Query 010752
Match_columns 502
No_of_seqs 184 out of 2435
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 04:10:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010752.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010752hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02939 transferase, transfer 100.0 2.5E-61 5.5E-66 530.4 38.7 390 82-502 479-882 (977)
2 PRK14098 glycogen synthase; Pr 100.0 7.5E-60 1.6E-64 505.4 39.2 393 83-502 4-407 (489)
3 PRK14099 glycogen synthase; Pr 100.0 3.4E-59 7.4E-64 499.8 38.3 391 83-502 2-395 (485)
4 TIGR02095 glgA glycogen/starch 100.0 3.4E-55 7.4E-60 469.2 39.1 385 85-502 1-391 (473)
5 PLN02316 synthase/transferase 100.0 1.4E-54 2.9E-59 485.3 39.2 360 77-502 580-945 (1036)
6 PRK00654 glgA glycogen synthas 100.0 1.6E-54 3.6E-59 463.0 38.0 377 85-502 1-382 (466)
7 COG0297 GlgA Glycogen synthase 100.0 1.6E-53 3.4E-58 447.8 32.7 387 85-502 1-394 (487)
8 cd03791 GT1_Glycogen_synthase_ 100.0 1.3E-51 2.8E-56 441.5 39.2 390 86-502 1-396 (476)
9 TIGR02094 more_P_ylases alpha- 100.0 2.1E-36 4.6E-41 328.1 30.4 393 87-502 1-505 (601)
10 PF08323 Glyco_transf_5: Starc 100.0 3.1E-35 6.7E-40 288.2 15.3 235 86-346 1-244 (245)
11 cd04299 GT1_Glycogen_Phosphory 100.0 1E-31 2.2E-36 296.2 30.2 390 86-502 87-594 (778)
12 cd03796 GT1_PIG-A_like This fa 100.0 5.2E-31 1.1E-35 276.1 27.0 289 86-502 1-295 (398)
13 PRK10307 putative glycosyl tra 100.0 1.3E-29 2.9E-34 266.5 31.3 323 85-502 1-333 (412)
14 TIGR03449 mycothiol_MshA UDP-N 100.0 1E-29 2.2E-34 266.2 28.5 313 87-502 1-328 (405)
15 TIGR02468 sucrsPsyn_pln sucros 100.0 1.4E-29 3E-34 283.7 31.0 370 82-502 167-597 (1050)
16 TIGR02472 sucr_P_syn_N sucrose 100.0 2.4E-29 5.1E-34 267.2 30.2 320 99-502 24-366 (439)
17 TIGR02149 glgA_Coryne glycogen 100.0 5E-29 1.1E-33 258.9 29.6 298 85-502 1-306 (388)
18 PLN02871 UDP-sulfoquinovose:DA 100.0 1.3E-28 2.9E-33 263.3 28.9 301 82-502 56-357 (465)
19 TIGR02470 sucr_synth sucrose s 100.0 3.5E-28 7.5E-33 267.7 29.8 348 84-502 255-669 (784)
20 KOG1111 N-acetylglucosaminyltr 100.0 7.5E-30 1.6E-34 250.5 12.6 292 85-502 1-297 (426)
21 cd04962 GT1_like_5 This family 100.0 2.4E-27 5.2E-32 244.2 28.8 292 85-502 1-296 (371)
22 PLN02846 digalactosyldiacylgly 100.0 1.1E-27 2.4E-32 252.1 24.3 316 83-502 3-326 (462)
23 cd03818 GT1_ExpC_like This fam 100.0 6.8E-27 1.5E-31 244.8 30.0 310 86-502 1-326 (396)
24 cd03802 GT1_AviGT4_like This f 100.0 4E-27 8.7E-32 238.6 27.2 264 85-502 1-270 (335)
25 PRK15484 lipopolysaccharide 1, 100.0 4.6E-27 1E-31 245.1 28.4 288 86-502 4-303 (380)
26 cd03805 GT1_ALG2_like This fam 100.0 3.4E-27 7.3E-32 245.5 25.7 308 85-502 1-325 (392)
27 cd03812 GT1_CapH_like This fam 100.0 9.8E-27 2.1E-31 237.9 26.6 288 86-502 1-292 (358)
28 PRK10125 putative glycosyl tra 100.0 2.9E-26 6.2E-31 240.8 27.7 313 85-502 1-332 (405)
29 PRK15427 colanic acid biosynth 100.0 1.4E-26 3E-31 243.5 24.9 203 227-502 118-330 (406)
30 PLN00142 sucrose synthase 100.0 3.6E-26 7.7E-31 251.9 28.7 251 227-502 408-692 (815)
31 cd03800 GT1_Sucrose_synthase T 100.0 6.9E-26 1.5E-30 235.0 29.2 314 85-502 7-328 (398)
32 cd04955 GT1_like_6 This family 99.9 1.9E-25 4.1E-30 228.6 29.9 290 86-502 1-294 (363)
33 cd03819 GT1_WavL_like This fam 99.9 1.3E-25 2.9E-30 229.3 28.1 276 99-502 8-290 (355)
34 PRK09922 UDP-D-galactose:(gluc 99.9 5.4E-26 1.2E-30 235.0 23.9 275 85-502 1-283 (359)
35 cd03792 GT1_Trehalose_phosphor 99.9 1.6E-25 3.5E-30 232.2 27.2 289 86-502 1-299 (372)
36 cd03793 GT1_Glycogen_synthase_ 99.9 5.4E-26 1.2E-30 240.9 23.5 293 88-429 5-326 (590)
37 cd03821 GT1_Bme6_like This fam 99.9 2E-25 4.3E-30 226.5 26.3 301 86-502 1-307 (375)
38 cd04951 GT1_WbdM_like This fam 99.9 3.7E-25 7.9E-30 226.0 28.3 283 86-502 1-288 (360)
39 TIGR03088 stp2 sugar transfera 99.9 2.2E-25 4.9E-30 230.8 26.5 286 85-502 2-298 (374)
40 cd03817 GT1_UGDG_like This fam 99.9 7.8E-25 1.7E-29 222.4 26.8 298 86-502 1-304 (374)
41 cd03795 GT1_like_4 This family 99.9 2E-24 4.3E-29 220.3 29.6 287 86-502 1-291 (357)
42 cd03823 GT1_ExpE7_like This fa 99.9 6.8E-25 1.5E-29 222.2 25.9 288 86-502 1-289 (359)
43 cd03806 GT1_ALG11_like This fa 99.9 2.6E-25 5.6E-30 234.8 22.2 156 309-502 182-350 (419)
44 cd03799 GT1_amsK_like This is 99.9 3.1E-24 6.6E-29 218.8 28.2 277 86-502 1-287 (355)
45 cd03807 GT1_WbnK_like This fam 99.9 3.6E-24 7.8E-29 216.4 27.6 288 86-502 1-294 (365)
46 cd05844 GT1_like_7 Glycosyltra 99.9 1.9E-24 4.1E-29 222.2 24.8 205 227-502 82-296 (367)
47 cd03814 GT1_like_2 This family 99.9 5.9E-24 1.3E-28 216.1 26.3 290 86-502 1-292 (364)
48 cd03794 GT1_wbuB_like This fam 99.9 8.2E-24 1.8E-28 215.4 27.3 316 86-502 1-325 (394)
49 cd03816 GT1_ALG1_like This fam 99.9 1.3E-23 2.8E-28 221.7 29.5 308 84-502 3-343 (415)
50 cd03825 GT1_wcfI_like This fam 99.9 9.2E-24 2E-28 216.1 26.4 279 85-502 1-290 (365)
51 PRK15179 Vi polysaccharide bio 99.9 6.4E-24 1.4E-28 234.0 26.6 211 227-502 400-617 (694)
52 cd03809 GT1_mtfB_like This fam 99.9 3.2E-24 7E-29 218.4 22.0 295 86-502 1-298 (365)
53 cd03801 GT1_YqgM_like This fam 99.9 7.2E-23 1.6E-27 205.9 29.0 297 86-502 1-301 (374)
54 PLN02949 transferase, transfer 99.9 3.7E-23 8.1E-28 220.1 26.2 154 311-502 215-380 (463)
55 cd03820 GT1_amsD_like This fam 99.9 5.5E-23 1.2E-27 206.0 25.7 273 86-502 1-278 (348)
56 cd03811 GT1_WabH_like This fam 99.9 8.6E-23 1.9E-27 204.7 25.0 284 86-502 1-289 (353)
57 cd03822 GT1_ecORF704_like This 99.9 8.2E-23 1.8E-27 208.1 24.1 282 86-502 1-295 (366)
58 cd03808 GT1_cap1E_like This fa 99.9 3.3E-22 7.2E-27 201.3 27.7 285 86-502 1-289 (359)
59 cd03798 GT1_wlbH_like This fam 99.9 3.7E-22 8E-27 201.6 27.8 299 87-502 1-304 (377)
60 PRK15490 Vi polysaccharide bio 99.9 2.7E-22 5.8E-27 212.8 26.2 156 316-502 339-498 (578)
61 PLN02501 digalactosyldiacylgly 99.9 1.5E-22 3.1E-27 217.0 20.4 144 317-502 499-644 (794)
62 PLN02275 transferase, transfer 99.9 2.8E-21 6E-26 201.0 29.4 208 227-502 100-335 (371)
63 cd03813 GT1_like_3 This family 99.9 2.6E-22 5.7E-27 215.3 18.0 216 227-502 173-396 (475)
64 cd03804 GT1_wbaZ_like This fam 99.9 1.5E-21 3.4E-26 200.3 20.2 141 309-502 146-286 (351)
65 TIGR03087 stp1 sugar transfera 99.9 4.4E-22 9.5E-27 208.6 15.1 153 309-502 165-324 (397)
66 PHA01633 putative glycosyl tra 99.9 3.4E-20 7.3E-25 188.6 24.5 157 308-502 84-249 (335)
67 cd03788 GT1_TPS Trehalose-6-Ph 99.8 3E-20 6.6E-25 198.3 14.8 224 228-502 132-386 (460)
68 TIGR02400 trehalose_OtsA alpha 99.8 1.7E-19 3.6E-24 191.7 19.5 226 227-502 126-381 (456)
69 PRK00726 murG undecaprenyldiph 99.8 2.3E-18 5E-23 177.7 26.5 272 85-502 2-274 (357)
70 TIGR02918 accessory Sec system 99.8 3.5E-19 7.7E-24 191.4 19.8 146 314-502 268-418 (500)
71 cd03785 GT1_MurG MurG is an N- 99.8 8E-18 1.7E-22 172.6 26.5 272 86-502 1-274 (350)
72 cd04946 GT1_AmsK_like This fam 99.8 1.9E-18 4.2E-23 181.9 21.6 201 227-502 127-336 (407)
73 TIGR01133 murG undecaprenyldip 99.8 1.2E-17 2.5E-22 171.2 25.3 271 85-502 1-272 (348)
74 PHA01630 putative group 1 glyc 99.8 9.5E-19 2.1E-23 179.0 15.7 148 308-502 85-235 (331)
75 cd04949 GT1_gtfA_like This fam 99.8 9.8E-18 2.1E-22 173.4 18.2 147 313-502 154-304 (372)
76 PRK13609 diacylglycerol glucos 99.8 7.9E-17 1.7E-21 167.8 24.2 150 314-502 145-295 (380)
77 cd01635 Glycosyltransferase_GT 99.7 1.3E-16 2.9E-21 151.1 20.5 94 407-502 109-207 (229)
78 PLN03063 alpha,alpha-trehalose 99.7 2.2E-17 4.8E-22 185.9 16.5 225 228-502 147-401 (797)
79 PF05693 Glycogen_syn: Glycoge 99.7 4.2E-17 9.2E-22 172.4 17.4 294 90-429 2-321 (633)
80 PLN02605 monogalactosyldiacylg 99.7 1.9E-16 4E-21 165.4 21.2 150 314-502 148-304 (382)
81 PRK14501 putative bifunctional 99.7 1E-16 2.2E-21 180.3 14.7 225 227-501 132-386 (726)
82 TIGR02398 gluc_glyc_Psyn gluco 99.7 1.1E-15 2.3E-20 162.4 18.2 225 227-501 131-406 (487)
83 PRK05749 3-deoxy-D-manno-octul 99.7 6E-15 1.3E-19 156.1 21.6 159 309-502 171-346 (425)
84 cd04950 GT1_like_1 Glycosyltra 99.6 7.9E-14 1.7E-18 145.1 25.1 155 308-502 145-304 (373)
85 PRK13608 diacylglycerol glucos 99.6 7.6E-14 1.6E-18 146.3 23.0 149 315-502 146-295 (391)
86 PF00534 Glycos_transf_1: Glyc 99.5 9.4E-14 2E-18 127.8 13.1 112 387-502 2-118 (172)
87 cd03786 GT1_UDP-GlcNAc_2-Epime 99.5 8.2E-13 1.8E-17 136.3 18.5 153 314-502 139-298 (363)
88 PRK00025 lpxB lipid-A-disaccha 99.5 9E-13 1.9E-17 137.1 18.4 145 314-502 132-282 (380)
89 PF13439 Glyco_transf_4: Glyco 99.5 4.4E-13 9.5E-18 122.4 11.4 176 87-362 1-176 (177)
90 TIGR00236 wecB UDP-N-acetylglu 99.5 3E-12 6.5E-17 132.7 19.1 203 227-502 86-295 (365)
91 PLN03064 alpha,alpha-trehalose 99.4 1.7E-12 3.6E-17 146.5 16.8 225 227-501 230-484 (934)
92 PF13579 Glyco_trans_4_4: Glyc 99.4 8.2E-13 1.8E-17 118.5 11.0 159 101-356 1-160 (160)
93 TIGR00215 lpxB lipid-A-disacch 99.4 1.2E-10 2.7E-15 121.8 23.4 146 314-502 136-288 (385)
94 PRK09814 beta-1,6-galactofuran 99.3 6.7E-10 1.4E-14 114.0 24.3 137 308-502 115-262 (333)
95 KOG0853 Glycosyltransferase [C 99.3 1.1E-10 2.3E-15 122.6 16.1 167 314-502 207-391 (495)
96 COG0438 RfaG Glycosyltransfera 99.1 1E-09 2.2E-14 108.6 15.4 149 316-502 150-302 (381)
97 KOG1387 Glycosyltransferase [C 99.1 1.5E-09 3.3E-14 107.3 14.6 148 315-501 221-381 (465)
98 PF13692 Glyco_trans_1_4: Glyc 99.1 3.1E-10 6.7E-15 100.1 7.0 92 402-502 2-97 (135)
99 PRK10117 trehalose-6-phosphate 99.0 6E-09 1.3E-13 110.2 15.1 224 227-501 122-376 (474)
100 PF00982 Glyco_transf_20: Glyc 99.0 1.5E-08 3.3E-13 108.2 17.9 226 227-501 140-397 (474)
101 COG0058 GlgP Glucan phosphoryl 98.9 2.5E-08 5.5E-13 109.2 14.7 382 100-502 114-604 (750)
102 PRK12446 undecaprenyldiphospho 98.9 1.2E-06 2.6E-11 90.6 26.0 101 388-502 173-274 (352)
103 PLN02205 alpha,alpha-trehalose 98.9 2.5E-08 5.4E-13 113.3 14.3 223 229-500 203-459 (854)
104 PF09314 DUF1972: Domain of un 98.8 1.3E-07 2.7E-12 88.3 16.3 182 85-358 2-185 (185)
105 COG0380 OtsA Trehalose-6-phosp 98.8 2.2E-07 4.8E-12 98.1 18.0 222 228-499 148-401 (486)
106 PRK14986 glycogen phosphorylas 98.7 1.4E-06 2.9E-11 97.0 20.8 268 228-502 313-669 (815)
107 KOG2941 Beta-1,4-mannosyltrans 98.7 4.7E-06 1E-10 83.1 22.3 235 227-502 103-367 (444)
108 PF13477 Glyco_trans_4_2: Glyc 98.6 6.1E-07 1.3E-11 79.5 12.7 109 86-269 1-110 (139)
109 cd04300 GT1_Glycogen_Phosphory 98.6 4.2E-06 9.1E-11 93.3 21.3 264 227-502 300-656 (797)
110 KOG3742 Glycogen synthase [Car 98.5 3.7E-08 8.1E-13 100.2 2.8 170 228-428 174-351 (692)
111 COG0707 MurG UDP-N-acetylgluco 98.5 4.6E-05 1E-09 78.8 24.7 272 85-502 1-274 (357)
112 TIGR03590 PseG pseudaminic aci 98.5 2.9E-05 6.2E-10 77.8 21.9 91 402-502 171-262 (279)
113 PRK14985 maltodextrin phosphor 98.4 1.3E-05 2.8E-10 89.1 19.3 268 227-502 302-655 (798)
114 TIGR03713 acc_sec_asp1 accesso 98.4 2.2E-06 4.8E-11 92.9 13.0 98 403-502 320-453 (519)
115 TIGR02093 P_ylase glycogen/sta 98.4 3.3E-06 7.2E-11 93.7 14.5 264 228-502 298-653 (794)
116 PF00343 Phosphorylase: Carboh 98.3 2.9E-06 6.4E-11 93.2 11.6 262 230-502 216-570 (713)
117 PF13528 Glyco_trans_1_3: Glyc 98.3 8.9E-05 1.9E-09 75.1 19.9 81 401-502 192-272 (318)
118 TIGR02919 accessory Sec system 98.1 2.4E-05 5.2E-10 83.1 12.0 89 403-502 283-373 (438)
119 PF12000 Glyco_trans_4_3: Gkyc 98.0 0.0001 2.2E-09 68.0 13.5 130 193-362 39-170 (171)
120 PF04007 DUF354: Protein of un 97.9 0.0013 2.7E-08 67.5 20.3 134 314-502 123-269 (335)
121 TIGR03568 NeuC_NnaA UDP-N-acet 97.7 0.0027 5.9E-08 66.1 18.9 201 227-502 93-302 (365)
122 COG0763 LpxB Lipid A disacchar 97.7 0.001 2.2E-08 68.1 15.0 217 194-502 61-285 (381)
123 cd03784 GT1_Gtf_like This fami 97.6 0.0098 2.1E-07 62.2 22.2 84 401-502 239-326 (401)
124 PRK01021 lpxB lipid-A-disaccha 97.5 0.017 3.7E-07 63.1 22.4 144 314-502 359-509 (608)
125 TIGR00661 MJ1255 conserved hyp 97.4 0.0094 2E-07 60.8 18.5 79 404-502 191-269 (321)
126 PF02684 LpxB: Lipid-A-disacch 97.4 0.011 2.3E-07 61.6 18.6 146 314-502 131-281 (373)
127 PF02350 Epimerase_2: UDP-N-ac 97.2 0.0038 8.3E-08 64.5 12.4 206 227-502 67-279 (346)
128 TIGR03492 conserved hypothetic 97.2 0.066 1.4E-06 56.4 21.7 140 314-502 158-317 (396)
129 COG3660 Predicted nucleoside-d 96.7 0.28 6E-06 48.0 19.0 105 390-502 152-267 (329)
130 PHA03392 egt ecdysteroid UDP-g 96.6 0.42 9E-06 52.1 22.0 83 402-502 297-386 (507)
131 COG1817 Uncharacterized protei 96.5 0.18 3.8E-06 50.6 16.7 145 313-502 123-273 (346)
132 COG1519 KdtA 3-deoxy-D-manno-o 96.3 0.67 1.5E-05 48.5 20.3 160 307-502 168-344 (419)
133 PF00862 Sucrose_synth: Sucros 96.2 0.015 3.4E-07 61.5 8.0 35 227-269 401-435 (550)
134 PF13844 Glyco_transf_41: Glyc 95.5 0.086 1.9E-06 56.3 10.4 106 391-502 276-386 (468)
135 PF11997 DUF3492: Domain of un 94.7 0.089 1.9E-06 52.4 7.3 43 85-128 1-43 (268)
136 PRK14089 ipid-A-disaccharide s 94.7 0.52 1.1E-05 48.7 12.9 85 404-502 170-256 (347)
137 COG1819 Glycosyl transferases, 94.2 2.1 4.6E-05 45.2 16.7 83 404-502 240-322 (406)
138 COG3914 Spy Predicted O-linked 93.6 0.46 9.9E-06 51.3 10.0 107 391-502 421-533 (620)
139 PF06258 Mito_fiss_Elm1: Mitoc 93.6 1.8 4E-05 44.0 14.2 110 387-502 134-251 (311)
140 PRK10017 colanic acid biosynth 93.5 12 0.00026 39.8 23.8 80 418-502 260-348 (426)
141 COG0381 WecB UDP-N-acetylgluco 92.0 14 0.0003 38.5 18.0 149 316-502 145-302 (383)
142 PF12038 DUF3524: Domain of un 92.0 1.1 2.3E-05 41.1 8.8 26 306-333 111-136 (168)
143 PF06925 MGDG_synth: Monogalac 91.7 0.68 1.5E-05 42.5 7.6 26 315-343 136-161 (169)
144 PF08288 PIGA: PIGA (GPI ancho 91.0 0.89 1.9E-05 37.0 6.4 35 227-268 50-85 (90)
145 KOG1050 Trehalose-6-phosphate 90.4 6.7 0.00015 44.5 15.0 222 228-500 141-396 (732)
146 PRK02797 4-alpha-L-fucosyltran 88.9 29 0.00063 35.2 18.6 100 402-502 145-252 (322)
147 COG4671 Predicted glycosyl tra 88.0 35 0.00077 35.2 22.5 91 402-502 220-316 (400)
148 TIGR02195 heptsyl_trn_II lipop 87.9 3.6 7.7E-05 42.0 10.1 93 387-483 161-258 (334)
149 COG3980 spsG Spore coat polysa 87.6 33 0.00071 34.4 18.5 88 403-502 160-248 (318)
150 TIGR01426 MGT glycosyltransfer 87.4 3.2 6.9E-05 43.3 9.5 84 403-502 227-313 (392)
151 PF01975 SurE: Survival protei 85.8 0.82 1.8E-05 43.3 3.6 39 85-130 1-39 (196)
152 PF10087 DUF2325: Uncharacteri 84.5 2.2 4.8E-05 35.3 5.3 68 434-502 2-77 (97)
153 cd03789 GT1_LPS_heptosyltransf 83.9 6.1 0.00013 39.1 9.2 92 404-502 124-219 (279)
154 PF02951 GSH-S_N: Prokaryotic 83.5 1.4 3E-05 38.3 3.7 40 85-127 1-40 (119)
155 PRK10422 lipopolysaccharide co 82.5 16 0.00035 37.5 11.9 83 402-484 184-270 (352)
156 PF07429 Glyco_transf_56: 4-al 82.0 66 0.0014 33.2 19.3 100 402-502 184-291 (360)
157 PF04464 Glyphos_transf: CDP-G 82.0 6.2 0.00014 40.8 8.7 154 311-502 129-290 (369)
158 TIGR02201 heptsyl_trn_III lipo 79.9 27 0.00059 35.6 12.5 80 404-483 184-267 (344)
159 PF11440 AGT: DNA alpha-glucos 79.8 70 0.0015 32.1 16.4 96 406-501 187-304 (355)
160 TIGR03609 S_layer_CsaB polysac 78.2 18 0.00039 36.2 10.3 97 401-502 171-271 (298)
161 PF03033 Glyco_transf_28: Glyc 76.1 4.1 9E-05 35.4 4.5 21 107-127 15-35 (139)
162 TIGR00696 wecB_tagA_cpsF bacte 72.8 17 0.00036 33.9 7.7 69 415-483 32-107 (177)
163 COG0859 RfaF ADP-heptose:LPS h 72.6 22 0.00048 36.4 9.4 82 402-485 175-260 (334)
164 PF01075 Glyco_transf_9: Glyco 72.2 13 0.00028 35.8 7.3 82 403-484 107-191 (247)
165 PF03808 Glyco_tran_WecB: Glyc 70.4 20 0.00042 33.1 7.7 71 412-483 29-108 (172)
166 TIGR02193 heptsyl_trn_I lipopo 70.4 48 0.001 33.3 11.2 79 404-484 182-262 (319)
167 PF12683 DUF3798: Protein of u 67.8 62 0.0013 32.1 10.6 109 381-496 14-125 (275)
168 PRK10037 cell division protein 65.4 7.3 0.00016 38.0 4.0 35 85-125 1-37 (250)
169 PRK06249 2-dehydropantoate 2-r 64.2 9.1 0.0002 38.8 4.5 35 82-127 3-37 (313)
170 cd06533 Glyco_transf_WecG_TagA 64.0 29 0.00063 31.9 7.4 71 412-483 27-106 (171)
171 PRK03692 putative UDP-N-acetyl 63.5 26 0.00057 34.3 7.3 69 415-483 89-164 (243)
172 PF08660 Alg14: Oligosaccharid 63.4 97 0.0021 28.5 10.7 37 227-265 92-128 (170)
173 PRK10916 ADP-heptose:LPS hepto 63.0 49 0.0011 33.9 9.7 91 389-483 169-268 (348)
174 PRK00207 sulfur transfer compl 63.0 14 0.0003 32.4 4.8 38 85-125 1-39 (128)
175 PF02374 ArsA_ATPase: Anion-tr 62.9 7.6 0.00017 39.4 3.6 37 85-128 1-39 (305)
176 PF04413 Glycos_transf_N: 3-De 62.6 48 0.001 31.0 8.7 39 308-355 141-179 (186)
177 PF05159 Capsule_synth: Capsul 62.0 31 0.00068 33.9 7.8 94 399-502 114-220 (269)
178 COG1703 ArgK Putative periplas 59.8 1.6E+02 0.0035 29.9 12.0 27 101-127 62-88 (323)
179 PF09949 DUF2183: Uncharacteri 57.1 32 0.0007 28.8 5.8 33 430-462 63-95 (100)
180 COG2910 Putative NADH-flavin r 55.3 17 0.00037 34.1 4.1 35 85-129 1-35 (211)
181 PRK10964 ADP-heptose:LPS hepto 54.2 95 0.0021 31.3 10.0 82 401-484 177-261 (322)
182 PRK13849 putative crown gall t 53.6 17 0.00038 35.2 4.2 37 85-127 1-39 (231)
183 PRK13932 stationary phase surv 53.3 16 0.00035 36.1 3.9 39 83-129 4-42 (257)
184 CHL00072 chlL photochlorophyll 53.2 14 0.0003 37.2 3.6 34 85-126 1-36 (290)
185 TIGR00087 surE 5'/3'-nucleotid 52.8 16 0.00035 35.8 3.8 37 85-129 1-37 (244)
186 PF00551 Formyl_trans_N: Formy 52.7 55 0.0012 30.2 7.3 34 85-127 1-36 (181)
187 PRK09271 flavodoxin; Provision 51.9 26 0.00056 31.7 4.9 36 85-125 1-36 (160)
188 PF04101 Glyco_tran_28_C: Glyc 51.7 13 0.00028 33.6 2.8 39 458-502 56-94 (167)
189 COG4635 HemG Flavodoxin [Energ 51.6 22 0.00048 32.4 4.1 36 85-125 1-36 (175)
190 PF03358 FMN_red: NADPH-depend 51.1 27 0.00058 30.9 4.8 40 85-127 1-40 (152)
191 TIGR01380 glut_syn glutathione 51.0 14 0.0003 37.5 3.2 40 85-127 1-40 (312)
192 TIGR01007 eps_fam capsular exo 49.8 29 0.00063 32.5 5.0 38 85-126 17-54 (204)
193 PRK06756 flavodoxin; Provision 49.6 31 0.00067 30.6 4.9 36 85-125 2-37 (148)
194 TIGR01281 DPOR_bchL light-inde 49.1 19 0.00041 35.4 3.8 33 85-125 1-35 (268)
195 PRK14619 NAD(P)H-dependent gly 48.2 24 0.00051 35.7 4.4 35 82-127 2-36 (308)
196 PRK12921 2-dehydropantoate 2-r 47.9 20 0.00044 35.8 3.8 31 85-126 1-31 (305)
197 PRK13869 plasmid-partitioning 47.3 22 0.00048 37.6 4.1 36 84-125 120-157 (405)
198 PRK13935 stationary phase surv 46.6 22 0.00047 35.1 3.6 38 85-130 1-38 (253)
199 PRK05708 2-dehydropantoate 2-r 46.6 25 0.00054 35.5 4.3 33 84-127 2-34 (305)
200 PLN00016 RNA-binding protein; 45.8 27 0.00058 36.2 4.5 38 84-127 52-89 (378)
201 KOG2452 Formyltetrahydrofolate 45.7 31 0.00067 36.6 4.7 32 85-127 1-32 (881)
202 PF00205 TPP_enzyme_M: Thiamin 45.6 54 0.0012 28.5 5.8 20 464-483 65-84 (137)
203 TIGR03453 partition_RepA plasm 45.4 26 0.00056 36.7 4.3 38 83-126 102-141 (387)
204 PRK08305 spoVFB dipicolinate s 45.4 39 0.00084 32.0 5.0 37 83-127 4-42 (196)
205 PRK06522 2-dehydropantoate 2-r 45.1 26 0.00055 34.9 4.1 32 85-127 1-32 (304)
206 COG0496 SurE Predicted acid ph 45.0 23 0.0005 34.8 3.5 37 85-129 1-37 (252)
207 PRK13933 stationary phase surv 45.0 24 0.00052 34.8 3.6 37 85-129 1-37 (253)
208 TIGR03371 cellulose_yhjQ cellu 44.7 26 0.00057 33.6 4.0 37 85-127 1-39 (246)
209 COG1192 Soj ATPases involved i 44.4 31 0.00066 33.7 4.4 36 85-126 2-40 (259)
210 PRK14618 NAD(P)H-dependent gly 43.7 30 0.00064 35.2 4.3 34 83-127 3-36 (328)
211 PRK05866 short chain dehydroge 43.6 43 0.00092 33.4 5.4 35 83-127 39-73 (293)
212 PRK09739 hypothetical protein; 42.9 51 0.0011 30.9 5.5 41 83-126 2-42 (199)
213 COG1922 WecG Teichoic acid bio 42.9 1E+02 0.0023 30.4 7.7 71 413-483 90-168 (253)
214 PF12996 DUF3880: DUF based on 41.8 39 0.00084 26.8 3.8 43 313-366 15-57 (79)
215 PRK05718 keto-hydroxyglutarate 41.7 2.1E+02 0.0045 27.4 9.4 73 414-486 23-97 (212)
216 cd02040 NifH NifH gene encodes 41.7 30 0.00065 33.8 3.9 26 101-126 10-37 (270)
217 PRK13934 stationary phase surv 41.6 29 0.00062 34.5 3.6 37 85-129 1-37 (266)
218 PRK05246 glutathione synthetas 41.4 24 0.00051 35.9 3.2 40 85-127 2-41 (316)
219 TIGR01915 npdG NADPH-dependent 40.8 36 0.00079 32.4 4.2 31 85-126 1-32 (219)
220 PF09140 MipZ: ATPase MipZ; I 40.7 30 0.00066 34.1 3.5 29 99-127 8-38 (261)
221 PRK00346 surE 5'(3')-nucleotid 40.6 32 0.00068 33.9 3.7 37 85-129 1-37 (250)
222 COG0003 ArsA Predicted ATPase 40.3 45 0.00096 34.2 4.9 36 85-127 2-39 (322)
223 COG1763 MobB Molybdopterin-gua 40.2 48 0.001 30.4 4.6 40 84-128 1-40 (161)
224 PLN02927 antheraxanthin epoxid 40.0 45 0.00097 37.7 5.3 33 82-125 79-111 (668)
225 PF06564 YhjQ: YhjQ protein; 39.9 45 0.00098 32.7 4.7 36 85-126 1-38 (243)
226 PF00201 UDPGT: UDP-glucoronos 39.9 11 0.00023 40.7 0.4 83 403-502 278-363 (500)
227 cd02032 Bchl_like This family 39.0 32 0.00069 33.8 3.6 34 85-126 1-36 (267)
228 PRK13234 nifH nitrogenase redu 38.9 40 0.00086 33.9 4.3 36 83-125 2-39 (295)
229 TIGR01754 flav_RNR ribonucleot 38.7 49 0.0011 29.1 4.4 34 85-123 1-34 (140)
230 PRK08229 2-dehydropantoate 2-r 38.4 36 0.00077 34.7 4.0 32 84-126 2-33 (341)
231 PRK04155 chaperone protein Hch 38.3 60 0.0013 32.7 5.4 49 80-128 45-100 (287)
232 COG0716 FldA Flavodoxins [Ener 38.2 46 0.00099 29.7 4.2 36 84-124 1-36 (151)
233 COG4641 Uncharacterized protei 37.8 5E+02 0.011 27.2 14.5 28 100-127 13-40 (373)
234 TIGR01968 minD_bact septum sit 37.6 40 0.00086 32.6 4.0 26 100-125 10-37 (261)
235 cd03146 GAT1_Peptidase_E Type 37.4 2.5E+02 0.0053 26.6 9.3 71 414-484 14-88 (212)
236 PLN02572 UDP-sulfoquinovose sy 36.7 52 0.0011 35.2 5.0 34 82-125 45-78 (442)
237 PRK13232 nifH nitrogenase redu 35.8 39 0.00085 33.3 3.7 26 100-125 9-36 (273)
238 PF00185 OTCace: Aspartate/orn 35.5 42 0.00092 30.4 3.5 36 84-128 2-37 (158)
239 PHA02519 plasmid partition pro 35.5 46 0.001 35.0 4.3 36 84-125 105-142 (387)
240 PRK14620 NAD(P)H-dependent gly 35.3 45 0.00097 33.8 4.1 32 85-127 1-32 (326)
241 PF01113 DapB_N: Dihydrodipico 34.9 53 0.0012 28.3 3.9 34 469-502 60-93 (124)
242 COG0300 DltE Short-chain dehyd 34.5 57 0.0012 32.4 4.5 27 100-129 15-41 (265)
243 PRK13235 nifH nitrogenase redu 34.4 47 0.001 32.8 3.9 26 100-125 9-36 (274)
244 PLN00141 Tic62-NAD(P)-related 33.9 53 0.0012 31.7 4.2 34 83-126 16-49 (251)
245 PF02441 Flavoprotein: Flavopr 33.8 52 0.0011 28.5 3.7 35 85-126 1-35 (129)
246 PRK11104 hemG protoporphyrinog 33.6 54 0.0012 30.3 3.9 35 85-125 1-35 (177)
247 PRK10427 putative PTS system f 33.2 79 0.0017 27.1 4.6 38 85-127 3-42 (114)
248 PRK06703 flavodoxin; Provision 32.8 80 0.0017 28.0 4.9 36 85-125 2-37 (151)
249 COG0512 PabA Anthranilate/para 32.6 53 0.0012 30.9 3.7 33 84-126 1-33 (191)
250 PLN02448 UDP-glycosyltransfera 32.6 2.3E+02 0.005 30.4 9.2 86 403-502 276-363 (459)
251 PF02525 Flavodoxin_2: Flavodo 32.5 65 0.0014 30.0 4.4 37 85-124 1-39 (199)
252 PRK00094 gpsA NAD(P)H-dependen 32.5 55 0.0012 32.9 4.2 32 85-127 2-33 (325)
253 PRK10538 malonic semialdehyde 32.3 58 0.0013 31.2 4.2 32 85-126 1-32 (248)
254 PRK00211 sulfur relay protein 32.1 78 0.0017 27.3 4.4 39 85-127 2-41 (119)
255 PRK13230 nitrogenase reductase 32.0 56 0.0012 32.3 4.0 26 100-125 9-36 (279)
256 CHL00194 ycf39 Ycf39; Provisio 31.9 55 0.0012 32.9 4.1 33 85-127 1-33 (317)
257 COG2894 MinD Septum formation 31.8 45 0.00098 32.3 3.1 36 86-127 3-40 (272)
258 PRK10446 ribosomal protein S6 31.8 54 0.0012 32.8 4.0 35 85-127 1-35 (300)
259 PHA02518 ParA-like protein; Pr 31.7 53 0.0011 30.5 3.7 33 85-124 1-35 (211)
260 COG1090 Predicted nucleoside-d 31.6 39 0.00085 33.8 2.7 31 99-129 3-33 (297)
261 TIGR00639 PurN phosphoribosylg 31.5 2.2E+02 0.0047 26.7 7.7 34 85-127 1-36 (190)
262 PRK13185 chlL protochlorophyll 31.4 56 0.0012 32.0 3.9 26 100-125 10-37 (270)
263 PRK12827 short chain dehydroge 31.4 62 0.0013 30.6 4.2 33 84-126 6-38 (249)
264 PRK07417 arogenate dehydrogena 30.9 68 0.0015 31.8 4.4 32 85-127 1-32 (279)
265 PF09587 PGA_cap: Bacterial ca 30.9 4.5E+02 0.0098 25.4 10.2 50 78-129 122-194 (250)
266 PRK12825 fabG 3-ketoacyl-(acyl 30.9 67 0.0014 30.2 4.3 34 84-127 6-39 (249)
267 PRK10675 UDP-galactose-4-epime 30.7 59 0.0013 32.7 4.1 31 85-125 1-31 (338)
268 TIGR00288 conserved hypothetic 30.6 1.9E+02 0.0041 26.5 6.8 65 417-483 91-155 (160)
269 PRK07023 short chain dehydroge 30.6 68 0.0015 30.5 4.3 32 85-126 2-33 (243)
270 PRK13931 stationary phase surv 30.1 60 0.0013 32.2 3.8 39 85-130 1-42 (261)
271 PRK11670 antiporter inner memb 30.0 64 0.0014 33.7 4.2 36 84-125 106-143 (369)
272 PRK05647 purN phosphoribosylgl 29.7 1.6E+02 0.0035 27.8 6.6 34 85-127 2-37 (200)
273 COG4007 Predicted dehydrogenas 29.7 36 0.00078 33.6 2.1 32 100-136 31-63 (340)
274 COG1553 DsrE Uncharacterized c 29.4 1.1E+02 0.0024 26.8 4.7 38 85-125 1-39 (126)
275 PRK05653 fabG 3-ketoacyl-(acyl 29.2 75 0.0016 29.9 4.3 33 85-127 6-38 (246)
276 PLN02695 GDP-D-mannose-3',5'-e 29.1 69 0.0015 33.2 4.3 34 83-126 20-53 (370)
277 PF03721 UDPG_MGDP_dh_N: UDP-g 29.0 61 0.0013 30.2 3.5 30 85-125 1-30 (185)
278 PRK06753 hypothetical protein; 28.6 49 0.0011 33.9 3.1 30 85-125 1-30 (373)
279 PRK10669 putative cation:proto 28.6 1.5E+02 0.0032 32.7 7.0 24 104-127 426-449 (558)
280 PRK10818 cell division inhibit 28.4 77 0.0017 31.0 4.4 28 100-127 11-40 (270)
281 TIGR01426 MGT glycosyltransfer 28.1 42 0.00092 34.8 2.5 21 107-127 12-32 (392)
282 PF07015 VirC1: VirC1 protein; 28.0 73 0.0016 31.0 3.9 36 100-135 10-47 (231)
283 PF10727 Rossmann-like: Rossma 28.0 30 0.00066 30.3 1.2 35 82-127 8-42 (127)
284 PRK05723 flavodoxin; Provision 27.8 93 0.002 28.0 4.4 35 85-124 1-35 (151)
285 PRK13886 conjugal transfer pro 27.7 79 0.0017 31.0 4.1 36 85-126 2-39 (241)
286 COG0159 TrpA Tryptophan syntha 27.7 5.6E+02 0.012 25.5 10.0 80 400-482 93-175 (265)
287 PRK13705 plasmid-partitioning 27.4 84 0.0018 33.0 4.6 36 84-125 105-142 (388)
288 PRK06849 hypothetical protein; 27.4 76 0.0016 33.1 4.3 35 83-127 3-37 (389)
289 KOG1209 1-Acyl dihydroxyaceton 27.4 92 0.002 30.1 4.3 36 83-127 6-41 (289)
290 CHL00175 minD septum-site dete 27.4 1.1E+02 0.0023 30.3 5.2 35 85-125 15-51 (281)
291 PRK07364 2-octaprenyl-6-methox 27.3 59 0.0013 33.9 3.5 38 77-125 11-48 (415)
292 PRK08340 glucose-1-dehydrogena 27.1 79 0.0017 30.5 4.1 32 85-126 1-32 (259)
293 COG0702 Predicted nucleoside-d 27.0 85 0.0019 30.2 4.4 31 101-131 7-37 (275)
294 PRK05693 short chain dehydroge 27.0 86 0.0019 30.5 4.4 34 85-127 1-34 (274)
295 PRK13236 nitrogenase reductase 26.7 81 0.0018 31.7 4.2 35 84-125 5-41 (296)
296 PF13614 AAA_31: AAA domain; P 26.6 1.1E+02 0.0024 26.8 4.7 28 100-127 11-38 (157)
297 PRK05583 ribosomal protein L7A 26.5 3.9E+02 0.0084 22.4 8.2 77 416-497 21-98 (104)
298 PLN02712 arogenate dehydrogena 26.5 1.1E+02 0.0023 34.8 5.4 35 82-127 50-84 (667)
299 TIGR03018 pepcterm_TyrKin exop 26.4 1.3E+02 0.0027 28.3 5.2 39 84-126 34-73 (207)
300 PRK08163 salicylate hydroxylas 26.2 65 0.0014 33.4 3.5 32 83-125 3-34 (396)
301 PF10093 DUF2331: Uncharacteri 26.0 2.8E+02 0.006 29.1 7.9 94 384-483 165-270 (374)
302 PF03446 NAD_binding_2: NAD bi 26.0 93 0.002 28.0 4.1 31 84-125 1-31 (163)
303 PRK06180 short chain dehydroge 25.9 95 0.0021 30.3 4.5 24 100-126 13-36 (277)
304 PRK07577 short chain dehydroge 25.9 1E+02 0.0022 29.0 4.5 34 84-127 3-36 (234)
305 cd06533 Glyco_transf_WecG_TagA 25.7 2.7E+02 0.0059 25.4 7.2 53 407-459 75-127 (171)
306 PF01210 NAD_Gly3P_dh_N: NAD-d 25.6 64 0.0014 29.0 2.9 20 108-127 12-31 (157)
307 PRK05884 short chain dehydroge 25.4 99 0.0021 29.2 4.4 33 85-127 1-33 (223)
308 PRK14494 putative molybdopteri 25.4 1.1E+02 0.0025 29.6 4.7 39 85-128 1-39 (229)
309 TIGR01969 minD_arch cell divis 25.2 1.1E+02 0.0023 29.3 4.6 27 100-126 9-37 (251)
310 TIGR03029 EpsG chain length de 24.9 1.3E+02 0.0028 29.6 5.2 38 84-125 102-139 (274)
311 PRK07236 hypothetical protein; 24.7 73 0.0016 33.0 3.6 32 83-125 5-36 (386)
312 PRK07231 fabG 3-ketoacyl-(acyl 24.5 1E+02 0.0022 29.2 4.3 34 84-127 5-38 (251)
313 PRK07308 flavodoxin; Validated 24.5 1.1E+02 0.0024 26.9 4.3 26 99-124 11-36 (146)
314 PLN02256 arogenate dehydrogena 24.5 1.1E+02 0.0023 31.0 4.6 35 82-127 34-68 (304)
315 PF03808 Glyco_tran_WecB: Glyc 24.4 3.2E+02 0.0069 24.9 7.4 41 416-459 89-129 (172)
316 TIGR01768 GGGP-family geranylg 24.3 53 0.0011 31.8 2.2 71 411-486 6-81 (223)
317 TIGR02622 CDP_4_6_dhtase CDP-g 24.1 97 0.0021 31.5 4.3 32 84-125 4-35 (349)
318 PF00142 Fer4_NifH: 4Fe-4S iro 24.0 80 0.0017 31.4 3.4 27 100-126 8-36 (273)
319 KOG0780 Signal recognition par 24.0 6E+02 0.013 27.0 9.7 73 407-479 159-242 (483)
320 COG0299 PurN Folate-dependent 23.8 2.2E+02 0.0048 27.0 6.1 105 85-266 1-108 (200)
321 PF01081 Aldolase: KDPG and KH 23.8 5.3E+02 0.012 24.3 8.8 70 417-486 19-90 (196)
322 cd01080 NAD_bind_m-THF_DH_Cycl 23.8 4.8E+02 0.01 23.9 8.4 65 420-486 31-97 (168)
323 PRK06179 short chain dehydroge 23.7 1.1E+02 0.0025 29.5 4.5 25 100-127 13-37 (270)
324 KOG1192 UDP-glucuronosyl and U 23.4 1.1E+02 0.0023 32.8 4.7 29 101-129 16-44 (496)
325 PRK02122 glucosamine-6-phospha 23.3 1.7E+02 0.0036 33.1 6.2 40 84-129 369-408 (652)
326 PRK07454 short chain dehydroge 23.2 1.1E+02 0.0023 29.0 4.2 34 84-126 5-38 (241)
327 cd00027 BRCT Breast Cancer Sup 23.1 2.8E+02 0.0061 19.6 5.9 58 432-501 2-59 (72)
328 COG1004 Ugd Predicted UDP-gluc 23.1 83 0.0018 33.1 3.5 29 85-124 1-29 (414)
329 COG0569 TrkA K+ transport syst 23.1 61 0.0013 31.2 2.4 25 102-126 7-31 (225)
330 TIGR01769 GGGP geranylgeranylg 23.1 74 0.0016 30.3 2.9 71 411-486 5-79 (205)
331 TIGR00640 acid_CoA_mut_C methy 23.0 3.9E+02 0.0084 23.4 7.3 13 347-359 28-40 (132)
332 PRK03692 putative UDP-N-acetyl 22.9 4E+02 0.0086 26.1 8.1 64 386-459 121-185 (243)
333 PLN00198 anthocyanidin reducta 22.8 1.1E+02 0.0023 30.9 4.3 34 83-126 8-41 (338)
334 COG0240 GpsA Glycerol-3-phosph 22.8 1.1E+02 0.0024 31.3 4.3 33 84-127 1-33 (329)
335 PLN02657 3,8-divinyl protochlo 22.5 1.1E+02 0.0024 32.0 4.4 36 82-127 58-93 (390)
336 PRK06027 purU formyltetrahydro 22.4 2E+02 0.0044 28.8 6.1 37 83-128 88-126 (286)
337 PF02635 DrsE: DsrE/DsrF-like 22.3 1.7E+02 0.0036 24.2 4.8 40 85-127 1-43 (122)
338 PLN02208 glycosyltransferase f 22.3 1.3E+02 0.0029 32.2 5.0 39 83-127 3-41 (442)
339 PRK05920 aromatic acid decarbo 22.2 1.6E+02 0.0035 28.1 5.0 36 84-127 3-39 (204)
340 PRK09730 putative NAD(P)-bindi 22.2 99 0.0021 29.2 3.7 33 85-126 1-33 (247)
341 TIGR03010 sulf_tusC_dsrF sulfu 22.2 1.4E+02 0.0031 25.4 4.3 38 86-127 1-39 (116)
342 TIGR03012 sulf_tusD_dsrE sulfu 22.1 1.7E+02 0.0036 25.5 4.7 37 86-125 1-38 (127)
343 COG1692 Calcineurin-like phosp 22.1 4.1E+02 0.0088 26.2 7.6 82 404-486 2-91 (266)
344 PRK13555 azoreductase; Provisi 22.1 6.3E+02 0.014 23.9 9.1 38 85-124 2-42 (208)
345 PRK08655 prephenate dehydrogen 22.0 1.1E+02 0.0024 32.6 4.4 33 85-127 1-33 (437)
346 TIGR03172 probable selenium-de 22.0 1.2E+02 0.0026 29.5 4.2 28 101-128 8-35 (232)
347 PRK06015 keto-hydroxyglutarate 21.9 6.9E+02 0.015 23.7 9.7 71 416-486 14-86 (201)
348 PLN02896 cinnamyl-alcohol dehy 21.9 1.2E+02 0.0026 31.0 4.4 33 83-125 9-41 (353)
349 PRK06182 short chain dehydroge 21.9 1.3E+02 0.0028 29.2 4.5 25 100-127 12-36 (273)
350 PRK07538 hypothetical protein; 21.9 75 0.0016 33.3 3.0 30 85-125 1-30 (413)
351 PF01936 NYN: NYN domain; Int 21.9 2.4E+02 0.0052 24.2 5.9 66 412-481 74-143 (146)
352 TIGR03466 HpnA hopanoid-associ 21.8 1.1E+02 0.0023 30.5 4.0 33 85-127 1-33 (328)
353 PRK13396 3-deoxy-7-phosphohept 21.8 8.4E+02 0.018 25.3 10.5 98 401-502 99-210 (352)
354 PRK06719 precorrin-2 dehydroge 21.6 69 0.0015 29.0 2.3 35 83-128 12-46 (157)
355 PF13460 NAD_binding_10: NADH( 21.6 76 0.0016 28.6 2.6 28 101-128 5-32 (183)
356 PLN02562 UDP-glycosyltransfera 21.5 3.9E+02 0.0084 28.6 8.4 89 403-502 275-368 (448)
357 PRK06101 short chain dehydroge 21.4 1.3E+02 0.0028 28.6 4.4 24 100-126 10-33 (240)
358 PRK12826 3-ketoacyl-(acyl-carr 21.4 1.3E+02 0.0027 28.5 4.3 34 84-127 6-39 (251)
359 PRK06732 phosphopantothenate-- 21.3 95 0.0021 30.0 3.4 32 87-126 17-48 (229)
360 TIGR00670 asp_carb_tr aspartat 21.1 8.6E+02 0.019 24.5 10.9 86 390-486 141-226 (301)
361 PRK06924 short chain dehydroge 21.0 1.1E+02 0.0025 29.0 3.9 24 100-126 10-33 (251)
362 PLN02240 UDP-glucose 4-epimera 21.0 1.2E+02 0.0027 30.5 4.4 32 84-125 5-36 (352)
363 PLN02778 3,5-epimerase/4-reduc 21.0 1.2E+02 0.0026 30.3 4.2 31 84-124 9-39 (298)
364 TIGR03219 salicylate_mono sali 20.8 85 0.0018 32.9 3.2 29 85-124 1-30 (414)
365 TIGR02114 coaB_strep phosphopa 20.8 95 0.0021 29.9 3.2 31 87-125 16-46 (227)
366 COG2120 Uncharacterized protei 20.7 1.5E+02 0.0033 28.7 4.7 43 82-130 8-50 (237)
367 PRK05568 flavodoxin; Provision 20.6 2E+02 0.0043 24.9 5.0 27 99-125 11-37 (142)
368 TIGR03815 CpaE_hom_Actino heli 20.3 1.3E+02 0.0028 30.5 4.2 26 100-125 102-129 (322)
369 PF00070 Pyr_redox: Pyridine n 20.2 90 0.002 24.2 2.5 22 106-127 10-31 (80)
370 PF01494 FAD_binding_3: FAD bi 20.2 96 0.0021 30.9 3.3 30 85-125 2-31 (356)
371 PRK11064 wecC UDP-N-acetyl-D-m 20.2 1.2E+02 0.0025 32.2 4.0 32 84-126 3-34 (415)
372 COG0655 WrbA Multimeric flavod 20.1 1.8E+02 0.0039 27.3 5.0 40 85-127 1-40 (207)
373 cd01453 vWA_transcription_fact 20.1 6.8E+02 0.015 22.9 10.1 69 403-476 109-177 (183)
374 cd03129 GAT1_Peptidase_E_like 20.1 7.2E+02 0.016 23.2 10.2 70 414-483 12-87 (210)
375 PRK08105 flavodoxin; Provision 20.1 1.7E+02 0.0036 26.2 4.5 27 99-125 11-37 (149)
No 1
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=2.5e-61 Score=530.45 Aligned_cols=390 Identities=34% Similarity=0.580 Sum_probs=326.6
Q ss_pred cCCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCc-----eEEEEEeCCeeeEEEEEE
Q 010752 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTD-----VVIELKVGDKIEKVRFFH 156 (502)
Q Consensus 82 ~~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 156 (502)
+++|||+||++|+.|+.++||+++++++|+++|++.||+|.|++|.|+.....+... ......++......++++
T Consensus 479 ~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~ 558 (977)
T PLN02939 479 SSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWT 558 (977)
T ss_pred CCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEE
Confidence 568999999999999999999999999999999999999999999998765322111 112222333333467788
Q ss_pred EeecCceEEEEeC--C-cccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEE
Q 010752 157 CHKRGVDRVFVDH--P-WFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFV 233 (502)
Q Consensus 157 ~~~~gv~v~~i~~--p-~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih 233 (502)
...+||++||+++ | .|+.+ ..+|+ +.|+..||.+||+++++++..++ ++|| |||
T Consensus 559 ~~~~GV~vyfId~~~~~~fF~R------~~iYg------~~Dn~~RF~~FsrAaLe~~~~~~----------~~PD-IIH 615 (977)
T PLN02939 559 GTVEGLPVYFIEPQHPSKFFWR------AQYYG------EHDDFKRFSYFSRAALELLYQSG----------KKPD-IIH 615 (977)
T ss_pred EEECCeeEEEEecCCchhccCC------CCCCC------CccHHHHHHHHHHHHHHHHHhcC----------CCCC-EEE
Confidence 8889999999985 3 25554 46786 68999999999999999998764 3699 999
Q ss_pred EcCCccchHHHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHH
Q 010752 234 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAG 313 (502)
Q Consensus 234 ~h~~~t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 313 (502)
||||+|++++.+++..+...| +.++|+||||||..|||.|+...+..+++|.....+.+....+ ....+|++|.+
T Consensus 616 ~HDW~TaLV~pll~~~y~~~~-~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~----~~~~iN~LK~G 690 (977)
T PLN02939 616 CHDWQTAFVAPLYWDLYAPKG-FNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDN----AHGRINVVKGA 690 (977)
T ss_pred ECCccHHHHHHHHHHHHhhcc-CCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhc----cCCchHHHHHH
Confidence 999999998655555565555 4789999999999999999888877788887655433222111 12579999999
Q ss_pred HHhcCccccCCHHHHHHHHcCCCCCCcchhhhc--cccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHH
Q 010752 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 391 (502)
Q Consensus 314 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~--~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~ 391 (502)
+..||.|+|||+.+++++.. .+|..++.+++ ..++.+|+||||.+.|+|.+|++|+.+|+..++ .+|...|.+++
T Consensus 691 Iv~AD~VtTVSptYA~EI~t--e~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl-~GK~~nK~aLR 767 (977)
T PLN02939 691 IVYSNIVTTVSPTYAQEVRS--EGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDL-QGKAANKAALR 767 (977)
T ss_pred HHhCCeeEeeeHHHHHHHHH--HhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhh-hhhhhhhHHHH
Confidence 99999999999999999985 56776666655 368999999999999999999999999999997 69999999999
Q ss_pred HHhCCCCC-CCCcEEEEEcCcccccCHHHHHHHHhhcccCCeEEEEEeCCC-hhhHHHHHHHHHHCC--CceEEEeecCh
Q 010752 392 AEVGLPVD-RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEILYP--EKARGVAKFNI 467 (502)
Q Consensus 392 ~~~gl~~~-~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~-~~~~~~l~~l~~~~~--~~v~~~~~~~~ 467 (502)
+++|++.+ ++.|+|+|+||+.++||++.+++|+.++.+.+++|+|+|+|+ +.+++.++++..+++ ++|.+.+.++.
T Consensus 768 kelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~~de 847 (977)
T PLN02939 768 KQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDE 847 (977)
T ss_pred HHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhhcCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccCH
Confidence 99999853 678999999999999999999999999877789999999996 456778888888875 57999999998
Q ss_pred HHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 468 ~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
...+.+|++||+||+||++||||++++|||+||+|
T Consensus 848 ~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyGtP 882 (977)
T PLN02939 848 ALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSV 882 (977)
T ss_pred HHHHHHHHhCCEEEECCCccCCcHHHHHHHHCCCC
Confidence 88899999999999999999999999999999987
No 2
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=7.5e-60 Score=505.37 Aligned_cols=393 Identities=29% Similarity=0.588 Sum_probs=327.9
Q ss_pred CCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccc-cCC-c--eEEE--EEeCCeeeEEEEEE
Q 010752 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDA-WDT-D--VVIE--LKVGDKIEKVRFFH 156 (502)
Q Consensus 83 ~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~-~~~-~--~~~~--~~~~~~~~~~~~~~ 156 (502)
++|||+||++|+.|+.|+||++++++.|+++|+++||+|.|+.|.|+...+. ++. . ...+ +.++......+..+
T Consensus 4 ~~~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (489)
T PRK14098 4 RNFKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKEKTDLLHVKV 83 (489)
T ss_pred CCcEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCchhhhhhccccceEEEEEEEeecCeeEEEEEEE
Confidence 3599999999999999999999999999999999999999999999987653 211 1 1222 22332222222222
Q ss_pred Eee--cCceEEEEeCCcccccccCCCCCcccCCC-CCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEE
Q 010752 157 CHK--RGVDRVFVDHPWFLAKVWGKTQSKIYGPR-TGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFV 233 (502)
Q Consensus 157 ~~~--~gv~v~~i~~p~~~~~~~~~~~~~~y~~~-~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih 233 (502)
... .||++||+++|.|+.| ..+|+.. +|.||.||..||.+||++++++++.+. ++|| |||
T Consensus 84 ~~~~~~~v~~~~~~~~~~f~r------~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~----------~~pD-iiH 146 (489)
T PRK14098 84 TALPSSKIQTYFLYNEKYFKR------NGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLG----------WKPD-IIH 146 (489)
T ss_pred ecccCCCceEEEEeCHHHcCC------CCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcC----------CCCC-EEE
Confidence 223 3799999999999887 4689875 678999999999999999999987754 4699 999
Q ss_pred EcCCccchHHHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHH
Q 010752 234 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAG 313 (502)
Q Consensus 234 ~h~~~t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 313 (502)
+|||+++++|.+++..+.....+.++|+|+|+||..+||.++...+..+ +|..+...+ .. ....++++|.+
T Consensus 147 ~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~-~~~~~~~~~---~~-----~~~~~n~lk~~ 217 (489)
T PRK14098 147 CHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKL-LPEEVCSGL---HR-----EGDEVNMLYTG 217 (489)
T ss_pred ecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHh-CCHHhhhhh---hh-----cCCcccHHHHH
Confidence 9999999999999987766666679999999999999998876554433 444432111 10 11467999999
Q ss_pred HHhcCccccCCHHHHHHHHcCCCCCCcchhhhc--cccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHH
Q 010752 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 391 (502)
Q Consensus 314 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~--~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~ 391 (502)
+..||.|+|||+.+++++.+...+|..++.+++ ..++.+|+||+|.+.|+|.+++++..+|+..++ .+|...|.+++
T Consensus 218 i~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~-~~k~~~k~~l~ 296 (489)
T PRK14098 218 VEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERL-DGKLENKKALL 296 (489)
T ss_pred HHhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchh-hhHHHHHHHHH
Confidence 999999999999999999852244555555554 358999999999999999999999999999876 68899999999
Q ss_pred HHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHH
Q 010752 392 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAH 471 (502)
Q Consensus 392 ~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~ 471 (502)
+++|++.+++.|+|+++||+.++||++.+++|++++.+++++|+|+|+|++.+++.++++.+++++++.+.+.++.++++
T Consensus 297 ~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~ 376 (489)
T PRK14098 297 EEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFH 376 (489)
T ss_pred HHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecCHHHHH
Confidence 99999988899999999999999999999999999987899999999998777889999999998899999999999999
Q ss_pred HHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 472 MIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 472 ~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
.+|++||++++||++|+||++++|||+||+|
T Consensus 377 ~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~p 407 (489)
T PRK14098 377 LAIAGLDMLLMPGKIESCGMLQMFAMSYGTI 407 (489)
T ss_pred HHHHhCCEEEeCCCCCCchHHHHHHHhCCCC
Confidence 9999999999999999999999999999986
No 3
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=3.4e-59 Score=499.79 Aligned_cols=391 Identities=38% Similarity=0.613 Sum_probs=322.8
Q ss_pred CCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCc-eEEEEEeCCeeeEEEEEEEeecC
Q 010752 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTD-VVIELKVGDKIEKVRFFHCHKRG 161 (502)
Q Consensus 83 ~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g 161 (502)
++|||+||++|+.|++++||++++++.|+++|+++||+|.|+.|.|+...+..... ...++.+... ..+++++...+|
T Consensus 2 ~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 80 (485)
T PRK14099 2 TPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVLAGIEDAEQVHSFPDLFG-GPARLLAARAGG 80 (485)
T ss_pred CCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCCcchhhhhcCceEEEEEeeeCC-ceEEEEEEEeCC
Confidence 56999999999999999999999999999999999999999999999875443222 1222221111 146677888899
Q ss_pred ceEEEEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccch
Q 010752 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSL 241 (502)
Q Consensus 162 v~v~~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~ 241 (502)
|++||+++|.|+.| ...+|+...|.+|.||..||.+||++++++++.+.. .++|| |||+|||++++
T Consensus 81 v~~~~~~~~~~f~r-----~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~--------~~~pD-IiH~Hdw~~~l 146 (485)
T PRK14099 81 LDLFVLDAPHLYDR-----PGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVP--------GFVPD-IVHAHDWQAGL 146 (485)
T ss_pred ceEEEEeChHhhCC-----CCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhcc--------CCCCC-EEEECCcHHHH
Confidence 99999999999876 234898877889999999999999999998876421 24799 99999999999
Q ss_pred HHHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccc
Q 010752 242 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 321 (502)
Q Consensus 242 ~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi 321 (502)
++.+++... ..++|+|+|+||..+||.|+...+..++++...... +....+ ..+++++.++..||.|+
T Consensus 147 ~~~~l~~~~-----~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~k~~i~~ad~vi 214 (485)
T PRK14099 147 APAYLHYSG-----RPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSL-DGVEYY------GGIGYLKAGLQLADRIT 214 (485)
T ss_pred HHHHHHhCC-----CCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCc-hhhhhC------CCccHHHHHHHhcCeee
Confidence 999887421 146899999999999999887777777776654321 111111 45688999999999999
Q ss_pred cCCHHHHHHHHcCCCCCCcchhhhc--cccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCC
Q 010752 322 TVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 399 (502)
Q Consensus 322 ~vS~~~~~~l~~~~~~g~~~~~~~~--~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~ 399 (502)
|||+.+++++.+ ..+|..++.+++ ..++.+|+||+|.+.|+|.++++++.+|+..++ .+|...|+++++++|++.+
T Consensus 215 tVS~~~a~ei~~-~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~~~ 292 (485)
T PRK14099 215 TVSPTYALEIQG-PEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETL-AARAANKAALQARFGLDPD 292 (485)
T ss_pred ecChhHHHHHhc-ccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHH-HhHHHhHHHHHHHcCCCcc
Confidence 999999999985 345555554443 358999999999999999999999999999886 6888899999999999877
Q ss_pred CCCcEEEEEcCcccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCE
Q 010752 400 RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (502)
Q Consensus 400 ~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi 479 (502)
++.++|+++||+.++||++.+++|++++.+++++|+++|+|++++++.++++.+++++++.....+.++..+.++++||+
T Consensus 293 ~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~~~~l~~~~~a~aDi 372 (485)
T PRK14099 293 PDALLLGVISRLSWQKGLDLLLEALPTLLGEGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGYDEALAHLIQAGADA 372 (485)
T ss_pred cCCcEEEEEecCCccccHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHhcCCE
Confidence 78899999999999999999999999998778999999999877888999999888877755556666666656688999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCC
Q 010752 480 ILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 480 ~l~PS~~E~fglv~lEAma~G~P 502 (502)
+|+||++||||++++|||+||+|
T Consensus 373 fv~PS~~E~fGl~~lEAma~G~p 395 (485)
T PRK14099 373 LLVPSRFEPCGLTQLCALRYGAV 395 (485)
T ss_pred EEECCccCCCcHHHHHHHHCCCC
Confidence 99999999999999999999975
No 4
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=3.4e-55 Score=469.24 Aligned_cols=385 Identities=45% Similarity=0.802 Sum_probs=326.4
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCc----eEEEEEeCCeeeEEEEEEEeec
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTD----VVIELKVGDKIEKVRFFHCHKR 160 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 160 (502)
|||+||++|++|+.++||+++++++|+++|+++||+|+|++|.|+...+.+... ....+.+++....+++++...+
T Consensus 1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
T TIGR02095 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLYVKVFEGVVE 80 (473)
T ss_pred CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChhhhhccCeEEEEEEEEeecCceeEEEEEEEEEC
Confidence 899999999999999999999999999999999999999999999876654322 2344556666777888888899
Q ss_pred CceEEEEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccc
Q 010752 161 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS 240 (502)
Q Consensus 161 gv~v~~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~ 240 (502)
||++|+++++.++.+ ...+|++ ||.|+..||.+|+++++++++.+. ++|| |||+|||+++
T Consensus 81 ~v~~~~i~~~~~~~r-----~~~~y~~----~~~d~~~r~~~f~~a~~~~~~~~~----------~~~D-iiH~hdw~~~ 140 (473)
T TIGR02095 81 GVPVYFIDNPSLFDR-----PGGIYGD----DYPDNAERFAFFSRAAAELLSGLG----------WQPD-VVHAHDWHTA 140 (473)
T ss_pred CceEEEEECHHHcCC-----CCCCCCC----CCCCHHHHHHHHHHHHHHHHHhcC----------CCCC-EEEECCcHHH
Confidence 999999999887664 1247764 689999999999999999987754 3699 9999999999
Q ss_pred hHHHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCcc
Q 010752 241 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 320 (502)
Q Consensus 241 ~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 320 (502)
+++.+++..+... ++|+|+|+|+..+||.++...+..++++..+.... ..+.+ ..+++++.++..||.|
T Consensus 141 ~~~~~l~~~~~~~----~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~k~~~~~ad~v 209 (473)
T TIGR02095 141 LVPALLKAVYRPN----PIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHME-GLEFY------GRVNFLKGGIVYADRV 209 (473)
T ss_pred HHHHHHHhhccCC----CCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCch-hhhcC------CchHHHHHHHHhCCcC
Confidence 9999999765211 48999999999999988876666666665433211 11111 3689999999999999
Q ss_pred ccCCHHHHHHHHcCCCCCCcchhhhc--cccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCC
Q 010752 321 LTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 398 (502)
Q Consensus 321 i~vS~~~~~~l~~~~~~g~~~~~~~~--~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~ 398 (502)
++||+.+++++.. ..+|..++.+++ ..++.+|+||+|.+.|+|..++++..+|+..++ ..|...|+++++++|++.
T Consensus 210 ~tVS~~~~~ei~~-~~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~~ 287 (473)
T TIGR02095 210 TTVSPTYAREILT-PEFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDL-AGKAENKEALQEELGLPV 287 (473)
T ss_pred eecCHhHHHHhcC-CcCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccch-hhhhhhHHHHHHHcCCCc
Confidence 9999999999985 345555544333 458999999999999999999999999998765 577788999999999987
Q ss_pred CCCCcEEEEEcCcccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcC
Q 010752 399 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 478 (502)
Q Consensus 399 ~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~AD 478 (502)
+++.|+|+|+||+.++||++.+++|++++.+.+++|+|+|+|++.++++++++..+++.++.+.+.++.++++.++++||
T Consensus 288 ~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD 367 (473)
T TIGR02095 288 DDDVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGAD 367 (473)
T ss_pred cCCCCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhCC
Confidence 77899999999999999999999999999877899999999987788899999988888899999999998999999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 479 FILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 479 i~l~PS~~E~fglv~lEAma~G~P 502 (502)
++++||.+|+||++++|||+||+|
T Consensus 368 v~l~pS~~E~~gl~~lEAma~G~p 391 (473)
T TIGR02095 368 FILMPSRFEPCGLTQLYAMRYGTV 391 (473)
T ss_pred EEEeCCCcCCcHHHHHHHHHCCCC
Confidence 999999999999999999999997
No 5
>PLN02316 synthase/transferase
Probab=100.00 E-value=1.4e-54 Score=485.27 Aligned_cols=360 Identities=32% Similarity=0.571 Sum_probs=299.0
Q ss_pred eeeeccCCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEE
Q 010752 77 LMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFH 156 (502)
Q Consensus 77 ~~~~~~~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (502)
+++...++|||+||++|++|+.++||+++++++|+++|+++||+|.|++|.|+.....+.........+......+++++
T Consensus 580 g~~~~~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~ 659 (1036)
T PLN02316 580 GGIAKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWF 659 (1036)
T ss_pred CCCCCCCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCcccchhhcccceEEEEeccCCEEEEEEE
Confidence 44555677999999999999999999999999999999999999999999998654322112121122222233567778
Q ss_pred EeecCceEEEEeCCc-ccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEc
Q 010752 157 CHKRGVDRVFVDHPW-FLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAN 235 (502)
Q Consensus 157 ~~~~gv~v~~i~~p~-~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h 235 (502)
...+||++||++++. ++.+ ..+|+ |.|+..||.+||++++++++.+. ++|| |||||
T Consensus 660 ~~~~GV~vyfl~~~~~~F~r------~~~Yg------~~Dd~~RF~~F~~Aale~l~~~~----------~~PD-IIHaH 716 (1036)
T PLN02316 660 GKVEGLSVYFLEPQNGMFWA------GCVYG------CRNDGERFGFFCHAALEFLLQSG----------FHPD-IIHCH 716 (1036)
T ss_pred EEECCcEEEEEeccccccCC------CCCCC------chhHHHHHHHHHHHHHHHHHhcC----------CCCC-EEEEC
Confidence 888999999999763 5543 34675 78999999999999999988764 3699 99999
Q ss_pred CCccchHHHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHH
Q 010752 236 DWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGIL 315 (502)
Q Consensus 236 ~~~t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 315 (502)
||++++++.+++..+...+ +.++|+|+|+|+..++. ++++.++.
T Consensus 717 DW~talva~llk~~~~~~~-~~~~p~V~TiHnl~~~~-----------------------------------n~lk~~l~ 760 (1036)
T PLN02316 717 DWSSAPVAWLFKDHYAHYG-LSKARVVFTIHNLEFGA-----------------------------------NHIGKAMA 760 (1036)
T ss_pred CChHHHHHHHHHHhhhhhc-cCCCCEEEEeCCcccch-----------------------------------hHHHHHHH
Confidence 9999999999998765554 36799999999876521 34567788
Q ss_pred hcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhC
Q 010752 316 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 395 (502)
Q Consensus 316 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~g 395 (502)
.||.|+|||+.+++++.. ...+.. +..++.+|+||||++.|+|.++++++.+|+..++..+|...++++++++|
T Consensus 761 ~AD~ViTVS~tya~EI~~--~~~l~~----~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lG 834 (1036)
T PLN02316 761 YADKATTVSPTYSREVSG--NSAIAP----HLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLG 834 (1036)
T ss_pred HCCEEEeCCHHHHHHHHh--ccCccc----ccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhC
Confidence 999999999999999985 122211 12489999999999999999999999999999888899999999999999
Q ss_pred CCCCCCCcEEEEEcCcccccCHHHHHHHHhhcccCCeEEEEEeCCC-hhhHHHHHHHHHHC----CCceEEEeecChHHH
Q 010752 396 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEILY----PEKARGVAKFNIPLA 470 (502)
Q Consensus 396 l~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~-~~~~~~l~~l~~~~----~~~v~~~~~~~~~~~ 470 (502)
++ +++.|+|+|+|||.++||++.|++|++++.+.+++|+|+|+|+ +.+++.+++++.++ ++++.+.+.+++.+.
T Consensus 835 L~-~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~la 913 (1036)
T PLN02316 835 LK-QADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLS 913 (1036)
T ss_pred CC-cccCeEEEEEeccccccCHHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHH
Confidence 97 3578999999999999999999999999887899999999985 34567788888854 567888888988888
Q ss_pred HHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 471 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 471 ~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
+.+|++||++|+||++||||+++||||+||+|
T Consensus 914 h~iyaaADiflmPS~~EP~GLvqLEAMa~Gtp 945 (1036)
T PLN02316 914 HLIYAGADFILVPSIFEPCGLTQLTAMRYGSI 945 (1036)
T ss_pred HHHHHhCcEEEeCCcccCccHHHHHHHHcCCC
Confidence 89999999999999999999999999999986
No 6
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=1.6e-54 Score=463.01 Aligned_cols=377 Identities=42% Similarity=0.705 Sum_probs=310.0
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccC-CceEEEEEeCCeeeEEEEEE--EeecC
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWD-TDVVIELKVGDKIEKVRFFH--CHKRG 161 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~g 161 (502)
|||+||++|++|+.++||+++++++|+++|+++||+|+|++|.|+...+... ......+ +..+++. ...+|
T Consensus 1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g 74 (466)
T PRK00654 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRL------DLFTVLFGHLEGDG 74 (466)
T ss_pred CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcchhhhhcCceEEEEe------eeEEEEEEeEEcCC
Confidence 8999999999999999999999999999999999999999999987654321 1111111 1133333 35689
Q ss_pred ceEEEEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccch
Q 010752 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSL 241 (502)
Q Consensus 162 v~v~~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~ 241 (502)
|++|+++++.++.+ ..+|+ |.|+..||.+||++++++++.++. +|| |||+|+|++++
T Consensus 75 v~v~~v~~~~~~~~------~~~y~------~~d~~~r~~~f~~~~~~~~~~~~~----------~pD-iiH~h~w~~~~ 131 (466)
T PRK00654 75 VPVYLIDAPHLFDR------PSGYG------YPDNGERFAFFSWAAAEFAEGLDP----------RPD-IVHAHDWHTGL 131 (466)
T ss_pred ceEEEEeCHHHcCC------CCCCC------CcChHHHHHHHHHHHHHHHHhcCC----------CCc-eEEECCcHHHH
Confidence 99999999888765 35776 788999999999999999887643 699 99999999999
Q ss_pred HHHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccc
Q 010752 242 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 321 (502)
Q Consensus 242 ~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi 321 (502)
++.+++..+ ..+ +.++|+|+|+|+..+||.++...+..++++...... +.... ...+++++.++..||.|+
T Consensus 132 ~~~~l~~~~-~~~-~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~ad~vi 202 (466)
T PRK00654 132 IPALLKEKY-WRG-YPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHL-EGLEF------YGQISFLKAGLYYADRVT 202 (466)
T ss_pred HHHHHHHhh-hcc-CCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCc-hhhhc------CCcccHHHHHHHhcCcCe
Confidence 999999765 222 357999999999999998877666666776554321 00111 134688999999999999
Q ss_pred cCCHHHHHHHHcCCCCCCcchhhh--ccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCC
Q 010752 322 TVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 399 (502)
Q Consensus 322 ~vS~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~ 399 (502)
+||+.+++++.. ..+|..++..+ +..++.+|+||+|.+.|+|.++++++.+|+..++ ++|.+.|+++++++|++ +
T Consensus 203 tvS~~~~~ei~~-~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~-~ 279 (466)
T PRK00654 203 TVSPTYAREITT-PEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDL-EGKAENKRALQERFGLP-D 279 (466)
T ss_pred eeCHHHHHHhcc-ccCCcChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhh-hchHHHHHHHHHHhCCC-C
Confidence 999999999874 33443333222 2358999999999999999999999999998775 58888999999999997 4
Q ss_pred CCCcEEEEEcCcccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCE
Q 010752 400 RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (502)
Q Consensus 400 ~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi 479 (502)
++.|+|+|+||+.++||++.+++|++++.+++++|+|+|+|++.+++.++++++++++++.+...++.+.++.+|++||+
T Consensus 280 ~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~~~~aDv 359 (466)
T PRK00654 280 DDAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGADM 359 (466)
T ss_pred CCCcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHhhCCE
Confidence 57889999999999999999999999998779999999999877788999999999887877777887888899999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCC
Q 010752 480 ILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 480 ~l~PS~~E~fglv~lEAma~G~P 502 (502)
+|+||++|+||++++|||+||+|
T Consensus 360 ~v~PS~~E~~gl~~lEAma~G~p 382 (466)
T PRK00654 360 FLMPSRFEPCGLTQLYALRYGTL 382 (466)
T ss_pred EEeCCCCCCchHHHHHHHHCCCC
Confidence 99999999999999999999997
No 7
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-53 Score=447.79 Aligned_cols=387 Identities=40% Similarity=0.652 Sum_probs=332.9
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCc----eEEEEEeCCeeeEEEEEEEee-
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTD----VVIELKVGDKIEKVRFFHCHK- 159 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~- 159 (502)
|||++++.|+.|+.++||++++++.|+++|+++||+|.|+.|.|+...+.|... ....+..+.........+..+
T Consensus 1 M~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g~~v~v~lP~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (487)
T COG0297 1 MKILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQKEWRDLLKVVGKFGVLKGGRAQLFIVKEYGKD 80 (487)
T ss_pred CcceeeeeeecCccccCcHHHHHHHhHHHHHhcCCeEEEEcCCchhhhhhhccccceeeEeeeeecccceEEEEEeeccc
Confidence 899999999999999999999999999999999999999999999777766553 122323333333333333333
Q ss_pred cCceEEEEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCcc
Q 010752 160 RGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT 239 (502)
Q Consensus 160 ~gv~v~~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t 239 (502)
.|++.+++|.|.+++|- .+..| +|.|+..||.+|++++++....... . +.|| |||+||||+
T Consensus 81 ~~v~~~lid~~~~f~r~----~~~~~------~~~d~~~Rf~~F~~a~~~~~~~~~~-------~-~~pD-IvH~hDWqt 141 (487)
T COG0297 81 GGVDLYLIDNPALFKRP----DSTLY------GYYDNAERFAFFSLAAAELAPLGLI-------S-WLPD-IVHAHDWQT 141 (487)
T ss_pred CCCcEEEecChhhcCcc----ccccC------CCCcHHHHHHHHHHHHHHHhhhcCC-------C-CCCC-EEEeecHHH
Confidence 34999999988887751 12333 4899999999999999998865431 0 3699 999999999
Q ss_pred chHHHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCc
Q 010752 240 SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDM 319 (502)
Q Consensus 240 ~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ 319 (502)
++++.+++..+. .+..+|.|||+||..|||.|+...+..++||..++. ......+ ..+++||.++..||.
T Consensus 142 ~L~~~~lk~~~~---~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~-~~~l~~~------~~~~~lK~gi~~ad~ 211 (487)
T COG0297 142 GLLPAYLKQRYR---SGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYA-SFGLEFY------GQISFLKGGLYYADA 211 (487)
T ss_pred HHHHHHHhhccc---ccccCCeEEEEeeceeecccchhhHHHhcCCHHHhh-hceeeec------CcchhhhhhheeccE
Confidence 999999998641 126899999999999999999777799999988766 3233333 357999999999999
Q ss_pred cccCCHHHHHHHHcCCCCCCcchhhhcc--ccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCC
Q 010752 320 VLTVSPHYAQELVSGEDKGVELDNIIRK--TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP 397 (502)
Q Consensus 320 vi~vS~~~~~~l~~~~~~g~~~~~~~~~--~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~ 397 (502)
|.+||+.+++++. .+++|..++..++. .++.+|.||+|.+.|+|.+|+++..+|+..+.. +|.++|.+|+.++|++
T Consensus 212 vttVSptYa~Ei~-t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~-~k~~nk~~L~~~~gL~ 289 (487)
T COG0297 212 VTTVSPTYAGEIY-TPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLP-AKAENKVALQERLGLD 289 (487)
T ss_pred EEEECHHHHHhhc-cccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchh-hhHHHHHHHHHHhCCC
Confidence 9999999999999 47898888877764 578999999999999999999999999998875 6999999999999999
Q ss_pred CCCCCcEEEEEcCcccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhc
Q 010752 398 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 477 (502)
Q Consensus 398 ~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~A 477 (502)
.+.+.|+++++||+..|||+|.+++++..+.+..++++++|+|++.+++.+..+++++++++.....++.+..+.++++|
T Consensus 290 ~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~~~la~~i~aga 369 (487)
T COG0297 290 VDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAGA 369 (487)
T ss_pred CCCCCcEEEEeeccccccchhHHHHHHHHHHHhCceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeecHHHHHHHHhcC
Confidence 98999999999999999999999999999999889999999998889999999999999989999999999999999999
Q ss_pred CEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 478 DFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 478 Di~l~PS~~E~fglv~lEAma~G~P 502 (502)
|++++||+|||||+++++||++||+
T Consensus 370 D~~lmPSrfEPcGL~ql~amryGtv 394 (487)
T COG0297 370 DVILMPSRFEPCGLTQLYAMRYGTL 394 (487)
T ss_pred CEEEeCCcCcCCcHHHHHHHHcCCc
Confidence 9999999999999999999999985
No 8
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=1.3e-51 Score=441.53 Aligned_cols=390 Identities=44% Similarity=0.769 Sum_probs=322.4
Q ss_pred eEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceE----EEEEeCCeeeEEEEEEEeecC
Q 010752 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVV----IELKVGDKIEKVRFFHCHKRG 161 (502)
Q Consensus 86 kIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g 161 (502)
||+||++|++|+.++||+++++.+|+++|+++||+|+|++|.|+...+.+..... ..+........++.++...+|
T Consensus 1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 80 (476)
T cd03791 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPEYVGVFELPVDG 80 (476)
T ss_pred CEEEEEccccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhhHhccCeEEEEEEeeccCCceeEEEEEEEEeCC
Confidence 6999999999999999999999999999999999999999999987765544322 223455566677888888899
Q ss_pred ceEEEEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccch
Q 010752 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSL 241 (502)
Q Consensus 162 v~v~~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~ 241 (502)
|+++++++|.+..+ ..+| +..+.+|.++..+|.+|+++++++++.+. ++|| |||+|||++++
T Consensus 81 v~~~~l~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~f~~~~~~~l~~~~----------~~pD-viH~hd~~t~~ 142 (476)
T cd03791 81 VPVYFLDNPDYFDR------PGLY-DDSGYDYEDNAERFALFSRAALELLRRLG----------WKPD-IIHCHDWHTGL 142 (476)
T ss_pred ceEEEEcChHHcCC------CCCC-CccCCCCccHHHHHHHHHHHHHHHHHhcC----------CCCc-EEEECchHHHH
Confidence 99999999987765 2333 33455689999999999999999988763 2699 99999999999
Q ss_pred HHHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccc
Q 010752 242 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 321 (502)
Q Consensus 242 ~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi 321 (502)
++.+++..++. ..+.++|+|+|+|+..++|.++...+....++...... ... ......+++++.++..||.|+
T Consensus 143 ~~~~l~~~~~~-~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~ad~v~ 215 (476)
T cd03791 143 VPALLKEKYAD-PFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFH---IDG---LEFYGQVNFLKAGIVYADAVT 215 (476)
T ss_pred HHHHHHHhhcc-ccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhh---hcc---cccCCcccHHHHHHHhcCcCe
Confidence 99999987654 34568999999999999987776554444333210000 011 112245688899999999999
Q ss_pred cCCHHHHHHHHcCCCCCCcchhhhc--cccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCC
Q 010752 322 TVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 399 (502)
Q Consensus 322 ~vS~~~~~~l~~~~~~g~~~~~~~~--~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~ 399 (502)
+||+.+++++.+ ..+|..++.++. ..++.+|+||+|.+.|.|..++++..+|+... ...|...|+++++++|++.+
T Consensus 216 ~vS~~~~~~i~~-~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~-~~~~~~~k~~l~~~~g~~~~ 293 (476)
T cd03791 216 TVSPTYAREILT-PEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADD-LEGKAENKAALQEELGLPVD 293 (476)
T ss_pred ecCHhHHHHhCC-CCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccc-cccHHHHHHHHHHHcCCCcC
Confidence 999999999885 344555544443 35899999999999999999988988888543 47889999999999999877
Q ss_pred CCCcEEEEEcCcccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCE
Q 010752 400 RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (502)
Q Consensus 400 ~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi 479 (502)
++.++|+|+||+.++||++.+++|++++.+.+++|+++|+|.+.+++.++++..++++++.+...++.++++.++++||+
T Consensus 294 ~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv 373 (476)
T cd03791 294 PDAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGADF 373 (476)
T ss_pred CCCCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhCCE
Confidence 89999999999999999999999999998878999999999877788899998888888998899998888999999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCC
Q 010752 480 ILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 480 ~l~PS~~E~fglv~lEAma~G~P 502 (502)
+++||.+|+||++++|||+||+|
T Consensus 374 ~l~pS~~E~~gl~~lEAma~G~p 396 (476)
T cd03791 374 FLMPSRFEPCGLTQMYAMRYGTV 396 (476)
T ss_pred EECCCCCCCCcHHHHHHhhCCCC
Confidence 99999999999999999999998
No 9
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=100.00 E-value=2.1e-36 Score=328.06 Aligned_cols=393 Identities=18% Similarity=0.224 Sum_probs=302.7
Q ss_pred EEEEeeecc-----CccccccHHHHHhhhHHHHHHCCCeEEEEEecCCC------C---------ccccCC---------
Q 010752 87 ILFVGTEVA-----PWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ------Y---------KDAWDT--------- 137 (502)
Q Consensus 87 Il~V~~~~~-----P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~------~---------~~~~~~--------- 137 (502)
|++++.||. | ...||+|...+....+++..|...+.++-.|.+ . .+.|+.
T Consensus 1 ~ayf~~E~g~~~~~p-~ysGGLG~LAgd~l~saa~l~~p~~g~gl~Y~~Gyf~Q~i~~~g~Q~e~~~~~~~~~~p~~~~~ 79 (601)
T TIGR02094 1 VAYFSMEYGLHESLP-IYSGGLGVLAGDHLKSASDLGLPLVAVGLLYKQGYFRQRLDEDGWQQEAYPNNDFESLPIEKVL 79 (601)
T ss_pred CeEEeeccccCCCCC-ccCchHHHHHHHHHHHHHhCCCCeEEEEeccCCCceeEEECCCCceeecCCccccCCCceEEEe
Confidence 567777776 4 378999999999999999999999999876652 1 122321
Q ss_pred -----ceEEEEEeCCeeeEEEEEEEeecCceEEEEeCCcccccccCCCCC-cccCCCCCCCCcchHHHHHHHHHHHHHhh
Q 010752 138 -----DVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQS-KIYGPRTGEDYQDNQLRFSLLCQAALEAP 211 (502)
Q Consensus 138 -----~~~~~~~~~~~~~~~~~~~~~~~gv~v~~i~~p~~~~~~~~~~~~-~~y~~~~g~~~~~~~~r~~~~~~a~~~~~ 211 (502)
....++++..+...++.++...+++++++++++..-.+.+.+..+ .+|++ |..+...++.+|+.+.++.+
T Consensus 80 ~~~g~~~~~~v~i~g~~~~~rlw~~~~~~v~lylld~~~~~n~~~~R~it~~LY~~----D~~~R~~Qe~fl~~a~l~~l 155 (601)
T TIGR02094 80 DTDGKWLKISVRIRGRDVYAKVWRVQVGRVPLYLLDTNIPENSEDDRWITGRLYGG----DKEMRIAQEIVLGIGGVRAL 155 (601)
T ss_pred cCCCCeEEEEEecCCcEEEEEEEEEEeCCCCEEEecCCCcccchhhcCccCCCCCC----CHHHHHHHHHHHHHHHHHHH
Confidence 124667777777888889888889999999988622222333322 46862 23344444499999999999
Q ss_pred hhhcccCCCCCCCCCCCCEEEEEcCCccchHHHHHHHhccCCCC-----c--CCCeEEEEEecCccccc--cccccc---
Q 010752 212 RILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGM-----Y--KSAKVVFCIHNIAYQGR--FAFEDF--- 279 (502)
Q Consensus 212 ~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~~~lk~~~~~~~~-----~--~~~pvv~tiH~~~~~g~--~~~~~~--- 279 (502)
+.++. +|| |||+||||++++++.+.+.....+. + .+.+++||+|+..+||. |+...+
T Consensus 156 ~~l~~----------~pd-viH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~ 224 (601)
T TIGR02094 156 RALGI----------DPD-VYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKY 224 (601)
T ss_pred HHcCC----------Cce-EEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHH
Confidence 87753 699 9999999999999987543211221 1 15789999999999997 887666
Q ss_pred -----cccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccccCCHHHHHHHHcCCCCCCcchhhhc--cccEEE
Q 010752 280 -----GLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKG 352 (502)
Q Consensus 280 -----~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~--~~~i~v 352 (502)
..++++.+......... +. ....+++++.++..||.|.+||+.+++...+ .++ .+...++ ..++..
T Consensus 225 ~~~~~~~~gl~~~~~~~~~~~~-~~---~~~~vnm~~lai~~S~~vngVS~lh~~v~~~--l~~-~l~~~~~~~~~~i~g 297 (601)
T TIGR02094 225 FGDYAANLGLPREQLLALGREN-PD---DPEPFNMTVLALRLSRIANGVSKLHGEVSRK--MWQ-FLYPGYEEEEVPIGY 297 (601)
T ss_pred hhhhhhHhCCCHHHHHhhhhhc-cC---ccCceeHHHHHHHhCCeeeeecHHHHHHHHH--HHH-hhhhhcccccCCccc
Confidence 33566665433221111 00 0135799999999999999999999983321 000 0111111 236899
Q ss_pred eeCCCcCCCCCCCcccccccccCcch---------------------hccchHHHHHHHHH-------------------
Q 010752 353 IVNGMDVQEWNPLTDKYIGVKYDAST---------------------VMDAKPLLKEALQA------------------- 392 (502)
Q Consensus 353 I~NGvd~~~~~p~~~~~i~~~~~~~~---------------------~~~~k~~~k~~l~~------------------- 392 (502)
|.||||...|.|.+++.|..+|+..+ +..+|..+|++|++
T Consensus 298 ItNGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~ 377 (601)
T TIGR02094 298 VTNGVHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAI 377 (601)
T ss_pred eeCCccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchh
Confidence 99999999999999999999999877 34799999999998
Q ss_pred --HhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc------CCeEEEEEeCCChh------hHHHHHHHHHH--CC
Q 010752 393 --EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGKKP------MEKQLEQLEIL--YP 456 (502)
Q Consensus 393 --~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~------~~v~lvivG~g~~~------~~~~l~~l~~~--~~ 456 (502)
++|++.+++.|+|+|++|+.++||++++++++.++.+ .++|||++|++.+. +++.+.+++++ ++
T Consensus 378 ~~~~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~ 457 (601)
T TIGR02094 378 LMATDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFR 457 (601)
T ss_pred hhhhccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCC
Confidence 5888899999999999999999999999999988863 47999999999865 88889999888 88
Q ss_pred CceEEEeecChHHHHHHHHhcCEEEE-cCC-CCCCcHHHHHHHHcCCC
Q 010752 457 EKARGVAKFNIPLAHMIIAGADFILI-PSR-FEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 457 ~~v~~~~~~~~~~~~~ila~ADi~l~-PS~-~E~fglv~lEAma~G~P 502 (502)
+++.++..|+.+.++.++++||++++ ||+ +|+||++++-||.+|.+
T Consensus 458 ~kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL 505 (601)
T TIGR02094 458 GRIVFLENYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVL 505 (601)
T ss_pred CCEEEEcCCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCc
Confidence 89999999999999999999999999 999 99999999999999964
No 10
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=100.00 E-value=3.1e-35 Score=288.19 Aligned_cols=235 Identities=40% Similarity=0.683 Sum_probs=177.0
Q ss_pred eEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccC-CceEE--------EEEeCCeeeEEEEEE
Q 010752 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWD-TDVVI--------ELKVGDKIEKVRFFH 156 (502)
Q Consensus 86 kIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~~ 156 (502)
||+||++|++|+.++||+++++++|+++|+++||+|.|++|.|+...+... ..... .+++.. ...+++++
T Consensus 1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~v~~ 79 (245)
T PF08323_consen 1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKYGFIDEEYFQLEPVRRLSVPFGGPVPVGV-WYEVRVYR 79 (245)
T ss_dssp EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-THHHHHHCTTEEEEEEES-STTCEEEEE-----EEEEE
T ss_pred CEEEEEcccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccchhhhhhhhcceEEEEecccccccccccc-ceEEEEEE
Confidence 799999999999999999999999999999999999999999976655441 11111 122222 15677888
Q ss_pred EeecCceEEEEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcC
Q 010752 157 CHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAND 236 (502)
Q Consensus 157 ~~~~gv~v~~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~ 236 (502)
...+||++++++++.++.+ ..+|++. +.+|.|+..||.+|+++++++++.+++ +|| ||||||
T Consensus 80 ~~~~~v~v~~i~~~~~f~r------~~iY~~~-~~~~~d~~~rf~~fs~a~le~~~~l~~----------~pD-IIH~hD 141 (245)
T PF08323_consen 80 YPVDGVPVYFIDNPEYFDR------PGIYGDN-GGDYPDNAERFAFFSRAALELLKKLGW----------KPD-IIHCHD 141 (245)
T ss_dssp EEETTEEEEEEESHHHHGS------SSSSBST-SSBHTTHHHHHHHHHHHHHHHHCTCT-----------S-S-EEEEEC
T ss_pred EEcCCccEEEecChhhccc------cceeccC-CCcchhHHHHHHHHHHHHHHHHHhhCC----------CCC-EEEecC
Confidence 8889999999999998765 4599876 778999999999999999999998753 699 899999
Q ss_pred CccchHHHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHh
Q 010752 237 WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILE 316 (502)
Q Consensus 237 ~~t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 316 (502)
|+|+++|.+++..++..+.+.++|+++||||..|||.++...+..+++|.......+.. .....+|++|.++..
T Consensus 142 W~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~------~~~~~in~lk~gi~~ 215 (245)
T PF08323_consen 142 WHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEY------EFYGQINFLKAGIVY 215 (245)
T ss_dssp GGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTT------EETTEEEHHHHHHHH
T ss_pred chHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhcccccc------ccccccCHHHHHHHh
Confidence 99999999999999888888999999999999999999988888888887543222211 223578999999999
Q ss_pred cCccccCCHHHHHHHHcCCCCCCcchhhhc
Q 010752 317 SDMVLTVSPHYAQELVSGEDKGVELDNIIR 346 (502)
Q Consensus 317 ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~ 346 (502)
||.|+|||+.+++++.+ ..+|..++.+++
T Consensus 216 AD~v~TVS~~Ya~Ei~~-~~~g~GL~~~l~ 244 (245)
T PF08323_consen 216 ADKVTTVSPTYAREIQT-PEFGEGLEGLLR 244 (245)
T ss_dssp SSEEEESSHHHHHHTTS-HHHHTT-HHHHH
T ss_pred cCEeeeCCHHHHHHHhC-cccCCChHHHhc
Confidence 99999999999999996 556667766554
No 11
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=100.00 E-value=1e-31 Score=296.22 Aligned_cols=390 Identities=19% Similarity=0.259 Sum_probs=292.9
Q ss_pred eEEEEeeecc-----CccccccHHHHHhhhHHHHHHCCCeEEEEEecCCC--C-------------ccccCC--------
Q 010752 86 NILFVGTEVA-----PWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ--Y-------------KDAWDT-------- 137 (502)
Q Consensus 86 kIl~V~~~~~-----P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~--~-------------~~~~~~-------- 137 (502)
-|+++|.||. | ...||+|...+...++++..|..++-+.-.|.+ . .+.|+.
