Query 010754
Match_columns 502
No_of_seqs 804 out of 4146
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 04:11:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010754.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010754hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0273 Beta-transducin family 100.0 1.3E-79 2.8E-84 557.5 32.4 431 3-475 2-438 (524)
2 KOG0271 Notchless-like WD40 re 100.0 5.8E-44 1.3E-48 317.1 23.8 246 207-476 107-438 (480)
3 KOG0272 U4/U6 small nuclear ri 100.0 3.2E-43 7E-48 316.4 20.7 263 189-475 187-458 (459)
4 KOG0271 Notchless-like WD40 re 100.0 1.8E-41 3.9E-46 301.3 24.7 272 180-475 118-479 (480)
5 KOG0272 U4/U6 small nuclear ri 100.0 2.1E-41 4.6E-46 304.7 19.1 240 213-475 173-416 (459)
6 KOG0286 G-protein beta subunit 100.0 1.2E-36 2.5E-41 262.0 28.7 261 207-475 47-343 (343)
7 KOG0263 Transcription initiati 100.0 1.2E-37 2.5E-42 301.6 22.4 269 204-479 367-651 (707)
8 KOG0279 G protein beta subunit 100.0 1.3E-36 2.9E-41 260.1 25.6 246 206-477 54-313 (315)
9 KOG0282 mRNA splicing factor [ 100.0 1.4E-37 3.1E-42 284.7 19.4 256 198-475 197-503 (503)
10 KOG0279 G protein beta subunit 100.0 4.2E-36 9E-41 257.1 26.3 247 208-476 8-261 (315)
11 KOG0273 Beta-transducin family 100.0 1.5E-34 3.2E-39 264.0 27.2 235 216-476 236-522 (524)
12 KOG0284 Polyadenylation factor 100.0 2.9E-36 6.3E-41 270.4 15.8 250 215-487 96-365 (464)
13 KOG0285 Pleiotropic regulator 100.0 2.8E-35 6.1E-40 259.8 21.0 259 199-483 135-395 (460)
14 KOG0263 Transcription initiati 100.0 2.9E-35 6.4E-40 285.0 22.6 208 207-431 443-652 (707)
15 KOG0295 WD40 repeat-containing 100.0 1.7E-34 3.6E-39 255.7 25.4 248 206-476 141-405 (406)
16 KOG0315 G-protein beta subunit 100.0 5.8E-34 1.3E-38 240.0 25.9 266 190-478 11-289 (311)
17 KOG0284 Polyadenylation factor 100.0 3.3E-35 7.1E-40 263.7 16.6 268 184-475 103-378 (464)
18 KOG0295 WD40 repeat-containing 100.0 1E-33 2.2E-38 250.8 21.4 248 206-477 99-364 (406)
19 KOG0645 WD40 repeat protein [G 100.0 3.3E-32 7.1E-37 232.3 29.6 243 207-476 6-260 (312)
20 KOG0319 WD40-repeat-containing 100.0 3.3E-33 7.3E-38 268.1 23.8 256 200-475 350-617 (775)
21 KOG0265 U5 snRNP-specific prot 100.0 1.1E-32 2.4E-37 238.4 23.5 261 207-491 39-313 (338)
22 KOG0296 Angio-associated migra 100.0 1.2E-31 2.7E-36 237.7 30.2 246 205-475 54-396 (399)
23 KOG0291 WD40-repeat-containing 100.0 2E-31 4.4E-36 256.2 29.5 254 200-478 291-551 (893)
24 KOG0266 WD40 repeat-containing 100.0 4.6E-31 9.9E-36 262.6 31.1 248 208-477 151-409 (456)
25 KOG0293 WD40 repeat-containing 100.0 2.9E-32 6.3E-37 245.0 19.1 258 199-476 208-512 (519)
26 KOG0266 WD40 repeat-containing 100.0 3.6E-31 7.7E-36 263.3 28.4 246 207-475 195-452 (456)
27 cd00200 WD40 WD40 domain, foun 100.0 2.1E-30 4.5E-35 243.7 31.4 245 209-477 3-249 (289)
28 KOG0276 Vesicle coat complex C 100.0 1.8E-31 3.9E-36 251.5 21.9 243 209-475 7-255 (794)
29 KOG0281 Beta-TrCP (transducin 100.0 1.6E-32 3.5E-37 241.6 13.9 251 192-477 210-477 (499)
30 KOG0316 Conserved WD40 repeat- 100.0 5.8E-31 1.3E-35 220.2 21.4 250 202-476 4-256 (307)
31 KOG0318 WD40 repeat stress pro 100.0 7.2E-30 1.6E-34 236.4 30.9 269 187-476 158-559 (603)
32 KOG0315 G-protein beta subunit 100.0 3.1E-30 6.8E-35 217.5 25.9 227 205-449 73-309 (311)
33 cd00200 WD40 WD40 domain, foun 100.0 1.4E-29 3.1E-34 238.0 32.4 245 207-475 43-289 (289)
34 KOG0265 U5 snRNP-specific prot 100.0 3.5E-30 7.7E-35 222.9 25.1 266 183-472 53-333 (338)
35 KOG0285 Pleiotropic regulator 100.0 4.5E-30 9.7E-35 227.1 24.2 268 185-477 159-439 (460)
36 PLN00181 protein SPA1-RELATED; 100.0 2.2E-29 4.8E-34 268.9 34.7 248 211-477 479-738 (793)
37 KOG0645 WD40 repeat protein [G 100.0 4.4E-29 9.5E-34 213.2 27.8 259 191-476 29-310 (312)
38 KOG0276 Vesicle coat complex C 100.0 3.6E-30 7.8E-35 242.7 23.1 239 198-453 34-282 (794)
39 PLN00181 protein SPA1-RELATED; 100.0 7.8E-29 1.7E-33 264.8 35.4 238 214-476 531-792 (793)
40 KOG0286 G-protein beta subunit 100.0 1.5E-29 3.3E-34 218.2 23.8 199 271-476 52-258 (343)
41 KOG0281 Beta-TrCP (transducin 100.0 1.6E-31 3.4E-36 235.3 11.6 234 214-482 196-433 (499)
42 KOG0313 Microtubule binding pr 100.0 2.2E-29 4.7E-34 224.5 24.4 262 191-475 117-416 (423)
43 KOG0277 Peroxisomal targeting 100.0 6.2E-30 1.3E-34 216.4 19.6 240 215-476 60-308 (311)
44 KOG0640 mRNA cleavage stimulat 100.0 1.1E-29 2.3E-34 220.7 20.9 263 204-476 101-425 (430)
45 KOG0291 WD40-repeat-containing 100.0 1.1E-28 2.4E-33 237.5 29.8 243 209-475 259-506 (893)
46 PTZ00421 coronin; Provisional 100.0 2.4E-28 5.1E-33 242.1 32.2 235 209-453 69-316 (493)
47 KOG0278 Serine/threonine kinas 100.0 3.1E-30 6.6E-35 217.6 14.9 246 208-480 52-300 (334)
48 KOG0306 WD40-repeat-containing 100.0 1.9E-28 4.2E-33 235.7 27.9 259 209-475 367-662 (888)
49 KOG1407 WD40 repeat protein [F 100.0 9.5E-29 2.1E-33 210.0 22.3 238 209-472 14-254 (313)
50 KOG0283 WD40 repeat-containing 100.0 7.1E-29 1.5E-33 242.9 24.4 259 209-476 260-575 (712)
51 KOG0772 Uncharacterized conser 100.0 1.3E-28 2.9E-33 227.4 24.0 218 201-430 153-396 (641)
52 KOG0643 Translation initiation 100.0 5.2E-28 1.1E-32 206.2 25.6 243 209-475 4-315 (327)
53 KOG0299 U3 snoRNP-associated p 100.0 9.8E-29 2.1E-33 225.6 21.9 262 208-479 135-412 (479)
54 KOG0318 WD40 repeat stress pro 100.0 1.1E-27 2.5E-32 221.9 28.9 244 206-475 138-390 (603)
55 PTZ00420 coronin; Provisional 100.0 1.9E-27 4.2E-32 236.5 32.6 236 207-453 66-319 (568)
56 KOG0288 WD40 repeat protein Ti 100.0 5.3E-30 1.2E-34 230.7 12.9 251 202-474 162-458 (459)
57 KOG0305 Anaphase promoting com 100.0 3.5E-28 7.7E-33 232.2 25.9 239 212-476 214-460 (484)
58 KOG0275 Conserved WD40 repeat- 100.0 5.1E-30 1.1E-34 223.9 12.0 255 204-474 201-506 (508)
59 KOG0292 Vesicle coat complex C 100.0 3.4E-28 7.4E-33 237.7 25.4 264 186-474 18-318 (1202)
60 KOG0319 WD40-repeat-containing 100.0 8E-29 1.7E-33 238.2 19.7 231 191-429 379-620 (775)
61 KOG0296 Angio-associated migra 100.0 2.4E-27 5.1E-32 210.6 26.1 231 181-428 68-398 (399)
62 KOG0292 Vesicle coat complex C 100.0 4E-28 8.6E-33 237.2 22.1 242 211-476 5-279 (1202)
63 KOG0316 Conserved WD40 repeat- 100.0 1.5E-27 3.2E-32 199.8 21.8 255 193-476 33-298 (307)
64 PTZ00421 coronin; Provisional 100.0 1.2E-26 2.5E-31 230.0 31.4 251 215-477 20-290 (493)
65 KOG0277 Peroxisomal targeting 100.0 1.1E-27 2.5E-32 202.7 20.4 238 219-477 12-265 (311)
66 KOG0973 Histone transcription 100.0 3.9E-27 8.5E-32 236.4 27.0 263 205-475 59-353 (942)
67 KOG0310 Conserved WD40 repeat- 100.0 3.8E-27 8.3E-32 216.8 24.5 240 209-474 62-306 (487)
68 KOG0641 WD40 repeat protein [G 100.0 6.1E-26 1.3E-30 189.0 29.1 254 213-475 30-301 (350)
69 KOG1446 Histone H3 (Lys4) meth 100.0 3.4E-26 7.3E-31 200.3 28.6 259 209-478 8-304 (311)
70 KOG0647 mRNA export protein (c 100.0 9.1E-27 2E-31 202.0 24.5 223 215-453 27-306 (347)
71 KOG0274 Cdc4 and related F-box 100.0 4.5E-27 9.8E-32 233.2 25.9 238 207-476 240-481 (537)
72 KOG0268 Sof1-like rRNA process 100.0 4.8E-28 1E-32 214.7 14.5 244 206-476 57-344 (433)
73 KOG1332 Vesicle coat complex C 100.0 2.3E-27 5.1E-32 199.7 17.1 249 210-479 6-288 (299)
74 KOG0313 Microtubule binding pr 100.0 1E-26 2.2E-31 207.6 21.8 240 213-479 103-378 (423)
75 KOG1407 WD40 repeat protein [F 100.0 2E-26 4.4E-31 195.9 22.4 225 210-453 59-285 (313)
76 KOG0289 mRNA splicing factor [ 100.0 3.3E-26 7.1E-31 207.5 24.7 237 215-477 219-460 (506)
77 KOG0293 WD40 repeat-containing 100.0 1.9E-27 4.1E-32 214.2 16.5 206 208-429 262-514 (519)
78 KOG0641 WD40 repeat protein [G 100.0 2E-25 4.3E-30 185.9 26.5 249 208-476 82-348 (350)
79 KOG0301 Phospholipase A2-activ 100.0 3.3E-26 7.1E-31 218.8 24.2 253 192-477 28-288 (745)
80 PTZ00420 coronin; Provisional 100.0 3.9E-25 8.5E-30 220.1 32.9 221 233-478 50-294 (568)
81 KOG0294 WD40 repeat-containing 99.9 1.2E-25 2.5E-30 196.3 24.4 245 206-479 34-283 (362)
82 KOG0264 Nucleosome remodeling 99.9 4.8E-26 1.1E-30 208.1 22.9 257 208-477 117-404 (422)
83 KOG0306 WD40-repeat-containing 99.9 2.1E-26 4.5E-31 221.8 21.1 217 208-429 447-665 (888)
84 KOG0299 U3 snoRNP-associated p 99.9 7.1E-26 1.5E-30 207.0 22.7 223 212-453 199-438 (479)
85 KOG0973 Histone transcription 99.9 7.7E-26 1.7E-30 227.2 24.4 258 213-475 11-310 (942)
86 KOG0282 mRNA splicing factor [ 99.9 3.5E-27 7.5E-32 216.8 13.0 206 265-478 205-463 (503)
87 KOG0274 Cdc4 and related F-box 99.9 1.3E-25 2.9E-30 222.8 24.5 238 209-477 201-441 (537)
88 KOG0289 mRNA splicing factor [ 99.9 3.1E-25 6.6E-30 201.3 23.6 231 206-453 252-489 (506)
89 KOG0308 Conserved WD40 repeat- 99.9 2.8E-26 6.1E-31 217.7 17.4 234 220-471 29-279 (735)
90 KOG4283 Transcription-coupled 99.9 3.3E-25 7.2E-30 191.6 21.9 221 209-431 37-279 (397)
91 KOG2445 Nuclear pore complex c 99.9 7.1E-25 1.5E-29 190.8 23.4 243 212-475 10-316 (361)
92 KOG0646 WD40 repeat protein [G 99.9 3.4E-25 7.4E-30 203.0 21.3 221 215-453 81-332 (476)
93 KOG0283 WD40 repeat-containing 99.9 1.9E-25 4.1E-30 219.0 20.7 209 201-428 355-576 (712)
94 KOG0300 WD40 repeat-containing 99.9 8.3E-25 1.8E-29 190.9 22.4 282 191-478 162-477 (481)
95 KOG1036 Mitotic spindle checkp 99.9 1.8E-24 3.8E-29 188.6 24.3 218 215-453 13-287 (323)
96 KOG0310 Conserved WD40 repeat- 99.9 7.9E-25 1.7E-29 201.7 23.1 234 215-475 26-266 (487)
97 KOG0300 WD40 repeat-containing 99.9 3.6E-25 7.7E-30 193.2 18.7 228 207-453 140-411 (481)
98 KOG0275 Conserved WD40 repeat- 99.9 5.2E-26 1.1E-30 198.9 13.4 195 274-474 213-420 (508)
99 KOG0278 Serine/threonine kinas 99.9 3.1E-25 6.7E-30 187.5 16.4 202 213-432 98-301 (334)
100 KOG2096 WD40 repeat protein [G 99.9 3.2E-24 6.9E-29 187.5 22.8 247 206-453 77-386 (420)
101 KOG0643 Translation initiation 99.9 4.5E-24 9.8E-29 182.3 22.7 198 271-476 7-219 (327)
102 KOG1408 WD40 repeat protein [F 99.9 1.3E-24 2.8E-29 208.3 20.6 262 209-477 363-713 (1080)
103 KOG0301 Phospholipase A2-activ 99.9 1.7E-24 3.8E-29 207.1 20.8 238 208-475 7-247 (745)
104 KOG0264 Nucleosome remodeling 99.9 2.4E-24 5.2E-29 197.1 19.8 212 207-428 169-404 (422)
105 KOG0640 mRNA cleavage stimulat 99.9 2E-24 4.4E-29 188.0 17.2 206 207-427 164-425 (430)
106 KOG0269 WD40 repeat-containing 99.9 2.6E-24 5.7E-29 208.3 17.7 252 216-487 40-306 (839)
107 KOG0267 Microtubule severing p 99.9 4.9E-25 1.1E-29 211.6 10.9 229 208-453 21-251 (825)
108 KOG0305 Anaphase promoting com 99.9 3.7E-23 8E-28 197.9 23.6 229 219-476 181-418 (484)
109 KOG0308 Conserved WD40 repeat- 99.9 6.6E-24 1.4E-28 201.7 17.2 249 208-478 66-328 (735)
110 KOG1274 WD40 repeat protein [G 99.9 1.5E-22 3.2E-27 199.9 27.1 238 212-453 10-283 (933)
111 KOG1332 Vesicle coat complex C 99.9 3E-23 6.4E-28 175.1 17.9 222 192-428 26-286 (299)
112 KOG1273 WD40 repeat protein [G 99.9 1.1E-22 2.3E-27 177.8 20.9 235 218-478 26-323 (405)
113 KOG0302 Ribosome Assembly prot 99.9 1E-22 2.2E-27 181.9 20.7 253 212-474 148-435 (440)
114 KOG0294 WD40 repeat-containing 99.9 4.2E-22 9.1E-27 174.2 22.6 238 191-449 55-306 (362)
115 KOG1539 WD repeat protein [Gen 99.9 1.5E-22 3.2E-27 197.7 21.9 270 205-483 324-654 (910)
116 KOG0302 Ribosome Assembly prot 99.9 1.1E-22 2.4E-27 181.7 18.6 205 271-481 148-382 (440)
117 KOG0269 WD40 repeat-containing 99.9 2.9E-23 6.4E-28 201.1 15.1 222 216-451 88-320 (839)
118 KOG0772 Uncharacterized conser 99.9 8.8E-23 1.9E-27 189.1 17.2 201 270-477 163-394 (641)
119 KOG0639 Transducin-like enhanc 99.9 1.3E-22 2.8E-27 187.4 16.5 235 216-475 466-702 (705)
120 KOG0267 Microtubule severing p 99.9 1.1E-23 2.5E-28 202.4 8.5 222 226-477 3-226 (825)
121 KOG0639 Transducin-like enhanc 99.9 1.9E-22 4.1E-27 186.2 16.1 241 213-475 417-661 (705)
122 KOG0647 mRNA export protein (c 99.9 1E-21 2.2E-26 170.8 19.4 195 274-476 27-280 (347)
123 KOG1446 Histone H3 (Lys4) meth 99.9 4.1E-21 8.8E-26 168.6 23.2 204 204-428 89-303 (311)
124 KOG0650 WD40 repeat nucleolar 99.9 5.5E-22 1.2E-26 187.0 17.7 253 201-479 386-682 (733)
125 KOG4283 Transcription-coupled 99.9 1.4E-21 3E-26 169.3 18.8 197 272-476 41-275 (397)
126 KOG0270 WD40 repeat-containing 99.9 1.7E-21 3.6E-26 177.8 20.1 254 218-477 176-449 (463)
127 KOG0646 WD40 repeat protein [G 99.9 5.3E-21 1.1E-25 175.7 22.5 194 274-475 81-305 (476)
128 KOG0321 WD40 repeat-containing 99.9 1.7E-21 3.6E-26 185.2 19.8 250 206-476 91-390 (720)
129 KOG2055 WD40 repeat protein [G 99.9 5.9E-21 1.3E-25 175.0 22.5 248 208-476 250-511 (514)
130 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 1.2E-19 2.5E-24 172.7 31.2 242 207-477 23-279 (300)
131 KOG0307 Vesicle coat complex C 99.9 5.6E-22 1.2E-26 200.5 14.5 244 216-476 65-326 (1049)
132 KOG0268 Sof1-like rRNA process 99.9 8.9E-22 1.9E-26 175.1 13.8 200 265-474 57-299 (433)
133 KOG0288 WD40 repeat protein Ti 99.9 2.9E-21 6.2E-26 174.7 16.7 198 207-425 253-458 (459)
134 KOG2106 Uncharacterized conser 99.9 1E-19 2.2E-24 168.6 26.4 231 215-475 246-519 (626)
135 KOG2048 WD40 repeat protein [G 99.9 1.4E-19 3E-24 173.5 27.9 244 208-475 18-273 (691)
136 KOG4378 Nuclear protein COP1 [ 99.9 3.4E-21 7.3E-26 177.9 16.2 218 217-452 81-305 (673)
137 KOG2055 WD40 repeat protein [G 99.9 2.6E-20 5.7E-25 170.8 21.6 223 215-453 213-448 (514)
138 KOG1063 RNA polymerase II elon 99.9 2E-20 4.3E-25 179.5 21.3 250 209-475 261-600 (764)
139 KOG1007 WD repeat protein TSSC 99.9 3.6E-20 7.8E-25 160.2 19.4 253 209-478 57-360 (370)
140 KOG1539 WD repeat protein [Gen 99.9 1.4E-19 3.1E-24 177.1 25.9 248 205-476 192-605 (910)
141 KOG2048 WD40 repeat protein [G 99.9 3.6E-19 7.8E-24 170.7 27.6 241 193-451 41-302 (691)
142 KOG0303 Actin-binding protein 99.9 2.6E-20 5.6E-25 167.6 18.6 234 209-453 75-322 (472)
143 KOG1445 Tumor-specific antigen 99.9 9.8E-21 2.1E-25 179.6 16.5 129 207-346 71-201 (1012)
144 KOG1009 Chromatin assembly com 99.9 1.1E-19 2.3E-24 164.4 22.0 156 215-378 13-187 (434)
145 KOG2096 WD40 repeat protein [G 99.9 6.8E-20 1.5E-24 160.6 20.0 204 271-483 83-314 (420)
146 KOG4328 WD40 protein [Function 99.8 8.5E-20 1.8E-24 167.3 19.3 246 208-474 179-447 (498)
147 KOG1408 WD40 repeat protein [F 99.8 4.4E-20 9.5E-25 177.4 16.9 199 214-429 458-714 (1080)
148 KOG0642 Cell-cycle nuclear pro 99.8 2.9E-20 6.4E-25 174.6 14.9 254 209-479 288-563 (577)
149 TIGR03866 PQQ_ABC_repeats PQQ- 99.8 2.9E-18 6.3E-23 163.0 29.1 221 209-450 67-300 (300)
150 KOG0270 WD40 repeat-containing 99.8 5.9E-20 1.3E-24 167.8 16.0 204 212-433 240-454 (463)
151 KOG2919 Guanine nucleotide-bin 99.8 8.2E-19 1.8E-23 154.2 22.0 241 219-473 53-364 (406)
152 KOG0322 G-protein beta subunit 99.8 1.6E-19 3.5E-24 154.3 17.0 248 203-475 2-321 (323)
153 KOG1036 Mitotic spindle checkp 99.8 4.9E-19 1.1E-23 154.8 19.5 199 199-418 38-294 (323)
154 KOG4328 WD40 protein [Function 99.8 6.3E-19 1.4E-23 161.7 19.2 246 207-476 226-492 (498)
155 KOG0290 Conserved WD40 repeat- 99.8 2.2E-18 4.9E-23 149.3 20.7 230 213-453 94-348 (364)
156 KOG1273 WD40 repeat protein [G 99.8 2E-18 4.3E-23 151.3 19.3 191 277-477 26-226 (405)
157 KOG1524 WD40 repeat-containing 99.8 8E-19 1.7E-23 163.8 17.9 228 213-452 12-239 (737)
158 KOG1063 RNA polymerase II elon 99.8 4.5E-18 9.7E-23 163.5 21.6 254 209-477 355-699 (764)
159 KOG2106 Uncharacterized conser 99.8 7.8E-18 1.7E-22 156.2 22.4 244 204-475 357-624 (626)
160 KOG2445 Nuclear pore complex c 99.8 1.8E-17 3.8E-22 145.0 23.1 204 272-479 11-258 (361)
161 KOG1274 WD40 repeat protein [G 99.8 4.8E-18 1E-22 168.3 22.0 199 272-477 11-262 (933)
162 KOG4378 Nuclear protein COP1 [ 99.8 1.1E-18 2.3E-23 161.5 16.1 236 218-476 37-279 (673)
163 KOG1538 Uncharacterized conser 99.8 5.4E-18 1.2E-22 162.1 19.3 239 206-475 44-291 (1081)
164 KOG0321 WD40 repeat-containing 99.8 6.4E-18 1.4E-22 161.0 19.2 239 220-476 54-346 (720)
165 KOG0307 Vesicle coat complex C 99.8 4.3E-19 9.3E-24 179.9 11.8 210 207-431 108-330 (1049)
166 KOG1034 Transcriptional repres 99.8 8.8E-18 1.9E-22 148.1 18.4 239 213-476 87-382 (385)
167 COG2319 FOG: WD40 repeat [Gene 99.8 4.2E-16 9E-21 155.0 32.2 243 210-476 60-313 (466)
168 KOG0644 Uncharacterized conser 99.8 4.1E-19 8.8E-24 173.7 9.2 225 208-453 183-451 (1113)
169 PRK01742 tolB translocation pr 99.8 2.6E-17 5.6E-22 163.6 21.9 221 207-451 195-426 (429)
170 KOG0642 Cell-cycle nuclear pro 99.8 4.1E-18 8.9E-23 160.3 14.2 229 206-441 335-574 (577)
171 KOG1272 WD40-repeat-containing 99.8 1.1E-18 2.3E-23 160.5 8.4 229 218-476 132-361 (545)
172 KOG1587 Cytoplasmic dynein int 99.8 1.1E-16 2.4E-21 158.1 23.2 245 214-478 241-515 (555)
173 KOG0650 WD40 repeat nucleolar 99.8 3.5E-17 7.5E-22 154.9 18.6 278 187-474 410-732 (733)
174 KOG4227 WD40 repeat protein [G 99.8 8.1E-17 1.8E-21 145.0 19.8 249 209-475 50-385 (609)
175 KOG1524 WD40 repeat-containing 99.8 2.3E-17 5.1E-22 154.1 16.8 193 228-453 76-269 (737)
176 KOG2110 Uncharacterized conser 99.8 9.4E-16 2E-20 137.6 26.2 229 216-476 6-247 (391)
177 KOG0649 WD40 repeat protein [G 99.8 5.4E-16 1.2E-20 131.4 22.8 238 216-476 11-273 (325)
178 COG2319 FOG: WD40 repeat [Gene 99.8 2.7E-15 5.8E-20 149.2 32.4 247 207-478 100-360 (466)
179 KOG1034 Transcriptional repres 99.7 3E-17 6.5E-22 144.8 13.9 207 206-428 126-383 (385)
180 KOG1963 WD40 repeat protein [G 99.7 5.2E-16 1.1E-20 153.7 24.0 245 213-478 203-539 (792)
181 KOG1007 WD repeat protein TSSC 99.7 1.5E-16 3.2E-21 138.0 17.6 208 208-428 115-361 (370)
182 KOG1523 Actin-related protein 99.7 5.6E-16 1.2E-20 136.5 21.1 229 211-453 6-262 (361)
183 KOG0771 Prolactin regulatory e 99.7 1.5E-16 3.3E-21 145.2 16.9 192 278-477 148-354 (398)
184 KOG0290 Conserved WD40 repeat- 99.7 8.4E-16 1.8E-20 133.5 20.3 244 216-481 45-322 (364)
185 KOG0303 Actin-binding protein 99.7 3.4E-16 7.3E-21 141.3 17.6 199 269-476 76-293 (472)
186 KOG0649 WD40 repeat protein [G 99.7 9.2E-15 2E-19 124.0 25.1 232 207-451 54-296 (325)
187 KOG1523 Actin-related protein 99.7 7.6E-16 1.6E-20 135.6 16.2 179 275-453 11-219 (361)
188 KOG2919 Guanine nucleotide-bin 99.7 6.4E-16 1.4E-20 136.2 15.3 193 218-420 161-362 (406)
189 KOG1188 WD40 repeat protein [G 99.7 1.5E-15 3.2E-20 134.9 16.9 184 287-477 41-242 (376)
190 KOG1538 Uncharacterized conser 99.7 2.5E-15 5.4E-20 144.1 19.2 244 217-491 14-282 (1081)
191 KOG1587 Cytoplasmic dynein int 99.7 7.4E-15 1.6E-19 145.3 23.2 197 274-476 242-471 (555)
192 KOG1009 Chromatin assembly com 99.7 7.1E-16 1.5E-20 139.9 14.4 158 274-431 13-198 (434)
193 PRK11028 6-phosphogluconolacto 99.7 8.2E-14 1.8E-18 134.3 29.7 238 215-477 34-304 (330)
194 PRK03629 tolB translocation pr 99.7 2.1E-14 4.6E-19 142.4 25.8 223 207-451 190-428 (429)
195 KOG1188 WD40 repeat protein [G 99.7 2.3E-15 5E-20 133.7 15.9 248 206-475 61-344 (376)
196 KOG1517 Guanine nucleotide bin 99.7 1.4E-14 3.1E-19 145.8 21.5 247 216-476 1110-1380(1387)
197 KOG1517 Guanine nucleotide bin 99.7 2.6E-14 5.7E-19 143.9 23.0 241 213-476 1062-1332(1387)
198 KOG1310 WD40 repeat protein [G 99.6 1.4E-15 3.1E-20 142.7 12.9 210 209-434 44-309 (758)
199 KOG0322 G-protein beta subunit 99.6 7.2E-15 1.6E-19 126.1 15.4 219 208-427 48-322 (323)
200 PRK01742 tolB translocation pr 99.6 2E-14 4.4E-19 142.9 21.1 208 236-475 183-399 (429)
201 KOG2111 Uncharacterized conser 99.6 3.8E-13 8.2E-18 118.8 26.3 230 218-476 8-255 (346)
202 KOG1240 Protein kinase contain 99.6 3.7E-14 7.9E-19 145.0 22.7 270 196-476 1029-1333(1431)
203 PRK04922 tolB translocation pr 99.6 6.2E-14 1.3E-18 139.7 24.0 223 206-450 194-432 (433)
204 KOG1445 Tumor-specific antigen 99.6 1.1E-14 2.3E-19 139.0 16.8 183 234-429 600-799 (1012)
205 KOG0771 Prolactin regulatory e 99.6 7.7E-15 1.7E-19 134.2 15.0 193 219-429 148-355 (398)
206 PRK02889 tolB translocation pr 99.6 1.7E-13 3.7E-18 136.2 23.5 223 207-451 187-425 (427)
207 PRK05137 tolB translocation pr 99.6 2.8E-13 6E-18 135.2 25.0 224 205-451 191-433 (435)
208 KOG1334 WD40 repeat protein [G 99.6 1.4E-14 3.1E-19 134.4 12.7 262 208-476 135-465 (559)
209 KOG2139 WD40 repeat protein [G 99.6 1.5E-12 3.3E-17 116.8 24.9 229 215-452 140-410 (445)
210 KOG2139 WD40 repeat protein [G 99.6 3.6E-13 7.8E-18 120.8 20.3 218 216-453 99-358 (445)
211 PF08662 eIF2A: Eukaryotic tra 99.6 3.9E-13 8.4E-18 117.7 20.0 154 277-436 8-186 (194)
212 KOG2321 WD40 repeat protein [G 99.6 3.1E-13 6.8E-18 127.9 20.2 251 214-473 50-339 (703)
213 KOG1310 WD40 repeat protein [G 99.6 3.2E-14 6.9E-19 133.8 13.4 203 267-476 43-302 (758)
214 KOG2394 WD40 protein DMR-N9 [G 99.6 2.4E-13 5.3E-18 127.7 18.4 168 283-450 182-384 (636)
215 PRK11028 6-phosphogluconolacto 99.6 3.5E-12 7.6E-17 122.9 27.2 224 230-476 5-257 (330)
216 KOG1963 WD40 repeat protein [G 99.6 1.7E-12 3.6E-17 129.2 24.6 247 206-453 48-411 (792)
217 PF08662 eIF2A: Eukaryotic tra 99.5 8.7E-13 1.9E-17 115.5 19.3 146 319-476 9-178 (194)
218 PRK05137 tolB translocation pr 99.5 3.5E-12 7.7E-17 127.3 26.3 195 273-478 200-411 (435)
219 PRK04922 tolB translocation pr 99.5 2.7E-12 5.8E-17 128.0 24.2 194 274-478 203-410 (433)
220 KOG2394 WD40 protein DMR-N9 [G 99.5 1.7E-13 3.7E-18 128.7 14.4 170 226-408 184-384 (636)
221 KOG3881 Uncharacterized conser 99.5 1.4E-12 3E-17 118.3 19.4 226 210-453 100-344 (412)
222 KOG0644 Uncharacterized conser 99.5 1E-14 2.2E-19 143.4 6.0 198 269-475 185-424 (1113)
223 KOG4497 Uncharacterized conser 99.5 3E-12 6.4E-17 113.6 19.8 235 216-476 49-390 (447)
224 KOG2110 Uncharacterized conser 99.5 1E-11 2.2E-16 112.0 23.5 189 218-429 49-249 (391)
225 KOG3881 Uncharacterized conser 99.5 6.6E-12 1.4E-16 114.0 21.6 240 216-476 56-319 (412)
226 PRK00178 tolB translocation pr 99.5 1E-11 2.3E-16 124.1 25.6 223 207-451 190-428 (430)
227 PRK02889 tolB translocation pr 99.5 6.2E-12 1.3E-16 125.0 23.4 191 274-475 195-399 (427)
228 PRK03629 tolB translocation pr 99.5 2E-11 4.4E-16 121.2 26.6 193 274-477 198-404 (429)
229 KOG4227 WD40 repeat protein [G 99.5 4E-12 8.6E-17 115.1 19.0 206 207-427 96-386 (609)
230 TIGR02800 propeller_TolB tol-p 99.5 1.6E-11 3.5E-16 122.6 24.6 221 207-449 181-417 (417)
231 KOG0974 WD-repeat protein WDR6 99.4 3.2E-12 7E-17 129.3 17.7 199 216-429 88-289 (967)
232 KOG1354 Serine/threonine prote 99.4 4.4E-12 9.6E-17 113.1 16.5 246 216-475 26-357 (433)
233 PRK04792 tolB translocation pr 99.4 3.2E-11 7E-16 120.3 24.2 222 208-451 210-447 (448)
234 KOG4547 WD40 repeat-containing 99.4 2.6E-11 5.6E-16 116.0 21.4 228 225-473 3-264 (541)
235 KOG1240 Protein kinase contain 99.4 3.2E-11 7E-16 123.9 21.8 206 267-476 1041-1272(1431)
236 KOG1064 RAVE (regulator of V-A 99.4 1.4E-12 3.1E-17 137.9 11.9 198 210-437 2203-2407(2439)
237 KOG1272 WD40-repeat-containing 99.4 4.8E-13 1E-17 123.7 7.3 196 277-482 132-328 (545)
238 PF02239 Cytochrom_D1: Cytochr 99.4 7.9E-10 1.7E-14 106.7 29.5 242 208-475 29-345 (369)
239 KOG4497 Uncharacterized conser 99.4 9.3E-11 2E-15 104.2 20.9 233 210-453 86-415 (447)
240 TIGR02800 propeller_TolB tol-p 99.4 2.4E-10 5.2E-15 114.1 25.6 186 275-471 190-388 (417)
241 PRK01029 tolB translocation pr 99.4 4.4E-10 9.5E-15 111.3 26.0 225 208-452 177-426 (428)
242 KOG4547 WD40 repeat-containing 99.4 1.8E-10 3.9E-15 110.3 21.9 187 284-475 3-218 (541)
243 KOG1409 Uncharacterized conser 99.3 6.7E-11 1.5E-15 105.8 17.4 250 207-480 16-273 (404)
244 KOG2041 WD40 repeat protein [G 99.3 7.4E-11 1.6E-15 114.8 18.4 229 208-453 64-321 (1189)
245 KOG2321 WD40 repeat protein [G 99.3 8E-11 1.7E-15 112.0 18.0 197 272-475 49-300 (703)
246 PRK00178 tolB translocation pr 99.3 1.2E-09 2.6E-14 109.3 27.4 194 274-478 198-405 (430)
247 KOG2111 Uncharacterized conser 99.3 2.4E-09 5.1E-14 95.2 23.7 157 215-388 94-258 (346)
248 PRK01029 tolB translocation pr 99.3 1.6E-09 3.4E-14 107.4 23.9 195 276-478 186-402 (428)
249 KOG0974 WD-repeat protein WDR6 99.3 2.8E-10 6E-15 115.6 18.4 190 277-476 90-287 (967)
250 KOG1354 Serine/threonine prote 99.3 2.2E-10 4.8E-15 102.5 15.5 214 216-430 85-361 (433)
251 KOG0280 Uncharacterized conser 99.3 2E-09 4.3E-14 94.6 20.7 203 236-453 45-266 (339)
252 PF10282 Lactonase: Lactonase, 99.3 4.2E-08 9.1E-13 94.8 32.4 241 216-476 37-321 (345)
253 PRK04792 tolB translocation pr 99.2 3.8E-09 8.3E-14 105.5 25.6 193 274-477 217-423 (448)
254 PF08513 LisH: LisH; InterPro 99.2 2.1E-12 4.6E-17 71.9 1.1 27 7-33 1-27 (27)
255 PF02239 Cytochrom_D1: Cytochr 99.2 1.4E-08 3.1E-13 98.0 26.3 190 230-437 9-211 (369)
256 KOG0280 Uncharacterized conser 99.2 2.8E-09 6.1E-14 93.6 17.9 225 214-451 68-312 (339)
257 PF10282 Lactonase: Lactonase, 99.2 3.8E-07 8.2E-12 88.2 34.5 226 216-448 87-345 (345)
258 KOG2315 Predicted translation 99.2 1.4E-08 3.1E-13 96.8 22.9 226 219-476 129-389 (566)
259 KOG3914 WD repeat protein WDR4 99.1 1.2E-09 2.6E-14 100.1 14.8 163 219-395 66-232 (390)
260 KOG2041 WD40 repeat protein [G 99.1 2.2E-09 4.8E-14 104.8 17.2 234 216-453 15-271 (1189)
261 PF04762 IKI3: IKI3 family; I 99.1 3.8E-08 8.2E-13 105.5 27.8 236 214-476 74-378 (928)
262 KOG1334 WD40 repeat protein [G 99.1 2.6E-10 5.7E-15 106.5 9.8 211 208-429 225-467 (559)
263 PF15492 Nbas_N: Neuroblastoma 99.1 1.1E-07 2.4E-12 84.0 25.1 208 221-441 3-272 (282)
264 COG5170 CDC55 Serine/threonine 99.1 3.3E-09 7.1E-14 93.9 15.6 245 216-474 27-364 (460)
265 KOG0309 Conserved WD40 repeat- 99.1 3.6E-10 7.8E-15 110.5 10.4 244 216-475 25-337 (1081)
266 PF04762 IKI3: IKI3 family; I 99.1 7.4E-08 1.6E-12 103.3 28.9 255 214-479 119-458 (928)
267 KOG1064 RAVE (regulator of V-A 99.1 4.4E-10 9.6E-15 119.7 11.5 182 275-477 2209-2398(2439)
268 KOG2315 Predicted translation 99.1 3.5E-08 7.5E-13 94.3 23.0 220 213-453 163-413 (566)
269 KOG2695 WD40 repeat protein [G 99.1 1E-09 2.3E-14 98.3 11.0 169 281-451 218-403 (425)
270 KOG1409 Uncharacterized conser 99.1 1.4E-08 2.9E-13 91.3 17.1 160 215-387 68-271 (404)
271 PLN02919 haloacid dehalogenase 99.0 3.3E-07 7.1E-12 100.2 30.9 244 219-476 571-887 (1057)
272 KOG4190 Uncharacterized conser 99.0 8.8E-10 1.9E-14 104.5 8.7 218 207-437 727-957 (1034)
273 COG2706 3-carboxymuconate cycl 99.0 1.9E-06 4.1E-11 78.7 29.5 240 213-474 37-318 (346)
274 KOG1832 HIV-1 Vpr-binding prot 99.0 3.7E-10 8.1E-15 112.5 5.1 214 207-453 1093-1314(1516)
275 PRK04043 tolB translocation pr 99.0 2.1E-07 4.7E-12 91.6 24.3 190 276-478 189-399 (419)
276 PRK04043 tolB translocation pr 99.0 3.7E-07 8.1E-12 90.0 25.2 190 217-429 189-401 (419)
277 KOG0309 Conserved WD40 repeat- 99.0 2E-09 4.4E-14 105.4 8.8 205 209-429 108-340 (1081)
278 KOG3914 WD repeat protein WDR4 98.9 1.1E-08 2.4E-13 93.8 11.7 159 277-437 65-232 (390)
279 PLN02919 haloacid dehalogenase 98.9 6.5E-07 1.4E-11 98.0 27.5 213 218-432 626-892 (1057)
280 TIGR02658 TTQ_MADH_Hv methylam 98.9 6.3E-06 1.4E-10 78.1 30.4 232 223-475 53-328 (352)
281 PF08450 SGL: SMP-30/Gluconola 98.9 6.5E-06 1.4E-10 75.7 29.9 209 220-453 4-238 (246)
282 COG2706 3-carboxymuconate cycl 98.9 4.2E-06 9.1E-11 76.5 27.2 221 236-478 15-273 (346)
283 COG4946 Uncharacterized protei 98.9 4.5E-07 9.8E-12 85.0 21.0 174 223-417 327-507 (668)
284 COG5354 Uncharacterized protei 98.9 8.1E-07 1.8E-11 84.2 22.4 249 216-491 72-362 (561)
285 KOG4532 WD40-like repeat conta 98.9 4.6E-07 1E-11 79.0 19.1 218 219-453 71-315 (344)
286 KOG4190 Uncharacterized conser 98.9 3.8E-09 8.2E-14 100.3 6.6 168 269-438 730-916 (1034)
287 KOG2066 Vacuolar assembly/sort 98.9 1.9E-07 4.1E-12 93.1 18.6 175 276-474 41-230 (846)
288 KOG2695 WD40 repeat protein [G 98.8 7.3E-09 1.6E-13 93.0 7.6 157 220-396 216-386 (425)
289 COG4946 Uncharacterized protei 98.8 2.3E-06 5E-11 80.4 24.0 218 224-453 275-501 (668)
290 KOG1912 WD40 repeat protein [G 98.8 6.8E-07 1.5E-11 88.7 21.1 237 218-478 18-305 (1062)
291 KOG2314 Translation initiation 98.8 1.2E-06 2.7E-11 83.7 21.9 237 216-477 250-525 (698)
292 PF00400 WD40: WD domain, G-be 98.8 1.7E-08 3.7E-13 63.1 6.1 38 389-426 2-39 (39)
293 COG5170 CDC55 Serine/threonine 98.8 1E-07 2.2E-12 84.6 12.5 205 274-486 26-318 (460)
294 PF00400 WD40: WD domain, G-be 98.8 1.8E-08 4E-13 63.0 5.5 37 207-243 3-39 (39)
295 PF07433 DUF1513: Protein of u 98.7 4E-05 8.6E-10 70.2 27.6 218 218-452 7-269 (305)
296 TIGR03300 assembly_YfgL outer 98.7 4.8E-06 1E-10 81.9 23.2 221 227-474 145-376 (377)
297 KOG1912 WD40 repeat protein [G 98.7 7.1E-06 1.5E-10 81.7 23.2 121 205-342 45-183 (1062)
298 COG5354 Uncharacterized protei 98.7 1.8E-06 3.8E-11 82.0 18.3 216 215-453 32-287 (561)
299 KOG3617 WD40 and TPR repeat-co 98.7 1.6E-06 3.5E-11 86.9 18.7 107 220-345 20-131 (1416)
300 KOG1920 IkappaB kinase complex 98.7 4.2E-06 9E-11 87.5 22.3 239 216-481 69-371 (1265)
301 KOG4532 WD40-like repeat conta 98.7 3.2E-06 6.9E-11 73.9 18.1 183 229-429 130-332 (344)
302 KOG4714 Nucleoporin [Nuclear s 98.6 1.3E-07 2.9E-12 81.9 8.1 145 285-429 100-255 (319)
303 KOG2066 Vacuolar assembly/sort 98.6 4.6E-06 1E-10 83.5 18.8 138 226-386 82-233 (846)
304 KOG1275 PAB-dependent poly(A) 98.6 1.4E-06 3.1E-11 88.1 14.9 179 226-426 146-340 (1118)
305 KOG1832 HIV-1 Vpr-binding prot 98.5 9.4E-08 2E-12 95.9 5.1 172 272-453 1099-1279(1516)
306 PF15492 Nbas_N: Neuroblastoma 98.5 0.00014 3E-09 64.8 23.9 188 280-476 3-258 (282)
307 PF13360 PQQ_2: PQQ-like domai 98.5 6.8E-05 1.5E-09 68.5 23.6 187 226-435 35-237 (238)
308 TIGR02658 TTQ_MADH_Hv methylam 98.5 9E-05 2E-09 70.4 24.5 198 219-437 108-339 (352)
309 KOG0882 Cyclophilin-related pe 98.5 6.6E-07 1.4E-11 83.5 9.8 206 213-436 7-239 (558)
310 KOG1920 IkappaB kinase complex 98.5 4.9E-05 1.1E-09 79.8 24.2 179 274-453 68-302 (1265)
311 KOG2314 Translation initiation 98.5 6.2E-06 1.3E-10 79.1 16.1 176 276-453 212-406 (698)
312 TIGR03300 assembly_YfgL outer 98.5 8.4E-05 1.8E-09 73.1 24.9 215 226-475 104-336 (377)
313 KOG2114 Vacuolar assembly/sort 98.5 5.3E-05 1.1E-09 76.7 23.1 190 209-403 58-261 (933)
314 KOG0882 Cyclophilin-related pe 98.5 2.6E-06 5.5E-11 79.6 12.4 212 208-436 46-313 (558)
315 PF13360 PQQ_2: PQQ-like domai 98.5 9.8E-05 2.1E-09 67.4 23.0 177 285-476 35-229 (238)
316 KOG4714 Nucleoporin [Nuclear s 98.4 1.4E-06 3E-11 75.7 9.3 162 310-477 84-254 (319)
317 PF08450 SGL: SMP-30/Gluconola 98.4 0.00031 6.8E-09 64.5 25.4 169 279-453 4-196 (246)
318 KOG2114 Vacuolar assembly/sort 98.4 6.1E-05 1.3E-09 76.3 21.6 201 222-441 30-257 (933)
319 KOG1645 RING-finger-containing 98.4 3.3E-05 7.2E-10 71.4 17.2 78 271-348 190-269 (463)
320 KOG1275 PAB-dependent poly(A) 98.3 1.4E-05 2.9E-10 81.2 15.1 181 285-475 146-340 (1118)
321 PF08596 Lgl_C: Lethal giant l 98.3 0.0003 6.5E-09 68.5 23.4 236 217-453 3-319 (395)
322 KOG3621 WD40 repeat-containing 98.2 1.3E-05 2.8E-10 79.3 12.3 147 214-376 32-189 (726)
323 PF04841 Vps16_N: Vps16, N-ter 98.2 0.0012 2.6E-08 65.1 25.8 172 275-453 81-272 (410)
324 KOG1008 Uncharacterized conser 98.2 3.5E-07 7.7E-12 89.0 1.1 176 275-453 57-256 (783)
325 PF11768 DUF3312: Protein of u 98.2 3.1E-05 6.8E-10 75.6 13.0 73 213-304 257-329 (545)
326 KOG1008 Uncharacterized conser 98.1 1.6E-06 3.4E-11 84.6 3.1 196 216-428 57-275 (783)
327 PF04053 Coatomer_WDAD: Coatom 98.1 0.00041 8.9E-09 68.5 19.2 144 314-478 31-174 (443)
328 COG0823 TolB Periplasmic compo 98.1 0.00048 1E-08 67.8 19.5 222 209-450 186-423 (425)
329 PRK11138 outer membrane biogen 98.1 0.0021 4.5E-08 63.6 24.1 221 227-474 160-391 (394)
330 PF11768 DUF3312: Protein of u 98.1 4.4E-05 9.4E-10 74.6 11.5 76 272-348 257-332 (545)
331 PF04053 Coatomer_WDAD: Coatom 98.0 0.00095 2.1E-08 65.9 19.6 220 211-474 28-259 (443)
332 KOG1645 RING-finger-containing 97.9 0.00045 9.6E-09 64.2 15.3 79 208-304 186-266 (463)
333 PF00930 DPPIV_N: Dipeptidyl p 97.9 0.0031 6.7E-08 61.3 22.4 248 202-453 29-340 (353)
334 smart00667 LisH Lissencephaly 97.9 3.6E-06 7.9E-11 50.5 1.2 31 6-36 3-33 (34)
335 PF06977 SdiA-regulated: SdiA- 97.9 0.0091 2E-07 54.1 22.8 179 274-453 21-234 (248)
336 PF04841 Vps16_N: Vps16, N-ter 97.9 0.002 4.3E-08 63.6 19.9 148 297-453 62-229 (410)
337 PF06977 SdiA-regulated: SdiA- 97.9 0.0087 1.9E-07 54.2 22.2 198 209-425 15-247 (248)
338 PF03178 CPSF_A: CPSF A subuni 97.8 0.011 2.4E-07 56.6 23.8 184 286-474 42-262 (321)
339 KOG3621 WD40 repeat-containing 97.8 0.00038 8.2E-09 69.3 13.5 198 276-480 35-247 (726)
340 PF07433 DUF1513: Protein of u 97.8 0.026 5.6E-07 52.1 24.3 190 276-475 6-245 (305)
341 PF08553 VID27: VID27 cytoplas 97.8 0.00085 1.8E-08 70.0 16.3 135 334-478 501-648 (794)
342 KOG4640 Anaphase-promoting com 97.8 0.00015 3.2E-09 71.3 9.7 92 275-366 21-114 (665)
343 PRK11138 outer membrane biogen 97.7 0.0042 9.2E-08 61.4 19.8 182 229-427 207-393 (394)
344 smart00320 WD40 WD40 repeats. 97.7 0.00011 2.4E-09 44.7 5.5 38 389-426 3-40 (40)
345 PF06433 Me-amine-dh_H: Methyl 97.7 0.027 5.8E-07 52.7 23.0 59 379-438 270-330 (342)
346 smart00320 WD40 WD40 repeats. 97.7 9.5E-05 2.1E-09 44.9 5.1 37 207-243 4-40 (40)
347 PF02897 Peptidase_S9_N: Proly 97.7 0.075 1.6E-06 53.0 30.3 217 217-453 125-383 (414)
348 PF08596 Lgl_C: Lethal giant l 97.7 0.008 1.7E-07 58.7 20.2 201 207-419 78-327 (395)
349 KOG4649 PQQ (pyrrolo-quinoline 97.6 0.0045 9.8E-08 54.5 15.9 113 327-440 23-135 (354)
350 KOG4649 PQQ (pyrrolo-quinoline 97.6 0.023 4.9E-07 50.3 19.9 142 227-387 23-166 (354)
351 PRK13616 lipoprotein LpqB; Pro 97.6 0.0065 1.4E-07 62.6 19.7 184 216-422 350-562 (591)
352 COG3391 Uncharacterized conser 97.6 0.032 7E-07 54.7 23.6 215 219-453 77-311 (381)
353 COG0823 TolB Periplasmic compo 97.6 0.0023 5E-08 63.1 15.1 176 275-453 193-382 (425)
354 KOG4640 Anaphase-promoting com 97.6 0.00038 8.3E-09 68.4 9.4 92 358-450 21-115 (665)
355 PRK02888 nitrous-oxide reducta 97.6 0.017 3.8E-07 58.4 21.0 147 282-429 200-405 (635)
356 PF08553 VID27: VID27 cytoplas 97.5 0.0036 7.8E-08 65.4 16.5 142 285-427 492-646 (794)
357 PF00930 DPPIV_N: Dipeptidyl p 97.5 0.025 5.4E-07 54.9 21.7 210 224-453 1-293 (353)
358 PF14783 BBS2_Mid: Ciliary BBS 97.5 0.015 3.2E-07 44.8 15.4 100 318-423 2-109 (111)
359 KOG3617 WD40 and TPR repeat-co 97.5 0.00091 2E-08 67.9 11.2 109 277-386 18-131 (1416)
360 PF14783 BBS2_Mid: Ciliary BBS 97.5 0.0061 1.3E-07 46.8 13.0 99 277-381 2-109 (111)
361 PF14655 RAB3GAP2_N: Rab3 GTPa 97.4 0.16 3.4E-06 49.7 26.4 98 220-325 6-118 (415)
362 PF00780 CNH: CNH domain; Int 97.3 0.08 1.7E-06 49.4 21.5 146 284-435 5-172 (275)
363 KOG2079 Vacuolar assembly/sort 97.3 0.0037 8.1E-08 65.5 13.0 101 226-344 98-202 (1206)
364 COG3391 Uncharacterized conser 97.3 0.14 3E-06 50.3 23.7 177 276-453 75-265 (381)
365 PRK02888 nitrous-oxide reducta 97.3 0.018 3.9E-07 58.3 17.3 132 283-417 285-450 (635)
366 cd00216 PQQ_DH Dehydrogenases 97.2 0.16 3.5E-06 51.6 23.4 128 329-470 303-459 (488)
367 KOG2395 Protein involved in va 97.2 0.047 1E-06 53.2 17.7 142 284-427 343-499 (644)
368 PF03178 CPSF_A: CPSF A subuni 97.1 0.11 2.4E-06 49.7 20.7 182 227-425 42-262 (321)
369 KOG2395 Protein involved in va 97.1 0.016 3.4E-07 56.4 13.6 140 326-476 344-499 (644)
370 PRK13616 lipoprotein LpqB; Pro 97.1 0.028 6E-07 58.0 16.6 170 275-450 350-550 (591)
371 COG3490 Uncharacterized protei 97.0 0.23 5E-06 44.8 21.4 230 219-474 71-345 (366)
372 KOG2079 Vacuolar assembly/sort 97.0 0.003 6.5E-08 66.2 9.0 96 285-380 98-199 (1206)
373 PF05096 Glu_cyclase_2: Glutam 97.0 0.27 5.8E-06 44.6 22.4 181 217-417 46-249 (264)
374 KOG4499 Ca2+-binding protein R 96.9 0.13 2.8E-06 45.0 16.8 144 275-451 109-264 (310)
375 COG3386 Gluconolactonase [Carb 96.9 0.35 7.6E-06 45.5 21.3 142 275-417 111-274 (307)
376 KOG2444 WD40 repeat protein [G 96.9 0.0033 7.1E-08 54.5 6.8 103 327-429 70-178 (238)
377 COG3386 Gluconolactonase [Carb 96.8 0.3 6.5E-06 46.0 19.8 207 221-450 30-264 (307)
378 cd00216 PQQ_DH Dehydrogenases 96.7 0.42 9.1E-06 48.7 22.1 196 227-436 61-327 (488)
379 PF14583 Pectate_lyase22: Olig 96.7 0.44 9.5E-06 45.7 20.3 173 280-453 41-250 (386)
380 PHA02713 hypothetical protein; 96.7 0.04 8.7E-07 56.9 14.6 153 285-440 351-545 (557)
381 PF12894 Apc4_WD40: Anaphase-p 96.7 0.0065 1.4E-07 39.0 5.5 34 274-307 11-44 (47)
382 PF05694 SBP56: 56kDa selenium 96.6 0.76 1.6E-05 44.6 22.4 194 227-429 87-343 (461)
383 PF00780 CNH: CNH domain; Int 96.6 0.62 1.3E-05 43.4 24.6 207 217-439 37-266 (275)
384 PF07995 GSDH: Glucose / Sorbo 96.6 0.73 1.6E-05 44.2 25.6 222 218-453 4-318 (331)
385 COG3204 Uncharacterized protei 96.6 0.51 1.1E-05 43.0 18.5 161 212-388 82-265 (316)
386 PF12894 Apc4_WD40: Anaphase-p 96.5 0.01 2.2E-07 38.1 5.6 29 216-244 12-40 (47)
387 PF14870 PSII_BNR: Photosynthe 96.5 0.5 1.1E-05 44.3 19.1 152 311-474 140-301 (302)
388 KOG3630 Nuclear pore complex, 96.2 0.045 9.7E-07 58.1 11.3 136 316-453 101-256 (1405)
389 KOG1916 Nuclear protein, conta 96.2 0.0074 1.6E-07 62.1 5.2 171 273-476 131-322 (1283)
390 PF06433 Me-amine-dh_H: Methyl 96.1 0.77 1.7E-05 43.2 17.6 156 228-397 148-331 (342)
391 KOG4441 Proteins containing BT 96.1 0.36 7.9E-06 49.9 17.0 188 226-432 332-550 (571)
392 KOG1897 Damage-specific DNA bi 95.9 2.9 6.3E-05 44.5 25.6 135 316-453 715-881 (1096)
393 PF02897 Peptidase_S9_N: Proly 95.9 2.1 4.5E-05 42.6 25.2 165 277-442 126-326 (414)
394 PF15390 DUF4613: Domain of un 95.9 0.27 5.8E-06 49.0 14.0 145 314-474 18-183 (671)
395 KOG2444 WD40 repeat protein [G 95.8 0.042 9.1E-07 47.8 7.6 104 227-345 70-177 (238)
396 PRK13684 Ycf48-like protein; P 95.6 2.2 4.8E-05 41.0 20.0 150 315-475 172-329 (334)
397 PF12234 Rav1p_C: RAVE protein 95.6 0.61 1.3E-05 48.0 16.0 108 277-385 32-155 (631)
398 KOG2280 Vacuolar assembly/sort 95.6 0.72 1.6E-05 47.4 16.1 155 296-453 64-272 (829)
399 PF15390 DUF4613: Domain of un 95.6 1.1 2.3E-05 45.0 16.9 126 213-345 54-186 (671)
400 KOG1897 Damage-specific DNA bi 95.5 3.2 7E-05 44.2 20.8 202 205-425 757-1001(1096)
401 PF10647 Gmad1: Lipoprotein Lp 95.3 2.3 5E-05 39.0 18.6 148 317-475 25-192 (253)
402 TIGR02604 Piru_Ver_Nterm putat 95.1 1.1 2.5E-05 43.6 16.1 136 316-453 14-196 (367)
403 TIGR03075 PQQ_enz_alc_DH PQQ-d 95.1 4.7 0.0001 41.5 22.2 200 227-434 69-339 (527)
404 PF08728 CRT10: CRT10; InterP 95.1 0.97 2.1E-05 47.1 15.7 156 227-385 49-245 (717)
405 PF10647 Gmad1: Lipoprotein Lp 95.1 1.7 3.7E-05 39.9 16.2 144 275-420 24-187 (253)
406 PF08728 CRT10: CRT10; InterP 95.0 2.1 4.5E-05 44.7 17.9 109 366-478 112-245 (717)
407 COG3490 Uncharacterized protei 94.9 2.8 6.1E-05 38.1 16.6 200 199-426 103-346 (366)
408 KOG2377 Uncharacterized conser 94.9 0.46 9.9E-06 45.8 11.7 139 277-417 25-172 (657)
409 PF05096 Glu_cyclase_2: Glutam 94.9 3 6.4E-05 38.0 24.9 174 276-453 46-243 (264)
410 PLN00033 photosystem II stabil 94.7 3.4 7.4E-05 40.6 17.9 145 277-425 241-396 (398)
411 KOG1916 Nuclear protein, conta 94.7 0.022 4.8E-07 58.8 2.9 204 209-429 126-375 (1283)
412 KOG3630 Nuclear pore complex, 94.7 0.34 7.4E-06 51.9 11.4 141 275-416 101-261 (1405)
413 TIGR02604 Piru_Ver_Nterm putat 94.7 1.6 3.4E-05 42.7 15.7 142 275-419 14-204 (367)
414 COG3204 Uncharacterized protei 94.7 3.5 7.5E-05 37.8 17.0 117 313-429 83-211 (316)
415 PHA03098 kelch-like protein; P 94.6 1.2 2.6E-05 46.1 15.6 145 285-432 342-515 (534)
416 KOG4441 Proteins containing BT 94.6 2.4 5.2E-05 44.0 17.4 146 285-432 332-503 (571)
417 PF10168 Nup88: Nuclear pore c 94.6 0.87 1.9E-05 48.2 14.2 92 316-429 85-180 (717)
418 PRK10115 protease 2; Provision 94.5 7.9 0.00017 41.3 31.6 192 216-428 127-344 (686)
419 TIGR03075 PQQ_enz_alc_DH PQQ-d 94.3 6 0.00013 40.7 19.4 151 286-438 69-289 (527)
420 PF10168 Nup88: Nuclear pore c 94.3 7.9 0.00017 41.2 20.4 88 216-304 85-179 (717)
421 TIGR03118 PEPCTERM_chp_1 conse 94.2 4.7 0.0001 37.3 25.2 231 217-453 24-310 (336)
422 KOG2247 WD40 repeat-containing 94.1 0.0052 1.1E-07 59.0 -2.9 142 276-419 36-179 (615)
423 PF12234 Rav1p_C: RAVE protein 94.0 2.4 5.2E-05 43.8 15.5 109 317-427 31-155 (631)
424 PHA02790 Kelch-like protein; P 93.9 2.9 6.3E-05 42.5 16.3 142 285-432 318-474 (480)
425 KOG3616 Selective LIM binding 93.9 1.1 2.3E-05 46.0 12.4 33 216-248 15-47 (1636)
426 PHA02713 hypothetical protein; 93.5 2.5 5.4E-05 43.8 15.1 142 285-429 303-489 (557)
427 COG5167 VID27 Protein involved 93.4 1.8 4E-05 42.5 12.7 150 325-486 477-642 (776)
428 PF05935 Arylsulfotrans: Aryls 93.4 5.1 0.00011 40.7 16.7 143 294-440 126-313 (477)
429 KOG4460 Nuclear pore complex, 93.2 3.7 8E-05 40.6 14.3 95 317-432 105-202 (741)
430 COG3823 Glutamine cyclotransfe 93.2 3.4 7.3E-05 35.8 12.5 172 226-416 55-247 (262)
431 PF14727 PHTB1_N: PTHB1 N-term 93.1 9.6 0.00021 37.6 17.6 142 285-427 36-203 (418)
432 PF10313 DUF2415: Uncharacteri 93.0 0.36 7.8E-06 30.0 4.9 31 216-246 1-34 (43)
433 PHA03098 kelch-like protein; P 93.0 4.2 9.1E-05 42.0 16.1 146 285-433 294-469 (534)
434 KOG2247 WD40 repeat-containing 92.9 0.012 2.6E-07 56.6 -2.6 134 318-453 37-172 (615)
435 PF10313 DUF2415: Uncharacteri 92.8 0.56 1.2E-05 29.2 5.5 31 399-429 1-34 (43)
436 PF14583 Pectate_lyase22: Olig 92.6 10 0.00023 36.6 25.1 250 202-477 66-381 (386)
437 TIGR03074 PQQ_membr_DH membran 92.4 3.2 7E-05 44.5 14.1 110 327-437 194-353 (764)
438 PF12768 Rax2: Cortical protei 92.3 5.1 0.00011 37.2 13.7 114 337-451 16-147 (281)
439 TIGR03074 PQQ_membr_DH membran 92.2 19 0.00042 38.7 24.3 151 286-437 260-486 (764)
440 COG5167 VID27 Protein involved 92.2 8.4 0.00018 38.1 15.2 142 284-428 477-632 (776)
441 KOG4499 Ca2+-binding protein R 92.1 3.6 7.9E-05 36.3 11.5 92 277-368 160-264 (310)
442 COG5290 IkappaB kinase complex 92.0 2.4 5.2E-05 44.0 11.9 131 278-409 205-347 (1243)
443 PF07569 Hira: TUP1-like enhan 92.0 1.6 3.4E-05 39.1 9.8 71 282-353 18-103 (219)
444 PLN00033 photosystem II stabil 91.5 15 0.00033 36.1 23.2 133 318-453 241-383 (398)
445 COG5290 IkappaB kinase complex 90.6 10 0.00022 39.7 14.6 90 362-453 251-349 (1243)
446 PF14870 PSII_BNR: Photosynthe 90.3 16 0.00035 34.3 28.3 228 216-471 17-255 (302)
447 PF07569 Hira: TUP1-like enhan 90.2 1.8 3.9E-05 38.6 8.4 84 223-310 18-101 (219)
448 PF12657 TFIIIC_delta: Transcr 90.1 3.4 7.3E-05 35.4 9.8 31 275-305 86-122 (173)
449 KOG1983 Tomosyn and related SN 90.1 12 0.00026 41.5 16.1 30 217-246 37-66 (993)
450 PF14655 RAB3GAP2_N: Rab3 GTPa 89.6 4.2 9.2E-05 40.0 11.0 88 308-395 300-407 (415)
451 KOG1900 Nuclear pore complex, 89.5 8.7 0.00019 42.6 13.9 137 293-429 96-273 (1311)
452 PF07995 GSDH: Glucose / Sorbo 88.9 15 0.00032 35.3 14.2 102 317-420 3-135 (331)
453 KOG2377 Uncharacterized conser 88.8 3.8 8.2E-05 39.8 9.7 120 214-348 65-188 (657)
454 KOG1898 Splicing factor 3b, su 88.8 40 0.00087 36.8 17.7 128 337-478 912-1047(1205)
455 PF13449 Phytase-like: Esteras 88.6 23 0.0005 33.9 17.9 118 216-335 20-166 (326)
456 COG1520 FOG: WD40-like repeat 88.3 26 0.00057 34.2 16.5 146 288-435 70-224 (370)
457 KOG2280 Vacuolar assembly/sort 88.1 12 0.00025 39.0 13.0 51 336-387 63-113 (829)
458 PF14781 BBS2_N: Ciliary BBSom 88.1 12 0.00027 30.0 12.5 111 279-391 3-130 (136)
459 PF10214 Rrn6: RNA polymerase 88.0 44 0.00095 36.3 26.5 154 273-429 78-277 (765)
460 TIGR02276 beta_rpt_yvtn 40-res 87.9 2.8 6.2E-05 25.7 5.9 40 408-448 1-41 (42)
461 PF11715 Nup160: Nucleoporin N 87.5 2.8 6.1E-05 43.5 8.9 38 400-437 216-257 (547)
462 PF14781 BBS2_N: Ciliary BBSom 87.2 14 0.0003 29.7 14.0 121 220-351 3-131 (136)
463 PF11715 Nup160: Nucleoporin N 87.2 3.9 8.4E-05 42.5 9.8 73 284-356 156-259 (547)
464 COG4590 ABC-type uncharacteriz 87.2 3.3 7.1E-05 40.2 8.1 157 274-433 220-391 (733)
465 KOG0783 Uncharacterized conser 86.9 23 0.00051 37.5 14.4 43 204-250 219-261 (1267)
466 PLN02153 epithiospecifier prot 86.4 32 0.0007 33.1 21.5 145 285-432 85-288 (341)
467 PRK10115 protease 2; Provision 86.2 52 0.0011 35.3 26.5 189 276-477 128-344 (686)
468 PF12657 TFIIIC_delta: Transcr 85.6 5.3 0.00011 34.2 8.2 35 441-476 86-120 (173)
469 PHA02790 Kelch-like protein; P 85.4 22 0.00048 36.2 13.9 89 285-377 362-456 (480)
470 PF12768 Rax2: Cortical protei 84.7 18 0.00038 33.7 11.6 93 237-346 16-124 (281)
471 PF14761 HPS3_N: Hermansky-Pud 84.1 29 0.00063 30.6 15.1 48 287-335 29-79 (215)
472 PRK13684 Ycf48-like protein; P 83.6 43 0.00093 32.2 26.4 97 356-453 171-272 (334)
473 PF07676 PD40: WD40-like Beta 83.4 5 0.00011 24.2 5.3 30 396-425 6-38 (39)
474 COG1520 FOG: WD40-like repeat 82.7 21 0.00046 34.8 12.2 108 329-437 70-180 (370)
475 PF10395 Utp8: Utp8 family; I 82.0 71 0.0015 33.5 21.3 210 215-437 71-314 (670)
476 PF05935 Arylsulfotrans: Aryls 81.7 64 0.0014 32.8 15.8 115 280-397 153-312 (477)
477 KOG4460 Nuclear pore complex, 81.7 15 0.00034 36.5 10.1 89 216-304 104-198 (741)
478 PLN02193 nitrile-specifier pro 81.6 64 0.0014 32.8 20.2 146 285-433 228-415 (470)
479 KOG2659 LisH motif-containing 81.6 0.94 2E-05 39.9 1.9 63 3-65 23-86 (228)
480 TIGR03548 mutarot_permut cycli 81.6 50 0.0011 31.5 15.6 93 285-377 123-233 (323)
481 PF10214 Rrn6: RNA polymerase 81.3 87 0.0019 34.1 22.9 169 214-387 78-277 (765)
482 TIGR02276 beta_rpt_yvtn 40-res 80.8 10 0.00022 23.1 6.1 31 325-355 1-32 (42)
483 KOG3616 Selective LIM binding 79.3 5.8 0.00013 41.0 6.7 67 275-343 15-81 (1636)
484 COG4590 ABC-type uncharacteriz 78.6 7.8 0.00017 37.7 7.0 170 208-391 213-391 (733)
485 PF07676 PD40: WD40-like Beta 78.2 9.7 0.00021 22.9 5.3 30 213-242 6-38 (39)
486 PF14727 PHTB1_N: PTHB1 N-term 78.2 75 0.0016 31.5 27.6 58 287-344 146-203 (418)
487 TIGR03032 conserved hypothetic 77.8 63 0.0014 30.4 22.5 87 362-453 207-317 (335)
488 COG1506 DAP2 Dipeptidyl aminop 77.5 92 0.002 32.9 15.5 159 274-453 59-228 (620)
489 TIGR03606 non_repeat_PQQ dehyd 77.4 83 0.0018 31.6 15.5 66 210-286 24-90 (454)
490 PF08801 Nucleoporin_N: Nup133 77.1 82 0.0018 31.4 16.2 30 400-429 191-220 (422)
491 PF11635 Med16: Mediator compl 75.0 1.3E+02 0.0028 32.7 18.5 87 315-423 259-345 (753)
492 PF02333 Phytase: Phytase; In 74.4 89 0.0019 30.5 23.6 183 284-475 66-288 (381)
493 KOG2727 Rab3 GTPase-activating 73.2 37 0.00081 36.4 10.6 37 288-324 102-138 (1244)
494 PF13449 Phytase-like: Esteras 72.9 90 0.002 29.8 17.8 56 398-453 146-227 (326)
495 PF02333 Phytase: Phytase; In 70.3 1.1E+02 0.0024 29.8 20.8 195 226-437 67-300 (381)
496 smart00564 PQQ beta-propeller 70.0 12 0.00026 21.3 4.1 25 412-436 8-32 (33)
497 PF03088 Str_synth: Strictosid 69.6 41 0.00089 25.0 7.6 42 293-334 34-75 (89)
498 PF14761 HPS3_N: Hermansky-Pud 68.0 35 0.00076 30.0 8.0 64 361-425 21-92 (215)
499 PLN02153 epithiospecifier prot 67.7 1.2E+02 0.0026 29.2 17.8 104 285-389 137-287 (341)
500 PF01011 PQQ: PQQ enzyme repea 67.6 18 0.00039 21.7 4.6 27 329-355 2-28 (38)
No 1
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=1.3e-79 Score=557.51 Aligned_cols=431 Identities=54% Similarity=0.871 Sum_probs=337.1
Q ss_pred CCCcchhhHHHHHHHHhcCCcchhhcccccccCccCCCCCCCCCchhHHHHHHhhhhhhhhhhccCCCCcccCccccccc
Q 010754 3 SITSEELNYLVFRYLQESGLLHSAFVLGYEAGINKCNIDGNLVPPRALITFVQKGLQYLEMEANLSNSDVDMDEDFSFLQ 82 (502)
Q Consensus 3 ~lts~evn~li~rYlqE~g~~~sA~~~~~e~~~~~~~~~~~~ip~~aLv~l~qkgl~y~~~e~~~~~~~~~~~~~~~~~~ 82 (502)
|||||||||||||||||+||.||||+|++|++|+++++..+.|||||||+||||||||+|+|.++.+++...+++++++.
T Consensus 2 sitsdEvN~LV~RYLqE~G~~hsaftf~~Et~is~~n~~~~~vp~gaLi~ivQKGLqY~E~E~~~~~~~~v~d~~~e~~~ 81 (524)
T KOG0273|consen 2 SITSDEVNFLVWRYLQESGFSHSAFTFGIETGISQSNINGSLVPPGALISIVQKGLQYVEAEKHLNESGVVFDAPIESLS 81 (524)
T ss_pred cccHHHHHHHHHHHHHHcCcceeeEEeeecccccccCCCccccChHHHHHHHHhhhhhhheeeeeccCCccccccccccc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999888889999999
Q ss_pred cCcccchhhHHHHHHHHHHhhccCCCCCCccccccCccccccchhhHhHHHHHHHHHhhhhhhcccCCccccCCCCCCch
Q 010754 83 PMDLITKDVCELRQMVKEKKKNLNGDRDKENDVDRGHEIEHGRVKEKERLDREKERERDKERVENEKEPEKQHESHPDKE 162 (502)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (502)
+.++..+++.++++....++...+.... +. +..+.++. ....++.....++ ..+..
T Consensus 82 ~~d~v~~~~~ql~~~~~~e~~s~~~~~~----------------~~--~~~~~~~~----~s~s~~ag~~~~~--d~a~~ 137 (524)
T KOG0273|consen 82 LEDLVMEDVVQLRQQAFREKLSEEQFCA----------------QL--KIAQDKES----GSTSTPAGSISQR--DGAKT 137 (524)
T ss_pred hhhhccccccccchhhhhhhccccchhh----------------hh--hhhhhhcc----CCcCCCCCccccc--cchhh
Confidence 9999999888876432222111110000 00 00000000 0000000000000 00000
Q ss_pred hhhhhhhhccCCCccccccccccCCCCcccccCCCCceeeeCCCceEEeccCCCceEEEEEcCCCC-eEEEEeCCCcEEE
Q 010754 163 MLTVQEEKVNSKPEENGVLQGEKGPEPMDIATTSASESFEIPNSDVTILEGHTSEVCACAWSPAGS-LLASGSGDSTARI 241 (502)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~H~~~V~~~~~~p~~~-~l~sgs~dg~v~i 241 (502)
+.. ..+ .+.+..........++.+. +..+||+..++.+. |+.+|++++|+|-.. +|++|+.|.+.++
T Consensus 138 ~er----~~n--~eed~a~~I~~~~e~~~i~-----~~~~I~~~~~kvl~-~~~~V~~~~WnP~~~~llasg~~~s~ari 205 (524)
T KOG0273|consen 138 GER----TSN--GEEDKAMSIDVHTEPMEID-----GGVEIPSSKAKVLR-HESEVFICAWNPLRDGLLASGSGDSTARI 205 (524)
T ss_pred cch----hcc--cccCccccccccccceeec-----ccccccccceeecc-CCCceEEEecCchhhhhhhccCCccceee
Confidence 000 000 0000000001112222222 24568888888888 999999999999654 9999999999999
Q ss_pred EecCCCCccCCCCCCCceeEEEeeec---CccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCCceEEEecCccCCe
Q 010754 242 WTIADGTSNGGAQNGPLNVLVLKHVK---GRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPI 318 (502)
Q Consensus 242 w~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v 318 (502)
|++........ ....+++.. ......+..|++++|+.+|..||+|+.||.++||+..+.+..++..|++||
T Consensus 206 ~~l~e~~~~~~------~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~G~l~~tl~~HkgPI 279 (524)
T KOG0273|consen 206 WNLLENSNIGS------TQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLATGSEDGEARIWNKDGNLISTLGQHKGPI 279 (524)
T ss_pred eeehhhccccc------hhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEEeecCcEEEEEecCchhhhhhhccCCce
Confidence 99986221111 111223222 233445678999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCC
Q 010754 319 FSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQ 398 (502)
Q Consensus 319 ~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~ 398 (502)
.+++|+..|+||++++.|+++.+||..++.+.+.|..|..+..+|.|..+..|++++.|+.|++|.+....|+.++.+|.
T Consensus 280 ~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~ 359 (524)
T KOG0273|consen 280 FSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHH 359 (524)
T ss_pred EEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCcc--EEEEeecCceEEEE
Q 010754 399 GEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQ--LILARLIPYFLYWI 475 (502)
Q Consensus 399 ~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~--l~las~~~~~~iw~ 475 (502)
++|++|.|+|.|.+|+|||+|++++||++....+.+.+.+|+..|+.+.|+|+|....+++.. ++.++.+.++++|+
T Consensus 360 g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwd 438 (524)
T KOG0273|consen 360 GEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWD 438 (524)
T ss_pred CceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEE
Confidence 999999999999999999999999999999999999999999999999999999988777654 55566678899994
No 2
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=5.8e-44 Score=317.13 Aligned_cols=246 Identities=27% Similarity=0.484 Sum_probs=220.0
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
....+.||.++|.|++|+|+|..|++|+.|.++|+||+.+.... ....+|...|.|++|+|||
T Consensus 107 CssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~-----------------~t~KgH~~WVlcvawsPDg 169 (480)
T KOG0271|consen 107 CSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPL-----------------FTCKGHKNWVLCVAWSPDG 169 (480)
T ss_pred eccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcc-----------------eeecCCccEEEEEEECCCc
Confidence 44568899999999999999999999999999999999886532 2334678899999999999
Q ss_pred CEEEEEECCCeEEEEECC--CceEEEecCccCCeEEEEEec-----CCCEEEEEecCCeEEEEEcCCCceEEEEeeccCC
Q 010754 287 TLLATGSYDGQARIWSTN--GDLKCTLSKHKGPIFSLKWNK-----KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP 359 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~v~~l~~~~-----~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~ 359 (502)
+.||+|+.||.|++||.. +.....+.+|+..|++++|.| ..++|++++.||+|+|||+..+.++..+.+|..+
T Consensus 170 k~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~ 249 (480)
T KOG0271|consen 170 KKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTAS 249 (480)
T ss_pred chhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccc
Confidence 999999999999999965 345568899999999999976 5579999999999999999999999999999999
Q ss_pred eEEEEecCCCEEEEEeCCCeEEEEEcCCCcceE-----------------------------------------------
Q 010754 360 TLDVDWRNNVSFATSSTDNMIYVCKIGENRPIK----------------------------------------------- 392 (502)
Q Consensus 360 v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~----------------------------------------------- 392 (502)
|+++.|-.++.+++++.|++|++|+...+....
T Consensus 250 VTCvrwGG~gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~ 329 (480)
T KOG0271|consen 250 VTCVRWGGEGLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYE 329 (480)
T ss_pred eEEEEEcCCceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHH
Confidence 999999999999999999999999977653321
Q ss_pred --------------------------------EEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCC
Q 010754 393 --------------------------------TFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHS 440 (502)
Q Consensus 393 --------------------------------~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~ 440 (502)
.+.+|..-|+.+.||||++++|++|-|.+|++||.++|+.+.+|++|-
T Consensus 330 ~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv 409 (480)
T KOG0271|consen 330 AVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHV 409 (480)
T ss_pred HhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhcc
Confidence 233788889999999999999999999999999999999999999999
Q ss_pred CcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 441 KEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 441 ~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
.+|+.++||.|.+ .++.+|.|.++++|..
T Consensus 410 ~~VYqvawsaDsR-------LlVS~SkDsTLKvw~V 438 (480)
T KOG0271|consen 410 AAVYQVAWSADSR-------LLVSGSKDSTLKVWDV 438 (480)
T ss_pred ceeEEEEeccCcc-------EEEEcCCCceEEEEEe
Confidence 9999999999998 7788888999999953
No 3
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=3.2e-43 Score=316.41 Aligned_cols=263 Identities=25% Similarity=0.382 Sum_probs=237.3
Q ss_pred CcccccCCCCceeeeCC----CceEEeccCCCceEEEEEcCC--CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEE
Q 010754 189 PMDIATTSASESFEIPN----SDVTILEGHTSEVCACAWSPA--GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLV 262 (502)
Q Consensus 189 ~~~~~~~~~~~~~~~~~----~~~~~l~~H~~~V~~~~~~p~--~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~ 262 (502)
...+++++-++...++. +.+.+|+||++.|.++.|+|. +..||||+.||++++|++.+...
