Query 010750
Match_columns 502
No_of_seqs 145 out of 200
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 13:28:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010750.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010750hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fl2_A E3 ubiquitin-protein li 93.7 0.029 9.8E-07 47.9 2.5 40 5-52 53-98 (124)
2 2ecw_A Tripartite motif-contai 93.6 0.036 1.2E-06 43.2 2.6 44 5-51 20-69 (85)
3 4ayc_A E3 ubiquitin-protein li 93.3 0.032 1.1E-06 48.8 2.1 37 6-51 55-97 (138)
4 2ecy_A TNF receptor-associated 93.1 0.058 2E-06 41.0 3.1 38 5-50 16-59 (66)
5 1jm7_A BRCA1, breast cancer ty 93.0 0.054 1.9E-06 44.8 3.0 41 6-52 23-69 (112)
6 1g25_A CDK-activating kinase a 92.6 0.067 2.3E-06 40.5 2.8 38 5-50 4-52 (65)
7 3ztg_A E3 ubiquitin-protein li 92.6 0.052 1.8E-06 43.6 2.3 40 5-51 14-60 (92)
8 2ecv_A Tripartite motif-contai 92.5 0.063 2.2E-06 41.8 2.6 45 5-52 20-70 (85)
9 2csy_A Zinc finger protein 183 92.5 0.054 1.9E-06 42.8 2.2 39 5-52 16-60 (81)
10 3lrq_A E3 ubiquitin-protein li 92.4 0.043 1.5E-06 45.5 1.6 39 5-51 23-68 (100)
11 1e4u_A Transcriptional repress 92.4 0.083 2.8E-06 42.7 3.2 39 5-51 12-60 (78)
12 3l11_A E3 ubiquitin-protein li 92.2 0.051 1.7E-06 45.7 1.8 38 5-50 16-59 (115)
13 2djb_A Polycomb group ring fin 92.1 0.085 2.9E-06 40.8 2.9 38 4-50 15-59 (72)
14 2ysl_A Tripartite motif-contai 92.1 0.078 2.7E-06 40.6 2.6 40 5-50 21-66 (73)
15 1jm7_B BARD1, BRCA1-associated 92.0 0.065 2.2E-06 45.4 2.3 36 5-51 23-65 (117)
16 2ckl_B Ubiquitin ligase protei 92.0 0.069 2.4E-06 47.7 2.5 40 5-52 55-101 (165)
17 2yur_A Retinoblastoma-binding 91.9 0.072 2.5E-06 41.6 2.2 38 5-49 16-60 (74)
18 1t1h_A Gspef-atpub14, armadill 91.8 0.082 2.8E-06 41.2 2.4 38 6-51 10-53 (78)
19 2d8t_A Dactylidin, ring finger 91.7 0.077 2.6E-06 40.9 2.2 37 5-50 16-58 (71)
20 2ckl_A Polycomb group ring fin 91.7 0.085 2.9E-06 43.9 2.6 39 5-52 16-61 (108)
21 1z6u_A NP95-like ring finger p 91.6 0.078 2.7E-06 47.5 2.4 41 5-53 79-125 (150)
22 2y43_A E3 ubiquitin-protein li 91.5 0.095 3.2E-06 42.9 2.6 38 5-51 23-67 (99)
23 1iym_A EL5; ring-H2 finger, ub 91.3 0.12 4E-06 37.6 2.6 39 2-49 3-51 (55)
24 2egp_A Tripartite motif-contai 90.9 0.073 2.5E-06 41.3 1.3 45 5-51 13-63 (79)
25 1chc_A Equine herpes virus-1 r 90.7 0.091 3.1E-06 39.8 1.7 40 2-50 3-49 (68)
26 1v87_A Deltex protein 2; ring- 89.8 0.21 7.1E-06 41.7 3.3 47 14-69 59-105 (114)
27 1bor_A Transcription factor PM 89.8 0.12 4E-06 38.6 1.6 34 5-50 7-46 (56)
28 2ct2_A Tripartite motif protei 89.6 0.14 4.8E-06 40.3 2.0 40 5-50 16-65 (88)
29 2kiz_A E3 ubiquitin-protein li 89.6 0.16 5.4E-06 38.6 2.2 37 4-49 14-59 (69)
30 2ep4_A Ring finger protein 24; 89.3 0.15 5E-06 39.4 1.9 37 4-49 15-60 (74)
31 2ect_A Ring finger protein 126 89.1 0.17 5.7E-06 39.4 2.1 38 4-50 15-61 (78)
32 4ic3_A E3 ubiquitin-protein li 88.6 0.2 6.7E-06 39.4 2.2 32 5-49 25-63 (74)
33 1x4j_A Ring finger protein 38; 88.4 0.16 5.6E-06 39.4 1.5 36 5-49 24-68 (75)
34 2ea6_A Ring finger protein 4; 87.9 0.2 6.8E-06 37.6 1.7 27 14-49 38-64 (69)
35 2lbm_A Transcriptional regulat 87.9 0.27 9.3E-06 44.7 2.8 43 6-48 65-115 (142)
36 2ecg_A Baculoviral IAP repeat- 87.9 0.27 9.1E-06 38.6 2.5 33 5-50 26-65 (75)
37 3ql9_A Transcriptional regulat 87.8 0.27 9.3E-06 44.0 2.8 44 6-49 59-110 (129)
38 2ysj_A Tripartite motif-contai 87.8 0.28 9.7E-06 36.7 2.5 37 5-47 21-63 (63)
39 2ecj_A Tripartite motif-contai 87.6 0.43 1.5E-05 34.7 3.3 37 5-47 16-58 (58)
40 3ng2_A RNF4, snurf, ring finge 87.3 0.19 6.4E-06 38.1 1.2 29 14-51 33-61 (71)
41 2ecm_A Ring finger and CHY zin 87.1 0.22 7.7E-06 35.9 1.5 36 5-49 6-51 (55)
42 2yho_A E3 ubiquitin-protein li 86.7 0.32 1.1E-05 39.1 2.3 33 5-50 19-58 (79)
43 2xeu_A Ring finger protein 4; 86.5 0.26 9E-06 36.4 1.7 28 14-50 26-53 (64)
44 3hct_A TNF receptor-associated 86.4 0.21 7.2E-06 42.3 1.2 38 5-50 19-62 (118)
45 1rmd_A RAG1; V(D)J recombinati 85.6 0.34 1.2E-05 40.6 2.1 39 5-51 24-68 (116)
46 2c2l_A CHIP, carboxy terminus 85.1 0.31 1.1E-05 45.7 1.8 38 6-51 210-253 (281)
47 2l0b_A E3 ubiquitin-protein li 83.7 0.49 1.7E-05 38.4 2.1 36 5-49 41-85 (91)
48 3knv_A TNF receptor-associated 83.7 0.17 6E-06 44.8 -0.6 37 5-49 32-74 (141)
49 2ecn_A Ring finger protein 141 82.5 0.18 6.3E-06 38.4 -0.8 36 5-49 16-56 (70)
50 2ea5_A Cell growth regulator w 81.4 0.79 2.7E-05 35.8 2.5 33 4-49 15-54 (68)
51 3htk_C E3 SUMO-protein ligase 80.2 0.61 2.1E-05 46.5 1.8 55 5-72 182-245 (267)
52 2ecl_A Ring-box protein 2; RNF 79.6 0.86 2.9E-05 36.3 2.2 26 15-49 47-72 (81)
53 2vje_B MDM4 protein; proto-onc 78.6 1.1 3.8E-05 34.2 2.5 37 4-49 7-52 (63)
54 3a1b_A DNA (cytosine-5)-methyl 78.4 1.3 4.3E-05 41.2 3.2 45 5-49 80-133 (159)
55 2kre_A Ubiquitin conjugation f 78.4 0.99 3.4E-05 37.9 2.3 36 6-50 31-72 (100)
56 2kr4_A Ubiquitin conjugation f 78.1 0.95 3.2E-05 36.6 2.0 36 6-50 16-57 (85)
57 3dpl_R Ring-box protein 1; ubi 77.7 0.62 2.1E-05 39.7 0.8 27 14-49 71-97 (106)
58 4ap4_A E3 ubiquitin ligase RNF 77.6 0.85 2.9E-05 38.0 1.7 27 15-50 31-57 (133)
59 3u5n_A E3 ubiquitin-protein li 76.3 0.78 2.7E-05 42.9 1.2 41 5-50 8-54 (207)
60 3o36_A Transcription intermedi 76.0 0.78 2.7E-05 42.0 1.1 40 6-50 6-51 (184)
61 1wim_A KIAA0161 protein; ring 74.4 1 3.4E-05 36.6 1.2 44 6-50 7-61 (94)
62 2lri_C Autoimmune regulator; Z 73.9 1.7 5.7E-05 34.4 2.4 40 5-49 13-58 (66)
63 4a0k_B E3 ubiquitin-protein li 73.4 0.69 2.4E-05 40.4 0.0 26 15-49 83-108 (117)
64 1wgm_A Ubiquitin conjugation f 73.2 1.7 6E-05 36.2 2.4 36 6-50 24-66 (98)
65 3hcs_A TNF receptor-associated 72.1 1.2 4.1E-05 39.7 1.2 38 5-50 19-62 (170)
66 2pv0_B DNA (cytosine-5)-methyl 71.3 2.4 8.3E-05 44.1 3.5 45 5-49 94-147 (386)
67 4ap4_A E3 ubiquitin ligase RNF 70.3 1.7 5.8E-05 36.1 1.7 26 15-49 96-121 (133)
68 2vje_A E3 ubiquitin-protein li 67.7 2.3 7.9E-05 32.5 1.9 37 4-49 8-53 (64)
69 2ro1_A Transcription intermedi 65.4 2.1 7E-05 39.9 1.4 41 5-50 3-49 (189)
70 2yu4_A E3 SUMO-protein ligase 64.4 2.8 9.6E-05 34.3 1.9 41 6-49 9-58 (94)
71 3v43_A Histone acetyltransfera 62.1 4.1 0.00014 34.7 2.6 42 13-59 29-70 (112)
72 2f42_A STIP1 homology and U-bo 59.4 4.3 0.00015 37.9 2.3 38 6-51 108-151 (179)
73 2l5u_A Chromodomain-helicase-D 58.9 3.6 0.00012 31.7 1.4 40 5-49 12-57 (61)
74 1wil_A KIAA1045 protein; ring 57.9 4.7 0.00016 34.2 2.1 44 6-49 17-75 (89)
75 3vk6_A E3 ubiquitin-protein li 56.9 7.5 0.00026 33.7 3.2 29 13-49 17-45 (101)
76 1f62_A Transcription factor WS 56.7 5.5 0.00019 29.1 2.1 40 5-49 1-49 (51)
77 1mm2_A MI2-beta; PHD, zinc fin 55.5 3.5 0.00012 31.8 0.9 40 5-49 10-55 (61)
78 1fp0_A KAP-1 corepressor; PHD 53.3 4.5 0.00015 34.0 1.2 41 4-49 25-71 (88)
79 2ri7_A Nucleosome-remodeling f 49.7 3.7 0.00013 37.0 0.2 34 13-50 26-59 (174)
80 2ysm_A Myeloid/lymphoid or mix 46.0 8.6 0.00029 32.3 1.9 46 6-59 9-63 (111)
81 3v43_A Histone acetyltransfera 42.5 8.5 0.00029 32.7 1.3 31 14-49 81-111 (112)
82 2ku7_A MLL1 PHD3-CYP33 RRM chi 41.2 7.4 0.00025 32.4 0.7 38 12-49 4-43 (140)
83 3shb_A E3 ubiquitin-protein li 40.8 8.5 0.00029 31.3 1.0 10 40-49 66-76 (77)
84 2yql_A PHD finger protein 21A; 37.8 3 0.0001 31.4 -2.0 40 5-49 10-55 (56)
85 2lv9_A Histone-lysine N-methyl 34.9 12 0.00041 31.3 1.0 30 13-48 45-74 (98)
86 2o35_A Hypothetical protein DU 33.5 12 0.00041 32.5 0.8 18 18-35 41-58 (105)
87 1y02_A CARP2, FYVE-ring finger 32.8 10 0.00034 33.4 0.2 25 5-29 20-54 (120)
88 2puy_A PHD finger protein 21A; 32.6 6.7 0.00023 29.8 -0.8 39 5-48 6-50 (60)
89 3fyb_A Protein of unknown func 31.8 13 0.00046 32.2 0.8 17 18-34 40-56 (104)
90 1joc_A EEA1, early endosomal a 31.0 12 0.0004 32.8 0.3 26 4-29 69-104 (125)
91 2kwj_A Zinc finger protein DPF 30.8 12 0.00042 31.9 0.4 41 14-59 27-67 (114)
92 3asl_A E3 ubiquitin-protein li 30.0 19 0.00066 28.4 1.5 9 41-49 60-68 (70)
93 3lay_A Zinc resistance-associa 29.7 2.3E+02 0.0079 26.2 8.9 34 410-443 70-103 (175)
94 1weu_A Inhibitor of growth fam 29.4 12 0.00042 31.4 0.2 11 39-49 74-84 (91)
95 3gox_A Restriction endonucleas 29.2 32 0.0011 33.0 3.0 33 17-49 103-145 (200)
96 3t7l_A Zinc finger FYVE domain 29.1 12 0.00042 30.8 0.1 26 4-29 20-55 (90)
97 2ct0_A Non-SMC element 1 homol 28.6 37 0.0013 27.2 2.9 41 3-50 14-61 (74)
98 2yw8_A RUN and FYVE domain-con 28.4 13 0.00045 30.0 0.2 26 4-29 19-54 (82)
99 3lqh_A Histone-lysine N-methyl 27.8 21 0.0007 33.4 1.4 11 40-50 53-63 (183)
100 1z2q_A LM5-1; membrane protein 27.6 15 0.00053 29.7 0.5 26 4-29 21-56 (84)
101 2e6s_A E3 ubiquitin-protein li 27.5 18 0.00062 29.2 0.9 9 41-49 68-76 (77)
102 1xwh_A Autoimmune regulator; P 27.2 8.6 0.00029 29.9 -1.1 39 5-48 9-53 (66)
103 1wev_A Riken cDNA 1110020M19; 27.2 4.8 0.00016 33.2 -2.7 44 5-49 17-71 (88)
104 1x4u_A Zinc finger, FYVE domai 27.1 12 0.00042 30.3 -0.2 26 4-29 14-49 (84)
105 2a20_A Regulating synaptic mem 26.7 17 0.00057 29.0 0.5 42 2-48 7-58 (62)
106 1vfy_A Phosphatidylinositol-3- 26.1 15 0.00052 29.0 0.2 25 5-29 12-46 (73)
107 2k16_A Transcription initiatio 26.0 24 0.0008 27.7 1.3 40 5-49 19-67 (75)
108 1wfk_A Zinc finger, FYVE domai 25.4 13 0.00045 30.7 -0.3 26 4-29 9-44 (88)
109 3lay_A Zinc resistance-associa 25.3 3.7E+02 0.013 24.8 9.4 39 380-419 65-104 (175)
110 2e6r_A Jumonji/ARID domain-con 23.2 9.6 0.00033 31.7 -1.6 39 6-49 18-65 (92)
111 4gne_A Histone-lysine N-methyl 22.3 25 0.00086 30.3 0.8 43 6-59 17-67 (107)
112 3hfh_A Transcription elongatio 21.9 2.5E+02 0.0086 25.5 7.6 35 347-398 23-57 (190)
113 1wen_A Inhibitor of growth fam 21.4 18 0.00063 28.7 -0.2 11 39-49 54-64 (71)
No 1
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=93.71 E-value=0.029 Score=47.91 Aligned_cols=40 Identities=23% Similarity=0.597 Sum_probs=30.3
Q ss_pred hhcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCCccc
Q 010750 5 AACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGICN 52 (502)
Q Consensus 5 ~sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgiCN 52 (502)
..|.+|.. .-.|++.||..||..... .....||.||....
