.+++. +++.+.... ....++ ....+.+++..++++ +..+.+.+.|+....... ..+.
T Consensus 187 g~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~ 264 (373)
T 2mad_H 187 GGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWP-VYSGKILQADISAAGATNKAPIDALSGGRKADTW 264 (373)
T ss_pred CCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEE-cCCceEEEEeccCCcceEeeeeeecCCcccccce
Confidence 99999999 887664322 111221 234556666344444 477899999987543211 1111
Q ss_pred ecCCeeEEEeCCCCCCEEEEEe---------CCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEE
Q 010748 351 VAADVESLAWDPHAEHSFVVSL---------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLA 421 (502)
Q Consensus 351 ~~~~v~~v~~~~~~~~~~~~~~---------~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~ 421 (502)
.......+.++|++..++++.. ..+.|.++|+.+. +.+.++.. .....++.|+|++..+++
T Consensus 265 ~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~---------~vv~~i~~-g~~p~~i~~s~Dg~~~l~ 334 (373)
T 2mad_H 265 RPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG---------QTSSQISL-GHDVDAISVAQDGGPDLY 334 (373)
T ss_pred ecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC---------EEEEEEEC-CCCcCeEEECCCCCeEEE
Confidence 1233445788998775444432 1357999999886 55666643 335799999999843777
Q ss_pred EEe-CCCcEEEEECCCCCe
Q 010748 422 TGS-TDKMVKLWDLSNNQP 439 (502)
Q Consensus 422 t~s-~dg~i~vwd~~~~~~ 439 (502)
++. .++.|.+||+.+++.
T Consensus 335 v~~~~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 335 ALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred EEcCCCCeEEEEECCCCCE
Confidence 776 589999999999884
No 216
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.22 E-value=4e-09 Score=101.61 Aligned_cols=259 Identities=10% Similarity=0.066 Sum_probs=155.5
Q ss_pred cccccCCCceEEEEEecC-----CcceeEEEEEecCCCCCCCeeeeeccccC--------CCcceeeeecCCCCCCCCCC
Q 010748 144 DMTINPNDAVIVCARNED-----DVSHLEVYILEESDGGDPNLYVHHHIIIP--------AFPLCMAWLDCPLKDREKGN 210 (502)
Q Consensus 144 ~~~~~p~~~~l~~~~~~~-----~~~~l~v~~~~~~~~~~~~l~~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~ 210 (502)
.+.++|+++.|.++.... ....-.|.+++.... . .-..+.++ ..|..+.+ +|+|+
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~---~--v~~~I~v~~g~r~~~g~~P~~~a~-------spDGk 149 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL---L--PTADIELPDAPRFLVGTYPWMTSL-------TPDGK 149 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC---C--EEEEEEETTCCCCCBSCCGGGEEE-------CTTSS
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC---e--EEEEEECCCccccccCCCCceEEE-------cCCCC
Confidence 389999999988876310 000115667776543 2 22223332 24555554 89999
Q ss_pred EEEEecC--CCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecC
Q 010748 211 FMAVGSM--EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD 288 (502)
Q Consensus 211 ~la~g~~--dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~d 288 (502)
+|.++.. ++.|.|+|+.+...+..+.+ .+ |..+.|.+...+++.+.|
T Consensus 150 ~lyVan~~~~~~VsVID~~t~~vv~tI~v-------------------------~g------~~~~~P~g~~~~~~~~~D 198 (386)
T 3sjl_D 150 TLLFYQFSPAPAVGVVDLEGKAFKRMLDV-------------------------PD------CYHIFPTAPDTFFMHCRD 198 (386)
T ss_dssp EEEEEECSSSCEEEEEETTTTEEEEEEEC-------------------------CS------EEEEEEEETTEEEEEETT
T ss_pred EEEEEEcCCCCeEEEEECCCCcEEEEEEC-------------------------CC------cceeecCCCceeEEECCC
Confidence 9998864 68999999986433221110 01 112335545677788899
Q ss_pred CcEEEEeCCC-CeeeEeeccC----CCCeE-EEEEc-CCCCcEEEEEeCCCcEEEEecCCCCCcc-ceEe----------
Q 010748 289 KQVKIWDVAA-GKCNLTLEHH----TDKVQ-AVAWN-HHSPQILLSGSFDRSVVMKDARISTHSG-FKWA---------- 350 (502)
Q Consensus 289 g~v~vwd~~~-~~~~~~~~~h----~~~v~-~l~~~-~~~~~~l~s~s~dg~i~iwd~~~~~~~~-~~~~---------- 350 (502)
|++.+.++.+ ++...+...+ ..++. ...|. ++| ++++ .+.+|.|.+.|+.+..... ..+.
T Consensus 199 G~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG-~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g 276 (386)
T 3sjl_D 199 GSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG-RLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADG 276 (386)
T ss_dssp SCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT-EEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTT
T ss_pred CCEEEEECCCCCeEEEeecceeccccccccccceeEcCCC-cEEE-EeCCCEEEEEECCCCcceeecceecccccccccc
Confidence 9999999976 5553322111 12221 23554 555 4444 6668999999997664321 1111
Q ss_pred -ecCCeeEEEeCCCCCCEEEEEeC---------CCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEE
Q 010748 351 -VAADVESLAWDPHAEHSFVVSLE---------DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLL 420 (502)
Q Consensus 351 -~~~~v~~v~~~~~~~~~~~~~~~---------dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 420 (502)
.......+++++++..++++... .+.|.++|+.+. +.+..+... ..+.+|.+++++..+|
T Consensus 277 ~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~---------kv~~~i~vg-~~~~~lavs~D~~~~l 346 (386)
T 3sjl_D 277 WRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTG---------ERLAKFEMG-HEIDSINVSQDEKPLL 346 (386)
T ss_dssp EEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTC---------CEEEEEEEE-EEECEEEECSSSSCEE
T ss_pred ccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCC---------eEEEEEECC-CCcceEEECCCCCeEE
Confidence 13344567778877654444321 257999999987 556655532 3678999999984366
Q ss_pred EEE-eCCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCC
Q 010748 421 ATG-STDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSED 460 (502)
Q Consensus 421 ~t~-s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd 460 (502)
+++ ..++.|.++|..+++........+| -..|.+++|
T Consensus 347 y~tn~~~~~VsViD~~t~k~~~~i~~~~~---p~~l~~s~d 384 (386)
T 3sjl_D 347 YALSTGDKTLYIHDAESGEELRSVNQLGH---GPQVITTAD 384 (386)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEECCCCS---SCCEEEECC
T ss_pred EEEcCCCCeEEEEECCCCcEEEEecCCCC---CceeEECCc
Confidence 554 5589999999999985443333433 334455554
No 217
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.21 E-value=4.1e-09 Score=99.27 Aligned_cols=209 Identities=9% Similarity=0.050 Sum_probs=138.1
Q ss_pred cccceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCC
Q 010748 265 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH 344 (502)
Q Consensus 265 h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~ 344 (502)
+..-.-+..|+++.+.++++....+.|..||..+++. ..+. ....+.++++++++ ++++ +. ++.|.+||..++..
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG-~l~v-~~-~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSG-GYVA-TI-GTKFCALNWKEQSA 85 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTS-SEEE-EE-TTEEEEEETTTTEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCC-CEEE-EE-CCeEEEEECCCCcE
Confidence 3345568899997677888888889999999988765 3333 45689999999999 6444 44 56899999887654
Q ss_pred ccceEee----cCCeeEEEeCCCCCCEEEEEeCC---------CcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEE
Q 010748 345 SGFKWAV----AADVESLAWDPHAEHSFVVSLED---------GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTIS 411 (502)
Q Consensus 345 ~~~~~~~----~~~v~~v~~~~~~~~~~~~~~~d---------g~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 411 (502)
....... ...+..++++|++. ++++.... ..-.+|.+... ..+..+..+....+.++
T Consensus 86 ~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~---------g~~~~~~~~~~~pngi~ 155 (297)
T 3g4e_A 86 VVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPD---------HHVKKYFDQVDISNGLD 155 (297)
T ss_dssp EEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTT---------SCEEEEEEEESBEEEEE
T ss_pred EEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECC---------CCEEEEeeccccccceE
Confidence 3211111 23478899999876 44443221 22344444322 11222333344568999
Q ss_pred EcCCCCCEEEEEeCCCcEEEEEC--CCCCee---EEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccc
Q 010748 412 YNPLVPNLLATGSTDKMVKLWDL--SNNQPS---CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 412 ~sp~~~~~l~t~s~dg~i~vwd~--~~~~~~---~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~ 486 (502)
|+|++..++++.+..+.|.+|++ .++... ....+..+.+.+..++++++|. +.++....+.|.+||..+++.+.
T Consensus 156 ~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 156 WSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACYNGGRVIRLDPVTGKRLQ 234 (297)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEETTTEEEEECTTTCCEEE
T ss_pred EcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC-EEEEEcCCCEEEEEcCCCceEEE
Confidence 99998445566777889999997 444421 2223333446788999999997 57766677889999998888765
Q ss_pred ccc
Q 010748 487 NRF 489 (502)
Q Consensus 487 ~~~ 489 (502)
.+.
T Consensus 235 ~i~ 237 (297)
T 3g4e_A 235 TVK 237 (297)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 218
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.19 E-value=7.4e-10 Score=106.86 Aligned_cols=267 Identities=10% Similarity=-0.014 Sum_probs=160.8
Q ss_pred EEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec----------CCCcEEEeeCCCCCCcCcce
Q 010748 167 EVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS----------MEPAIEIWDLDVIDEVQPHV 236 (502)
Q Consensus 167 ~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~----------~dg~I~iwdl~~~~~~~~~~ 236 (502)
.|++++.... ..-+.+.+...| .+.. +|+++++.++. .++.|.+||+.+......+.
T Consensus 47 ~vsvID~~t~-----~v~~~i~vG~~P-~i~~-------spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~ 113 (368)
T 1mda_H 47 ENWVSCAGCG-----VTLGHSLGAFLS-LAVA-------GHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIE 113 (368)
T ss_dssp EEEEEETTTT-----EEEEEEEECTTC-EEEE-------CTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEE
T ss_pred eEEEEECCCC-----eEEEEEeCCCCC-ceEE-------CCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEE
Confidence 7778876654 233445555566 5544 89999999886 36889999998765544332
Q ss_pred ecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEec--CCcEEE--EeCCCCeeeEeeccCCCCe
Q 010748 237 ILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA--DKQVKI--WDVAAGKCNLTLEHHTDKV 312 (502)
Q Consensus 237 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~--dg~v~v--wd~~~~~~~~~~~~h~~~v 312 (502)
+-++ .+ .. .......++++|+++ +|+.+.. ...|.+ +|+.+ +..+.. .+.
T Consensus 114 v~~~---------------~~---~~--~g~~P~~ia~SpDGk-~lyVan~~~~~~v~V~~iD~~t---v~~i~v-~~~- 167 (368)
T 1mda_H 114 LPDA---------------PR---FS--VGPRVHIIGNCASSA-CLLFFLFGSSAAAGLSVPGASD---DQLTKS-ASC- 167 (368)
T ss_dssp ETTS---------------CS---CC--BSCCTTSEEECTTSS-CEEEEECSSSCEEEEEETTTEE---EEEEEC-SSC-
T ss_pred CCCc---------------cc---cc--cCCCcceEEEcCCCC-EEEEEccCCCCeEEEEEEchhh---ceEEEC-CCc-
Confidence 2100 00 00 012356789999955 5666553 467888 99877 444431 111
Q ss_pred EEEEEcCCCCcEEEEEeCCCcEEEEecCC-----CCCcc---ceEee-cCCeeEEEeCCCCCCEEEEEeCCCcEEEEECC
Q 010748 313 QAVAWNHHSPQILLSGSFDRSVVMKDARI-----STHSG---FKWAV-AADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 383 (502)
Q Consensus 313 ~~l~~~~~~~~~l~s~s~dg~i~iwd~~~-----~~~~~---~~~~~-~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~ 383 (502)
....|.+...+++.+.||.+.+.++.+ ++... ..+.. ..+. . .+++.. ++..+. +.|.+.|+.
T Consensus 168 --~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~-~~~vs~-~~V~viD~~ 239 (368)
T 1mda_H 168 --FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGM-LVWAVA-SSILQGDIP 239 (368)
T ss_dssp --CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTE-EEECBS-SCCEEEECC
T ss_pred --eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCE-EEEEcC-CEEEEEECC
Confidence 223456656777778889988888876 22211 01111 1222 3 444553 444444 899999986
Q ss_pred CCCCCCCCCCCccceEEec----------cCCCeeEEEEcCCCCCEEEEEe---C-----CCcEEEEECCCCCeeEEEEe
Q 010748 384 TAKSDPDSTSQQSSFTLHA----------HDKAVCTISYNPLVPNLLATGS---T-----DKMVKLWDLSNNQPSCIASR 445 (502)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~----------h~~~v~~l~~sp~~~~~l~t~s---~-----dg~i~vwd~~~~~~~~~~~~ 445 (502)
.... ..+..+.. +......+.++|++..++++.. . .+.+.++|+.+.+. +..+
T Consensus 240 ~~~~-------~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~v--v~~i 310 (368)
T 1mda_H 240 AAGA-------TMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQT--SGPI 310 (368)
T ss_dssp SSCC-------EEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCE--EECC
T ss_pred CCcc-------eEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeE--EEEE
Confidence 5310 11111100 1122223689999844444443 2 23566999999873 3333
Q ss_pred cCCCCcEEEEEEcCCCCcEEEEEe-CCCcEEEEECCCCcccccccc
Q 010748 446 NPKAGAVFSVAFSEDSPFVLAIGG-SKGKLEIWDTLSDAGISNRFS 490 (502)
Q Consensus 446 ~~~~~~v~~~~~spd~~~ll~sg~-~dg~i~vwd~~~~~~~~~~~~ 490 (502)
... .....++|+|++++++++.. .++.|.|+|+.+++.+.++-.
T Consensus 311 ~vg-~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~v 355 (368)
T 1mda_H 311 SNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVEL 355 (368)
T ss_dssp EEE-EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCC
T ss_pred ECC-CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEEC
Confidence 322 25889999999987788877 589999999999998876653
No 219
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.11 E-value=7e-08 Score=89.16 Aligned_cols=207 Identities=8% Similarity=0.065 Sum_probs=137.6
Q ss_pred cceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCcc
Q 010748 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG 346 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~ 346 (502)
..+.+++|++.++.++++-...+.|.++++..+.....+.........+++++.+..++++-...+.|.++++.......
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV 115 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence 45789999997566666767788999999876654333333335788999999764666666677899999987543222
Q ss_pred ceEee-cCCeeEEEeCCCCCCEEEEEeC--CCcEEEEECCCCCCCCCCCCCccceEE-eccCCCeeEEEEcCCCCCEEEE
Q 010748 347 FKWAV-AADVESLAWDPHAEHSFVVSLE--DGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLLAT 422 (502)
Q Consensus 347 ~~~~~-~~~v~~v~~~~~~~~~~~~~~~--dg~v~i~d~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l~t 422 (502)
.... ......++++|.+..++++... .+.|..+++... ....+ ...-.....++++|++..++++
T Consensus 116 -~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~----------~~~~~~~~~~~~P~gia~d~~~~~lyv~ 184 (267)
T 1npe_A 116 -LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT----------NRRILAQDNLGLPNGLTFDAFSSQLCWV 184 (267)
T ss_dssp -EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC----------CCEEEECTTCSCEEEEEEETTTTEEEEE
T ss_pred -EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC----------CcEEEEECCCCCCcEEEEcCCCCEEEEE
Confidence 2221 2467899999976644454433 468888887643 11222 1223457899999987456666
Q ss_pred EeCCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccc
Q 010748 423 GSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 423 ~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
-...+.|.++++.......+. .. ......++.. +.+++++....+.|.++|..+++.+....
T Consensus 185 d~~~~~I~~~~~~g~~~~~~~--~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 185 DAGTHRAECLNPAQPGRRKVL--EG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp ETTTTEEEEEETTEEEEEEEE--EC-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred ECCCCEEEEEecCCCceEEEe--cC-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEc
Confidence 667789999999765422222 22 2334567664 44567766667899999999888776654
No 220
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.09 E-value=1.7e-08 Score=95.44 Aligned_cols=223 Identities=15% Similarity=0.103 Sum_probs=137.0
Q ss_pred CCCCC-EEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEE
Q 010748 206 REKGN-FMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 284 (502)
Q Consensus 206 s~~~~-~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~s 284 (502)
+++|+ +++++..++.|..|+... . .. .+..+...+.++++.+++ +++++
T Consensus 53 ~~~g~~l~~~d~~~~~i~~~~~~g-~-~~---------------------------~~~~~~~~~~gl~~d~dG-~l~v~ 102 (305)
T 3dr2_A 53 WEAQRTLVWSDLVGRRVLGWREDG-T-VD---------------------------VLLDATAFTNGNAVDAQQ-RLVHC 102 (305)
T ss_dssp EGGGTEEEEEETTTTEEEEEETTS-C-EE---------------------------EEEESCSCEEEEEECTTS-CEEEE
T ss_pred eCCCCEEEEEECCCCEEEEEeCCC-C-EE---------------------------EEeCCCCccceeeECCCC-CEEEE
Confidence 57887 677777889999998742 1 10 111244568899999994 46655
Q ss_pred EecCCcEEEEeCCCCeeeEeeccC----CCCeEEEEEcCCCCcEEEE----EeC-------------CCcEEEEecCCCC
Q 010748 285 ASADKQVKIWDVAAGKCNLTLEHH----TDKVQAVAWNHHSPQILLS----GSF-------------DRSVVMKDARIST 343 (502)
Q Consensus 285 gs~dg~v~vwd~~~~~~~~~~~~h----~~~v~~l~~~~~~~~~l~s----~s~-------------dg~i~iwd~~~~~ 343 (502)
...++.|.+|+.. ++........ ...+..+.+.++| +++++ |.. .+.|..||..+++
T Consensus 103 ~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG-~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~ 180 (305)
T 3dr2_A 103 EHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDG-AIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSP 180 (305)
T ss_dssp ETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTS-CEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCC
T ss_pred ECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCC-CEEEeCcCCCccccccccccccccCCCeEEEEcCCCCc
Confidence 5556789999986 5533222111 2346789999999 77765 332 2567777776665
Q ss_pred CccceEeecCCeeEEEeCCCCCCEEEEEeCC------CcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCC
Q 010748 344 HSGFKWAVAADVESLAWDPHAEHSFVVSLED------GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP 417 (502)
Q Consensus 344 ~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~d------g~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~ 417 (502)
..... .......++|+|++. .++++... +.|.+|++..... ................+++.++|
T Consensus 181 ~~~~~--~~~~p~gl~~spdg~-~lyv~~~~~~~~~~~~i~~~~~~~~~l------~~~~~~~~~~~~~pdgi~~d~~G- 250 (305)
T 3dr2_A 181 LQRMA--DLDHPNGLAFSPDEQ-TLYVSQTPEQGHGSVEITAFAWRDGAL------HDRRHFASVPDGLPDGFCVDRGG- 250 (305)
T ss_dssp CEEEE--EESSEEEEEECTTSS-EEEEEECCC---CCCEEEEEEEETTEE------EEEEEEECCSSSCCCSEEECTTS-
T ss_pred EEEEe--cCCCCcceEEcCCCC-EEEEEecCCcCCCCCEEEEEEecCCCc------cCCeEEEECCCCCCCeEEECCCC-
Confidence 54432 445678899999876 45555443 7899999875410 00001111123456788999988
Q ss_pred CEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEE
Q 010748 418 NLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 478 (502)
Q Consensus 418 ~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd 478 (502)
++.+ ++.+ .|.+|+.. ++. +..+..+. .+.+++|.|++.. |..++.++ +..++
T Consensus 251 ~lwv-~~~~-gv~~~~~~-g~~--~~~~~~~~-~~~~~~f~~d~~~-L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 251 WLWS-SSGT-GVCVFDSD-GQL--LGHIPTPG-TASNCTFDQAQQR-LFITGGPC-LWMLP 303 (305)
T ss_dssp CEEE-CCSS-EEEEECTT-SCE--EEEEECSS-CCCEEEECTTSCE-EEEEETTE-EEEEE
T ss_pred CEEE-ecCC-cEEEECCC-CCE--EEEEECCC-ceeEEEEeCCCCE-EEEEcCCe-EEEEE
Confidence 6444 4444 49999985 442 33333333 4888999999885 44455543 44433
No 221
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.08 E-value=2.8e-08 Score=97.41 Aligned_cols=242 Identities=10% Similarity=0.065 Sum_probs=150.2
Q ss_pred cccccCCCceEEEEEecCC-----cceeEEEEEecCCCCCCCeeeeeccccC--------CCcceeeeecCCCCCCCCCC
Q 010748 144 DMTINPNDAVIVCARNEDD-----VSHLEVYILEESDGGDPNLYVHHHIIIP--------AFPLCMAWLDCPLKDREKGN 210 (502)
Q Consensus 144 ~~~~~p~~~~l~~~~~~~~-----~~~l~v~~~~~~~~~~~~l~~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~ 210 (502)
.+.++|+++.|.++..... ...=.|.+++.... . ....+.++ ..|..+.+ +|+|+
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~---~--vv~~I~v~g~~r~~~g~~P~~~~~-------spDGk 189 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF---L--PIADIELPDAPRFLVGTYQWMNAL-------TPDNK 189 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC---C--EEEEEEETTCCCCCBSCCGGGSEE-------CTTSS
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC---c--EEEEEECCCccccccCCCcceEEE-------cCCCC
Confidence 6899999999988864100 00116777776654 2 22233332 23444433 89999
Q ss_pred EEEEecC--CCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecC
Q 010748 211 FMAVGSM--EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD 288 (502)
Q Consensus 211 ~la~g~~--dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~d 288 (502)
+|+++.. ++.|.+.|+.+...+..+. . +. +....|.+...+++.+.|
T Consensus 190 ~lyV~n~~~~~~VsVID~~t~kvv~~I~-------------------------v-~g-----~~~~~p~g~~~~v~~~~d 238 (426)
T 3c75_H 190 NLLFYQFSPAPAVGVVDLEGKTFDRMLD-------------------------V-PD-----CYHIFPASPTVFYMNCRD 238 (426)
T ss_dssp EEEEEECSSSCEEEEEETTTTEEEEEEE-------------------------C-CS-----EEEEEEEETTEEEEEETT
T ss_pred EEEEEecCCCCeEEEEECCCCeEEEEEE-------------------------c-CC-----ceeeccCCCcEEEEEcCC
Confidence 9999874 5789999998643322111 0 11 123445545577777888
Q ss_pred CcEEEEeCCCCeeeEe----eccCCCCe-EEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCcc-ceE-----------ee
Q 010748 289 KQVKIWDVAAGKCNLT----LEHHTDKV-QAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG-FKW-----------AV 351 (502)
Q Consensus 289 g~v~vwd~~~~~~~~~----~~~h~~~v-~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~-~~~-----------~~ 351 (502)
|.+.+.++.+++.... +.....++ ..+.|.+++ ..++..+..+.|.+.|+....... ..+ ..
T Consensus 239 G~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg-~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~ 317 (426)
T 3c75_H 239 GSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRS-GRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWR 317 (426)
T ss_dssp SSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTT-CEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEE
T ss_pred CCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCC-CEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccc
Confidence 8888888866655432 21112221 235678888 455555678999999986543211 011 11
Q ss_pred cCCeeEEEeCCCCCCEEEEEe---------CCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEE
Q 010748 352 AADVESLAWDPHAEHSFVVSL---------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLAT 422 (502)
Q Consensus 352 ~~~v~~v~~~~~~~~~~~~~~---------~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t 422 (502)
......++++|++..++++.. ..+.|.++|+.+. +.+.++.... ...++.|+|++..++++
T Consensus 318 p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~---------kvv~~I~vg~-~P~gia~spDg~~~lyv 387 (426)
T 3c75_H 318 PGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETG---------ERINKIELGH-EIDSINVSQDAEPLLYA 387 (426)
T ss_dssp ECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTC---------CEEEEEEEEE-EECEEEECCSSSCEEEE
T ss_pred cCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCC---------eEEEEEECCC-CcCeEEEccCCCEEEEE
Confidence 223334688998775555433 1357999999987 5666665332 47899999998427777
Q ss_pred Ee-CCCcEEEEECCCCCe
Q 010748 423 GS-TDKMVKLWDLSNNQP 439 (502)
Q Consensus 423 ~s-~dg~i~vwd~~~~~~ 439 (502)
+. .++.|.++|+.+.+.
T Consensus 388 ~n~~s~~VsVID~~t~kv 405 (426)
T 3c75_H 388 LSAGTQTLHIYDAATGEE 405 (426)
T ss_dssp EETTTTEEEEEETTTCCE
T ss_pred EcCCCCeEEEEECCCCCE
Confidence 76 599999999999984
No 222
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.07 E-value=3.6e-08 Score=94.14 Aligned_cols=198 Identities=12% Similarity=0.096 Sum_probs=130.3
Q ss_pred eeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccce
Q 010748 269 VLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK 348 (502)
Q Consensus 269 V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 348 (502)
..+..|+|+++.++++...++.|.+||..+++.. .+. ....+.++.|++++ +++++ +.+ .|.+||..++.... .
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg-~l~v~-~~~-gl~~~d~~~g~~~~-~ 124 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDS-KQLIA-SDD-GLFLRDTATGVLTL-H 124 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETT-EEEEE-ETT-EEEEEETTTCCEEE-E
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCC-eEEEE-ECC-CEEEEECCCCcEEE-E
Confidence 4567899986777888888899999999887643 333 34679999999998 65554 444 49999987765432 1
Q ss_pred Eee-----cCCeeEEEeCCCCCCEEEEEeC------CCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCC
Q 010748 349 WAV-----AADVESLAWDPHAEHSFVVSLE------DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP 417 (502)
Q Consensus 349 ~~~-----~~~v~~v~~~~~~~~~~~~~~~------dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~ 417 (502)
... ...+..++++|++. ++++... .+.|..++ ++ .. ..+..+......++|+|++.
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~g---------~~-~~~~~~~~~~~~i~~s~dg~ 191 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--KG---------KV-TKLFADISIPNSICFSPDGT 191 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--TT---------EE-EEEEEEESSEEEEEECTTSC
T ss_pred eeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--CC---------cE-EEeeCCCcccCCeEEcCCCC
Confidence 111 13478899999875 4444332 24566666 33 21 22222334567899999983
Q ss_pred CEEEEEeCCCcEEEEECC--CC-Ce---eEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccc
Q 010748 418 NLLATGSTDKMVKLWDLS--NN-QP---SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 487 (502)
Q Consensus 418 ~~l~t~s~dg~i~vwd~~--~~-~~---~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~ 487 (502)
.++++.+.++.|.+|++. ++ .. .....+....+.+..++++++|. ++++....+.|.+|+. +++.+..
T Consensus 192 ~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~~~~v~~~d~-~g~~~~~ 265 (326)
T 2ghs_A 192 TGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDT-DGNHIAR 265 (326)
T ss_dssp EEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEETTTEEEEECT-TCCEEEE
T ss_pred EEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCC-EEEEEeCCCEEEEECC-CCCEEEE
Confidence 344555667899999985 44 31 12333333446678999999997 5665556678999998 4554433
No 223
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.05 E-value=2.7e-08 Score=93.99 Aligned_cols=225 Identities=12% Similarity=-0.024 Sum_probs=137.0
Q ss_pred ccccccccCCCceE-EEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCC
Q 010748 141 DLEDMTINPNDAVI-VCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEP 219 (502)
Q Consensus 141 ~v~~~~~~p~~~~l-~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~dg 219 (502)
..+...|+|+++.| +++...+ .|+.|+.. + .+.... .....+..+.+ +++|+++++....+
T Consensus 46 ~~egp~~~~~g~~l~~~d~~~~-----~i~~~~~~-g---~~~~~~--~~~~~~~gl~~-------d~dG~l~v~~~~~~ 107 (305)
T 3dr2_A 46 WSEGPAWWEAQRTLVWSDLVGR-----RVLGWRED-G---TVDVLL--DATAFTNGNAV-------DAQQRLVHCEHGRR 107 (305)
T ss_dssp SEEEEEEEGGGTEEEEEETTTT-----EEEEEETT-S---CEEEEE--ESCSCEEEEEE-------CTTSCEEEEETTTT
T ss_pred CccCCeEeCCCCEEEEEECCCC-----EEEEEeCC-C---CEEEEe--CCCCccceeeE-------CCCCCEEEEECCCC
Confidence 45678999999944 4444444 67777653 2 222111 12344556665 78899777766668
Q ss_pred cEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccC-cccceeeEEeccCCCcEEEE----Eec-------
Q 010748 220 AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGS-HTDSVLGLAWNKEFRNILAS----ASA------- 287 (502)
Q Consensus 220 ~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~l~~~~~~~~~l~s----gs~------- 287 (502)
.|.+|+.+ +. ... +. ....+ ....+.++++.+++ .++++ |..
T Consensus 108 ~v~~~~~~-g~-~~~---~~--------------------~~~~~~~~~~~~~i~~d~dG-~l~~td~~~g~~~~~~~~~ 161 (305)
T 3dr2_A 108 AITRSDAD-GQ-AHL---LV--------------------GRYAGKRLNSPNDLIVARDG-AIWFTDPPFGLRKPSQGCP 161 (305)
T ss_dssp EEEEECTT-SC-EEE---EE--------------------CEETTEECSCCCCEEECTTS-CEEEECCSGGGSCGGGSCC
T ss_pred EEEEECCC-CC-EEE---EE--------------------eccCCCccCCCCCEEECCCC-CEEEeCcCCCccccccccc
Confidence 89999875 21 110 00 00001 12457789999995 46665 332
Q ss_pred ------CCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCC------CcEEEEecCCCCCccc-eE--eec
Q 010748 288 ------DKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD------RSVVMKDARISTHSGF-KW--AVA 352 (502)
Q Consensus 288 ------dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~d------g~i~iwd~~~~~~~~~-~~--~~~ 352 (502)
.+.|..||..+++..... .......++|+|++ +.|+.+... +.|.+|++........ .+ ...
T Consensus 162 ~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg-~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~ 238 (305)
T 3dr2_A 162 ADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDE-QTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPD 238 (305)
T ss_dssp CCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTS-SEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSS
T ss_pred cccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCC-CEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCC
Confidence 256888887677654433 34567889999999 666666554 7899999875431110 01 012
Q ss_pred CCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCC
Q 010748 353 ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK 427 (502)
Q Consensus 353 ~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg 427 (502)
..+..+++++++. +.+++.+ .|.+|+... ..+..+..+. .+.+++|+|++ +.|+.++.++
T Consensus 239 ~~pdgi~~d~~G~--lwv~~~~-gv~~~~~~g----------~~~~~~~~~~-~~~~~~f~~d~-~~L~it~~~~ 298 (305)
T 3dr2_A 239 GLPDGFCVDRGGW--LWSSSGT-GVCVFDSDG----------QLLGHIPTPG-TASNCTFDQAQ-QRLFITGGPC 298 (305)
T ss_dssp SCCCSEEECTTSC--EEECCSS-EEEEECTTS----------CEEEEEECSS-CCCEEEECTTS-CEEEEEETTE
T ss_pred CCCCeEEECCCCC--EEEecCC-cEEEECCCC----------CEEEEEECCC-ceeEEEEeCCC-CEEEEEcCCe
Confidence 3456788998765 5555544 499999842 4455555444 58899999887 6666666654
No 224
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.03 E-value=2e-07 Score=90.50 Aligned_cols=234 Identities=18% Similarity=0.099 Sum_probs=138.9
Q ss_pred CCCCEEEE-ecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccc-cCcccceeeEEeccCCCcEEEE
Q 010748 207 EKGNFMAV-GSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKK-GSHTDSVLGLAWNKEFRNILAS 284 (502)
Q Consensus 207 ~~~~~la~-g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~V~~l~~~~~~~~~l~s 284 (502)
+++++|++ |..++.|.|+|+.+.... +... +........ ......-..+...|++ ++++
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~-p~~~----------------k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs 153 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPRE-PKII----------------KVIEPEEVKKVSGYSRLHTVHCGPDA--IYIS 153 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTS-CEEE----------------EEECHHHHHHHHCEEEEEEEEECSSC--EEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCC-ceee----------------eeechhhcccccCCCcccceeECCCe--EEEE
Confidence 77777665 557789999998643211 1000 000000000 0011134556778984 6667
Q ss_pred EecC------CcEEEEeCCCCeeeEeeccCC---CCeEEEEEcCCCCcEEEEEe-------------------CCCcEEE
Q 010748 285 ASAD------KQVKIWDVAAGKCNLTLEHHT---DKVQAVAWNHHSPQILLSGS-------------------FDRSVVM 336 (502)
Q Consensus 285 gs~d------g~v~vwd~~~~~~~~~~~~h~---~~v~~l~~~~~~~~~l~s~s-------------------~dg~i~i 336 (502)
+..+ |.|.++|..+.+.+.++.... ..-..+.|+|++ +.++++. ...+|.+
T Consensus 154 ~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~-~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v 232 (462)
T 2ece_A 154 ALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPN-EVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHF 232 (462)
T ss_dssp EEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTT-TEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEE
T ss_pred cCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCC-CEEEEccCcCccccccccchhhhhhccCCEEEE
Confidence 6665 789999999999999886322 223458889999 7777774 4789999
Q ss_pred EecCCCCCccceEeec---CCeeEEEe--CCCCCCEEEEEe-----CCCcEEEEECCCCCCCCCCCCCccceEE--ec--
Q 010748 337 KDARISTHSGFKWAVA---ADVESLAW--DPHAEHSFVVSL-----EDGTIKGFDIRTAKSDPDSTSQQSSFTL--HA-- 402 (502)
Q Consensus 337 wd~~~~~~~~~~~~~~---~~v~~v~~--~~~~~~~~~~~~-----~dg~v~i~d~~~~~~~~~~~~~~~~~~~--~~-- 402 (502)
||+.+.+... ..... .....+.| +|++...++++- .+++|.+|....+. ......+ ..
T Consensus 233 ~D~~~~k~~~-tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~-------~~~~~vIdi~~~~ 304 (462)
T 2ece_A 233 WDLRKRKRIH-SLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK-------WNAEKVIEIPAEP 304 (462)
T ss_dssp EETTTTEEEE-EEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE-------EEEEEEEEECCEE
T ss_pred EECCCCcEee-EEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc-------eeEEEEEeCCCcc
Confidence 9999764333 23332 23445545 998875555555 67788776654321 0111111 10
Q ss_pred --------------cCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCC-CCeeEEEEecCC--------------CCcEE
Q 010748 403 --------------HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN-NQPSCIASRNPK--------------AGAVF 453 (502)
Q Consensus 403 --------------h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~-~~~~~~~~~~~~--------------~~~v~ 453 (502)
-......|.++|++..+.++.-..+.|.+||+.. .++..+...... .+.-.
T Consensus 305 v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr 384 (462)
T 2ece_A 305 LEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQ 384 (462)
T ss_dssp CCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCC
T ss_pred ccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCC
Confidence 0245788999999944444445578999999863 333344333221 01357
Q ss_pred EEEEcCCCCcEEEEE
Q 010748 454 SVAFSEDSPFVLAIG 468 (502)
Q Consensus 454 ~~~~spd~~~ll~sg 468 (502)
.++++|||++++++.
T Consensus 385 ~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 385 MLEISRDGRRVYVTN 399 (462)
T ss_dssp CEEECTTSSEEEEEC
T ss_pred EEEEcCCCCEEEEEc
Confidence 899999999755544
No 225
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.00 E-value=5.2e-11 Score=116.04 Aligned_cols=185 Identities=16% Similarity=0.109 Sum_probs=103.7
Q ss_pred CcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccce-EeecCCee-
Q 010748 279 RNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK-WAVAADVE- 356 (502)
Q Consensus 279 ~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~v~- 356 (502)
+.++++++.||.|+.||..+|+.+.++.. +.+.+..+..++ .++++++.||.|+.||..+++..... ......+.
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g-~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEE-PAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCC-CEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 34899999999999999999999988875 455555555666 67777889999999999877653211 11111110
Q ss_pred EEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCC
Q 010748 357 SLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN 436 (502)
Q Consensus 357 ~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~ 436 (502)
+..+. .+ ..+++++.++.|+.||..++ +.++.+..+. ...++|.+ ..+++++.++.|+.||..+
T Consensus 86 sp~~~-~~-~~v~~g~~dg~v~a~D~~tG---------~~~w~~~~~~----~~~~~p~~-~~v~~~~~dg~v~a~d~~t 149 (369)
T 2hz6_A 86 SPCRS-SD-GILYMGKKQDIWYVIDLLTG---------EKQQTLSSAF----ADSLSPST-SLLYLGRTEYTITMYDTKT 149 (369)
T ss_dssp CSCC-------CCCCEEEEEEEEECCC------------------------------------EEEEEEEEEEECCCSSS
T ss_pred CceEe-cC-CEEEEEeCCCEEEEEECCCC---------cEEEEecCCC----cccccccC-CEEEEEecCCEEEEEECCC
Confidence 00111 22 35778888999999999987 4555555443 23456655 7888899999999999998
Q ss_pred CCeeEEEEecCCCCcEEEEEEcCCC---CcEEEEEeCCCcEEEEECCCCccccc
Q 010748 437 NQPSCIASRNPKAGAVFSVAFSEDS---PFVLAIGGSKGKLEIWDTLSDAGISN 487 (502)
Q Consensus 437 ~~~~~~~~~~~~~~~v~~~~~spd~---~~ll~sg~~dg~i~vwd~~~~~~~~~ 487 (502)
++..-...... .....+.++. . .+++++.+|.|+.||..+++.+.+
T Consensus 150 G~~~W~~~~~~----~~~~~~~~~~~~~~-~v~~~~~dg~v~a~d~~tG~~~W~ 198 (369)
T 2hz6_A 150 RELRWNATYFD----YAASLPEDDVDYKM-SHFVSNGDGLVVTVDSESGDVLWI 198 (369)
T ss_dssp SSCCCEEEEEE----ECCBCCCCCTTCCC-CEEEEETSCEEEEECTTTCCEEEE
T ss_pred CCEEEeEeccc----ccCccccCCccccc-eEEEECCCCEEEEEECCCCcEEEE
Confidence 87432222211 1223334431 3 366688899999999999887644
No 226
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.98 E-value=3.3e-08 Score=104.14 Aligned_cols=243 Identities=12% Similarity=0.048 Sum_probs=145.8
Q ss_pred CCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEe-
Q 010748 208 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS- 286 (502)
Q Consensus 208 ~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs- 286 (502)
.+..|++++.++.|..+|..+++.+....... ... ........++ +. + + .++.++
T Consensus 120 ~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~---------------~~~--~~~~~~~sP~----v~-~-g-~v~vg~~ 175 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRA---------------DHK--RSYTITGAPR----VV-N-G-KVVIGNG 175 (689)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCS---------------CTT--SCCBCCSCCE----EE-T-T-EEEECCB
T ss_pred ECCEEEEEccCCEEEEEECCCCCEeeeecCcC---------------CCC--CCccccCCcE----EE-C-C-EEEEEeC
Confidence 46788899999999999998876554321100 000 0000011111 11 2 3 444443
Q ss_pred -----cCCcEEEEeCCCCeeeEeeccCC-------------------------------CCeEEEEEcCCCCcEEEEEeC
Q 010748 287 -----ADKQVKIWDVAAGKCNLTLEHHT-------------------------------DKVQAVAWNHHSPQILLSGSF 330 (502)
Q Consensus 287 -----~dg~v~vwd~~~~~~~~~~~~h~-------------------------------~~v~~l~~~~~~~~~l~s~s~ 330 (502)
.+|.|..||..+|+.+.++.... .....+.+.|.. .+++.++.
T Consensus 176 ~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~-~~vy~~~~ 254 (689)
T 1yiq_A 176 GAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPEL-NLLYIGVG 254 (689)
T ss_dssp CTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTT-TEEEEECC
T ss_pred CCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCC-CEEEEeCC
Confidence 36899999999999887764210 011257788877 67888887
Q ss_pred CCc-------------------EEEEecCCCCCccceEee---------cCCeeEEEeCCCCC--CEEEEEeCCCcEEEE
Q 010748 331 DRS-------------------VVMKDARISTHSGFKWAV---------AADVESLAWDPHAE--HSFVVSLEDGTIKGF 380 (502)
Q Consensus 331 dg~-------------------i~iwd~~~~~~~~~~~~~---------~~~v~~v~~~~~~~--~~~~~~~~dg~v~i~ 380 (502)
++. |..+|.++++..-..... ...+.......++. ..++.++.+|.++++
T Consensus 255 ~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~l 334 (689)
T 1yiq_A 255 NGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVI 334 (689)
T ss_dssp CEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEE
T ss_pred CCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEE
Confidence 764 999999988754322211 11111111111221 268888999999999
Q ss_pred ECCCCCCCCCCCCCccceEEecc----------------------------C-----------CCeeEEEEcCCCCCEEE
Q 010748 381 DIRTAKSDPDSTSQQSSFTLHAH----------------------------D-----------KAVCTISYNPLVPNLLA 421 (502)
Q Consensus 381 d~~~~~~~~~~~~~~~~~~~~~h----------------------------~-----------~~v~~l~~sp~~~~~l~ 421 (502)
|.++++. +...... . ..-..++|+|.. .+++
T Consensus 335 D~~tG~~---------l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~-~~~y 404 (689)
T 1yiq_A 335 DRATGEL---------LSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDT-GLVY 404 (689)
T ss_dssp ETTTCCE---------EEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTT-TEEE
T ss_pred ECCCCCE---------eccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCC-CEEE
Confidence 9998742 2111100 0 011237888876 6666
Q ss_pred EEeC---------------------------------------------CCcEEEEECCCCCeeEEEEecCCCCcEEEEE
Q 010748 422 TGST---------------------------------------------DKMVKLWDLSNNQPSCIASRNPKAGAVFSVA 456 (502)
Q Consensus 422 t~s~---------------------------------------------dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~ 456 (502)
+.+. +|.|+.||+.+++. +.....+ .++....
T Consensus 405 v~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~--~W~~~~~-~~~~~g~ 481 (689)
T 1yiq_A 405 IPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQA--AWEVPYV-TIFNGGT 481 (689)
T ss_dssp EEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEE--EEEEEES-SSCCCCE
T ss_pred EeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCe--EeEccCC-CCccCcc
Confidence 6532 37799999999984 3333322 2233334
Q ss_pred EcCCCCcEEEEEeCCCcEEEEECCCCccccccc
Q 010748 457 FSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 457 ~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
+...+. ++++|+.||.|+.||..+++.+.+.-
T Consensus 482 ~~tagg-lvf~gt~dg~l~a~D~~tG~~lw~~~ 513 (689)
T 1yiq_A 482 LSTAGN-LVFEGSADGRVIAYAADTGEKLWEQP 513 (689)
T ss_dssp EEETTT-EEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ceECCC-EEEEECCCCcEEEEECCCCccceeee
Confidence 555565 68889999999999999999986543
No 227
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.98 E-value=2.1e-10 Score=111.74 Aligned_cols=203 Identities=13% Similarity=0.064 Sum_probs=110.0
Q ss_pred CCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEec
Q 010748 208 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA 287 (502)
Q Consensus 208 ~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~ 287 (502)
++.+|++|+.+|.|+.||..+++.+.... . ..+.+..+..+ +.++++++.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~---------------------------~--~~~~s~p~~~~-g~~~v~~s~ 57 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLK---------------------------E--DPVLQVPTHVE-EPAFLPDPN 57 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEE---------------------------C--CCSCCCC------CCEEECTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEec---------------------------C--CCceecceEcC-CCEEEEeCC
Confidence 58899999999999999998765433211 1 23444444455 447777889
Q ss_pred CCcEEEEeCCCCeeeEeeccCCCC-eE-EEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCC
Q 010748 288 DKQVKIWDVAAGKCNLTLEHHTDK-VQ-AVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAE 365 (502)
Q Consensus 288 dg~v~vwd~~~~~~~~~~~~h~~~-v~-~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~ 365 (502)
||.|+.||..+|+.+..+..+... +. +..+. .+ ..+++++.++.|+.||.++++..-..... . ...++|.+
T Consensus 58 dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~-~~v~~g~~dg~v~a~D~~tG~~~w~~~~~-~---~~~~~p~~- 130 (369)
T 2hz6_A 58 DGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SD-GILYMGKKQDIWYVIDLLTGEKQQTLSSA-F---ADSLSPST- 130 (369)
T ss_dssp TCCEEEC-----CCSEECSCCHHHHHTTCSCC-------CCCCEEEEEEEEECCC-------------------------
T ss_pred CCEEEEEECCCCceeeeeeccCccccccCceEe-cC-CEEEEEeCCCEEEEEECCCCcEEEEecCC-C---cccccccC-
Confidence 999999999999887666533211 10 00111 23 46788888999999999988764322221 1 23455644
Q ss_pred CEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCC--CCEEEEEeCCCcEEEEECCCCCeeEEE
Q 010748 366 HSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLV--PNLLATGSTDKMVKLWDLSNNQPSCIA 443 (502)
Q Consensus 366 ~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~--~~~l~t~s~dg~i~vwd~~~~~~~~~~ 443 (502)
..+++++.++.|+.||.+++ ..++.+..+. .....+.++. ...+++++.+|.|+.||..+++. +.
T Consensus 131 ~~v~~~~~dg~v~a~d~~tG---------~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~--~W 197 (369)
T 2hz6_A 131 SLLYLGRTEYTITMYDTKTR---------ELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDV--LW 197 (369)
T ss_dssp --EEEEEEEEEEECCCSSSS---------SCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCE--EE
T ss_pred CEEEEEecCCEEEEEECCCC---------CEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcE--EE
Confidence 47888888999999999987 4445443221 1223333321 14567788999999999999883 44
Q ss_pred EecCCCCcEEE-EEEcCCC
Q 010748 444 SRNPKAGAVFS-VAFSEDS 461 (502)
Q Consensus 444 ~~~~~~~~v~~-~~~spd~ 461 (502)
.... ..++.. ..+++++
T Consensus 198 ~~~~-~~pv~~~~~~~~dg 215 (369)
T 2hz6_A 198 IQNY-ASPVVAFYVWQREG 215 (369)
T ss_dssp EEEC-SSCEEEEEECTTSS
T ss_pred EecC-CCceEEEEEecCCc
Confidence 4432 344443 4455565
No 228
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.97 E-value=8.6e-08 Score=100.74 Aligned_cols=244 Identities=11% Similarity=0.067 Sum_probs=150.2
Q ss_pred CCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceee-EEeccCCCcEEEEEe
Q 010748 208 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLG-LAWNKEFRNILASAS 286 (502)
Q Consensus 208 ~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~-l~~~~~~~~~l~sgs 286 (502)
.+..|++++.++.|..+|..+++.+....... .. .....+.+ .... + + .++.++
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~---------------~~-------~~~~~~~~~p~v~-~-~-~v~v~~ 181 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFE---------------GQ-------KGSLTITGAPRVF-K-G-KVIIGN 181 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTT---------------TC-------CSSCBCCSCCEEE-T-T-EEEECC
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCc---------------Cc-------CcCcccccCcEEE-C-C-EEEEEe
Confidence 46788889999999999998876544321100 00 00001111 1111 2 3 455554
Q ss_pred c------CCcEEEEeCCCCeeeEeeccCCCC--------------------------------eEEEEEcCCCCcEEEEE
Q 010748 287 A------DKQVKIWDVAAGKCNLTLEHHTDK--------------------------------VQAVAWNHHSPQILLSG 328 (502)
Q Consensus 287 ~------dg~v~vwd~~~~~~~~~~~~h~~~--------------------------------v~~l~~~~~~~~~l~s~ 328 (502)
. ++.|+.||..+|+.+.++...... ...+.+.|.+ .+++.+
T Consensus 182 ~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~-~~vy~~ 260 (677)
T 1kb0_A 182 GGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAEL-NTMYVG 260 (677)
T ss_dssp BCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTT-TEEEEE
T ss_pred cccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCC-CEEEEE
Confidence 3 689999999999998877532211 1356788887 677777
Q ss_pred eCCC-------------------cEEEEecCCCCCccceEee---------cCCeeEEEeCCCCC--CEEEEEeCCCcEE
Q 010748 329 SFDR-------------------SVVMKDARISTHSGFKWAV---------AADVESLAWDPHAE--HSFVVSLEDGTIK 378 (502)
Q Consensus 329 s~dg-------------------~i~iwd~~~~~~~~~~~~~---------~~~v~~v~~~~~~~--~~~~~~~~dg~v~ 378 (502)
+.++ .|..+|.++++..-..... ......+....++. ..+++++.+|.|+
T Consensus 261 ~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~ 340 (677)
T 1kb0_A 261 TGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFF 340 (677)
T ss_dssp CCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEE
T ss_pred CCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEE
Confidence 7664 4899999887754322111 11122222222342 4788899999999
Q ss_pred EEECCCCCCCCCCCCCccceEEeccC-----------CC------------------------eeEEEEcCCCCCEEEEE
Q 010748 379 GFDIRTAKSDPDSTSQQSSFTLHAHD-----------KA------------------------VCTISYNPLVPNLLATG 423 (502)
Q Consensus 379 i~d~~~~~~~~~~~~~~~~~~~~~h~-----------~~------------------------v~~l~~sp~~~~~l~t~ 423 (502)
++|..++ +.++...... .+ -..++|+|+. .++++.
T Consensus 341 ~lD~~tG---------~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~-~~~yv~ 410 (677)
T 1kb0_A 341 VLDRTNG---------KFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQT-GLVYLP 410 (677)
T ss_dssp EEETTTC---------CEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTT-TEEEEE
T ss_pred EEECCCC---------CEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCC-CEEEEe
Confidence 9999987 3343332110 00 0257888887 666665
Q ss_pred eC-------------------------------------------CCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCC
Q 010748 424 ST-------------------------------------------DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSED 460 (502)
Q Consensus 424 s~-------------------------------------------dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd 460 (502)
.. .|.|..||+.+++. +.... +..++....+...
T Consensus 411 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~--~W~~~-~~~~~~~g~~~~~ 487 (677)
T 1kb0_A 411 AQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKA--AWSVE-HVSPWNGGTLTTA 487 (677)
T ss_dssp EEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEE--EEEEE-ESSSCCCCEEEET
T ss_pred ChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcE--EeecC-CCCCCcCcceEeC
Confidence 33 27799999999873 33332 2233444456666
Q ss_pred CCcEEEEEeCCCcEEEEECCCCccccccccC
Q 010748 461 SPFVLAIGGSKGKLEIWDTLSDAGISNRFSK 491 (502)
Q Consensus 461 ~~~ll~sg~~dg~i~vwd~~~~~~~~~~~~~ 491 (502)
+. ++++++.+|.+++||+.+++.+.+....
T Consensus 488 g~-~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 517 (677)
T 1kb0_A 488 GN-VVFQGTADGRLVAYHAATGEKLWEAPTG 517 (677)
T ss_dssp TT-EEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CC-EEEEECCCCcEEEEECCCCceeeeeeCC
Confidence 66 5777899999999999999998765533
No 229
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.97 E-value=1.6e-08 Score=101.52 Aligned_cols=247 Identities=11% Similarity=0.094 Sum_probs=158.8
Q ss_pred CCCCEEEEecC-CCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEe-c-cCCCcEEE
Q 010748 207 EKGNFMAVGSM-EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAW-N-KEFRNILA 283 (502)
Q Consensus 207 ~~~~~la~g~~-dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~-~-~~~~~~l~ 283 (502)
+||++|.+... ++.|.+.|+++.+...-+.+ ........+++ . |+++ +++
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~i--------------------------p~g~~phg~~~~~~p~~~-~v~ 151 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEI--------------------------PNAKGIHGLRPQKWPRSN-YVF 151 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEEC--------------------------SSCCSEEEEEECCSSBCS-EEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeC--------------------------CCCCCCcceeeeecCCCc-EEE
Confidence 47888877665 46799999987554331110 11234667777 4 7855 555
Q ss_pred EEe------------------cCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCC-------------
Q 010748 284 SAS------------------ADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDR------------- 332 (502)
Q Consensus 284 sgs------------------~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg------------- 332 (502)
+++ .++.|.+.|..+.+.+.++.--. ....++++|++ .++++.+.+.
T Consensus 152 ~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdG-k~~~vt~~~se~~~~i~~~~~~~ 229 (595)
T 1fwx_A 152 CNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEG-KWAFSTSYNSEKGMTLPEMTAAE 229 (595)
T ss_dssp EEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSS-SEEEEEESCTTCCSSHHHHTCCS
T ss_pred EecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCC-CEEEEEecCcccCcchhhccccc
Confidence 553 35689999999999888886322 45677899998 6676666543
Q ss_pred -------------------------cEEEEecCC--CCCccceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCC
Q 010748 333 -------------------------SVVMKDARI--STHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTA 385 (502)
Q Consensus 333 -------------------------~i~iwd~~~--~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~ 385 (502)
.|.+.|.++ .+.............++.++|+|..+++++..+..|.++|+.+.
T Consensus 230 ~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~ 309 (595)
T 1fwx_A 230 MDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRF 309 (595)
T ss_dssp EEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGH
T ss_pred cceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECccc
Confidence 477777776 33323345566778899999999877777788999999999854
Q ss_pred CCC--CCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCC--------CeeEEEEecCCCCcE-E-
Q 010748 386 KSD--PDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNN--------QPSCIASRNPKAGAV-F- 453 (502)
Q Consensus 386 ~~~--~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~--------~~~~~~~~~~~~~~v-~- 453 (502)
... ........+.....-......++|+|+| ...++.-.|++|.+||+... ....+..+..|..+- .
T Consensus 310 ~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~ 388 (595)
T 1fwx_A 310 DAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLK 388 (595)
T ss_dssp HHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEE
T ss_pred ccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccce
Confidence 100 0000001121112223457889999998 77777888999999998761 112445555554332 1
Q ss_pred ---EEEEcCCCCcEEEEEeCC-CcE-----------EEEECCCCc
Q 010748 454 ---SVAFSEDSPFVLAIGGSK-GKL-----------EIWDTLSDA 483 (502)
Q Consensus 454 ---~~~~spd~~~ll~sg~~d-g~i-----------~vwd~~~~~ 483 (502)
.+.++|||+|++++.... .++ .++|+..++
T Consensus 389 ~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 389 TVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp ETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred eccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCc
Confidence 224589999866554333 344 899996554
No 230
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.93 E-value=1.4e-06 Score=80.33 Aligned_cols=216 Identities=10% Similarity=0.023 Sum_probs=130.9
Q ss_pred CCC-CCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEE
Q 010748 206 REK-GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 284 (502)
Q Consensus 206 s~~-~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~s 284 (502)
+++ +.++++-...+.|.+++++.... . . ..........+|++.+.++.++++
T Consensus 44 d~~~~~ly~~d~~~~~I~~~~~~g~~~-~--~------------------------~~~~~~~~p~~ia~d~~~~~lyv~ 96 (267)
T 1npe_A 44 DCVDKVVYWTDISEPSIGRASLHGGEP-T--T------------------------IIRQDLGSPEGIALDHLGRTIFWT 96 (267)
T ss_dssp ETTTTEEEEEETTTTEEEEEESSSCCC-E--E------------------------EECTTCCCEEEEEEETTTTEEEEE
T ss_pred ecCCCEEEEEECCCCEEEEEecCCCCc-E--E------------------------EEECCCCCccEEEEEecCCeEEEE
Confidence 565 44555555678999999864211 0 0 001112457889999875666666
Q ss_pred EecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeC--CCcEEEEecCCCCCccceEeecCCeeEEEeCC
Q 010748 285 ASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSF--DRSVVMKDARISTHSGFKWAVAADVESLAWDP 362 (502)
Q Consensus 285 gs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~ 362 (502)
-...+.|.++++........+.........++++|++..++++... .+.|..+++..................+++++
T Consensus 97 d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~ 176 (267)
T 1npe_A 97 DSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDA 176 (267)
T ss_dssp ETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEET
T ss_pred ECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcC
Confidence 6677899999986443222222222567899999976355555433 46888888765332211111224578899999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEE
Q 010748 363 HAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCI 442 (502)
Q Consensus 363 ~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~ 442 (502)
++..++++-...+.|..+++... .....+. .......+++. +..++++....+.|.++|..+++. +
T Consensus 177 ~~~~lyv~d~~~~~I~~~~~~g~---------~~~~~~~-~~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~--~ 242 (267)
T 1npe_A 177 FSSQLCWVDAGTHRAECLNPAQP---------GRRKVLE-GLQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKE--M 242 (267)
T ss_dssp TTTEEEEEETTTTEEEEEETTEE---------EEEEEEE-CCCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEE--E
T ss_pred CCCEEEEEECCCCEEEEEecCCC---------ceEEEec-CCCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCc--e
Confidence 87766667777889999998753 2112222 22334566654 335666655678999999988773 3
Q ss_pred EEecCCC-CcEEEEEEcCCCC
Q 010748 443 ASRNPKA-GAVFSVAFSEDSP 462 (502)
Q Consensus 443 ~~~~~~~-~~v~~~~~spd~~ 462 (502)
..+.... .....+++.|++.
T Consensus 243 ~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 243 DTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEECCSSCCCCCCEEEECSCC
T ss_pred EEEccccccccceeeecCccC
Confidence 3433222 2356777877764
No 231
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.90 E-value=3.9e-08 Score=94.80 Aligned_cols=251 Identities=10% Similarity=-0.027 Sum_probs=150.5
Q ss_pred cccccCCCceEEEEEecC-----CcceeEEEEEecCCCCCCCeeeeeccccC--------CCcceeeeecCCCCCCCCCC
Q 010748 144 DMTINPNDAVIVCARNED-----DVSHLEVYILEESDGGDPNLYVHHHIIIP--------AFPLCMAWLDCPLKDREKGN 210 (502)
Q Consensus 144 ~~~~~p~~~~l~~~~~~~-----~~~~l~v~~~~~~~~~~~~l~~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~ 210 (502)
.+.++|+++.|.++.... .-..=.|.+++.... . ....+.++ ..|..+.. +|+|+
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~---~--vv~~I~v~~~~~~~~g~~P~~ia~-------SpDGk 136 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF---L--PIADIELPDAPRFSVGPRVHIIGN-------CASSA 136 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC---C--EEEEEEETTSCSCCBSCCTTSEEE-------CTTSS
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC---C--EEEEEECCCccccccCCCcceEEE-------cCCCC
Confidence 689999999998887310 000116777776654 2 22333333 23555544 89999
Q ss_pred EEEEecC--CCcEEE--eeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEe
Q 010748 211 FMAVGSM--EPAIEI--WDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS 286 (502)
Q Consensus 211 ~la~g~~--dg~I~i--wdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs 286 (502)
+|+++.. ...|.+ +|+.+ +.... . +. |+.+.|++...+++.+
T Consensus 137 ~lyVan~~~~~~v~V~~iD~~t---v~~i~-------------------------v-~~-----~~~~~p~g~~~~~~~~ 182 (368)
T 1mda_H 137 CLLFFLFGSSAAAGLSVPGASD---DQLTK-------------------------S-AS-----CFHIHPGAAATHYLGS 182 (368)
T ss_dssp CEEEEECSSSCEEEEEETTTEE---EEEEE-------------------------C-SS-----CCCCEEEETTEEECCC
T ss_pred EEEEEccCCCCeEEEEEEchhh---ceEEE-------------------------C-CC-----ceEEccCCCeEEEEEc
Confidence 9999875 357888 88864 11000 0 11 1223456566777778
Q ss_pred cCCcEEEEeCCC-----CeeeEe----eccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCcc-ceEe------
Q 010748 287 ADKQVKIWDVAA-----GKCNLT----LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG-FKWA------ 350 (502)
Q Consensus 287 ~dg~v~vwd~~~-----~~~~~~----~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~-~~~~------ 350 (502)
.||.+.+.++.+ ++.+.. +.-...+. . .+.+ ..++..+. +.|.+.|+.+..... ..+.
T Consensus 183 ~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~-~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~ 256 (368)
T 1mda_H 183 CPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYP-GMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGR 256 (368)
T ss_dssp CTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTT-TEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHH
T ss_pred CCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccC-CEEEEEcC-CEEEEEECCCCcceEEEEEEeccccc
Confidence 899998899887 443321 11122333 3 5555 34444555 999999986533111 0111
Q ss_pred -----ecCCeeEEEeCCCCCCEEEEEe---C-----CCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCC
Q 010748 351 -----VAADVESLAWDPHAEHSFVVSL---E-----DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP 417 (502)
Q Consensus 351 -----~~~~v~~v~~~~~~~~~~~~~~---~-----dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~ 417 (502)
.......++++|++..++++.. . .+.+.++|+.+. +.+..+.... ...+++|+|++.
T Consensus 257 ~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~---------~vv~~i~vg~-~p~gi~~s~Dg~ 326 (368)
T 1mda_H 257 KADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG---------QTSGPISNGH-DSDAIIAAQDGA 326 (368)
T ss_dssp HHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC---------CEEECCEEEE-EECEEEECCSSS
T ss_pred cccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCC---------eEEEEEECCC-CcceEEECCCCC
Confidence 1222233789998875554443 2 235669999987 4455554333 588999999986
Q ss_pred CEEEEEe-CCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcC
Q 010748 418 NLLATGS-TDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSE 459 (502)
Q Consensus 418 ~~l~t~s-~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~sp 459 (502)
.++++.. .++.|.++|+.+.+ .+..+... .....+++.+
T Consensus 327 ~l~va~~~~~~~VsVID~~t~k--vv~~I~vg-~~P~~i~~~~ 366 (368)
T 1mda_H 327 SDNYANSAGTEVLDIYDAASDQ--DQSSVELD-KGPESLSVQN 366 (368)
T ss_dssp CEEEEEETTTTEEEEEESSSCE--EEEECCCC-SCCCEEECCC
T ss_pred EEEEEccCCCCeEEEEECCCCc--EEEEEECC-CCCCEEEeec
Confidence 6788888 69999999999987 45555433 2344555543
No 232
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.89 E-value=4e-06 Score=79.38 Aligned_cols=211 Identities=12% Similarity=0.078 Sum_probs=136.0
Q ss_pred cceeeEEeccCCCcEEEEEecCCcEEEEeCCC----CeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCC
Q 010748 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAA----GKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS 342 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~----~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~ 342 (502)
..+.+++|.+.++.++.+-...+.|..+++.. ......+...-.....+++.+.+.+++++-...+.|.++++...
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 45789999987566666667778999999876 22222233223456788998766466666677889999998754
Q ss_pred CCccceEeecCCeeEEEeCCCCCCEEEEEeCC-CcEEEEECCCCCCCCCCCCCccceEE-eccCCCeeEEEEcCCCCCEE
Q 010748 343 THSGFKWAVAADVESLAWDPHAEHSFVVSLED-GTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLL 420 (502)
Q Consensus 343 ~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~d-g~v~i~d~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l 420 (502)
...............++++|.+..++++.... +.|..+++... ....+ ...-.....++++|.+..+.
T Consensus 110 ~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~----------~~~~~~~~~~~~P~gla~d~~~~~lY 179 (316)
T 1ijq_A 110 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV----------DIYSLVTENIQWPNGITLDLLSGRLY 179 (316)
T ss_dssp SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC----------CEEEEECSSCSCEEEEEEETTTTEEE
T ss_pred ceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC----------CeEEEEECCCCCceEEEEeccCCEEE
Confidence 33222222235678999998766555555443 78888887532 22222 22334678999998774666
Q ss_pred EEEeCCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccc
Q 010748 421 ATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 421 ~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
++-+..+.|..+|+.......+............+++.. + +++.+-...+.|..++..+++.+..+.