T Consensus 187 s~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~------------- 253 (459)
T KOG0272|consen 187 SKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETP------------- 253 (459)
T ss_pred CCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcc-------------
Confidence 34455655555555543 447899999999999999996 56899999999999999987543
Q ss_pred EeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEE
Q 010754 263 LKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIV 341 (502)
Q Consensus 263 ~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~ 341 (502)
.....+|...|..++|+|+|++|+++++|.+-++||++. .......+|...|.+++|+|+|..+++|+.|..-+|
T Consensus 254 ----l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~Rv 329 (459)
T KOG0272|consen 254 ----LQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRV 329 (459)
T ss_pred ----hhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhhe
Confidence 334456678899999999999999999999999999875 455567899999999999999999999999999999
Q ss_pred EEcCCCceEEEEeeccCCeEEEEecCCCE-EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcC-CCCEEEEEeCC
Q 010754 342 WDVKTEEWKQQFEFHSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-TGSLLASCSDD 419 (502)
Q Consensus 342 wd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp-~g~~las~s~d 419 (502)
||+++|+++..+.+|..+|.+|.|+|++. +++|+.|++++|||++..+.+.++.+|.+-|+.|+|+| .|.+|+|+|.|
T Consensus 330 WDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD 409 (459)
T KOG0272|consen 330 WDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYD 409 (459)
T ss_pred eecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcccC
Confidence 99999999999999999999999999876 89999999999999999999999999999999999999 78999999999
Q ss_pred CcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 420 VTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 420 g~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
++++||...++.+++.+.||.+.|.++..+|+|+ .+++++.|.++++|.
T Consensus 410 ~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~-------~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 410 NTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQ-------AIATSSFDRTIKLWR 458 (459)
T ss_pred cceeeecCCCcccchhhcCCccceEEEEeccCCc-------eEEEeccCceeeecc
Confidence 9999999999999999999999999999999998 788899999999994
No 4
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.8e-41 Score=301.30 Aligned_cols=272 Identities=28% Similarity=0.491 Sum_probs=232.1
Q ss_pred ccccccCCCCcccccCCCCceeeeCC----CceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCC
Q 010754 180 VLQGEKGPEPMDIATTSASESFEIPN----SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQN 255 (502)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~ 255 (502)
++...-+|....+++++.+...+++. .+..+.+||..-|.|++|+|||+.||+|+.||+|++||-.+++...
T Consensus 118 Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g---- 193 (480)
T KOG0271|consen 118 VLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIG---- 193 (480)
T ss_pred EEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCccc----
Confidence 34444566666788888888877753 4578899999999999999999999999999999999998887532
Q ss_pred CCceeEEEeeecCccccCCCCeEEEEECC-----CCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCE
Q 010754 256 GPLNVLVLKHVKGRTNEKSKDVTTLDWNG-----EGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDY 329 (502)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~v~~l~~s~-----~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~ 329 (502)
....+|.+.|++++|.| ..++||+++.||.|+|||+. +.++..+.+|+.+|+|++|--+ .+
T Consensus 194 ------------~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~-gl 260 (480)
T KOG0271|consen 194 ------------RALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGE-GL 260 (480)
T ss_pred ------------ccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCC-ce
Confidence 34457789999999975 57899999999999999987 5678899999999999999754 58
Q ss_pred EEEEecCCeEEEEEcCCCceEEEEee------------------------------------------------------
Q 010754 330 LLTGSCDKTAIVWDVKTEEWKQQFEF------------------------------------------------------ 355 (502)
Q Consensus 330 l~s~~~d~~i~~wd~~~~~~~~~~~~------------------------------------------------------ 355 (502)
|++|+.|++|++|+...|.+.+.+.+
T Consensus 261 iySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlV 340 (480)
T KOG0271|consen 261 IYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLV 340 (480)
T ss_pred EEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeE
Confidence 99999999999998766544333332
Q ss_pred -------------------------ccCCeEEEEecCCCE-EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCC
Q 010754 356 -------------------------HSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT 409 (502)
Q Consensus 356 -------------------------~~~~v~~v~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~ 409 (502)
|..-|..+.|+|+.+ +++++.|..|++|+.++|+.+.+|+||-+.|..++|+.|
T Consensus 341 SgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaD 420 (480)
T KOG0271|consen 341 SGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSAD 420 (480)
T ss_pred EecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEeccC
Confidence 334467778878765 778899999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 410 GSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 410 g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
.++|++||.|.++++|++++.++...+.+|...|+++.|+|||. .+..++.|..+++|.
T Consensus 421 sRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~-------rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 421 SRLLVSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQ-------RVASGGKDKVLRLWR 479 (480)
T ss_pred ccEEEEcCCCceEEEEEeeeeeecccCCCCCceEEEEEecCCCc-------eeecCCCceEEEeec
Confidence 99999999999999999999999999999999999999999999 666666777788884
No 5
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=2.1e-41 Score=304.72 Aligned_cols=240 Identities=25% Similarity=0.374 Sum_probs=221.0
Q ss_pred cCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC--CCEEE
Q 010754 213 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE--GTLLA 290 (502)
Q Consensus 213 ~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~--g~~l~ 290 (502)
|-+.+|..|.|+++++.|||||.+|.+++|+..+... ...+.+|...|.++.|+|. +..+|
T Consensus 173 gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~-----------------~~~l~gH~~~v~~~~fhP~~~~~~la 235 (459)
T KOG0272|consen 173 GDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNL-----------------LQTLRGHTSRVGAAVFHPVDSDLNLA 235 (459)
T ss_pred cCCCcceeeEeecCCCeEEEeecCCceeEeecCCcce-----------------eEEEeccccceeeEEEccCCCcccee
Confidence 5568899999999999999999999999999887642 2334567889999999996 67999
Q ss_pred EEECCCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCC
Q 010754 291 TGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV 369 (502)
Q Consensus 291 s~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~ 369 (502)
+|+.||++++|++++ ..+..+.+|...|..++|+|+|++|+|++.|.+.++||++++..+....+|...|.+++|.+++
T Consensus 236 t~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DG 315 (459)
T KOG0272|consen 236 TASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDG 315 (459)
T ss_pred eeccCCceeeeccCCCcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCC
Confidence 999999999999987 7788899999999999999999999999999999999999999998899999999999998876
Q ss_pred E-EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEE
Q 010754 370 S-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRW 448 (502)
Q Consensus 370 ~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~ 448 (502)
. +++|+.|..-+|||+++++++..+.+|..+|.+|.|+|+|..|||||.|++++|||++..+++..+.+|..-|+.|+|
T Consensus 316 SL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~ 395 (459)
T KOG0272|consen 316 SLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKY 395 (459)
T ss_pred ceeeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEe
Confidence 6 567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 449 SPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 449 sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
+|.+. ..|++|+.|+++++|.
T Consensus 396 ~p~~g------~fL~TasyD~t~kiWs 416 (459)
T KOG0272|consen 396 SPQEG------YFLVTASYDNTVKIWS 416 (459)
T ss_pred cccCC------eEEEEcccCcceeeec
Confidence 99332 3889999999999995
No 6
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=1.2e-36 Score=261.98 Aligned_cols=261 Identities=21% Similarity=0.377 Sum_probs=225.4
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCC-----------------------CceeEEE
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNG-----------------------PLNVLVL 263 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~-----------------------~~~~~~~ 263 (502)
..++|+||.+.|.++.|++|+++|+++|.||.+.|||.-+......+... ...++.+
T Consensus 47 ~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~l 126 (343)
T KOG0286|consen 47 TRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPL 126 (343)
T ss_pred eEEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEec
Confidence 34899999999999999999999999999999999998765432211100 0111111
Q ss_pred e--------eecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEec-CCCEEEEE
Q 010754 264 K--------HVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNK-KGDYLLTG 333 (502)
Q Consensus 264 ~--------~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~-~~~~l~s~ 333 (502)
. .......+|.+.+.|+.|-+| ..|++++.|.+..+||++ +.....+.+|.+.|.++.++| +++.+++|
T Consensus 127 s~~d~~g~~~v~r~l~gHtgylScC~f~dD-~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg 205 (343)
T KOG0286|consen 127 STRDAEGNVRVSRELAGHTGYLSCCRFLDD-NHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSG 205 (343)
T ss_pred ccccccccceeeeeecCccceeEEEEEcCC-CceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEec
Confidence 1 122335678899999999874 578899999999999987 577889999999999999999 99999999
Q ss_pred ecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCC-EEEEEeCCCeEEEEEcCCCcceEEEecC--CCcEEEEEEcCCC
Q 010754 334 SCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFAGH--QGEVNCVKWDPTG 410 (502)
Q Consensus 334 ~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~h--~~~i~~l~~sp~g 410 (502)
+.|+..++||++.+.+++.|.+|...|.++.|.|++ .|++|+.|++.++||++..+.+..|... ..+|++++||..|
T Consensus 206 ~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SG 285 (343)
T KOG0286|consen 206 GCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSG 285 (343)
T ss_pred ccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccc
Confidence 999999999999999999999999999999998765 4999999999999999999998888732 3579999999999
Q ss_pred CEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 411 SLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 411 ~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
++|++|..|.++.+||.-.++.+..+.+|...|.++..+|||. .+.++|-|.+++||.
T Consensus 286 RlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~-------av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 286 RLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGM-------AVATGSWDSTLRIWA 343 (343)
T ss_pred cEEEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCCCc-------EEEecchhHheeecC
Confidence 9999999999999999999999999999999999999999999 677888889999993
No 7
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=1.2e-37 Score=301.63 Aligned_cols=269 Identities=23% Similarity=0.384 Sum_probs=229.6
Q ss_pred CCCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCC---c---------eeEE--EeeecCc
Q 010754 204 PNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGP---L---------NVLV--LKHVKGR 269 (502)
Q Consensus 204 ~~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~---~---------~~~~--~~~~~~~ 269 (502)
|.-...++..-...++|+.|++++++||.|-.|..|++|.+...+...-..... + .... -......
T Consensus 367 pSic~YT~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~ 446 (707)
T KOG0263|consen 367 PSICMYTFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRT 446 (707)
T ss_pred CcEEEEEEEEcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEE
Confidence 333444555555779999999999999999999999999998543111000000 0 0000 0011223
Q ss_pred cccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCc
Q 010754 270 TNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE 348 (502)
Q Consensus 270 ~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~ 348 (502)
..+|.++|....|+|+.++|++++.|++||+|++.. .....+.+|..||+.+.|+|.|-||+|++.|++.++|......
T Consensus 447 L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~ 526 (707)
T KOG0263|consen 447 LYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNK 526 (707)
T ss_pred eecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCC
Confidence 568899999999999999999999999999999875 5667888999999999999999999999999999999999999
Q ss_pred eEEEEeeccCCeEEEEecCCC-EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 010754 349 WKQQFEFHSGPTLDVDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNM 427 (502)
Q Consensus 349 ~~~~~~~~~~~v~~v~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~ 427 (502)
+++.|.+|.+.|.++.|+|+. .+++|+.|.++++||+.++..++.|.||.++|++++|||+|++|++|+.||.|+|||+
T Consensus 527 PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl 606 (707)
T KOG0263|consen 527 PLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDL 606 (707)
T ss_pred chhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEc
Confidence 999999999999999998875 5889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEeeeE
Q 010754 428 KQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICSIY 479 (502)
Q Consensus 428 ~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~~ 479 (502)
.+++++..+.+|++.|++|.||.+|. .|+.+++|.++++|+....
T Consensus 607 ~~~~~v~~l~~Ht~ti~SlsFS~dg~-------vLasgg~DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 607 ANGSLVKQLKGHTGTIYSLSFSRDGN-------VLASGGADNSVRLWDLTKV 651 (707)
T ss_pred CCCcchhhhhcccCceeEEEEecCCC-------EEEecCCCCeEEEEEchhh
Confidence 99999999999999999999999998 7788888899999975443
No 8
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-36 Score=260.09 Aligned_cols=246 Identities=23% Similarity=0.396 Sum_probs=217.1
Q ss_pred CceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC
Q 010754 206 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 206 ~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~ 285 (502)
..++.|+||...|..++.+++|++.++++.|+++++||+.+++. ...+.+|...|.+++|++|
T Consensus 54 ~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~-----------------t~~f~GH~~dVlsva~s~d 116 (315)
T KOG0279|consen 54 VPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGES-----------------TRRFVGHTKDVLSVAFSTD 116 (315)
T ss_pred ceeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCcE-----------------EEEEEecCCceEEEEecCC
Confidence 35788999999999999999999999999999999999998752 2234567889999999999
Q ss_pred CCEEEEEECCCeEEEEECCCceEEEecCc--cCCeEEEEEecC--CCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeE
Q 010754 286 GTLLATGSYDGQARIWSTNGDLKCTLSKH--KGPIFSLKWNKK--GDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL 361 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~v~~l~~~~~--~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~ 361 (502)
.+.+++|+.|.+|++|++-+.+..+...+ +.-|.|++|+|+ ..+|++++.|++|++||+++.+....+.+|.+.++
T Consensus 117 n~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~ 196 (315)
T KOG0279|consen 117 NRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVN 196 (315)
T ss_pred CceeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEE
Confidence 99999999999999999999888877665 788999999998 68999999999999999999999999999999999
Q ss_pred EEEecCCCE-EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEecc--
Q 010754 362 DVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE-- 438 (502)
Q Consensus 362 ~v~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~-- 438 (502)
.+.++|++. .++|+.||.+.+||++.++.+..+. |...|.+++|+|+...|+.+... .|+|||+.++.++..++.
T Consensus 197 t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~-a~~~v~sl~fspnrywL~~at~~-sIkIwdl~~~~~v~~l~~d~ 274 (315)
T KOG0279|consen 197 TVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLE-AFDIVNSLCFSPNRYWLCAATAT-SIKIWDLESKAVVEELKLDG 274 (315)
T ss_pred EEEECCCCCEEecCCCCceEEEEEccCCceeEecc-CCCeEeeEEecCCceeEeeccCC-ceEEEeccchhhhhhccccc
Confidence 999998776 5678899999999999999988886 88999999999998777776655 599999999998877652
Q ss_pred --C-----CCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 439 --H-----SKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 439 --h-----~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
. .-...+++|++||+ .|+.+-.|+.+++|...
T Consensus 275 ~g~s~~~~~~~clslaws~dG~-------tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 275 IGPSSKAGDPICLSLAWSADGQ-------TLFAGYTDNVIRVWQVA 313 (315)
T ss_pred cccccccCCcEEEEEEEcCCCc-------EEEeeecCCcEEEEEee
Confidence 2 22368899999999 88899999999999653
No 9
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=100.00 E-value=1.4e-37 Score=284.73 Aligned_cols=256 Identities=25% Similarity=0.449 Sum_probs=225.1
Q ss_pred CceeeeCCCceEEeccCCCceEEEEEcC-CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCC
Q 010754 198 SESFEIPNSDVTILEGHTSEVCACAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKD 276 (502)
Q Consensus 198 ~~~~~~~~~~~~~l~~H~~~V~~~~~~p-~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (502)
...+.+|.+.++++.||+..|.++.|.| .+.+|++|+.|+.|+||++.+.. .+...+.+|..+
T Consensus 197 ~~rc~~Pkk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~----------------~~lrtf~gH~k~ 260 (503)
T KOG0282|consen 197 EERCYLPKKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDR----------------RCLRTFKGHRKP 260 (503)
T ss_pred cceeeccHhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCc----------------ceehhhhcchhh
Confidence 4567789999999999999999999999 79999999999999999987632 244556678899
Q ss_pred eEEEEECCCCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCC-CEEEEEecCCeEEEEEcCCCceEEEEee
Q 010754 277 VTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQQFEF 355 (502)
Q Consensus 277 v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 355 (502)
|.+++|+.+|..++++++|+.|++||++.+.+.........++|++|+|++ +.|++|+.|+.|+.||+++++.++.+..
T Consensus 261 Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~ 340 (503)
T KOG0282|consen 261 VRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDR 340 (503)
T ss_pred hhhhhccccCCeeeeeecceeeeeeccccceEEEEEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHh
Confidence 999999999999999999999999999876665555566788999999998 8999999999999999999999999999
Q ss_pred ccCCeEEEEecCC-CEEEEEeCCCeEEEEEcCCCcce-------------------------------------------
Q 010754 356 HSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENRPI------------------------------------------- 391 (502)
Q Consensus 356 ~~~~v~~v~~~~~-~~~~~~~~d~~i~i~d~~~~~~~------------------------------------------- 391 (502)
|-+.|.++.|.++ .+|++.+.|+.++||+.+...++
T Consensus 341 hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~ 420 (503)
T KOG0282|consen 341 HLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRL 420 (503)
T ss_pred hhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEeccccccc
Confidence 9999999999665 56999999999999998865433
Q ss_pred ---EEEecCC--CcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEe
Q 010754 392 ---KTFAGHQ--GEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILAR 466 (502)
Q Consensus 392 ---~~~~~h~--~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las 466 (502)
+.|.||. +.-..+.|||||.+|++|+.||.+.+||.++-+.+..+++|+++|..+.|+|..+ ..+++++
T Consensus 421 nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~------Skvat~~ 494 (503)
T KOG0282|consen 421 NKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEP------SKVATCG 494 (503)
T ss_pred CHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhccccCCcceEEEEecCCCc------ceeEecc
Confidence 2234553 4566799999999999999999999999999999999999999999999999876 4678888
Q ss_pred ecCceEEEE
Q 010754 467 LIPYFLYWI 475 (502)
Q Consensus 467 ~~~~~~iw~ 475 (502)
.+|.|++|.
T Consensus 495 w~G~Ikiwd 503 (503)
T KOG0282|consen 495 WDGLIKIWD 503 (503)
T ss_pred cCceeEecC
Confidence 999999994
No 10
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-36 Score=257.08 Aligned_cols=247 Identities=24% Similarity=0.339 Sum_probs=214.8
Q ss_pred eEEeccCCCceEEEEEcCC-CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 208 VTILEGHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~-~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
.-+|++|++.|+.++..+. ...|++++.|.++.+|++..... ........+.+|+..|..+..+++|
T Consensus 8 ~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~------------~~G~~~r~~~GHsH~v~dv~~s~dg 75 (315)
T KOG0279|consen 8 RGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDI------------KYGVPVRRLTGHSHFVSDVVLSSDG 75 (315)
T ss_pred eeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCcc------------ccCceeeeeeccceEecceEEccCC
Confidence 3578999999999999996 67999999999999999987532 1112334456688999999999999
Q ss_pred CEEEEEECCCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeec--cCCeEEE
Q 010754 287 TLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH--SGPTLDV 363 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~--~~~v~~v 363 (502)
++.++++.|+.+++||+.+ ...+.+.+|...|.+++|+++.+.+++|+.|++|++|++... +..++... ...|.++
T Consensus 76 ~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~-ck~t~~~~~~~~WVscv 154 (315)
T KOG0279|consen 76 NFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGV-CKYTIHEDSHREWVSCV 154 (315)
T ss_pred ceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeeccc-EEEEEecCCCcCcEEEE
Confidence 9999999999999999875 778899999999999999999999999999999999998654 44444433 6789999
Q ss_pred EecCCC---EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCC
Q 010754 364 DWRNNV---SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHS 440 (502)
Q Consensus 364 ~~~~~~---~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~ 440 (502)
.|+|+. .+++++.|++|++||+++-+....+.||.+.++.+++||||.+.++|+.||.+.+||++.++.+..+. |.
T Consensus 155 rfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~-a~ 233 (315)
T KOG0279|consen 155 RFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLE-AF 233 (315)
T ss_pred EEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEecc-CC
Confidence 998874 58999999999999999999999999999999999999999999999999999999999999988775 88
Q ss_pred CcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 441 KEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 441 ~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
..|.+++|+|+.. .+.+.....++||+.
T Consensus 234 ~~v~sl~fspnry--------wL~~at~~sIkIwdl 261 (315)
T KOG0279|consen 234 DIVNSLCFSPNRY--------WLCAATATSIKIWDL 261 (315)
T ss_pred CeEeeEEecCCce--------eEeeccCCceEEEec
Confidence 8999999999975 455555566999974
No 11
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=1.5e-34 Score=263.96 Aligned_cols=235 Identities=27% Similarity=0.485 Sum_probs=208.0
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECC
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 295 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~d 295 (502)
..|++++|+.+|.+||+|+.||.++||+..... ...+..|.++|.++.|+..|++|++++.|
T Consensus 236 kdVT~L~Wn~~G~~LatG~~~G~~riw~~~G~l------------------~~tl~~HkgPI~slKWnk~G~yilS~~vD 297 (524)
T KOG0273|consen 236 KDVTSLDWNNDGTLLATGSEDGEARIWNKDGNL------------------ISTLGQHKGPIFSLKWNKKGTYILSGGVD 297 (524)
T ss_pred CCcceEEecCCCCeEEEeecCcEEEEEecCchh------------------hhhhhccCCceEEEEEcCCCCEEEeccCC
Confidence 679999999999999999999999999976542 23345578899999999999999999999
Q ss_pred CeEEEEECCCc------------------------------------------eEEEecCccCCeEEEEEecCCCEEEEE
Q 010754 296 GQARIWSTNGD------------------------------------------LKCTLSKHKGPIFSLKWNKKGDYLLTG 333 (502)
Q Consensus 296 g~i~iwd~~~~------------------------------------------~~~~~~~~~~~v~~l~~~~~~~~l~s~ 333 (502)
|++.+||.... .+.++.+|.++|.+|+|+|.|..|+++
T Consensus 298 ~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~ 377 (524)
T KOG0273|consen 298 GTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASC 377 (524)
T ss_pred ccEEEEeccCceEEEeeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEe
Confidence 99999985211 233556799999999999999999999
Q ss_pred ecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCC----------CEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEE
Q 010754 334 SCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN----------VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNC 403 (502)
Q Consensus 334 ~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~----------~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~ 403 (502)
+.|++++||.+........+..|...|..+.|+|. ..+++++.|++|++||+..+.++.+|..|..+|.+
T Consensus 378 SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVys 457 (524)
T KOG0273|consen 378 SDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYS 457 (524)
T ss_pred cCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEE
Confidence 99999999999999999999999999999999873 34899999999999999999999999999999999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 404 VKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 404 l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
++|+|+|+++|+|+.||.|.||++++++.++.+.+ ++.|..++|+-+|. ++..+-+++.+++-++
T Consensus 458 vafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~-~~~Ifel~Wn~~G~-------kl~~~~sd~~vcvldl 522 (524)
T KOG0273|consen 458 VAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQG-TGGIFELCWNAAGD-------KLGACASDGSVCVLDL 522 (524)
T ss_pred EEecCCCcEEEecCCCCeeEeccccchheeEeecC-CCeEEEEEEcCCCC-------EEEEEecCCCceEEEe
Confidence 99999999999999999999999999999999885 44599999999998 6666666777776543
No 12
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=2.9e-36 Score=270.41 Aligned_cols=250 Identities=23% Similarity=0.417 Sum_probs=224.3
Q ss_pred CCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEEC
Q 010754 215 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY 294 (502)
Q Consensus 215 ~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~ 294 (502)
+.+|..+.|.|+|+.|++|+..|...+|+...- .+......|...|+++.|+++|.++++|+.
T Consensus 96 kc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~f-----------------nFEtilQaHDs~Vr~m~ws~~g~wmiSgD~ 158 (464)
T KOG0284|consen 96 KCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSF-----------------NFETILQAHDSPVRTMKWSHNGTWMISGDK 158 (464)
T ss_pred ccceeeEEEcCCCceeEeecccccEEEecCcee-----------------eHHHHhhhhcccceeEEEccCCCEEEEcCC
Confidence 467999999999999999999999999997432 133445678899999999999999999999
Q ss_pred CCeEEEEECCCceEEEecCcc-CCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCC-CEEE
Q 010754 295 DGQARIWSTNGDLKCTLSKHK-GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN-VSFA 372 (502)
Q Consensus 295 dg~i~iwd~~~~~~~~~~~~~-~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~-~~~~ 372 (502)
+|.|++|+.+-..+..+..|. ..|.+++|+|+...|++|+.||+|+|||....+....+.+|.-.|.+++|+|. +.++
T Consensus 159 gG~iKyWqpnmnnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLia 238 (464)
T KOG0284|consen 159 GGMIKYWQPNMNNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIA 238 (464)
T ss_pred CceEEecccchhhhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeE
Confidence 999999998866666666655 89999999999999999999999999999999888889999999999999885 5688
Q ss_pred EEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCC
Q 010754 373 TSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTG 452 (502)
Q Consensus 373 ~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g 452 (502)
+++.|..|++||.+++.++.++.+|...|..+.|+|++++|+++|.|..++++|+++.+.+.++++|...|+++.|+|--
T Consensus 239 sgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~ 318 (464)
T KOG0284|consen 239 SGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLN 318 (464)
T ss_pred EccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeecccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCCCccEEEEeecCceEEE------------------EeeeEEEeeeccc
Q 010754 453 SGTNNPNQQLILARLIPYFLYW------------------ICSIYFKYFGTTE 487 (502)
Q Consensus 453 ~~~~~~~~~l~las~~~~~~iw------------------~~~~~~~~~g~~~ 487 (502)
. ..+.+++.|+.+.+| +|++.+.|.|++.
T Consensus 319 ~------~lftsgg~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil 365 (464)
T KOG0284|consen 319 E------SLFTSGGSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHIL 365 (464)
T ss_pred c------cceeeccCCCceEEEeccccccccCCCcccccceeeeeccccceeE
Confidence 5 356778888999999 4667777777664
No 13
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=2.8e-35 Score=259.81 Aligned_cols=259 Identities=22% Similarity=0.363 Sum_probs=234.3
Q ss_pred ceeeeCCCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeE
Q 010754 199 ESFEIPNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVT 278 (502)
Q Consensus 199 ~~~~~~~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 278 (502)
..|..|.+..+++.||.+.|.|+++.|...+|++|+.|++++|||+.++++ .....+|...|.
T Consensus 135 PeWHapwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~L-----------------kltltGhi~~vr 197 (460)
T KOG0285|consen 135 PEWHAPWKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQL-----------------KLTLTGHIETVR 197 (460)
T ss_pred ccccCcceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeE-----------------EEeecchhheee
Confidence 445667777899999999999999999999999999999999999999873 233445677899
Q ss_pred EEEECCCCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeecc
Q 010754 279 TLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS 357 (502)
Q Consensus 279 ~l~~s~~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~ 357 (502)
.+++|+--.|+++++.|+.|+.||++ .+.+..+.+|-+.|+|++.+|.-..|++|+.|.++++||+++...+..+.+|.
T Consensus 198 ~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~ 277 (460)
T KOG0285|consen 198 GVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHT 277 (460)
T ss_pred eeeecccCceEEEecCCCeeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCC
Confidence 99999999999999999999999987 56778899999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEecC-CCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q 010754 358 GPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDL 436 (502)
Q Consensus 358 ~~v~~v~~~~-~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~ 436 (502)
.+|..+.+.+ +..+++|+.|++|++||++.++...++..|...|.+++.+|....+||+|.|. |+-|++..+..+..+
T Consensus 278 ~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~dn-ik~w~~p~g~f~~nl 356 (460)
T KOG0285|consen 278 NPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPDN-IKQWKLPEGEFLQNL 356 (460)
T ss_pred CcceeEEeecCCCceEEecCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCcc-ceeccCCccchhhcc
Confidence 9999999965 67899999999999999999999999999999999999999999999999985 999999999999999
Q ss_pred ccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEeeeEEEee
Q 010754 437 REHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICSIYFKYF 483 (502)
Q Consensus 437 ~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~~~~~~ 483 (502)
.+|+.-|.+++-..||- ++.|+..+.+.+|+|.-.+++.
T Consensus 357 sgh~~iintl~~nsD~v--------~~~G~dng~~~fwdwksg~nyQ 395 (460)
T KOG0285|consen 357 SGHNAIINTLSVNSDGV--------LVSGGDNGSIMFWDWKSGHNYQ 395 (460)
T ss_pred ccccceeeeeeeccCce--------EEEcCCceEEEEEecCcCcccc
Confidence 99999999999999985 4555555889999987766553
No 14
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=2.9e-35 Score=285.04 Aligned_cols=208 Identities=25% Similarity=0.465 Sum_probs=192.3
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
..+.|.||.++|+.+.|+|+.++|+++|.|+++|+|.+.+..+. ....+|..+|.++.|+|.|
T Consensus 443 ~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~-----------------V~y~GH~~PVwdV~F~P~G 505 (707)
T KOG0263|consen 443 TSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCL-----------------VIYKGHLAPVWDVQFAPRG 505 (707)
T ss_pred eeEEeecCCCceeeeeecccccceeeccCCcceeeeecccceeE-----------------EEecCCCcceeeEEecCCc
Confidence 35679999999999999999999999999999999999886532 2234778899999999999
Q ss_pred CEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEe
Q 010754 287 TLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW 365 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~ 365 (502)
-++|+|+.|++.++|..+ ....+.+.+|-+.|.|+.|+|+.+|+++||.|.+|++||+.+|..++.|.+|.++|.+++|
T Consensus 506 yYFatas~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~ 585 (707)
T KOG0263|consen 506 YYFATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAF 585 (707)
T ss_pred eEEEecCCCceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEE
Confidence 999999999999999976 5677889999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCE-EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCe
Q 010754 366 RNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDK 431 (502)
Q Consensus 366 ~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~ 431 (502)
+|.++ +++|+.||.|.+||+.++.++..+.+|++.|.++.|+.+|..||+|+.|.+|++||+..-.
T Consensus 586 Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~ 652 (707)
T KOG0263|consen 586 SPCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVI 652 (707)
T ss_pred cCCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhhc
Confidence 98765 7889999999999999999999999999999999999999999999999999999986533
No 15
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.7e-34 Score=255.71 Aligned_cols=248 Identities=22% Similarity=0.383 Sum_probs=227.1
Q ss_pred CceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC
Q 010754 206 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 206 ~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~ 285 (502)
...+.|+||++.|..++|+..|++||+++.|-.+++||+.+.. .......+|...|.++.|-|.
T Consensus 141 ~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~----------------~c~ks~~gh~h~vS~V~f~P~ 204 (406)
T KOG0295|consen 141 ELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTFF----------------RCIKSLIGHEHGVSSVFFLPL 204 (406)
T ss_pred hhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHHHH----------------HHHHHhcCcccceeeEEEEec
Confidence 3467899999999999999999999999999999999987631 122233456778999999999
Q ss_pred CCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEE
Q 010754 286 GTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD 364 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~ 364 (502)
|.+|++++.|.+|+.|+.. +-++.++.+|..-|..++.+.||..+++++.|.+|++|-+.++++...+..|.-+|-+++
T Consensus 205 gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~ 284 (406)
T KOG0295|consen 205 GDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIA 284 (406)
T ss_pred CCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEE
Confidence 9999999999999999987 578889999999999999999999999999999999999999999999999999999999
Q ss_pred ecCC----------------CEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 010754 365 WRNN----------------VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK 428 (502)
Q Consensus 365 ~~~~----------------~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~ 428 (502)
|.|. ..+.+++.|++|++||+.++.++.++.+|...|..++|+|.|+||+|+.+|+++++||++
T Consensus 285 wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~ 364 (406)
T KOG0295|consen 285 WAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLK 364 (406)
T ss_pred ecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEec
Confidence 9642 257888999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 429 QDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 429 ~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
+++|.+.+.+|..-++++.|+.+-. ++++|+.+..+++|-+
T Consensus 365 ~~~cmk~~~ah~hfvt~lDfh~~~p-------~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 365 NLQCMKTLEAHEHFVTSLDFHKTAP-------YVVTGSVDQTVKVWEC 405 (406)
T ss_pred cceeeeccCCCcceeEEEecCCCCc-------eEEeccccceeeeeec
Confidence 9999999999999999999999987 8899999999999965
No 16
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=5.8e-34 Score=239.96 Aligned_cols=266 Identities=20% Similarity=0.309 Sum_probs=226.4
Q ss_pred cccccCCCCceeeeCC----CceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEee
Q 010754 190 MDIATTSASESFEIPN----SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKH 265 (502)
Q Consensus 190 ~~~~~~~~~~~~~~~~----~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~ 265 (502)
..+++.+-+..++++. ...++++...+.|..+...|+++.||+++. -.||+||+.++...
T Consensus 11 viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~--------------- 74 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPN--------------- 74 (311)
T ss_pred eEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCC---------------
Confidence 3455666666666643 446777777889999999999999999976 68999999987531
Q ss_pred ecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcC
Q 010754 266 VKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK 345 (502)
Q Consensus 266 ~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~ 345 (502)
+...+.+|.+.|+++.|..+|+.+++|+.||+++|||++.........|.++|+++..+|+...|++|..+|.|++||+.
T Consensus 75 Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~ 154 (311)
T KOG0315|consen 75 PVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLG 154 (311)
T ss_pred ceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEcc
Confidence 22334566788999999999999999999999999999987777777899999999999999999999999999999999
Q ss_pred CCceEEEEee-ccCCeEEEEecCCCE-EEEEeCCCeEEEEEcCCC------cceEEEecCCCcEEEEEEcCCCCEEEEEe
Q 010754 346 TEEWKQQFEF-HSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGEN------RPIKTFAGHQGEVNCVKWDPTGSLLASCS 417 (502)
Q Consensus 346 ~~~~~~~~~~-~~~~v~~v~~~~~~~-~~~~~~d~~i~i~d~~~~------~~~~~~~~h~~~i~~l~~sp~g~~las~s 417 (502)
...+...+.. ...++.++...+++. ++.+...|..++|++-.. .|+.+|+.|.+.|..+.+||++++||++|
T Consensus 155 ~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~s 234 (311)
T KOG0315|consen 155 ENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCS 234 (311)
T ss_pred CCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeec
Confidence 8876665543 345688888866554 667778899999998764 46788999999999999999999999999
Q ss_pred CCCcEEEEECCCC-eeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEeee
Q 010754 418 DDVTAKIWNMKQD-KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICSI 478 (502)
Q Consensus 418 ~dg~i~iwd~~~~-~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~ 478 (502)
.|.+++||+..+. +....+.+|...++..+||.||. +|++|+.|+..++|....
T Consensus 235 sdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~-------YlvTassd~~~rlW~~~~ 289 (311)
T KOG0315|consen 235 SDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGE-------YLVTASSDHTARLWDLSA 289 (311)
T ss_pred CCceEEEEecCCceeeEEEeecCCceEEeeeeccCcc-------EEEecCCCCceeeccccc
Confidence 9999999999988 67778889999999999999999 999999999999998654
No 17
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=3.3e-35 Score=263.69 Aligned_cols=268 Identities=24% Similarity=0.394 Sum_probs=231.5
Q ss_pred ccCCCCcccccCCCCceeeeCCCce----EEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCce
Q 010754 184 EKGPEPMDIATTSASESFEIPNSDV----TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLN 259 (502)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~ 259 (502)
...|+...+.+++..+.+.+++... .+++.|..+|.++.|+++|.+++||..+|.|++|+..-..
T Consensus 103 ~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnn----------- 171 (464)
T KOG0284|consen 103 RWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNN----------- 171 (464)
T ss_pred EEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhh-----------
Confidence 3455656677778888888887654 3567999999999999999999999999999999965321
Q ss_pred eEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCe
Q 010754 260 VLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKT 338 (502)
Q Consensus 260 ~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~ 338 (502)
.......|...|++++|+|+...+++|+.||+|+|||.. .+....+.+|.-.|.++.|+|....|++++.|..
T Consensus 172 ------Vk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnl 245 (464)
T KOG0284|consen 172 ------VKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNL 245 (464)
T ss_pred ------hHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCce
Confidence 111222345789999999999999999999999999965 5566677999999999999999999999999999
Q ss_pred EEEEEcCCCceEEEEeeccCCeEEEEecCC-CEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCC-CCEEEEE
Q 010754 339 AIVWDVKTEEWKQQFEFHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT-GSLLASC 416 (502)
Q Consensus 339 i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~-g~~las~ 416 (502)
|++||.+++.++.++..|+..|+.+.|.++ +.|++++.|..++++|+++.+.+.++++|...|+++.|+|- ..+|.+|
T Consensus 246 VKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsg 325 (464)
T KOG0284|consen 246 VKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSG 325 (464)
T ss_pred eEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeec
Confidence 999999999999999999999999999764 66899999999999999999999999999999999999994 5688999
Q ss_pred eCCCcEEEEECCCCeeEEEec-cCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 417 SDDVTAKIWNMKQDKYVHDLR-EHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 417 s~dg~i~iwd~~~~~~~~~~~-~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
+.||.|..|.+...+++..+. +|...|++++|+|-|- .|.+|+.|.++++|.
T Consensus 326 g~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGh-------il~tgsnd~t~rfw~ 378 (464)
T KOG0284|consen 326 GSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGH-------ILATGSNDRTVRFWT 378 (464)
T ss_pred cCCCceEEEeccccccccCCCcccccceeeeeccccce-------eEeecCCCcceeeec
Confidence 999999999998777766665 8999999999999998 555566678899995
No 18
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1e-33 Score=250.75 Aligned_cols=248 Identities=25% Similarity=0.371 Sum_probs=226.0
Q ss_pred CceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC
Q 010754 206 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 206 ~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~ 285 (502)
.....+.||..+|+.+-|+|+-.++++++.|++|++||..++++. ....+|...|.+++|+..
T Consensus 99 ~l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e-----------------~~LrGHt~sv~di~~~a~ 161 (406)
T KOG0295|consen 99 NLVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELE-----------------RSLRGHTDSVFDISFDAS 161 (406)
T ss_pred CchhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhh-----------------hhhhccccceeEEEEecC
Confidence 456778899999999999999999999999999999999998743 334556778999999999
Q ss_pred CCEEEEEECCCeEEEEECCC--ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEE
Q 010754 286 GTLLATGSYDGQARIWSTNG--DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDV 363 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v 363 (502)
|+++++++.|-.+++||... .++..+.+|...|.+++|-|.|.++++++.|.+|+.|++.++-++.+|.+|...|..+
T Consensus 162 Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v 241 (406)
T KOG0295|consen 162 GKYLATCSSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMV 241 (406)
T ss_pred ccEEEecCCccchhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEEE
Confidence 99999999999999999875 5667788999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCE-EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCC---------------CCEEEEEeCCCcEEEEEC
Q 010754 364 DWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT---------------GSLLASCSDDVTAKIWNM 427 (502)
Q Consensus 364 ~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~---------------g~~las~s~dg~i~iwd~ 427 (502)
....++. +++++.|.++++|-+.++++...++.|+.+|-+++|.|. +.++.+++.|++|++||+
T Consensus 242 ~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv 321 (406)
T KOG0295|consen 242 RVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDV 321 (406)
T ss_pred EecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEec
Confidence 9866554 788899999999999999999999999999999999872 369999999999999999
Q ss_pred CCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 428 KQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 428 ~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
.++.|+.++.+|...|..++|+|-|. +|+.+..|+++++|+..
T Consensus 322 ~tg~cL~tL~ghdnwVr~~af~p~Gk-------yi~ScaDDktlrvwdl~ 364 (406)
T KOG0295|consen 322 STGMCLFTLVGHDNWVRGVAFSPGGK-------YILSCADDKTLRVWDLK 364 (406)
T ss_pred cCCeEEEEEecccceeeeeEEcCCCe-------EEEEEecCCcEEEEEec
Confidence 99999999999999999999999998 88888888999999753
No 19
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=3.3e-32 Score=232.26 Aligned_cols=243 Identities=30% Similarity=0.536 Sum_probs=205.2
Q ss_pred ceEEeccCCCceEEEEEcCC-CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC
Q 010754 207 DVTILEGHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~-~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~ 285 (502)
.++.++||++.|..++|+|- |.+||||+.|..|+||+...+.. ...++.. ..+|...|.+++|+|.
T Consensus 6 ~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s-----------~~ck~vl--d~~hkrsVRsvAwsp~ 72 (312)
T KOG0645|consen 6 LEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDS-----------WTCKTVL--DDGHKRSVRSVAWSPH 72 (312)
T ss_pred eEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCc-----------EEEEEec--cccchheeeeeeecCC
Confidence 46789999999999999997 89999999999999999875321 1222222 2367889999999999
Q ss_pred CCEEEEEECCCeEEEEECCC---ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC---ceEEEEeeccCC
Q 010754 286 GTLLATGSYDGQARIWSTNG---DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE---EWKQQFEFHSGP 359 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~---~~~~~~~~~~~~ 359 (502)
|++|++|++|.++.||.-.. .++.++.+|...|.+++|+++|++|++|+.|++|-||.+..+ .+...+..|...
T Consensus 73 g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqD 152 (312)
T KOG0645|consen 73 GRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQD 152 (312)
T ss_pred CcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeecccccc
Confidence 99999999999999997542 567789999999999999999999999999999999998643 467788899999
Q ss_pred eEEEEecC-CCEEEEEeCCCeEEEEEcCC---CcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEE
Q 010754 360 TLDVDWRN-NVSFATSSTDNMIYVCKIGE---NRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD 435 (502)
Q Consensus 360 v~~v~~~~-~~~~~~~~~d~~i~i~d~~~---~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~ 435 (502)
|-.+.|+| ...|++++-|++|++|+-.. -.++.++.+|...|.+++|+|.|..|++|++|++|+||...+ .
T Consensus 153 VK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~-----~ 227 (312)
T KOG0645|consen 153 VKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYT-----D 227 (312)
T ss_pred ccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeecc-----C
Confidence 99999988 46789999999999998763 357899999999999999999999999999999999998652 2
Q ss_pred ec-cCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 436 LR-EHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 436 ~~-~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
+. .|+.+++.++|. +|. |.++++|+.++++.-
T Consensus 228 ~~~~~sr~~Y~v~W~-~~~--------IaS~ggD~~i~lf~~ 260 (312)
T KOG0645|consen 228 LSGMHSRALYDVPWD-NGV--------IASGGGDDAIRLFKE 260 (312)
T ss_pred cchhcccceEeeeec-ccc--------eEeccCCCEEEEEEe
Confidence 22 488899999999 663 566666677777643
No 20
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=3.3e-33 Score=268.10 Aligned_cols=256 Identities=24% Similarity=0.373 Sum_probs=225.7
Q ss_pred eeeeCCCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEE
Q 010754 200 SFEIPNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTT 279 (502)
Q Consensus 200 ~~~~~~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 279 (502)
.+..+......+.||+..|.++....+|-+|+|||.|.++++|.++++... ..+.....+|...|.+
T Consensus 350 ~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~-------------~~~~a~~~gH~~svga 416 (775)
T KOG0319|consen 350 LYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSK-------------SLCVAQANGHTNSVGA 416 (775)
T ss_pred EEecCCCceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcch-------------hhhhhhhcccccccce
Confidence 344566667799999999999996667889999999999999999554321 1233455678899999
Q ss_pred EEECCCC-CEEEEEECCCeEEEEECCCc------eE----EEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCc
Q 010754 280 LDWNGEG-TLLATGSYDGQARIWSTNGD------LK----CTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE 348 (502)
Q Consensus 280 l~~s~~g-~~l~s~~~dg~i~iwd~~~~------~~----~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~ 348 (502)
++++..+ .+|++++.|+++++|++... .. .....|...|++++++|+.+.|+|||.|++.+||++....
T Consensus 417 va~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~ 496 (775)
T KOG0319|consen 417 VAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLR 496 (775)
T ss_pred eeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCce
Confidence 9998754 58999999999999997641 11 1334699999999999999999999999999999999999
Q ss_pred eEEEEeeccCCeEEEEecCC-CEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 010754 349 WKQQFEFHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNM 427 (502)
Q Consensus 349 ~~~~~~~~~~~v~~v~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~ 427 (502)
...++.+|...+.++.|++. ..+++++.|++|+||.+.+..++++|.||...|..+.|-.+|+.|+||+.||-|+||++
T Consensus 497 l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWni 576 (775)
T KOG0319|consen 497 LLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNI 576 (775)
T ss_pred EEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEec
Confidence 99999999999999999876 55889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 428 KQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 428 ~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
+++.|+.++.+|+..|++++-+|.+. .+++|++|+.+.+|-
T Consensus 577 kt~eC~~tlD~H~DrvWaL~~~~~~~-------~~~tgg~Dg~i~~wk 617 (775)
T KOG0319|consen 577 KTNECEMTLDAHNDRVWALSVSPLLD-------MFVTGGGDGRIIFWK 617 (775)
T ss_pred cchhhhhhhhhccceeEEEeecCccc-------eeEecCCCeEEEEee
Confidence 99999999999999999999999987 788899999999994
No 21
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=100.00 E-value=1.1e-32 Score=238.42 Aligned_cols=261 Identities=24% Similarity=0.404 Sum_probs=220.8
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
++..+.||++.|+.+.|+|+|.+||||+.|..|.+|++..... -.....+|+++|..+.|.+|+
T Consensus 39 p~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdce----------------N~~~lkgHsgAVM~l~~~~d~ 102 (338)
T KOG0265|consen 39 PIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCE----------------NFWVLKGHSGAVMELHGMRDG 102 (338)
T ss_pred hhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEecccccc----------------ceeeeccccceeEeeeeccCC
Confidence 4567889999999999999999999999999999999765321 111223788999999999999
Q ss_pred CEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCC-EEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEE
Q 010754 287 TLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD 364 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~-~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~ 364 (502)
+.|++++.|.+|+.||.+ ++....+..|..-|.++.-+..|. .+.+++.|+++++||+++...++++. ..-+++++.
T Consensus 103 s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~-~kyqltAv~ 181 (338)
T KOG0265|consen 103 SHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE-NKYQLTAVG 181 (338)
T ss_pred CEEEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccc-cceeEEEEE
Confidence 999999999999999976 677888999999999998666665 45578889999999999988887764 345789999
Q ss_pred ecC-CCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC----CeeEEEeccC
Q 010754 365 WRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ----DKYVHDLREH 439 (502)
Q Consensus 365 ~~~-~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~----~~~~~~~~~h 439 (502)
|.. ...+++|+-|+.|++||++.+..+.++.||.++|+.+..+|+|.++.+-+.|.++++||++. ..++..+.+|
T Consensus 182 f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~ 261 (338)
T KOG0265|consen 182 FKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGH 261 (338)
T ss_pred ecccccceeeccccCceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecc
Confidence 955 56699999999999999999999999999999999999999999999999999999999874 4567777765
Q ss_pred C----CcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe---eeEEEeeecccccCc
Q 010754 440 S----KEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC---SIYFKYFGTTERANL 491 (502)
Q Consensus 440 ~----~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~---~~~~~~~g~~~~~~~ 491 (502)
. ......+|+|++. .+-.+++|..+.+|+. .+.|...|.+...+.
T Consensus 262 ~hnfeknlL~cswsp~~~-------~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~ 313 (338)
T KOG0265|consen 262 IHNFEKNLLKCSWSPNGT-------KITAGSADRFVYVWDTTSRRILYKLPGHYGSVNE 313 (338)
T ss_pred hhhhhhhcceeeccCCCC-------ccccccccceEEEeecccccEEEEcCCcceeEEE
Confidence 4 3467789999998 6778899999999974 446667777765544
No 22
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=100.00 E-value=1.2e-31 Score=237.69 Aligned_cols=246 Identities=22% Similarity=0.387 Sum_probs=216.6
Q ss_pred CCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC
Q 010754 205 NSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 284 (502)
Q Consensus 205 ~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~ 284 (502)
...+.+|..|+++|++++.+|+.++++||+.|....+|++.++.. .....+|...|+++.|+.
T Consensus 54 DdS~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~-----------------~~eltgHKDSVt~~~Fsh 116 (399)
T KOG0296|consen 54 DDSLVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEF-----------------AGELTGHKDSVTCCSFSH 116 (399)
T ss_pred ccceeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcc-----------------eeEecCCCCceEEEEEcc
Confidence 345788999999999999999999999999999999999998763 233456788999999999
Q ss_pred CCCEEEEEECCCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEE
Q 010754 285 EGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDV 363 (502)
Q Consensus 285 ~g~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v 363 (502)
+|.+||+|+.+|.|+||.... .....+...-..|.=|+|+|.+..|++|+.||.+.+|.+.++...+.+.+|..++++=
T Consensus 117 dgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G 196 (399)
T KOG0296|consen 117 DGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCG 196 (399)
T ss_pred CceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccc
Confidence 999999999999999999764 4555665566778889999999999999999999999999988899999999999999
Q ss_pred EecCC-CEEEEEeCCCeEEEEEcCCCcceEEEe-----------------------------------------------
Q 010754 364 DWRNN-VSFATSSTDNMIYVCKIGENRPIKTFA----------------------------------------------- 395 (502)
Q Consensus 364 ~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~----------------------------------------------- 395 (502)
.|.|+ .+++++..||+|++|+..+++++.++.
T Consensus 197 ~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~ 276 (399)
T KOG0296|consen 197 EFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVP 276 (399)
T ss_pred cccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCc
Confidence 99665 458899999999999999887663332
Q ss_pred ------------------------------------------------cCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 010754 396 ------------------------------------------------GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNM 427 (502)
Q Consensus 396 ------------------------------------------------~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~ 427 (502)
.|...|+.+.|-+ ..+|++++.+|.|+.||.
T Consensus 277 ~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~he~~V~~l~w~~-t~~l~t~c~~g~v~~wDa 355 (399)
T KOG0296|consen 277 ELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICEHEDGVTKLKWLN-TDYLLTACANGKVRQWDA 355 (399)
T ss_pred cccccchhhhhhhhhcccccccchhhcccccceEEEEecccchhheeccCCCceEEEEEcC-cchheeeccCceEEeeec
Confidence 4677899999998 789999999999999999
Q ss_pred CCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 428 KQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 428 ~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
++|+++..+.+|..+|.+++.+|+++ .++++|.|+..+++.
T Consensus 356 RtG~l~~~y~GH~~~Il~f~ls~~~~-------~vvT~s~D~~a~VF~ 396 (399)
T KOG0296|consen 356 RTGQLKFTYTGHQMGILDFALSPQKR-------LVVTVSDDNTALVFE 396 (399)
T ss_pred cccceEEEEecCchheeEEEEcCCCc-------EEEEecCCCeEEEEe
Confidence 99999999999999999999999998 788888888888874
No 23
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=2e-31 Score=256.25 Aligned_cols=254 Identities=23% Similarity=0.421 Sum_probs=214.1
Q ss_pred eeeeCCC-ceEEeccCCCceEEEEEcCCCCeEEEEeCC-CcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCe
Q 010754 200 SFEIPNS-DVTILEGHTSEVCACAWSPAGSLLASGSGD-STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDV 277 (502)
Q Consensus 200 ~~~~~~~-~~~~l~~H~~~V~~~~~~p~~~~l~sgs~d-g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 277 (502)
.+++|.. .++.|.--..+|..++|+..|.+||.|+.. |.+-||+++.... ....++|...+
T Consensus 291 LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsY-----------------VlKQQgH~~~i 353 (893)
T KOG0291|consen 291 LYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESY-----------------VLKQQGHSDRI 353 (893)
T ss_pred EEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccce-----------------eeeccccccce
Confidence 4456653 456676677889999999999999999864 7999999987542 22335677889
Q ss_pred EEEEECCCCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeec
Q 010754 278 TTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH 356 (502)
Q Consensus 278 ~~l~~s~~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~ 356 (502)
++++++|||+++|+|+.||.|+|||.. +-+..++..|++.|+.++|+..|+.+++++.||+|+.||+...+..++|...
T Consensus 354 ~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P 433 (893)
T KOG0291|consen 354 TSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSP 433 (893)
T ss_pred eeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCC
Confidence 999999999999999999999999966 6788899999999999999999999999999999999999999988888754
Q ss_pred c-CCeEEEEecCCCEEEEEe-CCC-eEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCe-e
Q 010754 357 S-GPTLDVDWRNNVSFATSS-TDN-MIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDK-Y 432 (502)
Q Consensus 357 ~-~~v~~v~~~~~~~~~~~~-~d~-~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~-~ 432 (502)
. .+..+++-.+.+.+++++ .|. .|++|++.+|+.+..+.||+++|.+++|+|+|..|||+|.|.+||+||+-... .
T Consensus 434 ~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~ 513 (893)
T KOG0291|consen 434 EPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGT 513 (893)
T ss_pred CceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCce
Confidence 3 245666666666655544 444 48999999999999999999999999999999999999999999999986543 3
Q ss_pred EEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEeee
Q 010754 433 VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICSI 478 (502)
Q Consensus 433 ~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~ 478 (502)
+.++. +.+.+..++|+|+|. .+.+++.|+.+.+|+...
T Consensus 514 vEtl~-i~sdvl~vsfrPdG~-------elaVaTldgqItf~d~~~ 551 (893)
T KOG0291|consen 514 VETLE-IRSDVLAVSFRPDGK-------ELAVATLDGQITFFDIKE 551 (893)
T ss_pred eeeEe-eccceeEEEEcCCCC-------eEEEEEecceEEEEEhhh
Confidence 34444 677899999999998 899999999999997544
No 24
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=4.6e-31 Score=262.55 Aligned_cols=248 Identities=27% Similarity=0.432 Sum_probs=215.8
Q ss_pred eEEeccC-CCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 208 VTILEGH-TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 208 ~~~l~~H-~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
...+.+| ...|.|+.|+|+|+.|++++.|+.+++|+..+... .......+|...|.+++|+|++
T Consensus 151 ~~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~---------------~~~~~l~~h~~~v~~~~fs~d~ 215 (456)
T KOG0266|consen 151 EQTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKS---------------NLLRELSGHTRGVSDVAFSPDG 215 (456)
T ss_pred eeeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccc---------------hhhccccccccceeeeEECCCC
Confidence 4555554 89999999999999999999999999999965441 0112225678889999999999
Q ss_pred CEEEEEECCCeEEEEEC-CC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEE
Q 010754 287 TLLATGSYDGQARIWST-NG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD 364 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~-~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~ 364 (502)
+++++|+.|++|+|||+ .. ..+.++.+|...|++++|+|+++.+++|+.|++|++||+++++++..+.+|.++|..++
T Consensus 216 ~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~ 295 (456)
T KOG0266|consen 216 SYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLA 295 (456)
T ss_pred cEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEE
Confidence 99999999999999998 43 67789999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCC-EEEEEeCCCeEEEEEcCCCc--ceEEEecCCCc--EEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccC
Q 010754 365 WRNNV-SFATSSTDNMIYVCKIGENR--PIKTFAGHQGE--VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREH 439 (502)
Q Consensus 365 ~~~~~-~~~~~~~d~~i~i~d~~~~~--~~~~~~~h~~~--i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h 439 (502)
|++++ .+++++.|+.|++||+.++. ++..+.++... ++++.|+|++.+|++++.|+.+++||+..+.++..+.+|
T Consensus 296 f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~ 375 (456)
T KOG0266|consen 296 FSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGH 375 (456)
T ss_pred ECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeeccc
Confidence 97755 57788889999999999998 67788877665 999999999999999999999999999999999999988
Q ss_pred CCcE---EEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 440 SKEI---YTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 440 ~~~i---~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
...+ .+...++.|. .+++++.|+.+.+|+..
T Consensus 376 ~~~~~~~~~~~~~~~~~-------~i~sg~~d~~v~~~~~~ 409 (456)
T KOG0266|consen 376 SNLVRCIFSPTLSTGGK-------LIYSGSEDGSVYVWDSS 409 (456)
T ss_pred CCcceeEecccccCCCC-------eEEEEeCCceEEEEeCC
Confidence 8753 3344455555 88999999999999865
No 25
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=2.9e-32 Score=245.00 Aligned_cols=258 Identities=24% Similarity=0.361 Sum_probs=207.5
Q ss_pred ceeeeCCCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeE
Q 010754 199 ESFEIPNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVT 278 (502)
Q Consensus 199 ~~~~~~~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 278 (502)
...++|.+..++|..|++.|+-+.||++|++|||++.|.++.||.+...... .+.....+|..+|.
T Consensus 208 ~~~qip~qt~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~--------------kl~~tlvgh~~~V~ 273 (519)
T KOG0293|consen 208 GRLQIPSQTWQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHF--------------KLKKTLVGHSQPVS 273 (519)
T ss_pred CcccCCchhhhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcce--------------eeeeeeecccCceE
Confidence 3446788889999999999999999999999999999999999998764321 13344556788999
Q ss_pred EEEECCCCCEEEEEECCCeEEEEECCCceEEEecC--ccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCc--------
Q 010754 279 TLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSK--HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE-------- 348 (502)
Q Consensus 279 ~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~-------- 348 (502)
.+.||||.++|++|+.+..+.+||+.......... +...+.+++|.|||..+++|+.|+++..||+....
T Consensus 274 yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~~~~W~gvr 353 (519)
T KOG0293|consen 274 YIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNILGNWEGVR 353 (519)
T ss_pred EEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcchhhcccccc
Confidence 99999999999999999999999988655544433 34789999999999999999999999999875321
Q ss_pred --------------eEEEEe-------------------eccCCeEEEEecCCCEEE-EEeCCCeEEEEEcCCCcceEEE
Q 010754 349 --------------WKQQFE-------------------FHSGPTLDVDWRNNVSFA-TSSTDNMIYVCKIGENRPIKTF 394 (502)
Q Consensus 349 --------------~~~~~~-------------------~~~~~v~~v~~~~~~~~~-~~~~d~~i~i~d~~~~~~~~~~ 394 (502)
.+.... ....++++++.+.++.++ +.-.+..|++||+...+.+..+
T Consensus 354 ~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY 433 (519)
T KOG0293|consen 354 DPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKY 433 (519)
T ss_pred cceeEEEEEcCCCcEEEEEecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHh
Confidence 110000 012356777777666644 5557888999999998899999
Q ss_pred ecCCCc--EEEEEEcC-CCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCce
Q 010754 395 AGHQGE--VNCVKWDP-TGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYF 471 (502)
Q Consensus 395 ~~h~~~--i~~l~~sp-~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~ 471 (502)
.||... |..-+|-- +..++||||+|+.|+||+..+++++..+.||...|++|+|+|... .++..|+.|+++
T Consensus 434 ~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p------~m~ASasDDgtI 507 (519)
T KOG0293|consen 434 FGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADP------EMFASASDDGTI 507 (519)
T ss_pred hcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCH------HHhhccCCCCeE
Confidence 999653 44445544 457999999999999999999999999999999999999999877 466777778999
Q ss_pred EEEEe
Q 010754 472 LYWIC 476 (502)
Q Consensus 472 ~iw~~ 476 (502)
+||-.
T Consensus 508 RIWg~ 512 (519)
T KOG0293|consen 508 RIWGP 512 (519)
T ss_pred EEecC
Confidence 99964
No 26
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=3.6e-31 Score=263.33 Aligned_cols=246 Identities=26% Similarity=0.438 Sum_probs=211.1
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
..+.+.+|...|.+++|+|+++++++|+.|++|+|||+..... ......+|...|++++|+|+|
T Consensus 195 ~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~----------------~~~~l~gH~~~v~~~~f~p~g 258 (456)
T KOG0266|consen 195 LLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGR----------------NLKTLKGHSTYVTSVAFSPDG 258 (456)
T ss_pred hhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCe----------------EEEEecCCCCceEEEEecCCC
Confidence 5667789999999999999999999999999999999943311 122334678899999999999
Q ss_pred CEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCc--eEEEEeeccCC--eE
Q 010754 287 TLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE--WKQQFEFHSGP--TL 361 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~--~~~~~~~~~~~--v~ 361 (502)
+++++|+.|++|+|||++ +.+...+.+|...|.+++|++++++|++++.|+.|++||+.++. +...+..+... +.
T Consensus 259 ~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 338 (456)
T KOG0266|consen 259 NLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVT 338 (456)
T ss_pred CEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCcee
Confidence 999999999999999988 58888999999999999999999999999999999999999999 56666665555 89
Q ss_pred EEEecCCCE-EEEEeCCCeEEEEEcCCCcceEEEecCCCc---EEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEec
Q 010754 362 DVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGE---VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR 437 (502)
Q Consensus 362 ~v~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~---i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~ 437 (502)
.+.|+++.. +++++.|+.+++||+..+..+..+.+|... +.+...++.+.++++|+.|+.|++||+.++..+..+.
T Consensus 339 ~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~ 418 (456)
T KOG0266|consen 339 SVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRLE 418 (456)
T ss_pred EEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCccchhhhhc
Confidence 999977655 778888889999999999999999999875 4445567899999999999999999999999999999
Q ss_pred cC-CCcEEEEEEccCCCCCCCCCccEEEEee--cCceEEEE
Q 010754 438 EH-SKEIYTIRWSPTGSGTNNPNQQLILARL--IPYFLYWI 475 (502)
Q Consensus 438 ~h-~~~i~~v~~sp~g~~~~~~~~~l~las~--~~~~~iw~ 475 (502)
+| ...+..++|+|... .+..++. |+.+++|.
T Consensus 419 ~h~~~~~~~~~~~~~~~-------~~~s~s~~~d~~~~~w~ 452 (456)
T KOG0266|consen 419 GHSKAAVSDLSSHPTEN-------LIASSSFEGDGLIRLWK 452 (456)
T ss_pred CCCCCceeccccCCCcC-------eeeecCcCCCceEEEec
Confidence 99 88999999999988 4455553 34455554
No 27
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=100.00 E-value=2.1e-30 Score=243.67 Aligned_cols=245 Identities=31% Similarity=0.502 Sum_probs=213.0
Q ss_pred EEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCE
Q 010754 209 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 288 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~ 288 (502)
+.+++|.++|.+++|+|++++|++++.||.+++|++.++... .....|...+..+.|++++++
T Consensus 3 ~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~-----------------~~~~~~~~~i~~~~~~~~~~~ 65 (289)
T cd00200 3 RTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELL-----------------RTLKGHTGPVRDVAASADGTY 65 (289)
T ss_pred hHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcE-----------------EEEecCCcceeEEEECCCCCE
Confidence 567899999999999999999999999999999999875421 111234567889999999999
Q ss_pred EEEEECCCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecC
Q 010754 289 LATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN 367 (502)
Q Consensus 289 l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~ 367 (502)
+++++.+|.|++|+... .....+..|...|.++.|++++.++++++.|+.|.+||+++++....+..|...+.++.|.+
T Consensus 66 l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 145 (289)
T cd00200 66 LASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSP 145 (289)
T ss_pred EEEEcCCCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcC
Confidence 99999999999999875 56677788888999999999988888888899999999999998888888889999999998
Q ss_pred CCEEEEEe-CCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEE
Q 010754 368 NVSFATSS-TDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTI 446 (502)
Q Consensus 368 ~~~~~~~~-~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v 446 (502)
++.+++++ .++.|++||+++++.+..+..|...|.++.|+|+++.|++++.||.|++||+++++.+..+..|..+|.++
T Consensus 146 ~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~ 225 (289)
T cd00200 146 DGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSV 225 (289)
T ss_pred cCCEEEEEcCCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEE
Confidence 65555554 49999999999999999999999999999999999999999999999999999999999888899999999
Q ss_pred EEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 447 RWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 447 ~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
+|+|++. .++.++.++.+.+|...
T Consensus 226 ~~~~~~~-------~~~~~~~~~~i~i~~~~ 249 (289)
T cd00200 226 AFSPDGY-------LLASGSEDGTIRVWDLR 249 (289)
T ss_pred EEcCCCc-------EEEEEcCCCcEEEEEcC
Confidence 9999965 33444448899999754
No 28
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.8e-31 Score=251.48 Aligned_cols=243 Identities=24% Similarity=0.369 Sum_probs=219.6
Q ss_pred EEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCE
Q 010754 209 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 288 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~ 288 (502)
+.+..|+..|.++.|+|...+++++-.+|.|.||+.++......+. ...-+|.+..|-+..+.
T Consensus 7 rk~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfe-----------------V~~~PvRa~kfiaRknW 69 (794)
T KOG0276|consen 7 RKFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFE-----------------VSEVPVRAAKFIARKNW 69 (794)
T ss_pred hHhhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeee-----------------ecccchhhheeeeccce
Confidence 4556689999999999999999999999999999999876443221 12346888888888899
Q ss_pred EEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCC-CceEEEEeeccCCeEEEEec
Q 010754 289 LATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT-EEWKQQFEFHSGPTLDVDWR 366 (502)
Q Consensus 289 l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~v~~v~~~ 366 (502)
+++|+.|..|+||+.+ ...+..+..|..-|.+++.+|...+++++|.|-+|++||... ..+.++|.+|..-|+.++|.
T Consensus 70 iv~GsDD~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fn 149 (794)
T KOG0276|consen 70 IVTGSDDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFN 149 (794)
T ss_pred EEEecCCceEEEEecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEec
Confidence 9999999999999987 467889999999999999999999999999999999999865 46788999999999999997
Q ss_pred CC--CEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCC--CEEEEEeCCCcEEEEECCCCeeEEEeccCCCc
Q 010754 367 NN--VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG--SLLASCSDDVTAKIWNMKQDKYVHDLREHSKE 442 (502)
Q Consensus 367 ~~--~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g--~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~ 442 (502)
|. +.|++++-|++|++|.+.+..+..++.+|...|+|+.|-+-| .+|+||++|.+|+|||..+..|++++.+|...
T Consensus 150 PkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~N 229 (794)
T KOG0276|consen 150 PKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNN 229 (794)
T ss_pred CCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhccccc
Confidence 74 569999999999999999999999999999999999998855 69999999999999999999999999999999
Q ss_pred EEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 443 IYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 443 i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
|..+.|+|.-+ .++++|.|+++++|.
T Consensus 230 vs~v~fhp~lp-------iiisgsEDGTvriWh 255 (794)
T KOG0276|consen 230 VSFVFFHPELP-------IIISGSEDGTVRIWN 255 (794)
T ss_pred ceEEEecCCCc-------EEEEecCCccEEEec
Confidence 99999999988 788999999999995
No 29
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=100.00 E-value=1.6e-32 Score=241.56 Aligned_cols=251 Identities=23% Similarity=0.428 Sum_probs=213.9
Q ss_pred cccCCCCceeeeCCC----ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeec
Q 010754 192 IATTSASESFEIPNS----DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVK 267 (502)
Q Consensus 192 ~~~~~~~~~~~~~~~----~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (502)
+..+..+.++.++.. ..++|.||+++|.|+.|. .+.+++||.|.+|+|||+++++.+.
T Consensus 210 iVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~l~---------------- 271 (499)
T KOG0281|consen 210 IVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPLN---------------- 271 (499)
T ss_pred hhcccccCceEEeccccHHHHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCchhh----------------
Confidence 444555666666543 367889999999999995 5699999999999999999987543
Q ss_pred CccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCCc----eEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEE
Q 010754 268 GRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD----LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWD 343 (502)
Q Consensus 268 ~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd 343 (502)
....|...|..+.|+. .++++++.|.+|.+||+... +...+.+|...|..+.|+ .+++++++.|++|++|+
T Consensus 272 -tlihHceaVLhlrf~n--g~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~ 346 (499)
T KOG0281|consen 272 -TLIHHCEAVLHLRFSN--GYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWS 346 (499)
T ss_pred -HHhhhcceeEEEEEeC--CEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEe
Confidence 2345677899999975 49999999999999997643 445678999999999996 46999999999999999
Q ss_pred cCCCceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q 010754 344 VKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAK 423 (502)
Q Consensus 344 ~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~ 423 (502)
+.++.+++++.+|...|.++.+. +..+++|+.|.+|++||+..|.+++.+.||+.-|.|+.|+ .+.+++|..||+|+
T Consensus 347 ~st~efvRtl~gHkRGIAClQYr-~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd--~krIVSGaYDGkik 423 (499)
T KOG0281|consen 347 TSTCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIK 423 (499)
T ss_pred ccceeeehhhhcccccceehhcc-CeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheeec--CceeeeccccceEE
Confidence 99999999999999999888875 4568899999999999999999999999999999999996 67899999999999
Q ss_pred EEECCCCe---------eEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 424 IWNMKQDK---------YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 424 iwd~~~~~---------~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
|||+.++. |+..+..|++.|..+.|..- +++..|-|.++.+|++.
T Consensus 424 vWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD~f---------qIvsssHddtILiWdFl 477 (499)
T KOG0281|consen 424 VWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEF---------QIISSSHDDTILIWDFL 477 (499)
T ss_pred EEecccccCCcccccchHHHhhhhccceeEEEeecce---------EEEeccCCCeEEEEEcC
Confidence 99997653 45666689999999999875 56888889999999864
No 30
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.98 E-value=5.8e-31 Score=220.16 Aligned_cols=250 Identities=17% Similarity=0.310 Sum_probs=216.0
Q ss_pred eeCCCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEE
Q 010754 202 EIPNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLD 281 (502)
Q Consensus 202 ~~~~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~ 281 (502)
++|....++|..|.++|.++.|+-+|++.++++.|.+|++|+...+.++ ....+|...|..++
T Consensus 4 e~ptkr~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~li-----------------ktYsghG~EVlD~~ 66 (307)
T KOG0316|consen 4 ELPTKRLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALI-----------------KTYSGHGHEVLDAA 66 (307)
T ss_pred cCcchhceeecccccceEEEEEccCCCEEEEcCCCceEEeeccccccee-----------------eeecCCCceeeecc
Confidence 4677788999999999999999999999999999999999998877643 33455677899999
Q ss_pred ECCCCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC--ceEEEEeeccC
Q 010754 282 WNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE--EWKQQFEFHSG 358 (502)
Q Consensus 282 ~s~~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~--~~~~~~~~~~~ 358 (502)
.+.|...+++|+.|..|.+||++ ++....+.+|.+.|..++|+.+...+++|+.|.++++||-++. ++++.+.....
T Consensus 67 ~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D 146 (307)
T KOG0316|consen 67 LSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKD 146 (307)
T ss_pred ccccccccccCCCCceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcC
Confidence 99999999999999999999987 6778899999999999999999999999999999999998764 57788887888
Q ss_pred CeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEecc
Q 010754 359 PTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE 438 (502)
Q Consensus 359 ~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~ 438 (502)
.|.+|... +..+++|+.||+++.||++.++...-+-+ .+|++++|+++++.++.++.|++|++-|-.+|+++..+++
T Consensus 147 ~V~Si~v~-~heIvaGS~DGtvRtydiR~G~l~sDy~g--~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkG 223 (307)
T KOG0316|consen 147 GVSSIDVA-EHEIVAGSVDGTVRTYDIRKGTLSSDYFG--HPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKG 223 (307)
T ss_pred ceeEEEec-ccEEEeeccCCcEEEEEeecceeehhhcC--CcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcc
Confidence 88888864 45689999999999999999987666654 4799999999999999999999999999999999999999
Q ss_pred CCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 439 HSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 439 h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
|...=+.+..+-..+ +..++.+|.|+.+.+|+.
T Consensus 224 hkn~eykldc~l~qs-----dthV~sgSEDG~Vy~wdL 256 (307)
T KOG0316|consen 224 HKNMEYKLDCCLNQS-----DTHVFSGSEDGKVYFWDL 256 (307)
T ss_pred cccceeeeeeeeccc-----ceeEEeccCCceEEEEEe
Confidence 987665554443332 235677888888888864
No 31
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.98 E-value=7.2e-30 Score=236.38 Aligned_cols=269 Identities=19% Similarity=0.327 Sum_probs=206.4
Q ss_pred CCCcccccCCCCceeee---CC-CceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEE
Q 010754 187 PEPMDIATTSASESFEI---PN-SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLV 262 (502)
Q Consensus 187 ~~~~~~~~~~~~~~~~~---~~-~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~ 262 (502)
..|..+.+.+.+..+.+ |+ +.-..++.|..-|+|+.|+|||.++||++.||++.+||=.+++....+
T Consensus 158 sRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l--------- 228 (603)
T KOG0318|consen 158 SRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGEL--------- 228 (603)
T ss_pred CCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEe---------
Confidence 34667777777765543 22 334567889999999999999999999999999999998887643321
Q ss_pred EeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCCc------------------------------------
Q 010754 263 LKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD------------------------------------ 306 (502)
Q Consensus 263 ~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~------------------------------------ 306 (502)
....+|.+.|.+++|+||++.+++++.|.+++|||+...
T Consensus 229 -----~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in 303 (603)
T KOG0318|consen 229 -----EDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTIN 303 (603)
T ss_pred -----cCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEE
Confidence 114578899999999999999999999999999996421
Q ss_pred --------eEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEE-----------EEeecc-CC-------
Q 010754 307 --------LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQ-----------QFEFHS-GP------- 359 (502)
Q Consensus 307 --------~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~-----------~~~~~~-~~------- 359 (502)
....+.+|...|+++..+|++++|++|+.||.|.-||..++..-+ .+..+. +.
T Consensus 304 ~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~D 383 (603)
T KOG0318|consen 304 YLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWD 383 (603)
T ss_pred EecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecC
Confidence 112344699999999999999999999999999999987653211 111110 00
Q ss_pred --------------------------------------------------------------eEEEEecCC-CEEEEEeC
Q 010754 360 --------------------------------------------------------------TLDVDWRNN-VSFATSST 376 (502)
Q Consensus 360 --------------------------------------------------------------v~~v~~~~~-~~~~~~~~ 376 (502)
..+++.+++ ..+++|+.
T Consensus 384 d~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~ 463 (603)
T KOG0318|consen 384 DTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQ 463 (603)
T ss_pred CeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecc
Confidence 012223233 34788899
Q ss_pred CCeEEEEEcCCCc--ceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEE-EeccCCCcEEEEEEccCCC
Q 010754 377 DNMIYVCKIGENR--PIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH-DLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 377 d~~i~i~d~~~~~--~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~-~~~~h~~~i~~v~~sp~g~ 453 (502)
|+.|++|.+.... .......|.++|++++||||+.|||+|...+.+.+||+.+.+... .+.-|+..|.+++|+|+..
T Consensus 464 Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~ 543 (603)
T KOG0318|consen 464 DGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNK 543 (603)
T ss_pred cceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCce
Confidence 9999999987754 333556799999999999999999999999999999998877633 2335999999999999987
Q ss_pred CCCCCCccEEEEeecCceEEEEe
Q 010754 454 GTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 454 ~~~~~~~~l~las~~~~~~iw~~ 476 (502)
.+.+||.|..+.||..
T Consensus 544 -------~vATGSlDt~Viiysv 559 (603)
T KOG0318|consen 544 -------LVATGSLDTNVIIYSV 559 (603)
T ss_pred -------EEEeccccceEEEEEc
Confidence 6666777777888853
No 32
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=99.98 E-value=3.1e-30 Score=217.50 Aligned_cols=227 Identities=24% Similarity=0.395 Sum_probs=196.9
Q ss_pred CCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC
Q 010754 205 NSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 284 (502)
Q Consensus 205 ~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~ 284 (502)
+.++.++.+|++.|+++.|..+|++++|||.||++||||+....+. ....+..+|+++..+|
T Consensus 73 p~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~q------------------R~~~~~spVn~vvlhp 134 (311)
T KOG0315|consen 73 PNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQ------------------RNYQHNSPVNTVVLHP 134 (311)
T ss_pred CCceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccc------------------hhccCCCCcceEEecC
Confidence 3478999999999999999999999999999999999999874321 1223457899999999
Q ss_pred CCCEEEEEECCCeEEEEECCCc-eEEE-ecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCc------eEEEEeec
Q 010754 285 EGTLLATGSYDGQARIWSTNGD-LKCT-LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE------WKQQFEFH 356 (502)
Q Consensus 285 ~g~~l~s~~~dg~i~iwd~~~~-~~~~-~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~------~~~~~~~~ 356 (502)
+...|++|..+|.|++||+... .... ......+|.++...|+|.+++.+...|+.++|++-+.+ ++..+..|
T Consensus 135 nQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah 214 (311)
T KOG0315|consen 135 NQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAH 214 (311)
T ss_pred CcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecc
Confidence 9999999999999999998754 3222 33445789999999999999999999999999986543 55677889
Q ss_pred cCCeEEEEecCCCE-EEEEeCCCeEEEEEcCCC-cceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEE
Q 010754 357 SGPTLDVDWRNNVS-FATSSTDNMIYVCKIGEN-RPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH 434 (502)
Q Consensus 357 ~~~v~~v~~~~~~~-~~~~~~d~~i~i~d~~~~-~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~ 434 (502)
.+-+..+.++|+.. +++++.|.+++||+.... +.-..+.+|...+..++||.+|.||++|+.|+.+++|++..++.++
T Consensus 215 ~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~ 294 (311)
T KOG0315|consen 215 NGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVR 294 (311)
T ss_pred cceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceee
Confidence 99999999988765 889999999999999887 5667789999999999999999999999999999999999999999
Q ss_pred EeccCCCcEEEEEEc
Q 010754 435 DLREHSKEIYTIRWS 449 (502)
Q Consensus 435 ~~~~h~~~i~~v~~s 449 (502)
...+|..+..+++..
T Consensus 295 qy~gh~K~~vc~~ln 309 (311)
T KOG0315|consen 295 QYQGHHKAAVCVALN 309 (311)
T ss_pred ecCCcccccEEEEee
Confidence 999999888777654
No 33
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.98 E-value=1.4e-29 Score=237.96 Aligned_cols=245 Identities=28% Similarity=0.505 Sum_probs=218.1
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
....+.+|...+.++.|+|++++|++++.||.|++|++.+++... ....+...|.++.|++++
T Consensus 43 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~-----------------~~~~~~~~i~~~~~~~~~ 105 (289)
T cd00200 43 LLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVR-----------------TLTGHTSYVSSVAFSPDG 105 (289)
T ss_pred cEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceE-----------------EEeccCCcEEEEEEcCCC
Confidence 456788999999999999999999999999999999998753211 112345679999999999
Q ss_pred CEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEe
Q 010754 287 TLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW 365 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~ 365 (502)
+++++++.+|.|++|++. +.....+..|...|.+++|+|++.++++++.|+.|++||+++++.+..+..+...+.++.|
T Consensus 106 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~ 185 (289)
T cd00200 106 RILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAF 185 (289)
T ss_pred CEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEecCccccceEEE
Confidence 999988889999999987 5667777789999999999999888888888999999999999989889888889999999
Q ss_pred cCCC-EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEE
Q 010754 366 RNNV-SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIY 444 (502)
Q Consensus 366 ~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~ 444 (502)
.+++ .+++++.++.|++||+..++.+..+..|...+.++.|+|++.++++++.||.|++||+.+++.+..+..|...|.
T Consensus 186 ~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~ 265 (289)
T cd00200 186 SPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVT 265 (289)
T ss_pred CCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCceeEEEccccCCcEE
Confidence 8876 788888899999999999999998988999999999999999999998899999999999999999999999999
Q ss_pred EEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 445 TIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 445 ~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
+++|+|++. .+++++.++.+++|.
T Consensus 266 ~~~~~~~~~-------~l~~~~~d~~i~iw~ 289 (289)
T cd00200 266 SLAWSPDGK-------RLASGSADGTIRIWD 289 (289)
T ss_pred EEEECCCCC-------EEEEecCCCeEEecC
Confidence 999999987 788888889999984
No 34
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.98 E-value=3.5e-30 Score=222.94 Aligned_cols=266 Identities=20% Similarity=0.327 Sum_probs=222.6
Q ss_pred cccCCCCcccccCCCCceeeeCC-----CceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCC
Q 010754 183 GEKGPEPMDIATTSASESFEIPN-----SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGP 257 (502)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~ 257 (502)
..-.|....+++++.+..+-+++ +...+++||++.|..+.|.++++.|++++.|.+++.||+++++.+.
T Consensus 53 ~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~r------ 126 (338)
T KOG0265|consen 53 IKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIR------ 126 (338)
T ss_pred EEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeee------
Confidence 34455666677777777776665 3367889999999999999999999999999999999999988543
Q ss_pred ceeEEEeeecCccccCCCCeEEEEECCCC-CEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecC
Q 010754 258 LNVLVLKHVKGRTNEKSKDVTTLDWNGEG-TLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD 336 (502)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~v~~l~~s~~g-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d 336 (502)
....|...|.++.-+.-| .++.+|+.||++++||++.+....+...+-.++++.|...+..+.+|+-|
T Consensus 127 -----------k~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~s~qv~sggId 195 (338)
T KOG0265|consen 127 -----------KHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDTSDQVISGGID 195 (338)
T ss_pred -----------hhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEecccccceeecccc
Confidence 223456678887744444 46778889999999999877666666667889999999999999999999
Q ss_pred CeEEEEEcCCCceEEEEeeccCCeEEEEecCCCE-EEEEeCCCeEEEEEcCCC----cceEEEecCCC----cEEEEEEc
Q 010754 337 KTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGEN----RPIKTFAGHQG----EVNCVKWD 407 (502)
Q Consensus 337 ~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~~~~d~~i~i~d~~~~----~~~~~~~~h~~----~i~~l~~s 407 (502)
+.|++||++.+.....+.+|..+|+.+..++.+. +.+-+.|.++++||++.. +++..+.+|.. ....++|+
T Consensus 196 n~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~csws 275 (338)
T KOG0265|consen 196 NDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWS 275 (338)
T ss_pred CceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeecc
Confidence 9999999999999999999999999999977655 667799999999999854 45778887743 35578999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceE
Q 010754 408 PTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFL 472 (502)
Q Consensus 408 p~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~ 472 (502)
|+++.+.+|+.|..+++||......+..+.+|.+.|.++.|+|..+ .++++++|.++.