T Consensus 87 ~~aYFs~E~gl~~~lp-iYsGGLG~LAgd~lksasdLg~P~vgvGllY~~GyF~Q~i~~dG~Q~e~~~~~~~~~~p~~~~ 165 (778)
T cd04299 87 VAAYFSMEFGLHESLP-IYSGGLGILAGDHLKAASDLGLPLVGVGLLYRQGYFRQRLDADGWQQETYPVNDFEQLPLEPV 165 (778)
T ss_pred eeEEeccccccCCCCC-ccCchHHHHHHHHHHHHHhCCCCEEEEEeCcCCCCeEEEECCCCceeecCCCcCCCCCceEEE
Confidence 4559999987 5 378999999999999999999999999876542 0 111211
Q ss_pred ------ceEEEEEeCCeeeEEEEEEEeecCceEEEEeCCcccccccCCCC-CcccCCCCCCCCcchHHHH---HHHHHHH
Q 010752 138 ------DVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQ-SKIYGPRTGEDYQDNQLRF---SLLCQAA 207 (502)
Q Consensus 138 ------~~~~~~~~~~~~~~~~~~~~~~~gv~v~~i~~p~~~~~~~~~~~-~~~y~~~~g~~~~~~~~r~---~~~~~a~ 207 (502)
...+.+++..+...++.++...++|++|++|++.+-...+.+.. ..+|+ .|+..|+ .+|+.+.
T Consensus 166 ~~~~G~~~~v~v~l~g~~v~~rvw~~~vg~v~lylLDtd~~~n~~~~R~iT~~LYg-------~D~~~Rl~Qe~~Lg~ag 238 (778)
T cd04299 166 RDADGEPVRVSVELPGRTVYARVWKAQVGRVPLYLLDTDIPENSPDDRGITDRLYG-------GDQETRIQQEILLGIGG 238 (778)
T ss_pred ecCCCCeEEEEEeeCCCceEEEEEEEEcCCCCEEEecCCccccchhhcccccCCCC-------CcHHHHHHHHHHHHHHH
Confidence 23456667777778888888888999999999875333333322 25786 3578884 8899999
Q ss_pred HHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHHH-----HHHHh-ccCCC--CcCCCeEEEEEecCcccc--ccccc
Q 010752 208 LEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC-----YLKTM-YKPKG--MYKSAKVVFCIHNIAYQG--RFAFE 277 (502)
Q Consensus 208 ~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~~-----~lk~~-~~~~~--~~~~~pvv~tiH~~~~~g--~~~~~ 277 (502)
+++++.++. +|| |||+||||++++++ +++.. +.... -..+..++||+|+..++| .|+..
T Consensus 239 l~~Lr~lg~----------~pd-ViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~ 307 (778)
T cd04299 239 VRALRALGI----------KPT-VYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPD 307 (778)
T ss_pred HHHHHHhCC----------CCe-EEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHH
Confidence 999987753 599 99999999999998 54321 10000 013578999999999999 89877
Q ss_pred ccc--------ccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccccCCHHH---HHHHHcCCCCCCcchhhhc
Q 010752 278 DFG--------LLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHY---AQELVSGEDKGVELDNIIR 346 (502)
Q Consensus 278 ~~~--------~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~---~~~l~~~~~~g~~~~~~~~ 346 (502)
.+. .++++.+.......... .. ....+++++.++..||.|.+||+-+ .+++-...+.|.+++
T Consensus 308 l~~~~~~~~~~~lgl~~~~~~~lg~e~~-~~--~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~~~~g~p~~---- 380 (778)
T cd04299 308 LVERYFGPYARELGLSRDRFLALGRENP-GD--DPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAGLWPGFPVE---- 380 (778)
T ss_pred HHHHHhhHHHHHcCCCHHHHhhhccccc-cC--ccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhhhhccCCcc----
Confidence 763 35666553332211111 00 0135799999999999999999998 555554334444443
Q ss_pred cccEEEeeCCCcCCCCC-CCcccccccccC---------------------cchhccchHHHHHHHHHHh----------
Q 010752 347 KTGIKGIVNGMDVQEWN-PLTDKYIGVKYD---------------------ASTVMDAKPLLKEALQAEV---------- 394 (502)
Q Consensus 347 ~~~i~vI~NGvd~~~~~-p~~~~~i~~~~~---------------------~~~~~~~k~~~k~~l~~~~---------- 394 (502)
..++..|.||||...|. |..++.+. +|. ...+..+|..+|++|++.+
T Consensus 381 ~~~i~~ITNGVh~~~W~~P~~~~l~~-~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~ 459 (778)
T cd04299 381 EVPIGHVTNGVHVPTWVAPEMRELYD-RYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLR 459 (778)
T ss_pred cCceeceeCCcchhhhcCHHHHHHHH-HhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 23789999999999998 87766652 221 1233468888888888764
Q ss_pred -----------CCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc------CCeEEEEEeCCCh------hhHHHHHHH
Q 010752 395 -----------GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGKK------PMEKQLEQL 451 (502)
Q Consensus 395 -----------gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~------~~v~lvivG~g~~------~~~~~l~~l 451 (502)
+.+.|++.++|+|+.|+.++||.+++++.+.+|.+ .++|||+.|.+.+ .+.+.+.++
T Consensus 460 ~g~~~~~~~~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~ 539 (778)
T cd04299 460 RGASAEEIGEADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADEPGKELIQEIVEF 539 (778)
T ss_pred cCCchhhhhhcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccchHHHHHHHHHHHH
Confidence 66688999999999999999999999999888744 4799999999874 455577777
Q ss_pred HH--HCCCceEEEeecChHHHHHHHHhcCEEEEcCC--CCCCcHHHHHHHHcCCC
Q 010752 452 EI--LYPEKARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 452 ~~--~~~~~v~~~~~~~~~~~~~ila~ADi~l~PS~--~E~fglv~lEAma~G~P 502 (502)
.+ .+++++.++..|+...++.++++||++++||+ +|+||++.+-||..|.+
T Consensus 540 a~~p~~~~kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~L 594 (778)
T cd04299 540 SRRPEFRGRIVFLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGL 594 (778)
T ss_pred HhCcCCCCcEEEEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCe
Confidence 77 56789999999999999999999999999999 99999999999999874
No 12
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=5.2e-31 Score=276.13 Aligned_cols=289 Identities=20% Similarity=0.253 Sum_probs=202.9
Q ss_pred eEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceEE
Q 010752 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (502)
Q Consensus 86 kIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 165 (502)
||++|+..|.| ..||.+.++.+|+++|+++||+|.|+++.++..... ....+|++++
T Consensus 1 kI~~v~~~~~p--~~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~---------------------~~~~~~i~v~ 57 (398)
T cd03796 1 RICMVSDFFYP--NLGGVETHIYQLSQCLIKRGHKVVVITHAYGNRVGI---------------------RYLTNGLKVY 57 (398)
T ss_pred CeeEEeecccc--ccccHHHHHHHHHHHHHHcCCeeEEEeccCCcCCCc---------------------ccccCceeEE
Confidence 79999999999 489999999999999999999999999864322110 0112466666
Q ss_pred EEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchH--H
Q 010752 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI--P 243 (502)
Q Consensus 166 ~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~--~ 243 (502)
.++....... ..+ . ++......+.+.++. ++|| |||+|++.+... .
T Consensus 58 ~~p~~~~~~~------~~~---------~----~~~~~~~~l~~~~~~------------~~~D-iIh~~~~~~~~~~~~ 105 (398)
T cd03796 58 YLPFVVFYNQ------STL---------P----TFFGTFPLLRNILIR------------ERIT-IVHGHQAFSALAHEA 105 (398)
T ss_pred EecceeccCC------ccc---------c----chhhhHHHHHHHHHh------------cCCC-EEEECCCCchHHHHH
Confidence 5532211110 000 0 000111222222222 2699 999998776543 2
Q ss_pred HHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccccC
Q 010752 244 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323 (502)
Q Consensus 244 ~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 323 (502)
..+.+. .++|+++|.|+... ..+ .... ....+++..+..+|.++++
T Consensus 106 ~~~~~~-------~~~~~v~t~h~~~~-----~~~-----~~~~-----------------~~~~~~~~~~~~~d~ii~~ 151 (398)
T cd03796 106 LLHART-------MGLKTVFTDHSLFG-----FAD-----ASSI-----------------HTNKLLRFSLADVDHVICV 151 (398)
T ss_pred HHHhhh-------cCCcEEEEeccccc-----ccc-----hhhH-----------------HhhHHHHHhhccCCEEEEe
Confidence 222322 57999999996421 000 0000 0112335557789999999
Q ss_pred CHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCc
Q 010752 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (502)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p 403 (502)
|+...+.+.. ..+++.+ ++.+||||+|.+.|.|..++ .+++.+
T Consensus 152 s~~~~~~~~~--~~~~~~~------k~~vi~ngvd~~~f~~~~~~-----------------------------~~~~~~ 194 (398)
T cd03796 152 SHTSKENTVL--RASLDPE------RVSVIPNAVDSSDFTPDPSK-----------------------------RDNDKI 194 (398)
T ss_pred cHhHhhHHHH--HhCCChh------hEEEEcCccCHHHcCCCccc-----------------------------CCCCce
Confidence 9999876542 1333333 78999999999888775421 124677
Q ss_pred EEEEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeecChHHHHHHHHhcCE
Q 010752 404 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADF 479 (502)
Q Consensus 404 ~i~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~ila~ADi 479 (502)
+|+|+||+.++||++.+++|++++.+ ++++|+++|+|+ ..+.++++.++++ +++.+.+..+.+++..+|+.||+
T Consensus 195 ~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad~ 272 (398)
T cd03796 195 TIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGP--KRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHI 272 (398)
T ss_pred EEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCc--hHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCCE
Confidence 99999999999999999999998865 689999999987 4566777777654 66889988888899999999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCC
Q 010752 480 ILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 480 ~l~PS~~E~fglv~lEAma~G~P 502 (502)
+++||.+|+||++++|||+||+|
T Consensus 273 ~v~pS~~E~~g~~~~EAma~G~P 295 (398)
T cd03796 273 FLNTSLTEAFCIAIVEAASCGLL 295 (398)
T ss_pred EEeCChhhccCHHHHHHHHcCCC
Confidence 99999999999999999999998
No 13
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.97 E-value=1.3e-29 Score=266.45 Aligned_cols=323 Identities=19% Similarity=0.219 Sum_probs=214.4
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v 164 (502)
|||++|+..|+| ..||.+.++.+|+++|.++||+|+|+|+... ++ .|+.... ........+..+|+++
T Consensus 1 mkIlii~~~~~P--~~~g~~~~~~~l~~~L~~~G~~V~vit~~~~-~~-~~~~~~~--------~~~~~~~~~~~~~i~v 68 (412)
T PRK10307 1 MKILVYGINYAP--ELTGIGKYTGEMAEWLAARGHEVRVITAPPY-YP-QWRVGEG--------YSAWRYRRESEGGVTV 68 (412)
T ss_pred CeEEEEecCCCC--CccchhhhHHHHHHHHHHCCCeEEEEecCCC-CC-CCCCCcc--------cccccceeeecCCeEE
Confidence 899999999888 5899999999999999999999999997521 11 1111000 0000111233568888
Q ss_pred EEEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHH-HHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCcc--ch
Q 010752 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQ-AALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT--SL 241 (502)
Q Consensus 165 ~~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~-a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t--~~ 241 (502)
++++....... .. + ........+.. ......+.+. ++|| |||+|.+.. ++
T Consensus 69 ~r~~~~~~~~~---------~~------~-~~~~~~~~~~~~~~~~~~~~~~----------~~~D-iv~~~~p~~~~~~ 121 (412)
T PRK10307 69 WRCPLYVPKQP---------SG------L-KRLLHLGSFALSSFFPLLAQRR----------WRPD-RVIGVVPTLFCAP 121 (412)
T ss_pred EEccccCCCCc---------cH------H-HHHHHHHHHHHHHHHHHhhccC----------CCCC-EEEEeCCcHHHHH
Confidence 87743211000 00 0 01111111111 1112222211 2699 899986442 33
Q ss_pred HHHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchH-HHHHHHHHhcCcc
Q 010752 242 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI-NWMKAGILESDMV 320 (502)
Q Consensus 242 ~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~-~~~k~~~~~ad~v 320 (502)
.+..+++. .++|+++++|+......+. .+... . ....+.. .+++..++.+|.|
T Consensus 122 ~~~~~~~~-------~~~~~v~~~~d~~~~~~~~------~~~~~---~----------~~~~~~~~~~~~~~~~~ad~i 175 (412)
T PRK10307 122 GARLLARL-------SGARTWLHIQDYEVDAAFG------LGLLK---G----------GKVARLATAFERSLLRRFDNV 175 (412)
T ss_pred HHHHHHHh-------hCCCEEEEeccCCHHHHHH------hCCcc---C----------cHHHHHHHHHHHHHHhhCCEE
Confidence 44445543 4789999998643211000 00000 0 0000111 2346678899999
Q ss_pred ccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCC
Q 010752 321 LTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 400 (502)
Q Consensus 321 i~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~ 400 (502)
+++|+..++.+.+ ++.+.+ ++.+||||+|.+.|.|..+. ..+.+++++|++ +
T Consensus 176 i~~S~~~~~~~~~---~~~~~~------~i~vi~ngvd~~~~~~~~~~-----------------~~~~~~~~~~~~--~ 227 (412)
T PRK10307 176 STISRSMMNKARE---KGVAAE------KVIFFPNWSEVARFQPVADA-----------------DVDALRAQLGLP--D 227 (412)
T ss_pred EecCHHHHHHHHH---cCCCcc------cEEEECCCcCHhhcCCCCcc-----------------chHHHHHHcCCC--C
Confidence 9999999999874 354444 78999999999888764311 123467777775 4
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHHCC-CceEEEeecChHHHHHHHHhcC
Q 010752 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP-EKARGVAKFNIPLAHMIIAGAD 478 (502)
Q Consensus 401 ~~p~i~~iGrl~~~KG~d~ll~Al~~L~~-~~v~lvivG~g~~~~~~~l~~l~~~~~-~~v~~~~~~~~~~~~~ila~AD 478 (502)
+.++|+|+||+.+.||++.+++|++++.+ ++++|+|+|+|+ .++.++++.+.++ +++.+.+..+.+++..+|+.||
T Consensus 228 ~~~~i~~~G~l~~~kg~~~li~a~~~l~~~~~~~l~ivG~g~--~~~~l~~~~~~~~l~~v~f~G~~~~~~~~~~~~~aD 305 (412)
T PRK10307 228 GKKIVLYSGNIGEKQGLELVIDAARRLRDRPDLIFVICGQGG--GKARLEKMAQCRGLPNVHFLPLQPYDRLPALLKMAD 305 (412)
T ss_pred CCEEEEEcCccccccCHHHHHHHHHHhccCCCeEEEEECCCh--hHHHHHHHHHHcCCCceEEeCCCCHHHHHHHHHhcC
Confidence 56799999999999999999999998865 579999999987 5567777777654 4688888888889999999999
Q ss_pred EEEEcCCCCC----CcHHHHHHHHcCCC
Q 010752 479 FILIPSRFEP----CGLIQLHAMRYGTV 502 (502)
Q Consensus 479 i~l~PS~~E~----fglv~lEAma~G~P 502 (502)
++++||..|+ +|..++|||+||+|
T Consensus 306 i~v~ps~~e~~~~~~p~kl~eama~G~P 333 (412)
T PRK10307 306 CHLLPQKAGAADLVLPSKLTNMLASGRN 333 (412)
T ss_pred EeEEeeccCcccccCcHHHHHHHHcCCC
Confidence 9999999998 46678999999998
No 14
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.97 E-value=1e-29 Score=266.21 Aligned_cols=313 Identities=19% Similarity=0.250 Sum_probs=212.4
Q ss_pred EEEEeeeccCcc-----ccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecC
Q 010752 87 ILFVGTEVAPWS-----KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (502)
Q Consensus 87 Il~V~~~~~P~~-----~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (502)
|++|+....|+. ..||.+.++.+|+++|+++||+|+|+|+........ .....+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~--------------------~~~~~~~ 60 (405)
T TIGR03449 1 VAMISMHTSPLQQPGTGDAGGMNVYILETATELARRGIEVDIFTRATRPSQPP--------------------VVEVAPG 60 (405)
T ss_pred CeEEeccCCccccCCCcCCCCceehHHHHHHHHhhCCCEEEEEecccCCCCCC--------------------ccccCCC
Confidence 567777777752 269999999999999999999999999764221110 0112357
Q ss_pred ceEEEEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHH-HhhhhhcccCCCCCCCCCCCCEEEEEcCCccc
Q 010752 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAAL-EAPRILNLNSNKYFSGPYGEDVVFVANDWHTS 240 (502)
Q Consensus 162 v~v~~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~-~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~ 240 (502)
+.++.++...+... ....-...+..+....+ ..++.. +.+|| |||+|+|.++
T Consensus 61 ~~v~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~D-iih~h~~~~~ 113 (405)
T TIGR03449 61 VRVRNVVAGPYEGL----------------DKEDLPTQLCAFTGGVLRAEARHE----------PGYYD-LIHSHYWLSG 113 (405)
T ss_pred cEEEEecCCCcccC----------------CHHHHHHHHHHHHHHHHHHHhhcc----------CCCCC-eEEechHHHH
Confidence 77776533222110 00000111111222222 222221 12699 8999998887
Q ss_pred hHHHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCcc
Q 010752 241 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 320 (502)
Q Consensus 241 ~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 320 (502)
+++.++++. .++|+++|+|+..... ...+.....+. ......+.+..+..+|.+
T Consensus 114 ~~~~~~~~~-------~~~p~v~t~h~~~~~~---~~~~~~~~~~~----------------~~~~~~~e~~~~~~~d~v 167 (405)
T TIGR03449 114 QVGWLLRDR-------WGVPLVHTAHTLAAVK---NAALADGDTPE----------------PEARRIGEQQLVDNADRL 167 (405)
T ss_pred HHHHHHHHh-------cCCCEEEeccchHHHH---HHhccCCCCCc----------------hHHHHHHHHHHHHhcCeE
Confidence 777776654 4789999999753210 00000000000 001111225567899999
Q ss_pred ccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCC
Q 010752 321 LTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 400 (502)
Q Consensus 321 i~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~ 400 (502)
+++|+...+.+.. .+|.+.+ ++.+|+||+|.+.|.|.. ++..+.+++++ +
T Consensus 168 i~~s~~~~~~~~~--~~~~~~~------ki~vi~ngvd~~~~~~~~--------------------~~~~~~~~~~~--~ 217 (405)
T TIGR03449 168 IANTDEEARDLVR--HYDADPD------RIDVVAPGADLERFRPGD--------------------RATERARLGLP--L 217 (405)
T ss_pred EECCHHHHHHHHH--HcCCChh------hEEEECCCcCHHHcCCCc--------------------HHHHHHhcCCC--C
Confidence 9999999888874 3454444 789999999998886642 33456777765 4
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHhhccc--CC--eEEEEEeCCCh---hhHHHHHHHHHHCC--CceEEEeecChHHHH
Q 010752 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN--VQIIVLGTGKK---PMEKQLEQLEILYP--EKARGVAKFNIPLAH 471 (502)
Q Consensus 401 ~~p~i~~iGrl~~~KG~d~ll~Al~~L~~--~~--v~lvivG~g~~---~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~ 471 (502)
+.++|+|+||+.+.||++.+++|++++.+ ++ ++|+++|.+.. ...+.++++.++++ +++.+.+..+.+++.
T Consensus 218 ~~~~i~~~G~l~~~K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~ 297 (405)
T TIGR03449 218 DTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELV 297 (405)
T ss_pred CCcEEEEecCCCcccCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHHH
Confidence 67899999999999999999999999865 34 99999996321 24566777777665 568888888888899
Q ss_pred HHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 472 MIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 472 ~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
.+|+.||++++||..|+||++++|||++|+|
T Consensus 298 ~~l~~ad~~v~ps~~E~~g~~~lEAma~G~P 328 (405)
T TIGR03449 298 HVYRAADVVAVPSYNESFGLVAMEAQACGTP 328 (405)
T ss_pred HHHHhCCEEEECCCCCCcChHHHHHHHcCCC
Confidence 9999999999999999999999999999998
No 15
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=99.97 E-value=1.4e-29 Score=283.74 Aligned_cols=370 Identities=17% Similarity=0.129 Sum_probs=224.8
Q ss_pred cCCceEEEEeeeccC---------ccccccHHHHHhhhHHHHHHCC--CeEEEEEecCCCCccccCCceEEEEEeCCeee
Q 010752 82 GVGLNILFVGTEVAP---------WSKTGGLGDVLGGLPPALAANG--HRVMTIAPRYDQYKDAWDTDVVIELKVGDKIE 150 (502)
Q Consensus 82 ~~~MkIl~V~~~~~P---------~~~~GG~~~~v~~La~aLa~~G--h~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~ 150 (502)
.++|.|++|+..-.| -..+||..+||.+||++|+++| |+|+|+|.......-.|+...+.+..-....+
T Consensus 167 ~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~~~ 246 (1050)
T TIGR02468 167 EKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRSSE 246 (1050)
T ss_pred cCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCccccccccccc
Confidence 357999999865442 1478999999999999999998 99999997654311123322222111000000
Q ss_pred EEEEEEEeecCceEEEEeCC---cccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhh----hcccCCCCCC
Q 010752 151 KVRFFHCHKRGVDRVFVDHP---WFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRI----LNLNSNKYFS 223 (502)
Q Consensus 151 ~~~~~~~~~~gv~v~~i~~p---~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~----l~~~~~~~~~ 223 (502)
.........+|+.+++++.. .++.+ .+-.....-|...+++.++. +.. .+.
T Consensus 247 ~~~~~~~~~~g~rIvRip~GP~~~~l~K------------------e~L~~~l~ef~d~~l~~~~~~~~~~~~----~~~ 304 (1050)
T TIGR02468 247 NDGDEMGESSGAYIIRIPFGPRDKYIPK------------------EELWPYIPEFVDGALSHIVNMSKVLGE----QIG 304 (1050)
T ss_pred cccccccCCCCeEEEEeccCCCCCCcCH------------------HHHHHHHHHHHHHHHHHHHhhhhhhhh----hhc
Confidence 00001112358888877532 13332 11112223344444444322 110 000
Q ss_pred -C-CCCCCEEEEEcCCccchHHHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCC
Q 010752 224 -G-PYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKP 301 (502)
Q Consensus 224 -~-~~~pDvVih~h~~~t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~ 301 (502)
| +..|| |||+|+|.++.++..++.. .++|+|+|.|...-.. +. .++........ .....|.
T Consensus 305 ~~~~~~pD-vIHaHyw~sG~aa~~L~~~-------lgVP~V~T~HSLgr~K-~~----~ll~~g~~~~~--~~~~~y~-- 367 (1050)
T TIGR02468 305 SGHPVWPY-VIHGHYADAGDSAALLSGA-------LNVPMVLTGHSLGRDK-LE----QLLKQGRMSKE--EINSTYK-- 367 (1050)
T ss_pred cccCCCCC-EEEECcchHHHHHHHHHHh-------hCCCEEEECccchhhh-hh----hhccccccccc--ccccccc--
Confidence 0 11399 9999999999999999986 4899999999763111 00 00000000000 0000010
Q ss_pred cccchHHHHHHHHHhcCccccCCHHHHHHHHcCCCCC-Ccch--hh----hc---------cccEEEeeCCCcCCCCCCC
Q 010752 302 VRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKG-VELD--NI----IR---------KTGIKGIVNGMDVQEWNPL 365 (502)
Q Consensus 302 ~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g-~~~~--~~----~~---------~~~i~vI~NGvd~~~~~p~ 365 (502)
..+.+...+..+..||.||++|+..++++.+ .|+ .++. .. ++ ..++.|||||||++.|.|.
T Consensus 368 -~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~--lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~ 444 (1050)
T TIGR02468 368 -IMRRIEAEELSLDASEIVITSTRQEIEEQWG--LYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPH 444 (1050)
T ss_pred -hHHHHHHHHHHHHhcCEEEEeCHHHHHHHHH--HhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCC
Confidence 0134556677899999999999999988764 222 2210 00 10 1288999999999999885
Q ss_pred cccccccccCcchh------ccchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc----CCeEEE
Q 010752 366 TDKYIGVKYDASTV------MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK----ENVQII 435 (502)
Q Consensus 366 ~~~~i~~~~~~~~~------~~~k~~~k~~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~----~~v~lv 435 (502)
.... +.... ....+....++++.+. +++.|+|+|+||+.++||++.||+|+.++.+ +++. +
T Consensus 445 ~~~~-----~~~~~~~~~~~~~~~~~~~~~l~r~~~---~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-L 515 (1050)
T TIGR02468 445 DGDM-----DGETEGNEEHPAKPDPPIWSEIMRFFT---NPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-L 515 (1050)
T ss_pred Cccc-----cchhcccccccccccchhhHHHHhhcc---cCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-E
Confidence 3210 00000 0000111234444433 3578899999999999999999999999864 3565 4
Q ss_pred EEeCCCh---------hhHHHHHHHHHHCC--CceEEEeecChHHHHHHHHhc----CEEEEcCCCCCCcHHHHHHHHcC
Q 010752 436 VLGTGKK---------PMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGA----DFILIPSRFEPCGLIQLHAMRYG 500 (502)
Q Consensus 436 ivG~g~~---------~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~ila~A----Di~l~PS~~E~fglv~lEAma~G 500 (502)
|+|.++. .....++++..+++ ++|.+.+..+.+++..+|+.| |+|++||.+|+||++++|||+||
T Consensus 516 IiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcG 595 (1050)
T TIGR02468 516 IMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 595 (1050)
T ss_pred EEecCchhhhhhccchHHHHHHHHHHHHhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhC
Confidence 5676542 12345666666655 678887777788888999988 69999999999999999999999
Q ss_pred CC
Q 010752 501 TV 502 (502)
Q Consensus 501 ~P 502 (502)
+|
T Consensus 596 lP 597 (1050)
T TIGR02468 596 LP 597 (1050)
T ss_pred CC
Confidence 98
No 16
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.97 E-value=2.4e-29 Score=267.17 Aligned_cols=320 Identities=19% Similarity=0.159 Sum_probs=198.8
Q ss_pred ccccHHHHHhhhHHHHHHCCC--eEEEEEecCCCCc--cccCCceEEEEEeCCeeeEEEEEEEeecCceEEEEeCCcccc
Q 010752 99 KTGGLGDVLGGLPPALAANGH--RVMTIAPRYDQYK--DAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLA 174 (502)
Q Consensus 99 ~~GG~~~~v~~La~aLa~~Gh--~V~vitp~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~i~~p~~~~ 174 (502)
..||++.++.+|+++|+++|| +|+|+|..++... +.+. .-.....+|+++++++....
T Consensus 24 ~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~----------------~~~~~~~~gv~v~r~~~~~~-- 85 (439)
T TIGR02472 24 DTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYA----------------QPIERIAPGARIVRLPFGPR-- 85 (439)
T ss_pred CCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccC----------------CCeeEeCCCcEEEEecCCCC--
Confidence 689999999999999999997 9999997643210 1100 00123346888887753210
Q ss_pred cccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHHHHHHHhccCCC
Q 010752 175 KVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKG 254 (502)
Q Consensus 175 ~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~~~lk~~~~~~~ 254 (502)
.+.. ..+-...+..+...+.+.++... .+|| |||+|.|.+++++..+++.
T Consensus 86 ---------~~~~-----~~~~~~~~~~~~~~l~~~~~~~~----------~~~D-vIH~h~~~~~~~~~~~~~~----- 135 (439)
T TIGR02472 86 ---------RYLR-----KELLWPYLDELADNLLQHLRQQG----------HLPD-LIHAHYADAGYVGARLSRL----- 135 (439)
T ss_pred ---------CCcC-----hhhhhhhHHHHHHHHHHHHHHcC----------CCCC-EEEEcchhHHHHHHHHHHH-----
Confidence 0100 00111112234455555554321 1599 9999998888877777664
Q ss_pred CcCCCeEEEEEecCccccccccccccccCC-CcccccccccccCCCCCcccchHHHHHHHHHhcCccccCCHHHHHHHHc
Q 010752 255 MYKSAKVVFCIHNIAYQGRFAFEDFGLLNL-PAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVS 333 (502)
Q Consensus 255 ~~~~~pvv~tiH~~~~~g~~~~~~~~~l~l-p~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~ 333 (502)
.++|+|+|.|+...... ..+...+. +..+ ...|. ....+.+.+..+..+|.|+++|+...++...
T Consensus 136 --~~~p~V~t~H~~~~~~~---~~~~~~~~~~~~~------~~~~~---~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~ 201 (439)
T TIGR02472 136 --LGVPLIFTGHSLGREKR---RRLLAAGLKPQQI------EKQYN---ISRRIEAEEETLAHASLVITSTHQEIEEQYA 201 (439)
T ss_pred --hCCCEEEecccccchhh---hhcccCCCChhhh------hhhcc---hHHHHHHHHHHHHhCCEEEECCHHHHHHHHH
Confidence 47899999996432100 00000000 0000 00000 0122345567788999999999775544331
Q ss_pred CCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCcEEEEEcCccc
Q 010752 334 GEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEE 413 (502)
Q Consensus 334 ~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p~i~~iGrl~~ 413 (502)
...+++.+ ++.+||||+|.+.|.|.... ......++.++.. +. .++.++|+|+||+.+
T Consensus 202 -~~~~~~~~------ki~vIpnGvd~~~f~~~~~~------------~~~~~~~~~~~~~-~~--~~~~~~i~~vGrl~~ 259 (439)
T TIGR02472 202 -LYDSYQPE------RMQVIPPGVDLSRFYPPQSS------------EETSEIDNLLAPF-LK--DPEKPPILAISRPDR 259 (439)
T ss_pred -hccCCCcc------ceEEECCCcChhhcCCCCcc------------ccchhHHHHHHhh-cc--ccCCcEEEEEcCCcc
Confidence 11244444 89999999999998775321 1111233334333 32 246779999999999
Q ss_pred ccCHHHHHHHHhhccc--CCeEEE-EEeCCCh--hh-------HHHHHHHHHHC--CCceEEEeecChHHHHHHHHhc--
Q 010752 414 QKGSDILAAAIPHFIK--ENVQII-VLGTGKK--PM-------EKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGA-- 477 (502)
Q Consensus 414 ~KG~d~ll~Al~~L~~--~~v~lv-ivG~g~~--~~-------~~~l~~l~~~~--~~~v~~~~~~~~~~~~~ila~A-- 477 (502)
+||++.+++|+.++.+ ++.+++ ++|+|+. .+ .+.++++..++ .+++.+.+.++.+++..+|+.|
T Consensus 260 ~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~~~~a~~ 339 (439)
T TIGR02472 260 RKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRLAAR 339 (439)
T ss_pred cCCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHHHHHHhh
Confidence 9999999999986532 234444 5677652 11 12233444443 4678888877888888999987
Q ss_pred --CEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 478 --DFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 478 --Di~l~PS~~E~fglv~lEAma~G~P 502 (502)
|++++||.+|+||++++|||+||+|
T Consensus 340 ~~Dv~v~pS~~E~fg~~~lEAma~G~P 366 (439)
T TIGR02472 340 SRGIFVNPALTEPFGLTLLEAAACGLP 366 (439)
T ss_pred cCCEEecccccCCcccHHHHHHHhCCC
Confidence 9999999999999999999999998
No 17
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.97 E-value=5e-29 Score=258.86 Aligned_cols=298 Identities=21% Similarity=0.296 Sum_probs=203.1
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v 164 (502)
|||++|+..|+|. ..||.+.++.+|+++|+++ |+|.|++...... ..+|+++
T Consensus 1 mkI~~i~~~~~p~-~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~~--------------------------~~~~~~~ 52 (388)
T TIGR02149 1 MKVTVLTREYPPN-VYGGAGVHVEELTRELARL-MDVDVRCFGDQRF--------------------------DSEGLTV 52 (388)
T ss_pred CeeEEEecccCcc-ccccHhHHHHHHHHHHHHh-cCeeEEcCCCchh--------------------------cCCCeEE
Confidence 8999999999884 5699999999999999998 7888887542110 1234555
Q ss_pred EEEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHHH
Q 010752 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (502)
Q Consensus 165 ~~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~~ 244 (502)
+.+..+..+.. +... +..+...+. .... ..++| |||+|.|.+++.+.
T Consensus 53 ~~~~~~~~~~~-----------------~~~~---~~~~~~~~~---~~~~---------~~~~d-ivh~~~~~~~~~~~ 99 (388)
T TIGR02149 53 KGYRPWSELKE-----------------ANKA---LGTFSVDLA---MAND---------PVDAD-VVHSHTWYTFLAGH 99 (388)
T ss_pred EEecChhhccc-----------------hhhh---hhhhhHHHH---HhhC---------CCCCC-eEeecchhhhhHHH
Confidence 54322111100 0000 000111111 1111 12699 99999988876665
Q ss_pred HHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHH-HHHHHHhcCccccC
Q 010752 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINW-MKAGILESDMVLTV 323 (502)
Q Consensus 245 ~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~-~k~~~~~ad~vi~v 323 (502)
.+++. .++|+++++|+......+... .. ...+ ....| .+..+..+|.++++
T Consensus 100 ~~~~~-------~~~p~v~~~h~~~~~~~~~~~---~~------------~~~~------~~~~~~~~~~~~~ad~vi~~ 151 (388)
T TIGR02149 100 LAKKL-------YDKPLVVTAHSLEPLRPWKEE---QL------------GGGY------KLSSWAEKTAIEAADRVIAV 151 (388)
T ss_pred HHHHh-------cCCCEEEEeeccccccccccc---cc------------ccch------hHHHHHHHHHHhhCCEEEEc
Confidence 55443 589999999976421100000 00 0000 11233 36678899999999
Q ss_pred CHHHHHHHHcCCCC-CCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCC
Q 010752 324 SPHYAQELVSGEDK-GVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 402 (502)
Q Consensus 324 S~~~~~~l~~~~~~-g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~ 402 (502)
|+.+++.+.+ .+ ++..+ ++.+|+||+|.+.|.|.. +..+++++|++ ++.
T Consensus 152 S~~~~~~~~~--~~~~~~~~------~i~vi~ng~~~~~~~~~~--------------------~~~~~~~~~~~--~~~ 201 (388)
T TIGR02149 152 SGGMREDILK--YYPDLDPE------KVHVIYNGIDTKEYKPDD--------------------GNVVLDRYGID--RSR 201 (388)
T ss_pred cHHHHHHHHH--HcCCCCcc------eEEEecCCCChhhcCCCc--------------------hHHHHHHhCCC--CCc
Confidence 9999998874 22 44333 789999999998887643 34567788875 467
Q ss_pred cEEEEEcCcccccCHHHHHHHHhhcccCCeEEEEEeCCCh--hhHHHHHHHHHHCCC---ceEEEe-ecChHHHHHHHHh
Q 010752 403 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK--PMEKQLEQLEILYPE---KARGVA-KFNIPLAHMIIAG 476 (502)
Q Consensus 403 p~i~~iGrl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~--~~~~~l~~l~~~~~~---~v~~~~-~~~~~~~~~ila~ 476 (502)
++|+|+||+.++||++.+++|++++. ++++++++|++.. .+.+.++++...++. ++.+.+ ..+.+++..+|+.
T Consensus 202 ~~i~~~Grl~~~Kg~~~li~a~~~l~-~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 280 (388)
T TIGR02149 202 PYILFVGRITRQKGVPHLLDAVHYIP-KDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSN 280 (388)
T ss_pred eEEEEEcccccccCHHHHHHHHHHHh-hcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHh
Confidence 89999999999999999999999884 5788988887642 345566666555442 355554 4677889999999
Q ss_pred cCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 477 ADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 477 ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
||++++||.+|+||++++|||+||+|
T Consensus 281 aDv~v~ps~~e~~g~~~lEA~a~G~P 306 (388)
T TIGR02149 281 AEVFVCPSIYEPLGIVNLEAMACGTP 306 (388)
T ss_pred CCEEEeCCccCCCChHHHHHHHcCCC
Confidence 99999999999999999999999998
No 18
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.97 E-value=1.3e-28 Score=263.31 Aligned_cols=301 Identities=18% Similarity=0.225 Sum_probs=199.4
Q ss_pred cCCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecC
Q 010752 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (502)
Q Consensus 82 ~~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (502)
+++|||++++... |....||.+..+.+|+++|.++||+|+++++..+. .+. ..|
T Consensus 56 ~~~mrI~~~~~~~-~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~-~~~------------------------~~g 109 (465)
T PLN02871 56 SRPRRIALFVEPS-PFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGV-PQE------------------------FHG 109 (465)
T ss_pred CCCceEEEEECCc-CCcccccHHHHHHHHHHHHHHCCCeEEEEecCCCC-Ccc------------------------ccC
Confidence 5679999998533 33478999999999999999999999999976321 110 012
Q ss_pred ceEEEEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccch
Q 010752 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSL 241 (502)
Q Consensus 162 v~v~~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~ 241 (502)
+.++.+.. +... .|. .....+. +...+.+.++.. +|| |||+|......
T Consensus 110 ~~v~~~~~--~~~~--------~~~--------~~~~~~~-~~~~l~~~i~~~------------kpD-iIh~~~~~~~~ 157 (465)
T PLN02871 110 AKVIGSWS--FPCP--------FYQ--------KVPLSLA-LSPRIISEVARF------------KPD-LIHASSPGIMV 157 (465)
T ss_pred ceeeccCC--cCCc--------cCC--------Cceeecc-CCHHHHHHHHhC------------CCC-EEEECCCchhH
Confidence 33221100 0000 000 0000000 011222233322 699 89999754332
Q ss_pred -HHHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCcc
Q 010752 242 -IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 320 (502)
Q Consensus 242 -~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 320 (502)
.+..+.+. .++|++++.|+... ...+ .... .+..+ ....+++...+.+|.+
T Consensus 158 ~~~~~~ak~-------~~ip~V~~~h~~~~-~~~~-----~~~~-----------~~~~~----~~~~~~r~~~~~ad~i 209 (465)
T PLN02871 158 FGALFYAKL-------LCVPLVMSYHTHVP-VYIP-----RYTF-----------SWLVK----PMWDIIRFLHRAADLT 209 (465)
T ss_pred HHHHHHHHH-------hCCCEEEEEecCch-hhhh-----cccc-----------hhhHH----HHHHHHHHHHhhCCEE
Confidence 23333332 58999999996431 0000 0000 00000 1122345667789999
Q ss_pred ccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCC
Q 010752 321 LTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 400 (502)
Q Consensus 321 i~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~ 400 (502)
+++|+..++.+.+ .+.. ...++.+|+||+|.+.|.|..+. .+++.++... .+
T Consensus 210 i~~S~~~~~~l~~---~~~~-----~~~kv~vi~nGvd~~~f~p~~~~-------------------~~~~~~~~~~-~~ 261 (465)
T PLN02871 210 LVTSPALGKELEA---AGVT-----AANRIRVWNKGVDSESFHPRFRS-------------------EEMRARLSGG-EP 261 (465)
T ss_pred EECCHHHHHHHHH---cCCC-----CcCeEEEeCCccCccccCCcccc-------------------HHHHHHhcCC-CC
Confidence 9999999999885 2211 12278999999999988775321 2233333221 23
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCEE
Q 010752 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (502)
Q Consensus 401 ~~p~i~~iGrl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi~ 480 (502)
+.++|+|+||+.++||++.++++++++ ++++|+|+|+|+ +++.++++.+. .++.+.+..+.+++..+|+.||++
T Consensus 262 ~~~~i~~vGrl~~~K~~~~li~a~~~~--~~~~l~ivG~G~--~~~~l~~~~~~--~~V~f~G~v~~~ev~~~~~~aDv~ 335 (465)
T PLN02871 262 EKPLIVYVGRLGAEKNLDFLKRVMERL--PGARLAFVGDGP--YREELEKMFAG--TPTVFTGMLQGDELSQAYASGDVF 335 (465)
T ss_pred CCeEEEEeCCCchhhhHHHHHHHHHhC--CCcEEEEEeCCh--HHHHHHHHhcc--CCeEEeccCCHHHHHHHHHHCCEE
Confidence 678999999999999999999999987 589999999987 56677777654 358898888888999999999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCC
Q 010752 481 LIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 481 l~PS~~E~fglv~lEAma~G~P 502 (502)
|+||.+|+||++++|||+||+|
T Consensus 336 V~pS~~E~~g~~vlEAmA~G~P 357 (465)
T PLN02871 336 VMPSESETLGFVVLEAMASGVP 357 (465)
T ss_pred EECCcccccCcHHHHHHHcCCC
Confidence 9999999999999999999998
No 19
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.96 E-value=3.5e-28 Score=267.72 Aligned_cols=348 Identities=17% Similarity=0.121 Sum_probs=208.2
Q ss_pred CceEEEEeeecc----Cc---cccccHHHHHhhhHHHH--------HHCCC----eEEEEEecCCCCccccCCc-eEEEE
Q 010752 84 GLNILFVGTEVA----PW---SKTGGLGDVLGGLPPAL--------AANGH----RVMTIAPRYDQYKDAWDTD-VVIEL 143 (502)
Q Consensus 84 ~MkIl~V~~~~~----P~---~~~GG~~~~v~~La~aL--------a~~Gh----~V~vitp~~~~~~~~~~~~-~~~~~ 143 (502)
.|||++|+.+.+ |. ..+||..++|.+|+++| +++|| +|.|+|...+.... .+. ..++.
T Consensus 255 ~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~--~~~~~~~e~ 332 (784)
T TIGR02470 255 VFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEG--TTCNQRLEK 332 (784)
T ss_pred cceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCccc--ccccccccc
Confidence 489999998872 21 14799999999999985 68999 77799865432111 000 00000
Q ss_pred EeCCeeeEEEEEEEeecCceEEEEeCCc----ccccccCCCCCcccCCCCCCCCcchHH---HHHHHHHHHHHhhh-hhc
Q 010752 144 KVGDKIEKVRFFHCHKRGVDRVFVDHPW----FLAKVWGKTQSKIYGPRTGEDYQDNQL---RFSLLCQAALEAPR-ILN 215 (502)
Q Consensus 144 ~~~~~~~~~~~~~~~~~gv~v~~i~~p~----~~~~~~~~~~~~~y~~~~g~~~~~~~~---r~~~~~~a~~~~~~-~l~ 215 (502)
. ...+|+.+++++... .+.+ |..... ....|...+.+.++ ..+
T Consensus 333 ~------------~~~~~~~I~rvp~g~~~~~~~~~-----------------~i~k~~l~p~l~~f~~~~~~~~~~~~~ 383 (784)
T TIGR02470 333 V------------YGTEHAWILRVPFRTENGIILRN-----------------WISRFEIWPYLETFAEDAEKEILAELQ 383 (784)
T ss_pred c------------cCCCceEEEEecCCCCccccccc-----------------ccCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 0 011355555553211 0111 111111 22234444444332 221
Q ss_pred ccCCCCCCCCCCCCEEEEEcCCccchHHHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccc
Q 010752 216 LNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFI 295 (502)
Q Consensus 216 ~~~~~~~~~~~~pDvVih~h~~~t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~ 295 (502)
.+|| |||+|.|.+++++..++.. .++|.++|.|...-... ... ++.... + .
T Consensus 384 ----------~~pD-lIHahy~d~glva~lla~~-------lgVP~v~t~HsL~~~K~-~~~-----g~~~~~---~--e 434 (784)
T TIGR02470 384 ----------GKPD-LIIGNYSDGNLVASLLARK-------LGVTQCTIAHALEKTKY-PDS-----DIYWQE---F--E 434 (784)
T ss_pred ----------CCCC-EEEECCCchHHHHHHHHHh-------cCCCEEEECCcchhhcc-ccc-----cccccc---c--h
Confidence 1599 9999999999999888876 48999999997643211 000 000000 0 0
Q ss_pred cCCCCCcccchHHHHHHHHHhcCccccCCHHHHHH----HHcC---C------CCCCcchhh-hccccEEEeeCCCcCCC
Q 010752 296 DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQE----LVSG---E------DKGVELDNI-IRKTGIKGIVNGMDVQE 361 (502)
Q Consensus 296 ~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~----l~~~---~------~~g~~~~~~-~~~~~i~vI~NGvd~~~ 361 (502)
..|. ....+.-....+..||.||+.|...... +.+. . .+++. +.+ ..+.++.+|++|+|...
T Consensus 435 ~~~~---~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vv-nGid~~~~Ki~VVpPGVD~~i 510 (784)
T TIGR02470 435 DKYH---FSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVV-HGIDVFDPKFNIVSPGADESI 510 (784)
T ss_pred hHHH---hhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeee-cCccCCcCCeEEECCCcChhh
Confidence 0000 0001111235678899999999754331 1110 0 11110 000 11238899999999998
Q ss_pred CCCCcccccccccCcchhccchHH------HHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc--CCeE
Q 010752 362 WNPLTDKYIGVKYDASTVMDAKPL------LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQ 433 (502)
Q Consensus 362 ~~p~~~~~i~~~~~~~~~~~~k~~------~k~~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~--~~v~ 433 (502)
|.|.+.+. .+....++. .+++.++.+|+..+++.|+|+++||+.++||++.|++|+.++.+ ++++
T Consensus 511 F~P~~~~~-------~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~ 583 (784)
T TIGR02470 511 YFPYSDKE-------KRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVN 583 (784)
T ss_pred cCCCCchh-------hhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeE
Confidence 87754210 000000000 12455678888777899999999999999999999999988643 5799
Q ss_pred EEEEeCCCh-------h---hHHHHHHHHHHCC--CceEEEeec-ChHHHHHHHH----hcCEEEEcCCCCCCcHHHHHH
Q 010752 434 IIVLGTGKK-------P---MEKQLEQLEILYP--EKARGVAKF-NIPLAHMIIA----GADFILIPSRFEPCGLIQLHA 496 (502)
Q Consensus 434 lvivG~g~~-------~---~~~~l~~l~~~~~--~~v~~~~~~-~~~~~~~ila----~ADi~l~PS~~E~fglv~lEA 496 (502)
|+|+|++.. + ..+.+++++.+++ ++|++.+.. +.....++++ ++|++++||++|+||++++||
T Consensus 584 LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEA 663 (784)
T TIGR02470 584 LVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEA 663 (784)
T ss_pred EEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHH
Confidence 999997642 1 2345666777765 678877754 3333333433 468999999999999999999
Q ss_pred HHcCCC
Q 010752 497 MRYGTV 502 (502)
Q Consensus 497 ma~G~P 502 (502)
|+||+|
T Consensus 664 MAcGlP 669 (784)
T TIGR02470 664 MTCGLP 669 (784)
T ss_pred HHcCCC
Confidence 999998
No 20
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=99.96 E-value=7.5e-30 Score=250.51 Aligned_cols=292 Identities=21% Similarity=0.276 Sum_probs=211.0
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v 164 (502)
++|++|+..|+| .+||++..++.|++.|-+.||.|.++|..|+.... +| ..-+|.++
T Consensus 1 ~~i~mVsdff~P--~~ggveshiy~lSq~li~lghkVvvithayg~r~g------------------ir---ylt~glkV 57 (426)
T KOG1111|consen 1 SRILMVSDFFYP--STGGVESHIYALSQCLIRLGHKVVVITHAYGNRVG------------------IR---YLTNGLKV 57 (426)
T ss_pred CcceeeCccccc--CCCChhhhHHHhhcchhhcCCeEEEEeccccCccc------------------ee---eecCCceE
Confidence 589999999999 79999999999999999999999999998875443 22 23467999
Q ss_pred EEEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHH-
Q 010752 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP- 243 (502)
Q Consensus 165 ~~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~- 243 (502)
|+++-.-.+.. .|=..+|+. +.++-... ++ .+.. |||.|...+.++-
T Consensus 58 yylp~~v~~n~---tT~ptv~~~------------~Pllr~i~---lr-------------E~I~-ivhghs~fS~lahe 105 (426)
T KOG1111|consen 58 YYLPAVVGYNQ---TTFPTVFSD------------FPLLRPIL---LR-------------ERIE-IVHGHSPFSYLAHE 105 (426)
T ss_pred EEEeeeeeecc---cchhhhhcc------------Ccccchhh---hh-------------hceE-EEecCChHHHHHHH
Confidence 98865543332 122233332 11111111 11 1345 8999977766541
Q ss_pred HHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccccC
Q 010752 244 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323 (502)
Q Consensus 244 ~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 323 (502)
.++.... .+.+++||-|+. |+++++...-.+ ..++..+...|++|||
T Consensus 106 ~l~hart------MGlktVfTdHSl-----fGfad~~si~~n----------------------~ll~~sL~~id~~IcV 152 (426)
T KOG1111|consen 106 ALMHART------MGLKTVFTDHSL-----FGFADIGSILTN----------------------KLLPLSLANIDRIICV 152 (426)
T ss_pred HHHHHHh------cCceEEEecccc-----ccccchhhhhhc----------------------ceeeeeecCCCcEEEE
Confidence 1112211 689999999964 343333221111 2223346689999999
Q ss_pred CHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCc
Q 010752 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (502)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p 403 (502)
|..-++... .+-.++++ ++.+|||.++...|.|...+ - ...+..
T Consensus 153 shtskentv--lr~~L~p~------kvsvIPnAv~~~~f~P~~~~---------------------------~-~S~~i~ 196 (426)
T KOG1111|consen 153 SHTSKENTV--LRGALAPA------KVSVIPNAVVTHTFTPDAAD---------------------------K-PSADII 196 (426)
T ss_pred eecCCCceE--EEeccCHh------HeeeccceeeccccccCccc---------------------------c-CCCCee
Confidence 998777655 12334444 89999999999999995421 0 112446
Q ss_pred EEEEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHH--CCCceEEEeecChHHHHHHHHhcCE
Q 010752 404 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEIL--YPEKARGVAKFNIPLAHMIIAGADF 479 (502)
Q Consensus 404 ~i~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~--~~~~v~~~~~~~~~~~~~ila~ADi 479 (502)
.|+.++||.++||+|.++++++++.+ ++++|+|+|+|++ +..+++..++ +++++.+.+..+.+++.+.|.+.|+
T Consensus 197 ~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vrfii~GDGPk--~i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~I 274 (426)
T KOG1111|consen 197 TIVVASRLVYRKGIDLLLEIIPSVCDKHPEVRFIIIGDGPK--RIDLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDI 274 (426)
T ss_pred EEEEEeeeeeccchHHHHHHHHHHHhcCCCeeEEEecCCcc--cchHHHHHHHhhccCceEEecccchHHHHHHHhcCcE
Confidence 89999999999999999999999987 7999999999984 3445555444 4578999999999999999999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCC
Q 010752 480 ILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 480 ~l~PS~~E~fglv~lEAma~G~P 502 (502)
|+.||..|+||++++|||+||+|
T Consensus 275 FlntSlTEafc~~ivEAaScGL~ 297 (426)
T KOG1111|consen 275 FLNTSLTEAFCMVIVEAASCGLP 297 (426)
T ss_pred EeccHHHHHHHHHHHHHHhCCCE
Confidence 99999999999999999999985
No 21
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.96 E-value=2.4e-27 Score=244.15 Aligned_cols=292 Identities=24% Similarity=0.236 Sum_probs=195.2
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v 164 (502)
|||++++. | ..||.+.++.+|+++|+++||+|+|++...+.....+ ..++..
T Consensus 1 mki~~~~~---p--~~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~~~~-----------------------~~~~~~ 52 (371)
T cd04962 1 MKIGIVCY---P--TYGGSGVVATELGKALARRGHEVHFITSSRPFRLDEY-----------------------SPNIFF 52 (371)
T ss_pred CceeEEEE---e--CCCCccchHHHHHHHHHhcCCceEEEecCCCcchhhh-----------------------ccCeEE
Confidence 89999973 4 3699999999999999999999999986532111100 011222
Q ss_pred EEEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHHH
Q 010752 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (502)
Q Consensus 165 ~~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~~ 244 (502)
+.++.+.+-. .. .. . ........+.+.++. .+|| |||+|.+.....+.
T Consensus 53 ~~~~~~~~~~----------~~------~~--~-~~~~~~~~l~~~i~~------------~~~d-ivh~~~~~~~~~~~ 100 (371)
T cd04962 53 HEVEVPQYPL----------FQ------YP--P-YDLALASKIAEVAKR------------YKLD-LLHVHYAVPHAVAA 100 (371)
T ss_pred EEecccccch----------hh------cc--h-hHHHHHHHHHHHHhc------------CCcc-EEeecccCCccHHH
Confidence 1111111000 00 00 0 001122333344333 2699 99999766544433
Q ss_pred HHH-HhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccccC
Q 010752 245 YLK-TMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323 (502)
Q Consensus 245 ~lk-~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 323 (502)
++. ...+. .++|+++++|+....- .... . ....+.+..+..+|.++++
T Consensus 101 ~~~~~~~~~----~~~~~i~~~h~~~~~~---------~~~~-~-----------------~~~~~~~~~~~~~d~ii~~ 149 (371)
T cd04962 101 YLAREILGK----KDLPVVTTLHGTDITL---------VGQD-P-----------------SFQPATRFSIEKSDGVTAV 149 (371)
T ss_pred HHHHHhcCc----CCCcEEEEEcCCcccc---------cccc-c-----------------cchHHHHHHHhhCCEEEEc
Confidence 333 22210 3789999999654210 0000 0 1123446678899999999
Q ss_pred CHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCc
Q 010752 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (502)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p 403 (502)
|+..++.+.+ .++ . ..++.+|+||+|...+.+.. ....+.+++++ ++.+
T Consensus 150 s~~~~~~~~~--~~~-~------~~~i~vi~n~~~~~~~~~~~--------------------~~~~~~~~~~~--~~~~ 198 (371)
T cd04962 150 SESLRQETYE--LFD-I------TKEIEVIPNFVDEDRFRPKP--------------------DEALKRRLGAP--EGEK 198 (371)
T ss_pred CHHHHHHHHH--hcC-C------cCCEEEecCCcCHhhcCCCc--------------------hHHHHHhcCCC--CCCe
Confidence 9999998874 121 1 23789999999987775543 22345566664 4677
Q ss_pred EEEEEcCcccccCHHHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeecChHHHHHHHHhcCEE
Q 010752 404 VIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFI 480 (502)
Q Consensus 404 ~i~~iGrl~~~KG~d~ll~Al~~L~~-~~v~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~ila~ADi~ 480 (502)
+++++||+.+.||++.+++|+.++.+ .+++++++|+|. ..+.++++..+++ +++.+.+.. +++..+|+.||++
T Consensus 199 ~il~~g~l~~~K~~~~li~a~~~l~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~~ 274 (371)
T cd04962 199 VLIHISNFRPVKRIDDVIRIFAKVRKEVPARLLLVGDGP--ERSPAERLARELGLQDDVLFLGKQ--DHVEELLSIADLF 274 (371)
T ss_pred EEEEecccccccCHHHHHHHHHHHHhcCCceEEEEcCCc--CHHHHHHHHHHcCCCceEEEecCc--ccHHHHHHhcCEE
Confidence 89999999999999999999999866 479999999986 4456677666654 567777743 4577899999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCC
Q 010752 481 LIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 481 l~PS~~E~fglv~lEAma~G~P 502 (502)
++||.+|+||++++|||+||+|
T Consensus 275 v~ps~~E~~~~~~~EAma~g~P 296 (371)
T cd04962 275 LLPSEKESFGLAALEAMACGVP 296 (371)
T ss_pred EeCCCcCCCccHHHHHHHcCCC
Confidence 9999999999999999999998
No 22
>PLN02846 digalactosyldiacylglycerol synthase
Probab=99.96 E-value=1.1e-27 Score=252.09 Aligned_cols=316 Identities=15% Similarity=0.086 Sum_probs=185.5
Q ss_pred CCceEEEEeeeccCccccccHHHHHhhhHHHHHHCC-CeEEEEEecCCCCcc--ccCCceEEEEEeCCeeeEEEEEEEee
Q 010752 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-HRVMTIAPRYDQYKD--AWDTDVVIELKVGDKIEKVRFFHCHK 159 (502)
Q Consensus 83 ~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~G-h~V~vitp~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (502)
++|||++++..|.|| ++|+...+..++.+|+++| |+|+|++|.++...+ .|.. ++......+.-.+.+ ..
T Consensus 3 ~~mrIaivTdt~lP~--vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~~~~~~~~~~----~~~f~~~~~~e~~~~-~~ 75 (462)
T PLN02846 3 KKQHIAIFTTASLPW--MTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQKLVYPN----KITFSSPSEQEAYVR-QW 75 (462)
T ss_pred CCCEEEEEEcCCCCC--CCCeeccHHHHHHHHHhcCCcEEEEEecCCccccccccccc----cccccCchhhhhhhh-hh
Confidence 469999999999996 8999999999999999999 899999998753211 1110 001000000000000 00
Q ss_pred cCceEEEEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCcc
Q 010752 160 RGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT 239 (502)
Q Consensus 160 ~gv~v~~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t 239 (502)
.+-.++++....+ ..|...-+.+ .+..+....+.+.++. ++|| |||+|+...
T Consensus 76 ~~~~v~r~~s~~~----------p~yp~r~~~~-----~r~~~~~~~i~~~l~~------------~~pD-VIHv~tP~~ 127 (462)
T PLN02846 76 LEERISFLPKFSI----------KFYPGKFSTD-----KRSILPVGDISETIPD------------EEAD-IAVLEEPEH 127 (462)
T ss_pred ccCeEEEeccccc----------ccCccccccc-----ccccCChHHHHHHHHh------------cCCC-EEEEcCchh
Confidence 0112222211111 0011000000 0111112233344433 3699 999997554
Q ss_pred -chH--HHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHh
Q 010752 240 -SLI--PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILE 316 (502)
Q Consensus 240 -~~~--~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 316 (502)
+.. +..+.++ ..+++.+.|.... ...+ ..... ............|++.. .
T Consensus 128 LG~~~~g~~~~~k--------~~~vV~tyHT~y~-~Y~~-----~~~~g-----------~~~~~l~~~~~~~~~r~--~ 180 (462)
T PLN02846 128 LTWYHHGKRWKTK--------FRLVIGIVHTNYL-EYVK-----REKNG-----------RVKAFLLKYINSWVVDI--Y 180 (462)
T ss_pred hhhHHHHHHHHhc--------CCcEEEEECCChH-HHHH-----Hhccc-----------hHHHHHHHHHHHHHHHH--h
Confidence 443 2233321 2348889996321 1110 00000 00000000112233222 4
Q ss_pred cCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCC
Q 010752 317 SDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGL 396 (502)
Q Consensus 317 ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl 396 (502)
+|.|+++|+...+ +.+ .+...++|||.+.|.|.... +++..+
T Consensus 181 ~d~vi~pS~~~~~-l~~---------------~~i~~v~GVd~~~f~~~~~~---------------------~~~~~~- 222 (462)
T PLN02846 181 CHKVIRLSAATQD-YPR---------------SIICNVHGVNPKFLEIGKLK---------------------LEQQKN- 222 (462)
T ss_pred cCEEEccCHHHHH-Hhh---------------CEEecCceechhhcCCCccc---------------------HhhhcC-
Confidence 8999999986655 442 23445689999988775310 111221
Q ss_pred CCCCCCcEEEEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHH
Q 010752 397 PVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 474 (502)
Q Consensus 397 ~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~il 474 (502)
+.+.-.+.++|+||+.++||++.+++|++++.+ ++++|+|+|+|+ .++.++++..+++.+++++..+.. ..+++
T Consensus 223 ~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp--~~~~L~~~a~~l~l~~~vf~G~~~--~~~~~ 298 (462)
T PLN02846 223 GEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGE--DSDEVKAAAEKLELDVRVYPGRDH--ADPLF 298 (462)
T ss_pred CCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCc--cHHHHHHHHHhcCCcEEEECCCCC--HHHHH
Confidence 211124579999999999999999999999865 589999999998 677888888877644444444432 23699
Q ss_pred HhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 475 AGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 475 a~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
+.+|+||+||.+|+||++++||||||+|
T Consensus 299 ~~~DvFv~pS~~Et~g~v~lEAmA~G~P 326 (462)
T PLN02846 299 HDYKVFLNPSTTDVVCTTTAEALAMGKI 326 (462)
T ss_pred HhCCEEEECCCcccchHHHHHHHHcCCc
Confidence 9999999999999999999999999998
No 23
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.96 E-value=6.8e-27 Score=244.76 Aligned_cols=310 Identities=20% Similarity=0.212 Sum_probs=196.2
Q ss_pred eEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceEE
Q 010752 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (502)
Q Consensus 86 kIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 165 (502)
|||||+..|++ ....||++|+++||+|+++|+......+ .||+++
T Consensus 1 ~il~~~~~~p~---------~~~~la~~L~~~G~~v~~~~~~~~~~~~--------------------------~~v~~~ 45 (396)
T cd03818 1 RILFVHQNFPG---------QFRHLAPALAAQGHEVVFLTEPNAAPPP--------------------------GGVRVV 45 (396)
T ss_pred CEEEECCCCch---------hHHHHHHHHHHCCCEEEEEecCCCCCCC--------------------------CCeeEE
Confidence 69999998765 3567999999999999999987433221 156776
Q ss_pred EEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHHHH
Q 010752 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (502)
Q Consensus 166 ~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~~~ 245 (502)
.+..+..-. .++.+|...........+++.+.+..+..+ .++|| |||+|.... ...+
T Consensus 46 ~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~pd-vi~~h~~~~--~~~~ 102 (396)
T cd03818 46 RYRPPRGPT-------------SGTHPYLREFEEAVLRGQAVARALLALRAK-------GFRPD-VIVAHPGWG--ETLF 102 (396)
T ss_pred EecCCCCCC-------------CCCCccchhHHHHHHHHHHHHHHHHHHHhc-------CCCCC-EEEECCccc--hhhh
Confidence 664322111 012224444433333344444444443211 35799 999996443 2334
Q ss_pred HHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHH-HHHHHHHhcCccccCC
Q 010752 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN-WMKAGILESDMVLTVS 324 (502)
Q Consensus 246 lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~-~~k~~~~~ad~vi~vS 324 (502)
++..+ .++|++...|-... . ...+ .+............. ..+... +....+..+|.++++|
T Consensus 103 l~~~~------~~~~~v~~~~~~~~-~--~~~~---~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ad~vi~~s 164 (396)
T cd03818 103 LKDVW------PDAPLIGYFEFYYR-A--EGAD---VGFDPEFPPSLDDAL------RLRNRNALILLALAQADAGVSPT 164 (396)
T ss_pred HHHhC------CCCCEEEEEeeeec-C--CCCC---CCCCCCCCCchhHHH------HHHHhhhHhHHHHHhCCEEECCC
Confidence 55544 67888887762210 0 0000 000000000000000 001111 1245688999999999
Q ss_pred HHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCcE
Q 010752 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (502)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p~ 404 (502)
++.++.+.+ .+ ..++.+|+||+|.+.|.|.... ...+....+ ..++.++
T Consensus 165 ~~~~~~~~~--~~---------~~ki~vI~ngvd~~~f~~~~~~------------------~~~~~~~~~--~~~~~~~ 213 (396)
T cd03818 165 RWQRSTFPA--EL---------RSRISVIHDGIDTDRLRPDPQA------------------RLRLPNGRV--LTPGDEV 213 (396)
T ss_pred HHHHhhCcH--hh---------ccceEEeCCCccccccCCCchh------------------hhccccccc--CCCCCeE
Confidence 999988763 11 1379999999999998775421 011111111 2246779
Q ss_pred EEEEcC-cccccCHHHHHHHHhhccc--CCeEEEEEeCCCh-----------hhHHHHHHHHHHC-CCceEEEeecChHH
Q 010752 405 IGFIGR-LEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK-----------PMEKQLEQLEILY-PEKARGVAKFNIPL 469 (502)
Q Consensus 405 i~~iGr-l~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~-----------~~~~~l~~l~~~~-~~~v~~~~~~~~~~ 469 (502)
|+|+|| ++++||++.+++|++++.+ ++++|+|+|++.+ ..++.++++..++ .+++.+.+..+.++
T Consensus 214 i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~v~~~~ 293 (396)
T cd03818 214 ITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRVPYDQ 293 (396)
T ss_pred EEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEeCCCCHHH
Confidence 999998 9999999999999999875 6999999997421 1122334443322 25789999888888
Q ss_pred HHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 470 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 470 ~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
+..+|+.||++++||..|++|++++|||+||+|
T Consensus 294 ~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~P 326 (396)
T cd03818 294 YLALLQVSDVHVYLTYPFVLSWSLLEAMACGCL 326 (396)
T ss_pred HHHHHHhCcEEEEcCcccccchHHHHHHHCCCC
Confidence 999999999999999999999999999999998
No 24
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.96 E-value=4e-27 Score=238.60 Aligned_cols=264 Identities=18% Similarity=0.186 Sum_probs=183.8
Q ss_pred ceEEEEeeeccC--ccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCc
Q 010752 85 LNILFVGTEVAP--WSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (502)
Q Consensus 85 MkIl~V~~~~~P--~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (502)
|||++|++.+.| ....||.+.++.+|+.+|.++||+|.++++..+..... . +
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~-----------------~---------~ 54 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAAP-----------------L---------V 54 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCcccc-----------------e---------e
Confidence 899999998743 23789999999999999999999999999764321110 0 0
Q ss_pred eEEEEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchH
Q 010752 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI 242 (502)
Q Consensus 163 ~v~~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~ 242 (502)
.. ........ +.............+.+.++. .++| |||+|.+.....
T Consensus 55 ~~--~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~------------~~~D-ivh~~~~~~~~~ 101 (335)
T cd03802 55 PV--VPEPLRLD------------------APGRDRAEAEALALAERALAA------------GDFD-IVHNHSLHLPLP 101 (335)
T ss_pred ec--cCCCcccc------------------cchhhHhhHHHHHHHHHHHhc------------CCCC-EEEecCcccchh
Confidence 00 00000000 000001111122223333322 2699 999998877665
Q ss_pred HHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCcccc
Q 010752 243 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 322 (502)
Q Consensus 243 ~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 322 (502)
..+. .++|+++++|+..... ...........+.+++
T Consensus 102 --~~~~--------~~~~~v~~~h~~~~~~----------------------------------~~~~~~~~~~~~~~~~ 137 (335)
T cd03802 102 --FARP--------LPVPVVTTLHGPPDPE----------------------------------LLKLYYAARPDVPFVS 137 (335)
T ss_pred --hhcc--------cCCCEEEEecCCCCcc----------------------------------cchHHHhhCcCCeEEE
Confidence 2221 5889999999664310 0001223457889999
Q ss_pred CCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCC
Q 010752 323 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 402 (502)
Q Consensus 323 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~ 402 (502)
+|+..++.+.. . .++.+|+||+|.+.|.+.. .+.
T Consensus 138 ~s~~~~~~~~~---~----------~~~~vi~ngvd~~~~~~~~---------------------------------~~~ 171 (335)
T cd03802 138 ISDAQRRPWPP---L----------PWVATVHNGIDLDDYPFRG---------------------------------PKG 171 (335)
T ss_pred ecHHHHhhccc---c----------cccEEecCCcChhhCCCCC---------------------------------CCC
Confidence 99999887763 1 2789999999998886532 245
Q ss_pred cEEEEEcCcccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHH---CCCceEEEeecChHHHHHHHHhcCE
Q 010752 403 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEIL---YPEKARGVAKFNIPLAHMIIAGADF 479 (502)
Q Consensus 403 p~i~~iGrl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~---~~~~v~~~~~~~~~~~~~ila~ADi 479 (502)
+.|+|+||+.+.||++.+++++.+. +++|+++|.+.. .+.+...... ..+++.+.+..+.+++..+++.+|+
T Consensus 172 ~~i~~~Gr~~~~Kg~~~li~~~~~~---~~~l~i~G~~~~--~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~ 246 (335)
T cd03802 172 DYLLFLGRISPEKGPHLAIRAARRA---GIPLKLAGPVSD--PDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARA 246 (335)
T ss_pred CEEEEEEeeccccCHHHHHHHHHhc---CCeEEEEeCCCC--HHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcE
Confidence 6899999999999999999998764 799999999863 2223332222 3578999999988888899999999
Q ss_pred EEEcCCC-CCCcHHHHHHHHcCCC
Q 010752 480 ILIPSRF-EPCGLIQLHAMRYGTV 502 (502)
Q Consensus 480 ~l~PS~~-E~fglv~lEAma~G~P 502 (502)
+++||.+ |+||++++|||+||+|
T Consensus 247 ~v~ps~~~E~~~~~~lEAma~G~P 270 (335)
T cd03802 247 LLFPILWEEPFGLVMIEAMACGTP 270 (335)
T ss_pred EEeCCcccCCcchHHHHHHhcCCC
Confidence 9999986 9999999999999998
No 25
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=99.96 E-value=4.6e-27 Score=245.06 Aligned_cols=288 Identities=14% Similarity=0.176 Sum_probs=200.6
Q ss_pred eEEEEeeeccC--ccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCce
Q 010752 86 NILFVGTEVAP--WSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (502)
Q Consensus 86 kIl~V~~~~~P--~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (502)
||+|++++-.| .-..||+++++.++++.|+. +|+++|-..+.+++. ....+|+.
T Consensus 4 ~~~~~~~~~~~~p~~~~g~ve~~~~~~~~~l~~---~~~~~~~~~~~~~~~---------------------~~~~~~~~ 59 (380)
T PRK15484 4 KIIFTVTPIFSIPPRGAAAVETWIYQVAKRTSI---PNRIACIKNPGYPEY---------------------TKVNDNCD 59 (380)
T ss_pred eEEEEeccCCCCCCccccHHHHHHHHhhhhccC---CeeEEEecCCCCCch---------------------hhccCCCc
Confidence 78888765443 24689999999999999953 999999877665542 11234566
Q ss_pred EEEEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHH
Q 010752 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 243 (502)
Q Consensus 164 v~~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~ 243 (502)
+..+..+....+..+ +.+. . +...+.+.++..+..... .++| |||+|+.... .
T Consensus 60 ~~~~~~~~~~~~~~~----~~~~------~-----~~~~~~~~~~~~~~~~~~---------~~~~-vi~v~~~~~~--~ 112 (380)
T PRK15484 60 IHYIGFSRIYKRLFQ----KWTR------L-----DPLPYSQRILNIAHKFTI---------TKDS-VIVIHNSMKL--Y 112 (380)
T ss_pred eEEEEeccccchhhh----hhhc------c-----CchhHHHHHHHHHHhcCC---------CCCc-EEEEeCcHHh--H
Confidence 666643332211000 0000 0 011233333333332211 1477 9999984432 2
Q ss_pred HHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccccC
Q 010752 244 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323 (502)
Q Consensus 244 ~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 323 (502)
..++..+ .++|+++++|+... ...+..++.++++
T Consensus 113 ~~~~~~~------~~~~~v~~~h~~~~----------------------------------------~~~~~~~~~ii~~ 146 (380)
T PRK15484 113 RQIRERA------PQAKLVMHMHNAFE----------------------------------------PELLDKNAKIIVP 146 (380)
T ss_pred HHHHhhC------CCCCEEEEEecccC----------------------------------------hhHhccCCEEEEc
Confidence 2233332 67899999995421 0013357999999
Q ss_pred CHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCc
Q 010752 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (502)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p 403 (502)
|++.++.+.+. .+ ..++.+||||+|.+.|.+.. ++++++++|++ ++.+
T Consensus 147 S~~~~~~~~~~----~~------~~~i~vIpngvd~~~~~~~~--------------------~~~~~~~~~~~--~~~~ 194 (380)
T PRK15484 147 SQFLKKFYEER----LP------NADISIVPNGFCLETYQSNP--------------------QPNLRQQLNIS--PDET 194 (380)
T ss_pred CHHHHHHHHhh----CC------CCCEEEecCCCCHHHcCCcc--------------------hHHHHHHhCCC--CCCe
Confidence 99999988741 11 22789999999988776643 23456677765 3567
Q ss_pred EEEEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCCh-------hhHHHHHHHHHHCCCceEEEeecChHHHHHHH
Q 010752 404 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK-------PMEKQLEQLEILYPEKARGVAKFNIPLAHMII 474 (502)
Q Consensus 404 ~i~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~-------~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~il 474 (502)
+|+|+||+.+.||++.+++|++++.+ ++++|+++|++.. .+.+.++++..+++.++.+.+..+.+++..+|
T Consensus 195 ~il~~Grl~~~Kg~~~Li~A~~~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~v~~~G~~~~~~l~~~~ 274 (380)
T PRK15484 195 VLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGGQPPEKMHNYY 274 (380)
T ss_pred EEEEeccCccccCHHHHHHHHHHHHHhCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcCCcEEEeCCCCHHHHHHHH
Confidence 89999999999999999999999865 6899999998742 24556777777778888888888888899999
Q ss_pred HhcCEEEEcCCC-CCCcHHHHHHHHcCCC
Q 010752 475 AGADFILIPSRF-EPCGLIQLHAMRYGTV 502 (502)
Q Consensus 475 a~ADi~l~PS~~-E~fglv~lEAma~G~P 502 (502)
+.||++++||.+ |+||++++|||+||+|
T Consensus 275 ~~aDv~v~pS~~~E~f~~~~lEAma~G~P 303 (380)
T PRK15484 275 PLADLVVVPSQVEEAFCMVAVEAMAAGKP 303 (380)
T ss_pred HhCCEEEeCCCCccccccHHHHHHHcCCC
Confidence 999999999987 9999999999999998
No 26
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.96 E-value=3.4e-27 Score=245.45 Aligned_cols=308 Identities=17% Similarity=0.171 Sum_probs=193.1
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeec-Cce
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKR-GVD 163 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gv~ 163 (502)
|||||+.+.+ ..||.+.++.+|+.+|+++||+|+++|+..+.... +....+ ++.
T Consensus 1 mkIl~~~~~~----~~gG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~---------------------~~~~~~~~~~ 55 (392)
T cd03805 1 LRVAFIHPDL----GIGGAERLVVDAALALQSRGHEVTIYTSHHDPSHC---------------------FEETKDGTLP 55 (392)
T ss_pred CeEEEECCCC----CCchHHHHHHHHHHHHHhCCCeEEEEcCCCCchhc---------------------chhccCCeeE
Confidence 8999998765 46999999999999999999999999975332110 001111 133
Q ss_pred EEEEeCCcccccccCCCCCcccCCCCCCCCcchHHHH-HHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchH
Q 010752 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRF-SLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI 242 (502)
Q Consensus 164 v~~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~-~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~ 242 (502)
+..+..+ ..+ ..+. .......+ ..+...... ..+. ..++| |||+|++..+..
T Consensus 56 i~~~~~~--~~~-------~~~~------~~~~~~~~~~~~~~~~~~--~~~~---------~~~~D-vi~~~~~~~~~~ 108 (392)
T cd03805 56 VRVRGDW--LPR-------SIFG------RFHILCAYLRMLYLALYL--LLLP---------DEKYD-VFIVDQVSACVP 108 (392)
T ss_pred EEEEeEE--Ecc-------hhhH------hHHHHHHHHHHHHHHHHH--Hhcc---------cCCCC-EEEEcCcchHHH
Confidence 3322110 000 0000 00000000 011111110 0111 12699 889987654332
Q ss_pred HHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHH-HHHHHHHhcCccc
Q 010752 243 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN-WMKAGILESDMVL 321 (502)
Q Consensus 243 ~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~-~~k~~~~~ad~vi 321 (502)
.++.. .+.|++++.|...... . ....+. +........ +.+..++.+|.|+
T Consensus 109 --~~~~~-------~~~~~i~~~h~~~~~~--~--------~~~~~~----------~~~~~~~~~~~e~~~~~~ad~ii 159 (392)
T cd03805 109 --LLKLF-------SPSKILFYCHFPDQLL--A--------QRGSLL----------KRLYRKPFDWLEEFTTGMADKIV 159 (392)
T ss_pred --HHHHh-------cCCcEEEEEecChHHh--c--------CCCcHH----------HHHHHHHHHHHHHHHhhCceEEE
Confidence 22321 2489999999432100 0 000000 000001122 2356678899999
Q ss_pred cCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCC
Q 010752 322 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 401 (502)
Q Consensus 322 ~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~ 401 (502)
++|+..++.+.+ .++.. ....+.+|+||+|.+.|.|..... .....+. .++
T Consensus 160 ~~s~~~~~~~~~--~~~~~-----~~~~~~vi~n~vd~~~~~~~~~~~--------------------~~~~~~~--~~~ 210 (392)
T cd03805 160 VNSNFTASVFKK--TFPSL-----AKNPREVVYPCVDTDSFESTSEDP--------------------DPGLLIP--KSG 210 (392)
T ss_pred EcChhHHHHHHH--Hhccc-----ccCCcceeCCCcCHHHcCcccccc--------------------ccccccc--CCC
Confidence 999999998874 12211 111346999999998886643210 0111111 246
Q ss_pred CcEEEEEcCcccccCHHHHHHHHhhccc-----CCeEEEEEeCCCh------hhHHHHHHHHHH-C--CCceEEEeecCh
Q 010752 402 IPVIGFIGRLEEQKGSDILAAAIPHFIK-----ENVQIIVLGTGKK------PMEKQLEQLEIL-Y--PEKARGVAKFNI 467 (502)
Q Consensus 402 ~p~i~~iGrl~~~KG~d~ll~Al~~L~~-----~~v~lvivG~g~~------~~~~~l~~l~~~-~--~~~v~~~~~~~~ 467 (502)
.++|+++||+.+.||++.+++|++++.+ ++++|+++|+++. .+.+.++++.++ + .+++.+.+..+.
T Consensus 211 ~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~ 290 (392)
T cd03805 211 KKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSISD 290 (392)
T ss_pred ceEEEEEeeecccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCCCh
Confidence 7799999999999999999999999865 4899999998864 234667777766 4 367999999998
Q ss_pred HHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 468 ~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
+++..+|+.||++++||..|+||++++|||+||+|
T Consensus 291 ~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~P 325 (392)
T cd03805 291 SQKELLLSSARALLYTPSNEHFGIVPLEAMYAGKP 325 (392)
T ss_pred HHHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCC
Confidence 88899999999999999999999999999999998
No 27
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.95 E-value=9.8e-27 Score=237.93 Aligned_cols=288 Identities=17% Similarity=0.168 Sum_probs=193.3
Q ss_pred eEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceEE
Q 010752 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (502)
Q Consensus 86 kIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 165 (502)
||++++..+ + .||.+.++.+++++|++.||+|+++++....... .. .....|+.++
T Consensus 1 kIl~~~~~~-~---~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~~~~--~~------------------~~~~~~~~~~ 56 (358)
T cd03812 1 KILHIVGTM-N---RGGIETFIMNYYRNLDRSKIQFDFLVTSKEEGDY--DD------------------EIEKLGGKIY 56 (358)
T ss_pred CEEEEeCCC-C---CccHHHHHHHHHHhcCccceEEEEEEeCCCCcch--HH------------------HHHHcCCeEE
Confidence 699999876 3 5999999999999999999999999986432100 00 0112245554
Q ss_pred EEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHHHH
Q 010752 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (502)
Q Consensus 166 ~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~~~ 245 (502)
.+.... . +... +...+.+.++. ++|| |||+|......++..
T Consensus 57 ~~~~~~--~---------------------~~~~---~~~~~~~~~~~------------~~~D-vv~~~~~~~~~~~~~ 97 (358)
T cd03812 57 YIPARK--K---------------------NPLK---YFKKLYKLIKK------------NKYD-IVHVHGSSASGFILL 97 (358)
T ss_pred EecCCC--c---------------------cHHH---HHHHHHHHHhc------------CCCC-EEEEeCcchhHHHHH
Confidence 321110 0 1111 11222222222 2699 899998776555555
Q ss_pred HHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccccCCH
Q 010752 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (502)
Q Consensus 246 lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (502)
+.... ....++++.|+..+...+.. . ......+.+..+..+|.++++|+
T Consensus 98 ~~~~~------~~~~~v~~~~~~~~~~~~~~-------------~------------~~~~~~~~~~~~~~~~~~i~~s~ 146 (358)
T cd03812 98 AAKKA------GVKVRIAHSHNTSDSHDKKK-------------K------------ILKYKVLRKLINRLATDYLACSE 146 (358)
T ss_pred HHhhC------CCCeEEEEeccccccccccc-------------h------------hhHHHHHHHHHHhcCCEEEEcCH
Confidence 44432 23345677776543211000 0 00011223455678999999999
Q ss_pred HHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCcEE
Q 010752 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (502)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p~i 405 (502)
..++.+.+ . . ...++.+||||+|.+.+.+.... ++. +.+.+. ..+.++|
T Consensus 147 ~~~~~~~~--~--~------~~~~~~vi~ngvd~~~~~~~~~~------------------~~~-~~~~~~--~~~~~~i 195 (358)
T cd03812 147 EAGKWLFG--K--V------KNKKFKVIPNGIDLEKFIFNEEI------------------RKK-RRELGI--LEDKFVI 195 (358)
T ss_pred HHHHHHHh--C--C------CcccEEEEeccCcHHHcCCCchh------------------hhH-HHHcCC--CCCCEEE
Confidence 99998874 1 1 22389999999999877654310 111 334443 3477899
Q ss_pred EEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeecChHHHHHHHHhcCEEE
Q 010752 406 GFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFIL 481 (502)
Q Consensus 406 ~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~ila~ADi~l 481 (502)
+|+||+.++||++.+++|+.++.+ ++++++++|+|+ ..+.++++.++++ +++.+.+. .+++..+++.||+++
T Consensus 196 ~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~v 271 (358)
T cd03812 196 GHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGE--LEEEIKKKVKELGLEDKVIFLGV--RNDVPELLQAMDVFL 271 (358)
T ss_pred EEEeccccccChHHHHHHHHHHHHhCCCeEEEEEeCCc--hHHHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhcCEEE
Confidence 999999999999999999999976 599999999987 4556666665543 56777776 455778999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCC
Q 010752 482 IPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 482 ~PS~~E~fglv~lEAma~G~P 502 (502)
+||.+|+||++++|||++|+|
T Consensus 272 ~ps~~E~~~~~~lEAma~G~P 292 (358)
T cd03812 272 FPSLYEGLPLVLIEAQASGLP 292 (358)
T ss_pred ecccccCCCHHHHHHHHhCCC
Confidence 999999999999999999998
No 28
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.95 E-value=2.9e-26 Score=240.83 Aligned_cols=313 Identities=16% Similarity=0.134 Sum_probs=182.9
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v 164 (502)
||||+|...+ ..||+|+++.+|++.|.++||+|.++.-+........ ..+++..
T Consensus 1 mkil~i~~~l----~~GGaeri~~~L~~~l~~~G~~~~i~~~~~~~~~~~~----------------------~~~~~~~ 54 (405)
T PRK10125 1 MNILQFNVRL----AEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESV----------------------SHQNYPQ 54 (405)
T ss_pred CeEEEEEeee----cCCchhHHHHHHHHHHHhcCCeEEEEEecCCCccccc----------------------ccCCcce
Confidence 8999999854 6699999999999999999999999987643221100 0011111
Q ss_pred EEEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHH-HHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHH
Q 010752 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLC-QAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 243 (502)
Q Consensus 165 ~~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~-~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~ 243 (502)
.....+.+...... ..+.+. + +..+.+ .+..+.+.. .++|| |||+|..+.+.+.
T Consensus 55 ~~~~~~~~~~~~~~-~~~~~~---------~---~~~~~~~~~~~~~i~~-----------~~~pD-viHlH~~~~~~~~ 109 (405)
T PRK10125 55 VIKHTPRMTAMANI-ALFRLF---------N---RDLFGNFNELYRTITR-----------TPGPV-VLHFHVLHSYWLN 109 (405)
T ss_pred EEEecccHHHHHHH-HHHHhc---------c---hhhcchHHHHHHHHhh-----------ccCCC-EEEEecccCceec
Confidence 11111111100000 000000 0 000011 112222211 14799 9999988874332
Q ss_pred H--HHHH--hccCCCCcCCCeEEEEEecC-ccccccccccccccCCCccccc-cccc--ccCCCCCc-------ccchHH
Q 010752 244 C--YLKT--MYKPKGMYKSAKVVFCIHNI-AYQGRFAFEDFGLLNLPAQFKS-SFDF--IDGYNKPV-------RGRKIN 308 (502)
Q Consensus 244 ~--~lk~--~~~~~~~~~~~pvv~tiH~~-~~~g~~~~~~~~~l~lp~~~~~-~~~~--~~~~~~~~-------~~~~~~ 308 (502)
. .++- ..+.. -.++|+|+|+|+. .+.|.|.+.+ ....+.. +..+ ...|.... +.++..
T Consensus 110 ~~~l~~~~~~~~~~--~~~~piV~TlHd~~~~tg~c~~~~-----~C~~~~~~c~~Cp~l~~~~~~~~d~~~~~~~~k~~ 182 (405)
T PRK10125 110 LKSVVRFCEKVKNH--KPDVTLVWTLHDHWSVTGRCAFTD-----GCEGWKTGCQKCPTLNNYPPVKVDRAHQLVAGKRQ 182 (405)
T ss_pred HHHHHHHHhhhhcc--cCCCCEEEecccccccCCCcCCCc-----ccccccccCCCCCCccCCCCCccchHHHHHHHHHH
Confidence 2 1110 00000 1578999999985 4556665522 1111111 1111 11111100 111222
Q ss_pred HHHHHHHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHH
Q 010752 309 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 388 (502)
Q Consensus 309 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~ 388 (502)
+++.....++.++++|+++++.+.+ .++ ..++.+|+||+|++.+.+..+. .
T Consensus 183 ~~~~~~~~~~~iV~~S~~l~~~~~~--~~~--------~~~i~vI~NGid~~~~~~~~~~-------------------~ 233 (405)
T PRK10125 183 LFREMLALGCQFISPSQHVADAFNS--LYG--------PGRCRIINNGIDMATEAILAEL-------------------P 233 (405)
T ss_pred HHHHHhhcCcEEEEcCHHHHHHHHH--HcC--------CCCEEEeCCCcCcccccccccc-------------------c
Confidence 2333344578999999999998874 223 2278999999997543322100 0
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCc--ccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeec-
Q 010752 389 ALQAEVGLPVDRNIPVIGFIGRL--EEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF- 465 (502)
Q Consensus 389 ~l~~~~gl~~~~~~p~i~~iGrl--~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~- 465 (502)
. ....++.++|+++|+. .+.||.+.+++|+.++. ++++|+++|.+++.. ..++...+..
T Consensus 234 ~------~~~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~-~~~~L~ivG~g~~~~-----------~~~v~~~g~~~ 295 (405)
T PRK10125 234 P------VRETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG-DKIELHTFGKFSPFT-----------AGNVVNHGFET 295 (405)
T ss_pred c------cccCCCCCEEEEEEeccccCCccHHHHHHHHHhCC-CCeEEEEEcCCCccc-----------ccceEEecCcC
Confidence 0 0012366789999994 36899999999999874 589999999875321 2346655543
Q ss_pred ChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 466 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 466 ~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
+..++..+|+.||++|+||.+|+||++++||||||+|
T Consensus 296 ~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~P 332 (405)
T PRK10125 296 DKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVP 332 (405)
T ss_pred CHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCCC
Confidence 4456778999999999999999999999999999998
No 29
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.95 E-value=1.4e-26 Score=243.49 Aligned_cols=203 Identities=21% Similarity=0.240 Sum_probs=157.1
Q ss_pred CCCEEEEEcCCccchHHHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccch
Q 010752 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (502)
Q Consensus 227 ~pDvVih~h~~~t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~ 306 (502)
++| +||+|.++++.....++... . ...|+++|.|+.+.... . . .. ..
T Consensus 118 ~~d-iihaH~~~~~~~~~~~~~~~----~-~~~~~~~t~Hg~d~~~~---------~---~-------~~--------~~ 164 (406)
T PRK15427 118 VAD-VFIAHFGPAGVTAAKLRELG----V-LRGKIATIFHGIDISSR---------E---V-------LN--------HY 164 (406)
T ss_pred CCC-EEEEcCChHHHHHHHHHHhC----C-CCCCeEEEEcccccccc---------h---h-------hh--------hh
Confidence 699 99999888777776666521 1 24467889996542100 0 0 00 01
Q ss_pred HHHHHHHHHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHH
Q 010752 307 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 386 (502)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~ 386 (502)
..+++..+..+|.++++|+..++.+.+ .|++.+ ++.+|+||+|.+.|.+....
T Consensus 165 ~~~~~~~~~~ad~vv~~S~~~~~~l~~---~g~~~~------ki~vi~nGvd~~~f~~~~~~------------------ 217 (406)
T PRK15427 165 TPEYQQLFRRGDLMLPISDLWAGRLQK---MGCPPE------KIAVSRMGVDMTRFSPRPVK------------------ 217 (406)
T ss_pred hHHHHHHHHhCCEEEECCHHHHHHHHH---cCCCHH------HEEEcCCCCCHHHcCCCccc------------------
Confidence 124455678999999999999999884 466555 88999999999888654210
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEE
Q 010752 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGV 462 (502)
Q Consensus 387 k~~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~ 462 (502)
...+...|+|+||+.++||++.+++|++.+.+ ++++++++|+|+ .++.++++.++++ +++.+.
T Consensus 218 -----------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~--~~~~l~~~~~~~~l~~~V~~~ 284 (406)
T PRK15427 218 -----------APATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGP--WERRLRTLIEQYQLEDVVEMP 284 (406)
T ss_pred -----------cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECch--hHHHHHHHHHHcCCCCeEEEe
Confidence 11244579999999999999999999999976 589999999997 5677888887765 678888
Q ss_pred eecChHHHHHHHHhcCEEEEcCCC------CCCcHHHHHHHHcCCC
Q 010752 463 AKFNIPLAHMIIAGADFILIPSRF------EPCGLIQLHAMRYGTV 502 (502)
Q Consensus 463 ~~~~~~~~~~ila~ADi~l~PS~~------E~fglv~lEAma~G~P 502 (502)
+..+.+++.++|+.||++++||.. |+||++++|||+||+|
T Consensus 285 G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~P 330 (406)
T PRK15427 285 GFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIP 330 (406)
T ss_pred CCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCC
Confidence 888888899999999999999984 9999999999999998
No 30
>PLN00142 sucrose synthase
Probab=99.95 E-value=3.6e-26 Score=251.94 Aligned_cols=251 Identities=18% Similarity=0.144 Sum_probs=158.2
Q ss_pred CCCEEEEEcCCccchHHHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccch
Q 010752 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (502)
Q Consensus 227 ~pDvVih~h~~~t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~ 306 (502)
+|| |||+|.|.+++++..++... ++|.++|.|...-... ..++...-..... |.. . ..
T Consensus 408 ~PD-lIHaHYwdsg~vA~~La~~l-------gVP~v~T~HsL~k~K~-~~~~~~~~~~e~~----------y~~--~-~r 465 (815)
T PLN00142 408 KPD-LIIGNYSDGNLVASLLAHKL-------GVTQCTIAHALEKTKY-PDSDIYWKKFDDK----------YHF--S-CQ 465 (815)
T ss_pred CCC-EEEECCccHHHHHHHHHHHh-------CCCEEEEcccchhhhc-cccCCcccccchh----------hhh--h-hc
Confidence 599 99999999999999999874 9999999997642111 1110000000000 000 0 11
Q ss_pred HHHHHHHHHhcCccccCCHHHHHHH----H---cCCCCCCc-chhhh-----ccccEEEeeCCCcCCCCCCCcccc--cc
Q 010752 307 INWMKAGILESDMVLTVSPHYAQEL----V---SGEDKGVE-LDNII-----RKTGIKGIVNGMDVQEWNPLTDKY--IG 371 (502)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l----~---~~~~~g~~-~~~~~-----~~~~i~vI~NGvd~~~~~p~~~~~--i~ 371 (502)
+......+..||.||+.|......+ . +...+..+ +..++ -..++.+|++|+|...|.|..+.. +.
T Consensus 466 ~~aE~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~ 545 (815)
T PLN00142 466 FTADLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLT 545 (815)
T ss_pred hHHHHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHH
Confidence 2233456789999999998776422 1 10001111 01110 022789999999999998754210 00
Q ss_pred cccCcchhccchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCC-h------
Q 010752 372 VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK-K------ 442 (502)
Q Consensus 372 ~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~-~------ 442 (502)
.-++.. +.+.-..+..++.+|+..+++.|+|+++||+.++||++.+++|+.++.+ ++++|+|+|++. +
T Consensus 546 ~l~n~I---~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ 622 (815)
T PLN00142 546 SLHPSI---EELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDR 622 (815)
T ss_pred hhcccc---hhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccH
Confidence 000000 0000012334457787667788999999999999999999999998754 479999999872 1
Q ss_pred hh---HHHHHHHHHHCC--CceEEEeecC----hHHHHHHHH-hcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 443 PM---EKQLEQLEILYP--EKARGVAKFN----IPLAHMIIA-GADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 443 ~~---~~~l~~l~~~~~--~~v~~~~~~~----~~~~~~ila-~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
+. .+.+++++.+++ +++.+.+... .+.+..+++ ++|++++||.+|+||++++|||+||+|
T Consensus 623 ee~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlP 692 (815)
T PLN00142 623 EEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLP 692 (815)
T ss_pred HHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCC
Confidence 11 134566666665 6677765432 234444555 579999999999999999999999998
No 31
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.95 E-value=6.9e-26 Score=235.02 Aligned_cols=314 Identities=24% Similarity=0.251 Sum_probs=205.5
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v 164 (502)
+++++.+...+| ..||.+.++.+|+.+|+++||+|+|+++......... ....+|+.+
T Consensus 7 ~~~~~~~~~~~~--~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~--------------------~~~~~~~~~ 64 (398)
T cd03800 7 LHGSPLAQPGGA--DTGGQNVYVLELARALARLGHEVDIFTRRIDDALPPI--------------------VELAPGVRV 64 (398)
T ss_pred ccccccccCCCC--CCCceeehHHHHHHHHhccCceEEEEEecCCcccCCc--------------------cccccceEE
Confidence 344444433334 5799999999999999999999999987543221100 112245666
Q ss_pred EEEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHHH
Q 010752 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (502)
Q Consensus 165 ~~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~~ 244 (502)
+.++..... +.. ..........+...+...++... .+|| +||+|.+.++..+.
T Consensus 65 ~~~~~~~~~-----------~~~-----~~~~~~~~~~~~~~~~~~~~~~~----------~~~D-iv~~~~~~~~~~~~ 117 (398)
T cd03800 65 VRVPAGPAE-----------YLP-----KEELWPYLDEFADDLLRFLRREG----------GRPD-LIHAHYWDSGLVAL 117 (398)
T ss_pred Eeccccccc-----------CCC-----hhhcchhHHHHHHHHHHHHHhcC----------CCcc-EEEEecCccchHHH
Confidence 655321110 000 00000111123334444443321 1599 89999988887777
Q ss_pred HHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccccCC
Q 010752 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (502)
Q Consensus 245 ~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 324 (502)
.++.. .++|++++.|+........ .. .... +.........+..++.+|.++++|
T Consensus 118 ~~~~~-------~~~~~i~~~h~~~~~~~~~------~~-~~~~------------~~~~~~~~~~~~~~~~ad~ii~~s 171 (398)
T cd03800 118 LLARR-------LGIPLVHTFHSLGAVKRRH------LG-AADT------------YEPARRIEAEERLLRAADRVIAST 171 (398)
T ss_pred HHHhh-------cCCceEEEeecccccCCcc------cc-cccc------------cchhhhhhHHHHHHhhCCEEEEcC
Confidence 66654 4899999999654211000 00 0000 000012233456678999999999
Q ss_pred HHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCcE
Q 010752 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (502)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p~ 404 (502)
+..++.+.+ .++... .++.+|+||+|.+.|.+..+. ...+.+.+.+ .+.++
T Consensus 172 ~~~~~~~~~--~~~~~~------~~~~vi~ng~~~~~~~~~~~~-------------------~~~~~~~~~~--~~~~~ 222 (398)
T cd03800 172 PQEAEELYS--LYGAYP------RRIRVVPPGVDLERFTPYGRA-------------------EARRARLLRD--PDKPR 222 (398)
T ss_pred HHHHHHHHH--Hccccc------cccEEECCCCCccceecccch-------------------hhHHHhhccC--CCCcE
Confidence 999888874 222222 258999999999888665321 0113333333 46789
Q ss_pred EEEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCChh----hHHHHHHHHHHCC--CceEEEeecChHHHHHHHHh
Q 010752 405 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKP----MEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAG 476 (502)
Q Consensus 405 i~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~----~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~ila~ 476 (502)
|+|+||+.+.||++.+++|+.++.+ ++++|+++|++... ....++++.+.++ +++.+.+..+.+++..+++.