T Consensus 180 ~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~-~-~ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 180 WVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-D-KVFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp EEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-T-EEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred EEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEEC-C-EEEEEECCCCeEEEEeCCCCcceEEEe
Confidence 666667899999998654333333322334567888853 3 467777778899999987777655443
No 233
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.88 E-value=1e-06 Score=85.70 Aligned_cols=223 Identities=8% Similarity=0.049 Sum_probs=133.0
Q ss_pred CCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecC
Q 010748 209 GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD 288 (502)
Q Consensus 209 ~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~d 288 (502)
+..+++++.++.|..+|..+++.+...... ...........+ ... + ..++.++.+
T Consensus 143 ~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~------------------~~~~~~~~~~~~----~~~-~--~~v~~g~~~ 197 (376)
T 3q7m_A 143 DGLVLIHTSNGQLQALNEADGAVKWTVNLD------------------MPSLSLRGESAP----TTA-F--GAAVVGGDN 197 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECC------------------C-----CCCCCC----EEE-T--TEEEECCTT
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEeCC------------------CCceeecCCCCc----EEE-C--CEEEEEcCC
Confidence 557888888999999999876544321110 000000111111 222 2 367788889
Q ss_pred CcEEEEeCCCCeeeEeeccCCCC----eEE---EEEcC--CCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEE
Q 010748 289 KQVKIWDVAAGKCNLTLEHHTDK----VQA---VAWNH--HSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLA 359 (502)
Q Consensus 289 g~v~vwd~~~~~~~~~~~~h~~~----v~~---l~~~~--~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~ 359 (502)
+.|..+|..+++.+..+...... +.. +...| .+ ..++.++.++.+..+|.++++..- ... ......+.
T Consensus 198 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~v~~~~~~g~l~~~d~~tG~~~w-~~~-~~~~~~~~ 274 (376)
T 3q7m_A 198 GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVN-GVVFALAYNGNLTALDLRSGQIMW-KRE-LGSVNDFI 274 (376)
T ss_dssp TEEEEEETTTCCEEEEEECCC-----------CCCCCCEEET-TEEEEECTTSCEEEEETTTCCEEE-EEC-CCCEEEEE
T ss_pred CEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEEC-CEEEEEecCcEEEEEECCCCcEEe-ecc-CCCCCCce
Confidence 99999999999888776432110 000 00111 12 467888889999999998876432 111 12233444
Q ss_pred eCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEec-cCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCC
Q 010748 360 WDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA-HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 438 (502)
Q Consensus 360 ~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~ 438 (502)
.. + ..+++++.+|.|..+|..++ ..++.... ....+...... + ..|+.++.+|.|.++|..+++
T Consensus 275 ~~--~-~~l~~~~~~g~l~~~d~~tG---------~~~w~~~~~~~~~~~~~~~~--~-~~l~v~~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 275 VD--G-NRIYLVDQNDRVMALTIDGG---------VTLWTQSDLLHRLLTSPVLY--N-GNLVVGDSEGYLHWINVEDGR 339 (376)
T ss_dssp EE--T-TEEEEEETTCCEEEEETTTC---------CEEEEECTTTTSCCCCCEEE--T-TEEEEECTTSEEEEEETTTCC
T ss_pred EE--C-CEEEEEcCCCeEEEEECCCC---------cEEEeecccCCCcccCCEEE--C-CEEEEEeCCCeEEEEECCCCc
Confidence 43 2 36888888999999999987 55565542 22233333333 2 678889999999999999988
Q ss_pred eeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEE
Q 010748 439 PSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 478 (502)
Q Consensus 439 ~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd 478 (502)
.. .........+.+.....++ .|..++.+|.|+.|+
T Consensus 340 ~~--~~~~~~~~~~~~~~~~~~~--~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 340 FV--AQQKVDSSGFQTEPVAADG--KLLIQAKDGTVYSIT 375 (376)
T ss_dssp EE--EEEECCTTCBCSCCEEETT--EEEEEBTTSCEEEEE
T ss_pred EE--EEEecCCCcceeCCEEECC--EEEEEeCCCEEEEEe
Confidence 43 3333222222221111244 367788999999987
No 234
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.88 E-value=7.3e-08 Score=96.82 Aligned_cols=255 Identities=12% Similarity=0.132 Sum_probs=161.0
Q ss_pred EEEecCCCcEEEeeCCCCCCcCcceecCCcchh------hhhhccccC----------Cccc-ccccccCcccceeeEEe
Q 010748 212 MAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEE------KKKKKSKKG----------KKSS-IKYKKGSHTDSVLGLAW 274 (502)
Q Consensus 212 la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~------~~~~~~~~~----------~~~~-~~~~~~~h~~~V~~l~~ 274 (502)
+.+|+..|.++|+-+.+++.+..+.++...... ..++....+ .... ....-..|. ..+++
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh---~~~s~ 94 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHH---VHMSF 94 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCC---EEEEE
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCc---cccCC
Confidence 678899999999999999888777766543322 011101000 0000 010111121 33444
Q ss_pred ---ccCCCcEEEEEecCCcEEEEeCCCCeeeEeecc-CCCCeEEEEE-c-CCCCcEEEEEe------------------C
Q 010748 275 ---NKEFRNILASASADKQVKIWDVAAGKCNLTLEH-HTDKVQAVAW-N-HHSPQILLSGS------------------F 330 (502)
Q Consensus 275 ---~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~-h~~~v~~l~~-~-~~~~~~l~s~s------------------~ 330 (502)
.++|+.++++...++.|.+.|+.+.++...+.- ....+..+++ . |++ .++++++ .
T Consensus 95 t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~-~~v~~~~~~~~p~~~dg~~l~~~~~~ 173 (595)
T 1fwx_A 95 TEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRS-NYVFCNGEDETPLVNDGTNMEDVANY 173 (595)
T ss_dssp ETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBC-SEEEEEECSCEESSCSSSSTTCGGGE
T ss_pred CCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCC-cEEEEecccccccCCCCccccccccc
Confidence 236565666666677899999999998885532 2345788887 4 888 6666664 3
Q ss_pred CCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEEEEEeCC------------------------------------
Q 010748 331 DRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLED------------------------------------ 374 (502)
Q Consensus 331 dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~d------------------------------------ 374 (502)
++.+.+.|..+.+... .....+....++++|++...++++...
T Consensus 174 ~~~vtvID~~t~~v~~-qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~ 252 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAW-QVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 252 (595)
T ss_dssp EEEEEEEETTTTEEEE-EEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred CceEEEEECCCCeEEE-EEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence 4578999998765433 334444667788999877444444222
Q ss_pred -CcEEEEECCCCCCCCCCCCCcc-ceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCe----------eEE
Q 010748 375 -GTIKGFDIRTAKSDPDSTSQQS-SFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP----------SCI 442 (502)
Q Consensus 375 -g~v~i~d~~~~~~~~~~~~~~~-~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~----------~~~ 442 (502)
+.|.+.|.++.. ... +..+.. .....++.++|+|..+++++..+.+|.++|+.+.+. ...
T Consensus 253 i~~V~VID~~~~~-------~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~ 324 (595)
T 1fwx_A 253 LNGVKVVDGRKEA-------SSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVV 324 (595)
T ss_dssp ETTEEEEECSGGG-------CCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEE
T ss_pred ECcEEEEeCcccC-------CceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceE
Confidence 236666666520 022 334433 235678999999955666666789999999986421 122
Q ss_pred EEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010748 443 ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 443 ~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~ 481 (502)
.... -......++|+|+| +++++.-.++.|.+||+.+
T Consensus 325 ~~v~-vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 325 AEPE-LGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp ECCB-CCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred EEcC-CCCCcceEEECCCC-eEEEEEecCCcEEEEEhhH
Confidence 3333 23457899999999 6788888999999999977
No 235
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.86 E-value=2.2e-06 Score=83.29 Aligned_cols=228 Identities=11% Similarity=0.093 Sum_probs=139.3
Q ss_pred CCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEec
Q 010748 208 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA 287 (502)
Q Consensus 208 ~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~ 287 (502)
.+..|++++.++.|..+|..+++....... ........... + ..++.++.
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~---------------------------~~~~~~~p~~~-~--~~v~v~~~ 151 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKV---------------------------AGEALSRPVVS-D--GLVLIHTS 151 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEEC---------------------------SSCCCSCCEEE-T--TEEEEECT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeC---------------------------CCceEcCCEEE-C--CEEEEEcC
Confidence 466788888899999999987654332110 00001111122 2 37788889
Q ss_pred CCcEEEEeCCCCeeeEeeccCCCCe-----EEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCC-----eeE
Q 010748 288 DKQVKIWDVAAGKCNLTLEHHTDKV-----QAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAAD-----VES 357 (502)
Q Consensus 288 dg~v~vwd~~~~~~~~~~~~h~~~v-----~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~-----v~~ 357 (502)
++.|..+|..+|+.+..+....... ...... + ..+++++.++.|..+|..+++..-.. ....+ +..
T Consensus 152 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~-~~v~~g~~~g~l~~~d~~tG~~~w~~-~~~~~~~~~~~~~ 227 (376)
T 3q7m_A 152 NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--F-GAAVVGGDNGRVSAVLMEQGQMIWQQ-RISQATGSTEIDR 227 (376)
T ss_dssp TSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--T-TEEEECCTTTEEEEEETTTCCEEEEE-ECCC---------
T ss_pred CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--C-CEEEEEcCCCEEEEEECCCCcEEEEE-ecccCCCCccccc
Confidence 9999999999999887775432111 111222 2 46778888999999999877643211 11110 000
Q ss_pred ---EEeCCC-CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEE
Q 010748 358 ---LAWDPH-AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 433 (502)
Q Consensus 358 ---v~~~~~-~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd 433 (502)
+...|- ....+++++.+|.|..+|.+++ ..++.... .....+... + ..|+.++.++.|..+|
T Consensus 228 ~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG---------~~~w~~~~--~~~~~~~~~--~-~~l~~~~~~g~l~~~d 293 (376)
T 3q7m_A 228 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSG---------QIMWKREL--GSVNDFIVD--G-NRIYLVDQNDRVMALT 293 (376)
T ss_dssp --CCCCCCEEETTEEEEECTTSCEEEEETTTC---------CEEEEECC--CCEEEEEEE--T-TEEEEEETTCCEEEEE
T ss_pred ccccCCCcEEECCEEEEEecCcEEEEEECCCC---------cEEeeccC--CCCCCceEE--C-CEEEEEcCCCeEEEEE
Confidence 001110 1236888888999999999887 45555442 234445444 3 6788888899999999
Q ss_pred CCCCCeeEEEEec-CCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010748 434 LSNNQPSCIASRN-PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 434 ~~~~~~~~~~~~~-~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~ 488 (502)
..+++. +.... .....+...... +. .|.+++.+|.|.++|..+++.+.+.
T Consensus 294 ~~tG~~--~w~~~~~~~~~~~~~~~~--~~-~l~v~~~~g~l~~~d~~tG~~~~~~ 344 (376)
T 3q7m_A 294 IDGGVT--LWTQSDLLHRLLTSPVLY--NG-NLVVGDSEGYLHWINVEDGRFVAQQ 344 (376)
T ss_dssp TTTCCE--EEEECTTTTSCCCCCEEE--TT-EEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCCCcE--EEeecccCCCcccCCEEE--CC-EEEEEeCCCeEEEEECCCCcEEEEE
Confidence 999884 33333 111222222232 23 4777888999999999999877543
No 236
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.85 E-value=7.1e-07 Score=93.97 Aligned_cols=185 Identities=13% Similarity=0.182 Sum_probs=117.9
Q ss_pred eeeEEeccCCCcEEEEEecCCc-------------------EEEEeCCCCeeeEeecc--CC-------CCeEEEEEcCC
Q 010748 269 VLGLAWNKEFRNILASASADKQ-------------------VKIWDVAAGKCNLTLEH--HT-------DKVQAVAWNHH 320 (502)
Q Consensus 269 V~~l~~~~~~~~~l~sgs~dg~-------------------v~vwd~~~~~~~~~~~~--h~-------~~v~~l~~~~~ 320 (502)
...+++.|. ..+|+.++.++. |..||..+|+.+..++. |. ..+.......+
T Consensus 237 w~~~~~d~~-~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~ 315 (689)
T 1yiq_A 237 WDSFAYDPE-LNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPID 315 (689)
T ss_dssp CSCEEEETT-TTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEET
T ss_pred ccceeEcCC-CCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccC
Confidence 346788887 457888877763 99999999999888753 21 12222222223
Q ss_pred C--CcEEEEEeCCCcEEEEecCCCCCccce------Eeec---------------------------------CCeeEEE
Q 010748 321 S--PQILLSGSFDRSVVMKDARISTHSGFK------WAVA---------------------------------ADVESLA 359 (502)
Q Consensus 321 ~--~~~l~s~s~dg~i~iwd~~~~~~~~~~------~~~~---------------------------------~~v~~v~ 359 (502)
+ ...++.++.+|.++++|.++++.+... +... ..-..++
T Consensus 316 G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a 395 (689)
T 1yiq_A 316 GKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMS 395 (689)
T ss_dssp TEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCE
T ss_pred CcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcce
Confidence 4 137889999999999999988764211 0000 0011267
Q ss_pred eCCCCCCEEEEEeC---------------------------------------------CCcEEEEECCCCCCCCCCCCC
Q 010748 360 WDPHAEHSFVVSLE---------------------------------------------DGTIKGFDIRTAKSDPDSTSQ 394 (502)
Q Consensus 360 ~~~~~~~~~~~~~~---------------------------------------------dg~v~i~d~~~~~~~~~~~~~ 394 (502)
++|... ++++... +|.|+.||+.++
T Consensus 396 ~dp~~~-~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG--------- 465 (689)
T 1yiq_A 396 YNPDTG-LVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQ--------- 465 (689)
T ss_dssp EETTTT-EEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTT---------
T ss_pred ECCCCC-EEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCC---------
Confidence 777655 5555422 377999999987
Q ss_pred ccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCC-cEEEEEEcCCCCcEEEEE
Q 010748 395 QSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAG-AVFSVAFSEDSPFVLAIG 468 (502)
Q Consensus 395 ~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~-~v~~~~~spd~~~ll~sg 468 (502)
+.+++...+.. +....+...+ .++++++.||.|+.||.++++. +..+....+ ...-+.|..+|+..+++.
T Consensus 466 ~~~W~~~~~~~-~~~g~~~tag-glvf~gt~dg~l~a~D~~tG~~--lw~~~~~~~~~~~p~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 466 QAAWEVPYVTI-FNGGTLSTAG-NLVFEGSADGRVIAYAADTGEK--LWEQPAASGVMAAPVTYSVDGEQYVTFM 536 (689)
T ss_dssp EEEEEEEESSS-CCCCEEEETT-TEEEEECTTSEEEEEETTTCCE--EEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred CeEeEccCCCC-ccCccceECC-CEEEEECCCCcEEEEECCCCcc--ceeeeCCCCcccCceEEEECCEEEEEEE
Confidence 67777765543 3333455555 7899999999999999999984 444433222 113356778886444443
No 237
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.83 E-value=2.3e-07 Score=88.21 Aligned_cols=219 Identities=12% Similarity=0.071 Sum_probs=142.2
Q ss_pred CCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecC
Q 010748 209 GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD 288 (502)
Q Consensus 209 ~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~d 288 (502)
+..|.+|+.++.|..+|.. +..... ...+...+.++...++ + .|..|+.+
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~---------------------------~~~~~~~~~~~~~~~~-g-~l~vgt~~ 156 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWR---------------------------FKTKKAIYATPIVSED-G-TIYVGSND 156 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEE---------------------------EECSSCCCSCCEECTT-S-CEEEECTT
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEE---------------------------EcCCCceeeeeEEcCC-C-EEEEEcCC
Confidence 5567788888999999876 332111 0112234556666666 3 36678888
Q ss_pred CcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEE
Q 010748 289 KQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSF 368 (502)
Q Consensus 289 g~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~ 368 (502)
+.|..||.. ++.+..+......+.++...+++ . +..++ +.|..+| .++............+.++...+++ .+
T Consensus 157 ~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g-~-l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g--~l 228 (330)
T 3hxj_A 157 NYLYAINPD-GTEKWRFKTNDAITSAASIGKDG-T-IYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDG--TI 228 (330)
T ss_dssp SEEEEECTT-SCEEEEEECSSCCCSCCEECTTC-C-EEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTS--CE
T ss_pred CEEEEECCC-CCEeEEEecCCCceeeeEEcCCC-E-EEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCC--eE
Confidence 999999998 88777776556667777887777 4 44455 8899999 5443322122223457777887764 47
Q ss_pred EEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCC
Q 010748 369 VVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPK 448 (502)
Q Consensus 369 ~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~ 448 (502)
++++.++.|..++.. + ..++.+......+.++.+.++ ..|..++.+|.|..+|. +++. +......
T Consensus 229 ~v~t~~~gl~~~~~~-g---------~~~~~~~~~~~~~~~~~~~~~--g~l~v~t~~ggl~~~d~-~g~~--~~~~~~~ 293 (330)
T 3hxj_A 229 YVTSLDGHLYAINPD-G---------TEKWRFKTGKRIESSPVIGNT--DTIYFGSYDGHLYAINP-DGTE--KWNFETG 293 (330)
T ss_dssp EEEETTTEEEEECTT-S---------CEEEEEECSSCCCSCCEECTT--SCEEEECTTCEEEEECT-TSCE--EEEEECS
T ss_pred EEEcCCCeEEEECCC-C---------CEeEEeeCCCCccccceEcCC--CeEEEecCCCCEEEECC-CCcE--EEEEEcC
Confidence 778888889888743 2 445555555454556666654 45777888888999996 5553 3333334
Q ss_pred CCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCC
Q 010748 449 AGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 449 ~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~ 482 (502)
...+.++...+++. |..|+.+|.+++......
T Consensus 294 ~~~~~~~~~d~~g~--l~~gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 294 SWIIATPVIDENGT--IYFGTRNGKFYALFNLEH 325 (330)
T ss_dssp SCCCSCCEECTTCC--EEEECTTSCEEEEEC---
T ss_pred CccccceEEcCCCE--EEEEcCCCeEEEEecccc
Confidence 45567778888886 556899999998876543
No 238
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.83 E-value=1e-06 Score=92.60 Aligned_cols=199 Identities=9% Similarity=0.116 Sum_probs=126.9
Q ss_pred ceeeEEeccCCCcEEEEEecCC-------------------cEEEEeCCCCeeeEeecc--CC-------CCeEEEEEcC
Q 010748 268 SVLGLAWNKEFRNILASASADK-------------------QVKIWDVAAGKCNLTLEH--HT-------DKVQAVAWNH 319 (502)
Q Consensus 268 ~V~~l~~~~~~~~~l~sgs~dg-------------------~v~vwd~~~~~~~~~~~~--h~-------~~v~~l~~~~ 319 (502)
....+++.|. ..+|+.++.++ +|..+|..+|+.+..++. |. .....+....
T Consensus 244 ~w~~~~~d~~-~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~ 322 (677)
T 1kb0_A 244 MWDSMTFDAE-LNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKI 322 (677)
T ss_dssp CCSCEEEETT-TTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEE
T ss_pred cccceeEcCC-CCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEeccc
Confidence 3456788888 45777776654 599999999999887753 21 1122223333
Q ss_pred CCC--cEEEEEeCCCcEEEEecCCCCCccceEeec----------CC-e------------------------eEEEeCC
Q 010748 320 HSP--QILLSGSFDRSVVMKDARISTHSGFKWAVA----------AD-V------------------------ESLAWDP 362 (502)
Q Consensus 320 ~~~--~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~----------~~-v------------------------~~v~~~~ 362 (502)
+|. ..++.++.+|.|+++|.++++.+....... +. + ..++++|
T Consensus 323 dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp 402 (677)
T 1kb0_A 323 AGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNP 402 (677)
T ss_dssp TTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEET
T ss_pred CCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcC
Confidence 442 578899999999999999887543211000 00 0 1467788
Q ss_pred CCCCEEEEEeC-------------------------------------------CCcEEEEECCCCCCCCCCCCCccceE
Q 010748 363 HAEHSFVVSLE-------------------------------------------DGTIKGFDIRTAKSDPDSTSQQSSFT 399 (502)
Q Consensus 363 ~~~~~~~~~~~-------------------------------------------dg~v~i~d~~~~~~~~~~~~~~~~~~ 399 (502)
+.. ++++... .|.|..||+.++ +.+++
T Consensus 403 ~~~-~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG---------~~~W~ 472 (677)
T 1kb0_A 403 QTG-LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQ---------KAAWS 472 (677)
T ss_dssp TTT-EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTT---------EEEEE
T ss_pred CCC-EEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCC---------cEEee
Confidence 755 5655432 277999999887 66777
Q ss_pred EeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCC-CcEEEEEEcCCCCcEEEEEeC--------
Q 010748 400 LHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKA-GAVFSVAFSEDSPFVLAIGGS-------- 470 (502)
Q Consensus 400 ~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~-~~v~~~~~spd~~~ll~sg~~-------- 470 (502)
... ..++.+..+...+ .++++++.||.+++||..+++. +..+.... ..-.-+.|..+|+..+++.+.
T Consensus 473 ~~~-~~~~~~g~~~~~g-~~v~~g~~dg~l~a~D~~tG~~--lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~ 548 (677)
T 1kb0_A 473 VEH-VSPWNGGTLTTAG-NVVFQGTADGRLVAYHAATGEK--LWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLA 548 (677)
T ss_dssp EEE-SSSCCCCEEEETT-TEEEEECTTSEEEEEETTTCCE--EEEEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHH
T ss_pred cCC-CCCCcCcceEeCC-CEEEEECCCCcEEEEECCCCce--eeeeeCCCCcccCCEEEEeCCEEEEEEeccCCcccccc
Confidence 653 3444555566666 7888899999999999999984 44433221 222335566788644444322
Q ss_pred --------CCcEEEEECCC
Q 010748 471 --------KGKLEIWDTLS 481 (502)
Q Consensus 471 --------dg~i~vwd~~~ 481 (502)
.+.+.+|.+..
T Consensus 549 ~~~~~~~~~~~l~~f~l~~ 567 (677)
T 1kb0_A 549 ARATERQGPGTVYTFVVGG 567 (677)
T ss_dssp CCSCSCCCCCEEEEEEETC
T ss_pred ccccccCCCCeEEEEeccc
Confidence 36788888864
No 239
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.81 E-value=7.4e-07 Score=81.26 Aligned_cols=198 Identities=10% Similarity=0.001 Sum_probs=134.1
Q ss_pred ceeeEEeccCCCcEEEEEec--CCcEEEEeCCCCeeeEeeccCC-CCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCC
Q 010748 268 SVLGLAWNKEFRNILASASA--DKQVKIWDVAAGKCNLTLEHHT-DKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH 344 (502)
Q Consensus 268 ~V~~l~~~~~~~~~l~sgs~--dg~v~vwd~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~ 344 (502)
....|.|+++ +.++++.+. ++.|.++|+.+++.+.++.... .....+++. +..+.++.-.++.+.++|..+.+.
T Consensus 22 f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 22 FTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSN 98 (266)
T ss_dssp CEEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEE
T ss_pred CcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcE
Confidence 3579999998 444444443 5799999999999988875222 233455665 335666666789999999998766
Q ss_pred ccceEeec-CCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEecc--C---CCeeEEEEcCCCCC
Q 010748 345 SGFKWAVA-ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH--D---KAVCTISYNPLVPN 418 (502)
Q Consensus 345 ~~~~~~~~-~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h--~---~~v~~l~~sp~~~~ 418 (502)
... .... ..-..+ ++++..++ ++..++.|.++|..+. +.+..+... . ..++.+.|. ++ .
T Consensus 99 ~~~-i~~g~~~g~gl--t~Dg~~l~-vs~gs~~l~viD~~t~---------~v~~~I~Vg~~~~p~~~~nele~~-dg-~ 163 (266)
T 2iwa_A 99 IKN-FTHQMKDGWGL--ATDGKILY-GSDGTSILYEIDPHTF---------KLIKKHNVKYNGHRVIRLNELEYI-NG-E 163 (266)
T ss_dssp EEE-EECCSSSCCEE--EECSSSEE-EECSSSEEEEECTTTC---------CEEEEEECEETTEECCCEEEEEEE-TT-E
T ss_pred EEE-EECCCCCeEEE--EECCCEEE-EECCCCeEEEEECCCC---------cEEEEEEECCCCcccccceeEEEE-CC-E
Confidence 543 3333 222334 44566544 5557889999999886 444444422 1 236678887 44 5
Q ss_pred EEEEEeCCCcEEEEECCCCCeeEEEEecC-----------CCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010748 419 LLATGSTDKMVKLWDLSNNQPSCIASRNP-----------KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 419 ~l~t~s~dg~i~vwd~~~~~~~~~~~~~~-----------~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~ 483 (502)
+.+.....+.|.+.|..+++........+ .......++|+|++..+++++...+.|.+.++....
T Consensus 164 lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 164 VWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp EEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred EEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEeccc
Confidence 55555568899999999998544444321 113568999999998888988888999999987643
No 240
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.81 E-value=4.1e-06 Score=81.71 Aligned_cols=210 Identities=6% Similarity=0.043 Sum_probs=138.1
Q ss_pred cceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCcc
Q 010748 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG 346 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~ 346 (502)
..+..++|.+..+.++.+-...+.|..+++..+.....+.........+++.+.+..++++-...+.|.+.++.......
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~ 195 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 195 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEE
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEE
Confidence 45789999987566666666778999999886654443433334556788887664666777777889888887544332
Q ss_pred ceEeecCCeeEEEeCCCCCCEEEEEeCC-CcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeC
Q 010748 347 FKWAVAADVESLAWDPHAEHSFVVSLED-GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST 425 (502)
Q Consensus 347 ~~~~~~~~v~~v~~~~~~~~~~~~~~~d-g~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~ 425 (502)
...........++++|.+..++++-... +.|..+++... .........-.....|+|+|.+..+.++-+.
T Consensus 196 l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~---------~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~ 266 (386)
T 3v65_B 196 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS---------GRRIIADTHLFWPNGLTIDYAGRRMYWVDAK 266 (386)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---------SCEEEECSSCSCEEEEEEEGGGTEEEEEETT
T ss_pred eecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC---------CcEEEEECCCCCeeeEEEeCCCCEEEEEECC
Confidence 2222235678899998777555555555 78888887643 1112222233457899999876466666667
Q ss_pred CCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccc
Q 010748 426 DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 426 dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
.+.|..+++.......+ ..........+++.. + +++.+-...+.|..++..++..+..+.
T Consensus 267 ~~~I~~~d~dG~~~~~~--~~~~~~~P~giav~~-~-~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 267 HHVIERANLDGSHRKAV--ISQGLPHPFAITVFE-D-SLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp TTEEEEECTTSCSCEEE--ECSSCSSEEEEEEET-T-EEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCEEEEEeCCCCeeEEE--EECCCCCceEEEEEC-C-EEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 78899999876543222 222345677888833 3 467777778899999976766554443
No 241
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.80 E-value=1.4e-07 Score=91.54 Aligned_cols=199 Identities=16% Similarity=0.165 Sum_probs=130.9
Q ss_pred eeEEec--cCCCcEEEEEecCCcEEEEeCCCC----eeeEeec------c-CCCCeEEEEEcCCCCcEEEEEeCC-----
Q 010748 270 LGLAWN--KEFRNILASASADKQVKIWDVAAG----KCNLTLE------H-HTDKVQAVAWNHHSPQILLSGSFD----- 331 (502)
Q Consensus 270 ~~l~~~--~~~~~~l~sgs~dg~v~vwd~~~~----~~~~~~~------~-h~~~v~~l~~~~~~~~~l~s~s~d----- 331 (502)
.+..++ ++.+.++++|..+++|.|+|+.+. +.+.++. . .......+...|++ +++++..+
T Consensus 85 ~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~ 162 (462)
T 2ece_A 85 LCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEG 162 (462)
T ss_dssp GSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCS
T ss_pred cccccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCC
Confidence 344556 776777788888999999999755 6666662 1 11245567788998 66666555
Q ss_pred -CcEEEEecCCCCCccceEeec-C---CeeEEEeCCCCCCEEEEEe-------------------CCCcEEEEECCCCCC
Q 010748 332 -RSVVMKDARISTHSGFKWAVA-A---DVESLAWDPHAEHSFVVSL-------------------EDGTIKGFDIRTAKS 387 (502)
Q Consensus 332 -g~i~iwd~~~~~~~~~~~~~~-~---~v~~v~~~~~~~~~~~~~~-------------------~dg~v~i~d~~~~~~ 387 (502)
|.|.++|..+.+... .+... . --..+.|+|++. .++++. ...+|.+||+.+.
T Consensus 163 ~g~v~vlD~~T~~v~~-~~~~~~~~~~~~Yd~~~~p~~~-~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~-- 238 (462)
T 2ece_A 163 PGGILMLDHYSFEPLG-KWEIDRGDQYLAYDFWWNLPNE-VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR-- 238 (462)
T ss_dssp CCEEEEECTTTCCEEE-ECCSBCTTCCCCCCEEEETTTT-EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT--
T ss_pred CCeEEEEECCCCeEEE-EEccCCCCccccceEEECCCCC-EEEEccCcCccccccccchhhhhhccCCEEEEEECCCC--
Confidence 789999999887655 33222 1 123477899766 566653 3689999999875
Q ss_pred CCCCCCCccceEEecc-C-CCeeEEEE--cCCCCCEEEEEe-----CCCcEEEEECCCCCeeEEEE--ecCC--------
Q 010748 388 DPDSTSQQSSFTLHAH-D-KAVCTISY--NPLVPNLLATGS-----TDKMVKLWDLSNNQPSCIAS--RNPK-------- 448 (502)
Q Consensus 388 ~~~~~~~~~~~~~~~h-~-~~v~~l~~--sp~~~~~l~t~s-----~dg~i~vwd~~~~~~~~~~~--~~~~-------- 448 (502)
+.+.++... . .....+.| +|++...++++- .+++|.+|....+....... ....
T Consensus 239 -------k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~ 311 (462)
T 2ece_A 239 -------KRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPE 311 (462)
T ss_dssp -------EEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCG
T ss_pred -------cEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccc
Confidence 455555542 1 23344555 999844445555 67788887765543222221 1110
Q ss_pred --------CCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010748 449 --------AGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 449 --------~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~ 481 (502)
......+.++||+++|+++.-..+.|.+||+..
T Consensus 312 ~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 312 ILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp GGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSS
T ss_pred cccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 134678999999999777777788999999863
No 242
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.77 E-value=1.2e-07 Score=91.19 Aligned_cols=212 Identities=9% Similarity=0.044 Sum_probs=125.6
Q ss_pred cceeeEEeccCCCcEEEEEe--cCCcEEEEeCCCCeeeEee-------ccCCCCeEEEEEcCCCCcEEEEEeC-----CC
Q 010748 267 DSVLGLAWNKEFRNILASAS--ADKQVKIWDVAAGKCNLTL-------EHHTDKVQAVAWNHHSPQILLSGSF-----DR 332 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs--~dg~v~vwd~~~~~~~~~~-------~~h~~~v~~l~~~~~~~~~l~s~s~-----dg 332 (502)
..+..+++++++ .++++.. .++.++||.+.+++.. .+ ..|-..+.++++.+++ +++++-.. .+
T Consensus 17 ~~p~~va~~~~g-~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g-~L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 17 LAPGNITLTPDG-RLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNG-IVWMLDNGNQSKSVP 93 (343)
T ss_dssp SCEEEEEECTTS-CEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSS-EEEEEECHHHHTSCC
T ss_pred CCcceEEECCCC-CEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCC-cEEEEcCCCCcCCCC
Confidence 578999999995 4777754 2343555555455533 22 2345689999999998 65555433 57
Q ss_pred cEEEEecCCCCCccceEe------ecCCeeEEEeCCCCCCEEEEEe---CCCcEEEEECCCCCCCCCC------CCCccc
Q 010748 333 SVVMKDARISTHSGFKWA------VAADVESLAWDPHAEHSFVVSL---EDGTIKGFDIRTAKSDPDS------TSQQSS 397 (502)
Q Consensus 333 ~i~iwd~~~~~~~~~~~~------~~~~v~~v~~~~~~~~~~~~~~---~dg~v~i~d~~~~~~~~~~------~~~~~~ 397 (502)
.|.+||+.+++....... ....+..+++++.+...+++.. .++.|.+||+.++...... ......
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~ 173 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDID 173 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCC
T ss_pred eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccc
Confidence 899999987764332211 1234688999986554445554 5789999998765210000 000000
Q ss_pred eEEec--------------cCCCeeEEEEcCCCCCEEEEEeCCC-cEEEEECC---CCCe-----eEEEEecCCCCcEEE
Q 010748 398 FTLHA--------------HDKAVCTISYNPLVPNLLATGSTDK-MVKLWDLS---NNQP-----SCIASRNPKAGAVFS 454 (502)
Q Consensus 398 ~~~~~--------------h~~~v~~l~~sp~~~~~l~t~s~dg-~i~vwd~~---~~~~-----~~~~~~~~~~~~v~~ 454 (502)
....+ ....+..|+|+|++ +.|+.+...+ .|..++.. .... .......++.+....
T Consensus 174 ~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg-~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdg 252 (343)
T 2qe8_A 174 LVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAEN-EWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDG 252 (343)
T ss_dssp CEETTEECBEECTTSCEECCCCCEEEEEECTTS-CEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSC
T ss_pred eeECCEEEEeccCCCceeceecccceeEeccCC-CEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCce
Confidence 00000 01246889999998 7777776655 45444431 1110 000011122234567
Q ss_pred EEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010748 455 VAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 455 ~~~spd~~~ll~sg~~dg~i~vwd~~~~~ 483 (502)
++++++|. ++++...++.|.+||..+++
T Consensus 253 ia~d~~G~-l~va~~~~~~V~~~d~~~G~ 280 (343)
T 2qe8_A 253 ISIDKDHN-IYVGDLAHSAIGVITSADRA 280 (343)
T ss_dssp EEECTTCC-EEEEEGGGTEEEEEETTTTE
T ss_pred EEECCCCC-EEEEccCCCeEEEEECCCCC
Confidence 89999997 68888888999999985554
No 243
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.76 E-value=1.4e-05 Score=78.35 Aligned_cols=213 Identities=12% Similarity=0.059 Sum_probs=138.5
Q ss_pred ccceeeEEeccCCCcEEEEEecCCcEEEEeCCCC----eeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCC
Q 010748 266 TDSVLGLAWNKEFRNILASASADKQVKIWDVAAG----KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI 341 (502)
Q Consensus 266 ~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~----~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~ 341 (502)
...+..|+|.+..+.++.+-...+.|+.+++... .....+.........|++.+.+.+++++-...+.|.+.++..
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g 190 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 190 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence 4568899999875656666666788999998752 223333334456788999886546777777788999999876
Q ss_pred CCCccceEeecCCeeEEEeCCCCCCEEEEEeC-CCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEE
Q 010748 342 STHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLL 420 (502)
Q Consensus 342 ~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~-dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 420 (502)
................++++|.+..++++-.. .+.|...++... .........-.....|++++.+..+.
T Consensus 191 ~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~---------~~~~~~~~~l~~P~glavd~~~~~lY 261 (400)
T 3p5b_L 191 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV---------DIYSLVTENIQWPNGITLDLLSGRLY 261 (400)
T ss_dssp CSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC---------SCEEEECSSCSCEEEEEEETTTTEEE
T ss_pred CceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC---------ccEEEEECCCCceEEEEEEeCCCEEE
Confidence 54333222233457899999976644544433 478888888643 22222222335678999998774555
Q ss_pred EEEeCCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccc
Q 010748 421 ATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 421 ~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
++-+..+.|..+|+.......+...........++++..+ +++.+-...+.|..++..+++.+..+.
T Consensus 262 ~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~--~lywtd~~~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 262 WVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED--KVFWTDIINEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp EEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETT--EEEEEESSSCSEEEEESSSCCCCEEEE
T ss_pred EEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCC--EEEEecCCCCeEEEEEcCCCCceEEEe
Confidence 6656678899999977654444433333455677877433 467777778899999977776655443
No 244
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.75 E-value=3.6e-07 Score=86.86 Aligned_cols=180 Identities=10% Similarity=0.006 Sum_probs=121.2
Q ss_pred EEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeEEEe
Q 010748 281 ILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAW 360 (502)
Q Consensus 281 ~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~ 360 (502)
.|..++.++.|..+|.. ++....+..+...+.++...+++ . +..++.++.|..+|.. +............+.++..
T Consensus 109 ~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g-~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~ 184 (330)
T 3hxj_A 109 ILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDG-T-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASI 184 (330)
T ss_dssp EEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTS-C-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEE
T ss_pred EEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCC-E-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEE
Confidence 67778888999999988 77777666555666777777766 3 6678888999999988 4433222222344666677
Q ss_pred CCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCee
Q 010748 361 DPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS 440 (502)
Q Consensus 361 ~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~ 440 (502)
.+++. +++++ +.|..|| .++ ...+........+.++...+++ .|..++.++.|..++. +++.
T Consensus 185 d~~g~--l~v~t--~~l~~~d-~~g---------~~~~~~~~~~~~~~~~~~~~~g--~l~v~t~~~gl~~~~~-~g~~- 246 (330)
T 3hxj_A 185 GKDGT--IYFGS--DKVYAIN-PDG---------TEKWNFYAGYWTVTRPAISEDG--TIYVTSLDGHLYAINP-DGTE- 246 (330)
T ss_dssp CTTCC--EEEES--SSEEEEC-TTS---------CEEEEECCSSCCCSCCEECTTS--CEEEEETTTEEEEECT-TSCE-
T ss_pred cCCCE--EEEEe--CEEEEEC-CCC---------cEEEEEccCCcceeceEECCCC--eEEEEcCCCeEEEECC-CCCE-
Confidence 66543 66666 8899999 554 4556666566678888888865 4666777888888875 3432
Q ss_pred EEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccc
Q 010748 441 CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 441 ~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~ 486 (502)
+.........+.++.+.+++. |..++.+|.|..+|. +++.+.
T Consensus 247 -~~~~~~~~~~~~~~~~~~~g~--l~v~t~~ggl~~~d~-~g~~~~ 288 (330)
T 3hxj_A 247 -KWRFKTGKRIESSPVIGNTDT--IYFGSYDGHLYAINP-DGTEKW 288 (330)
T ss_dssp -EEEEECSSCCCSCCEECTTSC--EEEECTTCEEEEECT-TSCEEE
T ss_pred -eEEeeCCCCccccceEcCCCe--EEEecCCCCEEEECC-CCcEEE
Confidence 333333333344566666775 666788888999996 555443
No 245
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.73 E-value=1.4e-05 Score=76.65 Aligned_cols=208 Identities=5% Similarity=0.052 Sum_probs=137.3
Q ss_pred cceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCcc
Q 010748 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG 346 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~ 346 (502)
..+..++|.+..+.++.+-...+.|..+++..+.....+.........+++.+.+..++++-...+.|.+.++.......
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 152 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 152 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEE
Confidence 34789999987565666666778999999886654443333334567889988664666777778899999987654332
Q ss_pred ceEeecCCeeEEEeCCCCCCEEEEEeCC-CcEEEEECCCCCCCCCCCCCccceEE-eccCCCeeEEEEcCCCCCEEEEEe
Q 010748 347 FKWAVAADVESLAWDPHAEHSFVVSLED-GTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLLATGS 424 (502)
Q Consensus 347 ~~~~~~~~v~~v~~~~~~~~~~~~~~~d-g~v~i~d~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l~t~s 424 (502)
.....-.....++++|.+..++++-... +.|..+++... ....+ ...-.....|+++|.+..+.++-+
T Consensus 153 l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~----------~~~~~~~~~~~~PnGla~d~~~~~lY~aD~ 222 (349)
T 3v64_C 153 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS----------GRRIIADTHLFWPNGLTIDYAGRRMYWVDA 222 (349)
T ss_dssp EECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC----------SCEESCCSSCSCEEEEEEETTTTEEEEEET
T ss_pred EEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC----------CcEEEEECCCCCcceEEEeCCCCEEEEEEC
Confidence 2212234578899999776566665555 78888887643 11222 122345689999987646666666
Q ss_pred CCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010748 425 TDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 425 ~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~ 488 (502)
..+.|..+++.......+. .........+++. .+ +++.+-...+.|..++..+++.+..+
T Consensus 223 ~~~~I~~~~~dG~~~~~~~--~~~~~~P~giav~-~~-~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 223 KHHVIERANLDGSHRKAVI--SQGLPHPFAITVF-ED-SLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp TTTEEEEEETTSCSCEEEE--CSSCSSEEEEEEE-TT-EEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCCEEEEEeCCCCceEEEE--eCCCCCceEEEEE-CC-EEEEecCCCCeEEEEEccCCCccEEe
Confidence 6788999998765432222 2234567788884 33 46777777788999986666655443
No 246
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.72 E-value=5.9e-06 Score=78.42 Aligned_cols=258 Identities=9% Similarity=-0.020 Sum_probs=143.4
Q ss_pred cceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeE
Q 010748 193 PLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL 272 (502)
Q Consensus 193 ~~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 272 (502)
|-+++| .++++++.++..++.|..|+...... ..+......... . ..... . ..........+.+|
T Consensus 21 p~~i~~-------d~~g~~l~v~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~-~---~~~g~--~-~~~~~~~~~~p~gi 85 (322)
T 2fp8_A 21 PNSFTF-------DSTNKGFYTSVQDGRVIKYEGPNSGF-VDFAYASPYWNK-A---FCENS--T-DAEKRPLCGRTYDI 85 (322)
T ss_dssp CCCEEC-------CTTCSSEEEECTTSEEEEECCTTTCE-EEEEESCTTCCH-H---HHTTC--C-CGGGHHHHCCEEEE
T ss_pred ceEEEE-------cCCCCEEEEEcCCCeEEEECCCCCce-EEEecccccccc-c---ccccc--c-chhccccCCCCceE
Confidence 455665 67888888888899999998764221 110000000000 0 00000 0 00000112357889
Q ss_pred EeccCCCcEEEEEecCCcEEEEeCCCCeeeEeec----c-CCCCeEEEEEcC-CCCcEEEEEeC----------------
Q 010748 273 AWNKEFRNILASASADKQVKIWDVAAGKCNLTLE----H-HTDKVQAVAWNH-HSPQILLSGSF---------------- 330 (502)
Q Consensus 273 ~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~----~-h~~~v~~l~~~~-~~~~~l~s~s~---------------- 330 (502)
++.+..+ .|+.+...+.|..+|..+++. ..+. + .......+++.+ ++ ++.++-..
T Consensus 86 ~~~~~~g-~l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G-~l~v~d~~~~~~~~~~~~~~~~~~ 162 (322)
T 2fp8_A 86 SYNLQNN-QLYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTG-IVYFTDVSTLYDDRGVQQIMDTSD 162 (322)
T ss_dssp EEETTTT-EEEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTC-CEEEEESCSSCCTTCHHHHHHHTC
T ss_pred EEcCCCC-cEEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCC-EEEEECCcccccccccceehcccC
Confidence 9997324 355554555688899776542 2221 1 123468899999 88 66665432
Q ss_pred -CCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeE
Q 010748 331 -DRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCT 409 (502)
Q Consensus 331 -dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 409 (502)
.+.|..||..+..... ..........++|+|++..++++-+..+.|..|++..... .....+....+ ...
T Consensus 163 ~~g~v~~~d~~~~~~~~-~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~-------~~~~~~~~~~g-P~g 233 (322)
T 2fp8_A 163 KTGRLIKYDPSTKETTL-LLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKK-------GTAEVLVKIPN-PGN 233 (322)
T ss_dssp CCEEEEEEETTTTEEEE-EEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTT-------TCEEEEEECSS-EEE
T ss_pred CCceEEEEeCCCCEEEE-eccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcC-------CccceEEeCCC-CCC
Confidence 3678888876554322 2222345677999998764555556678999999875311 11111111223 788
Q ss_pred EEEcCCCCCEEEEEeC----------CCcEEEEECCCCCeeEEEEecC-C-CCcEEEEEEcCCCCcEEEEEeCCCcEEEE
Q 010748 410 ISYNPLVPNLLATGST----------DKMVKLWDLSNNQPSCIASRNP-K-AGAVFSVAFSEDSPFVLAIGGSKGKLEIW 477 (502)
Q Consensus 410 l~~sp~~~~~l~t~s~----------dg~i~vwd~~~~~~~~~~~~~~-~-~~~v~~~~~spd~~~ll~sg~~dg~i~vw 477 (502)
+++.++| ++.++... .+.|..+|.. ++......... . ...+.++++ .++. |+++....+.|.++
T Consensus 234 i~~d~~G-~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~-L~v~~~~~~~i~~~ 309 (322)
T 2fp8_A 234 IKRNADG-HFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGL-LYIGTLFHGSVGIL 309 (322)
T ss_dssp EEECTTS-CEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTE-EEEECSSCSEEEEE
T ss_pred eEECCCC-CEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCE-EEEeecCCCceEEE
Confidence 9999988 66655543 4668888875 44322222221 1 234666666 3554 66666677889999
Q ss_pred ECCC
Q 010748 478 DTLS 481 (502)
Q Consensus 478 d~~~ 481 (502)
++..
T Consensus 310 ~~~~ 313 (322)
T 2fp8_A 310 VYDK 313 (322)
T ss_dssp EC--
T ss_pred eccc
Confidence 8754
No 247
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.69 E-value=1.2e-05 Score=75.78 Aligned_cols=232 Identities=14% Similarity=0.100 Sum_probs=136.2
Q ss_pred cCCCcceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccc
Q 010748 189 IPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDS 268 (502)
Q Consensus 189 ~~~~~~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 268 (502)
...+|..++| +++++++++-...+.|..|+.+.. ... .. .....
T Consensus 30 ~~~~pegia~-------~~~g~lyv~d~~~~~I~~~d~~g~--~~~------------------------~~---~~~~~ 73 (306)
T 2p4o_A 30 VNTFLENLAS-------APDGTIFVTNHEVGEIVSITPDGN--QQI------------------------HA---TVEGK 73 (306)
T ss_dssp TTCCEEEEEE-------CTTSCEEEEETTTTEEEEECTTCC--EEE------------------------EE---ECSSE
T ss_pred CCCCcceEEE-------CCCCCEEEEeCCCCeEEEECCCCc--eEE------------------------EE---eCCCC
Confidence 3455667777 678887777777899999987531 000 00 11235
Q ss_pred eeeEEeccCCCcEEEEEec-CC-cEEEEeCCCCeeeEeec-cCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCc
Q 010748 269 VLGLAWNKEFRNILASASA-DK-QVKIWDVAAGKCNLTLE-HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS 345 (502)
Q Consensus 269 V~~l~~~~~~~~~l~sgs~-dg-~v~vwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~ 345 (502)
+.+|++.+++. ++++... ++ .|..++..+++...... ........++..+.+ ..+++-...+.|.++|.......
T Consensus 74 p~gia~~~dG~-l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~-~~~v~d~~~g~i~~~d~~~~~~~ 151 (306)
T 2p4o_A 74 VSGLAFTSNGD-LVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQPSGS 151 (306)
T ss_dssp EEEEEECTTSC-EEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSS-EEEEEETTTTEEEEEETTTTEEE
T ss_pred ceeEEEcCCCc-EEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCC-cEEEEECCCCeEEEEeCCCCcEe
Confidence 88899999954 5544433 22 47777877776543222 112233455555544 45555556888999987643111
Q ss_pred cce----------EeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCC
Q 010748 346 GFK----------WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPL 415 (502)
Q Consensus 346 ~~~----------~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~ 415 (502)
... ...-.....+ ++++..++++-+..+.|..|++..... ......+. .......+++.++
T Consensus 152 v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~------~~~~~~~~-~~~~P~gi~vd~d 222 (306)
T 2p4o_A 152 IWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDK------PGEPEIFV-EQTNIDDFAFDVE 222 (306)
T ss_dssp EEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSC------BCCCEEEE-ESCCCSSEEEBTT
T ss_pred EEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCC------CCccEEEe-ccCCCCCeEECCC
Confidence 000 0001123444 676665666667788999999875210 01111111 1134677899998
Q ss_pred CCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEc---CCCCcEEEEEe
Q 010748 416 VPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFS---EDSPFVLAIGG 469 (502)
Q Consensus 416 ~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~s---pd~~~ll~sg~ 469 (502)
| +++++....+.|.+++.. ++...+..........++++|. |++..|+++..
T Consensus 223 G-~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 223 G-NLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp C-CEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred C-CEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 8 777777778889999975 5432233333334568999998 88876666554
No 248
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.65 E-value=4.1e-06 Score=76.32 Aligned_cols=198 Identities=10% Similarity=0.010 Sum_probs=128.0
Q ss_pred CCcceeeeecCCCCCCCCCCEEEEecC--CCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccc
Q 010748 191 AFPLCMAWLDCPLKDREKGNFMAVGSM--EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDS 268 (502)
Q Consensus 191 ~~~~~~~~~~~~~~~s~~~~~la~g~~--dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 268 (502)
.+|..+.+ ++++.+.++.+. ++.|+++|+.+++.+....+ ..+ ..
T Consensus 21 ~f~~Gl~~-------~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l-------------------------~~~-~f 67 (266)
T 2iwa_A 21 AFTQGLVY-------AENDTLFESTGLYGRSSVRQVALQTGKVENIHKM-------------------------DDS-YF 67 (266)
T ss_dssp CCEEEEEE-------CSTTEEEEEECSTTTCEEEEEETTTCCEEEEEEC-------------------------CTT-CC
T ss_pred CCcccEEE-------eCCCeEEEECCCCCCCEEEEEECCCCCEEEEEec-------------------------CCC-cc
Confidence 34556666 677655554443 57999999987654432211 111 11
Q ss_pred eeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccce
Q 010748 269 VLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK 348 (502)
Q Consensus 269 V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 348 (502)
...+++.. ..+.++.-.++.|.++|..+.+.+.++..-...- ..+++++ ..|+++..++.|.++|..+.+.....
T Consensus 68 geGi~~~g--~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~g--~glt~Dg-~~l~vs~gs~~l~viD~~t~~v~~~I 142 (266)
T 2iwa_A 68 GEGLTLLN--EKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDG--WGLATDG-KILYGSDGTSILYEIDPHTFKLIKKH 142 (266)
T ss_dssp EEEEEEET--TEEEEEETTCSEEEEEETTTTEEEEEEECCSSSC--CEEEECS-SSEEEECSSSEEEEECTTTCCEEEEE
T ss_pred eEEEEEeC--CEEEEEEecCCEEEEEECCCCcEEEEEECCCCCe--EEEEECC-CEEEEECCCCeEEEEECCCCcEEEEE
Confidence 22455543 4455666678999999999999999885321222 3344566 44555557899999999887655432
Q ss_pred Eeec-----CCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEecc-------------CCCeeEE
Q 010748 349 WAVA-----ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH-------------DKAVCTI 410 (502)
Q Consensus 349 ~~~~-----~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h-------------~~~v~~l 410 (502)
.-.. ..++.+.|. ++ .+++....++.|.+.|..++ +.+..+... ....+.|
T Consensus 143 ~Vg~~~~p~~~~nele~~-dg-~lyvn~~~~~~V~vID~~tg---------~V~~~I~~~g~~~~~~~~~~~~~~v~nGI 211 (266)
T 2iwa_A 143 NVKYNGHRVIRLNELEYI-NG-EVWANIWQTDCIARISAKDG---------TLLGWILLPNLRKKLIDEGFRDIDVLNGI 211 (266)
T ss_dssp ECEETTEECCCEEEEEEE-TT-EEEEEETTSSEEEEEETTTC---------CEEEEEECHHHHHHHHHTTCTTCCCEEEE
T ss_pred EECCCCcccccceeEEEE-CC-EEEEecCCCCeEEEEECCCC---------cEEEEEECCCcccccccccccccCceEEE
Confidence 2111 236677787 44 35555556889999999987 455555421 1356899
Q ss_pred EEcCCCCCEEEEEeCCCcEEEEECCCC
Q 010748 411 SYNPLVPNLLATGSTDKMVKLWDLSNN 437 (502)
Q Consensus 411 ~~sp~~~~~l~t~s~dg~i~vwd~~~~ 437 (502)
+|+|++..+++|+...+.|.+.++...
T Consensus 212 a~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 212 AWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 999998778888888899998887654
No 249
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.61 E-value=1.7e-06 Score=90.79 Aligned_cols=243 Identities=10% Similarity=0.076 Sum_probs=141.4
Q ss_pred CCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEec
Q 010748 208 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA 287 (502)
Q Consensus 208 ~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~ 287 (502)
.+..|++++.++.|..+|..+++.+....... .. ........++ +. + + .++.++.
T Consensus 116 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~----------------~~--~~~~~~~~P~----v~-~-~-~v~vg~~ 170 (668)
T 1kv9_A 116 WGDKVYVGTLDGRLIALDAKTGKAIWSQQTTD----------------PA--KPYSITGAPR----VV-K-G-KVIIGNG 170 (668)
T ss_dssp EBTEEEEECTTSEEEEEETTTCCEEEEEECSC----------------TT--SSCBCCSCCE----EE-T-T-EEEECCB
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEeeeeccCC----------------CC--CcceecCCCE----EE-C-C-EEEEeCC
Confidence 36788889999999999998876554321100 00 0000011111 11 2 3 4555543
Q ss_pred ------CCcEEEEeCCCCeeeEeeccCC-------------------------------CCeEEEEEcCCCCcEEEEEeC
Q 010748 288 ------DKQVKIWDVAAGKCNLTLEHHT-------------------------------DKVQAVAWNHHSPQILLSGSF 330 (502)
Q Consensus 288 ------dg~v~vwd~~~~~~~~~~~~h~-------------------------------~~v~~l~~~~~~~~~l~s~s~ 330 (502)
+|.|..+|..+|+.+.++.... .....+++.|.. .+++.++.
T Consensus 171 ~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~-~~vy~~~~ 249 (668)
T 1kv9_A 171 GAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPEL-DLLYVGTG 249 (668)
T ss_dssp CTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTT-TEEEEECC
T ss_pred CCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCC-CEEEEeCC
Confidence 5899999999999988774210 011246777777 67777877
Q ss_pred CC-------------------cEEEEecCCCCCccceEee---------cCCeeEEEeCCCCC--CEEEEEeCCCcEEEE
Q 010748 331 DR-------------------SVVMKDARISTHSGFKWAV---------AADVESLAWDPHAE--HSFVVSLEDGTIKGF 380 (502)
Q Consensus 331 dg-------------------~i~iwd~~~~~~~~~~~~~---------~~~v~~v~~~~~~~--~~~~~~~~dg~v~i~ 380 (502)
++ .|..+|.++++..-..... ..+.....+..++. ..+++++.+|.++++
T Consensus 250 ~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~l 329 (668)
T 1kv9_A 250 NGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVL 329 (668)
T ss_dssp CEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEE
T ss_pred CCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEE
Confidence 66 3899999887754322211 12222222222332 258888999999999
Q ss_pred ECCCCCCCCCCCCCccceEEeccC------------C------------------------CeeEEEEcCCCCCEEEEE-
Q 010748 381 DIRTAKSDPDSTSQQSSFTLHAHD------------K------------------------AVCTISYNPLVPNLLATG- 423 (502)
Q Consensus 381 d~~~~~~~~~~~~~~~~~~~~~h~------------~------------------------~v~~l~~sp~~~~~l~t~- 423 (502)
|..++. .+....... . .-..++++|.. .+++..
T Consensus 330 D~~tG~---------~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~-g~~yv~~ 399 (668)
T 1kv9_A 330 DRTNGK---------LISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGT-GLVYIPY 399 (668)
T ss_dssp ETTTCC---------EEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTT-TEEEEEE
T ss_pred ECCCCC---------EeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCC-CEEEEec
Confidence 998873 221111000 0 01126777765 444431
Q ss_pred -----------------------------------eCCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEE
Q 010748 424 -----------------------------------STDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 468 (502)
Q Consensus 424 -----------------------------------s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg 468 (502)
..+|.|..||+.+++. +.....+ .++....+...+. +++++
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~--~W~~~~~-~~~~~~~~~t~gg-~vf~g 475 (668)
T 1kv9_A 400 QEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKA--AWKVPYP-THWNGGTLSTAGN-LVFQG 475 (668)
T ss_dssp EECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEE--EEEEEES-SSCCCCEEEETTT-EEEEE
T ss_pred cccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcE--EEEccCC-CCCcCceeEeCCC-EEEEE
Confidence 1247899999999884 3333222 2222223334455 57778
Q ss_pred eCCCcEEEEECCCCcccccccc
Q 010748 469 GSKGKLEIWDTLSDAGISNRFS 490 (502)
Q Consensus 469 ~~dg~i~vwd~~~~~~~~~~~~ 490 (502)
+.+|.|++||..+++.+.+.-.
T Consensus 476 ~~dg~l~a~d~~tG~~l~~~~~ 497 (668)
T 1kv9_A 476 TAAGQMHAYSADKGEALWQFEA 497 (668)
T ss_dssp CTTSEEEEEETTTCCEEEEEEC
T ss_pred CCcccchhhhhhcChhheEecC
Confidence 9999999999999998866543
No 250
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.58 E-value=5.4e-05 Score=80.27 Aligned_cols=212 Identities=12% Similarity=0.064 Sum_probs=137.0
Q ss_pred ccceeeEEeccCCCcEEEEEecCCcEEEEeCCCC----eeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCC
Q 010748 266 TDSVLGLAWNKEFRNILASASADKQVKIWDVAAG----KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI 341 (502)
Q Consensus 266 ~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~----~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~ 341 (502)
...+..|+|.+..+.++++-...+.|+.+++... .....+.........|++.+.+.+++++-...+.|.+.++..
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence 3567889999865656666666788999998753 223333333456778999887756777777789999999986
Q ss_pred CCCccceEeecCCeeEEEeCCCCCCEEEEEeCC-CcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEE
Q 010748 342 STHSGFKWAVAADVESLAWDPHAEHSFVVSLED-GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLL 420 (502)
Q Consensus 342 ~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~d-g~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 420 (502)
................|+++|....++++-... +.|...++... .....+...-.....|++.+..+.++
T Consensus 503 ~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~---------~~~~lv~~~l~~P~GLavD~~~~~LY 573 (791)
T 3m0c_C 503 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV---------DIYSLVTENIQWPNGITLDLLSGRLY 573 (791)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---------CEEEEECSSCSCEEEEEEETTTTEEE
T ss_pred CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC---------ceEEEEeCCCCCceEEEEecCCCeEE
Confidence 543332222334588999999766455554333 77888888643 22222223335688999998764555
Q ss_pred EEEeCCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010748 421 ATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 421 ~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~ 488 (502)
++=...+.|..+++.......+...........+|++..+ +|+++-...+.|...+..++..+..+
T Consensus 574 waD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~--~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 574 WVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED--KVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp EEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT--EEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCC--EEEEEECCCCEEEEEeCCCCcceEEe
Confidence 5555667899999977654444333233344667777544 46777777788998988777665444
No 251
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.58 E-value=0.00015 Score=77.83 Aligned_cols=197 Identities=10% Similarity=0.127 Sum_probs=130.7
Q ss_pred ccceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeec-------cCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEe
Q 010748 266 TDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLE-------HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKD 338 (502)
Q Consensus 266 ~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~-------~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd 338 (502)
...|.++...+++. |..|+.. -|.+|+..+++...... .....|.++...++| . |-.|+.++-|..|+
T Consensus 262 ~~~i~~i~~d~~g~--lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g-~-lWigt~~~Gl~~~~ 336 (795)
T 4a2l_A 262 SNYIRSLAMDSQNR--LWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQG-G-MWLGTYFGGLNYYH 336 (795)
T ss_dssp CSBEEEEEECTTSC--EEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTS-C-EEEEESSSCEEEEC
T ss_pred CCeEEEEEEcCCCC--EEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCc-C-EEEEECCCCeEEeC
Confidence 35699999888743 4445555 58999988776543321 123579999999887 4 66788888899998
Q ss_pred cCCCCCccceE------eecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEe---------cc
Q 010748 339 ARISTHSGFKW------AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH---------AH 403 (502)
Q Consensus 339 ~~~~~~~~~~~------~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~---------~h 403 (502)
..+........ -....|.++...+++ .+.+|+.++-|..|+..+.. ...+. ..
T Consensus 337 ~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g--~lWiGt~~~Gl~~~~~~~~~----------~~~~~~~~~~~~~~l~ 404 (795)
T 4a2l_A 337 PIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDK--NLWIGTNDGGLNLYNPITQR----------FTSYTLQEDESARGIG 404 (795)
T ss_dssp GGGGSSEEECCCTTSSSCSCSSEEEEEECTTS--CEEEEESSSCEEEECTTTCC----------EEEECCC------CCS
T ss_pred CCcccceEEcCCCCCCCCCCCeeEEEEECCCC--CEEEEECCCCeEEEcCCCCc----------EEEEecCCCCcccCCC
Confidence 76544322111 123458899888865 47778888889999987641 11111 12
Q ss_pred CCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEec--CCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010748 404 DKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRN--PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 404 ~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~--~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~ 481 (502)
...|.++...+++ .+|..|+.++-|.+||..+++........ .....|.++...+++. +.+ |+. +.|.+|+..+
T Consensus 405 ~~~v~~i~~d~~g-~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lwi-gt~-~Gl~~~~~~~ 480 (795)
T 4a2l_A 405 SNNIKAVYVDEKK-SLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGN-LWL-GTL-SALVRFNPEQ 480 (795)
T ss_dssp CSCEEEEEEETTT-TEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSC-EEE-EES-SCEEEEETTT
T ss_pred CccEEEEEEcCCC-CEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCC-EEE-Eec-CceeEEeCCC
Confidence 3568899888876 64677787777999999887632221100 2345799999999887 333 455 4588999876
Q ss_pred Cc
Q 010748 482 DA 483 (502)
Q Consensus 482 ~~ 483 (502)
+.
T Consensus 481 ~~ 482 (795)
T 4a2l_A 481 RS 482 (795)
T ss_dssp TE
T ss_pred Ce
Confidence 54
No 252
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.57 E-value=9.8e-05 Score=66.78 Aligned_cols=204 Identities=12% Similarity=0.146 Sum_probs=133.7
Q ss_pred CcccceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeecc-CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCC
Q 010748 264 SHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEH-HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS 342 (502)
Q Consensus 264 ~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~ 342 (502)
+-...+..|+|+|+++.++++...++.|...|+. ++.++.+.- -....-.|++.+++ .++++.-.++.+.++++...
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g-~~~vs~E~~~~l~~~~v~~~ 101 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDN-QFVISDERDYAIYVISLTPN 101 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTT-EEEEEETTTTEEEEEEECTT
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCC-EEEEEECCCCcEEEEEcCCC
Confidence 4446799999999866566667788999999987 888877732 23567889998887 66666667788999887665
Q ss_pred CCcc--ceE-------eecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEE-------eccCCC
Q 010748 343 THSG--FKW-------AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-------HAHDKA 406 (502)
Q Consensus 343 ~~~~--~~~-------~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~-------~~h~~~ 406 (502)
.... ... ........++|+|.+.. |+++.+.....+|.+..... ...+..+ ..+...
T Consensus 102 ~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~-L~va~E~~p~~i~~~~g~~~------~~~l~i~~~~~~~~~~~~~d 174 (255)
T 3qqz_A 102 SEVKILKKIKIPLQESPTNCGFEGLAYSRQDHT-FWFFKEKNPIEVYKVNGLLS------SNELHISKDKALQRQFTLDD 174 (255)
T ss_dssp CCEEEEEEEECCCSSCCCSSCCEEEEEETTTTE-EEEEEESSSEEEEEEESTTC------SSCCEEEECHHHHHTCCSSC
T ss_pred CeeeeeeeeccccccccccCCcceEEEeCCCCE-EEEEECcCCceEEEEccccc------CCceeeecchhhccccccCC
Confidence 4311 111 12345689999998764 44455444444554431100 0111111 113346
Q ss_pred eeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCC-------CCcEEEEEEcCCCCcEEEEEeCCCcEEEEEC
Q 010748 407 VCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPK-------AGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 479 (502)
Q Consensus 407 v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~-------~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~ 479 (502)
+.+++++|..+.+++.....+.|.++|.... +.....+... ...--.|+|.++|. ++++ +.-+.++++.-
T Consensus 175 ~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 175 VSGAEFNQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIV-SEPNRFYRFTP 251 (255)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEE-ETTTEEEEEEC
T ss_pred ceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEE-cCCceEEEEEe
Confidence 7999999987677777777888999997754 5555555521 12568999999997 4554 66666666643
No 253
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.55 E-value=7.5e-05 Score=70.53 Aligned_cols=209 Identities=10% Similarity=0.091 Sum_probs=136.1
Q ss_pred cceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeee-EeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCc
Q 010748 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCN-LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS 345 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~-~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~ 345 (502)
..+.+|+|.+..+.++.+-...+.|..+++..+... ..+...-.....+++.+.+..++++-...+.|.++++......