T Consensus 276 p~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~-------iils~~sdk~i~ 333 (338)
T KOG0265|consen 276 PNGTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEP-------IILSCSSDKTIY 333 (338)
T ss_pred CCCCccccccccceEEEeecccccEEEEcCCcceeEEEeeecCCCc-------EEEEeccCceeE
Confidence 9999999999999999999999999999999999999999999988 555666666544
No 35
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.97 E-value=4.5e-30 Score=227.05 Aligned_cols=268 Identities=22% Similarity=0.285 Sum_probs=230.4
Q ss_pred cCCCCcccccCCCCceeeeC----CCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCcee
Q 010754 185 KGPEPMDIATTSASESFEIP----NSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNV 260 (502)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~ 260 (502)
..|....+++++.+....|+ .+...+|.||...|..+++|+...+|++++.|+.|+.||++..+.+
T Consensus 159 vdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvI---------- 228 (460)
T KOG0285|consen 159 VDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVI---------- 228 (460)
T ss_pred eCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhH----------
Confidence 34555556777777666554 3445678999999999999999999999999999999999987643
Q ss_pred EEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeE
Q 010754 261 LVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTA 339 (502)
Q Consensus 261 ~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i 339 (502)
.+..+|-..|.|++.+|.-..|++|+.|.+++|||++. ..+..+.+|+.+|..+.+.|....+++|+.|++|
T Consensus 229 -------R~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tv 301 (460)
T KOG0285|consen 229 -------RHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTV 301 (460)
T ss_pred -------HHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCceE
Confidence 34456678899999999999999999999999999885 5677899999999999999988999999999999
Q ss_pred EEEEcCCCceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCC
Q 010754 340 IVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD 419 (502)
Q Consensus 340 ~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~d 419 (502)
++||++.|+....+..|...+.+++.+|....++++.-..|+.|++..+..+..+.+|..-|++++.+.|| ++++|++.
T Consensus 302 rlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~dnik~w~~p~g~f~~nlsgh~~iintl~~nsD~-v~~~G~dn 380 (460)
T KOG0285|consen 302 RLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPDNIKQWKLPEGEFLQNLSGHNAIINTLSVNSDG-VLVSGGDN 380 (460)
T ss_pred EEeeeccCceeEeeecccceeeEEecCCchhhhhccCCccceeccCCccchhhccccccceeeeeeeccCc-eEEEcCCc
Confidence 99999999999999999999999999987765555555678999999999999999999999999998776 77899999
Q ss_pred CcEEEEECCCCeeEEEec--------cCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 420 VTAKIWNMKQDKYVHDLR--------EHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 420 g~i~iwd~~~~~~~~~~~--------~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
|.|.+||.+++-..+.+. .....|++.+|...|. +|+++.+|.++++|--+
T Consensus 381 g~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~-------rlit~eadKtIk~~keD 439 (460)
T KOG0285|consen 381 GSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGS-------RLITGEADKTIKMYKED 439 (460)
T ss_pred eEEEEEecCcCcccccccccccCCccccccceeEEeecccCc-------eEEeccCCcceEEEecc
Confidence 999999999987655442 1234699999999998 99999999999999643
No 36
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=2.2e-29 Score=268.93 Aligned_cols=248 Identities=18% Similarity=0.348 Sum_probs=206.3
Q ss_pred eccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC-CCCEE
Q 010754 211 LEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EGTLL 289 (502)
Q Consensus 211 l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~-~g~~l 289 (502)
+.+|.+.|++++|+|+|++||+|+.|++|+||++.......... ..... . ..+...|.+++|++ ++.+|
T Consensus 479 ~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~--~~~~~---~-----~~~~~~v~~l~~~~~~~~~l 548 (793)
T PLN00181 479 LLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDI--HYPVV---E-----LASRSKLSGICWNSYIKSQV 548 (793)
T ss_pred ccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCccccccccc--ccceE---E-----ecccCceeeEEeccCCCCEE
Confidence 44599999999999999999999999999999986421100000 00000 0 11235699999987 57899
Q ss_pred EEEECCCeEEEEECC-CceEEEecCccCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecC
Q 010754 290 ATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN 367 (502)
Q Consensus 290 ~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~ 367 (502)
++++.||.|++||+. +.....+.+|...|++++|+| ++.+|++|+.|++|++||++++..+..+..+ ..+.++.|.+
T Consensus 549 as~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~ 627 (793)
T PLN00181 549 ASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFPS 627 (793)
T ss_pred EEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEeC
Confidence 999999999999976 466778889999999999997 7889999999999999999999988888754 5788999943
Q ss_pred --CCEEEEEeCCCeEEEEEcCCCc-ceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC------CeeEEEecc
Q 010754 368 --NVSFATSSTDNMIYVCKIGENR-PIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ------DKYVHDLRE 438 (502)
Q Consensus 368 --~~~~~~~~~d~~i~i~d~~~~~-~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~------~~~~~~~~~ 438 (502)
+..+++|+.|+.|++||+++.. ++..+.+|...|+++.|. ++.+|++++.|++|+|||++. .+++..+.+
T Consensus 628 ~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~g 706 (793)
T PLN00181 628 ESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMG 706 (793)
T ss_pred CCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcC
Confidence 5679999999999999998765 677888999999999997 788999999999999999974 367888999
Q ss_pred CCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 439 HSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 439 h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
|...+..++|+|+|. .+++++.|+.+++|...
T Consensus 707 h~~~i~~v~~s~~~~-------~lasgs~D~~v~iw~~~ 738 (793)
T PLN00181 707 HTNVKNFVGLSVSDG-------YIATGSETNEVFVYHKA 738 (793)
T ss_pred CCCCeeEEEEcCCCC-------EEEEEeCCCEEEEEECC
Confidence 999999999999987 77888889999999743
No 37
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.97 E-value=4.4e-29 Score=213.22 Aligned_cols=259 Identities=23% Similarity=0.409 Sum_probs=210.4
Q ss_pred ccccCCCCceeeeCCCc-------eEEe-ccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEE
Q 010754 191 DIATTSASESFEIPNSD-------VTIL-EGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLV 262 (502)
Q Consensus 191 ~~~~~~~~~~~~~~~~~-------~~~l-~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~ 262 (502)
.+++.+.+..+++.... ..+| .+|+..|..++|+|.|++||+||.|+++.||.-..+...
T Consensus 29 ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efe------------ 96 (312)
T KOG0645|consen 29 ILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFE------------ 96 (312)
T ss_pred EEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCCCcee------------
Confidence 45666777766665433 2333 479999999999999999999999999999986655421
Q ss_pred EeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCC----ceEEEecCccCCeEEEEEecCCCEEEEEecCCe
Q 010754 263 LKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG----DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKT 338 (502)
Q Consensus 263 ~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~----~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~ 338 (502)
......+|...|.|++|+++|++||+|+.|..|-||.+.. .+...+..|...|..+.|+|....|++++.|++
T Consensus 97 ---cv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnT 173 (312)
T KOG0645|consen 97 ---CVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNT 173 (312)
T ss_pred ---EEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCe
Confidence 2334456788999999999999999999999999998762 456788999999999999999999999999999
Q ss_pred EEEEEcC---CCceEEEEeeccCCeEEEEecC-CCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEE
Q 010754 339 AIVWDVK---TEEWKQQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLA 414 (502)
Q Consensus 339 i~~wd~~---~~~~~~~~~~~~~~v~~v~~~~-~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~la 414 (502)
|++|+-. ...+.+++.+|...|.+++|.+ +.++++++.|++++||.....-+ ..|...+..+.|. ...||
T Consensus 174 Ik~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~~~----~~~sr~~Y~v~W~--~~~Ia 247 (312)
T KOG0645|consen 174 IKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTDLS----GMHSRALYDVPWD--NGVIA 247 (312)
T ss_pred EEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccCcc----hhcccceEeeeec--ccceE
Confidence 9999865 3457889999999999999988 55899999999999998764322 2377889999998 45899
Q ss_pred EEeCCCcEEEEECCCC------eeEE-EeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 415 SCSDDVTAKIWNMKQD------KYVH-DLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 415 s~s~dg~i~iwd~~~~------~~~~-~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
|++.|+.|+++.-... +.+. .-..|...|++++|.|.+. ..|++++.||.+++|.+
T Consensus 248 S~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~------~~L~s~~DDG~v~~W~l 310 (312)
T KOG0645|consen 248 SGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVS------NRLASGGDDGIVNFWEL 310 (312)
T ss_pred eccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCC------CceeecCCCceEEEEEe
Confidence 9999999999986542 1121 2247889999999999543 36788888899999965
No 38
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=3.6e-30 Score=242.73 Aligned_cols=239 Identities=20% Similarity=0.268 Sum_probs=213.0
Q ss_pred CceeeeCCCc----eEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccC
Q 010754 198 SESFEIPNSD----VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEK 273 (502)
Q Consensus 198 ~~~~~~~~~~----~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (502)
.+.+.+++-. ++.+.-..-+|.++.|-+..+++++|+.|..|+||+..+...+ ..+..|
T Consensus 34 nG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ekV-----------------~~FeAH 96 (794)
T KOG0276|consen 34 NGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEKV-----------------KTFEAH 96 (794)
T ss_pred cCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEecccceee-----------------EEeecc
Confidence 3444555433 4455556789999999999999999999999999999987632 223456
Q ss_pred CCCeEEEEECCCCCEEEEEECCCeEEEEECCC--ceEEEecCccCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCCceE
Q 010754 274 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNG--DLKCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEEWK 350 (502)
Q Consensus 274 ~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~v~~l~~~~-~~~~l~s~~~d~~i~~wd~~~~~~~ 350 (502)
...|.+++.+|...++++++.|-+|++||.++ .+.+++.+|..-|.+++|+| |.+.|++++.|++|++|.+.+..+.
T Consensus 97 ~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~n 176 (794)
T KOG0276|consen 97 SDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPN 176 (794)
T ss_pred ccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCc
Confidence 78899999999999999999999999999876 46778999999999999999 5589999999999999999999999
Q ss_pred EEEeeccCCeEEEEecCCC---EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 010754 351 QQFEFHSGPTLDVDWRNNV---SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNM 427 (502)
Q Consensus 351 ~~~~~~~~~v~~v~~~~~~---~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~ 427 (502)
.++.+|...|.+++|-+.+ .+++|+.|.+|+|||..+..+++++.||...|+.+.|+|.-.+++|||+||++|||+.
T Consensus 177 fTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs 256 (794)
T KOG0276|consen 177 FTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNS 256 (794)
T ss_pred eeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecC
Confidence 9999999999999997766 7999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeEEEeccCCCcEEEEEEccCCC
Q 010754 428 KQDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 428 ~~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
.+.++..++.-.-..|++|+-.+.+.
T Consensus 257 ~Ty~lE~tLn~gleRvW~I~~~k~~~ 282 (794)
T KOG0276|consen 257 KTYKLEKTLNYGLERVWCIAAHKGDG 282 (794)
T ss_pred cceehhhhhhcCCceEEEEeecCCCC
Confidence 99998888887777899999888776
No 39
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=7.8e-29 Score=264.76 Aligned_cols=238 Identities=23% Similarity=0.333 Sum_probs=199.9
Q ss_pred CCCceEEEEEcCC-CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC-CCCEEEE
Q 010754 214 HTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EGTLLAT 291 (502)
Q Consensus 214 H~~~V~~~~~~p~-~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~-~g~~l~s 291 (502)
+...|.+++|+|. +.+|++++.||+|++||+.+++.. .....|...|++++|+| ++.+|++
T Consensus 531 ~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~-----------------~~~~~H~~~V~~l~~~p~~~~~L~S 593 (793)
T PLN00181 531 SRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLV-----------------TEMKEHEKRVWSIDYSSADPTLLAS 593 (793)
T ss_pred ccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEE-----------------EEecCCCCCEEEEEEcCCCCCEEEE
Confidence 3467999999984 789999999999999999875421 12245678899999997 7899999
Q ss_pred EECCCeEEEEECCC-ceEEEecCccCCeEEEEEe-cCCCEEEEEecCCeEEEEEcCCCc-eEEEEeeccCCeEEEEecCC
Q 010754 292 GSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWN-KKGDYLLTGSCDKTAIVWDVKTEE-WKQQFEFHSGPTLDVDWRNN 368 (502)
Q Consensus 292 ~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~-~~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~v~~v~~~~~ 368 (502)
|+.||.|++||+.. .....+. +...|.++.|+ +++.+|++|+.||.|++||+++.. .+..+.+|...|..+.|.++
T Consensus 594 gs~Dg~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~~~ 672 (793)
T PLN00181 594 GSDDGSVKLWSINQGVSIGTIK-TKANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFVDS 672 (793)
T ss_pred EcCCCEEEEEECCCCcEEEEEe-cCCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEeCC
Confidence 99999999999874 4444554 34689999995 478999999999999999998765 46677889999999999988
Q ss_pred CEEEEEeCCCeEEEEEcCC------CcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEe------
Q 010754 369 VSFATSSTDNMIYVCKIGE------NRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDL------ 436 (502)
Q Consensus 369 ~~~~~~~~d~~i~i~d~~~------~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~------ 436 (502)
..+++++.|+.|++||++. ..++..+.+|...+++++|+|++.+|++|+.||.|+||+......+..+
T Consensus 673 ~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~ 752 (793)
T PLN00181 673 STLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTID 752 (793)
T ss_pred CEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCC
Confidence 8999999999999999974 3578899999999999999999999999999999999998765443222
Q ss_pred -------ccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 437 -------REHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 437 -------~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
..|...|.+++|+|+|. .+++|+.++.+++|..
T Consensus 753 ~~~~~~~~~~~~~V~~v~ws~~~~-------~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 753 PVSGLEVDDASQFISSVCWRGQSS-------TLVAANSTGNIKILEM 792 (793)
T ss_pred cccccccCCCCcEEEEEEEcCCCC-------eEEEecCCCcEEEEec
Confidence 23455699999999998 7888999999999963
No 40
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=99.97 E-value=1.5e-29 Score=218.21 Aligned_cols=199 Identities=17% Similarity=0.368 Sum_probs=183.3
Q ss_pred ccCCCCeEEEEECCCCCEEEEEECCCeEEEEEC-CCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC--
Q 010754 271 NEKSKDVTTLDWNGEGTLLATGSYDGQARIWST-NGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE-- 347 (502)
Q Consensus 271 ~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~-- 347 (502)
.+|...|.++.|++|.++|++++.||.+.|||. .+.....+.-...-|..++|+|.|+++++|+.|+...||++.+.
T Consensus 52 kGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~ 131 (343)
T KOG0286|consen 52 KGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDA 131 (343)
T ss_pred cccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEecccccc
Confidence 456788999999999999999999999999994 45566667777788999999999999999999999999999865
Q ss_pred ----ceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcC-CCCEEEEEeCCCcE
Q 010754 348 ----EWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-TGSLLASCSDDVTA 422 (502)
Q Consensus 348 ----~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp-~g~~las~s~dg~i 422 (502)
...+.+.+|.+-+.++.|.++..+++++.|.+..+||+.+++.+..|.||.+.|.++.++| +++.+++|+-|+..
T Consensus 132 ~g~~~v~r~l~gHtgylScC~f~dD~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~a 211 (343)
T KOG0286|consen 132 EGNVRVSRELAGHTGYLSCCRFLDDNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSA 211 (343)
T ss_pred cccceeeeeecCccceeEEEEEcCCCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccce
Confidence 3556788999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred EEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 423 KIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 423 ~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
++||++.+.+++.|.+|.+.|++|+|.|+|. .+.++|.|++.++++.
T Consensus 212 klWD~R~~~c~qtF~ghesDINsv~ffP~G~-------afatGSDD~tcRlyDl 258 (343)
T KOG0286|consen 212 KLWDVRSGQCVQTFEGHESDINSVRFFPSGD-------AFATGSDDATCRLYDL 258 (343)
T ss_pred eeeeccCcceeEeecccccccceEEEccCCC-------eeeecCCCceeEEEee
Confidence 9999999999999999999999999999998 6778888888888864
No 41
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.97 E-value=1.6e-31 Score=235.30 Aligned_cols=234 Identities=21% Similarity=0.398 Sum_probs=205.5
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE
Q 010754 214 HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 293 (502)
Q Consensus 214 H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~ 293 (502)
..+.|+|+.+. ...+++|..|.+|+|||..+-.+ .....+|++.|.|+.|. .+.|++|+
T Consensus 196 ~skgVYClQYD--D~kiVSGlrDnTikiWD~n~~~c-----------------~~~L~GHtGSVLCLqyd--~rviisGS 254 (499)
T KOG0281|consen 196 NSKGVYCLQYD--DEKIVSGLRDNTIKIWDKNSLEC-----------------LKILTGHTGSVLCLQYD--ERVIVSGS 254 (499)
T ss_pred cCCceEEEEec--chhhhcccccCceEEeccccHHH-----------------HHhhhcCCCcEEeeecc--ceEEEecC
Confidence 45789999984 56799999999999999876542 33456788999999986 45999999
Q ss_pred CCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCc---eEEEEeeccCCeEEEEecCCC
Q 010754 294 YDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE---WKQQFEFHSGPTLDVDWRNNV 369 (502)
Q Consensus 294 ~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~---~~~~~~~~~~~v~~v~~~~~~ 369 (502)
.|.+|+|||.+ +..+.++..|...|..+.|+. .++++++.|.++.+||+.+.. +.+.+.+|...|..+.|...
T Consensus 255 SDsTvrvWDv~tge~l~tlihHceaVLhlrf~n--g~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~k- 331 (499)
T KOG0281|consen 255 SDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSN--GYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK- 331 (499)
T ss_pred CCceEEEEeccCCchhhHHhhhcceeEEEEEeC--CEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccccc-
Confidence 99999999987 567778899999999999974 699999999999999997654 34456789999999999766
Q ss_pred EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEc
Q 010754 370 SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWS 449 (502)
Q Consensus 370 ~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~s 449 (502)
.+++++.|.+|++|++.+...++++.+|...|.|+.+. |+++++||.|.+|++||+..|.|++.+.+|..-|.++.|.
T Consensus 332 yIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQYr--~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd 409 (499)
T KOG0281|consen 332 YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD 409 (499)
T ss_pred eEEEecCCceEEEEeccceeeehhhhcccccceehhcc--CeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheeec
Confidence 89999999999999999999999999999999999885 8999999999999999999999999999999999999998
Q ss_pred cCCCCCCCCCccEEEEeecCceEEEEeeeEEEe
Q 010754 450 PTGSGTNNPNQQLILARLIPYFLYWICSIYFKY 482 (502)
Q Consensus 450 p~g~~~~~~~~~l~las~~~~~~iw~~~~~~~~ 482 (502)
.. .++.|..||.+++|++.....+
T Consensus 410 ~k---------rIVSGaYDGkikvWdl~aaldp 433 (499)
T KOG0281|consen 410 NK---------RIVSGAYDGKIKVWDLQAALDP 433 (499)
T ss_pred Cc---------eeeeccccceEEEEecccccCC
Confidence 65 6799999999999987665555
No 42
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.97 E-value=2.2e-29 Score=224.52 Aligned_cols=262 Identities=24% Similarity=0.409 Sum_probs=217.5
Q ss_pred ccccCCCCce---eeeCCCceEEeccCCCceEEEEEcCCC---CeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEe
Q 010754 191 DIATTSASES---FEIPNSDVTILEGHTSEVCACAWSPAG---SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLK 264 (502)
Q Consensus 191 ~~~~~~~~~~---~~~~~~~~~~l~~H~~~V~~~~~~p~~---~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~ 264 (502)
.|.++.-+.. +....+.+.++.||.++|.+++|.-.. ..|++++.|.++++|.++.+.....
T Consensus 117 ~IltgsYDg~~riWd~~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~------------ 184 (423)
T KOG0313|consen 117 WILTGSYDGTSRIWDLKGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVK------------ 184 (423)
T ss_pred eEEEeecCCeeEEEecCCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhh------------
Confidence 4455544444 445567789999999999999987533 3699999999999999987653211
Q ss_pred eecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECC--------------------------CceEEEecCccCCe
Q 010754 265 HVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN--------------------------GDLKCTLSKHKGPI 318 (502)
Q Consensus 265 ~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~--------------------------~~~~~~~~~~~~~v 318 (502)
......+|...|-+++..++|..+++|+.|..|.||+.. ...+..+.+|..+|
T Consensus 185 -~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~V 263 (423)
T KOG0313|consen 185 -ALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPV 263 (423)
T ss_pred -HHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccce
Confidence 111223788999999999999999999999999999821 11355778999999
Q ss_pred EEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCC-CEEEEEeCCCeEEEEEcCCCc---ceEEE
Q 010754 319 FSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENR---PIKTF 394 (502)
Q Consensus 319 ~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~-~~~~~~~~d~~i~i~d~~~~~---~~~~~ 394 (502)
.++.|++ ...+++++.|.+|+.||+.++..+.++.+ ...+.++++.+. ..+++|+.|..|++||.+++. +..+|
T Consensus 264 s~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~-~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~ 341 (423)
T KOG0313|consen 264 SSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTT-NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSL 341 (423)
T ss_pred eeEEEcC-CCceEeecccceEEEEEeecccceeeeec-CcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEee
Confidence 9999998 67899999999999999999998887764 456889999774 558899999999999999874 56789
Q ss_pred ecCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCe-eEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceE
Q 010754 395 AGHQGEVNCVKWDPTGS-LLASCSDDVTAKIWNMKQDK-YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFL 472 (502)
Q Consensus 395 ~~h~~~i~~l~~sp~g~-~las~s~dg~i~iwd~~~~~-~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~ 472 (502)
.+|.+.|.++.|+|... .|++|+.|+++++||+++.+ ++..+.+|...|.++.|..-+. +++|+.|..++
T Consensus 342 ~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~~~~--------IvSGGaD~~l~ 413 (423)
T KOG0313|consen 342 IGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNEGGL--------IVSGGADNKLR 413 (423)
T ss_pred ecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccCCce--------EEeccCcceEE
Confidence 99999999999999765 58999999999999999988 9999999999999999998764 78999999998
Q ss_pred EEE
Q 010754 473 YWI 475 (502)
Q Consensus 473 iw~ 475 (502)
++-
T Consensus 414 i~~ 416 (423)
T KOG0313|consen 414 IFK 416 (423)
T ss_pred Eec
Confidence 874
No 43
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=6.2e-30 Score=216.40 Aligned_cols=240 Identities=25% Similarity=0.452 Sum_probs=202.9
Q ss_pred CCceEEEEEcCC-CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC-CCCEEEEE
Q 010754 215 TSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EGTLLATG 292 (502)
Q Consensus 215 ~~~V~~~~~~p~-~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~-~g~~l~s~ 292 (502)
.+.++.++|+++ .+.+++++.||+++|||+.... .+......|...|.++.|++ .++.++++
T Consensus 60 ~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s----------------~Pi~~~kEH~~EV~Svdwn~~~r~~~lts 123 (311)
T KOG0277|consen 60 EDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPS----------------KPIHKFKEHKREVYSVDWNTVRRRIFLTS 123 (311)
T ss_pred ccceeEeeecCCCcceEEEEecCceEEEeccCCCC----------------cchhHHHhhhhheEEeccccccceeEEee
Confidence 477999999996 6799999999999999954322 12344566788999999998 56678889
Q ss_pred ECCCeEEEEECC-CceEEEecCccCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEec--CC
Q 010754 293 SYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR--NN 368 (502)
Q Consensus 293 ~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~--~~ 368 (502)
+.||+|++|+.+ ...+.++.+|...|+..+|+| ..+.+++++.|+++++||++.......+..|...+.++.|+ +.
T Consensus 124 SWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~ 203 (311)
T KOG0277|consen 124 SWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNH 203 (311)
T ss_pred ccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCC
Confidence 999999999965 677889999999999999999 55899999999999999998765555588899999999995 46
Q ss_pred CEEEEEeCCCeEEEEEcCCC-cceEEEecCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEECCC-CeeEEEeccCCCcEEE
Q 010754 369 VSFATSSTDNMIYVCKIGEN-RPIKTFAGHQGEVNCVKWDPT-GSLLASCSDDVTAKIWNMKQ-DKYVHDLREHSKEIYT 445 (502)
Q Consensus 369 ~~~~~~~~d~~i~i~d~~~~-~~~~~~~~h~~~i~~l~~sp~-g~~las~s~dg~i~iwd~~~-~~~~~~~~~h~~~i~~ 445 (502)
..+++|+.|+.|+.||+++- .++..+.+|.-.|..++|||. ..+|||++.|-++||||... ..++.+...|+.-+..
T Consensus 204 ~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g 283 (311)
T KOG0277|consen 204 NVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCG 283 (311)
T ss_pred cEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhccceEEec
Confidence 67999999999999999975 578999999999999999996 46899999999999999874 4556667788888999
Q ss_pred EEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 446 IRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 446 v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
+.||+-.. .++...+-|..+.||..
T Consensus 284 ~Dws~~~~------~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 284 LDWSLFDP------GQVASTGWDELLYVWNP 308 (311)
T ss_pred cccccccC------ceeeecccccceeeecc
Confidence 99999754 35566677888998874
No 44
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.97 E-value=1.1e-29 Score=220.71 Aligned_cols=263 Identities=22% Similarity=0.352 Sum_probs=208.3
Q ss_pred CCCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCC----ccCCCCCCCceeEEEeeecCccccCCCCeEE
Q 010754 204 PNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGT----SNGGAQNGPLNVLVLKHVKGRTNEKSKDVTT 279 (502)
Q Consensus 204 ~~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 279 (502)
+.-....+..|++++.+.+|+|||.++|||+.|..|+|.|++..- ......+.... -.........|...|++
T Consensus 101 ~~yEt~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa---~hPvIRTlYDH~devn~ 177 (430)
T KOG0640|consen 101 SEYETKYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQA---RHPVIRTLYDHVDEVND 177 (430)
T ss_pred cccceEEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCccc---CCceEeehhhccCcccc
Confidence 344567889999999999999999999999999999999998421 11111111100 01123344567889999
Q ss_pred EEECCCCCEEEEEECCCeEEEEECCCceE---EEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEE---
Q 010754 280 LDWNGEGTLLATGSYDGQARIWSTNGDLK---CTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF--- 353 (502)
Q Consensus 280 l~~s~~g~~l~s~~~dg~i~iwd~~~~~~---~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~--- 353 (502)
+.|+|....|++|+.|++|++||...... ........+|.++.|+|.|.+|++|..-.++++||+.+.++...-
T Consensus 178 l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd 257 (430)
T KOG0640|consen 178 LDFHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPD 257 (430)
T ss_pred eeecchhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcc
Confidence 99999999999999999999999764321 223345678999999999999999999999999999998876544
Q ss_pred eeccCCeEEEEecCC-CEEEEEeCCCeEEEEEcCCCcceEEEe-cCC-CcEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q 010754 354 EFHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFA-GHQ-GEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD 430 (502)
Q Consensus 354 ~~~~~~v~~v~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~-~h~-~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~ 430 (502)
..|.+.|+++.+++. ..+++++.||.|++||--+++++.++. +|. ..|.+..|..+|+|+++.+.|..+++|.+.++
T Consensus 258 ~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~ 337 (430)
T KOG0640|consen 258 DQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTG 337 (430)
T ss_pred cccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCC
Confidence 347889999999765 558899999999999999999998884 454 46999999999999999999999999999887
Q ss_pred eeEEEe-------------------------------------------------ccCCCcEEEEEEccCCCCCCCCCcc
Q 010754 431 KYVHDL-------------------------------------------------REHSKEIYTIRWSPTGSGTNNPNQQ 461 (502)
Q Consensus 431 ~~~~~~-------------------------------------------------~~h~~~i~~v~~sp~g~~~~~~~~~ 461 (502)
+++..+ .+|++.+..+.-||.++ .
T Consensus 338 R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p-------~ 410 (430)
T KOG0640|consen 338 RMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEP-------A 410 (430)
T ss_pred ceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCCC-------c
Confidence 654333 25677777788888777 6
Q ss_pred EEEEeecCceEEEEe
Q 010754 462 LILARLIPYFLYWIC 476 (502)
Q Consensus 462 l~las~~~~~~iw~~ 476 (502)
+++++.|...++|--
T Consensus 411 FmTcsdD~raRFWyr 425 (430)
T KOG0640|consen 411 FMTCSDDFRARFWYR 425 (430)
T ss_pred eeeecccceeeeeee
Confidence 788888888888853
No 45
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=1.1e-28 Score=237.54 Aligned_cols=243 Identities=21% Similarity=0.361 Sum_probs=213.0
Q ss_pred EEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCE
Q 010754 209 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 288 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~ 288 (502)
..+......|+|++|++..++||+|-..|...+|.+++-.++.. + .-....|..++|+..|..
T Consensus 259 ~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~lih~-------------L----Sis~~~I~t~~~N~tGDW 321 (893)
T KOG0291|consen 259 HYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHS-------------L----SISDQKILTVSFNSTGDW 321 (893)
T ss_pred eeecccccceeeeeccCCceEEEEEecCCeeEEEecCCceEEEE-------------e----ecccceeeEEEecccCCE
Confidence 34444557899999999999999999999999999987653221 1 111356999999999999
Q ss_pred EEEEECC-CeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEec
Q 010754 289 LATGSYD-GQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 366 (502)
Q Consensus 289 l~s~~~d-g~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~ 366 (502)
||.|+.. |.+-||+... ..+....+|...+.+++++|||++++||+.||.|+|||..++-|..+|..|...|+.+.|.
T Consensus 322 iA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~ 401 (893)
T KOG0291|consen 322 IAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFT 401 (893)
T ss_pred EEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEE
Confidence 9999865 8999999764 5566778999999999999999999999999999999999999999999999999999996
Q ss_pred C-CCEEEEEeCCCeEEEEEcCCCcceEEEecCC-CcEEEEEEcCCCCEEEEEeCCC-cEEEEECCCCeeEEEeccCCCcE
Q 010754 367 N-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQ-GEVNCVKWDPTGSLLASCSDDV-TAKIWNMKQDKYVHDLREHSKEI 443 (502)
Q Consensus 367 ~-~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~-~~i~~l~~sp~g~~las~s~dg-~i~iwd~~~~~~~~~~~~h~~~i 443 (502)
. +..+++.+.||+|+.||+...+..++|.... -...|++.+|.|.++++|+.|. .|+||++.+|+++-.+.||.+||
T Consensus 402 ~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPV 481 (893)
T KOG0291|consen 402 ARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPV 481 (893)
T ss_pred ecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcc
Confidence 5 5568899999999999999999999997654 3577899999999999999885 59999999999999999999999
Q ss_pred EEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 444 YTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 444 ~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
.+++|+|+|+ .|..+|.|.++++|+
T Consensus 482 s~l~f~~~~~-------~LaS~SWDkTVRiW~ 506 (893)
T KOG0291|consen 482 SGLSFSPDGS-------LLASGSWDKTVRIWD 506 (893)
T ss_pred eeeEEccccC-------eEEeccccceEEEEE
Confidence 9999999999 788888899999995
No 46
>PTZ00421 coronin; Provisional
Probab=99.97 E-value=2.4e-28 Score=242.10 Aligned_cols=235 Identities=19% Similarity=0.234 Sum_probs=187.6
Q ss_pred EEeccCCCceEEEEEcC-CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC-
Q 010754 209 TILEGHTSEVCACAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG- 286 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p-~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g- 286 (502)
..+.||.+.|++++|+| ++++|++|+.|++|++||+.++...... ........+|...|.+++|+|++
T Consensus 69 ~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~----------~~~l~~L~gH~~~V~~l~f~P~~~ 138 (493)
T PTZ00421 69 PILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNI----------SDPIVHLQGHTKKVGIVSFHPSAM 138 (493)
T ss_pred ceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCcccccc----------CcceEEecCCCCcEEEEEeCcCCC
Confidence 45789999999999999 7899999999999999999865321100 00112234678899999999975
Q ss_pred CEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCC-eEEEE
Q 010754 287 TLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP-TLDVD 364 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~-v~~v~ 364 (502)
++|++|+.|+.|+|||++ +.....+..|...|.+++|+|+|++|++++.|++|++||+++++.+..+..|.+. +..+.
T Consensus 139 ~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~ 218 (493)
T PTZ00421 139 NVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCL 218 (493)
T ss_pred CEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEE
Confidence 699999999999999987 4566678889999999999999999999999999999999999999888888765 34567
Q ss_pred ecCC-CEEEEEe----CCCeEEEEEcCCCc-ceEEEecC-CCcEEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeeEEEe
Q 010754 365 WRNN-VSFATSS----TDNMIYVCKIGENR-PIKTFAGH-QGEVNCVKWDPTGSLLASCS-DDVTAKIWNMKQDKYVHDL 436 (502)
Q Consensus 365 ~~~~-~~~~~~~----~d~~i~i~d~~~~~-~~~~~~~h-~~~i~~l~~sp~g~~las~s-~dg~i~iwd~~~~~~~~~~ 436 (502)
|.++ ..+++++ .|+.|++||+++.. ++.....+ ...+....|++++++|++|+ .||.|++||+.+++++...
T Consensus 219 w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~ 298 (493)
T PTZ00421 219 WAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCS 298 (493)
T ss_pred EcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEe
Confidence 7654 4555544 47899999998754 44444433 34566678999999999887 5999999999999887765
Q ss_pred c-cCCCcEEEEEEccCCC
Q 010754 437 R-EHSKEIYTIRWSPTGS 453 (502)
Q Consensus 437 ~-~h~~~i~~v~~sp~g~ 453 (502)
. .+..++..++|.|.-.
T Consensus 299 ~~~s~~~~~g~~~~pk~~ 316 (493)
T PTZ00421 299 SYSSVEPHKGLCMMPKWS 316 (493)
T ss_pred eccCCCCCcceEeccccc
Confidence 4 3556788999999754
No 47
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.97 E-value=3.1e-30 Score=217.64 Aligned_cols=246 Identities=18% Similarity=0.290 Sum_probs=218.7
Q ss_pred eEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC
Q 010754 208 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~ 287 (502)
+-++.||++.|+.++++.+-.+.|+++.|-+.+|||.-++..+.. ..|..-|.+++|+.|.+
T Consensus 52 igtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhs------------------f~hkhivk~~af~~ds~ 113 (334)
T KOG0278|consen 52 IGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHS------------------FEHKHIVKAVAFSQDSN 113 (334)
T ss_pred EEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhh------------------hhhhheeeeEEecccch
Confidence 678999999999999999988999999999999999888764322 23455699999999999
Q ss_pred EEEEEECCCeEEEEECCC--ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEe
Q 010754 288 LLATGSYDGQARIWSTNG--DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW 365 (502)
Q Consensus 288 ~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~ 365 (502)
+|++|+.+..+||||++. .....+.+|.+.|..+-|....+.|++++.|++|++||.+++..++++. ...+|.++..
T Consensus 114 ~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~-~~s~VtSlEv 192 (334)
T KOG0278|consen 114 YLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLE-FNSPVTSLEV 192 (334)
T ss_pred hhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEe-cCCCCcceee
Confidence 999999999999999874 4566788999999999999999999999999999999999999999887 4568999999
Q ss_pred cCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEe-ccCCCcEE
Q 010754 366 RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDL-REHSKEIY 444 (502)
Q Consensus 366 ~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~-~~h~~~i~ 444 (502)
++++.+++....+.|.+||..+-..++.+. -...|.+..++|+...+++|++|+.++.||..++..+..+ ++|.++|.
T Consensus 193 s~dG~ilTia~gssV~Fwdaksf~~lKs~k-~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVh 271 (334)
T KOG0278|consen 193 SQDGRILTIAYGSSVKFWDAKSFGLLKSYK-MPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVH 271 (334)
T ss_pred ccCCCEEEEecCceeEEeccccccceeecc-CccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceE
Confidence 999999999999999999999999888887 4467999999999999999999999999999999998886 89999999
Q ss_pred EEEEccCCCCCCCCCccEEEEeecCceEEEEeeeEE
Q 010754 445 TIRWSPTGSGTNNPNQQLILARLIPYFLYWICSIYF 480 (502)
Q Consensus 445 ~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~~~ 480 (502)
++.|+|+|. ....+|.||++++|......
T Consensus 272 cVrFSPdGE-------~yAsGSEDGTirlWQt~~~~ 300 (334)
T KOG0278|consen 272 CVRFSPDGE-------LYASGSEDGTIRLWQTTPGK 300 (334)
T ss_pred EEEECCCCc-------eeeccCCCceEEEEEecCCC
Confidence 999999998 55667778999999865543
No 48
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=1.9e-28 Score=235.75 Aligned_cols=259 Identities=22% Similarity=0.314 Sum_probs=221.6
Q ss_pred EEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCC---------------------ceeEEEe--e
Q 010754 209 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGP---------------------LNVLVLK--H 265 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~---------------------~~~~~~~--~ 265 (502)
..+.||...|.+++++.+...+++|+. +.++||+..+.+++.++...- +.++.+. .
T Consensus 367 i~~~GHR~dVRsl~vS~d~~~~~Sga~-~SikiWn~~t~kciRTi~~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~ 445 (888)
T KOG0306|consen 367 IEIGGHRSDVRSLCVSSDSILLASGAG-ESIKIWNRDTLKCIRTITCGYILASKFVPGDRYIVLGTKNGELQVFDLASAS 445 (888)
T ss_pred eeeccchhheeEEEeecCceeeeecCC-CcEEEEEccCcceeEEeccccEEEEEecCCCceEEEeccCCceEEEEeehhh
Confidence 456799999999999998888888866 789999999888776654331 1111110 1
Q ss_pred ecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECC------CceEE-------EecCccCCeEEEEEecCCCEEEE
Q 010754 266 VKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN------GDLKC-------TLSKHKGPIFSLKWNKKGDYLLT 332 (502)
Q Consensus 266 ~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~------~~~~~-------~~~~~~~~v~~l~~~~~~~~l~s 332 (502)
+......|.+.|.+++.+||++.+++|+.|.+|++||.. +.... ....-...|.|+.+||+|++|++
T Consensus 446 l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaV 525 (888)
T KOG0306|consen 446 LVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAV 525 (888)
T ss_pred hhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEE
Confidence 122334789999999999999999999999999999953 21111 11124567999999999999999
Q ss_pred EecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCC-EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCC
Q 010754 333 GSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS 411 (502)
Q Consensus 333 ~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~ 411 (502)
+-.|++|++|-+.+.+....+.+|.-||.+++.+++. .++||+.|..|++|-+.-|.+-+.|.+|.+.|.++.|-|...
T Consensus 526 sLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~ 605 (888)
T KOG0306|consen 526 SLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTH 605 (888)
T ss_pred EeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEcccce
Confidence 9999999999999999999999999999999998765 588999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 412 LLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 412 ~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
++.+|+.|+.|+-||..+.+++..+.+|...|++++.+|+|+ .++++|-|..+++|-
T Consensus 606 ~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~-------~vvs~shD~sIRlwE 662 (888)
T KOG0306|consen 606 LFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGS-------FVVSSSHDKSIRLWE 662 (888)
T ss_pred eEEEecCcceEEeechhhhhhheeeccchheeeeeEEcCCCC-------eEEeccCCceeEeee
Confidence 999999999999999999999999999999999999999998 778888889999994
No 49
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.97 E-value=9.5e-29 Score=210.04 Aligned_cols=238 Identities=23% Similarity=0.422 Sum_probs=200.4
Q ss_pred EEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC-CCC
Q 010754 209 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EGT 287 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~-~g~ 287 (502)
+.+++|...|.+++|+.+|..|++|+.|+++++|++...... ......+|...|-.++|+| ...
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~---------------~~~~~~gh~~svdql~w~~~~~d 78 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFR---------------KELVYRGHTDSVDQLCWDPKHPD 78 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhh---------------hhhcccCCCcchhhheeCCCCCc
Confidence 567899999999999999999999999999999999876422 1223346777899999988 567
Q ss_pred EEEEEECCCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEe-
Q 010754 288 LLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW- 365 (502)
Q Consensus 288 ~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~- 365 (502)
.+++++.|..|++||.+. ++...... ++.-.-+.|+|+|.++++++.|..|.+.|.++.+.+..... .-.+..++|
T Consensus 79 ~~atas~dk~ir~wd~r~~k~~~~i~~-~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~-~~e~ne~~w~ 156 (313)
T KOG1407|consen 79 LFATASGDKTIRIWDIRSGKCTARIET-KGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQF-KFEVNEISWN 156 (313)
T ss_pred ceEEecCCceEEEEEeccCcEEEEeec-cCcceEEEEcCCCCEEEEecCcccEEEEEecccceeehhcc-cceeeeeeec
Confidence 999999999999999764 44444443 34445689999999999999999999999999887776553 334667777
Q ss_pred cCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEE
Q 010754 366 RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYT 445 (502)
Q Consensus 366 ~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~ 445 (502)
.+++.|+....-|+|.|.....-+++.++.+|.....||.|+|+|++||+|+.|..+.+||+..--|++.+.-+.=||..
T Consensus 157 ~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRT 236 (313)
T KOG1407|consen 157 NSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRT 236 (313)
T ss_pred CCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEE
Confidence 45667777777899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCCCCCCCCccEEEEeecCceE
Q 010754 446 IRWSPTGSGTNNPNQQLILARLIPYFL 472 (502)
Q Consensus 446 v~~sp~g~~~~~~~~~l~las~~~~~~ 472 (502)
+.||.||+ ++||++.+..
T Consensus 237 lSFS~dg~---------~lASaSEDh~ 254 (313)
T KOG1407|consen 237 LSFSHDGR---------MLASASEDHF 254 (313)
T ss_pred EEeccCcc---------eeeccCccce
Confidence 99999999 6666665543
No 50
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=7.1e-29 Score=242.90 Aligned_cols=259 Identities=15% Similarity=0.289 Sum_probs=204.4
Q ss_pred EEec-cCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccC---------------------------C--------
Q 010754 209 TILE-GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNG---------------------------G-------- 252 (502)
Q Consensus 209 ~~l~-~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~---------------------------~-------- 252 (502)
+-+. +|.+.|+++.|++||++||+||.|+.|+||.+....... .
T Consensus 260 Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~ 339 (712)
T KOG0283|consen 260 QEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS 339 (712)
T ss_pred eccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence 3445 899999999999999999999999999999987611000 0
Q ss_pred ---CCCCC--ce---eEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEe
Q 010754 253 ---AQNGP--LN---VLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWN 324 (502)
Q Consensus 253 ---~~~~~--~~---~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~ 324 (502)
..... ++ ......+...+.+|..+|..|.||.+ ++|++++.|.+|++|++..+.......|..-|+|++|+
T Consensus 340 ~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcVaFn 418 (712)
T KOG0283|consen 340 RKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCVAFN 418 (712)
T ss_pred ccccCCccccCCCccccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCcceeeEEecCCeeEEEEec
Confidence 00000 00 00011123445689999999999976 58999999999999999877777777899999999999
Q ss_pred c-CCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCE-EEEEeCCCeEEEEEcCCCcceEEEecC-----
Q 010754 325 K-KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGH----- 397 (502)
Q Consensus 325 ~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~h----- 397 (502)
| |.+||++|+.||.|+||++...+.+.-...+ .-|++++|.|++. .++|+.+|.+++|+....+....+..+
T Consensus 419 PvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~-~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~K 497 (712)
T KOG0283|consen 419 PVDDRYFISGSLDGKVRLWSISDKKVVDWNDLR-DLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKK 497 (712)
T ss_pred ccCCCcEeecccccceEEeecCcCeeEeehhhh-hhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCc
Confidence 9 6799999999999999999887766655544 7899999988766 678899999999999988766554321
Q ss_pred ---CCcEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCeeEEEeccCCC--cEEEEEEccCCCCCCCCCccEEEEeecCce
Q 010754 398 ---QGEVNCVKWDPTGS-LLASCSDDVTAKIWNMKQDKYVHDLREHSK--EIYTIRWSPTGSGTNNPNQQLILARLIPYF 471 (502)
Q Consensus 398 ---~~~i~~l~~sp~g~-~las~s~dg~i~iwd~~~~~~~~~~~~h~~--~i~~v~~sp~g~~~~~~~~~l~las~~~~~ 471 (502)
...|+++.|.|... .|+..+.|..|||+|.+...+++.|+++.. .=....|+.||. .|+.|+-|..+
T Consensus 498 k~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk-------~IVs~seDs~V 570 (712)
T KOG0283|consen 498 KKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGK-------HIVSASEDSWV 570 (712)
T ss_pred cccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCC-------EEEEeecCceE
Confidence 22799999998543 577778899999999999999999986532 345778999998 89999988999
Q ss_pred EEEEe
Q 010754 472 LYWIC 476 (502)
Q Consensus 472 ~iw~~ 476 (502)
.+|..
T Consensus 571 YiW~~ 575 (712)
T KOG0283|consen 571 YIWKN 575 (712)
T ss_pred EEEeC
Confidence 99975
No 51
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.97 E-value=1.3e-28 Score=227.37 Aligned_cols=218 Identities=23% Similarity=0.342 Sum_probs=176.9
Q ss_pred eeeCCCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEE
Q 010754 201 FEIPNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTL 280 (502)
Q Consensus 201 ~~~~~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l 280 (502)
..||...-..|++|+..|.++++.|.|.+|++||.|.+|++||+...... ++.+..........|.++
T Consensus 153 ~~IP~shEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas------------~~~fr~l~P~E~h~i~sl 220 (641)
T KOG0772|consen 153 KLIPGSHEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDAS------------MRSFRQLQPCETHQINSL 220 (641)
T ss_pred hcCCccceEeccCCceEEEEeeecCCCceeeeccccceEEEEeccccccc------------chhhhccCccccccccee
Confidence 35778888899999999999999999999999999999999999875421 122333334446679999
Q ss_pred EECCCCCEEEEEECCCeEEEEECCCceEE-------------EecCccCCeEEEEEecCC-CEEEEEecCCeEEEEEcCC
Q 010754 281 DWNGEGTLLATGSYDGQARIWSTNGDLKC-------------TLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKT 346 (502)
Q Consensus 281 ~~s~~g~~l~s~~~dg~i~iwd~~~~~~~-------------~~~~~~~~v~~l~~~~~~-~~l~s~~~d~~i~~wd~~~ 346 (502)
+|++.|..|++.+....++|+|.+|..+. ...+|...++|.+|+|.. ..|++++.||++++||+..
T Consensus 221 ~ys~Tg~~iLvvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~ 300 (641)
T KOG0772|consen 221 QYSVTGDQILVVSGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNN 300 (641)
T ss_pred eecCCCCeEEEEecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCC
Confidence 99999999999999999999998876543 345799999999999965 6899999999999999965
Q ss_pred Cc-eEEEEee-----ccCCeEEEEecCCC-EEEEEeCCCeEEEEEcCCCc--c-eEEEecCCC--cEEEEEEcCCCCEEE
Q 010754 347 EE-WKQQFEF-----HSGPTLDVDWRNNV-SFATSSTDNMIYVCKIGENR--P-IKTFAGHQG--EVNCVKWDPTGSLLA 414 (502)
Q Consensus 347 ~~-~~~~~~~-----~~~~v~~v~~~~~~-~~~~~~~d~~i~i~d~~~~~--~-~~~~~~h~~--~i~~l~~sp~g~~la 414 (502)
.+ .++.+.. ..-+++.+.|++++ .|++|+.||.|.+|+.++.. + ...-.+|.. .|+||.||++|++|+
T Consensus 301 ~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~Ll 380 (641)
T KOG0772|consen 301 TKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLL 380 (641)
T ss_pred chhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhh
Confidence 43 3333332 23468899997765 48889999999999986543 2 334457876 899999999999999
Q ss_pred EEeCCCcEEEEECCCC
Q 010754 415 SCSDDVTAKIWNMKQD 430 (502)
Q Consensus 415 s~s~dg~i~iwd~~~~ 430 (502)
|-+.|+++++||++..
T Consensus 381 SRg~D~tLKvWDLrq~ 396 (641)
T KOG0772|consen 381 SRGFDDTLKVWDLRQF 396 (641)
T ss_pred hccCCCceeeeecccc
Confidence 9999999999999753
No 52
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.97 E-value=5.2e-28 Score=206.19 Aligned_cols=243 Identities=19% Similarity=0.299 Sum_probs=203.4
Q ss_pred EEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCE
Q 010754 209 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 288 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~ 288 (502)
..|+||..+++-+.++.+|.+|++++.|.++.+|-..+++. .+...+|.+.|+|++.+.+.++
T Consensus 4 i~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGer-----------------lGty~GHtGavW~~Did~~s~~ 66 (327)
T KOG0643|consen 4 ILLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGER-----------------LGTYDGHTGAVWCCDIDWDSKH 66 (327)
T ss_pred cccccCccccceEEecCCCcEEEEecCCCCceEEEecCCce-----------------eeeecCCCceEEEEEecCCcce
Confidence 35789999999999999999999999999999998877663 3455678899999999999999
Q ss_pred EEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEec-----CCeEEEEEcC-------CCceEEEEeec
Q 010754 289 LATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSC-----DKTAIVWDVK-------TEEWKQQFEFH 356 (502)
Q Consensus 289 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~-----d~~i~~wd~~-------~~~~~~~~~~~ 356 (502)
+++|+.|.++++||+........-....+|..+.|+++|++++.+.. .+.|.++|++ ...+...+..+
T Consensus 67 liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~ 146 (327)
T KOG0643|consen 67 LITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTP 146 (327)
T ss_pred eeeccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCC
Confidence 99999999999999886655555567789999999999998887654 4679999998 45567778888
Q ss_pred cCCeEEEEecC-CCEEEEEeCCCeEEEEEcCCCc-ceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCee--
Q 010754 357 SGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENR-PIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY-- 432 (502)
Q Consensus 357 ~~~v~~v~~~~-~~~~~~~~~d~~i~i~d~~~~~-~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~-- 432 (502)
...++.+-|.+ +..+++|..||.|.+||++++. .+..-..|...|+.|+++|+..+++++|.|.+-++||+.+-.+
T Consensus 147 ~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~K 226 (327)
T KOG0643|consen 147 DSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLK 226 (327)
T ss_pred ccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEE
Confidence 88999999977 4568889999999999999984 5666678999999999999999999999999999999865322
Q ss_pred -----------------------------------------------------EEEeccCCCcEEEEEEccCCCCCCCCC
Q 010754 433 -----------------------------------------------------VHDLREHSKEIYTIRWSPTGSGTNNPN 459 (502)
Q Consensus 433 -----------------------------------------------------~~~~~~h~~~i~~v~~sp~g~~~~~~~ 459 (502)
+..+++|-+||++|+|||+|.
T Consensus 227 ty~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGk------ 300 (327)
T KOG0643|consen 227 TYTTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGK------ 300 (327)
T ss_pred EeeecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCc------
Confidence 334578999999999999998
Q ss_pred ccEEEEeecCceEEEE
Q 010754 460 QQLILARLIPYFLYWI 475 (502)
Q Consensus 460 ~~l~las~~~~~~iw~ 475 (502)
-...++.|+.+++..
T Consensus 301 -sYsSGGEDG~VR~h~ 315 (327)
T KOG0643|consen 301 -SYSSGGEDGYVRLHH 315 (327)
T ss_pred -ccccCCCCceEEEEE
Confidence 334444556666653
No 53
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.97 E-value=9.8e-29 Score=225.60 Aligned_cols=262 Identities=23% Similarity=0.339 Sum_probs=214.0
Q ss_pred eEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEee--ecCccccCCCCeEEEEECCC
Q 010754 208 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKH--VKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~l~~s~~ 285 (502)
++.+..|.-+|.||+++|+.++.++++.||+|.-|++.+++....+-..+ .+..... +......|...+.+++.++|
T Consensus 135 ~~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~-ev~k~~~~~~k~~r~~h~keil~~avS~D 213 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERD-EVLKSHGNPLKESRKGHVKEILTLAVSSD 213 (479)
T ss_pred ceeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccc-hhhhhccCCCCcccccccceeEEEEEcCC
Confidence 67888999999999999999999999999999999999887442111110 0000000 11111377889999999999
Q ss_pred CCEEEEEECCCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEE
Q 010754 286 GTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD 364 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~ 364 (502)
|++|++|+.|..|.||+.+. ..+..+.+|.+.|.+++|-...+.+++++.|++|++|++.....+.++.+|.+.|..|+
T Consensus 214 gkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~Id 293 (479)
T KOG0299|consen 214 GKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGID 293 (479)
T ss_pred CcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeec
Confidence 99999999999999999874 56667899999999999998889999999999999999999999999999999999999
Q ss_pred ecCCCEEEEEe-CCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEec-cCC--
Q 010754 365 WRNNVSFATSS-TDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR-EHS-- 440 (502)
Q Consensus 365 ~~~~~~~~~~~-~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~-~h~-- 440 (502)
-....+.++.+ .|+++++|++... ....|.+|.+.+-|++|-. ...+++||++|.|.+|++.+.+++.+.+ +|.
T Consensus 294 aL~reR~vtVGgrDrT~rlwKi~ee-sqlifrg~~~sidcv~~In-~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~ 371 (479)
T KOG0299|consen 294 ALSRERCVTVGGRDRTVRLWKIPEE-SQLIFRGGEGSIDCVAFIN-DEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVI 371 (479)
T ss_pred hhcccceEEeccccceeEEEecccc-ceeeeeCCCCCeeeEEEec-ccceeeccCCceEEEeeecccCceeEeecccccc
Confidence 97777766554 9999999999544 4457888999999999984 4578899999999999999999887665 332
Q ss_pred ---------CcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEeeeE
Q 010754 441 ---------KEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICSIY 479 (502)
Q Consensus 441 ---------~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~~ 479 (502)
..|++++..|... .+.++|.++.+++|.+.-.
T Consensus 372 ~~~~~~~~~~Witsla~i~~sd-------L~asGS~~G~vrLW~i~~g 412 (479)
T KOG0299|consen 372 PELDPVNGNFWITSLAVIPGSD-------LLASGSWSGCVRLWKIEDG 412 (479)
T ss_pred CCccccccccceeeeEecccCc-------eEEecCCCCceEEEEecCC
Confidence 2688999998876 6667777799999975544
No 54
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.97 E-value=1.1e-27 Score=221.87 Aligned_cols=244 Identities=24% Similarity=0.357 Sum_probs=211.5
Q ss_pred CceEEeccCCCceEEEEEcCC-CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC
Q 010754 206 SDVTILEGHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 284 (502)
Q Consensus 206 ~~~~~l~~H~~~V~~~~~~p~-~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~ 284 (502)
..+-.+.||...|.+|+|-|. .-+++||+.|++|.+|+=..- .+......|...|.|+.|+|
T Consensus 138 ~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPF-----------------KFk~s~r~HskFV~~VRysP 200 (603)
T KOG0318|consen 138 NSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPF-----------------KFKSSFREHSKFVNCVRYSP 200 (603)
T ss_pred CccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCe-----------------eeeecccccccceeeEEECC
Confidence 345678899999999999996 458999999999999974322 13445566788999999999
Q ss_pred CCCEEEEEECCCeEEEEE-CCCceEEEec---CccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeecc---
Q 010754 285 EGTLLATGSYDGQARIWS-TNGDLKCTLS---KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS--- 357 (502)
Q Consensus 285 ~g~~l~s~~~dg~i~iwd-~~~~~~~~~~---~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~--- 357 (502)
||.++++++.||.|.+|| ..+..+..+. +|++.|+++.|+||+..|++++.|.+++|||+.+.++++++....
T Consensus 201 DG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~ 280 (603)
T KOG0318|consen 201 DGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVE 280 (603)
T ss_pred CCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchh
Confidence 999999999999999999 4567777776 899999999999999999999999999999999999999887543
Q ss_pred CCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEe-
Q 010754 358 GPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDL- 436 (502)
Q Consensus 358 ~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~- 436 (502)
.....+.|. +..+++.+.+|.|.+++.....+++++.||...|+++..+|++++|++|+.||.|.-|+..++..-+..
T Consensus 281 dqqvG~lWq-kd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g 359 (603)
T KOG0318|consen 281 DQQVGCLWQ-KDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAG 359 (603)
T ss_pred ceEEEEEEe-CCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCcccccccc
Confidence 355667787 777999999999999999999999999999999999999999999999999999999999998875444
Q ss_pred ccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 437 REHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 437 ~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
++|+..|.+++-+..+. +++.+.|..+++-.
T Consensus 360 ~~h~nqI~~~~~~~~~~--------~~t~g~Dd~l~~~~ 390 (603)
T KOG0318|consen 360 KGHTNQIKGMAASESGE--------LFTIGWDDTLRVIS 390 (603)
T ss_pred ccccceEEEEeecCCCc--------EEEEecCCeEEEEe
Confidence 57999999999888665 67788888777653
No 55
>PTZ00420 coronin; Provisional
Probab=99.97 E-value=1.9e-27 Score=236.54 Aligned_cols=236 Identities=19% Similarity=0.326 Sum_probs=179.8
Q ss_pred ceEEeccCCCceEEEEEcCC-CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC
Q 010754 207 DVTILEGHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~-~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~ 285 (502)
.+..+.+|.+.|.+++|+|+ +.+||+|+.|++|+||++.++...... .........+|...|.+++|+|+
T Consensus 66 ~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~---------i~~p~~~L~gH~~~V~sVaf~P~ 136 (568)
T PTZ00420 66 PVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKE---------IKDPQCILKGHKKKISIIDWNPM 136 (568)
T ss_pred eEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccc---------cccceEEeecCCCcEEEEEECCC
Confidence 56789999999999999996 789999999999999999864311000 00011123456788999999998
Q ss_pred CCE-EEEEECCCeEEEEECCCce-EEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEE
Q 010754 286 GTL-LATGSYDGQARIWSTNGDL-KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDV 363 (502)
Q Consensus 286 g~~-l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v 363 (502)
+.. |++|+.||.|+|||++... ...+ .|...|.+++|+|+|.+|++++.|+.|++||+++++.+..+.+|.+.+...
T Consensus 137 g~~iLaSgS~DgtIrIWDl~tg~~~~~i-~~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~ 215 (568)
T PTZ00420 137 NYYIMCSSGFDSFVNIWDIENEKRAFQI-NMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTK 215 (568)
T ss_pred CCeEEEEEeCCCeEEEEECCCCcEEEEE-ecCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeE
Confidence 875 5789999999999987543 3344 366789999999999999999999999999999999999999998765433
Q ss_pred E-----ecC-CCEEEEEeCCC----eEEEEEcCC-CcceEEEecC--CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q 010754 364 D-----WRN-NVSFATSSTDN----MIYVCKIGE-NRPIKTFAGH--QGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD 430 (502)
Q Consensus 364 ~-----~~~-~~~~~~~~~d~----~i~i~d~~~-~~~~~~~~~h--~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~ 430 (502)
. |++ +..+++++.++ .|++||++. ..++..+..+ .+.+......++|.++++|+.|++|++|++..+
T Consensus 216 ~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~ 295 (568)
T PTZ00420 216 NIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLG 295 (568)
T ss_pred EEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCC
Confidence 2 223 45678877664 799999995 5677665433 233333444556899999999999999999876
Q ss_pred eeEEEec--cCCCcEEEEEEccCCC
Q 010754 431 KYVHDLR--EHSKEIYTIRWSPTGS 453 (502)
Q Consensus 431 ~~~~~~~--~h~~~i~~v~~sp~g~ 453 (502)
. ++.+. .+..++.+++|.|...
T Consensus 296 ~-~~~l~~~~s~~p~~g~~f~Pkr~ 319 (568)
T PTZ00420 296 S-IRKVNEYKSCSPFRSFGFLPKQI 319 (568)
T ss_pred c-EEeecccccCCCccceEEccccc
Confidence 4 33333 3667899999999864
No 56
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.97 E-value=5.3e-30 Score=230.68 Aligned_cols=251 Identities=23% Similarity=0.416 Sum_probs=193.6
Q ss_pred eeCCCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEE
Q 010754 202 EIPNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLD 281 (502)
Q Consensus 202 ~~~~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~ 281 (502)
.+|......+..|.+.|..+.|-++...|++|+.|..|++|++...+.. +.....+..+.|+.+.
T Consensus 162 ~lpS~~~~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~---------------~~~tLaGs~g~it~~d 226 (459)
T KOG0288|consen 162 TLPSRALFVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSE---------------LISTLAGSLGNITSID 226 (459)
T ss_pred ccchhhhhhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhh---------------hhhhhhccCCCcceee
Confidence 3677777889999999999999999899999999999999998766521 2233344467899999
Q ss_pred ECCCCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeecc---
Q 010754 282 WNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS--- 357 (502)
Q Consensus 282 ~s~~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~--- 357 (502)
|.++++++++++.|+.+++|+++ .....++.+|...|+++.|......+++|+.|.+|++||+....+.+++....
T Consensus 227 ~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~cn 306 (459)
T KOG0288|consen 227 FDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQCN 306 (459)
T ss_pred ecCCCceEEeecCCCceeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheecccccccccc
Confidence 99999999999999999999987 46778899999999999998877668899999999999887766655433211
Q ss_pred -----------------------------------CCeEEEEecCCC-EEEEEeCCCeEEEEEcCCCcceEEEecC----
Q 010754 358 -----------------------------------GPTLDVDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFAGH---- 397 (502)
Q Consensus 358 -----------------------------------~~v~~v~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~h---- 397 (502)
+.|+++..+.++ .+++++.|.++.+.|+++......+.+.
T Consensus 307 DI~~~~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~ 386 (459)
T KOG0288|consen 307 DIVCSISDVISGHFDKKVRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKC 386 (459)
T ss_pred ceEecceeeeecccccceEEEeccCCceeeEeecCcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeecccccc
Confidence 123333332222 2444455555555555554444444322
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCc--EEEEEEccCCCCCCCCCccEEEEeecCceEEE
Q 010754 398 QGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKE--IYTIRWSPTGSGTNNPNQQLILARLIPYFLYW 474 (502)
Q Consensus 398 ~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~--i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw 474 (502)
....+.+.|||++.|+|+||.||.|+||++.++++...++..+.+ |++++|+|.|+ .++.++-++.+++|
T Consensus 387 asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~-------~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 387 ASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGS-------GLLSADKQKAVTLW 458 (459)
T ss_pred ccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCc-------hhhcccCCcceEec
Confidence 134778999999999999999999999999999999998865554 99999999999 66777777888888
No 57
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=3.5e-28 Score=232.20 Aligned_cols=239 Identities=24% Similarity=0.431 Sum_probs=209.4
Q ss_pred ccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEE
Q 010754 212 EGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLAT 291 (502)
Q Consensus 212 ~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s 291 (502)
..+...|+++.|+++|.+||+|..+|.|.|||..+.+.+..+.. .|...|.+++|+ +..+.+
T Consensus 214 ~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~----------------~h~~rvg~laW~--~~~lss 275 (484)
T KOG0305|consen 214 SFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRG----------------SHASRVGSLAWN--SSVLSS 275 (484)
T ss_pred ecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccC----------------CcCceeEEEecc--CceEEE
Confidence 34489999999999999999999999999999987664332211 167889999998 678999
Q ss_pred EECCCeEEEEECCC--ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecC--
Q 010754 292 GSYDGQARIWSTNG--DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-- 367 (502)
Q Consensus 292 ~~~dg~i~iwd~~~--~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~-- 367 (502)
|+.||.|..+|++. .....+.+|...|..++|++++.++++|+.|+.+.|||.....++..+..|...|.+++|+|
T Consensus 276 Gsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q 355 (484)
T KOG0305|consen 276 GSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQ 355 (484)
T ss_pred ecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCc
Confidence 99999999999763 22234788999999999999999999999999999999988899999999999999999987
Q ss_pred CCEEEEEe--CCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEe--CCCcEEEEECCCCeeEEEeccCCCcE
Q 010754 368 NVSFATSS--TDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS--DDVTAKIWNMKQDKYVHDLREHSKEI 443 (502)
Q Consensus 368 ~~~~~~~~--~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s--~dg~i~iwd~~~~~~~~~~~~h~~~i 443 (502)
.+.||+|+ .|++|++||..++..+.... ..+.|+.|.|++..+-|+++. .++.|.||+..+.+.+..+.+|...|
T Consensus 356 ~~lLAsGGGs~D~~i~fwn~~~g~~i~~vd-tgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RV 434 (484)
T KOG0305|consen 356 SGLLATGGGSADRCIKFWNTNTGARIDSVD-TGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRV 434 (484)
T ss_pred cCceEEcCCCcccEEEEEEcCCCcEecccc-cCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCccee
Confidence 45688764 69999999999999888776 567899999999987776654 46789999999999999999999999
Q ss_pred EEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 444 YTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 444 ~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
..++|||||. .+++|++|.++++|.+
T Consensus 435 l~la~SPdg~-------~i~t~a~DETlrfw~~ 460 (484)
T KOG0305|consen 435 LYLALSPDGE-------TIVTGAADETLRFWNL 460 (484)
T ss_pred EEEEECCCCC-------EEEEecccCcEEeccc
Confidence 9999999998 8999999999999985
No 58
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.96 E-value=5.1e-30 Score=223.89 Aligned_cols=255 Identities=19% Similarity=0.331 Sum_probs=210.2
Q ss_pred CCCceEEec-cCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEE
Q 010754 204 PNSDVTILE-GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW 282 (502)
Q Consensus 204 ~~~~~~~l~-~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~ 282 (502)
|....+.++ |.++.+-|..|+|||++|++|+.||.|.+|+..+++....+.... ...+--+..+|.|++|
T Consensus 201 Pt~l~r~IKFg~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQA---------qd~fMMmd~aVlci~F 271 (508)
T KOG0275|consen 201 PTQLARSIKFGQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQA---------QDNFMMMDDAVLCISF 271 (508)
T ss_pred hHHhhhheecccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhh---------hcceeecccceEEEee
Confidence 333334443 566778999999999999999999999999999988654332211 1122234678999999
Q ss_pred CCCCCEEEEEECCCeEEEEECC-CceEEEec-CccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCe
Q 010754 283 NGEGTLLATGSYDGQARIWSTN-GDLKCTLS-KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT 360 (502)
Q Consensus 283 s~~g~~l~s~~~dg~i~iwd~~-~~~~~~~~-~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v 360 (502)
+.|..++|+|+.||.|++|.+. +.++..+. .|...|+|+.|+.++..+++++.|.++++.-+.+|++++.|.+|.+-|
T Consensus 272 SRDsEMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyv 351 (508)
T KOG0275|consen 272 SRDSEMLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYV 351 (508)
T ss_pred cccHHHhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccc
Confidence 9999999999999999999976 55666665 899999999999999999999999999999999999999999999999
Q ss_pred EEEEecCC-CEEEEEeCCCeEEEEEcCCCcceEEEe--------------------------------------------
Q 010754 361 LDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFA-------------------------------------------- 395 (502)
Q Consensus 361 ~~v~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~-------------------------------------------- 395 (502)
....|.++ ..+++++.||+|++|+..+..++.+|+
T Consensus 352 n~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQvVrsfs 431 (508)
T KOG0275|consen 352 NEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQVVRSFS 431 (508)
T ss_pred cceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccceEEeeec
Confidence 99999664 569999999999999998766554433
Q ss_pred ---cCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceE
Q 010754 396 ---GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFL 472 (502)
Q Consensus 396 ---~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~ 472 (502)
...+...+.+.+|.|.++.+.++|+.++.+.+.+|++.+.+..|...+..++-+|... .+.+-+.|+.++
T Consensus 432 SGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHPHqN-------llAsYsEDgllK 504 (508)
T KOG0275|consen 432 SGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLPVHEKDVIGLTHHPHQN-------LLASYSEDGLLK 504 (508)
T ss_pred cCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCceeeeeecccccccccccCcccc-------hhhhhcccchhh
Confidence 0123455677899999999999999999999999999999999999999999999987 333344556677
Q ss_pred EE
Q 010754 473 YW 474 (502)
Q Consensus 473 iw 474 (502)
+|
T Consensus 505 LW 506 (508)
T KOG0275|consen 505 LW 506 (508)
T ss_pred hc
Confidence 77
No 59
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=3.4e-28 Score=237.67 Aligned_cols=264 Identities=19% Similarity=0.309 Sum_probs=224.2
Q ss_pred CCCCcccccCCCCceeeeCCCce----EEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeE
Q 010754 186 GPEPMDIATTSASESFEIPNSDV----TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVL 261 (502)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~----~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~ 261 (502)
.|....+.+.-.++.++++.-+. ..+..|.++|..++|+|.+.++++|+.|.+|++|+..+.+++
T Consensus 18 HP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrcl----------- 86 (1202)
T KOG0292|consen 18 HPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCL----------- 86 (1202)
T ss_pred CCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceeh-----------
Confidence 45555666777777777776554 456799999999999999999999999999999999876643
Q ss_pred EEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEE
Q 010754 262 VLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAI 340 (502)
Q Consensus 262 ~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~ 340 (502)
....+|-..|..+.|++.-..|+++|.|.+|+||+.. .+++..+.+|..-|.|..|+|....++++|.|-+|+
T Consensus 87 ------ftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVR 160 (1202)
T KOG0292|consen 87 ------FTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVR 160 (1202)
T ss_pred ------hhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEE
Confidence 3345667889999999999999999999999999976 578889999999999999999999999999999999
Q ss_pred EEEcCCCc-----------------------------eEEEEeeccCCeEEEEecCC-CEEEEEeCCCeEEEEEcCCCc-
Q 010754 341 VWDVKTEE-----------------------------WKQQFEFHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENR- 389 (502)
Q Consensus 341 ~wd~~~~~-----------------------------~~~~~~~~~~~v~~v~~~~~-~~~~~~~~d~~i~i~d~~~~~- 389 (502)
+||+..-+ ..+.+.+|...|.-++|+|. ..|++|+.|+.|++|.+...+
T Consensus 161 VWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKa 240 (1202)
T KOG0292|consen 161 VWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKA 240 (1202)
T ss_pred EEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccc
Confidence 99984211 23446678888999999885 568889999999999998766
Q ss_pred -ceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeec
Q 010754 390 -PIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLI 468 (502)
Q Consensus 390 -~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~ 468 (502)
.+.+..||.+.|+++-|+|...+++|.|+|++|+|||+...+.+++++......+.++-+|... ++.|+-|
T Consensus 241 WEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrrendRFW~laahP~lN--------LfAAgHD 312 (1202)
T KOG0292|consen 241 WEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHPELN--------LFAAGHD 312 (1202)
T ss_pred eeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeeccCCeEEEEEecCCcc--------eeeeecC
Confidence 3677899999999999999999999999999999999999999999987777899999999987 4555555
Q ss_pred CceEEE
Q 010754 469 PYFLYW 474 (502)
Q Consensus 469 ~~~~iw 474 (502)
+.+.++
T Consensus 313 sGm~VF 318 (1202)
T KOG0292|consen 313 SGMIVF 318 (1202)
T ss_pred CceEEE
Confidence 555555
No 60
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.96 E-value=8e-29 Score=238.15 Aligned_cols=231 Identities=26% Similarity=0.356 Sum_probs=198.2
Q ss_pred ccccCCCCceeeeC---CC-----ceEEeccCCCceEEEEEcCCC-CeEEEEeCCCcEEEEecCCCCccCCCCCCCceeE
Q 010754 191 DIATTSASESFEIP---NS-----DVTILEGHTSEVCACAWSPAG-SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVL 261 (502)
Q Consensus 191 ~~~~~~~~~~~~~~---~~-----~~~~l~~H~~~V~~~~~~p~~-~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~ 261 (502)
.+++.+.+.+..++ +. .+....||++.|.+++++..+ .+|+++|.|+++++|++...+.... .
T Consensus 379 llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~--------~ 450 (775)
T KOG0319|consen 379 LLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAF--------P 450 (775)
T ss_pred EEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccc--------c
Confidence 34556666666555 22 245668999999999998754 7999999999999999987432111 1
Q ss_pred EEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEE
Q 010754 262 VLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAI 340 (502)
Q Consensus 262 ~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~ 340 (502)
...........|.+.|+|++++|+.+++|||+.|.+.+||+++ .....++.+|+..|+++.|+|..+.++|+|.|++|+
T Consensus 451 ~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvK 530 (775)
T KOG0319|consen 451 IVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVK 530 (775)
T ss_pred ceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEE
Confidence 1122233445688999999999999999999999999999987 467779999999999999999999999999999999
Q ss_pred EEEcCCCceEEEEeeccCCeEEEEe-cCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCC
Q 010754 341 VWDVKTEEWKQQFEFHSGPTLDVDW-RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD 419 (502)
Q Consensus 341 ~wd~~~~~~~~~~~~~~~~v~~v~~-~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~d 419 (502)
||.+.+..++++|.+|...|..+.| ..+..|++++.||.|++|++.++.++.++.+|++.|.+++.+|.+.+++||+.|
T Consensus 531 IW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~D 610 (775)
T KOG0319|consen 531 IWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGD 610 (775)
T ss_pred EEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecCccceeEecCCC
Confidence 9999999999999999999999999 556779999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEECCC
Q 010754 420 VTAKIWNMKQ 429 (502)
Q Consensus 420 g~i~iwd~~~ 429 (502)
|.|.+|.-.+
T Consensus 611 g~i~~wkD~T 620 (775)
T KOG0319|consen 611 GRIIFWKDVT 620 (775)
T ss_pred eEEEEeecCc
Confidence 9999997433
No 61
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.96 E-value=2.4e-27 Score=210.61 Aligned_cols=231 Identities=24% Similarity=0.388 Sum_probs=190.3
Q ss_pred cccccCCCCcccccCCCCce---eeeCC-CceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCC
Q 010754 181 LQGEKGPEPMDIATTSASES---FEIPN-SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNG 256 (502)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~ 256 (502)
....-.|.....++++.+.. |++.. .....+.||+++|+|+.|+.+|.+||||..+|.|+||+..++.....+
T Consensus 68 Favsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~--- 144 (399)
T KOG0296|consen 68 FAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKL--- 144 (399)
T ss_pred EEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEe---
Confidence 33334444444555555543 33333 246778999999999999999999999999999999999987632111
Q ss_pred CceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEec
Q 010754 257 PLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSC 335 (502)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~ 335 (502)
...-..+.-|.|+|.+..|+.|+.||.+-+|.+.. ...+.+.+|..++++=+|.|+|+.++++..
T Consensus 145 --------------~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~ 210 (399)
T KOG0296|consen 145 --------------DQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYD 210 (399)
T ss_pred --------------ecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEec
Confidence 12245688999999999999999999999999876 788899999999999999999999999999
Q ss_pred CCeEEEEEcCCCceEEEEee------------------------------------------------------------
Q 010754 336 DKTAIVWDVKTEEWKQQFEF------------------------------------------------------------ 355 (502)
Q Consensus 336 d~~i~~wd~~~~~~~~~~~~------------------------------------------------------------ 355 (502)
||+|++||..+++++..+..
T Consensus 211 dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve 290 (399)
T KOG0296|consen 211 DGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVE 290 (399)
T ss_pred CceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhh
Confidence 99999999998876654431
Q ss_pred -----------------------------------ccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCc
Q 010754 356 -----------------------------------HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGE 400 (502)
Q Consensus 356 -----------------------------------~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~ 400 (502)
|..+|..+.|.+...+++++.+|.|++||.++|+.+.++.||...
T Consensus 291 ~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~he~~V~~l~w~~t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~ 370 (399)
T KOG0296|consen 291 SIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICEHEDGVTKLKWLNTDYLLTACANGKVRQWDARTGQLKFTYTGHQMG 370 (399)
T ss_pred hcccccccchhhcccccceEEEEecccchhheeccCCCceEEEEEcCcchheeeccCceEEeeeccccceEEEEecCchh
Confidence 112356666767677899999999999999999999999999999
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 010754 401 VNCVKWDPTGSLLASCSDDVTAKIWNMK 428 (502)
Q Consensus 401 i~~l~~sp~g~~las~s~dg~i~iwd~~ 428 (502)
|.+++++|+.++++|+|.|++.+|+++.
T Consensus 371 Il~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 371 ILDFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred eeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence 9999999999999999999999999864
No 62
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=4e-28 Score=237.20 Aligned_cols=242 Identities=20% Similarity=0.336 Sum_probs=214.0
Q ss_pred eccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEE
Q 010754 211 LEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA 290 (502)
Q Consensus 211 l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~ 290 (502)
+...+..|..++|+|...+++++-..|.|++||..=+. +...+..|.++|..++|+|++.+++
T Consensus 5 fEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~t-----------------li~rFdeHdGpVRgv~FH~~qplFV 67 (1202)
T KOG0292|consen 5 FESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGT-----------------LIDRFDEHDGPVRGVDFHPTQPLFV 67 (1202)
T ss_pred hhcccccccceecCCCCCEEEEeecCceeeeehhhhhh-----------------HHhhhhccCCccceeeecCCCCeEE
Confidence 44456788999999999999999999999999977544 4455677899999999999999999
Q ss_pred EEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecC-C
Q 010754 291 TGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-N 368 (502)
Q Consensus 291 s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~-~ 368 (502)
+|+.|-.|+||+.. .++..++.+|-.-|..+.|++.-.+|+++|.|-+|+||+..+++++..+.+|..-|+|..|+| +
T Consensus 68 SGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptE 147 (1202)
T KOG0292|consen 68 SGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTE 147 (1202)
T ss_pred ecCCccEEEEEecccceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCcc
Confidence 99999999999976 467789999999999999999999999999999999999999999999999999999999998 7
Q ss_pred CEEEEEeCCCeEEEEEcCCCc-----------------------------ceEEEecCCCcEEEEEEcCCCCEEEEEeCC
Q 010754 369 VSFATSSTDNMIYVCKIGENR-----------------------------PIKTFAGHQGEVNCVKWDPTGSLLASCSDD 419 (502)
Q Consensus 369 ~~~~~~~~d~~i~i~d~~~~~-----------------------------~~~~~~~h~~~i~~l~~sp~g~~las~s~d 419 (502)
..+++++-|.+|++||+..-+ .-..+.||...|+-++|+|.-.+|+||++|
T Consensus 148 DlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DD 227 (1202)
T KOG0292|consen 148 DLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADD 227 (1202)
T ss_pred ceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCc
Confidence 789999999999999985310 113567999999999999999999999999
Q ss_pred CcEEEEECCCCe--eEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 420 VTAKIWNMKQDK--YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 420 g~i~iwd~~~~~--~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
..|++|.+...+ .+-+.++|..+|.++-|+|... .++..|.|+.+++|+.
T Consensus 228 RqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~-------lIlSnsEDksirVwDm 279 (1202)
T KOG0292|consen 228 RQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQD-------LILSNSEDKSIRVWDM 279 (1202)
T ss_pred ceeeEEEeccccceeehhhhcccCCcceEEecCccc-------eeEecCCCccEEEEec
Confidence 999999987544 3456779999999999999876 6788888999999963
No 63
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=1.5e-27 Score=199.78 Aligned_cols=255 Identities=21% Similarity=0.350 Sum_probs=214.7
Q ss_pred ccCCCCceeeeCCC----ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecC
Q 010754 193 ATTSASESFEIPNS----DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKG 268 (502)
Q Consensus 193 ~~~~~~~~~~~~~~----~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (502)
.+.+.+..+++++. .++++.||...|..++.+.|...|++|+.|..+.+||+.+++.. .