T Consensus 53 ~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~--------~~~~~CP~Cr~~~~ 98 (124)
T 3fl2_A 53 FQCICCQELVFRPITTVCQHNVCKDCLDRSFR--------AQVFSCPACRYDLG 98 (124)
T ss_dssp TBCTTTSSBCSSEEECTTSCEEEHHHHHHHHH--------TTCCBCTTTCCBCC
T ss_pred CCCCcCChHHcCcEEeeCCCcccHHHHHHHHh--------HCcCCCCCCCccCC
Confidence 35888874 256999999999997763 34458999997553
No 2
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=93.56 E-value=0.036 Score=43.23 Aligned_cols=44 Identities=27% Similarity=0.543 Sum_probs=31.2
Q ss_pred hhcccCccc------cccccccchhHHhhhhccCHHHhhcCCCccCCCCCCcc
Q 010750 5 AACKIMKKD------KYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGIC 51 (502)
Q Consensus 5 ~sChqcr~~------~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgiC 51 (502)
..|.+|... ..|++.||..|+...+.... .......||.||..-
T Consensus 20 ~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~---~~~~~~~CP~Cr~~~ 69 (85)
T 2ecw_A 20 VTCPICLELLKEPVSADCNHSFCRACITLNYESNR---NTDGKGNCPVCRVPY 69 (85)
T ss_dssp TSCTTTCSCCSSCEECTTSCCBCHHHHHHHHHHSB---CTTSCBCCTTTCCCC
T ss_pred CCCcCCChhhCcceeCCCCCHHHHHHHHHHHHhcc---CCCCCCCCCCCCCcC
Confidence 468888742 45999999999997663221 123478999998754
No 3
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=93.30 E-value=0.032 Score=48.78 Aligned_cols=37 Identities=27% Similarity=0.630 Sum_probs=27.8
Q ss_pred hcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCCcc
Q 010750 6 ACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGIC 51 (502)
Q Consensus 6 sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgiC 51 (502)
.|.+|.. --.|++.||..|+...+. ....||.||..-
T Consensus 55 ~C~iC~~~~~~~~~~~CgH~fc~~Ci~~~~~---------~~~~CP~Cr~~~ 97 (138)
T 4ayc_A 55 QCIICSEYFIEAVTLNCAHSFCSYCINEWMK---------RKIECPICRKDI 97 (138)
T ss_dssp BCTTTCSBCSSEEEETTSCEEEHHHHHHHTT---------TCSBCTTTCCBC
T ss_pred CCcccCcccCCceECCCCCCccHHHHHHHHH---------cCCcCCCCCCcC
Confidence 5888884 256999999999986553 235799998743
No 4
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.12 E-value=0.058 Score=40.98 Aligned_cols=38 Identities=18% Similarity=0.530 Sum_probs=28.5
Q ss_pred hhcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCCc
Q 010750 5 AACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGI 50 (502)
Q Consensus 5 ~sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgi 50 (502)
..|.+|.. ...|++.||..|+..... .....||.||..
T Consensus 16 ~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~--------~~~~~CP~Cr~~ 59 (66)
T 2ecy_A 16 YKCEKCHLVLCSPKQTECGHRFCESCMAALLS--------SSSPKCTACQES 59 (66)
T ss_dssp EECTTTCCEESSCCCCSSSCCCCHHHHHHHHT--------TSSCCCTTTCCC
T ss_pred CCCCCCChHhcCeeECCCCCHHHHHHHHHHHH--------hCcCCCCCCCcC
Confidence 35777773 256999999999998763 345689999863
No 5
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=93.04 E-value=0.054 Score=44.77 Aligned_cols=41 Identities=27% Similarity=0.626 Sum_probs=30.1
Q ss_pred hcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCCccc
Q 010750 6 ACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGICN 52 (502)
Q Consensus 6 sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgiCN 52 (502)
.|.+|.. -..|++.||..|+....... .....||.||....
T Consensus 23 ~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~------~~~~~CP~Cr~~~~ 69 (112)
T 1jm7_A 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLLNQK------KGPSQCPLCKNDIT 69 (112)
T ss_dssp SCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSS------SSSCCCTTTSCCCC
T ss_pred CCcccChhhcCeEECCCCCHHHHHHHHHHHHhC------CCCCCCcCCCCcCC
Confidence 6888874 24699999999999776422 23468999987543
No 6
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=92.62 E-value=0.067 Score=40.50 Aligned_cols=38 Identities=24% Similarity=0.573 Sum_probs=28.0
Q ss_pred hhcccCcc----c-------cccccccchhHHhhhhccCHHHhhcCCCccCCCCCCc
Q 010750 5 AACKIMKK----D-------KYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGI 50 (502)
Q Consensus 5 ~sChqcr~----~-------~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgi 50 (502)
..|.+|.. . ..|++.||..|+...+. .....||.||..
T Consensus 4 ~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~--------~~~~~CP~Cr~~ 52 (65)
T 1g25_A 4 QGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFV--------RGAGNCPECGTP 52 (65)
T ss_dssp TCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHH--------TTSSSCTTTCCC
T ss_pred CcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHH--------cCCCcCCCCCCc
Confidence 35777776 2 36999999999987653 234689999874
No 7
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=92.59 E-value=0.052 Score=43.64 Aligned_cols=40 Identities=25% Similarity=0.512 Sum_probs=29.1
Q ss_pred hhcccCcc------ccc-cccccchhHHhhhhccCHHHhhcCCCccCCCCCCcc
Q 010750 5 AACKIMKK------DKY-CPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGIC 51 (502)
Q Consensus 5 ~sChqcr~------~~~-C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgiC 51 (502)
-.|.+|.. --. |++.||..||...+. ......||.||...
T Consensus 14 ~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~-------~~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 14 LLCLICKDIMTDAVVIPCCGNSYCDECIRTALL-------ESDEHTCPTCHQND 60 (92)
T ss_dssp TEETTTTEECSSCEECTTTCCEECHHHHHHHHH-------HCTTCCCTTTCCSS
T ss_pred CCCCCCChhhcCceECCCCCCHHHHHHHHHHHH-------hcCCCcCcCCCCcC
Confidence 46888874 134 999999999997763 22346899998753
No 8
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.53 E-value=0.063 Score=41.77 Aligned_cols=45 Identities=24% Similarity=0.448 Sum_probs=31.5
Q ss_pred hhcccCccc------cccccccchhHHhhhhccCHHHhhcCCCccCCCCCCccc
Q 010750 5 AACKIMKKD------KYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGICN 52 (502)
Q Consensus 5 ~sChqcr~~------~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgiCN 52 (502)
..|.+|... -.|++.||..|+...+.... .......||.||..-.
T Consensus 20 ~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~---~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecv_A 20 VTCPICLELLTQPLSLDCGHSFCQACLTANHKKSM---LDKGESSCPVCRISYQ 70 (85)
T ss_dssp CCCTTTCSCCSSCBCCSSSCCBCTTHHHHHHHHHH---HTTSCCCCTTTCCSSC
T ss_pred CCCCCCCcccCCceeCCCCCHHHHHHHHHHHHHhh---cCCCCCcCCCCCCccC
Confidence 468888742 46999999999997764311 1344678999987543
No 9
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.48 E-value=0.054 Score=42.76 Aligned_cols=39 Identities=23% Similarity=0.541 Sum_probs=29.9
Q ss_pred hhcccCccc------cccccccchhHHhhhhccCHHHhhcCCCccCCCCCCccc
Q 010750 5 AACKIMKKD------KYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGICN 52 (502)
Q Consensus 5 ~sChqcr~~------~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgiCN 52 (502)
..|.+|... ..|++.||..|+..++.. ...||.||..-+
T Consensus 16 ~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~---------~~~CP~Cr~~~~ 60 (81)
T 2csy_A 16 FRCFICRQAFQNPVVTKCRHYFCESCALEHFRA---------TPRCYICDQPTG 60 (81)
T ss_dssp SBCSSSCSBCCSEEECTTSCEEEHHHHHHHHHH---------CSBCSSSCCBCC
T ss_pred CCCcCCCchhcCeeEccCCCHhHHHHHHHHHHC---------CCcCCCcCcccc
Confidence 468888742 569999999999987731 458999998654
No 10
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=92.44 E-value=0.043 Score=45.50 Aligned_cols=39 Identities=26% Similarity=0.546 Sum_probs=29.6
Q ss_pred hhcccCcc-------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCCcc
Q 010750 5 AACKIMKK-------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGIC 51 (502)
Q Consensus 5 ~sChqcr~-------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgiC 51 (502)
..|.+|.. ...|++.||..||..++... ...||.||..-
T Consensus 23 ~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~~--------~~~CP~Cr~~~ 68 (100)
T 3lrq_A 23 FRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQ--------RAQCPHCRAPL 68 (100)
T ss_dssp TBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHHT--------CSBCTTTCCBC
T ss_pred CCCccCCccccCccccCCCCChhhHHHHHHHHHHC--------cCCCCCCCCcC
Confidence 46888874 26799999999999776322 26899999854
No 11
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=92.43 E-value=0.083 Score=42.73 Aligned_cols=39 Identities=21% Similarity=0.463 Sum_probs=27.9
Q ss_pred hhcccCcccc--c--------cccccchhHHhhhhccCHHHhhcCCCccCCCCCCcc
Q 010750 5 AACKIMKKDK--Y--------CPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGIC 51 (502)
Q Consensus 5 ~sChqcr~~~--~--------C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgiC 51 (502)
.+|-+|-..- . |++.||..|+.+... .....||.||..-
T Consensus 12 ~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~~--------~~~~~CP~CR~~~ 60 (78)
T 1e4u_A 12 VECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRT--------DENGLCPACRKPY 60 (78)
T ss_dssp CBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHTT--------SSCSBCTTTCCBC
T ss_pred CcCCccCccCccccccccccCCCCCcCHHHHHHHHh--------cCCCCCCCCCCcc
Confidence 3677777421 2 999999999986542 2467899999743
No 12
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=92.20 E-value=0.051 Score=45.67 Aligned_cols=38 Identities=24% Similarity=0.573 Sum_probs=28.2
Q ss_pred hhcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCCc
Q 010750 5 AACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGI 50 (502)
Q Consensus 5 ~sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgi 50 (502)
..|.+|.. .-.|++.||..||..+.. .....||.||..
T Consensus 16 ~~C~iC~~~~~~p~~~~CgH~fC~~Ci~~~~~--------~~~~~CP~Cr~~ 59 (115)
T 3l11_A 16 CQCGICMEILVEPVTLPCNHTLCKPCFQSTVE--------KASLCCPFCRRR 59 (115)
T ss_dssp HBCTTTCSBCSSCEECTTSCEECHHHHCCCCC--------TTTSBCTTTCCB
T ss_pred CCCccCCcccCceeEcCCCCHHhHHHHHHHHh--------HCcCCCCCCCcc
Confidence 46888874 246999999999987663 234689988873
No 13
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.14 E-value=0.085 Score=40.79 Aligned_cols=38 Identities=26% Similarity=0.696 Sum_probs=28.9
Q ss_pred hhhcccCccc-------cccccccchhHHhhhhccCHHHhhcCCCccCCCCCCc
Q 010750 4 VAACKIMKKD-------KYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGI 50 (502)
Q Consensus 4 ~~sChqcr~~-------~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgi 50 (502)
...|.+|... ..|++.||..|+..++.. ...||.||..
T Consensus 15 ~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~---------~~~CP~Cr~~ 59 (72)
T 2djb_A 15 YILCSICKGYLIDATTITECLHTFCKSCIVRHFYY---------SNRCPKCNIV 59 (72)
T ss_dssp GGSCTTTSSCCSSCEECSSSCCEECHHHHHHHHHH---------CSSCTTTCCC
T ss_pred CCCCCCCChHHHCcCEECCCCCHHHHHHHHHHHHc---------CCcCCCcCcc
Confidence 3568888741 379999999999987732 3589999874
No 14
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.12 E-value=0.078 Score=40.61 Aligned_cols=40 Identities=25% Similarity=0.546 Sum_probs=29.2
Q ss_pred hhcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCCc
Q 010750 5 AACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGI 50 (502)
Q Consensus 5 ~sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgi 50 (502)
..|.+|.. .-.|++.||..|+...+.. ......||.||..
T Consensus 21 ~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~------~~~~~~CP~Cr~~ 66 (73)
T 2ysl_A 21 VICPICLDILQKPVTIDCGHNFCLKCITQIGET------SCGFFKCPLCKTS 66 (73)
T ss_dssp CBCTTTCSBCSSEEECTTCCEEEHHHHHHHCSS------SCSCCCCSSSCCC
T ss_pred CEeccCCcccCCeEEcCCCChhhHHHHHHHHHc------CCCCCCCCCCCCc
Confidence 46888874 2469999999999977631 1345689999864
No 15
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=92.02 E-value=0.065 Score=45.44 Aligned_cols=36 Identities=25% Similarity=0.570 Sum_probs=28.4
Q ss_pred hhcccCcc------cc-ccccccchhHHhhhhccCHHHhhcCCCccCCCCCCcc
Q 010750 5 AACKIMKK------DK-YCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGIC 51 (502)
Q Consensus 5 ~sChqcr~------~~-~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgiC 51 (502)
..|.+|.. -. .|++.||..|+..... ..||.||...