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 114 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 114 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE
Confidence 456789999875656666677789999998766321 2222223456788888766466777677889999998764433
Q ss_pred cceEeecCCeeEEEeCCCCCCEEEEEe-CCCcEEEEECCCCCCCCCCCCCccceEE-eccCCCeeEEEEcCCCCCEEEEE
Q 010748 346 GFKWAVAADVESLAWDPHAEHSFVVSL-EDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLLATG 423 (502)
Q Consensus 346 ~~~~~~~~~v~~v~~~~~~~~~~~~~~-~dg~v~i~d~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l~t~ 423 (502)
............++++|.+..++++-. ..+.|..+++... ....+ ...-...+.|+++|.+..+.++-
T Consensus 115 ~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~----------~~~~~~~~~l~~Pnglavd~~~~~lY~aD 184 (318)
T 3sov_A 115 VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS----------SRFIIINSEIYWPNGLTLDYEEQKLYWAD 184 (318)
T ss_dssp EEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC----------SCEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred EEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC----------CeEEEEECCCCCccEEEEeccCCEEEEEE
Confidence 222233455788999987664444432 3578888887643 12222 22234568999999764666666
Q ss_pred eCCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccc
Q 010748 424 STDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 424 s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
+..+.|..+++.......+. .........+++..+ .++.+-...+.|..++..+++.+..+.
T Consensus 185 ~~~~~I~~~d~dG~~~~~~~--~~~~~~P~glav~~~--~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 185 AKLNFIHKSNLDGTNRQAVV--KGSLPHPFALTLFED--ILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp TTTTEEEEEETTSCSCEEEE--CSCCSCEEEEEEETT--EEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCCEEEEEcCCCCceEEEe--cCCCCCceEEEEeCC--EEEEEecCCCeEEEEECCCCCceEEEe
Confidence 67788999999765432232 223455778888644 367777777899999998777654443
No 254
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.55 E-value=9.1e-06 Score=73.21 Aligned_cols=180 Identities=7% Similarity=-0.004 Sum_probs=122.4
Q ss_pred ceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeE--EEEEcCCCCcEEEEEeCCCcEEEEecCCCCCc
Q 010748 268 SVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQ--AVAWNHHSPQILLSGSFDRSVVMKDARISTHS 345 (502)
Q Consensus 268 ~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~--~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~ 345 (502)
-...|.|+. +.++.+.+.+|.|+++|+.+++.+.++ - ..... .+.+. +..+.++.-.++.+.+||..+.+..
T Consensus 56 ftqGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~ 129 (268)
T 3nok_A 56 FTQGLVFHQ--GHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRE 129 (268)
T ss_dssp CEEEEEEET--TEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEE
T ss_pred ccceEEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEE
Confidence 347888874 468888888899999999999988887 2 23333 35554 4366666777899999999987766
Q ss_pred cceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEec--cCC---CeeEEEEcCCCCCEE
Q 010748 346 GFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA--HDK---AVCTISYNPLVPNLL 420 (502)
Q Consensus 346 ~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~--h~~---~v~~l~~sp~~~~~l 420 (502)
.. +.....-..+++ ++. .++.+..++.|.++|..+. +.+.++.. +.. .++.+.|. +| .+.
T Consensus 130 ~t-i~~~~eGwGLt~--Dg~-~L~vSdGs~~l~~iDp~T~---------~v~~~I~V~~~g~~v~~lNeLe~~-dG-~ly 194 (268)
T 3nok_A 130 RT-TRYSGEGWGLCY--WNG-KLVRSDGGTMLTFHEPDGF---------ALVGAVQVKLRGQPVELINELECA-NG-VIY 194 (268)
T ss_dssp EE-EECSSCCCCEEE--ETT-EEEEECSSSEEEEECTTTC---------CEEEEEECEETTEECCCEEEEEEE-TT-EEE
T ss_pred EE-EeCCCceeEEec--CCC-EEEEECCCCEEEEEcCCCC---------eEEEEEEeCCCCcccccccccEEe-CC-EEE
Confidence 53 333333345554 344 5666667899999999886 44444433 222 34667776 44 555
Q ss_pred EEEeCCCcEEEEECCCCCeeEEEEecC-----------CCCcEEEEEEcCCCCcEEEEE
Q 010748 421 ATGSTDKMVKLWDLSNNQPSCIASRNP-----------KAGAVFSVAFSEDSPFVLAIG 468 (502)
Q Consensus 421 ~t~s~dg~i~vwd~~~~~~~~~~~~~~-----------~~~~v~~~~~spd~~~ll~sg 468 (502)
+..-....|.+.|..+++......+.+ .....+.|+|+|++..+++||
T Consensus 195 anvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 195 ANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 555568889999999998544444321 123578999999887667765
No 255
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.54 E-value=1.5e-05 Score=71.71 Aligned_cols=181 Identities=10% Similarity=0.068 Sum_probs=119.9
Q ss_pred ceeeEEeccCCCcEEEEEecCC--cEEEEeCCCCeeeEeeccCCCCeE--EEEEcCCCCcEEEEEeCCCcEEEEecCCCC
Q 010748 268 SVLGLAWNKEFRNILASASADK--QVKIWDVAAGKCNLTLEHHTDKVQ--AVAWNHHSPQILLSGSFDRSVVMKDARIST 343 (502)
Q Consensus 268 ~V~~l~~~~~~~~~l~sgs~dg--~v~vwd~~~~~~~~~~~~h~~~v~--~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~ 343 (502)
-...|.|+ + +.++.+.+.+| .|+++|+.+++.+.++.... ... .+.. .+..+.++.-.++.+.+||..+.+
T Consensus 44 ftqGL~~~-~-~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~--~g~~ly~ltw~~~~v~v~D~~t~~ 118 (262)
T 3nol_A 44 FTEGFFYR-N-GYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISD--WKDKIVGLTWKNGLGFVWNIRNLR 118 (262)
T ss_dssp EEEEEEEE-T-TEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEE--ETTEEEEEESSSSEEEEEETTTCC
T ss_pred ccceEEEE-C-CEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEE--eCCEEEEEEeeCCEEEEEECccCc
Confidence 34788898 4 45777777766 89999999999988886433 332 3444 343555666678999999999887
Q ss_pred CccceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEecc--C---CCeeEEEEcCCCCC
Q 010748 344 HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH--D---KAVCTISYNPLVPN 418 (502)
Q Consensus 344 ~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h--~---~~v~~l~~sp~~~~ 418 (502)
.... +.....-..+++ ++. .++.+..++.|.++|..+. +.+.++... . ..++.+.|. ++ .
T Consensus 119 ~~~t-i~~~~eG~glt~--dg~-~L~~SdGs~~i~~iDp~T~---------~v~~~I~V~~~g~~~~~lNELe~~-~G-~ 183 (262)
T 3nol_A 119 QVRS-FNYDGEGWGLTH--NDQ-YLIMSDGTPVLRFLDPESL---------TPVRTITVTAHGEELPELNELEWV-DG-E 183 (262)
T ss_dssp EEEE-EECSSCCCCEEE--CSS-CEEECCSSSEEEEECTTTC---------SEEEEEECEETTEECCCEEEEEEE-TT-E
T ss_pred EEEE-EECCCCceEEec--CCC-EEEEECCCCeEEEEcCCCC---------eEEEEEEeccCCccccccceeEEE-CC-E
Confidence 6653 333333334444 455 4555555788999999886 444444432 2 334557776 44 5
Q ss_pred EEEEEeCCCcEEEEECCCCCeeEEEEecCC----------CCcEEEEEEcCCCCcEEEEE
Q 010748 419 LLATGSTDKMVKLWDLSNNQPSCIASRNPK----------AGAVFSVAFSEDSPFVLAIG 468 (502)
Q Consensus 419 ~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~----------~~~v~~~~~spd~~~ll~sg 468 (502)
+.+..-.++.|.+.|..+++......+.+- ....+.++|+|++..++++|
T Consensus 184 lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 184 IFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp EEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred EEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 555555688999999999986554444311 23568999999988666655
No 256
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.53 E-value=5e-06 Score=87.20 Aligned_cols=277 Identities=10% Similarity=-0.005 Sum_probs=141.4
Q ss_pred cccccC-CCceEEEEEecCCc------ceeEEEEEecCCCCCCCeeeeeccccCCCcce--eeeecCCCCCCCCCCEEEE
Q 010748 144 DMTINP-NDAVIVCARNEDDV------SHLEVYILEESDGGDPNLYVHHHIIIPAFPLC--MAWLDCPLKDREKGNFMAV 214 (502)
Q Consensus 144 ~~~~~p-~~~~l~~~~~~~~~------~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~la~ 214 (502)
.+++.| ++++++.|+...+. ..-.++.|+.....-..+. ....+....| ... ..+++++++
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~---~~~~~~~~~~~~~~~-------~~~g~lyv~ 259 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRT---VTVTKHDMFCPGISM-------DGNGQIVVT 259 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCE---EEECSCCCSSCEEEE-------CTTSCEEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCc---ccCCCCCCccccccC-------CCCCCEEEe
Confidence 556677 88888888754421 2236788876665211111 1111111122 222 468999999
Q ss_pred ecC-CCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEe-cC----
Q 010748 215 GSM-EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS-AD---- 288 (502)
Q Consensus 215 g~~-dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs-~d---- 288 (502)
|+. +..+++||..+..- .. ...+. ....-.+++..++ +.+++.|+ .+
T Consensus 260 GG~~~~~v~~yd~~t~~W-~~------------------------~~~~~-~~R~~~s~~~~~d-g~iyv~GG~~~~~~~ 312 (656)
T 1k3i_A 260 GGNDAKKTSLYDSSSDSW-IP------------------------GPDMQ-VARGYQSSATMSD-GRVFTIGGSWSGGVF 312 (656)
T ss_dssp CSSSTTCEEEEEGGGTEE-EE------------------------CCCCS-SCCSSCEEEECTT-SCEEEECCCCCSSSC
T ss_pred CCCCCCceEEecCcCCce-eE------------------------CCCCC-ccccccceEEecC-CeEEEEeCcccCCcc
Confidence 985 46899999864210 00 00000 0111123444556 45777777 34
Q ss_pred -CcEEEEeCCCCeeeEee----ccCCCCeEEEEEcCCCCcEEEEEeCCC---------cEEEEecCCCCCccceEeec--
Q 010748 289 -KQVKIWDVAAGKCNLTL----EHHTDKVQAVAWNHHSPQILLSGSFDR---------SVVMKDARISTHSGFKWAVA-- 352 (502)
Q Consensus 289 -g~v~vwd~~~~~~~~~~----~~h~~~v~~l~~~~~~~~~l~s~s~dg---------~i~iwd~~~~~~~~~~~~~~-- 352 (502)
..+.+||..+++-...- ......-....+..++ .+++.|+.+| .+..||..+..-........
T Consensus 313 ~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~-~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~ 391 (656)
T 1k3i_A 313 EKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDN-HAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSN 391 (656)
T ss_dssp CCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTC-SCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEET
T ss_pred cccceEeCCCCCcceeCCCccccccccccccceeecCC-ceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccc
Confidence 57999999887643320 0000000001122333 4555565544 46778877654222111111
Q ss_pred -------CCeeEEEeCCCCCCEEEEEeCCC-----------cEEEEECCCCCCCCCCCCCccceEE---eccCCC-eeEE
Q 010748 353 -------ADVESLAWDPHAEHSFVVSLEDG-----------TIKGFDIRTAKSDPDSTSQQSSFTL---HAHDKA-VCTI 410 (502)
Q Consensus 353 -------~~v~~v~~~~~~~~~~~~~~~dg-----------~v~i~d~~~~~~~~~~~~~~~~~~~---~~h~~~-v~~l 410 (502)
..-.++.|...+..++++|+.++ .|.+||..+. . .... ..+... -.++
T Consensus 392 ~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~---------~-W~~~~~~~mp~~R~~~~~ 461 (656)
T 1k3i_A 392 RGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTS---------P-NTVFASNGLYFARTFHTS 461 (656)
T ss_dssp TEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSC---------C-EEEECTTCCSSCCBSCEE
T ss_pred cccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCC---------C-eeEEccCCCCCCcccCCe
Confidence 12344555443455777776432 5677776653 1 1111 112222 2344
Q ss_pred EEcCCCCCEEEEEeCC-----------CcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeC
Q 010748 411 SYNPLVPNLLATGSTD-----------KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGS 470 (502)
Q Consensus 411 ~~sp~~~~~l~t~s~d-----------g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~ 470 (502)
...|++ .+++.|+.+ ..+.+||..+.+...+...........++.+.|+++ +++.||.
T Consensus 462 ~~l~~g-~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~-v~v~GG~ 530 (656)
T 1k3i_A 462 VVLPDG-STFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGR-VFNGGGG 530 (656)
T ss_dssp EECTTS-CEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSC-EEEEECC
T ss_pred EECCCC-CEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcE-EEecCCC
Confidence 566777 888888754 458999998776433222222222233456679998 6888885
No 257
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.50 E-value=0.00019 Score=68.81 Aligned_cols=241 Identities=10% Similarity=0.006 Sum_probs=142.1
Q ss_pred ccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCC-CCCEEEEecCCC
Q 010748 141 DLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDRE-KGNFMAVGSMEP 219 (502)
Q Consensus 141 ~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~la~g~~dg 219 (502)
...+....+. .+|+.+... .|+.++.... .+.... .....|..++| ++ ++.++.+-...+
T Consensus 35 ~~~C~~~~~~-~~ll~~~~~------~I~~i~~~g~---~~~~~~--~~~~~~~~l~~-------d~~~~~ly~~D~~~~ 95 (349)
T 3v64_C 35 RRSCKALGPE-PVLLFANRI------DIRQVLPHRS---EYTLLL--NNLENAIALDF-------HHRRELVFWSDVTLD 95 (349)
T ss_dssp SSCEEESSSC-CEEEEECBS------CEEEECTTSC---CEEEEE--CSCSCEEEEEE-------ETTTTEEEEEETTTT
T ss_pred CCcccccccC-ceeEeeccc------ceEEEeCCCC---eeEEee--cCCCceEEEEE-------eccccEEEEEeccCC
Confidence 3455555663 445444432 4555554432 211111 11233566776 44 455555656678
Q ss_pred cEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeCCCC
Q 010748 220 AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG 299 (502)
Q Consensus 220 ~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~ 299 (502)
.|+.++++...... ...........|++.+.+++++++-...+.|.+.++...
T Consensus 96 ~I~r~~~~g~~~~~---------------------------~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~ 148 (349)
T 3v64_C 96 RILRANLNGSNVEE---------------------------VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA 148 (349)
T ss_dssp EEEEEETTSCSCEE---------------------------EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ceEEEecCCCCceE---------------------------EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCC
Confidence 89989886432100 001112345778888765767777777789999998754
Q ss_pred eeeEeeccCCCCeEEEEEcCCCCcEEEEEeCC-CcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEEEEEeCCCcEE
Q 010748 300 KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD-RSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 378 (502)
Q Consensus 300 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~d-g~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~ 378 (502)
.....+...-.....+++.|.+..++++-... +.|..+++............-.....++++|.+..++++-...+.|.
T Consensus 149 ~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~ 228 (349)
T 3v64_C 149 HRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIE 228 (349)
T ss_dssp SCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred ceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEE
Confidence 43333333345678999999774666665555 78888888754433221122345788999987776666667778899
Q ss_pred EEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCC
Q 010748 379 GFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 438 (502)
Q Consensus 379 i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~ 438 (502)
.+++... .....+........++++. .+ .++++-...+.|..++..+++
T Consensus 229 ~~~~dG~---------~~~~~~~~~~~~P~giav~-~~-~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 229 RANLDGS---------HRKAVISQGLPHPFAITVF-ED-SLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp EEETTSC---------SCEEEECSSCSSEEEEEEE-TT-EEEEEETTTTEEEEEETTTCC
T ss_pred EEeCCCC---------ceEEEEeCCCCCceEEEEE-CC-EEEEecCCCCeEEEEEccCCC
Confidence 9998643 2222222234456777774 23 666666677888888855544
No 258
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.48 E-value=0.00015 Score=77.82 Aligned_cols=279 Identities=10% Similarity=0.137 Sum_probs=165.5
Q ss_pred cccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeec-cccCCCcceeeeecCCCCCCCCCCEEEEecCCCc
Q 010748 142 LEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHH-IIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPA 220 (502)
Q Consensus 142 v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~dg~ 220 (502)
|.++...+++++.++.. + .|+.|+.... .+..... ........++.. .++++ |.+|+.++-
T Consensus 133 i~~i~~d~~g~lwi~t~--~-----gl~~~~~~~~---~~~~~~~~~~~~~~i~~i~~-------d~~g~-lwigt~~~G 194 (795)
T 4a2l_A 133 VNGIEEISPEQLLISTP--E-----GLIMFDIKES---KFIDDSFSTAMHKTIASTLY-------RQGDQ-IYIGTSTDG 194 (795)
T ss_dssp CCEEEEEETTEEEEEET--T-----EEEEEETTTT---EEECSSSCHHHHTCCEEEEE-------EETTE-EEEEESSSC
T ss_pred EEEEEECCCCCEEEEEC--C-----ceEEEECCCC---EEEeccCCCCCCcceEEEEE-------CCCCC-EEEEECCCC
Confidence 77888888888776543 3 5677775543 2221110 000000122221 23454 444666555
Q ss_pred EEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeCCCCe
Q 010748 221 IEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK 300 (502)
Q Consensus 221 I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~ 300 (502)
|..|+........ . ....+...|.++...++ + .|..|+.++-|.+||..+++
T Consensus 195 l~~~~~~~~~~~~------------------------~--~~~~~~~~i~~i~~d~~-g-~lwigt~~~Gl~~~~~~~~~ 246 (795)
T 4a2l_A 195 LYTYSITQKTFEK------------------------V--IPILGTKQIQAILQQSP-T-RIWVATEGAGLFLINPKTKE 246 (795)
T ss_dssp EEEEETTTCCEEE------------------------C--C----CCCEEEEEEEET-T-EEEEEEBSSCEEEEETTTTE
T ss_pred EEEEeCCCCeEEE------------------------e--cCCCCCCeeEEEEEcCC-C-CEEEEECCCCeEEEeCCCCe
Confidence 8888875422100 0 00113456888888776 3 35556655559999988776
Q ss_pred eeEeecc-------CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceE-------eecCCeeEEEeCCCCCC
Q 010748 301 CNLTLEH-------HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-------AVAADVESLAWDPHAEH 366 (502)
Q Consensus 301 ~~~~~~~-------h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~v~~~~~~~~ 366 (502)
....... ....|.++...+++ . |..|+.. -|.+|+..+........ -....|.++...+++.
T Consensus 247 ~~~~~~~~~~~~~l~~~~i~~i~~d~~g-~-lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~- 322 (795)
T 4a2l_A 247 IKNYLHSPSNPKSISSNYIRSLAMDSQN-R-LWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG- 322 (795)
T ss_dssp EEEECCCTTCTTSCSCSBEEEEEECTTS-C-EEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-
T ss_pred EEEeecCCCCccccCCCeEEEEEEcCCC-C-EEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-
Confidence 5433221 23569999998887 4 4455555 58889877654322110 1235689999988664
Q ss_pred EEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEe-------ccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCe
Q 010748 367 SFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH-------AHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 439 (502)
Q Consensus 367 ~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~-------~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~ 439 (502)
+.+|+.++-|..|+..... ...+. .....|.++...+++ .|..|+.++-|..|+..+++.
T Consensus 323 -lWigt~~~Gl~~~~~~~~~----------~~~~~~~~~~~~l~~~~V~~i~~d~~g--~lWiGt~~~Gl~~~~~~~~~~ 389 (795)
T 4a2l_A 323 -MWLGTYFGGLNYYHPIRNR----------FKNIRNIPYKNSLSDNVVSCIVEDKDK--NLWIGTNDGGLNLYNPITQRF 389 (795)
T ss_dssp -EEEEESSSCEEEECGGGGS----------SEEECCCTTSSSCSCSSEEEEEECTTS--CEEEEESSSCEEEECTTTCCE
T ss_pred -EEEEECCCCeEEeCCCccc----------ceEEcCCCCCCCCCCCeeEEEEECCCC--CEEEEECCCCeEEEcCCCCcE
Confidence 7788888889999876431 11111 123568899888865 355677777799999887653
Q ss_pred eEEEEe------cCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcc
Q 010748 440 SCIASR------NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 484 (502)
Q Consensus 440 ~~~~~~------~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~ 484 (502)
...... ......|.++...+++. +|..|+.++.|.+|+..++..
T Consensus 390 ~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-~lWigt~~~Gl~~~d~~~~~~ 439 (795)
T 4a2l_A 390 TSYTLQEDESARGIGSNNIKAVYVDEKKS-LVYIGTHAGGLSILHRNSGQV 439 (795)
T ss_dssp EEECCC------CCSCSCEEEEEEETTTT-EEEEEETTTEEEEEETTTCCE
T ss_pred EEEecCCCCcccCCCCccEEEEEEcCCCC-EEEEEeCcCceeEEeCCCCcE
Confidence 222111 11235799999988887 355677777899999887653
No 259
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.47 E-value=4.6e-05 Score=67.99 Aligned_cols=183 Identities=12% Similarity=0.073 Sum_probs=120.5
Q ss_pred cceeeEEeccCCCcEEEEEecCC--cEEEEeCCCCeeeEeeccCCCC-eEEEEEcCCCCcEEEEEeCCCcEEEEecCCCC
Q 010748 267 DSVLGLAWNKEFRNILASASADK--QVKIWDVAAGKCNLTLEHHTDK-VQAVAWNHHSPQILLSGSFDRSVVMKDARIST 343 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~dg--~v~vwd~~~~~~~~~~~~h~~~-v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~ 343 (502)
.-...|.|++ +.++.+.+..| .|+++|+.+++.+.++...... -..+... +.++....-.++.+.+||..+.+
T Consensus 21 ~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~ 96 (243)
T 3mbr_X 21 AFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLT 96 (243)
T ss_dssp CCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTE
T ss_pred cccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCc
Confidence 4466899986 34666666654 8999999999998887543221 1334443 33566666778999999999877
Q ss_pred CccceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEec--cC---CCeeEEEEcCCCCC
Q 010748 344 HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA--HD---KAVCTISYNPLVPN 418 (502)
Q Consensus 344 ~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~--h~---~~v~~l~~sp~~~~ 418 (502)
.... +.....-..+++ ++. .++++..++.|.++|..+. +.+.++.. +. ..++.+.+. ++ .
T Consensus 97 ~~~t-i~~~~~Gwglt~--dg~-~L~vSdgs~~l~~iDp~t~---------~~~~~I~V~~~g~~~~~lNeLe~~-~G-~ 161 (243)
T 3mbr_X 97 PRAR-FRYPGEGWALTS--DDS-HLYMSDGTAVIRKLDPDTL---------QQVGSIKVTAGGRPLDNLNELEWV-NG-E 161 (243)
T ss_dssp EEEE-EECSSCCCEEEE--CSS-CEEEECSSSEEEEECTTTC---------CEEEEEECEETTEECCCEEEEEEE-TT-E
T ss_pred EEEE-EeCCCCceEEee--CCC-EEEEECCCCeEEEEeCCCC---------eEEEEEEEccCCcccccceeeEEe-CC-E
Confidence 6553 333344445554 344 4555666889999999886 44444443 22 244566665 33 5
Q ss_pred EEEEEeCCCcEEEEECCCCCeeEEEEecC-----------CCCcEEEEEEcCCCCcEEEEE
Q 010748 419 LLATGSTDKMVKLWDLSNNQPSCIASRNP-----------KAGAVFSVAFSEDSPFVLAIG 468 (502)
Q Consensus 419 ~l~t~s~dg~i~vwd~~~~~~~~~~~~~~-----------~~~~v~~~~~spd~~~ll~sg 468 (502)
+.+..-....|.+.|..+++......+.+ .....+.++++|++..+++||
T Consensus 162 lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 162 LLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 55555467889999999998544444331 123578999999887666665
No 260
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.46 E-value=1.3e-06 Score=91.89 Aligned_cols=210 Identities=13% Similarity=0.090 Sum_probs=128.8
Q ss_pred cceeeEEeccCCCcEEEEEecCCcEEEEeCCC----CeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCC
Q 010748 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAA----GKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS 342 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~----~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~ 342 (502)
..+..|+|.+..+.++++-...+.|+.+++.. ......+.........|++.+.+.+++++-...+.|.++++...
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 35678899987554555555668899999875 22222222222345678888665466666667789999998765
Q ss_pred CCccceEeecCCeeEEEeCCCCCCEEEEEeCC-CcEEEEECCCCCCCCCCCCCccceEE-eccCCCeeEEEEcCCCCCEE
Q 010748 343 THSGFKWAVAADVESLAWDPHAEHSFVVSLED-GTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLL 420 (502)
Q Consensus 343 ~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~d-g~v~i~d~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l 420 (502)
...............++++|.+..++++-... +.|..+++... ....+ ...-.....|+|+|.+..++
T Consensus 486 ~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~----------~~~~l~~~~l~~PnGlavd~~~~~LY 555 (699)
T 1n7d_A 486 KRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV----------DIYSLVTENIQWPNGITLDLLSGRLY 555 (699)
T ss_dssp CEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC----------CCCEESCSSCSSCCCEEECTTTCCEE
T ss_pred ceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC----------CeeEEEeCCCCCccEEEEeccCCEEE
Confidence 43221111224567889998766555544333 67877776532 11112 12234567899999875777
Q ss_pred EEEeCCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010748 421 ATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 421 ~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~ 488 (502)
++-+..+.|.++++.......+............|++..+ +++++....+.|..++..+++.+..+
T Consensus 556 ~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~--~lywtd~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 556 WVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED--KVFWTDIINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp EEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT--EEEEECSTTTCEEEEETTTEEEEECC
T ss_pred EEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC--EEEEEeCCCCeEEEEEccCCCceEEe
Confidence 7777788899999976543333222222233445666554 46777777789999998877765544
No 261
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.44 E-value=0.00013 Score=70.91 Aligned_cols=202 Identities=10% Similarity=0.008 Sum_probs=126.3
Q ss_pred CcceeeeecCCCCCCC-CCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCccccee
Q 010748 192 FPLCMAWLDCPLKDRE-KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVL 270 (502)
Q Consensus 192 ~~~~~~~~~~~~~~s~-~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~ 270 (502)
.|..++| .+ ++.++.+-...+.|+.++++.... .. ..........
T Consensus 117 ~~~gl~~-------d~~~~~ly~~D~~~~~I~r~~~~g~~~-~~--------------------------~~~~~~~~p~ 162 (386)
T 3v65_B 117 NAIALDF-------HHRRELVFWSDVTLDRILRANLNGSNV-EE--------------------------VVSTGLESPG 162 (386)
T ss_dssp CEEEEEE-------ETTTTEEEEEETTTTEEEEEETTSCCE-EE--------------------------EECSSCSCCC
T ss_pred ccEEEEE-------ecCCCeEEEEeCCCCcEEEEecCCCCc-EE--------------------------EEeCCCCCcc
Confidence 4566777 44 455556666678899998864221 00 0011123456
Q ss_pred eEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCC-CcEEEEecCCCCCccceE
Q 010748 271 GLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD-RSVVMKDARISTHSGFKW 349 (502)
Q Consensus 271 ~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~d-g~i~iwd~~~~~~~~~~~ 349 (502)
.|++.+.+++++++-...+.|.+.++........+...-.....|++.|.+..++++-... +.|..+++..........
T Consensus 163 glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~ 242 (386)
T 3v65_B 163 GLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD 242 (386)
T ss_dssp CEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred EEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEE
Confidence 7888876566777777778899998875443333333345678999999774555555455 778888876544332111
Q ss_pred eecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcE
Q 010748 350 AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMV 429 (502)
Q Consensus 350 ~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i 429 (502)
..-.....++|+|.+..++++-+..+.|..+++... .....+........+|++.. + .++++-...+.|
T Consensus 243 ~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~---------~~~~~~~~~~~~P~giav~~-~-~ly~td~~~~~V 311 (386)
T 3v65_B 243 THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS---------HRKAVISQGLPHPFAITVFE-D-SLYWTDWHTKSI 311 (386)
T ss_dssp SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC---------SCEEEECSSCSSEEEEEEET-T-EEEEEETTTTEE
T ss_pred CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC---------eeEEEEECCCCCceEEEEEC-C-EEEEeeCCCCeE
Confidence 223357889999877766666677788999998643 22222222344567777743 3 677777778889
Q ss_pred EEEECCCCC
Q 010748 430 KLWDLSNNQ 438 (502)
Q Consensus 430 ~vwd~~~~~ 438 (502)
..++..+++
T Consensus 312 ~~~~~~~G~ 320 (386)
T 3v65_B 312 NSANKFTGK 320 (386)
T ss_dssp EEEETTTCC
T ss_pred EEEECCCCc
Confidence 999865554
No 262
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.41 E-value=6.9e-05 Score=76.93 Aligned_cols=242 Identities=10% Similarity=0.021 Sum_probs=136.6
Q ss_pred CCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEec
Q 010748 208 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA 287 (502)
Q Consensus 208 ~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~ 287 (502)
.+..|++++.++.|..+|..+++.+.....-. . .........++ .. + + .++.++.
T Consensus 114 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~----------------~--~~~~~~~~~P~----v~-~-g-~v~vg~~ 168 (571)
T 2ad6_A 114 GAGQIVKKQANGHLLALDAKTGKINWEVEVCD----------------P--KVGSTLTQAPF----VA-K-D-TVLMGCS 168 (571)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC----------------G--GGTCBCCSCCE----EE-T-T-EEEEECB
T ss_pred ECCEEEEEeCCCEEEEEECCCCCEEEEecCCC----------------C--CccceeccCCE----EE-C-C-EEEEEec
Confidence 36678888889999999998776543221100 0 00000011111 11 2 3 4555554
Q ss_pred ------CCcEEEEeCCCCeeeEeeccCCCC-------------------------------------e-EEEEEcCCCCc
Q 010748 288 ------DKQVKIWDVAAGKCNLTLEHHTDK-------------------------------------V-QAVAWNHHSPQ 323 (502)
Q Consensus 288 ------dg~v~vwd~~~~~~~~~~~~h~~~-------------------------------------v-~~l~~~~~~~~ 323 (502)
++.|..+|..+|+.+.++...... + ..+++.+.. .
T Consensus 169 ~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~-g 247 (571)
T 2ad6_A 169 GAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKL-N 247 (571)
T ss_dssp CGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTT-T
T ss_pred CCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCC-C
Confidence 789999999999988776432110 0 124555655 4
Q ss_pred EEEEEeCC----------------CcEEEEecCCCCCccceEeec---------CCeeEEEeCCCCC--CEEEEEeCCCc
Q 010748 324 ILLSGSFD----------------RSVVMKDARISTHSGFKWAVA---------ADVESLAWDPHAE--HSFVVSLEDGT 376 (502)
Q Consensus 324 ~l~s~s~d----------------g~i~iwd~~~~~~~~~~~~~~---------~~v~~v~~~~~~~--~~~~~~~~dg~ 376 (502)
.++.++.+ +.|..+|.++++..-...... ....-+...+++. .+++.++.+|.
T Consensus 248 ~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~ 327 (571)
T 2ad6_A 248 LFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGI 327 (571)
T ss_dssp EEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSE
T ss_pred eEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcE
Confidence 55555432 358899998876532211110 0111112222332 35777889999
Q ss_pred EEEEECCCCCCCCCCCCCccceEEeccC-------------CCe--------------------------eEEEEcCCCC
Q 010748 377 IKGFDIRTAKSDPDSTSQQSSFTLHAHD-------------KAV--------------------------CTISYNPLVP 417 (502)
Q Consensus 377 v~i~d~~~~~~~~~~~~~~~~~~~~~h~-------------~~v--------------------------~~l~~sp~~~ 417 (502)
++++|..++ +.++...... .++ ..++++|..
T Consensus 328 l~~lD~~tG---------~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~- 397 (571)
T 2ad6_A 328 LYTLNRENG---------NLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPES- 397 (571)
T ss_dssp EEEEETTTC---------CEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT-
T ss_pred EEEEECCCC---------CEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCC-
Confidence 999999887 3333332111 011 246778876
Q ss_pred CEEEEEe-------------------------------------CCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCC
Q 010748 418 NLLATGS-------------------------------------TDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSED 460 (502)
Q Consensus 418 ~~l~t~s-------------------------------------~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd 460 (502)
.+|+..+ .+|.|..||+.+++. +...... ..+.+..+...
T Consensus 398 g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~--~W~~~~~-~~~~~~~~~t~ 474 (571)
T 2ad6_A 398 RTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKA--KWTKWEK-FAAWGGTLYTK 474 (571)
T ss_dssp TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCE--EEEEEES-SCCCSBCEEET
T ss_pred CEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCE--EEEecCC-CCccceeEEEC
Confidence 5555543 357899999998874 3332211 12222222223
Q ss_pred CCcEEEEEeCCCcEEEEECCCCccccccc
Q 010748 461 SPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 461 ~~~ll~sg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
+. ++.+++.+|.|+.||..+++.+.+.-
T Consensus 475 gg-~v~~g~~dg~l~a~D~~tG~~lw~~~ 502 (571)
T 2ad6_A 475 GG-LVWYATLDGYLKALDNKDGKELWNFK 502 (571)
T ss_dssp TT-EEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CC-EEEEEcCCCeEEEEECCCCCEEEEEe
Confidence 44 46668999999999999999886544
No 263
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.40 E-value=0.0002 Score=76.16 Aligned_cols=254 Identities=7% Similarity=-0.010 Sum_probs=133.4
Q ss_pred cccccccc-CCCceEEEEEecCCcceeEEEEEecCCC-CCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCC
Q 010748 141 DLEDMTIN-PNDAVIVCARNEDDVSHLEVYILEESDG-GDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSME 218 (502)
Q Consensus 141 ~v~~~~~~-p~~~~l~~~~~~~~~~~l~v~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~d 218 (502)
.+....|| |+|++||.+..........||+++...+ . .+. ..+.+....+.|+|+|+.|+....+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~--~l~-----------~~~~~~~~~~~WspDg~~l~y~~~d 241 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQ--TIA-----------DKVSGTNGEIVWGPDHTSLFYVTKD 241 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTC--CCC-----------CCEEEECSCCEECSSTTEEEEEEEC
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCE--eCC-----------ccccCceeeEEEecCCCEEEEEEEC
Confidence 56778999 9999999887653222346777775543 2 110 0111222234448999888877665
Q ss_pred -----CcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEec--CCcE
Q 010748 219 -----PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA--DKQV 291 (502)
Q Consensus 219 -----g~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~--dg~v 291 (502)
..|.++++.+...... .+ .. ..+......+.|+|+++.++++... ...|
T Consensus 242 ~~~~~~~v~~~~lgt~~~~~~-lv----------------------~~-~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l 297 (751)
T 2xe4_A 242 ETLRENKVWRHVMGKLQSEDV-CL----------------------YE-EHNPLFSAFMYKAADTNTLCIGSQSPETAEV 297 (751)
T ss_dssp TTCCEEEEEEEETTSCGGGCE-EE----------------------EE-CCCTTCEEEEEECTTSSEEEEEEECSSCEEE
T ss_pred CCCCCCEEEEEECCCCchhcE-EE----------------------Ee-cCCCceEEEEEECCCCCEEEEEecCCCCceE
Confidence 2577777754321100 00 00 0122345678999996644444432 3458
Q ss_pred EEEeCCCC--ee-eEee-ccCCCCeEEEEEcCCCCcEEEEEeCC----CcEEEEecCCCCCccc-eEeecC--CeeEEEe
Q 010748 292 KIWDVAAG--KC-NLTL-EHHTDKVQAVAWNHHSPQILLSGSFD----RSVVMKDARISTHSGF-KWAVAA--DVESLAW 360 (502)
Q Consensus 292 ~vwd~~~~--~~-~~~~-~~h~~~v~~l~~~~~~~~~l~s~s~d----g~i~iwd~~~~~~~~~-~~~~~~--~v~~v~~ 360 (502)
.++|+.++ +. +..+ ........++.|+..+ .+++.+..+ ..|..+++.++..... ...+.. .+..+.+
T Consensus 298 ~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~-~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~ 376 (751)
T 2xe4_A 298 HLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTS-HLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAV 376 (751)
T ss_dssp EEEESSSCTTCCCEEESSCCCTTCCEEEEEETTT-EEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEE
T ss_pred EEEECCCCCCCceeEEeecCCCCceEEEeeeeCC-EEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEE
Confidence 88898875 23 1333 3344566667766544 555655544 3566667654322222 233333 3455555
Q ss_pred CCCCCCEEEEEeCCCc--EEEEECC------CCCCCCCCCCCccceEEeccC-CCeeEEEE----cCCCCCEEEEEeCC-
Q 010748 361 DPHAEHSFVVSLEDGT--IKGFDIR------TAKSDPDSTSQQSSFTLHAHD-KAVCTISY----NPLVPNLLATGSTD- 426 (502)
Q Consensus 361 ~~~~~~~~~~~~~dg~--v~i~d~~------~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~----sp~~~~~l~t~s~d- 426 (502)
. +..++++...+|. |.++++. .. ......+.... ..+..+.+ ++++..++++.+..
T Consensus 377 ~--~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~--------g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~ 446 (751)
T 2xe4_A 377 R--SNYLVVAGRRAGLTRIWTMMADSQDGVFKA--------GTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLA 446 (751)
T ss_dssp C--SSEEEEEEEETTEEEEEEEECCTTTSCCCT--------TTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETT
T ss_pred E--CCEEEEEEEeCCEEEEEEEecccccccccC--------CccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCC
Confidence 4 4557777777886 4555641 11 01022222111 22333332 34554566665543
Q ss_pred --CcEEEEECCCCCeeEE
Q 010748 427 --KMVKLWDLSNNQPSCI 442 (502)
Q Consensus 427 --g~i~vwd~~~~~~~~~ 442 (502)
..+..+|+.+++...+
T Consensus 447 ~P~~~~~~d~~~~~~~~l 464 (751)
T 2xe4_A 447 TPNTWFDVSPQDHSRTAV 464 (751)
T ss_dssp EEEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEECCCCcEEEE
Confidence 3577788877664333
No 264
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.40 E-value=6.7e-05 Score=71.02 Aligned_cols=242 Identities=8% Similarity=-0.007 Sum_probs=134.6
Q ss_pred ccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeec------------------cccCCCcceeeeecCC
Q 010748 141 DLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHH------------------IIIPAFPLCMAWLDCP 202 (502)
Q Consensus 141 ~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~------------------~~~~~~~~~~~~~~~~ 202 (502)
.-+.+++.|+++++.++...+ .|+.|+.... .+..... ......|.++.+
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~-----~i~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~---- 87 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDG-----RVIKYEGPNS---GFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISY---- 87 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTS-----EEEEECCTTT---CEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEE----
T ss_pred CceEEEEcCCCCEEEEEcCCC-----eEEEECCCCC---ceEEEecccccccccccccccchhccccCCCCceEEE----
Confidence 346788999999787776665 7888865543 2221110 011123555554
Q ss_pred CCCCC-CCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCccccccccc-CcccceeeEEecc-CCC
Q 010748 203 LKDRE-KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKG-SHTDSVLGLAWNK-EFR 279 (502)
Q Consensus 203 ~~~s~-~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~l~~~~-~~~ 279 (502)
.+ +++++++ ...+.|.+++..+... .. +. .... ........+++.+ ++
T Consensus 88 ---~~~~g~l~v~-d~~~~i~~~d~~~g~~-~~---~~--------------------~~~~~~~~~~p~~i~~d~~~G- 138 (322)
T 2fp8_A 88 ---NLQNNQLYIV-DCYYHLSVVGSEGGHA-TQ---LA--------------------TSVDGVPFKWLYAVTVDQRTG- 138 (322)
T ss_dssp ---ETTTTEEEEE-ETTTEEEEECTTCEEC-EE---EE--------------------SEETTEECSCEEEEEECTTTC-
T ss_pred ---cCCCCcEEEE-ECCCCEEEEeCCCCEE-EE---ec--------------------ccCCCCcccccceEEEecCCC-
Confidence 45 5554444 3334477777653211 00 00 0000 1113467899999 74
Q ss_pred cEEEEEec-----------------CCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCC
Q 010748 280 NILASASA-----------------DKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS 342 (502)
Q Consensus 280 ~~l~sgs~-----------------dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~ 342 (502)
++.++-.. .+.|..||..+++....... -.....|+|+|++..++++-+..+.|.+|++...
T Consensus 139 ~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~ 217 (322)
T 2fp8_A 139 IVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGP 217 (322)
T ss_dssp CEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSST
T ss_pred EEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCC
Confidence 45554322 36789999877764332221 2345679999998334455566789999998754
Q ss_pred CCc--cceEeecCCeeEEEeCCCCCCEEEEEeC----------CCcEEEEECCCCCCCCCCCCCccceEEeccC----CC
Q 010748 343 THS--GFKWAVAADVESLAWDPHAEHSFVVSLE----------DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHD----KA 406 (502)
Q Consensus 343 ~~~--~~~~~~~~~v~~v~~~~~~~~~~~~~~~----------dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~----~~ 406 (502)
... .......+ ...+++++++. ++++... .+.|..+|.. + ..+..+.... ..
T Consensus 218 ~~~~~~~~~~~~g-P~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~-G---------~~~~~~~~~~g~~~~~ 285 (322)
T 2fp8_A 218 KKGTAEVLVKIPN-PGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEF-G---------NILEVIPLPPPFAGEH 285 (322)
T ss_dssp TTTCEEEEEECSS-EEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTT-S---------CEEEEEECCTTTTTSC
T ss_pred cCCccceEEeCCC-CCCeEECCCCC-EEEEecCcccccccCCCccEEEEECCC-C---------CEEEEEECCCCCcccc
Confidence 221 11112233 77899999875 5555433 4668888764 2 3444444332 34
Q ss_pred eeEEEEcCCCCCEEEEEeCCCcEEEEECCCCC
Q 010748 407 VCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 438 (502)
Q Consensus 407 v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~ 438 (502)
++++++. .+ .++++....+.|.++++....
T Consensus 286 ~~~~~~~-~g-~L~v~~~~~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 286 FEQIQEH-DG-LLYIGTLFHGSVGILVYDKKG 315 (322)
T ss_dssp CCEEEEE-TT-EEEEECSSCSEEEEEEC----
T ss_pred ceEEEEe-CC-EEEEeecCCCceEEEeccccc
Confidence 6667663 33 666666667889999886544
No 265
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.36 E-value=0.00012 Score=75.30 Aligned_cols=59 Identities=12% Similarity=0.041 Sum_probs=37.3
Q ss_pred CCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010748 426 DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 426 dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~ 488 (502)
.|.|..||+.+++. +..... ..++.+-.+...+. ++..++.||.|+.||..+++.+-+.
T Consensus 452 ~G~l~A~D~~tG~~--~W~~~~-~~~~~~g~~~tagg-~vf~gt~dg~l~A~D~~tG~~lW~~ 510 (599)
T 1w6s_A 452 LGQIKAYNAITGDY--KWEKME-RFAVWGGTMATAGD-LVFYGTLDGYLKARDSDTGDLLWKF 510 (599)
T ss_dssp CEEEEEECTTTCCE--EEEEEE-SSCCCSBCEEETTT-EEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cCeEEEEECCCCCE--EeEecC-CCCccCcceEecCC-EEEEECCCCeEEEEECCCCCEEEEe
Confidence 46788899988873 333221 11111111122344 5666899999999999999988654
No 266
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.33 E-value=6.9e-05 Score=78.53 Aligned_cols=161 Identities=10% Similarity=0.130 Sum_probs=102.7
Q ss_pred cceeeEEeccCCCcEEEEEecCC-------------------cEEEEeCCCCeeeEeecc--CC-------CCeEEEEEc
Q 010748 267 DSVLGLAWNKEFRNILASASADK-------------------QVKIWDVAAGKCNLTLEH--HT-------DKVQAVAWN 318 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~dg-------------------~v~vwd~~~~~~~~~~~~--h~-------~~v~~l~~~ 318 (502)
.....+++.+. ..+++.++.++ .|..+|+.+|+.+..++. |. .+.....+.
T Consensus 230 ~~w~~~a~d~~-~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~ 308 (668)
T 1kv9_A 230 TVWDSMAYDPE-LDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELN 308 (668)
T ss_dssp CCCSCEEEETT-TTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEE
T ss_pred ccccceEEcCC-CCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEec
Confidence 34456788887 44777777665 399999999999888753 22 222222222
Q ss_pred CCCC--cEEEEEeCCCcEEEEecCCCCCccceE--------eec----CC------------------------eeEEEe
Q 010748 319 HHSP--QILLSGSFDRSVVMKDARISTHSGFKW--------AVA----AD------------------------VESLAW 360 (502)
Q Consensus 319 ~~~~--~~l~s~s~dg~i~iwd~~~~~~~~~~~--------~~~----~~------------------------v~~v~~ 360 (502)
.++. ..++.++.+|.++++|..+++.+.... ... .+ -..+++
T Consensus 309 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~ 388 (668)
T 1kv9_A 309 IDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSF 388 (668)
T ss_dssp ETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEE
T ss_pred cCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceE
Confidence 3441 268899999999999998887542110 000 00 012566
Q ss_pred CCCCCCEEEEEe------------------------------------CCCcEEEEECCCCCCCCCCCCCccceEEeccC
Q 010748 361 DPHAEHSFVVSL------------------------------------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHD 404 (502)
Q Consensus 361 ~~~~~~~~~~~~------------------------------------~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~ 404 (502)
+|... ++++.. .+|.|..||+.++ +.+++...+.
T Consensus 389 dp~~g-~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG---------~~~W~~~~~~ 458 (668)
T 1kv9_A 389 NPGTG-LVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQ---------KAAWKVPYPT 458 (668)
T ss_dssp ETTTT-EEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTT---------EEEEEEEESS
T ss_pred CCCCC-EEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCC---------cEEEEccCCC
Confidence 66544 444321 2377999999887 6667765443
Q ss_pred CCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCee
Q 010748 405 KAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS 440 (502)
Q Consensus 405 ~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~ 440 (502)
+.....+...+ .++++++.|+.|++||..+++..
T Consensus 459 -~~~~~~~~t~g-g~vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 459 -HWNGGTLSTAG-NLVFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp -SCCCCEEEETT-TEEEEECTTSEEEEEETTTCCEE
T ss_pred -CCcCceeEeCC-CEEEEECCcccchhhhhhcChhh
Confidence 23333334444 78889999999999999999843
No 267
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.31 E-value=4.7e-05 Score=81.08 Aligned_cols=234 Identities=10% Similarity=0.002 Sum_probs=125.3
Q ss_pred CC-CCCCEEEEecC-CC----cEEEeeCCCC-CCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccC
Q 010748 205 DR-EKGNFMAVGSM-EP----AIEIWDLDVI-DEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKE 277 (502)
Q Consensus 205 ~s-~~~~~la~g~~-dg----~I~iwdl~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~ 277 (502)
+| |+|++||.+.. .| .|+++|+.++ ..+.. . -......++|+|+
T Consensus 181 ~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~--------------------------~---~~~~~~~~~WspD 231 (751)
T 2xe4_A 181 PAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD--------------------------K---VSGTNGEIVWGPD 231 (751)
T ss_dssp ECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC--------------------------C---EEEECSCCEECSS
T ss_pred ecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc--------------------------c---ccCceeeEEEecC
Confidence 39 99999986543 22 4999999875 32110 0 0112457899999
Q ss_pred CCcEEEEEecC-----CcEEEEeCCCCee--eEeec-cCCCCeEEEEEcCCCCcEEEEEe-C--CCcEEEEecCCCC--C
Q 010748 278 FRNILASASAD-----KQVKIWDVAAGKC--NLTLE-HHTDKVQAVAWNHHSPQILLSGS-F--DRSVVMKDARIST--H 344 (502)
Q Consensus 278 ~~~~l~sgs~d-----g~v~vwd~~~~~~--~~~~~-~h~~~v~~l~~~~~~~~~l~s~s-~--dg~i~iwd~~~~~--~ 344 (502)
+..++++ +.+ ..|.++++.+++. ...+. ........+.|+|++ ++|+..+ . ...|.++|+.++. .
T Consensus 232 g~~l~y~-~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg-~~l~~~~~~~~~~~l~~~d~~~~~~~~ 309 (751)
T 2xe4_A 232 HTSLFYV-TKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADT-NTLCIGSQSPETAEVHLLDLRKGNAHN 309 (751)
T ss_dssp TTEEEEE-EECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTS-SEEEEEEECSSCEEEEEEESSSCTTCC
T ss_pred CCEEEEE-EECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCC-CEEEEEecCCCCceEEEEECCCCCCCc
Confidence 6544444 444 3688889887642 22222 223456788999999 5554443 2 3467888887652 2
Q ss_pred --ccceEeecCCeeEEEeCCCCCCEEEEEeCC----CcEEEEECCCCCCCCCCCCCccceE-EeccCC--CeeEEEEcCC
Q 010748 345 --SGFKWAVAADVESLAWDPHAEHSFVVSLED----GTIKGFDIRTAKSDPDSTSQQSSFT-LHAHDK--AVCTISYNPL 415 (502)
Q Consensus 345 --~~~~~~~~~~v~~v~~~~~~~~~~~~~~~d----g~v~i~d~~~~~~~~~~~~~~~~~~-~~~h~~--~v~~l~~sp~ 415 (502)
............++.|+. +..+++.+..+ ..|..+++.+. ..... +..+.. .+..+.+.
T Consensus 310 ~~~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~---------~~~~~~li~~~~~~~l~~~~~~-- 377 (751)
T 2xe4_A 310 TLEIVRPREKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQP---------SDWSHVLVDHSEDVFMESIAVR-- 377 (751)
T ss_dssp CEEESSCCCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTST---------TCCCCEEECCCSSEEEEEEEEC--
T ss_pred eeEEeecCCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCc---------ccceeeEECCCCCcEEEEEEEE--
Confidence 111112234445555544 45455555443 25666776532 11112 223333 34455554
Q ss_pred CCCEEEEEeCCCc--EEEEEC-------CCCC-eeEEEEecCCCCcEEEEEE----cCCCCcEEEEEeCC---CcEEEEE
Q 010748 416 VPNLLATGSTDKM--VKLWDL-------SNNQ-PSCIASRNPKAGAVFSVAF----SEDSPFVLAIGGSK---GKLEIWD 478 (502)
Q Consensus 416 ~~~~l~t~s~dg~--i~vwd~-------~~~~-~~~~~~~~~~~~~v~~~~~----spd~~~ll~sg~~d---g~i~vwd 478 (502)
+..++++...++. |.++++ ..++ .. ...+... +.+..+.+ ++++..++++.++- ..+..+|
T Consensus 378 ~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g~~~~-~l~l~~~-~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d 455 (751)
T 2xe4_A 378 SNYLVVAGRRAGLTRIWTMMADSQDGVFKAGTGLR-EVVMEEP-IFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVS 455 (751)
T ss_dssp SSEEEEEEEETTEEEEEEEECCTTTSCCCTTTCCE-ECCCCCS-SCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEEC
T ss_pred CCEEEEEEEeCCEEEEEEEecccccccccCCccce-EECCCCc-eeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEE
Confidence 4467777777876 455565 3333 21 1122221 22334433 44665555554443 3577778
Q ss_pred CCCCc
Q 010748 479 TLSDA 483 (502)
Q Consensus 479 ~~~~~ 483 (502)
+.+++
T Consensus 456 ~~~~~ 460 (751)
T 2xe4_A 456 PQDHS 460 (751)
T ss_dssp TTTCC
T ss_pred CCCCc
Confidence 77654
No 268
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.31 E-value=0.00033 Score=66.06 Aligned_cols=181 Identities=11% Similarity=0.009 Sum_probs=117.8
Q ss_pred CcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCC---CCccceEe-ecCCeeEEEeCCCC
Q 010748 289 KQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS---THSGFKWA-VAADVESLAWDPHA 364 (502)
Q Consensus 289 g~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~---~~~~~~~~-~~~~v~~v~~~~~~ 364 (502)
..|+..|+.+......+. ....+.+++|++.+..++++-...+.|..+++... ........ .-.....+++++.+
T Consensus 10 ~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~ 88 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 88 (316)
T ss_dssp SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred CeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecC
Confidence 569999998876655554 34567899999877466666667789999998762 11111121 12356788888766
Q ss_pred CCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCC-CcEEEEECCCCCeeEEE
Q 010748 365 EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD-KMVKLWDLSNNQPSCIA 443 (502)
Q Consensus 365 ~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~d-g~i~vwd~~~~~~~~~~ 443 (502)
.+++++-...+.|.++++... .....+...-.....+++.|.++.++++.... +.|..+++.......+
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~---------~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~- 158 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGV---------KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL- 158 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSS---------SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEE-
T ss_pred CeEEEEECCCCEEEEEeCCCC---------ceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEE-
Confidence 656666677889999998643 22222222335678999999763555554433 6888888865442222
Q ss_pred EecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010748 444 SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 444 ~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~ 481 (502)
..........++++|++..++.+-...+.|..+++..
T Consensus 159 -~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 159 -VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp -ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred -EECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 1223456889999998776666666678999999864
No 269
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.27 E-value=0.00039 Score=71.38 Aligned_cols=60 Identities=8% Similarity=0.104 Sum_probs=38.5
Q ss_pred CCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccc
Q 010748 426 DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 426 dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
+|.|..||+.+++. +...... .++..-.....+. +++.|+.||.|+.||..+++.+.+.-
T Consensus 465 ~G~l~A~D~~tG~~--~W~~~~~-~~~~~g~~~tagg-lvf~g~~dg~l~A~D~~tG~~lW~~~ 524 (582)
T 1flg_A 465 VGSLRAMDPVSGKV--VWEHKEH-LPLWAGVLATAGN-LVFTGTGDGYFKAFDAKSGKELWKFQ 524 (582)
T ss_dssp SEEEEEECTTTCCE--EEEEEES-SCCCSCCEEETTT-EEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cceEEEEECCCCCE--EEEecCC-CCCcccceEeCCC-EEEEECCCCcEEEEECCCCCEEEEec
Confidence 57899999999884 3222211 1111111112244 57779999999999999999886543
No 270
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.26 E-value=0.00084 Score=71.80 Aligned_cols=198 Identities=9% Similarity=0.041 Sum_probs=123.8
Q ss_pred ccceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEee---ccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCC
Q 010748 266 TDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTL---EHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS 342 (502)
Q Consensus 266 ~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~---~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~ 342 (502)
...|.++...+++ .|..|+.++-|.+|+..+++..... ......|.++...+++ . |..|+.++.|..++.++.
T Consensus 362 ~~~v~~i~~d~~g--~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g-~-lWigt~~~Gl~~~~~~~~ 437 (781)
T 3v9f_A 362 NKVVSSVCDDGQG--KLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEG-N-LWFGTYLGNISYYNTRLK 437 (781)
T ss_dssp SSCEEEEEECTTS--CEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTS-C-EEEEETTEEEEEECSSSC
T ss_pred CcceEEEEEcCCC--CEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCC-C-EEEEeccCCEEEEcCCCC
Confidence 3568999888773 3556776677999998765432211 1234678999888777 4 555777778899988765
Q ss_pred CCccceE--eecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEec-----cCCCeeEEEEcCC
Q 010748 343 THSGFKW--AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA-----HDKAVCTISYNPL 415 (502)
Q Consensus 343 ~~~~~~~--~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~l~~sp~ 415 (502)
+...... .....|.++...+++ .+.+|+. +.|..|+..+.. ....... ....|.++...++
T Consensus 438 ~~~~~~~~~~~~~~v~~i~~d~~g--~lwigt~-~Gl~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~i~~d~~ 505 (781)
T 3v9f_A 438 KFQIIELEKNELLDVRVFYEDKNK--KIWIGTH-AGVFVIDLASKK---------VIHHYDTSNSQLLENFVRSIAQDSE 505 (781)
T ss_dssp EEEECCSTTTCCCCEEEEEECTTS--EEEEEET-TEEEEEESSSSS---------CCEEECTTTSSCSCSCEEEEEECTT
T ss_pred cEEEeccCCCCCCeEEEEEECCCC--CEEEEEC-CceEEEeCCCCe---------EEecccCcccccccceeEEEEEcCC
Confidence 4322111 123568888888754 4677776 568899987652 1111111 1357889988887
Q ss_pred CCCEEEEEeCCCcEEEEECCCCCeeEEEEec-CCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010748 416 VPNLLATGSTDKMVKLWDLSNNQPSCIASRN-PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 416 ~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~-~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~ 483 (502)
+ . |..|+..+-|..|+..+.+........ .....|.++...++|. |-.|+..|.|..||..++.
T Consensus 506 g-~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~--lWi~T~~Glv~~~d~~~~~ 570 (781)
T 3v9f_A 506 G-R-FWIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQ--MWLATGEGLVCFPSARNFD 570 (781)
T ss_dssp C-C-EEEEESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSC--EEEEETTEEEEESCTTTCC
T ss_pred C-C-EEEEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCC--EEEEECCCceEEECCCCCc
Confidence 6 4 444555444888988766522211111 1235689999999997 3334556654888887654
No 271
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.26 E-value=0.00032 Score=65.78 Aligned_cols=228 Identities=8% Similarity=0.059 Sum_probs=124.6
Q ss_pred ccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCC-
Q 010748 141 DLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEP- 219 (502)
Q Consensus 141 ~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~dg- 219 (502)
..+.+++.|+++++++-...+ +|+.++.... +... ...+..|.++++ .++|+++++.....
T Consensus 33 ~pegia~~~~g~lyv~d~~~~-----~I~~~d~~g~----~~~~--~~~~~~p~gia~-------~~dG~l~vad~~~~~ 94 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVG-----EIVSITPDGN----QQIH--ATVEGKVSGLAF-------TSNGDLVATGWNADS 94 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTT-----EEEEECTTCC----EEEE--EECSSEEEEEEE-------CTTSCEEEEEECTTS
T ss_pred CcceEEECCCCCEEEEeCCCC-----eEEEECCCCc----eEEE--EeCCCCceeEEE-------cCCCcEEEEeccCCc
Confidence 356789999998776665454 7888875542 2111 123345566655 68888766654333
Q ss_pred -cEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeCCC
Q 010748 220 -AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAA 298 (502)
Q Consensus 220 -~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~ 298 (502)
.|..++..++.. ..... . ........++..+. +..+++-+..+.|.++|..+
T Consensus 95 ~~v~~~d~~~g~~-~~~~~------------------------~-~~~~~~~g~~~~~~-~~~~v~d~~~g~i~~~d~~~ 147 (306)
T 2p4o_A 95 IPVVSLVKSDGTV-ETLLT------------------------L-PDAIFLNGITPLSD-TQYLTADSYRGAIWLIDVVQ 147 (306)
T ss_dssp CEEEEEECTTSCE-EEEEE------------------------C-TTCSCEEEEEESSS-SEEEEEETTTTEEEEEETTT
T ss_pred ceEEEEcCCCCeE-EEEEe------------------------C-CCccccCcccccCC-CcEEEEECCCCeEEEEeCCC
Confidence 355556543321 10000 0 01111233443444 44555555688999999876
Q ss_pred Cee-eEee---------ccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCC-CCCc-cceEeecCCeeEEEeCCCCCC
Q 010748 299 GKC-NLTL---------EHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI-STHS-GFKWAVAADVESLAWDPHAEH 366 (502)
Q Consensus 299 ~~~-~~~~---------~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~-~~~~-~~~~~~~~~v~~v~~~~~~~~ 366 (502)
++. +... ...-.....| ++++..++++-+..+.|..|++.. +... ...+........+++++++.
T Consensus 148 ~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~- 224 (306)
T 2p4o_A 148 PSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGN- 224 (306)
T ss_dssp TEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCC-
T ss_pred CcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCC-
Confidence 532 1111 0111234555 677745666666788999999875 2211 11122224567788999874
Q ss_pred EEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEc---CCCCCEEEEEe
Q 010748 367 SFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYN---PLVPNLLATGS 424 (502)
Q Consensus 367 ~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s---p~~~~~l~t~s 424 (502)
++++....+.|.+|+.... ...+..+...-...++++|. |++..++++..
T Consensus 225 l~va~~~~~~V~~~~~~G~--------~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 225 LYGATHIYNSVVRIAPDRS--------TTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp EEEECBTTCCEEEECTTCC--------EEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred EEEEeCCCCeEEEECCCCC--------EEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 6666666788999986521 01111223333568899998 77634444443
No 272
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.24 E-value=3.9e-05 Score=69.11 Aligned_cols=168 Identities=8% Similarity=0.013 Sum_probs=115.5
Q ss_pred eeeEeeccCC--CCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeecCCeeE--EEeCCCCCCEEEEEeCCC
Q 010748 300 KCNLTLEHHT--DKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVES--LAWDPHAEHSFVVSLEDG 375 (502)
Q Consensus 300 ~~~~~~~~h~--~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~v~~--v~~~~~~~~~~~~~~~dg 375 (502)
+.+.++. |. ...+.|.|+. + .++++.+.+|.|+++|+.+++..... ....... +++. +..++++...++
T Consensus 44 ~Vv~~~p-hd~~~ftqGL~~~~-~-~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~~--g~~Ly~ltw~~~ 116 (268)
T 3nok_A 44 HIIREYP-HATNAFTQGLVFHQ-G-HFFESTGHQGTLRQLSLESAQPVWME--RLGNIFAEGLASD--GERLYQLTWTEG 116 (268)
T ss_dssp EEEEEEE-CCTTCCEEEEEEET-T-EEEEEETTTTEEEECCSSCSSCSEEE--ECTTCCEEEEEEC--SSCEEEEESSSC
T ss_pred EEEEEEc-CCCccccceEEEEC-C-EEEEEcCCCCEEEEEECCCCcEEeEE--CCCCcceeEEEEe--CCEEEEEEccCC
Confidence 4555663 44 3458899974 3 78888888999999999999887655 5444433 5554 455777777899
Q ss_pred cEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCC---CcE
Q 010748 376 TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKA---GAV 452 (502)
Q Consensus 376 ~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~---~~v 452 (502)
.+.+||..+. +.+.++.... .-..++ +++ ..|+.+..++.|.++|..+.+.........+. ..+
T Consensus 117 ~v~V~D~~Tl---------~~~~ti~~~~-eGwGLt--~Dg-~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~l 183 (268)
T 3nok_A 117 LLFTWSGMPP---------QRERTTRYSG-EGWGLC--YWN-GKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELI 183 (268)
T ss_dssp EEEEEETTTT---------EEEEEEECSS-CCCCEE--EET-TEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCE
T ss_pred EEEEEECCcC---------cEEEEEeCCC-ceeEEe--cCC-CEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccc
Confidence 9999999987 6666666432 224555 445 55555556889999999998754333332222 245
Q ss_pred EEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccc
Q 010748 453 FSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 453 ~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
+.+.|. +|. +++..-....|.+.|..+++.+..+-
T Consensus 184 NeLe~~-dG~-lyanvw~s~~I~vIDp~TG~V~~~Id 218 (268)
T 3nok_A 184 NELECA-NGV-IYANIWHSSDVLEIDPATGTVVGVID 218 (268)
T ss_dssp EEEEEE-TTE-EEEEETTCSEEEEECTTTCBEEEEEE
T ss_pred cccEEe-CCE-EEEEECCCCeEEEEeCCCCcEEEEEE
Confidence 677877 665 67666567899999999999876544
No 273
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.23 E-value=2e-05 Score=82.69 Aligned_cols=202 Identities=11% Similarity=0.175 Sum_probs=108.5
Q ss_pred eeeEEeccCCCcEEEEEe-cCCcEEEEeCCCCeeeEeeccCCC-CeEEEEEcCCCCcEEEEEe-CC-----CcEEEEecC
Q 010748 269 VLGLAWNKEFRNILASAS-ADKQVKIWDVAAGKCNLTLEHHTD-KVQAVAWNHHSPQILLSGS-FD-----RSVVMKDAR 340 (502)
Q Consensus 269 V~~l~~~~~~~~~l~sgs-~dg~v~vwd~~~~~~~~~~~~h~~-~v~~l~~~~~~~~~l~s~s-~d-----g~i~iwd~~ 340 (502)
..++++..+ +.+++.|+ .+..+.+||..+++-...-..+.. .-.++...+++ ++++.|+ .+ ..+.+||..