T Consensus 33 ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~-----------------R 95 (307)
T KOG0316|consen 33 LTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVD-----------------R 95 (307)
T ss_pred EEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeee-----------------e
Confidence 34555666777654 47889999999999999999999999999999999999998743 3
Q ss_pred ccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCC---ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcC
Q 010754 269 RTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG---DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK 345 (502)
Q Consensus 269 ~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~ 345 (502)
.+.+|...|+.+.|+.+...+++|+.|..+++||-+. .+++.+......|.++..+ +..|++|+.||+++.||++
T Consensus 96 r~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~--~heIvaGS~DGtvRtydiR 173 (307)
T KOG0316|consen 96 RFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA--EHEIVAGSVDGTVRTYDIR 173 (307)
T ss_pred ecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec--ccEEEeeccCCcEEEEEee
Confidence 4456778899999999999999999999999999653 5677888888999999886 5789999999999999999
Q ss_pred CCceEEEEeeccCCeEEEEecCCCE-EEEEeCCCeEEEEEcCCCcceEEEecCCCcEE--EEEEcCCCCEEEEEeCCCcE
Q 010754 346 TEEWKQQFEFHSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVN--CVKWDPTGSLLASCSDDVTA 422 (502)
Q Consensus 346 ~~~~~~~~~~~~~~v~~v~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~--~l~~sp~g~~las~s~dg~i 422 (502)
.|....-+. ..+|++++|+++.. .++++.|+++++.|-.+++.++.++||.+.-. ..+++.....+++||+||.|
T Consensus 174 ~G~l~sDy~--g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~V 251 (307)
T KOG0316|consen 174 KGTLSSDYF--GHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKV 251 (307)
T ss_pred cceeehhhc--CCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeecccceeEEeccCCceE
Confidence 998765554 45799999987655 67888999999999999999999999976533 45677778899999999999
Q ss_pred EEEECCCCeeEEEeccCCCc-EEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 423 KIWNMKQDKYVHDLREHSKE-IYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 423 ~iwd~~~~~~~~~~~~h~~~-i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
++||+.....+..+..++.. |.+++++|.-. .+++|...+ ..+|-.
T Consensus 252 y~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~-------~f~~A~~~~-~~~~~~ 298 (307)
T KOG0316|consen 252 YFWDLVDETQISKLSVVSTVIVTDLSCHPTMD-------DFITATGHG-DLFWYQ 298 (307)
T ss_pred EEEEeccceeeeeeccCCceeEEeeecccCcc-------ceeEecCCc-eeceee
Confidence 99999999999999988888 89999999876 666665444 555543
No 64
>PTZ00421 coronin; Provisional
Probab=99.96 E-value=1.2e-26 Score=230.04 Aligned_cols=251 Identities=14% Similarity=0.163 Sum_probs=195.9
Q ss_pred CCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCC-CCCceeEEEeeecCccccCCCCeEEEEECC-CCCEEEEE
Q 010754 215 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQ-NGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EGTLLATG 292 (502)
Q Consensus 215 ~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~-~g~~l~s~ 292 (502)
-..|.....++++..+++++.+..+..|+...+..+.... .+.. ........+|...|++++|+| ++++|++|
T Consensus 20 ~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~-----~~~~~~l~GH~~~V~~v~fsP~d~~~LaSg 94 (493)
T PTZ00421 20 FLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKL-----ASNPPILLGQEGPIIDVAFNPFDPQKLFTA 94 (493)
T ss_pred eeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccC-----CCCCceEeCCCCCEEEEEEcCCCCCEEEEE
Confidence 3556667777787778888888888899876543211000 0000 000112356889999999999 88999999
Q ss_pred ECCCeEEEEECCC--------ceEEEecCccCCeEEEEEecCC-CEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEE
Q 010754 293 SYDGQARIWSTNG--------DLKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDV 363 (502)
Q Consensus 293 ~~dg~i~iwd~~~--------~~~~~~~~~~~~v~~l~~~~~~-~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v 363 (502)
+.||.|++||+.. ..+..+.+|...|.+++|+|++ ++|++++.|++|++||+.+++.+..+..|...|.++
T Consensus 95 S~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sl 174 (493)
T PTZ00421 95 SEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSL 174 (493)
T ss_pred eCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEE
Confidence 9999999999753 2456788999999999999975 699999999999999999999999999999999999
Q ss_pred EecCCC-EEEEEeCCCeEEEEEcCCCcceEEEecCCCc-EEEEEEcCCCCEEEEEe----CCCcEEEEECCCCe-eEEEe
Q 010754 364 DWRNNV-SFATSSTDNMIYVCKIGENRPIKTFAGHQGE-VNCVKWDPTGSLLASCS----DDVTAKIWNMKQDK-YVHDL 436 (502)
Q Consensus 364 ~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~-i~~l~~sp~g~~las~s----~dg~i~iwd~~~~~-~~~~~ 436 (502)
+|++++ .|++++.|+.|++||+++++.+..+.+|.+. +..+.|.+++..|++++ .|+.|++||+++.. ++...
T Consensus 175 a~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~ 254 (493)
T PTZ00421 175 EWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTV 254 (493)
T ss_pred EEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEe
Confidence 998765 5889999999999999999999999999765 45778999888877654 47899999998754 44443
Q ss_pred ccC-CCcEEEEEEccCCCCCCCCCccEEEEe-ecCceEEEEee
Q 010754 437 REH-SKEIYTIRWSPTGSGTNNPNQQLILAR-LIPYFLYWICS 477 (502)
Q Consensus 437 ~~h-~~~i~~v~~sp~g~~~~~~~~~l~las-~~~~~~iw~~~ 477 (502)
..+ ...+....|+|++. .+++++ +|+.+++|...
T Consensus 255 ~~d~~~~~~~~~~d~d~~-------~L~lggkgDg~Iriwdl~ 290 (493)
T PTZ00421 255 DLDQSSALFIPFFDEDTN-------LLYIGSKGEGNIRCFELM 290 (493)
T ss_pred ccCCCCceEEEEEcCCCC-------EEEEEEeCCCeEEEEEee
Confidence 333 34566778999987 667776 48999999753
No 65
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=1.1e-27 Score=202.70 Aligned_cols=238 Identities=19% Similarity=0.348 Sum_probs=195.0
Q ss_pred EEEEEcCC-CCeEEEEe-------CCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC-CCEE
Q 010754 219 CACAWSPA-GSLLASGS-------GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE-GTLL 289 (502)
Q Consensus 219 ~~~~~~p~-~~~l~sgs-------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~-g~~l 289 (502)
.++.|||- .++||.+. ..|++.|-++...+.+. ....+ .-...+..++|+++ .+.+
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~----------e~~s~-----d~~D~LfdV~Wse~~e~~~ 76 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQ----------ECQSY-----DTEDGLFDVAWSENHENQV 76 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeE----------EEEee-----ecccceeEeeecCCCcceE
Confidence 57889993 44444432 46889998886433211 11111 12456999999985 4688
Q ss_pred EEEECCCeEEEEECC--CceEEEecCccCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEec
Q 010754 290 ATGSYDGQARIWSTN--GDLKCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 366 (502)
Q Consensus 290 ~s~~~dg~i~iwd~~--~~~~~~~~~~~~~v~~l~~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~ 366 (502)
++++.||.++|||+. ...+..++.|...|.++.|++ ++..+++++.|++|++|+......+++|.+|...|....|+
T Consensus 77 ~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~s 156 (311)
T KOG0277|consen 77 IAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFS 156 (311)
T ss_pred EEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecC
Confidence 899999999999954 567888999999999999998 45678888999999999999999999999999999999997
Q ss_pred C--CCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEECCCC-eeEEEeccCCCc
Q 010754 367 N--NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-TGSLLASCSDDVTAKIWNMKQD-KYVHDLREHSKE 442 (502)
Q Consensus 367 ~--~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp-~g~~las~s~dg~i~iwd~~~~-~~~~~~~~h~~~ 442 (502)
| .+.|++++.|+++++||++.......+..|...|.++.|+. +.++|+||+.|+.||+||+++- .++..+.+|.-.
T Consensus 157 p~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~A 236 (311)
T KOG0277|consen 157 PHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLA 236 (311)
T ss_pred CCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceE
Confidence 7 57799999999999999987655556999999999999997 5678999999999999999875 467888999999
Q ss_pred EEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 443 IYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 443 i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
|..|+|||... ..|.+||.|++++||+..
T Consensus 237 VRkvk~Sph~~------~lLaSasYDmT~riw~~~ 265 (311)
T KOG0277|consen 237 VRKVKFSPHHA------SLLASASYDMTVRIWDPE 265 (311)
T ss_pred EEEEecCcchh------hHhhhccccceEEecccc
Confidence 99999999875 356788889999999754
No 66
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=3.9e-27 Score=236.44 Aligned_cols=263 Identities=25% Similarity=0.389 Sum_probs=211.6
Q ss_pred CCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCC--ccCCCCCCCceeEEEeeecCccccCCCCeEEEEE
Q 010754 205 NSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGT--SNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW 282 (502)
Q Consensus 205 ~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~ 282 (502)
+..+.+...|.+.|.|+.|+|||++||+||.|+.|.||...... ......++..++...+ ......+|...|..++|
T Consensus 59 ~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk-~~~~l~~H~~DV~Dv~W 137 (942)
T KOG0973|consen 59 PKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWK-VVSILRGHDSDVLDVNW 137 (942)
T ss_pred chhheeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceee-EEEEEecCCCccceecc
Confidence 34567788999999999999999999999999999999988411 1111111111221111 22334458999999999
Q ss_pred CCCCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeecc----
Q 010754 283 NGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS---- 357 (502)
Q Consensus 283 s~~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~---- 357 (502)
+|++.+|++++.|+.|.||+.. ......+.+|.+.|..+.|.|-|+||++-+.|++|++|++.+..+.+.+..+-
T Consensus 138 sp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~ 217 (942)
T KOG0973|consen 138 SPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESP 217 (942)
T ss_pred CCCccEEEEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCC
Confidence 9999999999999999999965 46777899999999999999999999999999999999987776766665432
Q ss_pred --CCeEEEEecCCCEEEEE-----eCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCC-------------CC----EE
Q 010754 358 --GPTLDVDWRNNVSFATS-----STDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT-------------GS----LL 413 (502)
Q Consensus 358 --~~v~~v~~~~~~~~~~~-----~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~-------------g~----~l 413 (502)
.-...+.|+|++.+++. +...++.|.+-.+.+.-..|-||.+++.+++|+|. +. .+
T Consensus 218 ~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~ 297 (942)
T KOG0973|consen 218 LTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIA 297 (942)
T ss_pred CcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEE
Confidence 24788999998876544 33457888888888888899999999999999981 11 68
Q ss_pred EEEeCCCcEEEEECCCCeeEEEec-cCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 414 ASCSDDVTAKIWNMKQDKYVHDLR-EHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 414 as~s~dg~i~iwd~~~~~~~~~~~-~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
|+||.|++|.||.....+++..+. -....|.+++|+|||. .|+.+|.|+++.+..
T Consensus 298 AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI~DmsWspdG~-------~LfacS~DGtV~~i~ 353 (942)
T KOG0973|consen 298 AVGSQDRSLSVWNTALPRPLFVIHNLFNKSIVDMSWSPDGF-------SLFACSLDGTVALIH 353 (942)
T ss_pred EEecCCccEEEEecCCCCchhhhhhhhcCceeeeeEcCCCC-------eEEEEecCCeEEEEE
Confidence 899999999999998888776554 3467899999999998 889999999988874
No 67
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=3.8e-27 Score=216.84 Aligned_cols=240 Identities=18% Similarity=0.271 Sum_probs=201.1
Q ss_pred EEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC-CC
Q 010754 209 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE-GT 287 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~-g~ 287 (502)
+++.-..+.|++++|..||++||+|...|.|+|+|+.+. ........|..+|..+.|+|+ +.
T Consensus 62 k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r-----------------~iLR~~~ah~apv~~~~f~~~d~t 124 (487)
T KOG0310|consen 62 KTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSR-----------------VILRQLYAHQAPVHVTKFSPQDNT 124 (487)
T ss_pred hhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccccH-----------------HHHHHHhhccCceeEEEecccCCe
Confidence 334456688999999999999999999999999995542 133445677889999999995 56
Q ss_pred EEEEEECCCeEEEEECCCceEE-EecCccCCeEEEEEecCC-CEEEEEecCCeEEEEEcCCC-ceEEEEeeccCCeEEEE
Q 010754 288 LLATGSYDGQARIWSTNGDLKC-TLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTE-EWKQQFEFHSGPTLDVD 364 (502)
Q Consensus 288 ~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~v~~l~~~~~~-~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~v~~v~ 364 (502)
.+++|+.|+.+++||+.+..+. .+.+|+..|.|.+|+|.. ..++||+.||.|++||+++. ..+..+. |..+|-.+.
T Consensus 125 ~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~eln-hg~pVe~vl 203 (487)
T KOG0310|consen 125 MLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELN-HGCPVESVL 203 (487)
T ss_pred EEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEec-CCCceeeEE
Confidence 7888889999999999876554 788999999999999954 58889999999999999987 4555554 888999999
Q ss_pred ecCCCEEEEEeCCCeEEEEEcCCC-cceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcE
Q 010754 365 WRNNVSFATSSTDNMIYVCKIGEN-RPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEI 443 (502)
Q Consensus 365 ~~~~~~~~~~~~d~~i~i~d~~~~-~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i 443 (502)
+.|++.+++......|++||+.+| +.+..+..|...|+|+++..++..|+||+-|+.|++||+.+.+.++.+. ..++|
T Consensus 204 ~lpsgs~iasAgGn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~-~~~pv 282 (487)
T KOG0310|consen 204 ALPSGSLIASAGGNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWK-YPGPV 282 (487)
T ss_pred EcCCCCEEEEcCCCeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccceEEEEeee-cccce
Confidence 988866666667789999999955 4455555599999999999999999999999999999999999999887 67899
Q ss_pred EEEEEccCCCCCCCCCccEEEEeecCceEEE
Q 010754 444 YTIRWSPTGSGTNNPNQQLILARLIPYFLYW 474 (502)
Q Consensus 444 ~~v~~sp~g~~~~~~~~~l~las~~~~~~iw 474 (502)
.+++.+|+++ .+++|-++|.+.+.
T Consensus 283 Lsiavs~dd~-------t~viGmsnGlv~~r 306 (487)
T KOG0310|consen 283 LSIAVSPDDQ-------TVVIGMSNGLVSIR 306 (487)
T ss_pred eeEEecCCCc-------eEEEecccceeeee
Confidence 9999999887 67777777766655
No 68
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=6.1e-26 Score=189.00 Aligned_cols=254 Identities=24% Similarity=0.322 Sum_probs=204.4
Q ss_pred cCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEE
Q 010754 213 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG 292 (502)
Q Consensus 213 ~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~ 292 (502)
..+..|.+++|+|.|.+.|.|+...+.+|-....-............ ...........|.+.|.|.+|+|+|.+|++|
T Consensus 30 ~dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~--pp~v~~kr~khhkgsiyc~~ws~~geliatg 107 (350)
T KOG0641|consen 30 EDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQ--PPSVLCKRNKHHKGSIYCTAWSPCGELIATG 107 (350)
T ss_pred cchhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccC--CCeEEeeeccccCccEEEEEecCccCeEEec
Confidence 34567999999999999999999999998765542211111111100 0011222345678899999999999999999
Q ss_pred ECCCeEEEEECCCc------eEEEecCccCCeEEEEEecC----CCEEEEEe-cCCeEEEEEcCCCceEEEEeeccCCeE
Q 010754 293 SYDGQARIWSTNGD------LKCTLSKHKGPIFSLKWNKK----GDYLLTGS-CDKTAIVWDVKTEEWKQQFEFHSGPTL 361 (502)
Q Consensus 293 ~~dg~i~iwd~~~~------~~~~~~~~~~~v~~l~~~~~----~~~l~s~~-~d~~i~~wd~~~~~~~~~~~~~~~~v~ 361 (502)
+.|..|++..++.. .-..+.-|.+.|..++|..+ +..|++++ .|..|++-|..+|+..+.+.+|.+-|.
T Consensus 108 sndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtghil 187 (350)
T KOG0641|consen 108 SNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGHIL 187 (350)
T ss_pred CCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCcccEE
Confidence 99999999876532 33467789999999999643 35666654 477899999999999999999999999
Q ss_pred EEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEec--C-----CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEE
Q 010754 362 DVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAG--H-----QGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH 434 (502)
Q Consensus 362 ~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~--h-----~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~ 434 (502)
++---.+-.|++|+.|.+|++||++-..++.++.. | .+.|.+++..|.|++|++|-.|....+||++.++.++
T Consensus 188 alyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq 267 (350)
T KOG0641|consen 188 ALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQ 267 (350)
T ss_pred EEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceee
Confidence 88666677899999999999999999988877642 2 2569999999999999999999999999999999999
Q ss_pred EeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 435 DLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 435 ~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
.+..|+..|.++.|||... +++++|.|+.+++-+
T Consensus 268 ~f~phsadir~vrfsp~a~-------yllt~syd~~ikltd 301 (350)
T KOG0641|consen 268 RFHPHSADIRCVRFSPGAH-------YLLTCSYDMKIKLTD 301 (350)
T ss_pred eeCCCccceeEEEeCCCce-------EEEEecccceEEEee
Confidence 9999999999999999876 889999998888764
No 69
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=3.4e-26 Score=200.31 Aligned_cols=259 Identities=16% Similarity=0.261 Sum_probs=207.0
Q ss_pred EEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCC--ceeEEE-----------------------
Q 010754 209 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGP--LNVLVL----------------------- 263 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~--~~~~~~----------------------- 263 (502)
+.+..-.+.|.++.|+++|.+|++++.|.+++|||..+++....+.... .....+
T Consensus 8 k~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl 87 (311)
T KOG1446|consen 8 KVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSL 87 (311)
T ss_pred cccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEe
Confidence 3444456889999999999999999999999999999887655433221 111000
Q ss_pred --eeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCCceEE-EecCccCCeEEEEEecCCCEEEEEecCCeEE
Q 010754 264 --KHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKC-TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAI 340 (502)
Q Consensus 264 --~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~ 340 (502)
.....-+.+|...|++++.+|-+..+++++.|++|++||++..... .+.... -..++|.|.|-++|++.....|+
T Consensus 88 ~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~--~pi~AfDp~GLifA~~~~~~~Ik 165 (311)
T KOG1446|consen 88 HDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSG--RPIAAFDPEGLIFALANGSELIK 165 (311)
T ss_pred ecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCC--CcceeECCCCcEEEEecCCCeEE
Confidence 1123445689999999999999999999999999999998843333 332222 24568999999999998888999
Q ss_pred EEEcCCC--ceEEEEeec---cCCeEEEEecCCCE-EEEEeCCCeEEEEEcCCCcceEEEecCCCcE---EEEEEcCCCC
Q 010754 341 VWDVKTE--EWKQQFEFH---SGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEV---NCVKWDPTGS 411 (502)
Q Consensus 341 ~wd~~~~--~~~~~~~~~---~~~v~~v~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i---~~l~~sp~g~ 411 (502)
+||++.- .+..++... ......+.|++++. ++.+...+.+++.|.-.|..+.++.++...- ...+|+|+++
T Consensus 166 LyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~ 245 (311)
T KOG1446|consen 166 LYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSK 245 (311)
T ss_pred EEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCc
Confidence 9999864 345555444 55688999988776 6677788889999999999999998875432 5678999999
Q ss_pred EEEEEeCCCcEEEEECCCCeeEEEecc-CCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEeee
Q 010754 412 LLASCSDDVTAKIWNMKQDKYVHDLRE-HSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICSI 478 (502)
Q Consensus 412 ~las~s~dg~i~iwd~~~~~~~~~~~~-h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~ 478 (502)
++++|+.||+|.+|++++++.+..+.+ +.+++.++.|+|.-. +.++++..+.+|....
T Consensus 246 Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~---------mf~sa~s~l~fw~p~~ 304 (311)
T KOG1446|consen 246 FVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYA---------MFVSASSNLVFWLPDE 304 (311)
T ss_pred EEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCcee---------eeeecCceEEEEeccc
Confidence 999999999999999999999999998 789999999999865 9999999999998653
No 70
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.96 E-value=9.1e-27 Score=202.00 Aligned_cols=223 Identities=25% Similarity=0.428 Sum_probs=184.2
Q ss_pred CCceEEEEEcC-CCCeEEEEeCCCcEEEEecCCC-CccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEE
Q 010754 215 TSEVCACAWSP-AGSLLASGSGDSTARIWTIADG-TSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG 292 (502)
Q Consensus 215 ~~~V~~~~~~p-~~~~l~sgs~dg~v~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~ 292 (502)
.+.|.+++||| ...+++.||.|++||+|+++.. ... ......|.++|.+++|+.+|..+++|
T Consensus 27 ~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~----------------~ka~~~~~~PvL~v~WsddgskVf~g 90 (347)
T KOG0647|consen 27 EDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLV----------------PKAQQSHDGPVLDVCWSDDGSKVFSG 90 (347)
T ss_pred ccchheeEeccccCceEEecccCCceEEEEEecCCccc----------------chhhhccCCCeEEEEEccCCceEEee
Confidence 47799999999 5677889999999999999874 221 12234567899999999999999999
Q ss_pred ECCCeEEEEECCCceEEEecCccCCeEEEEEecCCC--EEEEEecCCeEEEEEcCCCceEEEEeecc-------------
Q 010754 293 SYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGD--YLLTGSCDKTAIVWDVKTEEWKQQFEFHS------------- 357 (502)
Q Consensus 293 ~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~--~l~s~~~d~~i~~wd~~~~~~~~~~~~~~------------- 357 (502)
+.|+.+++||+.......+..|.++|.++.|-+... .|+|||.|++|+.||++...++.++....
T Consensus 91 ~~Dk~~k~wDL~S~Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~~pm~v 170 (347)
T KOG0647|consen 91 GCDKQAKLWDLASGQVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVLYPMAV 170 (347)
T ss_pred ccCCceEEEEccCCCeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhccCceeE
Confidence 999999999999889999999999999999988665 89999999999999999877655543211
Q ss_pred ----------------------------CCeEEEEe-cCCCEEEEEeCCCeEEEEEcCCC--cceEEEecCCC-------
Q 010754 358 ----------------------------GPTLDVDW-RNNVSFATSSTDNMIYVCKIGEN--RPIKTFAGHQG------- 399 (502)
Q Consensus 358 ----------------------------~~v~~v~~-~~~~~~~~~~~d~~i~i~d~~~~--~~~~~~~~h~~------- 399 (502)
-.+.+|+. .+...++.|+.+|++.|..+..+ +.-.+|+.|..
T Consensus 171 Vata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~ 250 (347)
T KOG0647|consen 171 VATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDD 250 (347)
T ss_pred EEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCc
Confidence 12344443 44555788999999988888776 44456677752
Q ss_pred --cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCC
Q 010754 400 --EVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 400 --~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
.|++|+|+|....|++++.||++.+||-.....+.....|..+|++.+|+.+|+
T Consensus 251 VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~G~ 306 (347)
T KOG0647|consen 251 VYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCCSFNRNGS 306 (347)
T ss_pred eEEecceEeecccceEEEecCCceEEEecchhhhhhhccCcCCCccceeEecCCCC
Confidence 478899999999999999999999999888888888889999999999999998
No 71
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.96 E-value=4.5e-27 Score=233.20 Aligned_cols=238 Identities=24% Similarity=0.407 Sum_probs=209.1
Q ss_pred ceEE-eccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC
Q 010754 207 DVTI-LEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 207 ~~~~-l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~ 285 (502)
.+.. +.||.+.|.++++..-+.+|++|+.|.++++||+.++.+.. ...+|...|.++...
T Consensus 240 ~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~-----------------~l~gh~stv~~~~~~-- 300 (537)
T KOG0274|consen 240 LILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTH-----------------SLQGHTSSVRCLTID-- 300 (537)
T ss_pred EEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEE-----------------EecCCCceEEEEEcc--
Confidence 3555 89999999999998878899999999999999999987543 223566778888764
Q ss_pred CCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEE
Q 010754 286 GTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD 364 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~ 364 (502)
...+++|+.|.+|++|+++ +..+..+.+|.++|.++..+ +.++++|+.|++|++||+.+++++..+.+|...|.++.
T Consensus 301 ~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~ 378 (537)
T KOG0274|consen 301 PFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLI 378 (537)
T ss_pred CceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEE
Confidence 4578889999999999988 56666677799999999987 78999999999999999999999999999999999998
Q ss_pred ecCCCEEEEEeCCCeEEEEEcCCC-cceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEecc-CCCc
Q 010754 365 WRNNVSFATSSTDNMIYVCKIGEN-RPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE-HSKE 442 (502)
Q Consensus 365 ~~~~~~~~~~~~d~~i~i~d~~~~-~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~-h~~~ 442 (502)
+.+...+++|+.|++|++||+++. +++.++.+|..-+..+.+ .+++|++++.||+|++||..++++++.+.+ |...
T Consensus 379 ~~~~~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~--~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~ 456 (537)
T KOG0274|consen 379 VDSENRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLL--RDNFLVSSSADGTIKLWDAEEGECLRTLEGRHVGG 456 (537)
T ss_pred ecCcceEEeeeeccceEeecCCchhhhhhhhcCCccccccccc--ccceeEeccccccEEEeecccCceeeeeccCCccc
Confidence 877688999999999999999999 999999999998877665 478999999999999999999999999998 6788
Q ss_pred EEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 443 IYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 443 i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
|+.+++. ...++.++.++.+++|+.
T Consensus 457 v~~l~~~---------~~~il~s~~~~~~~l~dl 481 (537)
T KOG0274|consen 457 VSALALG---------KEEILCSSDDGSVKLWDL 481 (537)
T ss_pred EEEeecC---------cceEEEEecCCeeEEEec
Confidence 9999887 125788888999999964
No 72
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.95 E-value=4.8e-28 Score=214.69 Aligned_cols=244 Identities=20% Similarity=0.305 Sum_probs=193.9
Q ss_pred CceEEeccCCCceEEEEEcCCC-CeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC
Q 010754 206 SDVTILEGHTSEVCACAWSPAG-SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 284 (502)
Q Consensus 206 ~~~~~l~~H~~~V~~~~~~p~~-~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~ 284 (502)
..+..|.||.+.|.|++=+|.. ..+|+|+.||.|+|||+....+.. .+..|.+.|..|++..
T Consensus 57 PFv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~-----------------~f~AH~G~V~Gi~v~~ 119 (433)
T KOG0268|consen 57 PFVGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIR-----------------TFKAHEGLVRGICVTQ 119 (433)
T ss_pred cchhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhh-----------------eeecccCceeeEEecc
Confidence 3567789999999999999976 889999999999999998765432 3344566788888766
Q ss_pred CCCEEEEEECCCeEEEEECCCce---------------------------------------EEEecCccCCeEEEEEec
Q 010754 285 EGTLLATGSYDGQARIWSTNGDL---------------------------------------KCTLSKHKGPIFSLKWNK 325 (502)
Q Consensus 285 ~g~~l~s~~~dg~i~iwd~~~~~---------------------------------------~~~~~~~~~~v~~l~~~~ 325 (502)
..+++++.|.+|+.|..++.. +..+.-....|.+++|+|
T Consensus 120 --~~~~tvgdDKtvK~wk~~~~p~~tilg~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNp 197 (433)
T KOG0268|consen 120 --TSFFTVGDDKTVKQWKIDGPPLHTILGKSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNP 197 (433)
T ss_pred --cceEEecCCcceeeeeccCCcceeeeccccccccccccccccccccCceeeecccccCCccceeecCCCceeEEecCC
Confidence 567777778888888644322 222222344578888898
Q ss_pred CC-CEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCE-EEEEeCCCeEEEEEcCCC-cceEEEecCCCcEE
Q 010754 326 KG-DYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGEN-RPIKTFAGHQGEVN 402 (502)
Q Consensus 326 ~~-~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~~~~d~~i~i~d~~~~-~~~~~~~~h~~~i~ 402 (502)
.. ..|++|+.|++|.+||++++.+++.+.. ......|+|.|+.. |+++..|..++.||++.- .++..+.+|.+.|.
T Consensus 198 vETsILas~~sDrsIvLyD~R~~~Pl~KVi~-~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~ 276 (433)
T KOG0268|consen 198 VETSILASCASDRSIVLYDLRQASPLKKVIL-TMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVM 276 (433)
T ss_pred CcchheeeeccCCceEEEecccCCccceeee-eccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEE
Confidence 66 4566777999999999999998887653 34567899998544 889999999999999875 58899999999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEec-cCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 403 CVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR-EHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 403 ~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~-~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
.+.|||.|+-+++||.|.+|+||.++.+..--.+. .--..|.++.||.|.. +++.||.++.+++|-.
T Consensus 277 dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dsk-------yi~SGSdd~nvRlWka 344 (433)
T KOG0268|consen 277 DVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSK-------YIISGSDDGNVRLWKA 344 (433)
T ss_pred EeccCCCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEecccc-------EEEecCCCcceeeeec
Confidence 99999999999999999999999998776433321 1124599999999988 8999999999999953
No 73
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=2.3e-27 Score=199.73 Aligned_cols=249 Identities=24% Similarity=0.372 Sum_probs=199.8
Q ss_pred EeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC--CCC
Q 010754 210 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG--EGT 287 (502)
Q Consensus 210 ~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~--~g~ 287 (502)
+-.+|.+.|..+...-.|++|||++.|++|||+.+.+.... .+.....+|.++|..++|.. -|.
T Consensus 6 idt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s--------------~ll~~L~Gh~GPVwqv~wahPk~G~ 71 (299)
T KOG1332|consen 6 IDTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQS--------------KLLAELTGHSGPVWKVAWAHPKFGT 71 (299)
T ss_pred hhhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCc--------------eeeeEecCCCCCeeEEeecccccCc
Confidence 44679999999998888999999999999999999875421 13345567899999999976 899
Q ss_pred EEEEEECCCeEEEEECCCc---eEEEecCccCCeEEEEEecC--CCEEEEEecCCeEEEEEcCCC-c--eEEEEeeccCC
Q 010754 288 LLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKK--GDYLLTGSCDKTAIVWDVKTE-E--WKQQFEFHSGP 359 (502)
Q Consensus 288 ~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~v~~l~~~~~--~~~l~s~~~d~~i~~wd~~~~-~--~~~~~~~~~~~ 359 (502)
+||++++||.|.||.-.+. .......|...|++++|.|. |-.|++++.||.|.+.+.+.. . ..+....|.-.
T Consensus 72 iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~G 151 (299)
T KOG1332|consen 72 ILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIG 151 (299)
T ss_pred EeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccc
Confidence 9999999999999997654 33456679999999999985 468889999999999988654 2 23445678889
Q ss_pred eEEEEecCC---------------CEEEEEeCCCeEEEEEcCCCc--ceEEEecCCCcEEEEEEcCCC----CEEEEEeC
Q 010754 360 TLDVDWRNN---------------VSFATSSTDNMIYVCKIGENR--PIKTFAGHQGEVNCVKWDPTG----SLLASCSD 418 (502)
Q Consensus 360 v~~v~~~~~---------------~~~~~~~~d~~i~i~d~~~~~--~~~~~~~h~~~i~~l~~sp~g----~~las~s~ 418 (502)
|.+++|.|. .+|++|+.|+.|.||+..++. .-.+|.+|.+.|..++|.|.- .+||+||.
T Consensus 152 vnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~Sq 231 (299)
T KOG1332|consen 152 VNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQ 231 (299)
T ss_pred cceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecC
Confidence 999999764 359999999999999998863 345689999999999999964 47999999
Q ss_pred CCcEEEEECCCCe---eEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEeeeE
Q 010754 419 DVTAKIWNMKQDK---YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICSIY 479 (502)
Q Consensus 419 dg~i~iwd~~~~~---~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~~ 479 (502)
||++.||-.+... ....+......++.+.||+.|. .|.++.+|+.+++|.-++.
T Consensus 232 Dg~viIwt~~~e~e~wk~tll~~f~~~~w~vSWS~sGn-------~LaVs~GdNkvtlwke~~~ 288 (299)
T KOG1332|consen 232 DGTVIIWTKDEEYEPWKKTLLEEFPDVVWRVSWSLSGN-------ILAVSGGDNKVTLWKENVD 288 (299)
T ss_pred CCcEEEEEecCccCcccccccccCCcceEEEEEecccc-------EEEEecCCcEEEEEEeCCC
Confidence 9999999865221 1122334556799999999998 5666677788888875543
No 74
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.95 E-value=1e-26 Score=207.57 Aligned_cols=240 Identities=23% Similarity=0.368 Sum_probs=200.7
Q ss_pred cCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC---CEE
Q 010754 213 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG---TLL 289 (502)
Q Consensus 213 ~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g---~~l 289 (502)
-|.+-|.++.-. +..+++|+.||.+++|+..... .....+|.++|.+++|.-.. ..+
T Consensus 103 ~hdDWVSsv~~~--~~~IltgsYDg~~riWd~~Gk~------------------~~~~~Ght~~ik~v~~v~~n~~~~~f 162 (423)
T KOG0313|consen 103 LHDDWVSSVKGA--SKWILTGSYDGTSRIWDLKGKS------------------IKTIVGHTGPIKSVAWVIKNSSSCLF 162 (423)
T ss_pred cchhhhhhhccc--CceEEEeecCCeeEEEecCCce------------------EEEEecCCcceeeeEEEecCCccceE
Confidence 477888888776 7899999999999999976532 12234667889988885433 369
Q ss_pred EEEECCCeEEEEECCCc-----eEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcC-------------------
Q 010754 290 ATGSYDGQARIWSTNGD-----LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK------------------- 345 (502)
Q Consensus 290 ~s~~~dg~i~iwd~~~~-----~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~------------------- 345 (502)
++++.|.++++|-.+.. ......+|...|-++...++|..+++|+.|.+|.+|+..
T Consensus 163 vsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~ 242 (423)
T KOG0313|consen 163 VSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQK 242 (423)
T ss_pred EEecCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhh
Confidence 99999999999986532 222334999999999999999999999999999999832
Q ss_pred ------CCceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCC
Q 010754 346 ------TEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD 419 (502)
Q Consensus 346 ------~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~d 419 (502)
++.++..+.+|..+|.++.|.+...+++++.|.+|+.||+.++..+.++.+ ...++++.++|..++||+||.|
T Consensus 243 ~~~~~~~r~P~vtl~GHt~~Vs~V~w~d~~v~yS~SwDHTIk~WDletg~~~~~~~~-~ksl~~i~~~~~~~Ll~~gssd 321 (423)
T KOG0313|consen 243 REKEGGTRTPLVTLEGHTEPVSSVVWSDATVIYSVSWDHTIKVWDLETGGLKSTLTT-NKSLNCISYSPLSKLLASGSSD 321 (423)
T ss_pred hhhcccccCceEEecccccceeeEEEcCCCceEeecccceEEEEEeecccceeeeec-CcceeEeecccccceeeecCCC
Confidence 123566788999999999999999999999999999999999999888874 5679999999999999999999
Q ss_pred CcEEEEECCCCe---eEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEeeeE
Q 010754 420 VTAKIWNMKQDK---YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICSIY 479 (502)
Q Consensus 420 g~i~iwd~~~~~---~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~~ 479 (502)
..|++||.+++. ..+.+.+|...|.++.|+|... .+++.+|.|+.+++|++.-.
T Consensus 322 r~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~------~~~~S~S~D~t~klWDvRS~ 378 (423)
T KOG0313|consen 322 RHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNE------FQLVSGSYDNTVKLWDVRST 378 (423)
T ss_pred CceeecCCCCCCCceeEEeeecchhhhhheecCCCCc------eEEEEEecCCeEEEEEeccC
Confidence 999999998753 3467889999999999999876 46788999999999986543
No 75
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.95 E-value=2e-26 Score=195.95 Aligned_cols=225 Identities=20% Similarity=0.363 Sum_probs=199.8
Q ss_pred EeccCCCceEEEEEcCC-CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCE
Q 010754 210 ILEGHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 288 (502)
Q Consensus 210 ~l~~H~~~V~~~~~~p~-~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~ 288 (502)
..+||.+.|-.++|+|. ..+|++++.|.+|++||+..+++...... ...-.-+.|+|+|.+
T Consensus 59 ~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~~------------------~~eni~i~wsp~g~~ 120 (313)
T KOG1407|consen 59 VYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIET------------------KGENINITWSPDGEY 120 (313)
T ss_pred cccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEeec------------------cCcceEEEEcCCCCE
Confidence 45799999999999994 68999999999999999998875321111 233456789999999
Q ss_pred EEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCC
Q 010754 289 LATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN 368 (502)
Q Consensus 289 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~ 368 (502)
+++++.|..|.+.|.+.............+..++|+.+++.|+.....|+|.|......++++.+..|...+.+|.|.|.
T Consensus 121 ~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~ 200 (313)
T KOG1407|consen 121 IAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPD 200 (313)
T ss_pred EEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCC
Confidence 99999999999999887766666667778899999988888887777899999999999999999999999999999886
Q ss_pred C-EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEE
Q 010754 369 V-SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIR 447 (502)
Q Consensus 369 ~-~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~ 447 (502)
+ .|++|+.|..+.+||+..--+++.+..+.-+|..|.||.+|++||+||+|..|-|=++.+|..+..++ +.++-.+|+
T Consensus 201 GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~-~~~~t~tVA 279 (313)
T KOG1407|consen 201 GRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIP-CEGPTFTVA 279 (313)
T ss_pred CceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeEecccCCeEEEee-ccCCceeEE
Confidence 5 59999999999999999999999999999999999999999999999999999999999999999997 888999999
Q ss_pred EccCCC
Q 010754 448 WSPTGS 453 (502)
Q Consensus 448 ~sp~g~ 453 (502)
|+|...
T Consensus 280 WHPk~~ 285 (313)
T KOG1407|consen 280 WHPKRP 285 (313)
T ss_pred ecCCCc
Confidence 999977
No 76
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.95 E-value=3.3e-26 Score=207.51 Aligned_cols=237 Identities=21% Similarity=0.367 Sum_probs=206.1
Q ss_pred CCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEEC
Q 010754 215 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY 294 (502)
Q Consensus 215 ~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~ 294 (502)
...|+++...|..+.++||+.|.++.++|.+.++.. ..+.+|...|+.+.++|+...+++++.
T Consensus 219 ~pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l-----------------~~~~Gh~kki~~v~~~~~~~~v~~aSa 281 (506)
T KOG0289|consen 219 TPGITALDIIPSSSKILTGGEDKTAVLFDKPSNQIL-----------------ATLKGHTKKITSVKFHKDLDTVITASA 281 (506)
T ss_pred CCCeeEEeecCCCCcceecCCCCceEEEecchhhhh-----------------hhccCcceEEEEEEeccchhheeecCC
Confidence 356888888888789999999999999998876633 344567788999999999999999999
Q ss_pred CCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeec--cCCeEEEEecCCCE-
Q 010754 295 DGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH--SGPTLDVDWRNNVS- 370 (502)
Q Consensus 295 dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~--~~~v~~v~~~~~~~- 370 (502)
|..|+||... .........|..+|+.+..+|.|.||++++.|+++.+.|++++.++...... .-.+++..|+|++.
T Consensus 282 d~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLi 361 (506)
T KOG0289|consen 282 DEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLI 361 (506)
T ss_pred cceEEeeccccccCccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceE
Confidence 9999999964 4556677889999999999999999999999999999999999988776643 23588999998876
Q ss_pred EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEecc-CCCcEEEEEEc
Q 010754 371 FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE-HSKEIYTIRWS 449 (502)
Q Consensus 371 ~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~-h~~~i~~v~~s 449 (502)
|.+|..|+.++|||+.+...+..|.+|+++|..|+|+.+|.|||++++|+.|++||++..+.+.++.. ...++.++.|.
T Consensus 362 fgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD 441 (506)
T KOG0289|consen 362 FGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFD 441 (506)
T ss_pred EeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEc
Confidence 77889999999999999999999999999999999999999999999999999999999888777763 33479999999
Q ss_pred cCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 450 PTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 450 p~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
+.|. +++.+..+++++++.
T Consensus 442 ~SGt---------~L~~~g~~l~Vy~~~ 460 (506)
T KOG0289|consen 442 QSGT---------YLGIAGSDLQVYICK 460 (506)
T ss_pred CCCC---------eEEeecceeEEEEEe
Confidence 9999 666667788888765
No 77
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=1.9e-27 Score=214.15 Aligned_cols=206 Identities=25% Similarity=0.457 Sum_probs=165.0
Q ss_pred eEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC
Q 010754 208 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~ 287 (502)
.+++.||..+|.-+.||||.++|++|+.|..+++||+.++........ ++...+.+++|.|||.
T Consensus 262 ~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~----------------~~~~S~~sc~W~pDg~ 325 (519)
T KOG0293|consen 262 KKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPS----------------GLGFSVSSCAWCPDGF 325 (519)
T ss_pred eeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhccc----------------CcCCCcceeEEccCCc
Confidence 678899999999999999999999999999999999999875432211 1245689999999999
Q ss_pred EEEEEECCCeEEEEECCCceEEEecC------------------------------------------ccCCeEEEEEec
Q 010754 288 LLATGSYDGQARIWSTNGDLKCTLSK------------------------------------------HKGPIFSLKWNK 325 (502)
Q Consensus 288 ~l~s~~~dg~i~iwd~~~~~~~~~~~------------------------------------------~~~~v~~l~~~~ 325 (502)
.+++|+.|+.|..||+++.......+ ...+|++++.+.
T Consensus 326 ~~V~Gs~dr~i~~wdlDgn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~ 405 (519)
T KOG0293|consen 326 RFVTGSPDRTIIMWDLDGNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISK 405 (519)
T ss_pred eeEecCCCCcEEEecCCcchhhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhccccccCceeEEEEcC
Confidence 99999999999999987643222221 234566777777
Q ss_pred CCCEEEEEecCCeEEEEEcCCCceEEEEeeccCC--eEEEEec--CCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcE
Q 010754 326 KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP--TLDVDWR--NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEV 401 (502)
Q Consensus 326 ~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~--v~~v~~~--~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i 401 (502)
+++++++.-.+..+.+||+.....++.+.+|... +..-||. ++..+++|+.|+.|+||+..+++++..+.||...|
T Consensus 406 d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~v 485 (519)
T KOG0293|consen 406 DGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTV 485 (519)
T ss_pred CCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCCccee
Confidence 7777777767777777777777777777777654 4444553 34568899999999999999999999999999999
Q ss_pred EEEEEcCCC-CEEEEEeCCCcEEEEECCC
Q 010754 402 NCVKWDPTG-SLLASCSDDVTAKIWNMKQ 429 (502)
Q Consensus 402 ~~l~~sp~g-~~las~s~dg~i~iwd~~~ 429 (502)
+|++|+|.. .++||+|+||+||||....
T Consensus 486 NcVswNP~~p~m~ASasDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 486 NCVSWNPADPEMFASASDDGTIRIWGPSD 514 (519)
T ss_pred eEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence 999999964 5799999999999998653
No 78
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.95 E-value=2e-25 Score=185.91 Aligned_cols=249 Identities=25% Similarity=0.407 Sum_probs=198.7
Q ss_pred eEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC---
Q 010754 208 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG--- 284 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~--- 284 (502)
.+.-+.|.++|+|.+|+|+|.+||+|+.|.+|++..+....+.... ....+.-|.+.|..++|-.
T Consensus 82 ~kr~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g------------~dle~nmhdgtirdl~fld~~~ 149 (350)
T KOG0641|consen 82 CKRNKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATG------------HDLEFNMHDGTIRDLAFLDDPE 149 (350)
T ss_pred eeeccccCccEEEEEecCccCeEEecCCCceEEEEecccccccccC------------cceeeeecCCceeeeEEecCCC
Confidence 3445679999999999999999999999999999887765432211 1123344678899999954
Q ss_pred -CCCEEEEEEC-CCeEEEEEC-CCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEee--c---
Q 010754 285 -EGTLLATGSY-DGQARIWST-NGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF--H--- 356 (502)
Q Consensus 285 -~g~~l~s~~~-dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~--~--- 356 (502)
.|.+|++++. |..|++-|. ++.....+.+|.+-|.++- +-++-.|++|+.|.+|++||++-..++.++.. |
T Consensus 150 s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtghilaly-swn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~g 228 (350)
T KOG0641|consen 150 SGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGHILALY-SWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGG 228 (350)
T ss_pred cCceEEEecCCCcceEEEeecCCCCcceeecCCcccEEEEE-EecCcEEEccCCCceEEEEeeeccceeeeccCcccCCC
Confidence 3557777653 445555553 3677888999999998873 44678999999999999999999888887643 2
Q ss_pred --cCCeEEEEecCCCE-EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCC---
Q 010754 357 --SGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD--- 430 (502)
Q Consensus 357 --~~~v~~v~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~--- 430 (502)
...|.+++..|.++ +++|-.|....+||++.+++++.|..|...|.|+.|+|...|+++|+.|..|++=|+...
T Consensus 229 lessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~ 308 (350)
T KOG0641|consen 229 LESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAH 308 (350)
T ss_pred cccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhh
Confidence 34688888877655 677888999999999999999999999999999999999999999999999999998632
Q ss_pred -eeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 431 -KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 431 -~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
-.+.....|...+..+.|+|..- .++..|+|.+..+|-.
T Consensus 309 el~~~vv~ehkdk~i~~rwh~~d~-------sfisssadkt~tlwa~ 348 (350)
T KOG0641|consen 309 ELPIMVVAEHKDKAIQCRWHPQDF-------SFISSSADKTATLWAL 348 (350)
T ss_pred cCceEEEEeccCceEEEEecCccc-------eeeeccCcceEEEecc
Confidence 12334447888999999999875 6788899999999964
No 79
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.95 E-value=3.3e-26 Score=218.84 Aligned_cols=253 Identities=19% Similarity=0.329 Sum_probs=216.8
Q ss_pred cccCCCCceeeeCCCc------eEEeccCCCceEE-EEEcC-CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEE
Q 010754 192 IATTSASESFEIPNSD------VTILEGHTSEVCA-CAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVL 263 (502)
Q Consensus 192 ~~~~~~~~~~~~~~~~------~~~l~~H~~~V~~-~~~~p-~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~ 263 (502)
+...+.++.+.++.+. .+.+.+|.+-|.+ +++-+ ++-.|++|+.|.++.+|.+.....
T Consensus 28 i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P-------------- 93 (745)
T KOG0301|consen 28 IISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEP-------------- 93 (745)
T ss_pred EeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEEEEecCCCCc--------------
Confidence 3444555556655443 3556778888887 88886 455799999999999999887552
Q ss_pred eeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEE
Q 010754 264 KHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWD 343 (502)
Q Consensus 264 ~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd 343 (502)
.....+|...|.+++...++. +++|+.|.++++|.. +.+...+.+|...|++++.-|.+ .++|||.|++|++|.
T Consensus 94 ---~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~-~~l~~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk 167 (745)
T KOG0301|consen 94 ---LYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRI-GELVYSLQGHTASVWAVASLPEN-TYVTGSADKTIKLWK 167 (745)
T ss_pred ---hhhhhccccceeeeecCCcCc-eEecccccceEEecc-hhhhcccCCcchheeeeeecCCC-cEEeccCcceeeecc
Confidence 334567788999999888887 999999999999964 55666799999999999999987 899999999999996
Q ss_pred cCCCceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q 010754 344 VKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAK 423 (502)
Q Consensus 344 ~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~ 423 (502)
.++.+++|.+|.+.|..++..++..|++|+.||.|+.|++ ++..+..+.||+..|.++...+++..++|+++|++++
T Consensus 168 --~~~~l~tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlr 244 (745)
T KOG0301|consen 168 --GGTLLKTFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLR 244 (745)
T ss_pred --CCchhhhhccchhheeeeEEecCCCeEeecCCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEE
Confidence 4888999999999999999999999999999999999999 7888999999999999999888899999999999999
Q ss_pred EEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 424 IWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 424 iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
||+.. .+.+.+.-.+..|+++.+-++|. +++|++||.++||..+
T Consensus 245 iW~~~--e~~q~I~lPttsiWsa~~L~NgD--------Ivvg~SDG~VrVfT~~ 288 (745)
T KOG0301|consen 245 IWKKD--ECVQVITLPTTSIWSAKVLLNGD--------IVVGGSDGRVRVFTVD 288 (745)
T ss_pred EeecC--ceEEEEecCccceEEEEEeeCCC--------EEEeccCceEEEEEec
Confidence 99876 88888886666899999999986 8999999999999644
No 80
>PTZ00420 coronin; Provisional
Probab=99.95 E-value=3.9e-25 Score=220.11 Aligned_cols=221 Identities=17% Similarity=0.269 Sum_probs=170.4
Q ss_pred EeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC-CCEEEEEECCCeEEEEECCCc-----
Q 010754 233 GSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE-GTLLATGSYDGQARIWSTNGD----- 306 (502)
Q Consensus 233 gs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~-g~~l~s~~~dg~i~iwd~~~~----- 306 (502)
|+.++.|++|+..... ......+|...|.+++|+|+ +.+|++|+.||.|+|||+...
T Consensus 50 GG~~gvI~L~~~~r~~-----------------~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~ 112 (568)
T PTZ00420 50 GGLIGAIRLENQMRKP-----------------PVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVK 112 (568)
T ss_pred CCceeEEEeeecCCCc-----------------eEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCcccc
Confidence 5667888888865432 11223467889999999996 789999999999999997531
Q ss_pred ----eEEEecCccCCeEEEEEecCCCEE-EEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCE-EEEEeCCCeE
Q 010754 307 ----LKCTLSKHKGPIFSLKWNKKGDYL-LTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS-FATSSTDNMI 380 (502)
Q Consensus 307 ----~~~~~~~~~~~v~~l~~~~~~~~l-~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~~~~d~~i 380 (502)
....+.+|...|.+++|+|++..+ ++++.|++|++||+++++....+. +...|.+++|++++. |++++.|+.|
T Consensus 113 ~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~I 191 (568)
T PTZ00420 113 EIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHM 191 (568)
T ss_pred ccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEE
Confidence 234678899999999999988764 688999999999999998777765 567899999987654 6667789999
Q ss_pred EEEEcCCCcceEEEecCCCcEEE-----EEEcCCCCEEEEEeCCC----cEEEEECCC-CeeEEEec--cCCCcEEEEEE
Q 010754 381 YVCKIGENRPIKTFAGHQGEVNC-----VKWDPTGSLLASCSDDV----TAKIWNMKQ-DKYVHDLR--EHSKEIYTIRW 448 (502)
Q Consensus 381 ~i~d~~~~~~~~~~~~h~~~i~~-----l~~sp~g~~las~s~dg----~i~iwd~~~-~~~~~~~~--~h~~~i~~v~~ 448 (502)
++||++++..+.++.+|.+.+.+ ..|++++.+|++++.|+ .|+|||+++ ++++..+. .+.+.+.....
T Consensus 192 rIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D 271 (568)
T PTZ00420 192 HIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYD 271 (568)
T ss_pred EEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeee
Confidence 99999999999999999876543 33568999999988774 799999985 56665554 23333334444
Q ss_pred ccCCCCCCCCCccEEEEeecCceEEEEeee
Q 010754 449 SPTGSGTNNPNQQLILARLIPYFLYWICSI 478 (502)
Q Consensus 449 sp~g~~~~~~~~~l~las~~~~~~iw~~~~ 478 (502)
.++|. .+++|++|+.+++|.+..
T Consensus 272 ~~tg~-------l~lsGkGD~tIr~~e~~~ 294 (568)
T PTZ00420 272 ESTGL-------IYLIGKGDGNCRYYQHSL 294 (568)
T ss_pred CCCCC-------EEEEEECCCeEEEEEccC
Confidence 44455 667788899999998643
No 81
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=1.2e-25 Score=196.28 Aligned_cols=245 Identities=20% Similarity=0.298 Sum_probs=200.2
Q ss_pred CceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC
Q 010754 206 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 206 ~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~ 285 (502)
.++..+..|.++|++++.+ +.++|+||.|-+|+|||+.+..... ....|.+.|+++.|.+.
T Consensus 34 ~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg-----------------~ll~HagsitaL~F~~~ 94 (362)
T KOG0294|consen 34 KPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLG-----------------ILLSHAGSITALKFYPP 94 (362)
T ss_pred eccccccccccceeEEEec--ceeEeccCCCCcEEEEeccchhhhc-----------------ceeccccceEEEEecCC
Confidence 3456778999999999985 8999999999999999998865432 22345788999999987
Q ss_pred CC--EEEEEECCCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEE
Q 010754 286 GT--LLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLD 362 (502)
Q Consensus 286 g~--~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~ 362 (502)
-. .|++|+.||.|.+|+... .++..+.+|.+.|+.++.+|.++.-++.+.|+.+++||+-+|+.-........ ...
T Consensus 95 ~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~-at~ 173 (362)
T KOG0294|consen 95 LSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNK-ATL 173 (362)
T ss_pred cchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCCc-cee
Confidence 65 899999999999999875 66778999999999999999999999999999999999988876554443322 334
Q ss_pred EEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCc
Q 010754 363 VDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKE 442 (502)
Q Consensus 363 v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~ 442 (502)
+.|.+.+..++.+....|-+|.+.+......+. ....+.++.|- ++..|++|.+|+.|++||.....+...+.+|...
T Consensus 174 v~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~~i~-~~~r~l~~~~l-~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~R 251 (362)
T KOG0294|consen 174 VSWSPQGDHFVVSGRNKIDIYQLDNASVFREIE-NPKRILCATFL-DGSELLVGGDNEWISLKDTDSDTPLTEFLAHENR 251 (362)
T ss_pred eEEcCCCCEEEEEeccEEEEEecccHhHhhhhh-ccccceeeeec-CCceEEEecCCceEEEeccCCCccceeeecchhh
Confidence 899887664444455678899998877665554 22557777776 6778999999999999999999999999999999
Q ss_pred EEEEEEc--cCCCCCCCCCccEEEEeecCceEEEEeeeE
Q 010754 443 IYTIRWS--PTGSGTNNPNQQLILARLIPYFLYWICSIY 479 (502)
Q Consensus 443 i~~v~~s--p~g~~~~~~~~~l~las~~~~~~iw~~~~~ 479 (502)
|.++.+- |++. +|+++|+||.+++|..++.
T Consensus 252 VK~i~~~~~~~~~-------~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 252 VKDIASYTNPEHE-------YLVTASSDGFIKVWDIDME 283 (362)
T ss_pred eeeeEEEecCCce-------EEEEeccCceEEEEEcccc
Confidence 9999854 4444 8999999999999987654
No 82
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.95 E-value=4.8e-26 Score=208.13 Aligned_cols=257 Identities=21% Similarity=0.375 Sum_probs=203.8
Q ss_pred eEEeccCCCceEEEEEcCC-CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 208 VTILEGHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~-~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
+...--|.+.|+.+.+.|. ..++|+++..+.|.|||..+-.......... .+.....+|.+.-++|+|++..
T Consensus 117 i~~~i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~-------~Pdl~L~gH~~eg~glsWn~~~ 189 (422)
T KOG0264|consen 117 ISQKINHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGEC-------RPDLRLKGHEKEGYGLSWNRQQ 189 (422)
T ss_pred EEEeccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccC-------CCceEEEeeccccccccccccc
Confidence 3444579999999999995 6788889999999999987654322211110 1112233455567889999954
Q ss_pred -CEEEEEECCCeEEEEECCC--------ceEEEecCccCCeEEEEEecCC-CEEEEEecCCeEEEEEcC--CCceEEEEe
Q 010754 287 -TLLATGSYDGQARIWSTNG--------DLKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVK--TEEWKQQFE 354 (502)
Q Consensus 287 -~~l~s~~~dg~i~iwd~~~--------~~~~~~~~~~~~v~~l~~~~~~-~~l~s~~~d~~i~~wd~~--~~~~~~~~~ 354 (502)
-.|++|+.|+.|++||++. .....+.+|...|..++|++.. ..|.+++.|+.+.|||+| +.++.+...
T Consensus 190 ~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ 269 (422)
T KOG0264|consen 190 EGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVK 269 (422)
T ss_pred ceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCccccc
Confidence 4789999999999999763 2345788999999999999954 678899999999999999 566777788
Q ss_pred eccCCeEEEEecC--CCEEEEEeCCCeEEEEEcCCC-cceEEEecCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEECCCC
Q 010754 355 FHSGPTLDVDWRN--NVSFATSSTDNMIYVCKIGEN-RPIKTFAGHQGEVNCVKWDPT-GSLLASCSDDVTAKIWNMKQD 430 (502)
Q Consensus 355 ~~~~~v~~v~~~~--~~~~~~~~~d~~i~i~d~~~~-~~~~~~~~h~~~i~~l~~sp~-g~~las~s~dg~i~iwd~~~~ 430 (502)
.|.+.+.++.|.| +..||+|+.|++|.+||+|+- +++.++.+|...|.+|.|+|. ...|||++.|+.+.|||+..-
T Consensus 270 ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~i 349 (422)
T KOG0264|consen 270 AHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRI 349 (422)
T ss_pred ccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEecccc
Confidence 8999999999976 556899999999999999975 578999999999999999997 467899999999999998542
Q ss_pred --------------eeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 431 --------------KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 431 --------------~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
+++....||...|..+.|+|..+ -.+..++.|+.+.||..+
T Consensus 350 g~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~eP------W~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 350 GEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEP------WTIASVAEDNILQIWQMA 404 (422)
T ss_pred ccccChhhhccCCcceeEEecCcccccccccCCCCCC------eEEEEecCCceEEEeecc
Confidence 23456669999999999999987 123444556778999764
No 83
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.95 E-value=2.1e-26 Score=221.84 Aligned_cols=217 Identities=25% Similarity=0.423 Sum_probs=187.0
Q ss_pred eEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC
Q 010754 208 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~ 287 (502)
+-++++|.+.|+.++.+||+..++|||.|.+|++|++.-..... .....++.+. ......-...|.|+++||||+
T Consensus 447 ~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~---gt~~k~lsl~--~~rtLel~ddvL~v~~Spdgk 521 (888)
T KOG0306|consen 447 VETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVP---GTQKKVLSLK--HTRTLELEDDVLCVSVSPDGK 521 (888)
T ss_pred hhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccC---cccceeeeec--cceEEeccccEEEEEEcCCCc
Confidence 34567999999999999999999999999999999975322111 1111111111 112223356899999999999
Q ss_pred EEEEEECCCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEec
Q 010754 288 LLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 366 (502)
Q Consensus 288 ~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~ 366 (502)
+|+++--|.+|+||-++. +...++.+|.-||.||..+|+++.++|||.|++|++|-+.-|.|.+.+..|...|+++.|.
T Consensus 522 ~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~ 601 (888)
T KOG0306|consen 522 LLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFL 601 (888)
T ss_pred EEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEc
Confidence 999999999999999886 5667899999999999999999999999999999999999999999999999999999998
Q ss_pred CCCE-EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 010754 367 NNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ 429 (502)
Q Consensus 367 ~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~ 429 (502)
|... |.+|+.|+.|+-||-..-..++++.+|...|.|++.+|+|.+++|+|.|.+|++|....
T Consensus 602 P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE~td 665 (888)
T KOG0306|consen 602 PKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWERTD 665 (888)
T ss_pred ccceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcCCCCeEEeccCCceeEeeeccC
Confidence 8654 88999999999999999999999999999999999999999999999999999998654
No 84
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.95 E-value=7.1e-26 Score=207.00 Aligned_cols=223 Identities=22% Similarity=0.315 Sum_probs=194.2
Q ss_pred ccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEE
Q 010754 212 EGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLAT 291 (502)
Q Consensus 212 ~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s 291 (502)
++|.+.|.+++.+|||++||+|+.|..|.||+..+.+.+. .+.+|.+.|.+++|-.....+++
T Consensus 199 ~~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~-----------------~~~ghr~~V~~L~fr~gt~~lys 261 (479)
T KOG0299|consen 199 KGHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVK-----------------VFKGHRGAVSSLAFRKGTSELYS 261 (479)
T ss_pred ccccceeEEEEEcCCCcEEEecCCCceEEEecCcccchhh-----------------cccccccceeeeeeecCccceee
Confidence 4899999999999999999999999999999999876332 24567889999999988889999
Q ss_pred EECCCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCE
Q 010754 292 GSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS 370 (502)
Q Consensus 292 ~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~ 370 (502)
++.|+.|++|+++. ..+.++.+|.+.|.+|.-...++.+-+|+.|+++++|++. ......|.++.+.+-+++|.++..
T Consensus 262 ~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~-eesqlifrg~~~sidcv~~In~~H 340 (479)
T KOG0299|consen 262 ASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIP-EESQLIFRGGEGSIDCVAFINDEH 340 (479)
T ss_pred eecCCceEEEehhHhHHHHHHhCCccceeeechhcccceEEeccccceeEEEecc-ccceeeeeCCCCCeeeEEEecccc
Confidence 99999999999874 5667889999999999988888888888899999999994 444556788899999999999999
Q ss_pred EEEEeCCCeEEEEEcCCCcceEEEec-C-----------CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCC----eeEE
Q 010754 371 FATSSTDNMIYVCKIGENRPIKTFAG-H-----------QGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD----KYVH 434 (502)
Q Consensus 371 ~~~~~~d~~i~i~d~~~~~~~~~~~~-h-----------~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~----~~~~ 434 (502)
|++|+.+|.|.+|++.+.+|+.+... | ...|++++..|...++|+||.+|.|++|-+..+ +++.
T Consensus 341 fvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~ 420 (479)
T KOG0299|consen 341 FVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLY 420 (479)
T ss_pred eeeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceee
Confidence 99999999999999999999877642 2 127999999999999999999999999998776 4555
Q ss_pred EeccCCCcEEEEEEccCCC
Q 010754 435 DLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 435 ~~~~h~~~i~~v~~sp~g~ 453 (502)
.+. -.+-|++++|+++|.
T Consensus 421 ~ls-~~GfVNsl~f~~sgk 438 (479)
T KOG0299|consen 421 SLS-LVGFVNSLAFSNSGK 438 (479)
T ss_pred ecc-cccEEEEEEEccCCC
Confidence 555 567899999999997
No 85
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.95 E-value=7.7e-26 Score=227.24 Aligned_cols=258 Identities=22% Similarity=0.324 Sum_probs=206.9
Q ss_pred cCCCceEEEEEcCCCCeEEEEe--CCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEE
Q 010754 213 GHTSEVCACAWSPAGSLLASGS--GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA 290 (502)
Q Consensus 213 ~H~~~V~~~~~~p~~~~l~sgs--~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~ 290 (502)
.+...|++++.+|+|..+|||+ .||.++||+...--....... ..+.........|.+.|+|+.|+|||++||
T Consensus 11 H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~-----~~l~k~l~~m~~h~~sv~CVR~S~dG~~lA 85 (942)
T KOG0973|consen 11 HNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKN-----ENLPKHLCTMDDHDGSVNCVRFSPDGSYLA 85 (942)
T ss_pred cCCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhh-----cccchhheeeccccCceeEEEECCCCCeEe
Confidence 3456799999999999999999 899999999764210000000 012223344556789999999999999999
Q ss_pred EEECCCeEEEEECCC-------------------ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEE
Q 010754 291 TGSYDGQARIWSTNG-------------------DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQ 351 (502)
Q Consensus 291 s~~~dg~i~iwd~~~-------------------~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~ 351 (502)
+|+.|+.|.||.... +.+..+.+|...|..++|+|++.+|++++.|++|.+||.++.+.+.
T Consensus 86 sGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~ 165 (942)
T KOG0973|consen 86 SGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLK 165 (942)
T ss_pred eccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeee
Confidence 999999999998651 1466788999999999999999999999999999999999999999
Q ss_pred EEeeccCCeEEEEecCC-CEEEEEeCCCeEEEEEcCCCcceEEEecCC------CcEEEEEEcCCCCEEEEEeC----CC
Q 010754 352 QFEFHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFAGHQ------GEVNCVKWDPTGSLLASCSD----DV 420 (502)
Q Consensus 352 ~~~~~~~~v~~v~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~------~~i~~l~~sp~g~~las~s~----dg 420 (502)
.+.+|.+.|-.+.|.|- ..|++-+.|++|++|++.+....+.+.++. ..+..+.|||||.+|++... -.
T Consensus 166 vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~ 245 (942)
T KOG0973|consen 166 VLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKS 245 (942)
T ss_pred eeecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcc
Confidence 99999999999999885 457888999999999988877777776553 35788999999999998753 34
Q ss_pred cEEEEECCCCeeEEEeccCCCcEEEEEEccCCC------CCCC-CC-c--cEEEEeecCceEEEE
Q 010754 421 TAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGS------GTNN-PN-Q--QLILARLIPYFLYWI 475 (502)
Q Consensus 421 ~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~------~~~~-~~-~--~l~las~~~~~~iw~ 475 (502)
++.|.+-.+.+.-..+-+|.+++..++|+|.=- +... ++ . -+..||-|+.+.||.
T Consensus 246 ~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~ 310 (942)
T KOG0973|consen 246 TIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWN 310 (942)
T ss_pred eeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEe
Confidence 789999989998889999999999999998421 1111 11 2 344566678899995
No 86
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.95 E-value=3.5e-27 Score=216.78 Aligned_cols=206 Identities=21% Similarity=0.385 Sum_probs=177.1
Q ss_pred eecCccccCCCCeEEEEECC-CCCEEEEEECCCeEEEEECC--CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEE
Q 010754 265 HVKGRTNEKSKDVTTLDWNG-EGTLLATGSYDGQARIWSTN--GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIV 341 (502)
Q Consensus 265 ~~~~~~~~~~~~v~~l~~s~-~g~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~ 341 (502)
.......+|...|+++.|.| .+.+|++|+.|+.|+||++- +.++.++.+|..+|..++|+++|..|++++.|+.|++
T Consensus 205 k~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKl 284 (503)
T KOG0282|consen 205 KLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKL 284 (503)
T ss_pred hheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeee
Confidence 34455678899999999999 89999999999999999964 6889999999999999999999999999999999999
Q ss_pred EEcCCCceEEEEeeccCCeEEEEecCC--CEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCC
Q 010754 342 WDVKTEEWKQQFEFHSGPTLDVDWRNN--VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD 419 (502)
Q Consensus 342 wd~~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~d 419 (502)
||+++|+++..|. ....+.++.|.|+ +.|++|+.|+.|+.||+++++.++.+..|-+.|..+.|-++|+++++.++|
T Consensus 285 wDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDd 363 (503)
T KOG0282|consen 285 WDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDD 363 (503)
T ss_pred eccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccC
Confidence 9999999999886 4456788999775 469999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEECCCCee--------------------------------E--------------EEeccCC--CcEEEEEEccC
Q 010754 420 VTAKIWNMKQDKY--------------------------------V--------------HDLREHS--KEIYTIRWSPT 451 (502)
Q Consensus 420 g~i~iwd~~~~~~--------------------------------~--------------~~~~~h~--~~i~~v~~sp~ 451 (502)
++++||+.+..-. + ..+.+|. +--..+.||||
T Consensus 364 ks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpD 443 (503)
T KOG0282|consen 364 KSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPD 443 (503)
T ss_pred ccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCC
Confidence 9999999754211 1 1233554 33567899999
Q ss_pred CCCCCCCCccEEEEeecCceEEEEeee
Q 010754 452 GSGTNNPNQQLILARLIPYFLYWICSI 478 (502)
Q Consensus 452 g~~~~~~~~~l~las~~~~~~iw~~~~ 478 (502)
|. .|+.|.++|.+.+|+|..
T Consensus 444 G~-------~l~SGdsdG~v~~wdwkt 463 (503)
T KOG0282|consen 444 GR-------TLCSGDSDGKVNFWDWKT 463 (503)
T ss_pred CC-------eEEeecCCccEEEeechh
Confidence 99 777777778888887643
No 87
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.94 E-value=1.3e-25 Score=222.78 Aligned_cols=238 Identities=25% Similarity=0.394 Sum_probs=208.8
Q ss_pred EEecc-CCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC
Q 010754 209 TILEG-HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 209 ~~l~~-H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~ 287 (502)
..+.+ |...+.|..|+ +.++++++.|++|++|+..++.. ......+|.+.|.++++...+.
T Consensus 201 ~~~~~~~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~----------------i~~~l~GH~g~V~~l~~~~~~~ 262 (537)
T KOG0274|consen 201 KVLLGTDDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGYL----------------ILTRLVGHFGGVWGLAFPSGGD 262 (537)
T ss_pred eeecccCcchhhhheee--cCeEEecCCCceeEEeecccceE----------------EEeeccCCCCCceeEEEecCCC
Confidence 34444 66778888888 66799999999999999887653 2233567889999999988888
Q ss_pred EEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEec
Q 010754 288 LLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 366 (502)
Q Consensus 288 ~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~ 366 (502)
++++|+.|.++++||.. +.+...+.+|.+.|.++... ..++++|+.|.+|++|++.++.++..+.+|..+|.++...
T Consensus 263 ~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~--~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~ 340 (537)
T KOG0274|consen 263 KLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTID--PFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD 340 (537)
T ss_pred EEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEcc--CceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec
Confidence 99999999999999965 67888999999999999765 4678889999999999999999999999999999999988
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCC-eeEEEeccCCCcEEE
Q 010754 367 NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD-KYVHDLREHSKEIYT 445 (502)
Q Consensus 367 ~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~-~~~~~~~~h~~~i~~ 445 (502)
+..+++|+.|++|.+||+.++++++++.+|...|.++.+.+. ..+++|+.|++|++||+++. +|+..+.+|..-+..
T Consensus 341 -~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~ 418 (537)
T KOG0274|consen 341 -EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSS 418 (537)
T ss_pred -CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhhhhhcCCcccccc
Confidence 888999999999999999999999999999999999988765 89999999999999999999 999999999988866
Q ss_pred EEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 446 IRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 446 v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
+.+... .|+.+++|+.+++|+..
T Consensus 419 l~~~~~---------~Lvs~~aD~~Ik~WD~~ 441 (537)
T KOG0274|consen 419 LLLRDN---------FLVSSSADGTIKLWDAE 441 (537)
T ss_pred cccccc---------eeEeccccccEEEeecc
Confidence 555443 67999999999999643
No 88
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.94 E-value=3.1e-25 Score=201.26 Aligned_cols=231 Identities=21% Similarity=0.329 Sum_probs=197.5
Q ss_pred CceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC
Q 010754 206 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 206 ~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~ 285 (502)
+.+.+|+||...|+.+.++|+...+++++.|..|+||....... ......|..+|+.+..+|.
T Consensus 252 q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~-----------------~~~~~~h~~~V~~ls~h~t 314 (506)
T KOG0289|consen 252 QILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSE-----------------PTSSRPHEEPVTGLSLHPT 314 (506)
T ss_pred hhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccC-----------------ccccccccccceeeeeccC
Confidence 44788999999999999999999999999999999999876542 2233456789999999999
Q ss_pred CCEEEEEECCCeEEEEECCCceEEEecCcc---CCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEE
Q 010754 286 GTLLATGSYDGQARIWSTNGDLKCTLSKHK---GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLD 362 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~ 362 (502)
|.||++++.||...+.|.+.........+. -.+++.+|+|||..|.+|..|+.|++||+.++..+..|.+|.++|..
T Consensus 315 geYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~ 394 (506)
T KOG0289|consen 315 GEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKA 394 (506)
T ss_pred CcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeE
Confidence 999999999999999998755444433332 35899999999999999999999999999999999999999999999
Q ss_pred EEecCCCE-EEEEeCCCeEEEEEcCCCcceEEEecCC-CcEEEEEEcCCCCEEEEEeCCCcEEEEEC--CCCeeEEEecc
Q 010754 363 VDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQ-GEVNCVKWDPTGSLLASCSDDVTAKIWNM--KQDKYVHDLRE 438 (502)
Q Consensus 363 v~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~-~~i~~l~~sp~g~~las~s~dg~i~iwd~--~~~~~~~~~~~ 438 (502)
+.|+.++. +++++.|+.|++||++..+..+++.-.. ..+.++.|++.|.+|+.++.|=.|++++- .++.++..+..
T Consensus 395 i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~ 474 (506)
T KOG0289|consen 395 ISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKELAD 474 (506)
T ss_pred EEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEEEecccccceeeehhhh
Confidence 99998877 7788899999999999998888886443 36999999999999999988766666653 35677888888
Q ss_pred CCCcEEEEEEccCCC
Q 010754 439 HSKEIYTIRWSPTGS 453 (502)
Q Consensus 439 h~~~i~~v~~sp~g~ 453 (502)
|.+..+.+.|....+
T Consensus 475 ~sg~st~v~Fg~~aq 489 (506)
T KOG0289|consen 475 HSGLSTGVRFGEHAQ 489 (506)
T ss_pred cccccceeeecccce
Confidence 998999999998877
No 89
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=2.8e-26 Score=217.72 Aligned_cols=234 Identities=18% Similarity=0.325 Sum_probs=193.5
Q ss_pred EEEEcC-CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeE
Q 010754 220 ACAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQA 298 (502)
Q Consensus 220 ~~~~~p-~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i 298 (502)
.+..++ .+++|+|||.||.|++|++........ .........|...|..+....+|+.|++++.|-+|
T Consensus 29 ~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s-----------~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTV 97 (735)
T KOG0308|consen 29 ALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPS-----------TPYIASMEHHSDWVNDIILCGNGKTLISASSDTTV 97 (735)
T ss_pred hccccCCCCceEEecCCCceEEEeccccccCCcc-----------cchhhhhhhhHhHHhhHHhhcCCCceEEecCCceE
Confidence 344444 577899999999999999875432100 01234456688899999999999999999999999
Q ss_pred EEEECCC---ceEEEecCccCCeEEEEE-ecCCCEEEEEecCCeEEEEEcCCCc--eEEEE--------e-eccCCeEEE
Q 010754 299 RIWSTNG---DLKCTLSKHKGPIFSLKW-NKKGDYLLTGSCDKTAIVWDVKTEE--WKQQF--------E-FHSGPTLDV 363 (502)
Q Consensus 299 ~iwd~~~---~~~~~~~~~~~~v~~l~~-~~~~~~l~s~~~d~~i~~wd~~~~~--~~~~~--------~-~~~~~v~~v 363 (502)
++|+... .+..++..|+..|.|+++ .++...+++|+.|+.|.+||+.++. .+.++ . ++..++.++
T Consensus 98 K~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSL 177 (735)
T KOG0308|consen 98 KVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSL 177 (735)
T ss_pred EEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeee
Confidence 9999653 456678899999999999 7788899999999999999999872 22222 2 566678888
Q ss_pred EecCCC-EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCc
Q 010754 364 DWRNNV-SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKE 442 (502)
Q Consensus 364 ~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~ 442 (502)
+..+.+ .|++|+..+.+++||.++.+.+..+.||+..|..+..++||..++|+|.||+|++||+...+|+.++..|...
T Consensus 178 A~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~ 257 (735)
T KOG0308|consen 178 AMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEG 257 (735)
T ss_pred ecCCcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCc
Confidence 886654 5788899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEccCCCCCCCCCccEEEEeecCce
Q 010754 443 IYTIRWSPTGSGTNNPNQQLILARLIPYF 471 (502)
Q Consensus 443 i~~v~~sp~g~~~~~~~~~l~las~~~~~ 471 (502)
|+++..+|+=. .++.|+.|+.+
T Consensus 258 VWaL~~~~sf~-------~vYsG~rd~~i 279 (735)
T KOG0308|consen 258 VWALQSSPSFT-------HVYSGGRDGNI 279 (735)
T ss_pred eEEEeeCCCcc-------eEEecCCCCcE
Confidence 99999998876 44555444443
No 90
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.94 E-value=3.3e-25 Score=191.58 Aligned_cols=221 Identities=20% Similarity=0.369 Sum_probs=178.8
Q ss_pred EEeccCCCceEEEEEcC-CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC-CC
Q 010754 209 TILEGHTSEVCACAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EG 286 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p-~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~-~g 286 (502)
.+...|.+.|.++...+ .|+++++|+.||.|.+||+++........ -+........+.+..+|...|.++.|-| |.
T Consensus 37 d~~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~--li~k~~c~v~~~h~~~Hky~iss~~WyP~Dt 114 (397)
T KOG4283|consen 37 DFVRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASG--LIAKHKCIVAKQHENGHKYAISSAIWYPIDT 114 (397)
T ss_pred ceeccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhcc--ceeheeeeccccCCccceeeeeeeEEeeecC
Confidence 44567999999999999 58999999999999999998754211000 0000001123456778889999999999 66
Q ss_pred CEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCC---CEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEE
Q 010754 287 TLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKG---DYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDV 363 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~---~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v 363 (502)
-++.+++.|.+++|||.++-.........+.|++-+|+|-. ..+++|..|-.|++-|+.+|.+.+.+.+|.+.|.++
T Consensus 115 GmFtssSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV 194 (397)
T KOG4283|consen 115 GMFTSSSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAV 194 (397)
T ss_pred ceeecccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEE
Confidence 68899999999999999887666666778899999999843 467788888899999999999999999999999999
Q ss_pred EecCCCE--EEEEeCCCeEEEEEcCCC-cceEE--------------EecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 010754 364 DWRNNVS--FATSSTDNMIYVCKIGEN-RPIKT--------------FAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWN 426 (502)
Q Consensus 364 ~~~~~~~--~~~~~~d~~i~i~d~~~~-~~~~~--------------~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd 426 (502)
.|+|... +++|+.||.|++||++.. .+... -..|.+.|++++|+.+|.++++++.|..+++|+
T Consensus 195 ~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn 274 (397)
T KOG4283|consen 195 EWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWN 274 (397)
T ss_pred EeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEee
Confidence 9988654 789999999999999864 22222 345778899999999999999999999999999
Q ss_pred CCCCe
Q 010754 427 MKQDK 431 (502)
Q Consensus 427 ~~~~~ 431 (502)
..+|+
T Consensus 275 ~~~G~ 279 (397)
T KOG4283|consen 275 MESGR 279 (397)
T ss_pred cccCc
Confidence 87764
No 91
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=7.1e-25 Score=190.76 Aligned_cols=243 Identities=22% Similarity=0.406 Sum_probs=188.2
Q ss_pred ccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC--CCCEE
Q 010754 212 EGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG--EGTLL 289 (502)
Q Consensus 212 ~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~--~g~~l 289 (502)
.+|.+-|+|+.|.+.|+++|+|+.|++|+|||..+.... -........|.+.|..+.|.+ -|+.+
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~-------------W~~Ts~Wrah~~Si~rV~WAhPEfGqvv 76 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGT-------------WSCTSSWRAHDGSIWRVVWAHPEFGQVV 76 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCc-------------eEEeeeEEecCCcEEEEEecCccccceE
Confidence 579999999999999999999999999999998554311 123344556788999999976 58999
Q ss_pred EEEECCCeEEEEECC-----C-----ceEEEecCccCCeEEEEEecC--CCEEEEEecCCeEEEEEcCCC------ceEE
Q 010754 290 ATGSYDGQARIWSTN-----G-----DLKCTLSKHKGPIFSLKWNKK--GDYLLTGSCDKTAIVWDVKTE------EWKQ 351 (502)
Q Consensus 290 ~s~~~dg~i~iwd~~-----~-----~~~~~~~~~~~~v~~l~~~~~--~~~l~s~~~d~~i~~wd~~~~------~~~~ 351 (502)
|++++|+++.||.-. . ....++...++.|+.++|.|. |-.|++++.||.++||+...- .+..