T Consensus 223 i~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ 302 (398)
T cd03800 223 ILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRA 302 (398)
T ss_pred EEEEcccccccCHHHHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHh
Confidence 9999999999999999999999975 58999999987532 2334566666554 57888888888889999999
Q ss_pred cCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 477 ADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 477 ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
||++++||.+|+||++++|||+||+|
T Consensus 303 adi~l~ps~~e~~~~~l~Ea~a~G~P 328 (398)
T cd03800 303 ADVFVNPALYEPFGLTALEAMACGLP 328 (398)
T ss_pred CCEEEecccccccCcHHHHHHhcCCC
Confidence 99999999999999999999999998
No 32
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.95 E-value=1.9e-25 Score=228.65 Aligned_cols=290 Identities=19% Similarity=0.192 Sum_probs=189.1
Q ss_pred eEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceEE
Q 010752 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (502)
Q Consensus 86 kIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 165 (502)
||++|+.+++|. ..||.+.++.+|+++|+++||+|.|+++....... ....+|++++
T Consensus 1 ~i~~i~~~~~~~-~~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~~~~----------------------~~~~~~i~~~ 57 (363)
T cd04955 1 KIAIIGTRGIPA-KYGGFETFVEELAPRLVARGHEVTVYCRSPYPKQK----------------------ETEYNGVRLI 57 (363)
T ss_pred CeEEEecCcCCc-ccCcHHHHHHHHHHHHHhcCCCEEEEEccCCCCCc----------------------ccccCCceEE
Confidence 699998876653 78999999999999999999999999975332211 1123577777
Q ss_pred EEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHHHH
Q 010752 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (502)
Q Consensus 166 ~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~~~ 245 (502)
.++.+.. . ...++..-...+....+. . .++| ++|.....+.++...
T Consensus 58 ~~~~~~~--~--------------------~~~~~~~~~~~~~~~~~~-~----------~~~~-~i~~~~~~~~~~~~~ 103 (363)
T cd04955 58 HIPAPEI--G--------------------GLGTIIYDILAILHALFV-K----------RDID-HVHALGPAIAPFLPL 103 (363)
T ss_pred EcCCCCc--c--------------------chhhhHHHHHHHHHHHhc-c----------CCeE-EEEecCccHHHHHHH
Confidence 6543210 0 000000011111111111 0 1344 444443333222222
Q ss_pred HHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHH-HHHHHHhcCccccCC
Q 010752 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINW-MKAGILESDMVLTVS 324 (502)
Q Consensus 246 lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~-~k~~~~~ad~vi~vS 324 (502)
++. .+.|+++++|+..+... ..+. + ......+ .+..+..+|.++++|
T Consensus 104 ~~~--------~~~~~v~~~h~~~~~~~---------~~~~--------------~-~~~~~~~~~~~~~~~ad~ii~~s 151 (363)
T cd04955 104 LRL--------KGKKVVVNMDGLEWKRA---------KWGR--------------P-AKRYLKFGEKLAVKFADRLIADS 151 (363)
T ss_pred HHh--------cCCCEEEEccCcceeec---------cccc--------------c-hhHHHHHHHHHHHhhccEEEeCC
Confidence 222 47899999997643110 0000 0 0012222 255678899999999
Q ss_pred HHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCcE
Q 010752 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (502)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p~ 404 (502)
+..++.+.. .+|.. . .+|+||+|...+.+. .+..++.+++ +.+.
T Consensus 152 ~~~~~~~~~--~~~~~--------~-~~i~ngv~~~~~~~~----------------------~~~~~~~~~~---~~~~ 195 (363)
T cd04955 152 PGIKEYLKE--KYGRD--------S-TYIPYGADHVVSSEE----------------------DEILKKYGLE---PGRY 195 (363)
T ss_pred HHHHHHHHH--hcCCC--------C-eeeCCCcChhhcchh----------------------hhhHHhcCCC---CCcE
Confidence 999999863 24422 2 899999998765431 1223444443 3457
Q ss_pred EEEEcCcccccCHHHHHHHHhhcccCCeEEEEEeCCCh--hhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCEEEE
Q 010752 405 IGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK--PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (502)
Q Consensus 405 i~~iGrl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~--~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi~l~ 482 (502)
++|+||+.+.||++.+++|+.++.. +++|+++|+++. .+.+.+++ .....+++.+.+..+.+++..+++.||++++
T Consensus 196 i~~~G~~~~~Kg~~~li~a~~~l~~-~~~l~ivG~~~~~~~~~~~~~~-~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ 273 (363)
T cd04955 196 YLLVGRIVPENNIDDLIEAFSKSNS-GKKLVIVGNADHNTPYGKLLKE-KAAADPRIIFVGPIYDQELLELLRYAALFYL 273 (363)
T ss_pred EEEEecccccCCHHHHHHHHHhhcc-CceEEEEcCCCCcchHHHHHHH-HhCCCCcEEEccccChHHHHHHHHhCCEEEe
Confidence 8899999999999999999999865 899999999852 23333332 1233467999999888888899999999999
Q ss_pred cCCC-CCCcHHHHHHHHcCCC
Q 010752 483 PSRF-EPCGLIQLHAMRYGTV 502 (502)
Q Consensus 483 PS~~-E~fglv~lEAma~G~P 502 (502)
||.. |+||++++|||+||+|
T Consensus 274 ps~~~e~~~~~~~EAma~G~P 294 (363)
T cd04955 274 HGHSVGGTNPSLLEAMAYGCP 294 (363)
T ss_pred CCccCCCCChHHHHHHHcCCC
Confidence 9999 9999999999999998
No 33
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.95 E-value=1.3e-25 Score=229.30 Aligned_cols=276 Identities=22% Similarity=0.230 Sum_probs=190.8
Q ss_pred ccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceEEEEeCCcccccccC
Q 010752 99 KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWG 178 (502)
Q Consensus 99 ~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~i~~p~~~~~~~~ 178 (502)
..||.+.++.+|+++|+++||+|.++++.... ... ....|++++.+.... .
T Consensus 8 ~~gG~e~~~~~l~~~L~~~g~~v~v~~~~~~~-~~~----------------------~~~~~~~~~~~~~~~--~---- 58 (355)
T cd03819 8 ESGGVERGTLELARALVERGHRSLVASAGGRL-VAE----------------------LEAEGSRHIKLPFIS--K---- 58 (355)
T ss_pred ccCcHHHHHHHHHHHHHHcCCEEEEEcCCCch-HHH----------------------HHhcCCeEEEccccc--c----
Confidence 45999999999999999999999999864211 110 011244443321100 0
Q ss_pred CCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHHHHHHHhccCCCCcCC
Q 010752 179 KTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKS 258 (502)
Q Consensus 179 ~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~~~lk~~~~~~~~~~~ 258 (502)
+..........+...++. .+|| +||+|....++...++... .+
T Consensus 59 -----------------~~~~~~~~~~~l~~~~~~------------~~~d-ii~~~~~~~~~~~~~~~~~-------~~ 101 (355)
T cd03819 59 -----------------NPLRILLNVARLRRLIRE------------EKVD-IVHARSRAPAWSAYLAARR-------TR 101 (355)
T ss_pred -----------------chhhhHHHHHHHHHHHHH------------cCCC-EEEECCCchhHHHHHHHHh-------cC
Confidence 000111111222223322 2699 8999987666555544433 47
Q ss_pred CeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccccCCHHHHHHHHcCCCCC
Q 010752 259 AKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKG 338 (502)
Q Consensus 259 ~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g 338 (502)
+|+++++|+.... ..+.+..+..+|.++++|+..++.+.+ .++
T Consensus 102 ~~~i~~~h~~~~~-----------------------------------~~~~~~~~~~~~~vi~~s~~~~~~~~~--~~~ 144 (355)
T cd03819 102 PPFVTTVHGFYSV-----------------------------------NFRYNAIMARGDRVIAVSNFIADHIRE--NYG 144 (355)
T ss_pred CCEEEEeCCchhh-----------------------------------HHHHHHHHHhcCEEEEeCHHHHHHHHH--hcC
Confidence 9999999955320 003344467899999999999999883 456
Q ss_pred CcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHH
Q 010752 339 VELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSD 418 (502)
Q Consensus 339 ~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d 418 (502)
++.+ ++.+|+||+|...|.+.... ......++++++.+ ++.++|+|+||+.++||++
T Consensus 145 ~~~~------k~~~i~ngi~~~~~~~~~~~---------------~~~~~~~~~~~~~~--~~~~~i~~~Gr~~~~Kg~~ 201 (355)
T cd03819 145 VDPD------RIRVIPRGVDLDRFDPGAVP---------------PERILALAREWPLP--KGKPVILLPGRLTRWKGQE 201 (355)
T ss_pred CChh------hEEEecCCccccccCccccc---------------hHHHHHHHHHcCCC--CCceEEEEeeccccccCHH
Confidence 5544 88999999999888654311 11122356676654 4677999999999999999
Q ss_pred HHHHHHhhccc--CCeEEEEEeCCCh--hhHHHHHHHHHHCC--CceEEEeecChHHHHHHHHhcCEEEEcC-CCCCCcH
Q 010752 419 ILAAAIPHFIK--ENVQIIVLGTGKK--PMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFILIPS-RFEPCGL 491 (502)
Q Consensus 419 ~ll~Al~~L~~--~~v~lvivG~g~~--~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~ila~ADi~l~PS-~~E~fgl 491 (502)
.+++++.++.+ ++++++++|.++. .+.+.++++..+++ +++.+.+. .+++..+|+.||++++|| .+|++|+
T Consensus 202 ~li~~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~l~~ad~~i~ps~~~e~~~~ 279 (355)
T cd03819 202 VFIEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGH--CSDMPAAYALADIVVSASTEPEAFGR 279 (355)
T ss_pred HHHHHHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCC--cccHHHHHHhCCEEEecCCCCCCCch
Confidence 99999999987 6899999998864 23344555555543 56777766 456778999999999999 7899999
Q ss_pred HHHHHHHcCCC
Q 010752 492 IQLHAMRYGTV 502 (502)
Q Consensus 492 v~lEAma~G~P 502 (502)
+++|||+||+|
T Consensus 280 ~l~EA~a~G~P 290 (355)
T cd03819 280 TAVEAQAMGRP 290 (355)
T ss_pred HHHHHHhcCCC
Confidence 99999999998
No 34
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.95 E-value=5.4e-26 Score=234.98 Aligned_cols=275 Identities=16% Similarity=0.215 Sum_probs=182.3
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHC--CCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCc
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN--GHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~--Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (502)
|||+|++..+.. .||.+.++.+++++|.++ ||+|.++++....... |... ..+. . .+
T Consensus 1 mkI~~~~~~~~~---~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~~~~-~~~~-------------~~~~-~---~~ 59 (359)
T PRK09922 1 MKIAFIGEAVSG---FGGMETVISNVINTFEESKINCEMFFFCRNDKMDKA-WLKE-------------IKYA-Q---SF 59 (359)
T ss_pred CeeEEecccccC---CCchhHHHHHHHHHhhhcCcceeEEEEecCCCCChH-HHHh-------------cchh-c---cc
Confidence 899999875433 599999999999999999 8999999875432111 1000 0000 0 00
Q ss_pred eEEEEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchH
Q 010752 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI 242 (502)
Q Consensus 163 ~v~~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~ 242 (502)
+...+ + + ..... ....+.+.++. ++|| |||+|+..+..+
T Consensus 60 ~~~~~--~-~---------------------~~~~~----~~~~l~~~l~~------------~~~D-ii~~~~~~~~~~ 98 (359)
T PRK09922 60 SNIKL--S-F---------------------LRRAK----HVYNFSKWLKE------------TQPD-IVICIDVISCLY 98 (359)
T ss_pred ccchh--h-h---------------------hcccH----HHHHHHHHHHh------------cCCC-EEEEcCHHHHHH
Confidence 00000 0 0 00000 11122233332 2699 899997665555
Q ss_pred HHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCcccc
Q 010752 243 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 322 (502)
Q Consensus 243 ~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 322 (502)
...+++... ...+++.+.|.... . . ....+ ..+..+|.+++
T Consensus 99 ~~~~~~~~~-----~~~~~~~~~h~~~~-~--------------~-----------------~~~~~--~~~~~~d~~i~ 139 (359)
T PRK09922 99 ANKARKKSG-----KQFKIFSWPHFSLD-H--------------K-----------------KHAEC--KKITCADYHLA 139 (359)
T ss_pred HHHHHHHhC-----CCCeEEEEecCccc-c--------------c-----------------chhhh--hhhhcCCEEEE
Confidence 555554321 23456666663210 0 0 00001 11357999999
Q ss_pred CCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCC
Q 010752 323 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 402 (502)
Q Consensus 323 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~ 402 (502)
+|+..++.+.. +|++.+ ++.+|+||+|.+.+.... +...+.
T Consensus 140 ~S~~~~~~~~~---~~~~~~------ki~vi~N~id~~~~~~~~------------------------------~~~~~~ 180 (359)
T PRK09922 140 ISSGIKEQMMA---RGISAQ------RISVIYNPVEIKTIIIPP------------------------------PERDKP 180 (359)
T ss_pred cCHHHHHHHHH---cCCCHH------HEEEEcCCCCHHHccCCC------------------------------cccCCC
Confidence 99999999884 455554 789999999976543211 011246
Q ss_pred cEEEEEcCcc--cccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeecCh--HHHHHHHHh
Q 010752 403 PVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNI--PLAHMIIAG 476 (502)
Q Consensus 403 p~i~~iGrl~--~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~--~~~~~ila~ 476 (502)
++|+|+||+. ++||++.+++|++++.+ +++|+++|+|+ .++.++++.++++ +++.+.+..+. +.+..+|+.
T Consensus 181 ~~i~~~Grl~~~~~k~~~~l~~a~~~~~~-~~~l~ivG~g~--~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~ 257 (359)
T PRK09922 181 AVFLYVGRLKFEGQKNVKELFDGLSQTTG-EWQLHIIGDGS--DFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKN 257 (359)
T ss_pred cEEEEEEEEecccCcCHHHHHHHHHhhCC-CeEEEEEeCCc--cHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhc
Confidence 7899999996 56999999999998843 89999999997 4567777777654 67888886543 677789999
Q ss_pred cCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 477 ADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 477 ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
+|++++||.+|+||++++|||+||+|
T Consensus 258 ~d~~v~~s~~Egf~~~~lEAma~G~P 283 (359)
T PRK09922 258 VSALLLTSKFEGFPMTLLEAMSYGIP 283 (359)
T ss_pred CcEEEECCcccCcChHHHHHHHcCCC
Confidence 99999999999999999999999998
No 35
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.94 E-value=1.6e-25 Score=232.21 Aligned_cols=289 Identities=17% Similarity=0.146 Sum_probs=184.5
Q ss_pred eEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceEE
Q 010752 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (502)
Q Consensus 86 kIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 165 (502)
||++++..+ ..||++.++.+++.+|.+.||+|+++++...... ++.. +.. +....|.+.
T Consensus 1 ki~~~~~~~----~~GGv~~~~~~l~~~l~~~g~~v~~~~~~~~~~~--~~~~-----------~~~---~~~~~g~~~- 59 (372)
T cd03792 1 KVLHVNSTP----YGGGVAEILHSLVPLMRDLGVDTRWEVIKGDPEF--FNVT-----------KKF---HNALQGADI- 59 (372)
T ss_pred CeEEEeCCC----CCCcHHHHHHHHHHHHHHcCCCceEEecCCChhH--HHHH-----------HHh---hHhhcCCCC-
Confidence 699998864 3599999999999999999999999987532110 0000 000 000001111
Q ss_pred EEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhh-hhcccCCCCCCCCCCCCEEEEEcCCccchHHH
Q 010752 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPR-ILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (502)
Q Consensus 166 ~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~-~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~~ 244 (502)
+ .... .+. .+......... .+. ..+|| |||+|++....++.
T Consensus 60 -------------------~-------~~~~-~~~-~~~~~~~~~~~~~~~---------~~~~D-vv~~h~~~~~~~~~ 101 (372)
T cd03792 60 -------------------E-------LSEE-EKE-IYLEWNEENAERPLL---------DLDAD-VVVIHDPQPLALPL 101 (372)
T ss_pred -------------------C-------CCHH-HHH-HHHHHHHHHhccccc---------cCCCC-EEEECCCCchhHHH
Confidence 0 1111 111 11111111111 111 12699 99999887544333
Q ss_pred HHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccccCC
Q 010752 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (502)
Q Consensus 245 ~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 324 (502)
..+. .++|++++.|+..... . .....+++..+..+|.++++|
T Consensus 102 ~~~~--------~~~~~i~~~H~~~~~~---------------~---------------~~~~~~~~~~~~~~d~~i~~~ 143 (372)
T cd03792 102 FKKK--------RGRPWIWRCHIDLSSP---------------N---------------RRVWDFLQPYIEDYDAAVFHL 143 (372)
T ss_pred hhhc--------CCCeEEEEeeeecCCC---------------c---------------HHHHHHHHHHHHhCCEEeecH
Confidence 2221 3789999999543100 0 022345566678899999888
Q ss_pred HHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCcE
Q 010752 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (502)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p~ 404 (502)
..+.. .++.. .++ +||||+|........ ++ +..++.+++++|++ ++.++
T Consensus 144 ~~~~~-------~~~~~------~~~-vipngvd~~~~~~~~-------~~--------~~~~~~~~~~~~~~--~~~~~ 192 (372)
T cd03792 144 PEYVP-------PQVPP------RKV-IIPPSIDPLSGKNRE-------LS--------PADIEYILEKYGID--PERPY 192 (372)
T ss_pred HHhcC-------CCCCC------ceE-EeCCCCCCCccccCC-------CC--------HHHHHHHHHHhCCC--CCCcE
Confidence 43221 12222 144 999999975311100 11 12245667778875 47789
Q ss_pred EEEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCCh---hhHHHHHHHHHH--CCCceEEEeec--ChHHHHHHHH
Q 010752 405 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK---PMEKQLEQLEIL--YPEKARGVAKF--NIPLAHMIIA 475 (502)
Q Consensus 405 i~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~---~~~~~l~~l~~~--~~~~v~~~~~~--~~~~~~~ila 475 (502)
|+++||+.++||++.+++|++++.+ ++++|+++|.|+. ...+.++++.+. ..+++.+.+.. +.+++..+|+
T Consensus 193 i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 272 (372)
T cd03792 193 ITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQR 272 (372)
T ss_pred EEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHH
Confidence 9999999999999999999998865 5899999999853 233445555533 33567777765 6778889999
Q ss_pred hcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 476 GADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 476 ~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
.||++++||.+|+||++++|||+||+|
T Consensus 273 ~ad~~v~~s~~Eg~g~~~lEA~a~G~P 299 (372)
T cd03792 273 ASTVVLQKSIREGFGLTVTEALWKGKP 299 (372)
T ss_pred hCeEEEeCCCccCCCHHHHHHHHcCCC
Confidence 999999999999999999999999998
No 36
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.94 E-value=5.4e-26 Score=240.86 Aligned_cols=293 Identities=20% Similarity=0.247 Sum_probs=176.7
Q ss_pred EEEeeeccCccccccHHHHHhhhHHHHHHC-CCeEEEEEecCCC--CccccCCceEE-EEE-----eCCeeeEEEEEEEe
Q 010752 88 LFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAPRYDQ--YKDAWDTDVVI-ELK-----VGDKIEKVRFFHCH 158 (502)
Q Consensus 88 l~V~~~~~P~~~~GG~~~~v~~La~aLa~~-Gh~V~vitp~~~~--~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~ 158 (502)
--+++|+.. +.||+-.|+..=|+.+.+. |-++.++.|.... ..+..+..... .+. ....--.+++.++.
T Consensus 5 fE~swEV~N--KVGGIyTVi~tka~~~~~~~~d~y~~iGP~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~g~~v~~GrW~ 82 (590)
T cd03793 5 FEVAWEVAN--KVGGIYTVIKSKAPVTVEEWGDRYCLIGPYNEAKARTEVEILEPPNPALRQALDRMRSRGIKVHFGRWL 82 (590)
T ss_pred EEEeehhhc--cCCCeeeeeecCcHHHHHHhCCeEEEECCCCccccCCccccCCCCchHHHHHHHHHHhCCCeEEEeEEE
Confidence 346777777 8999999999988777755 9999999887542 11111111000 000 00111246667777
Q ss_pred ecCceEEE-EeCC-------cccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHH-HhhhhhcccCCCCCCCCCCCC
Q 010752 159 KRGVDRVF-VDHP-------WFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAAL-EAPRILNLNSNKYFSGPYGED 229 (502)
Q Consensus 159 ~~gv~v~~-i~~p-------~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~-~~~~~l~~~~~~~~~~~~~pD 229 (502)
.+|.+.+. +|.. .+...+|-..+ +-++..++||.+... |...+...+ +..+.+.. .++|
T Consensus 83 i~G~P~viL~D~~~~~~~~~~~~~~lW~~~~--i~s~~~~~d~nea~~-fgy~~~~~i~~~~~~~~~---------~~~d 150 (590)
T cd03793 83 IEGYPKVVLFDIGSAAWKLDEWKGELWELCG--IGSPEGDRETNDAII-FGFLVAWFLGEFAEQFDD---------EPAV 150 (590)
T ss_pred cCCCCeEEEEeCchhhhhHHHHHHHHHHHcC--CCCCCCCCcchHHHH-HHHHHHHHHHHHHhhccC---------CCCe
Confidence 88877664 4442 33445664433 334445556655432 333332222 22222111 2588
Q ss_pred EEEEEcCCccchHHHHHHHhccCCCCcCCCeEEEEEecCcccccc-ccccccccCCCcccccccccccCCCCCc---ccc
Q 010752 230 VVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRF-AFEDFGLLNLPAQFKSSFDFIDGYNKPV---RGR 305 (502)
Q Consensus 230 vVih~h~~~t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~-~~~~~~~l~lp~~~~~~~~~~~~~~~~~---~~~ 305 (502)
|+|+|+|+++..+.++|... ..+|+|||+|.+.. |+. ..+. ..++..+...++....- ...
T Consensus 151 -ViH~HeWm~g~a~~~lK~~~------~~VptVfTtHAT~~-GR~l~~g~-------~~~y~~l~~~~~d~eA~~~~I~~ 215 (590)
T cd03793 151 -VAHFHEWQAGVGLPLLRKRK------VDVSTIFTTHATLL-GRYLCAGN-------VDFYNNLDYFDVDKEAGKRGIYH 215 (590)
T ss_pred -EEEEcchhHhHHHHHHHHhC------CCCCEEEEeccccc-ccccccCC-------cccchhhhhcchhhhhhcccchH
Confidence 99999999999999999643 68999999998875 653 1111 11111111111100000 012
Q ss_pred hHHHHHHHHHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchh-ccchH
Q 010752 306 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV-MDAKP 384 (502)
Q Consensus 306 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~-~~~k~ 384 (502)
....++.....||++++||+.+++++.. .++.+++ + |||||+|+..|.+..+. +.+ ..+|.
T Consensus 216 r~~iE~~aa~~Ad~fttVS~it~~E~~~--Ll~~~pd------~--ViPNGid~~~f~~~~e~--------~~~~~~~k~ 277 (590)
T cd03793 216 RYCIERAAAHCAHVFTTVSEITAYEAEH--LLKRKPD------V--VLPNGLNVKKFSALHEF--------QNLHAQSKE 277 (590)
T ss_pred HHHHHHHHHhhCCEEEECChHHHHHHHH--HhCCCCC------E--EeCCCcchhhcccchhh--------hhhhHHhhh
Confidence 3335577888999999999999999995 6777776 3 99999999998765320 011 01222
Q ss_pred HHHH----HHHHHhCCCCCCCCcEEEE-EcCccc-ccCHHHHHHHHhhccc
Q 010752 385 LLKE----ALQAEVGLPVDRNIPVIGF-IGRLEE-QKGSDILAAAIPHFIK 429 (502)
Q Consensus 385 ~~k~----~l~~~~gl~~~~~~p~i~~-iGrl~~-~KG~d~ll~Al~~L~~ 429 (502)
.+-+ .++..+++ +++.++++| +||+++ +||+|.+|+|+++|..
T Consensus 278 ki~~f~~~~~~~~~~~--~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~ 326 (590)
T cd03793 278 KINEFVRGHFYGHYDF--DLDKTLYFFTAGRYEFSNKGADMFLEALARLNY 326 (590)
T ss_pred hhhHHHHHHHhhhcCC--CCCCeEEEEEeeccccccCCHHHHHHHHHHHHH
Confidence 2222 23445554 457778888 699998 9999999999999865
No 37
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.94 E-value=2e-25 Score=226.46 Aligned_cols=301 Identities=21% Similarity=0.220 Sum_probs=194.4
Q ss_pred eEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceEE
Q 010752 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (502)
Q Consensus 86 kIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 165 (502)
||++|+..++| ..||.+.++.+|+++|++.||+|+++++............ .++..
T Consensus 1 kIl~i~~~~~~--~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~----------------------~~~~~ 56 (375)
T cd03821 1 KILHVIPSFDP--KYGGPVRVVLNLSKALAKLGHEVTVATTDAGGDPLLVALN----------------------GVPVK 56 (375)
T ss_pred CeEEEcCCCCc--ccCCeehHHHHHHHHHHhcCCcEEEEecCCCCccchhhcc----------------------Cceee
Confidence 69999999887 6899999999999999999999999997643322210000 00000
Q ss_pred EEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccc-h-HH
Q 010752 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS-L-IP 243 (502)
Q Consensus 166 ~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~-~-~~ 243 (502)
..... ... ......+ .+........... . .++| +||+|+.... . ..
T Consensus 57 ~~~~~--~~~------------------~~~~~~~-~~~~~~~~~~~~~-~---------~~~d-ii~~~~~~~~~~~~~ 104 (375)
T cd03821 57 LFSIN--VAY------------------GLNLARY-LFPPSLLAWLRLN-I---------READ-IVHVHGLWSYPSLAA 104 (375)
T ss_pred ecccc--hhh------------------hhhhhhh-ccChhHHHHHHHh-C---------CCCC-EEEEecccchHHHHH
Confidence 00000 000 0000000 0001111111111 1 1599 8999973332 2 22
Q ss_pred HHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccccC
Q 010752 244 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323 (502)
Q Consensus 244 ~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 323 (502)
..+.+. .++|++++.|+....... +.. ...+. -......+..+..+|.++++
T Consensus 105 ~~~~~~-------~~~~~i~~~~~~~~~~~~----------~~~---------~~~~~--~~~~~~~~~~~~~~~~i~~~ 156 (375)
T cd03821 105 ARAARK-------YGIPYVVSPHGMLDPWAL----------PHK---------ALKKR--LAWFLFERRLLQAAAAVHAT 156 (375)
T ss_pred HHHHHH-------hCCCEEEEcccccccccc----------ccc---------hhhhH--HHHHHHHHHHHhcCCEEEEC
Confidence 222221 578999999965321100 000 00000 01112235556789999999
Q ss_pred CHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCc
Q 010752 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (502)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p 403 (502)
|......... + ....++.++|||+|.+.+.+.... ..+...+. ..+.+
T Consensus 157 s~~~~~~~~~----~------~~~~~~~vi~~~~~~~~~~~~~~~--------------------~~~~~~~~--~~~~~ 204 (375)
T cd03821 157 SEQEAAEIRR----L------GLKAPIAVIPNGVDIPPFAALPSR--------------------GRRRKFPI--LPDKR 204 (375)
T ss_pred CHHHHHHHHh----h------CCcccEEEcCCCcChhccCcchhh--------------------hhhhhccC--CCCCc
Confidence 9887776663 1 112378999999999888664310 11344333 35778
Q ss_pred EEEEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeecChHHHHHHHHhcCE
Q 010752 404 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADF 479 (502)
Q Consensus 404 ~i~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~ila~ADi 479 (502)
+|+|+||+.+.||++.+++|+.++.+ ++++|+++|.+.....+.++.+..+++ +++.+.+..+.+++..+|+.||+
T Consensus 205 ~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv 284 (375)
T cd03821 205 IILFLGRLHPKKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADL 284 (375)
T ss_pred EEEEEeCcchhcCHHHHHHHHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhCCE
Confidence 99999999999999999999999987 699999999987656666666645443 67888888888888899999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCC
Q 010752 480 ILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 480 ~l~PS~~E~fglv~lEAma~G~P 502 (502)
+++||.+|+||++++|||+||+|
T Consensus 285 ~v~ps~~e~~~~~~~Eama~G~P 307 (375)
T cd03821 285 FVLPSHSENFGIVVAEALACGTP 307 (375)
T ss_pred EEeccccCCCCcHHHHHHhcCCC
Confidence 99999999999999999999998
No 38
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.94 E-value=3.7e-25 Score=226.00 Aligned_cols=283 Identities=20% Similarity=0.243 Sum_probs=195.7
Q ss_pred eEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceEE
Q 010752 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (502)
Q Consensus 86 kIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 165 (502)
||+++++.+ ..||.+.++.+|+++|.++||+|++++........... .+....
T Consensus 1 ~il~~~~~~----~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~-----------------------~~~~~~ 53 (360)
T cd04951 1 KILYVITGL----GLGGAEKQVVDLADQFVAKGHQVAIISLTGESEVKPPI-----------------------DATIIL 53 (360)
T ss_pred CeEEEecCC----CCCCHHHHHHHHHHhcccCCceEEEEEEeCCCCccchh-----------------------hccceE
Confidence 588888764 46999999999999999999999999864322111000 000000
Q ss_pred EEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHHHH
Q 010752 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (502)
Q Consensus 166 ~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~~~ 245 (502)
.+... + ....+......+.++++. ++|| |||+|..++.++..+
T Consensus 54 ~~~~~----~--------------------~~~~~~~~~~~~~~~~~~------------~~pd-iv~~~~~~~~~~~~l 96 (360)
T cd04951 54 NLNMS----K--------------------NPLSFLLALWKLRKILRQ------------FKPD-VVHAHMFHANIFARL 96 (360)
T ss_pred Eeccc----c--------------------cchhhHHHHHHHHHHHHh------------cCCC-EEEEcccchHHHHHH
Confidence 11000 0 000111111223333333 2699 999998887776666
Q ss_pred HHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHH-HHHHHhcCccccCC
Q 010752 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWM-KAGILESDMVLTVS 324 (502)
Q Consensus 246 lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~-k~~~~~ad~vi~vS 324 (502)
++... ...|++++.|+....+ +...++ +.....++.++++|
T Consensus 97 ~~~~~------~~~~~v~~~h~~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~s 138 (360)
T cd04951 97 LRLFL------PSPPLICTAHSKNEGG--------------------------------RLRMLAYRLTDFLSDLTTNVS 138 (360)
T ss_pred HHhhC------CCCcEEEEeeccCchh--------------------------------HHHHHHHHHHhhccCceEEEc
Confidence 66543 6789999999654211 111122 33344688899999
Q ss_pred HHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCcE
Q 010752 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (502)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p~ 404 (502)
+...+.+.+ ..+++. .++.+||||+|...|.+.. ..+..++++++++ ++.++
T Consensus 139 ~~~~~~~~~--~~~~~~------~~~~~i~ng~~~~~~~~~~------------------~~~~~~~~~~~~~--~~~~~ 190 (360)
T cd04951 139 KEALDYFIA--SKAFNA------NKSFVVYNGIDTDRFRKDP------------------ARRLKIRNALGVK--NDTFV 190 (360)
T ss_pred HHHHHHHHh--ccCCCc------ccEEEEccccchhhcCcch------------------HHHHHHHHHcCcC--CCCEE
Confidence 999998874 122333 3789999999988776542 1244567777764 46789
Q ss_pred EEEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeecChHHHHHHHHhcCEE
Q 010752 405 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFI 480 (502)
Q Consensus 405 i~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~ila~ADi~ 480 (502)
++++||+.+.||++.+++|+.++.+ ++++|+++|+|+ ..+.+++..++++ +++.+.+. .+++..+|+.||++
T Consensus 191 ~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~~ 266 (360)
T cd04951 191 ILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGP--LRATLERLIKALGLSNRVKLLGL--RDDIAAYYNAADLF 266 (360)
T ss_pred EEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCC--cHHHHHHHHHhcCCCCcEEEecc--cccHHHHHHhhceE
Confidence 9999999999999999999999876 489999999987 4456666666554 56777764 34567899999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCC
Q 010752 481 LIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 481 l~PS~~E~fglv~lEAma~G~P 502 (502)
++||.+|+||++++|||++|+|
T Consensus 267 v~~s~~e~~~~~~~Ea~a~G~P 288 (360)
T cd04951 267 VLSSAWEGFGLVVAEAMACELP 288 (360)
T ss_pred EecccccCCChHHHHHHHcCCC
Confidence 9999999999999999999998
No 39
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.94 E-value=2.2e-25 Score=230.81 Aligned_cols=286 Identities=18% Similarity=0.178 Sum_probs=185.9
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecC-CCCccccCCceEEEEEeCCeeeEEEEEEEeecCce
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY-DQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (502)
.||++|...+ ..||++.++.+|+.+|.+.||++++++... +.+.. .....|+.
T Consensus 2 ~~il~ii~~~----~~GG~e~~~~~l~~~l~~~~~~~~v~~~~~~~~~~~----------------------~~~~~~i~ 55 (374)
T TIGR03088 2 PLIVHVVYRF----DVGGLENGLVNLINHLPADRYRHAVVALTEVSAFRK----------------------RIQRPDVA 55 (374)
T ss_pred ceEEEEeCCC----CCCcHHHHHHHHHhhccccccceEEEEcCCCChhHH----------------------HHHhcCce
Confidence 4899999875 459999999999999999999998887432 11111 01123566
Q ss_pred EEEEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHH
Q 010752 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 243 (502)
Q Consensus 164 v~~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~ 243 (502)
++.+..... . .. .+...+.+.++.. +|| |||+|...+.. .
T Consensus 56 ~~~~~~~~~--~--------------------~~----~~~~~l~~~l~~~------------~~D-ivh~~~~~~~~-~ 95 (374)
T TIGR03088 56 FYALHKQPG--K--------------------DV----AVYPQLYRLLRQL------------RPD-IVHTRNLAALE-A 95 (374)
T ss_pred EEEeCCCCC--C--------------------Ch----HHHHHHHHHHHHh------------CCC-EEEEcchhHHH-H
Confidence 654421100 0 00 1122333333332 699 89999754332 2
Q ss_pred HHHHHhccCCCCcCCCeE-EEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHH-HHHHHhcCccc
Q 010752 244 CYLKTMYKPKGMYKSAKV-VFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWM-KAGILESDMVL 321 (502)
Q Consensus 244 ~~lk~~~~~~~~~~~~pv-v~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~-k~~~~~ad~vi 321 (502)
.++... .++|+ +++.|...+.... . ......++ +.....+|.++
T Consensus 96 ~~~~~~-------~~~~~~i~~~h~~~~~~~~----------------------~-----~~~~~~~~~~~~~~~~~~~i 141 (374)
T TIGR03088 96 QLPAAL-------AGVPARIHGEHGRDVFDLD----------------------G-----SNWKYRWLRRLYRPLIHHYV 141 (374)
T ss_pred HHHHHh-------cCCCeEEEeecCcccccch----------------------h-----hHHHHHHHHHHHHhcCCeEE
Confidence 222222 24443 4444532210000 0 00122344 33345689999
Q ss_pred cCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCC
Q 010752 322 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 401 (502)
Q Consensus 322 ~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~ 401 (502)
++|+..++.+.+ .++++.+ ++.+|+||+|.+.|.|.... +...+.+... ..+
T Consensus 142 ~vs~~~~~~~~~--~~~~~~~------~~~vi~ngvd~~~~~~~~~~------------------~~~~~~~~~~--~~~ 193 (374)
T TIGR03088 142 AVSRDLEDWLRG--PVKVPPA------KIHQIYNGVDTERFHPSRGD------------------RSPILPPDFF--ADE 193 (374)
T ss_pred EeCHHHHHHHHH--hcCCChh------hEEEeccCccccccCCCccc------------------hhhhhHhhcC--CCC
Confidence 999999998874 3455444 78999999999888765311 1111222222 236
Q ss_pred CcEEEEEcCcccccCHHHHHHHHhhccc------CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeecChHHHHHH
Q 010752 402 IPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMI 473 (502)
Q Consensus 402 ~p~i~~iGrl~~~KG~d~ll~Al~~L~~------~~v~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i 473 (502)
.++|+++||+.++||++.+++|+.++.+ ++++|+++|+|+ .++.++++.+.++ +++.+.+ ..+++..+
T Consensus 194 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g--~~~~~~~~ 269 (374)
T TIGR03088 194 SVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGP--ARGACEQMVRAAGLAHLVWLPG--ERDDVPAL 269 (374)
T ss_pred CeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecCCc--hHHHHHHHHHHcCCcceEEEcC--CcCCHHHH
Confidence 6799999999999999999999998764 279999999987 4566777777665 3344444 24567889
Q ss_pred HHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 474 IAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 474 la~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
|+.||++++||.+|+||++++|||+||+|
T Consensus 270 ~~~adi~v~pS~~Eg~~~~~lEAma~G~P 298 (374)
T TIGR03088 270 MQALDLFVLPSLAEGISNTILEAMASGLP 298 (374)
T ss_pred HHhcCEEEeccccccCchHHHHHHHcCCC
Confidence 99999999999999999999999999998
No 40
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.94 E-value=7.8e-25 Score=222.36 Aligned_cols=298 Identities=21% Similarity=0.288 Sum_probs=200.0
Q ss_pred eEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceEE
Q 010752 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (502)
Q Consensus 86 kIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 165 (502)
||++++..|+| ..||.+..+..++.+|+++||+|.++++........... .++...
T Consensus 1 kil~~~~~~~p--~~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~----------------------~~~~~~ 56 (374)
T cd03817 1 KIGIFTDTYLP--QVNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEEV----------------------VVVRPF 56 (374)
T ss_pred CeeEeehhccC--CCCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCccccc----------------------cccccc
Confidence 69999999888 589999999999999999999999999875433221000 001111
Q ss_pred EEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCcc-chHHH
Q 010752 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT-SLIPC 244 (502)
Q Consensus 166 ~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t-~~~~~ 244 (502)
..... ...+ ....+ .+...+.+.++. .+|| +||+|...+ +....
T Consensus 57 ~~~~~-~~~~--------------------~~~~~-~~~~~~~~~~~~------------~~~D-iv~~~~~~~~~~~~~ 101 (374)
T cd03817 57 RVPTF-KYPD--------------------FRLPL-PIPRALIIILKE------------LGPD-IVHTHTPFSLGLLGL 101 (374)
T ss_pred ccccc-hhhh--------------------hhccc-cHHHHHHHHHhh------------cCCC-EEEECCchhhhhHHH
Confidence 00000 0000 00000 011122222222 2699 888886443 33333
Q ss_pred HHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchH-HHHHHHHHhcCccccC
Q 010752 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI-NWMKAGILESDMVLTV 323 (502)
Q Consensus 245 ~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~-~~~k~~~~~ad~vi~v 323 (502)
.+++. .++|+++++|+... . +. ......... . ..... .+.+..+..+|.++++
T Consensus 102 ~~~~~-------~~~~~i~~~~~~~~-~-~~----~~~~~~~~~----------~---~~~~~~~~~~~~~~~~d~i~~~ 155 (374)
T cd03817 102 RVARK-------LGIPVVATYHTMYE-D-YT----HYVPLGRLL----------A---RAVVRRKLSRRFYNRCDAVIAP 155 (374)
T ss_pred HHHHH-------cCCCEEEEecCCHH-H-HH----HHHhcccch----------h---HHHHHHHHHHHHhhhCCEEEec
Confidence 34333 58999999996532 0 00 000000000 0 00111 3556778899999999
Q ss_pred CHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCc
Q 010752 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (502)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p 403 (502)
|+..++.+.+ ++.. .++.+++||+|...+.+... +..++++++. .+.+
T Consensus 156 s~~~~~~~~~---~~~~-------~~~~vi~~~~~~~~~~~~~~--------------------~~~~~~~~~~--~~~~ 203 (374)
T cd03817 156 SEKIADLLRE---YGVK-------RPIEVIPTGIDLDRFEPVDG--------------------DDERRKLGIP--EDEP 203 (374)
T ss_pred cHHHHHHHHh---cCCC-------CceEEcCCccchhccCccch--------------------hHHHHhcCCC--CCCe
Confidence 9999888874 3322 25899999999988766431 1123444443 4667
Q ss_pred EEEEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeecChHHHHHHHHhcCE
Q 010752 404 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADF 479 (502)
Q Consensus 404 ~i~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~ila~ADi 479 (502)
+|+++|++.+.||++.+++++.++.+ ++++++++|.++ ..+.++++..+++ +++.+.+..+.+++..+|+.||+
T Consensus 204 ~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~ 281 (374)
T cd03817 204 VLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGP--EREELEELARELGLADRVIFTGFVPREELPDYYKAADL 281 (374)
T ss_pred EEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCc--hHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCE
Confidence 99999999999999999999999876 689999999987 4566777665543 67888888888899999999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCC
Q 010752 480 ILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 480 ~l~PS~~E~fglv~lEAma~G~P 502 (502)
+++||..|++|++++|||+||+|
T Consensus 282 ~l~~s~~e~~~~~~~Ea~~~g~P 304 (374)
T cd03817 282 FVFASTTETQGLVLLEAMAAGLP 304 (374)
T ss_pred EEecccccCcChHHHHHHHcCCc
Confidence 99999999999999999999998
No 41
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.94 E-value=2e-24 Score=220.31 Aligned_cols=287 Identities=20% Similarity=0.253 Sum_probs=192.4
Q ss_pred eEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceEE
Q 010752 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (502)
Q Consensus 86 kIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 165 (502)
|||+|+..|+| ..||.+.++.+|+++|.++||+|++++......... ....+++++
T Consensus 1 kil~i~~~~~p--~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~----------------------~~~~~~~~~ 56 (357)
T cd03795 1 RVLHVGKFYPP--DRGGIEQVIRDLAEGLAARGIEVAVLCASPEPKGRD----------------------EERNGHRVI 56 (357)
T ss_pred CeeEecCCCCC--CCCcHHHHHHHHHHHHHhCCCceEEEecCCCCcchh----------------------hhccCceEE
Confidence 79999999988 389999999999999999999999998764322110 011222333
Q ss_pred EEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHHHH
Q 010752 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (502)
Q Consensus 166 ~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~~~ 245 (502)
.++... .. .. ..... .++ ...+ +. ..++| +||+|..........
T Consensus 57 ~~~~~~--~~---------~~------~~~~~---~~~-----~~~~-~~---------~~~~D-ii~~~~~~~~~~~~~ 100 (357)
T cd03795 57 RAPSLL--NV---------AS------TPFSP---SFF-----KQLK-KL---------AKKAD-VIHLHFPNPLADLAL 100 (357)
T ss_pred Eeeccc--cc---------cc------ccccH---HHH-----HHHH-hc---------CCCCC-EEEEecCcchHHHHH
Confidence 221110 00 00 00000 000 0000 11 12699 899986444322222
Q ss_pred HHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccccCCH
Q 010752 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (502)
Q Consensus 246 lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (502)
.... .+.|++++.|+..+... . . ......+++..+..+|.++++|+
T Consensus 101 ~~~~-------~~~~~i~~~h~~~~~~~--------------~------~-------~~~~~~~~~~~~~~~d~vi~~s~ 146 (357)
T cd03795 101 LLLP-------RKKPVVVHWHSDIVKQK--------------L------L-------LKLYRPLQRRFLRRADAIVATSP 146 (357)
T ss_pred HHhc-------cCceEEEEEcChhhccc--------------h------h-------hhhhhHHHHHHHHhcCEEEeCcH
Confidence 2211 47899999995432110 0 0 00111334566889999999999
Q ss_pred HHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCcEE
Q 010752 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (502)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p~i 405 (502)
.+.+.+... .... .++.+||||+|.+.+.+.... +. ..... ..+.++|
T Consensus 147 ~~~~~~~~~--~~~~-------~~~~~i~~gi~~~~~~~~~~~------------------~~---~~~~~--~~~~~~i 194 (357)
T cd03795 147 NYAETSPVL--RRFR-------DKVRVIPLGLDPARYPRPDAL------------------EE---AIWRR--AAGRPFF 194 (357)
T ss_pred HHHHHHHHh--cCCc-------cceEEecCCCChhhcCCcchh------------------hh---HhhcC--CCCCcEE
Confidence 999877631 1111 278999999999887664310 00 11111 2366799
Q ss_pred EEEcCcccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHC--CCceEEEeecChHHHHHHHHhcCEEEEc
Q 010752 406 GFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFILIP 483 (502)
Q Consensus 406 ~~iGrl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~ila~ADi~l~P 483 (502)
+|+||+.+.||++.+++|+.++. +++++++|+|+ ..+.++++.++. ..++.+.+..+.+++..+++.||++++|
T Consensus 195 ~~~G~~~~~K~~~~li~a~~~l~--~~~l~i~G~g~--~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~p 270 (357)
T cd03795 195 LFVGRLVYYKGLDVLLEAAAALP--DAPLVIVGEGP--LEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFP 270 (357)
T ss_pred EEecccccccCHHHHHHHHHhcc--CcEEEEEeCCh--hHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEeC
Confidence 99999999999999999999996 89999999987 556677766544 3679999998888889999999999999
Q ss_pred CC--CCCCcHHHHHHHHcCCC
Q 010752 484 SR--FEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 484 S~--~E~fglv~lEAma~G~P 502 (502)
|. .|+||++++|||+||+|
T Consensus 271 s~~~~e~~g~~~~Ea~~~g~P 291 (357)
T cd03795 271 SVERSEAFGIVLLEAMAFGKP 291 (357)
T ss_pred CcccccccchHHHHHHHcCCC
Confidence 96 49999999999999998
No 42
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.94 E-value=6.8e-25 Score=222.22 Aligned_cols=288 Identities=18% Similarity=0.201 Sum_probs=186.9
Q ss_pred eEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceEE
Q 010752 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (502)
Q Consensus 86 kIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 165 (502)
||++|+..++|. ..||.+.++..|+++|+++||+|.++++........... .+....
T Consensus 1 kIl~i~~~~~~~-~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~----------------------~~~~~~ 57 (359)
T cd03823 1 RILVVNHLYPPR-SVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQDKEV----------------------IGVVVY 57 (359)
T ss_pred CeeEEcccCCcc-cccchHHHHHHHHHHHHhcCCceEEEeCCCCCCCccccc----------------------ccceee
Confidence 699999998884 679999999999999999999999999764432221000 000000
Q ss_pred EEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHHHH
Q 010752 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (502)
Q Consensus 166 ~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~~~ 245 (502)
.... ..... .......+ .........+...+.+.++. .+|| +||+|.+........
T Consensus 58 ~~~~-~~~~~--~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~------------~~~d-ii~~~~~~~~~~~~~ 113 (359)
T cd03823 58 GRPI-DEVLR--SALPRDLF--------HLSDYDNPAVVAEFARLLED------------FRPD-VVHFHHLQGLGVSIL 113 (359)
T ss_pred cccc-ccccC--CCchhhhh--------HHHhccCHHHHHHHHHHHHH------------cCCC-EEEECCccchHHHHH
Confidence 0000 00000 00000000 00000001122233333332 2699 899997643322222
Q ss_pred HHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccccCCH
Q 010752 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (502)
Q Consensus 246 lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (502)
..... .++|+++++|+..... + ...+. ....|.++++|+
T Consensus 114 ~~~~~------~~~~~i~~~hd~~~~~--~------------------------------~~~~~---~~~~d~ii~~s~ 152 (359)
T cd03823 114 RAARD------RGIPIVLTLHDYWLIC--P------------------------------RQGLF---KKGGDAVIAPSR 152 (359)
T ss_pred HHHHh------cCCCEEEEEeeeeeec--c------------------------------hhhhh---ccCCCEEEEeCH
Confidence 11111 4789999999653210 0 00111 112399999999
Q ss_pred HHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCcEE
Q 010752 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (502)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p~i 405 (502)
..++.+.+ ++.. ..++.+|+||+|...+.+... + ...+.++|
T Consensus 153 ~~~~~~~~---~~~~------~~~~~vi~n~~~~~~~~~~~~---------------------------~--~~~~~~~i 194 (359)
T cd03823 153 FLLDRYVA---NGLF------AEKISVIRNGIDLDRAKRPRR---------------------------A--PPGGRLRF 194 (359)
T ss_pred HHHHHHHH---cCCC------ccceEEecCCcChhhcccccc---------------------------C--CCCCceEE
Confidence 99999885 2322 227899999999987765421 0 12356789
Q ss_pred EEEcCcccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCEEEEcCC
Q 010752 406 GFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSR 485 (502)
Q Consensus 406 ~~iGrl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi~l~PS~ 485 (502)
+|+|++.+.||++.+++++.++.+++++|+++|.+......... . ....++.+.+..+.+++..+++.||++++||.
T Consensus 195 ~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~G~~~~~~~~~~~--~-~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~ 271 (359)
T cd03823 195 GFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEEESYE--L-EGDPRVEFLGAYPQEEIDDFYAEIDVLVVPSI 271 (359)
T ss_pred EEEecCccccCHHHHHHHHHHHHhcCcEEEEEcCchhhhHHHHh--h-cCCCeEEEeCCCCHHHHHHHHHhCCEEEEcCc
Confidence 99999999999999999999997779999999998743222211 1 34467889888888899999999999999998
Q ss_pred -CCCCcHHHHHHHHcCCC
Q 010752 486 -FEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 486 -~E~fglv~lEAma~G~P 502 (502)
.|++|++++|||+||+|
T Consensus 272 ~~e~~~~~~~Ea~a~G~P 289 (359)
T cd03823 272 WPENFPLVIREALAAGVP 289 (359)
T ss_pred ccCCCChHHHHHHHCCCC
Confidence 59999999999999998
No 43
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.94 E-value=2.6e-25 Score=234.83 Aligned_cols=156 Identities=16% Similarity=0.081 Sum_probs=127.0
Q ss_pred HHHHHHHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHH
Q 010752 309 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 388 (502)
Q Consensus 309 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~ 388 (502)
+++..+..||.++++|+++++.+.+ .++.. .++.+|+||+|++.+.+...
T Consensus 182 ~~~~~~~~aD~ii~~S~~~~~~~~~--~~~~~-------~~~~vi~~gvd~~~~~~~~~--------------------- 231 (419)
T cd03806 182 LYGLAGSFADVVMVNSTWTRNHIRS--LWKRN-------TKPSIVYPPCDVEELLKLPL--------------------- 231 (419)
T ss_pred HHHHHhhcCCEEEECCHHHHHHHHH--HhCcC-------CCcEEEcCCCCHHHhccccc---------------------
Confidence 4466778999999999999999875 12211 27899999999887754321
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc--C-----CeEEEEEeCCCh----hhHHHHHHHHHHCC-
Q 010752 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E-----NVQIIVLGTGKK----PMEKQLEQLEILYP- 456 (502)
Q Consensus 389 ~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~--~-----~v~lvivG~g~~----~~~~~l~~l~~~~~- 456 (502)
....+.++|+|+||++++||++.+++|++++.+ + +++|+|+|++.. .+.+++++++++++
T Consensus 232 --------~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l 303 (419)
T cd03806 232 --------DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGL 303 (419)
T ss_pred --------ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCC
Confidence 012356799999999999999999999999875 2 599999998742 35567777777654
Q ss_pred -CceEEEeecChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 457 -EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 457 -~~v~~~~~~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
++|.+.+..+.+++..+|+.||++++||..|+||++++|||+||+|
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~p 350 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLI 350 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCc
Confidence 6799999888899999999999999999999999999999999997
No 44
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.93 E-value=3.1e-24 Score=218.75 Aligned_cols=277 Identities=19% Similarity=0.179 Sum_probs=193.5
Q ss_pred eEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceEE
Q 010752 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (502)
Q Consensus 86 kIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 165 (502)
||||++..|+| |.+.++.+++++|.++||+|.++++.........+. .
T Consensus 1 ki~~~~~~~~~-----~~~~~~~~~~~~L~~~g~~v~v~~~~~~~~~~~~~~-----------------~---------- 48 (355)
T cd03799 1 KIAYLVKEFPR-----LSETFILREILALEAAGHEVEIFSLRPPEDTLVHPE-----------------D---------- 48 (355)
T ss_pred CEEEECCCCCC-----cchHHHHHHHHHHHhCCCeEEEEEecCccccccccc-----------------c----------
Confidence 69999998755 267899999999999999999999764322110000 0
Q ss_pred EEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHHHH
Q 010752 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (502)
Q Consensus 166 ~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~~~ 245 (502)
...+.... +......+......+...++. .++| +||+|.+........
T Consensus 49 -~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~------------~~~D-ii~~~~~~~~~~~~~ 96 (355)
T cd03799 49 -RAELARTR------------------YLARSLALLAQALVLARELRR------------LGID-HIHAHFGTTPATVAM 96 (355)
T ss_pred -cccccchH------------------HHHHHHHHHHHHHHHHHHHHh------------cCCC-EEEECCCCchHHHHH
Confidence 00000000 000111111111222222221 2699 999997765554444
Q ss_pred HHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccccCCH
Q 010752 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (502)
Q Consensus 246 lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (502)
+.... .++|+++++|+...... ....+++..+..+|.++++|+
T Consensus 97 ~~~~~------~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~vi~~s~ 139 (355)
T cd03799 97 LASRL------GGIPYSFTAHGKDIFRS-------------------------------PDAIDLDEKLARADFVVAISE 139 (355)
T ss_pred HHHHh------cCCCEEEEEeccccccc-------------------------------CchHHHHHHHhhCCEEEECCH
Confidence 44433 47899999996542110 001345666889999999999
Q ss_pred HHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCcEE
Q 010752 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (502)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p~i 405 (502)
..++.+.+ .++.... ++.+++||+|.+.+.+... ....+.+.|
T Consensus 140 ~~~~~l~~--~~~~~~~------~~~vi~~~~d~~~~~~~~~-----------------------------~~~~~~~~i 182 (355)
T cd03799 140 YNRQQLIR--LLGCDPD------KIHVVHCGVDLERFPPRPP-----------------------------PPPGEPLRI 182 (355)
T ss_pred HHHHHHHH--hcCCCcc------cEEEEeCCcCHHHcCCccc-----------------------------cccCCCeEE
Confidence 99999985 2244333 7899999999887765320 012356689
Q ss_pred EEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHC--CCceEEEeecChHHHHHHHHhcCEEE
Q 010752 406 GFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFIL 481 (502)
Q Consensus 406 ~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~ila~ADi~l 481 (502)
+|+|++.+.||++.+++++.++.+ ++++++++|.++ ..+.+++..+++ ++++.+.+..+.+++..+|+.||+++
T Consensus 183 ~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~l 260 (355)
T cd03799 183 LSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGP--LRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFV 260 (355)
T ss_pred EEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCc--cHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEEE
Confidence 999999999999999999999877 589999999987 345666666654 46789999888889999999999999
Q ss_pred EcCCC------CCCcHHHHHHHHcCCC
Q 010752 482 IPSRF------EPCGLIQLHAMRYGTV 502 (502)
Q Consensus 482 ~PS~~------E~fglv~lEAma~G~P 502 (502)
+||.+ |+||++++|||++|+|
T Consensus 261 ~~s~~~~~~~~e~~~~~~~Ea~a~G~P 287 (355)
T cd03799 261 LPSVTAADGDREGLPVVLMEAMAMGLP 287 (355)
T ss_pred ecceecCCCCccCccHHHHHHHHcCCC
Confidence 99999 9999999999999998
No 45
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.93 E-value=3.6e-24 Score=216.43 Aligned_cols=288 Identities=20% Similarity=0.200 Sum_probs=197.5
Q ss_pred eEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceEE
Q 010752 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (502)
Q Consensus 86 kIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 165 (502)
||++|...+.+ ||.+.++..|+++|.+.||+|.+++......... .....|+++.
T Consensus 1 ~i~~i~~~~~~----gG~~~~~~~l~~~l~~~~~~v~~~~~~~~~~~~~---------------------~~~~~~i~v~ 55 (365)
T cd03807 1 KVLHVITGLDV----GGAERMLVRLLKGLDRDRFEHVVISLTDRGELGE---------------------ELEEAGVPVY 55 (365)
T ss_pred CeEEEEeeccC----ccHHHHHHHHHHHhhhccceEEEEecCcchhhhH---------------------HHHhcCCeEE
Confidence 69999998755 9999999999999999999999998642211100 0001356665
Q ss_pred EEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHHHH
Q 010752 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (502)
Q Consensus 166 ~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~~~ 245 (502)
.+..+.... .. .....+.+.++.. +|| +||+|.+.+......
T Consensus 56 ~~~~~~~~~---------------------~~----~~~~~~~~~~~~~------------~~d-iv~~~~~~~~~~~~~ 97 (365)
T cd03807 56 CLGKRPGRP---------------------DP----GALLRLYKLIRRL------------RPD-VVHTWMYHADLYGGL 97 (365)
T ss_pred EEecccccc---------------------cH----HHHHHHHHHHHhh------------CCC-EEEeccccccHHHHH
Confidence 553221100 00 1112222333322 699 899998777666555
Q ss_pred HHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHH-HHHHHHhcCccccCC
Q 010752 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINW-MKAGILESDMVLTVS 324 (502)
Q Consensus 246 lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~-~k~~~~~ad~vi~vS 324 (502)
..... .+.|++++.|+...... .. ......+ .+.....+|.++++|
T Consensus 98 ~~~~~------~~~~~i~~~~~~~~~~~-------------~~--------------~~~~~~~~~~~~~~~~~~~i~~s 144 (365)
T cd03807 98 AARLA------GVPPVIWGIRHSDLDLG-------------KK--------------STRLVARLRRLLSSFIPLIVANS 144 (365)
T ss_pred HHHhc------CCCcEEEEecCCccccc-------------ch--------------hHhHHHHHHHHhccccCeEEecc
Confidence 55432 47899999997653110 00 0011222 244456789999999
Q ss_pred HHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCcE
Q 010752 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (502)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p~ 404 (502)
+..++.+.+ .+++.+ ++.+++||+|...+.+.... +..++++++++ ++.++
T Consensus 145 ~~~~~~~~~---~~~~~~------~~~vi~~~~~~~~~~~~~~~------------------~~~~~~~~~~~--~~~~~ 195 (365)
T cd03807 145 AAAAEYHQA---IGYPPK------KIVVIPNGVDTERFSPDLDA------------------RARLREELGLP--EDTFL 195 (365)
T ss_pred HHHHHHHHH---cCCChh------heeEeCCCcCHHhcCCcccc------------------hHHHHHhcCCC--CCCeE
Confidence 999999885 354444 78999999998877664321 33455677765 46779
Q ss_pred EEEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHH-HC--CCceEEEeecChHHHHHHHHhcCE
Q 010752 405 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEI-LY--PEKARGVAKFNIPLAHMIIAGADF 479 (502)
Q Consensus 405 i~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~-~~--~~~v~~~~~~~~~~~~~ila~ADi 479 (502)
|+++||+.+.||++.+++|+.++.+ ++++|+++|.+.. ....+++.. .+ .+++.+.+. .+++..+|+.||+
T Consensus 196 i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi 271 (365)
T cd03807 196 IGIVARLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPD--RANLELLALKELGLEDKVILLGE--RSDVPALLNALDV 271 (365)
T ss_pred EEEecccchhcCHHHHHHHHHHHHHhCCCeEEEEecCCcc--hhHHHHHHHHhcCCCceEEEccc--cccHHHHHHhCCE
Confidence 9999999999999999999999876 5899999998863 233333333 33 345665553 3457789999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCC
Q 010752 480 ILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 480 ~l~PS~~E~fglv~lEAma~G~P 502 (502)
+++||.+|++|++++|||+||+|
T Consensus 272 ~v~ps~~e~~~~~~~Ea~a~g~P 294 (365)
T cd03807 272 FVLSSLSEGFPNVLLEAMACGLP 294 (365)
T ss_pred EEeCCccccCCcHHHHHHhcCCC
Confidence 99999999999999999999998
No 46
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.93 E-value=1.9e-24 Score=222.20 Aligned_cols=205 Identities=19% Similarity=0.222 Sum_probs=155.4
Q ss_pred CCCEEEEEcCCccchHHHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccch
Q 010752 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (502)
Q Consensus 227 ~pDvVih~h~~~t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~ 306 (502)
+|| |||+|....+.....+.+. .++|++++.|+........ .... . . ....
T Consensus 82 ~~d-vvh~~~~~~~~~~~~~~~~-------~~~p~i~~~h~~~~~~~~~------------~~~~---~-~-----~~~~ 132 (367)
T cd05844 82 RPD-LVHAHFGFDGVYALPLARR-------LGVPLVVTFHGFDATTSLA------------LLLR---S-R-----WALY 132 (367)
T ss_pred CCC-EEEeccCchHHHHHHHHHH-------cCCCEEEEEeCccccccch------------hhcc---c-c-----hhHH
Confidence 699 8999976666555555443 5899999999653211000 0000 0 0 0011
Q ss_pred HHHHHHHHHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHH
Q 010752 307 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 386 (502)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~ 386 (502)
..+.+..+..+|.++++|+..++.+.+ +|++.+ ++.+++||+|.+.+.|...
T Consensus 133 ~~~~~~~~~~~d~ii~~s~~~~~~~~~---~~~~~~------~i~vi~~g~d~~~~~~~~~------------------- 184 (367)
T cd05844 133 ARRRRRLARRAALFIAVSQFIRDRLLA---LGFPPE------KVHVHPIGVDTAKFTPATP------------------- 184 (367)
T ss_pred HHHHHHHHHhcCEEEECCHHHHHHHHH---cCCCHH------HeEEecCCCCHHhcCCCCC-------------------
Confidence 233355678899999999999999885 355544 7899999999887765321
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHC--CCceEEE
Q 010752 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGV 462 (502)
Q Consensus 387 k~~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~ 462 (502)
..+.++++|+|++.+.||++.+++|++++.+ ++++|+++|.|+ ..+.++++.+++ .+++.+.
T Consensus 185 ------------~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~--~~~~~~~~~~~~~~~~~v~~~ 250 (367)
T cd05844 185 ------------ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGP--LLAALEALARALGLGGRVTFL 250 (367)
T ss_pred ------------CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCch--HHHHHHHHHHHcCCCCeEEEC
Confidence 1356689999999999999999999999876 589999999886 556777777774 5678888
Q ss_pred eecChHHHHHHHHhcCEEEEcCC------CCCCcHHHHHHHHcCCC
Q 010752 463 AKFNIPLAHMIIAGADFILIPSR------FEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 463 ~~~~~~~~~~ila~ADi~l~PS~------~E~fglv~lEAma~G~P 502 (502)
+..+.+++..+|+.||++++||. .|+||++++|||+||+|
T Consensus 251 g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~P 296 (367)
T cd05844 251 GAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVP 296 (367)
T ss_pred CCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCC
Confidence 88888889999999999999997 49999999999999998
No 47
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.93 E-value=5.9e-24 Score=216.06 Aligned_cols=290 Identities=23% Similarity=0.234 Sum_probs=190.4
Q ss_pred eEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceEE
Q 010752 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (502)
Q Consensus 86 kIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 165 (502)
||++|+..|+| ..||.+..+..|+++|+++||+|.++++.......... +.+.+.
T Consensus 1 kIl~i~~~~~p--~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~-----------------------~~~~~~ 55 (364)
T cd03814 1 RIAIVTDTFLP--QVNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGPA-----------------------RVVPVP 55 (364)
T ss_pred CeEEEecccCc--cccceehHHHHHHHHHHHCCCEEEEEeCCchhhccCCC-----------------------Cceeec
Confidence 69999999988 35999999999999999999999999976432211000 001111
Q ss_pred EEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCcc-chHHH
Q 010752 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT-SLIPC 244 (502)
Q Consensus 166 ~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t-~~~~~ 244 (502)
....+.+.. +...... .....+.++. ++|| +||+|.... +....
T Consensus 56 ~~~~~~~~~------------------~~~~~~~----~~~~~~~~~~------------~~pd-ii~~~~~~~~~~~~~ 100 (364)
T cd03814 56 SVPLPGYPE------------------IRLALPP----RRRVRRLLDA------------FAPD-VVHIATPGPLGLAAL 100 (364)
T ss_pred ccccCcccc------------------eEecccc----hhhHHHHHHh------------cCCC-EEEEeccchhhHHHH
Confidence 000000000 0000000 0111111222 2699 888885443 23333
Q ss_pred HHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccccCC
Q 010752 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (502)
Q Consensus 245 ~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 324 (502)
.+... .++|+++++|+...+- .. .. ... .. ........+..+..+|.++++|
T Consensus 101 ~~~~~-------~~~~~i~~~~~~~~~~-~~-----~~-~~~----------~~----~~~~~~~~~~~~~~~d~i~~~s 152 (364)
T cd03814 101 RAARR-------LGIPVVTSYHTDFPEY-LR-----YY-GLG----------PL----SWLAWAYLRWFHNRADRVLVPS 152 (364)
T ss_pred HHHHH-------cCCCEEEEEecChHHH-hh-----hc-ccc----------hH----hHhhHHHHHHHHHhCCEEEeCC
Confidence 33332 5899999999643210 00 00 000 00 0011234456678899999999
Q ss_pred HHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCcE
Q 010752 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (502)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p~ 404 (502)
+...+.+.. .+. .++.+++||+|.+.+.|...+ ...+.+++ ..+.++
T Consensus 153 ~~~~~~~~~---~~~--------~~~~~~~~g~~~~~~~~~~~~-------------------~~~~~~~~---~~~~~~ 199 (364)
T cd03814 153 PSLADELRA---RGF--------RRVRLWPRGVDTELFHPRRRD-------------------EALRARLG---PPDRPV 199 (364)
T ss_pred HHHHHHHhc---cCC--------CceeecCCCccccccCccccc-------------------HHHHHHhC---CCCCeE
Confidence 999986653 221 168999999999888765421 12233443 235678
Q ss_pred EEEEcCcccccCHHHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCEEEEc
Q 010752 405 IGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIP 483 (502)
Q Consensus 405 i~~iGrl~~~KG~d~ll~Al~~L~~-~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi~l~P 483 (502)
|+|+|++.+.||++.+++++.++.+ ++++|+++|.+.. ++.++ ...+++.+.+..+.+++..+|+.||++++|
T Consensus 200 i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~G~~~~--~~~~~----~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~ 273 (364)
T cd03814 200 LLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDGPA--RARLE----ARYPNVHFLGFLDGEELAAAYASADVFVFP 273 (364)
T ss_pred EEEEeccccccCHHHHHHHHHHhhhcCCceEEEEeCCch--HHHHh----ccCCcEEEEeccCHHHHHHHHHhCCEEEEC
Confidence 9999999999999999999999976 5899999998863 33333 345678988888888899999999999999
Q ss_pred CCCCCCcHHHHHHHHcCCC
Q 010752 484 SRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 484 S~~E~fglv~lEAma~G~P 502 (502)
|..|+||++++|||+||+|
T Consensus 274 s~~e~~~~~~lEa~a~g~P 292 (364)
T cd03814 274 SRTETFGLVVLEAMASGLP 292 (364)
T ss_pred cccccCCcHHHHHHHcCCC
Confidence 9999999999999999998
No 48
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.93 E-value=8.2e-24 Score=215.41 Aligned_cols=316 Identities=20% Similarity=0.199 Sum_probs=202.0
Q ss_pred eEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceEE
Q 010752 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (502)
Q Consensus 86 kIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 165 (502)
||++|+..++|. .||.+.++..++++|+++||+|+++++............ .......|++++
T Consensus 1 kIl~i~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~ 63 (394)
T cd03794 1 KILILSQYFPPE--LGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKG---------------YKREEVDGVRVH 63 (394)
T ss_pred CEEEEecccCCc--cCCcceeHHHHHHHHHhCCceEEEEecCCCccccccccc---------------ceEEecCCeEEE
Confidence 699999998884 499999999999999999999999987643222110000 111234567776
Q ss_pred EEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCc-c-chHH
Q 010752 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWH-T-SLIP 243 (502)
Q Consensus 166 ~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~-t-~~~~ 243 (502)
.+........ . +.....++..+.......... .. .+|| +||+|.+. . ....
T Consensus 64 ~~~~~~~~~~-------~---------~~~~~~~~~~~~~~~~~~~~~-~~---------~~~D-~v~~~~~~~~~~~~~ 116 (394)
T cd03794 64 RVPLPPYKKN-------G---------LLKRLLNYLSFALSALLALLK-RR---------RRPD-VIIATSPPLLIALAA 116 (394)
T ss_pred EEecCCCCcc-------c---------hHHHHHhhhHHHHHHHHHHHh-cc---------cCCC-EEEEcCChHHHHHHH
Confidence 5543221110 0 101111222222222222221 11 2699 88888632 2 3333
Q ss_pred HHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccccC
Q 010752 244 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323 (502)
Q Consensus 244 ~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 323 (502)
..++.. .++|+++++|+........ ....... .........+.+..+..+|.++++
T Consensus 117 ~~~~~~-------~~~~~i~~~h~~~~~~~~~-----~~~~~~~------------~~~~~~~~~~~~~~~~~~d~vi~~ 172 (394)
T cd03794 117 LLLARL-------KGAPFVLEVRDLWPESAVA-----LGLLKNG------------SLLYRLLRKLERLIYRRADAIVVI 172 (394)
T ss_pred HHHHHh-------cCCCEEEEehhhcchhHHH-----ccCcccc------------chHHHHHHHHHHHHHhcCCEEEEE
Confidence 333332 4899999999753211000 0000000 000001223346678899999999
Q ss_pred CHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCc
Q 010752 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (502)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p 403 (502)
|+..++.+.. ++.... ++.+++||+|...+.+.... .. +.+.. ...+.+
T Consensus 173 s~~~~~~~~~---~~~~~~------~~~~i~~~~~~~~~~~~~~~-------------------~~-~~~~~--~~~~~~ 221 (394)
T cd03794 173 SPGMREYLVR---RGVPPE------KISVIPNGVDLELFKPPPAD-------------------ES-LRKEL--GLDDKF 221 (394)
T ss_pred CHHHHHHHHh---cCCCcC------ceEEcCCCCCHHHcCCccch-------------------hh-hhhcc--CCCCcE
Confidence 9999998872 333333 78999999998877664311 00 12222 234677
Q ss_pred EEEEEcCcccccCHHHHHHHHhhcccC-CeEEEEEeCCChhhHHHHHHHHHHC-CCceEEEeecChHHHHHHHHhcCEEE
Q 010752 404 VIGFIGRLEEQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILY-PEKARGVAKFNIPLAHMIIAGADFIL 481 (502)
Q Consensus 404 ~i~~iGrl~~~KG~d~ll~Al~~L~~~-~v~lvivG~g~~~~~~~l~~l~~~~-~~~v~~~~~~~~~~~~~ila~ADi~l 481 (502)
+|+|+|++.++||++.+++|+.++.+. +++|+++|.|. ..+.++++.... ..++.+.+..+.+++..+|+.||+++
T Consensus 222 ~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i 299 (394)
T cd03794 222 VVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLIVGDGP--EKEELKELAKALGLDNVTFLGRVPKEELPELLAAADVGL 299 (394)
T ss_pred EEEEecCcccccCHHHHHHHHHHHhhcCCeEEEEeCCcc--cHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCeeE
Confidence 899999999999999999999999774 89999999987 344555543333 35788888788888999999999999
Q ss_pred EcCCCCCC-----cHHHHHHHHcCCC
Q 010752 482 IPSRFEPC-----GLIQLHAMRYGTV 502 (502)
Q Consensus 482 ~PS~~E~f-----glv~lEAma~G~P 502 (502)
+||..|++ +++++|||+||+|
T Consensus 300 ~~~~~~~~~~~~~p~~~~Ea~~~G~p 325 (394)
T cd03794 300 VPLKPGPAFEGVSPSKLFEYMAAGKP 325 (394)
T ss_pred EeccCcccccccCchHHHHHHHCCCc
Confidence 99999876 7889999999998
No 49
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.93 E-value=1.3e-23 Score=221.68 Aligned_cols=308 Identities=14% Similarity=0.042 Sum_probs=190.2
Q ss_pred CceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCce
Q 010752 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (502)
..+|++++.. .+|.+..+..++++|+++||+|+|+++..+...+. .....||.
T Consensus 3 ~~~~~~~~~~------~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~~~---------------------~~~~~~v~ 55 (415)
T cd03816 3 RKRVCVLVLG------DIGRSPRMQYHALSLAKHGWKVDLVGYLETPPHDE---------------------ILSNPNIT 55 (415)
T ss_pred ccEEEEEEec------ccCCCHHHHHHHHHHHhcCceEEEEEecCCCCCHH---------------------HhcCCCEE
Confidence 3577788763 36667788999999999999999998764221110 01124677
Q ss_pred EEEEeCCc-ccccccCCCCCcccCCCCCCCCcchHHHH-HHHHHHHHHhhhh-hcccCCCCCCCCCCCCEEEEEcCCcc-
Q 010752 164 RVFVDHPW-FLAKVWGKTQSKIYGPRTGEDYQDNQLRF-SLLCQAALEAPRI-LNLNSNKYFSGPYGEDVVFVANDWHT- 239 (502)
Q Consensus 164 v~~i~~p~-~~~~~~~~~~~~~y~~~~g~~~~~~~~r~-~~~~~a~~~~~~~-l~~~~~~~~~~~~~pDvVih~h~~~t- 239 (502)
++.+..+. ...+ .....++ +.........++. +.. .+|| +||+|....
T Consensus 56 ~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~l~~~---------~~~D-vi~~~~~~~~ 107 (415)
T cd03816 56 IHPLPPPPQRLNK------------------LPFLLFAPLKVLWQFFSLLWLLYKL---------RPAD-YILIQNPPSI 107 (415)
T ss_pred EEECCCCcccccc------------------chHHHHHHHHHHHHHHHHHHHHHhc---------CCCC-EEEEeCCCCc
Confidence 76554321 0000 0011111 1111111111111 111 1699 888986443
Q ss_pred --chHHHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHH-HHHHHh
Q 010752 240 --SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWM-KAGILE 316 (502)
Q Consensus 240 --~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~-k~~~~~ 316 (502)
+.++.+++.. .++|+|++.|+..+.- ..++... .....+...|+ +..++.
T Consensus 108 ~~~~~a~~~~~~-------~~~~~V~~~h~~~~~~-------~~~~~~~-------------~~~~~~~~~~~e~~~~~~ 160 (415)
T cd03816 108 PTLLIAWLYCLL-------RRTKLIIDWHNYGYTI-------LALKLGE-------------NHPLVRLAKWYEKLFGRL 160 (415)
T ss_pred hHHHHHHHHHHH-------hCCeEEEEcCCchHHH-------HhcccCC-------------CCHHHHHHHHHHHHHhhc
Confidence 2223333433 4789999999753210 0001000 00000233343 455678
Q ss_pred cCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHH----
Q 010752 317 SDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA---- 392 (502)
Q Consensus 317 ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~---- 392 (502)
+|.|+++|+..++.+.+ +|...+ ++.+|+||. ...|.|.... ..+..+.+
T Consensus 161 ad~ii~vS~~~~~~l~~---~~~~~~------ki~vI~Ng~-~~~f~p~~~~----------------~~~~~~~~~~~~ 214 (415)
T cd03816 161 ADYNLCVTKAMKEDLQQ---FNNWKI------RATVLYDRP-PEQFRPLPLE----------------EKHELFLKLAKT 214 (415)
T ss_pred CCEeeecCHHHHHHHHh---hhccCC------CeeecCCCC-HHHceeCcHH----------------HHHHHHHhcccc
Confidence 99999999999999874 455444 899999994 4566664310 01111111
Q ss_pred ---------HhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc--------CCeEEEEEeCCChhhHHHHHHHHHHC
Q 010752 393 ---------EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--------ENVQIIVLGTGKKPMEKQLEQLEILY 455 (502)
Q Consensus 393 ---------~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~--------~~v~lvivG~g~~~~~~~l~~l~~~~ 455 (502)
..++. .++..+++++||+.++||++.+++|+..+.+ ++++|+++|+|+ .++.++++.+++
T Consensus 215 ~~~~~~~~~~~~~~-~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~--~~~~l~~~~~~~ 291 (415)
T cd03816 215 FLTRELRIGAVQLS-EERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGP--LKEKYLERIKEL 291 (415)
T ss_pred ccccccccccceec-CCCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCc--cHHHHHHHHHHc
Confidence 11222 1244578889999999999999999999863 479999999997 567788887776
Q ss_pred C-CceEEEe-ecChHHHHHHHHhcCEEEEcCC---CCCCcHHHHHHHHcCCC
Q 010752 456 P-EKARGVA-KFNIPLAHMIIAGADFILIPSR---FEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 456 ~-~~v~~~~-~~~~~~~~~ila~ADi~l~PS~---~E~fglv~lEAma~G~P 502 (502)
+ +++.+.+ ..+.+++..+|+.||+++.|+. .|++|++++|||+||+|
T Consensus 292 ~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~P 343 (415)
T cd03816 292 KLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLP 343 (415)
T ss_pred CCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCC
Confidence 6 4566664 4577888999999999997532 48899999999999998
No 50
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.93 E-value=9.2e-24 Score=216.07 Aligned_cols=279 Identities=17% Similarity=0.184 Sum_probs=184.5
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v 164 (502)
|||++++.. + ..||.+.++..++.+|.++||+|.+++....
T Consensus 1 MkIl~~~~~--~--~~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~----------------------------------- 41 (365)
T cd03825 1 MKVLHLNTS--D--ISGGAARAAYRLHRALQAAGVDSTMLVQEKK----------------------------------- 41 (365)
T ss_pred CeEEEEecC--C--CCCcHHHHHHHHHHHHHhcCCceeEEEeecc-----------------------------------
Confidence 899999874 3 4599999999999999999999999986421
Q ss_pred EEEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHHH
Q 010752 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (502)
Q Consensus 165 ~~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~~ 244 (502)
.+ .+ .++ ..++| |||+|.+..+....
T Consensus 42 ------~~-~~----------------------------------~~~------------~~~~d-iih~~~~~~~~~~~ 67 (365)
T cd03825 42 ------AL-IS----------------------------------KIE------------IINAD-IVHLHWIHGGFLSI 67 (365)
T ss_pred ------hh-hh----------------------------------Chh------------cccCC-EEEEEccccCccCH
Confidence 00 00 001 12699 89999866655433
Q ss_pred HHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCccc-cc--ccccccCCCC-CcccchHHHHHHHH-HhcCc
Q 010752 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQF-KS--SFDFIDGYNK-PVRGRKINWMKAGI-LESDM 319 (502)
Q Consensus 245 ~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~-~~--~~~~~~~~~~-~~~~~~~~~~k~~~-~~ad~ 319 (502)
....... .++|+++++|+..... ....+. .....+ .. .......+.. ........+.+..+ ..++.
T Consensus 68 ~~~~~~~-----~~~~~v~~~hd~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (365)
T cd03825 68 EDLSKLL-----DRKPVVWTLHDMWPFT--GGCHYP--GGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLT 138 (365)
T ss_pred HHHHHHH-----cCCCEEEEcccCcccc--cccCCc--cccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcE
Confidence 3332220 4889999999753211 000000 000000 00 0000000000 00011122222222 45778
Q ss_pred cccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCC
Q 010752 320 VLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 399 (502)
Q Consensus 320 vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~ 399 (502)
++++|++.++.+.+ .+.++ ..++.+++||+|.+.|.|.. ++..+..++++
T Consensus 139 ~v~~s~~~~~~~~~--~~~~~------~~~~~vi~ngi~~~~~~~~~--------------------~~~~~~~~~~~-- 188 (365)
T cd03825 139 IVAPSRWLADCARS--SSLFK------GIPIEVIPNGIDTTIFRPRD--------------------KREARKRLGLP-- 188 (365)
T ss_pred EEehhHHHHHHHHh--ccccC------CCceEEeCCCCcccccCCCc--------------------HHHHHHHhCCC--
Confidence 99999999988875 12222 23899999999998886643 34456666665
Q ss_pred CCCcEEEEEcCccc--ccCHHHHHHHHhhccc---CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecC-hHHHHHH
Q 010752 400 RNIPVIGFIGRLEE--QKGSDILAAAIPHFIK---ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN-IPLAHMI 473 (502)
Q Consensus 400 ~~~p~i~~iGrl~~--~KG~d~ll~Al~~L~~---~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~-~~~~~~i 473 (502)
++.+++++.|+... .||++.+++|++.+.+ ++++++++|.++...+. ....++.+.+..+ .+.+..+
T Consensus 189 ~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~~~~-------~~~~~v~~~g~~~~~~~~~~~ 261 (365)
T cd03825 189 ADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPP-------DLPFPVHYLGSLNDDESLALI 261 (365)
T ss_pred CCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchhhhc-------cCCCceEecCCcCCHHHHHHH
Confidence 35567777777765 8999999999999876 68999999998742211 3445688888887 6778899
Q ss_pred HHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 474 IAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 474 la~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
|+.||++++||.+|+||++++|||+||+|
T Consensus 262 ~~~ad~~l~ps~~e~~g~~~~Eam~~g~P 290 (365)
T cd03825 262 YSAADVFVVPSLQENFPNTAIEALACGTP 290 (365)
T ss_pred HHhCCEEEeccccccccHHHHHHHhcCCC
Confidence 99999999999999999999999999998
No 51
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.93 E-value=6.4e-24 Score=233.99 Aligned_cols=211 Identities=13% Similarity=0.105 Sum_probs=146.1
Q ss_pred CCCEEEEEcCCccchHHHHHHHhccCCCCcCCCeEEE-EEecCccccccccccccccCCCcccccccccccCCCCCcccc
Q 010752 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF-CIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 305 (502)
Q Consensus 227 ~pDvVih~h~~~t~~~~~~lk~~~~~~~~~~~~pvv~-tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~ 305 (502)
+|| |||+|...+.+++.++... .++|+++ +.|+... . .. +..+ ..
T Consensus 400 kpD-IVH~h~~~a~~lg~lAa~~-------~gvPvIv~t~h~~~~-~-~~---------~~~~---------------~~ 445 (694)
T PRK15179 400 VPS-VVHIWQDGSIFACALAALL-------AGVPRIVLSVRTMPP-V-DR---------PDRY---------------RV 445 (694)
T ss_pred CCc-EEEEeCCcHHHHHHHHHHH-------cCCCEEEEEeCCCcc-c-cc---------hhHH---------------HH
Confidence 699 9999988877666666543 4778876 4564321 0 00 0000 00
Q ss_pred hHHHHHHHHHh--cCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccch
Q 010752 306 KINWMKAGILE--SDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 383 (502)
Q Consensus 306 ~~~~~k~~~~~--ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k 383 (502)
....+...+.. ++.++++|+..++.+.. .+|++.+ ++.+||||+|...|.|....
T Consensus 446 ~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~--~~g~~~~------kI~VI~NGVd~~~f~~~~~~--------------- 502 (694)
T PRK15179 446 EYDIIYSELLKMRGVALSSNSQFAAHRYAD--WLGVDER------RIPVVYNGLAPLKSVQDDAC--------------- 502 (694)
T ss_pred HHHHHHHHHHhcCCeEEEeCcHHHHHHHHH--HcCCChh------HEEEECCCcCHHhcCCCchh---------------
Confidence 01111111223 45667778888887763 3566555 89999999998877653210
Q ss_pred HHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC--Cce
Q 010752 384 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKA 459 (502)
Q Consensus 384 ~~~k~~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~~--~~v 459 (502)
+. .+..+......+.++|+++||+.++||++.+++|+.++.+ ++++|+|+|+|+ .++.++++.++++ ++|
T Consensus 503 ---~~-~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~--~~~~L~~l~~~lgL~~~V 576 (694)
T PRK15179 503 ---TA-MMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGP--LLESVREFAQRLGMGERI 576 (694)
T ss_pred ---hH-HHHhhccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCc--chHHHHHHHHHcCCCCcE
Confidence 00 0111111122356799999999999999999999998865 689999999987 5677888888765 667
Q ss_pred EEEeecChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 460 RGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 460 ~~~~~~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
.+.+.. +.+..+|+.+|++++||.+|+||++++|||+||+|
T Consensus 577 ~flG~~--~dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~P 617 (694)
T PRK15179 577 LFTGLS--RRVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGVP 617 (694)
T ss_pred EEcCCc--chHHHHHHhcCEEEeccccccchHHHHHHHHcCCe
Confidence 777653 35678999999999999999999999999999998
No 52
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.92 E-value=3.2e-24 Score=218.35 Aligned_cols=295 Identities=19% Similarity=0.150 Sum_probs=197.8
Q ss_pred eEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceEE
Q 010752 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (502)
Q Consensus 86 kIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 165 (502)
||++++..+.|. ..||.+.++.+|+++|+++||+|+++++........+... .....
T Consensus 1 ~ili~~~~~~~~-~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~---------------------~~~~~- 57 (365)
T cd03809 1 RILIDARFLASR-RPTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPLR---------------------AALRL- 57 (365)
T ss_pred CEEEechhhhcC-CCCcHHHHHHHHHHHHHhcCCceEEEEecCccccccccch---------------------hcccc-
Confidence 689999988774 6899999999999999999999999998754333211000 00000
Q ss_pred EEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHHHH
Q 010752 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (502)
Q Consensus 166 ~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~~~ 245 (502)
...... .....++............. .++| |+|+|.+.....
T Consensus 58 -~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~------------~~~D-ii~~~~~~~~~~--- 99 (365)
T cd03809 58 -LLRLPR---------------------RLLWGLLFLLRAGDRLLLLL------------LGLD-LLHSPHNTAPLL--- 99 (365)
T ss_pred -cccccc---------------------ccccchhhHHHHHHHHHhhh------------cCCC-eeeecccccCcc---
Confidence 000000 00000111111111111111 1699 899997665544
Q ss_pred HHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccccCCH
Q 010752 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (502)
Q Consensus 246 lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (502)
+ ..++|+++++|+...... + ...... .......+++..+..+|.++++|+
T Consensus 100 -~--------~~~~~~i~~~hd~~~~~~-~----------~~~~~~----------~~~~~~~~~~~~~~~~d~~i~~s~ 149 (365)
T cd03809 100 -R--------LRGVPVVVTIHDLIPLRF-P----------EYFSPG----------FRRYFRRLLRRALRRADAIITVSE 149 (365)
T ss_pred -c--------CCCCCEEEEeccchhhhC-c----------ccCCHH----------HHHHHHHHHHHHHHHcCEEEEccH
Confidence 1 168999999997643110 0 000000 001223445677889999999999
Q ss_pred HHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCcEE
Q 010752 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (502)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p~i 405 (502)
..++.+.+ .++...+ ++.+++||+|...+.+..+ +. +..... ..+.++|
T Consensus 150 ~~~~~~~~--~~~~~~~------~~~vi~~~~~~~~~~~~~~--------------------~~-~~~~~~--~~~~~~i 198 (365)
T cd03809 150 ATKRDLLR--YLGVPPD------KIVVIPLGVDPRFRPPPAE--------------------AE-VLRALY--LLPRPYF 198 (365)
T ss_pred HHHHHHHH--HhCcCHH------HEEeeccccCccccCCCch--------------------HH-HHHHhc--CCCCCeE
Confidence 99999985 3443333 7899999999887765431 11 222222 2467799
Q ss_pred EEEcCcccccCHHHHHHHHhhcccC--CeEEEEEeCCChhhHHHHHHHHH-HCCCceEEEeecChHHHHHHHHhcCEEEE
Q 010752 406 GFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEI-LYPEKARGVAKFNIPLAHMIIAGADFILI 482 (502)
Q Consensus 406 ~~iGrl~~~KG~d~ll~Al~~L~~~--~v~lvivG~g~~~~~~~l~~l~~-~~~~~v~~~~~~~~~~~~~ila~ADi~l~ 482 (502)
+|+|++.+.||++.+++++.++.+. +++|+++|.+........+.+.. ...+++.+.+..+.+++..+++.||++++
T Consensus 199 ~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ 278 (365)
T cd03809 199 LYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVF 278 (365)
T ss_pred EEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhcc
Confidence 9999999999999999999999874 59999999876544443333321 23467888888888899999999999999
Q ss_pred cCCCCCCcHHHHHHHHcCCC
Q 010752 483 PSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 483 PS~~E~fglv~lEAma~G~P 502 (502)
||.+|++|++++|||++|+|
T Consensus 279 ps~~e~~~~~~~Ea~a~G~p 298 (365)
T cd03809 279 PSLYEGFGLPVLEAMACGTP 298 (365)
T ss_pred cchhccCCCCHHHHhcCCCc
Confidence 99999999999999999998
No 53
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.92 E-value=7.2e-23 Score=205.88 Aligned_cols=297 Identities=26% Similarity=0.357 Sum_probs=200.1
Q ss_pred eEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceEE
Q 010752 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (502)
Q Consensus 86 kIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 165 (502)
||++++..++|. .||.+.++..++++|.+.||+|.++++........+.. ......
T Consensus 1 kI~ii~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~----------------------~~~~~~ 56 (374)
T cd03801 1 KILLVTPEYPPS--VGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEV----------------------GGIVVV 56 (374)
T ss_pred CeeEEecccCCc--cCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeee----------------------cCccee
Confidence 699999988774 79999999999999999999999999865433221000 000000
Q ss_pred EEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHHHH
Q 010752 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (502)
Q Consensus 166 ~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~~~ 245 (502)
.. ... . . .................++. .++| +||+|.+........
T Consensus 57 ~~--~~~-~--------~----------~~~~~~~~~~~~~~~~~~~~------------~~~D-ii~~~~~~~~~~~~~ 102 (374)
T cd03801 57 RP--PPL-L--------R----------VRRLLLLLLLALRLRRLLRR------------ERFD-VVHAHDWLALLAAAL 102 (374)
T ss_pred cC--Ccc-c--------c----------cchhHHHHHHHHHHHHHhhh------------cCCc-EEEEechhHHHHHHH
Confidence 00 000 0 0 00000111112222222222 2699 899998777655543
Q ss_pred HHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccccCCH
Q 010752 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (502)
Q Consensus 246 lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (502)
+... .++|+++++|+......... ... .......+.+..+..+|.++++|+
T Consensus 103 ~~~~-------~~~~~i~~~h~~~~~~~~~~---------~~~-------------~~~~~~~~~~~~~~~~d~~i~~s~ 153 (374)
T cd03801 103 AARL-------LGIPLVLTVHGLEFGRPGNE---------LGL-------------LLKLARALERRALRRADRIIAVSE 153 (374)
T ss_pred HHHh-------cCCcEEEEeccchhhccccc---------hhH-------------HHHHHHHHHHHHHHhCCEEEEecH
Confidence 3322 68999999997654211100 000 000122344666889999999999
Q ss_pred HHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCcEE
Q 010752 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (502)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p~i 405 (502)
..++.+.+ .++...+ ++.+++||+|...+.+.. ++.+.... ...+.++|
T Consensus 154 ~~~~~~~~--~~~~~~~------~~~~i~~~~~~~~~~~~~---------------------~~~~~~~~--~~~~~~~i 202 (374)
T cd03801 154 ATREELRE--LGGVPPE------KITVIPNGVDTERFRPAP---------------------RAARRRLG--IPEDEPVI 202 (374)
T ss_pred HHHHHHHh--cCCCCCC------cEEEecCcccccccCccc---------------------hHHHhhcC--CcCCCeEE
Confidence 99999985 2333222 789999999988776531 11122222 22466799
Q ss_pred EEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHH--CCCceEEEeecChHHHHHHHHhcCEEE
Q 010752 406 GFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEIL--YPEKARGVAKFNIPLAHMIIAGADFIL 481 (502)
Q Consensus 406 ~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~--~~~~v~~~~~~~~~~~~~ila~ADi~l 481 (502)
+|+|++.+.||++.+++++..+.+ ++++|+++|.+. ..+.++++.++ .++++.+.+..+.+++..+|+.||+++
T Consensus 203 ~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i 280 (374)
T cd03801 203 LFVGRLVPRKGVDLLLEALAKLRKEYPDVRLVIVGDGP--LREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFV 280 (374)
T ss_pred EEecchhhhcCHHHHHHHHHHHhhhcCCeEEEEEeCcH--HHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEE
Confidence 999999999999999999999876 489999999765 45556665544 346788888888888999999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCC
Q 010752 482 IPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 482 ~PS~~E~fglv~lEAma~G~P 502 (502)
+||.+|++|++++|||++|+|
T Consensus 281 ~~~~~~~~~~~~~Ea~~~g~p 301 (374)
T cd03801 281 LPSLYEGFGLVLLEAMAAGLP 301 (374)
T ss_pred ecchhccccchHHHHHHcCCc
Confidence 999999999999999999998
No 54
>PLN02949 transferase, transferring glycosyl groups
Probab=99.92 E-value=3.7e-23 Score=220.12 Aligned_cols=154 Identities=13% Similarity=0.066 Sum_probs=122.5
Q ss_pred HHHHHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHH
Q 010752 311 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 390 (502)
Q Consensus 311 k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l 390 (502)
+.....+|.|+++|+++++.+.+ .++.+ .++.+++||+|...+....
T Consensus 215 ~~~~~~ad~ii~nS~~t~~~l~~--~~~~~-------~~i~vvyp~vd~~~~~~~~------------------------ 261 (463)
T PLN02949 215 GLVGRCAHLAMVNSSWTKSHIEA--LWRIP-------ERIKRVYPPCDTSGLQALP------------------------ 261 (463)
T ss_pred HHHcCCCCEEEECCHHHHHHHHH--HcCCC-------CCeEEEcCCCCHHHcccCC------------------------
Confidence 44457899999999999999874 12221 2678999999976553211
Q ss_pred HHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc------CCeEEEEEeCCC----hhhHHHHHHHHHHCC--Cc
Q 010752 391 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----KPMEKQLEQLEILYP--EK 458 (502)
Q Consensus 391 ~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~------~~v~lvivG~g~----~~~~~~l~~l~~~~~--~~ 458 (502)
.....+.++|+++||++++||++.+|+|+.++.+ ++++|+|+|++. .++.++++++.++++ ++
T Consensus 262 -----~~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~ 336 (463)
T PLN02949 262 -----LERSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGD 336 (463)
T ss_pred -----ccccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCc
Confidence 0111345789999999999999999999998653 479999999874 234466777777654 67
Q ss_pred eEEEeecChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 459 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 459 v~~~~~~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
+.+.+..+.+++..+|+.||++++||..|+||++++|||+||+|
T Consensus 337 V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~P 380 (463)
T PLN02949 337 VEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAV 380 (463)
T ss_pred EEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCc
Confidence 99999888889999999999999999999999999999999997
No 55
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.92 E-value=5.5e-23 Score=206.02 Aligned_cols=273 Identities=21% Similarity=0.179 Sum_probs=181.8
Q ss_pred eEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceEE
Q 010752 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (502)
Q Consensus 86 kIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 165 (502)
||++++..+.| .||.+.++..++++|+++||+|.++++.... ...+ ....++.+.