T Consensus 245 ~~~~~~~~~-g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg-~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 245 CPGISMDGN-GQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDG-RVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp SCEEEECTT-SCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTS-CEEEECCCCCSSSCCCCEEEEETT
T ss_pred cccccCCCC-CCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCC-eEEEEeCcccCCcccccceEeCCC
Confidence 445667777 45777877 456899999987754332221211 22345566677 7888888 44 568999987
Q ss_pred CCCCccce----EeecCCeeEEEeCCCCCCEEEEEeCCC---------cEEEEECCCCCCCCCCCCCccceEEecc----
Q 010748 341 ISTHSGFK----WAVAADVESLAWDPHAEHSFVVSLEDG---------TIKGFDIRTAKSDPDSTSQQSSFTLHAH---- 403 (502)
Q Consensus 341 ~~~~~~~~----~~~~~~v~~v~~~~~~~~~~~~~~~dg---------~v~i~d~~~~~~~~~~~~~~~~~~~~~h---- 403 (502)
+..-.... ......-....+..+ ..+++.|+.+| .+..||..+. ........+
T Consensus 323 t~~W~~~~~~~~~p~~~~~~~~~~~~~-~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~---------~w~~~~~~~~~~~ 392 (656)
T 1k3i_A 323 SKTWTSLPNAKVNPMLTADKQGLYRSD-NHAWLFGWKKGSVFQAGPSTAMNWYYTSGS---------GDVKSAGKRQSNR 392 (656)
T ss_dssp TTEEEEETTSCSGGGCCCCTTGGGTTT-CSCCEEECGGGCEEECCSSSEEEEEECSTT---------CEEEEEEECEETT
T ss_pred CCcceeCCCccccccccccccceeecC-CceEEEECCCCcEEEecCccceeeeecCCc---------ceeecCCcccccc
Confidence 64311100 000000000112222 23455555444 4677887764 111111111
Q ss_pred -----CCCeeEEEEcCCCCCEEEEEeCCC-----------cEEEEECCCCCeeEEEEecCCCCcE-EEEEEcCCCCcEEE
Q 010748 404 -----DKAVCTISYNPLVPNLLATGSTDK-----------MVKLWDLSNNQPSCIASRNPKAGAV-FSVAFSEDSPFVLA 466 (502)
Q Consensus 404 -----~~~v~~l~~sp~~~~~l~t~s~dg-----------~i~vwd~~~~~~~~~~~~~~~~~~v-~~~~~spd~~~ll~ 466 (502)
...-.++.|...+..+++.|+.++ .|.+||..+.....+..-....... .++...|++. +++
T Consensus 393 ~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~-i~v 471 (656)
T 1k3i_A 393 GVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGS-TFI 471 (656)
T ss_dssp EECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSC-EEE
T ss_pred ccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCC-EEE
Confidence 112344445443447888887542 5788888877643332001122222 3456778888 788
Q ss_pred EEeCC-----------CcEEEEECCCCc
Q 010748 467 IGGSK-----------GKLEIWDTLSDA 483 (502)
Q Consensus 467 sg~~d-----------g~i~vwd~~~~~ 483 (502)
.||.+ ..+.+||..+++
T Consensus 472 ~GG~~~~~~~~~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 472 TGGQRRGIPFEDSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp ECCBSBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred ECCcccCcCcCCCCcccceEEEcCCCCc
Confidence 88854 468999987654
No 274
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.22 E-value=2.3e-05 Score=70.59 Aligned_cols=172 Identities=8% Similarity=0.018 Sum_probs=111.5
Q ss_pred eeeEeeccCCC--CeEEEEEcCCCCcEEEEEeCCC--cEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEEEEEeCCC
Q 010748 300 KCNLTLEHHTD--KVQAVAWNHHSPQILLSGSFDR--SVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDG 375 (502)
Q Consensus 300 ~~~~~~~~h~~--~v~~l~~~~~~~~~l~s~s~dg--~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg 375 (502)
+.+.++. |.. ..+.|.|+ ++ .++.+.+.+| .|+++|+.+++.... .............+.+..++++.-.++
T Consensus 32 ~vv~~~p-hd~~~ftqGL~~~-~~-~LyestG~~g~S~v~~vD~~Tgkv~~~-~~l~~~~FgeGit~~g~~ly~ltw~~~ 107 (262)
T 3nol_A 32 QIVHSYP-HDTKAFTEGFFYR-NG-YFYESTGLNGRSSIRKVDIESGKTLQQ-IELGKRYFGEGISDWKDKIVGLTWKNG 107 (262)
T ss_dssp EEEEEEE-CCTTCEEEEEEEE-TT-EEEEEEEETTEEEEEEECTTTCCEEEE-EECCTTCCEEEEEEETTEEEEEESSSS
T ss_pred EEEEEec-CCCCcccceEEEE-CC-EEEEECCCCCCceEEEEECCCCcEEEE-EecCCccceeEEEEeCCEEEEEEeeCC
Confidence 3556664 443 35889998 55 7777777766 899999999886653 334444433222233455666666789
Q ss_pred cEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCC---CcE
Q 010748 376 TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKA---GAV 452 (502)
Q Consensus 376 ~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~---~~v 452 (502)
.+.+||..+. +.+.++.... .-..++ +++..++++ ...+.|.++|..+.+........... ..+
T Consensus 108 ~v~v~D~~t~---------~~~~ti~~~~-eG~glt--~dg~~L~~S-dGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~l 174 (262)
T 3nol_A 108 LGFVWNIRNL---------RQVRSFNYDG-EGWGLT--HNDQYLIMS-DGTPVLRFLDPESLTPVRTITVTAHGEELPEL 174 (262)
T ss_dssp EEEEEETTTC---------CEEEEEECSS-CCCCEE--ECSSCEEEC-CSSSEEEEECTTTCSEEEEEECEETTEECCCE
T ss_pred EEEEEECccC---------cEEEEEECCC-CceEEe--cCCCEEEEE-CCCCeEEEEcCCCCeEEEEEEeccCCcccccc
Confidence 9999999987 5666666432 223444 455344444 44778999999988753333332211 335
Q ss_pred EEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccccc
Q 010748 453 FSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFS 490 (502)
Q Consensus 453 ~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~~ 490 (502)
+.+.|. +|. +++..-.+..|.+.|..+++.+..+-.
T Consensus 175 NELe~~-~G~-lyan~w~~~~I~vIDp~tG~V~~~Id~ 210 (262)
T 3nol_A 175 NELEWV-DGE-IFANVWQTNKIVRIDPETGKVTGIIDL 210 (262)
T ss_dssp EEEEEE-TTE-EEEEETTSSEEEEECTTTCBEEEEEEC
T ss_pred ceeEEE-CCE-EEEEEccCCeEEEEECCCCcEEEEEEC
Confidence 567776 665 676666688999999999998766543
No 275
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.22 E-value=0.0043 Score=66.32 Aligned_cols=203 Identities=11% Similarity=0.060 Sum_probs=123.9
Q ss_pred cceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeec-------cCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEec
Q 010748 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLE-------HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDA 339 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~-------~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~ 339 (502)
..|.++...++ + .|..|+..+-|..||..+++...... .....|.++...+++ . |..|+.. -|.+||.
T Consensus 163 ~~i~~i~~d~~-g-~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g-~-lwigt~~-Gl~~~d~ 237 (781)
T 3v9f_A 163 EQTWTATEAED-G-KLYIGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNG-N-IWIGTSK-GLALFNA 237 (781)
T ss_dssp CCEEEEEEEET-T-EEEEEETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTC-C-EEEEETT-EEEEEET
T ss_pred cceEEEEECCC-C-CEEEEecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCC-C-EEEEeCC-cHheECC
Confidence 45888887766 3 45556766569999988775433211 113568899888877 4 4445555 6888998
Q ss_pred CCCCCccceE-------eecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceE-------EeccCC
Q 010748 340 RISTHSGFKW-------AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFT-------LHAHDK 405 (502)
Q Consensus 340 ~~~~~~~~~~-------~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~-------~~~h~~ 405 (502)
.+........ .....|.++...+++ .+.+|+..+-|.+++..+....... ...... ......
T Consensus 238 ~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g--~lWigt~~~Gl~~~~~~~~~~~~~~--~~~f~~~~~~~~~~~l~~~ 313 (781)
T 3v9f_A 238 NTETFTNFHNNPGNIHGALSSYIFSIKQLKDN--KLWIATELNGIMILDLQQNQFLLPE--QIRFEFIREGDNNYSLSNA 313 (781)
T ss_dssp TTTEEEC-----------CCCCEEEEEECTTS--EEEEEESSSCEEEEETTCC-----------CEEECBCSSTTSBSSS
T ss_pred CCCcEEEEEcCCCccccccCceEEEEEECCCC--CEEEEeCCCCeEEECCCCCeeeeee--ccccccccCCCCCCCCCCC
Confidence 7654332111 123568888888754 5778887667889998765210000 000000 012345
Q ss_pred CeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEE-------ecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEE
Q 010748 406 AVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS-------RNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 478 (502)
Q Consensus 406 ~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~-------~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd 478 (502)
.|.++...+++ .|-.|+.++-|..|+........... .......|.++...+++. |-.|+.++.|..|+
T Consensus 314 ~v~~i~~D~~g--~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~--lWigt~~~Gl~~~~ 389 (781)
T 3v9f_A 314 SARYIFQDSFN--NIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK--LWIGTDGGGINVFE 389 (781)
T ss_dssp CEEEEEECSSC--CEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC--EEEEEBSSCEEEEE
T ss_pred eEEEEEEeCCC--CEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC--EEEEeCCCcEEEEE
Confidence 68899888876 35567767779999987665322211 111235699999999887 44567666799998
Q ss_pred CCCC
Q 010748 479 TLSD 482 (502)
Q Consensus 479 ~~~~ 482 (502)
..++
T Consensus 390 ~~~~ 393 (781)
T 3v9f_A 390 NGKR 393 (781)
T ss_dssp TTEE
T ss_pred CCCC
Confidence 7654
No 276
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.21 E-value=0.0018 Score=66.95 Aligned_cols=206 Identities=11% Similarity=0.062 Sum_probs=136.5
Q ss_pred cceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCcc
Q 010748 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG 346 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~ 346 (502)
..+..|+|.+..+.++.+-...+.|..+++........+.........|++.+.+.+++++-...+.|.+.++.......
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~ 116 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQV 116 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEE
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEE
Confidence 45789999998666666767788999999875543333332234577888887765666776778899999987654332
Q ss_pred ceEeecCCeeEEEeCCCCCCEEEEE-eCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeC
Q 010748 347 FKWAVAADVESLAWDPHAEHSFVVS-LEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST 425 (502)
Q Consensus 347 ~~~~~~~~v~~v~~~~~~~~~~~~~-~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~ 425 (502)
.....-.....++++|....++++- +..+.|...++... ....+...-.....|++++.+..+.++-..
T Consensus 117 l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~----------~~~~l~~~~~~P~GlalD~~~~~LY~aD~~ 186 (628)
T 4a0p_A 117 LVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGS----------ERTTLVPNVGRANGLTIDYAKRRLYWTDLD 186 (628)
T ss_dssp EECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC----------SCEEEECSCSSEEEEEEETTTTEEEEEETT
T ss_pred EEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCC----------ceEEEECCCCCcceEEEccccCEEEEEECC
Confidence 2223334578999998655444443 23567888877643 222333345567899999976466666666
Q ss_pred CCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccc
Q 010748 426 DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 487 (502)
Q Consensus 426 dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~ 487 (502)
.+.|..+++.......+. ........+++..+ +++.+-...+.|...|..++.....
T Consensus 187 ~~~I~~~d~dG~~~~v~~---~~l~~P~glav~~~--~ly~tD~~~~~I~~~dk~tg~~~~~ 243 (628)
T 4a0p_A 187 TNLIESSNMLGLNREVIA---DDLPHPFGLTQYQD--YIYWTDWSRRSIERANKTSGQNRTI 243 (628)
T ss_dssp TTEEEEEETTSCSCEEEE---ECCSCEEEEEEETT--EEEEEETTTTEEEEEETTTCCSCEE
T ss_pred CCEEEEEcCCCCceEEee---ccCCCceEEEEECC--EEEEecCCCCEEEEEECCCCCceEE
Confidence 788999999776542222 22344668888663 3677766688999999877765443
No 277
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.19 E-value=0.00025 Score=69.98 Aligned_cols=205 Identities=7% Similarity=0.099 Sum_probs=114.1
Q ss_pred ccceeeEEeccCCCcEEEEEecCC----cEEEEeCCCCeee--EeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEec
Q 010748 266 TDSVLGLAWNKEFRNILASASADK----QVKIWDVAAGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDA 339 (502)
Q Consensus 266 ~~~V~~l~~~~~~~~~l~sgs~dg----~v~vwd~~~~~~~--~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~ 339 (502)
......|+|++++..++++....+ .+.+.+ ..+... ..+.. ......++++|.+..++++-...+.|..++.
T Consensus 178 ~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~-~~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~ 255 (430)
T 3tc9_A 178 LSKVRTICWTHEADSMIITNDQNNNDRPNNYILT-RESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDF 255 (430)
T ss_dssp CSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE-GGGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEET
T ss_pred CCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe-CCCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEEC
Confidence 355789999999543444443222 233344 333221 22221 2345678899944377777777889999998
Q ss_pred CCCCCccceEee--cCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEecc--------------
Q 010748 340 RISTHSGFKWAV--AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH-------------- 403 (502)
Q Consensus 340 ~~~~~~~~~~~~--~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h-------------- 403 (502)
....... .... ......++|+|++..++++-...+.|..++....... ......+.+.
T Consensus 256 ~~~~~~~-~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~-----~~~~~~~ag~~g~~g~~dg~~~~a 329 (430)
T 3tc9_A 256 TTQETTP-LFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKR-----LTTPYIVCGQQGAKDWVDGVGKKA 329 (430)
T ss_dssp TTTEEEE-EEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTE-----ECCCEEEEECTTCBCCBCEEGGGC
T ss_pred CCCcEEE-EEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCccccc-----ccceEEEeccCCCCCCCCCCCcce
Confidence 7654321 1222 2357789999988756666677888999876532000 0001111111
Q ss_pred -CCCee-EEEEc--------CCCCCEEEEEeCCCcEEEEECCCCCeeEEEEe-----cC----------CCCcEEEEEEc
Q 010748 404 -DKAVC-TISYN--------PLVPNLLATGSTDKMVKLWDLSNNQPSCIASR-----NP----------KAGAVFSVAFS 458 (502)
Q Consensus 404 -~~~v~-~l~~s--------p~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~-----~~----------~~~~v~~~~~s 458 (502)
-.... .++.. +.+ .++++-...+.|+.++. .+....+... .+ .......++++
T Consensus 330 ~~~~P~~gv~v~~~~y~~~D~~g-~lyvaD~~n~~I~~i~~-~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd 407 (430)
T 3tc9_A 330 RMHAPRQGTFVKNPAYKGSSDEY-DFYFCDRENHCIRILTP-QGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYD 407 (430)
T ss_dssp BBSSEEEEEEEECGGGTTSSCCE-EEEEEEGGGTEEEEECT-TSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEE
T ss_pred EeCCCcceEEEccccccccCCCC-eEEEEECCCcEEEEECC-CCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEE
Confidence 01122 44443 223 55555556678888884 4443222221 00 01257899999
Q ss_pred CCCCcEEEEEeCCCcEEEEECC
Q 010748 459 EDSPFVLAIGGSKGKLEIWDTL 480 (502)
Q Consensus 459 pd~~~ll~sg~~dg~i~vwd~~ 480 (502)
|++..|+++-..+..|+.+++.
T Consensus 408 ~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 408 EERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp TTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCCEEEEEECCCCeEEEEccC
Confidence 9544467766667788887753
No 278
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.18 E-value=0.00036 Score=62.21 Aligned_cols=184 Identities=12% Similarity=0.090 Sum_probs=111.8
Q ss_pred CCCcceeeeecCCCCCCCCCCEEEEecCC--CcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCccc
Q 010748 190 PAFPLCMAWLDCPLKDREKGNFMAVGSME--PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTD 267 (502)
Q Consensus 190 ~~~~~~~~~~~~~~~~s~~~~~la~g~~d--g~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 267 (502)
.+|...+.+ ++ +.+..+.+.. ..|+++|+.+++.+....+ ..+.
T Consensus 20 ~~ftqGL~~-------~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l-------------------------~~~~- 65 (243)
T 3mbr_X 20 TAFTEGLFY-------LR-GHLYESTGETGRSSVRKVDLETGRILQRAEV-------------------------PPPY- 65 (243)
T ss_dssp TCCEEEEEE-------ET-TEEEEEECCTTSCEEEEEETTTCCEEEEEEC-------------------------CTTC-
T ss_pred ccccccEEE-------EC-CEEEEECCCCCCceEEEEECCCCCEEEEEeC-------------------------CCCc-
Confidence 344455655 23 5555666654 4899999987654432211 0110
Q ss_pred ceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccc
Q 010748 268 SVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF 347 (502)
Q Consensus 268 ~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~ 347 (502)
---.+++. +..+....-.++.+.+||..+.+.+.++.... .-..++ +++ ..|+.+..++.|.++|..+.+....
T Consensus 66 fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~-~Gwglt--~dg-~~L~vSdgs~~l~~iDp~t~~~~~~ 139 (243)
T 3mbr_X 66 FGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTPRARFRYPG-EGWALT--SDD-SHLYMSDGTAVIRKLDPDTLQQVGS 139 (243)
T ss_dssp CEEEEEEE--TTEEEEEESSSSEEEEEETTTTEEEEEEECSS-CCCEEE--ECS-SCEEEECSSSEEEEECTTTCCEEEE
T ss_pred ceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCC-CceEEe--eCC-CEEEEECCCCeEEEEeCCCCeEEEE
Confidence 01223333 34455566678999999999999999987433 234555 455 4455556689999999998775543
Q ss_pred eEeec-----CCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEec-------------cCCCeeE
Q 010748 348 KWAVA-----ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA-------------HDKAVCT 409 (502)
Q Consensus 348 ~~~~~-----~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~-------------h~~~v~~ 409 (502)
..... ..++.+.|.. ..+++....+..|.+.|.+++ +.+..+.. ...-.+.
T Consensus 140 I~V~~~g~~~~~lNeLe~~~--G~lyanvw~s~~I~vIDp~tG---------~V~~~idl~~l~~~~~~~~~~~~~vlNG 208 (243)
T 3mbr_X 140 IKVTAGGRPLDNLNELEWVN--GELLANVWLTSRIARIDPASG---------KVVAWIDLQALVPDADALTDSTNDVLNG 208 (243)
T ss_dssp EECEETTEECCCEEEEEEET--TEEEEEETTTTEEEEECTTTC---------BEEEEEECGGGSTTTTSCCCTTSSCEEE
T ss_pred EEEccCCcccccceeeEEeC--CEEEEEECCCCeEEEEECCCC---------CEEEEEECCcCccccccccCCcCCceEE
Confidence 22111 2455666662 335555556788999999987 33333321 1235689
Q ss_pred EEEcCCCCCEEEEEe
Q 010748 410 ISYNPLVPNLLATGS 424 (502)
Q Consensus 410 l~~sp~~~~~l~t~s 424 (502)
|+++|.+.++++||-
T Consensus 209 IA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 209 IAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEETTTTEEEEEET
T ss_pred EEEcCCCCEEEEECC
Confidence 999998756666653
No 279
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.12 E-value=0.0059 Score=59.47 Aligned_cols=210 Identities=10% Similarity=-0.029 Sum_probs=125.5
Q ss_pred CCcceeeeecCCCCCCCC-CCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccce
Q 010748 191 AFPLCMAWLDCPLKDREK-GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSV 269 (502)
Q Consensus 191 ~~~~~~~~~~~~~~~s~~-~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V 269 (502)
..|..++| ++. +.++.+-...+.|+.++++...... .............
T Consensus 112 ~~~~~l~~-------d~~~~~lywsD~~~~~I~~~~~~g~~~~~-----------------------~~~~~~~~~~~~p 161 (400)
T 3p5b_L 112 RNVVALDT-------EVASNRIYWSDLSQRMICSTQLDRAHGVS-----------------------SYDTVISRDIQAP 161 (400)
T ss_dssp SCEEEEEE-------ETTTTEEEEEETTTTEEEEEEC------C-----------------------CCEEEECSSCSCE
T ss_pred CcceEEee-------eeccCceEEEecCCCeEEEEEcccCCCCC-----------------------cceEEEeCCCCCc
Confidence 34566776 443 5555555567888888886421100 0000111123457
Q ss_pred eeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeC-CCcEEEEecCCCCCccce
Q 010748 270 LGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSF-DRSVVMKDARISTHSGFK 348 (502)
Q Consensus 270 ~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~-dg~i~iwd~~~~~~~~~~ 348 (502)
..|++.+.+++++++-...+.|.+.++........+...-.....|++.|.+..++++-.. .+.|...++.........
T Consensus 162 ~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~ 241 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 241 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEE
T ss_pred ccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEE
Confidence 7888887656677777778899999987654444444344568899999977344444423 478888888754433222
Q ss_pred EeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCc
Q 010748 349 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKM 428 (502)
Q Consensus 349 ~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~ 428 (502)
...-.....|++++.+..++++-...+.|..+|+.... ...+......-....++++.. ..++++-...+.
T Consensus 242 ~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~-------~~~~~~~~~~l~~P~gl~v~~--~~lywtd~~~~~ 312 (400)
T 3p5b_L 242 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-------RKTILEDEKRLAHPFSLAVFE--DKVFWTDIINEA 312 (400)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC-------CEEEEECSSTTSSEEEEEEET--TEEEEEESSSCS
T ss_pred ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCc-------cEEEEeCCCCCCCCEEEEEeC--CEEEEecCCCCe
Confidence 12235678899998777566665677889999986531 011111111223455677643 367777777788
Q ss_pred EEEEECCCCCe
Q 010748 429 VKLWDLSNNQP 439 (502)
Q Consensus 429 i~vwd~~~~~~ 439 (502)
|..++..+++.
T Consensus 313 V~~~~~~~G~~ 323 (400)
T 3p5b_L 313 IFSANRLTGSD 323 (400)
T ss_dssp EEEEESSSCCC
T ss_pred EEEEEcCCCCc
Confidence 99999766653
No 280
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.12 E-value=0.0012 Score=67.64 Aligned_cols=138 Identities=15% Similarity=0.123 Sum_probs=85.7
Q ss_pred cEEEEeCCCCeeeEeecc--C--------CCCeEEEEEcCCCC--cEEEEEeCCCcEEEEecCCCCCccceEeec-----
Q 010748 290 QVKIWDVAAGKCNLTLEH--H--------TDKVQAVAWNHHSP--QILLSGSFDRSVVMKDARISTHSGFKWAVA----- 352 (502)
Q Consensus 290 ~v~vwd~~~~~~~~~~~~--h--------~~~v~~l~~~~~~~--~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~----- 352 (502)
.|..+|..+|+.+..++. | ..++. +....++. .+++.++.+|.+.++|..+++.........
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~ 351 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF 351 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccc
Confidence 599999999998887753 2 12222 22223442 357788899999999998876532111000
Q ss_pred --------CCe--------------------------eEEEeCCCCCCEEEEEe--------------------------
Q 010748 353 --------ADV--------------------------ESLAWDPHAEHSFVVSL-------------------------- 372 (502)
Q Consensus 353 --------~~v--------------------------~~v~~~~~~~~~~~~~~-------------------------- 372 (502)
.++ ..++++|... ++++..
T Consensus 352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g-~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~ 430 (571)
T 2ad6_A 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESR-TLYAGLNHICMDWEPFMLPYRAGQFFVGATLA 430 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTT-EEEEEEECEEEEEEECCCCCCTTSCCCCEEEE
T ss_pred ccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCC-EEEEEchhccccccccccccccCCccccccce
Confidence 001 2356777655 455443
Q ss_pred -----------CCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCee
Q 010748 373 -----------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS 440 (502)
Q Consensus 373 -----------~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~ 440 (502)
..|.|..||+.++ +.+++..... .+.+..+...+ .+++.++.|+.|+.||..+++..
T Consensus 431 ~~~~~~~~~~~~~g~l~a~D~~tG---------~~~W~~~~~~-~~~~~~~~t~g-g~v~~g~~dg~l~a~D~~tG~~l 498 (571)
T 2ad6_A 431 MYPGPNGPTKKEMGQIRAFDLTTG---------KAKWTKWEKF-AAWGGTLYTKG-GLVWYATLDGYLKALDNKDGKEL 498 (571)
T ss_dssp EEECTTSTTSCCCEEEEEECTTTC---------CEEEEEEESS-CCCSBCEEETT-TEEEEECTTSEEEEEETTTCCEE
T ss_pred eccCccccCCCCCCeEEEEECCCC---------CEEEEecCCC-CccceeEEECC-CEEEEEcCCCeEEEEECCCCCEE
Confidence 3478999999886 5666665332 22222222234 67778999999999999999843
No 281
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.08 E-value=0.0027 Score=59.70 Aligned_cols=203 Identities=11% Similarity=-0.013 Sum_probs=125.0
Q ss_pred cceeeeecCCCCCCC-CCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceee
Q 010748 193 PLCMAWLDCPLKDRE-KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLG 271 (502)
Q Consensus 193 ~~~~~~~~~~~~~s~-~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 271 (502)
+..+.| .+ ++.++.+-...+.|..++++....... .....-.....
T Consensus 37 ~~~ld~-------d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~--------------------------~~~~~l~~p~g 83 (318)
T 3sov_A 37 AAAVDF-------VFSHGLIYWSDVSEEAIKRTEFNKTESVQN--------------------------VVVSGLLSPDG 83 (318)
T ss_dssp EEEEEE-------EGGGTEEEEEETTTTEEEEEETTSSSCCCE--------------------------EEEECCSCCCE
T ss_pred cEEEEE-------EeCCCEEEEEECCCCcEEEEEccCCCceEE--------------------------EEcCCCCCccE
Confidence 456677 34 355666666678899998875321110 00011234667
Q ss_pred EEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEe-CCCcEEEEecCCCCCccceEe
Q 010748 272 LAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGS-FDRSVVMKDARISTHSGFKWA 350 (502)
Q Consensus 272 l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~ 350 (502)
|++.+.+++++++-...+.|.++++........+.........+++.|.+..++.+-. ..+.|..+++...........
T Consensus 84 lavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~ 163 (318)
T 3sov_A 84 LACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS 163 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECS
T ss_pred EEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEEC
Confidence 8888765767777777789999998754333333334456789999987634444432 357788888765432221111
Q ss_pred ecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEE
Q 010748 351 VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVK 430 (502)
Q Consensus 351 ~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~ 430 (502)
.-.....++|++.+..++++-+..+.|..+++... ..............++++.. ..++.+-...+.|.
T Consensus 164 ~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~---------~~~~~~~~~~~~P~glav~~--~~lywtd~~~~~V~ 232 (318)
T 3sov_A 164 EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT---------NRQAVVKGSLPHPFALTLFE--DILYWTDWSTHSIL 232 (318)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---------SCEEEECSCCSCEEEEEEET--TEEEEEETTTTEEE
T ss_pred CCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC---------ceEEEecCCCCCceEEEEeC--CEEEEEecCCCeEE
Confidence 22456889999977766666677889999998743 11111222334556777753 36677766778899
Q ss_pred EEECCCCCe
Q 010748 431 LWDLSNNQP 439 (502)
Q Consensus 431 vwd~~~~~~ 439 (502)
.++..+++.
T Consensus 233 ~~~~~~G~~ 241 (318)
T 3sov_A 233 ACNKYTGEG 241 (318)
T ss_dssp EEETTTCCS
T ss_pred EEECCCCCc
Confidence 999876653
No 282
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.07 E-value=0.00095 Score=65.86 Aligned_cols=205 Identities=8% Similarity=0.093 Sum_probs=114.5
Q ss_pred ccceeeEEeccCCCcEEEEEecC---Cc-EEEEeCCCCee-eEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecC
Q 010748 266 TDSVLGLAWNKEFRNILASASAD---KQ-VKIWDVAAGKC-NLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDAR 340 (502)
Q Consensus 266 ~~~V~~l~~~~~~~~~l~sgs~d---g~-v~vwd~~~~~~-~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~ 340 (502)
.....+|+|++++. ++++.... .. +...+...+.. ...+. .-.....++++|.+..++++-..++.|+.++..
T Consensus 181 ~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~ 258 (433)
T 4hw6_A 181 IGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPA 258 (433)
T ss_dssp CSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTT
T ss_pred CCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECC
Confidence 34588999999955 55554321 11 33333222111 01121 223456788999443666666678889999987
Q ss_pred CCCCccceEee--cCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEecc---------------
Q 010748 341 ISTHSGFKWAV--AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH--------------- 403 (502)
Q Consensus 341 ~~~~~~~~~~~--~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h--------------- 403 (502)
++......... ......++|+|++..++++-...+.|+.++....... ......+.+.
T Consensus 259 ~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~-----~~~~~~~ag~~g~~g~~dg~~~~a~ 333 (433)
T 4hw6_A 259 TGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGK-----LAVPYIVCGQHSSPGWVDGMGTGAR 333 (433)
T ss_dssp TCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCC-----BCCCEEEEECTTCCCCBCEEGGGSB
T ss_pred CCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcc-----cCcEEEEEecCCCCccCCCcccceE
Confidence 65542222221 1223469999988656666667789999886532100 0011111111
Q ss_pred CCCeeEEEE---------cCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecC---------------CCCcEEEEEEc-
Q 010748 404 DKAVCTISY---------NPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNP---------------KAGAVFSVAFS- 458 (502)
Q Consensus 404 ~~~v~~l~~---------sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~---------------~~~~v~~~~~s- 458 (502)
-.....+++ .+.+ .++++-...+.|+.++. ++....+.-... .......|+++
T Consensus 334 ~~~P~giav~~n~~y~~dd~~g-~lyvaD~~n~~I~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~ 411 (433)
T 4hw6_A 334 LWGPNQGIFVKNEAYAGEEDEY-DFYFCDRDSHTVRVLTP-EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDM 411 (433)
T ss_dssp CSSEEEEEEEECGGGTTSSCCE-EEEEEETTTTEEEEECT-TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEET
T ss_pred EcCCccEEEEccccccccCCCC-cEEEEECCCCEEEEECC-CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEEC
Confidence 123566888 5655 66666667788999985 443222221100 01246789999
Q ss_pred CCCCcEEEEEeCCCcEEEEECC
Q 010748 459 EDSPFVLAIGGSKGKLEIWDTL 480 (502)
Q Consensus 459 pd~~~ll~sg~~dg~i~vwd~~ 480 (502)
+++. ++++=..+++|+.+++.
T Consensus 412 ~~g~-lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 412 KRKC-FYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TTTE-EEEEEGGGTEEEEEEEC
T ss_pred CCCE-EEEEeCCCCEEEEEecC
Confidence 5555 56666667788887763
No 283
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.05 E-value=0.0009 Score=62.88 Aligned_cols=195 Identities=11% Similarity=0.169 Sum_probs=122.2
Q ss_pred CcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCC---Cc---EEEEEeC---CCcEEEEecC--CCCCccc
Q 010748 279 RNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHS---PQ---ILLSGSF---DRSVVMKDAR--ISTHSGF 347 (502)
Q Consensus 279 ~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~---~~---~l~s~s~---dg~i~iwd~~--~~~~~~~ 347 (502)
..+++.....+-+.+||+ +|+.++.+.. +.+..+...|.- .. ++++... +++|++|++. +......
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i 116 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSM 116 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEEC
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeec
Confidence 346666677788999999 8888888863 567777776621 01 3344443 5789999773 3221111
Q ss_pred e-----Eeec-CCeeEEEe--CCCCC-CEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCC
Q 010748 348 K-----WAVA-ADVESLAW--DPHAE-HSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPN 418 (502)
Q Consensus 348 ~-----~~~~-~~v~~v~~--~~~~~-~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~ 418 (502)
. .... ..+..+|+ +|... .++++...+|.+..|++....... ...+.+.++.. .+.+-.+...+.. .
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~--~~~~lVR~f~l-gsq~EgcvvDd~~-g 192 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGY--ISGKKVRAFKM-NSQTEGMAADDEY-G 192 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSC--EEEEEEEEEEC-SSCEEEEEEETTT-T
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCc--ccceEEEEecC-CCCcceEEEcCCC-C
Confidence 0 0111 45566777 77543 468888889999999985321100 00245566554 3567888888876 7
Q ss_pred EEEEEeCCCcEEEEECCCC---CeeEEEEec-CC-CCcEEEEEE--cCCCC-cEEEEEeCCCcEEEEECC
Q 010748 419 LLATGSTDKMVKLWDLSNN---QPSCIASRN-PK-AGAVFSVAF--SEDSP-FVLAIGGSKGKLEIWDTL 480 (502)
Q Consensus 419 ~l~t~s~dg~i~vwd~~~~---~~~~~~~~~-~~-~~~v~~~~~--spd~~-~ll~sg~~dg~i~vwd~~ 480 (502)
.|+.+-.+..|..++.... ....+.... ++ ...+..|++ .++++ |+|+++-.+.++.|||..
T Consensus 193 ~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 193 RLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred eEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 8999999877777775422 122333332 22 236888888 45555 777777677899999997
No 284
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.03 E-value=0.0033 Score=64.49 Aligned_cols=163 Identities=14% Similarity=0.160 Sum_probs=95.8
Q ss_pred CcEEEEeCCCCeeeEeecc--CC--------CCeEEEEEc-CCCC--cEEEEEeCCCcEEEEecCCCCCccceEeec---
Q 010748 289 KQVKIWDVAAGKCNLTLEH--HT--------DKVQAVAWN-HHSP--QILLSGSFDRSVVMKDARISTHSGFKWAVA--- 352 (502)
Q Consensus 289 g~v~vwd~~~~~~~~~~~~--h~--------~~v~~l~~~-~~~~--~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~--- 352 (502)
+.|..+|+.+|+.+..++. |. .++. +... .++. .+++.++.+|.++++|.++++.+.......
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 5899999999999888753 32 1222 2221 3442 378889999999999998876532111000
Q ss_pred ---------C---------------------------------CeeEEEeCCCCCCEEEEEe------------------
Q 010748 353 ---------A---------------------------------DVESLAWDPHAEHSFVVSL------------------ 372 (502)
Q Consensus 353 ---------~---------------------------------~v~~v~~~~~~~~~~~~~~------------------ 372 (502)
+ .-..++++|... ++++..
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g-~~yv~~~~~~~~~~~~~~~~~~g~ 448 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTG-LFYVPANHWKEDYWTEEVSYTKGS 448 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTC-CEEEEEECEEEEEEECCCCCCTTS
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCC-EEEEechhcceeeecccccccCCC
Confidence 0 001345666544 343322
Q ss_pred ---------------CCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCC
Q 010748 373 ---------------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNN 437 (502)
Q Consensus 373 ---------------~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~ 437 (502)
..|.|..||+.++ +.+++...+. ++..-.....+ .+++.++.|+.++.||.+++
T Consensus 449 ~~~g~~~~~~p~~~~~~G~l~A~D~~tG---------~~~W~~~~~~-~~~~g~~~tag-glvf~g~~dg~l~A~D~~tG 517 (582)
T 1flg_A 449 AYLGMGFRIKRMYDDHVGSLRAMDPVSG---------KVVWEHKEHL-PLWAGVLATAG-NLVFTGTGDGYFKAFDAKSG 517 (582)
T ss_dssp CCCCEEEEEEESCSSCSEEEEEECTTTC---------CEEEEEEESS-CCCSCCEEETT-TEEEEECTTSEEEEEETTTC
T ss_pred ceeccceeecCCCCCCcceEEEEECCCC---------CEEEEecCCC-CCcccceEeCC-CEEEEECCCCcEEEEECCCC
Confidence 2578899999887 5666665432 22221112223 68888999999999999999
Q ss_pred CeeEEEEecCCCCcE-EEEEEcCCCCcEEE
Q 010748 438 QPSCIASRNPKAGAV-FSVAFSEDSPFVLA 466 (502)
Q Consensus 438 ~~~~~~~~~~~~~~v-~~~~~spd~~~ll~ 466 (502)
+. +..+....+.+ .-+.|..+|+..++
T Consensus 518 ~~--lW~~~~~~g~~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 518 KE--LWKFQTGSGIVSPPITWEQDGEQYLG 545 (582)
T ss_dssp CE--EEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred CE--EEEecCCCCcccCceEEEECCEEEEE
Confidence 84 44443322211 12556667753333
No 285
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.98 E-value=0.0014 Score=64.71 Aligned_cols=200 Identities=7% Similarity=0.084 Sum_probs=119.1
Q ss_pred cceeeEEeccC--CCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCC---C-cEEEEecC
Q 010748 267 DSVLGLAWNKE--FRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD---R-SVVMKDAR 340 (502)
Q Consensus 267 ~~V~~l~~~~~--~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~d---g-~i~iwd~~ 340 (502)
....+|+|.|+ .+ .|+.+...+.|+.+++.+++...... .......|+|++++ +++++.... . .+..++..
T Consensus 139 ~~P~gvavd~~s~~g-~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG-~lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYD-DLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNG-DMVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp SCCCEEEECTTTTTC-EEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTC-CEEEEECCSCTTSEEEEEECGG
T ss_pred CCCceEEEccccCCC-EEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCC-CEEEEcCCCCcccceEEEEECC
Confidence 34678999984 34 45455444899999998877654433 45568999999999 555544321 1 23333332
Q ss_pred CCCCccceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEE-e-ccCCCeeEEEEcCCCCC
Q 010748 341 ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-H-AHDKAVCTISYNPLVPN 418 (502)
Q Consensus 341 ~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~-~-~h~~~v~~l~~sp~~~~ 418 (502)
.................++++|....++++-..++.|+.++..++ .....+ . .....-..++|+|++..
T Consensus 216 ~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g---------~~~~~~~~~~~~~~~~~ia~dpdG~~ 286 (433)
T 4hw6_A 216 SGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATG---------TLTEEEVMMDTKGSNFHIVWHPTGDW 286 (433)
T ss_dssp GTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTC---------CEEEEEEECSCCSSCEEEEECTTSSE
T ss_pred CCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCC---------eEEEEEeccCCCCCcccEEEeCCCCE
Confidence 221111122234556778899954556666667788999998754 221111 1 11223346999999833
Q ss_pred EEEEEeCCCcEEEEECCC--CCe---eEEEEecC------------CCCcEEEEEE---------cCCCCcEEEEEeCCC
Q 010748 419 LLATGSTDKMVKLWDLSN--NQP---SCIASRNP------------KAGAVFSVAF---------SEDSPFVLAIGGSKG 472 (502)
Q Consensus 419 ~l~t~s~dg~i~vwd~~~--~~~---~~~~~~~~------------~~~~v~~~~~---------spd~~~ll~sg~~dg 472 (502)
++++-...+.|+.+++.. +.. ..+....+ .......+++ .+++. ++++-...+
T Consensus 287 LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~-lyvaD~~n~ 365 (433)
T 4hw6_A 287 AYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD-FYFCDRDSH 365 (433)
T ss_dssp EEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE-EEEEETTTT
T ss_pred EEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc-EEEEECCCC
Confidence 666666678899988653 221 11111101 1124677999 67776 566666678
Q ss_pred cEEEEEC
Q 010748 473 KLEIWDT 479 (502)
Q Consensus 473 ~i~vwd~ 479 (502)
+|+.++.
T Consensus 366 ~I~~~~~ 372 (433)
T 4hw6_A 366 TVRVLTP 372 (433)
T ss_dssp EEEEECT
T ss_pred EEEEECC
Confidence 8999885
No 286
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.95 E-value=0.0025 Score=65.87 Aligned_cols=208 Identities=9% Similarity=0.082 Sum_probs=128.9
Q ss_pred cceeeEEeccCCCcEEEEEecCCcEEEEeCCCCee-eEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCc
Q 010748 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKC-NLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS 345 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~-~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~ 345 (502)
..+..|+|++.++.++.+-...+.|..+++..... ...+...-.....|++.+.+.+++++-...+.|.+.++......
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~ 119 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 119 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEE
Confidence 45789999987565555655678899999875532 22333333578899999977567777777899999999865443
Q ss_pred cceEeecCCeeEEEeCCCCCCEEEEEe-CCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEe
Q 010748 346 GFKWAVAADVESLAWDPHAEHSFVVSL-EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS 424 (502)
Q Consensus 346 ~~~~~~~~~v~~v~~~~~~~~~~~~~~-~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s 424 (502)
......-.....++++|.+..++++-. ..+.|...++... .........-...+.|++++....+.++-+
T Consensus 120 ~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~---------~~~~l~~~~~~~P~Glald~~~~~LY~aD~ 190 (619)
T 3s94_A 120 VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS---------SRFIIINSEIYWPNGLTLDYEEQKLYWADA 190 (619)
T ss_dssp EEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSC---------SCEEEECSSCSSEEEEEEETTTTEEEEEET
T ss_pred EEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCC---------ceEEEEeCCCCCCcEEEEEccCCEEEEEeC
Confidence 322233445778999987664445442 2466777776532 111222223456789999987646666666
Q ss_pred CCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccc
Q 010748 425 TDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 487 (502)
Q Consensus 425 ~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~ 487 (502)
..+.|..+++.......+.. ........+++..+ +++.+-...+.|...|..+++.+..
T Consensus 191 ~~~~I~~~~~dG~~~~~~~~--~~~~~P~gi~~~~~--~ly~td~~~~~V~~~d~~tg~~~~~ 249 (619)
T 3s94_A 191 KLNFIHKSNLDGTNRQAVVK--GSLPHPFALTLFED--ILYWTDWSTHSILACNKYTGEGLRE 249 (619)
T ss_dssp TTCCEEEESSSCCEEC-----------CCCEEESSS--EEEEECTTTCSEEEEESSSCCCCEE
T ss_pred CCCeEEEecCCCCccEEEEe--CCCCCceEEEEeCC--EEEEecCCCCEEEEEECCCCcccEE
Confidence 67889999987654322222 11222356777766 4677666778899999888765543
No 287
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.94 E-value=0.0014 Score=64.52 Aligned_cols=157 Identities=11% Similarity=0.155 Sum_probs=98.8
Q ss_pred cceeeEEecc-CCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeC-CC----cEEEEecC
Q 010748 267 DSVLGLAWNK-EFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSF-DR----SVVMKDAR 340 (502)
Q Consensus 267 ~~V~~l~~~~-~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~-dg----~i~iwd~~ 340 (502)
.....|+|+| +.+ .|+.+...+.|+.+|+..++...... .......|+|++++ ++|+++.. ++ .+.+++..
T Consensus 137 ~~P~~lavdp~~~g-~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G-~~lyvad~~~~~~~~~v~~~~~~ 213 (430)
T 3tc9_A 137 GGAVWLSFDPKNHN-HLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEA-DSMIITNDQNNNDRPNNYILTRE 213 (430)
T ss_dssp SCCCEEEEETTEEE-EEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTS-SEEEEEECCSCTTSEEEEEEEGG
T ss_pred CCCCEEEECCCCCC-eEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCC-CEEEEEeCCCCcccceEEEEeCC
Confidence 3567899997 434 45555554889999998776544433 45668899999999 64444443 22 23334433
Q ss_pred CCCCc-cceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCc-cceEEeccCCCeeEEEEcCCCCC
Q 010748 341 ISTHS-GFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQ-SSFTLHAHDKAVCTISYNPLVPN 418 (502)
Q Consensus 341 ~~~~~-~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~-~~~~~~~h~~~v~~l~~sp~~~~ 418 (502)
.... ............++++|.+..++++-...+.|+.|+..... . .+... ........++|+|++..
T Consensus 214 -g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~--------~~~~~~~-~~~~~P~gia~~pdG~~ 283 (430)
T 3tc9_A 214 -SGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQE--------TTPLFTI-QDSGWEFHIQFHPSGNY 283 (430)
T ss_dssp -GTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTE--------EEEEEEC-SSSSCCEEEEECTTSSE
T ss_pred -CceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCc--------EEEEEEc-CCCCcceeEEEcCCCCE
Confidence 2222 11222345577889999555566677778899999987541 1 11111 12234678999999833
Q ss_pred EEEEEeCCCcEEEEECCC
Q 010748 419 LLATGSTDKMVKLWDLSN 436 (502)
Q Consensus 419 ~l~t~s~dg~i~vwd~~~ 436 (502)
++++-...+.|..++...
T Consensus 284 lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 284 AYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEEEETTTTEEEEEEEET
T ss_pred EEEEECCCCEEEEEeCCc
Confidence 666666778899987653
No 288
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.93 E-value=0.0025 Score=63.30 Aligned_cols=212 Identities=8% Similarity=0.076 Sum_probs=119.7
Q ss_pred cceeeEEe-------ccCCCcEEEEEecCC------cEEEEeCCC-Ceee-----EeeccCCCCeEEEEEcCCCCcEEEE
Q 010748 267 DSVLGLAW-------NKEFRNILASASADK------QVKIWDVAA-GKCN-----LTLEHHTDKVQAVAWNHHSPQILLS 327 (502)
Q Consensus 267 ~~V~~l~~-------~~~~~~~l~sgs~dg------~v~vwd~~~-~~~~-----~~~~~h~~~v~~l~~~~~~~~~l~s 327 (502)
.....|+| ++++..++++...++ .|.+.+... +... ..+... .....++.+|.+..++++
T Consensus 186 ~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvt 264 (496)
T 3kya_A 186 NRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFN 264 (496)
T ss_dssp SBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEE
T ss_pred CCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEE
Confidence 46889999 999553444443332 266665333 2221 122211 234577889966577777
Q ss_pred EeCCCcEEEEecC-------CCCC-----------ccceEee--cCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCC
Q 010748 328 GSFDRSVVMKDAR-------ISTH-----------SGFKWAV--AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKS 387 (502)
Q Consensus 328 ~s~dg~i~iwd~~-------~~~~-----------~~~~~~~--~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~ 387 (502)
-..++.|..+|+. ++.. ....... ......++|+|++..++++-+....|+.++......
T Consensus 265 d~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~ 344 (496)
T 3kya_A 265 SYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKK 344 (496)
T ss_dssp ETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTT
T ss_pred ECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcc
Confidence 7788899999997 4443 0011222 244678999998864455556778898866543210
Q ss_pred CCCCCCCccceEEecc---C------------CCee-EEEEc-------CCCCCEEEEEeCCCcEEEEECCCCCeeEEEE
Q 010748 388 DPDSTSQQSSFTLHAH---D------------KAVC-TISYN-------PLVPNLLATGSTDKMVKLWDLSNNQPSCIAS 444 (502)
Q Consensus 388 ~~~~~~~~~~~~~~~h---~------------~~v~-~l~~s-------p~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~ 444 (502)
. ......+.+. . .... .++.. +.+ .++++-...+.|+.++. ++....+.-
T Consensus 345 ~-----~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g-~lyVaD~~N~rIr~i~~-~G~v~TiaG 417 (496)
T 3kya_A 345 E-----FITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEY-DFYFVDRLNFCVRKVTP-EGIVSTYAG 417 (496)
T ss_dssp E-----ECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCE-EEEEEEGGGTEEEEECT-TCBEEEEEE
T ss_pred e-----ecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCC-eEEEEECCCCEEEEEeC-CCCEEEEec
Confidence 0 0000112111 0 1223 44443 334 66666667788999984 454322221
Q ss_pred ec-----------C----------CCCcEEEEEEcCC-CCcEEEEEeCCCcEEEEECCCCccccc
Q 010748 445 RN-----------P----------KAGAVFSVAFSED-SPFVLAIGGSKGKLEIWDTLSDAGISN 487 (502)
Q Consensus 445 ~~-----------~----------~~~~v~~~~~spd-~~~ll~sg~~dg~i~vwd~~~~~~~~~ 487 (502)
.. + .-.....|+++++ +. |+++=..+.+|+.+++....++..
T Consensus 418 ~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~-lyVaD~~N~rIrki~~~~~~~~~~ 481 (496)
T 3kya_A 418 RGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEM-FYVHDQVGHTIRTISMEQEENVAG 481 (496)
T ss_dssp SCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTE-EEEEETTTTEEEEEEECCCC----
T ss_pred ccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCE-EEEEeCCCCEEEEEECCCCccccc
Confidence 10 1 1124678999997 65 666666778999999988776654
No 289
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.92 E-value=0.0047 Score=55.71 Aligned_cols=203 Identities=13% Similarity=0.159 Sum_probs=120.3
Q ss_pred cccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCC--cceeeeecCCCCCCCCCCEEEEecC
Q 010748 140 EDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAF--PLCMAWLDCPLKDREKGNFMAVGSM 217 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~s~~~~~la~g~~ 217 (502)
.++..+++.|++..|.+..... -.|+.++... .+.. ..++..+ +=.+++ .+++.++++.-.
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~----~~I~~ld~~g----~v~~--~i~l~g~~D~EGIa~-------~~~g~~~vs~E~ 89 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKP----AAIVEMTTNG----DLIR--TIPLDFVKDLETIEY-------IGDNQFVISDER 89 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETT----EEEEEEETTC----CEEE--EEECSSCSSEEEEEE-------CSTTEEEEEETT
T ss_pred cCcceeEEeCCCCEEEEEECCC----CeEEEEeCCC----CEEE--EEecCCCCChHHeEE-------eCCCEEEEEECC
Confidence 4689999999988777766553 2788888763 2221 1122211 123333 466777666656
Q ss_pred CCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeCC
Q 010748 218 EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVA 297 (502)
Q Consensus 218 dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~ 297 (502)
++.+.++++........... .........+....-.|+|+|.+. .|+++.......||.+.
T Consensus 90 ~~~l~~~~v~~~~~i~~~~~------------------~~~~~~~~~~N~g~EGLA~d~~~~-~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 90 DYAIYVISLTPNSEVKILKK------------------IKIPLQESPTNCGFEGLAYSRQDH-TFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp TTEEEEEEECTTCCEEEEEE------------------EECCCSSCCCSSCCEEEEEETTTT-EEEEEEESSSEEEEEEE
T ss_pred CCcEEEEEcCCCCeeeeeee------------------eccccccccccCCcceEEEeCCCC-EEEEEECcCCceEEEEc
Confidence 68888988864322110000 000000113455689999999854 55555554455555543
Q ss_pred ---CCeeeEee-------ccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEeec----------CCeeE
Q 010748 298 ---AGKCNLTL-------EHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVA----------ADVES 357 (502)
Q Consensus 298 ---~~~~~~~~-------~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~----------~~v~~ 357 (502)
..+.+..+ ..+...+.+++++|...++++.+...+.|..+|.... ... ..... .....
T Consensus 151 g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~~~-~~~L~~g~~~l~~~~~qpEG 228 (255)
T 3qqz_A 151 GLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE-VIG-EMSLTKGSRGLSHNIKQAEG 228 (255)
T ss_dssp STTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEE-EEECSTTGGGCSSCCCSEEE
T ss_pred ccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-EEE-EEEcCCccCCcccccCCCCe
Confidence 11112222 1134467899999998788888888899999997754 222 22222 36789
Q ss_pred EEeCCCCCCEEEEEeCCCcEEEEEC
Q 010748 358 LAWDPHAEHSFVVSLEDGTIKGFDI 382 (502)
Q Consensus 358 v~~~~~~~~~~~~~~~dg~v~i~d~ 382 (502)
|+|.++|. +++.++.+.++.|.-
T Consensus 229 ia~d~~G~--lyIvsE~n~~y~f~~ 251 (255)
T 3qqz_A 229 VAMDASGN--IYIVSEPNRFYRFTP 251 (255)
T ss_dssp EEECTTCC--EEEEETTTEEEEEEC
T ss_pred eEECCCCC--EEEEcCCceEEEEEe
Confidence 99999874 555577776666643
No 290
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.89 E-value=0.0038 Score=66.16 Aligned_cols=161 Identities=11% Similarity=-0.014 Sum_probs=102.3
Q ss_pred cceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCC-CcEEEEecCCCCCc
Q 010748 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD-RSVVMKDARISTHS 345 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~d-g~i~iwd~~~~~~~ 345 (502)
.....|++.+.+++++++-...+.|.+.++........+...-.....|++.|.++.++++-... +.|...++......
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~ 550 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 550 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE
Confidence 45678888887677777777889999999875544333333445688999999863544444333 67888888654433
Q ss_pred cceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEec--cCCCeeEEEEcCCCCCEEEEE
Q 010748 346 GFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA--HDKAVCTISYNPLVPNLLATG 423 (502)
Q Consensus 346 ~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~sp~~~~~l~t~ 423 (502)
......-.....|++++.+..++++-...+.|..+++... .....+.. .-....+|++.. ..++++-
T Consensus 551 ~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~---------~~~~v~~~~~~l~~P~glav~~--~~lYwtD 619 (791)
T 3m0c_C 551 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG---------NRKTILEDEKRLAHPFSLAVFE--DKVFWTD 619 (791)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---------SCEEEEECTTTTSSEEEEEEET--TEEEEEE
T ss_pred EEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC---------ceEEEecCCCccCCCCEEEEeC--CEEEEEE
Confidence 2222223468889999877655555566778999998653 11122222 122345666643 3566666
Q ss_pred eCCCcEEEEECCCCC
Q 010748 424 STDKMVKLWDLSNNQ 438 (502)
Q Consensus 424 s~dg~i~vwd~~~~~ 438 (502)
...+.|...+..+++
T Consensus 620 ~~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 620 IINEAIFSANRLTGS 634 (791)
T ss_dssp TTTTEEEEEETTTCC
T ss_pred CCCCEEEEEeCCCCc
Confidence 667888888876654
No 291
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.85 E-value=0.00016 Score=76.09 Aligned_cols=162 Identities=10% Similarity=-0.016 Sum_probs=99.0
Q ss_pred ceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCC-CcEEEEecCCCCCcc
Q 010748 268 SVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD-RSVVMKDARISTHSG 346 (502)
Q Consensus 268 ~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~d-g~i~iwd~~~~~~~~ 346 (502)
....|++.+.+++++++-...+.|.++++........+.........|++.|.+..++++-... +.|..+++.......
T Consensus 454 ~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~ 533 (699)
T 1n7d_A 454 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 533 (699)
T ss_dssp -CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCE
T ss_pred CcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeE
Confidence 3556788765566666666678999999875544333333334567889999764555544333 678887776433222
Q ss_pred ceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCC
Q 010748 347 FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD 426 (502)
Q Consensus 347 ~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~d 426 (502)
.....-.....|+|+|.+..++++-+..+.|..+++.... ...+......-....+|++.. ..++++....
T Consensus 534 l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~-------~~~~~~~~~~~~~P~glavd~--~~lywtd~~~ 604 (699)
T 1n7d_A 534 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-------RKTILEDEKRLAHPFSLAVFE--DKVFWTDIIN 604 (699)
T ss_dssp ESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSC-------CEEECCCSSSCSSCCCCEEET--TEEEEECSTT
T ss_pred EEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCc-------eEEEEecCCcCCCceEeEEEC--CEEEEEeCCC
Confidence 1111224467899999877777777778899999986431 011111111122344556654 2566676677
Q ss_pred CcEEEEECCCCC
Q 010748 427 KMVKLWDLSNNQ 438 (502)
Q Consensus 427 g~i~vwd~~~~~ 438 (502)
+.|..++..+++
T Consensus 605 ~~V~~~d~~~G~ 616 (699)
T 1n7d_A 605 EAIFSANRLTGS 616 (699)
T ss_dssp TCEEEEETTTEE
T ss_pred CeEEEEEccCCC
Confidence 889999987765
No 292
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.78 E-value=0.0058 Score=60.67 Aligned_cols=218 Identities=12% Similarity=0.073 Sum_probs=124.6
Q ss_pred ceeeEEecc-CCCcEEEEEecCCcEEEEeCCCCeeeEeeccC---CCCeEEEEE-------cCCCCcEEEEEeCCC----
Q 010748 268 SVLGLAWNK-EFRNILASASADKQVKIWDVAAGKCNLTLEHH---TDKVQAVAW-------NHHSPQILLSGSFDR---- 332 (502)
Q Consensus 268 ~V~~l~~~~-~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h---~~~v~~l~~-------~~~~~~~l~s~s~dg---- 332 (502)
....|+|.| +.++++++....+.|++.|+.++.....+... ......|+| ++++ ..|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G-~~lyvad~~~~~~~ 218 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEA-EYMIVAIDYDGKGD 218 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTT-CEEEEEECCCTTGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCC-CEEEEEeCCCCCcc
Confidence 467899998 44545555554577999999887765544321 235889999 9999 5455554443
Q ss_pred ---cEEEEecCC-CCCcc----ceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECC-------CCCCCCC-----CC
Q 010748 333 ---SVVMKDARI-STHSG----FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR-------TAKSDPD-----ST 392 (502)
Q Consensus 333 ---~i~iwd~~~-~~~~~----~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~-------~~~~~~~-----~~ 392 (502)
.|.+++... +.... ...........++.+|.+..++++-...+.|+.+|+. ++..... ..
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred cCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 266665333 12210 1222334567888999777777788888999999987 4421000 00
Q ss_pred CCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCC--CCe---eEEEEecCC------------CCcEE-E
Q 010748 393 SQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN--NQP---SCIASRNPK------------AGAVF-S 454 (502)
Q Consensus 393 ~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~--~~~---~~~~~~~~~------------~~~v~-~ 454 (502)
....+... ........|+|+|++..++++-+..+.|+.++... +.. ..+.-..+. ..... .
T Consensus 299 ~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~g 377 (496)
T 3kya_A 299 TFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQG 377 (496)
T ss_dssp TEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEE
T ss_pred ccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEE
Confidence 00011111 22344679999999832555556678899866533 221 112111111 11234 4
Q ss_pred EEEc-------CCCCcEEEEEeCCCcEEEEECCCCcccccccc
Q 010748 455 VAFS-------EDSPFVLAIGGSKGKLEIWDTLSDAGISNRFS 490 (502)
Q Consensus 455 ~~~s-------pd~~~ll~sg~~dg~i~vwd~~~~~~~~~~~~ 490 (502)
++.. +++. ++++=..+.+|+.++. ++ .+.++.+
T Consensus 378 v~vd~~~~~~~~~g~-lyVaD~~N~rIr~i~~-~G-~v~TiaG 417 (496)
T 3kya_A 378 VFVKNPDYTGEEEYD-FYFVDRLNFCVRKVTP-EG-IVSTYAG 417 (496)
T ss_dssp EEEECTTCCSSCCEE-EEEEEGGGTEEEEECT-TC-BEEEEEE
T ss_pred EEEccccccccCCCe-EEEEECCCCEEEEEeC-CC-CEEEEec
Confidence 4554 4555 5666667788999983 44 4444443
No 293
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.76 E-value=0.0059 Score=56.84 Aligned_cols=203 Identities=10% Similarity=0.037 Sum_probs=118.7
Q ss_pred ceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEe-ecc----CC--CCeEEEEE---cCCCCcEEEEEe--------
Q 010748 268 SVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLT-LEH----HT--DKVQAVAW---NHHSPQILLSGS-------- 329 (502)
Q Consensus 268 ~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~-~~~----h~--~~v~~l~~---~~~~~~~l~s~s-------- 329 (502)
---+++|.+..+.++++.-..++|..|+...+..... +.+ .. ..+..|.| .|.+ +++++..
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~g-rL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSK-RLFAVMKNAKSFNFA 92 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCC-EEEEEEEETTTTCTT
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCC-cEEEEEccccccccc
Confidence 3457899887454444444789999999876543332 322 11 14579999 5776 7777544
Q ss_pred -----CCCcEEEEecC---CCCCccceE--e-----------ecCCeeEEEeCCCCCCEEEEEeCC-CcEEEEECCCCCC
Q 010748 330 -----FDRSVVMKDAR---ISTHSGFKW--A-----------VAADVESLAWDPHAEHSFVVSLED-GTIKGFDIRTAKS 387 (502)
Q Consensus 330 -----~dg~i~iwd~~---~~~~~~~~~--~-----------~~~~v~~v~~~~~~~~~~~~~~~d-g~v~i~d~~~~~~ 387 (502)
.++.|..||+. +++.....- . .......++..++|. ..++++.. +.|..++.....
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~~~~~I~rV~pdG~~- 170 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFALGMPAIARVSADGKT- 170 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEESSCEEEEECTTSCC-
T ss_pred ccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCC-EEEeCCCCCCeEEEEeCCCCE-
Confidence 26779999998 555432111 0 112477899999865 66667777 777666655320
Q ss_pred CCCCCCCccceEEe----ccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEe-cC---CCCcEEEE-EEc
Q 010748 388 DPDSTSQQSSFTLH----AHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASR-NP---KAGAVFSV-AFS 458 (502)
Q Consensus 388 ~~~~~~~~~~~~~~----~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~-~~---~~~~v~~~-~~s 458 (502)
...+-+. ......+.|+++|++ ++|++....|.|..+|+.......+... .+ .......+ ..-
T Consensus 171 -------~~~~~~~~~~~~~~~G~nGIv~~pdg-~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~ 242 (334)
T 2p9w_A 171 -------VSTFAWESGNGGQRPGYSGITFDPHS-NKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVP 242 (334)
T ss_dssp -------EEEEEECCCCSSSCCSCSEEEEETTT-TEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEE
T ss_pred -------EeeeeecCCCcccccCcceEEEeCCC-CEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccc
Confidence 1111111 112347799999998 6666665599999999985321012111 01 11123343 333
Q ss_pred CCCCcEEEEEeCCCcEEEEECCC
Q 010748 459 EDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 459 pd~~~ll~sg~~dg~i~vwd~~~ 481 (502)
.+|.-+|++.+..+.+.+.+...
T Consensus 243 ~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 243 VGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp ETTEEEEEEEETTEEEEEECSST
T ss_pred cCCEEEEEEcCCCCEEEEECCCC
Confidence 46664466666666655555433
No 294
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.73 E-value=0.015 Score=55.44 Aligned_cols=240 Identities=11% Similarity=0.114 Sum_probs=121.3
Q ss_pred CcceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceee
Q 010748 192 FPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLG 271 (502)
Q Consensus 192 ~~~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 271 (502)
.|..++| .|+|+++++ ...|.|++++ + +. ..+.. ... ...........
T Consensus 32 ~P~~ia~-------~pdG~l~V~-e~~g~I~~i~-~-g~-~~~~~--------------------~~~-v~~~g~~~p~g 79 (352)
T 2ism_A 32 VPWALAF-------LPDGGMLIA-ERPGRIRLFR-E-GR-LSTYA--------------------ELS-VYHRGESGLLG 79 (352)
T ss_dssp CEEEEEE-------CTTSCEEEE-ETTTEEEEEE-T-TE-EEEEE--------------------ECC-CCCSTTCSEEE
T ss_pred CceEEEE-------cCCCeEEEE-eCCCeEEEEE-C-CC-ccEee--------------------cce-EeecCCCCcee
Confidence 3556666 688985555 4569999988 3 11 11100 000 11122356789
Q ss_pred EEeccC---CCcEEEEEecC-----CcEEEEeCCCCe-----ee-Eeec---cCCCCeEEEEEcCCCCcEEEEEeC----
Q 010748 272 LAWNKE---FRNILASASAD-----KQVKIWDVAAGK-----CN-LTLE---HHTDKVQAVAWNHHSPQILLSGSF---- 330 (502)
Q Consensus 272 l~~~~~---~~~~l~sgs~d-----g~v~vwd~~~~~-----~~-~~~~---~h~~~v~~l~~~~~~~~~l~s~s~---- 330 (502)
|+|+|+ ++.++++-+.. +.|..|++..++ .+ ..+. ........|+|.|++ .++++.+.