T Consensus 77 A~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~ 156 (361)
T KOG2445|consen 77 ATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQH 156 (361)
T ss_pred EEEecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhh
Confidence 999999999999742 1 134466677889999999994 568999999999999986432 2222
Q ss_pred EEe-------eccCCeEEEEecCCC----EEEEEeCC-----CeEEEEEcCCCc----ceEEEecCCCcEEEEEEcCC--
Q 010754 352 QFE-------FHSGPTLDVDWRNNV----SFATSSTD-----NMIYVCKIGENR----PIKTFAGHQGEVNCVKWDPT-- 409 (502)
Q Consensus 352 ~~~-------~~~~~v~~v~~~~~~----~~~~~~~d-----~~i~i~d~~~~~----~~~~~~~h~~~i~~l~~sp~-- 409 (502)
.+. .+..+..++.|.+.. .|++|+.+ +.++||....+. .+.++.+|..+|+.|+|.|+
T Consensus 157 Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~G 236 (361)
T KOG2445|consen 157 EIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIG 236 (361)
T ss_pred hhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccC
Confidence 222 345678899998653 36776665 478888876543 46677899999999999996
Q ss_pred --CCEEEEEeCCCcEEEEECCCC--------------------eeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEee
Q 010754 410 --GSLLASCSDDVTAKIWNMKQD--------------------KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARL 467 (502)
Q Consensus 410 --g~~las~s~dg~i~iwd~~~~--------------------~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~ 467 (502)
-.+||+++.|| |+||++... +.+..+..|.++|+.+.|.-.|. .|...+.
T Consensus 237 r~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGt-------iLsStGd 308 (361)
T KOG2445|consen 237 RSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGT-------ILSSTGD 308 (361)
T ss_pred CceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeee-------EEeecCC
Confidence 34799999999 999998731 24556779999999999999998 4444555
Q ss_pred cCceEEEE
Q 010754 468 IPYFLYWI 475 (502)
Q Consensus 468 ~~~~~iw~ 475 (502)
||.+++|-
T Consensus 309 DG~VRLWk 316 (361)
T KOG2445|consen 309 DGCVRLWK 316 (361)
T ss_pred Cceeeehh
Confidence 68888883
No 92
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.94 E-value=3.4e-25 Score=202.95 Aligned_cols=221 Identities=20% Similarity=0.331 Sum_probs=189.8
Q ss_pred CCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEEC
Q 010754 215 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY 294 (502)
Q Consensus 215 ~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~ 294 (502)
.++|.|++-+|+|.+|+.|+..|.+++|.+.+|..+. ....|-..|+|+.|+-||.+|++|+.
T Consensus 81 Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~-----------------v~~aHYQ~ITcL~fs~dgs~iiTgsk 143 (476)
T KOG0646|consen 81 PGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLN-----------------VLSAHYQSITCLKFSDDGSHIITGSK 143 (476)
T ss_pred ccceeeeecCCCceEEEeecccCcEEEEEeccccHHH-----------------HHHhhccceeEEEEeCCCcEEEecCC
Confidence 4789999999999999999899999999999987543 22456678999999999999999999
Q ss_pred CCeEEEEECC----------CceEEEecCccCCeEEEEEecCC--CEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEE
Q 010754 295 DGQARIWSTN----------GDLKCTLSKHKGPIFSLKWNKKG--DYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLD 362 (502)
Q Consensus 295 dg~i~iwd~~----------~~~~~~~~~~~~~v~~l~~~~~~--~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~ 362 (502)
||.|.+|.+. ....+.+..|.-+|+.+...+.| .+++|+|.|.++++||+..+..+.++. ...++.+
T Consensus 144 Dg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~-fp~si~a 222 (476)
T KOG0646|consen 144 DGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTIT-FPSSIKA 222 (476)
T ss_pred CccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEe-cCCccee
Confidence 9999999742 34677889999999999987754 689999999999999999999888776 4567888
Q ss_pred EEecCC-CEEEEEeCCCeEEEEEcCCC----------------cceEEEecCCC--cEEEEEEcCCCCEEEEEeCCCcEE
Q 010754 363 VDWRNN-VSFATSSTDNMIYVCKIGEN----------------RPIKTFAGHQG--EVNCVKWDPTGSLLASCSDDVTAK 423 (502)
Q Consensus 363 v~~~~~-~~~~~~~~d~~i~i~d~~~~----------------~~~~~~~~h~~--~i~~l~~sp~g~~las~s~dg~i~ 423 (502)
+...|. ..+.+|+.+|.|.+.++... ..+..+.||.+ .|+|++++-||.+|++|+.||.|+
T Consensus 223 v~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~Vc 302 (476)
T KOG0646|consen 223 VALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVC 302 (476)
T ss_pred EEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEE
Confidence 888764 55889999999999887542 24567889988 999999999999999999999999
Q ss_pred EEECCCCeeEEEeccCCCcEEEEEEccCCC
Q 010754 424 IWNMKQDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 424 iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
|||+.+.++++++....++|+.+.+.|--.
T Consensus 303 vWdi~S~Q~iRtl~~~kgpVtnL~i~~~~~ 332 (476)
T KOG0646|consen 303 VWDIYSKQCIRTLQTSKGPVTNLQINPLER 332 (476)
T ss_pred EEecchHHHHHHHhhhccccceeEeecccc
Confidence 999999999998886778999999966543
No 93
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=1.9e-25 Score=219.03 Aligned_cols=209 Identities=19% Similarity=0.333 Sum_probs=178.5
Q ss_pred eeeCCCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEE
Q 010754 201 FEIPNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTL 280 (502)
Q Consensus 201 ~~~~~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l 280 (502)
+.+...++..++||.+.|..+.|+. ..+|+++|.|.|||+|++....++. . ..|...|||+
T Consensus 355 f~f~ekP~~ef~GHt~DILDlSWSK-n~fLLSSSMDKTVRLWh~~~~~CL~-------------~-----F~HndfVTcV 415 (712)
T KOG0283|consen 355 FVFSEKPFCEFKGHTADILDLSWSK-NNFLLSSSMDKTVRLWHPGRKECLK-------------V-----FSHNDFVTCV 415 (712)
T ss_pred ccccccchhhhhccchhheeccccc-CCeeEeccccccEEeecCCCcceee-------------E-----EecCCeeEEE
Confidence 3455677889999999999999995 4589999999999999998776532 1 2357789999
Q ss_pred EECC-CCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeec---
Q 010754 281 DWNG-EGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH--- 356 (502)
Q Consensus 281 ~~s~-~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~--- 356 (502)
+|+| |.+++++|+-||.||||++....+.....-...|++++|.|+|++.++|+.+|.+++|+....+....+..+
T Consensus 416 aFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~ 495 (712)
T KOG0283|consen 416 AFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHN 495 (712)
T ss_pred EecccCCCcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeecc
Confidence 9999 889999999999999999988888777777799999999999999999999999999999888776655432
Q ss_pred -----cCCeEEEEecCCC--EEEEEeCCCeEEEEEcCCCcceEEEecCCC--cEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 010754 357 -----SGPTLDVDWRNNV--SFATSSTDNMIYVCKIGENRPIKTFAGHQG--EVNCVKWDPTGSLLASCSDDVTAKIWNM 427 (502)
Q Consensus 357 -----~~~v~~v~~~~~~--~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~--~i~~l~~sp~g~~las~s~dg~i~iwd~ 427 (502)
...|+.+.|.+.. .+++.+.|..|+|||.+....+..|+|+.. .-....|+.||++|+++++|..|+||+.
T Consensus 496 ~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~ 575 (712)
T KOG0283|consen 496 KKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKN 575 (712)
T ss_pred CccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeC
Confidence 2269999997644 488999999999999999999999998753 3446689999999999999999999997
Q ss_pred C
Q 010754 428 K 428 (502)
Q Consensus 428 ~ 428 (502)
.
T Consensus 576 ~ 576 (712)
T KOG0283|consen 576 D 576 (712)
T ss_pred C
Confidence 4
No 94
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=8.3e-25 Score=190.91 Aligned_cols=282 Identities=19% Similarity=0.315 Sum_probs=225.2
Q ss_pred ccccCCCCceeeeC----CCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEe------cCCCCc-----cC-C--
Q 010754 191 DIATTSASESFEIP----NSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWT------IADGTS-----NG-G-- 252 (502)
Q Consensus 191 ~~~~~~~~~~~~~~----~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~------~~~~~~-----~~-~-- 252 (502)
.+.+.+++....++ ...+..+.||.++|+++.|++.+.++++++.|++..||. +..... .. .
T Consensus 162 i~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e 241 (481)
T KOG0300|consen 162 ICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEE 241 (481)
T ss_pred ceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhh
Confidence 34455555544443 456788999999999999999999999999999999998 222100 00 0
Q ss_pred -------CCC--CCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEE
Q 010754 253 -------AQN--GPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLK 322 (502)
Q Consensus 253 -------~~~--~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~ 322 (502)
... .......++.+...+.+|...|.+..|-..|+.+++++.|.+..+||++ +..+..+.+|....+.++
T Consensus 242 ~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcs 321 (481)
T KOG0300|consen 242 HSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCS 321 (481)
T ss_pred cccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccc
Confidence 000 0111123344455666788999999999999999999999999999987 567788999999999999
Q ss_pred EecCCCEEEEEecCCeEEEEEcCCC-ceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCc-ceEEEecCCCc
Q 010754 323 WNKKGDYLLTGSCDKTAIVWDVKTE-EWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENR-PIKTFAGHQGE 400 (502)
Q Consensus 323 ~~~~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~-~~~~~~~h~~~ 400 (502)
-+|..+++++++.|.+.++||++.. ..+..|.+|...|+++.|..+..+++|+.|.+|++||+++.+ ++.++. ..++
T Consensus 322 tHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvKvWdLrNMRsplATIR-tdS~ 400 (481)
T KOG0300|consen 322 THPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDDRVVSGSDDRTVKVWDLRNMRSPLATIR-TDSP 400 (481)
T ss_pred cCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCCceeecCCCceEEEeeeccccCcceeee-cCCc
Confidence 9999999999999999999999843 356778999999999999999999999999999999999875 677776 5678
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEE----EeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 401 VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH----DLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 401 i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~----~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
++.++.+..+..||.--++..|++||++...+-+ .-++|..-|.+++|..+-. -..|++++.|..+.-|..
T Consensus 401 ~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW~eehp-----~cnLftcGFDR~v~gW~i 475 (481)
T KOG0300|consen 401 ANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAWLEEHP-----ACNLFTCGFDRMVAGWKI 475 (481)
T ss_pred cceeEeecCCceEEeccCCceEEEEecCCCccccCCcccccccceeeeeeeccccCc-----ccccccccccceeeeeEe
Confidence 9999999888899999999999999987554322 2248888999999998755 246788888888888865
Q ss_pred ee
Q 010754 477 SI 478 (502)
Q Consensus 477 ~~ 478 (502)
.+
T Consensus 476 n~ 477 (481)
T KOG0300|consen 476 NT 477 (481)
T ss_pred cc
Confidence 43
No 95
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=1.8e-24 Score=188.63 Aligned_cols=218 Identities=19% Similarity=0.316 Sum_probs=177.0
Q ss_pred CCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEEC
Q 010754 215 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY 294 (502)
Q Consensus 215 ~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~ 294 (502)
.+.|..+.|+|.+..|+.++.||++++|++....... ...|..++.+++|.+ ...+++|+-
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~------------------~~~~~~plL~c~F~d-~~~~~~G~~ 73 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKL------------------KFKHGAPLLDCAFAD-ESTIVTGGL 73 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhh------------------heecCCceeeeeccC-CceEEEecc
Confidence 4679999999998889999999999999998754221 123467899999987 467899999
Q ss_pred CCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEEEE
Q 010754 295 DGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATS 374 (502)
Q Consensus 295 dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~ 374 (502)
||.|+++|+++.....+..|..+|.||.+++....+++|+.|++|++||.+.......+.. ...|.+++.. ++.|++|
T Consensus 74 dg~vr~~Dln~~~~~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~-~kkVy~~~v~-g~~LvVg 151 (323)
T KOG1036|consen 74 DGQVRRYDLNTGNEDQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQ-GKKVYCMDVS-GNRLVVG 151 (323)
T ss_pred CceEEEEEecCCcceeeccCCCceEEEEeeccCCeEEEcccCccEEEEecccccccccccc-CceEEEEecc-CCEEEEe
Confidence 9999999999988888999999999999999889999999999999999987554444432 2256655543 4456777
Q ss_pred eCCCeEEEEEcCCCcc------------------------------------------------eEEEecCC--------
Q 010754 375 STDNMIYVCKIGENRP------------------------------------------------IKTFAGHQ-------- 398 (502)
Q Consensus 375 ~~d~~i~i~d~~~~~~------------------------------------------------~~~~~~h~-------- 398 (502)
+.+..+.+||+++... -..|+.|.
T Consensus 152 ~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~ 231 (323)
T KOG1036|consen 152 TSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEI 231 (323)
T ss_pred ecCceEEEEEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceE
Confidence 7777888888765321 12344453
Q ss_pred -CcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCC
Q 010754 399 -GEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 399 -~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
-+|++|+|+|-...||||+.||.|.+||+.+.+.+..+......|.+++|+.+|.
T Consensus 232 ~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~ 287 (323)
T KOG1036|consen 232 IYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDGS 287 (323)
T ss_pred EEEeceeEeccccceEEecCCCceEEEccCcchhhhhhccCCCCceEEEEeccCCC
Confidence 2699999999999999999999999999999999998887778899999999999
No 96
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=7.9e-25 Score=201.67 Aligned_cols=234 Identities=20% Similarity=0.305 Sum_probs=194.4
Q ss_pred CCceEEEEEcCCC-CeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE
Q 010754 215 TSEVCACAWSPAG-SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 293 (502)
Q Consensus 215 ~~~V~~~~~~p~~-~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~ 293 (502)
.++|.+++|+|.. .-+|+.+. -.+.||+..+..... ........|.+++|..||++|++|.
T Consensus 26 ~~~vssl~fsp~~P~d~aVt~S-~rvqly~~~~~~~~k-----------------~~srFk~~v~s~~fR~DG~LlaaGD 87 (487)
T KOG0310|consen 26 HNSVSSLCFSPKHPYDFAVTSS-VRVQLYSSVTRSVRK-----------------TFSRFKDVVYSVDFRSDGRLLAAGD 87 (487)
T ss_pred cCcceeEecCCCCCCceEEecc-cEEEEEecchhhhhh-----------------hHHhhccceeEEEeecCCeEEEccC
Confidence 3679999999953 34555544 579999977654221 1122245799999999999999999
Q ss_pred CCCeEEEEECCC-ceEEEecCccCCeEEEEEecCC-CEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCC--C
Q 010754 294 YDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN--V 369 (502)
Q Consensus 294 ~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~-~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~--~ 369 (502)
..|.|+|||... ..+..+..|..+|..+.|+|++ ..|++|+.|+.+++||+.+......+.+|.+.|.+.+|+|. .
T Consensus 88 ~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~h 167 (487)
T KOG0310|consen 88 ESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDH 167 (487)
T ss_pred CcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCe
Confidence 999999999654 2456788999999999999966 56778888999999999998876688999999999999775 4
Q ss_pred EEEEEeCCCeEEEEEcCCC-cceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCe-eEEEeccCCCcEEEEE
Q 010754 370 SFATSSTDNMIYVCKIGEN-RPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDK-YVHDLREHSKEIYTIR 447 (502)
Q Consensus 370 ~~~~~~~d~~i~i~d~~~~-~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~-~~~~~~~h~~~i~~v~ 447 (502)
.+++|+-||.|++||++.. ..+..+. |..+|..+.+-|.|..+|+++.. .|+|||+-+|. .+..+..|...|+|++
T Consensus 168 ivvtGsYDg~vrl~DtR~~~~~v~eln-hg~pVe~vl~lpsgs~iasAgGn-~vkVWDl~~G~qll~~~~~H~KtVTcL~ 245 (487)
T KOG0310|consen 168 IVVTGSYDGKVRLWDTRSLTSRVVELN-HGCPVESVLALPSGSLIASAGGN-SVKVWDLTTGGQLLTSMFNHNKTVTCLR 245 (487)
T ss_pred EEEecCCCceEEEEEeccCCceeEEec-CCCceeeEEEcCCCCEEEEcCCC-eEEEEEecCCceehhhhhcccceEEEEE
Confidence 5999999999999999988 6667776 99999999999999999999875 69999998655 4445555999999999
Q ss_pred EccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 448 WSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 448 ~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
+..+++ .|++++-|+.++++.
T Consensus 246 l~s~~~-------rLlS~sLD~~VKVfd 266 (487)
T KOG0310|consen 246 LASDST-------RLLSGSLDRHVKVFD 266 (487)
T ss_pred eecCCc-------eEeecccccceEEEE
Confidence 999987 899999999999997
No 97
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=3.6e-25 Score=193.21 Aligned_cols=228 Identities=26% Similarity=0.411 Sum_probs=196.7
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
.++.+.||.+.|+.++-.....++.+++.|.+.+||.++++.++ ....+|.+.|+++.|++.+
T Consensus 140 lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL-----------------~~Y~GH~GSVNsikfh~s~ 202 (481)
T KOG0300|consen 140 LVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACL-----------------ATYTGHTGSVNSIKFHNSG 202 (481)
T ss_pred ehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccce-----------------eeecccccceeeEEecccc
Confidence 35678899999999998887789999999999999999998854 2345678999999999999
Q ss_pred CEEEEEECCCeEEEEEC-------------------------------C------C----ceEEEecCccCCeEEEEEec
Q 010754 287 TLLATGSYDGQARIWST-------------------------------N------G----DLKCTLSKHKGPIFSLKWNK 325 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~-------------------------------~------~----~~~~~~~~~~~~v~~l~~~~ 325 (502)
.++++++.|++..||.. + + -.+..+.+|.+.|.+..|-.
T Consensus 203 ~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~ 282 (481)
T KOG0300|consen 203 LLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLA 282 (481)
T ss_pred ceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhc
Confidence 99999999999999941 0 0 03456788999999999999
Q ss_pred CCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCE-EEEEeCCCeEEEEEcCCC-cceEEEecCCCcEEE
Q 010754 326 KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGEN-RPIKTFAGHQGEVNC 403 (502)
Q Consensus 326 ~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~~~~d~~i~i~d~~~~-~~~~~~~~h~~~i~~ 403 (502)
.|+.+++++.|++..+||+.++..+..+.+|....+.++-+|..+ +++++.|.+.++||++.. ..+..|.||...|++
T Consensus 283 gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS 362 (481)
T KOG0300|consen 283 GGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTS 362 (481)
T ss_pred CcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeE
Confidence 999999999999999999999999999999999999998887665 567888999999999865 457889999999999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCe-eEEEeccCCCcEEEEEEccCCC
Q 010754 404 VKWDPTGSLLASCSDDVTAKIWNMKQDK-YVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 404 l~~sp~g~~las~s~dg~i~iwd~~~~~-~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
+.|.-+. .+++||+|.+|+|||+++.. ++.+++ ..++++.++.+.-+.
T Consensus 363 ~vF~~dd-~vVSgSDDrTvKvWdLrNMRsplATIR-tdS~~NRvavs~g~~ 411 (481)
T KOG0300|consen 363 VVFNTDD-RVVSGSDDRTVKVWDLRNMRSPLATIR-TDSPANRVAVSKGHP 411 (481)
T ss_pred EEEecCC-ceeecCCCceEEEeeeccccCcceeee-cCCccceeEeecCCc
Confidence 9998665 57899999999999998754 566766 566888998888776
No 98
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.94 E-value=5.2e-26 Score=198.91 Aligned_cols=195 Identities=19% Similarity=0.391 Sum_probs=170.3
Q ss_pred CCCeEEEEECCCCCEEEEEECCCeEEEEECC-CceEE--------EecCccCCeEEEEEecCCCEEEEEecCCeEEEEEc
Q 010754 274 SKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKC--------TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDV 344 (502)
Q Consensus 274 ~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~-~~~~~--------~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~ 344 (502)
...+.|..|+|||++|++|+-||.|.+|+.. ++... .+.-+..+|.|+.|+.+...+++|+.||.|++|.+
T Consensus 213 KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri 292 (508)
T KOG0275|consen 213 KSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRI 292 (508)
T ss_pred ccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEE
Confidence 4568899999999999999999999999954 33322 34457899999999999999999999999999999
Q ss_pred CCCceEEEEe-eccCCeEEEEecCC-CEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcE
Q 010754 345 KTEEWKQQFE-FHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTA 422 (502)
Q Consensus 345 ~~~~~~~~~~-~~~~~v~~v~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i 422 (502)
++|.|++.|. .|...|+++.|+.+ ..+++++.|.++++--+.++++++.|+||.+.|+...|.++|..++++|.||+|
T Consensus 293 ~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtv 372 (508)
T KOG0275|consen 293 ETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTV 372 (508)
T ss_pred ecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCccE
Confidence 9999999997 79999999999765 458999999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCCeeEEEec--cCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEE
Q 010754 423 KIWNMKQDKYVHDLR--EHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYW 474 (502)
Q Consensus 423 ~iwd~~~~~~~~~~~--~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw 474 (502)
+||+.++.+|+.+++ +..-+|.++..-|..+ ..++++..+.++.+-
T Consensus 373 kvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnp------eh~iVCNrsntv~im 420 (508)
T KOG0275|consen 373 KVWHGKTTECLSTFKPLGTDYPVNSVILLPKNP------EHFIVCNRSNTVYIM 420 (508)
T ss_pred EEecCcchhhhhhccCCCCcccceeEEEcCCCC------ceEEEEcCCCeEEEE
Confidence 999999999999998 4456799998888765 344555555555444
No 99
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.93 E-value=3.1e-25 Score=187.50 Aligned_cols=202 Identities=21% Similarity=0.390 Sum_probs=171.3
Q ss_pred cCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEE
Q 010754 213 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG 292 (502)
Q Consensus 213 ~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~ 292 (502)
.|+.-|.+|+|+.|.++|++|+.+..+||||++..+. ......+|.+.|..+-|....+.|++.
T Consensus 98 ~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~A----------------pp~E~~ghtg~Ir~v~wc~eD~~iLSS 161 (334)
T KOG0278|consen 98 EHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKA----------------PPKEISGHTGGIRTVLWCHEDKCILSS 161 (334)
T ss_pred hhhheeeeEEecccchhhhccchHHHhhhhhccCCCC----------------CchhhcCCCCcceeEEEeccCceEEee
Confidence 4788899999999999999999999999999986542 234456778899999999999999999
Q ss_pred ECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCC-CEE
Q 010754 293 SYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN-VSF 371 (502)
Q Consensus 293 ~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~-~~~ 371 (502)
+.|++||+||.+..........+.+|+++.++++|.+|.+ ...+.|.+||..+...++.+... ..|.+.+..|+ ..|
T Consensus 162 add~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTi-a~gssV~Fwdaksf~~lKs~k~P-~nV~SASL~P~k~~f 239 (334)
T KOG0278|consen 162 ADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTI-AYGSSVKFWDAKSFGLLKSYKMP-CNVESASLHPKKEFF 239 (334)
T ss_pred ccCCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEE-ecCceeEEeccccccceeeccCc-cccccccccCCCceE
Confidence 9999999999876554444456789999999999986655 56789999999998888877643 34666667665 568
Q ss_pred EEEeCCCeEEEEEcCCCcceEEE-ecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCee
Q 010754 372 ATSSTDNMIYVCKIGENRPIKTF-AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY 432 (502)
Q Consensus 372 ~~~~~d~~i~i~d~~~~~~~~~~-~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~ 432 (502)
++|+.|..++.||..++..+..+ ++|.++|.|+.|+|+|...|+||.||+|+||.+..++.
T Consensus 240 VaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~ 301 (334)
T KOG0278|consen 240 VAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGKT 301 (334)
T ss_pred EecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCCc
Confidence 88999999999999999999887 89999999999999999999999999999999876553
No 100
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.93 E-value=3.2e-24 Score=187.46 Aligned_cols=247 Identities=21% Similarity=0.350 Sum_probs=187.0
Q ss_pred CceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccC------CCC-CCCce-------------------
Q 010754 206 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNG------GAQ-NGPLN------------------- 259 (502)
Q Consensus 206 ~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~------~~~-~~~~~------------------- 259 (502)
-.+.+|+||.+.|++++|+.||+.|||++.|++|+||++.+-.... ... .++..
T Consensus 77 l~~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~ 156 (420)
T KOG2096|consen 77 LNVSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNK 156 (420)
T ss_pred hhhhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCE
Confidence 3467899999999999999999999999999999999987632110 000 01100
Q ss_pred eEEEeeec----------------CccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEE
Q 010754 260 VLVLKHVK----------------GRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKW 323 (502)
Q Consensus 260 ~~~~~~~~----------------~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~ 323 (502)
....+..+ .....|.-.|..+-...++.+|++++.|..|.+|++.|+.+.........-+..+.
T Consensus 157 l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lkGq~L~~idtnq~~n~~aav 236 (420)
T KOG2096|consen 157 LCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLKGQLLQSIDTNQSSNYDAAV 236 (420)
T ss_pred EEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecCCceeeeeccccccccceee
Confidence 00000000 01113445566666777889999999999999999999999888877777788899
Q ss_pred ecCCCEEEEEecCCeEEEEEcC---CCc-----eEEEEeeccCCeEEEEecCC-CEEEEEeCCCeEEEEEcCCC------
Q 010754 324 NKKGDYLLTGSCDKTAIVWDVK---TEE-----WKQQFEFHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGEN------ 388 (502)
Q Consensus 324 ~~~~~~l~s~~~d~~i~~wd~~---~~~-----~~~~~~~~~~~v~~v~~~~~-~~~~~~~~d~~i~i~d~~~~------ 388 (502)
+|+|+++++++..--|++|.+- .|. .+..+.+|...|..++|+++ .++++.+.||++++||++-.
T Consensus 237 SP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qD 316 (420)
T KOG2096|consen 237 SPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQD 316 (420)
T ss_pred CCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCC
Confidence 9999999999999999999862 222 34567889999999999876 55999999999999998531
Q ss_pred -cceEEEe----cCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEec-cCCCcEEEEEEccCCC
Q 010754 389 -RPIKTFA----GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR-EHSKEIYTIRWSPTGS 453 (502)
Q Consensus 389 -~~~~~~~----~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~-~h~~~i~~v~~sp~g~ 453 (502)
+.++.+. ...+....+.++|+|+.||.+.. ..|+++..++++..-.+. .|+..|.+|+|+|+|.
T Consensus 317 pk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~g-s~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~ 386 (420)
T KOG2096|consen 317 PKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFG-SDLKVFASEDGKDYPELEDIHSTTISSISYSSDGK 386 (420)
T ss_pred chHhhcCCcchhhcCCCceEEEeCCCCcEEEeecC-CceEEEEcccCccchhHHHhhcCceeeEEecCCCc
Confidence 2233321 12334458999999999987664 469999999998776665 7999999999999998
No 101
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.93 E-value=4.5e-24 Score=182.26 Aligned_cols=198 Identities=23% Similarity=0.386 Sum_probs=178.9
Q ss_pred ccCCCCeEEEEECCCCCEEEEEECCCeEEEEE-CCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCce
Q 010754 271 NEKSKDVTTLDWNGEGTLLATGSYDGQARIWS-TNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEW 349 (502)
Q Consensus 271 ~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd-~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~ 349 (502)
.+|..+++.+.++.+|.+|.+|+.|..+.||- .++..+-++.+|.+.|+|+..+.+.+++++|+.|.++++||+.+|++
T Consensus 7 ~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~ 86 (327)
T KOG0643|consen 7 QGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQ 86 (327)
T ss_pred ccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcE
Confidence 46788999999999999999999999999997 58999999999999999999999999999999999999999999999
Q ss_pred EEEEeeccCCeEEEEecCCCEEEEEeCC------CeEEEEEcC-------CCcceEEEecCCCcEEEEEEcCCCCEEEEE
Q 010754 350 KQQFEFHSGPTLDVDWRNNVSFATSSTD------NMIYVCKIG-------ENRPIKTFAGHQGEVNCVKWDPTGSLLASC 416 (502)
Q Consensus 350 ~~~~~~~~~~v~~v~~~~~~~~~~~~~d------~~i~i~d~~-------~~~~~~~~~~h~~~i~~l~~sp~g~~las~ 416 (502)
+..+. ...+|..+.|+.++.++..+.| +.|.++|++ ...|+..+..+.+.++.+-|+|-+.+|++|
T Consensus 87 la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~G 165 (327)
T KOG0643|consen 87 LATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAG 165 (327)
T ss_pred EEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEe
Confidence 98887 5668999999887776666554 468999998 456788888899999999999999999999
Q ss_pred eCCCcEEEEECCCCe-eEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 417 SDDVTAKIWNMKQDK-YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 417 s~dg~i~iwd~~~~~-~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
.+||.|.+||+++++ .+.....|+..|+.|.++||.. +++++|-|.+.++|+.
T Consensus 166 he~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T-------~FiT~s~Dttakl~D~ 219 (327)
T KOG0643|consen 166 HEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRT-------YFITGSKDTTAKLVDV 219 (327)
T ss_pred cCCCcEEEEEcccCceeeechhhhccccccccccCCcc-------eEEecccCccceeeec
Confidence 999999999999985 5566678999999999999999 8999999999999974
No 102
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.93 E-value=1.3e-24 Score=208.25 Aligned_cols=262 Identities=22% Similarity=0.330 Sum_probs=204.6
Q ss_pred EEeccCCCceEEEEEcCC-----------CCeEEEEeCCCcEEEEecCCCCccCCCCCCCce--------------eEEE
Q 010754 209 TILEGHTSEVCACAWSPA-----------GSLLASGSGDSTARIWTIADGTSNGGAQNGPLN--------------VLVL 263 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~-----------~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~--------------~~~~ 263 (502)
..+--|...|+.+.--|. ...++|++.|++||+|++..+........+.+. .+..
T Consensus 363 ~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d 442 (1080)
T KOG1408|consen 363 SSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHD 442 (1080)
T ss_pred eeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhh
Confidence 344567787877766551 125899999999999999864322111111000 0000
Q ss_pred ------eeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCC-ceEEEecCccCCeEEEEEec---CCCEEEEE
Q 010754 264 ------KHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNK---KGDYLLTG 333 (502)
Q Consensus 264 ------~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~---~~~~l~s~ 333 (502)
.............+.+++.+|+|++||+|..-|.++||++.. ........|...|.|+.|+. ..++|+++
T Consensus 443 ~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASa 522 (1080)
T KOG1408|consen 443 ASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASA 522 (1080)
T ss_pred ccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhc
Confidence 000011112345699999999999999999999999999764 56667889999999999985 34689999
Q ss_pred ecCCeEEEEEcC-CCceEEEEeeccCCeEEEEec----------------------------------------------
Q 010754 334 SCDKTAIVWDVK-TEEWKQQFEFHSGPTLDVDWR---------------------------------------------- 366 (502)
Q Consensus 334 ~~d~~i~~wd~~-~~~~~~~~~~~~~~v~~v~~~---------------------------------------------- 366 (502)
+.|+-|.+||+. ...+++++..|...|+++.|.
T Consensus 523 srdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm 602 (1080)
T KOG1408|consen 523 SRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDM 602 (1080)
T ss_pred cCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEe
Confidence 999999999984 445667777777777777663
Q ss_pred ---C-CCEEEEEeCCCeEEEEEcCCCcceEEEec---CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccC
Q 010754 367 ---N-NVSFATSSTDNMIYVCKIGENRPIKTFAG---HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREH 439 (502)
Q Consensus 367 ---~-~~~~~~~~~d~~i~i~d~~~~~~~~~~~~---h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h 439 (502)
| ...+++++.|+.|+||++.+++..+.|++ |.+....+..+|.|.|||+.+.|.++.++|..+++|+..+.+|
T Consensus 603 ~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GH 682 (1080)
T KOG1408|consen 603 AVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGH 682 (1080)
T ss_pred eeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCc
Confidence 1 23468999999999999999999999976 5677889999999999999999999999999999999999999
Q ss_pred CCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 440 SKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 440 ~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
+.-|+.+.|++|-. .|+.+++|+.|.+|...
T Consensus 683 sE~VTG~kF~nDCk-------HlISvsgDgCIFvW~lp 713 (1080)
T KOG1408|consen 683 SEAVTGVKFLNDCK-------HLISVSGDGCIFVWKLP 713 (1080)
T ss_pred chheeeeeecccch-------hheeecCCceEEEEECc
Confidence 99999999999988 78999999999999644
No 103
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.93 E-value=1.7e-24 Score=207.11 Aligned_cols=238 Identities=24% Similarity=0.355 Sum_probs=199.8
Q ss_pred eEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEE-EEECC-C
Q 010754 208 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTT-LDWNG-E 285 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-l~~s~-~ 285 (502)
-+.+.||...|..++..+ +..++++|.||++++|+-........ ....++.+.|.+ +++-+ +
T Consensus 7 s~~l~gH~~DVr~v~~~~-~~~i~s~sRd~t~~vw~~~~~~~l~~---------------~~~~~~~g~i~~~i~y~e~~ 70 (745)
T KOG0301|consen 7 SHELEGHKSDVRAVAVTD-GVCIISGSRDGTVKVWAKKGKQYLET---------------HAFEGPKGFIANSICYAESD 70 (745)
T ss_pred EEEeccCccchheeEecC-CeEEeecCCCCceeeeeccCcccccc---------------eecccCcceeeccceecccc
Confidence 467899999999999875 44899999999999999765543220 111223344444 67764 5
Q ss_pred CCEEEEEECCCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEE
Q 010754 286 GTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD 364 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~ 364 (502)
+-.+++|+.|++|.+|.+.+ .....+.+|...|.++....++. +++||.|.++++|- .+++...+.+|...|.++.
T Consensus 71 ~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~--~~~l~~~l~gH~asVWAv~ 147 (745)
T KOG0301|consen 71 KGRLVVGGMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWR--IGELVYSLQGHTASVWAVA 147 (745)
T ss_pred CcceEeecccceEEEEecCCCCchhhhhccccceeeeecCCcCc-eEecccccceEEec--chhhhcccCCcchheeeee
Confidence 55699999999999999764 67789999999999999877776 99999999999995 4666777999999999999
Q ss_pred ecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEE
Q 010754 365 WRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIY 444 (502)
Q Consensus 365 ~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~ 444 (502)
..+.+.+++|+.|.+|++|.- ++.+++|.+|.+.|.++++-+++ .|+||+.||.|+.|++ ++.++.++.+|+.-|+
T Consensus 148 ~l~e~~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vY 223 (745)
T KOG0301|consen 148 SLPENTYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVY 223 (745)
T ss_pred ecCCCcEEeccCcceeeeccC--CchhhhhccchhheeeeEEecCC-CeEeecCCceEEEEec-cCceeeeeeccceEEE
Confidence 999999999999999999985 77899999999999999998775 4679999999999998 8899999999999999
Q ss_pred EEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 445 TIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 445 ~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
+++..+++. .+++++.|++++||.
T Consensus 224 sis~~~~~~-------~Ivs~gEDrtlriW~ 247 (745)
T KOG0301|consen 224 SISMALSDG-------LIVSTGEDRTLRIWK 247 (745)
T ss_pred EEEecCCCC-------eEEEecCCceEEEee
Confidence 999666655 688888899999995
No 104
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.93 E-value=2.4e-24 Score=197.10 Aligned_cols=212 Identities=25% Similarity=0.451 Sum_probs=174.9
Q ss_pred ceEEeccCCCceEEEEEcCC-CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC-
Q 010754 207 DVTILEGHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG- 284 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~-~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~- 284 (502)
+-..|.||.+.-+.++|++. .-.|++|+.|++|++||+........ .......+.+|...|..++|++
T Consensus 169 Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~----------~~~p~~~~~~h~~~VeDV~~h~~ 238 (422)
T KOG0264|consen 169 PDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHTICLWDINAESKEDK----------VVDPKTIFSGHEDVVEDVAWHPL 238 (422)
T ss_pred CceEEEeecccccccccccccceeEeeccCCCcEEEEeccccccCCc----------cccceEEeecCCcceehhhcccc
Confidence 34589999998999999995 45899999999999999986543210 0113344567888999999999
Q ss_pred CCCEEEEEECCCeEEEEECCC---ceEEEecCccCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCC-ceEEEEeeccCC
Q 010754 285 EGTLLATGSYDGQARIWSTNG---DLKCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTE-EWKQQFEFHSGP 359 (502)
Q Consensus 285 ~g~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~v~~l~~~~-~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~ 359 (502)
+..++++++.|+.+.|||++. +......+|.++|.|++|+| ++..||||+.|++|.+||+|.. +++.++.+|...
T Consensus 239 h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~de 318 (422)
T KOG0264|consen 239 HEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDE 318 (422)
T ss_pred chhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcc
Confidence 567889999999999999873 44556778999999999999 4567889999999999999875 467889999999
Q ss_pred eEEEEecCC--CEEEEEeCCCeEEEEEcCCC--------------cceEEEecCCCcEEEEEEcCCCCE-EEEEeCCCcE
Q 010754 360 TLDVDWRNN--VSFATSSTDNMIYVCKIGEN--------------RPIKTFAGHQGEVNCVKWDPTGSL-LASCSDDVTA 422 (502)
Q Consensus 360 v~~v~~~~~--~~~~~~~~d~~i~i~d~~~~--------------~~~~~~~~h~~~i~~l~~sp~g~~-las~s~dg~i 422 (502)
|..|.|+|. ..+++++.|+.+.+||+..- ..+....||...|+.+.|+|+..+ |+|.++|+.+
T Consensus 319 v~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~L 398 (422)
T KOG0264|consen 319 VFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNIL 398 (422)
T ss_pred eEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceE
Confidence 999999885 45899999999999998642 234667789999999999998765 7888999999
Q ss_pred EEEECC
Q 010754 423 KIWNMK 428 (502)
Q Consensus 423 ~iwd~~ 428 (502)
.||.+.
T Consensus 399 qIW~~s 404 (422)
T KOG0264|consen 399 QIWQMA 404 (422)
T ss_pred EEeecc
Confidence 999875
No 105
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.92 E-value=2e-24 Score=187.99 Aligned_cols=206 Identities=21% Similarity=0.413 Sum_probs=171.5
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
.+++|..|.++|+++.|+|...+|++|+.|++|+++|+.+..... .+ ........|.++.|+|.|
T Consensus 164 vIRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKr-------------A~--K~~qd~~~vrsiSfHPsG 228 (430)
T KOG0640|consen 164 VIRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKR-------------AF--KVFQDTEPVRSISFHPSG 228 (430)
T ss_pred eEeehhhccCcccceeecchhheEEeccCCCeEEEEecccHHHHH-------------HH--HHhhccceeeeEeecCCC
Confidence 478999999999999999999999999999999999998643211 01 011224579999999999
Q ss_pred CEEEEEECCCeEEEEECCCceEEE----ecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEee-cc-CCe
Q 010754 287 TLLATGSYDGQARIWSTNGDLKCT----LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF-HS-GPT 360 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~~~~~~~----~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~-~~-~~v 360 (502)
.+|++|.....+++||++...... -..|++.|+++.+++.++..++++.||.|++||--+++|+.++.. |. ..|
T Consensus 229 efllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsev 308 (430)
T KOG0640|consen 229 EFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEV 308 (430)
T ss_pred ceEEEecCCCceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCcee
Confidence 999999999999999998654432 246899999999999999999999999999999999999888754 43 468
Q ss_pred EEEEecCCCE-EEEEeCCCeEEEEEcCCCcceEEEe--------------------------------------------
Q 010754 361 LDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFA-------------------------------------------- 395 (502)
Q Consensus 361 ~~v~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~-------------------------------------------- 395 (502)
.+..|..++. +++.+.|..+++|.+.+++++..+.
T Consensus 309 cSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~ 388 (430)
T KOG0640|consen 309 CSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRV 388 (430)
T ss_pred eeEEEccCCeEEeecCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhh
Confidence 8888876655 6778899999999999998876554
Q ss_pred -----cCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 010754 396 -----GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNM 427 (502)
Q Consensus 396 -----~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~ 427 (502)
+|++.+..+.-||.+.-+++||.|..+|+|--
T Consensus 389 ~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWyr 425 (430)
T KOG0640|consen 389 ALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWYR 425 (430)
T ss_pred hhcccCCCCCceEEEeCCCCCceeeecccceeeeeee
Confidence 67788888888888888889999988998864
No 106
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.92 E-value=2.6e-24 Score=208.27 Aligned_cols=252 Identities=21% Similarity=0.364 Sum_probs=195.7
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC-CCCEEEEEEC
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EGTLLATGSY 294 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~-~g~~l~s~~~ 294 (502)
+...+|..+++-..++.++. ..++||.+........ ..............+..+.|+. +.++||+++.
T Consensus 40 ~~~nAIs~nr~~~qiv~AGr-s~lklyai~~~~~~~~----------~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~ 108 (839)
T KOG0269|consen 40 AKANAISVNRDINQIVVAGR-SLLKLYAINPNDFSEK----------CNHRFKTKQNKFYSAADVKWGQLYSNLIATCST 108 (839)
T ss_pred cccceEeecCCcceeEEecc-cceeeEeeCcccCCcc----------eeeecccccceeeehhhcccccchhhhheeecC
Confidence 34556777888777888776 6899998876442211 0011011111223466778875 5679999999
Q ss_pred CCeEEEEECCC----ceEEEecCccCCeEEEEEecCC-CEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecC--
Q 010754 295 DGQARIWSTNG----DLKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-- 367 (502)
Q Consensus 295 dg~i~iwd~~~----~~~~~~~~~~~~v~~l~~~~~~-~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~-- 367 (502)
+|.|.+||+.. ++...+..|...+.++.|++.. ++|++|+.||+|++||++..+...++.+....|.+|.|+|
T Consensus 109 nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~ 188 (839)
T KOG0269|consen 109 NGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGY 188 (839)
T ss_pred CCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCC
Confidence 99999999764 4556788999999999999854 6888999999999999999999999999999999999966
Q ss_pred CCEEEEEeCCCeEEEEEcCCC-cceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCee--EEEeccCCCcEE
Q 010754 368 NVSFATSSTDNMIYVCKIGEN-RPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY--VHDLREHSKEIY 444 (502)
Q Consensus 368 ~~~~~~~~~d~~i~i~d~~~~-~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~--~~~~~~h~~~i~ 444 (502)
+..|+++...|.+.+||++.. ++...+.+|.++|.|+.|+|++.+||||+.|+.|+|||+.+.+. ++++. ...+|.
T Consensus 189 ~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tIn-Tiapv~ 267 (839)
T KOG0269|consen 189 GNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTIN-TIAPVG 267 (839)
T ss_pred CceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEe-ecceee
Confidence 567999999999999999976 56788999999999999999999999999999999999986543 33443 456899
Q ss_pred EEEEccCCCCCCCCCccEEEEee----cCceEEEEeeeEEEeeeccc
Q 010754 445 TIRWSPTGSGTNNPNQQLILARL----IPYFLYWICSIYFKYFGTTE 487 (502)
Q Consensus 445 ~v~~sp~g~~~~~~~~~l~las~----~~~~~iw~~~~~~~~~g~~~ 487 (502)
.|+|-|..+ . .||+. +-.|.||+..-.|-|...+.
T Consensus 268 rVkWRP~~~-------~-hLAtcsmv~dtsV~VWDvrRPYIP~~t~~ 306 (839)
T KOG0269|consen 268 RVKWRPARS-------Y-HLATCSMVVDTSVHVWDVRRPYIPYATFL 306 (839)
T ss_pred eeeeccCcc-------c-hhhhhhccccceEEEEeeccccccceeee
Confidence 999999987 2 33333 24588888766665555544
No 107
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=4.9e-25 Score=211.64 Aligned_cols=229 Identities=20% Similarity=0.414 Sum_probs=207.3
Q ss_pred eEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC
Q 010754 208 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~ 287 (502)
.+.+..|...|.|+..-..++.+++|+.|..+-+|.+.....+ ..+.+|...|.++.|++...
T Consensus 21 ~~~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i-----------------~S~~~hespIeSl~f~~~E~ 83 (825)
T KOG0267|consen 21 TREFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAI-----------------TSLTGHESPIESLTFDTSER 83 (825)
T ss_pred chhhhhhhhhhceeeeeccceeeccCCCceeeccccccCCchh-----------------heeeccCCcceeeecCcchh
Confidence 3456678899999998667899999999999999998654321 12457789999999999999
Q ss_pred EEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEec
Q 010754 288 LLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 366 (502)
Q Consensus 288 ~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~ 366 (502)
+|++|+.+|+|++||++ .+.+.++.+|...+.++.|+|-+.+++.|+.|+.+++||.+...|...+.+|...+..+.|.
T Consensus 84 LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~ls 163 (825)
T KOG0267|consen 84 LLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLS 163 (825)
T ss_pred hhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEeec
Confidence 99999999999999986 56788999999999999999999999999999999999999889999999999999999999
Q ss_pred CCCE-EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEE
Q 010754 367 NNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYT 445 (502)
Q Consensus 367 ~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~ 445 (502)
|++. ++.++.|..++|||...++.+..|.+|.+.+..+.|+|..-++++||.|++|++||+++...+.........|.+
T Consensus 164 P~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~~~~v~~ 243 (825)
T KOG0267|consen 164 PDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPETDGVRS 243 (825)
T ss_pred CCCceeeccCCcceeeeecccccccccccccccccccccccCchhhhhccCCCCceeeeeccceeEEeeccCCccCCcee
Confidence 9885 667777899999999999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEccCCC
Q 010754 446 IRWSPTGS 453 (502)
Q Consensus 446 v~~sp~g~ 453 (502)
++|+|+|.
T Consensus 244 ~~fn~~~~ 251 (825)
T KOG0267|consen 244 LAFNPDGK 251 (825)
T ss_pred eeecCCce
Confidence 99999998
No 108
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.92 E-value=3.7e-23 Score=197.95 Aligned_cols=229 Identities=24% Similarity=0.460 Sum_probs=189.5
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeE
Q 010754 219 CACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQA 298 (502)
Q Consensus 219 ~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i 298 (502)
.-+.|+ ..+.||.|.. ..|.+|+..++... .+..+. ...|+++.|+++|.+|++|..+|.|
T Consensus 181 nlldWs-s~n~laValg-~~vylW~~~s~~v~-----------~l~~~~------~~~vtSv~ws~~G~~LavG~~~g~v 241 (484)
T KOG0305|consen 181 NLLDWS-SANVLAVALG-QSVYLWSASSGSVT-----------ELCSFG------EELVTSVKWSPDGSHLAVGTSDGTV 241 (484)
T ss_pred hHhhcc-cCCeEEEEec-ceEEEEecCCCceE-----------EeEecC------CCceEEEEECCCCCEEEEeecCCeE
Confidence 346788 4557777754 57999998877521 111111 4679999999999999999999999
Q ss_pred EEEECC-CceEEEecC-ccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEE-EeeccCCeEEEEecCC-CEEEEE
Q 010754 299 RIWSTN-GDLKCTLSK-HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQ-FEFHSGPTLDVDWRNN-VSFATS 374 (502)
Q Consensus 299 ~iwd~~-~~~~~~~~~-~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~-~~~~~~~v~~v~~~~~-~~~~~~ 374 (502)
.|||.. .+....+.. |...|-+++|+ +..+.+|+.|+.|..+|++..+.... +.+|...|..+.|+++ ..+++|
T Consensus 242 ~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASG 319 (484)
T KOG0305|consen 242 QIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASG 319 (484)
T ss_pred EEEehhhccccccccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccC
Confidence 999965 455566666 99999999998 67899999999999999998876555 7889999999999765 568999
Q ss_pred eCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCC-CCEEEEEeC--CCcEEEEECCCCeeEEEeccCCCcEEEEEEccC
Q 010754 375 STDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT-GSLLASCSD--DVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPT 451 (502)
Q Consensus 375 ~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~-g~~las~s~--dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~ 451 (502)
+.|+.+.|||.....+...+..|.+.|.+++|+|- ..+||+|+. |++|++||..+++.+..+. ..+.|.+|.|++.
T Consensus 320 gnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vd-tgsQVcsL~Wsk~ 398 (484)
T KOG0305|consen 320 GNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVD-TGSQVCSLIWSKK 398 (484)
T ss_pred CCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccc-cCCceeeEEEcCC
Confidence 99999999999999999999999999999999994 668898765 9999999999999998887 4567999999999
Q ss_pred CCCCCCCCccEEEEee--cCceEEEEe
Q 010754 452 GSGTNNPNQQLILARL--IPYFLYWIC 476 (502)
Q Consensus 452 g~~~~~~~~~l~las~--~~~~~iw~~ 476 (502)
.. .++++-+ ...+.+|.+
T Consensus 399 ~k-------Ei~sthG~s~n~i~lw~~ 418 (484)
T KOG0305|consen 399 YK-------ELLSTHGYSENQITLWKY 418 (484)
T ss_pred CC-------EEEEecCCCCCcEEEEec
Confidence 86 5555443 366899965
No 109
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.92 E-value=6.6e-24 Score=201.72 Aligned_cols=249 Identities=17% Similarity=0.271 Sum_probs=210.3
Q ss_pred eEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEE-CCCC
Q 010754 208 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW-NGEG 286 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-s~~g 286 (502)
+..++.|.+.|..++...+++.|+++|.|.+|++|+...+.. ........|...|.|+++ .++.
T Consensus 66 ~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~---------------~c~stir~H~DYVkcla~~ak~~ 130 (735)
T KOG0308|consen 66 IASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNT---------------FCMSTIRTHKDYVKCLAYIAKNN 130 (735)
T ss_pred hhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcc---------------hhHhhhhcccchheeeeecccCc
Confidence 667889999999999999999999999999999999876531 022333457788999999 8889
Q ss_pred CEEEEEECCCeEEEEECCCc-----------eEEEec-CccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEe
Q 010754 287 TLLATGSYDGQARIWSTNGD-----------LKCTLS-KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFE 354 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~~~-----------~~~~~~-~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 354 (502)
.++|+|+.|+.|.+||++.. ....+. ++..+|++++.++.|..|++|+..+.+++||.++++.+..+.
T Consensus 131 ~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLr 210 (735)
T KOG0308|consen 131 ELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLR 210 (735)
T ss_pred eeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeee
Confidence 99999999999999998743 122333 788999999999999999999999999999999999999999
Q ss_pred eccCCeEEEEecCC-CEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeE
Q 010754 355 FHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYV 433 (502)
Q Consensus 355 ~~~~~v~~v~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~ 433 (502)
+|...|..+...++ ..+++++.||+|++||++..+++.++..|...|.++..+|+-..+.+|+.||.|..=|+++....
T Consensus 211 GHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~ 290 (735)
T KOG0308|consen 211 GHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPAKS 290 (735)
T ss_pred ccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCchhh
Confidence 99999999998665 57999999999999999999999999999999999999999999999999999999999985433
Q ss_pred EEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEeee
Q 010754 434 HDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICSI 478 (502)
Q Consensus 434 ~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~ 478 (502)
..+.....+|..+..+.... .+-.++.+..++-|-...
T Consensus 291 tlick~daPv~~l~~~~~~~-------~~WvtTtds~I~rW~~~~ 328 (735)
T KOG0308|consen 291 TLICKEDAPVLKLHLHEHDN-------SVWVTTTDSSIKRWKLEP 328 (735)
T ss_pred eEeecCCCchhhhhhccccC-------CceeeeccccceecCCcc
Confidence 33333556777877775544 346788899999995433
No 110
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.92 E-value=1.5e-22 Score=199.90 Aligned_cols=238 Identities=18% Similarity=0.367 Sum_probs=188.4
Q ss_pred ccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCC-ccCCCCCCCceeEEEe------------------ee-----c
Q 010754 212 EGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGT-SNGGAQNGPLNVLVLK------------------HV-----K 267 (502)
Q Consensus 212 ~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~-~~~~~~~~~~~~~~~~------------------~~-----~ 267 (502)
.+|+..-+.++|.|+|.+|++++.||.|++|+..... .-..+......+..+. .+ .
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~~~~ 89 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYSNHFLTGSEQNTVLRYKFPSGEED 89 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeecccceEEeeccceEEEeeCCCCCcc
Confidence 5799999999999999999999999999999876541 1111110000000000 00 0
Q ss_pred CccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCC
Q 010754 268 GRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT 346 (502)
Q Consensus 268 ~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~ 346 (502)
.......-++++++++.+|+++|.|+.|-.|++.+.. ......+.+|.++|.++.|+|++++|++.+.||.|++||+.+
T Consensus 90 ~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~ 169 (933)
T KOG1274|consen 90 TILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQD 169 (933)
T ss_pred ceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEccc
Confidence 0111234579999999999999999999999999965 567788999999999999999999999999999999999999
Q ss_pred CceEEEEeec--------cCCeEEEEecCC-CEEEEEeCCCeEEEEEcCCCcceEEEec--CCCcEEEEEEcCCCCEEEE
Q 010754 347 EEWKQQFEFH--------SGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFAG--HQGEVNCVKWDPTGSLLAS 415 (502)
Q Consensus 347 ~~~~~~~~~~--------~~~v~~v~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~--h~~~i~~l~~sp~g~~las 415 (502)
+.+..++.+- ...+..++|+|+ +.|++.+.|+.|.+|+.........+.. +...++.+.|+|+|+|||+
T Consensus 170 ~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAA 249 (933)
T KOG1274|consen 170 GILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAA 249 (933)
T ss_pred chhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEee
Confidence 8876665431 345778899887 7899999999999999999988777754 3445999999999999999
Q ss_pred EeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCC
Q 010754 416 CSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 416 ~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
++.||.|.|||+.+... ......|.+++|.|++.
T Consensus 250 s~~~g~I~vWnv~t~~~----~~~~~~Vc~~aw~p~~n 283 (933)
T KOG1274|consen 250 STLDGQILVWNVDTHER----HEFKRAVCCEAWKPNAN 283 (933)
T ss_pred eccCCcEEEEecccchh----ccccceeEEEecCCCCC
Confidence 99999999999998222 22345799999999987
No 111
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.91 E-value=3e-23 Score=175.09 Aligned_cols=222 Identities=25% Similarity=0.462 Sum_probs=176.3
Q ss_pred cccCCCCceeee-------CCCceEEeccCCCceEEEEEcC--CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEE
Q 010754 192 IATTSASESFEI-------PNSDVTILEGHTSEVCACAWSP--AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLV 262 (502)
Q Consensus 192 ~~~~~~~~~~~~-------~~~~~~~l~~H~~~V~~~~~~p--~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~ 262 (502)
+++.+.+..+++ +...+..|.||.++|..++|.. .|.+||+++.||.|.||.-.++...
T Consensus 26 lATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~------------ 93 (299)
T KOG1332|consen 26 LATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWT------------ 93 (299)
T ss_pred eeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchh------------
Confidence 445555555443 2245788999999999999975 6999999999999999998876432
Q ss_pred EeeecCccccCCCCeEEEEECCC--CCEEEEEECCCeEEEEECCCc----eEEEecCccCCeEEEEEecC---C------
Q 010754 263 LKHVKGRTNEKSKDVTTLDWNGE--GTLLATGSYDGQARIWSTNGD----LKCTLSKHKGPIFSLKWNKK---G------ 327 (502)
Q Consensus 263 ~~~~~~~~~~~~~~v~~l~~s~~--g~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~v~~l~~~~~---~------ 327 (502)
.......|...|++++|.|. |-.|++++.||.|.|.+.+.. .......|.-.|++++|.|- |
T Consensus 94 ---k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~ 170 (299)
T KOG1332|consen 94 ---KAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQG 170 (299)
T ss_pred ---hhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccC
Confidence 12233457888999999995 568999999999999987643 33456789999999999985 4
Q ss_pred -----CEEEEEecCCeEEEEEcCCCce--EEEEeeccCCeEEEEecCC-----CEEEEEeCCCeEEEEEcCCCc---ceE
Q 010754 328 -----DYLLTGSCDKTAIVWDVKTEEW--KQQFEFHSGPTLDVDWRNN-----VSFATSSTDNMIYVCKIGENR---PIK 392 (502)
Q Consensus 328 -----~~l~s~~~d~~i~~wd~~~~~~--~~~~~~~~~~v~~v~~~~~-----~~~~~~~~d~~i~i~d~~~~~---~~~ 392 (502)
+.|++|+.|+.|+||+...+.. .+++..|.+-|.+++|.|. ..+++|+.||++.||..+... ...
T Consensus 171 ~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~t 250 (299)
T KOG1332|consen 171 PAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKT 250 (299)
T ss_pred cccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCccccc
Confidence 5699999999999999987654 3457889999999999775 358999999999999887431 122
Q ss_pred EEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 010754 393 TFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK 428 (502)
Q Consensus 393 ~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~ 428 (502)
.+......+..+.||+.|++|+.++.|+.|.+|.-.
T Consensus 251 ll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~ 286 (299)
T KOG1332|consen 251 LLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKEN 286 (299)
T ss_pred ccccCCcceEEEEEeccccEEEEecCCcEEEEEEeC
Confidence 233345779999999999999999999999999754
No 112
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.91 E-value=1.1e-22 Score=177.76 Aligned_cols=235 Identities=18% Similarity=0.334 Sum_probs=179.2
Q ss_pred eEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCe
Q 010754 218 VCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQ 297 (502)
Q Consensus 218 V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~ 297 (502)
..||.|++.|.+||+|+.||.|.|||+.+.. ......+|..+|++++||++|+.|++++.|..
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~-----------------iar~lsaH~~pi~sl~WS~dgr~LltsS~D~s 88 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFR-----------------IARMLSAHVRPITSLCWSRDGRKLLTSSRDWS 88 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccc-----------------hhhhhhccccceeEEEecCCCCEeeeecCCce
Confidence 6899999999999999999999999998754 22334567789999999999999999999999
Q ss_pred EEEEECC-CceEEEecCccCCe-----------------------------------------------EEEEEecCCCE
Q 010754 298 ARIWSTN-GDLKCTLSKHKGPI-----------------------------------------------FSLKWNKKGDY 329 (502)
Q Consensus 298 i~iwd~~-~~~~~~~~~~~~~v-----------------------------------------------~~l~~~~~~~~ 329 (502)
|.+||+. +.+...+. ..++| .+..|.+.|++
T Consensus 89 i~lwDl~~gs~l~rir-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~y 167 (405)
T KOG1273|consen 89 IKLWDLLKGSPLKRIR-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKY 167 (405)
T ss_pred eEEEeccCCCceeEEE-ccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCE
Confidence 9999964 33222111 11111 12235667899
Q ss_pred EEEEecCCeEEEEEcCCCceEEEEeecc-CCeEEEEecC-CCEEEEEeCCCeEEEEEcCCCc---------ceEEEec--
Q 010754 330 LLTGSCDKTAIVWDVKTEEWKQQFEFHS-GPTLDVDWRN-NVSFATSSTDNMIYVCKIGENR---------PIKTFAG-- 396 (502)
Q Consensus 330 l~s~~~d~~i~~wd~~~~~~~~~~~~~~-~~v~~v~~~~-~~~~~~~~~d~~i~i~d~~~~~---------~~~~~~~-- 396 (502)
+++|...|.+.++|..+.+++..++... ..|..+.++. +..|+.-+.|+.|+.|++..-. +.+++..
T Consensus 168 IitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvV 247 (405)
T KOG1273|consen 168 IITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVV 247 (405)
T ss_pred EEEecCcceEEEEecchheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHH
Confidence 9999999999999999999999988776 6788888855 4558888999999999986311 1111110
Q ss_pred CCCcEEEEEEcCCCCEEEEEeC-CCcEEEEECCCCeeEEEeccCC-CcEEEEEEccCCCCCCCCCccEEEEeecCceEEE
Q 010754 397 HQGEVNCVKWDPTGSLLASCSD-DVTAKIWNMKQDKYVHDLREHS-KEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYW 474 (502)
Q Consensus 397 h~~~i~~l~~sp~g~~las~s~-dg~i~iwd~~~~~~~~~~~~h~-~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw 474 (502)
....=.+++|+.+|.|++.|+. -..++||.-..|.+++.+.|.. .....+.|+|-.+ ++..-.+|.+.+|
T Consensus 248 Nk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp--------~i~si~sg~v~iw 319 (405)
T KOG1273|consen 248 NKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRP--------IIASIASGVVYIW 319 (405)
T ss_pred hhhhhhheeecCCccEEEeccccceeEEEEecCCcceeeeecCCchhheeeccccccee--------eeeeccCCceEEE
Confidence 0122346889999999988775 4679999999999999998777 4678999999976 3444467889999
Q ss_pred Eeee
Q 010754 475 ICSI 478 (502)
Q Consensus 475 ~~~~ 478 (502)
....
T Consensus 320 ~~~~ 323 (405)
T KOG1273|consen 320 AVVQ 323 (405)
T ss_pred Eeec
Confidence 6443
No 113
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.91 E-value=1e-22 Score=181.91 Aligned_cols=253 Identities=19% Similarity=0.359 Sum_probs=180.9
Q ss_pred ccCCCceEEEEEcCCC--CeEEEEeCCCcEEEEecCCCCccCCCCCCCcee-EEEeeecCccccCCCCeEEEEECCCC-C
Q 010754 212 EGHTSEVCACAWSPAG--SLLASGSGDSTARIWTIADGTSNGGAQNGPLNV-LVLKHVKGRTNEKSKDVTTLDWNGEG-T 287 (502)
Q Consensus 212 ~~H~~~V~~~~~~p~~--~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~l~~s~~g-~ 287 (502)
-+|.+.|..+.-++-+ .+.|+=+..|.|+||++...-.. +....... ...........+|...-+.++|||-. .
T Consensus 148 i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~--l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g 225 (440)
T KOG0302|consen 148 IPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNA--LSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTG 225 (440)
T ss_pred cccccccceeeecccCCcceeeeecccCcEEEEEchhhhhh--hcCccccccccccCceEEecccCccceeeeccccccc
Confidence 4677778888777744 56777788999999998653111 00000000 01112233445677888999999932 2
Q ss_pred EEEEEECCCeEEEEECCCce----EEEecCccCCeEEEEEecCC-CEEEEEecCCeEEEEEcCCC---ceEEEEeeccCC
Q 010754 288 LLATGSYDGQARIWSTNGDL----KCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTE---EWKQQFEFHSGP 359 (502)
Q Consensus 288 ~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~~v~~l~~~~~~-~~l~s~~~d~~i~~wd~~~~---~~~~~~~~~~~~ 359 (502)
.|++|..-+.|++|...... ...+.+|+..|-.|+|+|.. ..|++|+.||+|+|||+|.+ .++.+ ..|.+.
T Consensus 226 ~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~-kAh~sD 304 (440)
T KOG0302|consen 226 RLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVST-KAHNSD 304 (440)
T ss_pred ccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEe-eccCCc
Confidence 47788888999999865432 23466799999999999965 68889999999999999988 33333 778899
Q ss_pred eEEEEecCCC-EEEEEeCCCeEEEEEcCC---CcceEEEecCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEECCCCee--
Q 010754 360 TLDVDWRNNV-SFATSSTDNMIYVCKIGE---NRPIKTFAGHQGEVNCVKWDPT-GSLLASCSDDVTAKIWNMKQDKY-- 432 (502)
Q Consensus 360 v~~v~~~~~~-~~~~~~~d~~i~i~d~~~---~~~~~~~~~h~~~i~~l~~sp~-g~~las~s~dg~i~iwd~~~~~~-- 432 (502)
|..|+|+... .|++|+.||+++|||+++ ++++..|+.|..+|++|.|+|. ...|++++.|..|.|||+....-
T Consensus 305 VNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D~e 384 (440)
T KOG0302|consen 305 VNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEADEE 384 (440)
T ss_pred eeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCChh
Confidence 9999997654 589999999999999985 4689999999999999999995 56788889999999999843110
Q ss_pred --------------EEEeccC--CCcEEEEEEccCCCCCCCCCccEEEEeecCceEEE
Q 010754 433 --------------VHDLREH--SKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYW 474 (502)
Q Consensus 433 --------------~~~~~~h--~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw 474 (502)
.+-+..| ...|..|.|++.-+ -+++.++-.-+.||
T Consensus 385 e~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiP-------G~lvsTa~dGfnVf 435 (440)
T KOG0302|consen 385 EIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIP-------GLLVSTAIDGFNVF 435 (440)
T ss_pred hhccccccchhcCCceeEEEecchhHhhhheeccCCC-------CeEEEecccceeEE
Confidence 0111224 34588899999876 23444444444554
No 114
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.91 E-value=4.2e-22 Score=174.17 Aligned_cols=238 Identities=19% Similarity=0.323 Sum_probs=183.8
Q ss_pred ccccCCCCceeee---C-CCceEEeccCCCceEEEEEcCCCC--eEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEe
Q 010754 191 DIATTSASESFEI---P-NSDVTILEGHTSEVCACAWSPAGS--LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLK 264 (502)
Q Consensus 191 ~~~~~~~~~~~~~---~-~~~~~~l~~H~~~V~~~~~~p~~~--~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~ 264 (502)
.+++++.++.+.+ + ...+..|-.|.+.|+++.|.+.-. .|++|+.||.|.+|+.....+
T Consensus 55 ~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~--------------- 119 (362)
T KOG0294|consen 55 YVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWEL--------------- 119 (362)
T ss_pred eEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEE---------------
Confidence 3455566655544 2 234667788999999999999754 899999999999999876542
Q ss_pred eecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEE
Q 010754 265 HVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWD 343 (502)
Q Consensus 265 ~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd 343 (502)
.....+|.+.|+.++.+|.|++.++.+.|+.+++|++- ++....+. -...-..+.|+|.|.+|+.++.+ .|-+|.
T Consensus 120 --~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~-L~~~at~v~w~~~Gd~F~v~~~~-~i~i~q 195 (362)
T KOG0294|consen 120 --LKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLN-LKNKATLVSWSPQGDHFVVSGRN-KIDIYQ 195 (362)
T ss_pred --eeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeec-cCCcceeeEEcCCCCEEEEEecc-EEEEEe
Confidence 23344567789999999999999999999999999954 43332222 22233459999999999888765 688898
Q ss_pred cCCCceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEE--cCCCCEEEEEeCCCc
Q 010754 344 VKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKW--DPTGSLLASCSDDVT 421 (502)
Q Consensus 344 ~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~--sp~g~~las~s~dg~ 421 (502)
+.+......+... ..+.++.|.....+++|+.++.|.+||.....+...+.+|...|..+.+ .|++.+|+|+|.||.
T Consensus 196 ~d~A~v~~~i~~~-~r~l~~~~l~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~ 274 (362)
T KOG0294|consen 196 LDNASVFREIENP-KRILCATFLDGSELLVGGDNEWISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGF 274 (362)
T ss_pred cccHhHhhhhhcc-ccceeeeecCCceEEEecCCceEEEeccCCCccceeeecchhheeeeEEEecCCceEEEEeccCce
Confidence 8776655544322 4588899999999999999999999999999999999999999999884 467889999999999
Q ss_pred EEEEECCCC-----eeEEEeccCCCcEEEEEEc
Q 010754 422 AKIWNMKQD-----KYVHDLREHSKEIYTIRWS 449 (502)
Q Consensus 422 i~iwd~~~~-----~~~~~~~~h~~~i~~v~~s 449 (502)
|+|||++.. +++..+.. ...++|+...
T Consensus 275 I~vWd~~~~~k~~~~~l~e~n~-~~RltCl~~~ 306 (362)
T KOG0294|consen 275 IKVWDIDMETKKRPTLLAELNT-NVRLTCLRVK 306 (362)
T ss_pred EEEEEccccccCCcceeEEeec-CCccceeeeh
Confidence 999999866 34444442 4456665544
No 115
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.90 E-value=1.5e-22 Score=197.70 Aligned_cols=270 Identities=18% Similarity=0.292 Sum_probs=209.9
Q ss_pred CCceEEeccCCCceEEEEEc-CCCCeEEEEeCCCcEEEEecCCCCcc---------------CCC-----CCCCce----
Q 010754 205 NSDVTILEGHTSEVCACAWS-PAGSLLASGSGDSTARIWTIADGTSN---------------GGA-----QNGPLN---- 259 (502)
Q Consensus 205 ~~~~~~l~~H~~~V~~~~~~-p~~~~l~sgs~dg~v~iw~~~~~~~~---------------~~~-----~~~~~~---- 259 (502)
++.++.-.||..+-.|+.|. .+|..+.+++.|++.+.+++...... ... ...++.
T Consensus 324 pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~ 403 (910)
T KOG1539|consen 324 PRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAF 403 (910)
T ss_pred chheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeec
Confidence 34466677999999999999 47899999999999998876431100 000 000000
Q ss_pred ----------eE----------EEe----eecCc------cccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCCceEE
Q 010754 260 ----------VL----------VLK----HVKGR------TNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKC 309 (502)
Q Consensus 260 ----------~~----------~~~----~~~~~------~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~ 309 (502)
+. ... ..-.+ .......+++++.++.|++.+.|+..|.|-+|+++.+...
T Consensus 404 ~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r 483 (910)
T KOG1539|consen 404 ENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHR 483 (910)
T ss_pred ccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeee
Confidence 00 000 00001 1112367999999999999999999999999999866555
Q ss_pred -Ee---cCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEe-cCCCEEEEEeCCCeEEEEE
Q 010754 310 -TL---SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW-RNNVSFATSSTDNMIYVCK 384 (502)
Q Consensus 310 -~~---~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~-~~~~~~~~~~~d~~i~i~d 384 (502)
.+ ..|+++|++++....++.+++++.+|.+.+||......+..+.... .+..+.+ .....++++..|-.|+++|
T Consensus 484 ~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~-~~~~iv~hr~s~l~a~~~ddf~I~vvD 562 (910)
T KOG1539|consen 484 KSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGS-SITGIVYHRVSDLLAIALDDFSIRVVD 562 (910)
T ss_pred cccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCC-CcceeeeeehhhhhhhhcCceeEEEEE
Confidence 34 3799999999999888999999999999999999888777776544 4445555 5567788999999999999
Q ss_pred cCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEE
Q 010754 385 IGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLIL 464 (502)
Q Consensus 385 ~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~l 464 (502)
..+.+.++.|.||.+.|+.++|||||++|++++.|++||+||+.++.++-.+. -..+++++.|||+|. .|.+
T Consensus 563 ~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~-vd~~~~sls~SPngD-------~LAT 634 (910)
T KOG1539|consen 563 VVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLL-VDSPCTSLSFSPNGD-------FLAT 634 (910)
T ss_pred chhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEe-cCCcceeeEECCCCC-------EEEE
Confidence 99999999999999999999999999999999999999999999999998776 667899999999999 5555
Q ss_pred Eeec-CceEEEEeeeEEEee
Q 010754 465 ARLI-PYFLYWICSIYFKYF 483 (502)
Q Consensus 465 as~~-~~~~iw~~~~~~~~~ 483 (502)
+..| ..+.+|.....|...
T Consensus 635 ~Hvd~~gIylWsNkslF~~v 654 (910)
T KOG1539|consen 635 VHVDQNGIYLWSNKSLFKSV 654 (910)
T ss_pred EEecCceEEEEEchhHheec
Confidence 5555 568999755555443
No 116
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.90 E-value=1.1e-22 Score=181.68 Aligned_cols=205 Identities=26% Similarity=0.452 Sum_probs=166.9
Q ss_pred ccCCCCeEEEEECCCC--CEEEEEECCCeEEEEECC-----------------CceEEEecCccCCeEEEEEecCC-CEE
Q 010754 271 NEKSKDVTTLDWNGEG--TLLATGSYDGQARIWSTN-----------------GDLKCTLSKHKGPIFSLKWNKKG-DYL 330 (502)
Q Consensus 271 ~~~~~~v~~l~~s~~g--~~l~s~~~dg~i~iwd~~-----------------~~~~~~~~~~~~~v~~l~~~~~~-~~l 330 (502)
.+|.+.+..+.-++-+ .+.++-+..|.|+||++. ...+.++.+|...=++|+|||-. ..|
T Consensus 148 i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~L 227 (440)
T KOG0302|consen 148 IPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRL 227 (440)
T ss_pred cccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeeccccccccc
Confidence 3455666666666644 456666778999999863 23566788899999999999933 358
Q ss_pred EEEecCCeEEEEEcCCCceEE---EEeeccCCeEEEEecC--CCEEEEEeCCCeEEEEEcCCCc--ceEEEecCCCcEEE
Q 010754 331 LTGSCDKTAIVWDVKTEEWKQ---QFEFHSGPTLDVDWRN--NVSFATSSTDNMIYVCKIGENR--PIKTFAGHQGEVNC 403 (502)
Q Consensus 331 ~s~~~d~~i~~wd~~~~~~~~---~~~~~~~~v~~v~~~~--~~~~~~~~~d~~i~i~d~~~~~--~~~~~~~h~~~i~~ 403 (502)
++|..-+.|++|...++.+.. .|.+|...|-+++|+| ++.|++|+.||+|+|||++.+. +....++|.+.|+.
T Consensus 228 lsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNV 307 (440)
T KOG0302|consen 228 LSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNV 307 (440)
T ss_pred ccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceee
Confidence 888888999999998887643 4667999999999987 4679999999999999999882 23334889999999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCC---CeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEeeeEE
Q 010754 404 VKWDPTGSLLASCSDDVTAKIWNMKQ---DKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICSIYF 480 (502)
Q Consensus 404 l~~sp~g~~las~s~dg~i~iwd~~~---~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~~~ 480 (502)
|.|+..-.+||+|++||+++|||+++ ++++..++-|..+|++|.|+|... ..++.++.|..+++|+.++.-
T Consensus 308 ISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~------s~iaasg~D~QitiWDlsvE~ 381 (440)
T KOG0302|consen 308 ISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHED------SVIAASGEDNQITIWDLSVEA 381 (440)
T ss_pred EEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccC------ceEEeccCCCcEEEEEeeccC
Confidence 99999888999999999999999975 567889999999999999999865 345667778999999988765
Q ss_pred E
Q 010754 481 K 481 (502)
Q Consensus 481 ~ 481 (502)
+
T Consensus 382 D 382 (440)
T KOG0302|consen 382 D 382 (440)
T ss_pred C
Confidence 5
No 117
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.90 E-value=2.9e-23 Score=201.06 Aligned_cols=222 Identities=23% Similarity=0.464 Sum_probs=179.1
Q ss_pred CceEEEEEcC-CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC-CCCEEEEEE
Q 010754 216 SEVCACAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EGTLLATGS 293 (502)
Q Consensus 216 ~~V~~~~~~p-~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~-~g~~l~s~~ 293 (502)
..+..+.|+. +.++|||++..|.|.+||+..... ......+..|...|++++|++ .-.+|++|+
T Consensus 88 ~S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~r--------------nk~l~~f~EH~Rs~~~ldfh~tep~iliSGS 153 (839)
T KOG0269|consen 88 YSAADVKWGQLYSNLIATCSTNGVISVWDLNKSIR--------------NKLLTVFNEHERSANKLDFHSTEPNILISGS 153 (839)
T ss_pred eehhhcccccchhhhheeecCCCcEEEEecCcccc--------------chhhhHhhhhccceeeeeeccCCccEEEecC
Confidence 3456788986 478999999999999999986311 112234566788999999998 456899999
Q ss_pred CCCeEEEEECC-CceEEEecCccCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCC-ceEEEEeeccCCeEEEEecCCC-
Q 010754 294 YDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTE-EWKQQFEFHSGPTLDVDWRNNV- 369 (502)
Q Consensus 294 ~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~-~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~v~~v~~~~~~- 369 (502)
.||.|++||++ .+...++.+....|..++|+| .+.+|+++...|.+.+||++.. ++...+..|.++|.++.|+|++
T Consensus 154 QDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~ 233 (839)
T KOG0269|consen 154 QDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNRE 233 (839)
T ss_pred CCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCc
Confidence 99999999987 455667777888999999999 5689999999999999999764 5677788999999999999865
Q ss_pred EEEEEeCCCeEEEEEcCCCcceEEEec-CCCcEEEEEEcCCCC-EEEEEeC--CCcEEEEECCCC-eeEEEeccCCCcEE
Q 010754 370 SFATSSTDNMIYVCKIGENRPIKTFAG-HQGEVNCVKWDPTGS-LLASCSD--DVTAKIWNMKQD-KYVHDLREHSKEIY 444 (502)
Q Consensus 370 ~~~~~~~d~~i~i~d~~~~~~~~~~~~-h~~~i~~l~~sp~g~-~las~s~--dg~i~iwd~~~~-~~~~~~~~h~~~i~ 444 (502)
.+|+||.|+.|+|||+.+++.-..... ...+|.+|+|-|... .||+|+. |-.|+|||++.. -+..++..|+..++
T Consensus 234 ~lATGGRDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt 313 (839)
T KOG0269|consen 234 WLATGGRDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVT 313 (839)
T ss_pred eeeecCCCccEEEEeccCCCccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCcccc
Confidence 488999999999999987654333322 357899999999865 4777775 788999999754 34577889999999
Q ss_pred EEEEccC
Q 010754 445 TIRWSPT 451 (502)
Q Consensus 445 ~v~~sp~ 451 (502)
.++|-..
T Consensus 314 ~i~W~~~ 320 (839)
T KOG0269|consen 314 GIAWDSG 320 (839)
T ss_pred ceeccCC
Confidence 9999873
No 118
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.90 E-value=8.8e-23 Score=189.13 Aligned_cols=201 Identities=21% Similarity=0.278 Sum_probs=159.9
Q ss_pred cccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCCce------EEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEE
Q 010754 270 TNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDL------KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWD 343 (502)
Q Consensus 270 ~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~------~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd 343 (502)
..+|+..|.++++.|.|..|++|+.|-.|++||+.+.- ..........|.++.|++.|..|++.+.....+|+|
T Consensus 163 l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~D 242 (641)
T KOG0772|consen 163 LKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLD 242 (641)
T ss_pred ccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeEEc
Confidence 34567889999999999999999999999999987532 122334567899999999999999999999999999
Q ss_pred cCCCceEEEE------------eeccCCeEEEEecCCC--EEEEEeCCCeEEEEEcCCCc-ceEEEe-----cCCCcEEE
Q 010754 344 VKTEEWKQQF------------EFHSGPTLDVDWRNNV--SFATSSTDNMIYVCKIGENR-PIKTFA-----GHQGEVNC 403 (502)
Q Consensus 344 ~~~~~~~~~~------------~~~~~~v~~v~~~~~~--~~~~~~~d~~i~i~d~~~~~-~~~~~~-----~h~~~i~~ 403 (502)
-....+.... .+|...+++.+|+|.. .|++++.||++++||+...+ .+..|. +..-+++.
T Consensus 243 RdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~ts 322 (641)
T KOG0772|consen 243 RDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTS 322 (641)
T ss_pred cCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCcee
Confidence 5544333322 3577789999998865 49999999999999998764 333343 22346899
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCe--eEE-EeccCCC--cEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 404 VKWDPTGSLLASCSDDVTAKIWNMKQDK--YVH-DLREHSK--EIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 404 l~~sp~g~~las~s~dg~i~iwd~~~~~--~~~-~~~~h~~--~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
++|+|+|++||+|+.||+|.+|+..+.. ... .-.+|.. .|++|+||+||+ +|+.-+.|+++++|++.