T Consensus 23 ~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~-----------~~CP~Cr~~~ 65 (117)
T 1jm7_B 23 LRCSRCTNILREPVCLGGCEHIFCSNCVSDCIG-----------TGCPVCYTPA 65 (117)
T ss_dssp TSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTT-----------TBCSSSCCBC
T ss_pred CCCCCCChHhhCccEeCCCCCHHHHHHHHHHhc-----------CCCcCCCCcC
Confidence 46888884 13 7999999999987763 5799999864
No 16
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=92.01 E-value=0.069 Score=47.69 Aligned_cols=40 Identities=28% Similarity=0.633 Sum_probs=30.5
Q ss_pred hhcccCccc-------cccccccchhHHhhhhccCHHHhhcCCCccCCCCCCccc
Q 010750 5 AACKIMKKD-------KYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGICN 52 (502)
Q Consensus 5 ~sChqcr~~-------~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgiCN 52 (502)
..|.+|..- ..|++.||..|+..... .....||.||....
T Consensus 55 ~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~--------~~~~~CP~Cr~~~~ 101 (165)
T 2ckl_B 55 LMCPICLDMLKNTMTTKECLHRFCADCIITALR--------SGNKECPTCRKKLV 101 (165)
T ss_dssp HBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHH--------TTCCBCTTTCCBCC
T ss_pred CCCcccChHhhCcCEeCCCCChhHHHHHHHHHH--------hCcCCCCCCCCcCC
Confidence 379999841 37999999999997763 23578999998653
No 17
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=91.87 E-value=0.072 Score=41.60 Aligned_cols=38 Identities=29% Similarity=0.648 Sum_probs=28.3
Q ss_pred hhcccCcc------ccc-cccccchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 5 AACKIMKK------DKY-CPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 5 ~sChqcr~------~~~-C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
..|.+|.. ... |++.||..||..++.. .....||.||.
T Consensus 16 ~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~-------~~~~~CP~Cr~ 60 (74)
T 2yur_A 16 LLCLICKDIMTDAVVIPCCGNSYCDECIRTALLE-------SDEHTCPTCHQ 60 (74)
T ss_dssp GSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHH-------SSSSCCSSSCC
T ss_pred CCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHh-------cCCCcCCCCCC
Confidence 46888874 134 9999999999987732 23468999987
No 18
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=91.76 E-value=0.082 Score=41.21 Aligned_cols=38 Identities=11% Similarity=0.170 Sum_probs=28.5
Q ss_pred hcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCCcc
Q 010750 6 ACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGIC 51 (502)
Q Consensus 6 sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgiC 51 (502)
.|.+|.. -..|++.||..|+...+. .....||.||..-
T Consensus 10 ~C~IC~~~~~~Pv~~~CgH~fc~~Ci~~~~~--------~~~~~CP~C~~~~ 53 (78)
T 1t1h_A 10 RCPISLELMKDPVIVSTGQTYERSSIQKWLD--------AGHKTCPKSQETL 53 (78)
T ss_dssp SCTTTSCCCSSEEEETTTEEEEHHHHHHHHT--------TTCCBCTTTCCBC
T ss_pred CCCCccccccCCEEcCCCCeecHHHHHHHHH--------HCcCCCCCCcCCC
Confidence 5777774 246999999999997763 2356899998743
No 19
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.72 E-value=0.077 Score=40.94 Aligned_cols=37 Identities=27% Similarity=0.520 Sum_probs=27.5
Q ss_pred hhcccCccc------cccccccchhHHhhhhccCHHHhhcCCCccCCCCCCc
Q 010750 5 AACKIMKKD------KYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGI 50 (502)
Q Consensus 5 ~sChqcr~~------~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgi 50 (502)
..|.+|... ..|++.||..|+...+.. ...||.||..
T Consensus 16 ~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~---------~~~CP~Cr~~ 58 (71)
T 2d8t_A 16 PECAICLQTCVHPVSLPCKHVFCYLCVKGASWL---------GKRCALCRQE 58 (71)
T ss_dssp CBCSSSSSBCSSEEEETTTEEEEHHHHHHCTTC---------SSBCSSSCCB
T ss_pred CCCccCCcccCCCEEccCCCHHHHHHHHHHHHC---------CCcCcCcCch
Confidence 458888742 459999999999876532 2689999864
No 20
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=91.71 E-value=0.085 Score=43.90 Aligned_cols=39 Identities=21% Similarity=0.508 Sum_probs=29.4
Q ss_pred hhcccCccc-------cccccccchhHHhhhhccCHHHhhcCCCccCCCCCCccc
Q 010750 5 AACKIMKKD-------KYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGICN 52 (502)
Q Consensus 5 ~sChqcr~~-------~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgiCN 52 (502)
..|.+|..- ..|++.||..|+...... ...||.||....
T Consensus 16 ~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~---------~~~CP~Cr~~~~ 61 (108)
T 2ckl_A 16 LMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET---------SKYCPICDVQVH 61 (108)
T ss_dssp TBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHTS---------CSBCTTTCCBSC
T ss_pred CCCccCChHHhCcCEeCCCCChhhHHHHHHHHHh---------CCcCcCCCcccc
Confidence 468888842 389999999999987643 257999887543
No 21
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=91.63 E-value=0.078 Score=47.50 Aligned_cols=41 Identities=22% Similarity=0.560 Sum_probs=30.7
Q ss_pred hhcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCCcccC
Q 010750 5 AACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGICNC 53 (502)
Q Consensus 5 ~sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgiCNC 53 (502)
..|.+|.. ...|++.||..||...+. .....||.||....-
T Consensus 79 ~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~--------~~~~~CP~Cr~~~~~ 125 (150)
T 1z6u_A 79 FMCVCCQELVYQPVTTECFHNVCKDCLQRSFK--------AQVFSCPACRHDLGQ 125 (150)
T ss_dssp TBCTTTSSBCSSEEECTTSCEEEHHHHHHHHH--------TTCCBCTTTCCBCCT
T ss_pred CEeecCChhhcCCEEcCCCCchhHHHHHHHHH--------hCCCcCCCCCccCCC
Confidence 36888884 256999999999987763 234579999986543
No 22
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=91.47 E-value=0.095 Score=42.86 Aligned_cols=38 Identities=21% Similarity=0.502 Sum_probs=28.4
Q ss_pred hhcccCccc-------cccccccchhHHhhhhccCHHHhhcCCCccCCCCCCcc
Q 010750 5 AACKIMKKD-------KYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGIC 51 (502)
Q Consensus 5 ~sChqcr~~-------~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgiC 51 (502)
..|.+|..- ..|++.||..|+...... ...||.||...
T Consensus 23 ~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~---------~~~CP~Cr~~~ 67 (99)
T 2y43_A 23 LRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSY---------KTQCPTCCVTV 67 (99)
T ss_dssp TBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTT---------CCBCTTTCCBC
T ss_pred CCcccCChhhCCcCEECCCCCHhhHHHHHHHHHC---------CCCCCCCCCcC
Confidence 468888841 379999999999877642 35899888753
No 23
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=91.26 E-value=0.12 Score=37.57 Aligned_cols=39 Identities=26% Similarity=0.496 Sum_probs=28.2
Q ss_pred chhhhcccCccc----------cccccccchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 2 DFVAACKIMKKD----------KYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 2 df~~sChqcr~~----------~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
|-...|.+|... ..|++.||..||..... ....||.||.
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~---------~~~~CP~Cr~ 51 (55)
T 1iym_A 3 DDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLG---------SHSTCPLCRL 51 (55)
T ss_dssp CCSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTT---------TCCSCSSSCC
T ss_pred CCCCcCccCCccccCCCceEECCCCCCcccHHHHHHHHH---------cCCcCcCCCC
Confidence 445678888731 24999999999986652 2457999985
No 24
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=90.94 E-value=0.073 Score=41.31 Aligned_cols=45 Identities=20% Similarity=0.439 Sum_probs=30.4
Q ss_pred hhcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCCcc
Q 010750 5 AACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGIC 51 (502)
Q Consensus 5 ~sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgiC 51 (502)
..|.+|.. --.|++.||..|+...+..... .......||.||..-
T Consensus 13 ~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~~~~--~~~~~~~CP~Cr~~~ 63 (79)
T 2egp_A 13 VTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVT--SMGGKSSCPVCGISY 63 (79)
T ss_dssp CEETTTTEECSSCCCCSSSCCCCHHHHSCCCCCCSS--SCCCCCCCSSSCCCC
T ss_pred CCCcCCCcccCCeeECCCCCHHHHHHHHHHHHhccc--CCCCCCcCCCCCCcC
Confidence 45888873 2459999999999976643211 113466899998754
No 25
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=90.71 E-value=0.091 Score=39.80 Aligned_cols=40 Identities=25% Similarity=0.552 Sum_probs=28.8
Q ss_pred chhhhcccCccc-------cccccccchhHHhhhhccCHHHhhcCCCccCCCCCCc
Q 010750 2 DFVAACKIMKKD-------KYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGI 50 (502)
Q Consensus 2 df~~sChqcr~~-------~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgi 50 (502)
+....|.+|... ..|++.||..|+...... ...||.||..
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~~~---------~~~CP~Cr~~ 49 (68)
T 1chc_A 3 TVAERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQ---------NPTCPLCKVP 49 (68)
T ss_dssp CCCCCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHH---------SCSTTTTCCC
T ss_pred CCCCCCeeCCccccCCcEecCCCCeeHHHHHHHHHhC---------cCcCcCCChh
Confidence 345678888741 459999999999876521 2489999864
No 26
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=89.84 E-value=0.21 Score=41.66 Aligned_cols=47 Identities=32% Similarity=0.620 Sum_probs=31.9
Q ss_pred cccccccchhHHhhhhccCHHHhhcCCCccCCCCCCcccCccccccCCCCCchHHH
Q 010750 14 KYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGICNCSLCMKKRGHQPTGQLV 69 (502)
Q Consensus 14 ~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgiCNCS~Crrk~G~~PTG~l~ 69 (502)
..|++.||..||..... .-.......||.||..- ..+.|..|.|.+.
T Consensus 59 ~~C~H~Fh~~Ci~~wl~----~~~~~~~~~CP~CR~~~-----~~~~g~qp~g~m~ 105 (114)
T 1v87_A 59 TKCSHAFHLLCLLAMYC----NGNKDGSLQCPSCKTIY-----GEKTGTQPWGKME 105 (114)
T ss_dssp SSSCCEECHHHHHHHHH----HTCCSSCCBCTTTCCBS-----SSCSSSCTTSSCC
T ss_pred CCCCCcccHHHHHHHHH----cccCCCCCcCCCCCCcc-----CCCCCCCCCCeEE
Confidence 45999999999997651 11123466899999743 2446777888653
No 27
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=89.81 E-value=0.12 Score=38.60 Aligned_cols=34 Identities=26% Similarity=0.651 Sum_probs=24.9
Q ss_pred hhcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCCc
Q 010750 5 AACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGI 50 (502)
Q Consensus 5 ~sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgi 50 (502)
..|.+|.. --.|++.||..|+.. ....||.||..
T Consensus 7 ~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~------------~~~~CP~Cr~~ 46 (56)
T 1bor_A 7 LRCQQCQAEAKCPKLLPCLHTLCSGCLEA------------SGMQCPICQAP 46 (56)
T ss_dssp SSCSSSCSSCBCCSCSTTSCCSBTTTCSS------------SSSSCSSCCSS
T ss_pred CCceEeCCccCCeEEcCCCCcccHHHHcc------------CCCCCCcCCcE
Confidence 35777874 245999999999976 24478888763
No 28
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.61 E-value=0.14 Score=40.33 Aligned_cols=40 Identities=28% Similarity=0.689 Sum_probs=28.6
Q ss_pred hhcccCccc----------cccccccchhHHhhhhccCHHHhhcCCCccCCCCCCc
Q 010750 5 AACKIMKKD----------KYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGI 50 (502)
Q Consensus 5 ~sChqcr~~----------~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgi 50 (502)
..|.+|... ..|++.||..|+....... .....||.||..
T Consensus 16 ~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~------~~~~~CP~Cr~~ 65 (88)
T 2ct2_A 16 LECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASS------INGVRCPFCSKI 65 (88)
T ss_dssp CBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHC------SSCBCCTTTCCC
T ss_pred CCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcC------CCCcCCCCCCCc
Confidence 357778731 2499999999999776321 235789999875
No 29
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=89.59 E-value=0.16 Score=38.63 Aligned_cols=37 Identities=24% Similarity=0.416 Sum_probs=26.7
Q ss_pred hhhcccCcc---------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 4 VAACKIMKK---------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 4 ~~sChqcr~---------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
...|.+|.. ...|++.||..||...... ...||.||.
T Consensus 14 ~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~---------~~~CP~Cr~ 59 (69)
T 2kiz_A 14 EEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLIT---------NKKCPICRV 59 (69)
T ss_dssp CCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHH---------CSBCTTTCS
T ss_pred CCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHc---------CCCCcCcCc
Confidence 356888853 1459999999999876532 236999885
No 30
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.33 E-value=0.15 Score=39.36 Aligned_cols=37 Identities=27% Similarity=0.539 Sum_probs=27.0
Q ss_pred hhhcccCccc------c---ccccccchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 4 VAACKIMKKD------K---YCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 4 ~~sChqcr~~------~---~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
...|.+|... . .|++.||..|+...... ...||.||.
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~---------~~~CP~Cr~ 60 (74)
T 2ep4_A 15 HELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEV---------RKVCPLCNM 60 (74)
T ss_dssp SCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHH---------CSBCTTTCC
T ss_pred CCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHc---------CCcCCCcCc
Confidence 4578888742 2 69999999999876521 237999885
No 31
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=89.15 E-value=0.17 Score=39.44 Aligned_cols=38 Identities=26% Similarity=0.557 Sum_probs=27.9
Q ss_pred hhhcccCccc---------cccccccchhHHhhhhccCHHHhhcCCCccCCCCCCc
Q 010750 4 VAACKIMKKD---------KYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGI 50 (502)
Q Consensus 4 ~~sChqcr~~---------~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgi 50 (502)
...|.+|... -.|++.||..||..++. ....||.||..