T Consensus 80 ia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~G~~~~~ 158 (352)
T 2ism_A 80 LALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG-MLYVTTGEVYER 158 (352)
T ss_dssp EEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTS-CEEEECCCTTCG
T ss_pred EEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCC-CEEEEECCCCCC
Confidence 999997 45455444432 578888876431 11 2232 111233689999999 65555432
Q ss_pred ---------CCcEEEEecCCCC-----------CccceEeec-CCeeEEEeCCCCCCEEEEEeCCCcE------EEEECC
Q 010748 331 ---------DRSVVMKDARIST-----------HSGFKWAVA-ADVESLAWDPHAEHSFVVSLEDGTI------KGFDIR 383 (502)
Q Consensus 331 ---------dg~i~iwd~~~~~-----------~~~~~~~~~-~~v~~v~~~~~~~~~~~~~~~dg~v------~i~d~~ 383 (502)
.|.|.-++....- .....+... .....++|+|....++++-.....+ .+.-+.
T Consensus 159 ~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~ 238 (352)
T 2ism_A 159 ELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIV 238 (352)
T ss_dssp GGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEEC
T ss_pred ccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEec
Confidence 2456666654310 011122221 2366789999544455554333331 122222
Q ss_pred CCCC-CC--------CCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCee----EEEEecCCCC
Q 010748 384 TAKS-DP--------DSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS----CIASRNPKAG 450 (502)
Q Consensus 384 ~~~~-~~--------~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~----~~~~~~~~~~ 450 (502)
.+.. .+ ......++..+. +......++|. .+ .++++....+.|...++...... ....+....+
T Consensus 239 ~G~nyGwp~~~g~~~~~~~~~p~~~~~-~~~ap~G~~~~-~G-~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~ 315 (352)
T 2ism_A 239 PGGNYGWPRVVGRGNDPRYRDPLYFWP-QGFPPGNLAFF-RG-DLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFG 315 (352)
T ss_dssp TTCBCCTTTCCSCCCCTTSCCCSEECT-TCCCEEEEEEE-TT-EEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSC
T ss_pred cCCcCCCCcccCCCCCCCCcCCeEecC-CCCCCcceEEE-CC-EEEEEECCCCEEEEEEECCCCcceeecchheecccCC
Confidence 2210 00 000013444443 33346778884 34 66666656677887777643310 0111112236
Q ss_pred cEEEEEEcCCCCcEEEEE
Q 010748 451 AVFSVAFSEDSPFVLAIG 468 (502)
Q Consensus 451 ~v~~~~~spd~~~ll~sg 468 (502)
.+..+++.|||. ++++.
T Consensus 316 rp~~v~~~pdG~-lyv~~ 332 (352)
T 2ism_A 316 RLREVQVGPDGA-LYVTT 332 (352)
T ss_dssp CEEEEEECTTSC-EEEEE
T ss_pred CeeEEEECCCCc-EEEEE
Confidence 789999999997 45544
No 295
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.66 E-value=0.041 Score=51.81 Aligned_cols=195 Identities=10% Similarity=0.050 Sum_probs=101.5
Q ss_pred cceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEe-eccCCCCeEEEEEcCCCCcEEEEEeCCCcEEE-EecCCCCC
Q 010748 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLT-LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVM-KDARISTH 344 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~-~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~i-wd~~~~~~ 344 (502)
..+..|.+.++ +.+++++ .+|.|..- ...|+.-.. ...+...+.++.+.+.+ .+++++ ..|.+.. .|-....-
T Consensus 122 ~~~~~i~~~~~-~~~~~~~-~~g~v~~S-~DgG~tW~~~~~~~~~~~~~~~~~~~~-~~~~~g-~~G~~~~S~d~gG~tW 196 (327)
T 2xbg_A 122 GSPRLIKALGN-GSAEMIT-NVGAIYRT-KDSGKNWQALVQEAIGVMRNLNRSPSG-EYVAVS-SRGSFYSTWEPGQTAW 196 (327)
T ss_dssp SCEEEEEEEET-TEEEEEE-TTCCEEEE-SSTTSSEEEEECSCCCCEEEEEECTTS-CEEEEE-TTSSEEEEECTTCSSC
T ss_pred CCeEEEEEECC-CCEEEEe-CCccEEEE-cCCCCCCEEeecCCCcceEEEEEcCCC-cEEEEE-CCCcEEEEeCCCCCce
Confidence 34677777665 4455554 45654321 122322222 23455678999999987 666555 4455443 33211111
Q ss_pred ccceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEE-eccCCCeeEEEEcCCCCCEEEEE
Q 010748 345 SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLLATG 423 (502)
Q Consensus 345 ~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l~t~ 423 (502)
..........+..+.+.+++. +++.+.+|.+++.....+.. ...+..- ..+...+.++.+.+.+ .+++++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~g~--~~~~~~~G~~~~s~~D~G~t------W~~~~~~~~~~~~~~~~v~~~~~~-~~~~~g 267 (327)
T 2xbg_A 197 EPHNRTTSRRLHNMGFTPDGR--LWMIVNGGKIAFSDPDNSEN------WGELLSPLRRNSVGFLDLAYRTPN-EVWLAG 267 (327)
T ss_dssp EEEECCSSSCEEEEEECTTSC--EEEEETTTEEEEEETTEEEE------ECCCBCTTSSCCSCEEEEEESSSS-CEEEEE
T ss_pred eECCCCCCCccceeEECCCCC--EEEEeCCceEEEecCCCCCe------eEeccCCcccCCcceEEEEecCCC-EEEEEe
Confidence 111112345678888888653 55566678877764221100 0000000 0122357888898865 555554
Q ss_pred eCCCcEEEEECCCCCeeEEEEe-cCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEEC
Q 010748 424 STDKMVKLWDLSNNQPSCIASR-NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 479 (502)
Q Consensus 424 s~dg~i~vwd~~~~~~~~~~~~-~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~ 479 (502)
.++.| ++....++.-..... ......+.++.|.+++. +++++.+|.|.-++-
T Consensus 268 -~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~--~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 268 -GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ--GFILGQKGILLRYVT 320 (327)
T ss_dssp -STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE--EEEECSTTEEEEECC
T ss_pred -CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc--eEEEcCCceEEEEcC
Confidence 46766 455554442111111 12235578888876554 556778898776653
No 296
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.66 E-value=0.035 Score=51.27 Aligned_cols=198 Identities=11% Similarity=0.133 Sum_probs=128.2
Q ss_pred EeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEe-e
Q 010748 273 AWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA-V 351 (502)
Q Consensus 273 ~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-~ 351 (502)
-.||. .++||.-. ..++.|+|+++.+.+..+.. ...|.--.|-... .|+-.+ +..|+-|++.....+...+. +
T Consensus 73 IMnP~-~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~--~L~lVT-~taVyHWs~~~~s~P~kvFdR~ 146 (365)
T 2xzh_A 73 IMNPA-SKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN--TVALVT-DNAVYHWSMEGESQPVKMFDRH 146 (365)
T ss_dssp EECSS-SSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSS--EEEEEE-SSEEEEEESSTTCCCEEEEECC
T ss_pred eeCCC-ccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCC--eEEEEc-CCcEEEEcccCCCCCceeeecc
Confidence 34787 56776665 67899999999998888874 5678888887665 444433 56899999986544433332 2
Q ss_pred ----cCCeeEEEeCCCCCCEEEEEe------CCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCC--CCCE
Q 010748 352 ----AADVESLAWDPHAEHSFVVSL------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPL--VPNL 419 (502)
Q Consensus 352 ----~~~v~~v~~~~~~~~~~~~~~------~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~--~~~~ 419 (502)
...|.....+++...++++|- -.|.+.+|.... ...+.+.+|...-..+.+.-+ ...+
T Consensus 147 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er----------~~sQ~ieGhaa~F~~~~~~g~~~~~~l 216 (365)
T 2xzh_A 147 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR----------KVSQPIEGHAASFAQFKMEGNAEESTL 216 (365)
T ss_dssp GGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT----------TEEEEECCSEEEEEEECCTTCSSCEEE
T ss_pred hhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc----------cccceeeeeeeeeEEEecCCCCCCceE
Confidence 345777778888777777764 346789999885 345666677554433333211 1123
Q ss_pred EEEEeC---CCcEEEEECCCC---Ce----eEEE-Eec--CCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccc
Q 010748 420 LATGST---DKMVKLWDLSNN---QP----SCIA-SRN--PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 420 l~t~s~---dg~i~vwd~~~~---~~----~~~~-~~~--~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~ 486 (502)
++.+.. .+.++|-++... .+ ..+- .+. .......++..++... ++..-+.-|.|++||+.++.++.
T Consensus 217 f~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kyg-viyviTK~G~ihlyDleTgt~i~ 295 (365)
T 2xzh_A 217 FCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGTCIY 295 (365)
T ss_dssp EEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTTCCEEE
T ss_pred EEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCC-EEEEEeCCcEEEEEEcccCcEEE
Confidence 333333 257889988443 11 0111 111 1244566888888877 57778899999999999999874
Q ss_pred c
Q 010748 487 N 487 (502)
Q Consensus 487 ~ 487 (502)
.
T Consensus 296 ~ 296 (365)
T 2xzh_A 296 M 296 (365)
T ss_dssp E
T ss_pred E
Confidence 3
No 297
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.63 E-value=0.052 Score=60.08 Aligned_cols=291 Identities=11% Similarity=0.120 Sum_probs=145.4
Q ss_pred ccccccccccCC------CceEEEEEe-cCCcceeEEEEEecCCCCCCCeeeeecccc--CCCcceeeeecCCCCCCCCC
Q 010748 139 SEDLEDMTINPN------DAVIVCARN-EDDVSHLEVYILEESDGGDPNLYVHHHIII--PAFPLCMAWLDCPLKDREKG 209 (502)
Q Consensus 139 ~~~v~~~~~~p~------~~~l~~~~~-~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~s~~~ 209 (502)
+.+|.|+.+.|. .+++++|.. ++ .++|+.+.. . ... +...+ ...|..+....+ ...
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~---tv~I~sL~~--l---~~~--~~~~L~~~~~p~si~l~~~-----~~~ 617 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDI---SARILKLPS--F---ELL--HKEMLGGEIIPRSILMTTF-----ESS 617 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTT---EEEEEETTT--C---CEE--EEEECCSSCCEEEEEEEEE-----TTE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCC---EEEEEECCC--C---CeE--EEEECCCCCCCcEEEEEEe-----CCC
Confidence 457899999864 368899986 54 556655542 1 111 22223 234444433322 245
Q ss_pred CEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCC
Q 010748 210 NFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADK 289 (502)
Q Consensus 210 ~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg 289 (502)
.+|.+|-.||.+.-+.++....... .. +..+-| +.+|.-..+...++.-++++|. .
T Consensus 618 ~~L~igl~dG~l~~~~~d~~tg~l~---------------------d~-r~~~LG-~~pv~L~~~~~~~~~~V~a~s~-r 673 (1158)
T 3ei3_A 618 HYLLCALGDGALFYFGLNIETGLLS---------------------DR-KKVTLG-TQPTVLRTFRSLSTTNVFACSD-R 673 (1158)
T ss_dssp EEEEEEETTSEEEEEEECTTTCCEE---------------------EE-EEEECC-SSCCEEEEEESSSCEEEEEESS-S
T ss_pred cEEEEEeCCCeEEEEEEcCCCCccc---------------------cc-eeEEcC-CCceEEEEEeeCCceeEEEECC-C
Confidence 7899999999987777653211000 00 000111 2344433343333333333332 3
Q ss_pred cEEEEeCCCCeeeE-eeccCCCCe-EEEEEcCCC-CcEEEEEeCCCcEEEEecCCCCC-ccceEeecCCeeEEEeCCCCC
Q 010748 290 QVKIWDVAAGKCNL-TLEHHTDKV-QAVAWNHHS-PQILLSGSFDRSVVMKDARISTH-SGFKWAVAADVESLAWDPHAE 365 (502)
Q Consensus 290 ~v~vwd~~~~~~~~-~~~~h~~~v-~~l~~~~~~-~~~l~s~s~dg~i~iwd~~~~~~-~~~~~~~~~~v~~v~~~~~~~ 365 (502)
...++--+ ++... .+. -..+ ....|+... +.-++..+ ++.++|.-+..... ..........+..++++|..+
T Consensus 674 p~liy~~~-~~l~~s~l~--~~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~ 749 (1158)
T 3ei3_A 674 PTVIYSSN-HKLVFSNVN--LKEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQ 749 (1158)
T ss_dssp CEEEEESS-SSEEEEEBS--SSCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGT
T ss_pred CEEEEEcC-CceEEeccC--hHHhceEeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCC
Confidence 33334322 33221 111 1123 233454321 23344333 56699988754322 223345667788999998765
Q ss_pred CEEEEEeCC------------------------------------------------CcEEEEECCCCCCCCCCCCCccc
Q 010748 366 HSFVVSLED------------------------------------------------GTIKGFDIRTAKSDPDSTSQQSS 397 (502)
Q Consensus 366 ~~~~~~~~d------------------------------------------------g~v~i~d~~~~~~~~~~~~~~~~ 397 (502)
.++++.+.. +.|+++|..+. ..+
T Consensus 750 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~---------~~i 820 (1158)
T 3ei3_A 750 CFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTF---------EVL 820 (1158)
T ss_dssp EEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC----------CCCEEEEEEEEEEETTTC---------CEE
T ss_pred EEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCCC---------eEE
Confidence 333333211 12333343332 222
Q ss_pred eEEec-cCCCeeEEE---EcCCCCCEEEEEe----------CCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCc
Q 010748 398 FTLHA-HDKAVCTIS---YNPLVPNLLATGS----------TDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPF 463 (502)
Q Consensus 398 ~~~~~-h~~~v~~l~---~sp~~~~~l~t~s----------~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ 463 (502)
..+.- ....+.+++ |......+|+.|+ ..|.|.+|++...+...+.... ..++|++++--. | +
T Consensus 821 ~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~-v~g~v~al~~~~-g-~ 897 (1158)
T 3ei3_A 821 HAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKE-VKGAVYSMVEFN-G-K 897 (1158)
T ss_dssp EEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEE-ESSCEEEEEEET-T-E
T ss_pred EEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEE-cCCcCEEEeeeC-C-E
Confidence 22211 112233433 4333346888876 3478999999766554444433 468898887543 4 3
Q ss_pred EEEEEeCCCcEEEEECCCCcccc
Q 010748 464 VLAIGGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 464 ll~sg~~dg~i~vwd~~~~~~~~ 486 (502)
+|++. ..+|++|++...+.++
T Consensus 898 Lla~i--g~~l~vy~l~~~~~L~ 918 (1158)
T 3ei3_A 898 LLASI--NSTVRLYEWTTEKELR 918 (1158)
T ss_dssp EEEEE--TTEEEEEEECTTSCEE
T ss_pred EEEEc--CCEEEEEECCCCceEE
Confidence 55543 4689999998766544
No 298
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.62 E-value=0.0038 Score=64.07 Aligned_cols=192 Identities=12% Similarity=0.118 Sum_probs=118.6
Q ss_pred EEEEEec-CCcEEEEeC-CCCeeeEeeccCCCC-----------eEEEEEcCCCC---cEEEEEeCCCcEEEEecCCCCC
Q 010748 281 ILASASA-DKQVKIWDV-AAGKCNLTLEHHTDK-----------VQAVAWNHHSP---QILLSGSFDRSVVMKDARISTH 344 (502)
Q Consensus 281 ~l~sgs~-dg~v~vwd~-~~~~~~~~~~~h~~~-----------v~~l~~~~~~~---~~l~s~s~dg~i~iwd~~~~~~ 344 (502)
.|+.++. ++.|.-+|. .+|+.+.++...... ...+.+.|.+. ..++.++.++.|..+|.++++.
T Consensus 64 ~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~ 143 (599)
T 1w6s_A 64 KMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGET 143 (599)
T ss_dssp EEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCCE
T ss_pred EEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCCE
Confidence 6667777 889999999 899988877532211 12344533331 2378888999999999998875
Q ss_pred ccceEeecC-----CeeE-EEeCCCCCCEEEEEeC------CCcEEEEECCCCCCCCCCCCCccceEEeccCCC------
Q 010748 345 SGFKWAVAA-----DVES-LAWDPHAEHSFVVSLE------DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKA------ 406 (502)
Q Consensus 345 ~~~~~~~~~-----~v~~-v~~~~~~~~~~~~~~~------dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~------ 406 (502)
.-.. .... .+.+ -... +. .+++++. +|.|+.+|.+++ +.++++......
T Consensus 144 ~W~~-~~~~~~~~~~~~ssP~v~--~g-~V~vg~~g~e~g~~g~v~A~D~~TG---------~~~W~~~~~~~~~~~~~~ 210 (599)
T 1w6s_A 144 VWKV-ENSDIKVGSTLTIAPYVV--KD-KVIIGSSGAELGVRGYLTAYDVKTG---------EQVWRAYATGPDKDLLLA 210 (599)
T ss_dssp EEEE-ECCCGGGTCBCCSCCEEE--TT-EEEECCBCGGGTCCCEEEEEETTTC---------CEEEEEESSSCHHHHTBC
T ss_pred EEee-cCCCCCccceeecCCEEE--CC-EEEEEecccccCCCCeEEEEECCCC---------cEEEEEcCCCCccccccc
Confidence 4221 1111 1111 0111 22 5666653 799999999987 555555432110
Q ss_pred -------------------------------e-eEEEEcCCCCCEEEEEeCC----------------CcEEEEECCCCC
Q 010748 407 -------------------------------V-CTISYNPLVPNLLATGSTD----------------KMVKLWDLSNNQ 438 (502)
Q Consensus 407 -------------------------------v-~~l~~sp~~~~~l~t~s~d----------------g~i~vwd~~~~~ 438 (502)
+ ..+++.+.. .+++.++.+ +.|..+|..+++
T Consensus 211 p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~-g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~ 289 (599)
T 1w6s_A 211 SDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGT-NLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGE 289 (599)
T ss_dssp TTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTT-TEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCC
T ss_pred cccccccccccccccccccCCCcceecCCCccccceeEeCCC-CEEEEeCCCCccccCcccCCCccccceEEEEeCCCCc
Confidence 0 134566665 677776655 379999999998
Q ss_pred eeEEEEecCCC--------CcEEEEEEc-CCCC--cEEEEEeCCCcEEEEECCCCccccc
Q 010748 439 PSCIASRNPKA--------GAVFSVAFS-EDSP--FVLAIGGSKGKLEIWDTLSDAGISN 487 (502)
Q Consensus 439 ~~~~~~~~~~~--------~~v~~~~~s-pd~~--~ll~sg~~dg~i~vwd~~~~~~~~~ 487 (502)
..-.+....|. .++. +... .+|+ .+++.++.+|.++++|..+++.+..
T Consensus 290 ~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~ 348 (599)
T 1w6s_A 290 AKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSA 348 (599)
T ss_dssp EEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEE
T ss_pred eeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeec
Confidence 54444443332 2232 2222 4562 2577788999999999999998754
No 299
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.60 E-value=0.045 Score=56.44 Aligned_cols=203 Identities=6% Similarity=0.039 Sum_probs=125.2
Q ss_pred cceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCcc
Q 010748 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG 346 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~ 346 (502)
..+.+|+|.+..+.++.+-...+.|+.+++........+...-.....|++.+.+.+++++-+..+.|.+.++.......
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~ 428 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKI 428 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEE
Confidence 34778999986565666666678899999875443333333335677889987664677776778899999987654322
Q ss_pred ceEeecCCeeEEEeCCCCCCEEEEEe-CCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeC
Q 010748 347 FKWAVAADVESLAWDPHAEHSFVVSL-EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST 425 (502)
Q Consensus 347 ~~~~~~~~v~~v~~~~~~~~~~~~~~-~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~ 425 (502)
.....-.....++++|..+.++++-. ..+.|...++... .........-...+.|++++...++.++=+.
T Consensus 429 l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~---------~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~ 499 (619)
T 3s94_A 429 LISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGS---------DRVVLVNTSLGWPNGLALDYDEGKIYWGDAK 499 (619)
T ss_dssp EECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---------SCEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred EEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCC---------ccEEEEeCCCCCCeeeEEcccCCEEEEEECC
Confidence 22122346789999997554444432 2356777666532 1111222234567899999876455555556
Q ss_pred CCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCC
Q 010748 426 DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 426 dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~ 482 (502)
.+.|..+++.......+.. .......++++..+ +++.+-...+.|...+..++
T Consensus 500 ~~~I~~~~~dG~~~~~~~~--~~l~~P~glav~~~--~ly~tD~~~~~I~~~~k~~g 552 (619)
T 3s94_A 500 TDKIEVMNTDGTGRRVLVE--DKIPHIFGFTLLGD--YVYWTDWQRRSIERVHKRSA 552 (619)
T ss_dssp TTEEEEEESSSCCCEEEEE--CCCCSSCCEEEETT--EEEEECTTSSCEEEEESSSC
T ss_pred CCEEEEEecCCCceEEEec--cCCCCcEEEEEECC--EEEEeecCCCeEEEEEcCCC
Confidence 6789999987654332322 11222345555544 45666556667777777776
No 300
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.57 E-value=0.039 Score=57.02 Aligned_cols=207 Identities=8% Similarity=0.044 Sum_probs=128.5
Q ss_pred cceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeecc------CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecC
Q 010748 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEH------HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDAR 340 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~------h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~ 340 (502)
..+.+|+|.+..+.++.+=...+.|+.+++........+.. ....+..|++...+.++..+-+..+.|.+.++.
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~ 419 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD 419 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC
Confidence 44677888887555555555567788888764332222322 234688999998875677777788899999986
Q ss_pred CCCCccceEeecCCeeEEEeCCCCCCEEEEEeCCC--cEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCC
Q 010748 341 ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDG--TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPN 418 (502)
Q Consensus 341 ~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg--~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~ 418 (502)
.................++++|....++++-.... .|...++... .........-...+.|++.+...+
T Consensus 420 G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~---------~~~~l~~~~l~~P~gla~D~~~~~ 490 (628)
T 4a0p_A 420 GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGT---------EREVLFFSGLSKPIALALDSRLGK 490 (628)
T ss_dssp SCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSC---------SCEEEECSSCSCEEEEEEETTTTE
T ss_pred CCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCC---------CcEEEEeccCCCccEEEEeCCCCE
Confidence 54322222223456889999996554555543333 5666666532 121122223446789999997645
Q ss_pred EEEEEeCCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccc
Q 010748 419 LLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 419 ~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~ 486 (502)
+.++-+..+.|..+++.......+.. .......++++.. + +++.+-.....|...|..+++...
T Consensus 491 LYw~D~~~~~I~~~~~dG~~r~~~~~--~~~~~P~glav~~-~-~ly~tD~~~~~i~~~~k~~G~~~~ 554 (628)
T 4a0p_A 491 LFWADSDLRRIESSDLSGANRIVLED--SNILQPVGLTVFE-N-WLYWIDKQQQMIEKIDMTGREGRT 554 (628)
T ss_dssp EEEEETTTTEEEEEETTSCSCEEEEC--SSCSCEEEEEEET-T-EEEEEETTTTEEEEEETTSSSCCE
T ss_pred EEEEeCCCCEEEEEeCCCCceEEEEc--CCCCCcEEEEEEC-C-EEEEEECCCCeEEEEECcCCCCcE
Confidence 55555557889999997655322221 2334567888766 3 367776677788888888776543
No 301
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.50 E-value=0.058 Score=51.84 Aligned_cols=200 Identities=11% Similarity=0.128 Sum_probs=130.4
Q ss_pred eEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEe
Q 010748 271 GLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA 350 (502)
Q Consensus 271 ~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 350 (502)
+.-.||. .++||.=. ..++.|+|+++...+..+.. ...|.--.|-... .|+-.+ +..|+-|++.....+...+.
T Consensus 70 sAIMnP~-~~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis~~--~l~lVT-~taVyHWsi~~~s~P~kvFd 143 (494)
T 1bpo_A 70 SAIMNPA-SKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN--TVALVT-DNAVYHWSMEGESQPVKMFD 143 (494)
T ss_dssp EEEECSS-SSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEETT--EEEEEC-SSEEEEEESSSSCCCEEEEE
T ss_pred eeeeCCC-CcEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecCCC--eEEEEc-CCeeEEecccCCCCchhhee
Confidence 3446777 55666654 68999999999988888874 4567777786654 344333 57899999976444433332
Q ss_pred -e----cCCeeEEEeCCCCCCEEEEEe------CCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCC--CC
Q 010748 351 -V----AADVESLAWDPHAEHSFVVSL------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPL--VP 417 (502)
Q Consensus 351 -~----~~~v~~v~~~~~~~~~~~~~~------~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~--~~ 417 (502)
| ...|.....+++...++++|- -.|.+.+|.+.. .....+.+|...-..+.+..+ ..
T Consensus 144 R~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er----------~~sQ~ieGhaa~F~~~~~~g~~~~~ 213 (494)
T 1bpo_A 144 RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR----------KVSQPIEGHAASFAQFKMEGNAEES 213 (494)
T ss_dssp CCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT----------CCEEEECCSEEEEEEEECTTCSSEE
T ss_pred cchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc----------cccchheeeeeeeEEEecCCCCCCc
Confidence 2 345777788888877777663 347789999885 345667777655544443321 11
Q ss_pred CEEEEEeCC---CcEEEEECCCC---Ce---eEEEE--e--cCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcc
Q 010748 418 NLLATGSTD---KMVKLWDLSNN---QP---SCIAS--R--NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 484 (502)
Q Consensus 418 ~~l~t~s~d---g~i~vwd~~~~---~~---~~~~~--~--~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~ 484 (502)
.+++.+... +.++|.++... .+ ..... + ........++..++... ++..-+.-|.|++||+.++.+
T Consensus 214 ~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kyg-viyviTK~G~i~lyDleTgt~ 292 (494)
T 1bpo_A 214 TLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGTC 292 (494)
T ss_dssp EEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTTCCE
T ss_pred eEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCC-EEEEEecCceEEEEeccccee
Confidence 344444443 67999988543 11 01111 1 12234566888888877 577788999999999999998
Q ss_pred ccc
Q 010748 485 ISN 487 (502)
Q Consensus 485 ~~~ 487 (502)
+..
T Consensus 293 i~~ 295 (494)
T 1bpo_A 293 IYM 295 (494)
T ss_dssp EEE
T ss_pred eee
Confidence 743
No 302
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.49 E-value=0.026 Score=53.00 Aligned_cols=146 Identities=10% Similarity=0.128 Sum_probs=90.6
Q ss_pred CCcEEEEeC--CCCeeeEeecc------CC-CCeEEEEE--cCCCC-cEEEEEeCCCcEEEEecCCC---CC---ccceE
Q 010748 288 DKQVKIWDV--AAGKCNLTLEH------HT-DKVQAVAW--NHHSP-QILLSGSFDRSVVMKDARIS---TH---SGFKW 349 (502)
Q Consensus 288 dg~v~vwd~--~~~~~~~~~~~------h~-~~v~~l~~--~~~~~-~~l~s~s~dg~i~iwd~~~~---~~---~~~~~ 349 (502)
+++|.+|++ .++. +..+.. .. ..+..+++ +|... .++++...+|.+..|++... .. ....+
T Consensus 98 ~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 98 KNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp CCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe
Confidence 578999976 3333 444421 11 45666777 77543 46888888999999998432 11 12345
Q ss_pred eecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEe-cc-CCCeeEEEE--cCCCCCEEEEEe-
Q 010748 350 AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH-AH-DKAVCTISY--NPLVPNLLATGS- 424 (502)
Q Consensus 350 ~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~-~h-~~~v~~l~~--sp~~~~~l~t~s- 424 (502)
...+.+..+...+... .++++-++..|..|+........ ...+..+. ++ ...+..|++ .+++..+|++++
T Consensus 177 ~lgsq~EgcvvDd~~g-~Lyv~eEd~GIw~~da~p~~~~~----~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQ 251 (355)
T 3amr_A 177 KMNSQTEGMAADDEYG-RLYIAEEDEAIWKFSAEPDGGSN----GTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQ 251 (355)
T ss_dssp ECSSCEEEEEEETTTT-EEEEEETTTEEEEEECSTTSCSC----CEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEG
T ss_pred cCCCCcceEEEcCCCC-eEEEecccceEEEEeCCcCCCCC----ceEEEEecCCccccCcceEEEEecCCCCEEEEEEcC
Confidence 6678899999998654 78899888777777755321000 12333321 22 246788887 444433555555
Q ss_pred CCCcEEEEECC-CCCe
Q 010748 425 TDKMVKLWDLS-NNQP 439 (502)
Q Consensus 425 ~dg~i~vwd~~-~~~~ 439 (502)
.++++.+||.. +.+.
T Consensus 252 G~~s~~Vydr~~~~~~ 267 (355)
T 3amr_A 252 GNSSYAIYDRQGKNKY 267 (355)
T ss_dssp GGTEEEEEESSTTCCE
T ss_pred CCCEEEEEECCCCCcE
Confidence 57799999997 4553
No 303
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.36 E-value=0.09 Score=48.58 Aligned_cols=245 Identities=13% Similarity=0.174 Sum_probs=144.7
Q ss_pred CCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEE
Q 010748 206 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASA 285 (502)
Q Consensus 206 s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sg 285 (502)
+|..+.||.=. ...++|+|+++...+.. +. ....|.-=.|-.. +.|+-.
T Consensus 75 nP~~~ViALra-g~~LQiFnletK~klks-------------------------~~---~~e~VvfWkWis~--~~L~lV 123 (365)
T 2xzh_A 75 NPASKVIALKA-GKTLQIFNIEMKSKMKA-------------------------HT---MTDDVTFWKWISL--NTVALV 123 (365)
T ss_dssp CSSSSEEEEEE-TTEEEEEETTTTEEEEE-------------------------EE---CSSCEEEEEECSS--SEEEEE
T ss_pred CCCccEEEEec-CCeEEEechHHhhhhcc-------------------------ee---cCCccEEEEecCC--CeEEEE
Confidence 68888888765 68899999985222111 11 2356777778665 355555
Q ss_pred ecCCcEEEEeCCC-CeeeEeeccC----CCCeEEEEEcCCCCcEEEEEe------CCCcEEEEecCCCCCccceEeecCC
Q 010748 286 SADKQVKIWDVAA-GKCNLTLEHH----TDKVQAVAWNHHSPQILLSGS------FDRSVVMKDARISTHSGFKWAVAAD 354 (502)
Q Consensus 286 s~dg~v~vwd~~~-~~~~~~~~~h----~~~v~~l~~~~~~~~~l~s~s------~dg~i~iwd~~~~~~~~~~~~~~~~ 354 (502)
+. ..|.-|++.. ..+++.|..| ...|..-..+++..-++++|- -.|.+.+|......... ..+|.+.
T Consensus 124 T~-taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~-ieGhaa~ 201 (365)
T 2xzh_A 124 TD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP-IEGHAAS 201 (365)
T ss_dssp ES-SEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEE-ECCSEEE
T ss_pred cC-CcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccce-eeeeeee
Confidence 54 5799999974 3555656444 356777777888744444443 23678888887543222 2233322
Q ss_pred eeEEEeC--CCCCCEEEEEeC---CCcEEEEECCCCCCCCCCCCCccceEE-e---ccCCCeeEEEEcCCCCCEEEEEeC
Q 010748 355 VESLAWD--PHAEHSFVVSLE---DGTIKGFDIRTAKSDPDSTSQQSSFTL-H---AHDKAVCTISYNPLVPNLLATGST 425 (502)
Q Consensus 355 v~~v~~~--~~~~~~~~~~~~---dg~v~i~d~~~~~~~~~~~~~~~~~~~-~---~h~~~v~~l~~sp~~~~~l~t~s~ 425 (502)
...+... +....+|+.+.. .+.+++.++....... ....+....+ . +...--.++..++.. .+++.-+.
T Consensus 202 F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~-~~f~kk~vdi~fppea~~DFPVamqvs~ky-gviyviTK 279 (365)
T 2xzh_A 202 FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN-QPFPKKAVDVFFPPEAQNDFPVAMQISEKH-DVVFLITK 279 (365)
T ss_dssp EEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTC-CCCCCEEEEECCCTTCTTCCEEEEEEETTT-TEEEEEET
T ss_pred eEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCC-CCcccccceeeCCccccCCceEEEEecccC-CEEEEEeC
Confidence 2222221 111223333322 2589999985431100 0001111111 1 123445677888876 78888999
Q ss_pred CCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010748 426 DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 426 dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~~ 488 (502)
-|.|++||+.++. +++.-.-...+|+..+-+..... +++-...|.|.--.+.....+..+
T Consensus 280 ~G~ihlyDleTgt--~i~~nrIS~d~iF~ta~~~~~~G-i~~Vnr~GqVl~v~v~~~~ivpyi 339 (365)
T 2xzh_A 280 YGYIHLYDLETGT--CIYMNRISGETIFVTAPHEATAG-IIGVNRKGQVLSVCVEEENIIPYI 339 (365)
T ss_dssp TSEEEEEETTTCC--EEEEEECCSSCEEEEEEEGGGTE-EEEEETTCEEEEEEECTTTHHHHH
T ss_pred CcEEEEEEcccCc--EEEEeccCCCceEEecccCCCCc-EEEEcCCCEEEEEEECcccEehhh
Confidence 9999999999998 55555555677877666555444 555678898888877776665433
No 304
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.33 E-value=0.12 Score=49.19 Aligned_cols=243 Identities=11% Similarity=0.097 Sum_probs=121.3
Q ss_pred cceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeE
Q 010748 193 PLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL 272 (502)
Q Consensus 193 ~~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 272 (502)
|..++| .|+|++|.++...|.|++++.+.. ...+.. ...............|
T Consensus 20 P~~i~~-------~pdG~~l~V~e~~G~i~~~~~~g~-~~~~~~--------------------~~~~v~~~g~~g~~gi 71 (353)
T 2g8s_A 20 PWALAF-------LPDNHGMLITLRGGELRHWQAGKG-LSAPLS--------------------GVPDVWAHGQGGLLDV 71 (353)
T ss_dssp EEEEEE-------CSTTCCEEEEETTTEEEEEETTTE-ECCCCB--------------------SCCCCCCSTTCSEEEE
T ss_pred cEEEEE-------cCCCCEEEEEeCCceEEEEeCCCc-eeeEec--------------------CCcccccCCCCCceeE
Confidence 456666 688983445556799999875321 000000 0000111223457899
Q ss_pred EeccC---CCcEEEEEec-------CCcEEEEeCCCC-------eee-Eeecc---CCCCeEEEEEcCCCCcEEEEEeC-
Q 010748 273 AWNKE---FRNILASASA-------DKQVKIWDVAAG-------KCN-LTLEH---HTDKVQAVAWNHHSPQILLSGSF- 330 (502)
Q Consensus 273 ~~~~~---~~~~l~sgs~-------dg~v~vwd~~~~-------~~~-~~~~~---h~~~v~~l~~~~~~~~~l~s~s~- 330 (502)
+|+|+ ++.+.++-+. ...|..|++... +.+ ..+.. .......|.|.|++ .++++.+.
T Consensus 72 a~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~Gd~ 150 (353)
T 2g8s_A 72 VLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKG-YLFIALGEN 150 (353)
T ss_dssp EECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSS-EEEEEECCT
T ss_pred EECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCC-cEEEEECCC
Confidence 99995 3544444333 235666666432 111 11110 11123579999999 55555433
Q ss_pred ------------CCcEEEEecCCCCC-----------ccceEeec-CCeeEEEeCCCCCCEEEEEe-CCCcEEEEECCCC
Q 010748 331 ------------DRSVVMKDARISTH-----------SGFKWAVA-ADVESLAWDPHAEHSFVVSL-EDGTIKGFDIRTA 385 (502)
Q Consensus 331 ------------dg~i~iwd~~~~~~-----------~~~~~~~~-~~v~~v~~~~~~~~~~~~~~-~dg~v~i~d~~~~ 385 (502)
.|.|.-++....-. ....+... .....++|+|....++++-. .++.=.+.-+..+
T Consensus 151 ~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G 230 (353)
T 2g8s_A 151 NQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKG 230 (353)
T ss_dssp TCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTT
T ss_pred CCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccC
Confidence 24566666543210 11123222 33778999994343333322 1111122222221
Q ss_pred CCC----------------------CCCCCCccceEEeccCCCeeEEEEcC-------CCCCEEEEEeCCCcEEEEECCC
Q 010748 386 KSD----------------------PDSTSQQSSFTLHAHDKAVCTISYNP-------LVPNLLATGSTDKMVKLWDLSN 436 (502)
Q Consensus 386 ~~~----------------------~~~~~~~~~~~~~~h~~~v~~l~~sp-------~~~~~l~t~s~dg~i~vwd~~~ 436 (502)
... .......++..+..| ...+.+.|.. ++ .++++....+.|...++..
T Consensus 231 ~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g-~l~v~~~~~~~v~~~~~~~ 308 (353)
T 2g8s_A 231 KNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDS-PAVSGMAFYNSDKFPQWQQ-KLFIGALKDKDVIVMSVNG 308 (353)
T ss_dssp CBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSC-CCEEEEEEECCSSSGGGTT-EEEEEETTTTEEEEEEEET
T ss_pred CcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCC-cCcceeEEECCccCcccCC-cEEEEEccCCEEEEEEeCC
Confidence 100 000012334444433 4567788864 23 6777666778888888776
Q ss_pred CCeeEEEEe-cCCCCcEEEEEEcCCCCcEEEE
Q 010748 437 NQPSCIASR-NPKAGAVFSVAFSEDSPFVLAI 467 (502)
Q Consensus 437 ~~~~~~~~~-~~~~~~v~~~~~spd~~~ll~s 467 (502)
++......+ ......+..+++.|+|. |+++
T Consensus 309 ~~~~~~~~~~~~~~~rp~~v~~~pdG~-lyv~ 339 (353)
T 2g8s_A 309 DKVTEDGRILTDRGQRIRDVRTGPDGY-LYVL 339 (353)
T ss_dssp TEEEEEEEESGGGCCCEEEEEECTTSC-EEEE
T ss_pred CeEeeeEEcccCCCCceeEEEECCCCc-EEEE
Confidence 543222222 12235799999999998 4553
No 305
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.30 E-value=0.014 Score=54.23 Aligned_cols=185 Identities=16% Similarity=0.189 Sum_probs=94.1
Q ss_pred CcEEEEEecC-----CcEEEEeCCCCe---e--eEeeccCCCCeEEEEEcCCCCcEEEEEeCC-----CcEEEEecCCCC
Q 010748 279 RNILASASAD-----KQVKIWDVAAGK---C--NLTLEHHTDKVQAVAWNHHSPQILLSGSFD-----RSVVMKDARIST 343 (502)
Q Consensus 279 ~~~l~sgs~d-----g~v~vwd~~~~~---~--~~~~~~h~~~v~~l~~~~~~~~~l~s~s~d-----g~i~iwd~~~~~ 343 (502)
+.+++.|+.+ ..+.+||+.+.+ - +..+........++.+ ++ .+++.|+.+ ..+.+||+.+.+
T Consensus 63 ~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~-~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 63 DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GD-MIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CC-EEEEEcccCCCcccceEEEEcCCCCe
Confidence 4577777754 468999988765 2 2222211122222223 34 677777654 357888887654
Q ss_pred CccceEeec---CCeeEEEeCCCCCCEEEEEeCC-----CcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCC
Q 010748 344 HSGFKWAVA---ADVESLAWDPHAEHSFVVSLED-----GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPL 415 (502)
Q Consensus 344 ~~~~~~~~~---~~v~~v~~~~~~~~~~~~~~~d-----g~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~ 415 (502)
-... .... ....++.+ +..+++.|+.+ ..+.+||+.+.. ...+..+.........+.+ +
T Consensus 140 W~~~-~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~d~~~~~-------W~~~~~~p~~r~~~~~~~~--~ 206 (301)
T 2vpj_A 140 WSML-GDMQTAREGAGLVVA---SGVIYCLGGYDGLNILNSVEKYDPHTGH-------WTNVTPMATKRSGAGVALL--N 206 (301)
T ss_dssp EEEE-EECSSCCBSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTTTE-------EEEECCCSSCCBSCEEEEE--T
T ss_pred EEEC-CCCCCCcccceEEEE---CCEEEEECCCCCCcccceEEEEeCCCCc-------EEeCCCCCcccccceEEEE--C
Confidence 2211 1111 11222223 23466666544 458889987641 1111111111111222222 2
Q ss_pred CCCEEEEEeCC-----CcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCC-----CcEEEEECCCCc
Q 010748 416 VPNLLATGSTD-----KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSK-----GKLEIWDTLSDA 483 (502)
Q Consensus 416 ~~~~l~t~s~d-----g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~d-----g~i~vwd~~~~~ 483 (502)
+ .+++.|+.+ ..+.+||+.+.+...+...........++.+ ++. +++.||.+ ..|.+||+.+.+
T Consensus 207 ~-~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 207 D-HIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGR-LYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp T-EEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE-EEEECCBCSSSBEEEEEEEETTTTE
T ss_pred C-EEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCE-EEEEcCcCCCcccccEEEEcCCCCe
Confidence 3 677777764 4689999998875444333222222222333 454 67778765 357889987653
No 306
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.28 E-value=0.013 Score=54.45 Aligned_cols=163 Identities=10% Similarity=0.100 Sum_probs=103.7
Q ss_pred cCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEee-------cCCeeEEEe---CCCCCCEEEEEe----
Q 010748 307 HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV-------AADVESLAW---DPHAEHSFVVSL---- 372 (502)
Q Consensus 307 ~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-------~~~v~~v~~---~~~~~~~~~~~~---- 372 (502)
.......+++|++....++++.-..++|..|+...+......... ...+..+.| .|.+ .++++..
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~g-rL~vv~~~~~a 88 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSK-RLFAVMKNAKS 88 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCC-EEEEEEEETTT
T ss_pred CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCC-cEEEEEccccc
Confidence 334455688999877455555558999999998754332221111 113578899 6763 3555433
Q ss_pred ---------CCCcEEEEECC---CCCCCCCCCCCccceEEe--cc-----------CCCeeEEEEcCCCCCEEEEEeCC-
Q 010748 373 ---------EDGTIKGFDIR---TAKSDPDSTSQQSSFTLH--AH-----------DKAVCTISYNPLVPNLLATGSTD- 426 (502)
Q Consensus 373 ---------~dg~v~i~d~~---~~~~~~~~~~~~~~~~~~--~h-----------~~~v~~l~~sp~~~~~l~t~s~d- 426 (502)
.+..|..||+. ++ +.++... .. ......++..++| +..++++.-
T Consensus 89 f~~~g~~~~g~~~v~~~Dl~~~~tg---------~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~G-naYVt~s~~~ 158 (334)
T 2p9w_A 89 FNFADQSSHGASSFHSFNLPLSENS---------KPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDG-NSYVAFALGM 158 (334)
T ss_dssp TCTTSCCSSSCCEEEEEESSCCTTC---------CCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTS-CEEEEEEESS
T ss_pred ccccccccCCCCEEEEEcCCcCCCC---------CEEEEecCccccccccccccccccCCceeEECCCC-CEEEeCCCCC
Confidence 25779999998 55 3444332 11 1247899999998 888888887
Q ss_pred CcEEEEECCCCCeeEEEEec---CCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010748 427 KMVKLWDLSNNQPSCIASRN---PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 427 g~i~vwd~~~~~~~~~~~~~---~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~ 481 (502)
+.|..++............. ......+.|+++|++.. |++....|.|..+|+.+
T Consensus 159 ~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~-Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 159 PAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNK-LIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTE-EEEESSSSSEEEEECSS
T ss_pred CeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCE-EEEEcCCCeEEEEcCCC
Confidence 88888777655322111111 11223668999999985 55555599999999874
No 307
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.26 E-value=0.025 Score=52.38 Aligned_cols=147 Identities=16% Similarity=0.164 Sum_probs=73.5
Q ss_pred CcEEEEEecC-----CcEEEEeCCCCeee--EeeccCCCCeEEEEEcCCCCcEEEEEeCC-----CcEEEEecCCCCCcc
Q 010748 279 RNILASASAD-----KQVKIWDVAAGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGSFD-----RSVVMKDARISTHSG 346 (502)
Q Consensus 279 ~~~l~sgs~d-----g~v~vwd~~~~~~~--~~~~~h~~~v~~l~~~~~~~~~l~s~s~d-----g~i~iwd~~~~~~~~ 346 (502)
+.+++.|+.+ ..+.+||+.+.+-. ..+........++.+ ++ .+++.|+.+ ..+.+||+.+..-..
T Consensus 113 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 189 (301)
T 2vpj_A 113 DMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SG-VIYCLGGYDGLNILNSVEKYDPHTGHWTN 189 (301)
T ss_dssp TEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CC-EEEEECCCCCCcccceEEEEeCCCCcEEe
Confidence 4577777654 35889998876532 222211112222222 34 677777654 458888887643211
Q ss_pred ce-Ee-ecCCeeEEEeCCCCCCEEEEEeCC-----CcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCE
Q 010748 347 FK-WA-VAADVESLAWDPHAEHSFVVSLED-----GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNL 419 (502)
Q Consensus 347 ~~-~~-~~~~v~~v~~~~~~~~~~~~~~~d-----g~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~ 419 (502)
.. .. ......++.+ +..+++.|+.+ ..+.+||+.+.. ...+..+.........+.+ ++ .+
T Consensus 190 ~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~~-------W~~~~~~p~~r~~~~~~~~--~~-~i 256 (301)
T 2vpj_A 190 VTPMATKRSGAGVALL---NDHIYVVGGFDGTAHLSSVEAYNIRTDS-------WTTVTSMTTPRCYVGATVL--RG-RL 256 (301)
T ss_dssp ECCCSSCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTTE-------EEEECCCSSCCBSCEEEEE--TT-EE
T ss_pred CCCCCcccccceEEEE---CCEEEEEeCCCCCcccceEEEEeCCCCc-------EEECCCCCCcccceeEEEE--CC-EE
Confidence 10 00 0111222333 23467777653 468899987652 1111111111111222222 33 67
Q ss_pred EEEEeCC-----CcEEEEECCCCCeeE
Q 010748 420 LATGSTD-----KMVKLWDLSNNQPSC 441 (502)
Q Consensus 420 l~t~s~d-----g~i~vwd~~~~~~~~ 441 (502)
++.|+.+ ..|.+||+.+.+...
T Consensus 257 ~v~GG~~~~~~~~~v~~yd~~~~~W~~ 283 (301)
T 2vpj_A 257 YAIAGYDGNSLLSSIECYDPIIDSWEV 283 (301)
T ss_dssp EEECCBCSSSBEEEEEEEETTTTEEEE
T ss_pred EEEcCcCCCcccccEEEEcCCCCeEEE
Confidence 7777765 357888988776433
No 308
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.23 E-value=0.16 Score=48.80 Aligned_cols=244 Identities=13% Similarity=0.175 Sum_probs=146.5
Q ss_pred CCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEE
Q 010748 206 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASA 285 (502)
Q Consensus 206 s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sg 285 (502)
+|..+.||.=. ..++.|||+++...+.. +. ....|.-=.|-.. +.|+-.
T Consensus 74 nP~~~iiALra-g~~lQiFnle~K~klks-------------------------~~---~~e~VvfWkWis~--~~l~lV 122 (494)
T 1bpo_A 74 NPASKVIALKA-GKTLQIFNIEMKSKMKA-------------------------HT---MTDDVTFWKWISL--NTVALV 122 (494)
T ss_dssp CSSSSCEEEEE-TTEEEEEETTTTEEEEE-------------------------EE---CSSCCCEEEEEET--TEEEEE
T ss_pred CCCCcEEEEec-CCeEEEEchHHhhhhcc-------------------------ee---cCCCceEEEecCC--CeEEEE
Confidence 67788888765 68999999985222111 11 2345777777655 356555
Q ss_pred ecCCcEEEEeCCC-CeeeEeeccC----CCCeEEEEEcCCCCcEEEEEe------CCCcEEEEecCCCCCccceEeecCC
Q 010748 286 SADKQVKIWDVAA-GKCNLTLEHH----TDKVQAVAWNHHSPQILLSGS------FDRSVVMKDARISTHSGFKWAVAAD 354 (502)
Q Consensus 286 s~dg~v~vwd~~~-~~~~~~~~~h----~~~v~~l~~~~~~~~~l~s~s------~dg~i~iwd~~~~~~~~~~~~~~~~ 354 (502)
+. ..|+-|++.. ..+++.|..| ...|..-..+++..-++++|- -.|.+.+|......... ..+|.+.
T Consensus 123 T~-taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~-ieGhaa~ 200 (494)
T 1bpo_A 123 TD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP-IEGHAAS 200 (494)
T ss_dssp CS-SEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEE-ECCSEEE
T ss_pred cC-CeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccch-heeeeee
Confidence 54 5799999964 3456666444 356777777888844444442 24778899887654322 3334333
Q ss_pred eeEEEeCC--CCCCEEEEEeC---CCcEEEEECCCCCCCCCCCCCccceEEe----ccCCCeeEEEEcCCCCCEEEEEeC
Q 010748 355 VESLAWDP--HAEHSFVVSLE---DGTIKGFDIRTAKSDPDSTSQQSSFTLH----AHDKAVCTISYNPLVPNLLATGST 425 (502)
Q Consensus 355 v~~v~~~~--~~~~~~~~~~~---dg~v~i~d~~~~~~~~~~~~~~~~~~~~----~h~~~v~~l~~sp~~~~~l~t~s~ 425 (502)
...+.... ....+|+.+.. .+.+++.++....... ....+....+. ....--.++..++.. .+++.-+.
T Consensus 201 F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~-~~f~kk~vdv~fppe~~~DFPvamqvs~ky-gviyviTK 278 (494)
T 1bpo_A 201 FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN-QPFPKKAVDVFFPPEAQNDFPVAMQISEKH-DVVFLITK 278 (494)
T ss_dssp EEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTC-CCCCCEEEECCCCTTSTTCCEEEEEEETTT-TEEEEEET
T ss_pred eEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCC-CCccceeeeeeCCcccccCceeEEEecccC-CEEEEEec
Confidence 33333321 11223333333 2789999986541100 00011111111 123445678888876 78889999
Q ss_pred CCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccc
Q 010748 426 DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 487 (502)
Q Consensus 426 dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~~ 487 (502)
-|.|++||+.++. +++.-.-...+|+..+-...... +++....|.|.--.+.....+..
T Consensus 279 ~G~i~lyDleTgt--~i~~nrIs~~~iF~t~~~~~~~G-i~~Vnr~GqVl~v~v~e~~ivpy 337 (494)
T 1bpo_A 279 YGYIHLYDLETGT--CIYMNRISGETIFVTAPHEATAG-IIGVNRKGQVLSVCVEEENIIPY 337 (494)
T ss_dssp TSEEEEEETTTCC--EEEEEECCSSCEEEEEEETTTTE-EEEEETTCEEEEEEECTTTHHHH
T ss_pred CceEEEEecccce--eeeeecccCCceEEecccCCCCc-EEEEccCceEEEEEEccccchhh
Confidence 9999999999998 45555555677877777666554 55567889888877776665543
No 309
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.19 E-value=0.035 Score=51.53 Aligned_cols=186 Identities=15% Similarity=0.117 Sum_probs=94.4
Q ss_pred CcEEEEEecC----CcEEEEeCCCCeeeE--eeccCCCCeEEEEEcCCCCcEEEEEeCC------CcEEEEecCCCCCcc
Q 010748 279 RNILASASAD----KQVKIWDVAAGKCNL--TLEHHTDKVQAVAWNHHSPQILLSGSFD------RSVVMKDARISTHSG 346 (502)
Q Consensus 279 ~~~l~sgs~d----g~v~vwd~~~~~~~~--~~~~h~~~v~~l~~~~~~~~~l~s~s~d------g~i~iwd~~~~~~~~ 346 (502)
+.+++.|+.+ ..+.+||+.+.+-.. .+........++.+ ++ .+++.|+.+ ..+.+||+.+..-..
T Consensus 56 ~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 56 NVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EG-KIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TT-EEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CC-EEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 4577777754 678899998875322 22211112222222 34 677777765 458888887653111
Q ss_pred c--eEeecCCeeEEEeCCCCCCEEEEEeC---------CCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCC
Q 010748 347 F--KWAVAADVESLAWDPHAEHSFVVSLE---------DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPL 415 (502)
Q Consensus 347 ~--~~~~~~~v~~v~~~~~~~~~~~~~~~---------dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~ 415 (502)
. .........++.+ +..+++.|+. -..+.+||+.+.. ...+..+......-..+.+ +
T Consensus 133 ~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~-------W~~~~~~p~~r~~~~~~~~--~ 200 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEA---NGLIYVCGGSLGNNVSGRVLNSCEVYDPATET-------WTELCPMIEARKNHGLVFV--K 200 (306)
T ss_dssp ECCCSSCCBSCEEEEE---TTEEEEECCEESCTTTCEECCCEEEEETTTTE-------EEEECCCSSCCBSCEEEEE--T
T ss_pred CCCCcCCcceeEEEEE---CCEEEEECCCCCCCCcccccceEEEeCCCCCe-------EEECCCccchhhcceEEEE--C
Confidence 0 0000111122222 2345666543 3458889987651 1111111111111122222 2
Q ss_pred CCCEEEEEeCC-----CcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCC-----CcEEEEECCCCc
Q 010748 416 VPNLLATGSTD-----KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSK-----GKLEIWDTLSDA 483 (502)
Q Consensus 416 ~~~~l~t~s~d-----g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~d-----g~i~vwd~~~~~ 483 (502)
+ .+++.|+.+ ..+.+||+.+.+...+...........++.+ ++. +++.||.+ ..+.+||+.+.+
T Consensus 201 ~-~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 201 D-KIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSI-VYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp T-EEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTE-EEEEECBCSSSBCCEEEEEETTTTE
T ss_pred C-EEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCE-EEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 3 677776653 3588999988765443333222222233333 444 78888854 468999987754
No 310
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.18 E-value=0.43 Score=52.83 Aligned_cols=191 Identities=16% Similarity=0.141 Sum_probs=94.0
Q ss_pred ccccCCCcceeeeecCCCCCCCCCCEEEEecC-CCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccC
Q 010748 186 HIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM-EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGS 264 (502)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~s~~~~~la~g~~-dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (502)
...++.-+.|+...+.. .....++++|+|.. |++|+|++++..+.+.... ++. ..
T Consensus 549 ~~~l~~evscl~i~~~~-~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~-L~~----------------------~~ 604 (1158)
T 3ei3_A 549 HTEMEHEVACLDITPLG-DSNGLSPLCAIGLWTDISARILKLPSFELLHKEM-LGG----------------------EI 604 (1158)
T ss_dssp EEECSSCEEEEECCCCS-SSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEE-CCS----------------------SC
T ss_pred ccCCCCceEEEEeecCC-CCcccccEEEEEECCCCEEEEEECCCCCeEEEEE-CCC----------------------CC
Confidence 34456666777653221 11224689999996 9999999997533221100 100 00
Q ss_pred cccceeeEEeccCCCcEEEEEecCCcEEEEeC--CCCeeeE---eeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEec
Q 010748 265 HTDSVLGLAWNKEFRNILASASADKQVKIWDV--AAGKCNL---TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDA 339 (502)
Q Consensus 265 h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~--~~~~~~~---~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~ 339 (502)
-...|.-+.+ .+..+|..|-.||.+.-+.+ .+|.... .+-+ +.++.-..+...+...+++.| ++...+|--
T Consensus 605 ~p~si~l~~~--~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s-~rp~liy~~ 680 (1158)
T 3ei3_A 605 IPRSILMTTF--ESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACS-DRPTVIYSS 680 (1158)
T ss_dssp CEEEEEEEEE--TTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEES-SSCEEEEES
T ss_pred CCcEEEEEEe--CCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEEC-CCCEEEEEc
Confidence 1122333333 23468889999998865554 4454322 1222 345554445444433333333 454445443
Q ss_pred CCCCCccceEeec-CCee-EEEeCCCC-CCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCC
Q 010748 340 RISTHSGFKWAVA-ADVE-SLAWDPHA-EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLV 416 (502)
Q Consensus 340 ~~~~~~~~~~~~~-~~v~-~v~~~~~~-~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~ 416 (502)
+. + .. ..... ..+. ...|+... +.-++..+ ++.++|..+.... ...+.++.- ...+..++++|..
T Consensus 681 ~~-~-l~-~s~l~~~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~-------~~~~~~ipL-~~Tprri~y~~~~ 748 (1158)
T 3ei3_A 681 NH-K-LV-FSNVNLKEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQ-------KLHIRTVPL-YESPRKICYQEVS 748 (1158)
T ss_dssp SS-S-EE-EEEBSSSCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSS-------SEEEEEEEC-SSEEEEEEEEGGG
T ss_pred CC-c-eE-EeccChHHhceEeccCcccCCCcEEEEc-CCceEEEEecccC-------CeeEEEEeC-CCCceEEEEcCCC
Confidence 32 1 11 11111 1232 33454322 23344444 4569998876541 122333332 3456777888765
No 311
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.17 E-value=0.16 Score=47.64 Aligned_cols=151 Identities=9% Similarity=0.003 Sum_probs=83.6
Q ss_pred cccceeeEEeccCCCcEEEEEecCCcEEEEeC--CCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCC
Q 010748 265 HTDSVLGLAWNKEFRNILASASADKQVKIWDV--AAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS 342 (502)
Q Consensus 265 h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~--~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~ 342 (502)
+...+..+.+.++ +.+++.+...+..+-+|- .+.+.+. ......+..+.+.+++ .+ +.++.+|.+++.....+
T Consensus 161 ~~~~~~~~~~~~~-~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g-~~-~~~~~~G~~~~s~~D~G 235 (327)
T 2xbg_A 161 AIGVMRNLNRSPS-GEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDG-RL-WMIVNGGKIAFSDPDNS 235 (327)
T ss_dssp CCCCEEEEEECTT-SCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTS-CE-EEEETTTEEEEEETTEE
T ss_pred CCcceEEEEEcCC-CcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCC-CE-EEEeCCceEEEecCCCC
Confidence 3456888999987 446665544333333442 2333332 2345678899998887 54 45566788777632111
Q ss_pred C---Cccce-EeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEec---cCCCeeEEEEcCC
Q 010748 343 T---HSGFK-WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA---HDKAVCTISYNPL 415 (502)
Q Consensus 343 ~---~~~~~-~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~---h~~~v~~l~~sp~ 415 (502)
. ..... ......+.++.+.+.+. +++++.+|.| ++....+ .....+.. +...+.++.|.+.
T Consensus 236 ~tW~~~~~~~~~~~~~~~~v~~~~~~~--~~~~g~~g~i-~~S~DgG---------~tW~~~~~~~~~~~~~~~v~~~~~ 303 (327)
T 2xbg_A 236 ENWGELLSPLRRNSVGFLDLAYRTPNE--VWLAGGAGAL-LCSQDGG---------QTWQQDVDVKKVPSNFYKILFFSP 303 (327)
T ss_dssp EEECCCBCTTSSCCSCEEEEEESSSSC--EEEEESTTCE-EEESSTT---------SSCEECGGGTTSSSCCCEEEEEET
T ss_pred CeeEeccCCcccCCcceEEEEecCCCE--EEEEeCCCeE-EEeCCCC---------cccEEcCccCCCCCCeEEEEEECC
Confidence 1 11000 01123578888987543 4444557766 3343333 22222221 2456788888753
Q ss_pred CCCEEEEEeCCCcEEEEEC
Q 010748 416 VPNLLATGSTDKMVKLWDL 434 (502)
Q Consensus 416 ~~~~l~t~s~dg~i~vwd~ 434 (502)
..+++++.+|.|.-++-
T Consensus 304 --~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 304 --DQGFILGQKGILLRYVT 320 (327)
T ss_dssp --TEEEEECSTTEEEEECC
T ss_pred --CceEEEcCCceEEEEcC
Confidence 45777778898776654
No 312
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.12 E-value=0.024 Score=52.61 Aligned_cols=186 Identities=16% Similarity=0.158 Sum_probs=92.9
Q ss_pred CcEEEEEecC-----CcEEEEeCCCCeeeE--eeccCCCCeEEEEEcCCCCcEEEEEeCCC-----cEEEEecCCCCCcc
Q 010748 279 RNILASASAD-----KQVKIWDVAAGKCNL--TLEHHTDKVQAVAWNHHSPQILLSGSFDR-----SVVMKDARISTHSG 346 (502)
Q Consensus 279 ~~~l~sgs~d-----g~v~vwd~~~~~~~~--~~~~h~~~v~~l~~~~~~~~~l~s~s~dg-----~i~iwd~~~~~~~~ 346 (502)
+.+++.|+.+ ..+.+||+.+.+-.. .+........++.+ ++ .+++.|+.++ .+.+||+.+.+-..
T Consensus 62 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 62 GLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NG-LLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT-EEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CC-EEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 4577777754 358899988765322 22211112222222 34 6777777654 46778876543111
Q ss_pred ce--EeecCCeeEEEeCCCCCCEEEEEeC-------CCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCC
Q 010748 347 FK--WAVAADVESLAWDPHAEHSFVVSLE-------DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP 417 (502)
Q Consensus 347 ~~--~~~~~~v~~v~~~~~~~~~~~~~~~-------dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~ 417 (502)
.. ........++.+ +..+++.|+. -..+.+||+.+.. ...+..+.........+.+ ++
T Consensus 139 ~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~-------W~~~~~~p~~r~~~~~~~~--~~- 205 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGVV---GGLLYAVGGYDVASRQCLSTVECYNATTNE-------WTYIAEMSTRRSGAGVGVL--NN- 205 (302)
T ss_dssp ECCCSSCCBSCEEEEE---TTEEEEECCEETTTTEECCCEEEEETTTTE-------EEEECCCSSCCBSCEEEEE--TT-
T ss_pred cCCCCCcccCceEEEE---CCEEEEEeCCCCCCCccccEEEEEeCCCCc-------EEECCCCccccccccEEEE--CC-
Confidence 00 000111122223 2346666653 2358889987641 1111111111111222222 23
Q ss_pred CEEEEEeCC-----CcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCC-----cEEEEECCCCc
Q 010748 418 NLLATGSTD-----KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKG-----KLEIWDTLSDA 483 (502)
Q Consensus 418 ~~l~t~s~d-----g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg-----~i~vwd~~~~~ 483 (502)
.+++.|+.+ ..+.+||+.+.+...+............+.+ ++. +++.||.++ .+.+||+.++.
T Consensus 206 ~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 206 LLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV--NGL-LYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp EEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE-EEEECCBCSSSBCCCEEEEETTTTE
T ss_pred EEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE--CCE-EEEECCcCCCcccccEEEEcCCCCe
Confidence 677777754 3689999988765444333222111122222 444 678887654 48999997754
No 313
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.09 E-value=0.018 Score=53.71 Aligned_cols=186 Identities=11% Similarity=0.120 Sum_probs=92.6
Q ss_pred CcEEEEEec----C-----CcEEEEeCCCCeeeE--eeccCCCCeEEEEEcCCCCcEEEEEeCC-----CcEEEEecCCC
Q 010748 279 RNILASASA----D-----KQVKIWDVAAGKCNL--TLEHHTDKVQAVAWNHHSPQILLSGSFD-----RSVVMKDARIS 342 (502)
Q Consensus 279 ~~~l~sgs~----d-----g~v~vwd~~~~~~~~--~~~~h~~~v~~l~~~~~~~~~l~s~s~d-----g~i~iwd~~~~ 342 (502)
+.+++.|+. + ..+.+||+.+.+-.. .+........++.+ ++ .+++.|+.+ ..+.+||+.+.