T Consensus 323 C~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~-------~LlSRg~D~tLKvWDLr 394 (641)
T KOG0772|consen 323 CAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGN-------YLLSRGFDDTLKVWDLR 394 (641)
T ss_pred eecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccc-------hhhhccCCCceeeeecc
Confidence 9999999999999999999999975433 222 2237776 899999999999 78888899999999743
No 119
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.90 E-value=1.3e-22 Score=187.39 Aligned_cols=235 Identities=17% Similarity=0.251 Sum_probs=196.5
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECC
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 295 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~d 295 (502)
.-|.+|.+.|||+.|++|+.-.++.|||+...... ++...........+++.+||.+..+++..|
T Consensus 466 nyiRSckL~pdgrtLivGGeastlsiWDLAapTpr---------------ikaeltssapaCyALa~spDakvcFsccsd 530 (705)
T KOG0639|consen 466 NYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPR---------------IKAELTSSAPACYALAISPDAKVCFSCCSD 530 (705)
T ss_pred cceeeeEecCCCceEEeccccceeeeeeccCCCcc---------------hhhhcCCcchhhhhhhcCCccceeeeeccC
Confidence 45789999999999999999999999999875421 122222223457889999999999999999
Q ss_pred CeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCC-EEEE
Q 010754 296 GQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV-SFAT 373 (502)
Q Consensus 296 g~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~-~~~~ 373 (502)
|.|.|||+.. ..+..+.+|...+.||..+++|..|.||+.|++|+.||+++++.++... ....|.++.+.|.+ .+++
T Consensus 531 GnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhd-F~SQIfSLg~cP~~dWlav 609 (705)
T KOG0639|consen 531 GNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHD-FSSQIFSLGYCPTGDWLAV 609 (705)
T ss_pred CcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhh-hhhhheecccCCCccceee
Confidence 9999999875 5677899999999999999999999999999999999999998777665 45678899887754 5778
Q ss_pred EeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCC
Q 010754 374 SSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 374 ~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
|-..+.+.+....... -..+.-|.+-|.++.|.+.|+++++.+.|+-+..|...-|..+...+ ..++|.++..|-|..
T Consensus 610 GMens~vevlh~skp~-kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqsk-E~SsVlsCDIS~ddk 687 (705)
T KOG0639|consen 610 GMENSNVEVLHTSKPE-KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISFDDK 687 (705)
T ss_pred ecccCcEEEEecCCcc-ceeecccccEEEEEEecccCceeeecCchhhhhhccCccccceeecc-ccCcceeeeeccCce
Confidence 8888888877765443 34566689999999999999999999999999999999998887776 556799999999877
Q ss_pred CCCCCCccEEEEeecCceEEEE
Q 010754 454 GTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 454 ~~~~~~~~l~las~~~~~~iw~ 475 (502)
+++++|++....+|-
T Consensus 688 -------yIVTGSGdkkATVYe 702 (705)
T KOG0639|consen 688 -------YIVTGSGDKKATVYE 702 (705)
T ss_pred -------EEEecCCCcceEEEE
Confidence 889999888777764
No 120
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89 E-value=1.1e-23 Score=202.37 Aligned_cols=222 Identities=23% Similarity=0.377 Sum_probs=192.7
Q ss_pred CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCC
Q 010754 226 AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG 305 (502)
Q Consensus 226 ~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~ 305 (502)
-+.+++.+..+..+++|+.... ..|...|.++..-..++.+++|+.|..+.+|....
T Consensus 3 ~~~~~m~~~~~t~Lr~~~~~~~-----------------------~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~k 59 (825)
T KOG0267|consen 3 GMEFLMKTKRATKLRVWDTREF-----------------------VAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGK 59 (825)
T ss_pred cccccceeeeeeccccccchhh-----------------------hhhhhhhceeeeeccceeeccCCCceeeccccccC
Confidence 3445556666677888886543 23456677887777889999999999999998653
Q ss_pred -ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCE-EEEEeCCCeEEEE
Q 010754 306 -DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS-FATSSTDNMIYVC 383 (502)
Q Consensus 306 -~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~~~~d~~i~i~ 383 (502)
.....+.+|.++|.++.|++....|++|+.+|+|++||+...+.++++.+|...+..+.|+|-.. ++.++.|..+.+|
T Consensus 60 p~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iw 139 (825)
T KOG0267|consen 60 PNAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIW 139 (825)
T ss_pred CchhheeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceeh
Confidence 34456899999999999999999999999999999999999999999999999999999998665 5678899999999
Q ss_pred EcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEE
Q 010754 384 KIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLI 463 (502)
Q Consensus 384 d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~ 463 (502)
|++...+...+.+|...+..+.|+|+|+++++|++|.+++|||...|+.+..|..|.+.+.++.|+|..- .+-
T Consensus 140 D~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~-------Lla 212 (825)
T KOG0267|consen 140 DIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEV-------LLA 212 (825)
T ss_pred hhhccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeecccccccccccccccccccccccCchhh-------hhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999876 445
Q ss_pred EEeecCceEEEEee
Q 010754 464 LARLIPYFLYWICS 477 (502)
Q Consensus 464 las~~~~~~iw~~~ 477 (502)
.++.|..+++|+..
T Consensus 213 ~Gs~d~tv~f~dle 226 (825)
T KOG0267|consen 213 PGSSDRTVRFWDLE 226 (825)
T ss_pred cCCCCceeeeeccc
Confidence 56677889999754
No 121
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.89 E-value=1.9e-22 Score=186.25 Aligned_cols=241 Identities=17% Similarity=0.311 Sum_probs=196.4
Q ss_pred cCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEE
Q 010754 213 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG 292 (502)
Q Consensus 213 ~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~ 292 (502)
.|..-|.++..+...+++.||+. |.|+|||+...... ..+..+..+ .....|.++...|||+.|++|
T Consensus 417 ~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~k-------~PvsqLdcl-----~rdnyiRSckL~pdgrtLivG 483 (705)
T KOG0639|consen 417 AHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPGNK-------SPVSQLDCL-----NRDNYIRSCKLLPDGRTLIVG 483 (705)
T ss_pred ccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCCCC-------Ccccccccc-----CcccceeeeEecCCCceEEec
Confidence 68888999999998999999987 88999999764211 111111111 124569999999999999999
Q ss_pred ECCCeEEEEECCCc---eEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCC-
Q 010754 293 SYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN- 368 (502)
Q Consensus 293 ~~dg~i~iwd~~~~---~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~- 368 (502)
++-.++.|||+... ....+....-..++++.+||.+..++|+.||.|.|||+.....++.|.+|...+.+|..+++
T Consensus 484 GeastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dG 563 (705)
T KOG0639|consen 484 GEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDG 563 (705)
T ss_pred cccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCC
Confidence 99999999997643 23344444556889999999999999999999999999999999999999999999999765
Q ss_pred CEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEE
Q 010754 369 VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRW 448 (502)
Q Consensus 369 ~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~ 448 (502)
..+.+|+-|++|+.||+++++.+.... ..+.|.++.++|++.+||.|-.++.+.|-...... -..+..|.+-|.++.|
T Consensus 564 tklWTGGlDntvRcWDlregrqlqqhd-F~SQIfSLg~cP~~dWlavGMens~vevlh~skp~-kyqlhlheScVLSlKF 641 (705)
T KOG0639|consen 564 TKLWTGGLDNTVRCWDLREGRQLQQHD-FSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPE-KYQLHLHESCVLSLKF 641 (705)
T ss_pred ceeecCCCccceeehhhhhhhhhhhhh-hhhhheecccCCCccceeeecccCcEEEEecCCcc-ceeecccccEEEEEEe
Confidence 559999999999999999998766554 45789999999999999999999998888765433 3456679999999999
Q ss_pred ccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 449 SPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 449 sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
.+.|. +++..+-|+.+..|.
T Consensus 642 a~cGk-------wfvStGkDnlLnawr 661 (705)
T KOG0639|consen 642 AYCGK-------WFVSTGKDNLLNAWR 661 (705)
T ss_pred cccCc-------eeeecCchhhhhhcc
Confidence 99998 667777777778884
No 122
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.89 E-value=1e-21 Score=170.82 Aligned_cols=195 Identities=23% Similarity=0.448 Sum_probs=159.2
Q ss_pred CCCeEEEEECC-CCCEEEEEECCCeEEEEECCCc---eEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCce
Q 010754 274 SKDVTTLDWNG-EGTLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEW 349 (502)
Q Consensus 274 ~~~v~~l~~s~-~g~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~ 349 (502)
...|.+|+||| ...++++|+.||+||+|+++.. .-.....|.++|.+++|+.+|..+++|+.|+.+++||+.+++
T Consensus 27 ~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q- 105 (347)
T KOG0647|consen 27 EDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQ- 105 (347)
T ss_pred ccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCC-
Confidence 56799999999 5667779999999999998742 223456789999999999999999999999999999999995
Q ss_pred EEEEeeccCCeEEEEecCCC---EEEEEeCCCeEEEEEcCCCcceEEEe-------------------------------
Q 010754 350 KQQFEFHSGPTLDVDWRNNV---SFATSSTDNMIYVCKIGENRPIKTFA------------------------------- 395 (502)
Q Consensus 350 ~~~~~~~~~~v~~v~~~~~~---~~~~~~~d~~i~i~d~~~~~~~~~~~------------------------------- 395 (502)
...+..|.++|..+.|.+.. .+++|+.|.+|+.||.+...++.++.
T Consensus 106 ~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~~pm~vVata~r~i~vynL~n 185 (347)
T KOG0647|consen 106 VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVLYPMAVVATAERHIAVYNLEN 185 (347)
T ss_pred eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhccCceeEEEecCCcEEEEEcCC
Confidence 56678899999999996543 58999999999999999877664432
Q ss_pred ------cCC----CcEEEEEEcCCCCEEEEEeCCCcEEEEECCCC--eeEEEeccCCC---------cEEEEEEccCCCC
Q 010754 396 ------GHQ----GEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD--KYVHDLREHSK---------EIYTIRWSPTGSG 454 (502)
Q Consensus 396 ------~h~----~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~--~~~~~~~~h~~---------~i~~v~~sp~g~~ 454 (502)
.+. -.+.||+..++....|.|+-+|.+-|..+..+ +.-..|+.|.. .|++|+|+|.-.
T Consensus 186 ~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hg- 264 (347)
T KOG0647|consen 186 PPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHG- 264 (347)
T ss_pred CcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccc-
Confidence 111 24778888888888899999999999998776 33345555652 478899999765
Q ss_pred CCCCCccEEEEeecCceEEEEe
Q 010754 455 TNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 455 ~~~~~~~l~las~~~~~~iw~~ 476 (502)
.|+++++||.+.+|+-
T Consensus 265 ------tlvTaGsDGtf~FWDk 280 (347)
T KOG0647|consen 265 ------TLVTAGSDGTFSFWDK 280 (347)
T ss_pred ------eEEEecCCceEEEecc
Confidence 7899999999999963
No 123
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.89 E-value=4.1e-21 Score=168.57 Aligned_cols=204 Identities=19% Similarity=0.313 Sum_probs=167.4
Q ss_pred CCCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEEC
Q 010754 204 PNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN 283 (502)
Q Consensus 204 ~~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s 283 (502)
.++-++.+.||...|..++.+|-+..+++++.|++|++||+...++...+. ...-..++|.
T Consensus 89 dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~-------------------~~~~pi~AfD 149 (311)
T KOG1446|consen 89 DNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLN-------------------LSGRPIAAFD 149 (311)
T ss_pred cCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEe-------------------cCCCcceeEC
Confidence 456689999999999999999999999999999999999998665432111 1223467899
Q ss_pred CCCCEEEEEECCCeEEEEECC---CceEEEec---CccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeecc
Q 010754 284 GEGTLLATGSYDGQARIWSTN---GDLKCTLS---KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS 357 (502)
Q Consensus 284 ~~g~~l~s~~~dg~i~iwd~~---~~~~~~~~---~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~ 357 (502)
|.|-++|++...+.|++||++ .+...++. ........|.|+|+|++|+.+...+.+++.|.-+|..+.++..+.
T Consensus 150 p~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~ 229 (311)
T KOG1446|consen 150 PEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYP 229 (311)
T ss_pred CCCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeecc
Confidence 999999999988899999976 33333333 336678999999999999999999999999999999999998866
Q ss_pred CCe---EEEEecCCCEEE-EEeCCCeEEEEEcCCCcceEEEec-CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 010754 358 GPT---LDVDWRNNVSFA-TSSTDNMIYVCKIGENRPIKTFAG-HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK 428 (502)
Q Consensus 358 ~~v---~~v~~~~~~~~~-~~~~d~~i~i~d~~~~~~~~~~~~-h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~ 428 (502)
..- ...+|.|++.|+ +|+.||+|.+|++.++..+..+.+ +.+++.++.|+|.-.+++|++. .+-+|=..
T Consensus 230 ~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~s--~l~fw~p~ 303 (311)
T KOG1446|consen 230 NAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSASS--NLVFWLPD 303 (311)
T ss_pred CCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeecCc--eEEEEecc
Confidence 543 678888887755 556679999999999999999998 6899999999998877777754 67788543
No 124
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.89 E-value=5.5e-22 Score=187.01 Aligned_cols=253 Identities=23% Similarity=0.351 Sum_probs=200.0
Q ss_pred eeeCCCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEE
Q 010754 201 FEIPNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTL 280 (502)
Q Consensus 201 ~~~~~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l 280 (502)
-.+|......++||++.|.|+...|.|.+|++|+.||+|+||.+.++.++.... ....|.|+
T Consensus 386 rPFPt~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~------------------~d~~I~~v 447 (733)
T KOG0650|consen 386 RPFPTRCALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQ------------------FDSEIRSV 447 (733)
T ss_pred CCCcceeeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEe------------------ecceeEEE
Confidence 345667778899999999999999999999999999999999999987643211 13469999
Q ss_pred EECCCCC--EEEEEECCCeEEE---------------------------------EECC-----CceEEEecCccCCeEE
Q 010754 281 DWNGEGT--LLATGSYDGQARI---------------------------------WSTN-----GDLKCTLSKHKGPIFS 320 (502)
Q Consensus 281 ~~s~~g~--~l~s~~~dg~i~i---------------------------------wd~~-----~~~~~~~~~~~~~v~~ 320 (502)
+|+|.+. .||++.... +.| |... ..-++....|...|..
T Consensus 448 aw~P~~~~~vLAvA~~~~-~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~ 526 (733)
T KOG0650|consen 448 AWNPLSDLCVLAVAVGEC-VLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQ 526 (733)
T ss_pred EecCCCCceeEEEEecCc-eEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccce
Confidence 9999765 444443322 333 3211 0113345568889999
Q ss_pred EEEecCCCEEEEEecC---CeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecC
Q 010754 321 LKWNKKGDYLLTGSCD---KTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGH 397 (502)
Q Consensus 321 l~~~~~~~~l~s~~~d---~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h 397 (502)
+.|+..|.||++...+ ..|.|+++.......-|....+.+.++.|+|..-.+..+....|+|||+.....++++...
T Consensus 527 vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~~vRiYdL~kqelvKkL~tg 606 (733)
T KOG0650|consen 527 VTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQRSVRIYDLSKQELVKKLLTG 606 (733)
T ss_pred eeeecCCceEEEeccCCCcceEEEEecccccccCchhhcCCceeEEEecCCCceEEEEeccceEEEehhHHHHHHHHhcC
Confidence 9999999999987664 4799999987776666777788999999999887777778899999999998888888777
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCC-eeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 398 QGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD-KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 398 ~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~-~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
...|..++.+|.|.-|+.|+.|+.+..+|+.-. ++.++++.|...+++|+||+.-. .+.+|+-|+++.|+..
T Consensus 607 ~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryP-------Lfas~sdDgtv~Vfhg 679 (733)
T KOG0650|consen 607 SKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYP-------LFASGSDDGTVIVFHG 679 (733)
T ss_pred CeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccc-------eeeeecCCCcEEEEee
Confidence 788999999999999999999999999999754 67788889999999999999987 3444445577777754
Q ss_pred eeE
Q 010754 477 SIY 479 (502)
Q Consensus 477 ~~~ 479 (502)
.++
T Consensus 680 ~VY 682 (733)
T KOG0650|consen 680 MVY 682 (733)
T ss_pred eee
Confidence 444
No 125
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.89 E-value=1.4e-21 Score=169.29 Aligned_cols=197 Identities=22% Similarity=0.398 Sum_probs=161.1
Q ss_pred cCCCCeEEEEECC-CCCEEEEEECCCeEEEEECCCce-----------EE-----EecCccCCeEEEEEec-CCCEEEEE
Q 010754 272 EKSKDVTTLDWNG-EGTLLATGSYDGQARIWSTNGDL-----------KC-----TLSKHKGPIFSLKWNK-KGDYLLTG 333 (502)
Q Consensus 272 ~~~~~v~~l~~s~-~g~~l~s~~~dg~i~iwd~~~~~-----------~~-----~~~~~~~~v~~l~~~~-~~~~l~s~ 333 (502)
.|.+.|.++...+ .|+++++|+.||.|.+||++... ++ .-.+|+-.|.++.|-| +.-.|.++
T Consensus 41 ~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtss 120 (397)
T KOG4283|consen 41 PHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSS 120 (397)
T ss_pred cCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecc
Confidence 4567799999887 78999999999999999976321 11 1235888999999999 55688899
Q ss_pred ecCCeEEEEEcCCCceEEEEeeccCCeEEEEecC----CCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCC
Q 010754 334 SCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN----NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT 409 (502)
Q Consensus 334 ~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~----~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~ 409 (502)
+.|.++++||..+.+....|. -.+.|..-+|+| ...+++|..+-.|+++|+.+|....++.||.+.|.++.|+|.
T Consensus 121 SFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~ 199 (397)
T KOG4283|consen 121 SFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPS 199 (397)
T ss_pred cccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccC
Confidence 999999999999988777766 345666667765 334778888889999999999999999999999999999998
Q ss_pred CCE-EEEEeCCCcEEEEECCCC-eeEEEe--------------ccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEE
Q 010754 410 GSL-LASCSDDVTAKIWNMKQD-KYVHDL--------------REHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLY 473 (502)
Q Consensus 410 g~~-las~s~dg~i~iwd~~~~-~~~~~~--------------~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~i 473 (502)
..+ ||+|+.||.|++||++.. .|+..+ .+|.+.+.+++|+.+|. ++.+.+.+..+++
T Consensus 200 ~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~-------~l~~~gtd~r~r~ 272 (397)
T KOG4283|consen 200 SEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDAR-------YLASCGTDDRIRV 272 (397)
T ss_pred ceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccch-------hhhhccCccceEE
Confidence 775 789999999999999754 233222 25778899999999998 7888889999999
Q ss_pred EEe
Q 010754 474 WIC 476 (502)
Q Consensus 474 w~~ 476 (502)
|.-
T Consensus 273 wn~ 275 (397)
T KOG4283|consen 273 WNM 275 (397)
T ss_pred eec
Confidence 963
No 126
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.89 E-value=1.7e-21 Score=177.83 Aligned_cols=254 Identities=22% Similarity=0.348 Sum_probs=180.2
Q ss_pred eEEEEEcC-------CCCeEEEEeCCCcEEEEecCCCCccC-CCCCCCceeEE---EeeecCccccCCCCeEEEEECCC-
Q 010754 218 VCACAWSP-------AGSLLASGSGDSTARIWTIADGTSNG-GAQNGPLNVLV---LKHVKGRTNEKSKDVTTLDWNGE- 285 (502)
Q Consensus 218 V~~~~~~p-------~~~~l~sgs~dg~v~iw~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~v~~l~~s~~- 285 (502)
-.|++|.- .|+++|.|+.|..|.|||+.-...+. .+..+...... .........+|+..|.+|+|+..
T Consensus 176 PLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~ 255 (463)
T KOG0270|consen 176 PLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNF 255 (463)
T ss_pred chhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhcccc
Confidence 36777753 25799999999999999986432111 00000000000 00011123367888999999985
Q ss_pred CCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecC-CCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEE
Q 010754 286 GTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKK-GDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDV 363 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~-~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v 363 (502)
.+.||+|+.|.+|++||+. +++..++..|...|.++.|+|. ..+|++|+.|++|.+.|.|........-...+.|-.+
T Consensus 256 ~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv 335 (463)
T KOG0270|consen 256 RNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKV 335 (463)
T ss_pred ceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEE
Confidence 4589999999999999987 5777788889999999999995 4789999999999999998543333333356678899
Q ss_pred EecC--CCEEEEEeCCCeEEEEEcCCC-cceEEEecCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEECCCCee--EEEec
Q 010754 364 DWRN--NVSFATSSTDNMIYVCKIGEN-RPIKTFAGHQGEVNCVKWDPT-GSLLASCSDDVTAKIWNMKQDKY--VHDLR 437 (502)
Q Consensus 364 ~~~~--~~~~~~~~~d~~i~i~d~~~~-~~~~~~~~h~~~i~~l~~sp~-g~~las~s~dg~i~iwd~~~~~~--~~~~~ 437 (502)
.|.+ ...|+++..||+++-+|+|+. +++.++.+|.++|.+|++++. ..+|++++.|++|++|++..... +..-.
T Consensus 336 ~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~ 415 (463)
T KOG0270|consen 336 AWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHS 415 (463)
T ss_pred EecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCccccccc
Confidence 9965 456889999999999999986 899999999999999999985 45789999999999999864433 21111
Q ss_pred cCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 438 EHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 438 ~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
..-+...|.++.|+-. ..+..++.-+.+++|+..
T Consensus 416 ~~~~rl~c~~~~~~~a------~~la~GG~k~~~~vwd~~ 449 (463)
T KOG0270|consen 416 FKLGRLHCFALDPDVA------FTLAFGGEKAVLRVWDIF 449 (463)
T ss_pred ccccceeecccCCCcc------eEEEecCccceEEEeecc
Confidence 1112356667777755 122333333458888753
No 127
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.88 E-value=5.3e-21 Score=175.66 Aligned_cols=194 Identities=21% Similarity=0.268 Sum_probs=170.3
Q ss_pred CCCeEEEEECCCCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcC-------
Q 010754 274 SKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK------- 345 (502)
Q Consensus 274 ~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~------- 345 (502)
.+.|.+++-+|+|.+|+.|+..|.|++|.+. |.++..+..|-..|+|+.|+.||.+|++|+.||.|.+|++.
T Consensus 81 Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~ 160 (476)
T KOG0646|consen 81 PGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADN 160 (476)
T ss_pred ccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeeccccc
Confidence 4679999999999999999999999999987 56777888999999999999999999999999999999762
Q ss_pred --CCceEEEEeeccCCeEEEEecC---CCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCC
Q 010754 346 --TEEWKQQFEFHSGPTLDVDWRN---NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDV 420 (502)
Q Consensus 346 --~~~~~~~~~~~~~~v~~v~~~~---~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg 420 (502)
+-++++.|..|.-+|+++...+ +.++++++.|.++++||+..+..+.++. ....+.+++.+|-++.+..|+.+|
T Consensus 161 ~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~-fp~si~av~lDpae~~~yiGt~~G 239 (476)
T KOG0646|consen 161 DHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTIT-FPSSIKAVALDPAERVVYIGTEEG 239 (476)
T ss_pred CCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEe-cCCcceeEEEcccccEEEecCCcc
Confidence 3457788889999999998854 4679999999999999999999888876 567899999999999999999999
Q ss_pred cEEEEECCCC----------------eeEEEeccCCC--cEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 421 TAKIWNMKQD----------------KYVHDLREHSK--EIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 421 ~i~iwd~~~~----------------~~~~~~~~h~~--~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
.|.+.++.+. ..+..+.+|.. +|++++.+-||+ .|+.|+.|+.+++|+
T Consensus 240 ~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~Dgt-------lLlSGd~dg~VcvWd 305 (476)
T KOG0646|consen 240 KIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGT-------LLLSGDEDGKVCVWD 305 (476)
T ss_pred eEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCcc-------EEEeeCCCCCEEEEe
Confidence 9999887432 34566778987 999999999999 777777789999995
No 128
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.88 E-value=1.7e-21 Score=185.15 Aligned_cols=250 Identities=24% Similarity=0.356 Sum_probs=183.3
Q ss_pred CceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC
Q 010754 206 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 206 ~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~ 285 (502)
..+.....|...|..+.|-|....|++++.|.++++||+..+.+... ....+|...|.+++|.|.
T Consensus 91 ~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~---------------~~~~GH~~SvkS~cf~~~ 155 (720)
T KOG0321|consen 91 RQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGG---------------RLNLGHTGSVKSECFMPT 155 (720)
T ss_pred hhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecc---------------eeecccccccchhhhccC
Confidence 34566678999999999999778999999999999999998764321 124567889999999995
Q ss_pred C-CEEEEEECCCeEEEEECCCceE----------------------------EEecCccCCeEE---EEEecCCCEEEEE
Q 010754 286 G-TLLATGSYDGQARIWSTNGDLK----------------------------CTLSKHKGPIFS---LKWNKKGDYLLTG 333 (502)
Q Consensus 286 g-~~l~s~~~dg~i~iwd~~~~~~----------------------------~~~~~~~~~v~~---l~~~~~~~~l~s~ 333 (502)
. ..|++|+.||.|.|||++...+ .....+...|.+ +.+..|...|+++
T Consensus 156 n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSa 235 (720)
T KOG0321|consen 156 NPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASA 235 (720)
T ss_pred CCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeec
Confidence 4 5889999999999999642110 011123334554 5566788899988
Q ss_pred ec-CCeEEEEEcCCCceEEE--------Eeec---cCCeEEEEe-cCCCEEEEEeCCCeEEEEEcCCC--cceEEEecCC
Q 010754 334 SC-DKTAIVWDVKTEEWKQQ--------FEFH---SGPTLDVDW-RNNVSFATSSTDNMIYVCKIGEN--RPIKTFAGHQ 398 (502)
Q Consensus 334 ~~-d~~i~~wd~~~~~~~~~--------~~~~---~~~v~~v~~-~~~~~~~~~~~d~~i~i~d~~~~--~~~~~~~~h~ 398 (502)
+. |+.|+|||++....... +..+ .-.+.++.. +.+..+.+.+.|+.|++|++..- .++..+.++.
T Consensus 236 ga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~ 315 (720)
T KOG0321|consen 236 GAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKL 315 (720)
T ss_pred cCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCchhhccCcc
Confidence 87 99999999987653322 1112 123444444 34556666677999999999865 3566666553
Q ss_pred Cc--EEEEEEcCCCCEEEEEeCCCcEEEEECCCCee-EEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 399 GE--VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY-VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 399 ~~--i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~-~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
.. -..-..+|++.+|++|+.|...++|.+.+... ...+.+|.-.|++++|.|... ..+++++.|..+++|.
T Consensus 316 ~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~------t~v~TcSdD~~~kiW~ 389 (720)
T KOG0321|consen 316 NSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSAT------TPVATCSDDFRVKIWR 389 (720)
T ss_pred cceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeeccccC------CCceeeccCcceEEEe
Confidence 22 12234789999999999999999999987653 455669999999999998654 3568888889999997
Q ss_pred e
Q 010754 476 C 476 (502)
Q Consensus 476 ~ 476 (502)
.
T Consensus 390 l 390 (720)
T KOG0321|consen 390 L 390 (720)
T ss_pred c
Confidence 5
No 129
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.88 E-value=5.9e-21 Score=174.97 Aligned_cols=248 Identities=12% Similarity=0.199 Sum_probs=196.4
Q ss_pred eEEeccCCCceEEEEEcCCCC-eEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 208 VTILEGHTSEVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~-~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
++.+.--..+|.+++|.|+|. .+++++.-..+..||+.+.+... ++.+.+. ....+.....++++
T Consensus 250 lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k-----------~~~~~g~---e~~~~e~FeVShd~ 315 (514)
T KOG2055|consen 250 LQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTK-----------LKPPYGV---EEKSMERFEVSHDS 315 (514)
T ss_pred heeeeeccCccceeeecCCCceEEEecccceEEEEeecccccccc-----------ccCCCCc---ccchhheeEecCCC
Confidence 444444567899999999988 88888888999999998876432 1111111 13457888899999
Q ss_pred CEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccC-CeEEEEe
Q 010754 287 TLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSG-PTLDVDW 365 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~-~v~~v~~ 365 (502)
++|+..+..|.|.+....++.........+.|..++|+.+++.|++++.+|.|.+||++...+++.+....+ .-+.++.
T Consensus 316 ~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~ 395 (514)
T KOG2055|consen 316 NFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCI 395 (514)
T ss_pred CeEEEcccCceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCccceeeeee
Confidence 999999999999999877665555556778899999999999999999999999999999999988875433 2344554
Q ss_pred cC-CCEEEEEeCCCeEEEEEcCC------CcceEEEecCCCcEEEEEEcCCCCEEEEEeC--CCcEEEEECCCCeeEEEe
Q 010754 366 RN-NVSFATSSTDNMIYVCKIGE------NRPIKTFAGHQGEVNCVKWDPTGSLLASCSD--DVTAKIWNMKQDKYVHDL 436 (502)
Q Consensus 366 ~~-~~~~~~~~~d~~i~i~d~~~------~~~~~~~~~h~~~i~~l~~sp~g~~las~s~--dg~i~iwd~~~~~~~~~~ 436 (502)
+. ...|++|+..|.|.|||..+ .+|+.++..-...|+.+.|+|++++||.||. +..+|+-.+.+......+
T Consensus 396 S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNf 475 (514)
T KOG2055|consen 396 SLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNF 475 (514)
T ss_pred cCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccC
Confidence 44 45689999999999999653 4678877777788999999999999998886 678999999887777666
Q ss_pred ccCC---CcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 437 REHS---KEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 437 ~~h~---~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
.... +.|+||+|||.|. .+.+|...+.+.+|-+
T Consensus 476 P~~n~~vg~vtc~aFSP~sG-------~lAvGNe~grv~l~kL 511 (514)
T KOG2055|consen 476 PTSNTKVGHVTCMAFSPNSG-------YLAVGNEAGRVHLFKL 511 (514)
T ss_pred CCCCCcccceEEEEecCCCc-------eEEeecCCCceeeEee
Confidence 5333 4589999999988 7778888888888864
No 130
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.88 E-value=1.2e-19 Score=172.67 Aligned_cols=242 Identities=12% Similarity=0.096 Sum_probs=173.8
Q ss_pred ceEEeccCCCceEEEEEcCCCCeE-EEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLL-ASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l-~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~ 285 (502)
.+..+.+|.. +.+++|+|++..+ ++++.++.|++||+.+++... .+.. ...+..++|+|+
T Consensus 23 ~~~~~~~~~~-~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~-------------~~~~-----~~~~~~~~~~~~ 83 (300)
T TIGR03866 23 VTRTFPVGQR-PRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIG-------------TLPS-----GPDPELFALHPN 83 (300)
T ss_pred eEEEEECCCC-CCceEECCCCCEEEEEECCCCeEEEEECCCCcEEE-------------eccC-----CCCccEEEECCC
Confidence 3455665543 6789999999866 667788999999988765321 1110 123567899999
Q ss_pred CCEEEEE-ECCCeEEEEECCCce-EEEecCccCCeEEEEEecCCCEEEEEecCC-eEEEEEcCCCceEEEEeeccCCeEE
Q 010754 286 GTLLATG-SYDGQARIWSTNGDL-KCTLSKHKGPIFSLKWNKKGDYLLTGSCDK-TAIVWDVKTEEWKQQFEFHSGPTLD 362 (502)
Q Consensus 286 g~~l~s~-~~dg~i~iwd~~~~~-~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~-~i~~wd~~~~~~~~~~~~~~~~v~~ 362 (502)
++.++++ +.++.|++||+.... +..+. +...+.+++|+|++.++++++.++ .+.+||..+++....+.. ......
T Consensus 84 g~~l~~~~~~~~~l~~~d~~~~~~~~~~~-~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~ 161 (300)
T TIGR03866 84 GKILYIANEDDNLVTVIDIETRKVLAEIP-VGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLV-DQRPRF 161 (300)
T ss_pred CCEEEEEcCCCCeEEEEECCCCeEEeEee-CCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEc-CCCccE
Confidence 9977655 568999999987543 33333 334568899999999999888765 567789988877655433 334567
Q ss_pred EEecCCCE-EE-EEeCCCeEEEEEcCCCcceEEEecCCC-------cEEEEEEcCCCCEEEE-EeCCCcEEEEECCCCee
Q 010754 363 VDWRNNVS-FA-TSSTDNMIYVCKIGENRPIKTFAGHQG-------EVNCVKWDPTGSLLAS-CSDDVTAKIWNMKQDKY 432 (502)
Q Consensus 363 v~~~~~~~-~~-~~~~d~~i~i~d~~~~~~~~~~~~h~~-------~i~~l~~sp~g~~las-~s~dg~i~iwd~~~~~~ 432 (502)
+.|++++. ++ ++..++.|++||+.+++.+..+..+.. ....++|+|++++++. .+.++.|.+||+.+++.
T Consensus 162 ~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~ 241 (300)
T TIGR03866 162 AEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEV 241 (300)
T ss_pred EEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcE
Confidence 88877654 43 444689999999999887776653311 2356889999998554 45567899999999888
Q ss_pred EEEeccCCCcEEEEEEccCCCCCCCCCccEEEEe-ecCceEEEEee
Q 010754 433 VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILAR-LIPYFLYWICS 477 (502)
Q Consensus 433 ~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las-~~~~~~iw~~~ 477 (502)
+..+. +...+.+++|+|+|. .++++. .++.+.+|+..
T Consensus 242 ~~~~~-~~~~~~~~~~~~~g~-------~l~~~~~~~~~i~v~d~~ 279 (300)
T TIGR03866 242 LDYLL-VGQRVWQLAFTPDEK-------YLLTTNGVSNDVSVIDVA 279 (300)
T ss_pred EEEEE-eCCCcceEEECCCCC-------EEEEEcCCCCeEEEEECC
Confidence 76654 445799999999998 555543 47889999864
No 131
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.87 E-value=5.6e-22 Score=200.53 Aligned_cols=244 Identities=23% Similarity=0.397 Sum_probs=192.9
Q ss_pred CceEEEEEcCCCCe----EEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC-CEEE
Q 010754 216 SEVCACAWSPAGSL----LASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG-TLLA 290 (502)
Q Consensus 216 ~~V~~~~~~p~~~~----l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g-~~l~ 290 (502)
..-+.++|.+.+.. ||.|..||.|.+||...-.. +.. .........|.+.|..+.|++.+ ++||
T Consensus 65 ~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~-----~~~------~~~la~~~~h~G~V~gLDfN~~q~nlLA 133 (1049)
T KOG0307|consen 65 NRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIA-----NAS------EEVLATKSKHTGPVLGLDFNPFQGNLLA 133 (1049)
T ss_pred ccceeeeecccCCCccceeeccccCCceEEecchhhcc-----Ccc------hHHHhhhcccCCceeeeeccccCCceee
Confidence 34568999997654 99999999999999765210 000 11334456788999999999965 4999
Q ss_pred EEECCCeEEEEECCCceE-EEe--cCccCCeEEEEEecCC-CEEEEEecCCeEEEEEcCCCceEEEEeeccC--CeEEEE
Q 010754 291 TGSYDGQARIWSTNGDLK-CTL--SKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQQFEFHSG--PTLDVD 364 (502)
Q Consensus 291 s~~~dg~i~iwd~~~~~~-~~~--~~~~~~v~~l~~~~~~-~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~--~v~~v~ 364 (502)
+|+.||.|.|||++.... ... ....+.|.+++|+..- ..|++++.+|.+.|||++..+.+..+..+.+ .+..+.
T Consensus 134 SGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~ 213 (1049)
T KOG0307|consen 134 SGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLA 213 (1049)
T ss_pred ccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeee
Confidence 999999999999875221 111 2245679999999744 5777889999999999999888777766554 477899
Q ss_pred ecCCC--EEEEEeCCC---eEEEEEcCCC-cceEEEecCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCeeEEEec
Q 010754 365 WRNNV--SFATSSTDN---MIYVCKIGEN-RPIKTFAGHQGEVNCVKWDPTG-SLLASCSDDVTAKIWNMKQDKYVHDLR 437 (502)
Q Consensus 365 ~~~~~--~~~~~~~d~---~i~i~d~~~~-~~~~~~~~h~~~i~~l~~sp~g-~~las~s~dg~i~iwd~~~~~~~~~~~ 437 (502)
|+|+. .+++++.|. .|.+||+|.. .+++++.+|...|.++.|++.+ .+|+|++.|+.|.+|+.++++.+..+.
T Consensus 214 WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p 293 (1049)
T KOG0307|consen 214 WHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELP 293 (1049)
T ss_pred eCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecC
Confidence 98875 477776655 5899999865 5889999999999999999977 899999999999999999999999999
Q ss_pred cCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 438 EHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 438 ~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
.....+..+.|+|... ..+.+++.++.+.|+..
T Consensus 294 ~~~nW~fdv~w~pr~P------~~~A~asfdgkI~I~sl 326 (1049)
T KOG0307|consen 294 AQGNWCFDVQWCPRNP------SVMAAASFDGKISIYSL 326 (1049)
T ss_pred CCCcceeeeeecCCCc------chhhhheeccceeeeee
Confidence 8888999999999877 24466777787777753
No 132
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.87 E-value=8.9e-22 Score=175.10 Aligned_cols=200 Identities=17% Similarity=0.326 Sum_probs=162.8
Q ss_pred eecCccccCCCCeEEEEECCCC-CEEEEEECCCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEE
Q 010754 265 HVKGRTNEKSKDVTTLDWNGEG-TLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVW 342 (502)
Q Consensus 265 ~~~~~~~~~~~~v~~l~~s~~g-~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~w 342 (502)
.+.+...+|...|.|++=+|.. ..+++|+.||.|+|||+.. .+..++..|.+.|..|++.. ..+++++.|++|+.|
T Consensus 57 PFv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~w 134 (433)
T KOG0268|consen 57 PFVGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQW 134 (433)
T ss_pred cchhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeee
Confidence 3455567788899999999976 7899999999999999875 56778999999999999986 678899999999998
Q ss_pred EcCCC--------------------------------------ceEEEEeeccCCeEEEEecCC--CEEEEEeCCCeEEE
Q 010754 343 DVKTE--------------------------------------EWKQQFEFHSGPTLDVDWRNN--VSFATSSTDNMIYV 382 (502)
Q Consensus 343 d~~~~--------------------------------------~~~~~~~~~~~~v~~v~~~~~--~~~~~~~~d~~i~i 382 (502)
-+... .+++.+......+.++.|.|. ..|++|+.|+.|.+
T Consensus 135 k~~~~p~~tilg~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvL 214 (433)
T KOG0268|consen 135 KIDGPPLHTILGKSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVL 214 (433)
T ss_pred eccCCcceeeeccccccccccccccccccccCceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEE
Confidence 64321 122222223334556666554 34778889999999
Q ss_pred EEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCC-eeEEEeccCCCcEEEEEEccCCCCCCCCCcc
Q 010754 383 CKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD-KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQ 461 (502)
Q Consensus 383 ~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~-~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~ 461 (502)
||++++.|++... -.-.-+.|+|+|.+-.+.+|++|..++.+|++.- .++...++|.+.|.++.|||.|+ .
T Consensus 215 yD~R~~~Pl~KVi-~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~-------E 286 (433)
T KOG0268|consen 215 YDLRQASPLKKVI-LTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQ-------E 286 (433)
T ss_pred EecccCCccceee-eeccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcc-------h
Confidence 9999999988775 3455678999998888999999999999999864 46677889999999999999999 8
Q ss_pred EEEEeecCceEEE
Q 010754 462 LILARLIPYFLYW 474 (502)
Q Consensus 462 l~las~~~~~~iw 474 (502)
+++||.|.+++|+
T Consensus 287 fvsgsyDksIRIf 299 (433)
T KOG0268|consen 287 FVSGSYDKSIRIF 299 (433)
T ss_pred hccccccceEEEe
Confidence 9999999999999
No 133
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.87 E-value=2.9e-21 Score=174.66 Aligned_cols=198 Identities=23% Similarity=0.377 Sum_probs=162.6
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
...+|.||++.|+++.|......+++|+.|.+|++||+.+..+...... ...+..|..+ .
T Consensus 253 ~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~------------------~S~cnDI~~~--~ 312 (459)
T KOG0288|consen 253 LRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLP------------------GSQCNDIVCS--I 312 (459)
T ss_pred hhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheeccccc------------------cccccceEec--c
Confidence 3578999999999999998777799999999999999998665432211 1234444444 5
Q ss_pred CEEEEEECCCeEEEEECCCc-eEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeec----cCCeE
Q 010754 287 TLLATGSYDGQARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH----SGPTL 361 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~----~~~v~ 361 (502)
..+++|-.|+.|++||.++. ....... .+.|+++..++++..+++++.|.++.+.|+++....+.+... ....+
T Consensus 313 ~~~~SgH~DkkvRfwD~Rs~~~~~sv~~-gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwt 391 (459)
T KOG0288|consen 313 SDVISGHFDKKVRFWDIRSADKTRSVPL-GGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWT 391 (459)
T ss_pred eeeeecccccceEEEeccCCceeeEeec-CcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccc
Confidence 57889999999999997754 4444444 459999999999999999999999999999999988887642 23477
Q ss_pred EEEecCCCE-EEEEeCCCeEEEEEcCCCcceEEEecCCCc--EEEEEEcCCCCEEEEEeCCCcEEEE
Q 010754 362 DVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGE--VNCVKWDPTGSLLASCSDDVTAKIW 425 (502)
Q Consensus 362 ~v~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~--i~~l~~sp~g~~las~s~dg~i~iw 425 (502)
.+.|+|++. +++|+.||.|+||++.+++....+...... |++++|+|.|..|++++.++.+.+|
T Consensus 392 rvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 392 RVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred eeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEec
Confidence 888988655 778899999999999999998888765554 9999999999999999999999999
No 134
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.87 E-value=1e-19 Score=168.57 Aligned_cols=231 Identities=19% Similarity=0.310 Sum_probs=183.3
Q ss_pred CCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEEC
Q 010754 215 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY 294 (502)
Q Consensus 215 ~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~ 294 (502)
+.-|.|++|.++|. ++||..+|.|.||+..+.+. ......|.+.|.+++.-.+|.+|- |+.
T Consensus 246 kk~Vl~v~F~engd-viTgDS~G~i~Iw~~~~~~~-----------------~k~~~aH~ggv~~L~~lr~GtllS-GgK 306 (626)
T KOG2106|consen 246 KKFVLCVTFLENGD-VITGDSGGNILIWSKGTNRI-----------------SKQVHAHDGGVFSLCMLRDGTLLS-GGK 306 (626)
T ss_pred ceEEEEEEEcCCCC-EEeecCCceEEEEeCCCceE-----------------EeEeeecCCceEEEEEecCccEee-cCc
Confidence 36799999999987 78999999999999755431 111126788999999999997665 999
Q ss_pred CCeEEEEECCC-------------c----------------------------eEEEecCccCCeEEEEEecCCCEEEEE
Q 010754 295 DGQARIWSTNG-------------D----------------------------LKCTLSKHKGPIFSLKWNKKGDYLLTG 333 (502)
Q Consensus 295 dg~i~iwd~~~-------------~----------------------------~~~~~~~~~~~v~~l~~~~~~~~l~s~ 333 (502)
|..|..||-+- . ......+|....+.++.+|+.+.++++
T Consensus 307 DRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~ 386 (626)
T KOG2106|consen 307 DRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTC 386 (626)
T ss_pred cceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeec
Confidence 99999998310 0 011233577888999999999999999
Q ss_pred ecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEE
Q 010754 334 SCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLL 413 (502)
Q Consensus 334 ~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~l 413 (502)
+.|+.+++|+ ..++..+. ....++.++.|+|.+.++.|...|...+.|..+...+..-.. ..++++++|+|+|.+|
T Consensus 387 gqdk~v~lW~--~~k~~wt~-~~~d~~~~~~fhpsg~va~Gt~~G~w~V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~l 462 (626)
T KOG2106|consen 387 GQDKHVRLWN--DHKLEWTK-IIEDPAECADFHPSGVVAVGTATGRWFVLDTETQDLVTIHTD-NEQLSVVRYSPDGAFL 462 (626)
T ss_pred cCcceEEEcc--CCceeEEE-EecCceeEeeccCcceEEEeeccceEEEEecccceeEEEEec-CCceEEEEEcCCCCEE
Confidence 9999999999 34443332 356688999999999999999999999999999665554444 8899999999999999
Q ss_pred EEEeCCCcEEEEECCCC-eeEEEec-cCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 414 ASCSDDVTAKIWNMKQD-KYVHDLR-EHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 414 as~s~dg~i~iwd~~~~-~~~~~~~-~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
|.|+.|+.|+||.+... ....... .|.++|+.+.||+|++ .++.-|.|..+.+|.
T Consensus 463 Avgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~-------~~~~~S~d~eiLyW~ 519 (626)
T KOG2106|consen 463 AVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQ-------FLVSNSGDYEILYWK 519 (626)
T ss_pred EEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCc-------eEEeccCceEEEEEc
Confidence 99999999999998653 3333332 3448999999999998 777778888889993
No 135
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.87 E-value=1.4e-19 Score=173.51 Aligned_cols=244 Identities=16% Similarity=0.283 Sum_probs=196.7
Q ss_pred eEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC
Q 010754 208 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~ 287 (502)
.+.+.--..+|.++|++.+.+.||.+-.||.|.||++..+=. ....+.+ +....|.+++|++. .
T Consensus 18 crf~d~~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~------------~~~vi~g---~~drsIE~L~W~e~-~ 81 (691)
T KOG2048|consen 18 CRFVDYKPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWF------------LEPVIHG---PEDRSIESLAWAEG-G 81 (691)
T ss_pred EEEEeeeccceEEEEEeccCCceeeeccCCcEEEEccCCCce------------eeEEEec---CCCCceeeEEEccC-C
Confidence 344555568899999999999999999999999999987422 1111222 34567999999954 5
Q ss_pred EEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEE--EEeeccCCeEEEE
Q 010754 288 LLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQ--QFEFHSGPTLDVD 364 (502)
Q Consensus 288 ~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~--~~~~~~~~v~~v~ 364 (502)
.|++.+.+|.|.-||+. .+.........++|++++.+|.+..++.|+.||.+..++...+.... .+....+.+.++.
T Consensus 82 RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLsls 161 (691)
T KOG2048|consen 82 RLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLS 161 (691)
T ss_pred eEEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEE
Confidence 67788889999999975 57777888889999999999999999999999988888887776543 3444668899999
Q ss_pred ecCCCE-EEEEeCCCeEEEEEcCCCcceEEEec--------CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEE
Q 010754 365 WRNNVS-FATSSTDNMIYVCKIGENRPIKTFAG--------HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD 435 (502)
Q Consensus 365 ~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~--------h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~ 435 (502)
|.+... +++|+.||.|++||..++..+..... ...-|.++.|-.+ ..|++|..-|+|.+||...+.++..
T Consensus 162 w~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd-~tI~sgDS~G~V~FWd~~~gTLiqS 240 (691)
T KOG2048|consen 162 WNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRD-STIASGDSAGTVTFWDSIFGTLIQS 240 (691)
T ss_pred ecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeec-CcEEEecCCceEEEEcccCcchhhh
Confidence 988776 99999999999999999887662211 1223677777644 4789999999999999999999999
Q ss_pred eccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 436 LREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 436 ~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
++.|.+.|.+++-.+++. +++.|+.|+.+.-+.
T Consensus 241 ~~~h~adVl~Lav~~~~d-------~vfsaGvd~~ii~~~ 273 (691)
T KOG2048|consen 241 HSCHDADVLALAVADNED-------RVFSAGVDPKIIQYS 273 (691)
T ss_pred hhhhhcceeEEEEcCCCC-------eEEEccCCCceEEEE
Confidence 999999999999999987 788888888765553
No 136
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.87 E-value=3.4e-21 Score=177.87 Aligned_cols=218 Identities=17% Similarity=0.237 Sum_probs=179.7
Q ss_pred ceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCC
Q 010754 217 EVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDG 296 (502)
Q Consensus 217 ~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg 296 (502)
.-+|++......++++|+..+.|+|||+.... +......|...|+++.++....+||+++..|
T Consensus 81 ~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl-----------------~hr~lkdh~stvt~v~YN~~DeyiAsvs~gG 143 (673)
T KOG4378|consen 81 NAFCVACASQSLYEISGGQSGCVKIWDLRAKL-----------------IHRFLKDHQSTVTYVDYNNTDEYIASVSDGG 143 (673)
T ss_pred hHHHHhhhhcceeeeccCcCceeeehhhHHHH-----------------HhhhccCCcceeEEEEecCCcceeEEeccCC
Confidence 34566655566899999999999999998432 2233455678899999999999999999999
Q ss_pred eEEEEECCCceEEEecCcc--CCeEEEEEecCCCE-EEEEecCCeEEEEEcCCCceEEEE-eeccCCeEEEEecCCC--E
Q 010754 297 QARIWSTNGDLKCTLSKHK--GPIFSLKWNKKGDY-LLTGSCDKTAIVWDVKTEEWKQQF-EFHSGPTLDVDWRNNV--S 370 (502)
Q Consensus 297 ~i~iwd~~~~~~~~~~~~~--~~v~~l~~~~~~~~-l~s~~~d~~i~~wd~~~~~~~~~~-~~~~~~v~~v~~~~~~--~ 370 (502)
.|.|..+..+...+...|. ..|.-+.|+|..++ |.+++.+|.|.+||+....++..+ ..|..+...|||+|.+ .
T Consensus 144 diiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l 223 (673)
T KOG4378|consen 144 DIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEAL 223 (673)
T ss_pred cEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccce
Confidence 9999998876665554444 34668999997765 457889999999999887766554 4689999999997754 5
Q ss_pred EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCC-eeEEEeccCCCcEEEEEEc
Q 010754 371 FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD-KYVHDLREHSKEIYTIRWS 449 (502)
Q Consensus 371 ~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~-~~~~~~~~h~~~i~~v~~s 449 (502)
|++.+.|..|++||++.......+. ...+.+.++|+++|.+|+.|+..|.|..||++.. .++..+.+|...|++|+|-
T Consensus 224 ~vsVG~Dkki~~yD~~s~~s~~~l~-y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq 302 (673)
T KOG4378|consen 224 LVSVGYDKKINIYDIRSQASTDRLT-YSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVAFQ 302 (673)
T ss_pred EEEecccceEEEeecccccccceee-ecCCcceeeecCCceEEEeecCCceEEEEecccCCCCceEeeecccceeEEEee
Confidence 8889999999999999887777765 5678999999999999999999999999999864 5788888999999999999
Q ss_pred cCC
Q 010754 450 PTG 452 (502)
Q Consensus 450 p~g 452 (502)
|..
T Consensus 303 ~s~ 305 (673)
T KOG4378|consen 303 PSP 305 (673)
T ss_pred ecc
Confidence 874
No 137
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.87 E-value=2.6e-20 Score=170.77 Aligned_cols=223 Identities=14% Similarity=0.221 Sum_probs=180.2
Q ss_pred CCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC-EEEEEE
Q 010754 215 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT-LLATGS 293 (502)
Q Consensus 215 ~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~-~l~s~~ 293 (502)
.+.|+++.|+|...+|++|+.|++++||.+...... . +.... -...+|.+.+|.|+|. .+++++
T Consensus 213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~-~-----lqS~~---------l~~fPi~~a~f~p~G~~~i~~s~ 277 (514)
T KOG2055|consen 213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNP-K-----LQSIH---------LEKFPIQKAEFAPNGHSVIFTSG 277 (514)
T ss_pred cCCceEEEecCCCceEEEecCCCcEEEEEecCccCh-h-----heeee---------eccCccceeeecCCCceEEEecc
Confidence 478999999999999999999999999998764311 0 11111 1135799999999999 899999
Q ss_pred CCCeEEEEECCCceEEEec---Cc-cCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecC-C
Q 010754 294 YDGQARIWSTNGDLKCTLS---KH-KGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-N 368 (502)
Q Consensus 294 ~dg~i~iwd~~~~~~~~~~---~~-~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~-~ 368 (502)
.....+.||+....+..+. ++ ...+.....+|++++|+..+..|.|.+....+++.+.++. ..+.+.+++|+. +
T Consensus 278 rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~K-ieG~v~~~~fsSds 356 (514)
T KOG2055|consen 278 RRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFK-IEGVVSDFTFSSDS 356 (514)
T ss_pred cceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheee-eccEEeeEEEecCC
Confidence 9999999998765444332 23 2356778889999999999999999999999999998887 456789999955 4
Q ss_pred CEEEEEeCCCeEEEEEcCCCcceEEEecCCC-cEEEEEEcCCCCEEEEEeCCCcEEEEECCC------CeeEEEeccCCC
Q 010754 369 VSFATSSTDNMIYVCKIGENRPIKTFAGHQG-EVNCVKWDPTGSLLASCSDDVTAKIWNMKQ------DKYVHDLREHSK 441 (502)
Q Consensus 369 ~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~-~i~~l~~sp~g~~las~s~dg~i~iwd~~~------~~~~~~~~~h~~ 441 (502)
..+++++.+|.|++||++...++.+|.-..+ .-++++.+++|.|||+||..|.|.|||.++ .+++..+..-..
T Consensus 357 k~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt 436 (514)
T KOG2055|consen 357 KELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTT 436 (514)
T ss_pred cEEEEEcCCceEEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhhe
Confidence 5588888999999999999999988863322 245678889999999999999999999653 466777776777
Q ss_pred cEEEEEEccCCC
Q 010754 442 EIYTIRWSPTGS 453 (502)
Q Consensus 442 ~i~~v~~sp~g~ 453 (502)
.|+++.|+||++
T Consensus 437 ~Itsl~Fn~d~q 448 (514)
T KOG2055|consen 437 AITSLQFNHDAQ 448 (514)
T ss_pred eeeeeeeCcchh
Confidence 899999999998
No 138
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.87 E-value=2e-20 Score=179.51 Aligned_cols=250 Identities=21% Similarity=0.357 Sum_probs=199.5
Q ss_pred EEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCE
Q 010754 209 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 288 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~ 288 (502)
..+.||.+-|+++.|+|.+..|+++|.|.++.+|.-.+..- +-......+...+........-|+|+++.
T Consensus 261 all~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tG----------iWv~~vRlGe~gg~a~GF~g~lw~~n~~~ 330 (764)
T KOG1063|consen 261 ALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTG----------IWVDVVRLGEVGGSAGGFWGGLWSPNSNV 330 (764)
T ss_pred hhhcCcccceEEEEEccchhhheecccCcceEEEecCCccc----------eEEEEEEeecccccccceeeEEEcCCCCE
Confidence 45679999999999999999999999999999998665321 11111122233344556889999999999
Q ss_pred EEEEECCCeEEEEECCC----ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC----ceEEEEeeccCCe
Q 010754 289 LATGSYDGQARIWSTNG----DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE----EWKQQFEFHSGPT 360 (502)
Q Consensus 289 l~s~~~dg~i~iwd~~~----~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~----~~~~~~~~~~~~v 360 (502)
+++-++.|..++|.... .......+|...|..+.|+|.|.+|++.+.|-+-++|---.. ..+..-+.|.-.+
T Consensus 331 ii~~g~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl 410 (764)
T KOG1063|consen 331 IIAHGRTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDL 410 (764)
T ss_pred EEEecccCcEEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccc
Confidence 99999999999998433 233456789999999999999999999999999999864311 1222334577778
Q ss_pred EEEEecC-CCEEEEEeCCCeEEEEEcCCC--------------------------------cc-----------------
Q 010754 361 LDVDWRN-NVSFATSSTDNMIYVCKIGEN--------------------------------RP----------------- 390 (502)
Q Consensus 361 ~~v~~~~-~~~~~~~~~d~~i~i~d~~~~--------------------------------~~----------------- 390 (502)
.++.+.+ +..|++|.....+|+|+.... ++
T Consensus 411 ~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~e 490 (764)
T KOG1063|consen 411 TCLSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAE 490 (764)
T ss_pred eeeehccCCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeee
Confidence 9999977 777999999999999986421 00
Q ss_pred ---------------------------eEEEecCCCcEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCeeEEEecc
Q 010754 391 ---------------------------IKTFAGHQGEVNCVKWDPTGSLLASCSDD-----VTAKIWNMKQDKYVHDLRE 438 (502)
Q Consensus 391 ---------------------------~~~~~~h~~~i~~l~~sp~g~~las~s~d-----g~i~iwd~~~~~~~~~~~~ 438 (502)
++++.||...|.+++.+|+|+++||++.. ..|++|+..+...+..+.+
T Consensus 491 t~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~ 570 (764)
T KOG1063|consen 491 TPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEG 570 (764)
T ss_pred cccccCchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecc
Confidence 02334899999999999999999999864 3599999999999999999
Q ss_pred CCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 439 HSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 439 h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
|+-.|+.++|||||. +|+.+|.|.++.+|.
T Consensus 571 HsLTVT~l~FSpdg~-------~LLsvsRDRt~sl~~ 600 (764)
T KOG1063|consen 571 HSLTVTRLAFSPDGR-------YLLSVSRDRTVSLYE 600 (764)
T ss_pred cceEEEEEEECCCCc-------EEEEeecCceEEeee
Confidence 999999999999999 888999999998884
No 139
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.86 E-value=3.6e-20 Score=160.20 Aligned_cols=253 Identities=23% Similarity=0.382 Sum_probs=188.2
Q ss_pred EEeccCCCceEEEEEcC-CCCeEEEEeCC-------CcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEE
Q 010754 209 TILEGHTSEVCACAWSP-AGSLLASGSGD-------STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTL 280 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p-~~~~l~sgs~d-------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l 280 (502)
.+|..|.+.|..++-+| +..+|+|+..+ ..+.||.++...... +...+.........+-+.|.|+
T Consensus 57 kvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S-------~~~tlE~v~~Ldteavg~i~cv 129 (370)
T KOG1007|consen 57 KVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQS-------NSSTLECVASLDTEAVGKINCV 129 (370)
T ss_pred hhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCcc-------ccchhhHhhcCCHHHhCceeeE
Confidence 45677889999999999 56677777553 247899998653211 0111111111222334579999
Q ss_pred EECCCCCEEEEEECCCeEEEEECCCceE--EEe-----cCccCCeEEEEEec--CCCEEEEEecCCeEEEEEcCCCceEE
Q 010754 281 DWNGEGTLLATGSYDGQARIWSTNGDLK--CTL-----SKHKGPIFSLKWNK--KGDYLLTGSCDKTAIVWDVKTEEWKQ 351 (502)
Q Consensus 281 ~~s~~g~~l~s~~~dg~i~iwd~~~~~~--~~~-----~~~~~~v~~l~~~~--~~~~l~s~~~d~~i~~wd~~~~~~~~ 351 (502)
.|.|++..+++-. |..|.+|++..... ..+ ..+....++-+|+| +++.+++. .|+++..||+++.+...
T Consensus 130 ew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~~~ 207 (370)
T KOG1007|consen 130 EWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKKNN 207 (370)
T ss_pred EEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEe-CCCcEEEEEccchhhhc
Confidence 9999999988766 89999999864322 211 23566788899999 66776664 68999999999987766
Q ss_pred EEe-eccCCeEEEEecCCCE--EEEEeCCCeEEEEEcCCC-cceEEEecCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEE
Q 010754 352 QFE-FHSGPTLDVDWRNNVS--FATSSTDNMIYVCKIGEN-RPIKTFAGHQGEVNCVKWDPT-GSLLASCSDDVTAKIWN 426 (502)
Q Consensus 352 ~~~-~~~~~v~~v~~~~~~~--~~~~~~d~~i~i~d~~~~-~~~~~~~~h~~~i~~l~~sp~-g~~las~s~dg~i~iwd 426 (502)
.+. .|...+.+++|.|+.. +++|+.||.|++||.+.. .++..+.+|...|.++.|+|. .++|++|+.|..|.+|.
T Consensus 208 sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsc 287 (370)
T KOG1007|consen 208 SIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSC 287 (370)
T ss_pred chhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEe
Confidence 654 4777899999988764 899999999999999865 589999999999999999995 56888999999999997
Q ss_pred CCCC-----------------------------eeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 427 MKQD-----------------------------KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 427 ~~~~-----------------------------~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
..+- ..+.++..|...|++++||...+ .+.||.+-+.++-+-+
T Consensus 288 a~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadP--------WiFASLSYDGRviIs~ 359 (370)
T KOG1007|consen 288 ASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADP--------WIFASLSYDGRVIISS 359 (370)
T ss_pred ccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCC--------eeEEEeccCceEEeec
Confidence 5321 12456778999999999999876 5777777666665544
Q ss_pred e
Q 010754 478 I 478 (502)
Q Consensus 478 ~ 478 (502)
+
T Consensus 360 V 360 (370)
T KOG1007|consen 360 V 360 (370)
T ss_pred C
Confidence 3
No 140
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.86 E-value=1.4e-19 Score=177.06 Aligned_cols=248 Identities=24% Similarity=0.300 Sum_probs=192.2
Q ss_pred CCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC
Q 010754 205 NSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 284 (502)
Q Consensus 205 ~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~ 284 (502)
.+.+.+++++...|+++.-+|-=..+|.|..+|+|.|+++..++.+. . +.. ..+.|+.++|..
T Consensus 192 ~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~----------s---Fk~----d~g~VtslSFrt 254 (910)
T KOG1539|consen 192 GKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILM----------S---FKQ----DWGRVTSLSFRT 254 (910)
T ss_pred CcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEE----------E---EEc----cccceeEEEecc
Confidence 45578999999999999999988899999999999999999877432 1 111 136799999999
Q ss_pred CCC-EEEEEECCCeEEEEECCCceEE--EecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCc----eEEEEeecc
Q 010754 285 EGT-LLATGSYDGQARIWSTNGDLKC--TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE----WKQQFEFHS 357 (502)
Q Consensus 285 ~g~-~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~----~~~~~~~~~ 357 (502)
||+ .+++|+..|.+.+||++.+... ....|.+.|..+.|.|....+++++.|+.+++|=..++. .++.-.+|.
T Consensus 255 DG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs 334 (910)
T KOG1539|consen 255 DGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHS 334 (910)
T ss_pred CCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCC
Confidence 997 5666777799999999875443 445788999999999999999999999998888443221 111111111
Q ss_pred CC------------------------------------------------------------------------------
Q 010754 358 GP------------------------------------------------------------------------------ 359 (502)
Q Consensus 358 ~~------------------------------------------------------------------------------ 359 (502)
.|
T Consensus 335 ~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv 414 (910)
T KOG1539|consen 335 APPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNV 414 (910)
T ss_pred CCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcce
Confidence 11
Q ss_pred ------------------------------------eEEEEecC-CCEEEEEeCCCeEEEEEcCCCcceEEE---ecCCC
Q 010754 360 ------------------------------------TLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTF---AGHQG 399 (502)
Q Consensus 360 ------------------------------------v~~v~~~~-~~~~~~~~~d~~i~i~d~~~~~~~~~~---~~h~~ 399 (502)
+++++.+. ++..+.|...|.|-+|++.+|....+| ..|.+
T Consensus 415 ~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~ 494 (910)
T KOG1539|consen 415 ITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKG 494 (910)
T ss_pred eEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccC
Confidence 12222222 122345667888899999988888888 57999
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCe-----------------------------------------eEEEecc
Q 010754 400 EVNCVKWDPTGSLLASCSDDVTAKIWNMKQDK-----------------------------------------YVHDLRE 438 (502)
Q Consensus 400 ~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~-----------------------------------------~~~~~~~ 438 (502)
+|++++.+.-++.+++++.+|.+++||.++.. .++.+.+
T Consensus 495 ~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~g 574 (910)
T KOG1539|consen 495 EVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWG 574 (910)
T ss_pred ceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhc
Confidence 99999999999999999999999999986543 2345678
Q ss_pred CCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 439 HSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 439 h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
|+..|++++|||||. ++++|+.|+++++|+.
T Consensus 575 h~nritd~~FS~Dgr-------WlisasmD~tIr~wDl 605 (910)
T KOG1539|consen 575 HGNRITDMTFSPDGR-------WLISASMDSTIRTWDL 605 (910)
T ss_pred cccceeeeEeCCCCc-------EEEEeecCCcEEEEec
Confidence 999999999999999 9999999999999963
No 141
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.86 E-value=3.6e-19 Score=170.66 Aligned_cols=241 Identities=19% Similarity=0.254 Sum_probs=190.7
Q ss_pred ccCCCCceeeeCCC-----ceEEeccCC-CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeee
Q 010754 193 ATTSASESFEIPNS-----DVTILEGHT-SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHV 266 (502)
Q Consensus 193 ~~~~~~~~~~~~~~-----~~~~l~~H~-~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 266 (502)
+....++.+++++- ...++.||. ..|-+++|+ ++..|++.+.+|.|.-||+.+.+...
T Consensus 41 AvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~-e~~RLFS~g~sg~i~EwDl~~lk~~~--------------- 104 (691)
T KOG2048|consen 41 AVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWA-EGGRLFSSGLSGSITEWDLHTLKQKY--------------- 104 (691)
T ss_pred eeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEc-cCCeEEeecCCceEEEEecccCceeE---------------
Confidence 33334445555432 245666664 689999999 45568888899999999999876422
Q ss_pred cCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCCceE---EEecCccCCeEEEEEecCCCEEEEEecCCeEEEEE
Q 010754 267 KGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLK---CTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWD 343 (502)
Q Consensus 267 ~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~---~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd 343 (502)
......+.|++++.+|.+..++.|+.||.+..++...+.+ ..+...++.|.+++|+|++..+++|+.||.|++||
T Consensus 105 --~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd 182 (691)
T KOG2048|consen 105 --NIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWD 182 (691)
T ss_pred --EecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEE
Confidence 1122356799999999999999999999777777665433 34556679999999999999999999999999999
Q ss_pred cCCCceEEEEee--------ccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEE
Q 010754 344 VKTEEWKQQFEF--------HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLAS 415 (502)
Q Consensus 344 ~~~~~~~~~~~~--------~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las 415 (502)
+.++..+..... ...-|.++.+..++.+++|..-|+|.+||...+..++.+..|.+.|.+++..+++.++++
T Consensus 183 ~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~~d~vfs 262 (691)
T KOG2048|consen 183 VKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDSTIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALAVADNEDRVFS 262 (691)
T ss_pred cCCCceEEEeeecccccccCCceEEEEEEEeecCcEEEecCCceEEEEcccCcchhhhhhhhhcceeEEEEcCCCCeEEE
Confidence 999887663221 122367788888899999999999999999999999999999999999999999999999
Q ss_pred EeCCCcEEEEECCCCee--E--EEeccCCCcEEEEEEccC
Q 010754 416 CSDDVTAKIWNMKQDKY--V--HDLREHSKEIYTIRWSPT 451 (502)
Q Consensus 416 ~s~dg~i~iwd~~~~~~--~--~~~~~h~~~i~~v~~sp~ 451 (502)
++.|+.|.-+...+.+. + .....|...|.+++..++
T Consensus 263 aGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~ 302 (691)
T KOG2048|consen 263 AGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN 302 (691)
T ss_pred ccCCCceEEEEecCCccceeeeccccCCcccceeeeeecc
Confidence 99999999888766533 2 222368888999998887
No 142
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.86 E-value=2.6e-20 Score=167.58 Aligned_cols=234 Identities=19% Similarity=0.325 Sum_probs=176.9
Q ss_pred EEeccCCCceEEEEEcC-CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC-C
Q 010754 209 TILEGHTSEVCACAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE-G 286 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p-~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~-g 286 (502)
-.+.||+++|..++|+| +...||+||.|.+|.||.+..+...... ........+|...|..++|+|. .
T Consensus 75 P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~l----------tepvv~L~gH~rrVg~V~wHPtA~ 144 (472)
T KOG0303|consen 75 PLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDL----------TEPVVELYGHQRRVGLVQWHPTAP 144 (472)
T ss_pred CCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCc----------ccceEEEeecceeEEEEeecccch
Confidence 45689999999999999 6789999999999999999987543322 1233445677889999999995 5
Q ss_pred CEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCC-eEEEEe
Q 010754 287 TLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP-TLDVDW 365 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~-v~~v~~ 365 (502)
+.|++++.|..|.+|++.+........|...|+++.|+.+|.+|++.+.|+.|+|||.++++.+..-..|.+. -..+.|
T Consensus 145 NVLlsag~Dn~v~iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raif 224 (472)
T KOG0303|consen 145 NVLLSAGSDNTVSIWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIF 224 (472)
T ss_pred hhHhhccCCceEEEEeccCCceeeecCCCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEE
Confidence 6899999999999999886554444449999999999999999999999999999999999999887777663 455666
Q ss_pred cCCCEEEEEe----CCCeEEEEEcCCCc-c--eEEEecCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEECCCCee-EEEe
Q 010754 366 RNNVSFATSS----TDNMIYVCKIGENR-P--IKTFAGHQGEVNCVKWDPTGSLLASCS-DDVTAKIWNMKQDKY-VHDL 436 (502)
Q Consensus 366 ~~~~~~~~~~----~d~~i~i~d~~~~~-~--~~~~~~h~~~i~~l~~sp~g~~las~s-~dg~i~iwd~~~~~~-~~~~ 436 (502)
..++.+++.+ .+..+-+||..+-. + ...+. ..+.|.---|+|+.+++..++ .|+.||.|.+....+ ++-+
T Consensus 225 l~~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elD-tSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~P~~hyl 303 (472)
T KOG0303|consen 225 LASGKIFTTGFSRMSERQIALWDPNNLEEPIALQELD-TSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEPPFVHYL 303 (472)
T ss_pred eccCceeeeccccccccceeccCcccccCcceeEEec-cCCceEEeeecCCCCEEEEEecCCcceEEEEecCCCceeEEe
Confidence 5555566554 46789999976543 2 33444 234566667889988877665 599999999877653 2333
Q ss_pred cc--CCCcEEEEEEccCCC
Q 010754 437 RE--HSKEIYTIRWSPTGS 453 (502)
Q Consensus 437 ~~--h~~~i~~v~~sp~g~ 453 (502)
.. ...+=..+.|-|...
T Consensus 304 n~f~S~epQRG~g~mPKRG 322 (472)
T KOG0303|consen 304 NTFSSKEPQRGMGFMPKRG 322 (472)
T ss_pred cccccCCcccccccccccc
Confidence 21 233456677777543
No 143
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.86 E-value=9.8e-21 Score=179.58 Aligned_cols=129 Identities=25% Similarity=0.371 Sum_probs=103.2
Q ss_pred ceEEeccCCCceEEEEEcC-CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC
Q 010754 207 DVTILEGHTSEVCACAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p-~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~ 285 (502)
.+..|.+|.+.|+.+.|+| ...+|||||.|..|+||.+..+.... +. .......+..-.|-++.|+|.
T Consensus 71 ~i~~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q~-LS----------ape~~~g~~~~~vE~l~fHpT 139 (1012)
T KOG1445|consen 71 DIGILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQK-LS----------APEIDVGGGNVIVECLRFHPT 139 (1012)
T ss_pred ccceeecccceeeccCccccchhhhhcccCCCeeEEEecCCCcccc-cC----------CcceeecCCceEEEEeecccC
Confidence 5678899999999999999 57799999999999999998543211 10 011112233456899999997
Q ss_pred CCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCC
Q 010754 286 GTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT 346 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~ 346 (502)
..-|+..+..|.++|||+. ++....+.+|...|.++.|+.+|..|++++.|+.|+|||-+.
T Consensus 140 aDgil~s~a~g~v~i~D~stqk~~~el~~h~d~vQSa~WseDG~llatscKdkqirifDPRa 201 (1012)
T KOG1445|consen 140 ADGILASGAHGSVYITDISTQKTAVELSGHTDKVQSADWSEDGKLLATSCKDKQIRIFDPRA 201 (1012)
T ss_pred cCceEEeccCceEEEEEcccCceeecccCCchhhhccccccCCceEeeecCCcceEEeCCcc
Confidence 6666666667999999976 567788999999999999999999999999999999998753
No 144
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.86 E-value=1.1e-19 Score=164.35 Aligned_cols=156 Identities=24% Similarity=0.498 Sum_probs=124.6
Q ss_pred CCceEEEEEcCCCC-eEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE
Q 010754 215 TSEVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 293 (502)
Q Consensus 215 ~~~V~~~~~~p~~~-~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~ 293 (502)
..+|..+.|.+++. .||||+.|..|+||.+..+...... .. -........|...|+++.|+|+|.+||+|+
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~----~~----V~y~s~Ls~H~~aVN~vRf~p~gelLASg~ 84 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGD----MK----VEYLSSLSRHTRAVNVVRFSPDGELLASGG 84 (434)
T ss_pred CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCc----ee----EEEeecccCCcceeEEEEEcCCcCeeeecC
Confidence 46899999999765 9999999999999999876532211 11 123345567889999999999999999999
Q ss_pred CCCeEEEEECC--------C---------ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeec
Q 010754 294 YDGQARIWSTN--------G---------DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH 356 (502)
Q Consensus 294 ~dg~i~iwd~~--------~---------~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~ 356 (502)
.+|.|.+|-.. + .....+.+|...|+.++|+|+++++++++.|+.+++||+..|.....+..|
T Consensus 85 D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh 164 (434)
T KOG1009|consen 85 DGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDH 164 (434)
T ss_pred CCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeecccc
Confidence 99999999744 2 134466789999999999999999999999999999999999999999888
Q ss_pred cCCeEEEEecCCCE-EEEEeCCC
Q 010754 357 SGPTLDVDWRNNVS-FATSSTDN 378 (502)
Q Consensus 357 ~~~v~~v~~~~~~~-~~~~~~d~ 378 (502)
..-+..++|.|-+. +++-+.|.
T Consensus 165 ~~yvqgvawDpl~qyv~s~s~dr 187 (434)
T KOG1009|consen 165 EHYVQGVAWDPLNQYVASKSSDR 187 (434)
T ss_pred ccccceeecchhhhhhhhhccCc
Confidence 88888888865433 33334444
No 145
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.86 E-value=6.8e-20 Score=160.57 Aligned_cols=204 Identities=14% Similarity=0.192 Sum_probs=156.6
Q ss_pred ccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCCce------EEEecCccCCeEEEEEecCCCEEEE-EecCCeEEEEE
Q 010754 271 NEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDL------KCTLSKHKGPIFSLKWNKKGDYLLT-GSCDKTAIVWD 343 (502)
Q Consensus 271 ~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~------~~~~~~~~~~v~~l~~~~~~~~l~s-~~~d~~i~~wd 343 (502)
.+|...|++++|+.||++|++++.|+.|+||+++.-. +..-.. -+-.+.+.|.||-+-++. +-...++++|-
T Consensus 83 KgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve-~dhpT~V~FapDc~s~vv~~~~g~~l~vyk 161 (420)
T KOG2096|consen 83 KGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVE-YDHPTRVVFAPDCKSVVVSVKRGNKLCVYK 161 (420)
T ss_pred hccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhcccc-CCCceEEEECCCcceEEEEEccCCEEEEEE
Confidence 4678899999999999999999999999999976421 111111 124578999998876554 44566899997
Q ss_pred cCC---CceEEE---------EeeccCCeEEEEecCCC-EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCC
Q 010754 344 VKT---EEWKQQ---------FEFHSGPTLDVDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG 410 (502)
Q Consensus 344 ~~~---~~~~~~---------~~~~~~~v~~v~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g 410 (502)
+.. |..... -..|...+.++-...+. .+++++.|..|.+|+++ |+.+..+......-+..+.||+|
T Consensus 162 ~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~G 240 (420)
T KOG2096|consen 162 LVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDG 240 (420)
T ss_pred eeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeCCCC
Confidence 642 221111 11244455555554444 47889999999999998 88888888777777788999999
Q ss_pred CEEEEEeCCCcEEEEECC---CC-----eeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEeeeEEEe
Q 010754 411 SLLASCSDDVTAKIWNMK---QD-----KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICSIYFKY 482 (502)
Q Consensus 411 ~~las~s~dg~i~iwd~~---~~-----~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~~~~~ 482 (502)
++||+++-.-.|++|.+- .| +.+..+++|.+.|..++|||+.. +.+++|-||.+++|+.++.|..
T Consensus 241 RFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~-------r~vtvSkDG~wriwdtdVrY~~ 313 (420)
T KOG2096|consen 241 RFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSST-------RAVTVSKDGKWRIWDTDVRYEA 313 (420)
T ss_pred cEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcc-------eeEEEecCCcEEEeeccceEec
Confidence 999999998899999862 22 24567889999999999999998 8899999999999999998865
Q ss_pred e
Q 010754 483 F 483 (502)
Q Consensus 483 ~ 483 (502)
.
T Consensus 314 ~ 314 (420)
T KOG2096|consen 314 G 314 (420)
T ss_pred C
Confidence 4
No 146
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.85 E-value=8.5e-20 Score=167.30 Aligned_cols=246 Identities=17% Similarity=0.289 Sum_probs=184.2
Q ss_pred eEEeccCCCceEEEEEcCCC--CeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC-
Q 010754 208 VTILEGHTSEVCACAWSPAG--SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG- 284 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~--~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~- 284 (502)
..+.+-|.+.|++++|+|.. +++|+|..-|.|-+||+.+..... .-......|+.+|.+|.|+|
T Consensus 179 ~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~-------------d~v~~f~~hs~~Vs~l~F~P~ 245 (498)
T KOG4328|consen 179 LNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDK-------------DGVYLFTPHSGPVSGLKFSPA 245 (498)
T ss_pred cceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCcc-------------CceEEeccCCccccceEecCC
Confidence 35567789999999999953 689999999999999996322100 01122346788999999999
Q ss_pred CCCEEEEEECCCeEEEEECCCce---EEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCce-EEEEeeccCCe
Q 010754 285 EGTLLATGSYDGQARIWSTNGDL---KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEW-KQQFEFHSGPT 360 (502)
Q Consensus 285 ~g~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~-~~~~~~~~~~v 360 (502)
+-..+++.++||+|++-|+++.. +..+......+.++.|+.+...++.+..=|...+||++++.. ...+..|...|
T Consensus 246 n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI 325 (498)
T KOG4328|consen 246 NTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKI 325 (498)
T ss_pred ChhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhccc
Confidence 45689999999999999988643 333333456678888888888888888878999999998765 55566788899
Q ss_pred EEEEecCC--CEEEEEeCCCeEEEEEcCCCc----ceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECC----CC
Q 010754 361 LDVDWRNN--VSFATSSTDNMIYVCKIGENR----PIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK----QD 430 (502)
Q Consensus 361 ~~v~~~~~--~~~~~~~~d~~i~i~d~~~~~----~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~----~~ 430 (502)
..|++.|- ..+++++.|++++|||++.-. |+-....|...|.+..|||.+-.|++.+.|..|+|||.. ..
T Consensus 326 ~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~ 405 (498)
T KOG4328|consen 326 TSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKD 405 (498)
T ss_pred ceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccC
Confidence 99999774 459999999999999998643 233344599999999999998889999999999999983 33
Q ss_pred eeEEEeccCCC------cEEEEEEccCCCCCCCCCccEEEEeecCceEEE
Q 010754 431 KYVHDLREHSK------EIYTIRWSPTGSGTNNPNQQLILARLIPYFLYW 474 (502)
Q Consensus 431 ~~~~~~~~h~~------~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw 474 (502)
.+...+. |.. ......|.|+.. .++++-....|-|+
T Consensus 406 ~p~~~I~-Hn~~t~RwlT~fKA~W~P~~~-------li~vg~~~r~IDv~ 447 (498)
T KOG4328|consen 406 EPLGTIP-HNNRTGRWLTPFKAAWDPDYN-------LIVVGRYPRPIDVF 447 (498)
T ss_pred Cccceee-ccCcccccccchhheeCCCcc-------EEEEeccCcceeEE
Confidence 3444443 321 245678999877 44444444444444
No 147
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.84 E-value=4.4e-20 Score=177.45 Aligned_cols=199 Identities=21% Similarity=0.304 Sum_probs=165.1
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC---CCCEEE
Q 010754 214 HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG---EGTLLA 290 (502)
Q Consensus 214 H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~---~g~~l~ 290 (502)
-.-.|.+++.+|+|++||+|..-|+++||++.+-... .....|...|.|+.|+. ..++||
T Consensus 458 ~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~-----------------~~~eAHesEilcLeyS~p~~~~kLLA 520 (1080)
T KOG1408|consen 458 SRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYT-----------------CFMEAHESEILCLEYSFPVLTNKLLA 520 (1080)
T ss_pred cccceEEEEECCCcceecccCccCceEEEEehhhhhh-----------------hheecccceeEEEeecCchhhhHhhh
Confidence 3457999999999999999999999999999875432 23345678899999985 357899
Q ss_pred EEECCCeEEEEECCC--ceEEEecCccCC-------------------------------------------------eE
Q 010754 291 TGSYDGQARIWSTNG--DLKCTLSKHKGP-------------------------------------------------IF 319 (502)
Q Consensus 291 s~~~dg~i~iwd~~~--~~~~~~~~~~~~-------------------------------------------------v~ 319 (502)
+++.|..|+|||+.. .++.++.+|... ++
T Consensus 521 SasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlY 600 (1080)
T KOG1408|consen 521 SASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLY 600 (1080)
T ss_pred hccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEE
Confidence 999999999999642 233333333333 45
Q ss_pred EEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEee---ccCCeEEEEecCCC-EEEEEeCCCeEEEEEcCCCcceEEEe
Q 010754 320 SLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF---HSGPTLDVDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFA 395 (502)
Q Consensus 320 ~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~---~~~~v~~v~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~ 395 (502)
.|+..|..+++++++.|+.|+|||+.+++..+.|++ |.+....+...|.+ .+++.+.|.++.++|.-+++++.++.