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~---------~~~~CP~Cr~~ 61 (78)
T 2ect_A 15 GLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLE---------QHDSCPVCRKS 61 (78)
T ss_dssp SCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHT---------TTCSCTTTCCC
T ss_pred CCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHH---------cCCcCcCcCCc
Confidence 3578888631 26999999999997652 23589999874
No 32
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=88.64 E-value=0.2 Score=39.44 Aligned_cols=32 Identities=28% Similarity=0.563 Sum_probs=25.5
Q ss_pred hhcccCccc------cccccc-cchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 5 AACKIMKKD------KYCPIK-FCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 5 ~sChqcr~~------~~C~~~-fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
..|.+|... -.|++. ||..|+... +.||.||.
T Consensus 25 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~-------------~~CP~Cr~ 63 (74)
T 4ic3_A 25 KLCKICMDRNIAIVFVPCGHLVTCKQCAEAV-------------DKCPMCYT 63 (74)
T ss_dssp TBCTTTSSSBCCEEEETTCCBCCCHHHHTTC-------------SBCTTTCC
T ss_pred CCCCCCCCCCCCEEEcCCCChhHHHHhhhcC-------------ccCCCcCc
Confidence 468888742 469999 999998854 78999996
No 33
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.39 E-value=0.16 Score=39.39 Aligned_cols=36 Identities=25% Similarity=0.528 Sum_probs=26.6
Q ss_pred hhcccCcc---------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 5 AACKIMKK---------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 5 ~sChqcr~---------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
..|.+|.. .-.|++.||..|+...... ...||.||.
T Consensus 24 ~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~---------~~~CP~Cr~ 68 (75)
T 1x4j_A 24 TLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKA---------NRTCPICRA 68 (75)
T ss_dssp CEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHH---------CSSCTTTCC
T ss_pred CCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHc---------CCcCcCcCC
Confidence 46888873 1349999999999976531 248999985
No 34
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.90 E-value=0.2 Score=37.59 Aligned_cols=27 Identities=33% Similarity=0.860 Sum_probs=21.3
Q ss_pred cccccccchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 14 KYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 14 ~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
..|++.||..|+...... ...||.||.
T Consensus 38 ~~CgH~fc~~Ci~~~~~~---------~~~CP~Cr~ 64 (69)
T 2ea6_A 38 TECGHVFCSQCLRDSLKN---------ANTCPTCRK 64 (69)
T ss_dssp CSSSCEEEHHHHHHHHHH---------CSSCTTTCC
T ss_pred CCCCChhcHHHHHHHHHc---------CCCCCCCCC
Confidence 359999999999977632 348999985
No 35
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=87.87 E-value=0.27 Score=44.68 Aligned_cols=43 Identities=28% Similarity=0.763 Sum_probs=32.3
Q ss_pred hcccCcc------ccccccccchhHHhhhhccCH-HHh-hcCCCccCCCCC
Q 010750 6 ACKIMKK------DKYCPIKFCHKCLLNRYGEKA-EDA-ALLDGWNCPRCR 48 (502)
Q Consensus 6 sChqcr~------~~~C~~~fC~~CL~nRYge~v-~ev-~~~~~W~CP~CR 48 (502)
.|..|.. +..|+..||..||..-.+... .++ .....|.||.|+
T Consensus 65 ~C~vC~~GG~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~ 115 (142)
T 2lbm_A 65 QCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICH 115 (142)
T ss_dssp SCSSSCCCSSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTC
T ss_pred eecccCCCCcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeeccc
Confidence 5777774 478999999999987665322 334 468899999995
No 36
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.86 E-value=0.27 Score=38.59 Aligned_cols=33 Identities=27% Similarity=0.564 Sum_probs=25.0
Q ss_pred hhcccCccc------cccccc-cchhHHhhhhccCHHHhhcCCCccCCCCCCc
Q 010750 5 AACKIMKKD------KYCPIK-FCHKCLLNRYGEKAEDAALLDGWNCPRCRGI 50 (502)
Q Consensus 5 ~sChqcr~~------~~C~~~-fC~~CL~nRYge~v~ev~~~~~W~CP~CRgi 50 (502)
..|.+|... ..|++. ||..|+.+ ...||.||..
T Consensus 26 ~~C~IC~~~~~~~~~~pCgH~~~C~~C~~~-------------~~~CP~Cr~~ 65 (75)
T 2ecg_A 26 KLCKICMDRNIAIVFVPCGHLVTCKQCAEA-------------VDKCPMCYTV 65 (75)
T ss_dssp HSCSSSCSSCCCBCCSSSCCCCBCHHHHHH-------------CSBCTTTCCB
T ss_pred CCCCcCCCCCCCEEEecCCCHHHHHHHhhC-------------CCCCccCCce
Confidence 468888742 469999 99999952 1689999863
No 37
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=87.83 E-value=0.27 Score=44.04 Aligned_cols=44 Identities=25% Similarity=0.718 Sum_probs=33.6
Q ss_pred hcccCcc------ccccccccchhHHhhhhccC-HHHhh-cCCCccCCCCCC
Q 010750 6 ACKIMKK------DKYCPIKFCHKCLLNRYGEK-AEDAA-LLDGWNCPRCRG 49 (502)
Q Consensus 6 sChqcr~------~~~C~~~fC~~CL~nRYge~-v~ev~-~~~~W~CP~CRg 49 (502)
.|+.|.. +..|+..||..||..-.|.. +.++. ....|.|+.|+-
T Consensus 59 ~C~vC~dGG~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~ 110 (129)
T 3ql9_A 59 QCRWCAEGGNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHP 110 (129)
T ss_dssp SCTTTCCCSEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCC
T ss_pred cCeecCCCCeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCC
Confidence 4777874 47899999999999876644 33443 688999999953
No 38
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.77 E-value=0.28 Score=36.66 Aligned_cols=37 Identities=27% Similarity=0.557 Sum_probs=27.2
Q ss_pred hhcccCccc------cccccccchhHHhhhhccCHHHhhcCCCccCCCC
Q 010750 5 AACKIMKKD------KYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRC 47 (502)
Q Consensus 5 ~sChqcr~~------~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~C 47 (502)
..|.+|... -.|++.||..||...... ......||.|
T Consensus 21 ~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~------~~~~~~CP~C 63 (63)
T 2ysj_A 21 VICPICLDILQKPVTIDCGHNFCLKCITQIGET------SCGFFKCPLC 63 (63)
T ss_dssp CBCTTTCSBCSSCEECTTSSEECHHHHHHHHHH------CSSCCCCSCC
T ss_pred CCCCcCCchhCCeEEeCCCCcchHHHHHHHHHc------CCCCCcCcCC
Confidence 468888742 469999999999977631 2345689988
No 39
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.63 E-value=0.43 Score=34.70 Aligned_cols=37 Identities=27% Similarity=0.766 Sum_probs=27.2
Q ss_pred hhcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCC
Q 010750 5 AACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRC 47 (502)
Q Consensus 5 ~sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~C 47 (502)
..|.+|.. -..|++.||..|+...+.. ......||.|
T Consensus 16 ~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~------~~~~~~CP~C 58 (58)
T 2ecj_A 16 ASCSVCLEYLKEPVIIECGHNFCKACITRWWED------LERDFPCPVC 58 (58)
T ss_dssp CBCSSSCCBCSSCCCCSSCCCCCHHHHHHHTTS------SCCSCCCSCC
T ss_pred CCCccCCcccCccEeCCCCCccCHHHHHHHHHh------cCCCCCCCCC
Confidence 46888874 2459999999999977532 1346789987
No 40
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=87.26 E-value=0.19 Score=38.14 Aligned_cols=29 Identities=31% Similarity=0.764 Sum_probs=22.0
Q ss_pred cccccccchhHHhhhhccCHHHhhcCCCccCCCCCCcc
Q 010750 14 KYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGIC 51 (502)
Q Consensus 14 ~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgiC 51 (502)
..|++.||..|+...... .-.||.||..-
T Consensus 33 ~~CgH~fc~~Ci~~~~~~---------~~~CP~Cr~~~ 61 (71)
T 3ng2_A 33 TECGHVFCSQCLRDSLKN---------ANTCPTCRKKI 61 (71)
T ss_dssp CTTSCEEEHHHHHHHHHH---------CSBCTTTCCBC
T ss_pred CCCCChHhHHHHHHHHHc---------CCCCCCCCCcc
Confidence 369999999999977632 13899998743
No 41
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=87.06 E-value=0.22 Score=35.94 Aligned_cols=36 Identities=31% Similarity=0.717 Sum_probs=26.5
Q ss_pred hhcccCccc----------cccccccchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 5 AACKIMKKD----------KYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 5 ~sChqcr~~----------~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
..|.+|... ..|++.||..|+...... ...||.||.
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~---------~~~CP~Cr~ 51 (55)
T 2ecm_A 6 SGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKE---------GYRCPLCSG 51 (55)
T ss_dssp CSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHH---------TCCCTTSCC
T ss_pred CcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHc---------CCcCCCCCC
Confidence 457777632 359999999999876532 168999985
No 42
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=86.72 E-value=0.32 Score=39.08 Aligned_cols=33 Identities=24% Similarity=0.624 Sum_probs=25.5
Q ss_pred hhcccCccc------cccccc-cchhHHhhhhccCHHHhhcCCCccCCCCCCc
Q 010750 5 AACKIMKKD------KYCPIK-FCHKCLLNRYGEKAEDAALLDGWNCPRCRGI 50 (502)
Q Consensus 5 ~sChqcr~~------~~C~~~-fC~~CL~nRYge~v~ev~~~~~W~CP~CRgi 50 (502)
..|..|... -+|++. ||..|+... |.||.||..
T Consensus 19 ~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~~-------------~~CP~Cr~~ 58 (79)
T 2yho_A 19 MLCMVCCEEEINSTFCPCGHTVCCESCAAQL-------------QSCPVCRSR 58 (79)
T ss_dssp TBCTTTSSSBCCEEEETTCBCCBCHHHHTTC-------------SBCTTTCCB
T ss_pred CEeEEeCcccCcEEEECCCCHHHHHHHHHhc-------------CcCCCCCch
Confidence 468888742 469998 999999742 599999973
No 43
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=86.50 E-value=0.26 Score=36.35 Aligned_cols=28 Identities=32% Similarity=0.805 Sum_probs=21.8
Q ss_pred cccccccchhHHhhhhccCHHHhhcCCCccCCCCCCc
Q 010750 14 KYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGI 50 (502)
Q Consensus 14 ~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgi 50 (502)
..|++.||..|+...... ...||.||..
T Consensus 26 ~~CgH~fc~~Ci~~~~~~---------~~~CP~Cr~~ 53 (64)
T 2xeu_A 26 TECGHVFCSQCLRDSLKN---------ANTCPTCRKK 53 (64)
T ss_dssp ETTSCEEEHHHHHHHHHH---------CSBCTTTCCB
T ss_pred CCCCCchhHHHHHHHHHc---------CCCCCCCCcc
Confidence 369999999999976532 4589998864
No 44
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=86.43 E-value=0.21 Score=42.31 Aligned_cols=38 Identities=26% Similarity=0.682 Sum_probs=27.1
Q ss_pred hhcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCCc
Q 010750 5 AACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGI 50 (502)
Q Consensus 5 ~sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgi 50 (502)
..|.+|.. ...|++.||..|+...... ....||.||..
T Consensus 19 ~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~--------~~~~CP~Cr~~ 62 (118)
T 3hct_A 19 YECPICLMALREAVQTPCGHRFCKACIIKSIRD--------AGHKCPVDNEI 62 (118)
T ss_dssp GBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHH--------HCSBCTTTCCB
T ss_pred CCCCcCChhhcCeEECCcCChhhHHHHHHHHhh--------CCCCCCCCCCC
Confidence 46888874 2469999999999876521 12389988753
No 45
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=85.58 E-value=0.34 Score=40.60 Aligned_cols=39 Identities=33% Similarity=0.812 Sum_probs=28.6
Q ss_pred hhcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCCcc
Q 010750 5 AACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGIC 51 (502)
Q Consensus 5 ~sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgiC 51 (502)
..|.+|.. -..|++.||..|+...... ....||.||...
T Consensus 24 ~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~--------~~~~CP~Cr~~~ 68 (116)
T 1rmd_A 24 ISCQICEHILADPVETSCKHLFCRICILRCLKV--------MGSYCPSCRYPC 68 (116)
T ss_dssp TBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHH--------TCSBCTTTCCBC
T ss_pred CCCCCCCcHhcCcEEcCCCCcccHHHHHHHHhH--------CcCcCCCCCCCC
Confidence 36888874 2569999999999876632 135799998754
No 46
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=85.11 E-value=0.31 Score=45.70 Aligned_cols=38 Identities=18% Similarity=0.051 Sum_probs=27.3
Q ss_pred hcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCCcc
Q 010750 6 ACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGIC 51 (502)
Q Consensus 6 sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgiC 51 (502)
.|.+|.. ...|++.||..|+...... ....||.||...
T Consensus 210 ~c~i~~~~~~dPv~~~~gh~f~~~~i~~~~~~--------~~~~cP~~~~~~ 253 (281)
T 2c2l_A 210 CGKISFELMREPCITPSGITYDRKDIEEHLQR--------VGHFNPVTRSPL 253 (281)
T ss_dssp BCTTTCSBCSSEEECSSCCEEETTHHHHHHHH--------TCSSCTTTCCCC
T ss_pred CCcCcCCHhcCCeECCCCCEECHHHHHHHHHH--------CCCCCcCCCCCC
Confidence 5888874 2559999999999976532 123499998754
No 47
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=83.66 E-value=0.49 Score=38.41 Aligned_cols=36 Identities=25% Similarity=0.516 Sum_probs=26.9
Q ss_pred hhcccCcc---------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 5 AACKIMKK---------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 5 ~sChqcr~---------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
..|.+|.. .-.|++.||..|+..+... ...||.||.