T Consensus 71 ~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 71 GLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DG-HIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TT-EEEEECCEETTEECCCEEEEETTTT
T ss_pred CEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CC-EEEEEcCCCCCcccccEEEECCCCC
Confidence 446666665 2 468899988765322 22211112222233 34 677776643 35788888764
Q ss_pred CCccce--EeecCCeeEEEeCCCCCCEEEEEeCC-----CcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCC
Q 010748 343 THSGFK--WAVAADVESLAWDPHAEHSFVVSLED-----GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPL 415 (502)
Q Consensus 343 ~~~~~~--~~~~~~v~~v~~~~~~~~~~~~~~~d-----g~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~ 415 (502)
+-.... ........++.+ +..+++.|+.+ ..+.+||+.+.. ...+..+......-.++.+ +
T Consensus 148 ~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~-------W~~~~~~p~~r~~~~~~~~--~ 215 (308)
T 1zgk_A 148 EWHLVAPMLTRRIGVGVAVL---NRLLYAVGGFDGTNRLNSAECYYPERNE-------WRMITAMNTIRSGAGVCVL--H 215 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTTTE-------EEECCCCSSCCBSCEEEEE--T
T ss_pred eEeECCCCCccccceEEEEE---CCEEEEEeCCCCCCcCceEEEEeCCCCe-------EeeCCCCCCccccceEEEE--C
Confidence 311100 001111222333 23466666544 458889987642 1111111111112222333 3
Q ss_pred CCCEEEEEeCC-----CcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCC-----CcEEEEECCCCc
Q 010748 416 VPNLLATGSTD-----KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSK-----GKLEIWDTLSDA 483 (502)
Q Consensus 416 ~~~~l~t~s~d-----g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~d-----g~i~vwd~~~~~ 483 (502)
+ .+++.|+.+ ..+.+||+.+.+...+............+.+ ++. +++.||.+ ..+.+||+.+.+
T Consensus 216 ~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 216 N-CIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGR-IYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp T-EEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTE-EEEECCBCSSCBCCEEEEEETTTTE
T ss_pred C-EEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCE-EEEEcCcCCCcccceEEEEcCCCCE
Confidence 3 677777654 4599999988764433322222222222222 444 67778754 358899987654
No 314
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.04 E-value=0.055 Score=50.17 Aligned_cols=150 Identities=9% Similarity=0.053 Sum_probs=75.1
Q ss_pred CcEEEEEecC------CcEEEEeCCCCeeeE--eeccCCCCeEEEEEcCCCCcEEEEEeC---------CCcEEEEecCC
Q 010748 279 RNILASASAD------KQVKIWDVAAGKCNL--TLEHHTDKVQAVAWNHHSPQILLSGSF---------DRSVVMKDARI 341 (502)
Q Consensus 279 ~~~l~sgs~d------g~v~vwd~~~~~~~~--~~~~h~~~v~~l~~~~~~~~~l~s~s~---------dg~i~iwd~~~ 341 (502)
+.+++.|+.+ ..+.+||+.+.+-.. .+........++.+ ++ .+++.|+. -..+.+||+.+
T Consensus 102 ~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 102 GKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NG-LIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp TEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT-EEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred CEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CC-EEEEECCCCCCCCcccccceEEEeCCCC
Confidence 4577777765 468999998775322 22111111222222 34 66666654 34578888876
Q ss_pred CCCccce-Ee-ecCCeeEEEeCCCCCCEEEEEeCC-----CcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcC
Q 010748 342 STHSGFK-WA-VAADVESLAWDPHAEHSFVVSLED-----GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNP 414 (502)
Q Consensus 342 ~~~~~~~-~~-~~~~v~~v~~~~~~~~~~~~~~~d-----g~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp 414 (502)
..-.... .. .......+.+ +..+++.|+.+ ..+.+||+.+.. ...+..+........++.+
T Consensus 179 ~~W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~~~~yd~~~~~-------W~~~~~~p~~r~~~~~~~~-- 246 (306)
T 3ii7_A 179 ETWTELCPMIEARKNHGLVFV---KDKIFAVGGQNGLGGLDNVEYYDIKLNE-------WKMVSPMPWKGVTVKCAAV-- 246 (306)
T ss_dssp TEEEEECCCSSCCBSCEEEEE---TTEEEEECCEETTEEBCCEEEEETTTTE-------EEECCCCSCCBSCCEEEEE--
T ss_pred CeEEECCCccchhhcceEEEE---CCEEEEEeCCCCCCCCceEEEeeCCCCc-------EEECCCCCCCccceeEEEE--
Confidence 5321110 00 0111222223 23466666543 358889987642 1111111111122223333
Q ss_pred CCCCEEEEEeCC-----CcEEEEECCCCCeeEEEE
Q 010748 415 LVPNLLATGSTD-----KMVKLWDLSNNQPSCIAS 444 (502)
Q Consensus 415 ~~~~~l~t~s~d-----g~i~vwd~~~~~~~~~~~ 444 (502)
++ .+++.|+.+ ..+.+||+.+.+...+..
T Consensus 247 ~~-~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 280 (306)
T 3ii7_A 247 GS-IVYVLAGFQGVGRLGHILEYNTETDKWVANSK 280 (306)
T ss_dssp TT-EEEEEECBCSSSBCCEEEEEETTTTEEEEEEE
T ss_pred CC-EEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCC
Confidence 33 777888754 458899998876544433
No 315
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.00 E-value=0.25 Score=46.91 Aligned_cols=241 Identities=11% Similarity=0.060 Sum_probs=122.9
Q ss_pred CcceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceee
Q 010748 192 FPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLG 271 (502)
Q Consensus 192 ~~~~~~~~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 271 (502)
.|..++| .|+|+++++ ...|.|++++.+ +. .+... .. ...........
T Consensus 30 ~P~~ia~-------~pdG~l~V~-e~~g~I~~~d~~-G~--~~~~~--------------------~~-v~~~g~~g~~g 77 (354)
T 3a9g_A 30 VPWSIAP-------LGGGRYLVT-ERPGRLVLISPS-GK--KLVAS--------------------FD-VANVGEAGLLG 77 (354)
T ss_dssp CEEEEEE-------EETTEEEEE-ETTTEEEEECSS-CE--EEEEE--------------------CC-CCCSTTCSEEE
T ss_pred CCeEEEE-------cCCCeEEEE-eCCCEEEEEeCC-Cc--eEeec--------------------cc-eeecCCCceee
Confidence 3566666 578875555 556999888632 11 11100 00 11122356889
Q ss_pred EEeccC---CCcEEEEEec---C----CcEEEEeCCCC-------eee-Eeecc-CCCCeEEEEEcCCCCcEEEEEeC--
Q 010748 272 LAWNKE---FRNILASASA---D----KQVKIWDVAAG-------KCN-LTLEH-HTDKVQAVAWNHHSPQILLSGSF-- 330 (502)
Q Consensus 272 l~~~~~---~~~~l~sgs~---d----g~v~vwd~~~~-------~~~-~~~~~-h~~~v~~l~~~~~~~~~l~s~s~-- 330 (502)
|+|+|+ ++.++++-+. + +.|..|++... +.+ ..+.. .......|.|.|++ .++++.+.
T Consensus 78 ia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG-~Lyvt~G~~~ 156 (354)
T 3a9g_A 78 LALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDG-MLYITTGDAA 156 (354)
T ss_dssp EEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTS-CEEEECCCTT
T ss_pred EEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCC-cEEEEECCCC
Confidence 999997 4544444432 3 56777876643 111 11221 11124679999999 65555432
Q ss_pred -----------CCcEEEEecCCCCC------ccceEee-cCCeeEEEeCCCCCCEEEEEeCCC---cEEEEECCCCCC-C
Q 010748 331 -----------DRSVVMKDARISTH------SGFKWAV-AADVESLAWDPHAEHSFVVSLEDG---TIKGFDIRTAKS-D 388 (502)
Q Consensus 331 -----------dg~i~iwd~~~~~~------~~~~~~~-~~~v~~v~~~~~~~~~~~~~~~dg---~v~i~d~~~~~~-~ 388 (502)
.|.|.-++....-. ....+.. -.....++|+|....++++-...+ .|.+.. .+.. .
T Consensus 157 ~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyG 234 (354)
T 3a9g_A 157 DPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYG 234 (354)
T ss_dssp CGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCC
T ss_pred CCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCC
Confidence 24555555543200 0112221 123567999995444444433222 233332 1110 0
Q ss_pred C--------CCCCCccceEEeccCCCeeEEEEc-------CCCCCEEEEEeCCCcEEEEECCCC-CeeEEEEe-cCCCCc
Q 010748 389 P--------DSTSQQSSFTLHAHDKAVCTISYN-------PLVPNLLATGSTDKMVKLWDLSNN-QPSCIASR-NPKAGA 451 (502)
Q Consensus 389 ~--------~~~~~~~~~~~~~h~~~v~~l~~s-------p~~~~~l~t~s~dg~i~vwd~~~~-~~~~~~~~-~~~~~~ 451 (502)
+ ......++..+.........++|. .++ .++++.-..+.|...++... .......+ ......
T Consensus 235 wp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G-~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~r 313 (354)
T 3a9g_A 235 WPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRG-WLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGR 313 (354)
T ss_dssp TTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTT-EEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCC
T ss_pred CCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCC-cEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCC
Confidence 0 000013444442223457788884 344 66666666778888888753 22112222 223467
Q ss_pred EEEEEEcCCCCcEEEEEe
Q 010748 452 VFSVAFSEDSPFVLAIGG 469 (502)
Q Consensus 452 v~~~~~spd~~~ll~sg~ 469 (502)
+..+++.|||. |+++..
T Consensus 314 p~~v~~~pDG~-lyv~~~ 330 (354)
T 3a9g_A 314 LRDVVIDDDGG-ILISTS 330 (354)
T ss_dssp EEEEEECTTSC-EEEEEC
T ss_pred eeEEEECCCCc-EEEEEe
Confidence 89999999997 555543
No 316
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.97 E-value=0.16 Score=48.17 Aligned_cols=183 Identities=13% Similarity=0.089 Sum_probs=101.6
Q ss_pred cceeeEEecc--CCCcEEEEEec---CCcEEEEeCCCC----eeeEeeccC-CCCeEEEEEcCCCCcEEEEEeC------
Q 010748 267 DSVLGLAWNK--EFRNILASASA---DKQVKIWDVAAG----KCNLTLEHH-TDKVQAVAWNHHSPQILLSGSF------ 330 (502)
Q Consensus 267 ~~V~~l~~~~--~~~~~l~sgs~---dg~v~vwd~~~~----~~~~~~~~h-~~~v~~l~~~~~~~~~l~s~s~------ 330 (502)
.....|.+.+ ++..+|+.+.. ..+|.+|++... ..+.++.+. -...+.+.+.++| .+.++...
T Consensus 112 f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G-~fyvt~~~~ftd~~ 190 (355)
T 3sre_A 112 FNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPE-HFYATNDHYFIDPY 190 (355)
T ss_dssp CCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETT-EEEEEESCSCSSHH
T ss_pred eeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCC-CEEecCCcEeCCcc
Confidence 4556666655 33334544422 457788776543 223344332 2357889999998 66665531
Q ss_pred -----------CCcEEEEecCCCCCccceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceE
Q 010748 331 -----------DRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFT 399 (502)
Q Consensus 331 -----------dg~i~iwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~ 399 (502)
.|.|..++. .+ .......-...+.++|+|++..++++-+..+.|..|++..... ......
T Consensus 191 ~~~~e~~~~~~~g~vyr~d~--~~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~------l~~~~~ 261 (355)
T 3sre_A 191 LKSWEMHLGLAWSFVTYYSP--ND-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWT------LTPLRV 261 (355)
T ss_dssp HHHHHHHTTCCCEEEEEECT--TC-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSC------EEEEEE
T ss_pred cccchhhccCCccEEEEEEC--Ce-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCc------EecCEE
Confidence 244555554 22 2223333456789999999876666677788999999874210 111222
Q ss_pred EeccCCCeeEEEEcC-CCCCEEEEEeCC-CcEEEEECCCCCeeEEEEecC---CCCcEEEEEEcCCCC
Q 010748 400 LHAHDKAVCTISYNP-LVPNLLATGSTD-KMVKLWDLSNNQPSCIASRNP---KAGAVFSVAFSEDSP 462 (502)
Q Consensus 400 ~~~h~~~v~~l~~sp-~~~~~l~t~s~d-g~i~vwd~~~~~~~~~~~~~~---~~~~v~~~~~spd~~ 462 (502)
+ ...+..-.+++.+ +| ++.+++..+ +.|..|+.....+..+..+.. ....+.++ |..+|.
T Consensus 262 ~-~~~g~PDGi~vD~e~G-~lwva~~~~g~~v~~~~P~~~~~s~v~rI~~~~~~~~~v~~v-~~ddG~ 326 (355)
T 3sre_A 262 L-SFDTLVDNISVDPVTG-DLWVGCHPNGMRIFFYDAENPPGSEVLRIQDILSEEPKVTVV-YAENGT 326 (355)
T ss_dssp E-ECSSEEEEEEECTTTC-CEEEEEESCHHHHHSCCTTSCCCEEEEEEECTTSSSCEEEEE-EEECSS
T ss_pred E-eCCCCCceEEEeCCCC-cEEEEecCCceEEEEECCCCCCCCEEEEEEccCCCCcEEEEE-EEcCCC
Confidence 2 2345677889998 57 666666544 345555554323334443331 23334444 444665
No 317
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.94 E-value=0.26 Score=54.65 Aligned_cols=243 Identities=13% Similarity=0.180 Sum_probs=137.4
Q ss_pred CCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEE
Q 010748 206 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASA 285 (502)
Q Consensus 206 s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sg 285 (502)
+|..+.||.=. ..++.|||+++...+.. + .....|.-=.|-.. +.|+-.
T Consensus 74 nP~~~iiALra-g~~lQiFnl~~k~klks-------------------------~---~~~e~VvfWkWis~--~~l~lV 122 (1630)
T 1xi4_A 74 NPASKVIALKA-GKTLQIFNIEMKSKMKA-------------------------H---TMTDDVTFWKWISL--NTVALV 122 (1630)
T ss_pred CCCcceEEEec-CCeEEEeehHHhhhhcc-------------------------c---ccCCCceEEEecCC--CeeEEE
Confidence 67788888765 68999999975222211 1 12345777777655 245544
Q ss_pred ecCCcEEEEeCCC-CeeeEeeccC----CCCeEEEEEcCCCCcEEEEEe------CCCcEEEEecCCCCCccceEeecCC
Q 010748 286 SADKQVKIWDVAA-GKCNLTLEHH----TDKVQAVAWNHHSPQILLSGS------FDRSVVMKDARISTHSGFKWAVAAD 354 (502)
Q Consensus 286 s~dg~v~vwd~~~-~~~~~~~~~h----~~~v~~l~~~~~~~~~l~s~s------~dg~i~iwd~~~~~~~~~~~~~~~~ 354 (502)
+. ..|.-|++.. ..++..|..| ...|..-..+++..-.+++|- -.|.+.+|......... ..+|.+.
T Consensus 123 T~-~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~-iegha~~ 200 (1630)
T 1xi4_A 123 TD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP-IEGHAAS 200 (1630)
T ss_pred cC-CeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchh-hhHhHhh
Confidence 43 5799999963 3455555444 456777777787744444442 35788899887654332 3333333
Q ss_pred eeEEEeC--CCCCCEEEEEeC---CCcEEEEECCCC-CCCCCCCCCccceEE---eccCCCeeEEEEcCCCCCEEEEEeC
Q 010748 355 VESLAWD--PHAEHSFVVSLE---DGTIKGFDIRTA-KSDPDSTSQQSSFTL---HAHDKAVCTISYNPLVPNLLATGST 425 (502)
Q Consensus 355 v~~v~~~--~~~~~~~~~~~~---dg~v~i~d~~~~-~~~~~~~~~~~~~~~---~~h~~~v~~l~~sp~~~~~l~t~s~ 425 (502)
...+... +....+|+.+.. .+.+++.++... ...+.. ..+.+-.+ .....-..++..++.. .++...+.
T Consensus 201 F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f-~kk~~~~~~~~~~~~Dfpv~~~vs~k~-g~iy~itk 278 (1630)
T 1xi4_A 201 FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF-PKKAVDVFFPPEAQNDFPVAMQISEKH-DVVFLITK 278 (1630)
T ss_pred hheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCC-ccccccccCCcccccCcceEEEecccc-CEEEEEec
Confidence 3222221 111222332221 368999988653 111100 00111111 1123334567777766 78888889
Q ss_pred CCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccc
Q 010748 426 DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 426 dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~ 486 (502)
-|.|.+||+.++. +++.-.-...+|+..+.++.... +++....|.|.--.+.....+.
T Consensus 279 ~G~~~~~d~~t~~--~i~~~ris~~~iF~~~~~~~~~g-~~~vnr~G~vl~v~v~~~~iv~ 336 (1630)
T 1xi4_A 279 YGYIHLYDLETGT--CIYMNRISGETIFVTAPHEATAG-IIGVNRKGQVLSVCVEEENIIP 336 (1630)
T ss_pred CceEEEEecccch--hhhhccccCCceEEeccCCCCCc-eEEEcCCceEEEEEEccchhhh
Confidence 9999999999987 44444344556666655544333 4445677777766666555543
No 318
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.76 E-value=0.27 Score=46.50 Aligned_cols=187 Identities=6% Similarity=-0.033 Sum_probs=104.4
Q ss_pred ceeeEEeccCCCcEEEEEe-------------cCCcEEEEeCCCC--eee-Eeecc-----CCCCeEEEEEcC--CCCcE
Q 010748 268 SVLGLAWNKEFRNILASAS-------------ADKQVKIWDVAAG--KCN-LTLEH-----HTDKVQAVAWNH--HSPQI 324 (502)
Q Consensus 268 ~V~~l~~~~~~~~~l~sgs-------------~dg~v~vwd~~~~--~~~-~~~~~-----h~~~v~~l~~~~--~~~~~ 324 (502)
..-.+...|+ + ++++++ .+|.|.++|+.+. +.. ..+.+ ..-....+.+.+ ++..+
T Consensus 51 G~EDi~~~~~-G-~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~ 128 (355)
T 3sre_A 51 GSEDLEILPN-G-LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVY 128 (355)
T ss_dssp CCCEEEECTT-S-EEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEE
T ss_pred CcceeEEcCC-C-eEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEE
Confidence 3456667776 4 344443 6899999998742 221 12222 223567777765 34334
Q ss_pred EEEEeC---CCcEEEEecCCCCCccceE-ee----cCCeeEEEeCCCCCCEEEEEe-----------------CCCcEEE
Q 010748 325 LLSGSF---DRSVVMKDARISTHSGFKW-AV----AADVESLAWDPHAEHSFVVSL-----------------EDGTIKG 379 (502)
Q Consensus 325 l~s~s~---dg~i~iwd~~~~~~~~~~~-~~----~~~v~~v~~~~~~~~~~~~~~-----------------~dg~v~i 379 (502)
|+++.. ..+|.+|++.......... .. -...+.+.+.+++. ++++.. ..|.|+.
T Consensus 129 L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr 207 (355)
T 3sre_A 129 LLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVTY 207 (355)
T ss_dssp EEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHHHTTCCCEEEEE
T ss_pred EEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-EEecCCcEeCCcccccchhhccCCccEEEE
Confidence 544433 4678888876543322222 11 23467888888764 333332 1245555
Q ss_pred EECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCC-CCeeEEEEecCCCCcEEEEEEc
Q 010748 380 FDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN-NQPSCIASRNPKAGAVFSVAFS 458 (502)
Q Consensus 380 ~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~-~~~~~~~~~~~~~~~v~~~~~s 458 (502)
++... +..+...-...+.++|+|++..++++-+..+.|..|++.. +.......+ ...+..-.+++.
T Consensus 208 ~d~~~------------~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD 274 (355)
T 3sre_A 208 YSPND------------VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVD 274 (355)
T ss_dssp ECTTC------------CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEEC
T ss_pred EECCe------------EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEe
Confidence 55421 1222223345689999999855555666688999999864 333222233 224667889999
Q ss_pred C-CCCcEEEEEeCC
Q 010748 459 E-DSPFVLAIGGSK 471 (502)
Q Consensus 459 p-d~~~ll~sg~~d 471 (502)
+ +|. +.+++..+
T Consensus 275 ~e~G~-lwva~~~~ 287 (355)
T 3sre_A 275 PVTGD-LWVGCHPN 287 (355)
T ss_dssp TTTCC-EEEEEESC
T ss_pred CCCCc-EEEEecCC
Confidence 9 588 45545433
No 319
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.62 E-value=0.15 Score=47.36 Aligned_cols=186 Identities=10% Similarity=0.059 Sum_probs=90.3
Q ss_pred CcEEEEEec----C-------CcEEEEeCCCCeeeE--eeccCCCCeEEEEEcCCCCcEEEEEeCC--------CcEEEE
Q 010748 279 RNILASASA----D-------KQVKIWDVAAGKCNL--TLEHHTDKVQAVAWNHHSPQILLSGSFD--------RSVVMK 337 (502)
Q Consensus 279 ~~~l~sgs~----d-------g~v~vwd~~~~~~~~--~~~~h~~~v~~l~~~~~~~~~l~s~s~d--------g~i~iw 337 (502)
+.+++.|+. + ..+.+||+.+++-.. .+.........+.+ ++ .+++.|+.+ ..+.+|
T Consensus 46 ~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~-~lyv~GG~~~~~~~~~~~~~~~~ 122 (315)
T 4asc_A 46 NQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA--LN-SIYVVGGREIKDGERCLDSVMCY 122 (315)
T ss_dssp CCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE--TT-EEEEECCEESSTTCCBCCCEEEE
T ss_pred CEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE--CC-EEEEEeCCcCCCCCcccceEEEE
Confidence 457777763 1 127788988765322 11111111112222 33 677777642 458888
Q ss_pred ecCCCCCccce--EeecCCeeEEEeCCCCCCEEEEEeC-C-----CcEEEEECCCCCCCCCCCCCccceEEeccCCCeeE
Q 010748 338 DARISTHSGFK--WAVAADVESLAWDPHAEHSFVVSLE-D-----GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCT 409 (502)
Q Consensus 338 d~~~~~~~~~~--~~~~~~v~~v~~~~~~~~~~~~~~~-d-----g~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 409 (502)
|+.+.+-.... ........++.+ +..+++.|+. + ..+.+||+.+.. ...+..+......-.+
T Consensus 123 d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-------W~~~~~~p~~r~~~~~ 192 (315)
T 4asc_A 123 DRLSFKWGESDPLPYVVYGHTVLSH---MDLVYVIGGKGSDRKCLNKMCVYDPKKFE-------WKELAPMQTARSLFGA 192 (315)
T ss_dssp ETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEECCBCTTSCBCCCEEEEETTTTE-------EEECCCCSSCCBSCEE
T ss_pred CCCCCcEeECCCCCCcccceeEEEE---CCEEEEEeCCCCCCcccceEEEEeCCCCe-------EEECCCCCCchhceEE
Confidence 88764311100 000111122222 2346666665 2 358889987642 1111111111111222
Q ss_pred EEEcCCCCCEEEEEeCCC-----cEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCC------------
Q 010748 410 ISYNPLVPNLLATGSTDK-----MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKG------------ 472 (502)
Q Consensus 410 l~~sp~~~~~l~t~s~dg-----~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg------------ 472 (502)
+.+ ++ .+++.|+.++ .+.+||+.+.+...+............+.+ ++. +++.||.++
T Consensus 193 ~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-l~v~GG~~~~~~~~~~~~~~~ 266 (315)
T 4asc_A 193 TVH--DG-RIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL--VGT-LYAIGGFATLETESGELVPTE 266 (315)
T ss_dssp EEE--TT-EEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE-EEEEEEEEEEECTTSCEEEEE
T ss_pred EEE--CC-EEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE--CCE-EEEECCccccCcCCccccccc
Confidence 222 33 6777777654 488999988765444332222222222333 444 677787642
Q ss_pred --cEEEEECCCCc
Q 010748 473 --KLEIWDTLSDA 483 (502)
Q Consensus 473 --~i~vwd~~~~~ 483 (502)
.+.+||+.+.+
T Consensus 267 ~~~v~~yd~~~~~ 279 (315)
T 4asc_A 267 LNDIWRYNEEEKK 279 (315)
T ss_dssp EEEEEEEETTTTE
T ss_pred cCcEEEecCCCCh
Confidence 47788987653
No 320
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.60 E-value=0.25 Score=45.77 Aligned_cols=148 Identities=12% Similarity=0.124 Sum_probs=73.5
Q ss_pred CcEEEEEecC-----CcEEEEeCCCCeeeE--eeccCCCCeEEEEEcCCCCcEEEEEeCC-----CcEEEEecCCCCCcc
Q 010748 279 RNILASASAD-----KQVKIWDVAAGKCNL--TLEHHTDKVQAVAWNHHSPQILLSGSFD-----RSVVMKDARISTHSG 346 (502)
Q Consensus 279 ~~~l~sgs~d-----g~v~vwd~~~~~~~~--~~~~h~~~v~~l~~~~~~~~~l~s~s~d-----g~i~iwd~~~~~~~~ 346 (502)
+.+++.|+.+ ..+.+||+.+.+-.. .+........++.+ ++ .+++.|+.+ ..+.+||+.+..-..
T Consensus 122 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 122 GHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NR-LLYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp TEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CC-EEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 4466666643 468899988765322 22211112222333 34 677777654 458888887643111
Q ss_pred ce--EeecCCeeEEEeCCCCCCEEEEEeCC-----CcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCE
Q 010748 347 FK--WAVAADVESLAWDPHAEHSFVVSLED-----GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNL 419 (502)
Q Consensus 347 ~~--~~~~~~v~~v~~~~~~~~~~~~~~~d-----g~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~ 419 (502)
.. ........++.+ +..+++.|+.+ ..+.+||+.+.. ...+..+.........+.+ ++ .+
T Consensus 199 ~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~-------W~~~~~~p~~r~~~~~~~~--~~-~i 265 (308)
T 1zgk_A 199 ITAMNTIRSGAGVCVL---HNCIYAAGGYDGQDQLNSVERYDVETET-------WTFVAPMKHRRSALGITVH--QG-RI 265 (308)
T ss_dssp CCCCSSCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTTE-------EEECCCCSSCCBSCEEEEE--TT-EE
T ss_pred CCCCCCccccceEEEE---CCEEEEEeCCCCCCccceEEEEeCCCCc-------EEECCCCCCCccceEEEEE--CC-EE
Confidence 00 001111223333 24467777654 468899987642 1111111111111222222 23 67
Q ss_pred EEEEeCC-----CcEEEEECCCCCeeEE
Q 010748 420 LATGSTD-----KMVKLWDLSNNQPSCI 442 (502)
Q Consensus 420 l~t~s~d-----g~i~vwd~~~~~~~~~ 442 (502)
++.|+.+ ..+.+||+.+.+...+
T Consensus 266 ~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 293 (308)
T 1zgk_A 266 YVLGGYDGHTFLDSVECYDPDTDTWSEV 293 (308)
T ss_dssp EEECCBCSSCBCCEEEEEETTTTEEEEE
T ss_pred EEEcCcCCCcccceEEEEcCCCCEEeec
Confidence 7777654 3478888887765444
No 321
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.38 E-value=0.52 Score=43.29 Aligned_cols=145 Identities=11% Similarity=0.105 Sum_probs=71.2
Q ss_pred CcEEEEEecCC-----cEEEEeCCCCeeeE--eeccCCCCeEEEEEcCCCCcEEEEEeCC-------CcEEEEecCCCCC
Q 010748 279 RNILASASADK-----QVKIWDVAAGKCNL--TLEHHTDKVQAVAWNHHSPQILLSGSFD-------RSVVMKDARISTH 344 (502)
Q Consensus 279 ~~~l~sgs~dg-----~v~vwd~~~~~~~~--~~~~h~~~v~~l~~~~~~~~~l~s~s~d-------g~i~iwd~~~~~~ 344 (502)
+.+++.|+.++ .+.+||+.+.+-.. .+........++.+ ++ .+++.|+.+ ..+.+||+.+..-
T Consensus 109 ~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 109 GLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GG-LLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp TEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT-EEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred CEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CC-EEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 45777777653 57889988765332 22211111222222 33 667766643 3578888876432
Q ss_pred ccc--eEeecCCeeEEEeCCCCCCEEEEEeCC-----CcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCC
Q 010748 345 SGF--KWAVAADVESLAWDPHAEHSFVVSLED-----GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP 417 (502)
Q Consensus 345 ~~~--~~~~~~~v~~v~~~~~~~~~~~~~~~d-----g~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~ 417 (502)
... .........++.+ +..+++.|+.+ ..+.+||+.+.. ...+..+.........+.+ ++
T Consensus 186 ~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~-------W~~~~~~~~~r~~~~~~~~--~~- 252 (302)
T 2xn4_A 186 TYIAEMSTRRSGAGVGVL---NNLLYAVGGHDGPLVRKSVEVYDPTTNA-------WRQVADMNMCRRNAGVCAV--NG- 252 (302)
T ss_dssp EEECCCSSCCBSCEEEEE---TTEEEEECCBSSSSBCCCEEEEETTTTE-------EEEECCCSSCCBSCEEEEE--TT-
T ss_pred EECCCCccccccccEEEE---CCEEEEECCCCCCcccceEEEEeCCCCC-------EeeCCCCCCccccCeEEEE--CC-
Confidence 110 0000111222333 23467777654 368899987641 1111111111111122222 33
Q ss_pred CEEEEEeCCC-----cEEEEECCCCCe
Q 010748 418 NLLATGSTDK-----MVKLWDLSNNQP 439 (502)
Q Consensus 418 ~~l~t~s~dg-----~i~vwd~~~~~~ 439 (502)
.+++.|+.++ .+.+||+.+.+.
T Consensus 253 ~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 253 LLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp EEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred EEEEECCcCCCcccccEEEEcCCCCeE
Confidence 6777777553 488999987763
No 322
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.29 E-value=0.76 Score=43.25 Aligned_cols=242 Identities=12% Similarity=0.074 Sum_probs=121.5
Q ss_pred CCCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccC---CCcEE
Q 010748 206 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKE---FRNIL 282 (502)
Q Consensus 206 s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~---~~~~l 282 (502)
.|+|.++++--..|.|++++...+.. .+... ....+.......+.|+++|+ ++.+.
T Consensus 40 ~pdG~llVter~~G~I~~v~~~~g~~-~~v~~--------------------~~~v~~~g~~GllGia~~Pdf~~~g~lY 98 (347)
T 3das_A 40 LPGGDLLVSSRDEATITRVDAKTGRK-TELGE--------------------VPGVSPSGEGGLLGIALSPDYASDHMVY 98 (347)
T ss_dssp CTTSCEEEEETTTCEEEEECTTTCCE-EEEEE--------------------CTTCCCBTTBSEEEEEECTTHHHHCEEE
T ss_pred cCCCcEEEEEecCCEEEEEECCCCcE-eeecc--------------------cCceeecCCCCceeeEeccccccCCEEE
Confidence 68998777776589999887543221 11000 00112234567899999985 24333
Q ss_pred EEE--ecCCcEEEEeCCCC----------eee-Eeec-cCCCCeEEEEEcCCCCcEEEEEeC-------------CCcEE
Q 010748 283 ASA--SADKQVKIWDVAAG----------KCN-LTLE-HHTDKVQAVAWNHHSPQILLSGSF-------------DRSVV 335 (502)
Q Consensus 283 ~sg--s~dg~v~vwd~~~~----------~~~-~~~~-~h~~~v~~l~~~~~~~~~l~s~s~-------------dg~i~ 335 (502)
++- ..++.|.-|.+..+ +.+ ..+. ........|.|.|++ .++++.+. .|.|.
T Consensus 99 v~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG-~Lyvt~Gd~~~~~~~qd~~~~~G~Il 177 (347)
T 3das_A 99 AYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDK-MLYAGTGESGDTGLSQDRKSLGGKIL 177 (347)
T ss_dssp EEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTS-CEEEECBCTTCGGGTTCTTCSTTCEE
T ss_pred EEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCC-CEEEEECCCCCCccccCCCCCCCEEE
Confidence 322 23455666665541 111 1221 111234579999999 66665432 34555
Q ss_pred EEecCCCCC------ccceEeec-CCeeEEEeCCCCCCEEEEE-eCCCcEEEEECCCCCCC-C--------CCCCCccce
Q 010748 336 MKDARISTH------SGFKWAVA-ADVESLAWDPHAEHSFVVS-LEDGTIKGFDIRTAKSD-P--------DSTSQQSSF 398 (502)
Q Consensus 336 iwd~~~~~~------~~~~~~~~-~~v~~v~~~~~~~~~~~~~-~~dg~v~i~d~~~~~~~-~--------~~~~~~~~~ 398 (502)
-.+....-. ....+... .....++|+|++. ++++- +.++.=.+.-+..+... + ......++.
T Consensus 178 Ri~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~-L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~ 256 (347)
T 3das_A 178 RMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQR-LFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVA 256 (347)
T ss_dssp EECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCC-EEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSE
T ss_pred EEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCC-EEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcE
Confidence 555442200 01122211 2356789999654 44332 22332223223322110 0 011123455
Q ss_pred EEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCe--eEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCC
Q 010748 399 TLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP--SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKG 472 (502)
Q Consensus 399 ~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~--~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg 472 (502)
.+..+....+.++|.. + .+++..-..+.|....+..... .....+....+.+..++..|||...+++...+|
T Consensus 257 ~~~~~~~ap~G~~~~~-g-~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td~~~g 330 (347)
T 3das_A 257 QWSTDEASPSGIAYAE-G-SVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTSNTDG 330 (347)
T ss_dssp EECTTTCCEEEEEEET-T-EEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEECTTSS
T ss_pred ecCCCCCCCcceEEEc-C-ceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEcCCCC
Confidence 5554434667888874 3 5666655566676666654431 112223344578999999999973333333343
No 323
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.19 E-value=0.16 Score=44.05 Aligned_cols=185 Identities=8% Similarity=0.023 Sum_probs=94.7
Q ss_pred CcEEEEEecCCcEEEEeCCCCe------eeEeecc-CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccc----
Q 010748 279 RNILASASADKQVKIWDVAAGK------CNLTLEH-HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF---- 347 (502)
Q Consensus 279 ~~~l~sgs~dg~v~vwd~~~~~------~~~~~~~-h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~---- 347 (502)
..+|+....| +|+.=....+. ...++-. -=..+..++|+|++ .+.++ .+|.+.-.+..+......
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G-~LYaV--~~G~Ly~~~~~t~~~~~W~~s~ 79 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGG-ELYGV--LNDKIYKGTPPTHDNDNWMGRA 79 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTS-CEEEE--ETTEEEEESCCCSTTCCHHHHC
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCc-cEEEE--eCCeEEEECCCCCCcccccccc
Confidence 4567777777 66655554443 1222211 12477899999977 54444 677766666544322211
Q ss_pred -eEee--cCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEec-cCCCeeEEEEcCCCCCEEEEE
Q 010748 348 -KWAV--AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA-HDKAVCTISYNPLVPNLLATG 423 (502)
Q Consensus 348 -~~~~--~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~sp~~~~~l~t~ 423 (502)
.... -....++.|.|++. |+++ .||.|+-++-.+.....-. ..-..+.. -=..+..|.|.|+| .+.+..
T Consensus 80 t~IG~~Gw~~F~a~~fD~~G~--LYav-~dG~iyr~~pP~~~~~~Wl---~~a~~vg~~gw~~~~~lff~p~G-~Lyav~ 152 (236)
T 1tl2_A 80 KKIGNGGWNQFQFLFFDPNGY--LYAV-SKDKLYKASPPQSDTDNWI---ARATEVGSGGWSGFKFLFFHPNG-YLYAVH 152 (236)
T ss_dssp EEEECSCGGGCSEEEECTTSC--EEEE-ETTEEEEESCCCSTTCCHH---HHSEEEECSSGGGEEEEEECTTS-CEEEEE
T ss_pred cEecccccccceEEEECCCCC--EEEe-CCCEEEEeCCCcCCCCcee---ccccEeccCCCCceEEEEECCCc-eEEEEe
Confidence 1110 01147899999764 4444 5699887775432110000 00011111 11467999999987 555444
Q ss_pred eCCCcEEEEECCCCCe-----eEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010748 424 STDKMVKLWDLSNNQP-----SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 424 s~dg~i~vwd~~~~~~-----~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~ 481 (502)
|+.++-+....... .........-...+.+.|.+++. ++++. +| ++|....
T Consensus 153 --dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~-l~~v~--~g--~~Y~~~~ 208 (236)
T 1tl2_A 153 --GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT-LFGVQ--GG--KFYEDYP 208 (236)
T ss_dssp --TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC-EEEEE--TT--EEEEESC
T ss_pred --CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc-EEEEe--CC--eEEecCC
Confidence 77754433332110 00111112223455577999997 45543 66 4554433
No 324
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.18 E-value=0.34 Score=45.93 Aligned_cols=64 Identities=13% Similarity=0.035 Sum_probs=32.6
Q ss_pred CeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEE
Q 010748 354 DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG 423 (502)
Q Consensus 354 ~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~ 423 (502)
....++|. .+ .++++....+.|...++........ ......+......+..+++.|+| .++++.
T Consensus 269 ap~G~~~~-~G-~l~v~~~~~~~v~~v~~~~~~~~~~---~~~~~~~~~~~~rp~~v~~~pdG-~lyv~~ 332 (352)
T 2ism_A 269 PPGNLAFF-RG-DLYVAGLRGQALLRLVLEGERGRWR---VLRVETALSGFGRLREVQVGPDG-ALYVTT 332 (352)
T ss_dssp CEEEEEEE-TT-EEEEEETTTTEEEEEEEEEETTEEE---EEEEEEEEESSCCEEEEEECTTS-CEEEEE
T ss_pred CCcceEEE-CC-EEEEEECCCCEEEEEEECCCCccee---ecchheecccCCCeeEEEECCCC-cEEEEE
Confidence 34566663 23 3555555666777777654310000 00011221223567889999987 555544
No 325
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.08 E-value=0.45 Score=52.81 Aligned_cols=197 Identities=11% Similarity=0.137 Sum_probs=119.7
Q ss_pred EeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceE-ee
Q 010748 273 AWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-AV 351 (502)
Q Consensus 273 ~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~ 351 (502)
-.||. .++||.=. ..++.|+|+.+...+.++.. ...|.--.|-... .|+-.+ +..|..|++.....+...+ .+
T Consensus 72 IMnP~-~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~--~l~lVT-~~aVyHW~~~~~s~P~k~fdR~ 145 (1630)
T 1xi4_A 72 IMNPA-SKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN--TVALVT-DNAVYHWSMEGESQPVKMFDRH 145 (1630)
T ss_pred ccCCC-cceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCC--eeEEEc-CCeEEEeccCCCCccHHHHhcc
Confidence 35676 55665554 67899999999888777764 4567777786654 333332 5689999997543332222 22
Q ss_pred ----cCCeeEEEeCCCCCCEEEEEe------CCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEc--CCCCCE
Q 010748 352 ----AADVESLAWDPHAEHSFVVSL------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYN--PLVPNL 419 (502)
Q Consensus 352 ----~~~v~~v~~~~~~~~~~~~~~------~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s--p~~~~~ 419 (502)
...|..-..+++...++++|- -.|.+.+|.+... ....+.+|.+.-..+... +....+
T Consensus 146 ~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~----------~sQ~iegha~~F~~~~~~~~~~~~~l 215 (1630)
T 1xi4_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK----------VSQPIEGHAASFAQFKMEGNAEESTL 215 (1630)
T ss_pred hhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc----------cchhhhHhHhhhheeccCCCCCCceE
Confidence 456777778888777777764 4578999998764 233444554433333222 111123
Q ss_pred EEEEeC---CCcEEEEECCCC---CeeE----E-EEec--CCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccc
Q 010748 420 LATGST---DKMVKLWDLSNN---QPSC----I-ASRN--PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 420 l~t~s~---dg~i~vwd~~~~---~~~~----~-~~~~--~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~ 486 (502)
++.+.. .+.++|-++... .+.. + ..++ .......++..++... ++..-+.-|.|.+||+.|+.++.
T Consensus 216 ~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g-~iy~itk~G~~~~~d~~t~~~i~ 294 (1630)
T 1xi4_A 216 FCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGTCIY 294 (1630)
T ss_pred EEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccC-EEEEEecCceEEEEecccchhhh
Confidence 332222 267888887543 1100 0 0111 1133445778888776 57777889999999999999874
No 326
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.99 E-value=0.78 Score=44.12 Aligned_cols=141 Identities=17% Similarity=0.211 Sum_probs=87.7
Q ss_pred CCcEEEEeCCCCeeeEeeccC----CCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCcc-----------ceEe--
Q 010748 288 DKQVKIWDVAAGKCNLTLEHH----TDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG-----------FKWA-- 350 (502)
Q Consensus 288 dg~v~vwd~~~~~~~~~~~~h----~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~-----------~~~~-- 350 (502)
++.||.-++.....-+.+..- -..|..+..+|.| .+|+.. .+..|.|..+..+.... ..+.
T Consensus 40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG-~lLAl~-g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~ 117 (452)
T 3pbp_A 40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSG-DLLCLF-NDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSID 117 (452)
T ss_dssp TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTS-SEEEEE-CSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGG
T ss_pred CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCC-CEEEEe-cCCeEEEEEecCccccCcccccccccceeEEEcC
Confidence 367887787744333333321 2357889999999 666665 45688888876322111 1111
Q ss_pred -----ecCCeeEEEeCCCCCC--EEEEEeCCCcEEEEECCCCCCCCC-CCCCccceEEeccCCCeeEEEEcCCCCCEEEE
Q 010748 351 -----VAADVESLAWDPHAEH--SFVVSLEDGTIKGFDIRTAKSDPD-STSQQSSFTLHAHDKAVCTISYNPLVPNLLAT 422 (502)
Q Consensus 351 -----~~~~v~~v~~~~~~~~--~~~~~~~dg~v~i~d~~~~~~~~~-~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t 422 (502)
...+|..+.|+|-+.. .+++-..|+.|++||+......+. .......+.+......|.+++|.+.+ -.|..
T Consensus 118 ~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~-lTLYv 196 (452)
T 3pbp_A 118 EEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDG-LTLYC 196 (452)
T ss_dssp GCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTS-SCEEE
T ss_pred CcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCC-cEEEE
Confidence 2467999999997543 899999999999999987321110 00001112222334678999999965 66666
Q ss_pred Ee--CCCcEEE
Q 010748 423 GS--TDKMVKL 431 (502)
Q Consensus 423 ~s--~dg~i~v 431 (502)
.+ ..|-|+-
T Consensus 197 l~~t~~GDIYA 207 (452)
T 3pbp_A 197 LNTTEGGDIFA 207 (452)
T ss_dssp EECTTSCEEEE
T ss_pred EecCCCCCEEE
Confidence 55 6777764
No 327
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.97 E-value=0.29 Score=46.36 Aligned_cols=57 Identities=11% Similarity=0.034 Sum_probs=31.1
Q ss_pred cEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCC------cEEEEECCCCccccc
Q 010748 428 MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKG------KLEIWDTLSDAGISN 487 (502)
Q Consensus 428 ~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg------~i~vwd~~~~~~~~~ 487 (502)
.+.+||+.+.+...+..+......-.++. -++. +++.||.++ .|.++++.+++.+..
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~-i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSLP--WNNS-LLIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEEE--ETTE-EEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeEE--eCCE-EEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 47899999877655554443322222222 3455 788888653 366668888776643
No 328
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.87 E-value=1.4 Score=42.46 Aligned_cols=142 Identities=12% Similarity=0.155 Sum_probs=83.7
Q ss_pred CCcEEEEecCCCCCccceEeec-----CCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCC-C--CCccceEEec
Q 010748 331 DRSVVMKDARISTHSGFKWAVA-----ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDS-T--SQQSSFTLHA 402 (502)
Q Consensus 331 dg~i~iwd~~~~~~~~~~~~~~-----~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~-~--~~~~~~~~~~ 402 (502)
++.||..++..... ......+ ..+..+..+|+|. +++.. .+..|.+..+..+...... . .....+.+..
T Consensus 40 ~n~iR~~~i~~~~~-Yk~L~~~~~i~f~~i~qlvlSpsG~-lLAl~-g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l 116 (452)
T 3pbp_A 40 DNIIRWYNVLTDSL-YHSLNFSRHLVLDDTFHVISSTSGD-LLCLF-NDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSI 116 (452)
T ss_dssp TTEEEEEETTTCSS-CEEEECTTTCCCCTTCEEEECTTSS-EEEEE-CSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEG
T ss_pred CCEEEEEECCCCCc-ceEEecCcccccCceeEEEECCCCC-EEEEe-cCCeEEEEEecCccccCcccccccccceeEEEc
Confidence 35666666653321 1122222 2578899999876 44444 4668999988843211110 0 0011223322
Q ss_pred ------cCCCeeEEEEcCCCC--CEEEEEeCCCcEEEEECCCCCeeEE--------EEecCCCCcEEEEEEcCCCCcEEE
Q 010748 403 ------HDKAVCTISYNPLVP--NLLATGSTDKMVKLWDLSNNQPSCI--------ASRNPKAGAVFSVAFSEDSPFVLA 466 (502)
Q Consensus 403 ------h~~~v~~l~~sp~~~--~~l~t~s~dg~i~vwd~~~~~~~~~--------~~~~~~~~~v~~~~~spd~~~ll~ 466 (502)
...+|..+.|+|.+. ..|++-..|+.|++||+......+. +........|.+++|.+++- .|.
T Consensus 117 ~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~l-TLY 195 (452)
T 3pbp_A 117 DEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGL-TLY 195 (452)
T ss_dssp GGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSS-CEE
T ss_pred CCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCc-EEE
Confidence 256799999999653 4899999999999999986321122 11122235688999998664 455
Q ss_pred EEe--CCCcEEE
Q 010748 467 IGG--SKGKLEI 476 (502)
Q Consensus 467 sg~--~dg~i~v 476 (502)
... ..|.|+-
T Consensus 196 vl~~t~~GDIYA 207 (452)
T 3pbp_A 196 CLNTTEGGDIFA 207 (452)
T ss_dssp EEECTTSCEEEE
T ss_pred EEecCCCCCEEE
Confidence 544 5676654
No 329
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.71 E-value=0.51 Score=43.77 Aligned_cols=185 Identities=10% Similarity=0.078 Sum_probs=88.0
Q ss_pred CcEEEEEec----CC-------cEEEEeCCCCeeeE--eeccCCCCeEEEEEcCCCCcEEEEEeCC-------CcEEEEe
Q 010748 279 RNILASASA----DK-------QVKIWDVAAGKCNL--TLEHHTDKVQAVAWNHHSPQILLSGSFD-------RSVVMKD 338 (502)
Q Consensus 279 ~~~l~sgs~----dg-------~v~vwd~~~~~~~~--~~~~h~~~v~~l~~~~~~~~~l~s~s~d-------g~i~iwd 338 (502)
+.+++.|+. ++ .+.+||+.+.+-.. .+.........+.+ ++ .+++.|+.+ ..+.+||
T Consensus 57 ~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~yd 133 (318)
T 2woz_A 57 NQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DD-KIYVVAGKDLQTEASLDSVLCYD 133 (318)
T ss_dssp SCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TT-EEEEEEEEBTTTCCEEEEEEEEE
T ss_pred CEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CC-EEEEEcCccCCCCcccceEEEEe
Confidence 457777763 12 17788987765332 12111111222222 34 677777754 2477788
Q ss_pred cCCCCCccceEeec---CCeeEEEeCCCCCCEEEEEeC------CCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeE
Q 010748 339 ARISTHSGFKWAVA---ADVESLAWDPHAEHSFVVSLE------DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCT 409 (502)
Q Consensus 339 ~~~~~~~~~~~~~~---~~v~~v~~~~~~~~~~~~~~~------dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 409 (502)
+.+.+-... .... ....++.. +..+++.|+. -..+.+||+.+.. ...+..+........+
T Consensus 134 ~~~~~W~~~-~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-------W~~~~~~p~~r~~~~~ 202 (318)
T 2woz_A 134 PVAAKWSEV-KNLPIKVYGHNVISH---NGMIYCLGGKTDDKKCTNRVFIYNPKKGD-------WKDLAPMKTPRSMFGV 202 (318)
T ss_dssp TTTTEEEEE-CCCSSCEESCEEEEE---TTEEEEECCEESSSCBCCCEEEEETTTTE-------EEEECCCSSCCBSCEE
T ss_pred CCCCCEeEC-CCCCCcccccEEEEE---CCEEEEEcCCCCCCCccceEEEEcCCCCE-------EEECCCCCCCcccceE
Confidence 775431110 0001 11112222 2345666653 2358899987641 1111111111111122
Q ss_pred EEEcCCCCCEEEEEeCC-----CcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCC-------------
Q 010748 410 ISYNPLVPNLLATGSTD-----KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSK------------- 471 (502)
Q Consensus 410 l~~sp~~~~~l~t~s~d-----g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~d------------- 471 (502)
+.+ ++ .+++.|+.+ ..+.+||+.+.+...+............+.+ ++. +++.||.+
T Consensus 203 ~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~~~~~~~ 276 (318)
T 2woz_A 203 AIH--KG-KIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSL--AGS-LYAIGGFAMIQLESKEFAPTE 276 (318)
T ss_dssp EEE--TT-EEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEE--TTE-EEEECCBCCBC----CCBCCB
T ss_pred EEE--CC-EEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEE--CCE-EEEECCeeccCCCCceeccce
Confidence 222 23 677777653 3477899988775443333222222222222 344 67777754
Q ss_pred -CcEEEEECCCCc
Q 010748 472 -GKLEIWDTLSDA 483 (502)
Q Consensus 472 -g~i~vwd~~~~~ 483 (502)
..+.+||+.+.+
T Consensus 277 ~~~v~~yd~~~~~ 289 (318)
T 2woz_A 277 VNDIWKYEDDKKE 289 (318)
T ss_dssp CCCEEEEETTTTE
T ss_pred eeeEEEEeCCCCE
Confidence 358888987643
No 330
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.59 E-value=1.4 Score=40.63 Aligned_cols=148 Identities=10% Similarity=0.068 Sum_probs=72.2
Q ss_pred CcEEEEEecC--------CcEEEEeCCCCeeeE--eeccCCCCeEEEEEcCCCCcEEEEEeC-C-----CcEEEEecCCC
Q 010748 279 RNILASASAD--------KQVKIWDVAAGKCNL--TLEHHTDKVQAVAWNHHSPQILLSGSF-D-----RSVVMKDARIS 342 (502)
Q Consensus 279 ~~~l~sgs~d--------g~v~vwd~~~~~~~~--~~~~h~~~v~~l~~~~~~~~~l~s~s~-d-----g~i~iwd~~~~ 342 (502)
+.+++.|+.+ ..+.+||+.+.+-.. .+........++. .++ .+++.|+. + ..+.+||+.+.
T Consensus 99 ~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 99 NSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMD-LVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp TEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETT-EEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred CEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECC-EEEEEeCCCCCCcccceEEEEeCCCC
Confidence 4566677642 458999998765322 2221111122222 233 67777776 2 46888888764
Q ss_pred CCccce--EeecCCeeEEEeCCCCCCEEEEEeCCC-----cEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCC
Q 010748 343 THSGFK--WAVAADVESLAWDPHAEHSFVVSLEDG-----TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPL 415 (502)
Q Consensus 343 ~~~~~~--~~~~~~v~~v~~~~~~~~~~~~~~~dg-----~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~ 415 (502)
+-.... ........++.+ +..+++.|+.++ .+.+||+.+.. ...+..+.........+.+ +
T Consensus 176 ~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~-------W~~~~~~p~~r~~~~~~~~--~ 243 (315)
T 4asc_A 176 EWKELAPMQTARSLFGATVH---DGRIIVAAGVTDTGLTSSAEVYSITDNK-------WAPFEAFPQERSSLSLVSL--V 243 (315)
T ss_dssp EEEECCCCSSCCBSCEEEEE---TTEEEEEEEECSSSEEEEEEEEETTTTE-------EEEECCCSSCCBSCEEEEE--T
T ss_pred eEEECCCCCCchhceEEEEE---CCEEEEEeccCCCCccceEEEEECCCCe-------EEECCCCCCcccceeEEEE--C
Confidence 311100 001111222333 234677776544 48888887641 1111111111111222222 2
Q ss_pred CCCEEEEEeCCC--------------cEEEEECCCCCeeEE
Q 010748 416 VPNLLATGSTDK--------------MVKLWDLSNNQPSCI 442 (502)
Q Consensus 416 ~~~~l~t~s~dg--------------~i~vwd~~~~~~~~~ 442 (502)
+ .+++.|+.++ .+.+||+.+.+...+
T Consensus 244 ~-~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 244 G-TLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp T-EEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred C-EEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 3 6777777532 367888887765443
No 331
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.50 E-value=3 Score=43.88 Aligned_cols=190 Identities=10% Similarity=0.085 Sum_probs=110.0
Q ss_pred cceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCcc
Q 010748 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG 346 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~ 346 (502)
..|.+|.-..+ + .|..|+.+| +..||..+.+...........|.++.. .++ .|..++.+ .|..++..+.....
T Consensus 63 ~~i~~i~~d~~-g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g--~lWigt~~-Gl~~~~~~~~~~~~ 135 (758)
T 3ott_A 63 TRIYCGVIIDN-T-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGD--TLWLGALN-GLYTYQLQSRKLTS 135 (758)
T ss_dssp SCEEEEEEETT-T-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETT--EEEEEETT-EEEEEETTTCCEEE
T ss_pred ceEEEEEEcCC-C-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCC--cEEEEcCC-cceeEeCCCCeEEE
Confidence 46888877666 3 566666655 789998876543311112335777754 344 45556665 57888876644322
Q ss_pred ceE----eecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEe--c----cCCCeeEEEEcCCC
Q 010748 347 FKW----AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH--A----HDKAVCTISYNPLV 416 (502)
Q Consensus 347 ~~~----~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~--~----h~~~v~~l~~sp~~ 416 (502)
... .....|.++....++. +.+|+.. -|..|+..+.. ...+. . ....|.++...+.+
T Consensus 136 ~~~~~~~l~~~~i~~i~~d~~g~--lWigt~~-Gl~~~~~~~~~----------~~~~~~~~~~~~~~~~i~~i~~d~~~ 202 (758)
T 3ott_A 136 FDTRRNGLPNNTIYSIIRTKDNQ--IYVGTYN-GLCRYIPSNGK----------FEGIPLPVHSSQSNLFVNSLLEDTTR 202 (758)
T ss_dssp ECHHHHCCSCSCEEEEEECTTCC--EEEEETT-EEEEEETTTTE----------EEEECCCCCTTCSSCCEEEEEEETTT
T ss_pred eccCCCCcCCCeEEEEEEcCCCC--EEEEeCC-CHhhCccCCCc----------eEEecCCCccccccceeEEEEEECCC
Confidence 100 1124577887777553 5556654 47778876541 11111 1 12247888777765
Q ss_pred CCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010748 417 PNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 417 ~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~ 483 (502)
..|..|+. +-+..++..+.+......+. ...|.++...+++. |-.|+. +-|.+++..++.
T Consensus 203 -~~lWigt~-~Gl~~~~~~~~~~~~~~~l~--~~~i~~i~~d~~g~--lWigT~-~Gl~~~~~~~~~ 262 (758)
T 3ott_A 203 -QCVWIGTE-GYLFQYFPSTGQIKQTEAFH--NNSIKSLALDGNGD--LLAGTD-NGLYVYHNDTTP 262 (758)
T ss_dssp -TEEEEEEE-EEEEEEETTTTEEEEEEEEE--EEEEEEEEECTTCC--EEEEET-TEEEEECCTTSC
T ss_pred -CEEEEEEC-CCCeEEcCCCCeEEeccCCC--CCeEEEEEEcCCCC--EEEEeC-CceeEEecCCCc
Confidence 54444553 45888998776532222221 34588898888887 333454 458888876653
No 332
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.42 E-value=3.2 Score=43.67 Aligned_cols=186 Identities=11% Similarity=0.166 Sum_probs=102.5
Q ss_pred ceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeec----cCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCC
Q 010748 268 SVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLE----HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST 343 (502)
Q Consensus 268 ~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~----~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~ 343 (502)
.|.++.. .+ + .|..|+.+ -|..++..+++...... .....|.++....++ .+. .|+.. -|..++..+..
T Consensus 104 ~i~~i~~-~~-g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g-~lW-igt~~-Gl~~~~~~~~~ 176 (758)
T 3ott_A 104 DVRTMAL-QG-D-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDN-QIY-VGTYN-GLCRYIPSNGK 176 (758)
T ss_dssp CEEEEEE-ET-T-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTC-CEE-EEETT-EEEEEETTTTE
T ss_pred eEEEEEe-cC-C-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCC-CEE-EEeCC-CHhhCccCCCc
Confidence 4666654 33 3 45556655 58889987665432201 123468888888777 444 45554 47778776543
Q ss_pred CccceEe-----ecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCC
Q 010748 344 HSGFKWA-----VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPN 418 (502)
Q Consensus 344 ~~~~~~~-----~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~ 418 (502)
....... ....|.++...+.+. .+.+|+. +-|..++..+... .....+ ....|.++...+++ .
T Consensus 177 ~~~~~~~~~~~~~~~~i~~i~~d~~~~-~lWigt~-~Gl~~~~~~~~~~-------~~~~~l--~~~~i~~i~~d~~g-~ 244 (758)
T 3ott_A 177 FEGIPLPVHSSQSNLFVNSLLEDTTRQ-CVWIGTE-GYLFQYFPSTGQI-------KQTEAF--HNNSIKSLALDGNG-D 244 (758)
T ss_dssp EEEECCCCCTTCSSCCEEEEEEETTTT-EEEEEEE-EEEEEEETTTTEE-------EEEEEE--EEEEEEEEEECTTC-C
T ss_pred eEEecCCCccccccceeEEEEEECCCC-EEEEEEC-CCCeEEcCCCCeE-------EeccCC--CCCeEEEEEEcCCC-C
Confidence 2211111 112377887776544 4556664 4588888765410 111111 23457888877765 3
Q ss_pred EEEEEeCCCcEEEEECCCCCeeEEEEec-----CCCCcEEEEEEcCCCCcEEEEEeCCCcEEEE
Q 010748 419 LLATGSTDKMVKLWDLSNNQPSCIASRN-----PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIW 477 (502)
Q Consensus 419 ~l~t~s~dg~i~vwd~~~~~~~~~~~~~-----~~~~~v~~~~~spd~~~ll~sg~~dg~i~vw 477 (502)
|..|+.. -+.+++..+.+........ .....|.++....+|. |-.|+..| +.++
T Consensus 245 -lWigT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~--lWiGT~~G-l~~~ 303 (758)
T 3ott_A 245 -LLAGTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHN--IWLGTDYG-ISLS 303 (758)
T ss_dssp -EEEEETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCC--EEEEESSS-EEEE
T ss_pred -EEEEeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCC--EEEEeCCc-cccc
Confidence 4444544 5888888766532221111 1234689999888887 33455555 4443
No 333
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.15 E-value=0.89 Score=42.88 Aligned_cols=61 Identities=13% Similarity=0.043 Sum_probs=28.4
Q ss_pred cEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCC------cEEEEECCCCCeeEEEEec
Q 010748 376 TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK------MVKLWDLSNNQPSCIASRN 446 (502)
Q Consensus 376 ~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg------~i~vwd~~~~~~~~~~~~~ 446 (502)
.+.+||+.+.. ...+..+......-.++.+ ++ .+++.|+.++ .|.++++.+++......+.
T Consensus 286 ~~~~yd~~~~~-------W~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~~ 352 (357)
T 2uvk_A 286 STDIHLWHNGK-------WDKSGELSQGRAYGVSLPW--NN-SLLIIGGETAGGKAVTDSVLITVKDNKVTVQNLEH 352 (357)
T ss_dssp CCEEEECC----------CEEEEECSSCCBSSEEEEE--TT-EEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC---
T ss_pred eEEEEecCCCc-------eeeCCCCCCCcccceeEEe--CC-EEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeeccc
Confidence 47788887642 2222222222222223332 33 7788888653 3566688887754443333
No 334
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.73 E-value=0.51 Score=49.32 Aligned_cols=194 Identities=10% Similarity=0.137 Sum_probs=96.9
Q ss_pred CcEEEEEecC----CcEEEEeCCCCeeeEee-c------cCCCCeEEEEEcC-CCCcEEEEEeCCC------cEEEEecC
Q 010748 279 RNILASASAD----KQVKIWDVAAGKCNLTL-E------HHTDKVQAVAWNH-HSPQILLSGSFDR------SVVMKDAR 340 (502)
Q Consensus 279 ~~~l~sgs~d----g~v~vwd~~~~~~~~~~-~------~h~~~v~~l~~~~-~~~~~l~s~s~dg------~i~iwd~~ 340 (502)
+.+++.|+.+ ..+.+||+.+++-...- . .....-.+++..+ ++ .+++.|+.++ .+.+||+.
T Consensus 398 ~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~-~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 398 NDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNN-QLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTT-EEEEECCBSSTTCBCCCCEEEETT
T ss_pred CEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCC-EEEEEcCCCCCCCccccEEEEeCC
Confidence 4477777753 46889998877533221 1 0111112333333 45 6777777543 47788887
Q ss_pred CCCCccce-EeecCCeeEEEeCCCCCCEEEEEeCCC--cEEEEECCCCCCCCCCCCCccceE---EeccCCCeeEEEEcC
Q 010748 341 ISTHSGFK-WAVAADVESLAWDPHAEHSFVVSLEDG--TIKGFDIRTAKSDPDSTSQQSSFT---LHAHDKAVCTISYNP 414 (502)
Q Consensus 341 ~~~~~~~~-~~~~~~v~~v~~~~~~~~~~~~~~~dg--~v~i~d~~~~~~~~~~~~~~~~~~---~~~h~~~v~~l~~sp 414 (502)
+..-.... ......-.+++...+ ..+++.|+.++ .+.+||..+.. ...+.. +......-.++.+..
T Consensus 477 t~~W~~~~~~p~~R~~h~~~~~~~-~~iyv~GG~~~~~~v~~yd~~t~~-------W~~~~~~g~~p~~r~~~~a~v~~~ 548 (695)
T 2zwa_A 477 TREWSMIKSLSHTRFRHSACSLPD-GNVLILGGVTEGPAMLLYNVTEEI-------FKDVTPKDEFFQNSLVSAGLEFDP 548 (695)
T ss_dssp TTEEEECCCCSBCCBSCEEEECTT-SCEEEECCBCSSCSEEEEETTTTE-------EEECCCSSGGGGSCCBSCEEEEET
T ss_pred CCcEEECCCCCCCcccceEEEEcC-CEEEEECCCCCCCCEEEEECCCCc-------eEEccCCCCCCCcccceeEEEEeC
Confidence 64211100 001111122222223 44777776544 68999988652 011110 111122223355555
Q ss_pred CCCCEEEEEeC--C-----CcEEEEECCCCC------eeEEEEec-CCCCcEEEEEEcCCCCcEEEEEeCC--------C
Q 010748 415 LVPNLLATGST--D-----KMVKLWDLSNNQ------PSCIASRN-PKAGAVFSVAFSEDSPFVLAIGGSK--------G 472 (502)
Q Consensus 415 ~~~~~l~t~s~--d-----g~i~vwd~~~~~------~~~~~~~~-~~~~~v~~~~~spd~~~ll~sg~~d--------g 472 (502)
....+++.|+. + +.+.+||+.+.. ...+.... ...... ++....++. +++.||.+ .
T Consensus 549 ~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~-~~~~~~~~~-iyv~GG~~~~~~~~~~~ 626 (695)
T 2zwa_A 549 VSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGS-QIKYITPRK-LLIVGGTSPSGLFDRTN 626 (695)
T ss_dssp TTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSC-EEEEEETTE-EEEECCBCSSCCCCTTT
T ss_pred CCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccc-eEEEeCCCE-EEEECCccCCCCCCCCC
Confidence 42367777765 2 358899998877 33333311 111111 222333344 67778743 4
Q ss_pred cEEEEECCCCc
Q 010748 473 KLEIWDTLSDA 483 (502)
Q Consensus 473 ~i~vwd~~~~~ 483 (502)
.|.+||+.+..