T Consensus 601 Dm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~ 680 (1080)
T KOG1408|consen 601 DMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMT 680 (1080)
T ss_pred EeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhc
Confidence 566666677899999999999999999999999986 45667777776654 57888999999999999999999999
Q ss_pred cCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 010754 396 GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ 429 (502)
Q Consensus 396 ~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~ 429 (502)
||...|+.+.|.+|-+.|++.+.||.|.||.+..
T Consensus 681 GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~lp~ 714 (1080)
T KOG1408|consen 681 GHSEAVTGVKFLNDCKHLISVSGDGCIFVWKLPL 714 (1080)
T ss_pred CcchheeeeeecccchhheeecCCceEEEEECch
Confidence 9999999999999999999999999999999853
No 148
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.84 E-value=2.9e-20 Score=174.65 Aligned_cols=254 Identities=20% Similarity=0.280 Sum_probs=192.5
Q ss_pred EEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCE
Q 010754 209 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 288 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~ 288 (502)
.++..|.+.|+.++|+|....|++++.||++++|++++... .....+.. ...+.+|.++|.|+++.+++..
T Consensus 288 ~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~-----s~~~~~ep----i~tfraH~gPVl~v~v~~n~~~ 358 (577)
T KOG0642|consen 288 FTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKK-----SAEKDVEP----ILTFRAHEGPVLCVVVPSNGEH 358 (577)
T ss_pred eeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCC-----ccccceee----eEEEecccCceEEEEecCCceE
Confidence 48889999999999999999999999999999999955221 11111111 2334567899999999999999
Q ss_pred EEEEECCCeEEEEECC-----------CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEee--
Q 010754 289 LATGSYDGQARIWSTN-----------GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF-- 355 (502)
Q Consensus 289 l~s~~~dg~i~iwd~~-----------~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~-- 355 (502)
+++|+.||+|+.|++. ......+.+|.+.|+.+++++....|++|+.||++++|+...... .+|..
T Consensus 359 ~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~ 437 (577)
T KOG0642|consen 359 CYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPK 437 (577)
T ss_pred EEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccCCcc
Confidence 9999999999999542 123456789999999999999999999999999999999866555 33322
Q ss_pred ccCCeEEEEecCCC--EEEEEeCCCeEEEEEcCCCcceEEEecC-------CCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 010754 356 HSGPTLDVDWRNNV--SFATSSTDNMIYVCKIGENRPIKTFAGH-------QGEVNCVKWDPTGSLLASCSDDVTAKIWN 426 (502)
Q Consensus 356 ~~~~v~~v~~~~~~--~~~~~~~d~~i~i~d~~~~~~~~~~~~h-------~~~i~~l~~sp~g~~las~s~dg~i~iwd 426 (502)
..+..+.+++.... ..++...-+.-.++++.....+..+... ...++.+.++|.+.+.+++..|+.|+++|
T Consensus 438 e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~d 517 (577)
T KOG0642|consen 438 EHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFD 517 (577)
T ss_pred ccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceeccc
Confidence 22234455553322 1222222233334444444444444321 13578899999999999999999999999
Q ss_pred CCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEeeeE
Q 010754 427 MKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICSIY 479 (502)
Q Consensus 427 ~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~~ 479 (502)
..++++++...+|...++++++-|+|. .++.++.++.+++|.....
T Consensus 518 n~~~~~l~s~~a~~~svtslai~~ng~-------~l~s~s~d~sv~l~kld~k 563 (577)
T KOG0642|consen 518 NKTGKILHSMVAHKDSVTSLAIDPNGP-------YLMSGSHDGSVRLWKLDVK 563 (577)
T ss_pred ccccccchheeeccceecceeecCCCc-------eEEeecCCceeehhhccch
Confidence 999999999999999999999999998 8889999999999976443
No 149
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.84 E-value=2.9e-18 Score=163.03 Aligned_cols=221 Identities=12% Similarity=0.109 Sum_probs=161.1
Q ss_pred EEeccCCCceEEEEEcCCCCeEEEE-eCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC
Q 010754 209 TILEGHTSEVCACAWSPAGSLLASG-SGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~~~~l~sg-s~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~ 287 (502)
..+..|.. +..++|+|+++.++++ +.|+.+++||+.+.+... .+. ....+.+++|+|+|.
T Consensus 67 ~~~~~~~~-~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~-------------~~~-----~~~~~~~~~~~~dg~ 127 (300)
T TIGR03866 67 GTLPSGPD-PELFALHPNGKILYIANEDDNLVTVIDIETRKVLA-------------EIP-----VGVEPEGMAVSPDGK 127 (300)
T ss_pred EeccCCCC-ccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEe-------------Eee-----CCCCcceEEECCCCC
Confidence 33444433 5678999999876554 568999999998754211 111 112367899999999
Q ss_pred EEEEEECCC-eEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEE-ecCCeEEEEEcCCCceEEEEeeccC-------
Q 010754 288 LLATGSYDG-QARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTG-SCDKTAIVWDVKTEEWKQQFEFHSG------- 358 (502)
Q Consensus 288 ~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~-~~d~~i~~wd~~~~~~~~~~~~~~~------- 358 (502)
++++++.++ .+.+||...............+.++.|+|++++|+++ ..++.|++||+.+++.+..+..+..
T Consensus 128 ~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~ 207 (300)
T TIGR03866 128 IVVNTSETTNMAHFIDTKTYEIVDNVLVDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAV 207 (300)
T ss_pred EEEEEecCCCeEEEEeCCCCeEEEEEEcCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccC
Confidence 999998775 5677897754333222233456789999999988654 4699999999999987776653321
Q ss_pred CeEEEEecCCCE--EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEE-eCCCcEEEEECCCCeeEEE
Q 010754 359 PTLDVDWRNNVS--FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASC-SDDVTAKIWNMKQDKYVHD 435 (502)
Q Consensus 359 ~v~~v~~~~~~~--~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~-s~dg~i~iwd~~~~~~~~~ 435 (502)
....+.|++++. +++.+.++.+.+||+.+++.+..+. +...+.+++|+|+|++|+++ +.+|.|++||+.+++++..
T Consensus 208 ~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~ 286 (300)
T TIGR03866 208 QPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLL-VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKS 286 (300)
T ss_pred CccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEE-eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEE
Confidence 234677887665 3445567789999999888776554 45579999999999999886 4689999999999999999
Q ss_pred eccCCCcEEEEEEcc
Q 010754 436 LREHSKEIYTIRWSP 450 (502)
Q Consensus 436 ~~~h~~~i~~v~~sp 450 (502)
+... ...+.++++|
T Consensus 287 ~~~~-~~~~~~~~~~ 300 (300)
T TIGR03866 287 IKVG-RLPWGVVVRP 300 (300)
T ss_pred EEcc-cccceeEeCC
Confidence 9854 5569999886
No 150
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.84 E-value=5.9e-20 Score=167.82 Aligned_cols=204 Identities=24% Similarity=0.447 Sum_probs=162.4
Q ss_pred ccCCCceEEEEEcCC-CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC-CCCEE
Q 010754 212 EGHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EGTLL 289 (502)
Q Consensus 212 ~~H~~~V~~~~~~p~-~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~-~g~~l 289 (502)
.+|++.|..++|+.. .+.||+||.|.+|++||+.++++.. ....|.+.|.++.|+| ...+|
T Consensus 240 ~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~-----------------s~~~~~k~Vq~l~wh~~~p~~L 302 (463)
T KOG0270|consen 240 SGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKS-----------------SITHHGKKVQTLEWHPYEPSVL 302 (463)
T ss_pred ccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcce-----------------ehhhcCCceeEEEecCCCceEE
Confidence 479999999999986 6799999999999999999987532 2234678899999999 56799
Q ss_pred EEEECCCeEEEEECCC-ceEEEecCccCCeEEEEEecCC-CEEEEEecCCeEEEEEcCCC-ceEEEEeeccCCeEEEEec
Q 010754 290 ATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTE-EWKQQFEFHSGPTLDVDWR 366 (502)
Q Consensus 290 ~s~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~-~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~v~~v~~~ 366 (502)
++|++|++|.+.|.+. ......-...+.|-.++|+|.. ..++++..||+|+-+|+|.. +++.++..|.++|.++++.
T Consensus 303 LsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n 382 (463)
T KOG0270|consen 303 LSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVN 382 (463)
T ss_pred EeccccceEEeeeccCccccCceEEeccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEec
Confidence 9999999999999773 1111222345789999999965 57778889999999999875 8999999999999999995
Q ss_pred C--CCEEEEEeCCCeEEEEEcCCCcceEEEecC---CCcEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCeeE
Q 010754 367 N--NVSFATSSTDNMIYVCKIGENRPIKTFAGH---QGEVNCVKWDPTGS-LLASCSDDVTAKIWNMKQDKYV 433 (502)
Q Consensus 367 ~--~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h---~~~i~~l~~sp~g~-~las~s~dg~i~iwd~~~~~~~ 433 (502)
. .+.+++++.|+.|.+|++....+-... .| -+...|.++.|+-. ++|.|+..+.++|||+.+...+
T Consensus 383 ~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~-~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V 454 (463)
T KOG0270|consen 383 IQTPGLLSTASTDKVVKLWKFDVDSPKSVK-EHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPV 454 (463)
T ss_pred CCCCcceeeccccceEEEEeecCCCCcccc-cccccccceeecccCCCcceEEEecCccceEEEeecccChhH
Confidence 5 567999999999999999766552221 12 23466777888754 5777888889999999876654
No 151
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.84 E-value=8.2e-19 Score=154.16 Aligned_cols=241 Identities=24% Similarity=0.415 Sum_probs=173.0
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEEC-------CCCCEEEE
Q 010754 219 CACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN-------GEGTLLAT 291 (502)
Q Consensus 219 ~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s-------~~g~~l~s 291 (502)
..+.|+|||..|++-+.|..+.+|++...-..... ..+... ..+...+ ......|...+|- |+.+++++
T Consensus 53 kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~-~~~~~~--~~~~~~r-~~eg~tvydy~wYs~M~s~qP~t~l~a~ 128 (406)
T KOG2919|consen 53 KGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKA-DGPLNF--SKHLSYR-YQEGETVYDYCWYSRMKSDQPSTNLFAV 128 (406)
T ss_pred ccceeCCCCceEEeecccCeeeEEecChhhcccCC-CCcccc--ccceeEE-eccCCEEEEEEeeeccccCCCccceeee
Confidence 46899999999999999999999999764322211 111110 0011001 1123457777875 67789999
Q ss_pred EECCCeEEEEEC-CCceEEEecC--cc---CCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCceEEEE-------eecc
Q 010754 292 GSYDGQARIWST-NGDLKCTLSK--HK---GPIFSLKWNKKGDYLLTGSCDKTAIVWDV-KTEEWKQQF-------EFHS 357 (502)
Q Consensus 292 ~~~dg~i~iwd~-~~~~~~~~~~--~~---~~v~~l~~~~~~~~l~s~~~d~~i~~wd~-~~~~~~~~~-------~~~~ 357 (502)
.+.+.-|++||. .++....+.. |. ..-.+++|+|+|.+|++| ..++|++||+ +.|.-...+ .+..
T Consensus 129 ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG-ykrcirvFdt~RpGr~c~vy~t~~~~k~gq~ 207 (406)
T KOG2919|consen 129 SSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQK 207 (406)
T ss_pred ccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec-ccceEEEeeccCCCCCCcchhhhhccccccc
Confidence 999999999994 5666665543 22 245789999999999876 5789999999 665432211 1235
Q ss_pred CCeEEEEecCCC--EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcC---------------------------
Q 010754 358 GPTLDVDWRNNV--SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP--------------------------- 408 (502)
Q Consensus 358 ~~v~~v~~~~~~--~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp--------------------------- 408 (502)
+.+.+++|+|-. .+++++-..++-||.-....++..+.+|.+.|+.++|.+
T Consensus 208 giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv 287 (406)
T KOG2919|consen 208 GIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPV 287 (406)
T ss_pred ceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchh
Confidence 567888887743 477777777777777777788888888888888777754
Q ss_pred --------------------CCCEEEEEeCCCcEEEEECCC-CeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEee
Q 010754 409 --------------------TGSLLASCSDDVTAKIWNMKQ-DKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARL 467 (502)
Q Consensus 409 --------------------~g~~las~s~dg~i~iwd~~~-~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~ 467 (502)
+|++|++|+.||.|++||+++ +..+..+..|+..++.++++|-=+ ++|++
T Consensus 288 ~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~mp---------ilats 358 (406)
T KOG2919|consen 288 YALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIMP---------ILATS 358 (406)
T ss_pred hhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCcccccccccccccceecCcccc---------eeeec
Confidence 456888888889999999887 777777888888999999999866 88888
Q ss_pred cCceEE
Q 010754 468 IPYFLY 473 (502)
Q Consensus 468 ~~~~~i 473 (502)
+|...+
T Consensus 359 sGqr~f 364 (406)
T KOG2919|consen 359 SGQRIF 364 (406)
T ss_pred cCceee
Confidence 876444
No 152
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.84 E-value=1.6e-19 Score=154.30 Aligned_cols=248 Identities=18% Similarity=0.260 Sum_probs=177.0
Q ss_pred eCCCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEE
Q 010754 203 IPNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW 282 (502)
Q Consensus 203 ~~~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~ 282 (502)
+|+.++.+|++|.+.|+++.|-.+++ |.+|..-|.|++|.+.+......+. ..+...|+.+.-
T Consensus 2 ~pPdP~fvLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~~~~r----------------~~g~~~it~lq~ 64 (323)
T KOG0322|consen 2 VPPDPFFVLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTERDLPLIR----------------LFGRLFITNLQS 64 (323)
T ss_pred CCCCCeeEeccccchheehhhccchh-hhcccccceEEEEEeecCccchhhh----------------hhccceeeceee
Confidence 35667889999999999999987776 8899999999999999865432211 123445777776
Q ss_pred CCCCCEEEEEECCCeEEEEECCCce---------------EEEec-----------------------------------
Q 010754 283 NGEGTLLATGSYDGQARIWSTNGDL---------------KCTLS----------------------------------- 312 (502)
Q Consensus 283 s~~g~~l~s~~~dg~i~iwd~~~~~---------------~~~~~----------------------------------- 312 (502)
-|+ ..+.+-+.|+.+.+|++.... ...+.
T Consensus 65 ~p~-d~l~tqgRd~~L~lw~ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~d 143 (323)
T KOG0322|consen 65 IPN-DSLDTQGRDPLLILWTIAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIAD 143 (323)
T ss_pred cCC-cchhhcCCCceEEEEEccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccC
Confidence 665 456677778888888754310 00000
Q ss_pred ----CccCCeEEEEEec-CCC--EEEEEecCCeEEEEEcCCCceE----------EEEeeccCCeEEEEecC-CCEEEEE
Q 010754 313 ----KHKGPIFSLKWNK-KGD--YLLTGSCDKTAIVWDVKTEEWK----------QQFEFHSGPTLDVDWRN-NVSFATS 374 (502)
Q Consensus 313 ----~~~~~v~~l~~~~-~~~--~l~s~~~d~~i~~wd~~~~~~~----------~~~~~~~~~v~~v~~~~-~~~~~~~ 374 (502)
...+.+.+..|.. ++. .+++|-.+|.+.+||+.++..+ .....|..++++++|.+ -..=++|
T Consensus 144 d~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisg 223 (323)
T KOG0322|consen 144 DSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISG 223 (323)
T ss_pred chhccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCC
Confidence 0123355555432 233 4567888999999999998433 33345888999999954 2334667
Q ss_pred eCCCeEEEEEcCCCc----ceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEcc
Q 010754 375 STDNMIYVCKIGENR----PIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSP 450 (502)
Q Consensus 375 ~~d~~i~i~d~~~~~----~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp 450 (502)
+.+..+..|.+.-.. .-..+.-....|..+.+-||++.+||++.|+.||||+.++..++..++.|+..|++++|+|
T Consensus 224 ga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfsp 303 (323)
T KOG0322|consen 224 GADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSP 303 (323)
T ss_pred CccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCC
Confidence 777888888876441 1122222345688999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccEEEEeecCceEEEE
Q 010754 451 TGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 451 ~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
+.. .+.+||.|..+.+|.
T Consensus 304 d~~-------lmAaaskD~rISLWk 321 (323)
T KOG0322|consen 304 DCE-------LMAAASKDARISLWK 321 (323)
T ss_pred CCc-------hhhhccCCceEEeee
Confidence 976 445556666666664
No 153
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83 E-value=4.9e-19 Score=154.83 Aligned_cols=199 Identities=17% Similarity=0.405 Sum_probs=157.9
Q ss_pred ceeeeCCCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeE
Q 010754 199 ESFEIPNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVT 278 (502)
Q Consensus 199 ~~~~~~~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 278 (502)
..++++...+...-.|..++.+|+|.+ ...+++|+.||.|+.+|+.++... ....|...|.
T Consensus 38 rlYdv~~~~l~~~~~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~~------------------~igth~~~i~ 98 (323)
T KOG1036|consen 38 RLYDVPANSLKLKFKHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNED------------------QIGTHDEGIR 98 (323)
T ss_pred EEEeccchhhhhheecCCceeeeeccC-CceEEEeccCceEEEEEecCCcce------------------eeccCCCceE
Confidence 345566666666677999999999996 557899999999999999987531 1234678899
Q ss_pred EEEECCCCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCce---------
Q 010754 279 TLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEW--------- 349 (502)
Q Consensus 279 ~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~--------- 349 (502)
||.+++....+++|+.|++|++||.+.............|.++..+ |+.|++|+.|..|.+||+++...
T Consensus 99 ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~kkVy~~~v~--g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~l 176 (323)
T KOG1036|consen 99 CIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQGKKVYCMDVS--GNRLVVGTSDRKVLIYDLRNLDEPFQRRESSL 176 (323)
T ss_pred EEEeeccCCeEEEcccCccEEEEeccccccccccccCceEEEEecc--CCEEEEeecCceEEEEEcccccchhhhccccc
Confidence 9999998889999999999999998865444333445578888664 67899999999999999876431
Q ss_pred ------EE---------------------------------EEeecc---------CCeEEEEecCC-CEEEEEeCCCeE
Q 010754 350 ------KQ---------------------------------QFEFHS---------GPTLDVDWRNN-VSFATSSTDNMI 380 (502)
Q Consensus 350 ------~~---------------------------------~~~~~~---------~~v~~v~~~~~-~~~~~~~~d~~i 380 (502)
+. .|+.|. -+|.+|+|+|- +.|++|+.||.|
T Consensus 177 kyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V 256 (323)
T KOG1036|consen 177 KYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIV 256 (323)
T ss_pred eeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCceE
Confidence 11 112221 15788888774 669999999999
Q ss_pred EEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeC
Q 010754 381 YVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD 418 (502)
Q Consensus 381 ~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~ 418 (502)
.+||+.+.+.+..|......|.+++|+.+|..||.++.
T Consensus 257 ~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~s 294 (323)
T KOG1036|consen 257 NIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIASS 294 (323)
T ss_pred EEccCcchhhhhhccCCCCceEEEEeccCCCeEEEEec
Confidence 99999999999999888888999999999999999874
No 154
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.82 E-value=6.3e-19 Score=161.65 Aligned_cols=246 Identities=21% Similarity=0.240 Sum_probs=187.5
Q ss_pred ceEEeccCCCceEEEEEcC-CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC
Q 010754 207 DVTILEGHTSEVCACAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p-~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~ 285 (502)
.+..+..|..+|.++.|+| +...+++.|.||+|++-|+++........ .......+..+.|+.+
T Consensus 226 ~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s---------------~~~d~~~fs~~d~~~e 290 (498)
T KOG4328|consen 226 GVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLS---------------LDTDNIWFSSLDFSAE 290 (498)
T ss_pred ceEEeccCCccccceEecCCChhheeeeccCceeeeeeecchhhHHHhh---------------cCccceeeeeccccCC
Confidence 4678889999999999999 56789999999999999998764321111 1112345788889888
Q ss_pred CCEEEEEECCCeEEEEECC--CceEEEecCccCCeEEEEEecCC-CEEEEEecCCeEEEEEcCCCceEE----EEeeccC
Q 010754 286 GTLLATGSYDGQARIWSTN--GDLKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQ----QFEFHSG 358 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~v~~l~~~~~~-~~l~s~~~d~~i~~wd~~~~~~~~----~~~~~~~ 358 (502)
...++.|..=|...+||.+ +.....+.-|...|.+|+++|.. .+|+|++.|++++|||++...... ....|..
T Consensus 291 ~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~Hrr 370 (498)
T KOG4328|consen 291 SRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRR 370 (498)
T ss_pred CccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccc
Confidence 8888888888899999966 45566677788899999999965 578899999999999998644322 3345888
Q ss_pred CeEEEEecCC-CEEEEEeCCCeEEEEEcC----CCcceEEEecCCC------cEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 010754 359 PTLDVDWRNN-VSFATSSTDNMIYVCKIG----ENRPIKTFAGHQG------EVNCVKWDPTGSLLASCSDDVTAKIWNM 427 (502)
Q Consensus 359 ~v~~v~~~~~-~~~~~~~~d~~i~i~d~~----~~~~~~~~~~h~~------~i~~l~~sp~g~~las~s~dg~i~iwd~ 427 (502)
.|.++.|+|. +.+++.+.|..|+|||.. ...+..++. |.. ......|.|+..++++|..-..|-|+|-
T Consensus 371 sV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~-Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~ 449 (498)
T KOG4328|consen 371 SVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIP-HNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDG 449 (498)
T ss_pred eeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceee-ccCcccccccchhheeCCCccEEEEeccCcceeEEcC
Confidence 9999999874 559999999999999983 444555554 432 2345689999999999999999999999
Q ss_pred CCCeeEEEeccCCC-cEEE-EEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 428 KQDKYVHDLREHSK-EIYT-IRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 428 ~~~~~~~~~~~h~~-~i~~-v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
..++.+..+..... .|.+ ..|+|.+. .++|++...+++|++
T Consensus 450 ~~~q~v~el~~P~~~tI~~vn~~HP~~~--------~~~aG~~s~Gki~vf 492 (498)
T KOG4328|consen 450 NGGQMVCELHDPESSTIPSVNEFHPMRD--------TLAAGGNSSGKIYVF 492 (498)
T ss_pred CCCEEeeeccCccccccccceeeccccc--------ceeccCCccceEEEE
Confidence 99998888753332 4544 57999876 355555566777754
No 155
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.82 E-value=2.2e-18 Score=149.32 Aligned_cols=230 Identities=27% Similarity=0.478 Sum_probs=171.7
Q ss_pred cCCCceEEEEEcCCC-----CeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC-CC
Q 010754 213 GHTSEVCACAWSPAG-----SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EG 286 (502)
Q Consensus 213 ~H~~~V~~~~~~p~~-----~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~-~g 286 (502)
.|.-+++.+.|.|+. .+|||++ ..+|+|.+.........+ ..+ .......+..++++..|+. +-
T Consensus 94 d~~YP~tK~~wiPd~~g~~pdlLATs~--D~LRlWri~~ee~~~~~~------~~L--~~~kns~~~aPlTSFDWne~dp 163 (364)
T KOG0290|consen 94 DHPYPVTKLMWIPDSKGVYPDLLATSS--DFLRLWRIGDEESRVELQ------SVL--NNNKNSEFCAPLTSFDWNEVDP 163 (364)
T ss_pred CCCCCccceEecCCccccCcchhhccc--CeEEEEeccCcCCceehh------hhh--ccCcccccCCcccccccccCCc
Confidence 578899999999975 3677665 379999987432110000 001 1112334567899999997 67
Q ss_pred CEEEEEECCCeEEEEECCCc----eEEEecCccCCeEEEEEecCC-CEEEEEecCCeEEEEEcCCCceEEEEee---ccC
Q 010754 287 TLLATGSYDGQARIWSTNGD----LKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQQFEF---HSG 358 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~v~~l~~~~~~-~~l~s~~~d~~i~~wd~~~~~~~~~~~~---~~~ 358 (502)
++|.+++-|.+..|||++.. ....+..|...|+.++|...+ +.|++++.||+|++||++....-..+.. ...
T Consensus 164 ~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~ 243 (364)
T KOG0290|consen 164 NLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPST 243 (364)
T ss_pred ceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCC
Confidence 89999999999999998753 466788999999999999865 6889999999999999998654433322 245
Q ss_pred CeEEEEecCCC--EEEEEe-CCCeEEEEEcCCC-cceEEEecCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEECCCCe--
Q 010754 359 PTLDVDWRNNV--SFATSS-TDNMIYVCKIGEN-RPIKTFAGHQGEVNCVKWDPT-GSLLASCSDDVTAKIWNMKQDK-- 431 (502)
Q Consensus 359 ~v~~v~~~~~~--~~~~~~-~d~~i~i~d~~~~-~~~~~~~~h~~~i~~l~~sp~-g~~las~s~dg~i~iwd~~~~~-- 431 (502)
+...++|.+.. .+++-. ....|.|.|++.. .++..+.+|.+.|++|+|.|. ...|+||++|..+-|||+.+.-
T Consensus 244 pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~ 323 (364)
T KOG0290|consen 244 PLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRE 323 (364)
T ss_pred cceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEeccccccc
Confidence 78889996543 345443 4457899999865 688999999999999999996 5689999999999999986532
Q ss_pred ----eEEEeccCCCcEEEEEEccCCC
Q 010754 432 ----YVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 432 ----~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
++..+. -.+.|+.+.|+|.-.
T Consensus 324 ~~~dPilay~-a~~EVNqi~Ws~~~~ 348 (364)
T KOG0290|consen 324 NGEDPILAYT-AGGEVNQIQWSSSQP 348 (364)
T ss_pred CCCCchhhhh-ccceeeeeeecccCC
Confidence 222333 456799999998765
No 156
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.81 E-value=2e-18 Score=151.26 Aligned_cols=191 Identities=19% Similarity=0.277 Sum_probs=157.3
Q ss_pred eEEEEECCCCCEEEEEECCCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEee
Q 010754 277 VTTLDWNGEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF 355 (502)
Q Consensus 277 v~~l~~s~~g~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 355 (502)
..|+.|++.|.+||+|+.||.|.|||+.+ .....+.+|..+|.+++|+++|+.|+|++.|..|.+||+..|.+++.+.
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir- 104 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR- 104 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE-
Confidence 78999999999999999999999999875 4456788999999999999999999999999999999999999998887
Q ss_pred ccCCeEEEEecCC--CEEEEEeCCCeEEEEEcCCCcceEEEecC------CCcEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 010754 356 HSGPTLDVDWRNN--VSFATSSTDNMIYVCKIGENRPIKTFAGH------QGEVNCVKWDPTGSLLASCSDDVTAKIWNM 427 (502)
Q Consensus 356 ~~~~v~~v~~~~~--~~~~~~~~d~~i~i~d~~~~~~~~~~~~h------~~~i~~l~~sp~g~~las~s~dg~i~iwd~ 427 (502)
..++|..+.|+|. +.++++-.+..-.+.++... .+++-.. .....+..|++.|+++++|...|.+.++|.
T Consensus 105 f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~--~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a 182 (405)
T KOG1273|consen 105 FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDP--KHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDA 182 (405)
T ss_pred ccCccceeeeccccCCeEEEEEecCCcEEEEecCC--ceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEec
Confidence 5678999999774 44666555555666666542 2222111 112234468999999999999999999999
Q ss_pred CCCeeEEEeccCC-CcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 428 KQDKYVHDLREHS-KEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 428 ~~~~~~~~~~~h~-~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
.+.+++..++-.+ ..|.++.++-.|. .+++-++|..++.+...
T Consensus 183 ~t~e~vas~rits~~~IK~I~~s~~g~-------~liiNtsDRvIR~ye~~ 226 (405)
T KOG1273|consen 183 ETLECVASFRITSVQAIKQIIVSRKGR-------FLIINTSDRVIRTYEIS 226 (405)
T ss_pred chheeeeeeeechheeeeEEEEeccCc-------EEEEecCCceEEEEehh
Confidence 9999999998665 7899999999998 78888888989888543
No 157
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.81 E-value=8e-19 Score=163.77 Aligned_cols=228 Identities=19% Similarity=0.304 Sum_probs=171.0
Q ss_pred cCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEE
Q 010754 213 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG 292 (502)
Q Consensus 213 ~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~ 292 (502)
.|...|.||.|+.....+.+++.+-.++-|++.+..... ....+-.+....++.....+. -.....++.+
T Consensus 12 r~~e~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s~~~-~~~p~df~pt~~h~~~rs~~~---------g~~~d~~~i~ 81 (737)
T KOG1524|consen 12 RNSEKVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDSVEV-AKLPDDFVPTDMHLGGRSSGG---------GKGSDTLLIC 81 (737)
T ss_pred ccceeEEeecccccceEEEeccCceEEEeecccchhhhh-hhCCcccCCccccccccccCC---------CCCcceEEEE
Confidence 466778899999888777777666556666665433211 100000000000111100000 0123478889
Q ss_pred ECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEE
Q 010754 293 SYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFA 372 (502)
Q Consensus 293 ~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~ 372 (502)
+.||.+.|.+..++.......|.+.|.+-.|+|+|.-|++++.||.|++|. ++|-...++.....+|.++.|.|+..-+
T Consensus 82 s~DGkf~il~k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~~v~c~~W~p~S~~v 160 (737)
T KOG1524|consen 82 SNDGRFVILNKSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEESIRCARWAPNSNSI 160 (737)
T ss_pred cCCceEEEecccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCceeEEEEECCCCCce
Confidence 999999999999998889999999999999999999999999999999998 6676666666677899999998876544
Q ss_pred EEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCC
Q 010754 373 TSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTG 452 (502)
Q Consensus 373 ~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g 452 (502)
.-+..+.+.|=.+.....+-.+++|.+-|.++.|++...++++|++|-..+|||. .|..+..-..|..+|++++|.|+.
T Consensus 161 l~c~g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~-~G~~Lf~S~~~ey~ITSva~npd~ 239 (737)
T KOG1524|consen 161 VFCQGGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDA-QGANLFTSAAEEYAITSVAFNPEK 239 (737)
T ss_pred EEecCCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecc-cCcccccCChhccceeeeeecccc
Confidence 4556677888788777777889999999999999999999999999999999995 466666777899999999999983
No 158
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.81 E-value=4.5e-18 Score=163.49 Aligned_cols=254 Identities=19% Similarity=0.311 Sum_probs=197.3
Q ss_pred EEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCE
Q 010754 209 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 288 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~ 288 (502)
..+.||.+.|..++|+|.|.+|++.|.|-+-|++---..+. .-+-....+-|..+++|++|-+....
T Consensus 355 ~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~-------------~wHEiaRPQiHGyDl~c~~~vn~~~~ 421 (764)
T KOG1063|consen 355 PVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQ-------------EWHEIARPQIHGYDLTCLSFVNEDLQ 421 (764)
T ss_pred cccccccccceeeeecCCCCEEEEeccccceeeeccccccc-------------ceeeecccccccccceeeehccCCce
Confidence 45679999999999999999999999999999986542111 02233444567788999999886667
Q ss_pred EEEEECCCeEEEEECC-----------C---------------------------------c------------------
Q 010754 289 LATGSYDGQARIWSTN-----------G---------------------------------D------------------ 306 (502)
Q Consensus 289 l~s~~~dg~i~iwd~~-----------~---------------------------------~------------------ 306 (502)
+++|.....+|+|+.. + .
T Consensus 422 FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ 501 (764)
T KOG1063|consen 422 FVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELT 501 (764)
T ss_pred eeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhcc
Confidence 8888888899999531 0 0
Q ss_pred ---------------eEEEecCccCCeEEEEEecCCCEEEEEecCC-----eEEEEEcCCCceEEEEeeccCCeEEEEec
Q 010754 307 ---------------LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDK-----TAIVWDVKTEEWKQQFEFHSGPTLDVDWR 366 (502)
Q Consensus 307 ---------------~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~-----~i~~wd~~~~~~~~~~~~~~~~v~~v~~~ 366 (502)
.+..+.+|...|++++.+|+++.+++++... .|++|+..+...++.+.+|+-.|+.+.|+
T Consensus 502 ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FS 581 (764)
T KOG1063|consen 502 EPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFS 581 (764)
T ss_pred CCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEEC
Confidence 0112335888899999999999999988653 69999999888888999999999999998
Q ss_pred CCCE-EEEEeCCCeEEEEEcCCCcc----eEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCC--eeEEEe--c
Q 010754 367 NNVS-FATSSTDNMIYVCKIGENRP----IKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD--KYVHDL--R 437 (502)
Q Consensus 367 ~~~~-~~~~~~d~~i~i~d~~~~~~----~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~--~~~~~~--~ 437 (502)
|+++ +++.+.|+++.+|....... ....+.|+.-|..+.|+|++.++||+|.|.+|+||..... +++..+ .
T Consensus 582 pdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~~a~~ 661 (764)
T KOG1063|consen 582 PDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISRFACL 661 (764)
T ss_pred CCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhhhchh
Confidence 8765 77889999999999865421 2336789999999999999999999999999999998877 555442 2
Q ss_pred cCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 438 EHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 438 ~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
.++.+|+.++|.|--. ......+.+|-..|.+.+|.+.
T Consensus 662 ~~~~aVTAv~~~~~~~--~e~~~~vavGle~GeI~l~~~~ 699 (764)
T KOG1063|consen 662 KFSLAVTAVAYLPVDH--NEKGDVVAVGLEKGEIVLWRRK 699 (764)
T ss_pred ccCCceeeEEeecccc--ccccceEEEEecccEEEEEecc
Confidence 5888999999998643 1111234555566888888754
No 159
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.81 E-value=7.8e-18 Score=156.19 Aligned_cols=244 Identities=20% Similarity=0.305 Sum_probs=186.4
Q ss_pred CCCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEEC
Q 010754 204 PNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN 283 (502)
Q Consensus 204 ~~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s 283 (502)
......+..||.+....++.+|+..+++|++.|+.+++|+ +.+.. -.+. ...++.|+.|+
T Consensus 357 ~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~-----------wt~~-------~~d~~~~~~fh 416 (626)
T KOG2106|consen 357 ENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLE-----------WTKI-------IEDPAECADFH 416 (626)
T ss_pred cCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCcee-----------EEEE-------ecCceeEeecc
Confidence 3444556789999999999999999999999999999999 22211 0111 13568999999
Q ss_pred CCCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCce-EEE-EeeccCCeE
Q 010754 284 GEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEW-KQQ-FEFHSGPTL 361 (502)
Q Consensus 284 ~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~-~~~-~~~~~~~v~ 361 (502)
|.| .+|.|+..|...+.|.+............++++++|+|+|.+|+.|+.|+.|++|.+..... ... -..+..+|+
T Consensus 417 psg-~va~Gt~~G~w~V~d~e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~it 495 (626)
T KOG2106|consen 417 PSG-VVAVGTATGRWFVLDTETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPIT 495 (626)
T ss_pred Ccc-eEEEeeccceEEEEecccceeEEEEecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeE
Confidence 999 99999999999999998877766666689999999999999999999999999999865432 222 233558899
Q ss_pred EEEecCCCE-EEEEeCCCeEEEEEcCCCcceE-----------------EE-ecCCCcEEEEEEcCCCCEEEEEeCCCcE
Q 010754 362 DVDWRNNVS-FATSSTDNMIYVCKIGENRPIK-----------------TF-AGHQGEVNCVKWDPTGSLLASCSDDVTA 422 (502)
Q Consensus 362 ~v~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~-----------------~~-~~h~~~i~~l~~sp~g~~las~s~dg~i 422 (502)
.++|+++.. +.+-+.|-.|..|....-+.+. .+ ..+...|+.++-+.+.+++|+|.+.|.|
T Consensus 496 hLDwS~Ds~~~~~~S~d~eiLyW~~~~~~~~ts~kDvkW~t~~c~lGF~v~g~s~~t~i~a~~rs~~~~~lA~gdd~g~v 575 (626)
T KOG2106|consen 496 HLDWSSDSQFLVSNSGDYEILYWKPSECKQITSVKDVKWATYTCTLGFEVFGGSDGTDINAVARSHCEKLLASGDDFGKV 575 (626)
T ss_pred EeeecCCCceEEeccCceEEEEEccccCcccceecceeeeeeEEEEEEEEecccCCchHHHhhhhhhhhhhhccccCceE
Confidence 999988766 4556778889999443222111 11 1244557777778888999999999999
Q ss_pred EEEECCC---CeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 423 KIWNMKQ---DKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 423 ~iwd~~~---~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
++|...- ....+.+.+|++-|++++|.-..+ .+++...|..+..|.
T Consensus 576 ~lf~yPc~s~rA~~he~~ghs~~vt~V~Fl~~d~-------~li~tg~D~Si~qW~ 624 (626)
T KOG2106|consen 576 HLFSYPCSSPRAPSHEYGGHSSHVTNVAFLCKDS-------HLISTGKDTSIMQWR 624 (626)
T ss_pred EEEccccCCCcccceeeccccceeEEEEEeeCCc-------eEEecCCCceEEEEE
Confidence 9998643 234577789999999999999877 555555666677775
No 160
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.80 E-value=1.8e-17 Score=144.97 Aligned_cols=204 Identities=20% Similarity=0.398 Sum_probs=155.1
Q ss_pred cCCCCeEEEEECCCCCEEEEEECCCeEEEEECCC-----ceEEEecCccCCeEEEEEec--CCCEEEEEecCCeEEEEEc
Q 010754 272 EKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG-----DLKCTLSKHKGPIFSLKWNK--KGDYLLTGSCDKTAIVWDV 344 (502)
Q Consensus 272 ~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~-----~~~~~~~~~~~~v~~l~~~~--~~~~l~s~~~d~~i~~wd~ 344 (502)
+|..-|+++.|.+.|+.+|+|+.|++|+|||.+. .+......|.+.|..+.|.+ -|+.+++++.|+++.||.-
T Consensus 11 ~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE 90 (361)
T KOG2445|consen 11 GHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEE 90 (361)
T ss_pred CCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeee
Confidence 4556699999999999999999999999999542 24446678999999999976 5799999999999999975
Q ss_pred CC-------Cc--eEEEEeeccCCeEEEEecCC---CEEEEEeCCCeEEEEEcCCCcceE------EEe-------cCCC
Q 010754 345 KT-------EE--WKQQFEFHSGPTLDVDWRNN---VSFATSSTDNMIYVCKIGENRPIK------TFA-------GHQG 399 (502)
Q Consensus 345 ~~-------~~--~~~~~~~~~~~v~~v~~~~~---~~~~~~~~d~~i~i~d~~~~~~~~------~~~-------~h~~ 399 (502)
.. .+ ...++....+.|++|.|.|. -.+++++.||.++||+......+. .+. .+..
T Consensus 91 ~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~ 170 (361)
T KOG2445|consen 91 QEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQ 170 (361)
T ss_pred cccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccC
Confidence 21 12 23345557788999999875 459999999999999976543221 222 3556
Q ss_pred cEEEEEEcCC---CCEEEEEeCC-----CcEEEEECCCC----eeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEee
Q 010754 400 EVNCVKWDPT---GSLLASCSDD-----VTAKIWNMKQD----KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARL 467 (502)
Q Consensus 400 ~i~~l~~sp~---g~~las~s~d-----g~i~iwd~~~~----~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~ 467 (502)
+..|+.|+|. ..+||.|+.+ +.++||....+ ..+.++.+|+.+|++|+|.|+-. ..-+.+.+|+.
T Consensus 171 ~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~G---r~y~~lAvA~k 247 (361)
T KOG2445|consen 171 PCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIG---RSYHLLAVATK 247 (361)
T ss_pred cceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccC---CceeeEEEeec
Confidence 7889999974 4678888876 57899976432 34567779999999999999743 34455566666
Q ss_pred cCceEEEEeeeE
Q 010754 468 IPYFLYWICSIY 479 (502)
Q Consensus 468 ~~~~~iw~~~~~ 479 (502)
|| ++||.....
T Consensus 248 Dg-v~I~~v~~~ 258 (361)
T KOG2445|consen 248 DG-VRIFKVKVA 258 (361)
T ss_pred Cc-EEEEEEeec
Confidence 66 999876643
No 161
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.80 E-value=4.8e-18 Score=168.31 Aligned_cols=199 Identities=24% Similarity=0.402 Sum_probs=163.9
Q ss_pred cCCCCeEEEEECCCCCEEEEEECCCeEEEEECCCc------------eEE------------------------------
Q 010754 272 EKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD------------LKC------------------------------ 309 (502)
Q Consensus 272 ~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~------------~~~------------------------------ 309 (502)
.|....+.++|.|+|++|++++.||.|++|+.... .+.
T Consensus 11 aht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~~~~~ 90 (933)
T KOG1274|consen 11 AHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYSNHFLTGSEQNTVLRYKFPSGEEDT 90 (933)
T ss_pred hccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeecccceEEeeccceEEEeeCCCCCccc
Confidence 45566888889999888888988999999863211 000
Q ss_pred EecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCE-EEEEeCCCeEEEEEcCCC
Q 010754 310 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGEN 388 (502)
Q Consensus 310 ~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~~~~d~~i~i~d~~~~ 388 (502)
.+....-++.+++|+-+|++++.|+.|-.|++.++........+.+|.++|.++.|.|++. +++.+.||.|++|++.++
T Consensus 91 iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~ 170 (933)
T KOG1274|consen 91 ILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDG 170 (933)
T ss_pred eeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccc
Confidence 1112345789999999999999999999999999999999999999999999999988655 677889999999999998
Q ss_pred cceEEEecC--------CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEec--cCCCcEEEEEEccCCCCCCCC
Q 010754 389 RPIKTFAGH--------QGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR--EHSKEIYTIRWSPTGSGTNNP 458 (502)
Q Consensus 389 ~~~~~~~~h--------~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~--~h~~~i~~v~~sp~g~~~~~~ 458 (502)
....++.+- ...++.++|+|+|..|+..+.|+.|++|+...+.....++ .+.+.+..+.|+|.|.
T Consensus 171 ~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~----- 245 (933)
T KOG1274|consen 171 ILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGK----- 245 (933)
T ss_pred hhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCc-----
Confidence 877666542 3456789999998888888999999999999999888776 3455599999999998
Q ss_pred CccEEEEeecCceEEEEee
Q 010754 459 NQQLILARLIPYFLYWICS 477 (502)
Q Consensus 459 ~~~l~las~~~~~~iw~~~ 477 (502)
+|..++.++.+.||++.
T Consensus 246 --YiAAs~~~g~I~vWnv~ 262 (933)
T KOG1274|consen 246 --YIAASTLDGQILVWNVD 262 (933)
T ss_pred --EEeeeccCCcEEEEecc
Confidence 77777778999999877
No 162
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.80 E-value=1.1e-18 Score=161.52 Aligned_cols=236 Identities=17% Similarity=0.273 Sum_probs=181.3
Q ss_pred eEEEEEcCCCC-eEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCC
Q 010754 218 VCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDG 296 (502)
Q Consensus 218 V~~~~~~p~~~-~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg 296 (502)
|..+.|+.... .+++.+.|..+++|.-... ... +....... ...-.|++......++++|+..+
T Consensus 37 ~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~--~~~-------Vp~~~k~~------gd~~~Cv~~~s~S~y~~sgG~~~ 101 (673)
T KOG4378|consen 37 DFSFNWQRRNFLVVASMAGDKVMRIKEKDGK--TPE-------VPRVRKLT------GDNAFCVACASQSLYEISGGQSG 101 (673)
T ss_pred ceeeeccccceEEEeecCCceeEEEecccCC--CCc-------cceeeccc------cchHHHHhhhhcceeeeccCcCc
Confidence 88999997653 3445567888999974432 110 00111111 11344555555568999999999
Q ss_pred eEEEEECCCce-EEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCC-eEEEEecCCCE--EE
Q 010754 297 QARIWSTNGDL-KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP-TLDVDWRNNVS--FA 372 (502)
Q Consensus 297 ~i~iwd~~~~~-~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~-v~~v~~~~~~~--~~ 372 (502)
.|+|||++.++ ...+..|.+.|+++.++-...||++++..|.|.|..+.++..-..|....+. |.-+.|++..+ +.
T Consensus 102 ~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~ 181 (673)
T KOG4378|consen 102 CVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLS 181 (673)
T ss_pred eeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceeeE
Confidence 99999998654 4567899999999999999999999999999999999998877777765444 55788877544 67
Q ss_pred EEeCCCeEEEEEcCCCcceEEE-ecCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEcc
Q 010754 373 TSSTDNMIYVCKIGENRPIKTF-AGHQGEVNCVKWDPTG-SLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSP 450 (502)
Q Consensus 373 ~~~~d~~i~i~d~~~~~~~~~~-~~h~~~i~~l~~sp~g-~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp 450 (502)
+++.+|.|.+||+....++..+ ..|..+...|+|+|.. .+|++.+.|..|.+||++..+....+. ...|..+++|++
T Consensus 182 ~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~-y~~Plstvaf~~ 260 (673)
T KOG4378|consen 182 IASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLT-YSHPLSTVAFSE 260 (673)
T ss_pred eeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceee-ecCCcceeeecC
Confidence 8899999999999988887655 5789999999999965 578899999999999999887777765 566899999999
Q ss_pred CCCCCCCCCccEEEEeecCceEEEEe
Q 010754 451 TGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 451 ~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
+|. .|+.|+.-|.+..|+.
T Consensus 261 ~G~-------~L~aG~s~G~~i~YD~ 279 (673)
T KOG4378|consen 261 CGT-------YLCAGNSKGELIAYDM 279 (673)
T ss_pred Cce-------EEEeecCCceEEEEec
Confidence 998 6666666677777753
No 163
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.79 E-value=5.4e-18 Score=162.07 Aligned_cols=239 Identities=17% Similarity=0.278 Sum_probs=187.2
Q ss_pred CceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC
Q 010754 206 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 206 ~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~ 285 (502)
..+.+|+||++.|+|++|+.+|+++|+|+.|..|.+|+-.-... ....|...|.||.|+|-
T Consensus 44 ~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~-------------------LkYSH~D~IQCMsFNP~ 104 (1081)
T KOG1538|consen 44 TLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGI-------------------LKYSHNDAIQCMSFNPI 104 (1081)
T ss_pred ccccccccccceEEEEEEccCCceeccCCCceeEEEecccccce-------------------eeeccCCeeeEeecCch
Confidence 45789999999999999999999999999999999998442111 11246778999999999
Q ss_pred CCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEee---ccCCeEE
Q 010754 286 GTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF---HSGPTLD 362 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~---~~~~v~~ 362 (502)
...|++|+- ...-+|+...+.+.... ....|.+++|..+|.+|+.|-.+|+|.+-+- +++....+.. ...+|.+
T Consensus 105 ~h~LasCsL-sdFglWS~~qK~V~K~k-ss~R~~~CsWtnDGqylalG~~nGTIsiRNk-~gEek~~I~Rpgg~Nspiws 181 (1081)
T KOG1538|consen 105 THQLASCSL-SDFGLWSPEQKSVSKHK-SSSRIICCSWTNDGQYLALGMFNGTISIRNK-NGEEKVKIERPGGSNSPIWS 181 (1081)
T ss_pred HHHhhhcch-hhccccChhhhhHHhhh-hheeEEEeeecCCCcEEEEeccCceEEeecC-CCCcceEEeCCCCCCCCceE
Confidence 999999886 45678987655443322 3456889999999999999999999999864 4544444443 6678999
Q ss_pred EEecCC------CEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q 010754 363 VDWRNN------VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDL 436 (502)
Q Consensus 363 v~~~~~------~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~ 436 (502)
++|+|. ..+++.....++.+|.+. |+.+..-+.-.-...|+.+.|+|.++..|+.|+.+++|- +.|-.+.++
T Consensus 182 i~~~p~sg~G~~di~aV~DW~qTLSFy~Ls-G~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fT-R~GvrLGTv 259 (1081)
T KOG1538|consen 182 ICWNPSSGEGRNDILAVADWGQTLSFYQLS-GKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFT-RDGVRLGTV 259 (1081)
T ss_pred EEecCCCCCCccceEEEEeccceeEEEEec-ceeecccccCCCCchhheeccCCcEEEEccCCCceEEEe-ecCeEEeec
Confidence 999774 346777777777777764 333333333344567899999999999999999999997 667777777
Q ss_pred ccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 437 REHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 437 ~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
-.....|++++..|+++ ....|+.||++..++
T Consensus 260 g~~D~WIWtV~~~PNsQ-------~v~~GCqDGTiACyN 291 (1081)
T KOG1538|consen 260 GEQDSWIWTVQAKPNSQ-------YVVVGCQDGTIACYN 291 (1081)
T ss_pred cccceeEEEEEEccCCc-------eEEEEEccCeeehhh
Confidence 77788999999999998 888999999988775
No 164
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.79 E-value=6.4e-18 Score=161.03 Aligned_cols=239 Identities=17% Similarity=0.244 Sum_probs=172.4
Q ss_pred EEEEcC---CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCC
Q 010754 220 ACAWSP---AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDG 296 (502)
Q Consensus 220 ~~~~~p---~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg 296 (502)
++.|++ ..++|+.+..||.|.++|....... .-.........|...|..+.|.|....|++++.|.
T Consensus 54 ~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr-----------~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDs 122 (720)
T KOG0321|consen 54 ADSFSAAPNKEHILAVADEDGGIILFDTKSIVFR-----------LEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDS 122 (720)
T ss_pred cccccCCCCccceEEEecCCCceeeecchhhhcc-----------hhhhhhcccccccceeEeeccCCCceeEEEccCCc
Confidence 456665 3468999999999999998764321 00011233456788999999999777899999999
Q ss_pred eEEEEECCCc-eEE--EecCccCCeEEEEEecCC-CEEEEEecCCeEEEEEcCCCce-------EEEE------------
Q 010754 297 QARIWSTNGD-LKC--TLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEW-------KQQF------------ 353 (502)
Q Consensus 297 ~i~iwd~~~~-~~~--~~~~~~~~v~~l~~~~~~-~~l~s~~~d~~i~~wd~~~~~~-------~~~~------------ 353 (502)
++++||+.+. +.. .+.+|.+.|.++||.|.. ..|++|+.||.|.|||++-... ...+
T Consensus 123 T~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp 202 (720)
T KOG0321|consen 123 TIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKP 202 (720)
T ss_pred eeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCch
Confidence 9999998753 333 378999999999999955 6788999999999999864320 0000
Q ss_pred --------eec----cCCeEEEEecCCCEEEEEeC-CCeEEEEEcCCCcce--------EEEecC---CCcEEEEEEcCC
Q 010754 354 --------EFH----SGPTLDVDWRNNVSFATSST-DNMIYVCKIGENRPI--------KTFAGH---QGEVNCVKWDPT 409 (502)
Q Consensus 354 --------~~~----~~~v~~v~~~~~~~~~~~~~-d~~i~i~d~~~~~~~--------~~~~~h---~~~i~~l~~sp~ 409 (502)
..+ .+.|+.+.|.++..+++++. |+.|+|||++..... ..+..| .-.++++..+..
T Consensus 203 ~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDss 282 (720)
T KOG0321|consen 203 LKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSS 282 (720)
T ss_pred hhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCC
Confidence 001 12366788888999999887 999999999976432 223333 235788888888
Q ss_pred CCEEEEEeCCCcEEEEECCCCe--eEEEeccCCCc--EEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 410 GSLLASCSDDVTAKIWNMKQDK--YVHDLREHSKE--IYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 410 g~~las~s~dg~i~iwd~~~~~--~~~~~~~h~~~--i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
|.+|.+.+.|+.|++||+.+-. ++..+.++-.. -..-..+||+. .++.|+.+....+|..
T Consensus 283 Gt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~-------~l~SgSsd~~ayiw~v 346 (720)
T KOG0321|consen 283 GTYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDC-------SLLSGSSDEQAYIWVV 346 (720)
T ss_pred CCeEEEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCc-------eEeccCCCcceeeeee
Confidence 9998888889999999997643 33444433211 12234788887 8889999999999964
No 165
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.79 E-value=4.3e-19 Score=179.90 Aligned_cols=210 Identities=23% Similarity=0.370 Sum_probs=168.9
Q ss_pred ceEEeccCCCceEEEEEcCC-CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC
Q 010754 207 DVTILEGHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~-~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~ 285 (502)
.+..+..|++.|..+.|++. +++||+|+.||.|.|||+.+-+.-... ........|.+++|+..
T Consensus 108 ~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~---------------~~~~~~~eI~~lsWNrk 172 (1049)
T KOG0307|consen 108 VLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTP---------------GSQAPPSEIKCLSWNRK 172 (1049)
T ss_pred HHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCC---------------CCCCCcccceEeccchh
Confidence 35677889999999999996 569999999999999999874321100 01223567999999984
Q ss_pred -CCEEEEEECCCeEEEEECCCc-eEEEecCcc--CCeEEEEEecCC-CEEEEEecCC---eEEEEEcCCC-ceEEEEeec
Q 010754 286 -GTLLATGSYDGQARIWSTNGD-LKCTLSKHK--GPIFSLKWNKKG-DYLLTGSCDK---TAIVWDVKTE-EWKQQFEFH 356 (502)
Q Consensus 286 -g~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~--~~v~~l~~~~~~-~~l~s~~~d~---~i~~wd~~~~-~~~~~~~~~ 356 (502)
...|++++.+|.+.|||++.+ .+..+..+. ..+..+.|+|+. ..|++++.|. .|.+||+|.- ..++.+.+|
T Consensus 173 vqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H 252 (1049)
T KOG0307|consen 173 VSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGH 252 (1049)
T ss_pred hhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhccc
Confidence 457889999999999998854 344444443 357899999977 5666666654 6999999754 467778899
Q ss_pred cCCeEEEEecCC--CEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCe
Q 010754 357 SGPTLDVDWRNN--VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS-LLASCSDDVTAKIWNMKQDK 431 (502)
Q Consensus 357 ~~~v~~v~~~~~--~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~-~las~s~dg~i~iwd~~~~~ 431 (502)
...|.++.|.+. ..+++++.|+.|.+|+..+++.+..+....+.+..+.|+|... .++.++-||.|.|+.+....
T Consensus 253 ~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 253 QRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred ccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence 999999999654 5688999999999999999999999998889999999999766 78888999999999986544
No 166
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.79 E-value=8.8e-18 Score=148.09 Aligned_cols=239 Identities=18% Similarity=0.359 Sum_probs=175.2
Q ss_pred cCCCceEEEEEcCC----CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC-C
Q 010754 213 GHTSEVCACAWSPA----GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG-T 287 (502)
Q Consensus 213 ~H~~~V~~~~~~p~----~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g-~ 287 (502)
.|...-+.|+|+-+ ..+||.|+.-|.|+|.|+.+++. .....+|...|..+.++|+. +
T Consensus 87 d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~-----------------~~~~~ghG~sINeik~~p~~~q 149 (385)
T KOG1034|consen 87 DHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQC-----------------SKNYRGHGGSINEIKFHPDRPQ 149 (385)
T ss_pred CCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhh-----------------ccceeccCccchhhhcCCCCCc
Confidence 37788899999874 34889999999999999988763 33445678899999999965 6
Q ss_pred EEEEEECCCeEEEEECCCceE-EE---ecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEE----------
Q 010754 288 LLATGSYDGQARIWSTNGDLK-CT---LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF---------- 353 (502)
Q Consensus 288 ~l~s~~~dg~i~iwd~~~~~~-~~---~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~---------- 353 (502)
++++|+.|..|++|+++.... .. +.+|...|.++.|+++|.+|++++.|.++++|++...+....+
T Consensus 150 lvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~ 229 (385)
T KOG1034|consen 150 LVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNK 229 (385)
T ss_pred EEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCC
Confidence 899999999999999886543 33 3579999999999999999999999999999999743321111
Q ss_pred ------------------eeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCC-c-------------ceEEEecCCCcE
Q 010754 354 ------------------EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGEN-R-------------PIKTFAGHQGEV 401 (502)
Q Consensus 354 ------------------~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~-~-------------~~~~~~~h~~~i 401 (502)
..|...|-++.|-. +.+++-+.++.|..|....- + .+..+.-....|
T Consensus 230 t~~pfpt~~~~fp~fst~diHrnyVDCvrw~g-d~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~i 308 (385)
T KOG1034|consen 230 TTRPFPTPKTHFPDFSTTDIHRNYVDCVRWFG-DFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDI 308 (385)
T ss_pred ccCcCCccccccccccccccccchHHHHHHHh-hheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccce
Confidence 11333344444443 45677788899999987321 1 123333344455
Q ss_pred EEE--EEcCCCCEEEEEeCCCcEEEEECCCCeeEE--Eec--cCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 402 NCV--KWDPTGSLLASCSDDVTAKIWNMKQDKYVH--DLR--EHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 402 ~~l--~~sp~g~~las~s~dg~i~iwd~~~~~~~~--~~~--~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
.-| +|+|-+++||.|...|.|++||++...+.. ++. .....|...+||.||+ .|++.+.++.+..|+
T Consensus 309 Wfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs-------~lv~vcdd~~Vwrwd 381 (385)
T KOG1034|consen 309 WFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGS-------ILVLVCDDGTVWRWD 381 (385)
T ss_pred EEEEEeecHHHHHHhhccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCc-------EEEEEeCCCcEEEEE
Confidence 555 456778999999999999999998766531 221 2245699999999999 666777777766665
Q ss_pred e
Q 010754 476 C 476 (502)
Q Consensus 476 ~ 476 (502)
.
T Consensus 382 r 382 (385)
T KOG1034|consen 382 R 382 (385)
T ss_pred e
Confidence 3
No 167
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.78 E-value=4.2e-16 Score=155.01 Aligned_cols=243 Identities=29% Similarity=0.538 Sum_probs=197.3
Q ss_pred EeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCC-ccCCCCCCCceeEEEeeecCccccCCCCeEEEEE-CCCCC
Q 010754 210 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGT-SNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW-NGEGT 287 (502)
Q Consensus 210 ~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-s~~g~ 287 (502)
.+.+|...|.++.+.+.+..++.++.|+.+.+|+..... .. ..+... +...+..+.+ ++++.
T Consensus 60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-------------~~~~~~---~~~~~~~~~~~~~~~~ 123 (466)
T COG2319 60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLI-------------KSLEGL---HDSSVSKLALSSPDGN 123 (466)
T ss_pred eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeE-------------EEEecc---CCCceeeEEEECCCcc
Confidence 567899999999999999999999999999999988764 11 111110 0134666666 78887
Q ss_pred -EEEEEEC-CCeEEEEECCC--ceEEEecCccCCeEEEEEecCCCEEEEEec-CCeEEEEEcCCCceEEEEeeccCCeEE
Q 010754 288 -LLATGSY-DGQARIWSTNG--DLKCTLSKHKGPIFSLKWNKKGDYLLTGSC-DKTAIVWDVKTEEWKQQFEFHSGPTLD 362 (502)
Q Consensus 288 -~l~s~~~-dg~i~iwd~~~--~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~-d~~i~~wd~~~~~~~~~~~~~~~~v~~ 362 (502)
.++..+. |+.+.+|+... .....+..|...|..++|+|++.++++++. |+.+++|++..+..+..+..|...+.+
T Consensus 124 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 203 (466)
T COG2319 124 SILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSS 203 (466)
T ss_pred eEEeccCCCCccEEEEEecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEE
Confidence 5555444 89999999885 777888999999999999999998888885 999999999998889999989999999
Q ss_pred EEecCCCE-EEEE-eCCCeEEEEEcCCCcceE-EEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCee-EEEecc
Q 010754 363 VDWRNNVS-FATS-STDNMIYVCKIGENRPIK-TFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY-VHDLRE 438 (502)
Q Consensus 363 v~~~~~~~-~~~~-~~d~~i~i~d~~~~~~~~-~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~-~~~~~~ 438 (502)
+.|.+... ++++ +.|+.|++||...+..+. .+.+|.... ...|+|++.++++++.|+.+++|+...... +..+..
T Consensus 204 ~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 282 (466)
T COG2319 204 LAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSG 282 (466)
T ss_pred EEEcCCcceEEEEecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEec
Confidence 99997764 4444 899999999998777777 688888775 448999999999999999999999987664 444467
Q ss_pred CCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 439 HSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 439 h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
|...|.++.|+|++. .++.++.++.+.+|..
T Consensus 283 ~~~~v~~~~~~~~~~-------~~~~~~~d~~~~~~~~ 313 (466)
T COG2319 283 HSSSVLSVAFSPDGK-------LLASGSSDGTVRLWDL 313 (466)
T ss_pred CCccEEEEEECCCCC-------EEEEeeCCCcEEEEEc
Confidence 889999999999776 5566666666888853
No 168
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.78 E-value=4.1e-19 Score=173.66 Aligned_cols=225 Identities=21% Similarity=0.400 Sum_probs=174.8
Q ss_pred eEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC
Q 010754 208 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~ 287 (502)
++.|.||...|+|+.|...|.++++|+.|..++||...+..+. ....+|.+.|+.++.+.+..
T Consensus 183 ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~l-----------------As~rGhs~ditdlavs~~n~ 245 (1113)
T KOG0644|consen 183 IKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCL-----------------ASCRGHSGDITDLAVSSNNT 245 (1113)
T ss_pred HHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhh-----------------ccCCCCccccchhccchhhh
Confidence 5678899999999999999999999999999999998876643 23356788999999999999
Q ss_pred EEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCc--------------eEEE
Q 010754 288 LLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE--------------WKQQ 352 (502)
Q Consensus 288 ~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~--------------~~~~ 352 (502)
++++++.|..|++|.+. +..+..+.+|++.|++++|+|.. +.+.||++++||.+-.- ....
T Consensus 246 ~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s 321 (1113)
T KOG0644|consen 246 MIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDS 321 (1113)
T ss_pred hhhhcccCceEEEEecCCCchHHHHhccccceeeeccCccc----cCCCCCceEeccccccccccCCCCCCcccccceee
Confidence 99999999999999976 56777889999999999999964 77899999999987110 0000
Q ss_pred Eee----------cc------CCeEEEEecCCCE------------EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEE
Q 010754 353 FEF----------HS------GPTLDVDWRNNVS------------FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCV 404 (502)
Q Consensus 353 ~~~----------~~------~~v~~v~~~~~~~------------~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l 404 (502)
+.+ .. -....+.|..... .+++-.+-.+.+|++.++..++.+.+|...+..+
T Consensus 322 ~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvL 401 (1113)
T KOG0644|consen 322 ILFENNGDRFLTGSRDGEARNHEFEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVL 401 (1113)
T ss_pred eeccccccccccccCCcccccchhhHhhhhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeee
Confidence 000 00 0011122222221 2333345667889999999999999999999999
Q ss_pred EEcCCCC-EEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCC
Q 010754 405 KWDPTGS-LLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 405 ~~sp~g~-~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
.++|-.. ...+++.||...|||+-.|.+++.+......+..-+||+||+
T Consensus 402 d~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~gh~kl~d~kFSqdgt 451 (1113)
T KOG0644|consen 402 DVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIGHGKLVDGKFSQDGT 451 (1113)
T ss_pred eecCCCcHhhhhccCCCceEeeecccCCcceeeecccceeeccccCCCCc
Confidence 9999655 456889999999999999988876653345677889999998
No 169
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.78 E-value=2.6e-17 Score=163.60 Aligned_cols=221 Identities=18% Similarity=0.233 Sum_probs=158.6
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCC---CcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEEC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGD---STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN 283 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~d---g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s 283 (502)
..+.+..|...|...+|+|+|+.|+.++.+ ..|++||+.++... .+.. .. .....++|+
T Consensus 195 ~~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~-----------~l~~----~~---g~~~~~~wS 256 (429)
T PRK01742 195 NQFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARK-----------VVAS----FR---GHNGAPAFS 256 (429)
T ss_pred CceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceE-----------EEec----CC---CccCceeEC
Confidence 356678888999999999999999988754 36999999876421 1111 11 123468999
Q ss_pred CCCCEEEEEE-CCCeEEEE--ECCCceEEEecCccCCeEEEEEecCCCEEEEEe-cCCeEEEEEcCCC-ceEEEEeeccC
Q 010754 284 GEGTLLATGS-YDGQARIW--STNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGS-CDKTAIVWDVKTE-EWKQQFEFHSG 358 (502)
Q Consensus 284 ~~g~~l~s~~-~dg~i~iw--d~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~-~d~~i~~wd~~~~-~~~~~~~~~~~ 358 (502)
|||+.|+.++ .+|.+.|| |+.+.....+..+...+....|+|+|+.|+.++ .++...||++... .....+ .+..
T Consensus 257 PDG~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~~~ 335 (429)
T PRK01742 257 PDGSRLAFASSKDGVLNIYVMGANGGTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-GGRG 335 (429)
T ss_pred CCCCEEEEEEecCCcEEEEEEECCCCCeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-cCCC
Confidence 9999888765 67866555 666666666777777888999999999877554 5788888876532 222222 2332
Q ss_pred CeEEEEecCCCE-EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEC--CCCeeEEE
Q 010754 359 PTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNM--KQDKYVHD 435 (502)
Q Consensus 359 ~v~~v~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~--~~~~~~~~ 435 (502)
....|+|++. ++..+.+ .+.+||+.++........+ ....+.|+|+|++|+.++.+|.+.+|.+ .+++.+..
T Consensus 336 --~~~~~SpDG~~ia~~~~~-~i~~~Dl~~g~~~~lt~~~--~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~ 410 (429)
T PRK01742 336 --YSAQISADGKTLVMINGD-NVVKQDLTSGSTEVLSSTF--LDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKAR 410 (429)
T ss_pred --CCccCCCCCCEEEEEcCC-CEEEEECCCCCeEEecCCC--CCCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEE
Confidence 4567887765 5555554 5666999888654332222 3356789999999999999998888875 46788888
Q ss_pred eccCCCcEEEEEEccC
Q 010754 436 LREHSKEIYTIRWSPT 451 (502)
Q Consensus 436 ~~~h~~~i~~v~~sp~ 451 (502)
+..|.+.+...+|||-
T Consensus 411 l~~~~g~~~~p~wsp~ 426 (429)
T PRK01742 411 LPGSDGQVKFPAWSPY 426 (429)
T ss_pred ccCCCCCCCCcccCCC
Confidence 9888888999999995
No 170
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=4.1e-18 Score=160.34 Aligned_cols=229 Identities=20% Similarity=0.241 Sum_probs=169.6
Q ss_pred CceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC
Q 010754 206 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 206 ~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~ 285 (502)
.++.++++|.++|.|++..+++..+++|+.||+|+.|++.... .+...+....+.....+|...|+.+++|+.
T Consensus 335 epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~-------dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~ 407 (577)
T KOG0642|consen 335 EPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQ-------DPDDSYDPSVLSGTLLGHTDAVWLLALSST 407 (577)
T ss_pred eeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCC-------CcccccCcchhccceeccccceeeeeeccc
Confidence 3578899999999999999999999999999999999987321 111222223456677889999999999999
Q ss_pred CCEEEEEECCCeEEEEECCCceEEEecCcc--CCeEEEEEecCC-CEEEEEecCCeEEEEEcCCCceEEEEeecc-----
Q 010754 286 GTLLATGSYDGQARIWSTNGDLKCTLSKHK--GPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQQFEFHS----- 357 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~v~~l~~~~~~-~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~----- 357 (502)
...|++++.||++++|.......+++.... +.-.++.+-... ...++...-+.-.++++.....+..+....
T Consensus 408 ~~~Llscs~DgTvr~w~~~~~~~~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~ 487 (577)
T KOG0642|consen 408 KDRLLSCSSDGTVRLWEPTEESPCTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPR 487 (577)
T ss_pred ccceeeecCCceEEeeccCCcCccccCCccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCccc
Confidence 999999999999999997655444443322 222444443222 223333333444445555554444443221
Q ss_pred --CCeEEEEecC-CCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEE
Q 010754 358 --GPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH 434 (502)
Q Consensus 358 --~~v~~v~~~~-~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~ 434 (502)
..+..+.+.+ ....+++..|+.|+++|..++.++.....|...++++++.|+|-+|++++.||.+++|.+....++.
T Consensus 488 ~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~ 567 (577)
T KOG0642|consen 488 RYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVL 567 (577)
T ss_pred ccCccceEEecCCCCeeEecccCCceecccccccccchheeeccceecceeecCCCceEEeecCCceeehhhccchheee
Confidence 2345556655 4567788899999999999999999999999999999999999999999999999999998888887
Q ss_pred EeccCCC
Q 010754 435 DLREHSK 441 (502)
Q Consensus 435 ~~~~h~~ 441 (502)
....|..
T Consensus 568 es~~~r~ 574 (577)
T KOG0642|consen 568 ESTAHRK 574 (577)
T ss_pred ccccccc
Confidence 7776653
No 171
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.76 E-value=1.1e-18 Score=160.45 Aligned_cols=229 Identities=14% Similarity=0.160 Sum_probs=196.0
Q ss_pred eEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCe
Q 010754 218 VCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQ 297 (502)
Q Consensus 218 V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~ 297 (502)
-+.+.++.+|.+|+.|+.-|.|..+|+.++.+...+.. ...|.++.|-.+.+++|++- ...
T Consensus 132 PY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v------------------~Etv~Dv~~LHneq~~AVAQ-K~y 192 (545)
T KOG1272|consen 132 PYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINV------------------METVRDVTFLHNEQFFAVAQ-KKY 192 (545)
T ss_pred CeeeeecCCccEEEecCCccceeeeecccceeeeeeeh------------------hhhhhhhhhhcchHHHHhhh-hce
Confidence 45789999999999999999999999998765322111 23588899988888888765 478
Q ss_pred EEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCE-EEEEeC
Q 010754 298 ARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS-FATSST 376 (502)
Q Consensus 298 i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~~~~ 376 (502)
++|||-.|..+..+..| ..|..+.|-|..-.|++++..|.++--|+.+|+.+..+....+.+..++-.|-+. +-+|..
T Consensus 193 ~yvYD~~GtElHClk~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~Ghs 271 (545)
T KOG1272|consen 193 VYVYDNNGTELHCLKRH-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHS 271 (545)
T ss_pred EEEecCCCcEEeehhhc-CchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCC
Confidence 99999999888888766 4689999999988888999999999999999999999988888888888877554 668889
Q ss_pred CCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCC
Q 010754 377 DNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTN 456 (502)
Q Consensus 377 d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~ 456 (502)
.|+|.+|......++..+-.|.++|.+|++.++|+|+||.+.|..++|||+++...++++.. ..+...+++|..|-
T Consensus 272 nGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t-p~~a~~ls~Sqkgl--- 347 (545)
T KOG1272|consen 272 NGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT-PHPASNLSLSQKGL--- 347 (545)
T ss_pred CceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeec-CCCccccccccccc---
Confidence 99999999999999988889999999999999999999999999999999999887777764 45688899999886
Q ss_pred CCCccEEEEeecCceEEEEe
Q 010754 457 NPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 457 ~~~~~l~las~~~~~~iw~~ 476 (502)
+.++....+.+|--
T Consensus 348 ------LA~~~G~~v~iw~d 361 (545)
T KOG1272|consen 348 ------LALSYGDHVQIWKD 361 (545)
T ss_pred ------eeeecCCeeeeehh
Confidence 77778888999953
No 172
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.76 E-value=1.1e-16 Score=158.08 Aligned_cols=245 Identities=21% Similarity=0.273 Sum_probs=178.7
Q ss_pred CCCceEEEEEcC-CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC--CEEE
Q 010754 214 HTSEVCACAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG--TLLA 290 (502)
Q Consensus 214 H~~~V~~~~~~p-~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g--~~l~ 290 (502)
-...|+|+.|+| +..+||.|+.+|.|.+||+..+.... ..........|..+++.+.|..+- .-++
T Consensus 241 ~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~-----------~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~ 309 (555)
T KOG1587|consen 241 SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTP-----------PSGLSALEVSHSEPVTAVVWLQNEHNTEFF 309 (555)
T ss_pred cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCC-----------CcccccccccCCcCeEEEEEeccCCCCceE
Confidence 347899999999 57899999999999999998765321 111223344678889999997654 4499
Q ss_pred EEECCCeEEEEECCCceE-------EEec------CccCCeEEEEEecCC-CEEEEEecCCeEEEEE---cCCCc-----
Q 010754 291 TGSYDGQARIWSTNGDLK-------CTLS------KHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWD---VKTEE----- 348 (502)
Q Consensus 291 s~~~dg~i~iwd~~~~~~-------~~~~------~~~~~v~~l~~~~~~-~~l~s~~~d~~i~~wd---~~~~~----- 348 (502)
+++.||.|..|+++.-.. .... .....+++++|.+.. ..|++|+.+|.|.-=+ .+...
T Consensus 310 s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~ 389 (555)
T KOG1587|consen 310 SLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYK 389 (555)
T ss_pred EEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCccccccccc
Confidence 999999999998653111 1111 223468999998844 6789999999988733 22221
Q ss_pred eEEEEeeccCCeEEEEecCCC-EEEEEeCCCeEEEEEcC-CCcceEEEecCCCcEEEEEEcCCC-CEEEEEeCCCcEEEE
Q 010754 349 WKQQFEFHSGPTLDVDWRNNV-SFATSSTDNMIYVCKIG-ENRPIKTFAGHQGEVNCVKWDPTG-SLLASCSDDVTAKIW 425 (502)
Q Consensus 349 ~~~~~~~~~~~v~~v~~~~~~-~~~~~~~d~~i~i~d~~-~~~~~~~~~~h~~~i~~l~~sp~g-~~las~s~dg~i~iw 425 (502)
....+..|.++|..+.++|-. .++..+.|.+++||... ...|+..+..+...|++++|||.. ..|+++..||.|.||
T Consensus 390 ~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iW 469 (555)
T KOG1587|consen 390 GHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIW 469 (555)
T ss_pred ccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehh
Confidence 233566788999999998733 33334449999999998 778888888888889999999975 467888889999999
Q ss_pred ECCC--CeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEeee
Q 010754 426 NMKQ--DKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICSI 478 (502)
Q Consensus 426 d~~~--~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~ 478 (502)
|+.. ..++.+.+.+....+.+.|++.|. +++.+|....++++.+
T Consensus 470 DLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~---------~lavGd~~G~~~~~~l 515 (555)
T KOG1587|consen 470 DLLQDDEEPVLSQKVCSPALTRVRWSPNGK---------LLAVGDANGTTHILKL 515 (555)
T ss_pred hhhccccCCcccccccccccceeecCCCCc---------EEEEecCCCcEEEEEc
Confidence 9864 345566665677788899999998 6666664444444333
No 173
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.76 E-value=3.5e-17 Score=154.92 Aligned_cols=278 Identities=21% Similarity=0.269 Sum_probs=198.3
Q ss_pred CCCcccccCCCCceeeeC---C-CceEEeccCCCceEEEEEcCCCC--eEEEEeCCCcEEEEecCCCCccC---------
Q 010754 187 PEPMDIATTSASESFEIP---N-SDVTILEGHTSEVCACAWSPAGS--LLASGSGDSTARIWTIADGTSNG--------- 251 (502)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~---~-~~~~~l~~H~~~V~~~~~~p~~~--~l~sgs~dg~v~iw~~~~~~~~~--------- 251 (502)
|....+++++.+++++++ . .+++++. -.+.|.|++|+|.+. +||++-... +-|-+-.-+..+.
T Consensus 410 p~G~wlasGsdDGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~~-~~ivnp~~G~~~e~~~t~ell~ 487 (733)
T KOG0650|consen 410 PSGEWLASGSDDGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGEC-VLIVNPIFGDRLEVGPTKELLA 487 (733)
T ss_pred CCcceeeecCCCCcEEEEEeecceEEEEEe-ecceeEEEEecCCCCceeEEEEecCc-eEEeCccccchhhhcchhhhhh
Confidence 344455666666644443 2 2333332 346899999999764 566555544 5555533221110
Q ss_pred CCCCCCc---eeEEEe-e----e---cCccccCCCCeEEEEECCCCCEEEEEECC---CeEEEEECCCce-EEEecCccC
Q 010754 252 GAQNGPL---NVLVLK-H----V---KGRTNEKSKDVTTLDWNGEGTLLATGSYD---GQARIWSTNGDL-KCTLSKHKG 316 (502)
Q Consensus 252 ~~~~~~~---~~~~~~-~----~---~~~~~~~~~~v~~l~~s~~g~~l~s~~~d---g~i~iwd~~~~~-~~~~~~~~~ 316 (502)
....... .+.... . . ......|...|..|.|+..|.||++...+ ..|.|+++.... ..-|....+
T Consensus 488 ~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF~kskG 567 (733)
T KOG0650|consen 488 SAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPFRKSKG 567 (733)
T ss_pred cCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEecccccccCchhhcCC
Confidence 0000000 000000 0 0 11233567889999999999999998765 478888876433 344556678
Q ss_pred CeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecC-CCEEEEEeCCCeEEEEEcCCC-cceEEE
Q 010754 317 PIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGEN-RPIKTF 394 (502)
Q Consensus 317 ~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~~~~d~~i~i~d~~~~-~~~~~~ 394 (502)
.|.++.|+|...+|++++ -..|++||+.....++.+......|..++.++ +..+++++.|+.+..||+.-+ ++.+++
T Consensus 568 ~vq~v~FHPs~p~lfVaT-q~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~l 646 (733)
T KOG0650|consen 568 LVQRVKFHPSKPYLFVAT-QRSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTL 646 (733)
T ss_pred ceeEEEecCCCceEEEEe-ccceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHh
Confidence 899999999998888876 46899999988777776666666788888876 456999999999999999754 688899
Q ss_pred ecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECC------CC---eeEEEeccCCCc----EEEEEEccCCCCCCCCCcc
Q 010754 395 AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK------QD---KYVHDLREHSKE----IYTIRWSPTGSGTNNPNQQ 461 (502)
Q Consensus 395 ~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~------~~---~~~~~~~~h~~~----i~~v~~sp~g~~~~~~~~~ 461 (502)
.-|...+++|+|++.-.++|+|+.||++.|+.-. .. -++..+++|... |..+.|||.-. +
T Consensus 647 r~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qp-------W 719 (733)
T KOG0650|consen 647 RLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQP-------W 719 (733)
T ss_pred hhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCc-------e
Confidence 9999999999999999999999999999998632 11 245778888765 99999999988 9
Q ss_pred EEEEeecCceEEE
Q 010754 462 LILARLIPYFLYW 474 (502)
Q Consensus 462 l~las~~~~~~iw 474 (502)
|++|++|+++++|
T Consensus 720 LfsAGAd~tirlf 732 (733)
T KOG0650|consen 720 LFSAGADGTIRLF 732 (733)
T ss_pred EEecCCCceEEee
Confidence 9999999999998
No 174
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.76 E-value=8.1e-17 Score=145.00 Aligned_cols=249 Identities=16% Similarity=0.216 Sum_probs=179.4
Q ss_pred EEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCE
Q 010754 209 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 288 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~ 288 (502)
+-+.+|.+.|.++.|+.++++|++|+.|..+++|++...-.... .+.+......|...|.|++|+...++
T Consensus 50 KD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~----------~KPI~~~~~~H~SNIF~L~F~~~N~~ 119 (609)
T KOG4227|consen 50 KDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKT----------PKPIGVMEHPHRSNIFSLEFDLENRF 119 (609)
T ss_pred hhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcC----------CCCceeccCccccceEEEEEccCCee
Confidence 45789999999999999999999999999999999875321100 01111122345678999999999999
Q ss_pred EEEEECCCeEEEEECCCceEEEecCcc---CCeEEEEEecCCCEEEEEecCCeEEEEEcCCCc-eEEE--EeeccCCeEE
Q 010754 289 LATGSYDGQARIWSTNGDLKCTLSKHK---GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE-WKQQ--FEFHSGPTLD 362 (502)
Q Consensus 289 l~s~~~dg~i~iwd~~~~~~~~~~~~~---~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~-~~~~--~~~~~~~v~~ 362 (502)
+++|..+++|.+.|++.+...-...|. +.|+.+..+|..+.|++.+.++.|.+||.+... .... ..........