T Consensus 41 ~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~---------~~~CP~Cr~ 85 (91)
T 2l0b_A 41 MCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQK---------SGTCPVCRC 85 (91)
T ss_dssp SEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTT---------TCBCTTTCC
T ss_pred CCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHc---------CCcCcCcCc
Confidence 46888862 1359999999999987632 348999986
No 48
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=83.66 E-value=0.17 Score=44.83 Aligned_cols=37 Identities=22% Similarity=0.562 Sum_probs=27.0
Q ss_pred hhcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 5 AACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 5 ~sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
-.|.+|.. ...|++.||..||..... .....||.||.
T Consensus 32 ~~C~IC~~~~~~pv~~~CgH~FC~~Ci~~~~~--------~~~~~CP~Cr~ 74 (141)
T 3knv_A 32 YLCSACRNVLRRPFQAQCGHRYCSFCLASILS--------SGPQNCAACVH 74 (141)
T ss_dssp GBCTTTCSBCSSEEECTTSCEEEHHHHHHHGG--------GSCEECHHHHH
T ss_pred cCCCCCChhhcCcEECCCCCccCHHHHHHHHh--------cCCCCCCCCCC
Confidence 46888874 257999999999997652 23457887765
No 49
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.45 E-value=0.18 Score=38.37 Aligned_cols=36 Identities=33% Similarity=0.696 Sum_probs=26.7
Q ss_pred hhcccCccc-----cccccccchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 5 AACKIMKKD-----KYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 5 ~sChqcr~~-----~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
..|.+|... ..|++.||..|+..... ....||.||.
T Consensus 16 ~~C~IC~~~~~~~~~~CgH~fc~~Ci~~~~~---------~~~~CP~Cr~ 56 (70)
T 2ecn_A 16 EECCICMDGRADLILPCAHSFCQKCIDKWSD---------RHRNCPICRL 56 (70)
T ss_dssp CCCSSSCCSCCSEEETTTEEECHHHHHHSSC---------CCSSCHHHHH
T ss_pred CCCeeCCcCccCcccCCCCcccHHHHHHHHH---------CcCcCCCcCC
Confidence 467777742 46999999999987553 3567888874
No 50
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.44 E-value=0.79 Score=35.80 Aligned_cols=33 Identities=24% Similarity=0.647 Sum_probs=26.1
Q ss_pred hhhcccCccc------cccccc-cchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 4 VAACKIMKKD------KYCPIK-FCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 4 ~~sChqcr~~------~~C~~~-fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
...|.+|... -+|++. ||..|+.. .+.||.||.
T Consensus 15 ~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~-------------~~~CP~CR~ 54 (68)
T 2ea5_A 15 SKDCVVCQNGTVNWVLLPCRHTCLCDGCVKY-------------FQQCPMCRQ 54 (68)
T ss_dssp SSCCSSSSSSCCCCEETTTTBCCSCTTHHHH-------------CSSCTTTCC
T ss_pred CCCCCCcCcCCCCEEEECCCChhhhHHHHhc-------------CCCCCCCCc
Confidence 4568888743 469998 99999983 279999997
No 51
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=80.22 E-value=0.61 Score=46.45 Aligned_cols=55 Identities=18% Similarity=0.300 Sum_probs=38.1
Q ss_pred hhcccCcc------c-cccccccchhHHhhhhccCHHHhhcCCCccCCC--CCCcccCccccccCCCCCchHHHHHH
Q 010750 5 AACKIMKK------D-KYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPR--CRGICNCSLCMKKRGHQPTGQLVQAA 72 (502)
Q Consensus 5 ~sChqcr~------~-~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~--CRgiCNCS~Crrk~G~~PTG~l~~~a 72 (502)
..|.+|.. . ..|++.||..|+..... ....|.||. |+..+. ...+.|--.|-+.+
T Consensus 182 l~CPIcl~~f~DPVts~~CGHsFcR~cI~~~~~-------~~~~~~CPvtGCr~~l~------~~dL~pN~~L~~lv 245 (267)
T 3htk_C 182 LTCPITCKPYEAPLISRKCNHVFDRDGIQNYLQ-------GYTTRDCPQAACSQVVS------MRDFVRDPIMELRC 245 (267)
T ss_dssp SBCTTTSSBCSSEEEESSSCCEEEHHHHHHHST-------TCSCEECSGGGCSCEEC------GGGEEECHHHHHHH
T ss_pred eECcCccCcccCCeeeCCCCCcccHHHHHHHHH-------hCCCCCCCcccccCcCc------hhhCCcCHHHHHHH
Confidence 46888884 2 47999999999986543 235699999 998442 33466665655554
No 52
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.61 E-value=0.86 Score=36.31 Aligned_cols=26 Identities=23% Similarity=0.552 Sum_probs=20.6
Q ss_pred ccccccchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 15 YCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 15 ~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
.|++.||..||...... .-.||.||.
T Consensus 47 ~C~H~FH~~Ci~~Wl~~---------~~~CP~CR~ 72 (81)
T 2ecl_A 47 ECNHSFHNCCMSLWVKQ---------NNRCPLCQQ 72 (81)
T ss_dssp TTSCEEEHHHHHHHTTT---------CCBCTTTCC
T ss_pred CCCCccChHHHHHHHHh---------CCCCCCcCC
Confidence 49999999999987632 238999985
No 53
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=78.57 E-value=1.1 Score=34.19 Aligned_cols=37 Identities=22% Similarity=0.489 Sum_probs=27.2
Q ss_pred hhhcccCccc------c--ccccc-cchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 4 VAACKIMKKD------K--YCPIK-FCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 4 ~~sChqcr~~------~--~C~~~-fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
...|..|... - +|++. ||..|+..-. ...+.||.||.
T Consensus 7 ~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~---------~~~~~CPiCR~ 52 (63)
T 2vje_B 7 LKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLK---------KAGASCPICKK 52 (63)
T ss_dssp GSBCTTTSSSBSCEEEEETTEEEEEECHHHHHHHH---------HTTCBCTTTCC
T ss_pred CCCCcccCCcCCCeEEEecCCCCHhHHHHHHHHHH---------HhCCcCCCcCc
Confidence 4568888742 1 79998 9999997532 12489999996
No 54
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=78.39 E-value=1.3 Score=41.16 Aligned_cols=45 Identities=31% Similarity=0.535 Sum_probs=36.2
Q ss_pred hhcccCcc------c--cccccccchhHHhhhhccCH-HHhhcCCCccCCCCCC
Q 010750 5 AACKIMKK------D--KYCPIKFCHKCLLNRYGEKA-EDAALLDGWNCPRCRG 49 (502)
Q Consensus 5 ~sChqcr~------~--~~C~~~fC~~CL~nRYge~v-~ev~~~~~W~CP~CRg 49 (502)
..|+.|.. | ..|...||..||..-.|.-. .++.....|.|=.|.-
T Consensus 80 ~yC~wC~~Gg~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P 133 (159)
T 3a1b_A 80 SYCTICCGGREVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGH 133 (159)
T ss_dssp SSCTTTSCCSEEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCS
T ss_pred ceeeEecCCCeEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCC
Confidence 35777774 2 37999999999999999854 5678999999998874
No 55
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=78.37 E-value=0.99 Score=37.86 Aligned_cols=36 Identities=11% Similarity=-0.051 Sum_probs=27.1
Q ss_pred hcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCCc
Q 010750 6 ACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGI 50 (502)
Q Consensus 6 sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgi 50 (502)
.|.+|.. ...|++.||..|+...... ...||.|+..
T Consensus 31 ~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~---------~~~cP~~~~~ 72 (100)
T 2kre_A 31 RDPLMDTLMTDPVRLPSGTIMDRSIILRHLLN---------SPTDPFNRQT 72 (100)
T ss_dssp BCTTTCSBCSSEEEETTTEEEEHHHHHHHTTS---------CSBCSSSCCB
T ss_pred CCcCccCcccCCeECCCCCEEchHHHHHHHHc---------CCCCCCCCCC
Confidence 5777773 2459999999999976632 3689999864
No 56
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=78.07 E-value=0.95 Score=36.60 Aligned_cols=36 Identities=11% Similarity=-0.019 Sum_probs=27.0
Q ss_pred hcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCCc
Q 010750 6 ACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGI 50 (502)
Q Consensus 6 sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgi 50 (502)
.|.+|.. ...|++.||..|+...... ...||.|+..
T Consensus 16 ~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~---------~~~cP~~~~~ 57 (85)
T 2kr4_A 16 RDPLMDTLMTDPVRLPSGTVMDRSIILRHLLN---------SPTDPFNRQM 57 (85)
T ss_dssp BCTTTCSBCSSEEECTTSCEEEHHHHHHHHHH---------CSBCTTTCCB
T ss_pred ECcccCchhcCCeECCCCCEECHHHHHHHHhc---------CCCCCCCcCC
Confidence 5777773 2459999999999976632 3689999864
No 57
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=77.67 E-value=0.62 Score=39.73 Aligned_cols=27 Identities=19% Similarity=0.357 Sum_probs=21.4
Q ss_pred cccccccchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 14 KYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 14 ~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
..|++.|+..||...... .-.||.||.
T Consensus 71 ~~C~H~FH~~Ci~~Wl~~---------~~~CP~Cr~ 97 (106)
T 3dpl_R 71 GVCNHAFHFHCISRWLKT---------RQVCPLDNR 97 (106)
T ss_dssp ETTSCEEEHHHHHHHHTT---------CSBCSSSCS
T ss_pred cccCcEECHHHHHHHHHc---------CCcCcCCCC
Confidence 469999999999876532 458999986
No 58
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=77.61 E-value=0.85 Score=38.01 Aligned_cols=27 Identities=33% Similarity=0.833 Sum_probs=21.2
Q ss_pred ccccccchhHHhhhhccCHHHhhcCCCccCCCCCCc
Q 010750 15 YCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGI 50 (502)
Q Consensus 15 ~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgi 50 (502)
.|++.||..|+...... ...||.||..
T Consensus 31 ~CgH~fc~~Ci~~~~~~---------~~~CP~Cr~~ 57 (133)
T 4ap4_A 31 ECGHVFCSQCLRDSLKN---------ANTCPTCRKK 57 (133)
T ss_dssp TTCCEEEHHHHHHHHTT---------CSBCTTTCCB
T ss_pred CCCChhhHHHHHHHHHh---------CCCCCCCCCc
Confidence 59999999999977632 2389999863
No 59
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=76.28 E-value=0.78 Score=42.90 Aligned_cols=41 Identities=24% Similarity=0.541 Sum_probs=29.5
Q ss_pred hhcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCCc
Q 010750 5 AACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGI 50 (502)
Q Consensus 5 ~sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgi 50 (502)
..|..|+. |..|...|-..||.-.... .....|.||.|+..
T Consensus 8 ~~C~~C~~~g~ll~Cd~C~~~~H~~Cl~p~l~~-----~p~~~W~C~~C~~~ 54 (207)
T 3u5n_A 8 DWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLS-----FPSGDWICTFCRDI 54 (207)
T ss_dssp SSBTTTCCCEEEEECSSSSCEECTTTSSSCCSS-----CCSSCCCCTTTSCS
T ss_pred CCCCCCCCCCceEEcCCCCCccCCccCCCCCCC-----CCCCCEEeCceeCc
Confidence 35788874 5779999999998643322 24568999999863
No 60
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=75.99 E-value=0.78 Score=41.99 Aligned_cols=40 Identities=23% Similarity=0.573 Sum_probs=28.4
Q ss_pred hcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCCc
Q 010750 6 ACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGI 50 (502)
Q Consensus 6 sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgi 50 (502)
.|..|+. |..|...|-..||.--... .....|.||.|+..
T Consensus 6 ~C~~C~~~g~ll~Cd~C~~~~H~~C~~p~l~~-----~p~~~W~C~~C~~~ 51 (184)
T 3o36_A 6 WCAVCQNGGELLCCEKCPKVFHLSCHVPTLTN-----FPSGEWICTFCRDL 51 (184)
T ss_dssp SCTTTCCCSSCEECSSSSCEECTTTSSSCCSS-----CCSSCCCCTTTSCS
T ss_pred ccccCCCCCeeeecCCCCcccCccccCCCCCC-----CCCCCEECccccCc
Confidence 4777774 5778888888888643322 23568999999963
No 61
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=74.38 E-value=1 Score=36.58 Aligned_cols=44 Identities=25% Similarity=0.569 Sum_probs=27.5
Q ss_pred hcccCccc---------cccccccchhHHhhhhccCHHHhhcCCCccCCC--CCCc
Q 010750 6 ACKIMKKD---------KYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPR--CRGI 50 (502)
Q Consensus 6 sChqcr~~---------~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~--CRgi 50 (502)
.|-+|-.. ..|++.||..||.......+.+ -......||. |+..
T Consensus 7 ~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~-g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 7 GCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKE-GLETAISCPDAACPKQ 61 (94)
T ss_dssp CCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHH-CSCCCEECSCTTCSSC
T ss_pred CCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhc-CCcccccCccccCCCC
Confidence 57777631 2599999999998655333321 0113568998 7653
No 62
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=73.91 E-value=1.7 Score=34.41 Aligned_cols=40 Identities=23% Similarity=0.493 Sum_probs=29.0
Q ss_pred hhcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 5 AACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 5 ~sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
..|..|+. +..|...|=..||.-.-.. .....|.||.|..
T Consensus 13 ~~C~vC~~~~~ll~Cd~C~~~~H~~Cl~P~l~~-----~P~g~W~C~~C~~ 58 (66)
T 2lri_C 13 ARCGVCGDGTDVLRCTHCAAAFHWRCHFPAGTS-----RPGTGLRCRSCSG 58 (66)
T ss_dssp CCCTTTSCCTTCEECSSSCCEECHHHHCTTTCC-----CCSSSCCCTTTTT
T ss_pred CCcCCCCCCCeEEECCCCCCceecccCCCccCc-----CCCCCEECccccC
Confidence 46888885 4678888999998543322 2456899999975
No 63
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=73.41 E-value=0.69 Score=40.43 Aligned_cols=26 Identities=19% Similarity=0.385 Sum_probs=0.0
Q ss_pred ccccccchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 15 YCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 15 ~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
.|++.|+..|+...... .-.||.||.