T Consensus 1 kI~i~~~~~~~---~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~-~~~~---------------------~~~~~~~~~ 55 (348)
T cd03820 1 KILFVIPSLGN---AGGAERVLSNLANALAEKGHEVTIISLDKGE-PPFY---------------------ELDPKIKVI 55 (348)
T ss_pred CeEEEeccccC---CCChHHHHHHHHHHHHhCCCeEEEEecCCCC-CCcc---------------------ccCCcccee
Confidence 69999988765 6999999999999999999999999876443 1100 011233333
Q ss_pred EEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHHHH
Q 010752 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (502)
Q Consensus 166 ~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~~~ 245 (502)
.++..... + .+ ........+.+.++. .+|| +|++|.+.. ..+
T Consensus 56 ~~~~~~~~-~--------~~-------------~~~~~~~~~~~~l~~------------~~~d-~i~~~~~~~---~~~ 97 (348)
T cd03820 56 DLGDKRDS-K--------LL-------------ARFKKLRRLRKLLKN------------NKPD-VVISFLTSL---LTF 97 (348)
T ss_pred eccccccc-c--------hh-------------ccccchHHHHHhhcc------------cCCC-EEEEcCchH---HHH
Confidence 22211000 0 00 000011222222222 2699 788887661 112
Q ss_pred HHHhccCCCCcCC-CeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccccCC
Q 010752 246 LKTMYKPKGMYKS-AKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (502)
Q Consensus 246 lk~~~~~~~~~~~-~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 324 (502)
+.... .+ +|++++.|+........ .......+..+..+|.++++|
T Consensus 98 ~~~~~------~~~~~~i~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~d~ii~~s 143 (348)
T cd03820 98 LASLG------LKIVKLIVSEHNSPDAYKKR----------------------------LRRLLLRRLLYRRADAVVVLT 143 (348)
T ss_pred HHHHh------hccccEEEecCCCccchhhh----------------------------hHHHHHHHHHHhcCCEEEEeC
Confidence 22211 23 48999999654211000 011123567788999999999
Q ss_pred HHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCcE
Q 010752 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (502)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p~ 404 (502)
+..+.... .... .++.+++||+|...+.+.. ..+.++
T Consensus 144 ~~~~~~~~-----~~~~------~~~~vi~~~~~~~~~~~~~--------------------------------~~~~~~ 180 (348)
T cd03820 144 EEDRALYY-----KKFN------KNVVVIPNPLPFPPEEPSS--------------------------------DLKSKR 180 (348)
T ss_pred HHHHHHhh-----ccCC------CCeEEecCCcChhhccccC--------------------------------CCCCcE
Confidence 99972222 1122 2789999999987654420 135679
Q ss_pred EEEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeecChHHHHHHHHhcCEE
Q 010752 405 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFI 480 (502)
Q Consensus 405 i~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~ila~ADi~ 480 (502)
++|+|++.+.||++.+++++.++.+ ++++|+++|.+. .++.++++..+++ .++.+.+. .+++..+|+.||++
T Consensus 181 i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~~ 256 (348)
T cd03820 181 ILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGP--EREALEALIKELGLEDRVILLGF--TKNIEEYYAKASIF 256 (348)
T ss_pred EEEEEeeccccCHHHHHHHHHHHHhcCCCeEEEEEeCCC--CHHHHHHHHHHcCCCCeEEEcCC--cchHHHHHHhCCEE
Confidence 9999999999999999999999974 689999999987 4455666666654 44555554 56788999999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCC
Q 010752 481 LIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 481 l~PS~~E~fglv~lEAma~G~P 502 (502)
++||.+|++|++++|||+||+|
T Consensus 257 i~ps~~e~~~~~~~Ea~a~G~P 278 (348)
T cd03820 257 VLTSRFEGFPMVLLEAMAFGLP 278 (348)
T ss_pred EeCccccccCHHHHHHHHcCCC
Confidence 9999999999999999999998
No 56
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.91 E-value=8.6e-23 Score=204.71 Aligned_cols=284 Identities=23% Similarity=0.253 Sum_probs=188.2
Q ss_pred eEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceEE
Q 010752 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (502)
Q Consensus 86 kIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 165 (502)
||++++..+. .||.+.++..++++|++.||+|.+++............. .. ......
T Consensus 1 kIl~~~~~~~----~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~~------------~~-------~~~~~~ 57 (353)
T cd03811 1 KILFVIPSLG----GGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLPS------------NV-------KLIPVR 57 (353)
T ss_pred CeEEEeeccc----CCCcchhHHHHHHHHHhcCceEEEEEcCCCCcccccccc------------ch-------hhhcee
Confidence 6899998754 599999999999999999999999987643322110000 00 000000
Q ss_pred EEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCC-ccchHHH
Q 010752 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDW-HTSLIPC 244 (502)
Q Consensus 166 ~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~-~t~~~~~ 244 (502)
.. ... .+ . .......+.+.++.. +|| +|++|.. .+.++..
T Consensus 58 ~~--~~~-----------~~--------~-----~~~~~~~~~~~~~~~------------~~d-ii~~~~~~~~~~~~~ 98 (353)
T cd03811 58 VL--KLK-----------SL--------R-----DLLAILRLRRLLRKE------------KPD-VVISHLTTTPNVLAL 98 (353)
T ss_pred ee--ecc-----------cc--------c-----chhHHHHHHHHHHhc------------CCC-EEEEcCccchhHHHH
Confidence 00 000 00 0 001122233333332 599 8888877 3343333
Q ss_pred HHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccccCC
Q 010752 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (502)
Q Consensus 245 ~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 324 (502)
+.+. .++|+++++|+......... . ......+..+..+|.++++|
T Consensus 99 ~~~~--------~~~~~i~~~~~~~~~~~~~~-----------~----------------~~~~~~~~~~~~~d~ii~~s 143 (353)
T cd03811 99 LAAR--------LGTKLIVWEHNSLSLELKRK-----------L----------------RLLLLIRKLYRRADKIVAVS 143 (353)
T ss_pred HHhh--------cCCceEEEEcCcchhhhccc-----------h----------------hHHHHHHhhccccceEEEec
Confidence 3322 26899999997653211000 0 00023456678999999999
Q ss_pred HHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCcE
Q 010752 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (502)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p~ 404 (502)
+..++.+.+ .++... .++.+|+||+|...+.+.... .. ..+ .+.+.++
T Consensus 144 ~~~~~~~~~--~~~~~~------~~~~vi~~~~~~~~~~~~~~~--------------------~~--~~~--~~~~~~~ 191 (353)
T cd03811 144 EGVKEDLLK--LLGIPP------DKIEVIYNPIDIEEIRALAEE--------------------PL--ELG--IPPDGPV 191 (353)
T ss_pred cchhhhHHH--hhcCCc------cccEEecCCcChhhcCcccch--------------------hh--hcC--CCCCceE
Confidence 999999885 233222 278999999999877664321 00 112 2346679
Q ss_pred EEEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeecChHHHHHHHHhcCEE
Q 010752 405 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFI 480 (502)
Q Consensus 405 i~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~ila~ADi~ 480 (502)
|+|+||+.+.||++.+++++.++.+ ++++|+++|.++ ..+.++++..+++ +++.+.+.. +.+..+++.||++
T Consensus 192 i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~~ 267 (353)
T cd03811 192 ILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGP--LREELEALAKELGLADRVHFLGFQ--SNPYPYLKAADLF 267 (353)
T ss_pred EEEEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCc--cHHHHHHHHHhcCCCccEEEeccc--CCHHHHHHhCCEE
Confidence 9999999999999999999999977 489999999887 4455556666554 456666653 3466899999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCC
Q 010752 481 LIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 481 l~PS~~E~fglv~lEAma~G~P 502 (502)
+.||.+|++|++++|||++|+|
T Consensus 268 i~ps~~e~~~~~~~Ea~~~G~P 289 (353)
T cd03811 268 VLSSRYEGFPNVLLEAMALGTP 289 (353)
T ss_pred EeCcccCCCCcHHHHHHHhCCC
Confidence 9999999999999999999998
No 57
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.91 E-value=8.2e-23 Score=208.09 Aligned_cols=282 Identities=21% Similarity=0.231 Sum_probs=180.6
Q ss_pred eEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceEE
Q 010752 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (502)
Q Consensus 86 kIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 165 (502)
||+||++. +| ..||.+.++..|+++|+++||+|.+++........ .... . ..+....
T Consensus 1 kI~~v~~~-~~--~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~--~~~~----------~--------~~~~~~~ 57 (366)
T cd03822 1 RIALVSPY-PP--RKCGIATFTTDLVNALSARGPDVLVVSVAALYPSL--LYGG----------E--------QEVVRVI 57 (366)
T ss_pred CeEEecCC-CC--CCCcHHHHHHHHHHHhhhcCCeEEEEEeecccCcc--cCCC----------c--------ccceeee
Confidence 79999875 45 37999999999999999999999999865322111 0000 0 0000000
Q ss_pred EEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccch---H
Q 010752 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSL---I 242 (502)
Q Consensus 166 ~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~---~ 242 (502)
. . + +... ...+.+.++. .+|| +||+|.|.+.. .
T Consensus 58 -~--~--------------~----------~~~~----~~~~~~~~~~------------~~~d-ii~~~~~~~~~~~~~ 93 (366)
T cd03822 58 -V--L--------------D----------NPLD----YRRAARAIRL------------SGPD-VVVIQHEYGIFGGEA 93 (366)
T ss_pred -e--c--------------C----------Cchh----HHHHHHHHhh------------cCCC-EEEEeeccccccchh
Confidence 0 0 0 0001 1112222222 2699 88888754322 1
Q ss_pred HHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCcccc
Q 010752 243 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 322 (502)
Q Consensus 243 ~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 322 (502)
...+.... ...++|+++++|+..... +.. ....+++..+..+|.+++
T Consensus 94 ~~~~~~~~----~~~~~~~i~~~h~~~~~~------------~~~-----------------~~~~~~~~~~~~~d~ii~ 140 (366)
T cd03822 94 GLYLLLLL----RGLGIPVVVTLHTVLLHE------------PRP-----------------GDRALLRLLLRRADAVIV 140 (366)
T ss_pred hHHHHHHH----hhcCCCEEEEEecCCccc------------cch-----------------hhhHHHHHHHhcCCEEEE
Confidence 22222110 015899999999761100 000 122344666788999999
Q ss_pred CCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCC
Q 010752 323 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 402 (502)
Q Consensus 323 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~ 402 (502)
+|....+++... .. ..++.+++||+|...+.+... . ++.+. ..+.
T Consensus 141 ~s~~~~~~~~~~--~~--------~~~~~~i~~~~~~~~~~~~~~----------------------~-~~~~~--~~~~ 185 (366)
T cd03822 141 MSSELLRALLLR--AY--------PEKIAVIPHGVPDPPAEPPES----------------------L-KALGG--LDGR 185 (366)
T ss_pred eeHHHHHHHHhh--cC--------CCcEEEeCCCCcCcccCCchh----------------------h-HhhcC--CCCC
Confidence 974444444320 11 238899999999876654320 0 12222 2467
Q ss_pred cEEEEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHH---HHHHH--CCCceEEEee-cChHHHHHHH
Q 010752 403 PVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLE---QLEIL--YPEKARGVAK-FNIPLAHMII 474 (502)
Q Consensus 403 p~i~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~---~l~~~--~~~~v~~~~~-~~~~~~~~il 474 (502)
++|+|+|++.+.||++.+++|+.++.+ ++++|+++|.+.+....... ++.++ ..+++.+.+. .+.+++..+|
T Consensus 186 ~~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~ 265 (366)
T cd03822 186 PVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELF 265 (366)
T ss_pred eEEEEEeeccCCCCHHHHHHHHHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHHH
Confidence 799999999999999999999999877 58999999988643222211 11223 3467888887 6778889999
Q ss_pred HhcCEEEEcCCCC--CCcHHHHHHHHcCCC
Q 010752 475 AGADFILIPSRFE--PCGLIQLHAMRYGTV 502 (502)
Q Consensus 475 a~ADi~l~PS~~E--~fglv~lEAma~G~P 502 (502)
+.||++++||.+| ++|++++|||+||+|
T Consensus 266 ~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~P 295 (366)
T cd03822 266 SAADVVVLPYRSADQTQSGVLAYAIGFGKP 295 (366)
T ss_pred hhcCEEEecccccccccchHHHHHHHcCCC
Confidence 9999999999999 999999999999998
No 58
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.91 E-value=3.3e-22 Score=201.27 Aligned_cols=285 Identities=19% Similarity=0.191 Sum_probs=188.7
Q ss_pred eEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceEE
Q 010752 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (502)
Q Consensus 86 kIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 165 (502)
||++|+.. .||.+.++..++++|.+.||+|+++++...... .....|+..+
T Consensus 1 kIl~i~~~------~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~-----------------------~~~~~~~~~~ 51 (359)
T cd03808 1 KILHIVTV------DGGLYSFRLPLIKALRAAGYEVHVVAPPGDELE-----------------------ELEALGVKVI 51 (359)
T ss_pred CeeEEEec------chhHHHHHHHHHHHHHhcCCeeEEEecCCCccc-----------------------ccccCCceEE
Confidence 68999975 489999999999999999999999987633211 1112355555
Q ss_pred EEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHHHH
Q 010752 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (502)
Q Consensus 166 ~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~~~ 245 (502)
.++...... +..+.......+.+.++. .+|| +||+|......+...
T Consensus 52 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~------------~~~d-vv~~~~~~~~~~~~~ 97 (359)
T cd03808 52 PIPLDRRGI---------------------NPFKDLKALLRLYRLLRK------------ERPD-IVHTHTPKPGILGRL 97 (359)
T ss_pred ecccccccc---------------------ChHhHHHHHHHHHHHHHh------------cCCC-EEEEccccchhHHHH
Confidence 443211000 000111111222233322 2699 899997776666555
Q ss_pred HHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccccCCH
Q 010752 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (502)
Q Consensus 246 lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (502)
.+... ...+++++.|+..+..... .. .........+..+..+|.++++|+
T Consensus 98 ~~~~~------~~~~~i~~~~~~~~~~~~~-----------~~-------------~~~~~~~~~~~~~~~~d~ii~~s~ 147 (359)
T cd03808 98 AARLA------GVPKVIYTVHGLGFVFTSG-----------GL-------------KRRLYLLLERLALRFTDKVIFQNE 147 (359)
T ss_pred HHHHc------CCCCEEEEecCcchhhccc-----------hh-------------HHHHHHHHHHHHHhhccEEEEcCH
Confidence 55422 5678888888664311100 00 000122233666788999999999
Q ss_pred HHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCcEE
Q 010752 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (502)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p~i 405 (502)
..++.+.+ .+... ....+.+++||+|.+.+.+.... ...+.++|
T Consensus 148 ~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~i 191 (359)
T cd03808 148 DDRDLALK---LGIIK----KKKTVLIPGSGVDLDRFSPSPEP-----------------------------IPEDDPVF 191 (359)
T ss_pred HHHHHHHH---hcCCC----cCceEEecCCCCChhhcCccccc-----------------------------cCCCCcEE
Confidence 99999885 22111 02267788999998877654310 12366799
Q ss_pred EEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHH--CCCceEEEeecChHHHHHHHHhcCEEE
Q 010752 406 GFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEIL--YPEKARGVAKFNIPLAHMIIAGADFIL 481 (502)
Q Consensus 406 ~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~--~~~~v~~~~~~~~~~~~~ila~ADi~l 481 (502)
+|+|++.+.||++.+++++..+.+ ++++|+++|.+......... +... ...++.+.+. .+++..+|+.||+++
T Consensus 192 ~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~-~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~i 268 (359)
T cd03808 192 LFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAIL-EIEKLGLEGRVEFLGF--RDDVPELLAAADVFV 268 (359)
T ss_pred EEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHH-HHHhcCCcceEEEeec--cccHHHHHHhccEEE
Confidence 999999999999999999999875 68999999998743222211 1222 2356777665 456778999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCC
Q 010752 482 IPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 482 ~PS~~E~fglv~lEAma~G~P 502 (502)
+||.+|+||++++|||+||+|
T Consensus 269 ~ps~~e~~~~~~~Ea~~~G~P 289 (359)
T cd03808 269 LPSYREGLPRVLLEAMAMGRP 289 (359)
T ss_pred ecCcccCcchHHHHHHHcCCC
Confidence 999999999999999999998
No 59
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.91 E-value=3.7e-22 Score=201.63 Aligned_cols=299 Identities=24% Similarity=0.287 Sum_probs=198.0
Q ss_pred EEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceEEE
Q 010752 87 ILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVF 166 (502)
Q Consensus 87 Il~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~ 166 (502)
|++++..++|. ..||.+.++..++++|.+.||+|+++++............... .......
T Consensus 1 iLii~~~~p~~-~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~-----------------~~~~~~~- 61 (377)
T cd03798 1 ILVISSLYPPP-NNGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLKGRL-----------------VGVERLP- 61 (377)
T ss_pred CeEeccCCCCC-CCchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhhccccc-----------------ccccccc-
Confidence 68888877662 3699999999999999999999999997643322210000000 0000000
Q ss_pred EeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCcc-chHHHH
Q 010752 167 VDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT-SLIPCY 245 (502)
Q Consensus 167 i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t-~~~~~~ 245 (502)
....... ..........+...+...++.. .+++| +||+|.... ..+...
T Consensus 62 --~~~~~~~-----------------~~~~~~~~~~~~~~~~~~l~~~----------~~~~d-ii~~~~~~~~~~~~~~ 111 (377)
T cd03798 62 --VLLPVVP-----------------LLKGPLLYLLAARALLKLLKLK----------RFRPD-LIHAHFAYPDGFAAAL 111 (377)
T ss_pred --cCcchhh-----------------ccccchhHHHHHHHHHHHHhcc----------cCCCC-EEEEeccchHHHHHHH
Confidence 0000000 0001112223334444444311 12699 788884333 334444
Q ss_pred HHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccccCCH
Q 010752 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (502)
Q Consensus 246 lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (502)
+... .++|+++++|+...... .. .......++..+..+|.++++|+
T Consensus 112 ~~~~-------~~~~~i~~~h~~~~~~~-~~--------------------------~~~~~~~~~~~~~~~d~ii~~s~ 157 (377)
T cd03798 112 LKRK-------LGIPLVVTLHGSDVNLL-PR--------------------------KRLLRALLRRALRRADAVIAVSE 157 (377)
T ss_pred HHHh-------cCCCEEEEeecchhccc-Cc--------------------------hhhHHHHHHHHHhcCCeEEeCCH
Confidence 4432 46899999997653110 00 00123445667889999999999
Q ss_pred HHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCcEE
Q 010752 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (502)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p~i 405 (502)
..++.+.+ .+.. ..++.+++||+|...+.+.... .. .+.+. +.+.++|
T Consensus 158 ~~~~~~~~---~~~~------~~~~~~i~~~~~~~~~~~~~~~-------------------~~--~~~~~--~~~~~~i 205 (377)
T cd03798 158 ALADELKA---LGID------PEKVTVIPNGVDTERFSPADRA-------------------EA--RKLGL--PEDKKVI 205 (377)
T ss_pred HHHHHHHH---hcCC------CCceEEcCCCcCcccCCCcchH-------------------HH--HhccC--CCCceEE
Confidence 99999885 1122 2389999999999888765321 00 22222 3466799
Q ss_pred EEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHC--CCceEEEeecChHHHHHHHHhcCEEE
Q 010752 406 GFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFIL 481 (502)
Q Consensus 406 ~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~ila~ADi~l 481 (502)
+++|++.+.||++.+++++..+.+ ++++++++|.+. ..+.++++.+.. .+++.+.+..+.+++..+++.||+++
T Consensus 206 ~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i 283 (377)
T cd03798 206 LFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGP--LREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFV 283 (377)
T ss_pred EEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCc--chHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCeee
Confidence 999999999999999999999876 489999999886 345566665543 35788888888888999999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCC
Q 010752 482 IPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 482 ~PS~~E~fglv~lEAma~G~P 502 (502)
+||.+|++|++++|||++|+|
T Consensus 284 ~~~~~~~~~~~~~Ea~~~G~p 304 (377)
T cd03798 284 LPSLREGFGLVLLEAMACGLP 304 (377)
T ss_pred cchhhccCChHHHHHHhcCCC
Confidence 999999999999999999998
No 60
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.91 E-value=2.7e-22 Score=212.77 Aligned_cols=156 Identities=12% Similarity=0.118 Sum_probs=122.1
Q ss_pred hcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhC
Q 010752 316 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 395 (502)
Q Consensus 316 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~g 395 (502)
.+| ++++|....+.+.+ .++++.+ ++.+|+||+|...|.|..+. ....+..+.
T Consensus 339 ~sd-~v~~s~~v~~~l~~--~lgip~~------KI~VIyNGVD~~rf~p~~~~------------------~~~~r~~~~ 391 (578)
T PRK15490 339 GVD-FMSNNHCVTRHYAD--WLKLEAK------HFQVVYNGVLPPSTEPSSEV------------------PHKIWQQFT 391 (578)
T ss_pred cch-hhhccHHHHHHHHH--HhCCCHH------HEEEEeCCcchhhcCccchh------------------hHHHHHHhh
Confidence 344 77889988888874 4566666 89999999999988775321 011222222
Q ss_pred CCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeecChHHHH
Q 010752 396 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAH 471 (502)
Q Consensus 396 l~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~ 471 (502)
....++.++|+++||+.++||.+.+++++.++.+ ++++|+|+|+|+ .++.++++.++++ +++.+.+. .+++.
T Consensus 392 ~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIVGdG~--~~eeLk~la~elgL~d~V~FlG~--~~Dv~ 467 (578)
T PRK15490 392 QKTQDADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVGDGD--LRAEAQKRAEQLGILERILFVGA--SRDVG 467 (578)
T ss_pred hccCCCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEEeCch--hHHHHHHHHHHcCCCCcEEECCC--hhhHH
Confidence 2112356799999999999999999999988765 689999999987 5677888877765 66777775 34577
Q ss_pred HHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 472 MIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 472 ~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
.+|+.+|++++||.+|+||++++|||+||+|
T Consensus 468 ~~LaaADVfVlPS~~EGfp~vlLEAMA~GlP 498 (578)
T PRK15490 468 YWLQKMNVFILFSRYEGLPNVLIEAQMVGVP 498 (578)
T ss_pred HHHHhCCEEEEcccccCccHHHHHHHHhCCC
Confidence 8999999999999999999999999999998
No 61
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.90 E-value=1.5e-22 Score=216.96 Aligned_cols=144 Identities=16% Similarity=0.135 Sum_probs=111.4
Q ss_pred cCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCC
Q 010752 317 SDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGL 396 (502)
Q Consensus 317 ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl 396 (502)
||.|+++|..+. .+.. .+....||||++.|.|... .+.++++|+
T Consensus 499 cD~VIaPS~atq-~L~~---------------~vI~nVnGVDte~F~P~~r--------------------~~~~r~lgi 542 (794)
T PLN02501 499 CHKVLRLSAATQ-DLPK---------------SVICNVHGVNPKFLKIGEK--------------------VAEERELGQ 542 (794)
T ss_pred CCEEEcCCHHHH-Hhcc---------------cceeecccccccccCCcch--------------------hHHHHhcCC
Confidence 899999997777 3321 1222337999999988641 122245665
Q ss_pred CCCCCCcEEEEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHH
Q 010752 397 PVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 474 (502)
Q Consensus 397 ~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~il 474 (502)
+. ..+.++|+||+.++||++.|++|++++.+ ++++|+|+|+|+ .++.++++..+++.++.+.+.. +....+|
T Consensus 543 ~~--~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP--~reeLe~la~eLgL~V~FLG~~--dd~~~ly 616 (794)
T PLN02501 543 QA--FSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGE--DAHEVQRAAKRLDLNLNFLKGR--DHADDSL 616 (794)
T ss_pred cc--ccCceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCc--cHHHHHHHHHHcCCEEEecCCC--CCHHHHH
Confidence 43 23468999999999999999999998865 589999999998 5677888887776556555442 3345799
Q ss_pred HhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 475 AGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 475 a~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
+.+|+||+||.+|+||++++||||||+|
T Consensus 617 asaDVFVlPS~sEgFGlVlLEAMA~GlP 644 (794)
T PLN02501 617 HGYKVFINPSISDVLCTATAEALAMGKF 644 (794)
T ss_pred HhCCEEEECCCcccchHHHHHHHHcCCC
Confidence 9999999999999999999999999998
No 62
>PLN02275 transferase, transferring glycosyl groups
Probab=99.90 E-value=2.8e-21 Score=200.97 Aligned_cols=208 Identities=15% Similarity=0.102 Sum_probs=142.7
Q ss_pred CCCEEEEEcCCcc---chHHHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcc
Q 010752 227 GEDVVFVANDWHT---SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVR 303 (502)
Q Consensus 227 ~pDvVih~h~~~t---~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~ 303 (502)
+|| |||+|.... .+.+.+++.. .++|+++++|+..+. ... .+.... +..
T Consensus 100 ~~D-vV~~~~~~~~~~~~~~~~~~~~-------~~~p~v~~~h~~~~~-~~~------~~~~~~-------------~~~ 151 (371)
T PLN02275 100 RPD-VFLVQNPPSVPTLAVVKLACWL-------RRAKFVIDWHNFGYT-LLA------LSLGRS-------------HPL 151 (371)
T ss_pred CCC-EEEEeCCCCcHHHHHHHHHHHH-------hCCCEEEEcCCccHH-HHh------cccCCC-------------CHH
Confidence 799 899986443 2233333332 578999999975310 000 000000 000
Q ss_pred cchHHHH-HHHHHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccc
Q 010752 304 GRKINWM-KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDA 382 (502)
Q Consensus 304 ~~~~~~~-k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~ 382 (502)
.+...++ +..++.+|.++++|+..++.+.+ .+|+ ++.+|+||. .+.|.|....
T Consensus 152 ~~~~~~~e~~~~~~ad~ii~~S~~~~~~l~~--~~g~---------~i~vi~n~~-~~~f~~~~~~-------------- 205 (371)
T PLN02275 152 VRLYRWYERHYGKMADGHLCVTKAMQHELDQ--NWGI---------RATVLYDQP-PEFFRPASLE-------------- 205 (371)
T ss_pred HHHHHHHHHHHHhhCCEEEECCHHHHHHHHH--hcCC---------CeEEECCCC-HHHcCcCCch--------------
Confidence 1233333 66678899999999999999874 2232 268999984 4666654310
Q ss_pred hHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhcc-------------------cCCeEEEEEeCCChh
Q 010752 383 KPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI-------------------KENVQIIVLGTGKKP 443 (502)
Q Consensus 383 k~~~k~~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~-------------------~~~v~lvivG~g~~~ 443 (502)
.. .. .+...+++++||+.++||++.+++|+..+. .++++|+++|+|+
T Consensus 206 ---------~~--~~-~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~-- 271 (371)
T PLN02275 206 ---------IR--LR-PNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGP-- 271 (371)
T ss_pred ---------hc--cc-CCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCC--
Confidence 00 11 123347889999999999999999998872 2589999999998
Q ss_pred hHHHHHHHHHHCC-CceEEEee-cChHHHHHHHHhcCEEEEcC--C-CCCCcHHHHHHHHcCCC
Q 010752 444 MEKQLEQLEILYP-EKARGVAK-FNIPLAHMIIAGADFILIPS--R-FEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 444 ~~~~l~~l~~~~~-~~v~~~~~-~~~~~~~~ila~ADi~l~PS--~-~E~fglv~lEAma~G~P 502 (502)
.++.++++.++++ +++.+.+. .+.+++..+|+.||++++|+ . .|++|++++|||+||+|
T Consensus 272 ~~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~P 335 (371)
T PLN02275 272 QKAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLP 335 (371)
T ss_pred CHHHHHHHHHHcCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCC
Confidence 5677888877765 45777664 57788999999999999863 3 38999999999999998
No 63
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.89 E-value=2.6e-22 Score=215.29 Aligned_cols=216 Identities=19% Similarity=0.235 Sum_probs=155.6
Q ss_pred CCCEEEEEcCCc-cchHHHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccc
Q 010752 227 GEDVVFVANDWH-TSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 305 (502)
Q Consensus 227 ~pDvVih~h~~~-t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~ 305 (502)
++| |+|+|... .+++++.++.. .++|+++|.|+.....+.. ++ .... +.....+..+.+
T Consensus 173 ~~d-viH~~s~~~~g~~~~~~~~~-------~~~p~I~t~Hg~~~~e~~~--~~--~~~~--------~~~~~~~~~~~~ 232 (475)
T cd03813 173 KAD-VYHAVSTGYAGLLGALAKAR-------RGTPFLLTEHGIYTRERKI--EL--LQAD--------WEMSYFRRLWIR 232 (475)
T ss_pred CCC-EEeccCcchHHHHHHHHHHH-------hCCCEEEecCCccHHHHHH--HH--Hhcc--------cchHHHHHHHHH
Confidence 579 99999643 35555555554 5899999999764211100 00 0000 000000000111
Q ss_pred hHH-HHHHHHHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchH
Q 010752 306 KIN-WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKP 384 (502)
Q Consensus 306 ~~~-~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~ 384 (502)
... +.+..+..||.|+++|+..++.+.+ +|.+.+ ++.+||||+|.+.|.+....
T Consensus 233 ~~~~l~~~~~~~ad~Ii~~s~~~~~~~~~---~g~~~~------ki~vIpNgid~~~f~~~~~~---------------- 287 (475)
T cd03813 233 FFESLGRLAYQAADRITTLYEGNRERQIE---DGADPE------KIRVIPNGIDPERFAPARRA---------------- 287 (475)
T ss_pred HHHHHHHHHHHhCCEEEecCHHHHHHHHH---cCCCHH------HeEEeCCCcCHHHcCCcccc----------------
Confidence 122 2356778999999999999887763 566655 88999999999888764310
Q ss_pred HHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCC--hhhHHHHHHHHHHCC--Cc
Q 010752 385 LLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK--KPMEKQLEQLEILYP--EK 458 (502)
Q Consensus 385 ~~k~~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~--~~~~~~l~~l~~~~~--~~ 458 (502)
....+.++|+|+||+.+.||++.+++|+..+.+ ++++++|+|.++ +.+.++++++.++++ ++
T Consensus 288 ------------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~~ 355 (475)
T cd03813 288 ------------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESLGLEDN 355 (475)
T ss_pred ------------ccCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCcChHHHHHHHHHHHHhCCCCe
Confidence 012467799999999999999999999999876 689999999984 356777888887765 57
Q ss_pred eEEEeecChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 459 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 459 v~~~~~~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
|.+.+ .+.+..+|+.+|++++||..|+||++++|||+||+|
T Consensus 356 V~f~G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~P 396 (475)
T cd03813 356 VKFTG---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGIP 396 (475)
T ss_pred EEEcC---CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCCC
Confidence 88877 445678999999999999999999999999999998
No 64
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.88 E-value=1.5e-21 Score=200.35 Aligned_cols=141 Identities=20% Similarity=0.245 Sum_probs=117.8
Q ss_pred HHHHHHHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHH
Q 010752 309 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 388 (502)
Q Consensus 309 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~ 388 (502)
+.+..+..+|.++++|+..++.+.+ .++. +..+|+||+|.+.|.+..
T Consensus 146 ~~~~~~~~~d~ii~~S~~~~~~~~~--~~~~---------~~~vi~~~~d~~~~~~~~---------------------- 192 (351)
T cd03804 146 WDRRSAARVDYFIANSRFVARRIKK--YYGR---------DATVIYPPVDTDRFTPAE---------------------- 192 (351)
T ss_pred HHHHHhcCCCEEEECCHHHHHHHHH--HhCC---------CcEEECCCCCHhhcCcCC----------------------
Confidence 3455678999999999999999874 1221 457899999998876532
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChH
Q 010752 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIP 468 (502)
Q Consensus 389 ~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~ 468 (502)
...+.++|+||+.+.||++.+++|+.++. ++|+++|+|+ .++.+++ ...++|.+.+..+.+
T Consensus 193 -----------~~~~~il~~G~~~~~K~~~~li~a~~~~~---~~l~ivG~g~--~~~~l~~---~~~~~V~~~g~~~~~ 253 (351)
T cd03804 193 -----------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG---KRLVVIGDGP--ELDRLRA---KAGPNVTFLGRVSDE 253 (351)
T ss_pred -----------CCCCEEEEEEcCccccChHHHHHHHHHCC---CcEEEEECCh--hHHHHHh---hcCCCEEEecCCCHH
Confidence 13457999999999999999999999883 8999999987 3344444 456789999999999
Q ss_pred HHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 469 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 469 ~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
++..+|+.||++++||. |+||++++|||+||+|
T Consensus 254 ~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~P 286 (351)
T cd03804 254 ELRDLYARARAFLFPAE-EDFGIVPVEAMASGTP 286 (351)
T ss_pred HHHHHHHhCCEEEECCc-CCCCchHHHHHHcCCC
Confidence 99999999999999999 9999999999999998
No 65
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.88 E-value=4.4e-22 Score=208.58 Aligned_cols=153 Identities=17% Similarity=0.133 Sum_probs=116.2
Q ss_pred HHHHHHHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHH
Q 010752 309 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 388 (502)
Q Consensus 309 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~ 388 (502)
+.+..+..+|.++++|+..++.+.+ ..+... .++.+||||+|.+.|.|....
T Consensus 165 ~e~~~~~~ad~vi~~S~~~~~~l~~--~~~~~~------~~v~vipngvd~~~f~~~~~~-------------------- 216 (397)
T TIGR03087 165 YERAIAARFDAATFVSRAEAELFRR--LAPEAA------GRITAFPNGVDADFFSPDRDY-------------------- 216 (397)
T ss_pred HHHHHHhhCCeEEEcCHHHHHHHHH--hCCCCC------CCeEEeecccchhhcCCCccc--------------------
Confidence 4466788999999999999999874 122222 278999999999988764311
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCHHHHH----HHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEE
Q 010752 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILA----AAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV 462 (502)
Q Consensus 389 ~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll----~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~ 462 (502)
. .+..++.++|+|+||+.+.||++.++ ++++.+.+ ++++|+|+|+|+. +.++++.. ..++.+.
T Consensus 217 ----~--~~~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~---~~~~~l~~--~~~V~~~ 285 (397)
T TIGR03087 217 ----P--NPYPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS---PAVRALAA--LPGVTVT 285 (397)
T ss_pred ----c--CCCCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh---HHHHHhcc--CCCeEEe
Confidence 0 00113557999999999999999887 45555544 6899999999873 23444432 2458888
Q ss_pred eecChHHHHHHHHhcCEEEEcCCC-CCCcHHHHHHHHcCCC
Q 010752 463 AKFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTV 502 (502)
Q Consensus 463 ~~~~~~~~~~ila~ADi~l~PS~~-E~fglv~lEAma~G~P 502 (502)
+..+ ++..+|+.||++++||.+ |++|++++|||+||+|
T Consensus 286 G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~P 324 (397)
T TIGR03087 286 GSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKP 324 (397)
T ss_pred eecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcCCC
Confidence 8765 456899999999999986 9999999999999998
No 66
>PHA01633 putative glycosyl transferase group 1
Probab=99.87 E-value=3.4e-20 Score=188.57 Aligned_cols=157 Identities=19% Similarity=0.300 Sum_probs=119.1
Q ss_pred HHHHHHHHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHH
Q 010752 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (502)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k 387 (502)
++....+...+.+|++|+..++.+.+ .|++. . ..|+||+|++.|.|..+ ..
T Consensus 84 ~~y~~~m~~~~~vIavS~~t~~~L~~---~G~~~-------~-i~I~~GVD~~~f~p~~~------------------~~ 134 (335)
T PHA01633 84 EIVNKYLLQDVKFIPNSKFSAENLQE---VGLQV-------D-LPVFHGINFKIVENAEK------------------LV 134 (335)
T ss_pred HHHHHHHhcCCEEEeCCHHHHHHHHH---hCCCC-------c-eeeeCCCChhhcCccch------------------hh
Confidence 44445566788999999999999985 35443 2 34789999998877531 12
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc--C----CeEEEEEeCCChhhHHHHHHHHHHCCCceEE
Q 010752 388 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGKKPMEKQLEQLEILYPEKARG 461 (502)
Q Consensus 388 ~~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~--~----~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~ 461 (502)
.+++++++... ++.++|+++||+.++||++.+++|++++.+ + +++++++|.+ .++++ .+++++.+
T Consensus 135 ~~~r~~~~~~~-~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~------~~~~l--~l~~~V~f 205 (335)
T PHA01633 135 PQLKQKLDKDF-PDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK------QFTQL--EVPANVHF 205 (335)
T ss_pred HHHHHHhCcCC-CCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH------HHHHc--CCCCcEEE
Confidence 34556665432 366799999999999999999999999875 2 4678887732 23322 24567888
Q ss_pred Eeec---ChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 462 VAKF---NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 462 ~~~~---~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
.+.+ +.+++..+|++||++|+||.+|+||++++|||+||+|
T Consensus 206 ~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~P 249 (335)
T PHA01633 206 VAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTP 249 (335)
T ss_pred EecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCCC
Confidence 7543 4677889999999999999999999999999999998
No 67
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.83 E-value=3e-20 Score=198.31 Aligned_cols=224 Identities=18% Similarity=0.233 Sum_probs=150.2
Q ss_pred CCEEEEEcCCccchHHHHHHHhccCCCCcCCCeEEEEEecCcccccccccc-ccccCCCcccccccccccCCCCCcccch
Q 010752 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (502)
Q Consensus 228 pDvVih~h~~~t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~-~~~l~lp~~~~~~~~~~~~~~~~~~~~~ 306 (502)
.| +|+.||+|..++|.++++.. .+.|++|..|.. |+... +..+ | .
T Consensus 132 ~d-~iwihDyhl~llp~~lr~~~------~~~~i~~f~Hip-----fP~~e~~~~l--p--------------------~ 177 (460)
T cd03788 132 GD-LVWVHDYHLLLLPQMLRERG------PDARIGFFLHIP-----FPSSEIFRCL--P--------------------W 177 (460)
T ss_pred CC-EEEEeChhhhHHHHHHHhhC------CCCeEEEEEeCC-----CCChHHHhhC--C--------------------C
Confidence 46 99999999999999998765 678999999933 12111 1111 1 1
Q ss_pred HHHHHHHHHhcCccccCCHHHHHHHHcCCC--CCCc------chhhhccccEEEeeCCCcCCCCCCCcccccccccCcch
Q 010752 307 INWMKAGILESDMVLTVSPHYAQELVSGED--KGVE------LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 378 (502)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~------~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~ 378 (502)
...+-.++..+|.|.+.+..+.+.+.+.-. .+.. .+..-+..++.++|||||++.|.+...
T Consensus 178 ~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~----------- 246 (460)
T cd03788 178 REELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAA----------- 246 (460)
T ss_pred hHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhc-----------
Confidence 123334567799999999877766553110 0100 000012246899999999988866431
Q ss_pred hccchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc--CC----eEEEEEeCCC-------hhhH
Q 010752 379 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN----VQIIVLGTGK-------KPME 445 (502)
Q Consensus 379 ~~~~k~~~k~~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~--~~----v~lvivG~g~-------~~~~ 445 (502)
.+..++.+++..+.. ++.++|+++||+.+.||++.+++|++++.+ ++ ++|+++|.+. ..++
T Consensus 247 ----~~~~~~~~~~~~~~~--~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~ 320 (460)
T cd03788 247 ----SPEVQERAAELRERL--GGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELR 320 (460)
T ss_pred ----CchhHHHHHHHHHhc--CCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHH
Confidence 111222233333322 367899999999999999999999999865 33 6788887532 1244
Q ss_pred HHHHHHHHHCC--------CceEEEe-ecChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 446 KQLEQLEILYP--------EKARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 446 ~~l~~l~~~~~--------~~v~~~~-~~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
++++++..+.+ ..+.+.. ..+.+++..+|+.||++++||..|+||++++|||+||+|
T Consensus 321 ~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p 386 (460)
T cd03788 321 REVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDD 386 (460)
T ss_pred HHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecC
Confidence 55555544422 1244443 447788889999999999999999999999999999997
No 68
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.83 E-value=1.7e-19 Score=191.72 Aligned_cols=226 Identities=19% Similarity=0.218 Sum_probs=154.1
Q ss_pred CCCEEEEEcCCccchHHHHHHHhccCCCCcCCCeEEEEEecCcccccccccc-ccccCCCcccccccccccCCCCCcccc
Q 010752 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGR 305 (502)
Q Consensus 227 ~pDvVih~h~~~t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~-~~~l~lp~~~~~~~~~~~~~~~~~~~~ 305 (502)
++|.+|.+||+|-.++|.++++.. .+.++.|..| +. ||..+ |..+ |
T Consensus 126 ~~~d~vwvhDYhl~l~p~~lr~~~------~~~~igfFlH-ip----fP~~e~f~~l--p-------------------- 172 (456)
T TIGR02400 126 QPGDIVWVHDYHLMLLPAMLRELG------VQNKIGFFLH-IP----FPSSEIYRTL--P-------------------- 172 (456)
T ss_pred CCCCEEEEecchhhHHHHHHHhhC------CCCeEEEEEe-CC----CCChHHHhhC--C--------------------
Confidence 343399999999999999999875 6789999999 32 22211 1111 1
Q ss_pred hHHHHHHHHHhcCccccCCHHHHHHHHcCCC--CCCcch--h---hhccccEEEeeCCCcCCCCCCCcccccccccCcch
Q 010752 306 KINWMKAGILESDMVLTVSPHYAQELVSGED--KGVELD--N---IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 378 (502)
Q Consensus 306 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~--~---~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~ 378 (502)
....+-.++..||.|.+.++.+++.+.+... .|.+.. . .-+..++.++|||+|++.|.+....
T Consensus 173 ~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~---------- 242 (456)
T TIGR02400 173 WRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKK---------- 242 (456)
T ss_pred cHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcC----------
Confidence 1133455688999999999999998775211 121110 0 1233578899999999998764311
Q ss_pred hccchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc--C----CeEEEEEeC-----CCh--hhH
Q 010752 379 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGT-----GKK--PME 445 (502)
Q Consensus 379 ~~~~k~~~k~~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~--~----~v~lvivG~-----g~~--~~~ 445 (502)
....+..++++++++ +.++|+++||+++.||++.+++|++++.+ + ++.|+++|. ++. .++
T Consensus 243 --~~~~~~~~~lr~~~~-----~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~ 315 (456)
T TIGR02400 243 --PSVQKRIAELRESLK-----GRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLR 315 (456)
T ss_pred --hhHHHHHHHHHHHcC-----CCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHHHHH
Confidence 011112234566653 66799999999999999999999999865 3 366887752 221 233
Q ss_pred HHHHHHHHHCCC---c-----eEEEe-ecChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 446 KQLEQLEILYPE---K-----ARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 446 ~~l~~l~~~~~~---~-----v~~~~-~~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
++++++..+.++ . +.+.. ..+.+++.++|+.||++++||..|+||++++||||||+|
T Consensus 316 ~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P 381 (456)
T TIGR02400 316 RQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDP 381 (456)
T ss_pred HHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCC
Confidence 445554332111 1 23322 346788889999999999999999999999999999997
No 69
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.83 E-value=2.3e-18 Score=177.68 Aligned_cols=272 Identities=17% Similarity=0.053 Sum_probs=170.8
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v 164 (502)
|||++++. ..||...+..+|+++|.++||+|.+++........ .....|+++
T Consensus 2 ~~i~i~~~------g~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~~----------------------~~~~~g~~~ 53 (357)
T PRK00726 2 KKILLAGG------GTGGHVFPALALAEELKKRGWEVLYLGTARGMEAR----------------------LVPKAGIEF 53 (357)
T ss_pred cEEEEEcC------cchHhhhHHHHHHHHHHhCCCEEEEEECCCchhhh----------------------ccccCCCcE
Confidence 89999986 35888888899999999999999999864311010 011147777
Q ss_pred EEEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHHH
Q 010752 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (502)
Q Consensus 165 ~~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~~ 244 (502)
+.++.+..... . ..........+...+..+.+.+.. ++|| |||+|.+.+++.+.
T Consensus 54 ~~~~~~~~~~~-------~---------~~~~l~~~~~~~~~~~~~~~~ik~---------~~pD-vv~~~~~~~~~~~~ 107 (357)
T PRK00726 54 HFIPSGGLRRK-------G---------SLANLKAPFKLLKGVLQARKILKR---------FKPD-VVVGFGGYVSGPGG 107 (357)
T ss_pred EEEeccCcCCC-------C---------hHHHHHHHHHHHHHHHHHHHHHHh---------cCCC-EEEECCCcchhHHH
Confidence 77754422111 0 000111111222333333333321 2699 99999988776655
Q ss_pred HHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccccCC
Q 010752 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (502)
Q Consensus 245 ~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 324 (502)
.++.. .++|++++.|+... .... +.....+|.+++++
T Consensus 108 ~~~~~-------~~~p~v~~~~~~~~---------------------------------~~~~---r~~~~~~d~ii~~~ 144 (357)
T PRK00726 108 LAARL-------LGIPLVIHEQNAVP---------------------------------GLAN---KLLARFAKKVATAF 144 (357)
T ss_pred HHHHH-------cCCCEEEEcCCCCc---------------------------------cHHH---HHHHHHhchheECc
Confidence 54433 57899987663210 0111 22356799999998
Q ss_pred HHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCcE
Q 010752 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (502)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p~ 404 (502)
+....+ .+. .++++++||+|.+.+.+.. .+.+++++ ++.++
T Consensus 145 ~~~~~~--------~~~------~~i~vi~n~v~~~~~~~~~-----------------------~~~~~~~~--~~~~~ 185 (357)
T PRK00726 145 PGAFPE--------FFK------PKAVVTGNPVREEILALAA-----------------------PPARLAGR--EGKPT 185 (357)
T ss_pred hhhhhc--------cCC------CCEEEECCCCChHhhcccc-----------------------hhhhccCC--CCCeE
Confidence 743211 222 3899999999987654321 01233433 46678
Q ss_pred EEEEcCcccccCHHHHH-HHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCEEEEc
Q 010752 405 IGFIGRLEEQKGSDILA-AAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIP 483 (502)
Q Consensus 405 i~~iGrl~~~KG~d~ll-~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi~l~P 483 (502)
|+++|+....|+...++ +|++++.+....++++|.|. .++..+.+ + .+.++.+.+.. +.+..+|+.||+++.+
T Consensus 186 i~~~gg~~~~~~~~~~l~~a~~~~~~~~~~~~~~G~g~--~~~~~~~~-~-~~~~v~~~g~~--~~~~~~~~~~d~~i~~ 259 (357)
T PRK00726 186 LLVVGGSQGARVLNEAVPEALALLPEALQVIHQTGKGD--LEEVRAAY-A-AGINAEVVPFI--DDMAAAYAAADLVICR 259 (357)
T ss_pred EEEECCcHhHHHHHHHHHHHHHHhhhCcEEEEEcCCCc--HHHHHHHh-h-cCCcEEEeehH--hhHHHHHHhCCEEEEC
Confidence 99999988888865555 99988855334567789886 34444444 3 55445555443 5677899999999998
Q ss_pred CCCCCCcHHHHHHHHcCCC
Q 010752 484 SRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 484 S~~E~fglv~lEAma~G~P 502 (502)
|- +.+++|||++|+|
T Consensus 260 ~g----~~~~~Ea~~~g~P 274 (357)
T PRK00726 260 AG----ASTVAELAAAGLP 274 (357)
T ss_pred CC----HHHHHHHHHhCCC
Confidence 73 6899999999998
No 70
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.82 E-value=3.5e-19 Score=191.44 Aligned_cols=146 Identities=18% Similarity=0.080 Sum_probs=114.2
Q ss_pred HHhcCccccCCHHHHHHHHcC-CCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHH
Q 010752 314 ILESDMVLTVSPHYAQELVSG-EDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 392 (502)
Q Consensus 314 ~~~ad~vi~vS~~~~~~l~~~-~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~ 392 (502)
+..+|.++++|+..++.+.+. ..++.. ..++.+||||++...+.|..
T Consensus 268 ~~~~D~iI~~S~~~~~~l~~~~~~~~~~------~~ki~viP~g~~~~~~~~~~-------------------------- 315 (500)
T TIGR02918 268 ADYIDFFITATDIQNQILKNQFKKYYNI------EPRIYTIPVGSLDELQYPEQ-------------------------- 315 (500)
T ss_pred hhhCCEEEECCHHHHHHHHHHhhhhcCC------CCcEEEEcCCCcccccCccc--------------------------
Confidence 567899999999998887741 111111 23789999998654333211
Q ss_pred HhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeecChH
Q 010752 393 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIP 468 (502)
Q Consensus 393 ~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~ 468 (502)
.+....|+|+||+.+.||++.+++|+.++.+ ++++|+++|+|+ .++.++++.++++ +++.+.+..
T Consensus 316 ------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~--~~~~l~~~i~~~~l~~~V~f~G~~--- 384 (500)
T TIGR02918 316 ------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGG--EKQKLQKIINENQAQDYIHLKGHR--- 384 (500)
T ss_pred ------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECch--hHHHHHHHHHHcCCCCeEEEcCCC---
Confidence 1234579999999999999999999999875 699999999997 4577888877764 567777742
Q ss_pred HHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 469 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 469 ~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
.+..+++.||++++||.+|+||++++|||+||+|
T Consensus 385 ~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~P 418 (500)
T TIGR02918 385 NLSEVYKDYELYLSASTSEGFGLTLMEAVGSGLG 418 (500)
T ss_pred CHHHHHHhCCEEEEcCccccccHHHHHHHHhCCC
Confidence 3567999999999999999999999999999998
No 71
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.81 E-value=8e-18 Score=172.60 Aligned_cols=272 Identities=16% Similarity=0.085 Sum_probs=169.3
Q ss_pred eEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceEE
Q 010752 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (502)
Q Consensus 86 kIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 165 (502)
+|++.+. .+||-..++..|+++|.++||+|++++.......+ .....|++++
T Consensus 1 ~~~~~~~------~~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~~----------------------~~~~~~~~~~ 52 (350)
T cd03785 1 RILIAGG------GTGGHIFPALALAEELRERGAEVLFLGTKRGLEAR----------------------LVPKAGIPLH 52 (350)
T ss_pred CEEEEec------CchhhhhHHHHHHHHHHhCCCEEEEEECCCcchhh----------------------cccccCCceE
Confidence 4666665 46888888899999999999999999875321111 0112367777
Q ss_pred EEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHHHH
Q 010752 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (502)
Q Consensus 166 ~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~~~ 245 (502)
.++.+.+..+ . .......+..+.+.+.++.+.+. +++|| |||+|.+..++....
T Consensus 53 ~~~~~~~~~~-------~---------~~~~~~~~~~~~~~~~~~~~~i~---------~~~pD-vI~~~~~~~~~~~~~ 106 (350)
T cd03785 53 TIPVGGLRRK-------G---------SLKKLKAPFKLLKGVLQARKILK---------KFKPD-VVVGFGGYVSGPVGL 106 (350)
T ss_pred EEEecCcCCC-------C---------hHHHHHHHHHHHHHHHHHHHHHH---------hcCCC-EEEECCCCcchHHHH
Confidence 6654322111 0 00111111111222222222222 13799 888887665554444
Q ss_pred HHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccccCCH
Q 010752 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (502)
Q Consensus 246 lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 325 (502)
+... .++|++++.|+.. + . .+.+.....+|.|+++|+
T Consensus 107 ~a~~-------~~~p~v~~~~~~~-----~-----------------------------~--~~~~~~~~~~~~vi~~s~ 143 (350)
T cd03785 107 AAKL-------LGIPLVIHEQNAV-----P-----------------------------G--LANRLLARFADRVALSFP 143 (350)
T ss_pred HHHH-------hCCCEEEEcCCCC-----c-----------------------------c--HHHHHHHHhhCEEEEcch
Confidence 4433 5788887655321 0 0 011223456999999999
Q ss_pred HHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCcEE
Q 010752 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (502)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p~i 405 (502)
...+.+ . ..++.+++||+|.+.+.+.. . +++++++ ++.++|
T Consensus 144 ~~~~~~--------~------~~~~~~i~n~v~~~~~~~~~----------------------~-~~~~~~~--~~~~~i 184 (350)
T cd03785 144 ETAKYF--------P------KDKAVVTGNPVREEILALDR----------------------E-RARLGLR--PGKPTL 184 (350)
T ss_pred hhhhcC--------C------CCcEEEECCCCchHHhhhhh----------------------h-HHhcCCC--CCCeEE
Confidence 877551 1 12789999999976654321 1 4555554 466788
Q ss_pred EEEcCcccccCHHH-HHHHHhhcccCCeEEE-EEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCEEEEc
Q 010752 406 GFIGRLEEQKGSDI-LAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIP 483 (502)
Q Consensus 406 ~~iGrl~~~KG~d~-ll~Al~~L~~~~v~lv-ivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi~l~P 483 (502)
+++|+....|+.+. +++|+..+.+++++++ ++|.+. .+.++++.+++.+++.+.+.. +.+.++|+.||+++.+
T Consensus 185 ~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~---~~~l~~~~~~~~~~v~~~g~~--~~~~~~l~~ad~~v~~ 259 (350)
T cd03785 185 LVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKGD---LEEVKKAYEELGVNYEVFPFI--DDMAAAYAAADLVISR 259 (350)
T ss_pred EEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCcc---HHHHHHHHhccCCCeEEeehh--hhHHHHHHhcCEEEEC
Confidence 88888777777654 5688888876677754 677773 244555555545667777654 5677899999999987
Q ss_pred CCCCCCcHHHHHHHHcCCC
Q 010752 484 SRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 484 S~~E~fglv~lEAma~G~P 502 (502)
|- +++++|||++|+|
T Consensus 260 sg----~~t~~Eam~~G~P 274 (350)
T cd03785 260 AG----ASTVAELAALGLP 274 (350)
T ss_pred CC----HhHHHHHHHhCCC
Confidence 63 6899999999998
No 72
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.81 E-value=1.9e-18 Score=181.87 Aligned_cols=201 Identities=17% Similarity=0.125 Sum_probs=146.5
Q ss_pred CCCEEEEEcCCc-cchHHHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccc
Q 010752 227 GEDVVFVANDWH-TSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 305 (502)
Q Consensus 227 ~pDvVih~h~~~-t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~ 305 (502)
+.| ++|++..+ ++.....++..+ ...+++.+.|+...... .. ...
T Consensus 127 ~~~-v~~sy~~~~~~~~~~~l~~~~------~~~~~i~~~Hg~d~~~~-------------~~--------------~~~ 172 (407)
T cd04946 127 QGT-VFYSYWLHETAYALALLKKEY------LRKRVISRAHGYDLYED-------------RY--------------PSG 172 (407)
T ss_pred Cce-EEEEecCchHHHHHHHHHHhc------CCceEEEEeccchhhhh-------------hc--------------ccc
Confidence 456 77877433 244444455543 34469999996542100 00 001
Q ss_pred hHHHHHHHHHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHH
Q 010752 306 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPL 385 (502)
Q Consensus 306 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~ 385 (502)
...+.+..+..+|.++++|+..++.+.+ .++...+ ++.+++||+|...+.+..
T Consensus 173 ~~~~~~~~~~~~d~ii~~S~~~~~~l~~--~~~~~~~------ki~vi~~gv~~~~~~~~~------------------- 225 (407)
T cd04946 173 YIPLRRYLLSSLDAVFPCSEQGRNYLQK--RYPAYKE------KIKVSYLGVSDPGIISKP------------------- 225 (407)
T ss_pred chHHHHHHHhcCCEEEECCHHHHHHHHH--HCCCccc------cEEEEECCcccccccCCC-------------------
Confidence 2233455578899999999999999884 3454443 789999999987654321
Q ss_pred HHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhcccC----CeEEEEEeCCChhhHHHHHHHHHHCC--Cce
Q 010752 386 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE----NVQIIVLGTGKKPMEKQLEQLEILYP--EKA 459 (502)
Q Consensus 386 ~k~~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~~----~v~lvivG~g~~~~~~~l~~l~~~~~--~~v 459 (502)
...+.+.|+++||+.+.||++.+++|+.++.+. +++++++|+|+ ..+.++++.++.+ +++
T Consensus 226 ------------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~--~~~~l~~~~~~~~~~~~V 291 (407)
T cd04946 226 ------------SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGP--LEDTLKELAESKPENISV 291 (407)
T ss_pred ------------CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCch--HHHHHHHHHHhcCCCceE
Confidence 113567899999999999999999999999763 57788899887 5566777776543 568
Q ss_pred EEEeecChHHHHHHHHh--cCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 460 RGVAKFNIPLAHMIIAG--ADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 460 ~~~~~~~~~~~~~ila~--ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
.+.+..+.+++..+++. +|+++.||.+|++|++++|||+||+|
T Consensus 292 ~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~P 336 (407)
T cd04946 292 NFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIP 336 (407)
T ss_pred EEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCC
Confidence 88888888888888875 78999999999999999999999998
No 73
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.80 E-value=1.2e-17 Score=171.23 Aligned_cols=271 Identities=14% Similarity=0.080 Sum_probs=160.6
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v 164 (502)
|||++++.+ .||-......|+++|.++||+|++++.......+ + ....|+++
T Consensus 1 ~~i~~~~g~------~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~~--------------------~--~~~~g~~~ 52 (348)
T TIGR01133 1 KKVVLAAGG------TGGHIFPALAVAEELIKRGVEVLWLGTKRGLEKR--------------------L--VPKAGIEF 52 (348)
T ss_pred CeEEEEeCc------cHHHHhHHHHHHHHHHhCCCEEEEEeCCCcchhc--------------------c--cccCCCce
Confidence 789988863 3444445568999999999999999863221111 0 01246777
Q ss_pred EEEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHHH
Q 010752 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (502)
Q Consensus 165 ~~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~~ 244 (502)
+.++...+... . .......+..+...+.++.+.+.. ++|| |||+|.+.....+.
T Consensus 53 ~~i~~~~~~~~-------~---------~~~~l~~~~~~~~~~~~l~~~i~~---------~~pD-vVi~~~~~~~~~~~ 106 (348)
T TIGR01133 53 YFIPVGGLRRK-------G---------SFRLIKTPLKLLKAVFQARRILKK---------FKPD-AVIGFGGYVSGPAG 106 (348)
T ss_pred EEEeccCcCCC-------C---------hHHHHHHHHHHHHHHHHHHHHHHh---------cCCC-EEEEcCCcccHHHH
Confidence 76643321110 0 011111111112222233222221 3799 89999766655544
Q ss_pred HHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccccCC
Q 010752 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (502)
Q Consensus 245 ~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 324 (502)
.+... .++|++++.|+... +....| ..+.+|.++++|
T Consensus 107 ~~~~~-------~~~p~v~~~~~~~~---------------------------------~~~~~~---~~~~~d~ii~~~ 143 (348)
T TIGR01133 107 LAAKL-------LGIPLFHHEQNAVP---------------------------------GLTNKL---LSRFAKKVLISF 143 (348)
T ss_pred HHHHH-------cCCCEEEECCCCCc---------------------------------cHHHHH---HHHHhCeeEECc
Confidence 44433 46788744331110 011123 356799999999
Q ss_pred HHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCcE
Q 010752 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (502)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p~ 404 (502)
+..++.+. ..+|+||+|...+.+... +++++++ ++.++
T Consensus 144 ~~~~~~~~-----------------~~~i~n~v~~~~~~~~~~-----------------------~~~~~~~--~~~~~ 181 (348)
T TIGR01133 144 PGAKDHFE-----------------AVLVGNPVRQEIRSLPVP-----------------------RERFGLR--EGKPT 181 (348)
T ss_pred hhHhhcCC-----------------ceEEcCCcCHHHhcccch-----------------------hhhcCCC--CCCeE
Confidence 98765542 378999998765543210 1244554 46778
Q ss_pred EEEEcCcccccCHHH-HHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCEEEEc
Q 010752 405 IGFIGRLEEQKGSDI-LAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIP 483 (502)
Q Consensus 405 i~~iGrl~~~KG~d~-ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi~l~P 483 (502)
|+++|+....|+... +++|++++.+.++++++++.+.+ . +.+++..++++ +.....|....+..+|+.||+++.+
T Consensus 182 i~~~gg~~~~~~~~~~l~~a~~~l~~~~~~~~~~~g~~~-~-~~l~~~~~~~~--l~~~v~~~~~~~~~~l~~ad~~v~~ 257 (348)
T TIGR01133 182 ILVLGGSQGAKILNELVPKALAKLAEKGIQIVHQTGKND-L-EKVKNVYQELG--IEAIVTFIDENMAAAYAAADLVISR 257 (348)
T ss_pred EEEECCchhHHHHHHHHHHHHHHHhhcCcEEEEECCcch-H-HHHHHHHhhCC--ceEEecCcccCHHHHHHhCCEEEEC
Confidence 999998888888765 56898888666667654433321 2 45666555554 2223333333677899999999987
Q ss_pred CCCCCCcHHHHHHHHcCCC
Q 010752 484 SRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 484 S~~E~fglv~lEAma~G~P 502 (502)
| + +++++|||++|+|
T Consensus 258 ~---g-~~~l~Ea~~~g~P 272 (348)
T TIGR01133 258 A---G-ASTVAELAAAGVP 272 (348)
T ss_pred C---C-hhHHHHHHHcCCC
Confidence 5 2 7899999999998
No 74
>PHA01630 putative group 1 glycosyl transferase
Probab=99.79 E-value=9.5e-19 Score=178.98 Aligned_cols=148 Identities=12% Similarity=0.107 Sum_probs=111.4
Q ss_pred HHHHHH-HHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHH
Q 010752 308 NWMKAG-ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 386 (502)
Q Consensus 308 ~~~k~~-~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~ 386 (502)
.|+... ...+|.++++|+..++.+.+ .|+.. ..++.+||||+|.+.|.|....
T Consensus 85 ~~~~~~~~~~ad~ii~~S~~~~~~l~~---~g~~~-----~~~i~vIpNGVd~~~f~~~~~~------------------ 138 (331)
T PHA01630 85 TALYFFRNQPVDEIVVPSQWSKNAFYT---SGLKI-----PQPIYVIPHNLNPRMFEYKPKE------------------ 138 (331)
T ss_pred HHHHHHhhccCCEEEECCHHHHHHHHH---cCCCC-----CCCEEEECCCCCHHHcCCCccc------------------
Confidence 344444 56799999999999999874 33321 1278999999999888664310
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEee
Q 010752 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 464 (502)
Q Consensus 387 k~~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~ 464 (502)
..+..++++.|++.++||+|.+++|++++.+ ++++++++|++... ..+. .+. ...+.
T Consensus 139 ------------~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~~--~~l~----~~~---~~~~~ 197 (331)
T PHA01630 139 ------------KPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNMLD--PRLF----GLN---GVKTP 197 (331)
T ss_pred ------------cCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCcccc--hhhc----ccc---ceecc
Confidence 1134467788899999999999999999876 58999999976421 1111 111 12234
Q ss_pred cChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 465 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 465 ~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
.+.+++..+|+.||++++||++|+||++++||||||+|
T Consensus 198 v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~P 235 (331)
T PHA01630 198 LPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLD 235 (331)
T ss_pred CCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCC
Confidence 56688889999999999999999999999999999998
No 75
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.77 E-value=9.8e-18 Score=173.39 Aligned_cols=147 Identities=21% Similarity=0.166 Sum_probs=116.1
Q ss_pred HHHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHH
Q 010752 313 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 392 (502)
Q Consensus 313 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~ 392 (502)
.+..+|.++++|+..++.+.+ .++.. .++.+||||++...+.+..
T Consensus 154 ~~~~~d~ii~~s~~~~~~l~~--~~~~~-------~~v~~ip~g~~~~~~~~~~-------------------------- 198 (372)
T cd04949 154 NLDKVDGVIVATEQQKQDLQK--QFGNY-------NPIYTIPVGSIDPLKLPAQ-------------------------- 198 (372)
T ss_pred ChhhCCEEEEccHHHHHHHHH--HhCCC-------CceEEEcccccChhhcccc--------------------------
Confidence 357899999999999999874 22211 1488999999987765531
Q ss_pred HhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeecChH
Q 010752 393 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIP 468 (502)
Q Consensus 393 ~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~ 468 (502)
......+.|+++||+.+.||++.+++|+.++.+ ++++|+++|.|. .+..++++.++++ +++.+.+ + .+
T Consensus 199 ----~~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g-~-~~ 270 (372)
T cd04949 199 ----FKQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGD--EEEKLKELIEELGLEDYVFLKG-Y-TR 270 (372)
T ss_pred ----hhhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCc--hHHHHHHHHHHcCCcceEEEcC-C-CC
Confidence 011245689999999999999999999999876 689999999987 3455566655543 5566666 3 45
Q ss_pred HHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 469 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 469 ~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
++..+|+.||++++||.+|+||++++|||+||+|
T Consensus 271 ~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~P 304 (372)
T cd04949 271 DLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLP 304 (372)
T ss_pred CHHHHHhhhhEEEecccccccChHHHHHHhCCCC
Confidence 5778999999999999999999999999999998
No 76
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.76 E-value=7.9e-17 Score=167.78 Aligned_cols=150 Identities=14% Similarity=0.169 Sum_probs=108.7
Q ss_pred HHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHH
Q 010752 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (502)
Q Consensus 314 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~ 393 (502)
.+.+|.++++|+..++.+.+ +|++.+ ++.++.|.++. .|.+..+ +..++++
T Consensus 145 ~~~ad~i~~~s~~~~~~l~~---~gi~~~------ki~v~G~p~~~-~f~~~~~-------------------~~~~~~~ 195 (380)
T PRK13609 145 HREVDRYFVATDHVKKVLVD---IGVPPE------QVVETGIPIRS-SFELKIN-------------------PDIIYNK 195 (380)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCChh------HEEEECcccCh-HHcCcCC-------------------HHHHHHH
Confidence 45799999999999999985 566655 66766554432 2322110 2346778
Q ss_pred hCCCCCCCCc-EEEEEcCcccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHH
Q 010752 394 VGLPVDRNIP-VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 472 (502)
Q Consensus 394 ~gl~~~~~~p-~i~~iGrl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ 472 (502)
+|++. +.+ ++++.|++...|+++.+++++.+. ++++++++|.+.+..++.++++.+.+++++.+.+.. +.+.+
T Consensus 196 ~~l~~--~~~~il~~~G~~~~~k~~~~li~~l~~~--~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~--~~~~~ 269 (380)
T PRK13609 196 YQLCP--NKKILLIMAGAHGVLGNVKELCQSLMSV--PDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYV--ENIDE 269 (380)
T ss_pred cCCCC--CCcEEEEEcCCCCCCcCHHHHHHHHhhC--CCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEech--hhHHH
Confidence 88763 444 455668888899999999998754 688998876544445677777776666678887654 34678
Q ss_pred HHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 473 IIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 473 ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
+|+.||+++. ++.|++++|||+||+|
T Consensus 270 l~~~aD~~v~----~~gg~t~~EA~a~g~P 295 (380)
T PRK13609 270 LFRVTSCMIT----KPGGITLSEAAALGVP 295 (380)
T ss_pred HHHhccEEEe----CCCchHHHHHHHhCCC
Confidence 9999999873 5679999999999998
No 77
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.75 E-value=1.3e-16 Score=151.12 Aligned_cols=94 Identities=30% Similarity=0.470 Sum_probs=76.7
Q ss_pred EEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHH--HCCCceEEEeec-ChHHHHHHHHhcCEEE
Q 010752 407 FIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEI--LYPEKARGVAKF-NIPLAHMIIAGADFIL 481 (502)
Q Consensus 407 ~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~--~~~~~v~~~~~~-~~~~~~~ila~ADi~l 481 (502)
|+|++.+.||++.+++++..+.+ ++++++++|.+.+. ...+++.. ....++.+.+.+ +.+....+++.||+++
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di~l 186 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPER--EYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFV 186 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCCh--HHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCEEE
Confidence 99999999999999999999976 49999999998743 22332122 234678888776 4566667777799999
Q ss_pred EcCCCCCCcHHHHHHHHcCCC
Q 010752 482 IPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 482 ~PS~~E~fglv~lEAma~G~P 502 (502)
.||..|++|++++|||+||+|
T Consensus 187 ~~~~~e~~~~~~~Eam~~g~p 207 (229)
T cd01635 187 LPSLREGFGLVVLEAMACGLP 207 (229)
T ss_pred ecccccCcChHHHHHHhCCCC
Confidence 999999999999999999998
No 78
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.74 E-value=2.2e-17 Score=185.93 Aligned_cols=225 Identities=18% Similarity=0.214 Sum_probs=148.3
Q ss_pred CCEEEEEcCCccchHHHHHHHhccCCCCcCCCeEEEEEecCcccccccccc-ccccCCCcccccccccccCCCCCcccch
Q 010752 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (502)
Q Consensus 228 pDvVih~h~~~t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~-~~~l~lp~~~~~~~~~~~~~~~~~~~~~ 306 (502)
+|.+|..||+|..++|.+++++. .++++.|..|.. ||.+. |..+. .
T Consensus 147 ~~d~vWvhDYhL~llp~~lR~~~------~~~~igfFlHiP-----FPs~e~fr~lp----------------------~ 193 (797)
T PLN03063 147 EGDVVWCHDYHLMFLPQYLKEYN------NKMKVGWFLHTP-----FPSSEIYKTLP----------------------S 193 (797)
T ss_pred CCCEEEEecchhhhHHHHHHHhC------CCCcEEEEecCC-----CCCHHHHhhCC----------------------C
Confidence 43399999999999999999876 789999999943 22211 11111 1
Q ss_pred HHHHHHHHHhcCccccCCHHHHHHHHcCC--CCCCcc--hhh---hccccEEEeeCCCcCCCCCCCcccccccccCcchh
Q 010752 307 INWMKAGILESDMVLTVSPHYAQELVSGE--DKGVEL--DNI---IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV 379 (502)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~--~~g~~~--~~~---~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~ 379 (502)
-..+-.++..||.|-+.+..+++.+.+.- ..|.+. ..+ -+..++.++|||||++.|.+....
T Consensus 194 r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~----------- 262 (797)
T PLN03063 194 RSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCEL----------- 262 (797)
T ss_pred HHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcC-----------
Confidence 12334567889999999999998777511 111111 011 122478899999999888653210
Q ss_pred ccchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc--CC----eEEEEEeC-----CCh--hhHH
Q 010752 380 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN----VQIIVLGT-----GKK--PMEK 446 (502)
Q Consensus 380 ~~~k~~~k~~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~--~~----v~lvivG~-----g~~--~~~~ 446 (502)
.......+++++.++ +.++|+++||+++.||++.+++|++++.+ ++ +.|++++. ++. .+++
T Consensus 263 -~~~~~~~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~ 336 (797)
T PLN03063 263 -PEVKQHMKELKRFFA-----GRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKS 336 (797)
T ss_pred -hhHHHHHHHHHHhcC-----CCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHH
Confidence 000111234455443 56799999999999999999999999865 33 44554442 111 2334
Q ss_pred HHHHHHHHCCCc--------eEEEe-ecChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 447 QLEQLEILYPEK--------ARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 447 ~l~~l~~~~~~~--------v~~~~-~~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
+++++....+++ ++... ..+.+++.++|+.||++|+||.+|++|++.+|||+||+|
T Consensus 337 ~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p 401 (797)
T PLN03063 337 QVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKA 401 (797)
T ss_pred HHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecC
Confidence 444443222211 11122 346678889999999999999999999999999999976
No 79
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.74 E-value=4.2e-17 Score=172.39 Aligned_cols=294 Identities=21% Similarity=0.257 Sum_probs=152.4
Q ss_pred EeeeccCccccccHHHHHhhhHHHHHHC-CCeEEEEEecCCCCcc------ccCCceEEEE-E-eCCeeeEEEEEEEeec
Q 010752 90 VGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAPRYDQYKD------AWDTDVVIEL-K-VGDKIEKVRFFHCHKR 160 (502)
Q Consensus 90 V~~~~~P~~~~GG~~~~v~~La~aLa~~-Gh~V~vitp~~~~~~~------~~~~~~~~~~-~-~~~~~~~~~~~~~~~~ 160 (502)
+++|+.. +.||+-.|+..=|+.+.+. |.+..++.|...+... .++....... . ....--.+++.++...
T Consensus 2 ~sWEVcN--KVGGIYTVi~tKA~~~~~e~gd~y~lIGP~~~~~~~~e~e~~e~~~~~l~~~~~~~~~~Gl~v~~GRWlI~ 79 (633)
T PF05693_consen 2 VSWEVCN--KVGGIYTVISTKAPTMVEEFGDNYILIGPYNEQNARTEVEEIEPDNPLLKDALESMREEGLKVRYGRWLIP 79 (633)
T ss_dssp EETTTTS---SSSHHHHHHHHHHHHHHHHGGGEEEEEE--TTTHHHHEEE--SSSGGHHHHHHHHHHTT-EEEEEEESST
T ss_pred chhhhcc--ccCCeehhhhccHHHHHHHHCCeEEEECCCCCcccCCCCCcCCCCCHHHHHHHHHHHhCCCeEEEeceeEC
Confidence 5677777 8999999999988888765 9999999996543211 0011000000 0 0000123566777888
Q ss_pred CceEEE-EeCCcc-------cccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEE
Q 010752 161 GVDRVF-VDHPWF-------LAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVF 232 (502)
Q Consensus 161 gv~v~~-i~~p~~-------~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVi 232 (502)
|.+.+. +|...+ ...+|-..+ +-++...++ .....+|+.++...+..+-.. .. -++.||.
T Consensus 80 G~P~vIL~D~~s~~~~ldeik~~lW~~~g--IdS~~~~~d----ynea~~Fgyava~fi~~f~~~----~~--~~~~Via 147 (633)
T PF05693_consen 80 GRPIVILFDFGSFFWKLDEIKGELWELFG--IDSPHGDGD----YNEAVMFGYAVAWFIEEFYKF----YE--EKPKVIA 147 (633)
T ss_dssp T--EEEEEEGGGGGGGHHHHHHHHHHHH-------TT-HH----HHHHHHHHHHHHHHHHHHHHH-----S---SEEEEE
T ss_pred CcCeEEEEeCchHHHHHHHHHHHHHHHcC--CCCCCCCcc----hhHHHHHHHHHHHHHHHHHHh----hc--CCCcEEE
Confidence 888774 454322 233442222 111111122 222234544444444332110 00 0478899
Q ss_pred EEcCCccchHHHHHHHhccCCCCcCCCeEEEEEecCcccccc-ccccccccCCCcccccccccccCCCC---CcccchHH
Q 010752 233 VANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRF-AFEDFGLLNLPAQFKSSFDFIDGYNK---PVRGRKIN 308 (502)
Q Consensus 233 h~h~~~t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~-~~~~~~~l~lp~~~~~~~~~~~~~~~---~~~~~~~~ 308 (502)
|+|+|+++...++++... ..+.+|||.|.+.. ||. +.+..+ ++..+...++... .-...+..
T Consensus 148 HfHEWmaG~gll~lr~~~------~~VaTvFTTHAT~l-GR~l~~~~~~-------~Y~~L~~~~~d~eA~~~~i~~k~~ 213 (633)
T PF05693_consen 148 HFHEWMAGVGLLYLRKRK------PDVATVFTTHATLL-GRYLAANNKD-------FYNNLDKFNGDQEAGERNIYHKHS 213 (633)
T ss_dssp EEESGGGTTHHHHHHHTT-------SCEEEEEESS-HH-HHHHTTTSS--------TTTSGTTS-HHHHHHHTT-HHHHH
T ss_pred EechHhHhHHHHHHhccC------CCeeEEEEecccch-hhHhhcCCCc-------HHHHhhccCccccccCccchHHHH
Confidence 999999999999999865 68999999998764 432 111111 1111111111000 00112456
Q ss_pred HHHHHHHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchh-ccchHHHH
Q 010752 309 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV-MDAKPLLK 387 (502)
Q Consensus 309 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~-~~~k~~~k 387 (502)
++++....||.+.|||+-++.|... .++..+| .|+|||+|.+.|..... | +.. ..+|+.+.
T Consensus 214 iEraaA~~AdvFTTVSeITa~Ea~~--LL~r~pD--------vV~pNGl~v~~~~~~~e-f-------qnl~~~~k~ki~ 275 (633)
T PF05693_consen 214 IERAAAHYADVFTTVSEITAKEAEH--LLKRKPD--------VVTPNGLNVDKFPALHE-F-------QNLHAKAKEKIH 275 (633)
T ss_dssp HHHHHHHHSSEEEESSHHHHHHHHH--HHSS--S--------EE----B-GGGTSSTTH-H-------HHHHHHHHHHHH
T ss_pred HHHHHHHhcCeeeehhhhHHHHHHH--HhCCCCC--------EEcCCCccccccccchH-H-------HHHHHHHHHHHH
Confidence 6688899999999999999998774 3344444 78899999986644321 0 000 02233333
Q ss_pred HHHHHHh-CC-CCCCC-CcEEEEEcCcc-cccCHHHHHHHHhhccc
Q 010752 388 EALQAEV-GL-PVDRN-IPVIGFIGRLE-EQKGSDILAAAIPHFIK 429 (502)
Q Consensus 388 ~~l~~~~-gl-~~~~~-~p~i~~iGrl~-~~KG~d~ll~Al~~L~~ 429 (502)
+-++..+ |. ..|.+ ..+|...||+| ..||.|.+|||+.+|..
T Consensus 276 ~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~ 321 (633)
T PF05693_consen 276 EFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNH 321 (633)
T ss_dssp HHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHH
T ss_pred HHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHH
Confidence 3334332 32 23333 44566679999 69999999999999843
No 80
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.73 E-value=1.9e-16 Score=165.42 Aligned_cols=150 Identities=16% Similarity=0.154 Sum_probs=112.9
Q ss_pred HHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHH
Q 010752 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (502)
Q Consensus 314 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~ 393 (502)
.+.+|.++++|+..++++.+ +|++.+ ++.++++++|.+.+.+.. .+++++++
T Consensus 148 ~~~~d~~~~~s~~~~~~l~~---~g~~~~------ki~v~g~~v~~~f~~~~~-------------------~~~~~r~~ 199 (382)
T PLN02605 148 HKGVTRCFCPSEEVAKRALK---RGLEPS------QIRVYGLPIRPSFARAVR-------------------PKDELRRE 199 (382)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCCHH------HEEEECcccCHhhccCCC-------------------CHHHHHHH
Confidence 35799999999999999885 577665 788888888765443321 14567889
Q ss_pred hCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhcc------cCCeE-EEEEeCCChhhHHHHHHHHHHCCCceEEEeecC
Q 010752 394 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI------KENVQ-IIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 466 (502)
Q Consensus 394 ~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~------~~~v~-lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~ 466 (502)
+|++ ++.++|+++|+....|+...+++++.++. .++.+ ++++|.+. ...+.++++. ...++.+.+..+
T Consensus 200 ~gl~--~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~-~~~~~L~~~~--~~~~v~~~G~~~ 274 (382)
T PLN02605 200 LGMD--EDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK-KLQSKLESRD--WKIPVKVRGFVT 274 (382)
T ss_pred cCCC--CCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH-HHHHHHHhhc--ccCCeEEEeccc
Confidence 9986 46789999999999999999999998754 35666 55666653 3445555442 234577666653
Q ss_pred hHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 467 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 467 ~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
++.++|+.||++|.++ .|++++|||+||+|
T Consensus 275 --~~~~l~~aaDv~V~~~----g~~ti~EAma~g~P 304 (382)
T PLN02605 275 --NMEEWMGACDCIITKA----GPGTIAEALIRGLP 304 (382)
T ss_pred --cHHHHHHhCCEEEECC----CcchHHHHHHcCCC
Confidence 5889999999999865 48999999999998
No 81
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.70 E-value=1e-16 Score=180.28 Aligned_cols=225 Identities=18% Similarity=0.223 Sum_probs=151.9
Q ss_pred CCCEEEEEcCCccchHHHHHHHhccCCCCcCCCeEEEEEecCcccccccccc-ccccCCCcccccccccccCCCCCcccc
Q 010752 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGR 305 (502)
Q Consensus 227 ~pDvVih~h~~~t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~-~~~l~lp~~~~~~~~~~~~~~~~~~~~ 305 (502)
++|.+|..||+|..++|.+++++. .+.++.|-.|-. ||..+ +..+ |
T Consensus 132 ~~~d~vwvhDYhl~l~p~~lr~~~------~~~~igfFlH~p-----fP~~~~f~~l--p-------------------- 178 (726)
T PRK14501 132 RPGDVVWVHDYQLMLLPAMLRERL------PDARIGFFLHIP-----FPSFEVFRLL--P-------------------- 178 (726)
T ss_pred CCCCEEEEeCchhhhHHHHHHhhC------CCCcEEEEeeCC-----CCChHHHhhC--C--------------------
Confidence 343399999999999999999875 688999999943 23221 1111 1
Q ss_pred hHHHHHHHHHhcCccccCCHHHHHHHHcCCC--CCCcc--hh---hhccccEEEeeCCCcCCCCCCCcccccccccCcch
Q 010752 306 KINWMKAGILESDMVLTVSPHYAQELVSGED--KGVEL--DN---IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 378 (502)
Q Consensus 306 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~--~~---~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~ 378 (502)
.-..+-.++..+|.|-+.+..+++.+.+.-. .+.+. .. .-+..++.++|||||++.|.+....
T Consensus 179 ~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~---------- 248 (726)
T PRK14501 179 WREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQD---------- 248 (726)
T ss_pred ChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcC----------
Confidence 1123344677899999999998887654211 11110 00 0112368899999999998764310
Q ss_pred hccchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc--C----CeEEEEEeCC--C--h---hhH
Q 010752 379 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTG--K--K---PME 445 (502)
Q Consensus 379 ~~~~k~~~k~~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~--~----~v~lvivG~g--~--~---~~~ 445 (502)
....+..+++++.. ++.++|+++||+++.||++.+++|++++.+ + +++|+++|.+ . + +++
T Consensus 249 --~~~~~~~~~lr~~~-----~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~ 321 (726)
T PRK14501 249 --PEVQEEIRRLRQDL-----RGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMK 321 (726)
T ss_pred --chHHHHHHHHHHHc-----CCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHH
Confidence 01112233455553 266799999999999999999999999865 3 4789888733 1 2 234
Q ss_pred HHHHHHHHHCCC--------ceE-EEeecChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCC
Q 010752 446 KQLEQLEILYPE--------KAR-GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT 501 (502)
Q Consensus 446 ~~l~~l~~~~~~--------~v~-~~~~~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~ 501 (502)
++++++..+.++ .+. +.+.++.+++..+|+.||++++||.+|++|++++|||+||+
T Consensus 322 ~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~ 386 (726)
T PRK14501 322 REIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRT 386 (726)
T ss_pred HHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcC
Confidence 455555433221 133 33456778888999999999999999999999999999965
No 82
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.68 E-value=1.1e-15 Score=162.39 Aligned_cols=225 Identities=16% Similarity=0.178 Sum_probs=160.0
Q ss_pred CCCEEEEEcCCccchHHHHHHHhccCCCCcCCCeEEEEEecCcccccccccc-ccccCCCcccccccccccCCCCCcccc
Q 010752 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGR 305 (502)
Q Consensus 227 ~pDvVih~h~~~t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~-~~~l~lp~~~~~~~~~~~~~~~~~~~~ 305 (502)
++|.+|..||+|..++|.+++++. .+.++.|-.|.. ||..+ |..+ |
T Consensus 131 ~~~d~vWVhDYhL~llp~~LR~~~------~~~~IgfFlHiP-----FPs~eifr~L--P-------------------- 177 (487)
T TIGR02398 131 AEGATVWVHDYNLWLVPGYIRQLR------PDLKIAFFHHTP-----FPSADVFNIL--P-------------------- 177 (487)
T ss_pred CCCCEEEEecchhhHHHHHHHHhC------CCCeEEEEeeCC-----CCChHHHhhC--C--------------------
Confidence 344499999999999999999875 688999999943 22211 1111 1
Q ss_pred hHHHHHHHHHhcCccccCCHHHHHHHHcCCC--CCCcchh--------------------------hhccccEEEeeCCC
Q 010752 306 KINWMKAGILESDMVLTVSPHYAQELVSGED--KGVELDN--------------------------IIRKTGIKGIVNGM 357 (502)
Q Consensus 306 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~~--------------------------~~~~~~i~vI~NGv 357 (502)
.-..+-.++..+|.|-+.++.+++.+.+... .|.+... --+...+.++|.||
T Consensus 178 ~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGI 257 (487)
T TIGR02398 178 WREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGT 257 (487)
T ss_pred chHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEe
Confidence 1133345678999999999999987775211 1211100 01223578999999
Q ss_pred cCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc--C----C
Q 010752 358 DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----N 431 (502)
Q Consensus 358 d~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~--~----~ 431 (502)
|++.|.+.... ..-.+..+++++++| +.++|++++|+++.||+...++|++++.+ | +
T Consensus 258 D~~~f~~~~~~------------~~~~~~~~~lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gk 320 (487)
T TIGR02398 258 DPERIRSALAA------------ASIREMMERIRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGK 320 (487)
T ss_pred cHHHHHHHhcC------------chHHHHHHHHHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCc
Confidence 99988654211 112334566888877 56799999999999999999999999866 3 5
Q ss_pred eEEEEEeCCC----h---hhHHHHHHHHHHCCCc---------eEEEeecChHHHHHHHHhcCEEEEcCCCCCCcHHHHH
Q 010752 432 VQIIVLGTGK----K---PMEKQLEQLEILYPEK---------ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLH 495 (502)
Q Consensus 432 v~lvivG~g~----~---~~~~~l~~l~~~~~~~---------v~~~~~~~~~~~~~ila~ADi~l~PS~~E~fglv~lE 495 (502)
+.|+++|.+. + .++++++++..+.+++ +.+...++.+++..+|+.||++++||..||++|+..|
T Consensus 321 v~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~E 400 (487)
T TIGR02398 321 VTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKE 400 (487)
T ss_pred eEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhh
Confidence 8999998753 2 3556666666654211 2334455778888999999999999999999999999
Q ss_pred HHHcCC
Q 010752 496 AMRYGT 501 (502)
Q Consensus 496 Ama~G~ 501 (502)
+|+|+.
T Consensus 401 yva~~~ 406 (487)
T TIGR02398 401 YVAAQG 406 (487)
T ss_pred HHhhhc
Confidence 999975
No 83
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.66 E-value=6e-15 Score=156.09 Aligned_cols=159 Identities=18% Similarity=0.172 Sum_probs=110.7
Q ss_pred HHHHHHHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHH
Q 010752 309 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 388 (502)
Q Consensus 309 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~ 388 (502)
+++..+..+|.|+++|+..++.+.+ .|++ .. +.+++|+ +.+.+.+.. ......
T Consensus 171 ~~r~~~~~~d~ii~~S~~~~~~l~~---~g~~------~~-i~vi~n~-~~d~~~~~~----------------~~~~~~ 223 (425)
T PRK05749 171 FYRLLFKNIDLVLAQSEEDAERFLA---LGAK------NE-VTVTGNL-KFDIEVPPE----------------LAARAA 223 (425)
T ss_pred HHHHHHHhCCEEEECCHHHHHHHHH---cCCC------CC-cEecccc-cccCCCChh----------------hHHHHH
Confidence 4466678899999999999999985 4543 12 6777774 333322211 011234
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCc-eE-----
Q 010752 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEK-AR----- 460 (502)
Q Consensus 389 ~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~~~~-v~----- 460 (502)
+++++++ + +.+++++.|+. .|+.+.+++|++++.+ ++++|+|+|.|++. .+.++++.++.+-. +.
T Consensus 224 ~~r~~~~-~---~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~r-~~~l~~~~~~~gl~~~~~~~~~ 296 (425)
T PRK05749 224 TLRRQLA-P---NRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPER-FKEVEELLKKAGLSYVRRSQGE 296 (425)
T ss_pred HHHHHhc-C---CCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChhh-HHHHHHHHHhCCCcEEEccCCC
Confidence 5666765 2 56788888874 5889999999999865 68999999998732 24566666665421 11
Q ss_pred --------EEeecChHHHHHHHHhcCEEEE-cCCCCCCcHHHHHHHHcCCC
Q 010752 461 --------GVAKFNIPLAHMIIAGADFILI-PSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 461 --------~~~~~~~~~~~~ila~ADi~l~-PS~~E~fglv~lEAma~G~P 502 (502)
.++. ...++..+|+.||++++ +|..|++|.+++|||+||+|
T Consensus 297 ~~~~~~~v~l~~-~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~P 346 (425)
T PRK05749 297 PPSADTDVLLGD-TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGVP 346 (425)
T ss_pred CCCCCCcEEEEe-cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCCC
Confidence 1111 23467799999999766 56679999999999999998
No 84
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.63 E-value=7.9e-14 Score=145.14 Aligned_cols=155 Identities=17% Similarity=0.193 Sum_probs=115.4
Q ss_pred HHHHHHHHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHH
Q 010752 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (502)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k 387 (502)
.+++..++.||.|+++|+.+++.+.+ ++ . ++.+|+||+|.+.|.+..... .
T Consensus 145 ~~e~~~~~~ad~vi~~S~~l~~~~~~---~~---~------~i~~i~ngvd~~~f~~~~~~~------------~----- 195 (373)
T cd04950 145 EAERRLLKRADLVFTTSPSLYEAKRR---LN---P------NVVLVPNGVDYEHFAAARDPP------------P----- 195 (373)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHhh---CC---C------CEEEcccccCHHHhhcccccC------------C-----
Confidence 55677789999999999999988774 22 2 789999999999887643210 0
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecCh
Q 010752 388 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 467 (502)
Q Consensus 388 ~~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~ 467 (502)
..+.. ...+.++|+|+|++.+.++.+.+.+++... ++++|+++|.++... ...++. ...++.+.+..+.
T Consensus 196 -~~~~~----~~~~~~~i~y~G~l~~~~d~~ll~~la~~~--p~~~~vliG~~~~~~--~~~~~~--~~~nV~~~G~~~~ 264 (373)
T cd04950 196 -PPADL----AALPRPVIGYYGAIAEWLDLELLEALAKAR--PDWSFVLIGPVDVSI--DPSALL--RLPNVHYLGPKPY 264 (373)
T ss_pred -ChhHH----hcCCCCEEEEEeccccccCHHHHHHHHHHC--CCCEEEEECCCcCcc--ChhHhc--cCCCEEEeCCCCH
Confidence 00000 113577999999999988887776666543 789999999983211 112221 1357999999998
Q ss_pred HHHHHHHHhcCEEEEcCCC-----CCCcHHHHHHHHcCCC
Q 010752 468 PLAHMIIAGADFILIPSRF-----EPCGLIQLHAMRYGTV 502 (502)
Q Consensus 468 ~~~~~ila~ADi~l~PS~~-----E~fglv~lEAma~G~P 502 (502)
+++..+++.+|++++|+.. +.+|+.++||||||+|
T Consensus 265 ~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~P 304 (373)
T cd04950 265 KELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKP 304 (373)
T ss_pred HHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCC
Confidence 9999999999999999864 4689999999999998
No 85
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.61 E-value=7.6e-14 Score=146.27 Aligned_cols=149 Identities=13% Similarity=0.121 Sum_probs=103.2
Q ss_pred HhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHh
Q 010752 315 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 394 (502)
Q Consensus 315 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~ 394 (502)
..+|.+++.|+..++.+.+ .|++.+ ++.++.|+++.. |.+.. .+.+++.++
T Consensus 146 ~~~d~~~v~s~~~~~~l~~---~gi~~~------ki~v~GiPv~~~-f~~~~-------------------~~~~~~~~~ 196 (391)
T PRK13608 146 PYSTRYYVATKETKQDFID---VGIDPS------TVKVTGIPIDNK-FETPI-------------------DQKQWLIDN 196 (391)
T ss_pred CCCCEEEECCHHHHHHHHH---cCCCHH------HEEEECeecChH-hcccc-------------------cHHHHHHHc
Confidence 4699999999999999984 566655 777776666532 32211 134567788
Q ss_pred CCCCCCCCcE-EEEEcCcccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHH
Q 010752 395 GLPVDRNIPV-IGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 473 (502)
Q Consensus 395 gl~~~~~~p~-i~~iGrl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i 473 (502)
|++. +.++ +++.|++...||++.+++++.+. .+++++++++.+.+...+.+++... ..+++.+.+.. +.+.++
T Consensus 197 ~l~~--~~~~ilv~~G~lg~~k~~~~li~~~~~~-~~~~~~vvv~G~~~~l~~~l~~~~~-~~~~v~~~G~~--~~~~~~ 270 (391)
T PRK13608 197 NLDP--DKQTILMSAGAFGVSKGFDTMITDILAK-SANAQVVMICGKSKELKRSLTAKFK-SNENVLILGYT--KHMNEW 270 (391)
T ss_pred CCCC--CCCEEEEECCCcccchhHHHHHHHHHhc-CCCceEEEEcCCCHHHHHHHHHHhc-cCCCeEEEecc--chHHHH
Confidence 8763 4444 56789999899999999996432 2578887765443333344443221 22457666643 457889
Q ss_pred HHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 474 IAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 474 la~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
|+.||+++. ++.|++++|||++|+|
T Consensus 271 ~~~aDl~I~----k~gg~tl~EA~a~G~P 295 (391)
T PRK13608 271 MASSQLMIT----KPGGITISEGLARCIP 295 (391)
T ss_pred HHhhhEEEe----CCchHHHHHHHHhCCC
Confidence 999999995 4679999999999998
No 86
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.53 E-value=9.4e-14 Score=127.82 Aligned_cols=112 Identities=29% Similarity=0.425 Sum_probs=92.1
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhcc---cCCeEEEEEeCCChhhHHHHHHHHHHCC--CceEE
Q 010752 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI---KENVQIIVLGTGKKPMEKQLEQLEILYP--EKARG 461 (502)
Q Consensus 387 k~~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~---~~~v~lvivG~g~~~~~~~l~~l~~~~~--~~v~~ 461 (502)
|+..+...+.+ .+.++|+|+||+.+.||++.+++|+.++. .++++++|+|.+. ....++.+.+.+. +++.+
T Consensus 2 ~~~~~~~~~~~--~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~i~~ 77 (172)
T PF00534_consen 2 KDKLREKLKIP--DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGE--YKKELKNLIEKLNLKENIIF 77 (172)
T ss_dssp HHHHHHHTTT---TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCC--HHHHHHHHHHHTTCGTTEEE
T ss_pred hHHHHHHcCCC--CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccc--cccccccccccccccccccc
Confidence 34555665543 57789999999999999999999999986 4799999999766 5566777666644 67889
Q ss_pred EeecChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 462 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 462 ~~~~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
.+..+.+++..+++.||++++||.+|+||++++|||+||+|
T Consensus 78 ~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~p 118 (172)
T PF00534_consen 78 LGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCP 118 (172)
T ss_dssp EESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-E
T ss_pred cccccccccccccccceeccccccccccccccccccccccc
Confidence 88888888999999999999999999999999999999997
No 87
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.50 E-value=8.2e-13 Score=136.27 Aligned_cols=153 Identities=17% Similarity=0.184 Sum_probs=108.0
Q ss_pred HHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCC-cCCCCCCCcccccccccCcchhccchHHHHHHHHH
Q 010752 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 392 (502)
Q Consensus 314 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGv-d~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~ 392 (502)
...+|.++++|+..++.+.+ .|++.+ ++.+++|++ |...+.+... .....++
T Consensus 139 ~~~ad~~~~~s~~~~~~l~~---~G~~~~------kI~vign~v~d~~~~~~~~~------------------~~~~~~~ 191 (363)
T cd03786 139 DKLSDLHFAPTEEARRNLLQ---EGEPPE------RIFVVGNTMIDALLRLLELA------------------KKELILE 191 (363)
T ss_pred HHHhhhccCCCHHHHHHHHH---cCCCcc------cEEEECchHHHHHHHHHHhh------------------ccchhhh
Confidence 45789999999999999884 576665 889999985 5432221110 0011234
Q ss_pred HhCCCCCCCCcEEEEEcCccc---ccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHC---CCceEEEeecC
Q 010752 393 EVGLPVDRNIPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY---PEKARGVAKFN 466 (502)
Q Consensus 393 ~~gl~~~~~~p~i~~iGrl~~---~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~---~~~v~~~~~~~ 466 (502)
+++++ ++..++++.||... .||++.+++|+.++.+.++++++.|.+. ..+.+++...++ .+++.+.+...