T Consensus 627 ~v~~yd~~t~~ 637 (695)
T 2zwa_A 627 SIISLDPLSET 637 (695)
T ss_dssp SEEEEETTTTE
T ss_pred eEEEEECCCCe
Confidence 68999998754
No 335
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.24 E-value=0.095 Score=49.23 Aligned_cols=194 Identities=10% Similarity=0.014 Sum_probs=100.3
Q ss_pred cEEEEEecCCcEEEEeCCCCeeeEeeccC-CCCeEEEEEc--CCCCcEEEEE-eCCCcEEEEecCCCCCccceEeecCCe
Q 010748 280 NILASASADKQVKIWDVAAGKCNLTLEHH-TDKVQAVAWN--HHSPQILLSG-SFDRSVVMKDARISTHSGFKWAVAADV 355 (502)
Q Consensus 280 ~~l~sgs~dg~v~vwd~~~~~~~~~~~~h-~~~v~~l~~~--~~~~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~~~~v 355 (502)
.+++.++.||.|.-+|..+|+...++... ..++....-. +.+...++.. +.||.|..++..++... .......-+
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~-~~~~~~~lv 89 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQK-LPLSIRQLV 89 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEE-EEEEHHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEE-eeeccccce
Confidence 37899999999999999999999988653 1233221111 1121333333 58999999998765321 111111111
Q ss_pred e--EEEeC-------C---CCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccC--CC-----eeEEEEc---
Q 010748 356 E--SLAWD-------P---HAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHD--KA-----VCTISYN--- 413 (502)
Q Consensus 356 ~--~v~~~-------~---~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~--~~-----v~~l~~s--- 413 (502)
. -+... + .....+++|+.+|.+...|++++ +.++.+.... .. ..|....
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG---------~~~W~~~~~~~~~~~~~~~e~~~~~~d~~ 160 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNG---------EIISAFGPGSKNGYFGSQSVDCSPEEKIK 160 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTC---------CEEEEESTTCBCC----------------
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCC---------cEEEEEecCCCcccccccccccccccccc
Confidence 0 01110 0 01337899999999999999998 6666665321 10 1111111
Q ss_pred C-CCCCEEEEEeCCCcEEEEECCCCCeeE--EEEecCCCC--cEE-EEEEcCCCCcEEEEEeCCCcEEEEECCCCcccc
Q 010748 414 P-LVPNLLATGSTDKMVKLWDLSNNQPSC--IASRNPKAG--AVF-SVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 414 p-~~~~~l~t~s~dg~i~vwd~~~~~~~~--~~~~~~~~~--~v~-~~~~spd~~~ll~sg~~dg~i~vwd~~~~~~~~ 486 (502)
. .....|+.+..+..+.+.+ ++++... ......... .+. +-..+.++.+ +.++.+|.|.-+|..++..+-
T Consensus 161 ~d~~~~~v~ig~~~y~v~~~~-~sG~~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~--~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 161 LQECENMIVIGKTIFELGIHS-YDGASYNVTYSTWQQNVLDVPLALQNTFSKDGMC--IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp ----CCEEEEEEEEEECEECC-TTSCCCCCEEEEEECCTTTHHHHTTCSSCSSSCC--EEEETTTEEEEECSTTCCEEE
T ss_pred cccCCCeEEEecceEEEEEEC-CCCCeEEEecccccccccccccccccccccCCcE--EEECCCCEEEEEECCCCcEEE
Confidence 0 1124566666666666655 3332100 001110000 000 0001224553 346788888888888777654
No 336
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=93.95 E-value=3.8 Score=37.67 Aligned_cols=174 Identities=7% Similarity=-0.010 Sum_probs=86.1
Q ss_pred EeccCCCcEEEEEe----cCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccce
Q 010748 273 AWNKEFRNILASAS----ADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK 348 (502)
Q Consensus 273 ~~~~~~~~~l~sgs----~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 348 (502)
.|++.+. .|+-.. ....|...++... ....+..+.. ..|++.+..+..+......|.+.++....... .
T Consensus 110 ~~s~~g~-~Iy~~~~~~~~~~~Iy~~~~dGs-~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~-l 182 (302)
T 3s25_A 110 YASLIGN-YIYYLHYDTQTATSLYRIRIDGE-EKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEAL-F 182 (302)
T ss_dssp EEEEETT-EEEEEEESSSSCEEEEEEETTSC-CCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEE-E
T ss_pred EEEEeCC-EEEEEeecCCCCceEEEEECCCC-CeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEE-E
Confidence 5677744 555443 3345556666533 3344433332 34566774444454446778877776554332 1
Q ss_pred EeecCCeeEEEeCCCCCCEEEEEeCC-CcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEe--C
Q 010748 349 WAVAADVESLAWDPHAEHSFVVSLED-GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS--T 425 (502)
Q Consensus 349 ~~~~~~v~~v~~~~~~~~~~~~~~~d-g~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s--~ 425 (502)
..+... ..++|.+..++.+...+ ..|..-++... ....+. ...+ ..|+|.+ .+|+-++ .
T Consensus 183 --~~~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~----------~~~~Lt--~~~~--~~~~~~g-~~Iy~~~~~~ 244 (302)
T 3s25_A 183 --YDCNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNP----------NPVVLT--EANI--EHYNVYG-SLIFYQRGGD 244 (302)
T ss_dssp --ECSCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSC----------CCEECS--CSCE--EEEEEET-TEEEEEECSS
T ss_pred --eCCCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCC----------CeEEEe--CCCc--ceEEECC-CEEEEEECCC
Confidence 122222 33558777555554433 35555555543 122222 2223 3367777 5555543 2
Q ss_pred CCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEE
Q 010748 426 DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 478 (502)
Q Consensus 426 dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd 478 (502)
.+.|..-++.......+.. . .+..+ ++.+.++..+-...+.|..-+
T Consensus 245 ~~~i~~~~~DG~~r~~l~~--~---~~~~i--~i~~d~Iy~td~~~~~i~~~~ 290 (302)
T 3s25_A 245 NPALCVVKNDGTGFKELAK--G---EFCNI--NVTSQYVYFTDFVSNKEYCTS 290 (302)
T ss_dssp SCEEEEEETTSCCCEEEEE--S---CEEEE--EECSSEEEEEETTTCCEEEEE
T ss_pred CcEEEEEECCCCccEEeeC--C---ccceE--EEeCCEEEEEECCCCeEEEEE
Confidence 4567777776554323322 1 24333 445555555554455554444
No 337
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.88 E-value=5.8 Score=39.57 Aligned_cols=261 Identities=9% Similarity=0.101 Sum_probs=135.4
Q ss_pred EEEecCCCcEEEeeCCCCCCcCcceecCCcchh------hhhhccccCCcccccccccCcccceeeEEec---cCCCcEE
Q 010748 212 MAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEE------KKKKKSKKGKKSSIKYKKGSHTDSVLGLAWN---KEFRNIL 282 (502)
Q Consensus 212 la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~------~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~---~~~~~~l 282 (502)
+.+|+..|.|+|+-+.+++.+..+.++...... ..++..... .....-..|. ..+++. -+|+.++
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~---~~~~~gD~HH---p~~S~tdg~yDGrylf 146 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDS---AKFLNGDCHH---PHISMTDGKYDGKYLF 146 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGG---GGCCCCCCCC---CEEEEETTEEEEEEEE
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcC---CCccCCCcCC---CcccccCCeeeeEEEE
Confidence 678999999999999999888776666543322 000000000 0000001111 122332 2334334
Q ss_pred EEEecCCcEEEEeCCCCeeeEeec-cCCCCeEEEEEc--CCCCcEEEEEeC-------CCcE---------EEE---ecC
Q 010748 283 ASASADKQVKIWDVAAGKCNLTLE-HHTDKVQAVAWN--HHSPQILLSGSF-------DRSV---------VMK---DAR 340 (502)
Q Consensus 283 ~sgs~dg~v~vwd~~~~~~~~~~~-~h~~~v~~l~~~--~~~~~~l~s~s~-------dg~i---------~iw---d~~ 340 (502)
+-.-....|-.-++...++-..+. .....+.+++|- |.. .++++++. ||.. .+| |..
T Consensus 147 iNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T-~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~ 225 (638)
T 3sbq_A 147 INDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHT-KYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAE 225 (638)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBC-CEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETT
T ss_pred EecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCc-cEEEecceeeccCCCCCcccccCChhhceEEEEEcCC
Confidence 444456778888888887765553 245677888886 444 56776664 2221 111 111
Q ss_pred CCCCccceEeecCCeeEEEeCCCCCCEEEEEeCC--------------CcEEEEECCCC-------CCCCCC--------
Q 010748 341 ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLED--------------GTIKGFDIRTA-------KSDPDS-------- 391 (502)
Q Consensus 341 ~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~d--------------g~v~i~d~~~~-------~~~~~~-------- 391 (502)
+.+ +.......+....+...+++...|.++... ..+.++++... ......
T Consensus 226 tm~-v~~Qv~v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD 304 (638)
T 3sbq_A 226 TME-MAFQVIVDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLD 304 (638)
T ss_dssp TCS-EEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEE
T ss_pred ccE-EEEEEEcCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEc
Confidence 111 111112233444455566555333333211 12444443210 000000
Q ss_pred -CC----CccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCC-----------CeeEEEEecCCCCcEEEE
Q 010748 392 -TS----QQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNN-----------QPSCIASRNPKAGAVFSV 455 (502)
Q Consensus 392 -~~----~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~-----------~~~~~~~~~~~~~~v~~~ 455 (502)
.. ...+..+..-......+.++|+|..++++|-.+.++.|+|+... +-........ .-.....
T Consensus 305 ~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-GlGPlHt 383 (638)
T 3sbq_A 305 GRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-GLGPLHT 383 (638)
T ss_dssp CSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-CSCEEEE
T ss_pred cccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-CCcccEE
Confidence 00 01122222233455788999999555566667899999998741 1112333333 3446789
Q ss_pred EEcCCCCcEEEEEeCCCcEEEEECCCC
Q 010748 456 AFSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 456 ~~spd~~~ll~sg~~dg~i~vwd~~~~ 482 (502)
+|.++|. ...|---|..|.-|++...
T Consensus 384 ~Fd~~G~-aYTtlfidSqvvkWni~~a 409 (638)
T 3sbq_A 384 TFDGRGN-AYTTLFIDSQVVKWNMEEA 409 (638)
T ss_dssp EECSSSE-EEEEETTTTEEEEEEHHHH
T ss_pred EECCCCc-eEeeeeecceEEEEeccHH
Confidence 9999994 6777778999999999653
No 338
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.87 E-value=4.1 Score=39.92 Aligned_cols=110 Identities=12% Similarity=0.187 Sum_probs=58.4
Q ss_pred CCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccceEe---------ecCCeeEEEeCCC---CCCEEEEEeC----
Q 010748 310 DKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA---------VAADVESLAWDPH---AEHSFVVSLE---- 373 (502)
Q Consensus 310 ~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~---------~~~~v~~v~~~~~---~~~~~~~~~~---- 373 (502)
....+|+|.|++ +++++-...+.|++++...+.... ... ....+..|+|+|+ +..++++-+.
T Consensus 27 ~~P~~~a~~pdG-~l~V~e~~gg~I~~~~~~~g~~~~-~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 27 NKPHALLWGPDN-QIWLTERATGKILRVNPESGSVKT-VFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp SSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEE-EEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCceEEEEcCCC-cEEEEEcCCCEEEEEECCCCcEeE-EecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 456799999999 666554433468888765433211 111 1345678999995 4433333332
Q ss_pred --------CCcEEEEECCCCCCCCCCCCCccceE-Eec-cCCCeeEEEEcCCCCCEEEEEe
Q 010748 374 --------DGTIKGFDIRTAKSDPDSTSQQSSFT-LHA-HDKAVCTISYNPLVPNLLATGS 424 (502)
Q Consensus 374 --------dg~v~i~d~~~~~~~~~~~~~~~~~~-~~~-h~~~v~~l~~sp~~~~~l~t~s 424 (502)
...|.-|+........ .....+.. +.. .......|+|.|+| .+.++.+
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~--~~~~~i~~~~p~~~~H~~~~l~f~pDG-~Lyv~~G 162 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTL--EKPVDLLAGLPSSKDHQSGRLVIGPDQ-KIYYTIG 162 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEE--EEEEEEEEEECCCSSCCEEEEEECTTS-CEEEEEC
T ss_pred CCccccccccEEEEEEECCCCCCc--CCcEEEEEcCCCCCCCCCCeEeECCCC-eEEEEEC
Confidence 2356666554321000 00111221 221 12347899999998 6666544
No 339
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.86 E-value=5.3 Score=39.11 Aligned_cols=58 Identities=12% Similarity=0.097 Sum_probs=32.0
Q ss_pred CEEEEEeCCCcEEEEECCC-CCee--EEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEE
Q 010748 418 NLLATGSTDKMVKLWDLSN-NQPS--CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLE 475 (502)
Q Consensus 418 ~~l~t~s~dg~i~vwd~~~-~~~~--~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~ 475 (502)
.++++.-..+.|....+.. +... ....+....+.+..|++.|||..|+++-...|.|.
T Consensus 370 ~lfv~~~~~~~i~~v~l~~~g~~~~~~~~~~~~~~~R~~dv~~gpDG~~Lyv~~d~~G~i~ 430 (454)
T 1cru_A 370 TLLVPSLKRGVIFRIKLDPTYSTTYDDAVPMFKSNNRYRDVIASPDGNVLYVLTDTAGNVQ 430 (454)
T ss_dssp EEEEEBSSSCCEEEEEECTTSSSEEEEEEEESCCSSCEEEEEECTTSSCEEEEECSSCCEE
T ss_pred cEEEeecCCCEEEEEEECCCCCeeeeeeeeecccCCCceeEEECCCCCEEEEEECCCCCCc
Confidence 3444444456677777664 2211 11222223468999999999963344444556544
No 340
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=93.75 E-value=1.5 Score=40.49 Aligned_cols=184 Identities=14% Similarity=0.145 Sum_probs=86.1
Q ss_pred EEEEEecCCcEEEEeCCCCeeeE-eeccCCCCeEEEEEcCCCCcEEEEEeC----CC-------cEEEEecCCCCCccc-
Q 010748 281 ILASASADKQVKIWDVAAGKCNL-TLEHHTDKVQAVAWNHHSPQILLSGSF----DR-------SVVMKDARISTHSGF- 347 (502)
Q Consensus 281 ~l~sgs~dg~v~vwd~~~~~~~~-~~~~h~~~v~~l~~~~~~~~~l~s~s~----dg-------~i~iwd~~~~~~~~~- 347 (502)
+++.|+. .+.+||..+++-.. .+..............++ .+++.|+. ++ .+.+||..+.+-...
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQN-QVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSS-CEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECC-EEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 4455553 48899998876433 121111111222223344 67777873 12 167788765432110
Q ss_pred -eEeecCCeeEEEeCCCCCCEEEEEeCC-------CcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCE
Q 010748 348 -KWAVAADVESLAWDPHAEHSFVVSLED-------GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNL 419 (502)
Q Consensus 348 -~~~~~~~v~~v~~~~~~~~~~~~~~~d-------g~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~ 419 (502)
..........+.+ +..+++.|+.+ ..+.+||..+.. ...+..+...... .+++. .++ .+
T Consensus 95 ~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~-------W~~~~~~p~~r~~-~~~~~-~~~-~i 161 (318)
T 2woz_A 95 PLPSARCLFGLGEV---DDKIYVVAGKDLQTEASLDSVLCYDPVAAK-------WSEVKNLPIKVYG-HNVIS-HNG-MI 161 (318)
T ss_dssp CBSSCBCSCEEEEE---TTEEEEEEEEBTTTCCEEEEEEEEETTTTE-------EEEECCCSSCEES-CEEEE-ETT-EE
T ss_pred CCCccccccceEEE---CCEEEEEcCccCCCCcccceEEEEeCCCCC-------EeECCCCCCcccc-cEEEE-ECC-EE
Confidence 0001111222233 23466666643 247888887641 0111001100011 11222 233 66
Q ss_pred EEEEeC------CCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCC-----cEEEEECCCCc
Q 010748 420 LATGST------DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKG-----KLEIWDTLSDA 483 (502)
Q Consensus 420 l~t~s~------dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg-----~i~vwd~~~~~ 483 (502)
++.|+. -..+.+||+.+.+...+...........++.+ ++. +++.||.++ .+.+||+.+..
T Consensus 162 yv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 162 YCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGK-IVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp EEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE-EEEEEEEETTEEEEEEEEEETTTCC
T ss_pred EEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCE-EEEEcCcCCCCccceEEEEECCCCe
Confidence 666654 23589999988765444332222221222222 344 677777543 47788887654
No 341
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=93.67 E-value=4.6 Score=37.73 Aligned_cols=103 Identities=6% Similarity=0.071 Sum_probs=56.0
Q ss_pred cEEEEEecCCcEEEEeCCCCeeeEeeccCC--CC-----eEEEEEc---C-CCCcEEEEEeCCCcEEEEecCCCCCccce
Q 010748 280 NILASASADKQVKIWDVAAGKCNLTLEHHT--DK-----VQAVAWN---H-HSPQILLSGSFDRSVVMKDARISTHSGFK 348 (502)
Q Consensus 280 ~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~--~~-----v~~l~~~---~-~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 348 (502)
..+++|+.+|.+...|+.+|+.+..+.... .. ..|.... . .....++.+..+..+.+.+ +++..-...
T Consensus 112 g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~-~sG~~W~~~ 190 (339)
T 2be1_A 112 EKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS-YDGASYNVT 190 (339)
T ss_dssp EEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEEEEEEEECEECC-TTSCCCCCE
T ss_pred CEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEEecceEEEEEEC-CCCCeEEEe
Confidence 478999999999999999999999886321 10 1111111 0 1114677777777777766 333210000
Q ss_pred Ee-ecCC-ee-----EEEeCCCCCCEEEEEeCCCcEEEEECCCC
Q 010748 349 WA-VAAD-VE-----SLAWDPHAEHSFVVSLEDGTIKGFDIRTA 385 (502)
Q Consensus 349 ~~-~~~~-v~-----~v~~~~~~~~~~~~~~~dg~v~i~d~~~~ 385 (502)
.. .... +. +-..+.++ .+++++.+|.|..+|..++
T Consensus 191 ~s~~~~~~~~~~~~~~~~~s~Dg--~~~~~~~dg~v~A~d~~~G 232 (339)
T 2be1_A 191 YSTWQQNVLDVPLALQNTFSKDG--MCIAPFRDKSLLASDLDFR 232 (339)
T ss_dssp EEEEECCTTTHHHHTTCSSCSSS--CCEEEETTTEEEEECSTTC
T ss_pred cccccccccccccccccccccCC--cEEEECCCCEEEEEECCCC
Confidence 00 0000 00 00001122 3356888999999998876
No 342
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=93.66 E-value=1.1 Score=38.92 Aligned_cols=102 Identities=5% Similarity=-0.007 Sum_probs=59.6
Q ss_pred ceeeEEeccCCCcEEEEEecCCcEEEEeCCCCee------eEeec--cCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEec
Q 010748 268 SVLGLAWNKEFRNILASASADKQVKIWDVAAGKC------NLTLE--HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDA 339 (502)
Q Consensus 268 ~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~------~~~~~--~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~ 339 (502)
.+.+|+|+|+ +.+.+. .+|.+.-.+..+... -..+- +.+. ..++.|.|++ .+.++ .||.|.-++-
T Consensus 42 ~~~~laf~P~-G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G-~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 42 NFKFLFLSPG-GELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNG-YLYAV--SKDKLYKASP 114 (236)
T ss_dssp TCSEEEECTT-SCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTS-CEEEE--ETTEEEEESC
T ss_pred cceeEEECCC-ccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCC-CEEEe--CCCEEEEeCC
Confidence 6779999997 444444 677776666544221 11110 1111 4789999999 54444 5698887775
Q ss_pred CCCCCccc-----eEee--cCCeeEEEeCCCCCCEEEEEeCCCcEEE
Q 010748 340 RISTHSGF-----KWAV--AADVESLAWDPHAEHSFVVSLEDGTIKG 379 (502)
Q Consensus 340 ~~~~~~~~-----~~~~--~~~v~~v~~~~~~~~~~~~~~~dg~v~i 379 (502)
.+...... .... =..+..|.+.|++. |++.. ++.++-
T Consensus 115 P~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~--Lyav~-dg~lyr 158 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY--LYAVH-GQQFYK 158 (236)
T ss_dssp CCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC--EEEEE-TTEEEE
T ss_pred CcCCCCceeccccEeccCCCCceEEEEECCCce--EEEEe-CCcEEe
Confidence 43222211 1110 14689999999874 55555 887543
No 343
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.23 E-value=3.1 Score=43.37 Aligned_cols=65 Identities=9% Similarity=0.082 Sum_probs=39.8
Q ss_pred CcEEEEEecCC--cEEEEeCCCCeeeEe-----eccCCCCeEEEEEcCCCCcEEEEEeCC-------CcEEEEecCCCC
Q 010748 279 RNILASASADK--QVKIWDVAAGKCNLT-----LEHHTDKVQAVAWNHHSPQILLSGSFD-------RSVVMKDARIST 343 (502)
Q Consensus 279 ~~~l~sgs~dg--~v~vwd~~~~~~~~~-----~~~h~~~v~~l~~~~~~~~~l~s~s~d-------g~i~iwd~~~~~ 343 (502)
+.+++.|+.++ .+.+||+.+.+-... +........++.+......+++.|+.+ ..+.+||+.+..
T Consensus 501 ~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 501 GNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp SCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 45777787655 699999987753221 111122233455565523677777762 358889988766
No 344
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=92.84 E-value=6.4 Score=37.03 Aligned_cols=209 Identities=11% Similarity=0.035 Sum_probs=105.7
Q ss_pred cceeeEEeccCCCcEEEEEecCCcEEEEeCCCCe-eeEeec---cCCCCeEEEEEcCC---CCcEEEEEeC---C----C
Q 010748 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGK-CNLTLE---HHTDKVQAVAWNHH---SPQILLSGSF---D----R 332 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~-~~~~~~---~h~~~v~~l~~~~~---~~~~l~s~s~---d----g 332 (502)
.....|+|.|++ . |+.+...|.|++++ ..++ .+..+. ........|+++|+ +..++++-+. + +
T Consensus 29 ~~P~~ia~~pdG-~-l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLGGG-R-YLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEETT-E-EEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcCCC-e-EEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 346789999994 3 55556679999997 4554 222221 12356889999997 4244444432 3 5
Q ss_pred cEEEEecCCCC--C--ccce-Eee----cCCeeEEEeCCCCCCEEEEEeC-------------CCcEEEEECCCCCCCCC
Q 010748 333 SVVMKDARIST--H--SGFK-WAV----AADVESLAWDPHAEHSFVVSLE-------------DGTIKGFDIRTAKSDPD 390 (502)
Q Consensus 333 ~i~iwd~~~~~--~--~~~~-~~~----~~~v~~v~~~~~~~~~~~~~~~-------------dg~v~i~d~~~~~~~~~ 390 (502)
.|..|+..... . .... ... ......++|.|++. ++++.+. .|.|.-++........+
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~n 184 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADN 184 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCC
Confidence 67777765431 1 0111 111 12346789999875 4444222 24566555542100000
Q ss_pred CCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCc---EEEEECCC--------C------CeeEEEEecCCCCcEE
Q 010748 391 STSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKM---VKLWDLSN--------N------QPSCIASRNPKAGAVF 453 (502)
Q Consensus 391 ~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~---i~vwd~~~--------~------~~~~~~~~~~~~~~v~ 453 (502)
......++ ..+| .....++|+|....++++-...+. |.+..... + ....+..+........
T Consensus 185 pf~~~~i~-a~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~ 262 (354)
T 3a9g_A 185 PFPNSPIW-SYGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPS 262 (354)
T ss_dssp SSTTCCEE-EECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEE
T ss_pred CCCCCcEE-EEcc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCc
Confidence 00001111 1233 335789999943265555433221 33322111 0 0012223311224577
Q ss_pred EEEEc-------CCCCcEEEEEeCCCcEEEEECCCC
Q 010748 454 SVAFS-------EDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 454 ~~~~s-------pd~~~ll~sg~~dg~i~vwd~~~~ 482 (502)
.++|. .++. ++++.-..+.|...++...
T Consensus 263 G~~~y~g~~fp~~~G~-l~v~~~~~~~v~~~~~~~~ 297 (354)
T 3a9g_A 263 GASFVHGDMFPGLRGW-LLIACLRGSMLAAVNFGDN 297 (354)
T ss_dssp EEEECCSSSCGGGTTE-EEEEETTTTEEEEEEECGG
T ss_pred ceEEECCCCCcccCCc-EEEEEcCCCEEEEEEECCC
Confidence 88884 4565 5665556678888888753
No 345
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=92.38 E-value=7.8 Score=36.90 Aligned_cols=188 Identities=11% Similarity=0.001 Sum_probs=86.0
Q ss_pred cEEEEEecCCcEEEEeCCC-CeeeEee--ccCCCCeEEEEEcCCCCcEEEEEeCCC----cEEEEecCCCC--Cccce--
Q 010748 280 NILASASADKQVKIWDVAA-GKCNLTL--EHHTDKVQAVAWNHHSPQILLSGSFDR----SVVMKDARIST--HSGFK-- 348 (502)
Q Consensus 280 ~~l~sgs~dg~v~vwd~~~-~~~~~~~--~~h~~~v~~l~~~~~~~~~l~s~s~dg----~i~iwd~~~~~--~~~~~-- 348 (502)
..|..|...| +.+++... ++.-..+ ......|.+|.+.|..+..|.+++..| .|...+-.... .....
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~ 101 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPA 101 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCcccc
Confidence 4677777777 55554332 2221111 122457999999984334455555554 34333211111 11000
Q ss_pred Ee---------ecCCeeEEEeCCCC-CCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEe----------------c
Q 010748 349 WA---------VAADVESLAWDPHA-EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH----------------A 402 (502)
Q Consensus 349 ~~---------~~~~v~~v~~~~~~-~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~----------------~ 402 (502)
.. ....|.++++.|.+ +..+++++..+.|...+-.... ...+.... .
T Consensus 102 ~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~t-------W~~~~~~~~~p~~~~~~~~~~~g~~ 174 (394)
T 3b7f_A 102 FNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGAS-------WEPVAGFNDHPMRRAWTGGEQDGTP 174 (394)
T ss_dssp CCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESSTTSB-------CEECHHHHTCTTHHHHHCCC----C
T ss_pred CCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCC-------eEECcCccCCccccccccccccCCC
Confidence 00 11247788898743 4467777666665544322110 01110000 1
Q ss_pred cCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEE-ecC-C--------CCcEEEEEEcCCCCcEEEEEeCCC
Q 010748 403 HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS-RNP-K--------AGAVFSVAFSEDSPFVLAIGGSKG 472 (502)
Q Consensus 403 h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~-~~~-~--------~~~v~~~~~spd~~~ll~sg~~dg 472 (502)
....+.+|.+.|..+..|+.+...+.|...+-.......+.. ... + ...+.++.++|..+..|.++...+
T Consensus 175 ~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 175 DGPKMHSILVDPRDPKHLYIGMSSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEETBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred CCCceeEEEECCCCCCEEEEEECCCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence 123578899988543445555444444443222111111100 000 0 124889999997433455555444
Q ss_pred cEEE
Q 010748 473 KLEI 476 (502)
Q Consensus 473 ~i~v 476 (502)
|..
T Consensus 255 -l~~ 257 (394)
T 3b7f_A 255 -IYR 257 (394)
T ss_dssp -EEE
T ss_pred -EEE
Confidence 443
No 346
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=92.31 E-value=7.9 Score=36.83 Aligned_cols=189 Identities=12% Similarity=0.065 Sum_probs=88.9
Q ss_pred cceeeEEeccCCCcEEEEEecCC----cEEEEeCCCCeeeEeec------c--------CCCCeEEEEEcCCC-CcEEEE
Q 010748 267 DSVLGLAWNKEFRNILASASADK----QVKIWDVAAGKCNLTLE------H--------HTDKVQAVAWNHHS-PQILLS 327 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~dg----~v~vwd~~~~~~~~~~~------~--------h~~~v~~l~~~~~~-~~~l~s 327 (502)
..|.+|++.|.....|..+...| .|...+ ..++.-..+. . ....|.+|++.|.+ +..|.+
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 56999999983233455555544 344332 2232212111 0 11257789998743 355666
Q ss_pred EeCCCcEEEEecCCCC--Cccce----------------EeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCC
Q 010748 328 GSFDRSVVMKDARIST--HSGFK----------------WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDP 389 (502)
Q Consensus 328 ~s~dg~i~iwd~~~~~--~~~~~----------------~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~ 389 (502)
++..+.|...+-.... ..... ......+.+|.++|..+..++++...+.|...+-. +
T Consensus 134 g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~Dg-G---- 208 (394)
T 3b7f_A 134 GTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTDA-G---- 208 (394)
T ss_dssp EEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESST-T----
T ss_pred EecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECCC-C----
Confidence 6666655544322111 11000 00123477899988544456666555544443211 1
Q ss_pred CCCCCccceEEec-----c--------CCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCC---CcEE
Q 010748 390 DSTSQQSSFTLHA-----H--------DKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKA---GAVF 453 (502)
Q Consensus 390 ~~~~~~~~~~~~~-----h--------~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~---~~v~ 453 (502)
.....+.. + ...+.+|.+.|..+..|+.++..+ |...+-.......+ ...... ..+.
T Consensus 209 -----~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D~G~tW~~~-~~~l~~~~~~~~~ 281 (394)
T 3b7f_A 209 -----TDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDRREGVWKRI-GDAMPREVGDIGF 281 (394)
T ss_dssp -----SSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEETTTTEEECG-GGGSCTTTCSCEE
T ss_pred -----CCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCCCCCcceEC-CCCCCCCCccceE
Confidence 11111100 0 134888999987556777776554 44443222211111 100111 3467
Q ss_pred EEEEcCCCCcEEEEE
Q 010748 454 SVAFSEDSPFVLAIG 468 (502)
Q Consensus 454 ~~~~spd~~~ll~sg 468 (502)
++.++|..+..|.++
T Consensus 282 ~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 282 PIVVHQRDPRTVWVF 296 (394)
T ss_dssp EEEECSSCTTCEEEE
T ss_pred EEEECCCCCCEEEEE
Confidence 888887432234434
No 347
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=92.02 E-value=8.1 Score=36.28 Aligned_cols=60 Identities=12% Similarity=0.179 Sum_probs=34.2
Q ss_pred CCeeEEEeCCC------CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccc--eEE-eccCCCeeEEEEcCCCCCEEEE
Q 010748 353 ADVESLAWDPH------AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSS--FTL-HAHDKAVCTISYNPLVPNLLAT 422 (502)
Q Consensus 353 ~~v~~v~~~~~------~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~--~~~-~~h~~~v~~l~~sp~~~~~l~t 422 (502)
..+..+.|... ...++++....+.|...++... ... ..+ ......+..+++.|+| .++++
T Consensus 271 ~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~---------~~~~~~~~~~~~~~rp~~v~~~pdG-~lyv~ 339 (353)
T 2g8s_A 271 PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGD---------KVTEDGRILTDRGQRIRDVRTGPDG-YLYVL 339 (353)
T ss_dssp CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETT---------EEEEEEEESGGGCCCEEEEEECTTS-CEEEE
T ss_pred cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCC---------eEeeeEEcccCCCCceeEEEECCCC-cEEEE
Confidence 34566666532 1335666666777877777643 111 112 1223578899999988 55443
No 348
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=90.69 E-value=11 Score=35.30 Aligned_cols=153 Identities=13% Similarity=0.095 Sum_probs=81.8
Q ss_pred CCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccc------eEeecCCeeEEEeCCC---CCCEEEEE---eCCC
Q 010748 308 HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF------KWAVAADVESLAWDPH---AEHSFVVS---LEDG 375 (502)
Q Consensus 308 h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~------~~~~~~~v~~v~~~~~---~~~~~~~~---~~dg 375 (502)
.-.....|+|.|++ .++++--..|.|++++......... ..........|+++|+ +. .|++. ...+
T Consensus 30 gL~~P~~ia~~pdG-~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g-~lYv~yt~~~~~ 107 (347)
T 3das_A 30 GLNSPWGLAPLPGG-DLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDH-MVYAYFTSASDN 107 (347)
T ss_dssp CCSSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHC-EEEEEEECSSSE
T ss_pred CCCCceEEEEcCCC-cEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCC-EEEEEEecCCCC
Confidence 34567899999999 6665554489999998654432111 0112456789999995 33 34443 2345
Q ss_pred cEEEEECCCCCCC-CCCCCCccce-EEe-ccCCCeeEEEEcCCCCCEEEEEeC-------------CCcEEEEECCCCC-
Q 010748 376 TIKGFDIRTAKSD-PDSTSQQSSF-TLH-AHDKAVCTISYNPLVPNLLATGST-------------DKMVKLWDLSNNQ- 438 (502)
Q Consensus 376 ~v~i~d~~~~~~~-~~~~~~~~~~-~~~-~h~~~v~~l~~sp~~~~~l~t~s~-------------dg~i~vwd~~~~~- 438 (502)
.|.-|.+...... ........+. .+. ........|.|.|++ .+.++.+. -|.|.-.+....-
T Consensus 108 ~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG-~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip 186 (347)
T 3das_A 108 RIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDK-MLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPA 186 (347)
T ss_dssp EEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTS-CEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBC
T ss_pred EEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCC-CEEEEECCCCCCccccCCCCCCCEEEEEeCCCCcc
Confidence 6666666542110 0000012222 222 112235679999998 66666542 2444444543220
Q ss_pred ------eeEEEEecCCCCcEEEEEEcCCCCcEEE
Q 010748 439 ------PSCIASRNPKAGAVFSVAFSEDSPFVLA 466 (502)
Q Consensus 439 ------~~~~~~~~~~~~~v~~~~~spd~~~ll~ 466 (502)
...++. .+|.. ...++|+|++. |++
T Consensus 187 ~~nPf~~~~i~a-~G~RN-p~Gla~dp~G~-L~~ 217 (347)
T 3das_A 187 PGNPFPGSPVYS-YGHRN-VQGLAWDDKQR-LFA 217 (347)
T ss_dssp TTCSSTTCCEEE-BCCSB-CCEEEECTTCC-EEE
T ss_pred CCCCCCCCeEEe-eCCCC-cceEEECCCCC-EEE
Confidence 011222 24433 55789999887 444
No 349
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=89.65 E-value=11 Score=34.52 Aligned_cols=176 Identities=7% Similarity=0.035 Sum_probs=86.0
Q ss_pred cCCCcEEEEEe-cCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCC-------------CcEEEEecCC
Q 010748 276 KEFRNILASAS-ADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD-------------RSVVMKDARI 341 (502)
Q Consensus 276 ~~~~~~l~sgs-~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~d-------------g~i~iwd~~~ 341 (502)
.+++.+.++.. .++.|...+.. |.....+.. .. +--+++++..+..+...+ ..|+..++..
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~d-g~~~~~l~~--~~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg 97 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNID-GSNIHKLSN--DT--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG 97 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETT-SCSCEEEEE--EE--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred EeCCEEEEEeCCCCceEEEEcCC-CCCCEEccC--Cc--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence 44443444332 24556666654 333333332 11 334577774444444443 3566666665
Q ss_pred CCCccceEeecCCeeEEEeCCCCCCEEEEE---eCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCC
Q 010748 342 STHSGFKWAVAADVESLAWDPHAEHSFVVS---LEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPN 418 (502)
Q Consensus 342 ~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~---~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~ 418 (502)
..... . .... +..|++.+..++++. .....|+..++.. .....+..+.. ..+++.+..
T Consensus 98 ~~~~~--l-~~~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG----------s~~~~lt~~~~----~~~~~~g~~ 158 (302)
T 3s25_A 98 HGSTV--L-DPDP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDG----------EEKKKIKNHYL----FTCNTSDRY 158 (302)
T ss_dssp CCCEE--E-ECSC--EEEEEEETTEEEEEEESSSSCEEEEEEETTS----------CCCEEEESSCC----CCSEEETTE
T ss_pred CcceE--e-ecCC--ccEEEEeCCEEEEEeecCCCCceEEEEECCC----------CCeEEEeCCCc----eEeeEECCE
Confidence 54322 1 1122 235666666544444 2334455555543 22334443432 345677744
Q ss_pred EEEEEeCCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCC-cEEEEECCC
Q 010748 419 LLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKG-KLEIWDTLS 481 (502)
Q Consensus 419 ~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg-~i~vwd~~~ 481 (502)
+..+.....+|.+.++..+....+ .. +... ..++|++.+++.+...++ .|..-++..
T Consensus 159 iy~t~~g~~~Iy~~~l~g~~~~~l--~~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG 216 (302)
T 3s25_A 159 FYYNNPKNGQLYRYDTASQSEALF--YD---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINN 216 (302)
T ss_dssp EEEECTTTCCEEEEETTTTEEEEE--EC---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSS
T ss_pred EEEEeCCCceEEEEECCCCCEEEE--eC---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCC
Confidence 444544467788888877654333 22 2232 235688887555543332 454445543
No 350
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=89.39 E-value=24 Score=37.26 Aligned_cols=150 Identities=11% Similarity=0.128 Sum_probs=81.6
Q ss_pred ccceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccC-------CCCeEEEEEcCCCCcEEEEEeCCCc----E
Q 010748 266 TDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHH-------TDKVQAVAWNHHSPQILLSGSFDRS----V 334 (502)
Q Consensus 266 ~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h-------~~~v~~l~~~~~~~~~l~s~s~dg~----i 334 (502)
...|.+|+++|.....++.+...+.|...+ ..|+.-..+..+ ...|.+|++.|..+..++++..... -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 357999999998667788888777776665 334332223221 2469999999866555665543311 3
Q ss_pred EEEecCCCCCccceEee--------c--CCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEe---
Q 010748 335 VMKDARISTHSGFKWAV--------A--ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH--- 401 (502)
Q Consensus 335 ~iwd~~~~~~~~~~~~~--------~--~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~--- 401 (502)
.||-.......-..... . ..+..++++|..+..++++...+.| |-..... +.-..+.
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl--~~S~DgG--------~TW~~~~~~~ 162 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGI--WKSSDRA--------KTWTNVTSIP 162 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCE--EEESSTT--------SSCEEETTSC
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCE--EEECCCC--------cccCCCccCc
Confidence 33333222111000110 0 1356788888666677777644443 3222221 1111111
Q ss_pred ---ccCCCeeEEEEcCCCCCEEEEEeCC
Q 010748 402 ---AHDKAVCTISYNPLVPNLLATGSTD 426 (502)
Q Consensus 402 ---~h~~~v~~l~~sp~~~~~l~t~s~d 426 (502)
.....+..+.++|..+..++.+..+
T Consensus 163 ~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 163 DAFTNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp CCCSTTTCEEEEEECTTSTTCEEEEESS
T ss_pred cccCCCCCeEEEEECCCCCCEEEEEEcC
Confidence 1124578899988655566666654
No 351
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=88.04 E-value=15 Score=33.19 Aligned_cols=185 Identities=16% Similarity=0.137 Sum_probs=100.1
Q ss_pred ceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccc
Q 010748 268 SVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF 347 (502)
Q Consensus 268 ~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~ 347 (502)
.|..++.... +.++. . ||.|..|-....-.+..-..-...|..++..... .+.-. +|.|..|-.........
T Consensus 64 ~i~~ia~G~~--hs~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~h---s~al~-~G~v~~wG~n~~gqlg~ 135 (282)
T 3qhy_B 64 GVDAIAAGNY--HSLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAWA---SYALK-DGKVIAWGDDSDGQTTV 135 (282)
T ss_dssp CCCEEEECSS--EEEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETTE---EEEEE-TTEEEEEECCTTSTTSC
T ss_pred CEEEEEeCCC--EEEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCCE---EEEEe-CCeEEEecCCCCCcCCC
Confidence 5677776544 34544 4 8999999765432211111123467777766543 33344 99999998765433222
Q ss_pred eEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCC
Q 010748 348 KWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK 427 (502)
Q Consensus 348 ~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg 427 (502)
.......|..++.-.. ..++-. +|.|+.|-........ .+ ..-...|..|+.... ..++. .+|
T Consensus 136 ~~~~~~~i~~i~~G~~---~~~~l~-~G~v~~wG~n~~gqlg-----~p----~~~~~~v~~i~~G~~--hs~al--~~G 198 (282)
T 3qhy_B 136 PAEAQSGVTALDGGVY---TALAVK-NGGVIAWGDNYFGQTT-----VP----AEAQSGVDDVAGGIF--HSLAL--KDG 198 (282)
T ss_dssp CGGGGSSEEEEEECSS---EEEEEE-TTEEEEEECCTTSTTS-----CC----GGGGSSEEEEEECSS--EEEEE--ETT
T ss_pred CccCCCCeEEEEcccC---EEEEEE-CCEEEEecCCCCCCCC-----Cc----eecCCCeEEEEecCC--EEEEE--ECC
Confidence 2223455777766442 233334 7999999876542111 01 011345777766542 33333 599
Q ss_pred cEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010748 428 MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 428 ~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~~ 483 (502)
.|+.|=........+ . ......|..++..... .++.. +|.|..|=.....
T Consensus 199 ~v~~wG~n~~gqlg~-p-~~~~~~v~~i~~G~~h--~~al~--~g~v~~wG~n~~g 248 (282)
T 3qhy_B 199 KVIAWGDNRYKQTTV-P-TEALSGVSAIASGEWY--SLALK--NGKVIAWGSSRTA 248 (282)
T ss_dssp EEEEEECCTTSTTCC-C-GGGGSSCCEEEECSSC--EEEEE--TTEEEEESTTCCC
T ss_pred eEEEEECCCCCCCCC-C-cccCCCceEEEcCCCE--EEEEE--CCEEEEecCCCCc
Confidence 999997654321110 0 0112346666665544 24433 8899999765543
No 352
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=87.34 E-value=6 Score=39.44 Aligned_cols=103 Identities=10% Similarity=-0.025 Sum_probs=67.8
Q ss_pred cEEEEecCC----CCCccceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCC--C-CCCccceEEeccCC
Q 010748 333 SVVMKDARI----STHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPD--S-TSQQSSFTLHAHDK 405 (502)
Q Consensus 333 ~i~iwd~~~----~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~--~-~~~~~~~~~~~h~~ 405 (502)
.+.+.|.+. ................+..+|+|.++++.|-.+.++.++|+++...... . .....+.....-.-
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 467777776 3334445567777888999999998777888899999999985311000 0 00111111112234
Q ss_pred CeeEEEEcCCCCCEEEEEeCCCcEEEEECCC
Q 010748 406 AVCTISYNPLVPNLLATGSTDKMVKLWDLSN 436 (502)
Q Consensus 406 ~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~ 436 (502)
.....+|.+.| +...|.-.|..|.-|++..
T Consensus 379 GPlHt~Fd~~G-~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 379 GPLHTTFDGRG-NAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp CEEEEEECSSS-EEEEEETTTTEEEEEEHHH
T ss_pred cccEEEECCCC-ceEeeeeecceEEEEeccH
Confidence 56778899987 6666667899999999864
No 353
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=86.17 E-value=35 Score=35.60 Aligned_cols=106 Identities=15% Similarity=0.122 Sum_probs=61.7
Q ss_pred ceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccC-------CCCeEEEEEcCCCCcEEEEEeCC-------Cc
Q 010748 268 SVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHH-------TDKVQAVAWNHHSPQILLSGSFD-------RS 333 (502)
Q Consensus 268 ~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h-------~~~v~~l~~~~~~~~~l~s~s~d-------g~ 333 (502)
.|..|+++|.....++.+...+.|..++ ..++.-..+..+ ...|.+|+++|..+..++++... +.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~-D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWD-PSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEE-TTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeC-CCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCC
Confidence 7999999998666777777667776665 233332223221 24589999999665556555421 12
Q ss_pred EEEEecCCCCCccceEeec----------CCeeEEEeCCCCCCEEEEEeCC
Q 010748 334 VVMKDARISTHSGFKWAVA----------ADVESLAWDPHAEHSFVVSLED 374 (502)
Q Consensus 334 i~iwd~~~~~~~~~~~~~~----------~~v~~v~~~~~~~~~~~~~~~d 374 (502)
..||........-...... ..+.+++++|..+..++++...
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~ 153 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC 153 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST
T ss_pred ccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc
Confidence 4455443322111111110 1246799999877778887744
No 354
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=84.87 E-value=0.31 Score=46.74 Aligned_cols=15 Identities=20% Similarity=0.333 Sum_probs=7.1
Q ss_pred HHHHHHHhccccccc
Q 010748 26 EEIEEIINSGALEHE 40 (502)
Q Consensus 26 ~~~~~~~~~~~~~~~ 40 (502)
+.+.+++.+....++
T Consensus 323 ~~l~~~l~~~~~~~l 337 (386)
T 2ca6_A 323 DEIREVFSTRGRGEL 337 (386)
T ss_dssp HHHHHHHHHHTCCEE
T ss_pred HHHHHHhhhcCcchh
Confidence 445555555444443
No 355
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=84.59 E-value=31 Score=33.64 Aligned_cols=74 Identities=8% Similarity=-0.066 Sum_probs=36.8
Q ss_pred ccceEEeccC-CCeeEEEEcCCC-----CCEEEEEeCCCcEEEEECCCCCee-EEEEe---------cCCCCcEEEEEEc
Q 010748 395 QSSFTLHAHD-KAVCTISYNPLV-----PNLLATGSTDKMVKLWDLSNNQPS-CIASR---------NPKAGAVFSVAFS 458 (502)
Q Consensus 395 ~~~~~~~~h~-~~v~~l~~sp~~-----~~~l~t~s~dg~i~vwd~~~~~~~-~~~~~---------~~~~~~v~~~~~s 458 (502)
.++..+..|. ..++.+.|-... ...++.+...+.|....+...... ....+ ....+.+..+.+.
T Consensus 265 ~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~g~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~r~~~v~~~ 344 (463)
T 2wg3_C 265 PSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRNGNFLTLQQSPVTKQWQEKPLCLGTSGSCRGYFSGHILGFGED 344 (463)
T ss_dssp CCCEECCC----CEEEEEECCCSSCTTTTTCEEEEETTSCEEEEEC-----CCEEEEECEEETTSSCSCCCSEEEEEEEC
T ss_pred CCeEEeeCCCCccccceEEEeCCCChhhcceEEEecCCCcEEEEEeCCCCceeeEEEeecCCcccccccccCcceEEEEC
Confidence 4555555442 567888875421 112444555577666665443211 11111 1124679999999
Q ss_pred CCCCcEEEEEe
Q 010748 459 EDSPFVLAIGG 469 (502)
Q Consensus 459 pd~~~ll~sg~ 469 (502)
|+|. |+++..
T Consensus 345 pdG~-Lyv~~~ 354 (463)
T 2wg3_C 345 ELGE-VYILSS 354 (463)
T ss_dssp TTCC-EEEEEE
T ss_pred CCCC-EEEEec
Confidence 9998 455443
No 356
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=84.53 E-value=28 Score=32.96 Aligned_cols=170 Identities=6% Similarity=0.093 Sum_probs=95.2
Q ss_pred cEEEEeCCCC--eeeEeecc------CCCCeEEEEEc---CC---CCcEEEEE-eCCCcEEEEecCCCCCccce------
Q 010748 290 QVKIWDVAAG--KCNLTLEH------HTDKVQAVAWN---HH---SPQILLSG-SFDRSVVMKDARISTHSGFK------ 348 (502)
Q Consensus 290 ~v~vwd~~~~--~~~~~~~~------h~~~v~~l~~~---~~---~~~~l~s~-s~dg~i~iwd~~~~~~~~~~------ 348 (502)
.|.+||+.+. +.++++.- ..+.+..+.+. |. +..+++.+ +..+.|.++|+.+++.-...
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 5778888888 87777642 13457777777 22 11344444 35678999999876532211
Q ss_pred ------------EeecCCeeEEEeCCC----CCCEEEEEeCCC-cEEEEE---CCCCCCCCCCCCCccceEEeccC---C
Q 010748 349 ------------WAVAADVESLAWDPH----AEHSFVVSLEDG-TIKGFD---IRTAKSDPDSTSQQSSFTLHAHD---K 405 (502)
Q Consensus 349 ------------~~~~~~v~~v~~~~~----~~~~~~~~~~dg-~v~i~d---~~~~~~~~~~~~~~~~~~~~~h~---~ 405 (502)
+.....+..++++|+ +. .++-+...+ .++-.. ++.... ...+..+ +.. .
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~-~LYf~plss~~ly~V~T~~L~~~~~------~~~v~~~-G~kg~~s 275 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNR-PAYYLAGSAIKVYSVNTKELKQKGG------KLNPELL-GNRGKYN 275 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCC-EEEEEESSCSEEEEEEHHHHSSTTC------CCCCEEE-EECCTTC
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCe-EEEEEECCCCcEEEEEHHHhhCcch------hhceEEe-eecCCCC
Confidence 111346788888886 44 444444333 344333 222210 1222222 222 3
Q ss_pred CeeEEEEc-CCCCCEEEEEeCCCcEEEEECCC-C---CeeEEEEecCCCCcEEEEEEcCCCCcEEEEEe
Q 010748 406 AVCTISYN-PLVPNLLATGSTDKMVKLWDLSN-N---QPSCIASRNPKAGAVFSVAFSEDSPFVLAIGG 469 (502)
Q Consensus 406 ~v~~l~~s-p~~~~~l~t~s~dg~i~vwd~~~-~---~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~ 469 (502)
....+++. .+| .++++--..+.|..|+..+ . ....+.........+..+.+.+++. |.+..+
T Consensus 276 ~~~~~~~D~~~G-~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~-Lwv~sn 342 (381)
T 3q6k_A 276 DAIALAYDPKTK-VIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGG-LWFMSN 342 (381)
T ss_dssp CEEEEEECTTTC-EEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSC-EEEEEC
T ss_pred CcceEEEeCCCC-eEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCe-EEEEEC
Confidence 34456675 455 7777777888999999876 1 1112223333556788888888775 455443
No 357
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=82.40 E-value=50 Score=34.29 Aligned_cols=185 Identities=14% Similarity=0.143 Sum_probs=90.7
Q ss_pred CcEEEEeCCCCe--eeEeeccCCCCe-EEEEEcCCCCc----EEEEEeCC---CcEEEEecCCCCCccceEeecCCeeEE
Q 010748 289 KQVKIWDVAAGK--CNLTLEHHTDKV-QAVAWNHHSPQ----ILLSGSFD---RSVVMKDARISTHSGFKWAVAADVESL 358 (502)
Q Consensus 289 g~v~vwd~~~~~--~~~~~~~h~~~v-~~l~~~~~~~~----~l~s~s~d---g~i~iwd~~~~~~~~~~~~~~~~v~~v 358 (502)
..|+.|.+-+.. -...+.+....+ .+...++++.. .+++.+.+ ..+.+.+...+.............. +
T Consensus 216 ~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~ 294 (711)
T 4hvt_A 216 NSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPSDAT-L 294 (711)
T ss_dssp CEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCTTCE-E
T ss_pred CEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCCcce-E
Confidence 568899887652 223343323332 23445556532 35544422 4455656553222111111122211 2
Q ss_pred EeCCCCCCEEEEE----------eCCCcEEEEECCCCCCCCCCCCCccceEEec--cCCCeeEEEEcCCCCCEEEEEeCC
Q 010748 359 AWDPHAEHSFVVS----------LEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA--HDKAVCTISYNPLVPNLLATGSTD 426 (502)
Q Consensus 359 ~~~~~~~~~~~~~----------~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~sp~~~~~l~t~s~d 426 (502)
..+..+ .+++.. ...+.|...++.+....... ......+.. ....+..+.+..+ .++++...+
T Consensus 295 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~--~l~~~~~~~ 369 (711)
T 4hvt_A 295 QGSFKE-YVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESD--KTSLKILFTPTANEVFNFISTTKD--RVFLATYDN 369 (711)
T ss_dssp EEEETT-EEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGG--CTTCEEEECCCTTEEEEEEEECSS--CEEEEEEET
T ss_pred eeeECC-EEEEEECcccccccccCCCCeEEEEECCcccccccc--cccceEEECCCCCCeEEEEEEECC--EEEEEEEEC
Confidence 233322 233322 24677888888764100000 011222222 3346778888864 677777777
Q ss_pred Cc--EEEEECCCCC--eeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCC---CcEEEEECC
Q 010748 427 KM--VKLWDLSNNQ--PSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSK---GKLEIWDTL 480 (502)
Q Consensus 427 g~--i~vwd~~~~~--~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~d---g~i~vwd~~ 480 (502)
+. |.++++.++. ...+..+.. .+.+..+.+++++..++++.++. +.+..+|+.
T Consensus 370 ~~~~l~~~~~~~g~~~~~~~i~lp~-~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 370 VVAKVVTFTLENEQWTKPVVLKLPY-QNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp TEEEEEEECEETTEECCCEEECCCS-TTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred CEEEEEEEECCCCceEEEeccCCCC-CeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 75 6667765553 111122332 35677777778876666655443 567778775
No 358
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=81.99 E-value=26 Score=36.93 Aligned_cols=154 Identities=12% Similarity=0.016 Sum_probs=77.6
Q ss_pred CCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCC--CccceEe----ecCCeeEEEeCCCCCCEEEEEeCCCc----EE
Q 010748 309 TDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST--HSGFKWA----VAADVESLAWDPHAEHSFVVSLEDGT----IK 378 (502)
Q Consensus 309 ~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~--~~~~~~~----~~~~v~~v~~~~~~~~~~~~~~~dg~----v~ 378 (502)
...|.+|.++|..+..+++++..+.|...+=.... .+..... ....+.+++++|..+..++++..... -.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~ 93 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAA 93 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccE
Confidence 46899999999877788888887776554321110 0000000 12468999999865556666553311 23
Q ss_pred EEECCCCCCCCCCCCCccceEEec---------cCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEE-ec--
Q 010748 379 GFDIRTAKSDPDSTSQQSSFTLHA---------HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS-RN-- 446 (502)
Q Consensus 379 i~d~~~~~~~~~~~~~~~~~~~~~---------h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~-~~-- 446 (502)
||-..... ..-..+.. ....+..++++|..+..++.+...+.|.. ....++.-.... ..
T Consensus 94 v~~S~DgG--------~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~-S~DgG~TW~~~~~~~~~ 164 (789)
T 1sqj_A 94 FYVSEDRG--------QSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAKTWTNVTSIPDA 164 (789)
T ss_dssp EEEESSTT--------SEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEE-ESSTTSSCEEETTSCCC
T ss_pred EEEECCCC--------CcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEE-ECCCCcccCCCccCccc
Confidence 33333221 11111110 01135678888865566777664443321 222222111111 11
Q ss_pred -CCCCcEEEEEEcCCCCcEEEEEeCC
Q 010748 447 -PKAGAVFSVAFSEDSPFVLAIGGSK 471 (502)
Q Consensus 447 -~~~~~v~~~~~spd~~~ll~sg~~d 471 (502)
.....+..+.++|.....|.++..+
T Consensus 165 ~~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 165 FTNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp CSTTTCEEEEEECTTSTTCEEEEESS
T ss_pred cCCCCCeEEEEECCCCCCEEEEEEcC
Confidence 1124578899988543234445443
No 359
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=80.07 E-value=46 Score=32.43 Aligned_cols=113 Identities=11% Similarity=0.134 Sum_probs=61.8
Q ss_pred CCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEe---------ccCCCeeEEEEcCC---CCCEE
Q 010748 353 ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH---------AHDKAVCTISYNPL---VPNLL 420 (502)
Q Consensus 353 ~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~---------~h~~~v~~l~~sp~---~~~~l 420 (502)
.....|+|.|++...++++...|.|++++...... ..++..+. .....+..|+|+|+ .+.+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~------~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lY 87 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIF------KEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLY 87 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBC------SSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEE
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCee------eeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEE
Confidence 45678999998753466667889999997532210 01111111 12457889999995 21344
Q ss_pred EEEeC--C----------CcEEEEECCCC--------CeeEEEEec--CCCCcEEEEEEcCCCCcEEEEEeCCC
Q 010748 421 ATGST--D----------KMVKLWDLSNN--------QPSCIASRN--PKAGAVFSVAFSEDSPFVLAIGGSKG 472 (502)
Q Consensus 421 ~t~s~--d----------g~i~vwd~~~~--------~~~~~~~~~--~~~~~v~~~~~spd~~~ll~sg~~dg 472 (502)
++-+. + ..|.-|.+... ....+.... .....-..|.|.|||. |+++.|..+
T Consensus 88 v~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~-LYv~~Gd~~ 160 (463)
T 2wg3_C 88 VSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF-LYIILGDGM 160 (463)
T ss_dssp EEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC-EEEEECCTT
T ss_pred EEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc-EEEEeCCCC
Confidence 43332 1 13444655421 112232222 2223467899999997 666665543
No 360
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=79.81 E-value=18 Score=39.03 Aligned_cols=39 Identities=23% Similarity=0.490 Sum_probs=32.6
Q ss_pred cceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeec
Q 010748 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLE 306 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~ 306 (502)
..+.+++..++ ..++++-+.|+++|+|++.+++++.+..
T Consensus 236 ~~~~~~~~~~~-~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 236 NTIISMIFLST-YNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TCEEEEEEETT-TTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEEeecCC-CcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 45677777776 5689999999999999999999988753
No 361
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=77.34 E-value=61 Score=32.30 Aligned_cols=180 Identities=14% Similarity=0.209 Sum_probs=96.7
Q ss_pred CcccceeeEEeccCCCcEEEEEecCCc----------------------------EEEEeCCCCeeeEeeccC--CCC--
Q 010748 264 SHTDSVLGLAWNKEFRNILASASADKQ----------------------------VKIWDVAAGKCNLTLEHH--TDK-- 311 (502)
Q Consensus 264 ~h~~~V~~l~~~~~~~~~l~sgs~dg~----------------------------v~vwd~~~~~~~~~~~~h--~~~-- 311 (502)
.|-..+....|..+|..-++....+|+ |.|+|=.+|+.+.++... ...
T Consensus 176 a~yt~~~V~DlDGDGkaEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~GpEyL~vfdG~TG~~l~~~~~~p~rg~~~ 255 (591)
T 2zux_A 176 AHYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSGPEYLTVFQGSTGKELVTANFEPARGNVS 255 (591)
T ss_dssp TTSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSSCCEEEEEETTTCCEEEEEECSSCCCCGG
T ss_pred cccCceeEEEcCCCCcceEEEEccCCcccCCceEecccccccccccceeecCCcEEEEEeCCCCCEEecccCCCCCCccc
Confidence 366778888888888778888877776 778887788777665321 111
Q ss_pred -------------eEEEEEcC-CCCcEEEEEeC--CCcEEEEecCCCCCccceEeec--------------CCeeEEEeC
Q 010748 312 -------------VQAVAWNH-HSPQILLSGSF--DRSVVMKDARISTHSGFKWAVA--------------ADVESLAWD 361 (502)
Q Consensus 312 -------------v~~l~~~~-~~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~--------------~~v~~v~~~ 361 (502)
..++++.. +.+.++++-+. -..|..||.+..+... .|... ..+....+.
T Consensus 256 ~WGD~ygnR~drf~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~-~W~~d~~~~~~~~~~gqg~h~~~vaDVD 334 (591)
T 2zux_A 256 DWGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSK-LWTLDSSKSGNEAFAGQGNHNLSIADVD 334 (591)
T ss_dssp GGTCSSSSGGGCEEEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEE-EEEEETTSTTCGGGSSCCCSCCEEECCS
T ss_pred ccccccccccccceeeEEECCCCCceEEEeccccceeEEEEEECCCCceEE-EEEecCCCCCcccccccCCCCCeeEeCC
Confidence 22333321 12222222211 1247778876654422 33221 123334445
Q ss_pred CCCCCEEEEEe----CCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCC-CEEEEEeCCC----cEEEE
Q 010748 362 PHAEHSFVVSL----EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP-NLLATGSTDK----MVKLW 432 (502)
Q Consensus 362 ~~~~~~~~~~~----~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~-~~l~t~s~dg----~i~vw 432 (502)
-+|..-++.|+ .||++ +|... .+|...+....|.|+.+ .-++.+..++ -..+.
T Consensus 335 gDG~dEIv~Gs~~iD~dG~~-L~st~-----------------~gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~ 396 (591)
T 2zux_A 335 GDGKDEIIFGSMAVDHDGKG-MYSTG-----------------LGHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFR 396 (591)
T ss_dssp SSSSCEEEETTEEECTTSCE-EEECS-----------------CCCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEE
T ss_pred CCCCceEEEeeeEECCCCCE-eeeCC-----------------CCCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEE
Confidence 55554455443 23332 23221 26777778888888753 3344444431 35568
Q ss_pred ECCCCCeeEEEEecCCCCcEEEEEEcCCCC
Q 010748 433 DLSNNQPSCIASRNPKAGAVFSVAFSEDSP 462 (502)
Q Consensus 433 d~~~~~~~~~~~~~~~~~~v~~~~~spd~~ 462 (502)
|..+++..-......+.+......|.|+.+
T Consensus 397 dA~tG~vlw~~~~~~d~Gr~~~~Didp~~p 426 (591)
T 2zux_A 397 DAATGKILWGVYAGKDVGRGMAADIDPRYP 426 (591)
T ss_dssp ETTTCCEEEEECCSSCCCCEEEECCCTTSS
T ss_pred ECCCCcEEEEcCCCCCCCceeEEecCCCCC
Confidence 888887422222233456666666777654
No 362
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=73.51 E-value=93 Score=32.55 Aligned_cols=139 Identities=8% Similarity=-0.051 Sum_probs=66.7
Q ss_pred cEEEEEecCCcEEEEeCCCCeeeEee-ccCCCCeEEEEEcCCCC-cEEEEEeCC---------CcEEEEecCCCCCccce
Q 010748 280 NILASASADKQVKIWDVAAGKCNLTL-EHHTDKVQAVAWNHHSP-QILLSGSFD---------RSVVMKDARISTHSGFK 348 (502)
Q Consensus 280 ~~l~sgs~dg~v~vwd~~~~~~~~~~-~~h~~~v~~l~~~~~~~-~~l~s~s~d---------g~i~iwd~~~~~~~~~~ 348 (502)
..|+++..|.-...|+-...... .+ ...-..+..+.|++..+ .++.++..| +.|.+-+ ..+..-...
T Consensus 457 ~~l~~~~~d~gg~~~~~~~~~~~-~~~~~~~~~~~~i~~a~~~~~~~~~vG~~d~~~~~~~~~g~i~~S~-DgG~tW~~~ 534 (763)
T 3a0f_A 457 AHLFSGMYDLGGMRHDDFSVPQP-MYSKPTFSSTDGLDFAGRAANVLARVGRNDHPDAGVAGCTQGAYTT-NSGDSWTLF 534 (763)
T ss_dssp CSCEEEETTTBCBBCSCTTSCCC-BCCSSCCSEEEEEEEETTEEEEEEEEEECSSCCTTCCSCTTEEEES-STTSSCEEC
T ss_pred ceeEEEEccCCceEecCCccCCc-cccCCccccccceEeccCCCcEEEEEeCCCcccccccCCCcEEEEC-CCCcCCccC
Confidence 45667666544444543221111 11 11123467889988764 455666664 6665432 121111100
Q ss_pred E-ee----cCCeeEEEeCCCCCCEEEEEeC--CCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEE
Q 010748 349 W-AV----AADVESLAWDPHAEHSFVVSLE--DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLA 421 (502)
Q Consensus 349 ~-~~----~~~v~~v~~~~~~~~~~~~~~~--dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~ 421 (502)
. .. ...+..+++++++...+++++. ++.| |-....... ...+ .........+..+|..+..++
T Consensus 535 ~~~~~g~~~~~~~~i~v~~~~~~~~~~~~~~~~~~v--~~S~D~G~t-----W~~~---~~l~~~~~~i~~d~~~~~~~y 604 (763)
T 3a0f_A 535 QTCVPSLEVGNGGTIAVGADGKTFVWSPSKADGKGP--YTSSDYGKT-----WTAP---SGLSKQTTGIAADRVQANTFY 604 (763)
T ss_dssp SSCCTTCBTTBCCEEEECTTSSCEEEECSSCCSSCC--EEESSTTSC-----CBCC---BSCCCCCSCEEECSSSTTCEE
T ss_pred CCCCcccccCCcceEEEecCCCcEEEEecccCCCce--EEeCCCCCC-----Ceec---CCCCCCcceEEEeccCCCEEE
Confidence 0 01 2346778888887777777763 4333 322222111 1111 111222356777886667777
Q ss_pred EEeCCCcEEE
Q 010748 422 TGSTDKMVKL 431 (502)
Q Consensus 422 t~s~dg~i~v 431 (502)
.+. ++.|.+
T Consensus 605 ~g~-~g~v~~ 613 (763)
T 3a0f_A 605 VYV-EGDFFV 613 (763)
T ss_dssp EEE-TTEEEE
T ss_pred EEc-CCCEEE
Confidence 774 565543
No 363
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=71.62 E-value=68 Score=33.40 Aligned_cols=109 Identities=11% Similarity=0.016 Sum_probs=60.1
Q ss_pred CCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCccce--Ee----ecCCeeEEEeCCCCCCEEEEEeCCC-------c
Q 010748 310 DKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK--WA----VAADVESLAWDPHAEHSFVVSLEDG-------T 376 (502)
Q Consensus 310 ~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~--~~----~~~~v~~v~~~~~~~~~~~~~~~dg-------~ 376 (502)
+.|..|.++|.++..++++...+.|...+-....-.... .. ....+.+++++|..+..++++.... .