T Consensus 83 ~C~H~FH~~CI~~Wl~~---------~~~CP~Cr~ 108 (117)
T 4a0k_B 83 VCNHAFHFHCISRWLKT---------RQVCPLDNR 108 (117)
T ss_dssp -----------------------------------
T ss_pred CcCceEcHHHHHHHHHc---------CCcCCCCCC
Confidence 79999999999876532 347998875
No 64
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=73.23 E-value=1.7 Score=36.19 Aligned_cols=36 Identities=11% Similarity=-0.050 Sum_probs=27.0
Q ss_pred hcccCcc------ccccc-cccchhHHhhhhccCHHHhhcCCCccCCCCCCc
Q 010750 6 ACKIMKK------DKYCP-IKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGI 50 (502)
Q Consensus 6 sChqcr~------~~~C~-~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgi 50 (502)
.|.+|.. ...|+ +.||..|+...... ...||.||..
T Consensus 24 ~CpI~~~~m~dPV~~~cG~htf~r~cI~~~l~~---------~~~cP~~~~~ 66 (98)
T 1wgm_A 24 LDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLS---------DQTDPFNRSP 66 (98)
T ss_dssp BCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTT---------SCBCTTTCSB
T ss_pred CCcCccccccCCeECCCCCeEECHHHHHHHHHh---------CCCCCCCCCC
Confidence 5777773 35699 99999999976632 3589999864
No 65
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=72.10 E-value=1.2 Score=39.73 Aligned_cols=38 Identities=26% Similarity=0.682 Sum_probs=27.0
Q ss_pred hhcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCCc
Q 010750 5 AACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGI 50 (502)
Q Consensus 5 ~sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgi 50 (502)
-.|.+|.. ...|++.||..|+...... ....||.||..
T Consensus 19 ~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~~--------~~~~CP~Cr~~ 62 (170)
T 3hcs_A 19 YECPICLMALREAVQTPCGHRFCKACIIKSIRD--------AGHKCPVDNEI 62 (170)
T ss_dssp GBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHH--------HCSBCTTTCCB
T ss_pred CCCCCCChhhcCcEECCCCCHHHHHHHHHHHHh--------CCCCCCCCccC
Confidence 46888874 2469999999999976521 12389988753
No 66
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=71.26 E-value=2.4 Score=44.13 Aligned_cols=45 Identities=20% Similarity=0.510 Sum_probs=35.6
Q ss_pred hhcccCcc------cc--ccccccchhHHhhhhccCHH-HhhcCCCccCCCCCC
Q 010750 5 AACKIMKK------DK--YCPIKFCHKCLLNRYGEKAE-DAALLDGWNCPRCRG 49 (502)
Q Consensus 5 ~sChqcr~------~~--~C~~~fC~~CL~nRYge~v~-ev~~~~~W~CP~CRg 49 (502)
..|+.|.. |. .|...||..||.+-.|.-.. ++.....|.|=.|.-
T Consensus 94 ~yCr~C~~Gg~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p 147 (386)
T 2pv0_B 94 SYCSICCSGETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLP 147 (386)
T ss_dssp CSCTTTCCCSSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSS
T ss_pred ccceEcCCCCeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCC
Confidence 35666664 33 89999999999999887664 467889999998875
No 67
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=70.26 E-value=1.7 Score=36.15 Aligned_cols=26 Identities=35% Similarity=0.908 Sum_probs=20.8
Q ss_pred ccccccchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 15 YCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 15 ~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
.|++.||..|+..... ....||.||.
T Consensus 96 ~CgH~fc~~Ci~~~~~---------~~~~CP~Cr~ 121 (133)
T 4ap4_A 96 ECGHVFCSQCLRDSLK---------NANTCPTCRK 121 (133)
T ss_dssp TTSBEEEHHHHHHHHH---------HCSBCTTTCC
T ss_pred CCCChhhHHHHHHHHH---------cCCCCCCCCC
Confidence 6999999999987652 2358999996
No 68
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=67.69 E-value=2.3 Score=32.49 Aligned_cols=37 Identities=22% Similarity=0.416 Sum_probs=27.0
Q ss_pred hhhcccCccc------c--ccccc-cchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 4 VAACKIMKKD------K--YCPIK-FCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 4 ~~sChqcr~~------~--~C~~~-fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
...|.+|... - .|++. ||..|+.... ...+.||.||.
T Consensus 8 ~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~---------~~~~~CPiCR~ 53 (64)
T 2vje_A 8 IEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLK---------KRNKPCPVCRQ 53 (64)
T ss_dssp GSCCTTTSSSCSCEEEEETTEEEEEECHHHHHHHH---------HTTCCCTTTCC
T ss_pred cCCCCcCCCCCCCEEEECCCCCChhhHHHHHHHHH---------HcCCcCCCcCc
Confidence 3468888732 2 79998 8999998543 23578999996
No 69
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=65.39 E-value=2.1 Score=39.86 Aligned_cols=41 Identities=22% Similarity=0.617 Sum_probs=28.8
Q ss_pred hhcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCCc
Q 010750 5 AACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGI 50 (502)
Q Consensus 5 ~sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgi 50 (502)
..|..|+. |..|...|-..||.--... .....|.||.|+..
T Consensus 3 ~~C~~C~~~g~ll~Cd~C~~~~H~~Cl~p~l~~-----~p~g~W~C~~C~~~ 49 (189)
T 2ro1_A 3 TICRVCQKPGDLVMCNQCEFCFHLDCHLPALQD-----VPGEEWSCSLCHVL 49 (189)
T ss_dssp CCBTTTCCCSSCCCCTTTCCBCCSTTSTTCCSS-----CCCTTCCTTTTSCS
T ss_pred CcCccCCCCCceeECCCCCchhccccCCCCccc-----CCCCCCCCcCccCC
Confidence 35777774 5678888888888543322 24578999999864
No 70
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.43 E-value=2.8 Score=34.26 Aligned_cols=41 Identities=17% Similarity=0.451 Sum_probs=27.7
Q ss_pred hcccCcc------cc-ccccccchhHHhhhhccCHHHhhcCCCccCCC--CCC
Q 010750 6 ACKIMKK------DK-YCPIKFCHKCLLNRYGEKAEDAALLDGWNCPR--CRG 49 (502)
Q Consensus 6 sChqcr~------~~-~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~--CRg 49 (502)
.|.+|.. .. .|++.||..||...+...- -......||. |+.
T Consensus 9 ~CPI~~~~~~dPV~~~~cGh~f~r~cI~~~l~~~~---~~~~~~~CP~tgc~~ 58 (94)
T 2yu4_A 9 TCPITKEEMKKPVKNKVCGHTYEEDAIVRMIESRQ---KRKKKAYCPQIGCSH 58 (94)
T ss_dssp BCTTTCSBCSSEEEESSSCCEEEHHHHHHHHHHHH---TTTCCBCCCSTTCCC
T ss_pred ECcCcCchhcCCEEcCCCCCeecHHHHHHHHHHcc---CcCCCCCCCcCcCcc
Confidence 5777774 24 5999999999997764221 1134678998 664
No 71
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=62.14 E-value=4.1 Score=34.68 Aligned_cols=42 Identities=21% Similarity=0.404 Sum_probs=28.6
Q ss_pred ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCCcccCcccccc
Q 010750 13 DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGICNCSLCMKK 59 (502)
Q Consensus 13 ~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgiCNCS~Crrk 59 (502)
+..|+..|=..||.... .+........|.||.|+ .|.+|++.
T Consensus 29 C~~C~~~~H~~Cl~~~~--~~~~~~~~~~W~C~~C~---~C~vC~~~ 70 (112)
T 3v43_A 29 CADCGNSGHPSCLKFSP--ELTVRVKALRWQCIECK---TCSSCRDQ 70 (112)
T ss_dssp CTTTCCEECHHHHTCCH--HHHHHHHTSCCCCTTTC---CBTTTCCC
T ss_pred hhhcCCCCCCchhcCCH--HHHHHhhccccccccCC---ccccccCc
Confidence 35677788888885321 12233467899999998 58888754
No 72
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=59.42 E-value=4.3 Score=37.90 Aligned_cols=38 Identities=16% Similarity=0.017 Sum_probs=27.2
Q ss_pred hcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCCcc
Q 010750 6 ACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGIC 51 (502)
Q Consensus 6 sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgiC 51 (502)
.|.+|.. ...|++.||..|+...... ... .||.|+...
T Consensus 108 ~CPI~~elm~DPV~~~~Ghtfer~~I~~~l~~-------~~~-tcP~t~~~l 151 (179)
T 2f42_A 108 CGKISFELMREPCITPSGITYDRKDIEEHLQR-------VGH-FDPVTRSPL 151 (179)
T ss_dssp BCTTTCSBCSSEEECTTSCEEEHHHHHHHHHH-------TCS-BCTTTCCBC
T ss_pred cccCccccCCCCeECCCCCEECHHHHHHHHHh-------CCC-CCCCCcCCC
Confidence 5777774 2569999999999976632 122 699999643
No 73
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=58.89 E-value=3.6 Score=31.70 Aligned_cols=40 Identities=25% Similarity=0.669 Sum_probs=28.4
Q ss_pred hhcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 5 AACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 5 ~sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
..|..|+. +..|...|=..||.-.... .....|.||.|+.
T Consensus 12 ~~C~vC~~~g~ll~CD~C~~~fH~~Cl~p~l~~-----~p~g~W~C~~C~~ 57 (61)
T 2l5u_A 12 DYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEK-----APEGKWSCPHCEK 57 (61)
T ss_dssp SSCTTTSCCSSEEECSSSSCEEEHHHHCTTCCS-----CCCSSCCCTTGGG
T ss_pred CCCccCCCCCcEEECCCCChhhhhhccCCCCCC-----CCCCceECccccc
Confidence 56888874 4668888888888754322 2457999999963
No 74
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=57.93 E-value=4.7 Score=34.18 Aligned_cols=44 Identities=25% Similarity=0.623 Sum_probs=31.9
Q ss_pred hcccCcc--------ccccccccchhHHhh-hhccCH--HH----hhcCCCccCCCCCC
Q 010750 6 ACKIMKK--------DKYCPIKFCHKCLLN-RYGEKA--ED----AALLDGWNCPRCRG 49 (502)
Q Consensus 6 sChqcr~--------~~~C~~~fC~~CL~n-RYge~v--~e----v~~~~~W~CP~CRg 49 (502)
.|..|.. |..|++.|=..||.+ .|.... .+ +.-...|.||.|-+
T Consensus 17 ~C~VC~~~t~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~Cen 75 (89)
T 1wil_A 17 MCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDN 75 (89)
T ss_dssp CCTTTCCCCSSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCC
T ss_pred ccCccccccccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccch
Confidence 4666662 678999999999998 576554 22 22457999999964
No 75
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=56.92 E-value=7.5 Score=33.69 Aligned_cols=29 Identities=24% Similarity=0.500 Sum_probs=22.4
Q ss_pred ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 13 DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 13 ~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
.-+|.+.||+.|..... ...+-.||.|+.
T Consensus 17 mIPCkHvFCydCa~~~~--------~~~~k~Cp~C~~ 45 (101)
T 3vk6_A 17 MIPCKHVFCYDCAILHE--------KKGDKMCPGCSD 45 (101)
T ss_dssp EETTCCEEEHHHHHHHH--------HTTCCBCTTTCC
T ss_pred eccccccHHHHHHHHHH--------hccCCCCcCcCC
Confidence 36699999999987432 355668999997
No 76
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=56.72 E-value=5.5 Score=29.12 Aligned_cols=40 Identities=33% Similarity=0.643 Sum_probs=24.2
Q ss_pred hhcccCcc---------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 5 AACKIMKK---------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 5 ~sChqcr~---------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
+.|..|+. +..|...|=..||.-...+ .....|.||.|+.
T Consensus 1 a~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~-----~P~g~W~C~~C~~ 49 (51)
T 1f62_A 1 ARCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYE-----VPDGEWQCPACQP 49 (51)
T ss_dssp CCCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCS-----CCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCC-----CCCCcEECcCccc
Confidence 45777774 3446666656666432221 2356899999974
No 77
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=55.49 E-value=3.5 Score=31.76 Aligned_cols=40 Identities=30% Similarity=0.692 Sum_probs=26.6
Q ss_pred hhcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 5 AACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 5 ~sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
..|..|+. +..|...|=..||.-...+ .....|.||.|+.
T Consensus 10 ~~C~vC~~~g~ll~Cd~C~~~fH~~Cl~ppl~~-----~p~g~W~C~~C~~ 55 (61)
T 1mm2_A 10 EFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPE-----IPNGEWLCPRCTC 55 (61)
T ss_dssp SSCTTTCCCSSCBCCSSSCCCBCSSSSSSCCSS-----CCSSCCCCTTTTT
T ss_pred CcCCCCCCCCCEEEcCCCCHHHcccccCCCcCc-----CCCCccCChhhcC
Confidence 45777774 4557777777777643322 2357899999974
No 78
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=53.32 E-value=4.5 Score=34.00 Aligned_cols=41 Identities=22% Similarity=0.580 Sum_probs=28.9
Q ss_pred hhhcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 4 VAACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 4 ~~sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
...|..|+. |..|...|=-.||.-...+. ....|.||.|+.
T Consensus 25 ~~~C~vC~~~g~LL~CD~C~~~fH~~Cl~PpL~~~-----P~g~W~C~~C~~ 71 (88)
T 1fp0_A 25 ATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDV-----PGEEWSCSLCHV 71 (88)
T ss_dssp SSCCSSSCSSSCCEECTTSSCEECTTSSSTTCCCC-----CSSSCCCCSCCC
T ss_pred CCcCcCcCCCCCEEECCCCCCceecccCCCCCCCC-----cCCCcCCccccC
Confidence 356888884 46688888888886544332 457999999985
No 79
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=49.65 E-value=3.7 Score=36.96 Aligned_cols=34 Identities=24% Similarity=0.597 Sum_probs=23.8
Q ss_pred ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCCc
Q 010750 13 DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGI 50 (502)
Q Consensus 13 ~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgi 50 (502)
|..|..-|-..|+. ....+......|.||.|+..
T Consensus 26 Cd~C~~WfH~~Cv~----~~~~~~~~~~~~~C~~C~~~ 59 (174)
T 2ri7_A 26 CDRCQNWYHGRCVG----ILQSEAELIDEYVCPQCQST 59 (174)
T ss_dssp CTTTCCEEEHHHHT----CCHHHHTTCSSCCCHHHHHH
T ss_pred CCCCCchhChhhcC----CchhhccCccCeecCCCcch
Confidence 45688888888883 33333345679999999763
No 80
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=46.04 E-value=8.6 Score=32.34 Aligned_cols=46 Identities=24% Similarity=0.667 Sum_probs=31.7
Q ss_pred hcccCcc---------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCCcccCcccccc
Q 010750 6 ACKIMKK---------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGICNCSLCMKK 59 (502)
Q Consensus 6 sChqcr~---------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgiCNCS~Crrk 59 (502)
.|..|.. +..|+..|=..||..... .+....|.||.|+ .|.+|.+.