T Consensus 192 ~~~~~--~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~--~~~~l~~~~~~~~~~~~~v~~~~~~~ 267 (363)
T cd03786 192 LLGLL--PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR--TRPRIREAGLEFLGHHPNVLLISPLG 267 (363)
T ss_pred hcccC--CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC--hHHHHHHHHHhhccCCCCEEEECCcC
Confidence 56664 24446778899875 7999999999999865556666666554 445566655554 35677776555
Q ss_pred hHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 467 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 467 ~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
.+.+..+|+.||++|.||. | ++.|||++|+|
T Consensus 268 ~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~P 298 (363)
T cd03786 268 YLYFLLLLKNADLVLTDSG----G-IQEEASFLGVP 298 (363)
T ss_pred HHHHHHHHHcCcEEEEcCc----c-HHhhhhhcCCC
Confidence 6778889999999999995 4 57999999998
No 88
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.49 E-value=9e-13 Score=137.10 Aligned_cols=145 Identities=19% Similarity=0.130 Sum_probs=95.4
Q ss_pred HHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHH
Q 010752 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (502)
Q Consensus 314 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~ 393 (502)
.+.+|.++++|+..++.+.+ .|+ ++.++.|.+.. ..+.. ..+++++++
T Consensus 132 ~~~~d~i~~~~~~~~~~~~~---~g~---------~~~~~G~p~~~--~~~~~------------------~~~~~~~~~ 179 (380)
T PRK00025 132 AKATDHVLALFPFEAAFYDK---LGV---------PVTFVGHPLAD--AIPLL------------------PDRAAARAR 179 (380)
T ss_pred HHHHhhheeCCccCHHHHHh---cCC---------CeEEECcCHHH--hcccc------------------cChHHHHHH
Confidence 56799999999998887763 222 23444444322 11110 013456778
Q ss_pred hCCCCCCCCcEE-EEEc-Ccccc-cCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHC-CCceEEEeecCh
Q 010752 394 VGLPVDRNIPVI-GFIG-RLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY-PEKARGVAKFNI 467 (502)
Q Consensus 394 ~gl~~~~~~p~i-~~iG-rl~~~-KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~-~~~v~~~~~~~~ 467 (502)
+|++ ++.+++ ++.| |..+. ++.+.+++|++++.+ ++++++++|.+. ..++.++++..++ +.++.+ + .
T Consensus 180 l~~~--~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~-~~~~~~~~~~~~~~~~~v~~---~-~ 252 (380)
T PRK00025 180 LGLD--PDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNP-KRREQIEEALAEYAGLEVTL---L-D 252 (380)
T ss_pred cCCC--CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCh-hhHHHHHHHHhhcCCCCeEE---E-c
Confidence 8875 345654 4445 44444 457899999998865 578999987633 2455666665555 323322 2 2
Q ss_pred HHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 468 ~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
+++..+|+.||+++.+| |.+.+|||++|+|
T Consensus 253 ~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~P 282 (380)
T PRK00025 253 GQKREAMAAADAALAAS-----GTVTLELALLKVP 282 (380)
T ss_pred ccHHHHHHhCCEEEECc-----cHHHHHHHHhCCC
Confidence 46778999999999998 8899999999998
No 89
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.46 E-value=4.4e-13 Score=122.38 Aligned_cols=176 Identities=22% Similarity=0.288 Sum_probs=91.8
Q ss_pred EEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceEEE
Q 010752 87 ILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVF 166 (502)
Q Consensus 87 Il~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~ 166 (502)
|+++... .+ ..||++.++.+|+++|+++||+|+++++........ ......
T Consensus 1 ili~~~~-~~--~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~--------------------------~~~~~~ 51 (177)
T PF13439_consen 1 ILITNIF-LP--NIGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEE--------------------------ELVKIF 51 (177)
T ss_dssp -EEECC--TT--SSSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SS--------------------------TEEEE-
T ss_pred CEEEEec-CC--CCChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchh--------------------------hcccee
Confidence 4555544 44 479999999999999999999999999875543331 000000
Q ss_pred EeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHHHHH
Q 010752 167 VDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYL 246 (502)
Q Consensus 167 i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~~~l 246 (502)
...+.. ......+.......+.+.++.. +|| |||+|.+.........
T Consensus 52 ~~~~~~--------------------~~~~~~~~~~~~~~~~~~i~~~------------~~D-iVh~~~~~~~~~~~~~ 98 (177)
T PF13439_consen 52 VKIPYP--------------------IRKRFLRSFFFMRRLRRLIKKE------------KPD-IVHIHGPPAFWIALLA 98 (177)
T ss_dssp --TT-S--------------------STSS--HHHHHHHHHHHHHHHH------------T-S-EEECCTTHCCCHHHHH
T ss_pred eeeecc--------------------cccccchhHHHHHHHHHHHHHc------------CCC-eEEecccchhHHHHHh
Confidence 000000 0011111222334444455443 599 7899987765544333
Q ss_pred HHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccccCCHH
Q 010752 247 KTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPH 326 (502)
Q Consensus 247 k~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~ 326 (502)
. .++|+++++|+......+ ......... .....+++.....+|.++++|+.
T Consensus 99 ~---------~~~~~v~~~H~~~~~~~~-------~~~~~~~~~-------------~~~~~~~~~~~~~~~~ii~vS~~ 149 (177)
T PF13439_consen 99 C---------RKVPIVYTIHGPYFERRF-------LKSKLSPYS-------------YLNFRIERKLYKKADRIIAVSES 149 (177)
T ss_dssp H---------HCSCEEEEE-HHH--HHT-------TTTSCCCHH-------------HHHHCTTHHHHCCSSEEEESSHH
T ss_pred c---------cCCCEEEEeCCCcccccc-------cccccchhh-------------hhhhhhhhhHHhcCCEEEEECHH
Confidence 3 268999999976531000 000000000 00111123336789999999999
Q ss_pred HHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCC
Q 010752 327 YAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEW 362 (502)
Q Consensus 327 ~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~ 362 (502)
.++++.+ +|++.+ ++.+|+||+|++.|
T Consensus 150 ~~~~l~~---~~~~~~------ki~vI~ngid~~~F 176 (177)
T PF13439_consen 150 TKDELIK---FGIPPE------KIHVIYNGIDTDRF 176 (177)
T ss_dssp HHHHHHH---HT--SS-------EEE----B-CCCH
T ss_pred HHHHHHH---hCCccc------CCEEEECCccHHHc
Confidence 9999994 666554 89999999999876
No 90
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.46 E-value=3e-12 Score=132.71 Aligned_cols=203 Identities=17% Similarity=0.113 Sum_probs=129.1
Q ss_pred CCCEEEEEc-CCccchHHHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccc
Q 010752 227 GEDVVFVAN-DWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 305 (502)
Q Consensus 227 ~pDvVih~h-~~~t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~ 305 (502)
+|| +||+| |+.+++.++.+... .++|++.+-+.....+.+ ..+|+
T Consensus 86 ~pD-iv~~~gd~~~~la~a~aa~~-------~~ipv~h~~~g~~s~~~~-------~~~~~------------------- 131 (365)
T TIGR00236 86 KPD-IVLVQGDTTTTLAGALAAFY-------LQIPVGHVEAGLRTGDRY-------SPMPE------------------- 131 (365)
T ss_pred CCC-EEEEeCCchHHHHHHHHHHH-------hCCCEEEEeCCCCcCCCC-------CCCcc-------------------
Confidence 699 89999 57666766666654 589987543211000000 00000
Q ss_pred hHHHHHHHH-HhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCC-cCCCCCCCcccccccccCcchhccch
Q 010752 306 KINWMKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAK 383 (502)
Q Consensus 306 ~~~~~k~~~-~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGv-d~~~~~p~~~~~i~~~~~~~~~~~~k 383 (502)
.+.+..+ ..||.++++|+..++.+.+ .|++.+ ++.+++|++ |...+.+..
T Consensus 132 --~~~r~~~~~~ad~~~~~s~~~~~~l~~---~G~~~~------~I~vign~~~d~~~~~~~~----------------- 183 (365)
T TIGR00236 132 --EINRQLTGHIADLHFAPTEQAKDNLLR---ENVKAD------SIFVTGNTVIDALLTNVEI----------------- 183 (365)
T ss_pred --HHHHHHHHHHHHhccCCCHHHHHHHHH---cCCCcc------cEEEeCChHHHHHHHHHhh-----------------
Confidence 1112222 3589999999999999985 577765 899999997 432221110
Q ss_pred HHHHHHHHHHhCCCCCCCCcEEEEEc-Ccc-cccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCce
Q 010752 384 PLLKEALQAEVGLPVDRNIPVIGFIG-RLE-EQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKA 459 (502)
Q Consensus 384 ~~~k~~l~~~~gl~~~~~~p~i~~iG-rl~-~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~~~~v 459 (502)
..++.++++++. +.+++++.+ |.+ ..||++.+++|+.++.+ +++++++.|.+.....+.+.+.. ...+++
T Consensus 184 -~~~~~~~~~~~~----~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~v 257 (365)
T TIGR00236 184 -AYSSPVLSEFGE----DKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNPVVREPLHKHL-GDSKRV 257 (365)
T ss_pred -ccchhHHHhcCC----CCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCChHHHHHHHHHh-CCCCCE
Confidence 002344555552 234666665 543 46899999999999864 57898888655433333332221 223568
Q ss_pred EEEeecChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 460 RGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 460 ~~~~~~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
.+...........+++.||+++.+| |.+++|||+||+|
T Consensus 258 ~~~~~~~~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~g~P 295 (365)
T TIGR00236 258 HLIEPLEYLDFLNLAANSHLILTDS-----GGVQEEAPSLGKP 295 (365)
T ss_pred EEECCCChHHHHHHHHhCCEEEECC-----hhHHHHHHHcCCC
Confidence 8777776667778999999999988 6678999999998
No 91
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.44 E-value=1.7e-12 Score=146.55 Aligned_cols=225 Identities=18% Similarity=0.209 Sum_probs=149.3
Q ss_pred CCCEEEEEcCCccchHHHHHHHhccCCCCcCCCeEEEEEecCcccccccccc-ccccCCCcccccccccccCCCCCcccc
Q 010752 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGR 305 (502)
Q Consensus 227 ~pDvVih~h~~~t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~-~~~l~lp~~~~~~~~~~~~~~~~~~~~ 305 (502)
++|.+|.+||+|..++|.++++.. .++++.|-+|.. ||.+. |..+.
T Consensus 230 ~~gD~VWVHDYHL~LlP~~LR~~~------p~~~IGfFlHiP-----FPs~Eifr~LP---------------------- 276 (934)
T PLN03064 230 EEGDVVWCHDYHLMFLPKCLKEYN------SNMKVGWFLHTP-----FPSSEIHRTLP---------------------- 276 (934)
T ss_pred CCCCEEEEecchhhHHHHHHHHhC------CCCcEEEEecCC-----CCChHHHhhCC----------------------
Confidence 353399999999999999999876 789999999943 22211 11111
Q ss_pred hHHHHHHHHHhcCccccCCHHHHHHHHcCC--CCCCc--chhh---hccccEEEeeCCCcCCCCCCCcccccccccCcch
Q 010752 306 KINWMKAGILESDMVLTVSPHYAQELVSGE--DKGVE--LDNI---IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 378 (502)
Q Consensus 306 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~--~~g~~--~~~~---~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~ 378 (502)
.-..+-.++..||.|-+.+..+++.+.+.- ..|.+ .+.+ -+...+.++|-|||.+.|......
T Consensus 277 ~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~---------- 346 (934)
T PLN03064 277 SRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALET---------- 346 (934)
T ss_pred cHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcC----------
Confidence 113334567899999999999999877521 11211 1111 112346778999999887543210
Q ss_pred hccchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc--CC----eEEEEEe-----CCCh--hhH
Q 010752 379 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN----VQIIVLG-----TGKK--PME 445 (502)
Q Consensus 379 ~~~~k~~~k~~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~--~~----v~lvivG-----~g~~--~~~ 445 (502)
..-++..+++++.++ +..+|+.++|+++.||+...+.|++++.+ |+ +.|+-+. +++. .++
T Consensus 347 --~~v~~~~~~lr~~~~-----g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~ 419 (934)
T PLN03064 347 --PQVQQHIKELKERFA-----GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLT 419 (934)
T ss_pred --hhHHHHHHHHHHHhC-----CceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHH
Confidence 111233467777765 46699999999999999999999999765 33 4444333 2221 233
Q ss_pred HHHHHHHHHCCCc--------eEEEe-ecChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCC
Q 010752 446 KQLEQLEILYPEK--------ARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT 501 (502)
Q Consensus 446 ~~l~~l~~~~~~~--------v~~~~-~~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~ 501 (502)
.++.++..+.+.+ +.... .++.+++.++|+.||++|+||..|+++++.+|+|+|+.
T Consensus 420 ~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~~ 484 (934)
T PLN03064 420 SQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQD 484 (934)
T ss_pred HHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhhc
Confidence 4455544443211 22222 24667788999999999999999999999999999953
No 92
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.43 E-value=8.2e-13 Score=118.49 Aligned_cols=159 Identities=23% Similarity=0.246 Sum_probs=86.7
Q ss_pred ccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceEEEEeCCcccccccCCC
Q 010752 101 GGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKT 180 (502)
Q Consensus 101 GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~i~~p~~~~~~~~~~ 180 (502)
||++.++.+|+++|+++||+|+|+++..+...+. ....|+++..++.+.....
T Consensus 1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~----- 53 (160)
T PF13579_consen 1 GGIERYVRELARALAARGHEVTVVTPQPDPEDDE----------------------EEEDGVRVHRLPLPRRPWP----- 53 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEEE---GGG-S----------------------EEETTEEEEEE--S-SSSG-----
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEecCCCCcccc----------------------cccCCceEEeccCCccchh-----
Confidence 8999999999999999999999999876544321 1235777776653322100
Q ss_pred CCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHHHHHHHhccCCCCcCCCe
Q 010752 181 QSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAK 260 (502)
Q Consensus 181 ~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~~~lk~~~~~~~~~~~~p 260 (502)
+. .. + +...+.+.+... ..+|| |||+|++.+++++.+++.. .++|
T Consensus 54 ---~~----------~~-~---~~~~~~~~l~~~----------~~~~D-vv~~~~~~~~~~~~~~~~~-------~~~p 98 (160)
T PF13579_consen 54 ---LR----------LL-R---FLRRLRRLLAAR----------RERPD-VVHAHSPTAGLVAALARRR-------RGIP 98 (160)
T ss_dssp ---GG----------HC-C---HHHHHHHHCHHC----------T---S-EEEEEHHHHHHHHHHHHHH-------HT--
T ss_pred ---hh----------hH-H---HHHHHHHHHhhh----------ccCCe-EEEecccchhHHHHHHHHc-------cCCc
Confidence 00 00 0 112222233111 12699 9999997766667666633 4899
Q ss_pred EEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchH-HHHHHHHHhcCccccCCHHHHHHHHcCCCCCC
Q 010752 261 VVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI-NWMKAGILESDMVLTVSPHYAQELVSGEDKGV 339 (502)
Q Consensus 261 vv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~-~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~ 339 (502)
+++++|+...... ..+ ..+.. .+.+..++.||.++++|+..++.+.+ +|+
T Consensus 99 ~v~~~h~~~~~~~------------~~~--------------~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~---~g~ 149 (160)
T PF13579_consen 99 LVVTVHGTLFRRG------------SRW--------------KRRLYRWLERRLLRRADRVIVVSEAMRRYLRR---YGV 149 (160)
T ss_dssp EEEE-SS-T------------------H--------------HHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH---H--
T ss_pred EEEEECCCchhhc------------cch--------------hhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH---hCC
Confidence 9999996432110 000 01122 33467789999999999999999995 677
Q ss_pred cchhhhccccEEEeeCC
Q 010752 340 ELDNIIRKTGIKGIVNG 356 (502)
Q Consensus 340 ~~~~~~~~~~i~vI~NG 356 (502)
+.+ ++.+||||
T Consensus 150 ~~~------ri~vipnG 160 (160)
T PF13579_consen 150 PPD------RIHVIPNG 160 (160)
T ss_dssp -GG------GEEE----
T ss_pred CCC------cEEEeCcC
Confidence 666 89999998
No 93
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.36 E-value=1.2e-10 Score=121.80 Aligned_cols=146 Identities=17% Similarity=0.104 Sum_probs=97.1
Q ss_pred HHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHH
Q 010752 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (502)
Q Consensus 314 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~ 393 (502)
.+.+|+|+++++...+.+.. .|+ +..++.|++-........ .+++.+++
T Consensus 136 ~~~~d~v~~~~~~e~~~~~~---~g~---------~~~~vGnPv~~~~~~~~~-------------------~~~~~r~~ 184 (385)
T TIGR00215 136 EKATDFLLAILPFEKAFYQK---KNV---------PCRFVGHPLLDAIPLYKP-------------------DRKSAREK 184 (385)
T ss_pred HHHHhHhhccCCCcHHHHHh---cCC---------CEEEECCchhhhccccCC-------------------CHHHHHHH
Confidence 56799999999998877763 222 345666766221111000 13455777
Q ss_pred hCCCCCCCCcEEEEE--cCccc-ccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeecC
Q 010752 394 VGLPVDRNIPVIGFI--GRLEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFN 466 (502)
Q Consensus 394 ~gl~~~~~~p~i~~i--Grl~~-~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~ 466 (502)
+|++ ++.++|++. ||..+ .|+...+++|++.+.+ +++++++.+.... ..+.++++.+.++ .++... .
T Consensus 185 lgl~--~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~-~~~~~~~~~~~~~~~~~v~~~---~ 258 (385)
T TIGR00215 185 LGID--HNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK-RRLQFEQIKAEYGPDLQLHLI---D 258 (385)
T ss_pred cCCC--CCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch-hHHHHHHHHHHhCCCCcEEEE---C
Confidence 8875 466777665 37777 7999999999999865 5788877554321 3445566555553 233322 2
Q ss_pred hHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 467 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 467 ~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
. .+..+|+.||++|.+| |.+.+|||++|+|
T Consensus 259 ~-~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P 288 (385)
T TIGR00215 259 G-DARKAMFAADAALLAS-----GTAALEAALIKTP 288 (385)
T ss_pred c-hHHHHHHhCCEEeecC-----CHHHHHHHHcCCC
Confidence 2 3457999999999999 7888899999998
No 94
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.30 E-value=6.7e-10 Score=113.96 Aligned_cols=137 Identities=13% Similarity=0.003 Sum_probs=94.4
Q ss_pred HHHHHHHHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHH
Q 010752 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (502)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k 387 (502)
.+++..++.||.++++|+.+++.+.+ .|+..+ ++.+++|..+.....+.
T Consensus 115 ~~~~~~~~~aD~iI~~S~~~~~~l~~---~g~~~~------~i~~~~~~~~~~~~~~~---------------------- 163 (333)
T PRK09814 115 KEEIDMLNLADVLIVHSKKMKDRLVE---EGLTTD------KIIVQGIFDYLNDIELV---------------------- 163 (333)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHH---cCCCcC------ceEeccccccccccccc----------------------
Confidence 55677788999999999999999985 455433 56655554432111110
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecCh
Q 010752 388 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 467 (502)
Q Consensus 388 ~~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~ 467 (502)
+.....+.|+|+|++...+++ + . ..++++|+++|+|+.. + ...+++.+.+.++.
T Consensus 164 ---------~~~~~~~~i~yaG~l~k~~~l----~---~-~~~~~~l~i~G~g~~~--~-------~~~~~V~f~G~~~~ 217 (333)
T PRK09814 164 ---------KTPSFQKKINFAGNLEKSPFL----K---N-WSQGIKLTVFGPNPED--L-------ENSANISYKGWFDP 217 (333)
T ss_pred ---------ccccCCceEEEecChhhchHH----H---h-cCCCCeEEEECCCccc--c-------ccCCCeEEecCCCH
Confidence 001245589999999943321 1 1 2367899999999732 1 24467999999999
Q ss_pred HHHHHHHHhcCEEEEcCCC-----------CCCcHHHHHHHHcCCC
Q 010752 468 PLAHMIIAGADFILIPSRF-----------EPCGLIQLHAMRYGTV 502 (502)
Q Consensus 468 ~~~~~ila~ADi~l~PS~~-----------E~fglv~lEAma~G~P 502 (502)
+++..+|+. |+.+++... -.+|..+.|+|+||+|
T Consensus 218 eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~P 262 (333)
T PRK09814 218 EELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLP 262 (333)
T ss_pred HHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCC
Confidence 999888988 777775421 2578889999999998
No 95
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.26 E-value=1.1e-10 Score=122.65 Aligned_cols=167 Identities=16% Similarity=0.107 Sum_probs=112.2
Q ss_pred HHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHH
Q 010752 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (502)
Q Consensus 314 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~ 393 (502)
...+|++++.|..++..+.. ... .+ ...++.+.+.++|.+.+.+.- | +.+.+.++..+.+
T Consensus 207 ~~~~~~~~~ns~~~~~~f~~-~~~--~L----~~~d~~~~y~ei~~s~~~~~~-------~------~~~~~~~~~~r~~ 266 (495)
T KOG0853|consen 207 TGLAWKILVNSYFTKRQFKA-TFV--SL----SNSDITSTYPEIDGSWFTYGQ-------Y------ESHLELRLPVRLY 266 (495)
T ss_pred hhccceEecchhhhhhhhhh-hhh--hc----CCCCcceeeccccchhccccc-------c------ccchhccccccee
Confidence 44688999999988887774 111 11 122578889999987666521 1 1122223333333
Q ss_pred hCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc-------CCeEEEEEeCC--C------hhhHHHHHHHHHHCC--
Q 010752 394 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-------ENVQIIVLGTG--K------KPMEKQLEQLEILYP-- 456 (502)
Q Consensus 394 ~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~-------~~v~lvivG~g--~------~~~~~~l~~l~~~~~-- 456 (502)
.|.. .....+..+.|+++.||++++++++.++.. .+.+++++|+. + ..+.+++.++.+++.
T Consensus 267 ~~v~--~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~ 344 (495)
T KOG0853|consen 267 RGVS--GIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLL 344 (495)
T ss_pred eeec--ccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCcc
Confidence 3332 234578889999999999999999988765 25788888832 1 145667778888774
Q ss_pred -CceEEEeecChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 457 -EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 457 -~~v~~~~~~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
+.+.+....+......+++.+...++....|+||+|.+|||+||+|
T Consensus 345 g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glP 391 (495)
T KOG0853|consen 345 GQFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGLP 391 (495)
T ss_pred CceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCCC
Confidence 2233334444444556777888888877779999999999999998
No 96
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.13 E-value=1e-09 Score=108.65 Aligned_cols=149 Identities=28% Similarity=0.423 Sum_probs=110.6
Q ss_pred hcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhC
Q 010752 316 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 395 (502)
Q Consensus 316 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~g 395 (502)
..+.+++.++.....+.. . ....++..++|+++.+.+.+.. .+
T Consensus 150 ~~~~~~~~~~~~~~~~~~---~-------~~~~~~~~~~~~~~~~~~~~~~---------------------------~~ 192 (381)
T COG0438 150 LADRVIAVSPALKELLEA---L-------GVPNKIVVIPNGIDTEKFAPAR---------------------------IG 192 (381)
T ss_pred cccEEEECCHHHHHHHHH---h-------CCCCCceEecCCcCHHHcCccc---------------------------cC
Confidence 378888898887555542 1 1112578999999988776420 01
Q ss_pred CCCCCCCcEEEEEcCcccccCHHHHHHHHhhcccC--CeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeecChHHHH
Q 010752 396 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAH 471 (502)
Q Consensus 396 l~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~~--~v~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~ 471 (502)
+..+.....++++||+.+.||++.+++++..+.+. +++++++|.+... .+.+.++..++. +++.+.+..+.+...
T Consensus 193 ~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 271 (381)
T COG0438 193 LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER-REELEKLAKKLGLEDNVKFLGYVPDEELA 271 (381)
T ss_pred CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc-HHHHHHHHHHhCCCCcEEEecccCHHHHH
Confidence 11111136899999999999999999999999773 4899999998743 334444555543 567787777756666
Q ss_pred HHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 472 MIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 472 ~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
.+++.||++++||.+|+||++++|||++|+|
T Consensus 272 ~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g~p 302 (381)
T COG0438 272 ELLASADVFVLPSLSEGFGLVLLEAMAAGTP 302 (381)
T ss_pred HHHHhCCEEEeccccccchHHHHHHHhcCCc
Confidence 7999999999999999999999999999998
No 97
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.10 E-value=1.5e-09 Score=107.32 Aligned_cols=148 Identities=13% Similarity=0.114 Sum_probs=108.2
Q ss_pred HhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHh
Q 010752 315 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 394 (502)
Q Consensus 315 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~ 394 (502)
..||.+++.|.++.+.+.+ -.+ .....+|+..-+++. +....
T Consensus 221 ~~ad~vm~NssWT~nHI~q--iW~--------~~~~~iVyPPC~~e~----------------------------lks~~ 262 (465)
T KOG1387|consen 221 SKADIVMTNSSWTNNHIKQ--IWQ--------SNTCSIVYPPCSTED----------------------------LKSKF 262 (465)
T ss_pred ccceEEEecchhhHHHHHH--Hhh--------ccceeEEcCCCCHHH----------------------------HHHHh
Confidence 4689999999999988775 111 125566655444432 22323
Q ss_pred CCCCCCCCcEEEEEcCcccccCHH-HHHHHHhhccc------CCeEEEEEeCCC-h---hhHHHHHHHHHHC--CCceEE
Q 010752 395 GLPVDRNIPVIGFIGRLEEQKGSD-ILAAAIPHFIK------ENVQIIVLGTGK-K---PMEKQLEQLEILY--PEKARG 461 (502)
Q Consensus 395 gl~~~~~~p~i~~iGrl~~~KG~d-~ll~Al~~L~~------~~v~lvivG~g~-~---~~~~~l~~l~~~~--~~~v~~ 461 (502)
+- .+.+.+.++++|.+.|+|+.. +=++|+-...+ .+++|+++|+.- + +.-+.++.+++.+ +.++.+
T Consensus 263 ~t-e~~r~~~ll~l~Q~RPEKnH~~Lql~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F 341 (465)
T KOG1387|consen 263 GT-EGERENQLLSLAQFRPEKNHKILQLFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQF 341 (465)
T ss_pred cc-cCCcceEEEEEeecCcccccHHHHHHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEE
Confidence 32 345778999999999999999 44555544433 379999999853 2 2334566666654 477888
Q ss_pred EeecChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCC
Q 010752 462 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT 501 (502)
Q Consensus 462 ~~~~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~ 501 (502)
....+-+.+-.+|..|.+.+..-..|-||+.++|+||.|+
T Consensus 342 ~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGl 381 (465)
T KOG1387|consen 342 EKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGL 381 (465)
T ss_pred EecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCc
Confidence 8888888888999999999999999999999999999996
No 98
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.06 E-value=3.1e-10 Score=100.09 Aligned_cols=92 Identities=32% Similarity=0.431 Sum_probs=68.0
Q ss_pred CcEEEEEcCcccccCHHHHHH-HHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcC
Q 010752 402 IPVIGFIGRLEEQKGSDILAA-AIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 478 (502)
Q Consensus 402 ~p~i~~iGrl~~~KG~d~ll~-Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~AD 478 (502)
.++|+++|++.+.||++.+++ +++++.+ ++++|+++|.+++ +++++ . ..++.+.+.. +++.++++.||
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~----~l~~~-~--~~~v~~~g~~--~e~~~~l~~~d 72 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD----ELKRL-R--RPNVRFHGFV--EELPEILAAAD 72 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS-----HHCCH-H--HCTEEEE-S---HHHHHHHHC-S
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH----HHHHh-c--CCCEEEcCCH--HHHHHHHHhCC
Confidence 468999999999999999999 9999876 6899999999764 25544 1 2368998887 46788999999
Q ss_pred EEEEcCC-CCCCcHHHHHHHHcCCC
Q 010752 479 FILIPSR-FEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 479 i~l~PS~-~E~fglv~lEAma~G~P 502 (502)
+++.|+. .|+++.+++|||++|+|
T Consensus 73 v~l~p~~~~~~~~~k~~e~~~~G~p 97 (135)
T PF13692_consen 73 VGLIPSRFNEGFPNKLLEAMAAGKP 97 (135)
T ss_dssp EEEE-BSS-SCC-HHHHHHHCTT--
T ss_pred EEEEEeeCCCcCcHHHHHHHHhCCC
Confidence 9999997 48999999999999998
No 99
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.00 E-value=6e-09 Score=110.22 Aligned_cols=224 Identities=16% Similarity=0.125 Sum_probs=150.1
Q ss_pred CCCEEEEEcCCccchHHHHHHHhccCCCCcCCCeEEEEEecCcccccccccc-ccccCCCcccccccccccCCCCCcccc
Q 010752 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGR 305 (502)
Q Consensus 227 ~pDvVih~h~~~t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~-~~~l~lp~~~~~~~~~~~~~~~~~~~~ 305 (502)
+||.+|..||+|..++|.+++++. .+.++.|-+|.. ||.++ |..+ |
T Consensus 122 ~~~D~VWVHDYhL~llp~~LR~~~------~~~~IgFFlHiP-----FPs~eifr~L--P-------------------- 168 (474)
T PRK10117 122 KDDDIIWIHDYHLLPFASELRKRG------VNNRIGFFLHIP-----FPTPEIFNAL--P-------------------- 168 (474)
T ss_pred CCCCEEEEeccHhhHHHHHHHHhC------CCCcEEEEEeCC-----CCChHHHhhC--C--------------------
Confidence 343399999999999999999876 688999999943 22211 1111 1
Q ss_pred hHHHHHHHHHhcCccccCCHHHHHHHHcCC--CCCCcc---hhh---hccccEEEeeCCCcCCCCCCCcccccccccCcc
Q 010752 306 KINWMKAGILESDMVLTVSPHYAQELVSGE--DKGVEL---DNI---IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAS 377 (502)
Q Consensus 306 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~--~~g~~~---~~~---~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~ 377 (502)
.-..+-.++..+|.|-+.++.+++.+.+.. ..|.+. ..+ -+...+.+.|-|||++.|......
T Consensus 169 ~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~--------- 239 (474)
T PRK10117 169 PHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAG--------- 239 (474)
T ss_pred ChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhc---------
Confidence 113344567899999999999998877521 112111 001 122357778889998776432110
Q ss_pred hhccchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc--C----CeEEEEEeCCC----h---hh
Q 010752 378 TVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGK----K---PM 444 (502)
Q Consensus 378 ~~~~~k~~~k~~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~--~----~v~lvivG~g~----~---~~ 444 (502)
.. ....+++++.++ +..+|+-+.|+++.||+..=++|++.|.+ | ++.|+-+.... + .+
T Consensus 240 ---~~-~~~~~~lr~~~~-----~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l 310 (474)
T PRK10117 240 ---PL-PPKLAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDI 310 (474)
T ss_pred ---hH-HHHHHHHHHHcC-----CCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHH
Confidence 11 222455666654 46699999999999999999999999887 2 68888776432 1 34
Q ss_pred HHHHHHHHHHCCCc--------eEEEe-ecChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCC
Q 010752 445 EKQLEQLEILYPEK--------ARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT 501 (502)
Q Consensus 445 ~~~l~~l~~~~~~~--------v~~~~-~~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~ 501 (502)
..+++++..+.+++ +.... .++.+++-.+|+.||+++++|..+|..|+..|..+|..
T Consensus 311 ~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~ 376 (474)
T PRK10117 311 RHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQD 376 (474)
T ss_pred HHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeec
Confidence 45566665543211 22211 23556777899999999999999999999999988753
No 100
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=98.99 E-value=1.5e-08 Score=108.17 Aligned_cols=226 Identities=19% Similarity=0.215 Sum_probs=129.8
Q ss_pred CCCEEEEEcCCccchHHHHHHHhccCCCCcCCCeEEEEEecCcccccccccc-ccccCCCcccccccccccCCCCCcccc
Q 010752 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGR 305 (502)
Q Consensus 227 ~pDvVih~h~~~t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~-~~~l~lp~~~~~~~~~~~~~~~~~~~~ 305 (502)
++|.+|..||+|-.++|.+++++. .++++.|-.|.. ||.++ |..+.
T Consensus 140 ~~~D~VWVhDYhL~llP~~LR~~~------~~~~IgfFlHiP-----FPs~e~fr~lP---------------------- 186 (474)
T PF00982_consen 140 RPGDLVWVHDYHLMLLPQMLRERG------PDARIGFFLHIP-----FPSSEIFRCLP---------------------- 186 (474)
T ss_dssp -TT-EEEEESGGGTTHHHHHHHTT--------SEEEEEE-S---------HHHHTTST----------------------
T ss_pred cCCCEEEEeCCcHHHHHHHHHhhc------CCceEeeEEecC-----CCCHHHHhhCC----------------------
Confidence 454499999999999999999976 789999999943 22211 11221
Q ss_pred hHHHHHHHHHhcCccccCCHHHHHHHHcCC--CCCCcchhh-------hccccEEEeeCCCcCCCCCCCcccccccccCc
Q 010752 306 KINWMKAGILESDMVLTVSPHYAQELVSGE--DKGVELDNI-------IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDA 376 (502)
Q Consensus 306 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~--~~g~~~~~~-------~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~ 376 (502)
.-..+-.++..||.|-+.++.+++.+.+.- ..|.+.+.- -+...+.+.|-|||++.+.....
T Consensus 187 ~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~--------- 257 (474)
T PF00982_consen 187 WREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLAR--------- 257 (474)
T ss_dssp THHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH---------
T ss_pred cHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhcc---------
Confidence 124445578899999999999999876521 222221110 11235667788888876632110
Q ss_pred chhccchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc------CCeEEEEEeCCC----h---h
Q 010752 377 STVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----K---P 443 (502)
Q Consensus 377 ~~~~~~k~~~k~~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~------~~v~lvivG~g~----~---~ 443 (502)
...-.+..++++++++- +..+|+-+.|+++.||+..=+.|+.+|.+ .++.|+-++... + .
T Consensus 258 ---~~~v~~~~~~l~~~~~~----~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~ 330 (474)
T PF00982_consen 258 ---SPEVQERAEELREKFKG----KRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQE 330 (474)
T ss_dssp ----S---HHHHHHHHHTTT-----SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHH
T ss_pred ---ChHHHHHHHHHHHhcCC----CcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHH
Confidence 01112334667777651 35799999999999999999999999877 268888777522 2 2
Q ss_pred hHHHHHHHHHH----CCC----ceEEEe-ecChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCC
Q 010752 444 MEKQLEQLEIL----YPE----KARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT 501 (502)
Q Consensus 444 ~~~~l~~l~~~----~~~----~v~~~~-~~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~ 501 (502)
+.++++++..+ ++. -|.... ..+.++.-++|+.||+++++|..||..++..|..+|..
T Consensus 331 ~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q~ 397 (474)
T PF00982_consen 331 LRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQD 397 (474)
T ss_dssp HHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS-
T ss_pred HHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEec
Confidence 44555555553 331 133333 35567777999999999999999999999999998853
No 101
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=98.88 E-value=2.5e-08 Score=109.23 Aligned_cols=382 Identities=20% Similarity=0.240 Sum_probs=228.4
Q ss_pred cccHHHHHhhhHHHHHHCCCeEEEEEecCCC--------------CccccCC------------ceE--EEEEeCC-eee
Q 010752 100 TGGLGDVLGGLPPALAANGHRVMTIAPRYDQ--------------YKDAWDT------------DVV--IELKVGD-KIE 150 (502)
Q Consensus 100 ~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~--------------~~~~~~~------------~~~--~~~~~~~-~~~ 150 (502)
.||+|...+.....++..|...+-+.-+|.+ .++.|.. ... ..+...+ ...
T Consensus 114 gGGLGrLAgcfldS~a~Lg~P~~G~Gl~Y~~GyF~Q~~~dG~Q~E~p~~w~~~~~pwe~~r~~~a~~~d~~V~g~~~~~~ 193 (750)
T COG0058 114 GGGLGRLAGCFLDSAADLGLPLTGYGLRYRYGYFRQSDVDGWQVELPDEWLKYGNPWEFLRDAEGVPYDVPVPGYDNRVV 193 (750)
T ss_pred cccHHHHHHhHHHHHHhcCCCceEEEeeecCCceeeeccCCceEecchhhhccCCcceeecccCCceeeeeEEeccCcEE
Confidence 3999999999999999999999998877652 1222321 122 2333444 566
Q ss_pred EEEEEEEeecCceEEEEeCCcccccccCC-CCCcccCCCCCCCCcchHHHHH---HHHHHHHHhhhhhc-ccCCCCCCCC
Q 010752 151 KVRFFHCHKRGVDRVFVDHPWFLAKVWGK-TQSKIYGPRTGEDYQDNQLRFS---LLCQAALEAPRILN-LNSNKYFSGP 225 (502)
Q Consensus 151 ~~~~~~~~~~gv~v~~i~~p~~~~~~~~~-~~~~~y~~~~g~~~~~~~~r~~---~~~~a~~~~~~~l~-~~~~~~~~~~ 225 (502)
+++.+......+++++.+...--.+-+.+ .-..+|++.. +..|+. +++.+.++.+..+. .. .+.
T Consensus 194 ~lrlW~a~~~~~~~~l~~~n~~e~~~~~~~iT~~LYp~Ds------~elRl~Qeyfl~~agvq~I~~~~~~~-----~~~ 262 (750)
T COG0058 194 TLRLWQAQVGRVPLYLLDFNVGENKNDARNITRVLYPGDS------KELRLKQEYFLGSAGVQDILARGHLE-----HHD 262 (750)
T ss_pred EEEEEEEecCccceEeecCCCcccchhhhhHHhhcCCCCc------HHHHHhhhheeeeHHHHHHHHHhhhc-----ccc
Confidence 77888877777788887643211111111 2235676321 455552 34555556555541 11 011
Q ss_pred CCCCEEEEEcCCccchHHHH-HHHhccCCCC-------cCCCeEEEEEecCcccc--ccccccccccCCCccccccc---
Q 010752 226 YGEDVVFVANDWHTSLIPCY-LKTMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPAQFKSSF--- 292 (502)
Q Consensus 226 ~~pDvVih~h~~~t~~~~~~-lk~~~~~~~~-------~~~~pvv~tiH~~~~~g--~~~~~~~~~l~lp~~~~~~~--- 292 (502)
+.+. +.|.||-|.+++..- .+.....+|+ ....-.+||.|.....+ .|+...+..+ +|+.+.--.
T Consensus 263 ~~~~-~~~lNdtHpa~~i~ElmRll~d~~g~~~~~A~~~~~~~~~yTnHTplpeale~wp~~l~~~~-lpr~~~ii~~in 340 (750)
T COG0058 263 LDVL-ADHLNDTHPALAIPELMRLLIDEEGLSWDEAWEIVRKTFVYTNHTPLPEALETWPVELFKKL-LPRHLQIIYEIN 340 (750)
T ss_pred ccch-hhhhcCCChhHhHHHHHHHHHHHhcCCHHHHHHHHhheeeeecCCCchhhhccCCHHHHHHH-hhhhhhhHHHHH
Confidence 2344 778999888776443 3434433443 12457899999876544 3444333111 111100000
Q ss_pred ---------cc---ccCCCCCcccchHHHHHHHHHhcCccccCCHHHHHHHHcC---CCCCCcchhhhccccEEEeeCCC
Q 010752 293 ---------DF---IDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSG---EDKGVELDNIIRKTGIKGIVNGM 357 (502)
Q Consensus 293 ---------~~---~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~---~~~g~~~~~~~~~~~i~vI~NGv 357 (502)
.. ...-..|+.. ++|---++..|..|..||+-+.+.+.+. .+.++.+ .+|.-+.|||
T Consensus 341 ~~~l~~~~~~~~~~~~~~~~~i~~--v~Ma~lal~~S~~vNGVsklH~el~k~~~~~~~~~~~p------~~i~nvTNGI 412 (750)
T COG0058 341 ARFLPEVRLLYLGDLIRRGSPIEE--VNMAVLALVGSHSVNGVSKLHSELSKKMWFADFHGLYP------EKINNVTNGI 412 (750)
T ss_pred hhhhHHHHhhccccccccCCcccc--eehhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhcccCc------cccccccCCc
Confidence 00 0000001111 3333445677888999998887766531 2333333 3788999999
Q ss_pred cCCCCCCCcccccccccCcc--------------------------hhccchHHHH----HHHHHHhCCCCCCCCcEEEE
Q 010752 358 DVQEWNPLTDKYIGVKYDAS--------------------------TVMDAKPLLK----EALQAEVGLPVDRNIPVIGF 407 (502)
Q Consensus 358 d~~~~~p~~~~~i~~~~~~~--------------------------~~~~~k~~~k----~~l~~~~gl~~~~~~p~i~~ 407 (502)
....|--...+-+.-.++.. .+...|.++| +....+.|+.++++...++|
T Consensus 413 t~rrWl~~~n~~L~~~~~~~ig~~W~~~~~~l~~l~~~a~~~~~~e~i~~iK~~nk~~La~~i~~~~gi~~~p~~lfd~~ 492 (750)
T COG0058 413 TPRRWLAPANPGLADLLDEKIGDEWLNDLDILDELLWFADDKAFRELIAEIKRENKKRLAEEIADRTGIEVDPNALFDGQ 492 (750)
T ss_pred CCchhhhhhhHHHHHHHhhhhhhhhhhhhhhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhhhcCCccCCCcceeee
Confidence 99998533322222222222 1223444444 44556888899999999999
Q ss_pred EcCcccccCHHHHHHHHhh----ccc---CCeEEEEEeCCChh------hHHHHHHHHHHC--CCceEEEeecChHHHHH
Q 010752 408 IGRLEEQKGSDILAAAIPH----FIK---ENVQIIVLGTGKKP------MEKQLEQLEILY--PEKARGVAKFNIPLAHM 472 (502)
Q Consensus 408 iGrl~~~KG~d~ll~Al~~----L~~---~~v~lvivG~g~~~------~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~ 472 (502)
+-|+.+.|.+++.+.-+.. +++ +.+++++.|...|. ..+.+...++.. ..+|.|+..++...+..
T Consensus 493 ~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~nYdvslA~~ 572 (750)
T COG0058 493 ARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLPNYDVSLAEL 572 (750)
T ss_pred ehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeCCCChhHHHh
Confidence 9999999998875544433 332 46888888876542 222333333332 25689999999999999
Q ss_pred HHHhcCEEEEcCCC--CCCcHHHHHHHHcCCC
Q 010752 473 IIAGADFILIPSRF--EPCGLIQLHAMRYGTV 502 (502)
Q Consensus 473 ila~ADi~l~PS~~--E~fglv~lEAma~G~P 502 (502)
++.+||+.+..|+- |.+|..-+-||..|.+
T Consensus 573 iipa~Dvweqis~a~~EASGTsnMK~alNGal 604 (750)
T COG0058 573 LIPAADVWEQIPTAGKEASGTSNMKAALNGAL 604 (750)
T ss_pred hcccccccccCCCCCccccCcCcchHHhcCCc
Confidence 99999999999874 9999999999998864
No 102
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=98.86 E-value=1.2e-06 Score=90.65 Aligned_cols=101 Identities=22% Similarity=0.259 Sum_probs=58.4
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCH-HHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecC
Q 010752 388 EALQAEVGLPVDRNIPVIGFIGRLEEQKGS-DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 466 (502)
Q Consensus 388 ~~l~~~~gl~~~~~~p~i~~iGrl~~~KG~-d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~ 466 (502)
++.++.+|++ ++.|+|+.+|-=.--+.+ +.+.+++..+. .+++++++ .|+...++.+.. +. ++.. ..|-
T Consensus 173 ~~~~~~~~l~--~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~-~~~~vv~~-~G~~~~~~~~~~----~~-~~~~-~~f~ 242 (352)
T PRK12446 173 EKGLAFLGFS--RKKPVITIMGGSLGAKKINETVREALPELL-LKYQIVHL-CGKGNLDDSLQN----KE-GYRQ-FEYV 242 (352)
T ss_pred hHHHHhcCCC--CCCcEEEEECCccchHHHHHHHHHHHHhhc-cCcEEEEE-eCCchHHHHHhh----cC-CcEE-ecch
Confidence 3445566764 466777666543333444 33444555553 34776653 233223333322 22 2222 2343
Q ss_pred hHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 467 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 467 ~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
.+.+.++|+.||++|.= +-+.++.|++++|+|
T Consensus 243 ~~~m~~~~~~adlvIsr----~G~~t~~E~~~~g~P 274 (352)
T PRK12446 243 HGELPDILAITDFVISR----AGSNAIFEFLTLQKP 274 (352)
T ss_pred hhhHHHHHHhCCEEEEC----CChhHHHHHHHcCCC
Confidence 45677899999988854 447899999999998
No 103
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=98.86 E-value=2.5e-08 Score=113.32 Aligned_cols=223 Identities=14% Similarity=0.191 Sum_probs=150.2
Q ss_pred CEEEEEcCCccchHHHHHHHhccCCCCcCCCeEEEEEecCcccccccccc-ccccCCCcccccccccccCCCCCcccchH
Q 010752 229 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGRKI 307 (502)
Q Consensus 229 DvVih~h~~~t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~-~~~l~lp~~~~~~~~~~~~~~~~~~~~~~ 307 (502)
| +|..||+|..++|.+++++. .++++.|-.|.. ||.+. |..+ | .-
T Consensus 203 d-~VWVhDYhL~llP~~LR~~~------~~~~IgfFlHiP-----FPs~eifr~L--P--------------------~r 248 (854)
T PLN02205 203 D-FVWIHDYHLMVLPTFLRKRF------NRVKLGFFLHSP-----FPSSEIYKTL--P--------------------IR 248 (854)
T ss_pred C-EEEEeCchhhHHHHHHHhhC------CCCcEEEEecCC-----CCChHHHhhC--C--------------------cH
Confidence 6 99999999999999999876 789999999943 22221 1111 1 11
Q ss_pred HHHHHHHHhcCccccCCHHHHHHHHcCC--CCCCcchh---------hhccccEEEeeCCCcCCCCCCCcccccccccCc
Q 010752 308 NWMKAGILESDMVLTVSPHYAQELVSGE--DKGVELDN---------IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDA 376 (502)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~--~~g~~~~~---------~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~ 376 (502)
..+-.++..||.|-+.+..+++.+.+.- ..|.+.+. .-+...+...|-|||.+.|......
T Consensus 249 ~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~-------- 320 (854)
T PLN02205 249 EELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL-------- 320 (854)
T ss_pred HHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcC--------
Confidence 3334567899999999999999877521 12222111 0133457778889998776432110
Q ss_pred chhccchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc--C----CeEEEEEeCCC----h---h
Q 010752 377 STVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGK----K---P 443 (502)
Q Consensus 377 ~~~~~~k~~~k~~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~--~----~v~lvivG~g~----~---~ 443 (502)
.......++++++++- +++.+|+-+.|+++.||+..=+.|+++|.+ | ++.|+.+.... + +
T Consensus 321 ----~~~~~~~~~l~~~~~~---~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~ 393 (854)
T PLN02205 321 ----PETEAKVKELIKQFCD---QDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKE 393 (854)
T ss_pred ----hhHHHHHHHHHHHhcc---CCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHH
Confidence 1112234566766642 256799999999999999999999999876 2 67777766421 1 2
Q ss_pred hHHHHHHHHHH----CCC----ceEEEe-ecChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcC
Q 010752 444 MEKQLEQLEIL----YPE----KARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYG 500 (502)
Q Consensus 444 ~~~~l~~l~~~----~~~----~v~~~~-~~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G 500 (502)
+..+++++..+ ++. -|.+.. .++.++.-++|+.||+++++|..+|.-|+..|..+|.
T Consensus 394 ~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~ 459 (854)
T PLN02205 394 VQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISR 459 (854)
T ss_pred HHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEc
Confidence 44455555554 321 133332 2456777789999999999999999999999998774
No 104
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=98.85 E-value=1.3e-07 Score=88.25 Aligned_cols=182 Identities=18% Similarity=0.300 Sum_probs=112.0
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v 164 (502)
.||++|++---| +..||.|+++.+|+..|+++||+|+|.|........ ....+|+++
T Consensus 2 kkIaIiGtrGIP-a~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~----------------------~~~y~gv~l 58 (185)
T PF09314_consen 2 KKIAIIGTRGIP-ARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPYK----------------------EFEYNGVRL 58 (185)
T ss_pred ceEEEEeCCCCC-cccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCCC----------------------CcccCCeEE
Confidence 489999998778 489999999999999999999999999875322111 122468888
Q ss_pred EEEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCcc-chHH
Q 010752 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT-SLIP 243 (502)
Q Consensus 165 ~~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t-~~~~ 243 (502)
+.++.|.. + .-....+.+ .++..++...... +.+.| |++.+..-+ +++.
T Consensus 59 ~~i~~~~~--------g------------~~~si~yd~--~sl~~al~~~~~~-------~~~~~-ii~ilg~~~g~~~~ 108 (185)
T PF09314_consen 59 VYIPAPKN--------G------------SAESIIYDF--LSLLHALRFIKQD-------KIKYD-IILILGYGIGPFFL 108 (185)
T ss_pred EEeCCCCC--------C------------chHHHHHHH--HHHHHHHHHHhhc-------cccCC-EEEEEcCCccHHHH
Confidence 87765521 0 001122222 2333333211100 12478 788886653 3444
Q ss_pred HHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHH-HHHHHhcCcccc
Q 010752 244 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWM-KAGILESDMVLT 322 (502)
Q Consensus 244 ~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~-k~~~~~ad~vi~ 322 (502)
.+++.... .+.|++.++|++++... .| ..+ ..+.+.+. +.+.+.||.+|+
T Consensus 109 ~~~r~~~~-----~g~~v~vN~DGlEWkR~-------------KW----------~~~-~k~~lk~~E~~avk~ad~lIa 159 (185)
T PF09314_consen 109 PFLRKLRK-----KGGKVVVNMDGLEWKRA-------------KW----------GRP-AKKYLKFSEKLAVKYADRLIA 159 (185)
T ss_pred HHHHhhhh-----cCCcEEECCCcchhhhh-------------hc----------CHH-HHHHHHHHHHHHHHhCCEEEE
Confidence 44443211 36799999998875220 00 000 00222232 556789999999
Q ss_pred CCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCc
Q 010752 323 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMD 358 (502)
Q Consensus 323 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd 358 (502)
.|+..++.+.+ +|+ ..+.++|++|.|
T Consensus 160 Ds~~I~~y~~~--~y~--------~~~s~~IaYGad 185 (185)
T PF09314_consen 160 DSKGIQDYIKE--RYG--------RKKSTFIAYGAD 185 (185)
T ss_pred cCHHHHHHHHH--HcC--------CCCcEEecCCCC
Confidence 99999999985 454 126789999976
No 105
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=98.80 E-value=2.2e-07 Score=98.11 Aligned_cols=222 Identities=19% Similarity=0.237 Sum_probs=148.3
Q ss_pred CCEEEEEcCCccchHHHHHHHhccCCCCcCCCeEEEEEecCcccccccccc-ccccCCCcccccccccccCCCCCcccch
Q 010752 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (502)
Q Consensus 228 pDvVih~h~~~t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~-~~~l~lp~~~~~~~~~~~~~~~~~~~~~ 306 (502)
-| +|..||+|..++|.+++.+. .+.++.|.+|.. ||.+. |..+. .
T Consensus 148 gD-iIWVhDYhL~L~P~mlR~~~------~~~~IgfFlHiP-----fPssEvfr~lP----------------------~ 193 (486)
T COG0380 148 GD-IIWVHDYHLLLVPQMLRERI------PDAKIGFFLHIP-----FPSSEVFRCLP----------------------W 193 (486)
T ss_pred CC-EEEEEechhhhhHHHHHHhC------CCceEEEEEeCC-----CCCHHHHhhCc----------------------h
Confidence 36 99999999999999999876 788999999943 22211 11111 1
Q ss_pred HHHHHHHHHhcCccccCCHHHHHHHHcCC--CCC------Ccchh-hhccccEEEeeCCCcCCCCCCCcccccccccCcc
Q 010752 307 INWMKAGILESDMVLTVSPHYAQELVSGE--DKG------VELDN-IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAS 377 (502)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~--~~g------~~~~~-~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~ 377 (502)
..-+-.++..||.|-+.++.+++.+.+.- ..+ +..+. --+..++..+|-|+|+..|.-....
T Consensus 194 r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~--------- 264 (486)
T COG0380 194 REEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKS--------- 264 (486)
T ss_pred HHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcC---------
Confidence 12234567889999999999999776421 111 11110 0011356778999998877432210
Q ss_pred hhccchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc------CCeEEEEEeCCC----hh---h
Q 010752 378 TVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----KP---M 444 (502)
Q Consensus 378 ~~~~~k~~~k~~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~------~~v~lvivG~g~----~~---~ 444 (502)
..-.....+++++++- +..+|+-+.|+.+-||+..-+.|+.+|.+ .++.++-++... +. +
T Consensus 265 ---~~v~~~~~el~~~~~~----~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~ 337 (486)
T COG0380 265 ---PSVQEKVLELKAELGR----NKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQAL 337 (486)
T ss_pred ---CchhhHHHHHHHHhcC----CceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCccccHHHHHH
Confidence 0001223556666542 36799999999999999999999999986 268888777643 22 4
Q ss_pred HHHHHHHHHH----CCC----ceEEEe-ecChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHc
Q 010752 445 EKQLEQLEIL----YPE----KARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRY 499 (502)
Q Consensus 445 ~~~l~~l~~~----~~~----~v~~~~-~~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~ 499 (502)
+.+++++..+ ++. -+.+.- ..+.++.-+++..||+++++|..|+..++..|.-+|
T Consensus 338 ~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~ 401 (486)
T COG0380 338 RLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAA 401 (486)
T ss_pred HHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHh
Confidence 4455555554 221 122222 245677779999999999999999999999998876
No 106
>PRK14986 glycogen phosphorylase; Provisional
Probab=98.69 E-value=1.4e-06 Score=96.99 Aligned_cols=268 Identities=19% Similarity=0.213 Sum_probs=166.1
Q ss_pred CCEEEEEcCCccchHHHHHHHhcc-CCCC-------cCCCeEEEEEecCcccc--ccccccccccCCCcc----------
Q 010752 228 EDVVFVANDWHTSLIPCYLKTMYK-PKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPAQ---------- 287 (502)
Q Consensus 228 pDvVih~h~~~t~~~~~~lk~~~~-~~~~-------~~~~pvv~tiH~~~~~g--~~~~~~~~~l~lp~~---------- 287 (502)
..++||.||-|.+++..-+-+.+. .+|+ ..+.-++||.|.....+ .|+...+..+ +|+.
T Consensus 313 ~~v~ihlNDtHpa~~i~ElmR~L~d~~gl~~~eA~~iv~~~~~fTnHT~lpealE~w~~~l~~~~-lpr~l~Ii~eIn~~ 391 (815)
T PRK14986 313 DKIAIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKI-LPRHLQIIFEINDY 391 (815)
T ss_pred cccEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhEEeecccCChHHhCcCCHHHHHHH-ccHhhhHHHHHHHH
Confidence 355999999998776544443332 2232 23567899999875444 3554444222 1111
Q ss_pred ccccc--------ccccC--CCCCcccchHHHHHHHHHhcCccccCCHHHHHHHHcCC---CCCCcchhhhccccEEEee
Q 010752 288 FKSSF--------DFIDG--YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE---DKGVELDNIIRKTGIKGIV 354 (502)
Q Consensus 288 ~~~~~--------~~~~~--~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~---~~g~~~~~~~~~~~i~vI~ 354 (502)
+.... +.+.. ...+-.+..++|-.-++..|..|-.||+.+.+.+.+.. ++..-+ .++.-+.
T Consensus 392 fl~~~~~~~~~~~~~~~~~sii~~~~~~~v~Ma~LAl~~S~~vNGVS~lH~evl~~~~f~df~~l~P------~kf~niT 465 (815)
T PRK14986 392 FLKTLQEQYPNDTDLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIFP------GRFCNVT 465 (815)
T ss_pred HHHHHHHhCCCcHHHHhhhhccccCCCCEEeeHHHHhhccchhhHHHHHHHHHHHHHHHHHHHhhCC------CcccccC
Confidence 11000 00000 00000012345555567788889999988877654311 111222 2566799
Q ss_pred CCCcCCCCC----CCc----ccccccc-------------c-Cc----chhccchHHHHHHH----HHHhCCCCCCCCcE
Q 010752 355 NGMDVQEWN----PLT----DKYIGVK-------------Y-DA----STVMDAKPLLKEAL----QAEVGLPVDRNIPV 404 (502)
Q Consensus 355 NGvd~~~~~----p~~----~~~i~~~-------------~-~~----~~~~~~k~~~k~~l----~~~~gl~~~~~~p~ 404 (502)
|||....|- |.- +.+|... + +. ..+.+.|..+|+.| +++.|...|++...
T Consensus 466 NGV~~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~d~~f~~~l~~vk~~nK~~L~~~i~~~~g~~ldp~sLf 545 (815)
T PRK14986 466 NGVTPRRWLALANPSLSAVLDEHIGRTWRTDLSQLSELKQHCDYPMVNHAVRQAKLENKKRLAEYIAQQLNVVVNPKALF 545 (815)
T ss_pred CCCChhhHhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCcccce
Confidence 999998885 422 1122111 1 11 12344555555555 45779999999999
Q ss_pred EEEEcCcccccCHHH-HHHHHhh---ccc-C-----CeEEEEEeCCChh------hHHHHHHHHH------HCCC--ceE
Q 010752 405 IGFIGRLEEQKGSDI-LAAAIPH---FIK-E-----NVQIIVLGTGKKP------MEKQLEQLEI------LYPE--KAR 460 (502)
Q Consensus 405 i~~iGrl~~~KG~d~-ll~Al~~---L~~-~-----~v~lvivG~g~~~------~~~~l~~l~~------~~~~--~v~ 460 (502)
++++-|+.+.|...+ ++..+.. +++ + .+++++.|...+. .-+.+.++.. ...+ +|.
T Consensus 546 d~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v~~~lkVV 625 (815)
T PRK14986 546 DVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVV 625 (815)
T ss_pred eeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhhcCceeEE
Confidence 999999999999999 6666544 433 2 5889999976542 2233444444 2334 788
Q ss_pred EEeecChHHHHHHHHhcCEEEEcCCC--CCCcHHHHHHHHcCCC
Q 010752 461 GVAKFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTV 502 (502)
Q Consensus 461 ~~~~~~~~~~~~ila~ADi~l~PS~~--E~fglv~lEAma~G~P 502 (502)
|+..++...+..++.+||+.+..|+- |.+|..-+-||..|.+
T Consensus 626 FlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaL 669 (815)
T PRK14986 626 FIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGAL 669 (815)
T ss_pred EeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCce
Confidence 89999999999999999999999984 9999999999998874
No 107
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.69 E-value=4.7e-06 Score=83.07 Aligned_cols=235 Identities=17% Similarity=0.220 Sum_probs=140.9
Q ss_pred CCCEEEEEcCCcc--chHHHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCccc
Q 010752 227 GEDVVFVANDWHT--SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRG 304 (502)
Q Consensus 227 ~pDvVih~h~~~t--~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~ 304 (502)
.+| +|...+..+ .++.|++.... .+.+.++.-||..|. . .+.+.....+ |..
T Consensus 103 ~~~-~ilvQNPP~iPtliv~~~~~~l------~~~KfiIDWHNy~Ys-l-------~l~~~~g~~h----------~lV- 156 (444)
T KOG2941|consen 103 PPD-IILVQNPPSIPTLIVCVLYSIL------TGAKFIIDWHNYGYS-L-------QLKLKLGFQH----------PLV- 156 (444)
T ss_pred CCc-EEEEeCCCCCchHHHHHHHHHH------hcceEEEEehhhHHH-H-------HHHhhcCCCC----------chH-
Confidence 589 777777665 44555555444 799999999998872 0 1111111111 111
Q ss_pred chHHHH-HHHHHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCC-----CcCCC----CCCCccccccccc
Q 010752 305 RKINWM-KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-----MDVQE----WNPLTDKYIGVKY 374 (502)
Q Consensus 305 ~~~~~~-k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NG-----vd~~~----~~p~~~~~i~~~~ 374 (502)
+...|+ +..-+.||.-+||++.+++++.+ ..|+.. ..+++.- .+++. |.+....+- .|
T Consensus 157 ~l~~~~E~~fgk~a~~nLcVT~AMr~dL~q--nWgi~r--------a~v~YDrPps~~~~l~~~H~lf~~l~~d~~--~f 224 (444)
T KOG2941|consen 157 RLVRWLEKYFGKLADYNLCVTKAMREDLIQ--NWGINR--------AKVLYDRPPSKPTPLDEQHELFMKLAGDHS--PF 224 (444)
T ss_pred HHHHHHHHHhhcccccchhhHHHHHHHHHH--hcCCce--------eEEEecCCCCCCCchhHHHHHHhhhccccc--hh
Confidence 344555 44456799999999999999986 466542 3444321 11111 222111111 01
Q ss_pred CcchhccchHHHHHHHHHHhC---CCCCCCCc-EEEEEcCcccccCHHHHHHHHhhccc---------CCeEEEEEeCCC
Q 010752 375 DASTVMDAKPLLKEALQAEVG---LPVDRNIP-VIGFIGRLEEQKGSDILAAAIPHFIK---------ENVQIIVLGTGK 441 (502)
Q Consensus 375 ~~~~~~~~k~~~k~~l~~~~g---l~~~~~~p-~i~~iGrl~~~KG~d~ll~Al~~L~~---------~~v~lvivG~g~ 441 (502)
. ....+.|+..+.++-++.. ....++.| +++..-...|...+.+|++|+...-+ |.+-.+|-|.|+
T Consensus 225 ~-ar~~q~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGP 303 (444)
T KOG2941|consen 225 R-AREPQDKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGP 303 (444)
T ss_pred h-hcccccchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCc
Confidence 1 1134566666666666554 11223444 56677778899999999999984322 456667777776
Q ss_pred hhhHHHHHHHHHHCC-CceEEE-eecChHHHHHHHHhcCEEE--EcCCC-CCCcHHHHHHHHcCCC
Q 010752 442 KPMEKQLEQLEILYP-EKARGV-AKFNIPLAHMIIAGADFIL--IPSRF-EPCGLIQLHAMRYGTV 502 (502)
Q Consensus 442 ~~~~~~l~~l~~~~~-~~v~~~-~~~~~~~~~~ila~ADi~l--~PS~~-E~fglv~lEAma~G~P 502 (502)
+.+...+.+.+++ .++.+. .+...++.+.+++.||+.| ++|.. =-.++.++.-.-||+|
T Consensus 304 --lkE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglP 367 (444)
T KOG2941|consen 304 --LKEKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLP 367 (444)
T ss_pred --hhHHHHHHHHHhcccceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCc
Confidence 5555555555544 455544 4456688889999999765 55655 4578888888888887
No 108
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.62 E-value=6.1e-07 Score=79.47 Aligned_cols=109 Identities=22% Similarity=0.333 Sum_probs=67.3
Q ss_pred eEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCceEE
Q 010752 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (502)
Q Consensus 86 kIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 165 (502)
|||+|+.... .++..++.+|.++||+|+++++..+. .. .....|+.++
T Consensus 1 KIl~i~~~~~---------~~~~~~~~~L~~~g~~V~ii~~~~~~-~~----------------------~~~~~~i~~~ 48 (139)
T PF13477_consen 1 KILLIGNTPS---------TFIYNLAKELKKRGYDVHIITPRNDY-EK----------------------YEIIEGIKVI 48 (139)
T ss_pred CEEEEecCcH---------HHHHHHHHHHHHCCCEEEEEEcCCCc-hh----------------------hhHhCCeEEE
Confidence 6899997542 36889999999999999999985432 11 0113466666
Q ss_pred EEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCcc-chHHH
Q 010752 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT-SLIPC 244 (502)
Q Consensus 166 ~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t-~~~~~ 244 (502)
.++.+ . + . ... .+ . +.++.+.+.. .+|| |||+|...+ ++.+.
T Consensus 49 ~~~~~--~-k-----------------~---~~~--~~-~-~~~l~k~ik~---------~~~D-vIh~h~~~~~~~~~~ 91 (139)
T PF13477_consen 49 RLPSP--R-K-----------------S---PLN--YI-K-YFRLRKIIKK---------EKPD-VIHCHTPSPYGLFAM 91 (139)
T ss_pred EecCC--C-C-----------------c---cHH--HH-H-HHHHHHHhcc---------CCCC-EEEEecCChHHHHHH
Confidence 55322 0 0 0 011 11 1 1233333332 2799 999998776 56666
Q ss_pred HHHHhccCCCCcCCCeEEEEEecCc
Q 010752 245 YLKTMYKPKGMYKSAKVVFCIHNIA 269 (502)
Q Consensus 245 ~lk~~~~~~~~~~~~pvv~tiH~~~ 269 (502)
+++... .++|++++.|+.+
T Consensus 92 l~~~~~------~~~~~i~~~hg~~ 110 (139)
T PF13477_consen 92 LAKKLL------KNKKVIYTVHGSD 110 (139)
T ss_pred HHHHHc------CCCCEEEEecCCe
Confidence 666543 3489999999754
No 109
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.60 E-value=4.2e-06 Score=93.26 Aligned_cols=264 Identities=19% Similarity=0.222 Sum_probs=167.6
Q ss_pred CCCEEEEEcCCccchHHHHHHHhcc-CCCC-------cCCCeEEEEEecCcccc--ccccccccccCCCcccc-------
Q 010752 227 GEDVVFVANDWHTSLIPCYLKTMYK-PKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPAQFK------- 289 (502)
Q Consensus 227 ~pDvVih~h~~~t~~~~~~lk~~~~-~~~~-------~~~~pvv~tiH~~~~~g--~~~~~~~~~l~lp~~~~------- 289 (502)
.+. +||.||-|.+++..-+-+.+. .+|+ ....-++||.|.....+ .|+...+..+ +|+.+.
T Consensus 300 ~~~-~ihlNDtHpalai~ElmR~L~d~~gl~w~~Aw~i~~~~~~yTnHT~lpealE~wp~~l~~~~-lpr~~~II~~In~ 377 (797)
T cd04300 300 DKV-AIQLNDTHPALAIPELMRILVDEEGLDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFERL-LPRHLEIIYEINR 377 (797)
T ss_pred Cce-EEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhheeeecCCCchHHhCccCHHHHHHH-ChHHHHHHHHHHH
Confidence 355 999999998776544443332 2332 23457899999875433 3444443222 122110
Q ss_pred -----------------cccccccCCCCCcccchHHHHHHHHHhcCccccCCHHHHHHHHcCC---CCCCcchhhhcccc
Q 010752 290 -----------------SSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE---DKGVELDNIIRKTG 349 (502)
Q Consensus 290 -----------------~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~---~~g~~~~~~~~~~~ 349 (502)
..+..++.- ..+.++|-.-++..|..|-.||+-+.+.+.+.. ++..=| .+
T Consensus 378 ~~~~~~~~~~~~~~~~~~~l~ii~~~----~~~~v~Ma~LAi~~S~~vNGVS~lH~ei~k~~~~~df~~l~P------~k 447 (797)
T cd04300 378 RFLEEVRAKYPGDEDRIRRMSIIEEG----GEKQVRMAHLAIVGSHSVNGVAALHSELLKETVFKDFYELYP------EK 447 (797)
T ss_pred HHHHHHHHhcCCCHHHHHhhcccccC----CCCEEehHHHHHhcCcchhhhHHHHHHHHHHhhHHHHHhhCC------Cc
Confidence 011111110 012355555667789999999998887766421 111112 36
Q ss_pred EEEeeCCCcCCCCC----CCc----ccccccc-------------c--Cc---chhccchHHHHHHH----HHHhCCCCC
Q 010752 350 IKGIVNGMDVQEWN----PLT----DKYIGVK-------------Y--DA---STVMDAKPLLKEAL----QAEVGLPVD 399 (502)
Q Consensus 350 i~vI~NGvd~~~~~----p~~----~~~i~~~-------------~--~~---~~~~~~k~~~k~~l----~~~~gl~~~ 399 (502)
+.-+.|||....|- |.- +.+|... | |+ ..+.+.|..+|+.| ++..|..+|
T Consensus 448 f~n~TNGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~l~~~K~~nK~~L~~~i~~~~g~~ld 527 (797)
T cd04300 448 FNNKTNGITPRRWLLQANPGLSALITETIGDDWVTDLDQLKKLEPFADDPAFLKEFRAIKQANKERLAAYIKKTTGVEVD 527 (797)
T ss_pred cCCcCCCCCcchhhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 77899999998885 221 1122111 1 11 23445555666555 558899999
Q ss_pred CCCcEEEEEcCcccccCHHH-HHHHHhh---ccc-C-----CeEEEEEeCCChh------hHHHHHHHHHH------CCC
Q 010752 400 RNIPVIGFIGRLEEQKGSDI-LAAAIPH---FIK-E-----NVQIIVLGTGKKP------MEKQLEQLEIL------YPE 457 (502)
Q Consensus 400 ~~~p~i~~iGrl~~~KG~d~-ll~Al~~---L~~-~-----~v~lvivG~g~~~------~~~~l~~l~~~------~~~ 457 (502)
++...++++-|+.+.|.+.+ ++..+.. +++ + ..++++.|...|. .-+.+.++++. ..+
T Consensus 528 p~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~ 607 (797)
T cd04300 528 PDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDVGD 607 (797)
T ss_pred CCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhcCC
Confidence 99999999999999999999 6666444 433 2 4788888876542 22334444432 223
Q ss_pred --ceEEEeecChHHHHHHHHhcCEEEEcCCC--CCCcHHHHHHHHcCCC
Q 010752 458 --KARGVAKFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTV 502 (502)
Q Consensus 458 --~v~~~~~~~~~~~~~ila~ADi~l~PS~~--E~fglv~lEAma~G~P 502 (502)
+|.|+..++...+..++.+||+....|+- |.+|..-+-+|..|.+
T Consensus 608 ~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGal 656 (797)
T cd04300 608 KLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGAL 656 (797)
T ss_pred ceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCce
Confidence 68888899999999999999999999984 9999999999998864
No 110
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=98.53 E-value=3.7e-08 Score=100.23 Aligned_cols=170 Identities=16% Similarity=0.204 Sum_probs=97.1
Q ss_pred CCEEEEEcCCccchHHHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchH
Q 010752 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 307 (502)
Q Consensus 228 pDvVih~h~~~t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~ 307 (502)
+-||-|.|+|.+|...++.+.+. -.+-+|||.|..........+.++..+.-+.| +.-...-+-..+..+
T Consensus 174 ~~vVahFHEW~AGVgL~l~R~rr------l~iaTifTTHATLLGRyLCA~~~DfYNnLd~f----~vD~EAGkr~IYHrY 243 (692)
T KOG3742|consen 174 TAVVAHFHEWQAGVGLILCRARR------LDIATIFTTHATLLGRYLCAGNVDFYNNLDSF----DVDKEAGKRQIYHRY 243 (692)
T ss_pred hHHHHHHHHHHhccchheehhcc------cceEEEeehhHHHHHHHHhcccchhhhchhhc----ccchhhccchhHHHH
Confidence 45688999999987766666544 57889999998764222333333333222221 110000000011223
Q ss_pred HHHHHHHHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHH
Q 010752 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (502)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k 387 (502)
=+.+++...|+...|||+-++-+... .+++++=.+.|||+++..|..... | +-+ -+..|
T Consensus 244 C~ERaa~h~AhVFTTVSeITa~EAeH----------lLkRKPD~itPNGLNV~KFsA~HE------F--QNL---HA~~K 302 (692)
T KOG3742|consen 244 CLERAAAHTAHVFTTVSEITALEAEH----------LLKRKPDVITPNGLNVKKFSAVHE------F--QNL---HAQKK 302 (692)
T ss_pred HHHHHhhhhhhhhhhHHHHHHHHHHH----------HHhcCCCeeCCCCcceeehhHHHH------H--HHH---HHHHH
Confidence 34477777899999999988765542 233334467899999987754210 0 011 12223
Q ss_pred HHHHHH-----hCC-CCCC-CCcEEEEEcCcc-cccCHHHHHHHHhhcc
Q 010752 388 EALQAE-----VGL-PVDR-NIPVIGFIGRLE-EQKGSDILAAAIPHFI 428 (502)
Q Consensus 388 ~~l~~~-----~gl-~~~~-~~p~i~~iGrl~-~~KG~d~ll~Al~~L~ 428 (502)
+.++.. +|. .-|- +.-++...||++ ..||.|.+||++++|.
T Consensus 303 ekIndFVRGHF~GhlDFdLdkTlyfFiAGRYEf~NKGaDmFiEsLaRLN 351 (692)
T KOG3742|consen 303 EKINDFVRGHFHGHLDFDLDKTLYFFIAGRYEFSNKGADMFIESLARLN 351 (692)
T ss_pred HHHHHHhhhhccccccccccceEEEEEeeeeeeccCchHHHHHHHHHhH
Confidence 333331 121 1222 333566669999 5999999999999974
No 111
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=98.50 E-value=4.6e-05 Score=78.78 Aligned_cols=272 Identities=15% Similarity=0.109 Sum_probs=141.6
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCe-EEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecCce
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHR-VMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~-V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (502)
|+|++... .+||-=.....++++|.++|++ |.++.... ..+ .+.....|+.
T Consensus 1 ~~ivl~~g------GTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~--~~e--------------------~~l~~~~~~~ 52 (357)
T COG0707 1 KKIVLTAG------GTGGHVFPALALAEELAKRGWEQVIVLGTGD--GLE--------------------AFLVKQYGIE 52 (357)
T ss_pred CeEEEEeC------CCccchhHHHHHHHHHHhhCccEEEEecccc--cce--------------------eeeccccCce
Confidence 45555553 4677666667799999999996 55542211 111 0111123677
Q ss_pred EEEEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccchHH
Q 010752 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 243 (502)
Q Consensus 164 v~~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~~~ 243 (502)
.+.++...+..+ . ...+......+++.+.++.+.+. +++||+|+-++.+.+.+..
T Consensus 53 ~~~I~~~~~~~~----------~------~~~~~~~~~~~~~~~~~a~~il~---------~~kPd~vig~Ggyvs~P~~ 107 (357)
T COG0707 53 FELIPSGGLRRK----------G------SLKLLKAPFKLLKGVLQARKILK---------KLKPDVVIGTGGYVSGPVG 107 (357)
T ss_pred EEEEeccccccc----------C------cHHHHHHHHHHHHHHHHHHHHHH---------HcCCCEEEecCCccccHHH
Confidence 777765443221 0 11133333445566666555554 2489965555655555443
Q ss_pred HHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccccC
Q 010752 244 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323 (502)
Q Consensus 244 ~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 323 (502)
++... .++|++....|... | ....++ ...++.|.+.
T Consensus 108 -~Aa~~-------~~iPv~ihEqn~~~-G--------------------------------~ank~~---~~~a~~V~~~ 143 (357)
T COG0707 108 -IAAKL-------LGIPVIIHEQNAVP-G--------------------------------LANKIL---SKFAKKVASA 143 (357)
T ss_pred -HHHHh-------CCCCEEEEecCCCc-c--------------------------------hhHHHh---HHhhceeeec
Confidence 33332 57888877654431 1 112222 3457766654
Q ss_pred CHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCc
Q 010752 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (502)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p 403 (502)
-+. .. ....+.++.++-|.+..+... .. ..+.+.... .+.+
T Consensus 144 f~~----~~----------~~~~~~~~~~tG~Pvr~~~~~-~~--------------------~~~~~~~~~----~~~~ 184 (357)
T COG0707 144 FPK----LE----------AGVKPENVVVTGIPVRPEFEE-LP--------------------AAEVRKDGR----LDKK 184 (357)
T ss_pred ccc----cc----------ccCCCCceEEecCcccHHhhc-cc--------------------hhhhhhhcc----CCCc
Confidence 333 11 111122566777766654443 11 011112211 1566
Q ss_pred EEEEEcC-cccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCEEEE
Q 010752 404 VIGFIGR-LEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (502)
Q Consensus 404 ~i~~iGr-l~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi~l~ 482 (502)
+|+.+|- ..-++=-+.+.++++++.+ +++++...... . .+.+++.-.+++. ..+..|.. .+..+|+.||+++-
T Consensus 185 ~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~-~-~~~~~~~~~~~~~--~~v~~f~~-dm~~~~~~ADLvIs 258 (357)
T COG0707 185 TILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKN-D-LEELKSAYNELGV--VRVLPFID-DMAALLAAADLVIS 258 (357)
T ss_pred EEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcc-h-HHHHHHHHhhcCc--EEEeeHHh-hHHHHHHhccEEEe
Confidence 7777754 4444433444444445533 67777655333 1 2223333233332 33334433 37789999999994
Q ss_pred cCCCCCCcHHHHHHHHcCCC
Q 010752 483 PSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 483 PS~~E~fglv~lEAma~G~P 502 (502)
= +-++++-|..++|+|
T Consensus 259 R----aGa~Ti~E~~a~g~P 274 (357)
T COG0707 259 R----AGALTIAELLALGVP 274 (357)
T ss_pred C----CcccHHHHHHHhCCC
Confidence 3 457999999999998
No 112
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.48 E-value=2.9e-05 Score=77.81 Aligned_cols=91 Identities=16% Similarity=0.179 Sum_probs=66.4
Q ss_pred CcEEEEEcCcccccCHHHHHHHHhhcccCCeEE-EEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCEE
Q 010752 402 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQI-IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (502)
Q Consensus 402 ~p~i~~iGrl~~~KG~d~ll~Al~~L~~~~v~l-vivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi~ 480 (502)
..++++.|...+.+....+++++.++. .++++ +++|.+.+ ..+.++++.+..+ ++... -..+.+.++|+.||++
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~-~~~~i~vv~G~~~~-~~~~l~~~~~~~~-~i~~~--~~~~~m~~lm~~aDl~ 245 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ-INISITLVTGSSNP-NLDELKKFAKEYP-NIILF--IDVENMAELMNEADLA 245 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc-cCceEEEEECCCCc-CHHHHHHHHHhCC-CEEEE--eCHHHHHHHHHHCCEE
Confidence 347889998888887888999998763 33333 36787754 3455666665544 45533 2345688999999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCC
Q 010752 481 LIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 481 l~PS~~E~fglv~lEAma~G~P 502 (502)
+.+ .|.++.|++++|+|
T Consensus 246 Is~-----~G~T~~E~~a~g~P 262 (279)
T TIGR03590 246 IGA-----AGSTSWERCCLGLP 262 (279)
T ss_pred EEC-----CchHHHHHHHcCCC
Confidence 984 67999999999998
No 113
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=98.43 E-value=1.3e-05 Score=89.06 Aligned_cols=268 Identities=16% Similarity=0.185 Sum_probs=164.7
Q ss_pred CCCEEEEEcCCccchHHHHHHHhccC-CCC-------cCCCeEEEEEecCcccc--ccccccccccCCCcccc------c
Q 010752 227 GEDVVFVANDWHTSLIPCYLKTMYKP-KGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPAQFK------S 290 (502)
Q Consensus 227 ~pDvVih~h~~~t~~~~~~lk~~~~~-~~~-------~~~~pvv~tiH~~~~~g--~~~~~~~~~l~lp~~~~------~ 290 (502)
.+. +||+||-|.+++..-+-+.+.+ +|+ ..+.-++||.|.....+ .|+...+..+ +|+.+. .
T Consensus 302 ~~~-~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~w~~~l~~~~-Lpr~~~ii~~in~ 379 (798)
T PRK14985 302 DYE-VIQLNDTHPTIAIPELLRVLLDEHQLSWDDAWAITSKTFAYTNHTLMPEALECWDEKLVKSL-LPRHMQIIKEINT 379 (798)
T ss_pred CCc-EEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHheeeecCCCChhhhCCCCHHHHHHH-hHHHHHHHHHHHH
Confidence 355 9999999987765444443332 232 23557899999875444 3444443222 122110 0
Q ss_pred ccc--cccCCCC---------CcccchHHHHHHHHHhcCccccCCHHHHHHHHcCCC---CCCcchhhhccccEEEeeCC
Q 010752 291 SFD--FIDGYNK---------PVRGRKINWMKAGILESDMVLTVSPHYAQELVSGED---KGVELDNIIRKTGIKGIVNG 356 (502)
Q Consensus 291 ~~~--~~~~~~~---------~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~---~g~~~~~~~~~~~i~vI~NG 356 (502)
.|. ....+.. .+....++|-.-++..|..|-.||+-+.+.+.+..+ +.+- +.++.-+.||
T Consensus 380 ~fl~~~~~~~~~d~~~~~~~sii~~~~v~Ma~LAi~~S~~vNGVS~lH~eil~~~~f~df~~l~------p~kf~nvTNG 453 (798)
T PRK14985 380 RFKTLVEKTWPGDKKVWAKLAVVHDKQVRMANLCVVSGFAVNGVAALHSDLVVKDLFPEYHQLW------PNKFHNVTNG 453 (798)
T ss_pred HHHHHHHHhCCCcHHHhhhhhhccCCeeehHHHHHHhcchhHhhHHHHhchhHHhhhhhhHhhC------CCccCCcCCC
Confidence 000 0000000 001113444455566788888888877765554211 1111 2367889999
Q ss_pred CcCCCCC----CCc----cccccc-------------ccCc-ch----hccchHHHHHHH----HHHhCCCCCCCCcEEE
Q 010752 357 MDVQEWN----PLT----DKYIGV-------------KYDA-ST----VMDAKPLLKEAL----QAEVGLPVDRNIPVIG 406 (502)
Q Consensus 357 vd~~~~~----p~~----~~~i~~-------------~~~~-~~----~~~~k~~~k~~l----~~~~gl~~~~~~p~i~ 406 (502)
|....|- |.- +.+|.- +|.. .. +.+.|..+|+.| +++.|...|++...++
T Consensus 454 Vt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~~~~vK~~nK~~L~~~i~~~~g~~ldp~slfdv 533 (798)
T PRK14985 454 ITPRRWIKQCNPALAALLDKTLKKEWANDLDQLINLEKYADDAAFRQQYREIKQANKVRLAEFVKQRTGIEINPQAIFDV 533 (798)
T ss_pred cCcchhhhhhCHHHHHHHHHhcCcchhhChHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCchhcchh
Confidence 9999994 422 222220 1211 22 234555555544 5788999999999999
Q ss_pred EEcCcccccCHHH-HHHHHhhccc----C-----CeEEEEEeCCChh------hHHHHHHHHHHC------CC--ceEEE
Q 010752 407 FIGRLEEQKGSDI-LAAAIPHFIK----E-----NVQIIVLGTGKKP------MEKQLEQLEILY------PE--KARGV 462 (502)
Q Consensus 407 ~iGrl~~~KG~d~-ll~Al~~L~~----~-----~v~lvivG~g~~~------~~~~l~~l~~~~------~~--~v~~~ 462 (502)
++-|+.+.|...+ ++..+..+.+ + ..++++.|...+. .-+.+.++++.. .+ +|.|+
T Consensus 534 q~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFl 613 (798)
T PRK14985 534 QIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVGDKLKVVFL 613 (798)
T ss_pred hHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChhhCCceeEEEe
Confidence 9999999999999 7666554432 2 4889999976542 222333333322 23 68888
Q ss_pred eecChHHHHHHHHhcCEEEEcCC--CCCCcHHHHHHHHcCCC
Q 010752 463 AKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 463 ~~~~~~~~~~ila~ADi~l~PS~--~E~fglv~lEAma~G~P 502 (502)
..++...+..++.+||+....|+ .|.+|..-+-+|..|++
T Consensus 614 enY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaL 655 (798)
T PRK14985 614 PDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGAL 655 (798)
T ss_pred CCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCce
Confidence 89999999999999999999998 49999999999998874
No 114
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=98.42 E-value=2.2e-06 Score=92.90 Aligned_cols=98 Identities=11% Similarity=0.009 Sum_probs=77.7
Q ss_pred cEEEEEc--CcccccCHHHHHHHHhhccc--CCeEEEEEeCCCh-hhHHHHHHHHHHCC---------------------
Q 010752 403 PVIGFIG--RLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK-PMEKQLEQLEILYP--------------------- 456 (502)
Q Consensus 403 p~i~~iG--rl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~-~~~~~l~~l~~~~~--------------------- 456 (502)
..+++++ |+ ++|-++.+|+|+.++.. ++++|.+.|.+.+ .+.+.++++.+++.
T Consensus 320 ~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (519)
T TIGR03713 320 ETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNNDNDITQLLEDILEQINEEYNQDKNFFSLSEQDENQPI 398 (519)
T ss_pred ceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCchhHHHHHHHHHHHHHhhhchhhhccccchhhhhhhc
Confidence 3677888 99 99999999999999855 7999999998863 34455555544331
Q ss_pred ----------CceEEEeecChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 457 ----------EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 457 ----------~~v~~~~~~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
+.+.+.+..++..+...+..+.++|.+|..|+|+ +++||++.|+|
T Consensus 399 ~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~GiP 453 (519)
T TIGR03713 399 LQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGIP 453 (519)
T ss_pred ccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCCC
Confidence 3445555445557779999999999999999999 99999999998
No 115
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=98.42 E-value=3.3e-06 Score=93.72 Aligned_cols=264 Identities=20% Similarity=0.247 Sum_probs=166.5
Q ss_pred CCEEEEEcCCccchHHHHHHHhcc-CCCC-------cCCCeEEEEEecCcccc--cccccccccc---------CCCccc
Q 010752 228 EDVVFVANDWHTSLIPCYLKTMYK-PKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLL---------NLPAQF 288 (502)
Q Consensus 228 pDvVih~h~~~t~~~~~~lk~~~~-~~~~-------~~~~pvv~tiH~~~~~g--~~~~~~~~~l---------~lp~~~ 288 (502)
+. +||.||-|.+++..-+-+.+. .+|+ ..+.-++||.|.....+ .|+...+..+ .+...+
T Consensus 298 ~~-~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~wp~~l~~~~Lpr~~~iI~~In~~f 376 (794)
T TIGR02093 298 KV-AIQLNDTHPALAIPELMRLLIDEEGMDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFQKLLPRHLEIIYEINRRF 376 (794)
T ss_pred ce-EEEecCCchHHHHHHHHHHHHHhcCCCHHHHHHHHHhheecccCCCChHHhCCcCHHHHHHHHhHHHHHHHHHhHHH
Confidence 45 899999998776554443332 2232 23457899999875433 3554444221 111111
Q ss_pred cc--------------ccccccCCCCCcccchHHHHHHHHHhcCccccCCHHHHHHHHcC---CCCCCcchhhhccccEE
Q 010752 289 KS--------------SFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSG---EDKGVELDNIIRKTGIK 351 (502)
Q Consensus 289 ~~--------------~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~---~~~g~~~~~~~~~~~i~ 351 (502)
.. .+..+.. -.++.++|-.-++..|..|-.||+-+.+.+.+. .++..=| .++.
T Consensus 377 l~~~~~~~p~d~~~~~~~sii~~----~~~~~v~Ma~LAi~~S~~vNGVS~lH~eilk~~~~~df~~l~P------~kf~ 446 (794)
T TIGR02093 377 LAELAAKGPGDEAKIRRMSIIEE----GQSKRVRMANLAIVGSHSVNGVAALHTELLKEDLLKDFYELYP------EKFN 446 (794)
T ss_pred HHHHHHhCCCcHHHHhheeeeec----CCCCEEehHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhCC------CccC
Confidence 11 0000000 001245555566778899999999888766631 1111212 3677
Q ss_pred EeeCCCcCCCCC----CCc----cccccc-------------cc-Cc----chhccchHHHHHHH----HHHhCCCCCCC
Q 010752 352 GIVNGMDVQEWN----PLT----DKYIGV-------------KY-DA----STVMDAKPLLKEAL----QAEVGLPVDRN 401 (502)
Q Consensus 352 vI~NGvd~~~~~----p~~----~~~i~~-------------~~-~~----~~~~~~k~~~k~~l----~~~~gl~~~~~ 401 (502)
-+.|||.+..|- |.- +++|.- +| +. ..+.+.|..+|++| +++.|...|++
T Consensus 447 n~TNGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~l~~vK~~nK~~L~~~i~~~~g~~ldp~ 526 (794)
T TIGR02093 447 NKTNGITPRRWLRLANPGLSALLTETIGDDWLTDLDLLKKLEPYADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPN 526 (794)
T ss_pred CcCCCCCccchhhhcCHHHHHHHHHhcCchhhhcHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCcc
Confidence 899999998885 221 122221 12 21 23445555555555 45889999999
Q ss_pred CcEEEEEcCcccccCHHH-HHHHHhh---ccc-C-----CeEEEEEeCCChh------hHHHHHHHHHH------CCC--
Q 010752 402 IPVIGFIGRLEEQKGSDI-LAAAIPH---FIK-E-----NVQIIVLGTGKKP------MEKQLEQLEIL------YPE-- 457 (502)
Q Consensus 402 ~p~i~~iGrl~~~KG~d~-ll~Al~~---L~~-~-----~v~lvivG~g~~~------~~~~l~~l~~~------~~~-- 457 (502)
...++++-|+.+.|...+ ++..+.. +++ + ..++++.|...|. .-+.+.++++. ..+
T Consensus 527 slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~l 606 (794)
T TIGR02093 527 SIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKL 606 (794)
T ss_pred ccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhhCCce
Confidence 999999999999999999 6666544 433 2 5688888876542 22233333322 223
Q ss_pred ceEEEeecChHHHHHHHHhcCEEEEcCCC--CCCcHHHHHHHHcCCC
Q 010752 458 KARGVAKFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTV 502 (502)
Q Consensus 458 ~v~~~~~~~~~~~~~ila~ADi~l~PS~~--E~fglv~lEAma~G~P 502 (502)
+|.|+..++...+..++.+||+....|+- |.+|..-+-+|..|.+
T Consensus 607 kVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGal 653 (794)
T TIGR02093 607 KVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGAL 653 (794)
T ss_pred eEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcc
Confidence 68888899999999999999999999984 9999999999998874
No 116
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=98.34 E-value=2.9e-06 Score=93.15 Aligned_cols=262 Identities=19% Similarity=0.250 Sum_probs=143.1
Q ss_pred EEEEEcCCccchHHHH-HHHhccCCCC-------cCCCeEEEEEecCcccc--ccccccccccCCCc----------ccc
Q 010752 230 VVFVANDWHTSLIPCY-LKTMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPA----------QFK 289 (502)
Q Consensus 230 vVih~h~~~t~~~~~~-lk~~~~~~~~-------~~~~pvv~tiH~~~~~g--~~~~~~~~~l~lp~----------~~~ 289 (502)
++||+||-|.+++..- ++.....+|+ ..+.-++||.|.....+ .|+.+++..+ ||+ .|.
T Consensus 216 ~~ihlNdtHpa~ai~ElmR~L~de~gl~~~eA~eiv~~~~~fTnHT~vpealE~wp~~l~~~~-Lpr~~~ii~ein~~f~ 294 (713)
T PF00343_consen 216 VVIHLNDTHPAFAIPELMRILMDEEGLSWDEAWEIVRKTFAFTNHTPVPEALEKWPVDLFERY-LPRHLEIIYEINRRFL 294 (713)
T ss_dssp EEEEEESSTTTTHHHHHHHHHHHTT---HHHHHHHHHHHEEEEE--SSGGGS-EEEHHHHHHH-SHHHHHHHHHHHHHHH
T ss_pred eEEeecCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHhceeeeccccccccccccCHHHHHHH-ChHHHHHHHHHhHHHH
Confidence 4999999998776444 4443333443 12457899999875544 3554444221 111 110
Q ss_pred --------------cccccccCCCCCcccchHHHHHHHHHhcCccccCCHHHHHHHHcCC---CCCCcchhhhccccEEE
Q 010752 290 --------------SSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE---DKGVELDNIIRKTGIKG 352 (502)
Q Consensus 290 --------------~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~---~~g~~~~~~~~~~~i~v 352 (502)
..+..++. -..+.++|-.-++..|..|-.||+-+.+.+.+.. ++.+.+ .++.-
T Consensus 295 ~~~~~~~~~d~~~~~~l~ii~~----~~~~~~~Ma~LAl~~S~~vNGVS~LH~ev~k~~~f~~f~~l~P------~kf~n 364 (713)
T PF00343_consen 295 DELRRKYPGDEDQIRRLSIIEE----GNSKRFRMANLALRGSHSVNGVSKLHGEVLKQMVFKDFYELWP------EKFGN 364 (713)
T ss_dssp HHHHHHSTT-HHHHHHHSSEET----SSSCEEEHHHHHHHCESEEEESSHHHHHHHHHTTTHHHHHHSG------GGEEE
T ss_pred HHHHHHhcCcchhhhhcccccc----cchhhcchhHHHHHhcccccchHHHHHHHHHHHHhhhhhhcCC------ceeec
Confidence 00111100 0112455555678889999999999888766421 112222 37899
Q ss_pred eeCCCcCCCCCCCc--------cccccccc--Ccc----------------hhccchHH----HHHHHHHHhCCCCCCCC
Q 010752 353 IVNGMDVQEWNPLT--------DKYIGVKY--DAS----------------TVMDAKPL----LKEALQAEVGLPVDRNI 402 (502)
Q Consensus 353 I~NGvd~~~~~p~~--------~~~i~~~~--~~~----------------~~~~~k~~----~k~~l~~~~gl~~~~~~ 402 (502)
|.|||.+..|--.. +++|.-.+ +.. .+...|.. +.+.++++.|...+++.