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCC
Confidence 379999999987777888876676655542211100000 00 1245889999996655666664321 2
Q ss_pred EEEEECCCCCCCCCCCCCccceEEec-c--------CCCeeEEEEcCCCCCEEEEEeCC
Q 010748 377 IKGFDIRTAKSDPDSTSQQSSFTLHA-H--------DKAVCTISYNPLVPNLLATGSTD 426 (502)
Q Consensus 377 v~i~d~~~~~~~~~~~~~~~~~~~~~-h--------~~~v~~l~~sp~~~~~l~t~s~d 426 (502)
..+|-..... +....+.. . ...+.+|+++|..+..|+.+...
T Consensus 103 ~~l~~S~DgG--------~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~ 153 (737)
T 2cn3_A 103 GAILRSTDRG--------ETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC 153 (737)
T ss_dssp CEEEEESSSS--------SSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST
T ss_pred ccEEEeCCCC--------CCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc
Confidence 3455444331 11111111 1 11246899999776777777643
No 364
>4b1v_M Phosphatase and actin regulator 1; structural protein, nucleotide-binding, transcription regula transcription, muscle protein, ATP-binding; HET: ATP LAB; 1.75A {Mus musculus}
Probab=67.26 E-value=1.7 Score=23.57 Aligned_cols=12 Identities=17% Similarity=0.418 Sum_probs=8.8
Q ss_pred eccCCCCCcCCc
Q 010748 7 WVPKGASKAVPE 18 (502)
Q Consensus 7 ~~~~g~~~~~~~ 18 (502)
-|+||+.|+.|+
T Consensus 21 likrgvlke~~~ 32 (32)
T 4b1v_M 21 LIKRGVLKEIYD 32 (32)
T ss_dssp HHHTTSCCCC--
T ss_pred HHHhhhhhhcCC
Confidence 378999999986
No 365
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=65.52 E-value=1.4e+02 Score=31.29 Aligned_cols=156 Identities=13% Similarity=0.049 Sum_probs=80.8
Q ss_pred CcccceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeecc------------CCCCeEEEEEcCCCCcEEEEEeCC
Q 010748 264 SHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEH------------HTDKVQAVAWNHHSPQILLSGSFD 331 (502)
Q Consensus 264 ~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~------------h~~~v~~l~~~~~~~~~l~s~s~d 331 (502)
+-...|.+|.++|.+...++.+...|.|.... ..|+.-..+.. ....|.+|+++|..+..++++...
T Consensus 18 g~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~-DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~ 96 (763)
T 3a0f_A 18 SGGGFISGLVAHPTEKDLIYARTDIGGTYRWN-AAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGD 96 (763)
T ss_dssp CBCSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECS
T ss_pred cCCCceeEEEeCCCCCCEEEEEeccCcEEEEC-CCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecc
Confidence 34568999999998777888887777665554 23332222211 224589999998655555554431
Q ss_pred -----CcEEEEecCC-CCCccceE-ee------cCC--eeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCcc
Q 010748 332 -----RSVVMKDARI-STHSGFKW-AV------AAD--VESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQS 396 (502)
Q Consensus 332 -----g~i~iwd~~~-~~~~~~~~-~~------~~~--v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~ 396 (502)
....||-... ++.-.... .. .+. ...++++|..+..++++...+.|. -........ ..
T Consensus 97 ~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l~--~S~DgG~TW-----~~ 169 (763)
T 3a0f_A 97 YVQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQGLW--RSTDRAQTW-----SR 169 (763)
T ss_dssp CTTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSCEE--EESSTTSSC-----EE
T ss_pred cccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCcEE--EECCCCcCc-----cc
Confidence 1233443322 22111111 00 111 146888887666677776654433 222221111 11
Q ss_pred ceEEe---ccCCCeeEEEEcCCCCCEEEEEeCCC
Q 010748 397 SFTLH---AHDKAVCTISYNPLVPNLLATGSTDK 427 (502)
Q Consensus 397 ~~~~~---~h~~~v~~l~~sp~~~~~l~t~s~dg 427 (502)
+..+. .....+..|.++|..+..++.+..++
T Consensus 170 ~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 170 MNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp CTTSCCCSCTTTCEEEEEECSSSTTCEEEEESST
T ss_pred cccCcccCCCccceEEEEECCCCCCEEEEEEeCC
Confidence 11011 11234778899887655566666654
No 366
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=64.39 E-value=12 Score=41.35 Aligned_cols=39 Identities=23% Similarity=0.490 Sum_probs=31.6
Q ss_pred cceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeec
Q 010748 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLE 306 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~ 306 (502)
..+.+++..++ ..++++-+.|+++|||++.+++++.+..
T Consensus 238 ~~~vs~~~~~~-~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 238 NTIISMIFLST-YNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp TCBSCCEEETT-TTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred ceeEEeeccCC-ccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 35556666666 5689999999999999999999988763
No 367
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=60.91 E-value=92 Score=27.79 Aligned_cols=209 Identities=12% Similarity=0.006 Sum_probs=112.9
Q ss_pred cceeeEEeccCCCcEEEEEecCCcEEE---EeCCCCeeeEeeccCCCCeEEEEEcCC-CCcEEEEEeCCCcEEEEecCCC
Q 010748 267 DSVLGLAWNKEFRNILASASADKQVKI---WDVAAGKCNLTLEHHTDKVQAVAWNHH-SPQILLSGSFDRSVVMKDARIS 342 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~dg~v~v---wd~~~~~~~~~~~~h~~~v~~l~~~~~-~~~~l~s~s~dg~i~iwd~~~~ 342 (502)
+.+..+.-..... .|+.-+..|.++- |++..++....+. ....|..+.. ++ ...+++..+..|.++...+...
T Consensus 24 D~~~~~~~~~t~~-~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~ 100 (276)
T 3no0_A 24 APVVNILRVPFTE-GLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEF 100 (276)
T ss_dssp CCEEEEEEEETTS-CEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGT
T ss_pred CeEEEEEEECCCC-EEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHh
Confidence 4555555444423 5555666777654 3433222111133 3566776644 32 2368999999999999887553
Q ss_pred C-----CccceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCC
Q 010748 343 T-----HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP 417 (502)
Q Consensus 343 ~-----~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~ 417 (502)
. ...........+..+..... ...++..+..|.+..+...................+.. ...|.++...+..
T Consensus 101 ~~~~~G~~~i~lkegD~l~~~~~~~~-~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~~- 177 (276)
T 3no0_A 101 EYKAQGMPIIKLTEGDEVVSIASSVD-ETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEK-NDETSGLRIWNGE- 177 (276)
T ss_dssp TTCSTTEECSCCCTTCCEEEEEECCS-SCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEESSC-
T ss_pred hhhcCCeEEEecCCCCEEEEEEEeCC-CCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCC-CCEEEEEEEeCCC-
Confidence 2 11111222345666555543 34688888999998887654322111101122222332 2445555444444
Q ss_pred CEEEEEeCCCcEEEEECCCCCe-----eEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEE--EECCCCc
Q 010748 418 NLLATGSTDKMVKLWDLSNNQP-----SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEI--WDTLSDA 483 (502)
Q Consensus 418 ~~l~t~s~dg~i~vwd~~~~~~-----~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~v--wd~~~~~ 483 (502)
..++..+..|.++...+..... .-+..+ ...+.+..+....... -++..+.+|.+.. +++..-.
T Consensus 178 ~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~-~i~~~t~~G~~ir~~~~~~~i~ 248 (276)
T 3no0_A 178 PYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEV-ELLITTKNGKAFYDKINQKDIP 248 (276)
T ss_dssp SEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEE-EEEEEETTSCEEEEEEEGGGSC
T ss_pred CEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCC-EEEEEcCCCeEEEeeeCHHHCC
Confidence 6888889999999887643210 012222 2334555554433333 2555678888887 8775433
No 368
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=59.94 E-value=1.9e+02 Score=31.12 Aligned_cols=33 Identities=30% Similarity=0.331 Sum_probs=27.4
Q ss_pred CeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCe
Q 010748 406 AVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 439 (502)
Q Consensus 406 ~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~ 439 (502)
.+.+++..++. .+++|-+.|+++|+|++.+++.
T Consensus 237 ~~~~~~~~~~~-~~lftl~~D~~LRiWsl~t~~~ 269 (950)
T 4gq2_M 237 TIISMIFLSTY-NVLVMLSLDYKLKVLDLSTNQC 269 (950)
T ss_dssp CEEEEEEETTT-TEEEEEETTCEEEEEETTTTEE
T ss_pred eEEEEeecCCC-cEEEEEECCCEEEEEECCCCCe
Confidence 45666777665 7999999999999999999874
No 369
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=58.77 E-value=1.2e+02 Score=28.44 Aligned_cols=117 Identities=18% Similarity=0.132 Sum_probs=66.9
Q ss_pred cceeeEEeccC--CCcEEEEEecCCcEEEEeCCC-------CeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEE
Q 010748 267 DSVLGLAWNKE--FRNILASASADKQVKIWDVAA-------GKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMK 337 (502)
Q Consensus 267 ~~V~~l~~~~~--~~~~l~sgs~dg~v~vwd~~~-------~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iw 337 (502)
..|.++...++ ...+|+.++..|.++...+.. |.....+.. .+.+..+...... ..++..+..|.+..+
T Consensus 99 e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~-~~i~l~T~~G~~irf 176 (370)
T 3l6v_A 99 ERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGD-RDVLLFASNGKTVRF 176 (370)
T ss_dssp CCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSC-CEEEEEETTSEEEEE
T ss_pred CEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCC-ceEEEEeCCCeEEEE
Confidence 44555543321 134888999999999987642 222233433 4555555555444 567778888988888
Q ss_pred ecCCCCCc--------cceEeecCCeeEEEeCCC----------------------------------CCCEEEEEeCCC
Q 010748 338 DARISTHS--------GFKWAVAADVESLAWDPH----------------------------------AEHSFVVSLEDG 375 (502)
Q Consensus 338 d~~~~~~~--------~~~~~~~~~v~~v~~~~~----------------------------------~~~~~~~~~~dg 375 (502)
....-... .........|.++...+. ....+++.+..|
T Consensus 177 ~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~~~~~~~~il~vTe~G 256 (370)
T 3l6v_A 177 GESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVADNGDVAYILTATENG 256 (370)
T ss_dssp EGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC-----------------------------------CEEEEEETTS
T ss_pred EccccCccCCCCCCeeeEEeCCCCEEEEEEEeccccccccccccccccccccccccccccccccccccCCceEEEeeCCC
Confidence 75431111 111122344555544331 234688889999
Q ss_pred cEEEEECCCC
Q 010748 376 TIKGFDIRTA 385 (502)
Q Consensus 376 ~v~i~d~~~~ 385 (502)
..+...+...
T Consensus 257 ~gKrt~~~e~ 266 (370)
T 3l6v_A 257 YGKRTPLAEY 266 (370)
T ss_dssp EEEEEEGGGS
T ss_pred CEEEEEHHHh
Confidence 9888887654
No 370
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=52.53 E-value=1.4e+02 Score=27.19 Aligned_cols=206 Identities=11% Similarity=0.051 Sum_probs=109.2
Q ss_pred CCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEe
Q 010748 207 EKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS 286 (502)
Q Consensus 207 ~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs 286 (502)
++..++++.+.+|.|+--.+........ .........+..+ +.+..+..... ...++..+
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~------------------~~~g~~~~~lke~-D~l~~~~~~~~-~~~ll~~T 65 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGT------------------GGKGLSSFDLNDG-DEIVIALCVNT-HDYLFMIS 65 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCS------------------SCCCEECCCCCTT-CCEEEEEEEET-TCEEEEEE
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhcccc------------------CCCCceecccCCC-CEEEEEEEECC-CCEEEEEE
Confidence 4577889999999999887653221110 0001111122222 44444444443 34677778
Q ss_pred cCCcEEEEeCC---CC------ee---eEeeccCCCCeEEEEEcCC--CCcEEEEEeCCCcEEEEecCCCCCc------c
Q 010748 287 ADKQVKIWDVA---AG------KC---NLTLEHHTDKVQAVAWNHH--SPQILLSGSFDRSVVMKDARISTHS------G 346 (502)
Q Consensus 287 ~dg~v~vwd~~---~~------~~---~~~~~~h~~~v~~l~~~~~--~~~~l~s~s~dg~i~iwd~~~~~~~------~ 346 (502)
..|.++-.... .. .. ...+. ....|.++...+. ....|+..+..|.++...+...... .
T Consensus 66 ~~G~~~~~~~~~ip~~~r~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~ 144 (312)
T 1suu_A 66 NEGKLYLINAYEIKDSSRASKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIV 144 (312)
T ss_dssp TTSEEEEEEGGGSCC-------CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEEC
T ss_pred CCCeEEEEEHHHCCCCCccCCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEE
Confidence 88887666542 11 11 11122 2345555543321 2267888899999998877532211 1
Q ss_pred ceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCC
Q 010748 347 FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD 426 (502)
Q Consensus 347 ~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~d 426 (502)
........+..+..... ...++..+..|.+..+...................+.. ...|.++.....+ ..+++.+..
T Consensus 145 i~L~~~d~lv~~~~~~~-~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~-~~l~~vt~~ 221 (312)
T 1suu_A 145 IKLNDKDFVTSAEIVFK-DEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKEN-PYLLIVSEN 221 (312)
T ss_dssp BCCCTTCCEEEEEEECT-TCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTC-SEEEEEETT
T ss_pred EecCCCCEEEEEEEeCC-CCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCC-CeEEEEECC
Confidence 11122445555555432 33688888999999998765321111111122222332 3445555544444 568888999
Q ss_pred CcEEEEECCC
Q 010748 427 KMVKLWDLSN 436 (502)
Q Consensus 427 g~i~vwd~~~ 436 (502)
|..+...+..
T Consensus 222 G~~kr~~~~e 231 (312)
T 1suu_A 222 GYGKRLNMSK 231 (312)
T ss_dssp SEEEEEEGGG
T ss_pred CceEEEEHHH
Confidence 9999988743
No 371
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=50.04 E-value=2.1e+02 Score=28.68 Aligned_cols=184 Identities=13% Similarity=0.165 Sum_probs=99.5
Q ss_pred CcccceeeEEeccCCCcEEEEEecCCcE----------------------------EEEeCCCCeeeEeeccC--CCC--
Q 010748 264 SHTDSVLGLAWNKEFRNILASASADKQV----------------------------KIWDVAAGKCNLTLEHH--TDK-- 311 (502)
Q Consensus 264 ~h~~~V~~l~~~~~~~~~l~sgs~dg~v----------------------------~vwd~~~~~~~~~~~~h--~~~-- 311 (502)
.|-..+.-..|..+|..-++....+|++ .+++-.+|+.+.++... ...
T Consensus 180 ahyt~~~V~DlDGDGkaEIvv~TadGt~dg~g~vigd~~~dyr~~~g~il~G~eyL~vfdG~TG~~l~t~~~~p~rg~~~ 259 (620)
T 2zuy_A 180 AHYTQFMVYDLDGDGKAEIAMKTADGTTDGKGHIIGDEQADFRNEQGRILSGPEYLTVFKGETGEALTTVEYEPPRGKLE 259 (620)
T ss_dssp TTSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSCTTCCCBCTTSCBCSSCCEEEEEETTTCCEEEEEECSSCCCSGG
T ss_pred cccCceeEEEcCCCCcceEEEEccCCcccCcceeecccccccccccceEecCCeEEEEEcCCCcceeeecccCCCcCccc
Confidence 3667788888888887788888777764 77887778776655321 111
Q ss_pred -------------eEEEEEcCC-CCcEEEEEeC--CCcEEEEecCCCCCccceEeec--------------CCeeEEEeC
Q 010748 312 -------------VQAVAWNHH-SPQILLSGSF--DRSVVMKDARISTHSGFKWAVA--------------ADVESLAWD 361 (502)
Q Consensus 312 -------------v~~l~~~~~-~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~--------------~~v~~v~~~ 361 (502)
..++++... .+.++++-+. -..|..||.+..+... .|... ..+....+.
T Consensus 260 ~WGD~yGnR~drf~~~vayLDG~~Ps~v~~rG~Ytr~~v~A~d~~~g~L~~-~W~~ds~~~~~~~~~gqg~H~~svaDVD 338 (620)
T 2zuy_A 260 DWGDGYGNRMDRFLAGTAYLDGERPSLVMARGYYTRTVLVAYDFRNGRLKK-RWVFDSNQPGHEAYAGQGNHSLSVADVD 338 (620)
T ss_dssp GGTSSSSTTTTCEEEEEECTTCC-CEEEEEECSSSSCEEEEEEEETTEEEE-EEEEETTSTTCGGGTTCCCSSCEEECCS
T ss_pred cccccccccccccceeEEecCCCCceEEEecCcccceeEEEEEccCCceee-eeEecCCCCcccccccccCcCceEEecC
Confidence 223333221 1223332221 2346677776644322 22221 123333444
Q ss_pred CCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEE-eccCCCeeEEEEcCCCCCEEEEE-eCC----CcEEEEECC
Q 010748 362 PHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLLATG-STD----KMVKLWDLS 435 (502)
Q Consensus 362 ~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l~t~-s~d----g~i~vwd~~ 435 (502)
-+|..-++.|+ .++|-. ...++.. .+|...+....|.|+.+.+.+.+ ..+ .-..++|.+
T Consensus 339 GDG~dEIv~Gs-----~~iD~d----------G~~L~st~~gHGDa~hv~d~dP~rpGlev~~~~E~~~~~~G~~~~DA~ 403 (620)
T 2zuy_A 339 GDGKDEIIYGA-----MAVDHD----------GTGLYSTGLGHGDAMHVGDLDPSRKGLEVFQVHEDATKPYGLSLRDAG 403 (620)
T ss_dssp SSSSCEEEETT-----EEECTT----------SSEEEECSCCCCSCEEEECSCTTSSSCEEEEECCCTTSSCSEEEEETT
T ss_pred CCCceeEEEee-----eEECCC----------CCEEeecCCCCCceeEEEecCCCCCCCEEEEEecCCCCCCceEEEECC
Confidence 45554455443 122311 1222222 26777788888888866655544 333 247789999
Q ss_pred CCCeeEEEEecCCCCcEEEEEEcCCCCc
Q 010748 436 NNQPSCIASRNPKAGAVFSVAFSEDSPF 463 (502)
Q Consensus 436 ~~~~~~~~~~~~~~~~v~~~~~spd~~~ 463 (502)
+++..-......+.+......|.|+.+-
T Consensus 404 tG~vlw~~~~~~D~Gr~~~~Didp~~pG 431 (620)
T 2zuy_A 404 TGEILWGVHAGTDVGRGMAAHIDPSYKG 431 (620)
T ss_dssp TCCEEEEECCSSCCCEEEEECCCTTSSS
T ss_pred CCcEEEEecCcccCCceEEEecCCCCCc
Confidence 9984332223345666777778787653
No 372
>2m0n_A Putative uncharacterized protein; tuberculosis, structural genomics, seattle structural genomi for infectious disease, ssgcid; NMR {Mycobacterium abscessus}
Probab=47.64 E-value=15 Score=27.60 Aligned_cols=33 Identities=15% Similarity=0.253 Sum_probs=27.4
Q ss_pred eeeeccCCCCCcCCcc----------cCCCCHHHHHHHHhcccc
Q 010748 4 AVSWVPKGASKAVPEE----------AEPPSKEEIEEIINSGAL 37 (502)
Q Consensus 4 ~~~~~~~g~~~~~~~~----------~~~~~~~~~~~~~~~~~~ 37 (502)
.+.|++-||+.-+|.+ =.| ++||+.++......
T Consensus 13 ~v~WLRAGYPeGVP~~Dy~PLLALL~R~L-tdeEV~~Va~~L~~ 55 (112)
T 2m0n_A 13 EAQTQGPGSPEGVPPTDRFPLLALLRRTL-TEEQVQEVVAKLTD 55 (112)
T ss_dssp CCCCCTTSSCCSCCSCSCCGGGGCCCSSC-CHHHHHHHHHHHTC
T ss_pred hhhhHhccCCCCCCCCccHHHHHHhhccC-CHHHHHHHHHHHHh
Confidence 4789999999999987 279 99999997766543
No 373
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=47.10 E-value=27 Score=36.08 Aligned_cols=38 Identities=13% Similarity=0.218 Sum_probs=30.8
Q ss_pred cceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeecc
Q 010748 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEH 307 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~ 307 (502)
..|.++.+. ..+|++-+.|+++|+|++.+++++.+..-
T Consensus 222 ~~Is~~~~~---~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLFH---ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEET---TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEeccC---CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 456666553 35999999999999999999999887754
No 374
>4fp9_B Mterf domain-containing protein 2; modification enzyme, transferase; HET: SAM; 2.90A {Homo sapiens}
Probab=44.15 E-value=5.6 Score=37.00 Aligned_cols=9 Identities=11% Similarity=0.106 Sum_probs=4.1
Q ss_pred CCCCCcCCc
Q 010748 10 KGASKAVPE 18 (502)
Q Consensus 10 ~g~~~~~~~ 18 (502)
+|.++.-|.
T Consensus 225 lG~~q~~~~ 233 (335)
T 4fp9_B 225 LGRYQTPDK 233 (335)
T ss_dssp HTSCCCCCS
T ss_pred cCCccCCCc
Confidence 455544333
No 375
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=42.96 E-value=45 Score=36.89 Aligned_cols=33 Identities=30% Similarity=0.331 Sum_probs=26.0
Q ss_pred CeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCe
Q 010748 406 AVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 439 (502)
Q Consensus 406 ~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~ 439 (502)
.+.+++..++. .+++|-+.|+++|||++.+++.
T Consensus 239 ~~vs~~~~~~~-~~lftL~~D~~LRiWsl~t~~~ 271 (1139)
T 4fhn_B 239 TIISMIFLSTY-NVLVMLSLDYKLKVLDLSTNQC 271 (1139)
T ss_dssp CBSCCEEETTT-TEEEEEBTTCEEEEEETTTTEE
T ss_pred eeEEeeccCCc-cEEEEEeCCCEEEEEECCCCCe
Confidence 34455555655 8999999999999999998873
No 376
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=41.72 E-value=2.1e+02 Score=26.20 Aligned_cols=166 Identities=12% Similarity=0.021 Sum_probs=90.5
Q ss_pred cceeeEEeccC--CCcEEEEEecCCcEEEEeCCC-------CeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEE
Q 010748 267 DSVLGLAWNKE--FRNILASASADKQVKIWDVAA-------GKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMK 337 (502)
Q Consensus 267 ~~V~~l~~~~~--~~~~l~sgs~dg~v~vwd~~~-------~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iw 337 (502)
..|.++...++ ...+++.++..|.|+--.+.. +.....+.. .+.+..+...... ..|+..+..|.+..+
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~-d~ill~T~~G~~~rf 172 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAG-DDLLLVSANGQSIRF 172 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTT-CEEEEEETTSEEEEE
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCC-CEEEEEECCCeEEEE
Confidence 44555433321 145899999999999987653 222233443 4455555554444 567778889988888
Q ss_pred ecC--CCCCcc--------ceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCe
Q 010748 338 DAR--ISTHSG--------FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAV 407 (502)
Q Consensus 338 d~~--~~~~~~--------~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v 407 (502)
... .-.... ........|.++...+.+ ..++..+..|.++.-.+.................+..-...+
T Consensus 173 ~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~-~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~l 251 (327)
T 3uc1_A 173 SATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREG-TYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRL 251 (327)
T ss_dssp ECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTT-CEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSE
T ss_pred ECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCC-CEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeE
Confidence 766 211100 111223456666555433 378888999999888765432111100011111222212344
Q ss_pred eEEEEcCCCCCEEEEEeCCCcEEEEECCC
Q 010748 408 CTISYNPLVPNLLATGSTDKMVKLWDLSN 436 (502)
Q Consensus 408 ~~l~~sp~~~~~l~t~s~dg~i~vwd~~~ 436 (502)
..+...... ..++..+..|.+.-+....
T Consensus 252 v~~~~~~~~-~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 252 VGALIVDDD-SELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp EEEEEECTT-CEEEEEEGGGCEEEEEGGG
T ss_pred EEEEEeCCC-ccEEEEcCCCeEEEEehhh
Confidence 444443333 5666677778877776543
No 377
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=40.38 E-value=2.1e+02 Score=25.84 Aligned_cols=166 Identities=14% Similarity=0.055 Sum_probs=87.4
Q ss_pred cceeeEEecc--CCCcEEEEEecCCcEEEEeCCC-------CeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEE
Q 010748 267 DSVLGLAWNK--EFRNILASASADKQVKIWDVAA-------GKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMK 337 (502)
Q Consensus 267 ~~V~~l~~~~--~~~~~l~sgs~dg~v~vwd~~~-------~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iw 337 (502)
..|.++...+ ....+++..+..|.++-..+.. +.....+..+ +.+..+...... ..++..+..|.+..+
T Consensus 95 e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~-~~i~l~T~~G~~irf 172 (307)
T 1zi0_A 95 ERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGE-DEVMLFSAEGKVVRF 172 (307)
T ss_dssp CCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTT-CEEEEEETTSEEEEE
T ss_pred CEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCC-CEEEEECCCCcEEEE
Confidence 4455554321 1134788899999999987642 2222334433 556555554444 567778888988888
Q ss_pred ecCCCCCc--------cceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeE
Q 010748 338 DARISTHS--------GFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCT 409 (502)
Q Consensus 338 d~~~~~~~--------~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 409 (502)
....-... .........|.++.....+. .+++.+..|.++-.++.................+....+.+..
T Consensus 173 ~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~-~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~lv~ 251 (307)
T 1zi0_A 173 KESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVG 251 (307)
T ss_dssp EGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSC-EEEEEETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSEEE
T ss_pred EHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCC-EEEEEEcCCceEEEEHHHhccCCCCCCCEEeeEecCCCCeEEE
Confidence 76431111 11122234566665544333 6888899999988877543211100001112222222344544
Q ss_pred EEEcCCCCCEEEEEeCCCcEEEEECCC
Q 010748 410 ISYNPLVPNLLATGSTDKMVKLWDLSN 436 (502)
Q Consensus 410 l~~sp~~~~~l~t~s~dg~i~vwd~~~ 436 (502)
+...... .-++..+.+|.+.-+.+..
T Consensus 252 ~~~v~~~-~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 252 AVQVDDC-DQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp EEEECTT-CEEEEEESSCCEEEEEGGG
T ss_pred EEEeCCC-ceEEEEcCCCcEEEEeccc
Confidence 4443322 4455666677766666543
No 378
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=40.34 E-value=1.1e+02 Score=31.52 Aligned_cols=38 Identities=13% Similarity=0.173 Sum_probs=28.2
Q ss_pred CCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEe
Q 010748 405 KAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASR 445 (502)
Q Consensus 405 ~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~ 445 (502)
..|.++.+. ..+++|-+.|.++|+|++.+++......+
T Consensus 222 ~~Is~~~~~---~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLFH---ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEET---TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEeccC---CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 345655554 37999999999999999999885444443
No 379
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=38.02 E-value=1.1e+02 Score=30.97 Aligned_cols=59 Identities=14% Similarity=0.100 Sum_probs=38.6
Q ss_pred eeEEEEcCCCCCEEEEEeCC------------CcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEE
Q 010748 407 VCTISYNPLVPNLLATGSTD------------KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAI 467 (502)
Q Consensus 407 v~~l~~sp~~~~~l~t~s~d------------g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~s 467 (502)
.-.|+|+|.| +++++-..+ ..+.+.+..+++...+... .....++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G-~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~-P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAG-RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG-PIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTC-CEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEEC-CTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCC-CEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeC-CCCccCcCeeECCCCCEEEEE
Confidence 3568899988 555543221 2355666667775444443 345789999999999976654
No 380
>2lky_A Uncharacterized protein; infectious disease, tuberculosis, DUF proteins, ssgcid, STRU genomics; NMR {Mycobacterium smegmatis str}
Probab=36.39 E-value=6.9 Score=29.39 Aligned_cols=32 Identities=22% Similarity=0.447 Sum_probs=27.4
Q ss_pred eeeeccCCCCCcCCcc----------cCCCCHHHHHHHHhccc
Q 010748 4 AVSWVPKGASKAVPEE----------AEPPSKEEIEEIINSGA 36 (502)
Q Consensus 4 ~~~~~~~g~~~~~~~~----------~~~~~~~~~~~~~~~~~ 36 (502)
-+.|+..||+.-+|.+ -.| ++||+.++.....
T Consensus 13 iv~WLRAGYP~GVP~~Dy~PLLALL~r~L-tdeev~~Va~~L~ 54 (112)
T 2lky_A 13 IAAWLNAGYPEGVPGPDRVPLLALLTRRL-TNDEIKAIAEDLE 54 (112)
T ss_dssp HHHHHHHHCSSCCCHHHHHHHHHHHTTTC-CHHHHHHHHHHHH
T ss_pred HHHHHHccCCCCCCCcchHHHHHHHcccC-CHHHHHHHHHHHH
Confidence 4789999999999987 489 9999999776654
No 381
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=35.44 E-value=2.4e+02 Score=25.02 Aligned_cols=164 Identities=17% Similarity=0.156 Sum_probs=88.4
Q ss_pred cceeeEEeccCCCcEEEEEecCCcEEEEeCCCCeeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCCCCCcc
Q 010748 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG 346 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~ 346 (502)
..|..++.... +.++. . +|.|..|-....-.+..-......|..++..... .++ -. +|.|..|-........
T Consensus 102 ~~v~~ia~G~~--hs~al-~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~--~~~-l~-~G~v~~wG~n~~gqlg 173 (282)
T 3qhy_B 102 SGVDAIAAGAW--ASYAL-K-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYT--ALA-VK-NGGVIAWGDNYFGQTT 173 (282)
T ss_dssp SSEEEEEEETT--EEEEE-E-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE--EEE-EE-TTEEEEEECCTTSTTS
T ss_pred CCeEEEECcCC--EEEEE-e-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCE--EEE-EE-CCEEEEecCCCCCCCC
Confidence 35777776554 23333 4 8999999765432221111123457777665433 233 33 7999999776543322
Q ss_pred ceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCC
Q 010748 347 FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD 426 (502)
Q Consensus 347 ~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~d 426 (502)
........|..++.-.. ..++. .+|.|+.|-........ .+. .....|..|+.... ..++. . +
T Consensus 174 ~p~~~~~~v~~i~~G~~--hs~al--~~G~v~~wG~n~~gqlg-----~p~----~~~~~v~~i~~G~~--h~~al-~-~ 236 (282)
T 3qhy_B 174 VPAEAQSGVDDVAGGIF--HSLAL--KDGKVIAWGDNRYKQTT-----VPT----EALSGVSAIASGEW--YSLAL-K-N 236 (282)
T ss_dssp CCGGGGSSEEEEEECSS--EEEEE--ETTEEEEEECCTTSTTC-----CCG----GGGSSCCEEEECSS--CEEEE-E-T
T ss_pred CceecCCCeEEEEecCC--EEEEE--ECCeEEEEECCCCCCCC-----CCc----ccCCCceEEEcCCC--EEEEE-E-C
Confidence 22223456777776542 23444 59999999766542111 111 11234677765543 33333 3 9
Q ss_pred CcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCC
Q 010748 427 KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDS 461 (502)
Q Consensus 427 g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~ 461 (502)
|.|+.|=.....+..+ ...|.+++.-...
T Consensus 237 g~v~~wG~n~~gq~~v------~~~v~~iaaG~~h 265 (282)
T 3qhy_B 237 GKVIAWGSSRTAPSSV------QSGVSSIEAGPNA 265 (282)
T ss_dssp TEEEEESTTCCCCGGG------SSCEEEEEECSSC
T ss_pred CEEEEecCCCCccccC------CCCcEEEEECcCe
Confidence 9999997655432211 2346666665554
No 382
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=35.28 E-value=2.5e+02 Score=25.34 Aligned_cols=196 Identities=12% Similarity=0.079 Sum_probs=108.2
Q ss_pred CcEEEEEecCCcEEEEeCCCCee-------e--EeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCC---CC---
Q 010748 279 RNILASASADKQVKIWDVAAGKC-------N--LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI---ST--- 343 (502)
Q Consensus 279 ~~~l~sgs~dg~v~vwd~~~~~~-------~--~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~---~~--- 343 (502)
..++++.+.+|.|+--.+..-+. + ..++. .+.+..+...... ..++..+..|.++-+.... ..
T Consensus 8 e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~~~-~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 8 ENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVNTH-DYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEETT-CEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEECCC-CEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 45788899999999876643221 1 12232 3445444444444 5677778889877766532 10
Q ss_pred ---Cc--cceEeecCCeeEEEeCCC--CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCC
Q 010748 344 ---HS--GFKWAVAADVESLAWDPH--AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLV 416 (502)
Q Consensus 344 ---~~--~~~~~~~~~v~~v~~~~~--~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~ 416 (502)
.. .........|.++...+. ....++..+..|.++...+....... ........+.. ...+..+......
T Consensus 86 ~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r--~~G~~~i~L~~-~d~lv~~~~~~~~ 162 (312)
T 1suu_A 86 KGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVK--SRGVIVIKLND-KDFVTSAEIVFKD 162 (312)
T ss_dssp --CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC------CEECBCCCT-TCCEEEEEEECTT
T ss_pred CCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccC--CCcEEEEecCC-CCEEEEEEEeCCC
Confidence 00 011122334544433221 23468888999999998876542111 00122223333 3455555554333
Q ss_pred CCEEEEEeCCCcEEEEECCCC-------CeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCCcEEEEECCCC
Q 010748 417 PNLLATGSTDKMVKLWDLSNN-------QPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 417 ~~~l~t~s~dg~i~vwd~~~~-------~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg~i~vwd~~~~ 482 (502)
..++..+..|.+..+....- +-.....+.. ...|.++...+++.. |++.+..|..+...+..-
T Consensus 163 -~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~~-l~~vt~~G~~kr~~~~e~ 232 (312)
T 1suu_A 163 -EKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKENPY-LLIVSENGYGKRLNMSKI 232 (312)
T ss_dssp -CEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTCSE-EEEEETTSEEEEEEGGGS
T ss_pred -CEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCCCe-EEEEECCCceEEEEHHHh
Confidence 67888899999998876541 1111222222 345666666555554 666788999998888543
No 383
>2kvc_A Putative uncharacterized protein; structural genomics, seattle structural genomi for infectious disease, ssgcid, unknown function; NMR {Mycobacterium tuberculosis}
Probab=35.23 E-value=7.1 Score=28.88 Aligned_cols=33 Identities=21% Similarity=0.488 Sum_probs=27.5
Q ss_pred ceeeeccCCCCCcCCcc----------cCCCCHHHHHHHHhccc
Q 010748 3 AAVSWVPKGASKAVPEE----------AEPPSKEEIEEIINSGA 36 (502)
Q Consensus 3 ~~~~~~~~g~~~~~~~~----------~~~~~~~~~~~~~~~~~ 36 (502)
|-+.|+..||+.-+|.+ -.| ++||+.++.....
T Consensus 10 siv~WLRaGYP~GVP~~Dy~PLlALL~r~L-tdeev~~Va~~L~ 52 (103)
T 2kvc_A 10 SIVAWLRAGYPEGIPPTDSFAVLALLCRRL-SHDEVKAVANELM 52 (103)
T ss_dssp HHHHHHHHHCTTCCCHHHHHHHHHHHTTTS-CHHHHHHHHHHHH
T ss_pred HHHHHHHccCCCCCCCcchHHHHHHHhccC-CHHHHHHHHHHHH
Confidence 34789999999999987 389 9999999766654
No 384
>3ol3_A Putative uncharacterized protein; tuberculosis, RV0543C, ortholog, iodide ION S phasing, structural genomics; HET: PG4 PGE; 1.95A {Mycobacterium smegmatis} PDB: 3ol4_A
Probab=32.30 E-value=7.8 Score=28.89 Aligned_cols=33 Identities=18% Similarity=0.412 Sum_probs=27.1
Q ss_pred ceeeeccCCCCCcCCcc----------cCCCCHHHHHHHHhccc
Q 010748 3 AAVSWVPKGASKAVPEE----------AEPPSKEEIEEIINSGA 36 (502)
Q Consensus 3 ~~~~~~~~g~~~~~~~~----------~~~~~~~~~~~~~~~~~ 36 (502)
|-+.|++.||+.-+|.+ =.| +++|+.++.....
T Consensus 15 siv~WLRaGYPeGVP~~Dy~PLlALL~R~L-tddev~~Va~~L~ 57 (107)
T 3ol3_A 15 NVLGWLHKGYPEGVPPKDYFALLALLKRSL-TEDEVVRAAQAIL 57 (107)
T ss_dssp HHHHHHHHHCTTCBCGGGHHHHHHHHTCCC-CHHHHHHHHHHHH
T ss_pred HHHHHHHccCCCCCCCCccHHHHHHhcccC-CHHHHHHHHHHHH
Confidence 34789999999999987 279 9999999765553
No 385
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=32.04 E-value=3.2e+02 Score=25.49 Aligned_cols=251 Identities=11% Similarity=0.065 Sum_probs=126.0
Q ss_pred CCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEe
Q 010748 207 EKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS 286 (502)
Q Consensus 207 ~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs 286 (502)
|+..++++.+.+|.|+--.+...... ++..+......+. ..+.+..+..... ...|+..+
T Consensus 5 ~~e~~~v~lT~~GyIKr~~l~~y~~~------------------~r~g~g~~~~~lk-e~D~l~~~~~~~t-~d~ll~fT 64 (370)
T 3l6v_A 5 APEDVVVTLSHAGYAKRQPVSAYRAQ------------------RRGGRGRSAASTK-EEDFIDQLWLVNT-HDTLLTFT 64 (370)
T ss_dssp CCCCEEEEEESSCEEEEEEHHHHHHT------------------CCCCCCSEEEECS-CCCCEEEEEEECT-TCEEEEEE
T ss_pred cCCCEEEEEeCCCEEEEeeHHHhhhh------------------ccCCCCceecccC-CCCEEEEEEEecC-CCEEEEEe
Confidence 56789999999999997665321100 0000011111222 3455666555554 34566667
Q ss_pred cCCcEEEEe---CCC------CeeeEe---eccCCCCeEEEEEcC--CCCcEEEEEeCCCcEEEEecCCCCCc------c
Q 010748 287 ADKQVKIWD---VAA------GKCNLT---LEHHTDKVQAVAWNH--HSPQILLSGSFDRSVVMKDARISTHS------G 346 (502)
Q Consensus 287 ~dg~v~vwd---~~~------~~~~~~---~~~h~~~v~~l~~~~--~~~~~l~s~s~dg~i~iwd~~~~~~~------~ 346 (502)
..|.+.-+. +.. |..+.. +. ....|.++..-. ....+|+.++..|.++...+...... .
T Consensus 65 ~~G~~~~~~~~eip~~~r~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~a 143 (370)
T 3l6v_A 65 SSGKVFWLPVHQLPEAGSNARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIA 143 (370)
T ss_dssp TTSEEEEEEGGGSCBCCTTSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEES
T ss_pred CCCeEEEEEHHHCcCCCcccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEE
Confidence 777765544 332 222222 22 245666654432 12268999999999998876532211 1
Q ss_pred ceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCC-----------
Q 010748 347 FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPL----------- 415 (502)
Q Consensus 347 ~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~----------- 415 (502)
........+..+..... ...++..+..|.+..|...................+. ....|.++...+.
T Consensus 144 i~L~~~d~lv~v~~~~~-~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~-~~d~Vv~~~~~~~~~~~~~~~~~~ 221 (370)
T 3l6v_A 144 INLDEGDALVGVALTDG-DRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLA-KGEEVVSLIVSERAGGVEDEVEDE 221 (370)
T ss_dssp SCCCTTCCEEEEEEECS-CCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEECCC----------
T ss_pred EEeCCCCEEEEEEEeCC-CceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeC-CCCEEEEEEEeccccccccccccc
Confidence 11122344555544432 3368888889998888765432111110011111122 1234444443331
Q ss_pred -----------------------CCCEEEEEeCCCcEEEEECCCCCe-------eEEEEecCCCCcEEEEEEcCCCCcEE
Q 010748 416 -----------------------VPNLLATGSTDKMVKLWDLSNNQP-------SCIASRNPKAGAVFSVAFSEDSPFVL 465 (502)
Q Consensus 416 -----------------------~~~~l~t~s~dg~i~vwd~~~~~~-------~~~~~~~~~~~~v~~~~~spd~~~ll 465 (502)
....+++.+..|..+...+..... .....+....+.+..+.+..+... +
T Consensus 222 ~~~~~~~t~~g~~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~d~-i 300 (370)
T 3l6v_A 222 SAEEVVETTDGAEPAVIDVADNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGSTDE-V 300 (370)
T ss_dssp -------------------------CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTTCE-E
T ss_pred cccccccccccccccccccccccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCCce-E
Confidence 225788999999999887654221 111122222345555444333332 3
Q ss_pred EEEeCCCcEEEEECCC
Q 010748 466 AIGGSKGKLEIWDTLS 481 (502)
Q Consensus 466 ~sg~~dg~i~vwd~~~ 481 (502)
+..+..|.+.-..+..
T Consensus 301 ~liT~~G~~iR~~v~~ 316 (370)
T 3l6v_A 301 MLISDGGTLVRTRGSE 316 (370)
T ss_dssp EEEETTCCEEEEEGGG
T ss_pred EEEcCCCeEEEeeHhh
Confidence 3346666666555543
No 386
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=29.56 E-value=3.6e+02 Score=25.30 Aligned_cols=117 Identities=9% Similarity=0.043 Sum_probs=65.8
Q ss_pred cceeeEEec---cC----CCcEEEEEecCCcEEEEeCCCCeeeEeecc----C--------------CCCeEEEEEcCC-
Q 010748 267 DSVLGLAWN---KE----FRNILASASADKQVKIWDVAAGKCNLTLEH----H--------------TDKVQAVAWNHH- 320 (502)
Q Consensus 267 ~~V~~l~~~---~~----~~~~l~sgs~dg~v~vwd~~~~~~~~~~~~----h--------------~~~v~~l~~~~~- 320 (502)
..+..+++. |. ++...++=+..+.|.|+|+.+++.-+.+.. . ...|..|+.+|+
T Consensus 152 S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~ 231 (381)
T 3q6k_A 152 TYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRD 231 (381)
T ss_dssp GGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCC
T ss_pred CccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCc
Confidence 456777776 21 232334444567899999998876544310 0 246778888887
Q ss_pred ---CCcEEEEEeCCC-cEEEEe---cCCCCCc--cceEeec---CCeeEEEeCCCCCCEEEEEeCCCcEEEEECCC
Q 010748 321 ---SPQILLSGSFDR-SVVMKD---ARISTHS--GFKWAVA---ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 384 (502)
Q Consensus 321 ---~~~~l~s~s~dg-~i~iwd---~~~~~~~--~~~~~~~---~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~ 384 (502)
+ +.|+-+...+ .+.-.. ++..... ....+.. +.-..++.++..+.++++--....|..|+..+
T Consensus 232 ~~~~-~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 232 SEGN-RPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp TTSC-CEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred CCCC-eEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 4 4555554443 333332 2222211 1122333 23345667643445677777888999999875
No 387
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=27.78 E-value=3.7e+02 Score=24.94 Aligned_cols=255 Identities=11% Similarity=0.050 Sum_probs=0.0
Q ss_pred ccccCCCceEEEEEecCCcceeEEEEEecCCCCCCCeeeeeccccCCCcceeeeecCC----CCCCCCCCEEEEecCCCc
Q 010748 145 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCP----LKDREKGNFMAVGSMEPA 220 (502)
Q Consensus 145 ~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~s~~~~~la~g~~dg~ 220 (502)
+.++-.....++-..++ +||.|-.... -...+........|..+..+.-. +..+....+.+.-+.+|.
T Consensus 56 ~~i~~G~~~~~~l~~~G-----~v~~wG~n~~---GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~ 127 (389)
T 3kci_A 56 VQLIGGEQTLFAVTADG-----KLYATGYGAG---GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 127 (389)
T ss_dssp EEEEEETTEEEEEETTS-----CEEEEECCGG---GTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSC
T ss_pred EEEEeCCCeEEEEcCCC-----cEEEEECCCC---CCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCC
Q ss_pred EEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEecCCcEEEEeCCCC-
Q 010748 221 IEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG- 299 (502)
Q Consensus 221 I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~~~~- 299 (502)
|..|-......+.. ........+.....-....|..|+.... ..+.-..+|.|..|-....
T Consensus 128 v~~wG~n~~GqLG~---------------g~~~~~~~p~~v~~l~~~~i~~va~G~~---hs~alt~~G~v~~wG~n~~G 189 (389)
T 3kci_A 128 VYSWGEAEDGKLGH---------------GNRSPCDRPRVIESLRGIEVVDVAAGGA---HSACVTAAGDLYTWGKGRYG 189 (389)
T ss_dssp EEEEECCGGGTTCS---------------SSCCCEEEEEECGGGTTSCEEEEEECSS---EEEEEETTSCEEEEECCGGG
T ss_pred EEEEeCCCCCcCCC---------------CCCccCcCCeEecccCCCeEEEEEeCcC---eEEEEeCCCeEEEeCCCCCC
Q ss_pred -----------eeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEecCC------------CCCccceEeecCCee
Q 010748 300 -----------KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI------------STHSGFKWAVAADVE 356 (502)
Q Consensus 300 -----------~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd~~~------------~~~~~~~~~~~~~v~ 356 (502)
.+...-......|..++..... ...++-..+|.|..|-... ..+..........|.
T Consensus 190 qLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~-~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~ 268 (389)
T 3kci_A 190 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGD-AQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVV 268 (389)
T ss_dssp TTCSSSCCCEEEEEECGGGTTSCEEEEEECCSS-CEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEE
T ss_pred CcCCCCCcccccceEecccCCCeEEEEEEcCCC-cEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEE
Q ss_pred EEEeCCCCCCEEEEEeCCCcEEEEECCCCCCC---CCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEE
Q 010748 357 SLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSD---PDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 432 (502)
Q Consensus 357 ~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~---~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vw 432 (502)
.++. +....++-..+|.|+.|-....... .......+..........|..|+... ...+....+|.|+.|
T Consensus 269 ~v~~---G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G~---~h~~al~~~G~v~~w 341 (389)
T 3kci_A 269 KVEC---GSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGS---LHCVCCTEDGEVYTW 341 (389)
T ss_dssp EEEE---ETTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECS---SEEEEEETTCCEEEE
T ss_pred EEeC---CCCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEecc---CeEEEECCCCCEEEe
No 388
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=27.68 E-value=2.2e+02 Score=28.46 Aligned_cols=65 Identities=14% Similarity=0.124 Sum_probs=41.2
Q ss_pred CeeEEEEcCCCCCEEE-EEeC-----------CCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEEeCCC
Q 010748 406 AVCTISYNPLVPNLLA-TGST-----------DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKG 472 (502)
Q Consensus 406 ~v~~l~~sp~~~~~l~-t~s~-----------dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg~~dg 472 (502)
....|.|.++| .+.+ |=.. .+.|..++..+++...+.. ......++.++|+||++.|+++.-.=|
T Consensus 477 sPDnL~fd~~G-~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~-~P~~aEpnGiafSPD~ktLfV~vQHPG 553 (592)
T 4a9v_A 477 SPDGLGFDKAG-RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV-GPIGCEVTGISFSPDQKTLFVGIQHPG 553 (592)
T ss_dssp CEEEEEECTTC-CEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEE-CCTTCEEEEEEECTTSSEEEEEEESTT
T ss_pred CCCceEECCCC-CEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEe-CCCCccccCCEECCCCCEEEEEEeCCC
Confidence 35678999987 5555 4221 1256777777777544432 223456899999999997666654333
No 389
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=26.74 E-value=3.6e+02 Score=24.47 Aligned_cols=246 Identities=8% Similarity=0.047 Sum_probs=125.3
Q ss_pred CCCCEEEEecCCCcEEEeeCCCCCCcCcceecCCcchhhhhhccccCCcccccccccCcccceeeEEeccCCCcEEEEEe
Q 010748 207 EKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS 286 (502)
Q Consensus 207 ~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs 286 (502)
|+..++++.+.+|.|+--.+...... ......+.. .+.+..+..... ...|+..+
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~-----------------------~~~~~~lke-~D~l~~~~~~~t-~d~ll~fT 57 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAAS-----------------------NGQDFAMKD-TDRLLAMLEMNT-KDVLLLFT 57 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHT-----------------------TTCCCCCCT-TCCEEEEEEEET-TSEEEEEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhc-----------------------CccccccCC-CCEEEEEEEECC-CCEEEEEE
Confidence 46778899999999987665321100 000111222 244444444444 34566667
Q ss_pred cCCcEEEEe---CCC------CeeeEee-c-cCCCCeEEEEEcCC--CCcEEEEEeCCCcEEEEecCCCCCc-------c
Q 010748 287 ADKQVKIWD---VAA------GKCNLTL-E-HHTDKVQAVAWNHH--SPQILLSGSFDRSVVMKDARISTHS-------G 346 (502)
Q Consensus 287 ~dg~v~vwd---~~~------~~~~~~~-~-~h~~~v~~l~~~~~--~~~~l~s~s~dg~i~iwd~~~~~~~-------~ 346 (502)
..|.+.-.. +.. |.++..+ . .....|.++..-+. ...+++.++..|.++...+...... .
T Consensus 58 ~~Gr~~~~~~~elp~~~r~a~G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~a 137 (323)
T 1wp5_A 58 NKGNYLYCPVHELPDIRWKDLGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTG 137 (323)
T ss_dssp TTSEEEEEEGGGSCBCCTTSCCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEEC
T ss_pred CCCEEEEEEHHHCcCCCCCCCCcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEE
Confidence 778765544 322 3322221 1 12345665533332 1257889999999999887532211 1
Q ss_pred ceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEEEEcCCCCCEEEEEeCC
Q 010748 347 FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD 426 (502)
Q Consensus 347 ~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~d 426 (502)
........+..+..... ...++..+.+|.+..|...................+. ....|.++...+.+...|++.+..
T Consensus 138 i~l~e~d~lv~~~~~~~-~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~-~~d~Vv~~~~~~~~~~~ll~vt~~ 215 (323)
T 1wp5_A 138 INLKNDDQVVDVHLTDG-MNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLK-EGDYIVSGQLITSKDESIVVATQR 215 (323)
T ss_dssp SCCCTTCCEEEEEEECS-CSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCC-TTCCEEEEEEECCTTCEEEEEETT
T ss_pred EEeCCCCEEEEEEEeCC-CCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeC-CCCEEEEEEEEcCCCcEEEEEECC
Confidence 11222345555544432 3368888899999888876432111110011122222 234456654444342278888899
Q ss_pred CcEEEEECCCCCe-----eEEEEe---cCCCCcEEE-EEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010748 427 KMVKLWDLSNNQP-----SCIASR---NPKAGAVFS-VAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 427 g~i~vwd~~~~~~-----~~~~~~---~~~~~~v~~-~~~spd~~~ll~sg~~dg~i~vwd~~~ 481 (502)
|..+..++..... .-+... ......+.. +.+.++.. ++..+..|.+....+..
T Consensus 216 G~gKr~~~~e~~~~~Rg~kGv~~~~~~~~~~~~l~~~~~v~~~~~--i~~it~~g~~ir~~~~~ 277 (323)
T 1wp5_A 216 GAVKKMKLTEFEKATRAKRGVVILRELKANPHRISGFVVAQDSDT--IYLQTEKSFIETIKVGD 277 (323)
T ss_dssp SEEEEEEGGGSCCCCTTSCCEECSCCCSSSCCCEEEEEEECTTCE--EEEEETTSCEEEEEGGG
T ss_pred CceEEEEHHHccccCCCCCCEECeeecCCCCceEEEEEEeCCCCe--EEEEeCCCeEEEEEhhh
Confidence 9988877644110 112222 122224553 34444443 44567778777777654
No 390
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=24.11 E-value=6e+02 Score=26.10 Aligned_cols=98 Identities=11% Similarity=0.086 Sum_probs=57.2
Q ss_pred CCCcEEEEecCCCC-------CccceEee--cCCeeEEEeCCCCCCEEEEEeCCCc--EEEEECCCCCCCCCCCCCccce
Q 010748 330 FDRSVVMKDARIST-------HSGFKWAV--AADVESLAWDPHAEHSFVVSLEDGT--IKGFDIRTAKSDPDSTSQQSSF 398 (502)
Q Consensus 330 ~dg~i~iwd~~~~~-------~~~~~~~~--~~~v~~v~~~~~~~~~~~~~~~dg~--v~i~d~~~~~~~~~~~~~~~~~ 398 (502)
..+.|.+.++..+. .......+ ...+..+.|..+ .++++...++. |.++++.++. ....
T Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~l~~~~~~~~~~~l~~~~~~~g~--------~~~~ 387 (711)
T 4hvt_A 318 KAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD--RVFLATYDNVVAKVVTFTLENEQ--------WTKP 387 (711)
T ss_dssp CTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS--CEEEEEEETTEEEEEEECEETTE--------ECCC
T ss_pred CCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC--EEEEEEEECCEEEEEEEECCCCc--------eEEE
Confidence 46789999987642 11112222 335778888874 47777777775 6667665431 0122
Q ss_pred E-Eecc-CCCeeEEEEcCCCCCEEEEEeC---CCcEEEEECCCCC
Q 010748 399 T-LHAH-DKAVCTISYNPLVPNLLATGST---DKMVKLWDLSNNQ 438 (502)
Q Consensus 399 ~-~~~h-~~~v~~l~~sp~~~~~l~t~s~---dg~i~vwd~~~~~ 438 (502)
. +... .+.+..+.+.+++..++++.+. -+.+..+|+. ++
T Consensus 388 ~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~ 431 (711)
T 4hvt_A 388 VVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT-HE 431 (711)
T ss_dssp EEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-SC
T ss_pred eccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-Cc
Confidence 2 2211 2456666777777667776654 3567888876 44
No 391
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=23.79 E-value=3.8e+02 Score=23.65 Aligned_cols=163 Identities=15% Similarity=0.070 Sum_probs=90.5
Q ss_pred ccceeeEEeccC-CCcEEEEEecCCcEEEEeCCCC------eeeEeeccCCCCeEEEEEcCCCCcEEEEEeCCCcEEEEe
Q 010748 266 TDSVLGLAWNKE-FRNILASASADKQVKIWDVAAG------KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKD 338 (502)
Q Consensus 266 ~~~V~~l~~~~~-~~~~l~sgs~dg~v~vwd~~~~------~~~~~~~~h~~~v~~l~~~~~~~~~l~s~s~dg~i~iwd 338 (502)
...|..+.. ++ ...+++..+..|.|+-..+..- .....+.. .+.+..+...... ..++..+..|.+..+.
T Consensus 67 ~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~-~~ill~T~~G~~~r~~ 143 (276)
T 3no0_A 67 EEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDE-THILLFTKKGRVARFS 143 (276)
T ss_dssp TCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSS-CEEEEEETTSEEEEEE
T ss_pred CCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCC-CEEEEEECCCEEEEEE
Confidence 345555533 31 2458889999999999886542 22233332 3556666555544 5788888899988887
Q ss_pred cCCCCCc--------cceEeecCCeeEEEeCCCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCccceEEeccCCCeeEE
Q 010748 339 ARISTHS--------GFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTI 410 (502)
Q Consensus 339 ~~~~~~~--------~~~~~~~~~v~~v~~~~~~~~~~~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 410 (502)
...-... .........|..+...+.+ ..++..+..|.++...+......... .+-+..+ .....+..+
T Consensus 144 ~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~-~~ll~~T~~G~~kr~~~~e~~~~~R~--gkGv~~i-~~~~~lv~~ 219 (276)
T 3no0_A 144 VREVPPSTPGARGVQGIKLEKNDETSGLRIWNGE-PYLLVITAKGRVKKISHEEIPKTNRG--VKGTEVS-GTKDTLVDL 219 (276)
T ss_dssp GGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSC-SEEEEEETTSCEEEEEGGGSCCCCTT--CCCEECC-CSSSCEEEE
T ss_pred hhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCC-CEEEEEeCCCcEEEeEHHHcccCCCC--CcceEEE-cCCCcEEEE
Confidence 5421110 0111223445555443333 37888899999998887654221111 1112222 223444444
Q ss_pred EEcCCCCCEEEEEeCCCcEEE--EECCC
Q 010748 411 SYNPLVPNLLATGSTDKMVKL--WDLSN 436 (502)
Q Consensus 411 ~~sp~~~~~l~t~s~dg~i~v--wd~~~ 436 (502)
..... ...++..+..|.+.. ++...
T Consensus 220 ~~~~~-~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 220 IPIKE-EVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp EEESS-EEEEEEEETTSCEEEEEEEGGG
T ss_pred EEeCC-CCEEEEEcCCCeEEEeeeCHHH
Confidence 33322 246666777787777 76643
No 392
>3nzj_F Proteasome component C1; ubiquitin, protein degradation, N-terminal nucleophilic HYDR 19S regulatory particle; HET: TY5 TRO MES; 2.40A {Saccharomyces cerevisiae} PDB: 1z7q_G* 3nzw_F* 3nzx_F* 3un4_F* 3un8_F* 4b4t_G 4g4s_G* 3bdm_F* 1fnt_G* 2zcy_F*
Probab=22.66 E-value=31 Score=31.18 Aligned_cols=34 Identities=12% Similarity=0.015 Sum_probs=15.1
Q ss_pred eeeccCCCCCcCCcccCCCCHHHHHHHHhccccccccc
Q 010748 5 VSWVPKGASKAVPEEAEPPSKEEIEEIINSGALEHEIE 42 (502)
Q Consensus 5 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 (502)
++||-+.- ..-....+ .++++++ .++.++..+++
T Consensus 216 v~vIt~~~--~~~~~~~v-p~~~~~~-~~~~~~~~~~~ 249 (288)
T 3nzj_F 216 ISWCSLSE--TNGLHKFV-KGDLLQE-AIDFAQKEING 249 (288)
T ss_dssp EEEEETTT--STTCCEEC-CHHHHHH-HHHHHHHHTC-
T ss_pred EEEEEecC--CCceEEEC-CHHHHHH-HHHHHHHHhhc
Confidence 67887611 11122334 4455555 34444544443
No 393
>4ftd_A Uncharacterized protein; 6-bladed-beta-propeller, immunoglobulin-like, carbohydrate metabolism, structural genomics; 1.91A {Bacteroides eggerthii}
Probab=20.27 E-value=5.8e+02 Score=24.46 Aligned_cols=216 Identities=14% Similarity=0.051 Sum_probs=99.9
Q ss_pred ccceeeEEeccCCCcEEEEEecCCcEEEEeC-------CCCee--e-EeeccCC--CCeEEEEEcCCCCcEEEEE---eC
Q 010748 266 TDSVLGLAWNKEFRNILASASADKQVKIWDV-------AAGKC--N-LTLEHHT--DKVQAVAWNHHSPQILLSG---SF 330 (502)
Q Consensus 266 ~~~V~~l~~~~~~~~~l~sgs~dg~v~vwd~-------~~~~~--~-~~~~~h~--~~v~~l~~~~~~~~~l~s~---s~ 330 (502)
....++..|..+ +.++....+..+..||- ..+.. + ....+-. ..+.++.-..++ +++++. ..
T Consensus 135 ~~~trG~~~~s~--~V~v~~r~~~~v~~~dHll~~~~~~ag~~~~~~l~~TGvsGgtf~~~m~a~~~G-~Iy~anLsg~~ 211 (453)
T 4ftd_A 135 TNYTRCASYDGE--HVLVVSRPTTPNFHTPHLLKVSDLKRGEIKPIMLDVTGVKGGTYDYNMGALING-HVYLSSLSGGK 211 (453)
T ss_dssp STTEEEEEECSS--EEEEEECCCTTTCCCSEEEEHHHHHTTCCCCEECCCTTCCCSSEEEEEEEEETT-EEEEEEEBCST
T ss_pred cccccccccCCc--eEEEEecCCceEEecccccchhhcccCcccccccccceeeccceEEEEEEecCC-CEEEEeccCCC
Confidence 345678888766 34444445555665652 11111 1 1111111 123445544555 555442 23
Q ss_pred CCcEEEEecCCCCCccce-Eee-----------cCCeeEEEeCCCCCCEEEEEeC-CCcEEEEECCCCCCCCCCCCCccc
Q 010748 331 DRSVVMKDARISTHSGFK-WAV-----------AADVESLAWDPHAEHSFVVSLE-DGTIKGFDIRTAKSDPDSTSQQSS 397 (502)
Q Consensus 331 dg~i~iwd~~~~~~~~~~-~~~-----------~~~v~~v~~~~~~~~~~~~~~~-dg~v~i~d~~~~~~~~~~~~~~~~ 397 (502)
.+.++||...+....... ... -+.-.++.-+.++..+++.+.. ...+..|.+..+...... ...+
T Consensus 212 gs~fkIYrW~~~ts~Pe~i~s~~v~~~~gTg~R~Gd~isv~GD~~gNa~I~~~~n~s~~~~rwtVtng~l~~~~--~~~v 289 (453)
T 4ftd_A 212 VSPFKIYYWETPTSNPEVIANINVGNIPGAGNRHGDNASYNIDENGNGFIFFGDNAATEFLKVPISGHKTVDIG--NIKV 289 (453)
T ss_dssp TSCEEEEEESSTTSCCEEEEEECGGGSTTCCSCBCSCCEEEECTTSCEEEEEEBTTSSEEEEEEEETTTEECGG--GCEE
T ss_pred CCceEEEEeCCCCCCceeEEEeccccCCcccccccceEEEEEcCCCCEEEEECCCCceeEEEEEEECCeEcCCC--Ccee
Confidence 456888877765433211 111 1223456666666555554433 335777877765221000 0111
Q ss_pred eEEeccCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCcEEEEEEcCCCCcEEEEE-eC------
Q 010748 398 FTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG-GS------ 470 (502)
Q Consensus 398 ~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ll~sg-~~------ 470 (502)
....+.......+.+--+-..++.++. .-...+++..... ..............-+.|.. .+|||++. +.
T Consensus 290 ~~~~~~g~~~~~v~~~gnT~~y~~sg~-~~p~~Ly~~~g~~-~~~sai~~~a~~~~vv~FN~-~rYLi~~~~~~~g~~~~ 366 (453)
T 4ftd_A 290 LPSKSDATMVTNVYRVGDTDQYLWSGI-RVPVTLVDESLGE-KYKSKIAGEAVAPKVVTFNE-ERYLLVCTAGQGAASKA 366 (453)
T ss_dssp EECCGGGCSSEEEEECTTSSCEEEEET-TEEEEEECTTCCE-EEECSCCTTEEEEEEEEETT-EEEEEEEECCBSTTCCC
T ss_pred eccCCCceeeeeeEEcCcccceeeccc-cCceeEEecCCCE-EEeeeccccCCCcceEEEcc-ccEEEEEEecccCccCC
Confidence 111222223444544433224555544 3356666665433 22211122222344555654 35666532 21
Q ss_pred CCcEEEEECCCCccccccc
Q 010748 471 KGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 471 dg~i~vwd~~~~~~~~~~~ 489 (502)
+..|+|||+.++..+...+
T Consensus 367 ~~~l~vYDIS~g~~~~~a~ 385 (453)
T 4ftd_A 367 SIALEVYDLTKGETIEDAL 385 (453)
T ss_dssp CCEEEEEECCSSSSHHHHH
T ss_pred CceEEEEECCCCcchhhhh
Confidence 2379999999988764443
Done!