T Consensus 9 ~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~-----~~~~~~W~C~~C~---~C~~C~~~ 63 (111)
T 2ysm_A 9 NCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVT-----PLKRAGWQCPECK---VCQNCKQS 63 (111)
T ss_dssp CBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCC-----TTTSTTCCCTTTC---CCTTTCCC
T ss_pred CCcCCCCCCCCcCCeECCCCCCCcChHHhCCccc-----cccccCccCCcCC---cccccCcc
Confidence 4666653 356778888888876542 1246799999997 57777654
No 81
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=42.53 E-value=8.5 Score=32.73 Aligned_cols=31 Identities=23% Similarity=0.439 Sum_probs=20.0
Q ss_pred cccccccchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 14 KYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 14 ~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
..|...|=..||.-...+. ....|.||.|+-
T Consensus 81 d~C~~~yH~~Cl~p~l~~~-----P~~~W~C~~C~~ 111 (112)
T 3v43_A 81 DSCDRGFHMECCDPPLTRM-----PKGMWICQICRP 111 (112)
T ss_dssp TTTCCEECGGGCSSCCSSC-----CSSCCCCTTTSC
T ss_pred CCCCCeeecccCCCCCCCC-----CCCCeECCCCCC
Confidence 3366667777775444332 356899999974
No 82
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=41.21 E-value=7.4 Score=32.41 Aligned_cols=38 Identities=16% Similarity=0.180 Sum_probs=24.8
Q ss_pred cccccccccchhHHhh--hhccCHHHhhcCCCccCCCCCC
Q 010750 12 KDKYCPIKFCHKCLLN--RYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 12 ~~~~C~~~fC~~CL~n--RYge~v~ev~~~~~W~CP~CRg 49 (502)
.|..|..-|++.|+.. .|...+........|.||.|..
T Consensus 4 ~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~ 43 (140)
T 2ku7_A 4 QCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTE 43 (140)
T ss_dssp CCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTT
T ss_pred ccccCCCccCCcccccCHHHHHHHhhccccceeeCccccc
Confidence 5677888899999642 3433343323355799999954
No 83
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=40.81 E-value=8.5 Score=31.29 Aligned_cols=10 Identities=50% Similarity=1.720 Sum_probs=7.6
Q ss_pred CC-ccCCCCCC
Q 010750 40 DG-WNCPRCRG 49 (502)
Q Consensus 40 ~~-W~CP~CRg 49 (502)
.. |.||.|++
T Consensus 66 g~~W~C~~C~~ 76 (77)
T 3shb_A 66 EDEWYCPECRN 76 (77)
T ss_dssp SSCCCCTTTC-
T ss_pred CCceECcCccc
Confidence 35 99999985
No 84
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.77 E-value=3 Score=31.43 Aligned_cols=40 Identities=25% Similarity=0.591 Sum_probs=25.9
Q ss_pred hhcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 5 AACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 5 ~sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
..|..|+. +..|...|=..||.--... .....|.||.|+.
T Consensus 10 ~~C~vC~~~g~ll~Cd~C~~~~H~~Cl~ppl~~-----~p~g~W~C~~C~~ 55 (56)
T 2yql_A 10 DFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKT-----IPKGMWICPRCQD 55 (56)
T ss_dssp CSCSSSCCSSCCEECSSSSCEECSSSSSSCCCS-----CCCSSCCCHHHHC
T ss_pred CCCccCCCCCeEEEcCCCCcceECccCCCCcCC-----CCCCceEChhhhC
Confidence 45777874 4557777777777643322 2356899999864
No 85
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=34.86 E-value=12 Score=31.34 Aligned_cols=30 Identities=20% Similarity=0.399 Sum_probs=18.1
Q ss_pred ccccccccchhHHhhhhccCHHHhhcCCCccCCCCC
Q 010750 13 DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCR 48 (502)
Q Consensus 13 ~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CR 48 (502)
|..|..-|=..|+.-... .+ ...|.||.|+
T Consensus 45 Cd~C~~w~H~~C~~~~~~----~~--p~~w~C~~C~ 74 (98)
T 2lv9_A 45 CDKCSVWQHIDCMGIDRQ----HI--PDTYLCERCQ 74 (98)
T ss_dssp BTTTCBEEETTTTTCCTT----SC--CSSBCCTTTS
T ss_pred cCCCCCcCcCcCCCCCcc----CC--CCCEECCCCc
Confidence 455766666667643221 11 2379999996
No 86
>2o35_A Hypothetical protein DUF1244; helix bundle, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.12A {Sinorhizobium meliloti} SCOP: a.293.1.1
Probab=33.52 E-value=12 Score=32.55 Aligned_cols=18 Identities=50% Similarity=0.912 Sum_probs=14.5
Q ss_pred cccchhHHhhhhccCHHH
Q 010750 18 IKFCHKCLLNRYGEKAED 35 (502)
Q Consensus 18 ~~fC~~CL~nRYge~v~e 35 (502)
..||+.||.++|-+-..+
T Consensus 41 AGFCRNCLskWy~~aA~e 58 (105)
T 2o35_A 41 AGFCRNCLSNWYREAAEA 58 (105)
T ss_dssp HSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 479999999999765543
No 87
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=32.77 E-value=10 Score=33.44 Aligned_cols=25 Identities=24% Similarity=0.437 Sum_probs=19.1
Q ss_pred hhcccCcc----------ccccccccchhHHhhhh
Q 010750 5 AACKIMKK----------DKYCPIKFCHKCLLNRY 29 (502)
Q Consensus 5 ~sChqcr~----------~~~C~~~fC~~CL~nRY 29 (502)
..|..|.. |..|+..||+.|..++.
T Consensus 20 ~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~ 54 (120)
T 1y02_A 20 PSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVG 54 (120)
T ss_dssp CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC--
T ss_pred CcccCcCCccccccccccCCCCCCeeCHHHhCCCC
Confidence 36888874 57799999999999876
No 88
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=32.64 E-value=6.7 Score=29.80 Aligned_cols=39 Identities=26% Similarity=0.606 Sum_probs=25.8
Q ss_pred hhcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCC
Q 010750 5 AACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCR 48 (502)
Q Consensus 5 ~sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CR 48 (502)
..|..|+. +..|...|=..||.-.... .....|.||.|+
T Consensus 6 ~~C~vC~~~g~ll~Cd~C~~~fH~~Cl~ppl~~-----~p~g~W~C~~C~ 50 (60)
T 2puy_A 6 DFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKT-----IPKGMWICPRCQ 50 (60)
T ss_dssp SSCTTTCCCSSCEECSSSSCEECGGGSSSCCSS-----CCCSCCCCHHHH
T ss_pred CCCcCCCCCCcEEEcCCCCcCEECCcCCCCcCC-----CCCCceEChhcc
Confidence 46777874 4567777777777643322 235689999885
No 89
>3fyb_A Protein of unknown function (DUF1244); hydrocar degrading, structural genomics, PSI-2; HET: PEG; 1.80A {Alcanivorax borkumensis SK2}
Probab=31.76 E-value=13 Score=32.21 Aligned_cols=17 Identities=35% Similarity=0.688 Sum_probs=14.0
Q ss_pred cccchhHHhhhhccCHH
Q 010750 18 IKFCHKCLLNRYGEKAE 34 (502)
Q Consensus 18 ~~fC~~CL~nRYge~v~ 34 (502)
..||+.||.++|-+-..
T Consensus 40 AGFCRNCLskWy~~aA~ 56 (104)
T 3fyb_A 40 ADFCRNCLAKWLMEAAT 56 (104)
T ss_dssp HSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 47999999999976554
No 90
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=30.95 E-value=12 Score=32.78 Aligned_cols=26 Identities=27% Similarity=0.542 Sum_probs=20.5
Q ss_pred hhhcccCcc----------ccccccccchhHHhhhh
Q 010750 4 VAACKIMKK----------DKYCPIKFCHKCLLNRY 29 (502)
Q Consensus 4 ~~sChqcr~----------~~~C~~~fC~~CL~nRY 29 (502)
...|..|.. |..|+..||+.|...+.
T Consensus 69 ~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~~~~ 104 (125)
T 1joc_A 69 VQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKNA 104 (125)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEE
T ss_pred CCCCcCcCCccccccccccCCCCCeEEChHHhCCcc
Confidence 456888874 57799999999998774
No 91
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=30.78 E-value=12 Score=31.87 Aligned_cols=41 Identities=24% Similarity=0.543 Sum_probs=26.5
Q ss_pred cccccccchhHHhhhhccCHHHhhcCCCccCCCCCCcccCcccccc
Q 010750 14 KYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGICNCSLCMKK 59 (502)
Q Consensus 14 ~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgiCNCS~Crrk 59 (502)
..|+..|=..||.... + +........|.||.|+ .|.+|.+.
T Consensus 27 ~~C~~~~H~~Cl~~~~-~-~~~~~~~~~W~C~~C~---~C~~C~~~ 67 (114)
T 2kwj_A 27 ADCGRSGHPTCLQFTL-N-MTEAVKTYKWQCIECK---SCILCGTS 67 (114)
T ss_dssp SSSCCEECTTTTTCCH-H-HHHHHHHTTCCCGGGC---CCTTTTCC
T ss_pred CCCCCccchhhCCChh-h-hhhccCCCccCccccC---ccCccccc
Confidence 4577777677775433 1 1223457799999997 57888654
No 92
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=30.03 E-value=19 Score=28.41 Aligned_cols=9 Identities=56% Similarity=1.778 Sum_probs=8.0
Q ss_pred CccCCCCCC
Q 010750 41 GWNCPRCRG 49 (502)
Q Consensus 41 ~W~CP~CRg 49 (502)
.|.||.|+.
T Consensus 60 ~W~C~~C~~ 68 (70)
T 3asl_A 60 EWYCPECRN 68 (70)
T ss_dssp CCCCTTTSC
T ss_pred CcCCcCccC
Confidence 999999974
No 93
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=29.69 E-value=2.3e+02 Score=26.21 Aligned_cols=34 Identities=6% Similarity=0.020 Sum_probs=16.7
Q ss_pred HHHhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHH
Q 010750 410 DDQNSEFVEKVKESREKFVAAKEKEKKLKQKLQD 443 (502)
Q Consensus 410 de~~ee~~e~~~~aReka~aAk~Keke~keklk~ 443 (502)
+||..++++...+.|.+..+-.++-+..++.|++
T Consensus 70 ~EQq~ql~~I~~e~r~~~~~Lr~ql~akr~EL~a 103 (175)
T 3lay_A 70 TEQQATAQKIYDDYYTQTSALRQQLISKRYEYNA 103 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555555555555555443333333333433
No 94
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=29.40 E-value=12 Score=31.39 Aligned_cols=11 Identities=45% Similarity=1.271 Sum_probs=8.9
Q ss_pred CCCccCCCCCC
Q 010750 39 LDGWNCPRCRG 49 (502)
Q Consensus 39 ~~~W~CP~CRg 49 (502)
...|.||.|+.
T Consensus 74 ~g~W~Cp~C~~ 84 (91)
T 1weu_A 74 RGKWFCPRCSQ 84 (91)
T ss_dssp CSSCCCTTTCC
T ss_pred CCCEECcCccC
Confidence 46899999964
No 95
>3gox_A Restriction endonuclease HPY99I; endonuclease-DNA complex, restriction enzyme, HPY99I, pseudopalindrome; HET: 1PE; 1.50A {Helicobacter pylori} PDB: 3fc3_A*
Probab=29.24 E-value=32 Score=33.00 Aligned_cols=33 Identities=15% Similarity=0.443 Sum_probs=23.3
Q ss_pred ccccchhHHh--hhhccCHHHh---hcCCC-----ccCCCCCC
Q 010750 17 PIKFCHKCLL--NRYGEKAEDA---ALLDG-----WNCPRCRG 49 (502)
Q Consensus 17 ~~~fC~~CL~--nRYge~v~ev---~~~~~-----W~CP~CRg 49 (502)
...+|..|-. .|||...++- ++.-. +.||-|..
T Consensus 103 l~s~CkeC~~~lr~YGIT~eey~~L~e~Qg~~~~~G~C~ICg~ 145 (200)
T 3gox_A 103 TRPSCRECRKNIDGVKLSSTEKKKMDEIAPPKGSVFTCPICEK 145 (200)
T ss_dssp ECSSCHHHHHHHHCSCCCHHHHHHHHTTCCCTTCEEECTTTCC
T ss_pred cCccChhhhhccCCcCCCHHHHHHHHHHcccCCCCCcCcCCCC
Confidence 5789999932 8999888653 23334 78888854
No 96
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=29.11 E-value=12 Score=30.82 Aligned_cols=26 Identities=19% Similarity=0.444 Sum_probs=19.4
Q ss_pred hhhcccCcc----------ccccccccchhHHhhhh
Q 010750 4 VAACKIMKK----------DKYCPIKFCHKCLLNRY 29 (502)
Q Consensus 4 ~~sChqcr~----------~~~C~~~fC~~CL~nRY 29 (502)
+..|..|.. |..|+..||..|..++.
T Consensus 20 ~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~~~ 55 (90)
T 3t7l_A 20 APNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNRKC 55 (90)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEE
T ss_pred CCcCcCCCCcccchhhCccccCCCCEECCcccCCee
Confidence 346877774 47788999999988764
No 97
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.56 E-value=37 Score=27.21 Aligned_cols=41 Identities=22% Similarity=0.521 Sum_probs=28.9
Q ss_pred hhhhcccCcc-------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCCc
Q 010750 3 FVAACKIMKK-------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGI 50 (502)
Q Consensus 3 f~~sChqcr~-------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgi 50 (502)
-...|.+|+. +..|.+.|=..||...+-. ...-.||.||..