T Consensus 365 vTNGVh~rrWl~~~nP~L~~L~~~~iG~~W~~d~~~l~~l~~~~dd~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~s 444 (713)
T PF00343_consen 365 VTNGVHPRRWLSQANPELSELITEYIGDDWRTDLEQLEKLEKFADDEEFQEELREVKQENKERLAEYIKKRTGVELDPDS 444 (713)
T ss_dssp ----B-TCCCCCCTSHHHHHHHHHHHTSGGGCSGGGGGGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTS
T ss_pred cccCccCcccccccCHHHHHHHHHHhccccccCHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcch
Confidence 99999999994221 12222111 111 11123333 34455668898889999
Q ss_pred cEEEEEcCcccccCHHH-HH---HHHhhccc------CCeEEEEEeCCChhh--HHH----HHHHHHH------CCC--c
Q 010752 403 PVIGFIGRLEEQKGSDI-LA---AAIPHFIK------ENVQIIVLGTGKKPM--EKQ----LEQLEIL------YPE--K 458 (502)
Q Consensus 403 p~i~~iGrl~~~KG~d~-ll---~Al~~L~~------~~v~lvivG~g~~~~--~~~----l~~l~~~------~~~--~ 458 (502)
..++++-|+.+.|...+ ++ +-+.+|++ ..+++|+.|...|.+ -+. +.++++. ..+ +
T Consensus 445 lfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~~lk 524 (713)
T PF00343_consen 445 LFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDYMGKEIIKLINNVAEVINNDPEVGDRLK 524 (713)
T ss_dssp EEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEE
T ss_pred hhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHHhcChhhcccee
Confidence 99999999999999988 33 34444443 268999999865422 222 2333321 223 6
Q ss_pred eEEEeecChHHHHHHHHhcCEEEEcCCC--CCCcHHHHHHHHcCCC
Q 010752 459 ARGVAKFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTV 502 (502)
Q Consensus 459 v~~~~~~~~~~~~~ila~ADi~l~PS~~--E~fglv~lEAma~G~P 502 (502)
|.|+..++...+..++.++|+.+..|+. |.+|..-+-||..|.+
T Consensus 525 VvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL 570 (713)
T PF00343_consen 525 VVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGAL 570 (713)
T ss_dssp EEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-E
T ss_pred EEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCe
Confidence 8888889999999999999999999984 9999999999999863
No 117
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.26 E-value=8.9e-05 Score=75.10 Aligned_cols=81 Identities=20% Similarity=0.291 Sum_probs=58.8
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCEE
Q 010752 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (502)
Q Consensus 401 ~~p~i~~iGrl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi~ 480 (502)
...+++++|..... .++++++.+ ++.+++++|....+ ...+++. +..|..+...++|+.||++
T Consensus 192 ~~~iLv~~gg~~~~----~~~~~l~~~--~~~~~~v~g~~~~~----------~~~~ni~-~~~~~~~~~~~~m~~ad~v 254 (318)
T PF13528_consen 192 EPKILVYFGGGGPG----DLIEALKAL--PDYQFIVFGPNAAD----------PRPGNIH-VRPFSTPDFAELMAAADLV 254 (318)
T ss_pred CCEEEEEeCCCcHH----HHHHHHHhC--CCCeEEEEcCCccc----------ccCCCEE-EeecChHHHHHHHHhCCEE
Confidence 34488999998766 678888886 46788888776311 1145566 4455657778999999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCC
Q 010752 481 LIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 481 l~PS~~E~fglv~lEAma~G~P 502 (502)
|--+-+ .++.||+++|+|
T Consensus 255 Is~~G~----~t~~Ea~~~g~P 272 (318)
T PF13528_consen 255 ISKGGY----TTISEALALGKP 272 (318)
T ss_pred EECCCH----HHHHHHHHcCCC
Confidence 976433 459999999998
No 118
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=98.10 E-value=2.4e-05 Score=83.07 Aligned_cols=89 Identities=9% Similarity=0.053 Sum_probs=74.7
Q ss_pred cEEEEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCEE
Q 010752 403 PVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (502)
Q Consensus 403 p~i~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi~ 480 (502)
+-++.++. +..|+++++|.+ |+++|-| |.+.+ +...|++| .++ ++++.+..+..+.+.+++..||++
T Consensus 283 ~~~l~~t~-------s~~I~~i~~Lv~~lPd~~f~I-ga~te-~s~kL~~L-~~y-~nvvly~~~~~~~l~~ly~~~dly 351 (438)
T TIGR02919 283 KQALILTN-------SDQIEHLEEIVQALPDYHFHI-AALTE-MSSKLMSL-DKY-DNVKLYPNITTQKIQELYQTCDIY 351 (438)
T ss_pred ccEEEECC-------HHHHHHHHHHHHhCCCcEEEE-EecCc-ccHHHHHH-Hhc-CCcEEECCcChHHHHHHHHhccEE
Confidence 35666662 889999999876 7999999 77753 46788888 677 568877777777788999999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCC
Q 010752 481 LIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 481 l~PS~~E~fglv~lEAma~G~P 502 (502)
|-.|..|+++++++||+..|+|
T Consensus 352 Ldin~~e~~~~al~eA~~~G~p 373 (438)
T TIGR02919 352 LDINHGNEILNAVRRAFEYNLL 373 (438)
T ss_pred EEccccccHHHHHHHHHHcCCc
Confidence 9999999999999999999998
No 119
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=98.05 E-value=0.0001 Score=67.97 Aligned_cols=130 Identities=21% Similarity=0.269 Sum_probs=71.8
Q ss_pred CcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcC-CccchHHHHHHHhccCCCCcCCCeEEEEEecCccc
Q 010752 193 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAND-WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQ 271 (502)
Q Consensus 193 ~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~-~~t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~ 271 (502)
|......-..-+++++++++.|... .|.|| ||.+|. |. -+.++|..+ .++|++.-.- ..|.
T Consensus 39 ~~~~~e~~~~rg~av~~a~~~L~~~-------Gf~PD-vI~~H~GWG---e~Lflkdv~------P~a~li~Y~E-~~y~ 100 (171)
T PF12000_consen 39 YVRDFEAAVLRGQAVARAARQLRAQ-------GFVPD-VIIAHPGWG---ETLFLKDVF------PDAPLIGYFE-FYYR 100 (171)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHc-------CCCCC-EEEEcCCcc---hhhhHHHhC------CCCcEEEEEE-EEec
Confidence 3444444444566666666665432 46799 788884 43 345788776 7888876653 1110
Q ss_pred cccccccccccCCCcccccccccccCCCCCcccchHHHH-HHHHHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccE
Q 010752 272 GRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWM-KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGI 350 (502)
Q Consensus 272 g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~-k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i 350 (502)
..-...+.+.++..+.+- ....+..|.. -..+..||..++++.+.++.+-. .++ .+|
T Consensus 101 -----~~g~d~~FDpe~p~~~~~------~~~~r~rN~~~l~~l~~~D~~isPT~wQ~~~fP~----------~~r-~kI 158 (171)
T PF12000_consen 101 -----ASGADVGFDPEFPPSLDD------RARLRMRNAHNLLALEQADAGISPTRWQRSQFPA----------EFR-SKI 158 (171)
T ss_pred -----CCCCcCCCCCCCCCCHHH------HHHHHHHhHHHHHHHHhCCcCcCCCHHHHHhCCH----------HHH-cCc
Confidence 000111111111110000 0001222332 34577899999999999987653 111 289
Q ss_pred EEeeCCCcCCCC
Q 010752 351 KGIVNGMDVQEW 362 (502)
Q Consensus 351 ~vI~NGvd~~~~ 362 (502)
.||+-|||++.+
T Consensus 159 ~VihdGiDt~~~ 170 (171)
T PF12000_consen 159 SVIHDGIDTDRF 170 (171)
T ss_pred EEeecccchhhc
Confidence 999999998754
No 120
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=97.93 E-value=0.0013 Score=67.50 Aligned_cols=134 Identities=20% Similarity=0.194 Sum_probs=74.4
Q ss_pred HHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEe-eCCCcCCC----CCCCcccccccccCcchhccchHHHHH
Q 010752 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGI-VNGMDVQE----WNPLTDKYIGVKYDASTVMDAKPLLKE 388 (502)
Q Consensus 314 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI-~NGvd~~~----~~p~~~~~i~~~~~~~~~~~~k~~~k~ 388 (502)
+..||.+++++-.-...+.. +|.. + .+. +||++-.. |.|. .
T Consensus 123 ~Pla~~i~~P~~~~~~~~~~---~G~~-~--------~i~~y~G~~E~ayl~~F~Pd----------------------~ 168 (335)
T PF04007_consen 123 LPLADVIITPEAIPKEFLKR---FGAK-N--------QIRTYNGYKELAYLHPFKPD----------------------P 168 (335)
T ss_pred hhcCCeeECCcccCHHHHHh---cCCc-C--------CEEEECCeeeEEeecCCCCC----------------------h
Confidence 44688888877654444442 4433 2 233 56665432 4443 3
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccC------HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEE
Q 010752 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKG------SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV 462 (502)
Q Consensus 389 ~l~~~~gl~~~~~~p~i~~iGrl~~~KG------~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~ 462 (502)
++.+++|+. +.++|+. |.++.+- -.++-+.++.|.+..-.+|++-...+ . +++.++++ +
T Consensus 169 ~vl~~lg~~---~~~yIvv--R~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~-~----~~~~~~~~--~--- 233 (335)
T PF04007_consen 169 EVLKELGLD---DEPYIVV--RPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYED-Q----RELFEKYG--V--- 233 (335)
T ss_pred hHHHHcCCC---CCCEEEE--EeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcc-h----hhHHhccC--c---
Confidence 567888854 4466653 5554332 23344555555554333666654331 1 12223332 1
Q ss_pred eecChH--HHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 463 AKFNIP--LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 463 ~~~~~~--~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
..+.+ ..+.++..||+++-- -|....||...|||
T Consensus 234 -~i~~~~vd~~~Ll~~a~l~Ig~-----ggTMa~EAA~LGtP 269 (335)
T PF04007_consen 234 -IIPPEPVDGLDLLYYADLVIGG-----GGTMAREAALLGTP 269 (335)
T ss_pred -cccCCCCCHHHHHHhcCEEEeC-----CcHHHHHHHHhCCC
Confidence 22222 234799999999843 46889999999998
No 121
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=97.70 E-value=0.0027 Score=66.10 Aligned_cols=201 Identities=17% Similarity=0.200 Sum_probs=112.1
Q ss_pred CCCEEEEEcCCccchHHHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccch
Q 010752 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (502)
Q Consensus 227 ~pDvVih~h~~~t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~ 306 (502)
+||+|+...|-.+.+.++..... .++|+++ +|. |.... +.+++ .
T Consensus 93 ~Pd~vlv~GD~~~~la~alaA~~-------~~IPv~H-vea----G~rs~------~~~eE------------------~ 136 (365)
T TIGR03568 93 KPDLVVVLGDRFEMLAAAIAAAL-------LNIPIAH-IHG----GEVTE------GAIDE------------------S 136 (365)
T ss_pred CCCEEEEeCCchHHHHHHHHHHH-------hCCcEEE-EEC----CccCC------CCchH------------------H
Confidence 79966666677777776666654 5889883 332 21110 01111 1
Q ss_pred HHHHHHHHHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeC-CCcCCCCCCCcccccccccCcchhccchHH
Q 010752 307 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN-GMDVQEWNPLTDKYIGVKYDASTVMDAKPL 385 (502)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~N-Gvd~~~~~p~~~~~i~~~~~~~~~~~~k~~ 385 (502)
.+. ..-+-||..++.++..++.+.+ -|++.+ ++.++-| ++|.-.+....
T Consensus 137 ~r~--~i~~la~l~f~~t~~~~~~L~~---eg~~~~------~i~~tG~~~iD~l~~~~~~------------------- 186 (365)
T TIGR03568 137 IRH--AITKLSHLHFVATEEYRQRVIQ---MGEDPD------RVFNVGSPGLDNILSLDLL------------------- 186 (365)
T ss_pred HHH--HHHHHHhhccCCCHHHHHHHHH---cCCCCC------cEEEECCcHHHHHHhhhcc-------------------
Confidence 111 1123578888899999988874 455544 6666655 44533221110
Q ss_pred HHHHHHHHhCCCCCCCCcEE-EEEcCcc--ccc---CHHHHHHHHhhcccCCeEEEEE-e-CCChhhHHHHHHHHHHCCC
Q 010752 386 LKEALQAEVGLPVDRNIPVI-GFIGRLE--EQK---GSDILAAAIPHFIKENVQIIVL-G-TGKKPMEKQLEQLEILYPE 457 (502)
Q Consensus 386 ~k~~l~~~~gl~~~~~~p~i-~~iGrl~--~~K---G~d~ll~Al~~L~~~~v~lviv-G-~g~~~~~~~l~~l~~~~~~ 457 (502)
.++.+.+++|++. +.+++ +.+-|-+ ... .+..+++++..+ ..++.++.- + .+.+...+.++++... .+
T Consensus 187 ~~~~~~~~lgl~~--~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~-~~~~~vi~P~~~p~~~~i~~~i~~~~~~-~~ 262 (365)
T TIGR03568 187 SKEELEEKLGIDL--DKPYALVTFHPVTLEKESAEEQIKELLKALDEL-NKNYIFTYPNADAGSRIINEAIEEYVNE-HP 262 (365)
T ss_pred CHHHHHHHhCCCC--CCCEEEEEeCCCcccccCchHHHHHHHHHHHHh-ccCCEEEEeCCCCCchHHHHHHHHHhcC-CC
Confidence 1356677888742 33453 3333322 333 344555555544 224423221 2 2222334455555322 34
Q ss_pred ceEEEeecChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 458 KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 458 ~v~~~~~~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
++.+....+..+...+++.||++|--|. |.+ .||+++|+|
T Consensus 263 ~v~l~~~l~~~~~l~Ll~~a~~vitdSS----ggi-~EA~~lg~P 302 (365)
T TIGR03568 263 NFRLFKSLGQERYLSLLKNADAVIGNSS----SGI-IEAPSFGVP 302 (365)
T ss_pred CEEEECCCChHHHHHHHHhCCEEEEcCh----hHH-HhhhhcCCC
Confidence 6888888888888899999999995443 344 899999998
No 122
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.69 E-value=0.001 Score=68.14 Aligned_cols=217 Identities=15% Similarity=0.096 Sum_probs=128.8
Q ss_pred cchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccc--hHHHHHHHhccCCCCcCCCeEEEEEecCccc
Q 010752 194 QDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS--LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQ 271 (502)
Q Consensus 194 ~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~--~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~ 271 (502)
.+-..++..+.+...+..+.+-.+ +|| ++.+-|.+.. .+.-.+++.. .++|+++-+--..+
T Consensus 61 ~EVL~~lp~llk~~~~~~~~i~~~---------kpD-~~i~IDsPdFnl~vak~lrk~~------p~i~iihYV~PsVW- 123 (381)
T COG0763 61 VEVLGRLPRLLKIRRELVRYILAN---------KPD-VLILIDSPDFNLRVAKKLRKAG------PKIKIIHYVSPSVW- 123 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc---------CCC-EEEEeCCCCCchHHHHHHHHhC------CCCCeEEEECccee-
Confidence 334444444555555666654332 799 6777776653 3344455432 46888877742211
Q ss_pred cccccccccccCCCcccccccccccCCCCCcccchHHHHHHHHHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEE
Q 010752 272 GRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK 351 (502)
Q Consensus 272 g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~ 351 (502)
.|+. +| ........|+++++=|+..+.+.. .|.+ .+
T Consensus 124 ---------------AWr~-------------~R----a~~i~~~~D~lLailPFE~~~y~k---~g~~---------~~ 159 (381)
T COG0763 124 ---------------AWRP-------------KR----AVKIAKYVDHLLAILPFEPAFYDK---FGLP---------CT 159 (381)
T ss_pred ---------------eech-------------hh----HHHHHHHhhHeeeecCCCHHHHHh---cCCC---------eE
Confidence 0100 02 122345799999999998888874 3332 34
Q ss_pred EeeCCC-cCCCCCCCcccccccccCcchhccchHHHHHHHHHHhCCCCCCCCc-EEEEEcC-ccc-ccCHHHHHHHHhhc
Q 010752 352 GIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP-VIGFIGR-LEE-QKGSDILAAAIPHF 427 (502)
Q Consensus 352 vI~NGv-d~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~p-~i~~iGr-l~~-~KG~d~ll~Al~~L 427 (502)
.|-+.+ |.-.+.+. ++++++++|++. +.+ +.+..|+ -.+ .+-...+++|+.+|
T Consensus 160 yVGHpl~d~i~~~~~---------------------r~~ar~~l~~~~--~~~~lalLPGSR~sEI~rl~~~f~~a~~~l 216 (381)
T COG0763 160 YVGHPLADEIPLLPD---------------------REAAREKLGIDA--DEKTLALLPGSRRSEIRRLLPPFVQAAQEL 216 (381)
T ss_pred EeCChhhhhcccccc---------------------HHHHHHHhCCCC--CCCeEEEecCCcHHHHHHHHHHHHHHHHHH
Confidence 554433 21112221 566888998874 344 4555555 334 56678899999999
Q ss_pred cc--CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 428 IK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 428 ~~--~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
.+ ++.++++--... ..+.++....+.... .......+...+..|+.||+.+..| |.+.||+|.+|+|
T Consensus 217 ~~~~~~~~~vlp~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P 285 (381)
T COG0763 217 KARYPDLKFVLPLVNA--KYRRIIEEALKWEVA-GLSLILIDGEKRKAFAAADAALAAS-----GTATLEAALAGTP 285 (381)
T ss_pred HhhCCCceEEEecCcH--HHHHHHHHHhhcccc-CceEEecCchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCC
Confidence 75 688988865443 222333333332321 2233344556778999999999875 7999999999998
No 123
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=97.63 E-value=0.0098 Score=62.24 Aligned_cols=84 Identities=17% Similarity=0.135 Sum_probs=53.9
Q ss_pred CCcEEEEEcCccc---ccCHHHHHHHHhhcccCCeEEE-EEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHh
Q 010752 401 NIPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 476 (502)
Q Consensus 401 ~~p~i~~iGrl~~---~KG~d~ll~Al~~L~~~~v~lv-ivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ 476 (502)
+.++++..|.... .+....+++++..+ +.+++ .+|..... . ...++++......+. ..+|..
T Consensus 239 ~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~---~~~~i~~~g~~~~~--~------~~~~~~v~~~~~~p~---~~ll~~ 304 (401)
T cd03784 239 RPPVYVGFGSMVVRDPEALARLDVEAVATL---GQRAILSLGWGGLG--A------EDLPDNVRVVDFVPH---DWLLPR 304 (401)
T ss_pred CCcEEEeCCCCcccCHHHHHHHHHHHHHHc---CCeEEEEccCcccc--c------cCCCCceEEeCCCCH---HHHhhh
Confidence 4456777788754 44556677777665 45544 45544311 1 234566766665442 357999
Q ss_pred cCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 477 ADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 477 ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
||++| .-+-..++.||+++|+|
T Consensus 305 ~d~~I----~hgG~~t~~eal~~GvP 326 (401)
T cd03784 305 CAAVV----HHGGAGTTAAALRAGVP 326 (401)
T ss_pred hheee----ecCCchhHHHHHHcCCC
Confidence 99999 33335899999999998
No 124
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.53 E-value=0.017 Score=63.10 Aligned_cols=144 Identities=13% Similarity=0.144 Sum_probs=90.1
Q ss_pred HHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCC-cCCCCCCCcccccccccCcchhccchHHHHHHHHH
Q 010752 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 392 (502)
Q Consensus 314 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGv-d~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~ 392 (502)
-+..|+++|+=+...+.+.+ .|+ +++.+-|.+ |. ..+.. .+++.++
T Consensus 359 ~k~vD~ll~IfPFE~~~y~~---~gv---------~v~yVGHPL~d~--i~~~~-------------------~~~~~r~ 405 (608)
T PRK01021 359 EKYLDLLLLILPFEQNLFKD---SPL---------RTVYLGHPLVET--ISSFS-------------------PNLSWKE 405 (608)
T ss_pred HHHhhhheecCccCHHHHHh---cCC---------CeEEECCcHHhh--cccCC-------------------CHHHHHH
Confidence 34689999999998888774 333 345555543 22 11111 1355688
Q ss_pred HhCCCCCCCCcEE-EEEcC-ccc-ccCHHHHHHHHh--hcccCCeEEEEEeCCChhhHHHHHHHHHHCC-CceEEEeecC
Q 010752 393 EVGLPVDRNIPVI-GFIGR-LEE-QKGSDILAAAIP--HFIKENVQIIVLGTGKKPMEKQLEQLEILYP-EKARGVAKFN 466 (502)
Q Consensus 393 ~~gl~~~~~~p~i-~~iGr-l~~-~KG~d~ll~Al~--~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~-~~v~~~~~~~ 466 (502)
++|++ ++.++| ++.|+ -.| .+....+++|+. ++. ++.++++-.. ++..++.+++..+..+ ..+... .
T Consensus 406 ~lgl~--~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~-~~l~fvvp~a-~~~~~~~i~~~~~~~~~~~~~ii---~ 478 (608)
T PRK01021 406 QLHLP--SDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLA-STHQLLVSSA-NPKYDHLILEVLQQEGCLHSHIV---P 478 (608)
T ss_pred HcCCC--CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhc-cCeEEEEecC-chhhHHHHHHHHhhcCCCCeEEe---c
Confidence 88885 355554 55555 434 666888999997 553 4678877433 3334455666554322 112222 1
Q ss_pred hHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 467 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 467 ~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
+...+++|++||+.+..| |.+.|||+.+|+|
T Consensus 479 ~~~~~~~m~aaD~aLaaS-----GTaTLEaAL~g~P 509 (608)
T PRK01021 479 SQFRYELMRECDCALAKC-----GTIVLETALNQTP 509 (608)
T ss_pred CcchHHHHHhcCeeeecC-----CHHHHHHHHhCCC
Confidence 222468999999999886 7999999999998
No 125
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=97.45 E-value=0.0094 Score=60.77 Aligned_cols=79 Identities=14% Similarity=0.177 Sum_probs=51.3
Q ss_pred EEEEEcCcccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCEEEEc
Q 010752 404 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIP 483 (502)
Q Consensus 404 ~i~~iGrl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi~l~P 483 (502)
++++.|. .|...+++++.++ +++++++ |..+. .. ..+++++.... +..+.+.++|+.||+++.-
T Consensus 191 iLv~~g~----~~~~~l~~~l~~~--~~~~~i~-~~~~~-~~-------~~~~~~v~~~~-~~~~~~~~~l~~ad~vI~~ 254 (321)
T TIGR00661 191 ILVYIGF----EYRYKILELLGKI--ANVKFVC-YSYEV-AK-------NSYNENVEIRR-ITTDNFKELIKNAELVITH 254 (321)
T ss_pred EEEECCc----CCHHHHHHHHHhC--CCeEEEE-eCCCC-Cc-------cccCCCEEEEE-CChHHHHHHHHhCCEEEEC
Confidence 5556444 3566778888766 4555544 43221 11 12355676664 4445678899999999987
Q ss_pred CCCCCCcHHHHHHHHcCCC
Q 010752 484 SRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 484 S~~E~fglv~lEAma~G~P 502 (502)
+-+ .++.||+++|+|
T Consensus 255 ~G~----~t~~Ea~~~g~P 269 (321)
T TIGR00661 255 GGF----SLISEALSLGKP 269 (321)
T ss_pred CCh----HHHHHHHHcCCC
Confidence 644 479999999998
No 126
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.43 E-value=0.011 Score=61.62 Aligned_cols=146 Identities=22% Similarity=0.237 Sum_probs=93.6
Q ss_pred HHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHH
Q 010752 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (502)
Q Consensus 314 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~ 393 (502)
-+..|.++++=++..+.+.+ .|+ +++.|-|.+ .+...+..+ +...++.
T Consensus 131 ~~~~D~ll~ifPFE~~~y~~---~g~---------~~~~VGHPl-~d~~~~~~~-------------------~~~~~~~ 178 (373)
T PF02684_consen 131 KKYVDHLLVIFPFEPEFYKK---HGV---------PVTYVGHPL-LDEVKPEPD-------------------RAEAREK 178 (373)
T ss_pred HHHHhheeECCcccHHHHhc---cCC---------CeEEECCcc-hhhhccCCC-------------------HHHHHHh
Confidence 34689999999998888774 343 345665543 111212110 2344455
Q ss_pred hCCCCCCCCcEEE-EEcC-ccc-ccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChH
Q 010752 394 VGLPVDRNIPVIG-FIGR-LEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIP 468 (502)
Q Consensus 394 ~gl~~~~~~p~i~-~iGr-l~~-~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~ 468 (502)
+ ++ ++.|+|+ +.|+ -.+ .+.+..+++++.++.+ +++++++-.... ..++.+++.....+.++..... ..
T Consensus 179 ~-l~--~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~-~~~~~i~~~~~~~~~~~~~~~~--~~ 252 (373)
T PF02684_consen 179 L-LD--PDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPE-VHEELIEEILAEYPPDVSIVII--EG 252 (373)
T ss_pred c-CC--CCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCH-HHHHHHHHHHHhhCCCCeEEEc--CC
Confidence 4 43 5667654 4454 444 5556899999999887 589988876543 3445566665555543433322 33
Q ss_pred HHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 469 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 469 ~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
...+.|+.||+.+..| |.+.|||+.+|+|
T Consensus 253 ~~~~~m~~ad~al~~S-----GTaTLE~Al~g~P 281 (373)
T PF02684_consen 253 ESYDAMAAADAALAAS-----GTATLEAALLGVP 281 (373)
T ss_pred chHHHHHhCcchhhcC-----CHHHHHHHHhCCC
Confidence 4567999999999887 7999999999998
No 127
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=97.21 E-value=0.0038 Score=64.51 Aligned_cols=206 Identities=17% Similarity=0.153 Sum_probs=109.0
Q ss_pred CCCEEEEEcCCccchHHHHHHHhccCCCCcCCCeEEEEEecCccccccccccccccCCCcccccccccccCCCCCcccch
Q 010752 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (502)
Q Consensus 227 ~pDvVih~h~~~t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~ 306 (502)
+||+|+..-|-.+.++++..... .++|+ ..+|. |.-.. +. ..+.|+
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~-------~~ipv-~Hiea----GlRs~-d~-~~g~~d-------------------- 112 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFY-------LNIPV-AHIEA----GLRSG-DR-TEGMPD-------------------- 112 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHH-------TT-EE-EEES---------S--T-TSSTTH--------------------
T ss_pred CCCEEEEEcCCchHHHHHHHHHH-------hCCCE-EEecC----CCCcc-cc-CCCCch--------------------
Confidence 69977777788888887777664 68994 44542 21000 00 001222
Q ss_pred HHHHHHHH-HhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeC-CCcCCCCCCCcccccccccCcchhccchH
Q 010752 307 INWMKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN-GMDVQEWNPLTDKYIGVKYDASTVMDAKP 384 (502)
Q Consensus 307 ~~~~k~~~-~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~N-Gvd~~~~~p~~~~~i~~~~~~~~~~~~k~ 384 (502)
...|..+ +-||.-++.++..++.+.+ .|++++ +|.++-| ++|.-.. .+.
T Consensus 113 -e~~R~~i~~la~lhf~~t~~~~~~L~~---~G~~~~------rI~~vG~~~~D~l~~-------------------~~~ 163 (346)
T PF02350_consen 113 -EINRHAIDKLAHLHFAPTEEARERLLQ---EGEPPE------RIFVVGNPGIDALLQ-------------------NKE 163 (346)
T ss_dssp -HHHHHHHHHH-SEEEESSHHHHHHHHH---TT--GG------GEEE---HHHHHHHH-------------------HHH
T ss_pred -hhhhhhhhhhhhhhccCCHHHHHHHHh---cCCCCC------eEEEEChHHHHHHHH-------------------hHH
Confidence 2222222 3599999999999999995 577766 7788765 2332110 000
Q ss_pred HHHHHHHHHhCCCCCCCCcEEEEEc-Cccc---ccCHHHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHHCCCce
Q 010752 385 LLKEALQAEVGLPVDRNIPVIGFIG-RLEE---QKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKA 459 (502)
Q Consensus 385 ~~k~~l~~~~gl~~~~~~p~i~~iG-rl~~---~KG~d~ll~Al~~L~~-~~v~lvivG~g~~~~~~~l~~l~~~~~~~v 459 (502)
...+.+. ..++..+...++++... |.+- ......+.+++..|.+ +++++++.....+...+.+.+...++ .++
T Consensus 164 ~~~~~~~-~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~l~~~-~~v 241 (346)
T PF02350_consen 164 EIEEKYK-NSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRGSDIIIEKLKKY-DNV 241 (346)
T ss_dssp TTCC-HH-HHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHHHHHHHHHTT--TTE
T ss_pred HHhhhhh-hHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHHHHHHHHhccc-CCE
Confidence 0000110 00110012455555553 3321 2445677777777766 48999998876666667777666666 478
Q ss_pred EEEeecChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 460 RGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 460 ~~~~~~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
++...........+++.|+++|--| |-++-||..+|+|
T Consensus 242 ~~~~~l~~~~~l~ll~~a~~vvgdS-----sGI~eEa~~lg~P 279 (346)
T PF02350_consen 242 RLIEPLGYEEYLSLLKNADLVVGDS-----SGIQEEAPSLGKP 279 (346)
T ss_dssp EEE----HHHHHHHHHHESEEEESS-----HHHHHHGGGGT--
T ss_pred EEECCCCHHHHHHHHhcceEEEEcC-----ccHHHHHHHhCCe
Confidence 8888888888889999999998544 4445599999988
No 128
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=97.19 E-value=0.066 Score=56.43 Aligned_cols=140 Identities=14% Similarity=0.008 Sum_probs=82.8
Q ss_pred HHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHHH
Q 010752 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (502)
Q Consensus 314 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~ 393 (502)
-+.||.|.+..+..++.+.+ .|+ ++.++-|.+=. ...+.. + .
T Consensus 158 ~~~a~~v~~~~~~t~~~l~~---~g~---------k~~~vGnPv~d-~l~~~~--------------------~-----~ 199 (396)
T TIGR03492 158 SRRCLAVFVRDRLTARDLRR---QGV---------RASYLGNPMMD-GLEPPE--------------------R-----K 199 (396)
T ss_pred chhhCEEeCCCHHHHHHHHH---CCC---------eEEEeCcCHHh-cCcccc--------------------c-----c
Confidence 35799999988888888773 222 46666665521 111110 0 0
Q ss_pred hCCCCCCCCc-EEEEEcCcc--cccCHHHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHHCCC------------
Q 010752 394 VGLPVDRNIP-VIGFIGRLE--EQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPE------------ 457 (502)
Q Consensus 394 ~gl~~~~~~p-~i~~iGrl~--~~KG~d~ll~Al~~L~~-~~v~lvivG~g~~~~~~~l~~l~~~~~~------------ 457 (502)
+++ ++.+ ++++.|.-. -.+++..+++++++|.+ +++++++.-.+.. ..+.+++.....+-
T Consensus 200 -~l~--~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~-~~~~~~~~l~~~g~~~~~~~~~~~~~ 275 (396)
T TIGR03492 200 -PLL--TGRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSL-SLEKLQAILEDLGWQLEGSSEDQTSL 275 (396)
T ss_pred -ccC--CCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCC-CHHHHHHHHHhcCceecCCccccchh
Confidence 232 2334 455566653 36678899999999865 4788876432222 12334333332221
Q ss_pred ----ceEEEeecChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 458 ----KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 458 ----~v~~~~~~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
.+.... + ...+..+|+.||++|..| |.+.+|++++|+|
T Consensus 276 ~~~~~~~v~~-~-~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~P 317 (396)
T TIGR03492 276 FQKGTLEVLL-G-RGAFAEILHWADLGIAMA-----GTATEQAVGLGKP 317 (396)
T ss_pred hccCceEEEe-c-hHhHHHHHHhCCEEEECc-----CHHHHHHHHhCCC
Confidence 122222 2 245678999999999885 4666999999998
No 129
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=96.68 E-value=0.28 Score=48.01 Aligned_cols=105 Identities=11% Similarity=0.047 Sum_probs=58.2
Q ss_pred HHHHhCCCCCCCCcEEEEEcCcccccCH-----HHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHH-CCCceEEE
Q 010752 390 LQAEVGLPVDRNIPVIGFIGRLEEQKGS-----DILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEIL-YPEKARGV 462 (502)
Q Consensus 390 l~~~~gl~~~~~~p~i~~iGrl~~~KG~-----d~ll~Al~~L~~-~~v~lvivG~g~~~~~~~l~~l~~~-~~~~v~~~ 462 (502)
++++++ | .+...+-+++|.=..+-.. +++..++.+..+ ....+++-=+.- -.+..+.+... ++ ...+.
T Consensus 152 ~~~~~~-p-~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRR--Tp~~~~s~l~~~l~-s~~~i 226 (329)
T COG3660 152 AFKHLL-P-LPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRR--TPDTVKSILKNNLN-SSPGI 226 (329)
T ss_pred HHHhhC-C-CCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecC--CcHHHHHHHHhccc-cCcee
Confidence 344443 2 2466688999876654443 334444444434 466777655432 12334443333 22 12233
Q ss_pred eecCh----HHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 463 AKFNI----PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 463 ~~~~~----~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
.+-+. .-..++|+.||.++.+.-. =..+-||.+.|.|
T Consensus 227 ~w~~~d~g~NPY~~~La~Adyii~TaDS---inM~sEAasTgkP 267 (329)
T COG3660 227 VWNNEDTGYNPYIDMLAAADYIISTADS---INMCSEAASTGKP 267 (329)
T ss_pred EeCCCCCCCCchHHHHhhcceEEEecch---hhhhHHHhccCCC
Confidence 33221 2344799999999988543 2346799999987
No 130
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=96.56 E-value=0.42 Score=52.10 Aligned_cols=83 Identities=10% Similarity=-0.033 Sum_probs=52.1
Q ss_pred CcEEEEEcCccc-----ccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHH--
Q 010752 402 IPVIGFIGRLEE-----QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII-- 474 (502)
Q Consensus 402 ~p~i~~iGrl~~-----~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~il-- 474 (502)
.++++..|.... .+-...+++|+.++ +.++++-..+.. . . ...++++....+++.. ++|
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l---~~~viw~~~~~~-~-~------~~~p~Nv~i~~w~Pq~---~lL~h 362 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKL---PYNVLWKYDGEV-E-A------INLPANVLTQKWFPQR---AVLKH 362 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhC---CCeEEEEECCCc-C-c------ccCCCceEEecCCCHH---HHhcC
Confidence 356667788642 23356677777766 346666444321 1 0 2356778777666653 467
Q ss_pred HhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 475 AGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 475 a~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
..++++| .-+-..++.||+.+|+|
T Consensus 363 p~v~~fI----tHGG~~s~~Eal~~GvP 386 (507)
T PHA03392 363 KNVKAFV----TQGGVQSTDEAIDALVP 386 (507)
T ss_pred CCCCEEE----ecCCcccHHHHHHcCCC
Confidence 4588888 33445789999999998
No 131
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.49 E-value=0.18 Score=50.56 Aligned_cols=145 Identities=21% Similarity=0.251 Sum_probs=81.8
Q ss_pred HHHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHHHH
Q 010752 313 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 392 (502)
Q Consensus 313 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~ 392 (502)
.+.-||.+++++....+++. ++|-.+.++..-..+.-+.| ...|.|.. ++.+
T Consensus 123 ~~Pla~~ii~P~~~~~~~~~---~~G~~p~~i~~~~giae~~~---v~~f~pd~----------------------evlk 174 (346)
T COG1817 123 TLPLADVIITPEAIDEEELL---DFGADPNKISGYNGIAELAN---VYGFVPDP----------------------EVLK 174 (346)
T ss_pred chhhhhheecccccchHHHH---HhCCCccceecccceeEEee---cccCCCCH----------------------HHHH
Confidence 35679999999988888877 46776665444334444433 33355643 5678
Q ss_pred HhCCCCCCCCcEEEEE----cC--cccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecC
Q 010752 393 EVGLPVDRNIPVIGFI----GR--LEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 466 (502)
Q Consensus 393 ~~gl~~~~~~p~i~~i----Gr--l~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~ 466 (502)
++|+.. +.++|++= +. ...+++.+.+.++++.|.+.. +|++-. .+ ..++.-+.+.. ....+-.
T Consensus 175 eLgl~~--~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~g--iV~ipr-~~----~~~eife~~~n--~i~pk~~ 243 (346)
T COG1817 175 ELGLEE--GETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKYG--IVLIPR-EK----EQAEIFEGYRN--IIIPKKA 243 (346)
T ss_pred HcCCCC--CCceEEEeeccccceeeccccchhhHHHHHHHHHhCc--EEEecC-ch----hHHHHHhhhcc--ccCCccc
Confidence 899874 34555431 11 223677777888888885544 444433 22 22333333321 1111111
Q ss_pred hHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 467 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 467 ~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
.+.+ .++=.|++++= +-|.-..||...|||
T Consensus 244 vD~l-~Llyya~lvig-----~ggTMarEaAlLGtp 273 (346)
T COG1817 244 VDTL-SLLYYATLVIG-----AGGTMAREAALLGTP 273 (346)
T ss_pred ccHH-HHHhhhheeec-----CCchHHHHHHHhCCc
Confidence 1111 25666777663 346778899999997
No 132
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=96.28 E-value=0.67 Score=48.46 Aligned_cols=160 Identities=18% Similarity=0.094 Sum_probs=101.1
Q ss_pred HHHHHHHHHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHH
Q 010752 307 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 386 (502)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~ 386 (502)
-.+.+..+...|.|++.|+..++++.+ .|.. ++.+.-| +....... ..-+..
T Consensus 168 ~~~~~~~~~~i~li~aQse~D~~Rf~~---LGa~--------~v~v~GN---lKfd~~~~--------------~~~~~~ 219 (419)
T COG1519 168 KFLARLLFKNIDLILAQSEEDAQRFRS---LGAK--------PVVVTGN---LKFDIEPP--------------PQLAAE 219 (419)
T ss_pred HHHHHHHHHhcceeeecCHHHHHHHHh---cCCc--------ceEEecc---eeecCCCC--------------hhhHHH
Confidence 344577788999999999999999996 5544 3344333 11111111 112344
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccC-HHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEe
Q 010752 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKG-SDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA 463 (502)
Q Consensus 387 k~~l~~~~gl~~~~~~p~i~~iGrl~~~KG-~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~ 463 (502)
.++++..++. .+|+++..+. +.| -+.++++...|++ +|..++++=-. ++--+.++++.++.+-.+...-
T Consensus 220 ~~~~r~~l~~----~r~v~iaaST---H~GEeei~l~~~~~l~~~~~~~llIlVPRH-pERf~~v~~l~~~~gl~~~~rS 291 (419)
T COG1519 220 LAALRRQLGG----HRPVWVAAST---HEGEEEIILDAHQALKKQFPNLLLILVPRH-PERFKAVENLLKRKGLSVTRRS 291 (419)
T ss_pred HHHHHHhcCC----CCceEEEecC---CCchHHHHHHHHHHHHhhCCCceEEEecCC-hhhHHHHHHHHHHcCCeEEeec
Confidence 6677888763 2778888777 445 4458899988877 47766666544 4344556666665432222111
Q ss_pred ec-------------ChHHHHHHHHhcCEEEEcCC-CCCCcHHHHHHHHcCCC
Q 010752 464 KF-------------NIPLAHMIIAGADFILIPSR-FEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 464 ~~-------------~~~~~~~ila~ADi~l~PS~-~E~fglv~lEAma~G~P 502 (502)
.- .--++..+|..||+.++--. .+--|=-.||+.++|+|
T Consensus 292 ~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN~LEpa~~~~p 344 (419)
T COG1519 292 QGDPPFSDTDVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHNPLEPAAFGTP 344 (419)
T ss_pred CCCCCCCCCcEEEEecHhHHHHHHhhccEEEECCcccCCCCCChhhHHHcCCC
Confidence 11 11245679999999999844 45566679999999997
No 133
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=96.19 E-value=0.015 Score=61.50 Aligned_cols=35 Identities=17% Similarity=0.300 Sum_probs=25.6
Q ss_pred CCCEEEEEcCCccchHHHHHHHhccCCCCcCCCeEEEEEecCc
Q 010752 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIA 269 (502)
Q Consensus 227 ~pDvVih~h~~~t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~ 269 (502)
.|| +||.|-.-+++++.++..+. ++|..++-|...
T Consensus 401 ~Pd-lI~GnYsDgnlvA~LLs~~l-------gv~~~~iaHsLe 435 (550)
T PF00862_consen 401 KPD-LIIGNYSDGNLVASLLSRKL-------GVTQCFIAHSLE 435 (550)
T ss_dssp --S-EEEEEHHHHHHHHHHHHHHH-------T-EEEEE-SS-H
T ss_pred CCc-EEEeccCcchHHHHHHHhhc-------CCceehhhhccc
Confidence 599 89999777788888888764 999999999764
No 134
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=95.53 E-value=0.086 Score=56.26 Aligned_cols=106 Identities=20% Similarity=0.093 Sum_probs=63.9
Q ss_pred HHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC---CceEEEeec
Q 010752 391 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP---EKARGVAKF 465 (502)
Q Consensus 391 ~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~~---~~v~~~~~~ 465 (502)
|+++|||. +..+++...++ .|=.+..++++.++.+ |+..|++..... ..++.+++..++.+ +++.+....
T Consensus 276 R~~~gLp~--d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~-~~~~~l~~~~~~~Gv~~~Ri~f~~~~ 350 (468)
T PF13844_consen 276 RAQYGLPE--DAVVFGSFNNL--FKISPETLDLWARILKAVPNSRLWLLRFPA-SGEARLRRRFAAHGVDPDRIIFSPVA 350 (468)
T ss_dssp TGGGT--S--SSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEEEEEEETST-THHHHHHHHHHHTTS-GGGEEEEE--
T ss_pred HHHcCCCC--CceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcEEEEeeCCH-HHHHHHHHHHHHcCCChhhEEEcCCC
Confidence 56888873 55556665554 5777777888877766 799998876543 24566666666655 567776655
Q ss_pred ChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 466 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 466 ~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
+.++--..+..+|++|=|-.+ +-|.+.+||+.+|+|
T Consensus 351 ~~~ehl~~~~~~DI~LDT~p~-nG~TTt~dALwmGVP 386 (468)
T PF13844_consen 351 PREEHLRRYQLADICLDTFPY-NGGTTTLDALWMGVP 386 (468)
T ss_dssp -HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT--
T ss_pred CHHHHHHHhhhCCEEeeCCCC-CCcHHHHHHHHcCCC
Confidence 544444577889999998655 557899999999998
No 135
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=94.74 E-value=0.089 Score=52.36 Aligned_cols=43 Identities=16% Similarity=0.317 Sum_probs=38.6
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecC
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~ 128 (502)
|+|++|+---+|+ ..||++.-+.+|.+.|-+.-..|..++++.
T Consensus 1 ~~V~ll~EGtYPy-v~GGVSsW~~~LI~glpe~~F~v~~i~a~~ 43 (268)
T PF11997_consen 1 MDVCLLTEGTYPY-VRGGVSSWVHQLIRGLPEHEFHVYAIGANP 43 (268)
T ss_pred CeEEEEecCcCCC-CCCchhHHHHHHHhcCCCceEEEEEEeCCc
Confidence 8999999999997 889999999999999998888888887764
No 136
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=94.65 E-value=0.52 Score=48.71 Aligned_cols=85 Identities=20% Similarity=0.120 Sum_probs=55.6
Q ss_pred EEEEEcCcc-c-ccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCEEE
Q 010752 404 VIGFIGRLE-E-QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 481 (502)
Q Consensus 404 ~i~~iGrl~-~-~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi~l 481 (502)
+.++.|+-. + .+-...+++++.+|.+...++++.|... . +.+++...+.. .+.+. . ...++|+.||+.+
T Consensus 170 I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~--~-~~i~~~~~~~~-~~~~~---~--~~~~~m~~aDlal 240 (347)
T PRK14089 170 IAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFK--G-KDLKEIYGDIS-EFEIS---Y--DTHKALLEAEFAF 240 (347)
T ss_pred EEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCc--H-HHHHHHHhcCC-CcEEe---c--cHHHHHHhhhHHH
Confidence 445556543 3 4556677799988876556777777653 2 34444333322 22222 1 3467999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCC
Q 010752 482 IPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 482 ~PS~~E~fglv~lEAma~G~P 502 (502)
..| |.+.||++.+|+|
T Consensus 241 ~~S-----GT~TLE~al~g~P 256 (347)
T PRK14089 241 ICS-----GTATLEAALIGTP 256 (347)
T ss_pred hcC-----cHHHHHHHHhCCC
Confidence 876 6888899999998
No 137
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=94.21 E-value=2.1 Score=45.23 Aligned_cols=83 Identities=16% Similarity=0.152 Sum_probs=51.1
Q ss_pred EEEEEcCcccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCEEEEc
Q 010752 404 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIP 483 (502)
Q Consensus 404 ~i~~iGrl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi~l~P 483 (502)
+.+..|..... .+.+-.+++.+.+-++++++...+.+ . .....++++.....++.. +++..||+++..
T Consensus 240 vyvslGt~~~~--~~l~~~~~~a~~~l~~~vi~~~~~~~---~----~~~~~p~n~~v~~~~p~~---~~l~~ad~vI~h 307 (406)
T COG1819 240 VYVSLGTVGNA--VELLAIVLEALADLDVRVIVSLGGAR---D----TLVNVPDNVIVADYVPQL---ELLPRADAVIHH 307 (406)
T ss_pred EEEEcCCcccH--HHHHHHHHHHHhcCCcEEEEeccccc---c----ccccCCCceEEecCCCHH---HHhhhcCEEEec
Confidence 44555666554 33333333334345888888664311 1 112356666666665543 489999999977
Q ss_pred CCCCCCcHHHHHHHHcCCC
Q 010752 484 SRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 484 S~~E~fglv~lEAma~G~P 502 (502)
.-. .+..||+..|+|
T Consensus 308 GG~----gtt~eaL~~gvP 322 (406)
T COG1819 308 GGA----GTTSEALYAGVP 322 (406)
T ss_pred CCc----chHHHHHHcCCC
Confidence 544 788999999998
No 138
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=93.59 E-value=0.46 Score=51.33 Aligned_cols=107 Identities=17% Similarity=0.120 Sum_probs=77.9
Q ss_pred HHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc--CCeEEEEEeCCC-hhhHHHHHHHHHHCC---CceEEEee
Q 010752 391 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK-KPMEKQLEQLEILYP---EKARGVAK 464 (502)
Q Consensus 391 ~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~--~~v~lvivG~g~-~~~~~~l~~l~~~~~---~~v~~~~~ 464 (502)
|..+|+|. +..+++..++ ..|-...+++-.-++.+ |+-.|++.|.|+ +.....++++.++.+ +++++..+
T Consensus 421 R~~lglp~--~avVf~c~~n--~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~ 496 (620)
T COG3914 421 RAQLGLPE--DAVVFCCFNN--YFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPP 496 (620)
T ss_pred hhhcCCCC--CeEEEEecCC--cccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCC
Confidence 57788873 4434444443 45554444444444433 788899888765 456778899988876 67889888
Q ss_pred cChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 465 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 465 ~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
-+.+...+-+.-||++|=+--| +-+.+.+||+.+|+|
T Consensus 497 ~~~~~h~a~~~iADlvLDTyPY-~g~TTa~daLwm~vP 533 (620)
T COG3914 497 APNEDHRARYGIADLVLDTYPY-GGHTTASDALWMGVP 533 (620)
T ss_pred CCCHHHHHhhchhheeeecccC-CCccchHHHHHhcCc
Confidence 8888777999999999987666 556789999999998
No 139
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=93.57 E-value=1.8 Score=44.00 Aligned_cols=110 Identities=14% Similarity=-0.004 Sum_probs=64.6
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCccc--ccCHH---HHHHHHhhccc-CCeEEEEEeCC--ChhhHHHHHHHHHHCCCc
Q 010752 387 KEALQAEVGLPVDRNIPVIGFIGRLEE--QKGSD---ILAAAIPHFIK-ENVQIIVLGTG--KKPMEKQLEQLEILYPEK 458 (502)
Q Consensus 387 k~~l~~~~gl~~~~~~p~i~~iGrl~~--~KG~d---~ll~Al~~L~~-~~v~lvivG~g--~~~~~~~l~~l~~~~~~~ 458 (502)
+++++.+++- .+...+.+.||.-.. .=+.+ .+++.+..+.+ ....+.|..+. +++.++.++++.... ..
T Consensus 134 ~~~~~~~~~~--l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~~~~vttSRRTp~~~~~~L~~~~~~~-~~ 210 (311)
T PF06258_consen 134 AAAWAPRLAA--LPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGGSLLVTTSRRTPPEAEAALRELLKDN-PG 210 (311)
T ss_pred HHhhhhhhcc--CCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCCeEEEEcCCCCcHHHHHHHHHhhcCC-Cc
Confidence 4455555542 234446678886443 23333 56666666655 35688888764 233455555544332 23
Q ss_pred eEEEeecChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 459 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 459 v~~~~~~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
+.+...-...-...+|+.||.++++.-. -.-+-||.+.|+|
T Consensus 211 ~~~~~~~~~nPy~~~La~ad~i~VT~DS---vSMvsEA~~tG~p 251 (311)
T PF06258_consen 211 VYIWDGTGENPYLGFLAAADAIVVTEDS---VSMVSEAAATGKP 251 (311)
T ss_pred eEEecCCCCCcHHHHHHhCCEEEEcCcc---HHHHHHHHHcCCC
Confidence 4333222233355799999999998543 3457899999987
No 140
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=93.50 E-value=12 Score=39.82 Aligned_cols=80 Identities=18% Similarity=0.191 Sum_probs=47.6
Q ss_pred HHHHHHHhhcccCCeEEEEEeCC------ChhhHHHHHHHHHHCCC--ceEE-EeecChHHHHHHHHhcCEEEEcCCCCC
Q 010752 418 DILAAAIPHFIKENVQIIVLGTG------KKPMEKQLEQLEILYPE--KARG-VAKFNIPLAHMIIAGADFILIPSRFEP 488 (502)
Q Consensus 418 d~ll~Al~~L~~~~v~lvivG~g------~~~~~~~l~~l~~~~~~--~v~~-~~~~~~~~~~~ila~ADi~l~PS~~E~ 488 (502)
..+.+++..|.+.+.+++++-.. .+......+++.+.++. +++. ...++..++..+++.+|+++-.-.+
T Consensus 260 ~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig~RlH-- 337 (426)
T PRK10017 260 KAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVSDPARYHVVMDELNDLEMGKILGACELTVGTRLH-- 337 (426)
T ss_pred HHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhcccccceeEecCCCChHHHHHHHhhCCEEEEecch--
Confidence 34566666666667666665532 11223334566665543 2232 2235666777899999998866554
Q ss_pred CcHHHHHHHHcCCC
Q 010752 489 CGLIQLHAMRYGTV 502 (502)
Q Consensus 489 fglv~lEAma~G~P 502 (502)
..+=|++.|+|
T Consensus 338 ---a~I~a~~~gvP 348 (426)
T PRK10017 338 ---SAIISMNFGTP 348 (426)
T ss_pred ---HHHHHHHcCCC
Confidence 45567777776
No 141
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=92.04 E-value=14 Score=38.55 Aligned_cols=149 Identities=19% Similarity=0.149 Sum_probs=88.4
Q ss_pred hcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCC-cCCCCCCCcccccccccCcchhccchHHHHHHHHHH-
Q 010752 316 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE- 393 (502)
Q Consensus 316 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGv-d~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l~~~- 393 (502)
-||.-++.++..++.+.+ -|++.+ +|+++-|-+ |.-.+.-. +..........
T Consensus 145 ~S~~hfapte~ar~nLl~---EG~~~~------~IfvtGnt~iDal~~~~~-----------------~~~~~~~~~~~~ 198 (383)
T COG0381 145 LSDLHFAPTEIARKNLLR---EGVPEK------RIFVTGNTVIDALLNTRD-----------------RVLEDSKILAKG 198 (383)
T ss_pred hhhhhcCChHHHHHHHHH---cCCCcc------ceEEeCChHHHHHHHHHh-----------------hhccchhhHHhh
Confidence 488889999999999985 566655 788887744 22111100 00001111112
Q ss_pred hCCCCCCCCcE-EEEEcCccc-ccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHH-HHCC--CceEEEeecC
Q 010752 394 VGLPVDRNIPV-IGFIGRLEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLE-ILYP--EKARGVAKFN 466 (502)
Q Consensus 394 ~gl~~~~~~p~-i~~iGrl~~-~KG~d~ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~-~~~~--~~v~~~~~~~ 466 (502)
++ +.+..+ ++..=|.+- .++...+++++.++.+ ++++++.-=--. ..++++. ..++ .++.....+.
T Consensus 199 ~~---~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~----~~v~e~~~~~L~~~~~v~li~pl~ 271 (383)
T COG0381 199 LD---DKDKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPR----PRVRELVLKRLKNVERVKLIDPLG 271 (383)
T ss_pred hc---cccCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCC----hhhhHHHHHHhCCCCcEEEeCCcc
Confidence 22 123334 444455553 3889999999988877 466666533222 2233333 2333 3577777787
Q ss_pred hHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 467 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 467 ~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
....+.++..|-+.+--| |-.+=||-..|+|
T Consensus 272 ~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg~P 302 (383)
T COG0381 272 YLDFHNLMKNAFLILTDS-----GGIQEEAPSLGKP 302 (383)
T ss_pred hHHHHHHHHhceEEEecC-----CchhhhHHhcCCc
Confidence 788888999996655433 5677888888876
No 142
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=91.98 E-value=1.1 Score=41.14 Aligned_cols=26 Identities=19% Similarity=0.151 Sum_probs=19.8
Q ss_pred hHHHHHHHHHhcCccccCCHHHHHHHHc
Q 010752 306 KINWMKAGILESDMVLTVSPHYAQELVS 333 (502)
Q Consensus 306 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~ 333 (502)
.++++. ...||+|++.|.+..+.+.+
T Consensus 111 ~~ni~s--aLaAD~v~FNS~~nr~sFL~ 136 (168)
T PF12038_consen 111 MNNIYS--ALAADRVVFNSAFNRDSFLD 136 (168)
T ss_pred HHHHHH--HHhceeeeecchhhHHHHHH
Confidence 445543 34799999999999998775
No 143
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=91.74 E-value=0.68 Score=42.51 Aligned_cols=26 Identities=19% Similarity=0.331 Sum_probs=22.7
Q ss_pred HhcCccccCCHHHHHHHHcCCCCCCcchh
Q 010752 315 LESDMVLTVSPHYAQELVSGEDKGVELDN 343 (502)
Q Consensus 315 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~ 343 (502)
..+|..++.|+..++++.+ +|++.++
T Consensus 136 ~~~D~y~Vase~~~~~l~~---~Gi~~~~ 161 (169)
T PF06925_consen 136 PGVDRYFVASEEVKEELIE---RGIPPER 161 (169)
T ss_pred CCCCEEEECCHHHHHHHHH---cCCChhH
Confidence 4699999999999999995 8888873
No 144
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=90.97 E-value=0.89 Score=37.01 Aligned_cols=35 Identities=20% Similarity=0.237 Sum_probs=25.0
Q ss_pred CCCEEEEEcCCccchH-HHHHHHhccCCCCcCCCeEEEEEecC
Q 010752 227 GEDVVFVANDWHTSLI-PCYLKTMYKPKGMYKSAKVVFCIHNI 268 (502)
Q Consensus 227 ~pDvVih~h~~~t~~~-~~~lk~~~~~~~~~~~~pvv~tiH~~ 268 (502)
+.| |||.|...+.+. -+.+.... .+.|+|||-|+.
T Consensus 50 ~I~-IVHgH~a~S~l~hE~i~hA~~------mGlktVfTDHSL 85 (90)
T PF08288_consen 50 RID-IVHGHQAFSTLCHEAILHART------MGLKTVFTDHSL 85 (90)
T ss_pred Cee-EEEeehhhhHHHHHHHHHHHh------CCCcEEeecccc
Confidence 578 999998777654 23333333 699999999964
No 145
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=90.36 E-value=6.7 Score=44.50 Aligned_cols=222 Identities=19% Similarity=0.253 Sum_probs=128.2
Q ss_pred CCEEEEEcCCccchHHHHHHHhccCCCCcCCCeEEEEEecCcccccccccc-ccccCCCcccccccccccCCCCCcccch
Q 010752 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (502)
Q Consensus 228 pDvVih~h~~~t~~~~~~lk~~~~~~~~~~~~pvv~tiH~~~~~g~~~~~~-~~~l~lp~~~~~~~~~~~~~~~~~~~~~ 306 (502)
.| +|..||++..++|.+++... .++++-+-.|... +.+. +..+ | .
T Consensus 141 ~d-~vwihdyhlmllp~~lr~~~------~~~~ig~flhspf-----pssEi~r~l--p--------------------~ 186 (732)
T KOG1050|consen 141 GD-IVWIHDYHLMLLPQMLRERF------NSAKIGFFLHSPF-----PSSEIYRCL--P--------------------V 186 (732)
T ss_pred CC-cEEEEcchhhccchhhhccc------ccceEEEeccCCC-----ChHHHHHhc--c--------------------c
Confidence 46 99999999999999999765 5677777777432 1111 0111 0 1
Q ss_pred HHHHHHHHHhcCccccCCHHHHHHHHcCC--CCCCcch-----hhh----ccccEEEeeCCCcCCCCCCCcccccccccC
Q 010752 307 INWMKAGILESDMVLTVSPHYAQELVSGE--DKGVELD-----NII----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYD 375 (502)
Q Consensus 307 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~--~~g~~~~-----~~~----~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~ 375 (502)
..-+-.++..+|.+-...+.++..+.+.- ..|.+.. .++ +...+..+|-|+|+..+.-....
T Consensus 187 r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid~~r~v~~~~~------- 259 (732)
T KOG1050|consen 187 RKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGIDVQRFVKLLEL------- 259 (732)
T ss_pred HHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccceeeeeecccccchHHhhccccc-------
Confidence 12222346677777777777766544310 1111111 001 11245567778887766432210
Q ss_pred cchhccchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc------CCeEEEEEeCCC----hhh-
Q 010752 376 ASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----KPM- 444 (502)
Q Consensus 376 ~~~~~~~k~~~k~~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~------~~v~lvivG~g~----~~~- 444 (502)
.--....++++..+ .+..+|+-+-|+...||...=+.|+.++.+ ..+.++.+..+. +++
T Consensus 260 -----~~~~~~~~ei~~~~-----~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~ 329 (732)
T KOG1050|consen 260 -----PYVGSKGMEIKEPF-----KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVE 329 (732)
T ss_pred -----hhHHHHHHHHhhhc-----cCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHH
Confidence 00112234555544 256688889999999999888888888766 245555544322 112
Q ss_pred --HHHHHHHHH----HCCC----ceEEEe-ecChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcC
Q 010752 445 --EKQLEQLEI----LYPE----KARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYG 500 (502)
Q Consensus 445 --~~~l~~l~~----~~~~----~v~~~~-~~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G 500 (502)
+..+..+.. ++.. .++.+. .++..+.-+.++-+|+.++.|..++-.++.+|.-+|.
T Consensus 330 ~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~ 396 (732)
T KOG1050|consen 330 ELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQ 396 (732)
T ss_pred HHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhh
Confidence 222222222 2221 122222 2345667789999999999999999999999987763
No 146
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=88.86 E-value=29 Score=35.25 Aligned_cols=100 Identities=15% Similarity=0.138 Sum_probs=72.7
Q ss_pred CcEEEEEcCcc-cccCHHHHHHHHhhcccCCeEEEE-EeC--CChhhHHHHHHHHHHC-C-CceEEEeec-ChHHHHHHH
Q 010752 402 IPVIGFIGRLE-EQKGSDILAAAIPHFIKENVQIIV-LGT--GKKPMEKQLEQLEILY-P-EKARGVAKF-NIPLAHMII 474 (502)
Q Consensus 402 ~p~i~~iGrl~-~~KG~d~ll~Al~~L~~~~v~lvi-vG~--g~~~~~~~l~~l~~~~-~-~~v~~~~~~-~~~~~~~il 474 (502)
.++-+.+|.=. +..+...+++++.+....++++++ +|- |++.|.+++++...++ + +++.....+ +-++.-.++
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L~~l~~~~~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL 224 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEALRALHQQFGDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALL 224 (322)
T ss_pred CceEEEEeCCCCCcccHHHHHHHHHHHhCCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHH
Confidence 34555666644 677788899999888778998887 665 6777777777776654 4 577655544 445666899
Q ss_pred HhcCEEEEcC-CCCCCcHHHHHHHHcCCC
Q 010752 475 AGADFILIPS-RFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 475 a~ADi~l~PS-~~E~fglv~lEAma~G~P 502 (502)
+.+|+.++-= +.++.|.+++ .++.|+|
T Consensus 225 ~~~Dl~~f~~~RQQgiGnl~l-Li~~G~~ 252 (322)
T PRK02797 225 RQCDLGYFIFARQQGIGTLCL-LIQLGKP 252 (322)
T ss_pred HhCCEEEEeechhhHHhHHHH-HHHCCCc
Confidence 9999999985 4599998876 3677765
No 147
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=87.97 E-value=35 Score=35.20 Aligned_cols=91 Identities=19% Similarity=0.196 Sum_probs=50.8
Q ss_pred CcEEEEEcCcccccCHHH---HHHHHhhcccCC-eEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeecChHHHHHHHH
Q 010752 402 IPVIGFIGRLEEQKGSDI---LAAAIPHFIKEN-VQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIA 475 (502)
Q Consensus 402 ~p~i~~iGrl~~~KG~d~---ll~Al~~L~~~~-v~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~ila 475 (502)
.-+++.+|.=. -|-++ .++|...+.+-+ .-+++.|..- .+++.+++....+ +++.... |.. ++.++++
T Consensus 220 ~~Ilvs~GGG~--dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~M--P~~~r~~l~~~A~~~p~i~I~~-f~~-~~~~ll~ 293 (400)
T COG4671 220 FDILVSVGGGA--DGAELIETALAAAQLLAGLNHKWLIVTGPFM--PEAQRQKLLASAPKRPHISIFE-FRN-DFESLLA 293 (400)
T ss_pred ceEEEecCCCh--hhHHHHHHHHHHhhhCCCCCcceEEEeCCCC--CHHHHHHHHHhcccCCCeEEEE-hhh-hHHHHHH
Confidence 34677776543 35444 444444443322 2355566543 2345555555444 3455443 333 3456999
Q ss_pred hcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 476 GADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 476 ~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
+|+..|-=+-| +++-|=++.|+|
T Consensus 294 gA~~vVSm~GY----NTvCeILs~~k~ 316 (400)
T COG4671 294 GARLVVSMGGY----NTVCEILSFGKP 316 (400)
T ss_pred hhheeeecccc----hhhhHHHhCCCc
Confidence 99999976666 556666777765
No 148
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=87.94 E-value=3.6 Score=41.96 Aligned_cols=93 Identities=23% Similarity=0.258 Sum_probs=58.4
Q ss_pred HHHHHHHhCCCCCCCCcEE-EEEcC-cccccCHH--HHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceE-E
Q 010752 387 KEALQAEVGLPVDRNIPVI-GFIGR-LEEQKGSD--ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKAR-G 461 (502)
Q Consensus 387 k~~l~~~~gl~~~~~~p~i-~~iGr-l~~~KG~d--~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~-~ 461 (502)
++.+..+++++ .+.|+| +..|. ..+.|.+. .+.+.+..|.+.+.+++++|+.. .++..+++.+..+..+. .
T Consensus 161 ~~~~~~~~~~~--~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~--e~~~~~~i~~~~~~~~~~l 236 (334)
T TIGR02195 161 QAAALAKFGLD--TERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAK--DHPAGNEIEALLPGELRNL 236 (334)
T ss_pred HHHHHHHcCCC--CCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChh--hHHHHHHHHHhCCcccccC
Confidence 34455666654 244554 45554 34666644 67777777766678999998764 23445566555554333 3
Q ss_pred EeecChHHHHHHHHhcCEEEEc
Q 010752 462 VAKFNIPLAHMIIAGADFILIP 483 (502)
Q Consensus 462 ~~~~~~~~~~~ila~ADi~l~P 483 (502)
.+..+=.++..+++.||++|-.
T Consensus 237 ~g~~sL~el~ali~~a~l~I~~ 258 (334)
T TIGR02195 237 AGETSLDEAVDLIALAKAVVTN 258 (334)
T ss_pred CCCCCHHHHHHHHHhCCEEEee
Confidence 3455556777899999999965
No 149
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=87.59 E-value=33 Score=34.38 Aligned_cols=88 Identities=16% Similarity=0.254 Sum_probs=55.4
Q ss_pred cEEEEEcCcccccCHHHHHHHHhhcccCCeEEE-EEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCEEE
Q 010752 403 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 481 (502)
Q Consensus 403 p~i~~iGrl~~~KG~d~ll~Al~~L~~~~v~lv-ivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi~l 481 (502)
-+++..|--++ |++ .++.++.|...++.+- ++|++.+.+.+ ++...++++ ++..+ .+.+.+..+|..||..+
T Consensus 160 ~ilI~lGGsDp-k~l--t~kvl~~L~~~~~nl~iV~gs~~p~l~~-l~k~~~~~~-~i~~~--~~~~dma~LMke~d~aI 232 (318)
T COG3980 160 DILITLGGSDP-KNL--TLKVLAELEQKNVNLHIVVGSSNPTLKN-LRKRAEKYP-NINLY--IDTNDMAELMKEADLAI 232 (318)
T ss_pred eEEEEccCCCh-hhh--HHHHHHHhhccCeeEEEEecCCCcchhH-HHHHHhhCC-CeeeE--ecchhHHHHHHhcchhe
Confidence 36677776655 443 4455555544455554 46766654433 444444554 34433 34566788999999998
Q ss_pred EcCCCCCCcHHHHHHHHcCCC
Q 010752 482 IPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 482 ~PS~~E~fglv~lEAma~G~P 502 (502)
.. -|.++.||...|+|
T Consensus 233 ~A-----aGstlyEa~~lgvP 248 (318)
T COG3980 233 SA-----AGSTLYEALLLGVP 248 (318)
T ss_pred ec-----cchHHHHHHHhcCC
Confidence 75 37899999999988
No 150
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=87.40 E-value=3.2 Score=43.27 Aligned_cols=84 Identities=14% Similarity=0.127 Sum_probs=49.8
Q ss_pred cEEEEEcCcccccC--HHHHHHHHhhcccCCeEEE-EEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCE
Q 010752 403 PVIGFIGRLEEQKG--SDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (502)
Q Consensus 403 p~i~~iGrl~~~KG--~d~ll~Al~~L~~~~v~lv-ivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi 479 (502)
++++..|.....+. ++.+++++.+ .+++++ ..|.+.. .+.++ ..++++......+. ..+|+.||+
T Consensus 227 ~v~vs~Gs~~~~~~~~~~~~~~al~~---~~~~~i~~~g~~~~--~~~~~----~~~~~v~~~~~~p~---~~ll~~~~~ 294 (392)
T TIGR01426 227 VVLISLGTVFNNQPSFYRTCVEAFRD---LDWHVVLSVGRGVD--PADLG----ELPPNVEVRQWVPQ---LEILKKADA 294 (392)
T ss_pred EEEEecCccCCCCHHHHHHHHHHHhc---CCCeEEEEECCCCC--hhHhc----cCCCCeEEeCCCCH---HHHHhhCCE
Confidence 35667788643221 2334444443 355555 4555432 12222 24566766655553 268999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCC
Q 010752 480 ILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 480 ~l~PS~~E~fglv~lEAma~G~P 502 (502)
+|..+-+ .+++|||++|+|
T Consensus 295 ~I~hgG~----~t~~Eal~~G~P 313 (392)
T TIGR01426 295 FITHGGM----NSTMEALFNGVP 313 (392)
T ss_pred EEECCCc----hHHHHHHHhCCC
Confidence 9976543 578999999998
No 151
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=85.78 E-value=0.82 Score=43.31 Aligned_cols=39 Identities=31% Similarity=0.438 Sum_probs=29.6
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCC
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~ 130 (502)
||||..+.+-. .+.-+..|.++|.+.||+|.|++|...+
T Consensus 1 M~ILlTNDDGi-------~a~Gi~aL~~~L~~~g~~V~VvAP~~~~ 39 (196)
T PF01975_consen 1 MRILLTNDDGI-------DAPGIRALAKALSALGHDVVVVAPDSEQ 39 (196)
T ss_dssp SEEEEE-SS-T-------TSHHHHHHHHHHTTTSSEEEEEEESSST
T ss_pred CeEEEEcCCCC-------CCHHHHHHHHHHHhcCCeEEEEeCCCCC
Confidence 89999998622 2334788999998889999999997543
No 152
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=84.51 E-value=2.2 Score=35.33 Aligned_cols=68 Identities=15% Similarity=0.209 Sum_probs=43.9
Q ss_pred EEEEeCCChhhHHHHHHHHHHCCCceEEE---eecChHH--HHHHHHhcCEEEEcCCC---CCCcHHHHHHHHcCCC
Q 010752 434 IIVLGTGKKPMEKQLEQLEILYPEKARGV---AKFNIPL--AHMIIAGADFILIPSRF---EPCGLIQLHAMRYGTV 502 (502)
Q Consensus 434 lvivG~g~~~~~~~l~~l~~~~~~~v~~~---~~~~~~~--~~~ila~ADi~l~PS~~---E~fglv~lEAma~G~P 502 (502)
++|+|.-+ .+...++++.++++.+...+ ..+.... +...+..||++|++..+ +..-.+--+|-.+|+|
T Consensus 2 vliVGG~~-~~~~~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip 77 (97)
T PF10087_consen 2 VLIVGGRE-DRERRYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIP 77 (97)
T ss_pred EEEEcCCc-ccHHHHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCc
Confidence 56677522 26677888888888766666 4444443 77788899999998664 3344455555555554
No 153
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=83.92 E-value=6.1 Score=39.08 Aligned_cols=92 Identities=16% Similarity=0.215 Sum_probs=59.0
Q ss_pred EEEEEcCcccccC--HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCC-Cce-EEEeecChHHHHHHHHhcCE
Q 010752 404 VIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP-EKA-RGVAKFNIPLAHMIIAGADF 479 (502)
Q Consensus 404 ~i~~iGrl~~~KG--~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~-~~v-~~~~~~~~~~~~~ila~ADi 479 (502)
+++..|.-.+.|. .+.+.+.++.|.+.+++++++|..+ .++..+++.+..+ .++ ...+..+-.+...+++.||+
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~--e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~l 201 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPA--ERELAEEIAAALGGPRVVNLAGKTSLRELAALLARADL 201 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechh--hHHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCCE
Confidence 4445555555555 4678888887776789999998654 3455666665542 223 33444445667789999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCC
Q 010752 480 ILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 480 ~l~PS~~E~fglv~lEAma~G~P 502 (502)
++-+.. |..-+. .+.|+|
T Consensus 202 ~I~~Ds----g~~HlA-~a~~~p 219 (279)
T cd03789 202 VVTNDS----GPMHLA-AALGTP 219 (279)
T ss_pred EEeeCC----HHHHHH-HHcCCC
Confidence 997743 444444 477776
No 154
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6.3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.
Probab=83.48 E-value=1.4 Score=38.29 Aligned_cols=40 Identities=25% Similarity=0.279 Sum_probs=24.9
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
|||+|+-. |+....=-.+....|+.+.+++||+|.++.+.
T Consensus 1 Mki~fvmD---pi~~i~~~kDTT~alm~eAq~RGhev~~~~~~ 40 (119)
T PF02951_consen 1 MKIAFVMD---PIESIKPYKDTTFALMLEAQRRGHEVFYYEPG 40 (119)
T ss_dssp -EEEEEES----GGG--TTT-HHHHHHHHHHHTT-EEEEE-GG
T ss_pred CeEEEEeC---CHHHCCCCCChHHHHHHHHHHCCCEEEEEEcC
Confidence 89999986 32111111234567999999999999999876
No 155
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=82.47 E-value=16 Score=37.51 Aligned_cols=83 Identities=12% Similarity=-0.001 Sum_probs=52.6
Q ss_pred CcEEEEEcCcccccCH--HHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCC-Cce-EEEeecChHHHHHHHHhc
Q 010752 402 IPVIGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP-EKA-RGVAKFNIPLAHMIIAGA 477 (502)
Q Consensus 402 ~p~i~~iGrl~~~KG~--d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~-~~v-~~~~~~~~~~~~~ila~A 477 (502)
..+++..|.-.+.|.+ +.+.+.+..|.+.+.+++++|...+...+..+++.+... .++ ...+..+=.++..+++.|
T Consensus 184 ~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a 263 (352)
T PRK10422 184 NYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALIDHA 263 (352)
T ss_pred CeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHhC
Confidence 3456677776677774 467777777766688999987644322333455544332 223 344555556777899999
Q ss_pred CEEEEcC
Q 010752 478 DFILIPS 484 (502)
Q Consensus 478 Di~l~PS 484 (502)
|++|-..
T Consensus 264 ~l~v~nD 270 (352)
T PRK10422 264 QLFIGVD 270 (352)
T ss_pred CEEEecC
Confidence 9999653
No 156
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=82.02 E-value=66 Score=33.20 Aligned_cols=100 Identities=16% Similarity=0.144 Sum_probs=70.7
Q ss_pred CcEEEEEcCc-ccccCHHHHHHHHhhcccCCeEEEE-EeCC--ChhhHHHHHHHHHHC-C-CceEEEe-ecChHHHHHHH
Q 010752 402 IPVIGFIGRL-EEQKGSDILAAAIPHFIKENVQIIV-LGTG--KKPMEKQLEQLEILY-P-EKARGVA-KFNIPLAHMII 474 (502)
Q Consensus 402 ~p~i~~iGrl-~~~KG~d~ll~Al~~L~~~~v~lvi-vG~g--~~~~~~~l~~l~~~~-~-~~v~~~~-~~~~~~~~~il 474 (502)
.+.-+.+|.= .+..+...+++++.+....++++++ +|-| ++.+.+++++...++ + +++.... ..+-++.-+++
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL 263 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQFGDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALL 263 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhcCCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHH
Confidence 3455566664 4677788888888876667888887 6655 355777777776654 4 3565544 44556777899
Q ss_pred HhcCEEEEcCCC-CCCcHHHHHHHHcCCC
Q 010752 475 AGADFILIPSRF-EPCGLIQLHAMRYGTV 502 (502)
Q Consensus 475 a~ADi~l~PS~~-E~fglv~lEAma~G~P 502 (502)
+.||+.++.... ++.|.+++ .+++|+|
T Consensus 264 ~~cDl~if~~~RQQgiGnI~l-Ll~~G~~ 291 (360)
T PF07429_consen 264 SRCDLGIFNHNRQQGIGNICL-LLQLGKK 291 (360)
T ss_pred HhCCEEEEeechhhhHhHHHH-HHHcCCe
Confidence 999999999765 99998876 4777765
No 157
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=82.00 E-value=6.2 Score=40.77 Aligned_cols=154 Identities=15% Similarity=0.172 Sum_probs=72.5
Q ss_pred HHHHHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCcccccccccCcchhccchHHHHHHH
Q 010752 311 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 390 (502)
Q Consensus 311 k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~~~~i~~~~~~~~~~~~k~~~k~~l 390 (502)
.......|.+++.|+..++.+.+ .++.+.+ .++.-|..- .|.. .......++.+
T Consensus 129 ~~~~~~~d~~~~~s~~~~~~~~~--~f~~~~~--------~i~~~G~PR------~D~l----------~~~~~~~~~~i 182 (369)
T PF04464_consen 129 KRNYRNYDYFIVSSEFEKEIFKK--AFGYPED--------KILVTGYPR------NDYL----------FNKSKENRNRI 182 (369)
T ss_dssp HHHHTT-SEEEESSHHHHHHHHH--HTT--GG--------GEEES--GG------GHHH----------HHSTT-HHHHH
T ss_pred hhhccCCcEEEECCHHHHHHHHH--HhccCcc--------eEEEeCCCe------EhHH----------hccCHHHHHHH
Confidence 33466799999999999998885 4665554 233445421 1110 11122226778
Q ss_pred HHHhCCCCCCCCcEEEEEcCcccccCH--------HHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEE
Q 010752 391 QAEVGLPVDRNIPVIGFIGRLEEQKGS--------DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV 462 (502)
Q Consensus 391 ~~~~gl~~~~~~p~i~~iGrl~~~KG~--------d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~ 462 (502)
++.+|++ .+..+|+|.=........ ..-++.+..+.+.++.+++-. .+......... ....+++...
T Consensus 183 ~~~~~~~--~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~~~~~~~~li~k~--Hp~~~~~~~~~-~~~~~~i~~~ 257 (369)
T PF04464_consen 183 KKKLGID--KDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNFLLKNNYVLIIKP--HPNMKKKFKDF-KEDNSNIIFV 257 (369)
T ss_dssp HHHTT----SS-EEEEEE----GGG--GGSS----TT-HHHHHHHHTTTEEEEE----SHHHHTT-----TT-TTTEEE-
T ss_pred HHHhccC--CCCcEEEEeeccccccccccccccccccCHHHHHHHhCCCcEEEEEe--Cchhhhchhhh-hccCCcEEEC
Confidence 8888875 466689888544432222 122333334444677776643 22222222221 1223344433
Q ss_pred eecChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 463 AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 463 ~~~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
- +.+...++|..||++|-= ++-++.|++.++.|
T Consensus 258 ~--~~~~~~~ll~~aDiLITD-----ySSi~fD~~~l~KP 290 (369)
T PF04464_consen 258 S--DNEDIYDLLAAADILITD-----YSSIIFDFLLLNKP 290 (369)
T ss_dssp T--T-S-HHHHHHT-SEEEES-----S-THHHHHGGGT--
T ss_pred C--CCCCHHHHHHhcCEEEEe-----chhHHHHHHHhCCC
Confidence 2 233677899999998832 35688888888876
No 158
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=79.94 E-value=27 Score=35.64 Aligned_cols=80 Identities=11% Similarity=0.056 Sum_probs=50.9
Q ss_pred EEEEEcCcccccC--HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCC-ceE-EEeecChHHHHHHHHhcCE
Q 010752 404 VIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KAR-GVAKFNIPLAHMIIAGADF 479 (502)
Q Consensus 404 ~i~~iGrl~~~KG--~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~-~v~-~~~~~~~~~~~~ila~ADi 479 (502)
+++..|.-.+.|. .+...+.+..|.+.+.+++++|...+...+..+++.+..+. ++. ..++.+=.++..+++.||+
T Consensus 184 i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a~l 263 (344)
T TIGR02201 184 IVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALIDHARL 263 (344)
T ss_pred EEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHHHhCCE
Confidence 4566666556565 45667777777666789999986543233345555554432 233 4455555677789999999
Q ss_pred EEEc
Q 010752 480 ILIP 483 (502)
Q Consensus 480 ~l~P 483 (502)
+|-.
T Consensus 264 ~Vs~ 267 (344)
T TIGR02201 264 FIGV 267 (344)
T ss_pred EEec
Confidence 9966
No 159
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=79.80 E-value=70 Score=32.05 Aligned_cols=96 Identities=18% Similarity=0.185 Sum_probs=53.9
Q ss_pred EEEcCcccccCHHHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHH-------------HHH-CC-CceEEEeecChHH
Q 010752 406 GFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQL-------------EIL-YP-EKARGVAKFNIPL 469 (502)
Q Consensus 406 ~~iGrl~~~KG~d~ll~Al~~L~~-~~v~lvivG~g~~~~~~~l~~l-------------~~~-~~-~~v~~~~~~~~~~ 469 (502)
.|+||..-.||+..+++--++..+ ++..-++-|-....-.-.+.+- ..+ .| .-+..++.+-.++
T Consensus 187 ~yigR~Tt~kG~~~mfD~h~~~lK~~~~~t~~~GierS~A~~~i~d~~~~~~y~~~~~~~~~~~~pN~~~~v~~~Yi~~E 266 (355)
T PF11440_consen 187 RYIGRQTTWKGPRRMFDLHEKILKPAGFKTIMEGIERSPAKISIKDHGIPYEYYPKLDCDEPKPAPNSPVPVYGPYIRSE 266 (355)
T ss_dssp EEE--SSGGG-HHHHHHHHHHTTTTTT-EEEEE---SSTHHHHHHHTT--EEEE-CTGGGG---SSS--EEEESS--HHH
T ss_pred eeeeeeeeecCcHHHhhhHHHhcCCcchhHHhhhhhcCCceeeeecCCcccccCccccccCcccCCCCcceecchhhhHH
Confidence 799999999999999999998776 5888888884321100011110 000 11 2245566666677
Q ss_pred HHHHHHhcCEEEEcCC------CCCCcHHHHHHHHcCC
Q 010752 470 AHMIIAGADFILIPSR------FEPCGLIQLHAMRYGT 501 (502)
Q Consensus 470 ~~~ila~ADi~l~PS~------~E~fglv~lEAma~G~ 501 (502)
..+.|+.+-+..--|. .+..-.+++|.-|||+
T Consensus 267 ~~~~Maks~Fgy~~~k~~~~y~~r~mEYt~iE~~A~Gt 304 (355)
T PF11440_consen 267 GLERMAKSLFGYQLSKLQQKYLQRSMEYTQIELIAVGT 304 (355)
T ss_dssp HHHHHHTEEEEEE-----GGG-SS---HHHHHHHHCTS
T ss_pred HHHHHhhccceeecHHHHHHHHHhhhhhheeeeeeece
Confidence 7788998888766554 2447789999999997
No 160
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=78.25 E-value=18 Score=36.18 Aligned_cols=97 Identities=13% Similarity=-0.005 Sum_probs=59.2
Q ss_pred CCcEEEEEcCcc---cccCHHHHHHHHhhcccC-CeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHh
Q 010752 401 NIPVIGFIGRLE---EQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 476 (502)
Q Consensus 401 ~~p~i~~iGrl~---~~KG~d~ll~Al~~L~~~-~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ 476 (502)
+.+.|++.-|-. ..+..+.+.+++..+.+. +.+++++.-..+...+..+++..++++........+.+++..+++.
T Consensus 171 ~~~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~ 250 (298)
T TIGR03609 171 PEPVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLDPEELLGLFAS 250 (298)
T ss_pred CCCeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcchhHHHHHHHHHhcCCCcEEEecCCHHHHHHHHhh
Confidence 345666665532 122355677888877664 7777666543223345566676666543333334455667789999
Q ss_pred cCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 477 ADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 477 ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
||+++-...+ ..+=|+.+|+|
T Consensus 251 ~~~vI~~RlH-----~~I~A~~~gvP 271 (298)
T TIGR03609 251 ARLVIGMRLH-----ALILAAAAGVP 271 (298)
T ss_pred CCEEEEechH-----HHHHHHHcCCC
Confidence 9977766655 55667788877
No 161
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=76.14 E-value=4.1 Score=35.40 Aligned_cols=21 Identities=33% Similarity=0.428 Sum_probs=16.9
Q ss_pred HhhhHHHHHHCCCeEEEEEec
Q 010752 107 LGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 107 v~~La~aLa~~Gh~V~vitp~ 127 (502)
...|+++|+++||||.+.++.
T Consensus 15 ~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 15 FLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp HHHHHHHHHHTT-EEEEEETG
T ss_pred HHHHHHHHhccCCeEEEeecc
Confidence 445899999999999988864
No 162
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=72.80 E-value=17 Score=33.87 Aligned_cols=69 Identities=19% Similarity=0.314 Sum_probs=47.7
Q ss_pred cCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCC-ceEEE-eecChHHHHHHH-----HhcCEEEEc
Q 010752 415 KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KARGV-AKFNIPLAHMII-----AGADFILIP 483 (502)
Q Consensus 415 KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~-~v~~~-~~~~~~~~~~il-----a~ADi~l~P 483 (502)
-|.|++.+.+....+.+.++.++|+.++..++..+.+.+++|+ ++... +.|..++..++. +++|++++-
T Consensus 32 ~G~dl~~~l~~~~~~~~~~vfllG~~~~v~~~~~~~l~~~yP~l~i~g~~g~f~~~~~~~i~~~I~~s~~dil~Vg 107 (177)
T TIGR00696 32 AGPDLMEELCQRAGKEKLPIFLYGGKPDVLQQLKVKLIKEYPKLKIVGAFGPLEPEERKAALAKIARSGAGIVFVG 107 (177)
T ss_pred ChHHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHHcCCCEEEEE
Confidence 3889998988887667789999998887778888888888884 33332 344433222222 368888875
No 163
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=72.56 E-value=22 Score=36.38 Aligned_cols=82 Identities=20% Similarity=0.200 Sum_probs=57.8
Q ss_pred CcE-EEEEc-CcccccCHH--HHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhc
Q 010752 402 IPV-IGFIG-RLEEQKGSD--ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 477 (502)
Q Consensus 402 ~p~-i~~iG-rl~~~KG~d--~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~A 477 (502)
+|+ ++..| .-...|.+. .+.+.+..|.+...++++.|+.+ .++..+++...+++.+...++.+=.++..+++.|
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~~--e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li~~a 252 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGPD--EEERAEEIAKGLPNAVILAGKTSLEELAALIAGA 252 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecChH--HHHHHHHHHHhcCCccccCCCCCHHHHHHHHhcC
Confidence 455 44556 555667644 67777777777778999999873 5677888888877544455555556777899999
Q ss_pred CEEEEcCC
Q 010752 478 DFILIPSR 485 (502)
Q Consensus 478 Di~l~PS~ 485 (502)
|++|-+..
T Consensus 253 ~l~I~~DS 260 (334)
T COG0859 253 DLVIGNDS 260 (334)
T ss_pred CEEEccCC
Confidence 99887643
No 164
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=72.20 E-value=13 Score=35.82 Aligned_cols=82 Identities=13% Similarity=0.072 Sum_probs=48.5
Q ss_pred cEEEEEcCcccccCHH--HHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCc-eEEEeecChHHHHHHHHhcCE
Q 010752 403 PVIGFIGRLEEQKGSD--ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEK-ARGVAKFNIPLAHMIIAGADF 479 (502)
Q Consensus 403 p~i~~iGrl~~~KG~d--~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~-v~~~~~~~~~~~~~ila~ADi 479 (502)
.++++.|.-.+.|.+. ...+.+..|.+...+++++|...+..++.++++....+.+ +...+..+-.++..+++.||+
T Consensus 107 ~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali~~a~~ 186 (247)
T PF01075_consen 107 YIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALISRADL 186 (247)
T ss_dssp EEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHHHTSSE
T ss_pred eEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHHhcCCE
Confidence 3566667666777744 4788888887766889999987643344555555544432 444455555677789999999
Q ss_pred EEEcC
Q 010752 480 ILIPS 484 (502)
Q Consensus 480 ~l~PS 484 (502)
+|-+-
T Consensus 187 ~I~~D 191 (247)
T PF01075_consen 187 VIGND 191 (247)
T ss_dssp EEEES
T ss_pred EEecC
Confidence 99763
No 165
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=70.44 E-value=20 Score=33.06 Aligned_cols=71 Identities=27% Similarity=0.433 Sum_probs=49.5
Q ss_pred ccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEee----cChHHHHHHH-----HhcCEEEE
Q 010752 412 EEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK----FNIPLAHMII-----AGADFILI 482 (502)
Q Consensus 412 ~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~----~~~~~~~~il-----a~ADi~l~ 482 (502)
+.--|.|.+.+.+....+++.++.++|+.++..++..+.+.+.+|+ +...+. |+.++..+++ +.+|++++
T Consensus 29 ~rv~g~dl~~~l~~~~~~~~~~ifllG~~~~~~~~~~~~l~~~yP~-l~ivg~~~g~f~~~~~~~i~~~I~~~~pdiv~v 107 (172)
T PF03808_consen 29 ERVTGSDLFPDLLRRAEQRGKRIFLLGGSEEVLEKAAANLRRRYPG-LRIVGYHHGYFDEEEEEAIINRINASGPDIVFV 107 (172)
T ss_pred cccCHHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHHCCC-eEEEEecCCCCChhhHHHHHHHHHHcCCCEEEE
Confidence 3457888888888877667789999998877777778888888874 444443 3333333333 47788887
Q ss_pred c
Q 010752 483 P 483 (502)
Q Consensus 483 P 483 (502)
-
T Consensus 108 g 108 (172)
T PF03808_consen 108 G 108 (172)
T ss_pred E
Confidence 5
No 166
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=70.39 E-value=48 Score=33.34 Aligned_cols=79 Identities=14% Similarity=0.169 Sum_probs=51.4
Q ss_pred EEEEEcCcccccCH--HHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCEEE
Q 010752 404 VIGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 481 (502)
Q Consensus 404 ~i~~iGrl~~~KG~--d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi~l 481 (502)
++++.|.=.+.|.+ +.+.+.+..|.+.+.+++++|.++. ..+..+++....+. ....+..+=.+...+++.||++|
T Consensus 182 i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~-e~~~~~~i~~~~~~-~~l~g~~sL~el~ali~~a~l~I 259 (319)
T TIGR02193 182 AVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDA-EKQRAERIAEALPG-AVVLPKMSLAEVAALLAGADAVV 259 (319)
T ss_pred EEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHH-HHHHHHHHHhhCCC-CeecCCCCHHHHHHHHHcCCEEE
Confidence 45666654566765 5677777777666788888864442 33445566555553 33445555566778999999999
Q ss_pred EcC
Q 010752 482 IPS 484 (502)
Q Consensus 482 ~PS 484 (502)
-+-
T Consensus 260 ~~D 262 (319)
T TIGR02193 260 GVD 262 (319)
T ss_pred eCC
Confidence 663
No 167
>PF12683 DUF3798: Protein of unknown function (DUF3798); InterPro: IPR024258 This entry represents functionally uncharacterised proteins that are found in bacteria. They are typically between 247 and 417 amino acids in length. Most of the proteins in this entry have an N-terminal lipoprotein attachment site. These proteins have distant similarity to periplasmic ligand binding families suggesting that this family has a similar role.; PDB: 3QI7_A.
Probab=67.75 E-value=62 Score=32.13 Aligned_cols=109 Identities=14% Similarity=0.151 Sum_probs=67.3
Q ss_pred cchHHHH--HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHHCCC
Q 010752 381 DAKPLLK--EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPE 457 (502)
Q Consensus 381 ~~k~~~k--~~l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~-~~v~lvivG~g~~~~~~~l~~l~~~~~~ 457 (502)
+++.+.+ +++.+++|-. ....+.|.-.+ ....+..+.-+..|.+ ++++.+|+-.+.+...+.++++.++.|+
T Consensus 14 q~ed~~r~Ae~l~~~Yg~~---~I~h~tyPdnf--~~e~EttIskI~~lAdDp~mKaIVv~q~vpGt~~af~kIkekRpD 88 (275)
T PF12683_consen 14 QSEDEYRGAEELIKKYGDV---MIKHVTYPDNF--MSEQETTISKIVSLADDPDMKAIVVSQAVPGTAEAFRKIKEKRPD 88 (275)
T ss_dssp T-HHHHHHHHHHHHHHHHH---EEEEEE--TTG--GGCHHHHHHHHHGGGG-TTEEEEEEE-SS---HHHHHHHHHH-TT
T ss_pred cChHHHHHHHHHHHHhCcc---eEEEEeCCCcc--cchHHHHHHHHHHhccCCCccEEEEeCCCcchHHHHHHHHhcCCC
Confidence 4444444 6777888732 12234444443 3458888888888765 8999999999888788889999998886
Q ss_pred ceEEEeecChHHHHHHHHhcCEEEEcCCCCCCcHHHHHH
Q 010752 458 KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHA 496 (502)
Q Consensus 458 ~v~~~~~~~~~~~~~ila~ADi~l~PS~~E~fglv~lEA 496 (502)
+.+....+.+....+-..||+.+.+. ++..|..+.++
T Consensus 89 -Il~ia~~~~EDp~~i~~~aDi~~~~D-~~~~G~~i~~~ 125 (275)
T PF12683_consen 89 -ILLIAGEPHEDPEVISSAADIVVNPD-EISRGYTIVWA 125 (275)
T ss_dssp -SEEEESS--S-HHHHHHHSSEEEE---HHHHHHHHHHH
T ss_pred -eEEEcCCCcCCHHHHhhccCeEeccc-hhhccHHHHHH
Confidence 66666666777777889999999863 34556555543
No 168
>PRK10037 cell division protein; Provisional
Probab=65.44 E-value=7.3 Score=38.02 Aligned_cols=35 Identities=29% Similarity=0.395 Sum_probs=26.9
Q ss_pred ceEEEEeeeccCccccccHHHHH--hhhHHHHHHCCCeEEEEE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVL--GGLPPALAANGHRVMTIA 125 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v--~~La~aLa~~Gh~V~vit 125 (502)
|||+-|.+ ..||+|+-+ .+||.+|+++|++|.++=
T Consensus 1 ~~~iav~n------~KGGvGKTT~a~nLA~~La~~G~rVLlID 37 (250)
T PRK10037 1 MAILGLQG------VRGGVGTTSITAALAWSLQMLGENVLVID 37 (250)
T ss_pred CcEEEEec------CCCCccHHHHHHHHHHHHHhcCCcEEEEe
Confidence 56655554 368887655 679999999999999983
No 169
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=64.17 E-value=9.1 Score=38.77 Aligned_cols=35 Identities=26% Similarity=0.284 Sum_probs=27.6
Q ss_pred cCCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 82 ~~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
+..|||++|+. |++|. .++..|++.||+|++++..
T Consensus 3 ~~~m~I~IiG~--------GaiG~---~lA~~L~~~g~~V~~~~r~ 37 (313)
T PRK06249 3 SETPRIGIIGT--------GAIGG---FYGAMLARAGFDVHFLLRS 37 (313)
T ss_pred CcCcEEEEECC--------CHHHH---HHHHHHHHCCCeEEEEEeC
Confidence 34699999986 77764 4678899999999999764
No 170
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=64.01 E-value=29 Score=31.91 Aligned_cols=71 Identities=27% Similarity=0.447 Sum_probs=48.0
Q ss_pred ccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEe----ecChHHHHHH-----HHhcCEEEE
Q 010752 412 EEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA----KFNIPLAHMI-----IAGADFILI 482 (502)
Q Consensus 412 ~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~----~~~~~~~~~i-----la~ADi~l~ 482 (502)
+.--|.|.+.+.+....+.+.++.++|+.++..++..+.+.+++|+ +...+ .|..++..++ -..+|++++
T Consensus 27 ~r~~g~dl~~~ll~~~~~~~~~v~llG~~~~~~~~~~~~l~~~yp~-l~i~g~~~g~~~~~~~~~i~~~I~~~~pdiv~v 105 (171)
T cd06533 27 ERVTGSDLMPALLELAAQKGLRVFLLGAKPEVLEKAAERLRARYPG-LKIVGYHHGYFGPEEEEEIIERINASGADILFV 105 (171)
T ss_pred cccCcHHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHHHHHHCCC-cEEEEecCCCCChhhHHHHHHHHHHcCCCEEEE
Confidence 4457899999999888777889999998877777777778888884 33333 3332222211 236788887
Q ss_pred c
Q 010752 483 P 483 (502)
Q Consensus 483 P 483 (502)
-
T Consensus 106 g 106 (171)
T cd06533 106 G 106 (171)
T ss_pred E
Confidence 5
No 171
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=63.47 E-value=26 Score=34.31 Aligned_cols=69 Identities=16% Similarity=0.281 Sum_probs=45.6
Q ss_pred cCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEE--EeecChHHHHHH-----HHhcCEEEEc
Q 010752 415 KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARG--VAKFNIPLAHMI-----IAGADFILIP 483 (502)
Q Consensus 415 KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~--~~~~~~~~~~~i-----la~ADi~l~P 483 (502)
-|.|++.+.++...+.+.++.++|+.++..++..+.+.++++-++.. .+.|+.++..++ -+++|++++-
T Consensus 89 ~G~dl~~~ll~~~~~~~~~v~llG~~~~v~~~a~~~l~~~y~l~i~g~~~Gyf~~~e~~~i~~~I~~s~~dil~Vg 164 (243)
T PRK03692 89 AGADLWEALMARAGKEGTPVFLVGGKPEVLAQTEAKLRTQWNVNIVGSQDGYFTPEQRQALFERIHASGAKIVTVA 164 (243)
T ss_pred ChHHHHHHHHHHHHhcCCeEEEECCCHHHHHHHHHHHHHHhCCEEEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEE
Confidence 38899888887765567888999988776677777777777533332 244543332222 2378888875
No 172
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=63.43 E-value=97 Score=28.51 Aligned_cols=37 Identities=19% Similarity=0.404 Sum_probs=26.6
Q ss_pred CCCEEEEEcCCccchHHHHHHHhccCCCCcCCCeEEEEE
Q 010752 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCI 265 (502)
Q Consensus 227 ~pDvVih~h~~~t~~~~~~lk~~~~~~~~~~~~pvv~ti 265 (502)
+|| +|.++...++...+++...++.-+. .+.|+||.-
T Consensus 92 rPd-vii~nGpg~~vp~~~~~~l~~~~~~-~~~kiIyIE 128 (170)
T PF08660_consen 92 RPD-VIISNGPGTCVPVCLAAKLLRLLGL-RGSKIIYIE 128 (170)
T ss_pred CCC-EEEEcCCceeeHHHHHHHHHHHhhc-cCCcEEEEE
Confidence 799 8999999988888777766533333 277777654
No 173
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=63.04 E-value=49 Score=33.86 Aligned_cols=91 Identities=18% Similarity=0.167 Sum_probs=52.2
Q ss_pred HHHHHhCCCCCCCCcEE-EEEcCc-ccccC--HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCC----ce-
Q 010752 389 ALQAEVGLPVDRNIPVI-GFIGRL-EEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE----KA- 459 (502)
Q Consensus 389 ~l~~~~gl~~~~~~p~i-~~iGrl-~~~KG--~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~----~v- 459 (502)
.+.+.+++. ++.++| +..|.- .+.|. .+.+.+.+..|.+.+++++++|... .++..+++.+..+. ++
T Consensus 169 ~~~~~~~~~--~~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~--e~~~~~~i~~~~~~~~~~~~~ 244 (348)
T PRK10916 169 ETCAAFSLS--SERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAK--DHEAGNEILAALNTEQQAWCR 244 (348)
T ss_pred HHHHHcCCC--CCCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHH--hHHHHHHHHHhccccccccee
Confidence 344454442 244554 455553 35665 3456677666655678999998654 23344555444432 12
Q ss_pred EEEeecChHHHHHHHHhcCEEEEc
Q 010752 460 RGVAKFNIPLAHMIIAGADFILIP 483 (502)
Q Consensus 460 ~~~~~~~~~~~~~ila~ADi~l~P 483 (502)
...+..+=.++..+++.||++|-.
T Consensus 245 ~l~g~~sL~el~ali~~a~l~I~n 268 (348)
T PRK10916 245 NLAGETQLEQAVILIAACKAIVTN 268 (348)
T ss_pred eccCCCCHHHHHHHHHhCCEEEec
Confidence 233444445667899999999865
No 174
>PRK00207 sulfur transfer complex subunit TusD; Validated
Probab=62.99 E-value=14 Score=32.40 Aligned_cols=38 Identities=16% Similarity=0.152 Sum_probs=28.5
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeE-EEEE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRV-MTIA 125 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V-~vit 125 (502)
|||+++... +|+ .+-.+.-..++|.++.+.||+| .|+-
T Consensus 1 m~~~iv~~~-~Py--~~~~~~~al~~A~aa~~~gh~v~~vFf 39 (128)
T PRK00207 1 MRYAIAVTG-PAY--GTQQASSAYQFAQALLAEGHELVSVFF 39 (128)
T ss_pred CEEEEEEcC-CCC--CCHHHHHHHHHHHHHHhCCCCeeEEEE
Confidence 899999875 675 2334456777999999999995 6654
No 175
>PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B ....
Probab=62.94 E-value=7.6 Score=39.39 Aligned_cols=37 Identities=35% Similarity=0.600 Sum_probs=28.3
Q ss_pred ceEEEEeeeccCccccccHHHHHhh--hHHHHHHCCCeEEEEEecC
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGG--LPPALAANGHRVMTIAPRY 128 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~--La~aLa~~Gh~V~vitp~~ 128 (502)
|||+|++- .||+|+-+-. +|.+++++|++|.+++...
T Consensus 1 ~r~~~~~G-------KGGVGKTT~aaA~A~~~A~~G~rtLlvS~Dp 39 (305)
T PF02374_consen 1 MRILFFGG-------KGGVGKTTVAAALALALARRGKRTLLVSTDP 39 (305)
T ss_dssp -SEEEEEE-------STTSSHHHHHHHHHHHHHHTTS-EEEEESST
T ss_pred CeEEEEec-------CCCCCcHHHHHHHHHHHhhCCCCeeEeecCC
Confidence 78999984 5888877766 7788889999999998654
No 176
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=62.60 E-value=48 Score=30.97 Aligned_cols=39 Identities=15% Similarity=0.091 Sum_probs=27.1
Q ss_pred HHHHHHHHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeC
Q 010752 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 355 (502)
Q Consensus 308 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~N 355 (502)
.+.+..+...|.|.+.|+..++.+.+ .|.+.+ ++.+..|
T Consensus 141 ~~~r~~l~~f~~i~aqs~~da~r~~~---lG~~~~------~v~v~Gn 179 (186)
T PF04413_consen 141 FLFRPLLSRFDRILAQSEADAERFRK---LGAPPE------RVHVTGN 179 (186)
T ss_dssp HHHHHHGGG-SEEEESSHHHHHHHHT---TT-S--------SEEE---
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHH---cCCCcc------eEEEeCc
Confidence 35578888999999999999999995 777766 6777665
No 177
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=61.98 E-value=31 Score=33.94 Aligned_cols=94 Identities=13% Similarity=0.088 Sum_probs=53.7
Q ss_pred CCCCcEEEEEcCcccc-------cCHHHHHHHHhhccc--CCeEEEEEeCCChh----hHHHHHHHHHHCCCceEEEeec
Q 010752 399 DRNIPVIGFIGRLEEQ-------KGSDILAAAIPHFIK--ENVQIIVLGTGKKP----MEKQLEQLEILYPEKARGVAKF 465 (502)
Q Consensus 399 ~~~~p~i~~iGrl~~~-------KG~d~ll~Al~~L~~--~~v~lvivG~g~~~----~~~~l~~l~~~~~~~v~~~~~~ 465 (502)
+.+.++|+++...... .....+++.+..+.+ ++.+++|== .+.. ....+.++.. . .++... .
T Consensus 114 ~~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~-HP~~~~~~~~~~~~~~~~-~-~~~~~~--~ 188 (269)
T PF05159_consen 114 SKNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKP-HPDERGGNKYSYLEELPN-L-PNVVII--D 188 (269)
T ss_pred cCCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEE-CchhhCCCChhHhhhhhc-C-CCeEEE--C
Confidence 3467788888877654 234455555555544 467776522 2210 1122222211 1 222222 2
Q ss_pred ChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 466 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 466 ~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
+.-...+++..||.++.-+. .+.+||+.+|+|
T Consensus 189 ~~~~~~~Ll~~s~~VvtinS-----tvGlEAll~gkp 220 (269)
T PF05159_consen 189 DDVNLYELLEQSDAVVTINS-----TVGLEALLHGKP 220 (269)
T ss_pred CCCCHHHHHHhCCEEEEECC-----HHHHHHHHcCCc
Confidence 23345679999999887654 799999999998
No 178
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=59.84 E-value=1.6e+02 Score=29.90 Aligned_cols=27 Identities=30% Similarity=0.470 Sum_probs=23.6
Q ss_pred ccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 101 GGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 101 GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
-|-+..+..|...|.++||+|-|++-.
T Consensus 62 aGKSTli~~L~~~l~~~G~rVaVlAVD 88 (323)
T COG1703 62 AGKSTLIEALGRELRERGHRVAVLAVD 88 (323)
T ss_pred CchHHHHHHHHHHHHHCCcEEEEEEEC
Confidence 567778899999999999999999854
No 179
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=57.08 E-value=32 Score=28.80 Aligned_cols=33 Identities=9% Similarity=0.271 Sum_probs=26.4
Q ss_pred CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEE
Q 010752 430 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV 462 (502)
Q Consensus 430 ~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~ 462 (502)
++.++|++|+..+...+...++++++|+++..+
T Consensus 63 P~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai 95 (100)
T PF09949_consen 63 PERKFILIGDSGQHDPEIYAEIARRFPGRILAI 95 (100)
T ss_pred CCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEE
Confidence 677999999876555677888999999888655
No 180
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=55.31 E-value=17 Score=34.08 Aligned_cols=35 Identities=23% Similarity=0.418 Sum_probs=27.2
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCC
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~ 129 (502)
|||++|+.. |=+| ..+.++..++||+|+.++....
T Consensus 1 mKIaiIgAs-------G~~G---s~i~~EA~~RGHeVTAivRn~~ 35 (211)
T COG2910 1 MKIAIIGAS-------GKAG---SRILKEALKRGHEVTAIVRNAS 35 (211)
T ss_pred CeEEEEecC-------chhH---HHHHHHHHhCCCeeEEEEeChH
Confidence 899999973 4334 4578889999999999986543
No 181
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=54.16 E-value=95 Score=31.27 Aligned_cols=82 Identities=13% Similarity=0.139 Sum_probs=49.5
Q ss_pred CCcEE-EEEcCcccccCH--HHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhc
Q 010752 401 NIPVI-GFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 477 (502)
Q Consensus 401 ~~p~i-~~iGrl~~~KG~--d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~A 477 (502)
+.+++ +..|.-.+.|.+ +.+.+.+..+.+.+.++++.|.++. .++..+++.+..+ .+...+..+=.++..+++.|
T Consensus 177 ~~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~-e~~~~~~i~~~~~-~~~l~g~~sL~elaali~~a 254 (322)
T PRK10964 177 AGPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEH-EEQRAKRLAEGFP-YVEVLPKLSLEQVARVLAGA 254 (322)
T ss_pred CCCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHH-HHHHHHHHHccCC-cceecCCCCHHHHHHHHHhC
Confidence 34454 344543455653 4677777777666788888643432 3344555544433 34445555656777899999
Q ss_pred CEEEEcC
Q 010752 478 DFILIPS 484 (502)
Q Consensus 478 Di~l~PS 484 (502)
|++|-..
T Consensus 255 ~l~I~nD 261 (322)
T PRK10964 255 KAVVSVD 261 (322)
T ss_pred CEEEecC
Confidence 9999663
No 182
>PRK13849 putative crown gall tumor protein VirC1; Provisional
Probab=53.56 E-value=17 Score=35.17 Aligned_cols=37 Identities=32% Similarity=0.479 Sum_probs=27.8
Q ss_pred ceEEEEeeeccCccccccHHHHH--hhhHHHHHHCCCeEEEEEec
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVL--GGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v--~~La~aLa~~Gh~V~vitp~ 127 (502)
|+|.-|.+ ..||+|+.. ..||.+|+++|.+|.++-..
T Consensus 1 M~iI~v~n------~KGGvGKTT~a~nLA~~la~~G~~VlliD~D 39 (231)
T PRK13849 1 MKLLTFCS------FKGGAGKTTALMGLCAALASDGKRVALFEAD 39 (231)
T ss_pred CeEEEEEC------CCCCccHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 56655554 468888765 55999999999999988543
No 183
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=53.33 E-value=16 Score=36.13 Aligned_cols=39 Identities=23% Similarity=0.300 Sum_probs=29.0
Q ss_pred CCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCC
Q 010752 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (502)
Q Consensus 83 ~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~ 129 (502)
..||||..+.+-.. +.-+..|.++|.+.| +|.|++|...
T Consensus 4 ~~M~ILltNDDGi~-------a~Gi~aL~~~l~~~g-~V~VvAP~~~ 42 (257)
T PRK13932 4 KKPHILVCNDDGIE-------GEGIHVLAASMKKIG-RVTVVAPAEP 42 (257)
T ss_pred CCCEEEEECCCCCC-------CHHHHHHHHHHHhCC-CEEEEcCCCC
Confidence 35999988876322 234677889999888 7999999754
No 184
>CHL00072 chlL photochlorophyllide reductase subunit L
Probab=53.23 E-value=14 Score=37.16 Aligned_cols=34 Identities=29% Similarity=0.549 Sum_probs=26.6
Q ss_pred ceEEEEeeeccCccccccHHHH--HhhhHHHHHHCCCeEEEEEe
Q 010752 85 LNILFVGTEVAPWSKTGGLGDV--LGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~--v~~La~aLa~~Gh~V~vitp 126 (502)
|||++.+ .||+|+- +.+||.+|+++|++|.++=-
T Consensus 1 m~ia~~g--------KGGVGKTTta~nLA~~La~~G~rVLlID~ 36 (290)
T CHL00072 1 MKLAVYG--------KGGIGKSTTSCNISIALARRGKKVLQIGC 36 (290)
T ss_pred CeEEEEC--------CCCCcHHHHHHHHHHHHHHCCCeEEEEec
Confidence 7877766 3777654 56799999999999988843
No 185
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=52.81 E-value=16 Score=35.85 Aligned_cols=37 Identities=27% Similarity=0.368 Sum_probs=28.5
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCC
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~ 129 (502)
||||..+.+ |=.+.-+..|.++|.+.| +|.|++|...
T Consensus 1 M~ILltNDD-------Gi~a~Gi~aL~~~l~~~g-~V~VvAP~~~ 37 (244)
T TIGR00087 1 MKILLTNDD-------GIHSPGIRALYQALKELG-EVTVVAPARQ 37 (244)
T ss_pred CeEEEECCC-------CCCCHhHHHHHHHHHhCC-CEEEEeCCCC
Confidence 899988875 323345778999999998 9999999744
No 186
>PF00551 Formyl_trans_N: Formyl transferase; InterPro: IPR002376 A number of formyl transferases belong to this group. Methionyl-tRNA formyltransferase transfers a formyl group onto the amino terminus of the acyl moiety of the methionyl aminoacyl-tRNA. The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and by impairing its binding to EFTU-GTP. Formyltetrahydrofolate dehydrogenase produces formate from formyl- tetrahydrofolate. This is the N-terminal domain of these enzymes and is found upstream of the C-terminal domain (IPR005793 from INTERPRO). The trifunctional glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide synthetase-glycinamide ribonucleotide transformylase catalyses the second, third and fifth steps in de novo purine biosynthesis. The glycinamide ribonucleotide transformylase belongs to this group.; GO: 0016742 hydroxymethyl-, formyl- and related transferase activity, 0009058 biosynthetic process; PDB: 3P9X_B 3OBI_A 3R8X_A 3KCQ_C 3RFO_D 3AV3_A 3N0V_D 3LOU_A 3O1L_A 4DS3_A ....
Probab=52.69 E-value=55 Score=30.23 Aligned_cols=34 Identities=32% Similarity=0.631 Sum_probs=23.8
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCe--EEEEEec
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHR--VMTIAPR 127 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~--V~vitp~ 127 (502)
|||+|+.+. .| .....+..++.+.+++ +..+.+.
T Consensus 1 mrI~~~~Sg------~~---~~~~~~l~~l~~~~~~~~iv~Vit~ 36 (181)
T PF00551_consen 1 MRIVFFGSG------SG---SFLKALLEALKARGHNVEIVLVITN 36 (181)
T ss_dssp EEEEEEESS------SS---HHHHHHHHHHHTTSSEEEEEEEEES
T ss_pred CEEEEEEcC------CC---HHHHHHHHHHHhCCCCceEEEEecc
Confidence 899999862 12 4567788899999997 4444443
No 187
>PRK09271 flavodoxin; Provisional
Probab=51.94 E-value=26 Score=31.71 Aligned_cols=36 Identities=22% Similarity=0.294 Sum_probs=30.2
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vit 125 (502)
|||++|.. +.+|-.+.+...+++.|.+.|++|.+.-
T Consensus 1 mkv~IvY~-----S~tGnTe~~A~~ia~~l~~~g~~v~~~~ 36 (160)
T PRK09271 1 MRILLAYA-----SLSGNTREVAREIEERCEEAGHEVDWVE 36 (160)
T ss_pred CeEEEEEE-----cCCchHHHHHHHHHHHHHhCCCeeEEEe
Confidence 78888875 3679999999999999999999987653
No 188
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=51.69 E-value=13 Score=33.59 Aligned_cols=39 Identities=13% Similarity=0.100 Sum_probs=26.4
Q ss_pred ceEEEeecChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 458 KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 458 ~v~~~~~~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
++...... +.+..+|+.||+++-- +-+.++.|++++|+|
T Consensus 56 ~v~~~~~~--~~m~~~m~~aDlvIs~----aG~~Ti~E~l~~g~P 94 (167)
T PF04101_consen 56 NVKVFGFV--DNMAELMAAADLVISH----AGAGTIAEALALGKP 94 (167)
T ss_dssp CCEEECSS--SSHHHHHHHHSEEEEC----S-CHHHHHHHHCT--
T ss_pred cEEEEech--hhHHHHHHHcCEEEeC----CCccHHHHHHHcCCC
Confidence 45544443 3478899999988843 334899999999998
No 189
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=51.57 E-value=22 Score=32.42 Aligned_cols=36 Identities=14% Similarity=0.199 Sum_probs=30.8
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vit 125 (502)
||+|++-+. ..|-.......+|..|.+.||+|.+.-
T Consensus 1 Mk~LIlYst-----r~GqT~kIA~~iA~~L~e~g~qvdi~d 36 (175)
T COG4635 1 MKTLILYST-----RDGQTRKIAEYIASHLRESGIQVDIQD 36 (175)
T ss_pred CceEEEEec-----CCCcHHHHHHHHHHHhhhcCCeeeeee
Confidence 788888663 678888899999999999999999873
No 190
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=51.05 E-value=27 Score=30.89 Aligned_cols=40 Identities=18% Similarity=0.246 Sum_probs=30.2
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
|||+.|+...- +.|-....+..+++.+.+.|++|.++-..
T Consensus 1 Mkilii~gS~r---~~~~t~~l~~~~~~~l~~~g~e~~~i~l~ 40 (152)
T PF03358_consen 1 MKILIINGSPR---KNSNTRKLAEAVAEQLEEAGAEVEVIDLA 40 (152)
T ss_dssp -EEEEEESSSS---TTSHHHHHHHHHHHHHHHTTEEEEEEECT
T ss_pred CEEEEEECcCC---CCCHHHHHHHHHHHHHHHcCCEEEEEecc
Confidence 89999987432 34666667777888888889999999654
No 191
>TIGR01380 glut_syn glutathione synthetase, prokaryotic. This model was built using glutathione synthetases found in Gram-negative bacteria. This gene does not appear to be present in genomes of Gram-positive bacteria. Glutathione synthetase has an ATP-binding domain in the COOH terminus and catalyzes the second step in the glutathione biosynthesis pathway: ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione. Glutathione is a tripeptide that functions as a reductant in many cellular reactions.
Probab=51.01 E-value=14 Score=37.53 Aligned_cols=40 Identities=20% Similarity=0.194 Sum_probs=29.7
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
|||+|+-. |+....=-.+....|..+.+++||+|.++.|.
T Consensus 1 m~~~~~~~---~~~~~~~~~~st~~L~~aa~~rG~~v~~~~~~ 40 (312)
T TIGR01380 1 LKVAFQMD---PIESINIGKDTTFALMEEAQKRGHELFFYEPG 40 (312)
T ss_pred CeEEEEeC---CHHHCCCCcChHHHHHHHHHHcCCEEEEEehh
Confidence 89999985 32222222335677999999999999999886
No 192
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=49.75 E-value=29 Score=32.46 Aligned_cols=38 Identities=18% Similarity=0.355 Sum_probs=27.6
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEe
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp 126 (502)
||++.|++.- + --|-......||.+|+++|++|.++-.
T Consensus 17 ~kvI~v~s~k-g---G~GKTt~a~~LA~~la~~G~rVllID~ 54 (204)
T TIGR01007 17 IKVLLITSVK-P---GEGKSTTSANIAVAFAQAGYKTLLIDG 54 (204)
T ss_pred CcEEEEecCC-C---CCCHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 6777776521 1 134556788999999999999988843
No 193
>PRK06756 flavodoxin; Provisional
Probab=49.56 E-value=31 Score=30.59 Aligned_cols=36 Identities=8% Similarity=0.208 Sum_probs=30.5
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vit 125 (502)
|||+.|.. +.+|-.+.+...+++.|.+.|++|.++-
T Consensus 2 mkv~IiY~-----S~tGnTe~vA~~ia~~l~~~g~~v~~~~ 37 (148)
T PRK06756 2 SKLVMIFA-----SMSGNTEEMADHIAGVIRETENEIEVID 37 (148)
T ss_pred ceEEEEEE-----CCCchHHHHHHHHHHHHhhcCCeEEEee
Confidence 78888864 3579999999999999999999998764
No 194
>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein. The BchL peptide (ChlL in chloroplast and cyanobacteria) is an ATP-binding iron-sulfur protein of the dark form protochlorophyllide reductase, an enzyme similar to nitrogenase. This subunit resembles the nitrogenase NifH subunit.
Probab=49.08 E-value=19 Score=35.38 Aligned_cols=33 Identities=33% Similarity=0.573 Sum_probs=25.3
Q ss_pred ceEEEEeeeccCccccccHHHH--HhhhHHHHHHCCCeEEEEE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDV--LGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~--v~~La~aLa~~Gh~V~vit 125 (502)
|+|++.. .||+|+- +.+||.+|+++|++|.++=
T Consensus 1 ~~i~~~g--------KGGVGKTT~~~nLA~~La~~g~rVLliD 35 (268)
T TIGR01281 1 MILAVYG--------KGGIGKSTTSSNLSVAFAKLGKRVLQIG 35 (268)
T ss_pred CEEEEEc--------CCcCcHHHHHHHHHHHHHhCCCeEEEEe
Confidence 5666652 4777755 5679999999999998884
No 195
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=48.16 E-value=24 Score=35.69 Aligned_cols=35 Identities=34% Similarity=0.468 Sum_probs=26.6
Q ss_pred cCCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 82 ~~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
+++|||++|+. |-.| ..++..|++.||+|.++..+
T Consensus 2 ~~~m~I~iiG~--------G~~G---~~lA~~l~~~G~~V~~~~r~ 36 (308)
T PRK14619 2 TQPKTIAILGA--------GAWG---STLAGLASANGHRVRVWSRR 36 (308)
T ss_pred CCCCEEEEECc--------cHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 35799999986 3333 55888999999999887643
No 196
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=47.90 E-value=20 Score=35.78 Aligned_cols=31 Identities=29% Similarity=0.515 Sum_probs=24.5
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEe
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp 126 (502)
|||++++. |.+| ..++..|++.||+|.+++.
T Consensus 1 mkI~IiG~--------G~iG---~~~a~~L~~~g~~V~~~~r 31 (305)
T PRK12921 1 MRIAVVGA--------GAVG---GTFGGRLLEAGRDVTFLVR 31 (305)
T ss_pred CeEEEECC--------CHHH---HHHHHHHHHCCCceEEEec
Confidence 78999985 5555 3477888999999999875
No 197
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=47.33 E-value=22 Score=37.60 Aligned_cols=36 Identities=31% Similarity=0.447 Sum_probs=27.9
Q ss_pred CceEEEEeeeccCccccccHHHH--HhhhHHHHHHCCCeEEEEE
Q 010752 84 GLNILFVGTEVAPWSKTGGLGDV--LGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~~~--v~~La~aLa~~Gh~V~vit 125 (502)
.|+|+-|.+ ..||+|+- ...||.+|+.+|++|.+|=
T Consensus 120 ~~~vIav~n------~KGGvGKTTta~nLA~~LA~~G~rVLlID 157 (405)
T PRK13869 120 HLQVIAVTN------FKGGSGKTTTSAHLAQYLALQGYRVLAVD 157 (405)
T ss_pred CceEEEEEc------CCCCCCHHHHHHHHHHHHHhcCCceEEEc
Confidence 577777765 35777765 5679999999999998884
No 198
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=46.60 E-value=22 Score=35.12 Aligned_cols=38 Identities=24% Similarity=0.304 Sum_probs=27.3
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCC
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~ 130 (502)
||||..+.+-. -+.-+..|.++|++ +|+|.|++|...+
T Consensus 1 M~ILlTNDDGi-------~a~Gi~aL~~~l~~-~~~V~VvAP~~~q 38 (253)
T PRK13935 1 MNILVTNDDGI-------TSPGIIILAEYLSE-KHEVFVVAPDKER 38 (253)
T ss_pred CeEEEECCCCC-------CCHHHHHHHHHHHh-CCcEEEEccCCCC
Confidence 89999887632 12236678888876 5799999997544
No 199
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=46.60 E-value=25 Score=35.51 Aligned_cols=33 Identities=27% Similarity=0.376 Sum_probs=26.3
Q ss_pred CceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
.|||++++. |++|.+ ++-.|++.|++|++++..
T Consensus 2 ~m~I~IiGa--------GaiG~~---~a~~L~~~G~~V~lv~r~ 34 (305)
T PRK05708 2 SMTWHILGA--------GSLGSL---WACRLARAGLPVRLILRD 34 (305)
T ss_pred CceEEEECC--------CHHHHH---HHHHHHhCCCCeEEEEec
Confidence 589999986 777755 556688899999999764
No 200
>PLN00016 RNA-binding protein; Provisional
Probab=45.82 E-value=27 Score=36.24 Aligned_cols=38 Identities=26% Similarity=0.287 Sum_probs=27.3
Q ss_pred CceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
.|||+.++.+ .||.|.+=..|++.|.++||+|++++..
T Consensus 52 ~~~VLVt~~~------~GatG~iG~~lv~~L~~~G~~V~~l~R~ 89 (378)
T PLN00016 52 KKKVLIVNTN------SGGHAFIGFYLAKELVKAGHEVTLFTRG 89 (378)
T ss_pred cceEEEEecc------CCCceeEhHHHHHHHHHCCCEEEEEecC
Confidence 4688877553 2444444456889999999999998754
No 201
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=45.66 E-value=31 Score=36.55 Aligned_cols=32 Identities=22% Similarity=0.288 Sum_probs=24.2
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
|||+.|+.. .-|.+.+. .|++.||+|.++..-
T Consensus 1 mkiaiigqs------~fg~~vy~-----~lrk~gheiv~vfti 32 (881)
T KOG2452|consen 1 MKIAVIGQS------LFGQEVYC-----HLRKEGHEVVGVFTV 32 (881)
T ss_pred CeeEEechh------hhhHHHHH-----HHHhcCceEEEEEEe
Confidence 899999874 24666654 499999999887543
No 202
>PF00205 TPP_enzyme_M: Thiamine pyrophosphate enzyme, central domain; InterPro: IPR012000 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor. It has been shown [] that some of these enzymes are structurally related. This central domain of TPP enzymes contains a 2-fold Rossman fold. ; GO: 0000287 magnesium ion binding, 0030976 thiamine pyrophosphate binding; PDB: 1OZH_C 1OZF_B 1OZG_B 2Q29_B 2Q28_A 2Q27_B 1OVM_B 1PVD_A 1PYD_B 2VK1_C ....
Probab=45.61 E-value=54 Score=28.50 Aligned_cols=20 Identities=30% Similarity=0.423 Sum_probs=15.3
Q ss_pred ecChHHHHHHHHhcCEEEEc
Q 010752 464 KFNIPLAHMIIAGADFILIP 483 (502)
Q Consensus 464 ~~~~~~~~~ila~ADi~l~P 483 (502)
.+..+...++++.||++|+=
T Consensus 65 ~~~~~~~~~~l~~aDlvl~i 84 (137)
T PF00205_consen 65 LFGSPAANEALEQADLVLAI 84 (137)
T ss_dssp GGSCHHHHHHHHHSSEEEEE
T ss_pred ccCCHHHHHHhcCCCEEEEE
Confidence 33456677899999999875
No 203
>TIGR03453 partition_RepA plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error.
Probab=45.38 E-value=26 Score=36.71 Aligned_cols=38 Identities=32% Similarity=0.399 Sum_probs=28.5
Q ss_pred CCceEEEEeeeccCccccccHHHH--HhhhHHHHHHCCCeEEEEEe
Q 010752 83 VGLNILFVGTEVAPWSKTGGLGDV--LGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 83 ~~MkIl~V~~~~~P~~~~GG~~~~--v~~La~aLa~~Gh~V~vitp 126 (502)
++|+|+.|++ ..||+|+- ...||.+|+++|++|.+|=.
T Consensus 102 ~~~~vI~v~n------~KGGvGKTT~a~nLA~~La~~G~rVLlID~ 141 (387)
T TIGR03453 102 EHLQVIAVTN------FKGGSGKTTTAAHLAQYLALRGYRVLAIDL 141 (387)
T ss_pred CCceEEEEEc------cCCCcCHHHHHHHHHHHHHhcCCCEEEEec
Confidence 4577777765 35777665 46699999999999988843
No 204
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=45.38 E-value=39 Score=32.01 Aligned_cols=37 Identities=24% Similarity=0.071 Sum_probs=29.0
Q ss_pred CCceEEEEeeeccCccccccHHHHH--hhhHHHHHHCCCeEEEEEec
Q 010752 83 VGLNILFVGTEVAPWSKTGGLGDVL--GGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 83 ~~MkIl~V~~~~~P~~~~GG~~~~v--~~La~aLa~~Gh~V~vitp~ 127 (502)
.++||++-.+ ||.+.+- .++.+.|.+.||+|.++...
T Consensus 4 ~~k~IllgVT--------Gsiaa~k~a~~lir~L~k~G~~V~vv~T~ 42 (196)
T PRK08305 4 KGKRIGFGLT--------GSHCTYDEVMPEIEKLVDEGAEVTPIVSY 42 (196)
T ss_pred CCCEEEEEEc--------CHHHHHHHHHHHHHHHHhCcCEEEEEECH
Confidence 4578876654 7777665 68999999999999988654
No 205
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=45.13 E-value=26 Score=34.93 Aligned_cols=32 Identities=41% Similarity=0.700 Sum_probs=25.1
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
|||++|+. |.+| ..++..|++.||+|+++..+
T Consensus 1 m~I~IiG~--------G~~G---~~~a~~L~~~g~~V~~~~r~ 32 (304)
T PRK06522 1 MKIAILGA--------GAIG---GLFGAALAQAGHDVTLVARR 32 (304)
T ss_pred CEEEEECC--------CHHH---HHHHHHHHhCCCeEEEEECC
Confidence 78988885 5555 44778899999999999763
No 206
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=45.05 E-value=23 Score=34.85 Aligned_cols=37 Identities=27% Similarity=0.427 Sum_probs=28.4
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCC
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~ 129 (502)
||||..+.+ |=-+.-+.-|+++|+ .+++|+|++|...
T Consensus 1 mrILlTNDD-------Gi~a~Gi~aL~~al~-~~~dV~VVAP~~~ 37 (252)
T COG0496 1 MRILLTNDD-------GIHAPGIRALARALR-EGADVTVVAPDRE 37 (252)
T ss_pred CeEEEecCC-------ccCCHHHHHHHHHHh-hCCCEEEEccCCC
Confidence 899988875 222334677899999 8899999999754
No 207
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=44.95 E-value=24 Score=34.82 Aligned_cols=37 Identities=27% Similarity=0.462 Sum_probs=27.1
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCC
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~ 129 (502)
||||..+.+-.. .-| +..|+++|.+ +|+|.|++|...
T Consensus 1 M~ILvtNDDGi~---apG----l~aL~~~l~~-~~~V~VvAP~~~ 37 (253)
T PRK13933 1 MNILLTNDDGIN---AEG----INTLAELLSK-YHEVIIVAPENQ 37 (253)
T ss_pred CeEEEEcCCCCC---Chh----HHHHHHHHHh-CCcEEEEccCCC
Confidence 899999886332 223 6778888876 579999999754
No 208
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=44.73 E-value=26 Score=33.61 Aligned_cols=37 Identities=24% Similarity=0.436 Sum_probs=25.9
Q ss_pred ceEEEEeeeccCccccccHHH--HHhhhHHHHHHCCCeEEEEEec
Q 010752 85 LNILFVGTEVAPWSKTGGLGD--VLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~--~v~~La~aLa~~Gh~V~vitp~ 127 (502)
|||.-|.+ ..||.|+ ....||.+|+++|++|.++-..
T Consensus 1 m~iI~v~s------~KGGvGKTt~a~nla~~la~~g~~VlliD~D 39 (246)
T TIGR03371 1 MKVIAIVG------VKGGVGKTTLTANLASALKLLGEPVLAIDLD 39 (246)
T ss_pred CcEEEEEe------CCCCccHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 56555543 2466655 5567999999999999988543
No 209
>COG1192 Soj ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=44.45 E-value=31 Score=33.65 Aligned_cols=36 Identities=33% Similarity=0.589 Sum_probs=26.7
Q ss_pred ceEEEEeeeccCccccccHHHHHh--hhHHHHH-HCCCeEEEEEe
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLG--GLPPALA-ANGHRVMTIAP 126 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~--~La~aLa-~~Gh~V~vitp 126 (502)
|+|+-|.+ ..||+|+-+. .||.+|+ ..||+|.++=-
T Consensus 2 ~~iI~v~n------~KGGvGKTT~a~nLa~~La~~~~~kVLliDl 40 (259)
T COG1192 2 MKIIAVAN------QKGGVGKTTTAVNLAAALAKRGGKKVLLIDL 40 (259)
T ss_pred CEEEEEEe------cCCCccHHHHHHHHHHHHHHhcCCcEEEEeC
Confidence 66666665 3688877654 5999999 66699998843
No 210
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=43.74 E-value=30 Score=35.23 Aligned_cols=34 Identities=29% Similarity=0.433 Sum_probs=26.2
Q ss_pred CCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 83 ~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
..|||++|+. |..| ..++..|++.||+|.++..+
T Consensus 3 ~~m~I~iIG~--------G~mG---~~ia~~L~~~G~~V~~~~r~ 36 (328)
T PRK14618 3 HGMRVAVLGA--------GAWG---TALAVLAASKGVPVRLWARR 36 (328)
T ss_pred CCCeEEEECc--------CHHH---HHHHHHHHHCCCeEEEEeCC
Confidence 4689999986 4444 44778899999999998764
No 211
>PRK05866 short chain dehydrogenase; Provisional
Probab=43.62 E-value=43 Score=33.40 Aligned_cols=35 Identities=31% Similarity=0.597 Sum_probs=24.8
Q ss_pred CCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 83 ~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
.+++|++++. .||+| ..+++.|+++|++|.++..+
T Consensus 39 ~~k~vlItGa-------sggIG---~~la~~La~~G~~Vi~~~R~ 73 (293)
T PRK05866 39 TGKRILLTGA-------SSGIG---EAAAEQFARRGATVVAVARR 73 (293)
T ss_pred CCCEEEEeCC-------CcHHH---HHHHHHHHHCCCEEEEEECC
Confidence 3456665553 47777 55788899999999887643
No 212
>PRK09739 hypothetical protein; Provisional
Probab=42.92 E-value=51 Score=30.89 Aligned_cols=41 Identities=17% Similarity=0.229 Sum_probs=28.6
Q ss_pred CCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEe
Q 010752 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 83 ~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp 126 (502)
.+|||++|... |. ..+=.......+.+++.+.||+|.++-.
T Consensus 2 ~mmkiliI~~s--p~-~~s~s~~l~~~~~~~~~~~g~~v~~~dL 42 (199)
T PRK09739 2 QSMRIYLVWAH--PR-HDSLTAKVAEAIHQRAQERGHQVEELDL 42 (199)
T ss_pred CCceEEEEEcC--CC-CCCcHHHHHHHHHHHHHHCCCEEEEEEh
Confidence 36899999874 52 2232444556677888889999998853
No 213
>COG1922 WecG Teichoic acid biosynthesis proteins [Cell envelope biogenesis, outer membrane]
Probab=42.85 E-value=1e+02 Score=30.35 Aligned_cols=71 Identities=24% Similarity=0.413 Sum_probs=47.8
Q ss_pred cccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCC-CceEEE--eecChHHHHHHH-----HhcCEEEEc
Q 010752 413 EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP-EKARGV--AKFNIPLAHMII-----AGADFILIP 483 (502)
Q Consensus 413 ~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~-~~v~~~--~~~~~~~~~~il-----a~ADi~l~P 483 (502)
.--|.|.+.+.++...+++.++-++|+.++-.++..+.+.+++| .++.+. |.|..++..++. .++|++++-
T Consensus 90 rv~G~Dl~~~Ll~~a~~~~~~vfllGgkp~V~~~a~~~l~~~~p~l~ivg~h~GYf~~~e~~~i~~~I~~s~pdil~Vg 168 (253)
T COG1922 90 RVAGTDLVEALLKRAAEEGKRVFLLGGKPGVAEQAAAKLRAKYPGLKIVGSHDGYFDPEEEEAIVERIAASGPDILLVG 168 (253)
T ss_pred cCChHHHHHHHHHHhCccCceEEEecCCHHHHHHHHHHHHHHCCCceEEEecCCCCChhhHHHHHHHHHhcCCCEEEEe
Confidence 34688888888887766778888899877667777888888888 334332 345443333333 367888775
No 214
>PF12996 DUF3880: DUF based on E. rectale Gene description (DUF3880); InterPro: IPR024542 This entry represents proteins of unknown function. The Eubacterium rectale gene appears to be upregulated in the presence of Bacteroides thetaiotaomicron compared to growth in pure culture [].
Probab=41.83 E-value=39 Score=26.77 Aligned_cols=43 Identities=14% Similarity=0.235 Sum_probs=35.9
Q ss_pred HHHhcCccccCCHHHHHHHHcCCCCCCcchhhhccccEEEeeCCCcCCCCCCCc
Q 010752 313 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLT 366 (502)
Q Consensus 313 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~NGvd~~~~~p~~ 366 (502)
.....|.|.+......+++.+ .|++ ++..+|-++|+..+.|..
T Consensus 15 i~~~~~~iFt~D~~~~~~~~~---~G~~--------~V~yLPLAa~~~~~~p~~ 57 (79)
T PF12996_consen 15 IANSYDYIFTFDRSFVEEYRN---LGAE--------NVFYLPLAANPERFRPIP 57 (79)
T ss_pred hCCCCCEEEEECHHHHHHHHH---cCCC--------CEEEccccCCHHHhCccc
Confidence 356799999999999999985 4544 789999999999998864
No 215
>PRK05718 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=41.70 E-value=2.1e+02 Score=27.43 Aligned_cols=73 Identities=15% Similarity=0.155 Sum_probs=44.7
Q ss_pred ccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeec-ChHHHH-HHHHhcCEEEEcCCC
Q 010752 414 QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAH-MIIAGADFILIPSRF 486 (502)
Q Consensus 414 ~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~~-~ila~ADi~l~PS~~ 486 (502)
....+..++.++.+.+..++++=++-..+.-.+.++++.+++++-..+.+.. +.+++. .+-++||+++.|...
T Consensus 23 ~~~~~~a~~i~~al~~~Gi~~iEitl~~~~~~~~I~~l~~~~p~~~IGAGTVl~~~~a~~a~~aGA~FivsP~~~ 97 (212)
T PRK05718 23 INKLEDAVPLAKALVAGGLPVLEVTLRTPAALEAIRLIAKEVPEALIGAGTVLNPEQLAQAIEAGAQFIVSPGLT 97 (212)
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCccHHHHHHHHHHHCCCCEEEEeeccCHHHHHHHHHcCCCEEECCCCC
Confidence 3456666666666665555555455444445667777877787655555543 334443 566788888888654
No 216
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=41.69 E-value=30 Score=33.78 Aligned_cols=26 Identities=38% Similarity=0.641 Sum_probs=21.1
Q ss_pred ccHHH--HHhhhHHHHHHCCCeEEEEEe
Q 010752 101 GGLGD--VLGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 101 GG~~~--~v~~La~aLa~~Gh~V~vitp 126 (502)
||+|+ .+.+||.+|+++|++|.++=-
T Consensus 10 GGvGKTT~~~nLA~~La~~G~kVlliD~ 37 (270)
T cd02040 10 GGIGKSTTTQNLSAALAEMGKKVMIVGC 37 (270)
T ss_pred CcCCHHHHHHHHHHHHHhCCCeEEEEEc
Confidence 66665 457799999999999999843
No 217
>PRK13934 stationary phase survival protein SurE; Provisional
Probab=41.60 E-value=29 Score=34.51 Aligned_cols=37 Identities=22% Similarity=0.194 Sum_probs=27.7
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCC
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~ 129 (502)
||||..+.+-. -+.-+..|.++|.+.| +|+|++|...
T Consensus 1 M~ILlTNDDGi-------~apGi~aL~~al~~~g-~V~VvAP~~e 37 (266)
T PRK13934 1 MKILVTNDDGV-------HSPGLRLLYEFVSPLG-EVDVVAPETP 37 (266)
T ss_pred CeEEEEcCCCC-------CCHHHHHHHHHHHhCC-cEEEEccCCC
Confidence 89998887632 2234677888998887 8999999754
No 218
>PRK05246 glutathione synthetase; Provisional
Probab=41.36 E-value=24 Score=35.86 Aligned_cols=40 Identities=15% Similarity=0.176 Sum_probs=30.2
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
|||+|+-. |+....--......|+++.+++||+|.+++|.
T Consensus 2 ~~~~~~~~---~~~~~~~~~~st~~l~~aa~~~G~~v~~~~~~ 41 (316)
T PRK05246 2 MKVAFQMD---PIESINIKKDSTFAMMLEAQRRGHELFYYEPD 41 (316)
T ss_pred ceEEEEeC---CHHHCCCCCChHHHHHHHHHHcCCEEEEEehh
Confidence 89999985 33333333345567999999999999999986
No 219
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=40.83 E-value=36 Score=32.44 Aligned_cols=31 Identities=29% Similarity=0.453 Sum_probs=22.8
Q ss_pred ceEEEEe-eeccCccccccHHHHHhhhHHHHHHCCCeEEEEEe
Q 010752 85 LNILFVG-TEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 85 MkIl~V~-~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp 126 (502)
|||++|+ . |- +=..++..|++.||+|.++..
T Consensus 1 MkI~IIGG~--------G~---mG~ala~~L~~~G~~V~v~~r 32 (219)
T TIGR01915 1 MKIAVLGGT--------GD---QGKGLALRLAKAGNKIIIGSR 32 (219)
T ss_pred CEEEEEcCC--------CH---HHHHHHHHHHhCCCEEEEEEc
Confidence 7888875 3 32 335688999999999988754
No 220
>PF09140 MipZ: ATPase MipZ; InterPro: IPR015223 Cell division in bacteria is facilitated by a polymeric ring structure, the Z ring, composed of tubulin-like FtsZ protofilaments. Correct positioning of the division plane is a prerequisite for the generation of daughter cells with a normal chromosome complement. In Caulobacter crescentus MipZ, an essential protein, coordinates and regulates the assembly of the FtsZ cytokinetic ring during cell division. MipZ, forms a complex with the partitioning protein ParB near the origin of replication and localizes with the duplicated origin regions to the cell poles. MipZ also directly interferes with FtsZ polymerisation, thereby restricting FtsZ ring formation to mid-cell, the region of lowest MipZ concentration. In eukaryotes members of this entry belong to the Mrp/NBP35 ATP-binding protein family, and specifically the NUBP2/CFD1 subfamily. This includes the cytosolic Fe-S cluster assembly factor Cfd1, which is a component of the cytosolic iron-sulphur (Fe/S) protein assembly machinery. This protein is required for maturation of extra-mitochondrial Fe/S proteins. It may bind and transfer a labile 4Fe-4S cluster to target apoproteins. Cfd1 is also required for biogenesis and export of both ribosomal subunits, suggesting a role in assembly of the Fe/S clusters in RLI1, a protein which performs rRNA processing and ribosome export. ; PDB: 2XIT_B 2XJ4_A 2XJ9_A.
Probab=40.67 E-value=30 Score=34.05 Aligned_cols=29 Identities=31% Similarity=0.378 Sum_probs=20.3
Q ss_pred ccccHHHHH--hhhHHHHHHCCCeEEEEEec
Q 010752 99 KTGGLGDVL--GGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 99 ~~GG~~~~v--~~La~aLa~~Gh~V~vitp~ 127 (502)
..||+|+.+ .+||.+|++.|++|-++=-.
T Consensus 8 gKGGvGKSTva~~lA~aLa~~G~kVg~lD~D 38 (261)
T PF09140_consen 8 GKGGVGKSTVAVNLAVALARMGKKVGLLDLD 38 (261)
T ss_dssp SSTTTTHHHHHHHHHHHHHCTT--EEEEE--
T ss_pred CCCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 468777655 56999999999999999543
No 221
>PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional
Probab=40.60 E-value=32 Score=33.91 Aligned_cols=37 Identities=22% Similarity=0.281 Sum_probs=28.2
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCC
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~ 129 (502)
||||..+.+-. .+.-+..|.++|.+. |+|.|++|...
T Consensus 1 M~ILlTNDDGi-------~a~Gi~aL~~~l~~~-~~V~VvAP~~~ 37 (250)
T PRK00346 1 MRILLTNDDGI-------HAPGIRALAEALREL-ADVTVVAPDRE 37 (250)
T ss_pred CeEEEECCCCC-------CChhHHHHHHHHHhC-CCEEEEeCCCC
Confidence 89999887632 233467888999998 79999999754
No 222
>COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=40.34 E-value=45 Score=34.18 Aligned_cols=36 Identities=25% Similarity=0.535 Sum_probs=28.6
Q ss_pred ceEEEEeeeccCccccccHHH--HHhhhHHHHHHCCCeEEEEEec
Q 010752 85 LNILFVGTEVAPWSKTGGLGD--VLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~--~v~~La~aLa~~Gh~V~vitp~ 127 (502)
|+|+|++- .||+|+ ..-.+|-.|++.|.+|.+++..
T Consensus 2 ~riv~f~G-------KGGVGKTT~aaA~A~~lA~~g~kvLlvStD 39 (322)
T COG0003 2 TRIVFFTG-------KGGVGKTTIAAATAVKLAESGKKVLLVSTD 39 (322)
T ss_pred cEEEEEec-------CCcccHHHHHHHHHHHHHHcCCcEEEEEeC
Confidence 68888884 699999 5555778899999888888654
No 223
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=40.22 E-value=48 Score=30.36 Aligned_cols=40 Identities=28% Similarity=0.247 Sum_probs=32.6
Q ss_pred CceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecC
Q 010752 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~ 128 (502)
+|+|+-|+.. +..|=...+..+.+.|.++|++|.++=..+
T Consensus 1 m~~Il~ivG~-----k~SGKTTLie~lv~~L~~~G~rVa~iKH~h 40 (161)
T COG1763 1 MMKILGIVGY-----KNSGKTTLIEKLVRKLKARGYRVATVKHAH 40 (161)
T ss_pred CCcEEEEEec-----CCCChhhHHHHHHHHHHhCCcEEEEEEecC
Confidence 3677777752 668889999999999999999999996543
No 224
>PLN02927 antheraxanthin epoxidase/zeaxanthin epoxidase
Probab=40.03 E-value=45 Score=37.70 Aligned_cols=33 Identities=24% Similarity=0.344 Sum_probs=25.9
Q ss_pred cCCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEE
Q 010752 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 82 ~~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vit 125 (502)
.+.++|++|+. ..+|+. +|.+|+++|++|+|+=
T Consensus 79 ~~~~~VlIVGg------GIaGLa-----lAlaL~r~Gi~V~V~E 111 (668)
T PLN02927 79 KKKSRVLVAGG------GIGGLV-----FALAAKKKGFDVLVFE 111 (668)
T ss_pred cCCCCEEEECC------CHHHHH-----HHHHHHhcCCeEEEEe
Confidence 44689999996 236654 7888999999999984
No 225
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=39.89 E-value=45 Score=32.68 Aligned_cols=36 Identities=25% Similarity=0.397 Sum_probs=26.7
Q ss_pred ceEEEEeeeccCccccccH--HHHHhhhHHHHHHCCCeEEEEEe
Q 010752 85 LNILFVGTEVAPWSKTGGL--GDVLGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~--~~~v~~La~aLa~~Gh~V~vitp 126 (502)
||++.|.. ..||+ .+++.+|+.+|++.|++|.+|=-
T Consensus 1 M~~iai~s------~kGGvG~TTltAnLA~aL~~~G~~VlaID~ 38 (243)
T PF06564_consen 1 MKVIAIVS------PKGGVGKTTLTANLAWALARLGESVLAIDL 38 (243)
T ss_pred CcEEEEec------CCCCCCHHHHHHHHHHHHHHCCCcEEEEeC
Confidence 66666654 23544 56778899999999999999843
No 226
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=39.87 E-value=11 Score=40.70 Aligned_cols=83 Identities=16% Similarity=0.074 Sum_probs=42.6
Q ss_pred cEEEEEcCccc---ccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCE
Q 010752 403 PVIGFIGRLEE---QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (502)
Q Consensus 403 p~i~~iGrl~~---~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi 479 (502)
-+++..|.+.. .+-.+.+++|++++ ++ ++++.=.+... ..++.++....+.++. ++|+...+
T Consensus 278 vv~vsfGs~~~~~~~~~~~~~~~~~~~~--~~-~~iW~~~~~~~---------~~l~~n~~~~~W~PQ~---~lL~hp~v 342 (500)
T PF00201_consen 278 VVYVSFGSIVSSMPEEKLKEIAEAFENL--PQ-RFIWKYEGEPP---------ENLPKNVLIVKWLPQN---DLLAHPRV 342 (500)
T ss_dssp EEEEE-TSSSTT-HHHHHHHHHHHHHCS--TT-EEEEEETCSHG---------CHHHTTEEEESS--HH---HHHTSTTE
T ss_pred EEEEecCcccchhHHHHHHHHHHHHhhC--CC-ccccccccccc---------ccccceEEEeccccch---hhhhcccc
Confidence 35666688752 22244567777766 33 67765544311 1123456555555543 47776655
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCC
Q 010752 480 ILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 480 ~l~PS~~E~fglv~lEAma~G~P 502 (502)
-++=+ =+--.+++||+.+|+|
T Consensus 343 ~~fit--HgG~~s~~Ea~~~gvP 363 (500)
T PF00201_consen 343 KLFIT--HGGLNSTQEALYHGVP 363 (500)
T ss_dssp EEEEE--S--HHHHHHHHHCT--
T ss_pred eeeee--ccccchhhhhhhccCC
Confidence 33221 1334589999999998
No 227
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=39.00 E-value=32 Score=33.78 Aligned_cols=34 Identities=32% Similarity=0.564 Sum_probs=25.4
Q ss_pred ceEEEEeeeccCccccccHHHH--HhhhHHHHHHCCCeEEEEEe
Q 010752 85 LNILFVGTEVAPWSKTGGLGDV--LGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~--v~~La~aLa~~Gh~V~vitp 126 (502)
|.|++.+ .||+|+- ..+||.+|+++|++|.++=.
T Consensus 1 ~~i~v~g--------KGGvGKTT~a~nLA~~la~~G~rvlliD~ 36 (267)
T cd02032 1 MVLAVYG--------KGGIGKSTTSSNLSVALAKRGKKVLQIGC 36 (267)
T ss_pred CEEEEec--------CCCCCHHHHHHHHHHHHHHCCCcEEEEec
Confidence 5666653 3666654 56799999999999988843
No 228
>PRK13234 nifH nitrogenase reductase; Reviewed
Probab=38.91 E-value=40 Score=33.90 Aligned_cols=36 Identities=19% Similarity=0.332 Sum_probs=26.8
Q ss_pred CCceEEEEeeeccCccccccHHHH--HhhhHHHHHHCCCeEEEEE
Q 010752 83 VGLNILFVGTEVAPWSKTGGLGDV--LGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 83 ~~MkIl~V~~~~~P~~~~GG~~~~--v~~La~aLa~~Gh~V~vit 125 (502)
.+|||.-|+. .||+|+- +.+|+.+|++.|++|-++-
T Consensus 2 ~~~~~iai~~-------KGGvGKTt~~~nLa~~la~~g~kVLliD 39 (295)
T PRK13234 2 SKLRQIAFYG-------KGGIGKSTTSQNTLAALVEMGQKILIVG 39 (295)
T ss_pred CcceEEEEEC-------CCCccHHHHHHHHHHHHHHCCCeEEEEe
Confidence 3577666641 4777665 5779999999999998883
No 229
>TIGR01754 flav_RNR ribonucleotide reductase-associated flavodoxin, putative. This model represents a family of proteins found immediately downstream of ribonucleotide reductase genes in Xyella fastidiosa and some Gram-positive bacteria. It appears to be a highly divergent flavodoxin of the short chain type, more like the flavodoxins of the sulfate-reducing genus Desulfovibrio than like the NifF flavodoxins associated with nitrogen fixation.
Probab=38.70 E-value=49 Score=29.06 Aligned_cols=34 Identities=26% Similarity=0.283 Sum_probs=28.3
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMT 123 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~v 123 (502)
|||++|-. +.+|-.+.+...++..|.+.|++|.+
T Consensus 1 M~i~IiY~-----S~tGnTe~iA~~ia~~l~~~g~~v~~ 34 (140)
T TIGR01754 1 MRILLAYL-----SLSGNTEEVAFMIQDYLQKDGHEVDI 34 (140)
T ss_pred CeEEEEEE-----CCCChHHHHHHHHHHHHhhCCeeEEe
Confidence 77877764 36788999999999999999999874
No 230
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=38.37 E-value=36 Score=34.70 Aligned_cols=32 Identities=34% Similarity=0.386 Sum_probs=25.4
Q ss_pred CceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEe
Q 010752 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp 126 (502)
.|||++|+. |.+| ..++..|++.||+|+++..
T Consensus 2 ~mkI~IiG~--------G~mG---~~~A~~L~~~G~~V~~~~r 33 (341)
T PRK08229 2 MARICVLGA--------GSIG---CYLGGRLAAAGADVTLIGR 33 (341)
T ss_pred CceEEEECC--------CHHH---HHHHHHHHhcCCcEEEEec
Confidence 389999986 5554 4578889999999999875
No 231
>PRK04155 chaperone protein HchA; Provisional
Probab=38.30 E-value=60 Score=32.67 Aligned_cols=49 Identities=14% Similarity=-0.054 Sum_probs=31.3
Q ss_pred eccCCceEEEEeeeccCcc-------ccccHHHHHhhhHHHHHHCCCeEEEEEecC
Q 010752 80 VCGVGLNILFVGTEVAPWS-------KTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (502)
Q Consensus 80 ~~~~~MkIl~V~~~~~P~~-------~~GG~~~~v~~La~aLa~~Gh~V~vitp~~ 128 (502)
.+..+||||+|.+...-+. .+|=-..=+..-...|.+.|++|+++++..
T Consensus 45 ~~~~~kkiL~v~t~~~~~~~~~g~~~~tG~~~~E~~~P~~~L~~AG~eVdiAS~~G 100 (287)
T PRK04155 45 PYRGGKKILMIAADERYLPMDNGKLFSTGNHPVETLLPMYHLHKAGFEFDVATLSG 100 (287)
T ss_pred cCCCCCeEEEEEcCcccccCCCCCcCCCCccHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 3445679999988765432 122222223334567889999999999863
No 232
>COG0716 FldA Flavodoxins [Energy production and conversion]
Probab=38.20 E-value=46 Score=29.74 Aligned_cols=36 Identities=31% Similarity=0.295 Sum_probs=30.5
Q ss_pred CceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEE
Q 010752 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTI 124 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vi 124 (502)
+|||++|.. +.+|..+.+...++..|.+.|++|.+.
T Consensus 1 M~ki~Ivy~-----S~tGnTe~vA~~i~~~l~~~~~~~~~~ 36 (151)
T COG0716 1 MMKILIVYG-----SRTGNTEKVAEIIAEELGADGFEVDID 36 (151)
T ss_pred CCeEEEEEE-----cCCCcHHHHHHHHHHHhccCCceEEEe
Confidence 378888876 367999999999999999999999444
No 233
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=37.77 E-value=5e+02 Score=27.16 Aligned_cols=28 Identities=25% Similarity=0.425 Sum_probs=24.1
Q ss_pred cccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 100 ~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
.+|...+...+..+|...||+|..+=+.
T Consensus 13 ~~~~~~~~~~~~~~l~~~g~kvlflE~~ 40 (373)
T COG4641 13 NNGSAEYYRGLLRALKMDGMKVLFLESG 40 (373)
T ss_pred cCCchhhHHHHHHHHHhccceEEEEecc
Confidence 5677788889999999999999888664
No 234
>TIGR01968 minD_bact septum site-determining protein MinD. This model describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.
Probab=37.62 E-value=40 Score=32.56 Aligned_cols=26 Identities=38% Similarity=0.601 Sum_probs=21.3
Q ss_pred cccHHH--HHhhhHHHHHHCCCeEEEEE
Q 010752 100 TGGLGD--VLGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 100 ~GG~~~--~v~~La~aLa~~Gh~V~vit 125 (502)
.||.|+ ....||.+|++.|++|.++-
T Consensus 10 kGGvGKTt~a~~lA~~la~~g~~vlliD 37 (261)
T TIGR01968 10 KGGVGKTTTTANLGTALARLGKKVVLID 37 (261)
T ss_pred CCCccHHHHHHHHHHHHHHcCCeEEEEE
Confidence 466665 66779999999999998884
No 235
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=37.42 E-value=2.5e+02 Score=26.62 Aligned_cols=71 Identities=8% Similarity=0.046 Sum_probs=43.8
Q ss_pred ccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHH---HHHHC-CCceEEEeecChHHHHHHHHhcCEEEEcC
Q 010752 414 QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQ---LEILY-PEKARGVAKFNIPLAHMIIAGADFILIPS 484 (502)
Q Consensus 414 ~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~---l~~~~-~~~v~~~~~~~~~~~~~ila~ADi~l~PS 484 (502)
.-+.+.+.+.+..+.+++.+++++.+.....++.++. .-.++ +-.+.....++.+...+.+..||++++|=
T Consensus 14 ~~~~~~l~~~l~~~~~~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~~~~~~~~l~~ad~I~l~G 88 (212)
T cd03146 14 AHALPAIDDLLLSLTKARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFDTEDPLDALLEADVIYVGG 88 (212)
T ss_pred ccchHHHHHHHHHhccCCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccCcccHHHHHhcCCEEEECC
Confidence 4466777777777655678899998875433333333 33344 43333333333345567889999999993
No 236
>PLN02572 UDP-sulfoquinovose synthase
Probab=36.69 E-value=52 Score=35.16 Aligned_cols=34 Identities=18% Similarity=0.254 Sum_probs=24.7
Q ss_pred cCCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEE
Q 010752 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 82 ~~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vit 125 (502)
.++|+|+..+. +|++| ..|++.|.++||+|.++.
T Consensus 45 ~~~k~VLVTGa-------tGfIG---s~Lv~~L~~~G~~V~~~d 78 (442)
T PLN02572 45 SKKKKVMVIGG-------DGYCG---WATALHLSKRGYEVAIVD 78 (442)
T ss_pred ccCCEEEEECC-------CcHHH---HHHHHHHHHCCCeEEEEe
Confidence 34577766553 46666 458899999999998874
No 237
>PRK13232 nifH nitrogenase reductase; Reviewed
Probab=35.78 E-value=39 Score=33.30 Aligned_cols=26 Identities=27% Similarity=0.633 Sum_probs=21.4
Q ss_pred cccHHHH--HhhhHHHHHHCCCeEEEEE
Q 010752 100 TGGLGDV--LGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 100 ~GG~~~~--v~~La~aLa~~Gh~V~vit 125 (502)
.||+|+- ..+||.+|+++|.+|.++=
T Consensus 9 KGGVGKTT~a~nLA~~La~~G~rVllvD 36 (273)
T PRK13232 9 KGGIGKSTTTQNLTAALSTMGNKILLVG 36 (273)
T ss_pred CCCCcHHHHHHHHHHHHHhhCCCeEEEe
Confidence 4777765 4679999999999999983
No 238
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=35.48 E-value=42 Score=30.41 Aligned_cols=36 Identities=39% Similarity=0.479 Sum_probs=29.9
Q ss_pred CceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecC
Q 010752 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~ 128 (502)
++||++|+. . -+.++.++..++++.|.+|.+++|..
T Consensus 2 gl~i~~vGD--~-------~~rv~~Sl~~~~~~~g~~~~~~~P~~ 37 (158)
T PF00185_consen 2 GLKIAYVGD--G-------HNRVAHSLIELLAKFGMEVVLIAPEG 37 (158)
T ss_dssp TEEEEEESS--T-------TSHHHHHHHHHHHHTTSEEEEESSGG
T ss_pred CCEEEEECC--C-------CChHHHHHHHHHHHcCCEEEEECCCc
Confidence 678999984 1 14588999999999999999999874
No 239
>PHA02519 plasmid partition protein SopA; Reviewed
Probab=35.45 E-value=46 Score=34.96 Aligned_cols=36 Identities=31% Similarity=0.332 Sum_probs=27.3
Q ss_pred CceEEEEeeeccCccccccHHHH--HhhhHHHHHHCCCeEEEEE
Q 010752 84 GLNILFVGTEVAPWSKTGGLGDV--LGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~~~--v~~La~aLa~~Gh~V~vit 125 (502)
+++|+-|.+ ..||+|+- ...||.+|+.+|++|.+|=
T Consensus 105 ~~~vIav~n------~KGGVGKTTta~nLA~~LA~~G~rVLlID 142 (387)
T PHA02519 105 NPVVLAVMS------HKGGVYKTSSAVHTAQWLALQGHRVLLIE 142 (387)
T ss_pred CceEEEEec------CCCCCcHHHHHHHHHHHHHhCCCcEEEEe
Confidence 466766664 35887765 5679999999999998884
No 240
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=35.34 E-value=45 Score=33.84 Aligned_cols=32 Identities=22% Similarity=0.365 Sum_probs=24.5
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
|||++|++ |.+| ..++..|++.||+|.++..+
T Consensus 1 MkI~IiGa--------Ga~G---~ala~~L~~~g~~V~l~~r~ 32 (326)
T PRK14620 1 MKISILGA--------GSFG---TAIAIALSSKKISVNLWGRN 32 (326)
T ss_pred CEEEEECc--------CHHH---HHHHHHHHHCCCeEEEEecC
Confidence 78888886 4444 34788899999999988653
No 241
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=34.88 E-value=53 Score=28.33 Aligned_cols=34 Identities=12% Similarity=-0.021 Sum_probs=17.0
Q ss_pred HHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 469 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 469 ~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~P 502 (502)
.+.+++..+|+++--|.-+..--.+-.|+.+|+|
T Consensus 60 ~l~~~~~~~DVvIDfT~p~~~~~~~~~~~~~g~~ 93 (124)
T PF01113_consen 60 DLEELLEEADVVIDFTNPDAVYDNLEYALKHGVP 93 (124)
T ss_dssp -HHHHTTH-SEEEEES-HHHHHHHHHHHHHHT-E
T ss_pred hHHHhcccCCEEEEcCChHHhHHHHHHHHhCCCC
Confidence 3456777788887776444433344444555543
No 242
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=34.51 E-value=57 Score=32.41 Aligned_cols=27 Identities=33% Similarity=0.571 Sum_probs=22.7
Q ss_pred cccHHHHHhhhHHHHHHCCCeEEEEEecCC
Q 010752 100 TGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (502)
Q Consensus 100 ~GG~~~~v~~La~aLa~~Gh~V~vitp~~~ 129 (502)
++|+| .++++.|+++||.|.+++.+-+
T Consensus 15 SsGIG---~~~A~~lA~~g~~liLvaR~~~ 41 (265)
T COG0300 15 SSGIG---AELAKQLARRGYNLILVARRED 41 (265)
T ss_pred CchHH---HHHHHHHHHCCCEEEEEeCcHH
Confidence 58888 6799999999999999886543
No 243
>PRK13235 nifH nitrogenase reductase; Reviewed
Probab=34.37 E-value=47 Score=32.77 Aligned_cols=26 Identities=31% Similarity=0.557 Sum_probs=21.7
Q ss_pred cccHHHH--HhhhHHHHHHCCCeEEEEE
Q 010752 100 TGGLGDV--LGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 100 ~GG~~~~--v~~La~aLa~~Gh~V~vit 125 (502)
.||+|+- +.+||.+|+++|++|.++=
T Consensus 9 KGGVGKTT~~~nLA~~La~~G~rVLlID 36 (274)
T PRK13235 9 KGGIGKSTTTQNTVAGLAEMGKKVMVVG 36 (274)
T ss_pred CCCccHHHHHHHHHHHHHHCCCcEEEEe
Confidence 4887765 5679999999999999984
No 244
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=33.94 E-value=53 Score=31.67 Aligned_cols=34 Identities=24% Similarity=0.285 Sum_probs=25.3
Q ss_pred CCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEe
Q 010752 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 83 ~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp 126 (502)
++|+|++++. +|++| ..+++.|.++||+|.+++.
T Consensus 16 ~~~~ilItGa-------sG~iG---~~l~~~L~~~g~~V~~~~R 49 (251)
T PLN00141 16 KTKTVFVAGA-------TGRTG---KRIVEQLLAKGFAVKAGVR 49 (251)
T ss_pred cCCeEEEECC-------CcHHH---HHHHHHHHhCCCEEEEEec
Confidence 3578888775 47766 4577888899999987764
No 245
>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....
Probab=33.75 E-value=52 Score=28.52 Aligned_cols=35 Identities=20% Similarity=0.043 Sum_probs=24.4
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEe
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp 126 (502)
|||+++.+. .++.- ...++.+.|.+.|++|.++..
T Consensus 1 k~i~l~vtG------s~~~~-~~~~~l~~L~~~g~~v~vv~S 35 (129)
T PF02441_consen 1 KRILLGVTG------SIAAY-KAPDLLRRLKRAGWEVRVVLS 35 (129)
T ss_dssp -EEEEEE-S------SGGGG-GHHHHHHHHHTTTSEEEEEES
T ss_pred CEEEEEEEC------HHHHH-HHHHHHHHHhhCCCEEEEEEC
Confidence 678877762 23333 367899999999999998864
No 246
>PRK11104 hemG protoporphyrinogen oxidase; Provisional
Probab=33.55 E-value=54 Score=30.31 Aligned_cols=35 Identities=14% Similarity=0.260 Sum_probs=28.7
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vit 125 (502)
|||++|-. +.+|-...+...+++.|.. |++|.++-
T Consensus 1 MkilIvY~-----S~~G~T~~iA~~Ia~~l~~-g~~v~~~~ 35 (177)
T PRK11104 1 MKTLILYS-----SRDGQTRKIASYIASELKE-GIQCDVVN 35 (177)
T ss_pred CcEEEEEE-----CCCChHHHHHHHHHHHhCC-CCeEEEEE
Confidence 78888775 3678888888889999988 99998864
No 247
>PRK10427 putative PTS system fructose-like transporter subunit EIIB; Provisional
Probab=33.17 E-value=79 Score=27.13 Aligned_cols=38 Identities=11% Similarity=-0.012 Sum_probs=29.5
Q ss_pred ceEEEEeeeccCccccccHHHHH--hhhHHHHHHCCCeEEEEEec
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVL--GGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v--~~La~aLa~~Gh~V~vitp~ 127 (502)
|||+.|+. +| +|-...++ ..|.++-.+.||++.|=+-.
T Consensus 3 mkivaVta--cp---~GiAht~lAAeaL~kAA~~~G~~i~VE~qg 42 (114)
T PRK10427 3 AYLVAVTA--CV---SGVAHTYMAAERLEKLCQLEKWGVKIETQG 42 (114)
T ss_pred ceEEEEee--CC---CcHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 89999987 55 57777666 44778888999999987643
No 248
>PRK06703 flavodoxin; Provisional
Probab=32.84 E-value=80 Score=27.98 Aligned_cols=36 Identities=25% Similarity=0.257 Sum_probs=29.4
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vit 125 (502)
|||+.+.. +.+|-...+...+++.|.+.|++|.+.-
T Consensus 2 mkv~IiY~-----S~tGnT~~iA~~ia~~l~~~g~~v~~~~ 37 (151)
T PRK06703 2 AKILIAYA-----SMSGNTEDIADLIKVSLDAFDHEVVLQE 37 (151)
T ss_pred CeEEEEEE-----CCCchHHHHHHHHHHHHHhcCCceEEEe
Confidence 67766654 2578999999999999999999998864
No 249
>COG0512 PabA Anthranilate/para-aminobenzoate synthases component II [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=32.57 E-value=53 Score=30.88 Aligned_cols=33 Identities=18% Similarity=0.150 Sum_probs=27.4
Q ss_pred CceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEe
Q 010752 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp 126 (502)
+|+||+|-++ -.++++|++.|.+.|++|+|+-.
T Consensus 1 ~~~IL~IDNy----------DSFtyNLv~yl~~lg~~v~V~rn 33 (191)
T COG0512 1 MMMILLIDNY----------DSFTYNLVQYLRELGAEVTVVRN 33 (191)
T ss_pred CceEEEEECc----------cchHHHHHHHHHHcCCceEEEEC
Confidence 3789999873 23799999999999999999854
No 250
>PLN02448 UDP-glycosyltransferase family protein
Probab=32.56 E-value=2.3e+02 Score=30.38 Aligned_cols=86 Identities=13% Similarity=0.044 Sum_probs=46.0
Q ss_pred cEEEEEcCccc--ccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCEE
Q 010752 403 PVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (502)
Q Consensus 403 p~i~~iGrl~~--~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi~ 480 (502)
.+.+..|.... .+-++.++++++. .+..++++..+.. ..+. +..++++....+.+.. ++|+..++.
T Consensus 276 vvyvsfGs~~~~~~~~~~~~~~~l~~---~~~~~lw~~~~~~---~~~~---~~~~~~~~v~~w~pQ~---~iL~h~~v~ 343 (459)
T PLN02448 276 VLYVSLGSFLSVSSAQMDEIAAGLRD---SGVRFLWVARGEA---SRLK---EICGDMGLVVPWCDQL---KVLCHSSVG 343 (459)
T ss_pred eEEEeecccccCCHHHHHHHHHHHHh---CCCCEEEEEcCch---hhHh---HhccCCEEEeccCCHH---HHhccCccc
Confidence 35566677642 2224555555554 3667776654331 1122 2223445444444432 378887772
Q ss_pred EEcCCCCCCcHHHHHHHHcCCC
Q 010752 481 LIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 481 l~PS~~E~fglv~lEAma~G~P 502 (502)
.+= .-+-..+++||+++|+|
T Consensus 344 ~fv--tHgG~nS~~eal~~GvP 363 (459)
T PLN02448 344 GFW--THCGWNSTLEAVFAGVP 363 (459)
T ss_pred eEE--ecCchhHHHHHHHcCCC
Confidence 221 12333689999999998
No 251
>PF02525 Flavodoxin_2: Flavodoxin-like fold; InterPro: IPR003680 This family consists of a domain with a flavodoxin-like fold. The family includes bacterial and eukaryotic NAD(P)H dehydrogenase (quinone) 1.6.99.2 from EC. These enzymes catalyse the NAD(P)H-dependent two-electron reductions of quinones and protect cells against damage by free radicals and reactive oxygen species []. This enzyme uses a FAD cofactor. The equation for this reaction is NAD(P)H + acceptor = NAD(P)(+) + reduced acceptor. This enzyme is also involved in the bioactivation of prodrugs used in chemotherapy []. The family also includes acyl carrier protein phosphodiesterase 3.1.4.14 from EC. This enzyme converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine residue from ACP []. This family is related to FMN_red IPR005025 from INTERPRO and Flavodoxin_1 IPR008254 from INTERPRO.; GO: 0009055 electron carrier activity, 0016491 oxidoreductase activity, 0050662 coenzyme binding; PDB: 1T5B_B 1DXQ_B 2B3D_A 2Z9D_B 2Z9C_A 2Z98_A 2D5I_A 2Z9B_A 1TIK_A 1V4B_A ....
Probab=32.54 E-value=65 Score=30.02 Aligned_cols=37 Identities=22% Similarity=0.405 Sum_probs=26.2
Q ss_pred ceEEEEeeeccCccccccH-HHHHhhhHHHHHHCC-CeEEEE
Q 010752 85 LNILFVGTEVAPWSKTGGL-GDVLGGLPPALAANG-HRVMTI 124 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~-~~~v~~La~aLa~~G-h~V~vi 124 (502)
||||+|... |. ..++. ......+.+++.++| |+|.++
T Consensus 1 mkiLvI~as--p~-~~~S~s~~l~~~~~~~~~~~~~~~v~~~ 39 (199)
T PF02525_consen 1 MKILVINAS--PR-PEGSFSRALADAFLEGLQEAGPHEVEIR 39 (199)
T ss_dssp EEEEEEE----SS-TTTSHHHHHHHHHHHHHHHHTTSEEEEE
T ss_pred CEEEEEEcC--CC-CccCHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 899999984 52 22454 445566889999999 999887
No 252
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=32.48 E-value=55 Score=32.93 Aligned_cols=32 Identities=38% Similarity=0.547 Sum_probs=24.6
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
|||++|+. |..| ..++..|++.||+|.++...
T Consensus 2 mkI~iiG~--------G~mG---~~~a~~L~~~g~~V~~~~r~ 33 (325)
T PRK00094 2 MKIAVLGA--------GSWG---TALAIVLARNGHDVTLWARD 33 (325)
T ss_pred CEEEEECC--------CHHH---HHHHHHHHhCCCEEEEEECC
Confidence 79999985 5555 44778889999999888653
No 253
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=32.27 E-value=58 Score=31.17 Aligned_cols=32 Identities=25% Similarity=0.596 Sum_probs=23.5
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEe
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp 126 (502)
|+|+.++. +||+|. .+++.|.++|++|.+++.
T Consensus 1 ~~vlItGa-------sg~iG~---~la~~l~~~G~~V~~~~r 32 (248)
T PRK10538 1 MIVLVTGA-------TAGFGE---CITRRFIQQGHKVIATGR 32 (248)
T ss_pred CEEEEECC-------CchHHH---HHHHHHHHCCCEEEEEEC
Confidence 56666653 477774 478899999999987754
No 254
>PRK00211 sulfur relay protein TusC; Validated
Probab=32.08 E-value=78 Score=27.29 Aligned_cols=39 Identities=23% Similarity=0.055 Sum_probs=26.9
Q ss_pred ceEEEEeeeccCcccccc-HHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 85 LNILFVGTEVAPWSKTGG-LGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG-~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
|||+||... +|| |. .+.--.+++-++++.+++|.++--.
T Consensus 2 ~ki~~i~~~-~Py---g~~~~~eaLd~ala~~a~~~~v~vff~~ 41 (119)
T PRK00211 2 KRIAFVFRQ-APH---GTASGREGLDALLATSAFTEDIGVFFID 41 (119)
T ss_pred ceEEEEecC-CCC---CCHHHHHHHHHHHHHhcccCCeeEEEEh
Confidence 579999876 786 43 3333344577778889999888643
No 255
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=31.99 E-value=56 Score=32.33 Aligned_cols=26 Identities=31% Similarity=0.708 Sum_probs=21.4
Q ss_pred cccHHHH--HhhhHHHHHHCCCeEEEEE
Q 010752 100 TGGLGDV--LGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 100 ~GG~~~~--v~~La~aLa~~Gh~V~vit 125 (502)
.||+|+- +.+||.+|+++|++|.++=
T Consensus 9 KGGVGKTT~a~nLA~~La~~G~rVLliD 36 (279)
T PRK13230 9 KGGIGKSTTVCNIAAALAESGKKVLVVG 36 (279)
T ss_pred CCCCcHHHHHHHHHHHHHhCCCEEEEEe
Confidence 4777765 4679999999999998884
No 256
>CHL00194 ycf39 Ycf39; Provisional
Probab=31.92 E-value=55 Score=32.89 Aligned_cols=33 Identities=24% Similarity=0.456 Sum_probs=23.1
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
|||+.++. +|-+| ..++++|.++||+|.+++..
T Consensus 1 MkIlVtGa-------tG~iG---~~lv~~Ll~~g~~V~~l~R~ 33 (317)
T CHL00194 1 MSLLVIGA-------TGTLG---RQIVRQALDEGYQVRCLVRN 33 (317)
T ss_pred CEEEEECC-------CcHHH---HHHHHHHHHCCCeEEEEEcC
Confidence 67766553 23333 55888999999999988743
No 257
>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]
Probab=31.84 E-value=45 Score=32.31 Aligned_cols=36 Identities=31% Similarity=0.481 Sum_probs=27.0
Q ss_pred eEEEEeeeccCccccccHHHHH--hhhHHHHHHCCCeEEEEEec
Q 010752 86 NILFVGTEVAPWSKTGGLGDVL--GGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 86 kIl~V~~~~~P~~~~GG~~~~v--~~La~aLa~~Gh~V~vitp~ 127 (502)
+|..|++ ..||+|+-+ .++..+||++|+.|.++-..
T Consensus 3 ~iIVvTS------GKGGVGKTTttAnig~aLA~~GkKv~liD~D 40 (272)
T COG2894 3 RIIVVTS------GKGGVGKTTTTANIGTALAQLGKKVVLIDFD 40 (272)
T ss_pred eEEEEec------CCCCcCccchhHHHHHHHHHcCCeEEEEecC
Confidence 4555664 568887654 45999999999999998543
No 258
>PRK10446 ribosomal protein S6 modification protein; Provisional
Probab=31.78 E-value=54 Score=32.84 Aligned_cols=35 Identities=20% Similarity=0.276 Sum_probs=27.5
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
|||++++.+..-+ ....+.+++.++||+|.++.+.
T Consensus 1 m~~~i~~~~~s~~--------s~~~~~~a~~~~g~~v~~i~~~ 35 (300)
T PRK10446 1 MKIAILSRDGTLY--------SCKRLREAAIQRGHLVEILDPL 35 (300)
T ss_pred CeEEEEecCCcch--------hHHHHHHHHHHcCCeEEEEehH
Confidence 7899999764332 3467899999999999999754
No 259
>PHA02518 ParA-like protein; Provisional
Probab=31.73 E-value=53 Score=30.54 Aligned_cols=33 Identities=30% Similarity=0.481 Sum_probs=0.0
Q ss_pred ceEEEEeeeccCccccccHHHHHhh--hHHHHHHCCCeEEEE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGG--LPPALAANGHRVMTI 124 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~--La~aLa~~Gh~V~vi 124 (502)
|-|+|.+. .||+|+-+.. ||.+|+++|++|.++
T Consensus 1 ~ii~v~~~-------KGGvGKTT~a~~la~~la~~g~~vlli 35 (211)
T PHA02518 1 KIIAVLNQ-------KGGAGKTTVATNLASWLHADGHKVLLV 35 (211)
T ss_pred CEEEEEcC-------CCCCCHHHHHHHHHHHHHhCCCeEEEE
No 260
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=31.58 E-value=39 Score=33.76 Aligned_cols=31 Identities=32% Similarity=0.431 Sum_probs=26.4
Q ss_pred ccccHHHHHhhhHHHHHHCCCeEEEEEecCC
Q 010752 99 KTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (502)
Q Consensus 99 ~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~ 129 (502)
.+||.|-+=..|...|.+.||+|++++.+..
T Consensus 3 iTGgTGlIG~~L~~~L~~~gh~v~iltR~~~ 33 (297)
T COG1090 3 ITGGTGLIGRALTARLRKGGHQVTILTRRPP 33 (297)
T ss_pred EeccccchhHHHHHHHHhCCCeEEEEEcCCc
Confidence 4688887777899999999999999987644
No 261
>TIGR00639 PurN phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent. In phylogenetic analyses, the member from Saccharomyces cerevisiae shows a long branch length but membership in the family, while the formyltetrahydrofolate deformylases form a closely related outgroup.
Probab=31.49 E-value=2.2e+02 Score=26.71 Aligned_cols=34 Identities=18% Similarity=0.183 Sum_probs=23.3
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCC--eEEEEEec
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGH--RVMTIAPR 127 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh--~V~vitp~ 127 (502)
|||+++.+ |-+.....+.+++.+.++ +|.++.+.
T Consensus 1 ~riail~s---------g~gs~~~~ll~~~~~~~l~~~I~~vi~~ 36 (190)
T TIGR00639 1 KRIVVLIS---------GNGSNLQAIIDACKEGKIPASVVLVISN 36 (190)
T ss_pred CeEEEEEc---------CCChhHHHHHHHHHcCCCCceEEEEEEC
Confidence 68888875 334467788888888766 66655454
No 262
>PRK13185 chlL protochlorophyllide reductase iron-sulfur ATP-binding protein; Provisional
Probab=31.42 E-value=56 Score=32.03 Aligned_cols=26 Identities=35% Similarity=0.636 Sum_probs=21.1
Q ss_pred cccHHHH--HhhhHHHHHHCCCeEEEEE
Q 010752 100 TGGLGDV--LGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 100 ~GG~~~~--v~~La~aLa~~Gh~V~vit 125 (502)
.||+|+- +.+||.+|+++|++|-++=
T Consensus 10 KGGVGKTT~~~nLA~~la~~G~kVLliD 37 (270)
T PRK13185 10 KGGIGKSTTSSNLSAAFAKLGKKVLQIG 37 (270)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCeEEEEe
Confidence 3666654 5779999999999998884
No 263
>PRK12827 short chain dehydrogenase; Provisional
Probab=31.40 E-value=62 Score=30.62 Aligned_cols=33 Identities=33% Similarity=0.606 Sum_probs=25.1
Q ss_pred CceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEe
Q 010752 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp 126 (502)
+|+|++++. .||+| ..+++.|+++||+|.++..
T Consensus 6 ~~~ilItGa-------sg~iG---~~la~~l~~~g~~v~~~~~ 38 (249)
T PRK12827 6 SRRVLITGG-------SGGLG---RAIAVRLAADGADVIVLDI 38 (249)
T ss_pred CCEEEEECC-------CChHH---HHHHHHHHHCCCeEEEEcC
Confidence 477776664 47777 4688999999999988753
No 264
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=30.89 E-value=68 Score=31.83 Aligned_cols=32 Identities=38% Similarity=0.577 Sum_probs=24.1
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
|||++|+. |-.| +.++.+|.+.||+|.++.++
T Consensus 1 m~I~IIG~--------G~mG---~sla~~L~~~g~~V~~~d~~ 32 (279)
T PRK07417 1 MKIGIVGL--------GLIG---GSLGLDLRSLGHTVYGVSRR 32 (279)
T ss_pred CeEEEEee--------cHHH---HHHHHHHHHCCCEEEEEECC
Confidence 68888874 3333 56888999999999888654
No 265
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=30.88 E-value=4.5e+02 Score=25.39 Aligned_cols=50 Identities=16% Similarity=0.232 Sum_probs=29.3
Q ss_pred eeeccCCceEEEEeeeccCcccc---c--------------------cHHHHHhhhHHHHHHCCCeEEEEEecCC
Q 010752 78 MIVCGVGLNILFVGTEVAPWSKT---G--------------------GLGDVLGGLPPALAANGHRVMTIAPRYD 129 (502)
Q Consensus 78 ~~~~~~~MkIl~V~~~~~P~~~~---G--------------------G~~~~v~~La~aLa~~Gh~V~vitp~~~ 129 (502)
.+...++.||.|++......... + ++ ..+.+..+.+. .+.++.|+++.++
T Consensus 122 ~i~~~~g~kia~l~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~i~~~r-~~~D~vIv~~HwG 194 (250)
T PF09587_consen 122 AIIEVNGVKIAFLGYTDGENGYSSANGNRPYGFSYRPDKAGLNPNRPGI-ERIKEDIREAR-KKADVVIVSLHWG 194 (250)
T ss_pred EEEEECCEEEEEEEEEcCCCCCccccccccccccccccccccccccchH-HHHHHHHHHHh-cCCCEEEEEeccC
Confidence 44445789999999765531110 0 01 33444555555 5688888887754
No 266
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=30.87 E-value=67 Score=30.23 Aligned_cols=34 Identities=29% Similarity=0.390 Sum_probs=24.4
Q ss_pred CceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
.|+|++++. +||+| ..|++.|.++||+|.+++.+
T Consensus 6 ~~~vlItGa-------sg~iG---~~l~~~l~~~g~~v~~~~~~ 39 (249)
T PRK12825 6 GRVALVTGA-------ARGLG---RAIALRLARAGADVVVHYRS 39 (249)
T ss_pred CCEEEEeCC-------CchHH---HHHHHHHHHCCCeEEEEeCC
Confidence 356776664 47766 55888899999999776544
No 267
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=30.65 E-value=59 Score=32.72 Aligned_cols=31 Identities=29% Similarity=0.512 Sum_probs=22.9
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vit 125 (502)
|||+.++. +|++| ..+++.|.++||+|.++.
T Consensus 1 m~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~ 31 (338)
T PRK10675 1 MRVLVTGG-------SGYIG---SHTCVQLLQNGHDVVILD 31 (338)
T ss_pred CeEEEECC-------CChHH---HHHHHHHHHCCCeEEEEe
Confidence 67776653 36555 457889999999998875
No 268
>TIGR00288 conserved hypothetical protein TIGR00288. This family of orthologs is restricted to but universal among the completed archaeal genomes so far. Eubacterial proteins showing at least local homology include slr1870 from Synechocystis PCC6803 and two proteins from Aquifex aeolicusr, none of which is characterized.
Probab=30.64 E-value=1.9e+02 Score=26.48 Aligned_cols=65 Identities=11% Similarity=0.113 Sum_probs=41.5
Q ss_pred HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCEEEEc
Q 010752 417 SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIP 483 (502)
Q Consensus 417 ~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi~l~P 483 (502)
+.+.++|+..+..+++.-+++-+|+..+...++.+.++ +-.|...+. .......+.++||-|+.-
T Consensus 91 v~laIDame~~~~~~iD~~vLvSgD~DF~~Lv~~lre~-G~~V~v~g~-~~~ts~~L~~acd~FI~L 155 (160)
T TIGR00288 91 VRMAVEAMELIYNPNIDAVALVTRDADFLPVINKAKEN-GKETIVIGA-EPGFSTALQNSADIAIIL 155 (160)
T ss_pred HHHHHHHHHHhccCCCCEEEEEeccHhHHHHHHHHHHC-CCEEEEEeC-CCCChHHHHHhcCeEEeC
Confidence 56789999887555444444444444477777777655 655666662 333455688999988753
No 269
>PRK07023 short chain dehydrogenase; Provisional
Probab=30.60 E-value=68 Score=30.50 Aligned_cols=32 Identities=28% Similarity=0.501 Sum_probs=23.9
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEe
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp 126 (502)
|+|+..+. +||+| ..+++.|+++|++|.+++.
T Consensus 2 ~~vlItGa-------sggiG---~~ia~~l~~~G~~v~~~~r 33 (243)
T PRK07023 2 VRAIVTGH-------SRGLG---AALAEQLLQPGIAVLGVAR 33 (243)
T ss_pred ceEEEecC-------CcchH---HHHHHHHHhCCCEEEEEec
Confidence 66766664 47777 4578889999999988754
No 270
>PRK13931 stationary phase survival protein SurE; Provisional
Probab=30.09 E-value=60 Score=32.20 Aligned_cols=39 Identities=26% Similarity=0.371 Sum_probs=25.9
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHC---CCeEEEEEecCCC
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN---GHRVMTIAPRYDQ 130 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~---Gh~V~vitp~~~~ 130 (502)
||||..+.+-. ..-| +..|.++|.+. |++|+|++|...+
T Consensus 1 M~ILlTNDDGI---~a~G----l~aL~~~l~~~~~~~~~V~VVAP~~eq 42 (261)
T PRK13931 1 MRILITNDDGI---NAPG----LEVLEQIATELAGPDGEVWTVAPAFEQ 42 (261)
T ss_pred CeEEEEcCCCC---CCHh----HHHHHHHHHHhccCCCeEEEEeCCCCC
Confidence 79999887522 1223 45566666664 4799999997543
No 271
>PRK11670 antiporter inner membrane protein; Provisional
Probab=29.97 E-value=64 Score=33.65 Aligned_cols=36 Identities=36% Similarity=0.451 Sum_probs=26.7
Q ss_pred CceEEEEeeeccCccccccHHHH--HhhhHHHHHHCCCeEEEEE
Q 010752 84 GLNILFVGTEVAPWSKTGGLGDV--LGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~~~--v~~La~aLa~~Gh~V~vit 125 (502)
.++|+-|++ ..||.|+. ..+||.+|++.|++|-++=
T Consensus 106 ~~~vIaV~S------~KGGVGKTT~avNLA~aLA~~G~rVlLID 143 (369)
T PRK11670 106 VKNIIAVSS------GKGGVGKSSTAVNLALALAAEGAKVGILD 143 (369)
T ss_pred CCEEEEEeC------CCCCCCHHHHHHHHHHHHHHCCCcEEEEe
Confidence 356666664 35776654 5569999999999998884
No 272
>PRK05647 purN phosphoribosylglycinamide formyltransferase; Reviewed
Probab=29.70 E-value=1.6e+02 Score=27.77 Aligned_cols=34 Identities=21% Similarity=0.313 Sum_probs=23.6
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCC--CeEEEEEec
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG--HRVMTIAPR 127 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~G--h~V~vitp~ 127 (502)
|||+++.+ |-+.....+.+++.+.+ ++|.++.+.
T Consensus 2 ~ki~vl~s---------g~gs~~~~ll~~~~~~~~~~~I~~vvs~ 37 (200)
T PRK05647 2 KRIVVLAS---------GNGSNLQAIIDACAAGQLPAEIVAVISD 37 (200)
T ss_pred ceEEEEEc---------CCChhHHHHHHHHHcCCCCcEEEEEEec
Confidence 89999986 22446778888888765 677665443
No 273
>COG4007 Predicted dehydrogenase related to H2-forming N5,N10-methylenetetrahydromethanopterin dehydrogenase [General function prediction only]
Probab=29.67 E-value=36 Score=33.60 Aligned_cols=32 Identities=31% Similarity=0.600 Sum_probs=24.3
Q ss_pred cccHHHHHhhhHHHHHHCCCeEEEEEecCCCCccc-cC
Q 010752 100 TGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDA-WD 136 (502)
Q Consensus 100 ~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~~~~-~~ 136 (502)
.||.. +|-.+++.||+|.+.-|..+-..+. |+
T Consensus 31 yGGa~-----mAiefAeAGHDVVLaePn~d~~dd~~w~ 63 (340)
T COG4007 31 YGGAR-----MAIEFAEAGHDVVLAEPNRDIMDDEHWK 63 (340)
T ss_pred CCchH-----HHHHHHHcCCcEEeecCCccccCHHHHH
Confidence 48865 6677999999999888887665554 53
No 274
>COG1553 DsrE Uncharacterized conserved protein involved in intracellular sulfur reduction [Inorganic ion transport and metabolism]
Probab=29.41 E-value=1.1e+02 Score=26.75 Aligned_cols=38 Identities=18% Similarity=0.141 Sum_probs=27.1
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCC-CeEEEEE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-HRVMTIA 125 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~G-h~V~vit 125 (502)
||+.++... +||.+. -......+|+++.+.| ++|.++-
T Consensus 1 m~~~Ivvt~-ppYg~q--~a~~A~~fA~all~~gh~~v~iFl 39 (126)
T COG1553 1 MKYTIVVTG-PPYGTE--SAFSALRFAEALLEQGHELVRLFL 39 (126)
T ss_pred CeEEEEEec-CCCccH--HHHHHHHHHHHHHHcCCeEEEEEE
Confidence 788888875 776222 2345678999999997 6676664
No 275
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=29.20 E-value=75 Score=29.85 Aligned_cols=33 Identities=27% Similarity=0.493 Sum_probs=23.5
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
|+|++.+. .||+| ..+++.|+++||+|.++...
T Consensus 6 ~~ilItGa-------sg~iG---~~l~~~l~~~g~~v~~~~r~ 38 (246)
T PRK05653 6 KTALVTGA-------SRGIG---RAIALRLAADGAKVVIYDSN 38 (246)
T ss_pred CEEEEECC-------CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 56766654 47776 55888899999998666543
No 276
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=29.07 E-value=69 Score=33.19 Aligned_cols=34 Identities=24% Similarity=0.285 Sum_probs=25.2
Q ss_pred CCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEe
Q 010752 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 83 ~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp 126 (502)
.+|||++.+ |.|-+=..|+..|.++||+|..+.-
T Consensus 20 ~~~~IlVtG----------gtGfIG~~l~~~L~~~G~~V~~v~r 53 (370)
T PLN02695 20 EKLRICITG----------AGGFIASHIARRLKAEGHYIIASDW 53 (370)
T ss_pred CCCEEEEEC----------CccHHHHHHHHHHHhCCCEEEEEEe
Confidence 468988664 3343446689999999999988863
No 277
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=28.98 E-value=61 Score=30.22 Aligned_cols=30 Identities=33% Similarity=0.514 Sum_probs=20.4
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vit 125 (502)
|||+.++..| =| .-+|..|++.||+|..+-
T Consensus 1 M~I~ViGlGy------vG-----l~~A~~lA~~G~~V~g~D 30 (185)
T PF03721_consen 1 MKIAVIGLGY------VG-----LPLAAALAEKGHQVIGVD 30 (185)
T ss_dssp -EEEEE--ST------TH-----HHHHHHHHHTTSEEEEE-
T ss_pred CEEEEECCCc------ch-----HHHHHHHHhCCCEEEEEe
Confidence 8999998754 22 237888999999998873
No 278
>PRK06753 hypothetical protein; Provisional
Probab=28.63 E-value=49 Score=33.93 Aligned_cols=30 Identities=30% Similarity=0.561 Sum_probs=23.1
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vit 125 (502)
|+|++|+. .| +|+. +|.+|+++|++|.|+=
T Consensus 1 ~~V~IvGg--G~----aGl~-----~A~~L~~~g~~v~v~E 30 (373)
T PRK06753 1 MKIAIIGA--GI----GGLT-----AAALLQEQGHEVKVFE 30 (373)
T ss_pred CEEEEECC--CH----HHHH-----HHHHHHhCCCcEEEEe
Confidence 78999986 23 5544 6778999999998874
No 279
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=28.56 E-value=1.5e+02 Score=32.73 Aligned_cols=24 Identities=29% Similarity=0.259 Sum_probs=19.4
Q ss_pred HHHHhhhHHHHHHCCCeEEEEEec
Q 010752 104 GDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 104 ~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
+.+-..+++.|.++||+|.++-.+
T Consensus 426 G~~G~~la~~L~~~g~~vvvId~d 449 (558)
T PRK10669 426 GRVGSLLGEKLLAAGIPLVVIETS 449 (558)
T ss_pred ChHHHHHHHHHHHCCCCEEEEECC
Confidence 445577999999999999998654
No 280
>PRK10818 cell division inhibitor MinD; Provisional
Probab=28.42 E-value=77 Score=30.99 Aligned_cols=28 Identities=25% Similarity=0.500 Sum_probs=21.6
Q ss_pred cccHHH--HHhhhHHHHHHCCCeEEEEEec
Q 010752 100 TGGLGD--VLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 100 ~GG~~~--~v~~La~aLa~~Gh~V~vitp~ 127 (502)
.||+|+ ...+||.+|+++|++|.++=..
T Consensus 11 KGGvGKTt~a~nlA~~la~~g~~vllvD~D 40 (270)
T PRK10818 11 KGGVGKTTSSAAIATGLAQKGKKTVVIDFD 40 (270)
T ss_pred CCCCcHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 466554 5667999999999999888543
No 281
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=28.12 E-value=42 Score=34.80 Aligned_cols=21 Identities=33% Similarity=0.409 Sum_probs=18.2
Q ss_pred HhhhHHHHHHCCCeEEEEEec
Q 010752 107 LGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 107 v~~La~aLa~~Gh~V~vitp~ 127 (502)
+..||++|+++||+|+++++.