T Consensus 14 ~i~~C~IC~~~i~~g~~C~~C~h~fH~~Ci~kWl~~-------~~~~~CP~Cr~~ 61 (74)
T 2ct0_A 14 AVKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQS-------NAEPRCPHCNDY 61 (74)
T ss_dssp SSCBCSSSCCBCSSSEECSSSCCEECHHHHHHHSTT-------CSSCCCTTTCSC
T ss_pred CCCcCcchhhHcccCCccCCCCchhhHHHHHHHHHh-------cCCCCCCCCcCc
Confidence 3456888873 5678889999999976632 123589999864
No 98
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=28.37 E-value=13 Score=29.98 Aligned_cols=26 Identities=27% Similarity=0.650 Sum_probs=20.5
Q ss_pred hhhcccCcc----------ccccccccchhHHhhhh
Q 010750 4 VAACKIMKK----------DKYCPIKFCHKCLLNRY 29 (502)
Q Consensus 4 ~~sChqcr~----------~~~C~~~fC~~CL~nRY 29 (502)
...|..|.. +..|+..||+.|..++.
T Consensus 19 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~~ 54 (82)
T 2yw8_A 19 ATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSNEL 54 (82)
T ss_dssp CCBCTTTCCBCBTTBCCEECTTTCCEECSGGGCEEE
T ss_pred CCcccCcCCcccCccccccCCCCCCEEChHHhCCee
Confidence 346877774 57799999999998765
No 99
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=27.80 E-value=21 Score=33.38 Aligned_cols=11 Identities=18% Similarity=0.616 Sum_probs=9.1
Q ss_pred CCccCCCCCCc
Q 010750 40 DGWNCPRCRGI 50 (502)
Q Consensus 40 ~~W~CP~CRgi 50 (502)
..|+||.|+..
T Consensus 53 ~~y~Cp~C~~~ 63 (183)
T 3lqh_A 53 VAYTCVNCTER 63 (183)
T ss_dssp HCCCCTTTCCS
T ss_pred CeeECcCCCCC
Confidence 48999999874
No 100
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=27.57 E-value=15 Score=29.72 Aligned_cols=26 Identities=23% Similarity=0.448 Sum_probs=20.5
Q ss_pred hhhcccCcc----------ccccccccchhHHhhhh
Q 010750 4 VAACKIMKK----------DKYCPIKFCHKCLLNRY 29 (502)
Q Consensus 4 ~~sChqcr~----------~~~C~~~fC~~CL~nRY 29 (502)
...|..|.. +..|+..||..|...+.
T Consensus 21 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~~ 56 (84)
T 1z2q_A 21 APACNGCGCVFTTTVRRHHCRNCGYVLCGDCSRHRA 56 (84)
T ss_dssp CCBCTTTCCBCCTTSCCEECTTTCCEECTGGGCCEE
T ss_pred CCCCcCcCCccccchhcccccCCCcEEChHHhCCeE
Confidence 456877774 57799999999998764
No 101
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.51 E-value=18 Score=29.22 Aligned_cols=9 Identities=44% Similarity=1.508 Sum_probs=7.9
Q ss_pred CccCCCCCC
Q 010750 41 GWNCPRCRG 49 (502)
Q Consensus 41 ~W~CP~CRg 49 (502)
.|.||.|+.
T Consensus 68 ~W~C~~C~~ 76 (77)
T 2e6s_A 68 YWYCPSCKT 76 (77)
T ss_dssp CCCCTTTCC
T ss_pred CcCCcCccC
Confidence 899999974
No 102
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=27.22 E-value=8.6 Score=29.88 Aligned_cols=39 Identities=26% Similarity=0.622 Sum_probs=25.0
Q ss_pred hhcccCcc------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCC
Q 010750 5 AACKIMKK------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCR 48 (502)
Q Consensus 5 ~sChqcr~------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CR 48 (502)
..|..|+. +..|...|=..||.-.... .....|.||.|.
T Consensus 9 ~~C~vC~~~g~ll~CD~C~~~fH~~Cl~ppl~~-----~P~g~W~C~~C~ 53 (66)
T 1xwh_A 9 DECAVCRDGGELICCDGCPRAFHLACLSPPLRE-----IPSGTWRCSSCL 53 (66)
T ss_dssp CSBSSSSCCSSCEECSSCCCEECTTTSSSCCSS-----CCSSCCCCHHHH
T ss_pred CCCccCCCCCCEEEcCCCChhhcccccCCCcCc-----CCCCCeECcccc
Confidence 46788874 4567777766776532211 245799999885
No 103
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=27.16 E-value=4.8 Score=33.21 Aligned_cols=44 Identities=20% Similarity=0.465 Sum_probs=26.3
Q ss_pred hhcccCccc-----------cccccccchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 5 AACKIMKKD-----------KYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 5 ~sChqcr~~-----------~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
..|..|+.. ..|...|=-.||.-.....+. ......|.||.|+.
T Consensus 17 ~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~-~~p~g~W~C~~C~~ 71 (88)
T 1wev_A 17 LACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEV-NDPRLVWYCARCTR 71 (88)
T ss_dssp CSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHH-HCTTCCCCCHHHHH
T ss_pred CcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCccccccc-CCCCCCeeCccccc
Confidence 468888742 346655556666554432211 13568999999864
No 104
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.10 E-value=12 Score=30.28 Aligned_cols=26 Identities=19% Similarity=0.466 Sum_probs=20.4
Q ss_pred hhhcccCcc----------ccccccccchhHHhhhh
Q 010750 4 VAACKIMKK----------DKYCPIKFCHKCLLNRY 29 (502)
Q Consensus 4 ~~sChqcr~----------~~~C~~~fC~~CL~nRY 29 (502)
...|..|.. +..|+..||..|..++.
T Consensus 14 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~~ 49 (84)
T 1x4u_A 14 FGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSFKV 49 (84)
T ss_dssp CSSCSSSCCCCCSSSCCEECSSSCCEECTTTSCEEE
T ss_pred CCcCcCcCCccccchhhhhhcCCCcEEChhhcCCce
Confidence 356888874 57799999999988764
No 105
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=26.66 E-value=17 Score=29.02 Aligned_cols=42 Identities=31% Similarity=0.637 Sum_probs=26.2
Q ss_pred chhhhcccCcc----------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCC
Q 010750 2 DFVAACKIMKK----------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCR 48 (502)
Q Consensus 2 df~~sChqcr~----------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CR 48 (502)
|-.+.|++|+. +..|...||.+|=. .+.--.....|+|-.||
T Consensus 7 ~d~~~C~iC~KTKFADG~Gh~C~yCk~r~CaRCGg-----~v~lr~~k~~WvC~lC~ 58 (62)
T 2a20_A 7 GDAPTCGICHKTKFADGCGHNCSYCQTKFCARCGG-----RVSLRSNKVMWVCNLCR 58 (62)
T ss_dssp SCCCCCSSSSCSCCCSSCCEEBTTTCCEECTTSEE-----EEESSTTCEEEEEHHHH
T ss_pred CCcchhhhhccceeccCCCccccccCCeeecccCC-----EeeecCCeEEEEehhhh
Confidence 45678999985 46688899988743 22101134567776554
No 106
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=26.12 E-value=15 Score=28.99 Aligned_cols=25 Identities=32% Similarity=0.510 Sum_probs=19.1
Q ss_pred hhcccCcc----------ccccccccchhHHhhhh
Q 010750 5 AACKIMKK----------DKYCPIKFCHKCLLNRY 29 (502)
Q Consensus 5 ~sChqcr~----------~~~C~~~fC~~CL~nRY 29 (502)
..|..|.. +..|+..||+.|..++.
T Consensus 12 ~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs~~~~ 46 (73)
T 1vfy_A 12 DACMICSKKFSLLNRKHHCRSCGGVFCQEHSSNSI 46 (73)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTCCEECGGGSCEEE
T ss_pred CcccCCCCccCCccccccCCCCCEEEcccccCCeE
Confidence 36777764 47799999999997653
No 107
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=26.04 E-value=24 Score=27.66 Aligned_cols=40 Identities=20% Similarity=0.384 Sum_probs=21.9
Q ss_pred hhcccCccc---------cccccccchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 5 AACKIMKKD---------KYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 5 ~sChqcr~~---------~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
..|..|++. ..|..-|=..||...-. ......|.||.|+.
T Consensus 19 ~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~-----~~~~~~w~C~~C~~ 67 (75)
T 2k16_A 19 WICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAA-----PPEEMQWFCPKCAN 67 (75)
T ss_dssp ECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSC-----CCSSSCCCCTTTHH
T ss_pred cCCCCCCCCCCCCCEEEcCCCCcccccccCCCCcc-----CCCCCCEEChhccC
Confidence 357777642 33544444555543221 11346899999963
No 108
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=25.37 E-value=13 Score=30.66 Aligned_cols=26 Identities=27% Similarity=0.420 Sum_probs=20.4
Q ss_pred hhhcccCcc----------ccccccccchhHHhhhh
Q 010750 4 VAACKIMKK----------DKYCPIKFCHKCLLNRY 29 (502)
Q Consensus 4 ~~sChqcr~----------~~~C~~~fC~~CL~nRY 29 (502)
+..|..|.. |..|+..||..|..++.
T Consensus 9 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~~ 44 (88)
T 1wfk_A 9 ESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSFSA 44 (88)
T ss_dssp CSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCEEE
T ss_pred CCCCcCcCCcccCccccccCCCCCCEEChhHcCCce
Confidence 456888874 57799999999998764
No 109
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=25.33 E-value=3.7e+02 Score=24.85 Aligned_cols=39 Identities=15% Similarity=0.159 Sum_probs=15.6
Q ss_pred eeccCcchhhhHHHHHHHHhh-hhHHHHHHHHHHhHHHHHH
Q 010750 380 YHQLNGSKKLKLLNFLCDEAL-GTTVLRNWIDDQNSEFVEK 419 (502)
Q Consensus 380 Y~~L~~s~KLkILn~LCdeaL-tT~~iR~~Ide~~ee~~e~ 419 (502)
|-+|+++.+-+| +.|.++.- .+..+|+.|.....+++++
T Consensus 65 ~LnLT~EQq~ql-~~I~~e~r~~~~~Lr~ql~akr~EL~aL 104 (175)
T 3lay_A 65 GSPLTTEQQATA-QKIYDDYYTQTSALRQQLISKRYEYNAL 104 (175)
T ss_dssp ---CCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666555443 23323221 2334455544444444444
No 110
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.15 E-value=9.6 Score=31.67 Aligned_cols=39 Identities=26% Similarity=0.578 Sum_probs=22.7
Q ss_pred hcccCcc---------ccccccccchhHHhhhhccCHHHhhcCCCccCCCCCC
Q 010750 6 ACKIMKK---------DKYCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRG 49 (502)
Q Consensus 6 sChqcr~---------~~~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRg 49 (502)
.|..|+. |..|...|=..||.-.... .....|.||.|+.
T Consensus 18 ~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~-----~P~g~W~C~~C~~ 65 (92)
T 2e6r_A 18 ICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPE-----IPRGIWRCPKCIL 65 (92)
T ss_dssp CCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSS-----CCSSCCCCHHHHH
T ss_pred CCccCCCcCCCCCEEEcCCCCchhccccCCCCccc-----CCCCCcCCccCcC
Confidence 5777774 2345555555555422211 2457999999863
No 111
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=22.30 E-value=25 Score=30.26 Aligned_cols=43 Identities=23% Similarity=0.570 Sum_probs=26.8
Q ss_pred hcccCcc------cc--ccccccchhHHhhhhccCHHHhhcCCCccCCCCCCcccCcccccc
Q 010750 6 ACKIMKK------DK--YCPIKFCHKCLLNRYGEKAEDAALLDGWNCPRCRGICNCSLCMKK 59 (502)
Q Consensus 6 sChqcr~------~~--~C~~~fC~~CL~nRYge~v~ev~~~~~W~CP~CRgiCNCS~Crrk 59 (502)
.|..|+. +. .|...|=..||. + .......|.||.|+ |..|.+.
T Consensus 17 ~C~~C~~~G~ll~CD~~~Cp~~fH~~Cl~------L-~~~P~g~W~Cp~c~----C~~C~k~ 67 (107)
T 4gne_A 17 YCFQCGDGGELVMCDKKDCPKAYHLLCLN------L-TQPPYGKWECPWHQ----CDECSSA 67 (107)
T ss_dssp SCTTTCCCSEEEECCSTTCCCEECTGGGT------C-SSCCSSCCCCGGGB----CTTTCSB
T ss_pred CCCcCCCCCcEeEECCCCCCcccccccCc------C-CcCCCCCEECCCCC----CCcCCCC
Confidence 4666663 23 677777777774 1 11246789999874 6666443
No 112
>3hfh_A Transcription elongation regulator 1; helix bundle, activator, alternative splicing, coiled coil, nucleus, phosphoprotein, repressor; HET: MLY; 2.70A {Homo sapiens} PDB: 2kis_A 2e71_A 2kiq_A
Probab=21.87 E-value=2.5e+02 Score=25.49 Aligned_cols=35 Identities=17% Similarity=0.290 Sum_probs=27.3
Q ss_pred ccchHHHHHhhhhcCCCCCCCCCCCccccCCcceeccCcchhhhHHHHHHHH
Q 010750 347 KHSWLQALSKCVSNSKCPLNDIPSNCFDCGGDGYHQLNGSKKLKLLNFLCDE 398 (502)
Q Consensus 347 ~~sW~~~L~d~Le~~~~~~kELpld~l~~G~~~Y~~L~~s~KLkILn~LCde 398 (502)
..+|-+.|..++. ...|..|++.++-.+++.-|.+
T Consensus 23 ~~~We~~~~~i~~-----------------Dpry~al~~~eRk~~f~~y~~~ 57 (190)
T 3hfh_A 23 FSTWEXELHXIVF-----------------DPRYLLLNPXERXQVFDQYVXT 57 (190)
T ss_dssp SSCHHHHGGGTTT-----------------SGGGGGSCHHHHHHHHHHHHHH
T ss_pred CCchhhhhhhhcc-----------------CcchhcCChHHHHHHHHHHHHH
Confidence 6889998887764 3349999999999988876644
No 113
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=21.37 E-value=18 Score=28.73 Aligned_cols=11 Identities=45% Similarity=1.271 Sum_probs=8.9
Q ss_pred CCCccCCCCCC
Q 010750 39 LDGWNCPRCRG 49 (502)
Q Consensus 39 ~~~W~CP~CRg 49 (502)
...|.||.|+.
T Consensus 54 ~g~w~Cp~C~~ 64 (71)
T 1wen_A 54 RGKWFCPRCSQ 64 (71)
T ss_dssp SSCCCCTTTSS
T ss_pred CCCEECCCCCc
Confidence 46899999964
Done!