T Consensus 12 ~l~lA~~L~~~Gh~V~~~~~~ 32 (392)
T TIGR01426 12 TLGVVEELVARGHRVTYATTE 32 (392)
T ss_pred cHHHHHHHHhCCCeEEEEeCH
Confidence 356899999999999999874
No 282
>PF07015 VirC1: VirC1 protein; InterPro: IPR009744 This family consists of several bacterial VirC1 proteins. In Agrobacterium tumefaciens, a cis-active 24-base-pair sequence adjacent to the right border of the T-DNA, called overdrive, stimulates tumour formation by increasing the level of T-DNA processing. It is thought that the virC operon, which enhances T-DNA processing probably, does so because the VirC1 protein interacts with overdrive. It has now been shown that the virC1 gene product binds to overdrive but not to the right border of T-DNA [].
Probab=28.03 E-value=73 Score=30.99 Aligned_cols=36 Identities=36% Similarity=0.505 Sum_probs=25.5
Q ss_pred cccHHHH--HhhhHHHHHHCCCeEEEEEecCCCCcccc
Q 010752 100 TGGLGDV--LGGLPPALAANGHRVMTIAPRYDQYKDAW 135 (502)
Q Consensus 100 ~GG~~~~--v~~La~aLa~~Gh~V~vitp~~~~~~~~~ 135 (502)
.||.|+- +..||.+|+++|-+|.+|=...-+....|
T Consensus 10 KGGaGKTT~~~~LAs~la~~G~~V~lIDaDpn~pl~~W 47 (231)
T PF07015_consen 10 KGGAGKTTAAMALASELAARGARVALIDADPNQPLAKW 47 (231)
T ss_pred CCCCcHHHHHHHHHHHHHHCCCeEEEEeCCCCCcHHHH
Confidence 5777664 45599999999999999965443333344
No 283
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=27.96 E-value=30 Score=30.27 Aligned_cols=35 Identities=34% Similarity=0.475 Sum_probs=24.3
Q ss_pred cCCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 82 ~~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
...|||.+|+.- + +-..|+.+|.+.||+|.-+..+
T Consensus 8 ~~~l~I~iIGaG-----r------VG~~La~aL~~ag~~v~~v~sr 42 (127)
T PF10727_consen 8 AARLKIGIIGAG-----R------VGTALARALARAGHEVVGVYSR 42 (127)
T ss_dssp ----EEEEECTS-----C------CCCHHHHHHHHTTSEEEEESSC
T ss_pred CCccEEEEECCC-----H------HHHHHHHHHHHCCCeEEEEEeC
Confidence 346999999861 2 2366999999999999887543
No 284
>PRK05723 flavodoxin; Provisional
Probab=27.79 E-value=93 Score=27.99 Aligned_cols=35 Identities=17% Similarity=0.176 Sum_probs=28.8
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTI 124 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vi 124 (502)
|||.++.. +.+|-.+.+...++..|.+.|++|.++
T Consensus 1 ~~i~I~yg-----S~tG~ae~~A~~la~~l~~~g~~~~~~ 35 (151)
T PRK05723 1 MKVAILSG-----SVYGTAEEVARHAESLLKAAGFEAWHN 35 (151)
T ss_pred CeEEEEEE-----cCchHHHHHHHHHHHHHHHCCCceeec
Confidence 67777744 368889999999999999999999875
No 285
>PRK13886 conjugal transfer protein TraL; Provisional
Probab=27.70 E-value=79 Score=30.96 Aligned_cols=36 Identities=22% Similarity=0.386 Sum_probs=26.8
Q ss_pred ceEEEEeeeccCccccccHHHHH--hhhHHHHHHCCCeEEEEEe
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVL--GGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v--~~La~aLa~~Gh~V~vitp 126 (502)
++|.+|.. ..||+|+.. ..|+.+|+++|.+|.++-.
T Consensus 2 ~~i~~i~~------~KGGvGKSt~a~~la~~l~~~g~~vl~iD~ 39 (241)
T PRK13886 2 AKIHMVLQ------GKGGVGKSFIAATIAQYKASKGQKPLCIDT 39 (241)
T ss_pred CeEEEEec------CCCCCcHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 56777775 357776654 6689999999999988743
No 286
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=27.68 E-value=5.6e+02 Score=25.47 Aligned_cols=80 Identities=8% Similarity=-0.093 Sum_probs=55.3
Q ss_pred CCCcEEEEE-cCcccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEee--cChHHHHHHHHh
Q 010752 400 RNIPVIGFI-GRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK--FNIPLAHMIIAG 476 (502)
Q Consensus 400 ~~~p~i~~i-Grl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~--~~~~~~~~ila~ 476 (502)
.+.|++++. -....+.|++.+++.+++. .+.=+++=+-+.+..+.+.+..++++-..++++. .+.+.+..+...
T Consensus 93 ~~~Pivlm~Y~Npi~~~Gie~F~~~~~~~---GvdGlivpDLP~ee~~~~~~~~~~~gi~~I~lvaPtt~~~rl~~i~~~ 169 (265)
T COG0159 93 VKVPIVLMTYYNPIFNYGIEKFLRRAKEA---GVDGLLVPDLPPEESDELLKAAEKHGIDPIFLVAPTTPDERLKKIAEA 169 (265)
T ss_pred CCCCEEEEEeccHHHHhhHHHHHHHHHHc---CCCEEEeCCCChHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHh
Confidence 356665443 5666899999999988775 5555666666666677788888888855555553 345777888888
Q ss_pred cCEEEE
Q 010752 477 ADFILI 482 (502)
Q Consensus 477 ADi~l~ 482 (502)
++-|+.
T Consensus 170 a~GFiY 175 (265)
T COG0159 170 ASGFIY 175 (265)
T ss_pred CCCcEE
Confidence 854443
No 287
>PRK13705 plasmid-partitioning protein SopA; Provisional
Probab=27.44 E-value=84 Score=33.02 Aligned_cols=36 Identities=25% Similarity=0.274 Sum_probs=26.9
Q ss_pred CceEEEEeeeccCccccccHHHH--HhhhHHHHHHCCCeEEEEE
Q 010752 84 GLNILFVGTEVAPWSKTGGLGDV--LGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~~~--v~~La~aLa~~Gh~V~vit 125 (502)
.++|+-|++ ..||+|+- ..+||.+|+.+|++|-+|=
T Consensus 105 ~~~vIai~n------~KGGVGKTT~a~nLA~~LA~~G~rVLlID 142 (388)
T PRK13705 105 FPPVIGVAA------HKGGVYKTSVSVHLAQDLALKGLRVLLVE 142 (388)
T ss_pred CCeEEEEEC------CCCCchHHHHHHHHHHHHHhcCCCeEEEc
Confidence 356665554 35888775 4679999999999998883
No 288
>PRK06849 hypothetical protein; Provisional
Probab=27.44 E-value=76 Score=33.06 Aligned_cols=35 Identities=20% Similarity=0.300 Sum_probs=27.0
Q ss_pred CCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 83 ~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
.+|+|++++... | ....++++|.+.||+|.++...
T Consensus 3 ~~~~VLI~G~~~-~---------~~l~iar~l~~~G~~Vi~~d~~ 37 (389)
T PRK06849 3 TKKTVLITGARA-P---------AALELARLFHNAGHTVILADSL 37 (389)
T ss_pred CCCEEEEeCCCc-H---------HHHHHHHHHHHCCCEEEEEeCC
Confidence 468999987642 1 4567999999999999988654
No 289
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=27.43 E-value=92 Score=30.12 Aligned_cols=36 Identities=33% Similarity=0.495 Sum_probs=28.1
Q ss_pred CCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 83 ~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
+..+|++.+. ..||+| ..|+..+++.|+.|...+.+
T Consensus 6 ~~k~VlItgc------s~GGIG---~ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 6 QPKKVLITGC------SSGGIG---YALAKEFARNGYLVYATARR 41 (289)
T ss_pred CCCeEEEeec------CCcchh---HHHHHHHHhCCeEEEEEccc
Confidence 3457777775 469998 67999999999999776544
No 290
>CHL00175 minD septum-site determining protein; Validated
Probab=27.38 E-value=1.1e+02 Score=30.28 Aligned_cols=35 Identities=29% Similarity=0.436 Sum_probs=26.1
Q ss_pred ceEEEEeeeccCccccccHH--HHHhhhHHHHHHCCCeEEEEE
Q 010752 85 LNILFVGTEVAPWSKTGGLG--DVLGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~--~~v~~La~aLa~~Gh~V~vit 125 (502)
+||+.|++ ..||+| .+..+||.+|++.|++|.++=
T Consensus 15 ~~vi~v~s------~KGGvGKTt~a~nLA~~La~~g~~vlliD 51 (281)
T CHL00175 15 SRIIVITS------GKGGVGKTTTTANLGMSIARLGYRVALID 51 (281)
T ss_pred ceEEEEEc------CCCCCcHHHHHHHHHHHHHhCCCeEEEEe
Confidence 46666665 246555 456789999999999998884
No 291
>PRK07364 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=27.33 E-value=59 Score=33.91 Aligned_cols=38 Identities=29% Similarity=0.374 Sum_probs=26.9
Q ss_pred eeeeccCCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEE
Q 010752 77 LMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 77 ~~~~~~~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vit 125 (502)
.++.....++|++|+. .| +|+. +|.+|++.|++|.|+=
T Consensus 11 ~~~~~~~~~dV~IvGa--G~----aGl~-----~A~~L~~~G~~v~v~E 48 (415)
T PRK07364 11 LPSTRSLTYDVAIVGG--GI----VGLT-----LAAALKDSGLRIALIE 48 (415)
T ss_pred CCCCCccccCEEEECc--CH----HHHH-----HHHHHhcCCCEEEEEe
Confidence 3333344579999986 23 5554 6777999999999984
No 292
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=27.10 E-value=79 Score=30.45 Aligned_cols=32 Identities=25% Similarity=0.472 Sum_probs=24.1
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEe
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp 126 (502)
|+|++.+. .||+| ..+++.|+++|++|.++..
T Consensus 1 m~vlItGa-------s~gIG---~aia~~l~~~G~~V~~~~r 32 (259)
T PRK08340 1 MNVLVTAS-------SRGIG---FNVARELLKKGARVVISSR 32 (259)
T ss_pred CeEEEEcC-------CcHHH---HHHHHHHHHcCCEEEEEeC
Confidence 67777664 36776 5588999999999877754
No 293
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=27.02 E-value=85 Score=30.17 Aligned_cols=31 Identities=29% Similarity=0.322 Sum_probs=22.7
Q ss_pred ccHHHHHhhhHHHHHHCCCeEEEEEecCCCC
Q 010752 101 GGLGDVLGGLPPALAANGHRVMTIAPRYDQY 131 (502)
Q Consensus 101 GG~~~~v~~La~aLa~~Gh~V~vitp~~~~~ 131 (502)
||.|.+=..+++.|.++||+|.+++.+....
T Consensus 7 GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~ 37 (275)
T COG0702 7 GATGFVGGAVVRELLARGHEVRAAVRNPEAA 37 (275)
T ss_pred ecccchHHHHHHHHHhCCCEEEEEEeCHHHH
Confidence 3334344678899999999999998875443
No 294
>PRK05693 short chain dehydrogenase; Provisional
Probab=26.96 E-value=86 Score=30.50 Aligned_cols=34 Identities=24% Similarity=0.446 Sum_probs=23.7
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
||.+.|+- -.||+| ..+++.|+++|++|.+++.+
T Consensus 1 mk~vlItG------asggiG---~~la~~l~~~G~~V~~~~r~ 34 (274)
T PRK05693 1 MPVVLITG------CSSGIG---RALADAFKAAGYEVWATARK 34 (274)
T ss_pred CCEEEEec------CCChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 45555553 247777 45788899999999877543
No 295
>PRK13236 nitrogenase reductase; Reviewed
Probab=26.68 E-value=81 Score=31.66 Aligned_cols=35 Identities=20% Similarity=0.391 Sum_probs=26.6
Q ss_pred CceEEEEeeeccCccccccHHHHH--hhhHHHHHHCCCeEEEEE
Q 010752 84 GLNILFVGTEVAPWSKTGGLGDVL--GGLPPALAANGHRVMTIA 125 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~~~v--~~La~aLa~~Gh~V~vit 125 (502)
.|+++-++ ..||+|+-. .+||.+|+++|++|-++-
T Consensus 5 ~~~~~~~~-------GKGGVGKTt~a~NLA~~La~~G~rVLliD 41 (296)
T PRK13236 5 NIRQIAFY-------GKGGIGKSTTSQNTLAAMAEMGQRILIVG 41 (296)
T ss_pred CceEEEEE-------CCCcCCHHHHHHHHHHHHHHCCCcEEEEE
Confidence 46665553 358887655 669999999999999984
No 296
>PF13614 AAA_31: AAA domain; PDB: 2VED_B 2PH1_A 3EA0_B 3FKQ_A 3KB1_B 1ION_A 3LA6_H 3BFV_B 3CIO_D.
Probab=26.64 E-value=1.1e+02 Score=26.81 Aligned_cols=28 Identities=29% Similarity=0.283 Sum_probs=21.8
Q ss_pred cccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 100 ~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
..|.+.....||..|++.|++|.++-..
T Consensus 11 g~G~t~~a~~lA~~la~~~~~Vllid~~ 38 (157)
T PF13614_consen 11 GVGKTTLALNLAAALARKGKKVLLIDFD 38 (157)
T ss_dssp TSSHHHHHHHHHHHHHHTTT-EEEEE--
T ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEECC
Confidence 4688889999999999999998887543
No 297
>PRK05583 ribosomal protein L7Ae family protein; Provisional
Probab=26.50 E-value=3.9e+02 Score=22.42 Aligned_cols=77 Identities=10% Similarity=0.096 Sum_probs=53.0
Q ss_pred CHHHHHHHHhhcccCCeEEEEEeC-CChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCEEEEcCCCCCCcHHHH
Q 010752 416 GSDILAAAIPHFIKENVQIIVLGT-GKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQL 494 (502)
Q Consensus 416 G~d~ll~Al~~L~~~~v~lvivG~-g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi~l~PS~~E~fglv~l 494 (502)
|.+.+++++.. ..+++||+-. ..+...+.++.+...+. +.++..++.+++...+-...+.++.-.-++|.-.++
T Consensus 21 G~~~v~~aik~---gk~~lVI~A~D~s~~~kkki~~~~~~~~--vp~~~~~t~~eLg~a~Gk~~~~~iai~d~g~a~~l~ 95 (104)
T PRK05583 21 GYNKCEEAIKK---KKVYLIIISNDISENSKNKFKNYCNKYN--IPYIEGYSKEELGNAIGRDEIKILGVKDKNMAKKLL 95 (104)
T ss_pred cHHHHHHHHHc---CCceEEEEeCCCCHhHHHHHHHHHHHcC--CCEEEecCHHHHHHHhCCCCeEEEEEeChHHHHHHH
Confidence 67777888765 4678887765 45556677777777655 555555788888888887666666655667777766
Q ss_pred HHH
Q 010752 495 HAM 497 (502)
Q Consensus 495 EAm 497 (502)
+.+
T Consensus 96 ~~~ 98 (104)
T PRK05583 96 KLW 98 (104)
T ss_pred HHH
Confidence 654
No 298
>PLN02712 arogenate dehydrogenase
Probab=26.48 E-value=1.1e+02 Score=34.80 Aligned_cols=35 Identities=29% Similarity=0.455 Sum_probs=26.4
Q ss_pred cCCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 82 ~~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
.++|+|++|+. |.+| ..++.+|.+.||+|.++...
T Consensus 50 ~~~~kIgIIG~--------G~mG---~slA~~L~~~G~~V~~~dr~ 84 (667)
T PLN02712 50 TTQLKIAIIGF--------GNYG---QFLAKTLISQGHTVLAHSRS 84 (667)
T ss_pred CCCCEEEEEcc--------CHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 45689999984 4444 45889999999999887653
No 299
>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase. Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.
Probab=26.35 E-value=1.3e+02 Score=28.33 Aligned_cols=39 Identities=21% Similarity=0.205 Sum_probs=25.2
Q ss_pred CceEEEEeeeccCccccccHHHHHhhhHHHHHH-CCCeEEEEEe
Q 010752 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA-NGHRVMTIAP 126 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~-~Gh~V~vitp 126 (502)
.||++.|++.- .--|-..+...||.+|++ .|++|.++-.
T Consensus 34 ~~~vi~v~s~k----gG~GkSt~a~nLA~~la~~~g~~VLlvD~ 73 (207)
T TIGR03018 34 NNNLIMVTSSL----PGEGKSFTAINLAISLAQEYDKTVLLIDA 73 (207)
T ss_pred CCeEEEEECCC----CCCCHHHHHHHHHHHHHHhcCCeEEEEEC
Confidence 35655555411 113455566779999997 6999998843
No 300
>PRK08163 salicylate hydroxylase; Provisional
Probab=26.21 E-value=65 Score=33.35 Aligned_cols=32 Identities=34% Similarity=0.435 Sum_probs=24.6
Q ss_pred CCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEE
Q 010752 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 83 ~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vit 125 (502)
..++|++|+. .| +|+. +|.+|++.|++|+|+=
T Consensus 3 ~~~~V~IvGa--Gi----aGl~-----~A~~L~~~g~~v~v~E 34 (396)
T PRK08163 3 KVTPVLIVGG--GI----GGLA-----AALALARQGIKVKLLE 34 (396)
T ss_pred CCCeEEEECC--cH----HHHH-----HHHHHHhCCCcEEEEe
Confidence 4579999996 23 5654 6777999999999883
No 301
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=26.01 E-value=2.8e+02 Score=29.09 Aligned_cols=94 Identities=13% Similarity=0.053 Sum_probs=55.7
Q ss_pred HHHHHHHHHHhCCCCCCCCcEEEEEcCcccccC-HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHH--------H
Q 010752 384 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKG-SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEI--------L 454 (502)
Q Consensus 384 ~~~k~~l~~~~gl~~~~~~p~i~~iGrl~~~KG-~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~--------~ 454 (502)
+..++++.+++|++...+.-..+++ +.+.+. +..++++++... +.+.++|-++.. ...++.+-. .
T Consensus 165 ~~~~~~~~~~lg~~~~~~~~~~vsl--F~Ye~~~l~~ll~~~~~~~-~pv~llvp~g~~---~~~~~~~~~~~~~~~g~~ 238 (374)
T PF10093_consen 165 PAARAAFLRRLGLPEPEPGALRVSL--FCYENAALASLLDAWAASP-KPVHLLVPEGRA---LNSLAAWLGDALLQAGDS 238 (374)
T ss_pred HHHHHHHHHHcCCCCCCCCCeEEEE--EeCCchHHHHHHHHHhcCC-CCeEEEecCCcc---HHHHHHHhccccccCccc
Confidence 3457888899998632222233333 445555 888999998652 456666665432 222222111 0
Q ss_pred C-CC--ceEEEeecChHHHHHHHHhcCEEEEc
Q 010752 455 Y-PE--KARGVAKFNIPLAHMIIAGADFILIP 483 (502)
Q Consensus 455 ~-~~--~v~~~~~~~~~~~~~ila~ADi~l~P 483 (502)
. .+ .+......+.+..+.+|-.||+-++=
T Consensus 239 ~~~g~l~l~~lPF~~Q~~yD~LLw~cD~NfVR 270 (374)
T PF10093_consen 239 WQRGNLTLHVLPFVPQDDYDRLLWACDFNFVR 270 (374)
T ss_pred cccCCeEEEECCCCCHHHHHHHHHhCccceEe
Confidence 1 12 34445556788899999999998873
No 302
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=26.00 E-value=93 Score=28.04 Aligned_cols=31 Identities=26% Similarity=0.371 Sum_probs=21.7
Q ss_pred CceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEE
Q 010752 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vit 125 (502)
+|||.||+. |- .=..++..|.+.||+|.++-
T Consensus 1 m~~Ig~IGl--------G~---mG~~~a~~L~~~g~~v~~~d 31 (163)
T PF03446_consen 1 MMKIGFIGL--------GN---MGSAMARNLAKAGYEVTVYD 31 (163)
T ss_dssp -BEEEEE----------SH---HHHHHHHHHHHTTTEEEEEE
T ss_pred CCEEEEEch--------HH---HHHHHHHHHHhcCCeEEeec
Confidence 378888885 32 33568899999999998874
No 303
>PRK06180 short chain dehydrogenase; Provisional
Probab=25.93 E-value=95 Score=30.34 Aligned_cols=24 Identities=38% Similarity=0.592 Sum_probs=18.9
Q ss_pred cccHHHHHhhhHHHHHHCCCeEEEEEe
Q 010752 100 TGGLGDVLGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 100 ~GG~~~~v~~La~aLa~~Gh~V~vitp 126 (502)
.||+| ..+++.|+++|++|.++..
T Consensus 13 sggiG---~~la~~l~~~G~~V~~~~r 36 (277)
T PRK06180 13 SSGFG---RALAQAALAAGHRVVGTVR 36 (277)
T ss_pred CChHH---HHHHHHHHhCcCEEEEEeC
Confidence 47777 4577889999999988764
No 304
>PRK07577 short chain dehydrogenase; Provisional
Probab=25.88 E-value=1e+02 Score=28.98 Aligned_cols=34 Identities=38% Similarity=0.544 Sum_probs=23.9
Q ss_pred CceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
.++|++++. +||+| ..+++.|+++|++|.++...
T Consensus 3 ~k~vlItG~-------s~~iG---~~ia~~l~~~G~~v~~~~r~ 36 (234)
T PRK07577 3 SRTVLVTGA-------TKGIG---LALSLRLANLGHQVIGIARS 36 (234)
T ss_pred CCEEEEECC-------CCcHH---HHHHHHHHHCCCEEEEEeCC
Confidence 356665543 46776 45788999999999887643
No 305
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=25.75 E-value=2.7e+02 Score=25.37 Aligned_cols=53 Identities=15% Similarity=0.179 Sum_probs=31.9
Q ss_pred EEcCcccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCce
Q 010752 407 FIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKA 459 (502)
Q Consensus 407 ~iGrl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v 459 (502)
.+|...+.-+.+..-+.+..+.+.+..+|++|=|.+.-|..+.+....++..+
T Consensus 75 i~g~~~g~~~~~~~~~i~~~I~~~~pdiv~vglG~PkQE~~~~~~~~~l~~~v 127 (171)
T cd06533 75 IVGYHHGYFGPEEEEEIIERINASGADILFVGLGAPKQELWIARHKDRLPVPV 127 (171)
T ss_pred EEEecCCCCChhhHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHHHCCCCE
Confidence 44444444444443334444444466778888877767788888888776443
No 306
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=25.56 E-value=64 Score=29.00 Aligned_cols=20 Identities=35% Similarity=0.413 Sum_probs=17.2
Q ss_pred hhhHHHHHHCCCeEEEEEec
Q 010752 108 GGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 108 ~~La~aLa~~Gh~V~vitp~ 127 (502)
..+|..|+.+||+|++++++
T Consensus 12 ~AlA~~la~~g~~V~l~~~~ 31 (157)
T PF01210_consen 12 TALAALLADNGHEVTLWGRD 31 (157)
T ss_dssp HHHHHHHHHCTEEEEEETSC
T ss_pred HHHHHHHHHcCCEEEEEecc
Confidence 45889999999999999764
No 307
>PRK05884 short chain dehydrogenase; Provisional
Probab=25.45 E-value=99 Score=29.22 Aligned_cols=33 Identities=24% Similarity=0.553 Sum_probs=24.0
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
||++..+. .||+| ..+++.|+++|++|.++..+
T Consensus 1 m~vlItGa-------s~giG---~~ia~~l~~~g~~v~~~~r~ 33 (223)
T PRK05884 1 VEVLVTGG-------DTDLG---RTIAEGFRNDGHKVTLVGAR 33 (223)
T ss_pred CeEEEEeC-------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 56665553 36766 55889999999999887543
No 308
>PRK14494 putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/FeS domain-containing protein protein; Provisional
Probab=25.35 E-value=1.1e+02 Score=29.61 Aligned_cols=39 Identities=21% Similarity=0.144 Sum_probs=31.3
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecC
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~ 128 (502)
|+|+.|+.. +-.|-+..+..|+..|.++|++|-++-+..
T Consensus 1 m~vi~ivG~-----~gsGKTtl~~~l~~~L~~~G~~V~viK~~~ 39 (229)
T PRK14494 1 MRAIGVIGF-----KDSGKTTLIEKILKNLKERGYRVATAKHTH 39 (229)
T ss_pred CeEEEEECC-----CCChHHHHHHHHHHHHHhCCCeEEEEEecc
Confidence 677777742 347888899999999999999999996543
No 309
>TIGR01969 minD_arch cell division ATPase MinD, archaeal. This model represents the archaeal branch of the MinD family. MinD, a weak ATPase, works in bacteria with MinC as a generalized cell division inhibitor and, through interaction with MinE, prevents septum placement inappropriate sites. Often several members of this family are found in archaeal genomes, and the function is uncharacterized. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. The exact roles of the various archaeal MinD homologs are unknown.
Probab=25.16 E-value=1.1e+02 Score=29.33 Aligned_cols=27 Identities=33% Similarity=0.585 Sum_probs=20.9
Q ss_pred cccHHH--HHhhhHHHHHHCCCeEEEEEe
Q 010752 100 TGGLGD--VLGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 100 ~GG~~~--~v~~La~aLa~~Gh~V~vitp 126 (502)
.||+|+ ...+||.+|+++|++|.++=.
T Consensus 9 KGGvGKTt~a~~LA~~la~~g~~VlliD~ 37 (251)
T TIGR01969 9 KGGTGKTTITANLGVALAKLGKKVLALDA 37 (251)
T ss_pred CCCCcHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 466655 456699999999999998843
No 310
>TIGR03029 EpsG chain length determinant protein tyrosine kinase EpsG. The proteins in this family are homologs of the EpsG protein found in Methylobacillus strain 12S and are generally found in operons with other Eps homologs. The protein is believed to function as the protein tyrosine kinase component of the chain length regulator (along with the transmembrane component EpsF).
Probab=24.91 E-value=1.3e+02 Score=29.56 Aligned_cols=38 Identities=18% Similarity=0.246 Sum_probs=27.6
Q ss_pred CceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEE
Q 010752 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vit 125 (502)
+.|++.|++. .| .-|-..+..+||.+|++.|++|.+|=
T Consensus 102 ~~~vi~vts~-~~---g~Gktt~a~nLA~~la~~g~~VllID 139 (274)
T TIGR03029 102 GRKALAVVSA-KS---GEGCSYIAANLAIVFSQLGEKTLLID 139 (274)
T ss_pred CCeEEEEECC-CC---CCCHHHHHHHHHHHHHhcCCeEEEEe
Confidence 3455555542 12 35777788999999999999999884
No 311
>PRK07236 hypothetical protein; Provisional
Probab=24.67 E-value=73 Score=33.00 Aligned_cols=32 Identities=25% Similarity=0.306 Sum_probs=24.8
Q ss_pred CCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEE
Q 010752 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 83 ~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vit 125 (502)
..++|++|+.- .+|+. +|.+|++.|++|+|+=
T Consensus 5 ~~~~ViIVGaG------~aGl~-----~A~~L~~~G~~v~v~E 36 (386)
T PRK07236 5 SGPRAVVIGGS------LGGLF-----AALLLRRAGWDVDVFE 36 (386)
T ss_pred CCCeEEEECCC------HHHHH-----HHHHHHhCCCCEEEEe
Confidence 45899999962 25554 7788999999999984
No 312
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=24.48 E-value=1e+02 Score=29.21 Aligned_cols=34 Identities=29% Similarity=0.575 Sum_probs=24.6
Q ss_pred CceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
+++|++++. +||+| ..+++.|.++|++|.++...
T Consensus 5 ~~~vlItGa-------sg~iG---~~l~~~l~~~G~~V~~~~r~ 38 (251)
T PRK07231 5 GKVAIVTGA-------SSGIG---EGIARRFAAEGARVVVTDRN 38 (251)
T ss_pred CcEEEEECC-------CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 356666664 46776 56888999999998777543
No 313
>PRK07308 flavodoxin; Validated
Probab=24.47 E-value=1.1e+02 Score=26.87 Aligned_cols=26 Identities=23% Similarity=0.213 Sum_probs=23.2
Q ss_pred ccccHHHHHhhhHHHHHHCCCeEEEE
Q 010752 99 KTGGLGDVLGGLPPALAANGHRVMTI 124 (502)
Q Consensus 99 ~~GG~~~~v~~La~aLa~~Gh~V~vi 124 (502)
.+|..+.+...++..|.+.|++|.+.
T Consensus 11 ~tGnTe~iA~~ia~~l~~~g~~~~~~ 36 (146)
T PRK07308 11 MTGNTEEIADIVADKLRELGHDVDVD 36 (146)
T ss_pred CCchHHHHHHHHHHHHHhCCCceEEE
Confidence 46999999999999999999998875
No 314
>PLN02256 arogenate dehydrogenase
Probab=24.46 E-value=1.1e+02 Score=31.04 Aligned_cols=35 Identities=29% Similarity=0.432 Sum_probs=26.6
Q ss_pred cCCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 82 ~~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
+.+|+|++|+. |..| +.++.+|.+.|++|.++.++
T Consensus 34 ~~~~kI~IIG~--------G~mG---~slA~~L~~~G~~V~~~d~~ 68 (304)
T PLN02256 34 SRKLKIGIVGF--------GNFG---QFLAKTFVKQGHTVLATSRS 68 (304)
T ss_pred CCCCEEEEEee--------CHHH---HHHHHHHHhCCCEEEEEECc
Confidence 35689999984 4444 35888899999999887655
No 315
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=24.39 E-value=3.2e+02 Score=24.92 Aligned_cols=41 Identities=15% Similarity=0.259 Sum_probs=28.3
Q ss_pred CHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCce
Q 010752 416 GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKA 459 (502)
Q Consensus 416 G~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v 459 (502)
-.+.+++.+.+ .+..+|++|-|.+.-|..+.+....++..+
T Consensus 89 ~~~~i~~~I~~---~~pdiv~vglG~PkQE~~~~~~~~~l~~~v 129 (172)
T PF03808_consen 89 EEEAIINRINA---SGPDIVFVGLGAPKQERWIARHRQRLPAGV 129 (172)
T ss_pred hHHHHHHHHHH---cCCCEEEEECCCCHHHHHHHHHHHHCCCCE
Confidence 34455555544 466778888887777888888888887543
No 316
>TIGR01768 GGGP-family geranylgeranylglyceryl phosphate synthase family protein. This model represents a family of sequences including geranylgeranylglyceryl phosphate synthase which catalyzes the first committed step in the synthesis of ether-linked membrane lipids in archaea. The clade of bacterial sequences may have the same function or a closely related function. This model supercedes TIGR00265, which has been retired.
Probab=24.26 E-value=53 Score=31.79 Aligned_cols=71 Identities=15% Similarity=0.226 Sum_probs=35.5
Q ss_pred cccccC-HHHHHHHHhhcccCCeEEEEEeCCCh----hhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCEEEEcCC
Q 010752 411 LEEQKG-SDILAAAIPHFIKENVQIIVLGTGKK----PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSR 485 (502)
Q Consensus 411 l~~~KG-~d~ll~Al~~L~~~~v~lvivG~g~~----~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi~l~PS~ 485 (502)
|.|.|- .+...+.++++.+...-.+++|.... ..++.++.+. ++. +-... |+.. ...+...||.+++||.
T Consensus 6 iDPdK~~~~~~~~~~~~~~~~gtdai~vGGS~~vt~~~~~~~v~~ik-~~~--lPvil-fp~~-~~~i~~~aDa~l~~sv 80 (223)
T TIGR01768 6 IDPDKTNPSEADEIAKAAAESGTDAILIGGSQGVTYEKTDTLIEALR-RYG--LPIIL-FPSN-PTNVSRDADALFFPSV 80 (223)
T ss_pred ECCCCCCccccHHHHHHHHhcCCCEEEEcCCCcccHHHHHHHHHHHh-ccC--CCEEE-eCCC-ccccCcCCCEEEEEEe
Confidence 455452 23333445555455555667775432 2223333333 333 22222 4432 2346788999999996
Q ss_pred C
Q 010752 486 F 486 (502)
Q Consensus 486 ~ 486 (502)
.
T Consensus 81 l 81 (223)
T TIGR01768 81 L 81 (223)
T ss_pred e
Confidence 4
No 317
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=24.15 E-value=97 Score=31.51 Aligned_cols=32 Identities=31% Similarity=0.320 Sum_probs=24.0
Q ss_pred CceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEE
Q 010752 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vit 125 (502)
+|+|+..+. +|++| ..+++.|.++||+|.++.
T Consensus 4 ~k~ilItGa-------tG~IG---~~l~~~L~~~G~~V~~~~ 35 (349)
T TIGR02622 4 GKKVLVTGH-------TGFKG---SWLSLWLLELGAEVYGYS 35 (349)
T ss_pred CCEEEEECC-------CChhH---HHHHHHHHHCCCEEEEEe
Confidence 467766653 46666 558899999999998775
No 318
>PF00142 Fer4_NifH: 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; InterPro: IPR000392 This entry represents members of the NifH/BchL/ChlL family. Nitrogen fixing bacteria possess a nitrogenase enzyme complex that catalyses the reduction of molecular nitrogen to ammonia [, , ]. The nitrogenase enzyme complex consists of two components: Component I is nitrogenase MoFe protein or dinitrogenase, which contains 2 molecules each of 2 non-identical subunits. Component II is nitrogenase Fe protein or dinitrogenase reductase, which is a homodimer. The monomer is encoded by the nifH gene []. Component II has 2 ATP-binding domains and one 4Fe-4S cluster per homodimer: it supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component I for the reduction of molecular nitrogen to ammonia []. There are a number of conserved regions in the sequence of these proteins: in the N-terminal section there is an ATP-binding site motif 'A' (P-loop) IPR001687 from INTERPRO and in the central section there are two conserved cysteines which have been shown, in nifH, to be the ligands of the 4Fe-4S cluster. Protochlorophyllide reductase is involved in light-independent chlorophyll biosynthesis. The light-independent reaction uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This enzyme complex is composed of three subunits: ChlL, ChlN and ChlB. ChlL is present as a homodimer, and binds one 4Fe-4S cluster per dimer. The conserved domains, including the ATP-binding motif and the Fe-S binding motif found in the three subunits, are similar to those in nitrogenases []. ; GO: 0005524 ATP binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1CP2_A 2AFI_F 1N2C_F 1FP6_C 2AFK_G 1M34_M 1XD8_A 1NIP_A 1M1Y_N 1G21_H ....
Probab=23.99 E-value=80 Score=31.42 Aligned_cols=27 Identities=37% Similarity=0.625 Sum_probs=19.8
Q ss_pred cccHHHH--HhhhHHHHHHCCCeEEEEEe
Q 010752 100 TGGLGDV--LGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 100 ~GG~~~~--v~~La~aLa~~Gh~V~vitp 126 (502)
.||+|+. ..+|+.+|++.|++|..+--
T Consensus 8 KGGIGKST~~~Nlsaala~~G~kVl~iGC 36 (273)
T PF00142_consen 8 KGGIGKSTTASNLSAALAEMGKKVLQIGC 36 (273)
T ss_dssp STTSSHHHHHHHHHHHHHHTT--EEEEEE
T ss_pred CCCcccChhhhHHHHHHHhccceeeEecc
Confidence 4776655 45699999999999999963
No 319
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=23.98 E-value=6e+02 Score=26.97 Aligned_cols=73 Identities=21% Similarity=0.290 Sum_probs=51.7
Q ss_pred EEcCcccccCHHHHHHHHhhcccCCeEEEEEeCCC-----hhhHHHHHHHHHH-CCCceEEEeecC-----hHHHHHHHH
Q 010752 407 FIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-----KPMEKQLEQLEIL-YPEKARGVAKFN-----IPLAHMIIA 475 (502)
Q Consensus 407 ~iGrl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~-----~~~~~~l~~l~~~-~~~~v~~~~~~~-----~~~~~~ila 475 (502)
|.|+..+-+-..+..+.+.+++++++.+||+.+.. ..+-+++.+..+. -|+++.++..-. .+++.++=.
T Consensus 159 ~ygsyte~dpv~ia~egv~~fKke~fdvIIvDTSGRh~qe~sLfeEM~~v~~ai~Pd~vi~VmDasiGQaae~Qa~aFk~ 238 (483)
T KOG0780|consen 159 FYGSYTEADPVKIASEGVDRFKKENFDVIIVDTSGRHKQEASLFEEMKQVSKAIKPDEIIFVMDASIGQAAEAQARAFKE 238 (483)
T ss_pred eEecccccchHHHHHHHHHHHHhcCCcEEEEeCCCchhhhHHHHHHHHHHHhhcCCCeEEEEEeccccHhHHHHHHHHHH
Confidence 77899999999999999999999999999998743 1233444444443 367788877644 244555555
Q ss_pred hcCE
Q 010752 476 GADF 479 (502)
Q Consensus 476 ~ADi 479 (502)
..|+
T Consensus 239 ~vdv 242 (483)
T KOG0780|consen 239 TVDV 242 (483)
T ss_pred hhcc
Confidence 5665
No 320
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=23.84 E-value=2.2e+02 Score=26.96 Aligned_cols=105 Identities=24% Similarity=0.362 Sum_probs=0.0
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHC---CCeEEEEEecCCCCccccCCceEEEEEeCCeeeEEEEEEEeecC
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN---GHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~---Gh~V~vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (502)
|||+.+.+ |-|.-+..+..+...- +.-+.|++-+.+-+--. +..+.|
T Consensus 1 ~ki~VlaS---------G~GSNlqaiida~~~~~~~a~i~~Visd~~~A~~le---------------------rA~~~g 50 (200)
T COG0299 1 KKIAVLAS---------GNGSNLQAIIDAIKGGKLDAEIVAVISDKADAYALE---------------------RAAKAG 50 (200)
T ss_pred CeEEEEEe---------CCcccHHHHHHHHhcCCCCcEEEEEEeCCCCCHHHH---------------------HHHHcC
Q ss_pred ceEEEEeCCcccccccCCCCCcccCCCCCCCCcchHHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCEEEEEcCCccch
Q 010752 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSL 241 (502)
Q Consensus 162 v~v~~i~~p~~~~~~~~~~~~~~y~~~~g~~~~~~~~r~~~~~~a~~~~~~~l~~~~~~~~~~~~~pDvVih~h~~~t~~ 241 (502)
|+.+.+++..|-.| ..+-+++.+.++.. +|| +|.+-.|+..+
T Consensus 51 Ipt~~~~~k~~~~r-------------------------~~~d~~l~~~l~~~------------~~d-lvvLAGyMrIL 92 (200)
T COG0299 51 IPTVVLDRKEFPSR-------------------------EAFDRALVEALDEY------------GPD-LVVLAGYMRIL 92 (200)
T ss_pred CCEEEeccccCCCH-------------------------HHHHHHHHHHHHhc------------CCC-EEEEcchHHHc
Q ss_pred HHHHHHHhccCCCCcCCCeEEEEEe
Q 010752 242 IPCYLKTMYKPKGMYKSAKVVFCIH 266 (502)
Q Consensus 242 ~~~~lk~~~~~~~~~~~~pvv~tiH 266 (502)
.|.++.. |.+. +..+|
T Consensus 93 ~~~fl~~-------~~gr--IlNIH 108 (200)
T COG0299 93 GPEFLSR-------FEGR--ILNIH 108 (200)
T ss_pred CHHHHHH-------hhcc--eEecC
No 321
>PF01081 Aldolase: KDPG and KHG aldolase; InterPro: IPR000887 4-Hydroxy-2-oxoglutarate aldolase (4.1.3.16 from EC) (KHG-aldolase) catalyzes the interconversion of 4-hydroxy-2-oxoglutarate into pyruvate and glyoxylate. Phospho-2-dehydro-3-deoxygluconate aldolase (4.1.2.14 from EC) (KDPG-aldolase) catalyzes the interconversion of 6-phospho-2-dehydro-3-deoxy-D-gluconate into pyruvate and glyceraldehyde 3-phosphate. These two enzymes are structurally and functionally related []. They are both homotrimeric proteins of approximately 220 amino-acid residues. They are class I aldolases whose catalytic mechanism involves the formation of a Schiff-base intermediate between the substrate and the epsilon-amino group of a lysine residue. In both enzymes, an arginine is required for catalytic activity.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VCR_A 1FQ0_A 1EUN_A 1EUA_B 1FWR_A 2C0A_B 1WBH_A 1WAU_A 2YW3_B 2YW4_A ....
Probab=23.82 E-value=5.3e+02 Score=24.32 Aligned_cols=70 Identities=20% Similarity=0.256 Sum_probs=37.0
Q ss_pred HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeec-ChHHHH-HHHHhcCEEEEcCCC
Q 010752 417 SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAH-MIIAGADFILIPSRF 486 (502)
Q Consensus 417 ~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~~-~ila~ADi~l~PS~~ 486 (502)
.+..++.++.|.+..++++=+--..+.-.+.++.+.+++++-+.+.+.. +.+++. .+-++|++++-|...
T Consensus 19 ~~~a~~~~~al~~gGi~~iEiT~~t~~a~~~I~~l~~~~p~~~vGAGTV~~~e~a~~a~~aGA~FivSP~~~ 90 (196)
T PF01081_consen 19 PEDAVPIAEALIEGGIRAIEITLRTPNALEAIEALRKEFPDLLVGAGTVLTAEQAEAAIAAGAQFIVSPGFD 90 (196)
T ss_dssp GGGHHHHHHHHHHTT--EEEEETTSTTHHHHHHHHHHHHTTSEEEEES--SHHHHHHHHHHT-SEEEESS--
T ss_pred HHHHHHHHHHHHHCCCCEEEEecCCccHHHHHHHHHHHCCCCeeEEEeccCHHHHHHHHHcCCCEEECCCCC
Confidence 3444444444444455555444333445666777777777655666654 344443 577788888888654
No 322
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=23.79 E-value=4.8e+02 Score=23.87 Aligned_cols=65 Identities=8% Similarity=0.019 Sum_probs=37.7
Q ss_pred HHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCEEEEcCCC
Q 010752 420 LAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRF 486 (502)
Q Consensus 420 ll~Al~~L~~--~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi~l~PS~~ 486 (502)
.++.++++.. .+-+++|+|.|.--.....+.|.+ .+-++....+ ..+++.+.+..||+++.....
T Consensus 31 ~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~-~g~~V~v~~r-~~~~l~~~l~~aDiVIsat~~ 97 (168)
T cd01080 31 ILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLN-RNATVTVCHS-KTKNLKEHTKQADIVIVAVGK 97 (168)
T ss_pred HHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhh-CCCEEEEEEC-CchhHHHHHhhCCEEEEcCCC
Confidence 4444444432 467899999986211223333433 2323444443 335566899999999988755
No 323
>PRK06179 short chain dehydrogenase; Provisional
Probab=23.73 E-value=1.1e+02 Score=29.48 Aligned_cols=25 Identities=28% Similarity=0.453 Sum_probs=19.7
Q ss_pred cccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 100 ~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
+||+| ..+++.|+++|++|.+++.+
T Consensus 13 sg~iG---~~~a~~l~~~g~~V~~~~r~ 37 (270)
T PRK06179 13 SSGIG---RATAEKLARAGYRVFGTSRN 37 (270)
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 47776 56889999999999887643
No 324
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=23.41 E-value=1.1e+02 Score=32.81 Aligned_cols=29 Identities=24% Similarity=0.401 Sum_probs=24.7
Q ss_pred ccHHHHHhhhHHHHHHCCCeEEEEEecCC
Q 010752 101 GGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (502)
Q Consensus 101 GG~~~~v~~La~aLa~~Gh~V~vitp~~~ 129 (502)
.|--..+..++..|+++||.|+++++...
T Consensus 16 ~sH~~~~~~la~~L~~~gh~vt~~~~~~~ 44 (496)
T KOG1192|consen 16 QSHLNPMLQLAKRLAERGHNVTVVTPSFN 44 (496)
T ss_pred ccHHHHHHHHHHHHHHcCCceEEEEeech
Confidence 56666889999999999999999987643
No 325
>PRK02122 glucosamine-6-phosphate deaminase-like protein; Validated
Probab=23.26 E-value=1.7e+02 Score=33.13 Aligned_cols=40 Identities=18% Similarity=0.219 Sum_probs=28.8
Q ss_pred CceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCC
Q 010752 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~ 129 (502)
+++|++|++ .|-+..=| +++....|+++||+|+|++-..+
T Consensus 369 ~~rvLv~sp--HPDDevi~----~GGTlarl~~~G~~V~vv~~TsG 408 (652)
T PRK02122 369 PKRVIIFSP--HPDDDVIS----MGGTFRRLVEQGHDVHVAYQTSG 408 (652)
T ss_pred CceEEEEEe--CCCchHhh----hHHHHHHHHHCCCcEEEEEecCC
Confidence 589999998 46433322 34555779999999999976644
No 326
>PRK07454 short chain dehydrogenase; Provisional
Probab=23.17 E-value=1.1e+02 Score=29.03 Aligned_cols=34 Identities=18% Similarity=0.307 Sum_probs=24.2
Q ss_pred CceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEe
Q 010752 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp 126 (502)
.||.++|+- ..||+| ..+++.|.++|++|.++..
T Consensus 5 ~~k~vlItG------~sg~iG---~~la~~l~~~G~~V~~~~r 38 (241)
T PRK07454 5 SMPRALITG------ASSGIG---KATALAFAKAGWDLALVAR 38 (241)
T ss_pred CCCEEEEeC------CCchHH---HHHHHHHHHCCCEEEEEeC
Confidence 466666653 246666 5588899999999988764
No 327
>cd00027 BRCT Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo/hetero BRCT multimers, BRCT-non-BRCT interactions, and interactions within DNA strand breaks.
Probab=23.15 E-value=2.8e+02 Score=19.64 Aligned_cols=58 Identities=16% Similarity=0.224 Sum_probs=31.5
Q ss_pred eEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCC
Q 010752 432 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT 501 (502)
Q Consensus 432 v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi~l~PS~~E~fglv~lEAma~G~ 501 (502)
+.+.+.|.-+....+.++++...+++++..... ..++.+++++....-. ..+|...|+
T Consensus 2 ~~~~i~g~~~~~~~~~l~~~i~~~Gg~v~~~~~----------~~~thvI~~~~~~~~~--~~~~~~~~~ 59 (72)
T cd00027 2 LTFVITGDLPSEERDELKELIEKLGGKVTSSVS----------KKTTHVIVGSDAGPKK--LLKAIKLGI 59 (72)
T ss_pred CEEEEEecCCCcCHHHHHHHHHHcCCEEecccc----------CCceEEEECCCCCchH--HHHHHHcCC
Confidence 466777764334567788888887754443221 3456666654432111 455555554
No 328
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=23.13 E-value=83 Score=33.10 Aligned_cols=29 Identities=34% Similarity=0.529 Sum_probs=21.5
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTI 124 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vi 124 (502)
|||..++.-|- |+ -.+..|++.||+|..+
T Consensus 1 MkI~viGtGYV------GL-----v~g~~lA~~GHeVv~v 29 (414)
T COG1004 1 MKITVIGTGYV------GL-----VTGACLAELGHEVVCV 29 (414)
T ss_pred CceEEECCchH------HH-----HHHHHHHHcCCeEEEE
Confidence 89999987542 22 2456699999999887
No 329
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=23.09 E-value=61 Score=31.23 Aligned_cols=25 Identities=32% Similarity=0.490 Sum_probs=20.2
Q ss_pred cHHHHHhhhHHHHHHCCCeEEEEEe
Q 010752 102 GLGDVLGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 102 G~~~~v~~La~aLa~~Gh~V~vitp 126 (502)
|+|.+=..+|+.|.++||+|.++-.
T Consensus 7 G~G~vG~~va~~L~~~g~~Vv~Id~ 31 (225)
T COG0569 7 GAGRVGRSVARELSEEGHNVVLIDR 31 (225)
T ss_pred CCcHHHHHHHHHHHhCCCceEEEEc
Confidence 3455667899999999999999854
No 330
>TIGR01769 GGGP geranylgeranylglyceryl phosphate synthase. This model represents geranylgeranylglyceryl phosphate synthase which catalyzes the first committed step in the synthesis of ether-linked membrane lipids in archaea. The active enzyme is reported to be a homopentamer in Methanobacterium thermoautotrophicum but is reported to be a homodimer in Thermoplasma acidophilum.
Probab=23.05 E-value=74 Score=30.34 Aligned_cols=71 Identities=11% Similarity=0.140 Sum_probs=39.0
Q ss_pred cccccCHHHHHHHHhhcccCCeEEEEEeCCC----hhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCEEEEcCCC
Q 010752 411 LEEQKGSDILAAAIPHFIKENVQIIVLGTGK----KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRF 486 (502)
Q Consensus 411 l~~~KG~d~ll~Al~~L~~~~v~lvivG~g~----~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi~l~PS~~ 486 (502)
+.|.|- +.+.+.++++.+.....+++|... +...+.++.+.+...--+.. |+.. ...+...||.+++||..
T Consensus 5 iDP~k~-e~~~~ia~~v~~~gtDaI~VGGS~gvt~~~~~~~v~~ik~~~~lPvil---fp~~-~~~i~~~aD~~~~~sll 79 (205)
T TIGR01769 5 IDPEKS-DEIEKIAKNAKDAGTDAIMVGGSLGIVESNLDQTVKKIKKITNLPVIL---FPGN-VNGLSRYADAVFFMSLL 79 (205)
T ss_pred cCCCcH-HHHHHHHHHHHhcCCCEEEEcCcCCCCHHHHHHHHHHHHhhcCCCEEE---ECCC-ccccCcCCCEEEEEEee
Confidence 445554 556665656655566677777432 23344445554433211332 3332 23466889999999964
No 331
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=23.01 E-value=3.9e+02 Score=23.40 Aligned_cols=13 Identities=15% Similarity=-0.018 Sum_probs=10.1
Q ss_pred cccEEEeeCCCcC
Q 010752 347 KTGIKGIVNGMDV 359 (502)
Q Consensus 347 ~~~i~vI~NGvd~ 359 (502)
...+.|+.+|++.
T Consensus 28 ~~GfeVi~lg~~~ 40 (132)
T TIGR00640 28 DLGFDVDVGPLFQ 40 (132)
T ss_pred hCCcEEEECCCCC
Confidence 3478899999974
No 332
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=22.87 E-value=4e+02 Score=26.06 Aligned_cols=64 Identities=14% Similarity=0.303 Sum_probs=36.9
Q ss_pred HHHHHHHHhCCCCCCCCcEEEEE-cCcccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCce
Q 010752 386 LKEALQAEVGLPVDRNIPVIGFI-GRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKA 459 (502)
Q Consensus 386 ~k~~l~~~~gl~~~~~~p~i~~i-Grl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v 459 (502)
..+.+++++|+. ++++. |-+ +.+.--+.++.+.+.+..++++|=|.+.-|..+.+....++..+
T Consensus 121 a~~~l~~~y~l~------i~g~~~Gyf----~~~e~~~i~~~I~~s~~dil~VglG~PkQE~~~~~~~~~~~~~v 185 (243)
T PRK03692 121 TEAKLRTQWNVN------IVGSQDGYF----TPEQRQALFERIHASGAKIVTVAMGSPKQEIFMRDCRLVYPDAL 185 (243)
T ss_pred HHHHHHHHhCCE------EEEEeCCCC----CHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHHHhCCCCE
Confidence 455666666543 33332 333 33333334444444567788888887767788888777766443
No 333
>PLN00198 anthocyanidin reductase; Provisional
Probab=22.83 E-value=1.1e+02 Score=30.95 Aligned_cols=34 Identities=26% Similarity=0.138 Sum_probs=23.3
Q ss_pred CCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEe
Q 010752 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 83 ~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp 126 (502)
++|+|++.+. +|.+| ..|+++|.++||+|.++..
T Consensus 8 ~~~~vlItG~-------~GfIG---~~l~~~L~~~g~~V~~~~r 41 (338)
T PLN00198 8 GKKTACVIGG-------TGFLA---SLLIKLLLQKGYAVNTTVR 41 (338)
T ss_pred CCCeEEEECC-------chHHH---HHHHHHHHHCCCEEEEEEC
Confidence 3566655543 35555 4588999999999987654
No 334
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=22.80 E-value=1.1e+02 Score=31.33 Aligned_cols=33 Identities=33% Similarity=0.505 Sum_probs=26.1
Q ss_pred CceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
.|||..++. |..| ..||.-|+++||+|.+...+
T Consensus 1 ~~kI~ViGa--------GswG---TALA~~la~ng~~V~lw~r~ 33 (329)
T COG0240 1 MMKIAVIGA--------GSWG---TALAKVLARNGHEVRLWGRD 33 (329)
T ss_pred CceEEEEcC--------ChHH---HHHHHHHHhcCCeeEEEecC
Confidence 378888886 4445 45899999999999999764
No 335
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=22.54 E-value=1.1e+02 Score=31.96 Aligned_cols=36 Identities=28% Similarity=0.402 Sum_probs=26.1
Q ss_pred cCCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 82 ~~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
..+|+|+.++. +|++| ..+++.|.++||+|.+++..
T Consensus 58 ~~~~kVLVtGa-------tG~IG---~~l~~~Ll~~G~~V~~l~R~ 93 (390)
T PLN02657 58 PKDVTVLVVGA-------TGYIG---KFVVRELVRRGYNVVAVARE 93 (390)
T ss_pred CCCCEEEEECC-------CcHHH---HHHHHHHHHCCCEEEEEEec
Confidence 34678887664 46665 45788899999999888643
No 336
>PRK06027 purU formyltetrahydrofolate deformylase; Reviewed
Probab=22.36 E-value=2e+02 Score=28.80 Aligned_cols=37 Identities=8% Similarity=0.069 Sum_probs=24.6
Q ss_pred CCceEEEEeeeccCccccccHHHHHhhhHHHHHHC--CCeEEEEEecC
Q 010752 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN--GHRVMTIAPRY 128 (502)
Q Consensus 83 ~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~--Gh~V~vitp~~ 128 (502)
++|||+++.+ |+ |.-+..|..+.... +++|.++....
T Consensus 88 ~~~ri~vl~S--------g~-gsnl~al~~~~~~~~~~~~i~~visn~ 126 (286)
T PRK06027 88 ERKRVVILVS--------KE-DHCLGDLLWRWRSGELPVEIAAVISNH 126 (286)
T ss_pred cCcEEEEEEc--------CC-CCCHHHHHHHHHcCCCCcEEEEEEEcC
Confidence 4689999986 22 34566677666653 57888876654
No 337
>PF02635 DrsE: DsrE/DsrF-like family; InterPro: IPR003787 Four small, soluble proteins (DsrE, DsrF, DsrH and DsrC) are encoded in the dsr gene region of the phototrophic sulphur bacterium Chromatium vinosum D. The dsrAB genes encoding dissimilatory sulphite reductase are part of the gene cluster, dsrABEFHCMK. The remaining proteins that are encoded are a transmembrane protein (DsrM) with similarity to haem-b-binding polypeptides and a soluble protein (DsrK) resembling [4Fe-4S]-cluster-containing heterodisulphide reductase from methanogenic archaea. DsrE is a small soluble protein involved in intracellular sulphur reduction [].; PDB: 1L1S_A 2HYB_B 2HY5_B 2PD2_B 3MC3_A 2D1P_H 1JX7_B 2FB6_A.
Probab=22.34 E-value=1.7e+02 Score=24.17 Aligned_cols=40 Identities=25% Similarity=0.345 Sum_probs=26.8
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCC---CeEEEEEec
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG---HRVMTIAPR 127 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~G---h~V~vitp~ 127 (502)
|++++|.+. +|+ ..-.......++......| ++|.|+.-.
T Consensus 1 k~v~~i~~~-~p~--~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~g 43 (122)
T PF02635_consen 1 KKVFFIVTS-GPY--DDERAKIALRLANAAAAMGDYGHDVVVFFHG 43 (122)
T ss_dssp EEEEEEE-S--TT--TBSHHHHHHHHHHHHHHTTHTTSEEEEEE-G
T ss_pred CEEEEEecC-CCC--CCHHHHHHHHHHHHHHHcCCCCCcEEEEEEc
Confidence 688888875 442 1223556677888899999 999998643
No 338
>PLN02208 glycosyltransferase family protein
Probab=22.30 E-value=1.3e+02 Score=32.17 Aligned_cols=39 Identities=23% Similarity=0.177 Sum_probs=28.9
Q ss_pred CCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 83 ~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
++++|+++-. | . -|--.-+.+||+.|+.+|++|+++++.
T Consensus 3 ~~~hvv~~P~---p--a-qGHi~P~l~LAk~La~~G~~VT~vtt~ 41 (442)
T PLN02208 3 PKFHAFMFPW---F--A-FGHMIPFLHLANKLAEKGHRVTFLLPK 41 (442)
T ss_pred CCCEEEEecC---c--c-ccHHHHHHHHHHHHHhCCCEEEEEecc
Confidence 4567777752 3 2 344556788999999999999999854
No 339
>PRK05920 aromatic acid decarboxylase; Validated
Probab=22.23 E-value=1.6e+02 Score=28.06 Aligned_cols=36 Identities=22% Similarity=0.092 Sum_probs=26.7
Q ss_pred CceEEEEeeeccCccccccHH-HHHhhhHHHHHHCCCeEEEEEec
Q 010752 84 GLNILFVGTEVAPWSKTGGLG-DVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~-~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
++||++..+ ||.+ .....+.+.|.+.|++|.++..+
T Consensus 3 ~krIllgIT--------Gsiaa~ka~~lvr~L~~~g~~V~vi~T~ 39 (204)
T PRK05920 3 MKRIVLAIT--------GASGAIYGVRLLECLLAADYEVHLVISK 39 (204)
T ss_pred CCEEEEEEe--------CHHHHHHHHHHHHHHHHCCCEEEEEECh
Confidence 467877765 3333 35567899999999999999754
No 340
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=22.20 E-value=99 Score=29.20 Aligned_cols=33 Identities=24% Similarity=0.281 Sum_probs=22.6
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEe
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp 126 (502)
|+.++|+- -.||+| ..+++.|+++|++|.++..
T Consensus 1 ~~~~lItG------a~g~iG---~~l~~~l~~~g~~v~~~~~ 33 (247)
T PRK09730 1 MAIALVTG------GSRGIG---RATALLLAQEGYTVAVNYQ 33 (247)
T ss_pred CCEEEEeC------CCchHH---HHHHHHHHHCCCEEEEEeC
Confidence 55555553 245665 5588999999999977543
No 341
>TIGR03010 sulf_tusC_dsrF sulfur relay protein TusC/DsrF. The three proteins TusB, TusC, and TusD form a heterohexamer responsible for a sulfur relay reaction. In large numbers of proteobacterial species, this complex acts on a Cys-derived persulfide moiety, delivered by the cysteine desulfurase IscS to TusA, then to TusBCD. The activated sulfur group is then transferred to TusE (DsrC), then by MnmA (TrmU) for modification of an anticodon nucleotide in tRNAs for Glu, Lys, and Gln. The sulfur relay complex TusBCD is also found, under the designation DsrEFH, in phototrophic and chemotrophic sulfur bacteria, such as Chromatium vinosum. In these organisms, it seems the primary purpose is related to sulfur flux, such as oxidation from sulfide to molecular sulfur to sulfate.
Probab=22.17 E-value=1.4e+02 Score=25.35 Aligned_cols=38 Identities=21% Similarity=0.079 Sum_probs=26.5
Q ss_pred eEEEEeeeccCcccccc-HHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 86 NILFVGTEVAPWSKTGG-LGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 86 kIl~V~~~~~P~~~~GG-~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
||+||... +|| |. .+.--.+++-+++..+++|.|+...
T Consensus 1 kil~i~~~-~Py---g~~~~~e~l~~al~~aa~~~eV~vff~~ 39 (116)
T TIGR03010 1 KLAFVFRQ-APH---GTASGREGLDALLAASAFDEDIGVFFID 39 (116)
T ss_pred CEEEEEcC-CCC---CcchHHHHHHHHHHHHhccCCeEEEEec
Confidence 58888876 786 33 2333445688888889999998654
No 342
>TIGR03012 sulf_tusD_dsrE sulfur relay protein TusD/DsrE. The three proteins TusB, TusC, and TusD form a heterohexamer responsible for a sulfur relay reaction. In large numbers of proteobacterial species, this complex acts on a Cys-derived persulfide moiety, delivered by the cysteine desulfurase IscS to TusA, then to TusBCD. The activated sulfur group is then transferred to TusE (DsrC), then by MnmA (TrmU) for modification of an anticodon nucleotide in tRNAs for Glu, Lys, and Gln. The sulfur relay complex TusBCD is also found, under the designation DsrEFH, in phototrophic and chemotrophic sulfur bacteria, such as Chromatium vinosum. In these organisms, it seems the primary purpose is related to sulfur flux, such as oxidation from sulfide to molecular sulfur to sulfate.
Probab=22.08 E-value=1.7e+02 Score=25.52 Aligned_cols=37 Identities=19% Similarity=0.236 Sum_probs=25.5
Q ss_pred eEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeE-EEEE
Q 010752 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRV-MTIA 125 (502)
Q Consensus 86 kIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V-~vit 125 (502)
|++++... +|| .+-.+....+++.++.+.||+| .|+-
T Consensus 1 ~~~iv~~~-~P~--~~~~~~~al~~A~aa~~~gh~v~~vFf 38 (127)
T TIGR03012 1 KYTLLVTG-PPY--GTQAASSAYQFAQALLAKGHEIVRVFF 38 (127)
T ss_pred CEEEEEeC-CCC--CcHHHHHHHHHHHHHHHCCCcEEEEEE
Confidence 46666654 675 2334556778999999999995 5553
No 343
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=22.07 E-value=4.1e+02 Score=26.22 Aligned_cols=82 Identities=20% Similarity=0.291 Sum_probs=59.3
Q ss_pred EEEEEcCcccccCHHHHHHHHhhcccC-CeEEEEEeCCC-----hhhHHHHHHHHHHCCCceE--EEeecChHHHHHHHH
Q 010752 404 VIGFIGRLEEQKGSDILAAAIPHFIKE-NVQIIVLGTGK-----KPMEKQLEQLEILYPEKAR--GVAKFNIPLAHMIIA 475 (502)
Q Consensus 404 ~i~~iGrl~~~KG~d~ll~Al~~L~~~-~v~lvivG~g~-----~~~~~~l~~l~~~~~~~v~--~~~~~~~~~~~~ila 475 (502)
.++|+|-+.-+-|.+.+-+-+++|+.+ +..|+|+.... .--++..+++.+ ++-++. +...|...++.+++.
T Consensus 2 riLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~Git~k~y~~l~~-~G~dviT~GNH~wd~~ei~~~i~ 80 (266)
T COG1692 2 RILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGFGITEKIYKELLE-AGADVITLGNHTWDQKEILDFID 80 (266)
T ss_pred eEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCCcCCCHHHHHHHHH-hCCCEEecccccccchHHHHHhh
Confidence 478999999999999999999999774 77888887422 123444555543 342232 233466778889999
Q ss_pred hcCEEEEcCCC
Q 010752 476 GADFILIPSRF 486 (502)
Q Consensus 476 ~ADi~l~PS~~ 486 (502)
.++.+|=|..+
T Consensus 81 ~~~~ilRP~N~ 91 (266)
T COG1692 81 NADRILRPANY 91 (266)
T ss_pred cccceeccCCC
Confidence 99999999877
No 344
>PRK13555 azoreductase; Provisional
Probab=22.06 E-value=6.3e+02 Score=23.90 Aligned_cols=38 Identities=8% Similarity=0.193 Sum_probs=22.0
Q ss_pred ceEEEEeeeccCccccccHHHHH-hhhHHHHHHCC--CeEEEE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVL-GGLPPALAANG--HRVMTI 124 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v-~~La~aLa~~G--h~V~vi 124 (502)
||||+|.+. |....+.....+ ......+.+.| |+|.++
T Consensus 2 ~kiL~I~as--p~~~~~S~s~~la~~f~~~~~~~~p~~~V~~~ 42 (208)
T PRK13555 2 SKVLFVKAN--DRPAEQAVSSKMYETFVSTYKEANPNTEITEL 42 (208)
T ss_pred CeEEEEeCC--CCCCCCcHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 689999874 421123333333 33455666665 888776
No 345
>PRK08655 prephenate dehydrogenase; Provisional
Probab=21.99 E-value=1.1e+02 Score=32.63 Aligned_cols=33 Identities=30% Similarity=0.519 Sum_probs=24.3
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
|||++|+. .|++| ..++.+|.+.||+|.++..+
T Consensus 1 MkI~IIGG-------~G~mG---~slA~~L~~~G~~V~v~~r~ 33 (437)
T PRK08655 1 MKISIIGG-------TGGLG---KWFARFLKEKGFEVIVTGRD 33 (437)
T ss_pred CEEEEEec-------CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 78888862 25554 55888899999999888643
No 346
>TIGR03172 probable selenium-dependent hydroxylase accessory protein YqeC. This uncharacterized protein family includes YqeC from Escherichia coli. A phylogenetic profiling analysis shows correlation with SelD, the selenium donor protein, even in species where SelD contributes to neither selenocysteine nor selenouridine biosynthesis. Instead, this family, and families TIGR03309 and TIGR03310 appear to mark selenium-dependent molybdenum hydroxylase maturation systems.
Probab=21.98 E-value=1.2e+02 Score=29.47 Aligned_cols=28 Identities=21% Similarity=0.263 Sum_probs=25.4
Q ss_pred ccHHHHHhhhHHHHHHCCCeEEEEEecC
Q 010752 101 GGLGDVLGGLPPALAANGHRVMTIAPRY 128 (502)
Q Consensus 101 GG~~~~v~~La~aLa~~Gh~V~vitp~~ 128 (502)
||=...+..|+..|.++|.+|.+.|...
T Consensus 8 gGKTtl~~~l~~~~~~~g~~v~~TTTT~ 35 (232)
T TIGR03172 8 GGKTSTMFWLAAEYRKEGYRVLVTTTTR 35 (232)
T ss_pred CcHHHHHHHHHHHHHHCCCeEEEECCcc
Confidence 8999999999999999999998887654
No 347
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=21.95 E-value=6.9e+02 Score=23.69 Aligned_cols=71 Identities=13% Similarity=0.117 Sum_probs=39.9
Q ss_pred CHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeec-ChHHHH-HHHHhcCEEEEcCCC
Q 010752 416 GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAH-MIIAGADFILIPSRF 486 (502)
Q Consensus 416 G~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~~-~ila~ADi~l~PS~~ 486 (502)
..+..++.++.|.+-.++.+=+--..+.-.+.++++.+++++-+.+.+.. +.+++. .+-++|++++-|...
T Consensus 14 ~~~~a~~ia~al~~gGi~~iEit~~tp~a~~~I~~l~~~~~~~~vGAGTVl~~e~a~~ai~aGA~FivSP~~~ 86 (201)
T PRK06015 14 DVEHAVPLARALAAGGLPAIEITLRTPAALDAIRAVAAEVEEAIVGAGTILNAKQFEDAAKAGSRFIVSPGTT 86 (201)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCccHHHHHHHHHHHCCCCEEeeEeCcCHHHHHHHHHcCCCEEECCCCC
Confidence 55566666666655444333222223335566777777777544555544 344443 566778888877653
No 348
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=21.94 E-value=1.2e+02 Score=30.95 Aligned_cols=33 Identities=24% Similarity=0.199 Sum_probs=24.3
Q ss_pred CCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEE
Q 010752 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 83 ~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vit 125 (502)
+.|+|+..+. +|.+| ..+++.|.++|++|.++.
T Consensus 9 ~~~~vLVtG~-------~GfIG---~~l~~~L~~~G~~V~~~~ 41 (353)
T PLN02896 9 ATGTYCVTGA-------TGYIG---SWLVKLLLQRGYTVHATL 41 (353)
T ss_pred CCCEEEEECC-------CcHHH---HHHHHHHHHCCCEEEEEe
Confidence 4688877663 35555 558889999999998865
No 349
>PRK06182 short chain dehydrogenase; Validated
Probab=21.93 E-value=1.3e+02 Score=29.23 Aligned_cols=25 Identities=36% Similarity=0.481 Sum_probs=19.4
Q ss_pred cccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 100 ~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
+||+| ..+++.|+++||+|.++..+
T Consensus 12 sggiG---~~la~~l~~~G~~V~~~~r~ 36 (273)
T PRK06182 12 SSGIG---KATARRLAAQGYTVYGAARR 36 (273)
T ss_pred CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 47777 44888999999999887643
No 350
>PRK07538 hypothetical protein; Provisional
Probab=21.89 E-value=75 Score=33.30 Aligned_cols=30 Identities=30% Similarity=0.534 Sum_probs=22.9
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vit 125 (502)
|+|++|+. .| +|+. +|.+|+++|++|.|+=
T Consensus 1 ~dV~IVGa--G~----aGl~-----~A~~L~~~G~~v~v~E 30 (413)
T PRK07538 1 MKVLIAGG--GI----GGLT-----LALTLHQRGIEVVVFE 30 (413)
T ss_pred CeEEEECC--CH----HHHH-----HHHHHHhCCCcEEEEE
Confidence 78999986 23 5654 5667999999998884
No 351
>PF01936 NYN: NYN domain; InterPro: IPR021139 This highly conserved domain has no known function. However it contains many conserved aspartates, suggesting an enzymatic function such as an endonuclease or glycosyl hydrolase.; PDB: 2QIP_A.
Probab=21.85 E-value=2.4e+02 Score=24.20 Aligned_cols=66 Identities=14% Similarity=0.177 Sum_probs=33.5
Q ss_pred ccccCHHHH--HHHHhhcccC--CeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhcCEEE
Q 010752 412 EEQKGSDIL--AAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 481 (502)
Q Consensus 412 ~~~KG~d~l--l~Al~~L~~~--~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ADi~l 481 (502)
..+|+.|.. ++++..+.+. +.-+++-|++ .+...++.+.+. +-++...+ ........+.+.||=++
T Consensus 74 ~~k~~~D~~l~~d~~~~~~~~~~d~ivLvSgD~--Df~~~v~~l~~~-g~~V~v~~-~~~~~s~~L~~~ad~f~ 143 (146)
T PF01936_consen 74 GGKKGVDVALAVDILELAYENPPDTIVLVSGDS--DFAPLVRKLRER-GKRVIVVG-AEDSASEALRSAADEFI 143 (146)
T ss_dssp --S---HHHHHHHHHHHG--GG-SEEEEE---G--GGHHHHHHHHHH---EEEEEE--GGGS-HHHHHHSSEEE
T ss_pred cccCCcHHHHHHHHHHHhhccCCCEEEEEECcH--HHHHHHHHHHHc-CCEEEEEE-eCCCCCHHHHHhcCEEE
Confidence 467888864 4777666543 4444444444 477778877744 44466666 34455567888998776
No 352
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=21.82 E-value=1.1e+02 Score=30.48 Aligned_cols=33 Identities=24% Similarity=0.433 Sum_probs=23.2
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
|+|++++. .|++| ..+++.|.++||+|.++.-.
T Consensus 1 ~~vlItG~-------~G~iG---~~l~~~L~~~g~~V~~~~r~ 33 (328)
T TIGR03466 1 MKVLVTGA-------TGFVG---SAVVRLLLEQGEEVRVLVRP 33 (328)
T ss_pred CeEEEECC-------ccchh---HHHHHHHHHCCCEEEEEEec
Confidence 46665553 35555 45889999999999888643
No 353
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=21.79 E-value=8.4e+02 Score=25.32 Aligned_cols=98 Identities=14% Similarity=0.084 Sum_probs=58.8
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHhhcccCCeEEEEEeCCCh------------hhHHHHHHHHHHCCCceEEEeecChH
Q 010752 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK------------PMEKQLEQLEILYPEKARGVAKFNIP 468 (502)
Q Consensus 401 ~~p~i~~iGrl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~------------~~~~~l~~l~~~~~~~v~~~~~~~~~ 468 (502)
+.+.++..|. ..-...+.+++.+..+.+..++++--|..++ +..+.+++..++++- -...-.++..
T Consensus 99 ~~~l~vIAGP-CsIEs~eq~l~~A~~lk~~g~~~~r~g~~kpRtsp~sf~G~g~~gl~~L~~~~~e~Gl-~~~tev~d~~ 176 (352)
T PRK13396 99 NHPVVVVAGP-CSVENEEMIVETAKRVKAAGAKFLRGGAYKPRTSPYAFQGHGESALELLAAAREATGL-GIITEVMDAA 176 (352)
T ss_pred CCeEEEEEeC-CcccCHHHHHHHHHHHHHcCCCEEEeeeecCCCCCcccCCchHHHHHHHHHHHHHcCC-cEEEeeCCHH
Confidence 4555666663 3345566777777777666777777664332 223445555556552 1233455666
Q ss_pred HHHHHHHhcCEEEEcCCC-CCCcHHHHHHH-HcCCC
Q 010752 469 LAHMIIAGADFILIPSRF-EPCGLIQLHAM-RYGTV 502 (502)
Q Consensus 469 ~~~~ila~ADi~l~PS~~-E~fglv~lEAm-a~G~P 502 (502)
.+..+...+|++=++|+. -.|.+ |++. ..|+|
T Consensus 177 ~v~~~~~~~d~lqIga~~~~n~~L--L~~va~t~kP 210 (352)
T PRK13396 177 DLEKIAEVADVIQVGARNMQNFSL--LKKVGAQDKP 210 (352)
T ss_pred HHHHHHhhCCeEEECcccccCHHH--HHHHHccCCe
Confidence 676677779999999986 55554 5554 34443
No 354
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=21.59 E-value=69 Score=29.01 Aligned_cols=35 Identities=17% Similarity=0.310 Sum_probs=26.5
Q ss_pred CCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecC
Q 010752 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (502)
Q Consensus 83 ~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~ 128 (502)
++.+|++|+. |.+-...++.|.+.|++|+|++|..
T Consensus 12 ~~~~vlVvGG-----------G~va~rka~~Ll~~ga~V~VIsp~~ 46 (157)
T PRK06719 12 HNKVVVIIGG-----------GKIAYRKASGLKDTGAFVTVVSPEI 46 (157)
T ss_pred CCCEEEEECC-----------CHHHHHHHHHHHhCCCEEEEEcCcc
Confidence 3567777763 3356778999999999999997654
No 355
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=21.57 E-value=76 Score=28.64 Aligned_cols=28 Identities=29% Similarity=0.329 Sum_probs=22.0
Q ss_pred ccHHHHHhhhHHHHHHCCCeEEEEEecC
Q 010752 101 GGLGDVLGGLPPALAANGHRVMTIAPRY 128 (502)
Q Consensus 101 GG~~~~v~~La~aLa~~Gh~V~vitp~~ 128 (502)
||.|.+=..+++.|.++||+|.+++.+.
T Consensus 5 GatG~vG~~l~~~L~~~~~~V~~~~R~~ 32 (183)
T PF13460_consen 5 GATGFVGRALAKQLLRRGHEVTALVRSP 32 (183)
T ss_dssp TTTSHHHHHHHHHHHHTTSEEEEEESSG
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEecCc
Confidence 4445455669999999999999998653
No 356
>PLN02562 UDP-glycosyltransferase
Probab=21.48 E-value=3.9e+02 Score=28.63 Aligned_cols=89 Identities=9% Similarity=-0.074 Sum_probs=47.5
Q ss_pred cEEEEEcCcc---cccCHHHHHHHHhhcccCCeEEEE-EeCCCh-hhHHHHHHHHHHCCCceEEEeecChHHHHHHHHhc
Q 010752 403 PVIGFIGRLE---EQKGSDILAAAIPHFIKENVQIIV-LGTGKK-PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 477 (502)
Q Consensus 403 p~i~~iGrl~---~~KG~d~ll~Al~~L~~~~v~lvi-vG~g~~-~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~A 477 (502)
.+.+..|... +.+-++.++.++.++ ..++++ +..+.. ...+ ...++.++++....+.+.. .+|+..
T Consensus 275 vvyvsfGS~~~~~~~~~~~~l~~~l~~~---g~~fiW~~~~~~~~~l~~---~~~~~~~~~~~v~~w~PQ~---~iL~h~ 345 (448)
T PLN02562 275 VIYISFGSWVSPIGESNVRTLALALEAS---GRPFIWVLNPVWREGLPP---GYVERVSKQGKVVSWAPQL---EVLKHQ 345 (448)
T ss_pred eEEEEecccccCCCHHHHHHHHHHHHHC---CCCEEEEEcCCchhhCCH---HHHHHhccCEEEEecCCHH---HHhCCC
Confidence 3667778754 344566666666665 335554 332211 1111 1222334556555554443 378777
Q ss_pred CEEEEcCCCCCCcHHHHHHHHcCCC
Q 010752 478 DFILIPSRFEPCGLIQLHAMRYGTV 502 (502)
Q Consensus 478 Di~l~PS~~E~fglv~lEAma~G~P 502 (502)
++.++=+ -+--.+++||+.+|+|
T Consensus 346 ~v~~fvt--H~G~nS~~Eal~~GvP 368 (448)
T PLN02562 346 AVGCYLT--HCGWNSTMEAIQCQKR 368 (448)
T ss_pred ccceEEe--cCcchhHHHHHHcCCC
Confidence 7533221 1224689999999998
No 357
>PRK06101 short chain dehydrogenase; Provisional
Probab=21.39 E-value=1.3e+02 Score=28.58 Aligned_cols=24 Identities=29% Similarity=0.466 Sum_probs=18.9
Q ss_pred cccHHHHHhhhHHHHHHCCCeEEEEEe
Q 010752 100 TGGLGDVLGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 100 ~GG~~~~v~~La~aLa~~Gh~V~vitp 126 (502)
+||+| ..+++.|+++|++|.++..
T Consensus 10 s~giG---~~la~~L~~~G~~V~~~~r 33 (240)
T PRK06101 10 TSGIG---KQLALDYAKQGWQVIACGR 33 (240)
T ss_pred CcHHH---HHHHHHHHhCCCEEEEEEC
Confidence 46766 5688999999999987753
No 358
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=21.36 E-value=1.3e+02 Score=28.48 Aligned_cols=34 Identities=29% Similarity=0.487 Sum_probs=23.8
Q ss_pred CceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
+|+|++.+. .||+| ..+++.|.++|++|.++..+
T Consensus 6 ~~~ilItGa-------sg~iG---~~l~~~l~~~g~~V~~~~r~ 39 (251)
T PRK12826 6 GRVALVTGA-------ARGIG---RAIAVRLAADGAEVIVVDIC 39 (251)
T ss_pred CCEEEEcCC-------CCcHH---HHHHHHHHHCCCEEEEEeCC
Confidence 456665553 36665 55888899999999887543
No 359
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=21.34 E-value=95 Score=29.97 Aligned_cols=32 Identities=25% Similarity=0.378 Sum_probs=23.8
Q ss_pred EEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEe
Q 010752 87 ILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 87 Il~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp 126 (502)
|=||++. .+|++| ..|+++|.++||+|++++.
T Consensus 17 VR~itN~-----SSG~iG---~aLA~~L~~~G~~V~li~r 48 (229)
T PRK06732 17 VRGITNH-----STGQLG---KIIAETFLAAGHEVTLVTT 48 (229)
T ss_pred ceeecCc-----cchHHH---HHHHHHHHhCCCEEEEEEC
Confidence 4455542 567777 5588999999999998863
No 360
>TIGR00670 asp_carb_tr aspartate carbamoyltransferase. Ornithine carbamoyltransferases are in the same superfamily and form an outgroup.
Probab=21.09 E-value=8.6e+02 Score=24.52 Aligned_cols=86 Identities=20% Similarity=0.242 Sum_probs=51.9
Q ss_pred HHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHH
Q 010752 390 LQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPL 469 (502)
Q Consensus 390 l~~~~gl~~~~~~p~i~~iGrl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~ 469 (502)
+++++|- . +...|.|+|-+.+..=..-++.++.++ ++++.+++...-...+.+.+..++.+.++... +.
T Consensus 141 i~e~~g~-l--~g~~va~vGD~~~~~v~~Sl~~~~a~~---g~~v~~~~P~~~~~~~~~~~~~~~~G~~v~~~-----~d 209 (301)
T TIGR00670 141 IYEEFGR-L--DGLKIALVGDLKYGRTVHSLAEALTRF---GVEVYLISPEELRMPKEILEELKAKGIKVRET-----ES 209 (301)
T ss_pred HHHHhCC-C--CCCEEEEEccCCCCcHHHHHHHHHHHc---CCEEEEECCccccCCHHHHHHHHHcCCEEEEE-----CC
Confidence 3445562 1 445899999765555578888888887 67888888643111222333333344333321 23
Q ss_pred HHHHHHhcCEEEEcCCC
Q 010752 470 AHMIIAGADFILIPSRF 486 (502)
Q Consensus 470 ~~~ila~ADi~l~PS~~ 486 (502)
..+.+++||++...+..
T Consensus 210 ~~~a~~~aDvvyt~~~~ 226 (301)
T TIGR00670 210 LEEVIDEADVLYVTRIQ 226 (301)
T ss_pred HHHHhCCCCEEEECCcc
Confidence 45688999998887653
No 361
>PRK06924 short chain dehydrogenase; Provisional
Probab=21.02 E-value=1.1e+02 Score=29.00 Aligned_cols=24 Identities=29% Similarity=0.577 Sum_probs=18.9
Q ss_pred cccHHHHHhhhHHHHHHCCCeEEEEEe
Q 010752 100 TGGLGDVLGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 100 ~GG~~~~v~~La~aLa~~Gh~V~vitp 126 (502)
.||+| ..+++.|+++|++|.+++.
T Consensus 10 sggiG---~~ia~~l~~~g~~V~~~~r 33 (251)
T PRK06924 10 SQGLG---EAIANQLLEKGTHVISISR 33 (251)
T ss_pred CchHH---HHHHHHHHhcCCEEEEEeC
Confidence 46776 5578999999999987753
No 362
>PLN02240 UDP-glucose 4-epimerase
Probab=21.02 E-value=1.2e+02 Score=30.53 Aligned_cols=32 Identities=31% Similarity=0.434 Sum_probs=23.1
Q ss_pred CceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEE
Q 010752 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vit 125 (502)
+++|++.+. +|++| ..+++.|.++||+|.++.
T Consensus 5 ~~~vlItGa-------tG~iG---~~l~~~L~~~g~~V~~~~ 36 (352)
T PLN02240 5 GRTILVTGG-------AGYIG---SHTVLQLLLAGYKVVVID 36 (352)
T ss_pred CCEEEEECC-------CChHH---HHHHHHHHHCCCEEEEEe
Confidence 457766553 46666 457888999999998875
No 363
>PLN02778 3,5-epimerase/4-reductase
Probab=21.00 E-value=1.2e+02 Score=30.30 Aligned_cols=31 Identities=29% Similarity=0.304 Sum_probs=22.1
Q ss_pred CceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEE
Q 010752 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTI 124 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vi 124 (502)
.|||+..+. +|=+| ..|++.|.++||+|++.
T Consensus 9 ~~kiLVtG~-------tGfiG---~~l~~~L~~~g~~V~~~ 39 (298)
T PLN02778 9 TLKFLIYGK-------TGWIG---GLLGKLCQEQGIDFHYG 39 (298)
T ss_pred CCeEEEECC-------CCHHH---HHHHHHHHhCCCEEEEe
Confidence 589887654 24333 55889999999999653
No 364
>TIGR03219 salicylate_mono salicylate 1-monooxygenase. Members of this protein family are salicylate 1-monooxygenase, also called salicylate hydroxylase. This enzyme converts salicylate to catechol, which is a common intermediate in the degradation of a number of aromatic compounds (phenol, toluene, benzoate, etc.). The gene for this protein may occur in catechol degradation genes, such as those of the meta-cleavage pathway.
Probab=20.81 E-value=85 Score=32.85 Aligned_cols=29 Identities=24% Similarity=0.453 Sum_probs=22.3
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCC-eEEEE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGH-RVMTI 124 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh-~V~vi 124 (502)
|||++|+. ..+|+. +|.+|+++|| +|+|+
T Consensus 1 ~~V~IiGg------GiaGla-----~A~~L~~~g~~~v~v~ 30 (414)
T TIGR03219 1 LRVAIIGG------GIAGVA-----LALNLCKHSHLNVQLF 30 (414)
T ss_pred CeEEEECC------CHHHHH-----HHHHHHhcCCCCEEEE
Confidence 78999986 236654 7778999996 99887
No 365
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=20.77 E-value=95 Score=29.92 Aligned_cols=31 Identities=23% Similarity=0.395 Sum_probs=23.9
Q ss_pred EEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEE
Q 010752 87 ILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 87 Il~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vit 125 (502)
|=||++. .+||+| ..+|++|+++|++|+++.
T Consensus 16 VR~itN~-----SSGgIG---~AIA~~la~~Ga~Vvlv~ 46 (227)
T TIGR02114 16 VRSITNH-----STGHLG---KIITETFLSAGHEVTLVT 46 (227)
T ss_pred ceeecCC-----cccHHH---HHHHHHHHHCCCEEEEEc
Confidence 4466652 578888 558999999999998874
No 366
>COG2120 Uncharacterized proteins, LmbE homologs [Function unknown]
Probab=20.69 E-value=1.5e+02 Score=28.72 Aligned_cols=43 Identities=28% Similarity=0.278 Sum_probs=29.1
Q ss_pred cCCceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEecCCC
Q 010752 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (502)
Q Consensus 82 ~~~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~~~~ 130 (502)
...++|+.|.+. |-+..=|. +.....++++|++|.+++-..+.
T Consensus 8 ~~~~~vL~v~aH--PDDe~~g~----ggtla~~~~~G~~V~v~~lT~Ge 50 (237)
T COG2120 8 LDPLRVLVVFAH--PDDEEIGC----GGTLAKLAARGVEVTVVCLTLGE 50 (237)
T ss_pred ccCCcEEEEecC--Ccchhhcc----HHHHHHHHHCCCeEEEEEccCCc
Confidence 346899999984 54442222 23334469999999999977554
No 367
>PRK05568 flavodoxin; Provisional
Probab=20.60 E-value=2e+02 Score=24.93 Aligned_cols=27 Identities=19% Similarity=0.213 Sum_probs=24.0
Q ss_pred ccccHHHHHhhhHHHHHHCCCeEEEEE
Q 010752 99 KTGGLGDVLGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 99 ~~GG~~~~v~~La~aLa~~Gh~V~vit 125 (502)
.+|....+...+++.+.+.|++|.++-
T Consensus 11 ~~GnT~~~a~~i~~~~~~~g~~v~~~~ 37 (142)
T PRK05568 11 GTGNTEAMANLIAEGAKENGAEVKLLN 37 (142)
T ss_pred CCchHHHHHHHHHHHHHHCCCeEEEEE
Confidence 469999999999999999999998874
No 368
>TIGR03815 CpaE_hom_Actino helicase/secretion neighborhood CpaE-like protein. Members of this protein family belong to the MinD/ParA family of P-loop NTPases, and in particular show homology to the CpaE family of pilus assembly proteins (see PubMed:12370432). Nearly all members are found, not only in a gene context consistent with pilus biogenesis or a pilus-like secretion apparatus, but also near a DEAD/DEAH-box helicase, suggesting an involvement in DNA transfer activity. The model describes a clade restricted to the Actinobacteria.
Probab=20.28 E-value=1.3e+02 Score=30.49 Aligned_cols=26 Identities=31% Similarity=0.473 Sum_probs=20.5
Q ss_pred cccHHHH--HhhhHHHHHHCCCeEEEEE
Q 010752 100 TGGLGDV--LGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 100 ~GG~~~~--v~~La~aLa~~Gh~V~vit 125 (502)
.||.|+. ..+||.+|+++|.+|.++=
T Consensus 102 KGGvGkTT~a~nLA~~la~~g~~VlLvD 129 (322)
T TIGR03815 102 RGGAGASTLAAALALAAARHGLRTLLVD 129 (322)
T ss_pred CCCCcHHHHHHHHHHHHHhcCCCEEEEe
Confidence 4665554 4789999999999998883
No 369
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=20.21 E-value=90 Score=24.24 Aligned_cols=22 Identities=32% Similarity=0.229 Sum_probs=18.9
Q ss_pred HHhhhHHHHHHCCCeEEEEEec
Q 010752 106 VLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 106 ~v~~La~aLa~~Gh~V~vitp~ 127 (502)
.--++|..|++.|.+|+++...
T Consensus 10 ig~E~A~~l~~~g~~vtli~~~ 31 (80)
T PF00070_consen 10 IGIELAEALAELGKEVTLIERS 31 (80)
T ss_dssp HHHHHHHHHHHTTSEEEEEESS
T ss_pred HHHHHHHHHHHhCcEEEEEecc
Confidence 4567999999999999999765
No 370
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways. In this reaction, two atoms of dioxygen are reduced to one hydroxyl group and one H2O molecule by the concomitant oxidation of NAD(P)H []. P-hydroxybenzoate hydroxylase from Pseudomonas fluorescens contains this sequence motif (present in in flavoprotein hydroxylases) with a putative dual function in FAD and NADPH binding [].; PDB: 2Y6R_B 2XYO_C 2Y6Q_C 3P9U_D 2XDO_C 1FOH_D 1PN0_A 3IHG_C 2QA2_A 2VOU_C ....
Probab=20.20 E-value=96 Score=30.91 Aligned_cols=30 Identities=37% Similarity=0.561 Sum_probs=21.6
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEE
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vit 125 (502)
.+|++|+. .| +|+. +|.+|+++|++|.|+=
T Consensus 2 ~dV~IvGa--G~----aGl~-----~A~~L~~~G~~v~i~E 31 (356)
T PF01494_consen 2 YDVAIVGA--GP----AGLA-----AALALARAGIDVTIIE 31 (356)
T ss_dssp EEEEEE----SH----HHHH-----HHHHHHHTTCEEEEEE
T ss_pred ceEEEECC--CH----HHHH-----HHHHHHhcccccccch
Confidence 47888886 23 5654 7888999999999984
No 371
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=20.18 E-value=1.2e+02 Score=32.20 Aligned_cols=32 Identities=19% Similarity=0.114 Sum_probs=24.2
Q ss_pred CceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEe
Q 010752 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (502)
Q Consensus 84 ~MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp 126 (502)
.|||++|+.-+ -| ..+|..|+++||+|.++-.
T Consensus 3 ~~kI~VIGlG~------~G-----~~~A~~La~~G~~V~~~D~ 34 (415)
T PRK11064 3 FETISVIGLGY------IG-----LPTAAAFASRQKQVIGVDI 34 (415)
T ss_pred ccEEEEECcch------hh-----HHHHHHHHhCCCEEEEEeC
Confidence 48999998632 12 3478889999999988854
No 372
>COG0655 WrbA Multimeric flavodoxin WrbA [General function prediction only]
Probab=20.12 E-value=1.8e+02 Score=27.34 Aligned_cols=40 Identities=18% Similarity=0.241 Sum_probs=32.5
Q ss_pred ceEEEEeeeccCccccccHHHHHhhhHHHHHHCCCeEEEEEec
Q 010752 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (502)
Q Consensus 85 MkIl~V~~~~~P~~~~GG~~~~v~~La~aLa~~Gh~V~vitp~ 127 (502)
|||+.|+- .|. +.|-....+...++++.+.|.||.++.-.
T Consensus 1 mki~~I~g--s~r-~~G~t~~l~~~~~~g~~~~G~E~~~i~v~ 40 (207)
T COG0655 1 MKILGING--SPR-SNGNTAKLAEAVLEGAEEAGAEVEIIRLP 40 (207)
T ss_pred CeeeEEEe--cCC-CCCcHHHHHHHHHHHHHHcCCEEEEEEec
Confidence 78888886 343 36888888888999999999999999643
No 373
>cd01453 vWA_transcription_factor_IIH_type Transcription factors IIH type: TFIIH is a multiprotein complex that is one of the five general transcription factors that binds RNA polymerase II holoenzyme. Orthologues of these genes are found in all completed eukaryotic genomes and all these proteins contain a VWA domain. The p44 subunit of TFIIH functions as a DNA helicase in RNA polymerase II transcription initiation and DNA repair, and its transcriptional activity is dependent on its C-terminal Zn-binding domains. The function of the vWA domain is unclear, but may be involved in complex assembly. The MIDAS motif is not conserved in this sub-group.
Probab=20.12 E-value=6.8e+02 Score=22.93 Aligned_cols=69 Identities=12% Similarity=0.095 Sum_probs=40.5
Q ss_pred cEEEEEcCcccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeecChHHHHHHHHh
Q 010752 403 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 476 (502)
Q Consensus 403 p~i~~iGrl~~~KG~d~ll~Al~~L~~~~v~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ila~ 476 (502)
.+|++++-.+.... ..+.++.+++.+.++++.++|-|.+ .+.|+++++.-++ .++..-+.+.+..+|..
T Consensus 109 ~iiil~sd~~~~~~-~~~~~~~~~l~~~~I~v~~IgiG~~--~~~L~~ia~~tgG--~~~~~~~~~~l~~~~~~ 177 (183)
T cd01453 109 EVLIIFSSLSTCDP-GNIYETIDKLKKENIRVSVIGLSAE--MHICKEICKATNG--TYKVILDETHLKELLLE 177 (183)
T ss_pred EEEEEEcCCCcCCh-hhHHHHHHHHHHcCcEEEEEEechH--HHHHHHHHHHhCC--eeEeeCCHHHHHHHHHh
Confidence 35555554433221 1223445555556899988888763 3568888877663 34444455666677665
No 374
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=20.10 E-value=7.2e+02 Score=23.21 Aligned_cols=70 Identities=11% Similarity=0.033 Sum_probs=40.3
Q ss_pred ccCHHHHHHHHhhcccCCeEEEEEeCCCh---hhHHHHHHHHHHCCCceEEEeec---ChHHHHHHHHhcCEEEEc
Q 010752 414 QKGSDILAAAIPHFIKENVQIIVLGTGKK---PMEKQLEQLEILYPEKARGVAKF---NIPLAHMIIAGADFILIP 483 (502)
Q Consensus 414 ~KG~d~ll~Al~~L~~~~v~lvivG~g~~---~~~~~l~~l~~~~~~~v~~~~~~---~~~~~~~ila~ADi~l~P 483 (502)
....+.+-+.+.+....+.+++++.+... .+-+...+.-++++-++..+... +.+...+.+..||+++++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~l~~ad~I~~~ 87 (210)
T cd03129 12 AHARPILQDFLARAGGAGARVLFIPTASGDRDEYGEEYRAAFERLGVEVVHLLLIDTANDPDVVARLLEADGIFVG 87 (210)
T ss_pred cChHHHHHHHHHHcCCCCCeEEEEeCCCCChHHHHHHHHHHHHHcCCceEEEeccCCCCCHHHHHHHhhCCEEEEc
Confidence 33444444444444335677888876542 23334444444555444444433 346677899999999998
No 375
>PRK08105 flavodoxin; Provisional
Probab=20.10 E-value=1.7e+02 Score=26.17 Aligned_cols=27 Identities=26% Similarity=0.192 Sum_probs=24.3
Q ss_pred ccccHHHHHhhhHHHHHHCCCeEEEEE
Q 010752 99 KTGGLGDVLGGLPPALAANGHRVMTIA 125 (502)
Q Consensus 99 ~~GG~~~~v~~La~aLa~~Gh~V~vit 125 (502)
.+|-.+.+...++..|.++|++|.++.
T Consensus 11 ~tGnte~~A~~l~~~l~~~g~~~~~~~ 37 (149)
T PRK08105 11 VYGNALLVAEEAEAILTAQGHEVTLFE 37 (149)
T ss_pred CchHHHHHHHHHHHHHHhCCCceEEec
Confidence 678899999999999999999998874
Done!