T Consensus 120 ~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t 199 (609)
T KOG4227|consen 120 LYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYT 199 (609)
T ss_pred EecCCCcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCcccee
Confidence 999999999999999877665555554 499999999999999999999999999998665 2211 1223334566
Q ss_pred EEecCC--CEEEEEeCCCeEEEEEcCCCc-ce-----------------------------------------------E
Q 010754 363 VDWRNN--VSFATSSTDNMIYVCKIGENR-PI-----------------------------------------------K 392 (502)
Q Consensus 363 v~~~~~--~~~~~~~~d~~i~i~d~~~~~-~~-----------------------------------------------~ 392 (502)
+.|.|. ..+++.+..+.+.+||++... ++ .
T Consensus 200 ~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~ 279 (609)
T KOG4227|consen 200 AEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCF 279 (609)
T ss_pred eeecCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccce
Confidence 777664 457777788888888876421 00 0
Q ss_pred EEe-cCC-------CcEEEEEEcCCCCEEEEEeCCCcEEEEECCCC-----------------------eeEEEeccCCC
Q 010754 393 TFA-GHQ-------GEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD-----------------------KYVHDLREHSK 441 (502)
Q Consensus 393 ~~~-~h~-------~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~-----------------------~~~~~~~~h~~ 441 (502)
.|+ .|. ..+.+++|..+ .-+++|+++-.|+||.+... +.+..+++|.+
T Consensus 280 V~k~D~N~~GY~N~~T~KS~~F~~D-~~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRS 358 (609)
T KOG4227|consen 280 VLKSDHNPNGYCNIKTIKSMTFIDD-YTVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRS 358 (609)
T ss_pred eEeccCCCCcceeeeeeeeeeeecc-eeeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccc
Confidence 010 111 13445666543 34899999999999997421 23457789999
Q ss_pred cEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 442 EIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 442 ~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
-+..|.|+|... .|+..+....+++|.
T Consensus 359 v~NQVRF~~H~~-------~l~SSGVE~~~KlWS 385 (609)
T KOG4227|consen 359 VPNQVRFSQHNN-------LLVSSGVENSFKLWS 385 (609)
T ss_pred cccceeecCCcc-------eEeccchhhheeccc
Confidence 999999999987 444444457899995
No 175
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.76 E-value=2.3e-17 Score=154.10 Aligned_cols=193 Identities=19% Similarity=0.319 Sum_probs=155.6
Q ss_pred CeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCCce
Q 010754 228 SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDL 307 (502)
Q Consensus 228 ~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~ 307 (502)
..|+.++.||.+.|.+-... .......|.+.|.+-.|+|+|.-|++++.||.|++|...|.+
T Consensus 76 d~~~i~s~DGkf~il~k~~r------------------VE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGML 137 (737)
T KOG1524|consen 76 DTLLICSNDGRFVILNKSAR------------------VERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGML 137 (737)
T ss_pred ceEEEEcCCceEEEecccch------------------hhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccchH
Confidence 46788889999888763321 223345678899999999999999999999999999999988
Q ss_pred EEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecC-CCEEEEEeCCCeEEEEEcC
Q 010754 308 KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIG 386 (502)
Q Consensus 308 ~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~~~~d~~i~i~d~~ 386 (502)
..++.....+|+|++|.|+++.++-|. .+.+.+=.+.....+-....|.+-|.+++|++ ++.+++|+.|-..++||-
T Consensus 138 RStl~Q~~~~v~c~~W~p~S~~vl~c~-g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~- 215 (737)
T KOG1524|consen 138 RSTVVQNEESIRCARWAPNSNSIVFCQ-GGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDA- 215 (737)
T ss_pred HHHHhhcCceeEEEEECCCCCceEEec-CCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecc-
Confidence 888888889999999999987776653 45677766766666777889999999999976 566889999999999996
Q ss_pred CCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCC
Q 010754 387 ENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 387 ~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
.|.++..-..|..+|++++|.|+ ..++.+|.. ++|+ -+...+.|..++|||||.
T Consensus 216 ~G~~Lf~S~~~ey~ITSva~npd-~~~~v~S~n-t~R~-----------~~p~~GSifnlsWS~DGT 269 (737)
T KOG1524|consen 216 QGANLFTSAAEEYAITSVAFNPE-KDYLLWSYN-TARF-----------SSPRVGSIFNLSWSADGT 269 (737)
T ss_pred cCcccccCChhccceeeeeeccc-cceeeeeee-eeee-----------cCCCccceEEEEEcCCCc
Confidence 45667777789999999999999 667776654 4441 124567799999999999
No 176
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.76 E-value=9.4e-16 Score=137.60 Aligned_cols=229 Identities=16% Similarity=0.256 Sum_probs=165.6
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECC
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 295 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~d 295 (502)
..+..+.|+.+...|..|+.|| .++|........ .........|.-+-|+.. ++|..+.+
T Consensus 6 ~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~-----------------~~~~~~~~~IvEmLFSSS--LvaiV~~~ 65 (391)
T KOG2110|consen 6 PTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKC-----------------FSKDTEGVSIVEMLFSSS--LVAIVSIK 65 (391)
T ss_pred cceeeeeeccceeEEEccCCCc-eeEEecCchHHh-----------------hcccCCCeEEEEeecccc--eeEEEecC
Confidence 4567778999999999999988 577876653210 001111223555556644 66666554
Q ss_pred --CeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeec---cCCeEEEEecCCCE
Q 010754 296 --GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH---SGPTLDVDWRNNVS 370 (502)
Q Consensus 296 --g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~---~~~v~~v~~~~~~~ 370 (502)
..++++++..+...--.....+|.+++++. +.|+++-.+ .|+|||+++.+.++++... ...+.++..+..+.
T Consensus 66 qpr~Lkv~~~Kk~~~ICe~~fpt~IL~VrmNr--~RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ 142 (391)
T KOG2110|consen 66 QPRKLKVVHFKKKTTICEIFFPTSILAVRMNR--KRLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANC 142 (391)
T ss_pred CCceEEEEEcccCceEEEEecCCceEEEEEcc--ceEEEEEcc-cEEEEecccceeehhhhccCCCccceEeeccCCCCc
Confidence 458888876543333334567899999975 466666554 4999999999999888754 33355565555443
Q ss_pred -EEE--EeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCc-EEEEECCCCeeEEEeccC--CCcEE
Q 010754 371 -FAT--SSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVT-AKIWNMKQDKYVHDLREH--SKEIY 444 (502)
Q Consensus 371 -~~~--~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~-i~iwd~~~~~~~~~~~~h--~~~i~ 444 (502)
++. ....|.|++||..+-+++..+..|.+.+-+++|+++|.+|||+|+.|+ |||+.+.+|+.+..|+-. ...|+
T Consensus 143 ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~Iy 222 (391)
T KOG2110|consen 143 YLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIY 222 (391)
T ss_pred eEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEE
Confidence 433 235788999999999999999999999999999999999999999997 799999999999999833 34599
Q ss_pred EEEEccCCCCCCCCCccEEEEeec--CceEEEEe
Q 010754 445 TIRWSPTGSGTNNPNQQLILARLI--PYFLYWIC 476 (502)
Q Consensus 445 ~v~~sp~g~~~~~~~~~l~las~~--~~~~iw~~ 476 (502)
+++|+|+++ +++..+ +++.++-.
T Consensus 223 SL~Fs~ds~---------~L~~sS~TeTVHiFKL 247 (391)
T KOG2110|consen 223 SLSFSPDSQ---------FLAASSNTETVHIFKL 247 (391)
T ss_pred EEEECCCCC---------eEEEecCCCeEEEEEe
Confidence 999999998 444444 55555543
No 177
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.76 E-value=5.4e-16 Score=131.38 Aligned_cols=238 Identities=12% Similarity=0.136 Sum_probs=175.4
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECC
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 295 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~d 295 (502)
..|++-+|+|.+++|+.|+.+|.|.+..+.+-........+.. ......+|..+|+.++|. ..+|++|+ |
T Consensus 11 ~tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~-------~iv~eqahdgpiy~~~f~--d~~Lls~g-d 80 (325)
T KOG0649|consen 11 NTVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKL-------KIVPEQAHDGPIYYLAFH--DDFLLSGG-D 80 (325)
T ss_pred HHHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCc-------ceeeccccCCCeeeeeee--hhheeecc-C
Confidence 3467789999999999999999999999876432221111111 112236788999999998 34777776 5
Q ss_pred CeEEEEECCCce-------EE--EecCcc-----CCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeE
Q 010754 296 GQARIWSTNGDL-------KC--TLSKHK-----GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL 361 (502)
Q Consensus 296 g~i~iwd~~~~~-------~~--~~~~~~-----~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~ 361 (502)
|.|+-|..+... .. ....|. ..|++|-..|..+.+++++.|+.++.||+++|+..+.+++|.+-+.
T Consensus 81 G~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH 160 (325)
T KOG0649|consen 81 GLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVH 160 (325)
T ss_pred ceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceee
Confidence 999988743211 11 111122 3588999999888888888999999999999999999999999999
Q ss_pred EEEe-cCCCEEEEEeCCCeEEEEEcCCCcceEEEecC----------CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q 010754 362 DVDW-RNNVSFATSSTDNMIYVCKIGENRPIKTFAGH----------QGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD 430 (502)
Q Consensus 362 ~v~~-~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h----------~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~ 430 (502)
++.- ..+..+++|+.||++++||.++++.+..+... ...|-+++.+ ..+|+.|+. ..+.+|++++.
T Consensus 161 ~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~--edWlvCGgG-p~lslwhLrss 237 (325)
T KOG0649|consen 161 SVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVN--EDWLVCGGG-PKLSLWHLRSS 237 (325)
T ss_pred eeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEecc--CceEEecCC-CceeEEeccCC
Confidence 9988 56778999999999999999999988877532 1246666654 457766654 46999999999
Q ss_pred eeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 431 KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 431 ~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
++...+. -..++..+.|-.|- ++.++....+.-|.+
T Consensus 238 e~t~vfp-ipa~v~~v~F~~d~---------vl~~G~g~~v~~~~l 273 (325)
T KOG0649|consen 238 ESTCVFP-IPARVHLVDFVDDC---------VLIGGEGNHVQSYTL 273 (325)
T ss_pred CceEEEe-cccceeEeeeecce---------EEEeccccceeeeee
Confidence 8887775 44567888887763 355554666777643
No 178
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.75 E-value=2.7e-15 Score=149.17 Aligned_cols=247 Identities=29% Similarity=0.508 Sum_probs=191.3
Q ss_pred ceEEeccCCC-ceEEEEE-cCCCC-eEEEEeC-CCcEEEEecCC-CCccCCCCCCCceeEEEeeecCccccCCCCeEEEE
Q 010754 207 DVTILEGHTS-EVCACAW-SPAGS-LLASGSG-DSTARIWTIAD-GTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLD 281 (502)
Q Consensus 207 ~~~~l~~H~~-~V~~~~~-~p~~~-~l~sgs~-dg~v~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~ 281 (502)
.+..+.++.. .+..+.+ ++++. +++..+. |+.+.+|++.. .. .......|...|..++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----------------~~~~~~~~~~~v~~~~ 162 (466)
T COG2319 100 LIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGK-----------------LIRTLEGHSESVTSLA 162 (466)
T ss_pred eEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEEEecCCCe-----------------EEEEEecCcccEEEEE
Confidence 4556666443 7777777 88877 5555445 99999999886 22 1122234567799999
Q ss_pred ECCCCCEEEEEEC-CCeEEEEECCC-ceEEEecCccCCeEEEEEecCCC-EEEEEecCCeEEEEEcCCCceEE-EEeecc
Q 010754 282 WNGEGTLLATGSY-DGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEEWKQ-QFEFHS 357 (502)
Q Consensus 282 ~s~~g~~l~s~~~-dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~-~l~s~~~d~~i~~wd~~~~~~~~-~~~~~~ 357 (502)
|+|++..+++++. ++.+++|+... .....+..|...|.+++|+|++. .+++++.|+.|++||...+.... .+..|.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~ 242 (466)
T COG2319 163 FSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHS 242 (466)
T ss_pred ECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEeeecCCCC
Confidence 9999999998886 99999999874 67778888999999999999998 55555999999999999888877 577777
Q ss_pred CCeEEEEecCCC-EEEEEeCCCeEEEEEcCCCcc-eEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEE
Q 010754 358 GPTLDVDWRNNV-SFATSSTDNMIYVCKIGENRP-IKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD 435 (502)
Q Consensus 358 ~~v~~v~~~~~~-~~~~~~~d~~i~i~d~~~~~~-~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~ 435 (502)
... ...|.+.+ .+++++.|+.+++|++..... +..+.+|...|.++.|+|++..+++++.|+.+++|+..+......
T Consensus 243 ~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 321 (466)
T COG2319 243 DSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSS 321 (466)
T ss_pred cce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCceEEE
Confidence 765 33777765 788899999999999997765 555567889999999999999998899999999999998887766
Q ss_pred ec--cCCCcEEEEEEccCCCCCCCCCccEEEE-eecCceEEEEeee
Q 010754 436 LR--EHSKEIYTIRWSPTGSGTNNPNQQLILA-RLIPYFLYWICSI 478 (502)
Q Consensus 436 ~~--~h~~~i~~v~~sp~g~~~~~~~~~l~la-s~~~~~~iw~~~~ 478 (502)
.. .|...+..+.|.+++. .+..+ ..++.+.+|....
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~ 360 (466)
T COG2319 322 LTLKGHEGPVSSLSFSPDGS-------LLVSGGSDDGTIRLWDLRT 360 (466)
T ss_pred eeecccCCceEEEEECCCCC-------EEEEeecCCCcEEeeecCC
Confidence 65 7888899999943312 33444 4556677776443
No 179
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.74 E-value=3e-17 Score=144.78 Aligned_cols=207 Identities=22% Similarity=0.416 Sum_probs=157.4
Q ss_pred CceEEeccCCCceEEEEEcCC-CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC
Q 010754 206 SDVTILEGHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 284 (502)
Q Consensus 206 ~~~~~l~~H~~~V~~~~~~p~-~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~ 284 (502)
.....+.||...|..+.++|+ .+++++||.|.+||+|++++..++. ..+-..+|...|.++.|++
T Consensus 126 ~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~--------------VfGG~egHrdeVLSvD~~~ 191 (385)
T KOG1034|consen 126 QCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVA--------------VFGGVEGHRDEVLSVDFSL 191 (385)
T ss_pred hhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEE--------------EecccccccCcEEEEEEcC
Confidence 345678899999999999996 6899999999999999999987532 2344567788999999999
Q ss_pred CCCEEEEEECCCeEEEEECCCceE-----------------------------EEecCccCCeEEEEEecCCCEEEEEec
Q 010754 285 EGTLLATGSYDGQARIWSTNGDLK-----------------------------CTLSKHKGPIFSLKWNKKGDYLLTGSC 335 (502)
Q Consensus 285 ~g~~l~s~~~dg~i~iwd~~~~~~-----------------------------~~~~~~~~~v~~l~~~~~~~~l~s~~~ 335 (502)
+|.+|++|+.|..|++|++..+.. .+..-|...|-|+.|- |+++++=+-
T Consensus 192 ~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~--gd~ilSksc 269 (385)
T KOG1034|consen 192 DGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWF--GDFILSKSC 269 (385)
T ss_pred CCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHH--hhheeeccc
Confidence 999999999999999999762110 0222477778888886 689999999
Q ss_pred CCeEEEEEc-CCCc-------------eEEEEeeccCCeEEEEec--C-CCEEEEEeCCCeEEEEEcCCCcce--EEEec
Q 010754 336 DKTAIVWDV-KTEE-------------WKQQFEFHSGPTLDVDWR--N-NVSFATSSTDNMIYVCKIGENRPI--KTFAG 396 (502)
Q Consensus 336 d~~i~~wd~-~~~~-------------~~~~~~~~~~~v~~v~~~--~-~~~~~~~~~d~~i~i~d~~~~~~~--~~~~~ 396 (502)
++.|..|.. .-++ .+..+......+.-+.|. + ...++.|...|.|++||++...+. .++..
T Consensus 270 enaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~ 349 (385)
T KOG1034|consen 270 ENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKCTTLTH 349 (385)
T ss_pred CceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCccCceEEe
Confidence 999999976 2111 122233333344455553 2 345888999999999999988762 22321
Q ss_pred --CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 010754 397 --HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK 428 (502)
Q Consensus 397 --h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~ 428 (502)
....|...+|+.||.+|+..++|++|.-||..
T Consensus 350 s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 350 SKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV 383 (385)
T ss_pred ccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence 24579999999999999999999999999854
No 180
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.74 E-value=5.2e-16 Score=153.71 Aligned_cols=245 Identities=18% Similarity=0.209 Sum_probs=173.5
Q ss_pred cCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEE
Q 010754 213 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG 292 (502)
Q Consensus 213 ~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~ 292 (502)
.|+-.++|.++||+++++|+|..||.|.+|.--.... .... .....-|...|++++|+++|.+|++|
T Consensus 203 ~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~------~~~t-------~t~lHWH~~~V~~L~fS~~G~~LlSG 269 (792)
T KOG1963|consen 203 HHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSD------DSET-------CTLLHWHHDEVNSLSFSSDGAYLLSG 269 (792)
T ss_pred hhcccceeEEeccccceEEEeccCCcEEEEecccccc------cccc-------ceEEEecccccceeEEecCCceEeec
Confidence 4777799999999999999999999999997443110 0000 01112245689999999999999999
Q ss_pred ECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeecc-----------CCeE
Q 010754 293 SYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS-----------GPTL 361 (502)
Q Consensus 293 ~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~-----------~~v~ 361 (502)
+..|.+.+|.+.+....-+..-.++|..+.++|++.+.+....|+.|.+..+.+.....++.+.. +-.+
T Consensus 270 G~E~VLv~Wq~~T~~kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t 349 (792)
T KOG1963|consen 270 GREGVLVLWQLETGKKQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTT 349 (792)
T ss_pred ccceEEEEEeecCCCcccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccce
Confidence 99999999999877777888889999999999999999999999999999876554443333211 1233
Q ss_pred EEEecC-CCEEEEEeCCCeEEEEEcCCCcceEEE----------------------------------------------
Q 010754 362 DVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTF---------------------------------------------- 394 (502)
Q Consensus 362 ~v~~~~-~~~~~~~~~d~~i~i~d~~~~~~~~~~---------------------------------------------- 394 (502)
.++..| -+.++..+..|.|.+||+-+...+..+
T Consensus 350 ~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e 429 (792)
T KOG1963|consen 350 GVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGE 429 (792)
T ss_pred eEEEcCCCCceeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCce
Confidence 344444 333555555666666665443222111
Q ss_pred ----------------------ecCCCcEEEEEEc-CCCC-EEEEEeCCCcEEEEECCC----------CeeEEEeccCC
Q 010754 395 ----------------------AGHQGEVNCVKWD-PTGS-LLASCSDDVTAKIWNMKQ----------DKYVHDLREHS 440 (502)
Q Consensus 395 ----------------------~~h~~~i~~l~~s-p~g~-~las~s~dg~i~iwd~~~----------~~~~~~~~~h~ 440 (502)
..|...+...++. +... ..++++.||.++||-+.. ..|...-..|.
T Consensus 430 ~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k 509 (792)
T KOG1963|consen 430 VSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHK 509 (792)
T ss_pred EEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeecccc
Confidence 1354444444443 3333 788999999999998732 22333223478
Q ss_pred CcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEeee
Q 010754 441 KEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICSI 478 (502)
Q Consensus 441 ~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~ 478 (502)
.++++++|+.||+ ++..+.++.+.+|+..-
T Consensus 510 ~~i~a~~fs~dGs--------lla~s~~~~Itiwd~~~ 539 (792)
T KOG1963|consen 510 TPITALCFSQDGS--------LLAVSFDDTITIWDYDT 539 (792)
T ss_pred CcccchhhcCCCc--------EEEEecCCEEEEecCCC
Confidence 8999999999997 78889999999998543
No 181
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.74 E-value=1.5e-16 Score=137.99 Aligned_cols=208 Identities=19% Similarity=0.321 Sum_probs=160.1
Q ss_pred eEEec-cCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC--
Q 010754 208 VTILE-GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-- 284 (502)
Q Consensus 208 ~~~l~-~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~-- 284 (502)
+..|. .|-+.|.|+.|.|++..+++-. |..|.+|++..+..+.. .+ .......+....++-+|+|
T Consensus 115 v~~Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~va---------ev--~ss~s~e~~~~ftsg~WspHH 182 (370)
T KOG1007|consen 115 VASLDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVA---------EV--LSSESAEMRHSFTSGAWSPHH 182 (370)
T ss_pred hhcCCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchhe---------ee--cccccccccceecccccCCCC
Confidence 34444 5667999999999998888875 78999999988764210 00 1111222456688899998
Q ss_pred CCCEEEEEECCCeEEEEECCCc--eEEEecCccCCeEEEEEecCCC-EEEEEecCCeEEEEEcCC-CceEEEEeeccCCe
Q 010754 285 EGTLLATGSYDGQARIWSTNGD--LKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKT-EEWKQQFEFHSGPT 360 (502)
Q Consensus 285 ~g~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~v~~l~~~~~~~-~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~v 360 (502)
+|+.+++.+ |+++..||+++. ....-..|...|..+.|+|+.. +|++|+.||.|++||.+. ..+++.+..|...|
T Consensus 183 dgnqv~tt~-d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWv 261 (370)
T KOG1007|consen 183 DGNQVATTS-DSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWV 261 (370)
T ss_pred ccceEEEeC-CCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEE
Confidence 788887765 799999998753 2334467888999999999774 677999999999999975 45788889999999
Q ss_pred EEEEecC--CCEEEEEeCCCeEEEEEcCCC-----------------------------cceEEEecCCCcEEEEEEcCC
Q 010754 361 LDVDWRN--NVSFATSSTDNMIYVCKIGEN-----------------------------RPIKTFAGHQGEVNCVKWDPT 409 (502)
Q Consensus 361 ~~v~~~~--~~~~~~~~~d~~i~i~d~~~~-----------------------------~~~~~~~~h~~~i~~l~~sp~ 409 (502)
.++.|.+ +..+++++.|..|.+|-...- ..+.++..|.+.|.+++||.-
T Consensus 262 W~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsa 341 (370)
T KOG1007|consen 262 WAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSA 341 (370)
T ss_pred EEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccC
Confidence 9999976 567899999999999875421 124577889999999999975
Q ss_pred CC-EEEEEeCCCcEEEEECC
Q 010754 410 GS-LLASCSDDVTAKIWNMK 428 (502)
Q Consensus 410 g~-~las~s~dg~i~iwd~~ 428 (502)
.. .+|+-|.||.+.|=.+.
T Consensus 342 dPWiFASLSYDGRviIs~V~ 361 (370)
T KOG1007|consen 342 DPWIFASLSYDGRVIISSVP 361 (370)
T ss_pred CCeeEEEeccCceEEeecCC
Confidence 54 57889999999887765
No 182
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.74 E-value=5.6e-16 Score=136.46 Aligned_cols=229 Identities=20% Similarity=0.278 Sum_probs=177.9
Q ss_pred eccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEE
Q 010754 211 LEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA 290 (502)
Q Consensus 211 l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~ 290 (502)
+.--..+|+|.+|++|+..+|.+.....|.||.......- ........|...|++++|+|..+.|+
T Consensus 6 ~~~~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w--------------~~~htls~Hd~~vtgvdWap~snrIv 71 (361)
T KOG1523|consen 6 FHRLLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLW--------------EPAHTLSEHDKIVTGVDWAPKSNRIV 71 (361)
T ss_pred eeeccCceeeeeecCCCceEEeccCCceEEEEEecCCCCc--------------eeceehhhhCcceeEEeecCCCCcee
Confidence 3334588999999999999999999999999998765421 12234456788999999999999999
Q ss_pred EEECCCeEEEEEC-CC---ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCce----EEEEeeccCCeEE
Q 010754 291 TGSYDGQARIWST-NG---DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEW----KQQFEFHSGPTLD 362 (502)
Q Consensus 291 s~~~dg~i~iwd~-~~---~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~----~~~~~~~~~~v~~ 362 (502)
+|+.|..-++|.. .+ +....+..++...+++.|+|.++.|++|+..+.|.||-++...- .+.-..+...|.+
T Consensus 72 tcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~s 151 (361)
T KOG1523|consen 72 TCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTS 151 (361)
T ss_pred EccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceee
Confidence 9999999999997 43 33446677899999999999999999999999999997754321 1122345677999
Q ss_pred EEecCCCE-EEEEeCCCeEEEEEcCC------------------CcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q 010754 363 VDWRNNVS-FATSSTDNMIYVCKIGE------------------NRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAK 423 (502)
Q Consensus 363 v~~~~~~~-~~~~~~d~~i~i~d~~~------------------~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~ 423 (502)
++|++++. +++|+.|+..+++..-- |+.+..+....+.|..+.|+|+|..|+-.+.|.++.
T Consensus 152 ldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~ 231 (361)
T KOG1523|consen 152 LDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVS 231 (361)
T ss_pred eeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceE
Confidence 99988765 67888999999987421 122333434567899999999999999999999999
Q ss_pred EEECCCCe-eEEEeccCCCcEEEEEEccCCC
Q 010754 424 IWNMKQDK-YVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 424 iwd~~~~~-~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
+=|..... .+..+..-.-|..++.|-.+.+
T Consensus 232 ~~da~~p~~~v~~~~~~~lP~ls~~~ise~~ 262 (361)
T KOG1523|consen 232 FVDAAGPSERVQSVATAQLPLLSVSWISENS 262 (361)
T ss_pred EeecCCCchhccchhhccCCceeeEeecCCc
Confidence 99976654 3444443347888999987766
No 183
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.73 E-value=1.5e-16 Score=145.19 Aligned_cols=192 Identities=18% Similarity=0.221 Sum_probs=144.3
Q ss_pred EEEEECCCCCEEEEEECCCeEEEEE-CCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeec
Q 010754 278 TTLDWNGEGTLLATGSYDGQARIWS-TNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH 356 (502)
Q Consensus 278 ~~l~~s~~g~~l~s~~~dg~i~iwd-~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~ 356 (502)
.+++|+.+|..+++|+.||.+|||+ .+-........|...|.+|.|+|+|+.|++.+.| ..+||+++++..+......
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~ 226 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF 226 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence 7899999999999999999999999 5556667778899999999999999999999999 9999999999766655422
Q ss_pred --cCCeEEEEecCCC-----EEEE-EeCCCeEEEEEcCCCcc-----eEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q 010754 357 --SGPTLDVDWRNNV-----SFAT-SSTDNMIYVCKIGENRP-----IKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAK 423 (502)
Q Consensus 357 --~~~v~~v~~~~~~-----~~~~-~~~d~~i~i~d~~~~~~-----~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~ 423 (502)
......+.|..+. ++++ ....+.|+.|++....- ..+...-...|++++.+++|+++|.|+.||.|-
T Consensus 227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVa 306 (398)
T KOG0771|consen 227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVA 306 (398)
T ss_pred ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEE
Confidence 1224455554443 2332 23455666666543221 111222235799999999999999999999999
Q ss_pred EEECCCCeeEEEec-cCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 424 IWNMKQDKYVHDLR-EHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 424 iwd~~~~~~~~~~~-~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
|++..+.++++.++ .|..-|+.+.|+||.+ .+...+++....+-...
T Consensus 307 i~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr-------~~~svSs~~~~~v~~l~ 354 (398)
T KOG0771|consen 307 IYDAKSLQRLQYVKEAHLGFVTGLTFSPDSR-------YLASVSSDNEAAVTKLA 354 (398)
T ss_pred EEEeceeeeeEeehhhheeeeeeEEEcCCcC-------cccccccCCceeEEEEe
Confidence 99999988887776 8999999999999988 33444444444444333
No 184
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.73 E-value=8.4e-16 Score=133.52 Aligned_cols=244 Identities=22% Similarity=0.323 Sum_probs=178.6
Q ss_pred CceEEEEEcC--C-CCeEEEEeC----CCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC-
Q 010754 216 SEVCACAWSP--A-GSLLASGSG----DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT- 287 (502)
Q Consensus 216 ~~V~~~~~~p--~-~~~l~sgs~----dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~- 287 (502)
-.++++.|+. + +.+||.|+. ...|.|..+..... .........|..+++.+.|.|+..
T Consensus 45 ~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~--------------e~~~~a~fd~~YP~tK~~wiPd~~g 110 (364)
T KOG0290|consen 45 WPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSG--------------ELVEDANFDHPYPVTKLMWIPDSKG 110 (364)
T ss_pred CceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCC--------------ceeccCCCCCCCCccceEecCCccc
Confidence 4578899984 3 457888874 35666666553211 001112245677899999999763
Q ss_pred ----EEEEEECCCeEEEEECCC--ceE---E-----EecCccCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCCc---e
Q 010754 288 ----LLATGSYDGQARIWSTNG--DLK---C-----TLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEE---W 349 (502)
Q Consensus 288 ----~l~s~~~dg~i~iwd~~~--~~~---~-----~~~~~~~~v~~l~~~~-~~~~l~s~~~d~~i~~wd~~~~~---~ 349 (502)
+||+++ -.+|+|.+.. ... . .-..+..++++..|+. +-++|.+++-|-+..|||+.++. .
T Consensus 111 ~~pdlLATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~v 188 (364)
T KOG0290|consen 111 VYPDLLATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTV 188 (364)
T ss_pred cCcchhhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccce
Confidence 555544 5799998652 111 1 1234678999999997 55788899999999999998863 4
Q ss_pred EEEEeeccCCeEEEEecC--CCEEEEEeCCCeEEEEEcCCCcceEEEe---cCCCcEEEEEEcCC-CCEEEEEeCC-CcE
Q 010754 350 KQQFEFHSGPTLDVDWRN--NVSFATSSTDNMIYVCKIGENRPIKTFA---GHQGEVNCVKWDPT-GSLLASCSDD-VTA 422 (502)
Q Consensus 350 ~~~~~~~~~~v~~v~~~~--~~~~~~~~~d~~i~i~d~~~~~~~~~~~---~h~~~i~~l~~sp~-g~~las~s~d-g~i 422 (502)
..++-.|...|.+|+|.. .+.|++.+.||.+++||++.......+. ....+...++|++. -+++|+-..| ..|
T Consensus 189 kTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V 268 (364)
T KOG0290|consen 189 KTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKV 268 (364)
T ss_pred eeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceE
Confidence 667888999999999977 4569999999999999999876433332 12456888999885 4677876665 469
Q ss_pred EEEECCC-CeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEeeeEEE
Q 010754 423 KIWNMKQ-DKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICSIYFK 481 (502)
Q Consensus 423 ~iwd~~~-~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~~~~ 481 (502)
.|-|++. ..++..+++|.+.|+.|+|.|... ..+.+|+-|....+|+..-.+.
T Consensus 269 ~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~------~hictaGDD~qaliWDl~q~~~ 322 (364)
T KOG0290|consen 269 VILDIRVPCTPVARLRNHQASVNGIAWAPHSS------SHICTAGDDCQALIWDLQQMPR 322 (364)
T ss_pred EEEEecCCCcceehhhcCcccccceEecCCCC------ceeeecCCcceEEEEecccccc
Confidence 9999986 467889999999999999999876 4677777788899997654333
No 185
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.72 E-value=3.4e-16 Score=141.33 Aligned_cols=199 Identities=16% Similarity=0.308 Sum_probs=158.5
Q ss_pred ccccCCCCeEEEEECC-CCCEEEEEECCCeEEEEECC--------CceEEEecCccCCeEEEEEecCC-CEEEEEecCCe
Q 010754 269 RTNEKSKDVTTLDWNG-EGTLLATGSYDGQARIWSTN--------GDLKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKT 338 (502)
Q Consensus 269 ~~~~~~~~v~~l~~s~-~g~~l~s~~~dg~i~iwd~~--------~~~~~~~~~~~~~v~~l~~~~~~-~~l~s~~~d~~ 338 (502)
...+|..+|..++|+| +...||+|+.|.+|.||.+- ...+..+.+|...|-.+.|+|.. +.|++++.|.+
T Consensus 76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~ 155 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNT 155 (472)
T ss_pred CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCce
Confidence 3457899999999999 66789999999999999853 23467888999999999999965 68889999999
Q ss_pred EEEEEcCCCceEEEEeeccCCeEEEEecC-CCEEEEEeCCCeEEEEEcCCCcceEEEecCCC-cEEEEEEcCCCCEEEEE
Q 010754 339 AIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQG-EVNCVKWDPTGSLLASC 416 (502)
Q Consensus 339 i~~wd~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~-~i~~l~~sp~g~~las~ 416 (502)
|.+||+.+|..+.++. |...|.+++|+. +..+++.+.|..|+|||.++++.+..-.+|.+ .-..+.|-.+|.++-+|
T Consensus 156 v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tTG 234 (472)
T KOG0303|consen 156 VSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTTG 234 (472)
T ss_pred EEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCceeeec
Confidence 9999999999888887 999999999954 56689999999999999999999988888875 34456677888855554
Q ss_pred e---CCCcEEEEECCCCe---eEEEeccCCCcEEEEEEccCCCCCCCCCccE-EEEeecCceEEEEe
Q 010754 417 S---DDVTAKIWNMKQDK---YVHDLREHSKEIYTIRWSPTGSGTNNPNQQL-ILARLIPYFLYWIC 476 (502)
Q Consensus 417 s---~dg~i~iwd~~~~~---~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l-~las~~~~~~iw~~ 476 (502)
- .+..+-+||-.+-+ .+..+. .+..|.=--|.||.+ .+ +.|-+|+.|+.+-.
T Consensus 235 fsr~seRq~aLwdp~nl~eP~~~~elD-tSnGvl~PFyD~dt~-------ivYl~GKGD~~IRYyEi 293 (472)
T KOG0303|consen 235 FSRMSERQIALWDPNNLEEPIALQELD-TSNGVLLPFYDPDTS-------IVYLCGKGDSSIRYFEI 293 (472)
T ss_pred cccccccceeccCcccccCcceeEEec-cCCceEEeeecCCCC-------EEEEEecCCcceEEEEe
Confidence 3 36789999975533 234444 344566667888876 33 44566788888853
No 186
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.72 E-value=9.2e-15 Score=124.00 Aligned_cols=232 Identities=13% Similarity=0.175 Sum_probs=166.0
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
++...++|.++|+.++|+ ..+|++|+ ||.|+=|............ .....+.+.......-..|++|...|..
T Consensus 54 ~iv~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw~W~E~~es~~~K----~lwe~~~P~~~~~~evPeINam~ldP~e 126 (325)
T KOG0649|consen 54 KIVPEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGWEWNEEEESLATK----RLWEVKIPMQVDAVEVPEINAMWLDPSE 126 (325)
T ss_pred ceeeccccCCCeeeeeee--hhheeecc-CceEEEeeehhhhhhccch----hhhhhcCccccCcccCCccceeEeccCC
Confidence 345568999999999998 45677765 5999999887543210000 0000011111111223469999999988
Q ss_pred CEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccC-------
Q 010754 287 TLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSG------- 358 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~------- 358 (502)
+.++.++.|+.++-||++ ++....+.+|+..|.++.-......+++|+.||++++||.++++.++.+.....
T Consensus 127 nSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~ 206 (325)
T KOG0649|consen 127 NSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPD 206 (325)
T ss_pred CcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcc
Confidence 888888899999999987 677789999999999999866667899999999999999999999887764322
Q ss_pred ---CeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEE
Q 010754 359 ---PTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD 435 (502)
Q Consensus 359 ---~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~ 435 (502)
.|.+++ .+...++|+....+.+|.++...+..+|. -...+..+.|.. ..+++++..+.|.-|.+. |.+-..
T Consensus 207 ~g~wigala--~~edWlvCGgGp~lslwhLrsse~t~vfp-ipa~v~~v~F~~--d~vl~~G~g~~v~~~~l~-Gvl~a~ 280 (325)
T KOG0649|consen 207 WGKWIGALA--VNEDWLVCGGGPKLSLWHLRSSESTCVFP-IPARVHLVDFVD--DCVLIGGEGNHVQSYTLN-GVLQAN 280 (325)
T ss_pred cCceeEEEe--ccCceEEecCCCceeEEeccCCCceEEEe-cccceeEeeeec--ceEEEeccccceeeeeec-cEEEEe
Confidence 133333 23345667777889999999999988887 456788888864 467788888889999865 444445
Q ss_pred eccCCCcEEEEEEccC
Q 010754 436 LREHSKEIYTIRWSPT 451 (502)
Q Consensus 436 ~~~h~~~i~~v~~sp~ 451 (502)
+...+..+++..|+..
T Consensus 281 ip~~s~~c~s~s~~~~ 296 (325)
T KOG0649|consen 281 IPVESTACYSASWQTS 296 (325)
T ss_pred ccCCccceeeecccCC
Confidence 5545556777777654
No 187
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.70 E-value=7.6e-16 Score=135.63 Aligned_cols=179 Identities=23% Similarity=0.403 Sum_probs=146.7
Q ss_pred CCeEEEEECCCCCEEEEEECCCeEEEEECCCc----eEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCce
Q 010754 275 KDVTTLDWNGEGTLLATGSYDGQARIWSTNGD----LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDV-KTEEW 349 (502)
Q Consensus 275 ~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~-~~~~~ 349 (502)
.+|+|.+|++|+..+|++..+..|.||...+. ...++..|...|++++|+|..+.|++|+.|+.-++|.. ..+++
T Consensus 11 ~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~W 90 (361)
T KOG1523|consen 11 EPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTW 90 (361)
T ss_pred CceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCee
Confidence 57999999999999999999999999997653 46688899999999999999999999999999999998 44444
Q ss_pred E--EEEeeccCCeEEEEecC-CCEEEEEeCCCeEEEEEcCCCcce----EEEecCCCcEEEEEEcCCCCEEEEEeCCCcE
Q 010754 350 K--QQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPI----KTFAGHQGEVNCVKWDPTGSLLASCSDDVTA 422 (502)
Q Consensus 350 ~--~~~~~~~~~v~~v~~~~-~~~~~~~~~d~~i~i~d~~~~~~~----~~~~~h~~~i~~l~~sp~g~~las~s~dg~i 422 (502)
. ..+..+....++|.|+| .+.|++|+....|.||-+....-= ..-+.+.+.|+++.|+|++-+|++||.|+..
T Consensus 91 kptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~ 170 (361)
T KOG1523|consen 91 KPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKC 170 (361)
T ss_pred ccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccCcce
Confidence 3 34455788999999977 567999999999999987654321 1223456889999999999999999999999
Q ss_pred EEEECC------------------CCeeEEEeccCCCcEEEEEEccCCC
Q 010754 423 KIWNMK------------------QDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 423 ~iwd~~------------------~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
||+..- -|.++..+....+.|..+.|+|+|.
T Consensus 171 rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~ 219 (361)
T KOG1523|consen 171 RVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGN 219 (361)
T ss_pred eEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCC
Confidence 999741 1233444545567899999999998
No 188
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.69 E-value=6.4e-16 Score=136.16 Aligned_cols=193 Identities=20% Similarity=0.337 Sum_probs=147.4
Q ss_pred eEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC-CCEEEEEECCC
Q 010754 218 VCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE-GTLLATGSYDG 296 (502)
Q Consensus 218 V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~-g~~l~s~~~dg 296 (502)
..+++|+|||..|++|-. ..|+++|+........ + ...+.....+..+-|.+++|+|. ...+++|++..
T Consensus 161 AhsL~Fs~DGeqlfaGyk-rcirvFdt~RpGr~c~-------v--y~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q 230 (406)
T KOG2919|consen 161 AHSLQFSPDGEQLFAGYK-RCIRVFDTSRPGRDCP-------V--YTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQ 230 (406)
T ss_pred heeEEecCCCCeEeeccc-ceEEEeeccCCCCCCc-------c--hhhhhcccccccceeeeeeccCCCCcceeeecccc
Confidence 468999999999998854 8999999854321110 0 01111112234567999999994 45999999999
Q ss_pred eEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEec-CCeEEEEEcCCC-ceEEEEeeccC-CeEEEEe---cCCC
Q 010754 297 QARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSC-DKTAIVWDVKTE-EWKQQFEFHSG-PTLDVDW---RNNV 369 (502)
Q Consensus 297 ~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~-d~~i~~wd~~~~-~~~~~~~~~~~-~v~~v~~---~~~~ 369 (502)
.+-||.-. ...+..+.+|.+.|+.++|.++|+.|++|+. |-.|..||++.. .++..+..|.+ .-..|-| ..+.
T Consensus 231 ~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~ 310 (406)
T KOG2919|consen 231 RVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGE 310 (406)
T ss_pred eeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCc
Confidence 99888755 4677788899999999999999999999886 778999999754 34555555554 3344555 3355
Q ss_pred EEEEEeCCCeEEEEEcCC-CcceEEEecCCCcEEEEEEcCCCCEEEEEeCCC
Q 010754 370 SFATSSTDNMIYVCKIGE-NRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDV 420 (502)
Q Consensus 370 ~~~~~~~d~~i~i~d~~~-~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg 420 (502)
.+++|+.||.|++||+.. +..+..+..|...++.++++|--.++|+++...
T Consensus 311 ~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~mpilatssGqr 362 (406)
T KOG2919|consen 311 ILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIMPILATSSGQR 362 (406)
T ss_pred eeeccCCCccEEEEecCCCCCcccccccccccccceecCcccceeeeccCce
Confidence 678888999999999998 677888888999999999999999999988764
No 189
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.69 E-value=1.5e-15 Score=134.93 Aligned_cols=184 Identities=17% Similarity=0.355 Sum_probs=143.3
Q ss_pred CEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEec--CCCEEEEEecCCeEEEEEcCCCceEEEEee--cc-CCe
Q 010754 287 TLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNK--KGDYLLTGSCDKTAIVWDVKTEEWKQQFEF--HS-GPT 360 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~--~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~--~~-~~v 360 (502)
..+|++..+|.|++||.. ++....+.++...+..++|.. ....+.+|+.||+|++||+|+......+.. +. .+.
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f 120 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF 120 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence 568888899999999965 577788999999999999987 457899999999999999998765554433 33 244
Q ss_pred EEEEec-CCCEEEEEe----CCCeEEEEEcCCCcc-eEEE-ecCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEECCCCe-
Q 010754 361 LDVDWR-NNVSFATSS----TDNMIYVCKIGENRP-IKTF-AGHQGEVNCVKWDPT-GSLLASCSDDVTAKIWNMKQDK- 431 (502)
Q Consensus 361 ~~v~~~-~~~~~~~~~----~d~~i~i~d~~~~~~-~~~~-~~h~~~i~~l~~sp~-g~~las~s~dg~i~iwd~~~~~- 431 (502)
.+++-. ..+.+++|. .+-.+.+||++..+. +..+ ..|...|++++|+|. .++|+|||.||-|.|+|++...
T Consensus 121 ~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~E 200 (376)
T KOG1188|consen 121 ICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNE 200 (376)
T ss_pred eEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcc
Confidence 455544 344455553 356799999998876 5544 579999999999995 5789999999999999997643
Q ss_pred ---eEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 432 ---YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 432 ---~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
+++.+ .|.+.|..+.|+.++. ++++.-+-..+..+|.+.
T Consensus 201 eDaL~~vi-N~~sSI~~igw~~~~y------krI~clTH~Etf~~~ele 242 (376)
T KOG1188|consen 201 EDALLHVI-NHGSSIHLIGWLSKKY------KRIMCLTHMETFAIYELE 242 (376)
T ss_pred hhhHHHhh-cccceeeeeeeecCCc------ceEEEEEccCceeEEEcc
Confidence 23333 4778899999999985 458888888999999653
No 190
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.68 E-value=2.5e-15 Score=144.10 Aligned_cols=244 Identities=17% Similarity=0.254 Sum_probs=175.3
Q ss_pred ceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCC
Q 010754 217 EVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDG 296 (502)
Q Consensus 217 ~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg 296 (502)
.|..++|-|||..|+.+.. ..+.+||..++.... ...+|...|.|++|+.||+.+++|+.|.
T Consensus 14 ci~d~afkPDGsqL~lAAg-~rlliyD~ndG~llq-----------------tLKgHKDtVycVAys~dGkrFASG~aDK 75 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAAG-SRLLVYDTSDGTLLQ-----------------PLKGHKDTVYCVAYAKDGKRFASGSADK 75 (1081)
T ss_pred chheeEECCCCceEEEecC-CEEEEEeCCCccccc-----------------ccccccceEEEEEEccCCceeccCCCce
Confidence 7999999999998877755 579999999887433 3345678899999999999999999999
Q ss_pred eEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCC-CEEEEEe
Q 010754 297 QARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN-VSFATSS 375 (502)
Q Consensus 297 ~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~-~~~~~~~ 375 (502)
.|.+|+..-.-... ..|...|.|+.|+|-...|++|+.. ..-+|........+ . .....+.+++|..+ ..|+.|-
T Consensus 76 ~VI~W~~klEG~Lk-YSH~D~IQCMsFNP~~h~LasCsLs-dFglWS~~qK~V~K-~-kss~R~~~CsWtnDGqylalG~ 151 (1081)
T KOG1538|consen 76 SVIIWTSKLEGILK-YSHNDAIQCMSFNPITHQLASCSLS-DFGLWSPEQKSVSK-H-KSSSRIICCSWTNDGQYLALGM 151 (1081)
T ss_pred eEEEecccccceee-eccCCeeeEeecCchHHHhhhcchh-hccccChhhhhHHh-h-hhheeEEEeeecCCCcEEEEec
Confidence 99999854322222 3689999999999999999988764 46678765433221 1 13446888999665 4588899
Q ss_pred CCCeEEEEEcCCCcceEEE---ecCCCcEEEEEEcCCC-----CEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEE
Q 010754 376 TDNMIYVCKIGENRPIKTF---AGHQGEVNCVKWDPTG-----SLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIR 447 (502)
Q Consensus 376 ~d~~i~i~d~~~~~~~~~~---~~h~~~i~~l~~sp~g-----~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~ 447 (502)
.+|+|.+-+-. +.+...+ .|...+|.+|+|+|.. ..++......++.++.+. |+.+..-+.-.-.-.++.
T Consensus 152 ~nGTIsiRNk~-gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls-G~~Igk~r~L~FdP~Cis 229 (1081)
T KOG1538|consen 152 FNGTISIRNKN-GEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS-GKQIGKDRALNFDPCCIS 229 (1081)
T ss_pred cCceEEeecCC-CCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEec-ceeecccccCCCCchhhe
Confidence 99999887543 3332233 3467899999999963 357777777777777754 444432222222346788
Q ss_pred EccCCCCCCCCCccEEEEeecCceEE----------------EEeeeEEEeeecccccCc
Q 010754 448 WSPTGSGTNNPNQQLILARLIPYFLY----------------WICSIYFKYFGTTERANL 491 (502)
Q Consensus 448 ~sp~g~~~~~~~~~l~las~~~~~~i----------------w~~~~~~~~~g~~~~~~~ 491 (502)
+.|+|. ++++|++++.+.+ |+|.+...|.+++-..++
T Consensus 230 Yf~NGE-------y~LiGGsdk~L~~fTR~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GC 282 (1081)
T KOG1538|consen 230 YFTNGE-------YILLGGSDKQLSLFTRDGVRLGTVGEQDSWIWTVQAKPNSQYVVVGC 282 (1081)
T ss_pred eccCCc-------EEEEccCCCceEEEeecCeEEeeccccceeEEEEEEccCCceEEEEE
Confidence 888887 6777777765444 688888888887765544
No 191
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.68 E-value=7.4e-15 Score=145.31 Aligned_cols=197 Identities=19% Similarity=0.274 Sum_probs=145.5
Q ss_pred CCCeEEEEECC-CCCEEEEEECCCeEEEEECCCceE-------EEecCccCCeEEEEEecCC--CEEEEEecCCeEEEEE
Q 010754 274 SKDVTTLDWNG-EGTLLATGSYDGQARIWSTNGDLK-------CTLSKHKGPIFSLKWNKKG--DYLLTGSCDKTAIVWD 343 (502)
Q Consensus 274 ~~~v~~l~~s~-~g~~l~s~~~dg~i~iwd~~~~~~-------~~~~~~~~~v~~l~~~~~~--~~l~s~~~d~~i~~wd 343 (502)
...|+++.|+| +..+++.|+++|.|.+||++.... .....|..+|+.+.|..+- .-|++++.||.|..|+
T Consensus 242 ~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~ 321 (555)
T KOG1587|consen 242 PSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWD 321 (555)
T ss_pred CCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeeee
Confidence 45799999999 667888899999999999874322 2345689999999997654 4499999999999998
Q ss_pred cCCCceEE------EEe------eccCCeEEEEecC--CCEEEEEeCCCeEEEEEcCCCc--------ceEEEecCCCcE
Q 010754 344 VKTEEWKQ------QFE------FHSGPTLDVDWRN--NVSFATSSTDNMIYVCKIGENR--------PIKTFAGHQGEV 401 (502)
Q Consensus 344 ~~~~~~~~------~~~------~~~~~v~~v~~~~--~~~~~~~~~d~~i~i~d~~~~~--------~~~~~~~h~~~i 401 (502)
++.-.... ... .....++.+.|.+ ...|++|+..|.|+.......+ .+..+..|.++|
T Consensus 322 ~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v 401 (555)
T KOG1587|consen 322 TDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPV 401 (555)
T ss_pred ccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcce
Confidence 86543211 111 1233578888854 4669999999999885443322 234566788999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECC-CCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 402 NCVKWDPTGSLLASCSDDVTAKIWNMK-QDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 402 ~~l~~sp~g~~las~s~dg~i~iwd~~-~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
+++.++|=+..++..+.|.+++||... ...++..+..+...|++++|||... ..++++..+|.+.+|++
T Consensus 402 ~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrp------avF~~~d~~G~l~iWDL 471 (555)
T KOG1587|consen 402 YAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRP------AVFATVDGDGNLDIWDL 471 (555)
T ss_pred EeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCc------eEEEEEcCCCceehhhh
Confidence 999999987665555559999999988 6777777777888899999999987 22344444577777753
No 192
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.68 E-value=7.1e-16 Score=139.86 Aligned_cols=158 Identities=23% Similarity=0.419 Sum_probs=135.1
Q ss_pred CCCeEEEEECCCCC-EEEEEECCCeEEEEECC-----C-----ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEE
Q 010754 274 SKDVTTLDWNGEGT-LLATGSYDGQARIWSTN-----G-----DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVW 342 (502)
Q Consensus 274 ~~~v~~l~~s~~g~-~l~s~~~dg~i~iwd~~-----~-----~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~w 342 (502)
..+|.++.|.++.. .+++|+.|..|++|-++ + .....+..|...|+++.|+|+|..|++|+.+|.|.+|
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lW 92 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLW 92 (434)
T ss_pred CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEE
Confidence 35799999998766 99999999999999754 1 1234677899999999999999999999999999999
Q ss_pred EcC--------C--------CceEEEEeeccCCeEEEEecCCCE-EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEE
Q 010754 343 DVK--------T--------EEWKQQFEFHSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVK 405 (502)
Q Consensus 343 d~~--------~--------~~~~~~~~~~~~~v~~v~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~ 405 (502)
-.. + ....+.+.+|...+.+++|.+++. +++++.|+.+++||+..++.+..+..|...+..++
T Consensus 93 k~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgva 172 (434)
T KOG1009|consen 93 KQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVA 172 (434)
T ss_pred EecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeeccccccccceee
Confidence 654 2 223456677889999999988765 67889999999999999999999999999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEECCCCe
Q 010754 406 WDPTGSLLASCSDDVTAKIWNMKQDK 431 (502)
Q Consensus 406 ~sp~g~~las~s~dg~i~iwd~~~~~ 431 (502)
|.|-++++++-+.|...+++.+...+
T Consensus 173 wDpl~qyv~s~s~dr~~~~~~~~~~~ 198 (434)
T KOG1009|consen 173 WDPLNQYVASKSSDRHPEGFSAKLKQ 198 (434)
T ss_pred cchhhhhhhhhccCcccceeeeeeee
Confidence 99999999999999877777765443
No 193
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.68 E-value=8.2e-14 Score=134.26 Aligned_cols=238 Identities=12% Similarity=0.121 Sum_probs=155.5
Q ss_pred CCceEEEEEcCCCCeEEEEe-CCCcEEEEecCC-CCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEE
Q 010754 215 TSEVCACAWSPAGSLLASGS-GDSTARIWTIAD-GTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG 292 (502)
Q Consensus 215 ~~~V~~~~~~p~~~~l~sgs-~dg~v~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~ 292 (502)
.+....++++|++++|++++ .++.|.+|++.. +... ...... .......++|+|+|++|+++
T Consensus 34 ~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~-----------~~~~~~-----~~~~p~~i~~~~~g~~l~v~ 97 (330)
T PRK11028 34 PGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALT-----------FAAESP-----LPGSPTHISTDHQGRFLFSA 97 (330)
T ss_pred CCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceE-----------Eeeeec-----CCCCceEEEECCCCCEEEEE
Confidence 35577889999999887664 578899999863 2210 011110 12246789999999998888
Q ss_pred EC-CCeEEEEECCCc-----eEEEecCccCCeEEEEEecCCCEEEEEe-cCCeEEEEEcCCCceEEE-----Ee-eccCC
Q 010754 293 SY-DGQARIWSTNGD-----LKCTLSKHKGPIFSLKWNKKGDYLLTGS-CDKTAIVWDVKTEEWKQQ-----FE-FHSGP 359 (502)
Q Consensus 293 ~~-dg~i~iwd~~~~-----~~~~~~~~~~~v~~l~~~~~~~~l~s~~-~d~~i~~wd~~~~~~~~~-----~~-~~~~~ 359 (502)
+. ++.|.+|+++.. ....+ .+.....+++++|+++++++++ .++.|.+||+.+...+.. .. .....
T Consensus 98 ~~~~~~v~v~~~~~~g~~~~~~~~~-~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~ 176 (330)
T PRK11028 98 SYNANCVSVSPLDKDGIPVAPIQII-EGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAG 176 (330)
T ss_pred EcCCCeEEEEEECCCCCCCCceeec-cCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCC
Confidence 75 789999997621 12222 2334467789999999886655 569999999976332211 11 12234
Q ss_pred eEEEEecCCCE-EEEEe-CCCeEEEEEcCC--C--cceEEEecC------CCcEEEEEEcCCCCEEEEEeC-CCcEEEEE
Q 010754 360 TLDVDWRNNVS-FATSS-TDNMIYVCKIGE--N--RPIKTFAGH------QGEVNCVKWDPTGSLLASCSD-DVTAKIWN 426 (502)
Q Consensus 360 v~~v~~~~~~~-~~~~~-~d~~i~i~d~~~--~--~~~~~~~~h------~~~i~~l~~sp~g~~las~s~-dg~i~iwd 426 (502)
...+.|++++. ++++. .++.|.+|++.. + +.+..+..+ ......+.++|+|++|+++.. ++.|.+|+
T Consensus 177 p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~ 256 (330)
T PRK11028 177 PRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFS 256 (330)
T ss_pred CceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEE
Confidence 56788888755 43444 489999999974 2 223333321 122346899999999988854 78999999
Q ss_pred CCCCe----eEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEee-cCceEEEEee
Q 010754 427 MKQDK----YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARL-IPYFLYWICS 477 (502)
Q Consensus 427 ~~~~~----~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~-~~~~~iw~~~ 477 (502)
+.... .+..+.. ......++|+|+|. .++++.. ++.+.+|..+
T Consensus 257 i~~~~~~~~~~~~~~~-~~~p~~~~~~~dg~-------~l~va~~~~~~v~v~~~~ 304 (330)
T PRK11028 257 VSEDGSVLSFEGHQPT-ETQPRGFNIDHSGK-------YLIAAGQKSHHISVYEID 304 (330)
T ss_pred EeCCCCeEEEeEEEec-cccCCceEECCCCC-------EEEEEEccCCcEEEEEEc
Confidence 86533 2222222 12456889999998 6666664 6778888653
No 194
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.68 E-value=2.1e-14 Score=142.44 Aligned_cols=223 Identities=15% Similarity=0.188 Sum_probs=154.5
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEe---CCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEEC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGS---GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN 283 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs---~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s 283 (502)
..+.+..+...+...+|+|||+.|+..+ .+..+.+|++.+++... +. .. ...+..++|+
T Consensus 190 ~~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~-----------l~----~~---~~~~~~~~~S 251 (429)
T PRK03629 190 NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-----------VA----SF---PRHNGAPAFS 251 (429)
T ss_pred CCEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEE-----------cc----CC---CCCcCCeEEC
Confidence 3455666778899999999999888764 24578999987764210 00 01 1224568999
Q ss_pred CCCCEEEEE-ECCC--eEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecC-C--eEEEEEcCCCceEEEEeecc
Q 010754 284 GEGTLLATG-SYDG--QARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD-K--TAIVWDVKTEEWKQQFEFHS 357 (502)
Q Consensus 284 ~~g~~l~s~-~~dg--~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d-~--~i~~wd~~~~~~~~~~~~~~ 357 (502)
|||+.|+.. +.+| .|.+||+.+.....+..+...+....|+|+|+.|+.++.+ + .|+++|+.++... .+....
T Consensus 252 PDG~~La~~~~~~g~~~I~~~d~~tg~~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~-~lt~~~ 330 (429)
T PRK03629 252 PDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQ-RITWEG 330 (429)
T ss_pred CCCCEEEEEEcCCCCcEEEEEECCCCCEEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeE-EeecCC
Confidence 999988865 4444 5888998876666666666678899999999988876654 4 4555577666543 344344
Q ss_pred CCeEEEEecCCCE-EEEEeCC---CeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCc---EEEEECCCC
Q 010754 358 GPTLDVDWRNNVS-FATSSTD---NMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVT---AKIWNMKQD 430 (502)
Q Consensus 358 ~~v~~v~~~~~~~-~~~~~~d---~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~---i~iwd~~~~ 430 (502)
.......|+|++. ++..+.+ ..|++||+.++... .+... .......|+|||++|+.++.++. +.+|++ ++
T Consensus 331 ~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~-~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~-~G 407 (429)
T PRK03629 331 SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDT-FLDETPSIAPNGTMVIYSSSQGMGSVLNLVST-DG 407 (429)
T ss_pred CCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCCC-CCCCCceECCCCCEEEEEEcCCCceEEEEEEC-CC
Confidence 4556788888654 4444432 35888999877643 33321 23346789999999999988764 677777 46
Q ss_pred eeEEEeccCCCcEEEEEEccC
Q 010754 431 KYVHDLREHSKEIYTIRWSPT 451 (502)
Q Consensus 431 ~~~~~~~~h~~~i~~v~~sp~ 451 (502)
.....+.+|.+.+...+|+|-
T Consensus 408 ~~~~~l~~~~~~~~~p~Wsp~ 428 (429)
T PRK03629 408 RFKARLPATDGQVKFPAWSPY 428 (429)
T ss_pred CCeEECccCCCCcCCcccCCC
Confidence 666778888888999999983
No 195
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.67 E-value=2.3e-15 Score=133.73 Aligned_cols=248 Identities=14% Similarity=0.192 Sum_probs=175.4
Q ss_pred CceEEeccCCCceEEEEEcC--CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccC-CCCeEEEEE
Q 010754 206 SDVTILEGHTSEVCACAWSP--AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEK-SKDVTTLDW 282 (502)
Q Consensus 206 ~~~~~l~~H~~~V~~~~~~p--~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~l~~ 282 (502)
+.+..+++|...+..+.|.. .+..+.+|+.||+|++||+........+. ...+ ..+..+++.
T Consensus 61 ~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~---------------~~~~~~~~f~~ld~ 125 (376)
T KOG1188|consen 61 QLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARIS---------------WTQQSGTPFICLDL 125 (376)
T ss_pred hhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhhee---------------ccCCCCCcceEeec
Confidence 34677889999999999987 46789999999999999998765322111 1111 356788888
Q ss_pred CCCCCEEEEEEC----CCeEEEEECCCc---eEEEecCccCCeEEEEEecCC-CEEEEEecCCeEEEEEcCCCc---eEE
Q 010754 283 NGEGTLLATGSY----DGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEE---WKQ 351 (502)
Q Consensus 283 s~~g~~l~s~~~----dg~i~iwd~~~~---~~~~~~~~~~~v~~l~~~~~~-~~l~s~~~d~~i~~wd~~~~~---~~~ 351 (502)
+..++.+++|+. +-.|.+||++.. ...-...|...|++++|+|.. +.|++||.||-|.+||+.... .+.
T Consensus 126 nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~ 205 (376)
T KOG1188|consen 126 NCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALL 205 (376)
T ss_pred cCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHH
Confidence 888889998863 568999998743 233456799999999999955 789999999999999986442 222
Q ss_pred EEeeccCCeEEEEecCCC--EEEEEeCCCeEEEEEcCCCcceEEEecCC------------CcEEEEEEcCCCCEEEEEe
Q 010754 352 QFEFHSGPTLDVDWRNNV--SFATSSTDNMIYVCKIGENRPIKTFAGHQ------------GEVNCVKWDPTGSLLASCS 417 (502)
Q Consensus 352 ~~~~~~~~v~~v~~~~~~--~~~~~~~d~~i~i~d~~~~~~~~~~~~h~------------~~i~~l~~sp~g~~las~s 417 (502)
..-.+...|..+.|..+. ++.+-+......+|++..+.+...+.... ..+...-...++..++.++
T Consensus 206 ~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~~~~~~~~~~l~g 285 (376)
T KOG1188|consen 206 HVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEHSPGDKDTCALAG 285 (376)
T ss_pred HhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeecccCCCcceEEEec
Confidence 333467779999998776 78888999999999999887654443221 1121211122344555444
Q ss_pred C-CCcEEEEECC---C---CeeEEEecc-CCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 418 D-DVTAKIWNMK---Q---DKYVHDLRE-HSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 418 ~-dg~i~iwd~~---~---~~~~~~~~~-h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
. -|...++-+. + .+.+..+.+ |..-|+++.|.-.+. .+++++.|+.+++|-
T Consensus 286 ~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~-------~l~TGGEDG~l~~Wk 344 (376)
T KOG1188|consen 286 TDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKND-------VLYTGGEDGLLQAWK 344 (376)
T ss_pred cccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcccc-------eeeccCCCceEEEEe
Confidence 4 4555555432 2 334556665 666788898986665 788899999999996
No 196
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.65 E-value=1.4e-14 Score=145.76 Aligned_cols=247 Identities=15% Similarity=0.205 Sum_probs=168.9
Q ss_pred CceEEEEEcC--CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE
Q 010754 216 SEVCACAWSP--AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 293 (502)
Q Consensus 216 ~~V~~~~~~p--~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~ 293 (502)
..|+.+.+-. |..+|++|+.||.||||+-..... ..+.-+.....+.....+..+.-.-++|.....+|+++|
T Consensus 1110 t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~-----~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tG 1184 (1387)
T KOG1517|consen 1110 TRVSDLELINEQDDALLLTASSDGVIRIWKDYADKW-----KKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTG 1184 (1387)
T ss_pred CccceeeeecccchhheeeeccCceEEEeccccccc-----CCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecC
Confidence 5688888765 457999999999999998433211 000011122222222222222235567888766777777
Q ss_pred CCCeEEEEECCCceEEE--ecCccCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCCc---eEEEEeeccCC--eEEEEe
Q 010754 294 YDGQARIWSTNGDLKCT--LSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEE---WKQQFEFHSGP--TLDVDW 365 (502)
Q Consensus 294 ~dg~i~iwd~~~~~~~~--~~~~~~~v~~l~~~~-~~~~l~s~~~d~~i~~wd~~~~~---~~~~~~~~~~~--v~~v~~ 365 (502)
.-..|+|||.....+.. -.+....|+++.-+. .|+.+++|..||.|++||.+... .+...+.|... |..+.+
T Consensus 1185 d~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~sl 1264 (1387)
T KOG1517|consen 1185 DVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSL 1264 (1387)
T ss_pred CeeEEEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEe
Confidence 78999999987654432 223445667765443 56999999999999999997643 45566677776 999998
Q ss_pred cCC--CEEEEEeCCCeEEEEEcCCCcc--eEEEecCC---CcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEecc
Q 010754 366 RNN--VSFATSSTDNMIYVCKIGENRP--IKTFAGHQ---GEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE 438 (502)
Q Consensus 366 ~~~--~~~~~~~~d~~i~i~d~~~~~~--~~~~~~h~---~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~ 438 (502)
.++ +.+++|+.+|.|++||++.... ..++..|- +..+++..+++...+|+|+. +.|+||++. |+.+..++.
T Consensus 1265 q~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~-G~~l~~~k~ 1342 (1387)
T KOG1517|consen 1265 QRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLS-GEQLNIIKY 1342 (1387)
T ss_pred ecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecC-hhhhccccc
Confidence 653 4599999999999999998522 22233332 35999999999999999999 899999975 444444432
Q ss_pred C-------CCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 439 H-------SKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 439 h-------~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
+ .+.+.+++|||--- .+..|+.|..+.+|.+
T Consensus 1343 n~~F~~q~~gs~scL~FHP~~~-------llAaG~~Ds~V~iYs~ 1380 (1387)
T KOG1517|consen 1343 NPGFMGQRIGSVSCLAFHPHRL-------LLAAGSADSTVSIYSC 1380 (1387)
T ss_pred CcccccCcCCCcceeeecchhH-------hhhhccCCceEEEeec
Confidence 2 34589999999865 4555666677777654
No 197
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.65 E-value=2.6e-14 Score=143.88 Aligned_cols=241 Identities=17% Similarity=0.255 Sum_probs=175.5
Q ss_pred cCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC--CCCEEE
Q 010754 213 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG--EGTLLA 290 (502)
Q Consensus 213 ~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~--~g~~l~ 290 (502)
+....-..+.|+|-...++++...-.|+|||.+.++....+..+. .....|+.+.+-. |..+++
T Consensus 1062 ~n~~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~--------------~~~t~Vs~l~liNe~D~aLlL 1127 (1387)
T KOG1517|consen 1062 GNNQPPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGA--------------FPDTRVSDLELINEQDDALLL 1127 (1387)
T ss_pred cCCCCCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCC--------------CCCCccceeeeecccchhhee
Confidence 334456678899988889998877899999999988655444332 1235688888755 556899
Q ss_pred EEECCCeEEEEECC----C--ceEEEecC-------ccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeec-
Q 010754 291 TGSYDGQARIWSTN----G--DLKCTLSK-------HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH- 356 (502)
Q Consensus 291 s~~~dg~i~iwd~~----~--~~~~~~~~-------~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~- 356 (502)
+|+.||.|+||+-- + +.+....+ ..+.-.-+.|.....+|++++.-+.|+|||.....+...+...
T Consensus 1128 tas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s 1207 (1387)
T KOG1517|consen 1128 TASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGS 1207 (1387)
T ss_pred eeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCC
Confidence 99999999999721 1 22222221 1222255678887778888777899999999888777766543
Q ss_pred cCCeEEEEe--cCCCEEEEEeCCCeEEEEEcCCCc---ceEEEecCCCc--EEEEEEcCCCCE-EEEEeCCCcEEEEECC
Q 010754 357 SGPTLDVDW--RNNVSFATSSTDNMIYVCKIGENR---PIKTFAGHQGE--VNCVKWDPTGSL-LASCSDDVTAKIWNMK 428 (502)
Q Consensus 357 ~~~v~~v~~--~~~~~~~~~~~d~~i~i~d~~~~~---~~~~~~~h~~~--i~~l~~sp~g~~-las~s~dg~i~iwd~~ 428 (502)
...++++.- ..++.+++|..||.|++||.+... .+..++.|... |..+.+.+.|-- |++|+.||.|++||++
T Consensus 1208 ~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR 1287 (1387)
T KOG1517|consen 1208 STLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLR 1287 (1387)
T ss_pred CccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecc
Confidence 334555554 346789999999999999998653 57888889887 999999997755 9999999999999998
Q ss_pred CCeeE--EEeccCC--C-cEEEEEEccCCCCCCCCCccEEEEeec-CceEEEEe
Q 010754 429 QDKYV--HDLREHS--K-EIYTIRWSPTGSGTNNPNQQLILARLI-PYFLYWIC 476 (502)
Q Consensus 429 ~~~~~--~~~~~h~--~-~i~~v~~sp~g~~~~~~~~~l~las~~-~~~~iw~~ 476 (502)
..... ..+..|. + ..+++..|+... ++|+++ ..++||..
T Consensus 1288 ~~~~e~~~~iv~~~~yGs~lTal~VH~hap---------iiAsGs~q~ikIy~~ 1332 (1387)
T KOG1517|consen 1288 MSSKETFLTIVAHWEYGSALTALTVHEHAP---------IIASGSAQLIKIYSL 1332 (1387)
T ss_pred cCcccccceeeeccccCccceeeeeccCCC---------eeeecCcceEEEEec
Confidence 74322 2222333 3 589999999988 666655 77888863
No 198
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.65 E-value=1.4e-15 Score=142.69 Aligned_cols=210 Identities=17% Similarity=0.262 Sum_probs=153.8
Q ss_pred EEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC--CC
Q 010754 209 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG--EG 286 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~--~g 286 (502)
+.|.||++-|.|+.|+.+|.+|++||.|-.+.|||....+. +.....+|...|.++.|-| +.
T Consensus 44 ~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~Kl----------------lhsI~TgHtaNIFsvKFvP~tnn 107 (758)
T KOG1310|consen 44 AELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKL----------------LHSISTGHTANIFSVKFVPYTNN 107 (758)
T ss_pred hhhccccceecceeecCCCCEEeecCCcceEEeecchhcce----------------eeeeecccccceeEEeeeccCCC
Confidence 56899999999999999999999999999999999875443 2223356788999999998 56
Q ss_pred CEEEEEECCCeEEEEECCC-----------ceEEEecCccCCeEEEEEecCC-CEEEEEecCCeEEEEEcCCCce-EEE-
Q 010754 287 TLLATGSYDGQARIWSTNG-----------DLKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEW-KQQ- 352 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~~-----------~~~~~~~~~~~~v~~l~~~~~~-~~l~s~~~d~~i~~wd~~~~~~-~~~- 352 (502)
+++++|..|..|+++|++. .....+..|...|..|+-.|++ +.+.+++.||+|+-+|++.... ...
T Consensus 108 riv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~ 187 (758)
T KOG1310|consen 108 RIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDE 187 (758)
T ss_pred eEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccc
Confidence 7999999999999999862 1233456789999999999988 7899999999999999986321 111
Q ss_pred --------EeeccCCeEEEEe--cCCCEEEEEeCCCeEEEEEcCCCc------------------ceEEE-ecCC-----
Q 010754 353 --------FEFHSGPTLDVDW--RNNVSFATSSTDNMIYVCKIGENR------------------PIKTF-AGHQ----- 398 (502)
Q Consensus 353 --------~~~~~~~v~~v~~--~~~~~~~~~~~d~~i~i~d~~~~~------------------~~~~~-~~h~----- 398 (502)
+....-...++.. +....|++|+.|-..++||.+... ++..| .+|-
T Consensus 188 ~~~~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~g 267 (758)
T KOG1310|consen 188 DCPSILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQG 267 (758)
T ss_pred cccHHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCccc
Confidence 1111112233444 445679999999999999954210 12222 1222
Q ss_pred ---C---cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEE
Q 010754 399 ---G---EVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH 434 (502)
Q Consensus 399 ---~---~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~ 434 (502)
. .++-+.|+|+|.-|+..-..-.|+++|+..++...
T Consensus 268 n~~~~~~~~t~vtfnpNGtElLvs~~gEhVYlfdvn~~~~~~ 309 (758)
T KOG1310|consen 268 NLDRYITCCTYVTFNPNGTELLVSWGGEHVYLFDVNEDKSPT 309 (758)
T ss_pred ccccceeeeEEEEECCCCcEEEEeeCCeEEEEEeecCCCCce
Confidence 1 25668899999876665555579999998776543
No 199
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.64 E-value=7.2e-15 Score=126.11 Aligned_cols=219 Identities=21% Similarity=0.314 Sum_probs=156.7
Q ss_pred eEEec-cCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCC--------------CCCCCcee------------
Q 010754 208 VTILE-GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGG--------------AQNGPLNV------------ 260 (502)
Q Consensus 208 ~~~l~-~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~--------------~~~~~~~~------------ 260 (502)
+..++ .|...|+.+.--|+ ..|.+-+.|+.+.+|++.-+..+.. +...+.+.
T Consensus 48 ~~~~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~lw~ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsd 126 (323)
T KOG0322|consen 48 LPLIRLFGRLFITNLQSIPN-DSLDTQGRDPLLILWTIAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSD 126 (323)
T ss_pred chhhhhhccceeeceeecCC-cchhhcCCCceEEEEEccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccc
Confidence 44555 56778888888887 4577888999999999876322110 00000000
Q ss_pred ----------EEEeeecCccccCCCCeEEEEECC-CCC--EEEEEECCCeEEEEECCCc-----------eEEEecCccC
Q 010754 261 ----------LVLKHVKGRTNEKSKDVTTLDWNG-EGT--LLATGSYDGQARIWSTNGD-----------LKCTLSKHKG 316 (502)
Q Consensus 261 ----------~~~~~~~~~~~~~~~~v~~l~~s~-~g~--~l~s~~~dg~i~iwd~~~~-----------~~~~~~~~~~ 316 (502)
..............+.+.|..|.. ++. ++++|..+|.+.+||+... .......|..
T Consensus 127 e~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~q 206 (323)
T KOG0322|consen 127 ETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQ 206 (323)
T ss_pred hhhhhccCccceeEccCchhccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccC
Confidence 000011112223445677777644 222 5677888999999998752 3334557999
Q ss_pred CeEEEEEecCCCEEEEEecCCeEEEEEcCC--Cc--eEEEEeeccCCeEEEEecCCCE-EEEEeCCCeEEEEEcCCCcce
Q 010754 317 PIFSLKWNKKGDYLLTGSCDKTAIVWDVKT--EE--WKQQFEFHSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPI 391 (502)
Q Consensus 317 ~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~--~~--~~~~~~~~~~~v~~v~~~~~~~-~~~~~~d~~i~i~d~~~~~~~ 391 (502)
+|.++.|.+.-+.=++|+.+..+..|.+.- +. ...........+..+...++++ +++++.|++|+||..++..++
T Consensus 207 pvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pL 286 (323)
T KOG0322|consen 207 PVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPL 286 (323)
T ss_pred cceeeeechhhcCCcCCCccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCch
Confidence 999999988666667888888999998753 32 2223344455678888877655 789999999999999999999
Q ss_pred EEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 010754 392 KTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNM 427 (502)
Q Consensus 392 ~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~ 427 (502)
..++.|.+.|++++|+|+..++|++|.|+.|.+|++
T Consensus 287 AVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 287 AVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred hhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 999999999999999999999999999999999986
No 200
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.64 E-value=2e-14 Score=142.92 Aligned_cols=208 Identities=13% Similarity=0.103 Sum_probs=141.4
Q ss_pred CCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECC---CeEEEEECCCceEEEec
Q 010754 236 DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD---GQARIWSTNGDLKCTLS 312 (502)
Q Consensus 236 dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~d---g~i~iwd~~~~~~~~~~ 312 (502)
+..|.+||....... ....+...+.+.+|+|||+.|+.++.+ ..|++||+.+.....+.
T Consensus 183 ~~~i~i~d~dg~~~~------------------~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~ 244 (429)
T PRK01742 183 PYEVRVADYDGFNQF------------------IVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVA 244 (429)
T ss_pred eEEEEEECCCCCCce------------------EeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEe
Confidence 468999997654210 011234568999999999999988754 37999998765433333
Q ss_pred CccCCeEEEEEecCCCEEEEEe-cCCeEEE--EEcCCCceEEEEeeccCCeEEEEecCCCE-EEEE-eCCCeEEEEEcCC
Q 010754 313 KHKGPIFSLKWNKKGDYLLTGS-CDKTAIV--WDVKTEEWKQQFEFHSGPTLDVDWRNNVS-FATS-STDNMIYVCKIGE 387 (502)
Q Consensus 313 ~~~~~v~~l~~~~~~~~l~s~~-~d~~i~~--wd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~~-~~d~~i~i~d~~~ 387 (502)
...+....++|+|+|+.|+.++ .+|.+.| ||+.++.. ..+..+...+....|++++. ++.+ ..++...||++..
T Consensus 245 ~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~ 323 (429)
T PRK01742 245 SFRGHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTP-SQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSA 323 (429)
T ss_pred cCCCccCceeECCCCCEEEEEEecCCcEEEEEEECCCCCe-EeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEEC
Confidence 3334455789999999888764 6776555 46666654 44555666788899988765 4444 3567788887654
Q ss_pred Cc-ceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEe
Q 010754 388 NR-PIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILAR 466 (502)
Q Consensus 388 ~~-~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las 466 (502)
.. ....+ .+.. ..+.|+|+|++|+.++.++ +.+||+.+++.......+ ...++.|+|+|. .++.++
T Consensus 324 ~~~~~~~l-~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~--~~~~~~~sPdG~-------~i~~~s 390 (429)
T PRK01742 324 SGGGASLV-GGRG--YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSSTF--LDESPSISPNGI-------MIIYSS 390 (429)
T ss_pred CCCCeEEe-cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCCC--CCCCceECCCCC-------EEEEEE
Confidence 32 22333 3443 4578999999998888765 566999988764322222 345788999998 777777
Q ss_pred ecCceEEEE
Q 010754 467 LIPYFLYWI 475 (502)
Q Consensus 467 ~~~~~~iw~ 475 (502)
.++...+|.
T Consensus 391 ~~g~~~~l~ 399 (429)
T PRK01742 391 TQGLGKVLQ 399 (429)
T ss_pred cCCCceEEE
Confidence 778777764
No 201
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.64 E-value=3.8e-13 Score=118.78 Aligned_cols=230 Identities=16% Similarity=0.254 Sum_probs=154.9
Q ss_pred eEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEE-EEECC-
Q 010754 218 VCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA-TGSYD- 295 (502)
Q Consensus 218 V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~-s~~~d- 295 (502)
...++|+.|...++.|..+| .+||+++--+..... ......-.+.-|-|- .++|+ +|+.+
T Consensus 8 ~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~~r---------------~~~~~G~~~veMLfR--~N~laLVGGg~~ 69 (346)
T KOG2111|consen 8 TLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESASR---------------QFIDGGFKIVEMLFR--SNYLALVGGGSR 69 (346)
T ss_pred eeEEEEccCCceEEEEecCc-eEEEecCchhhhhhh---------------ccccCchhhhhHhhh--hceEEEecCCCC
Confidence 34589999999999987766 899998652211000 000000112222222 23433 34433
Q ss_pred -----CeEEEEEC-CCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCceEEEEeecc--CCeEEEEec
Q 010754 296 -----GQARIWST-NGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK-TEEWKQQFEFHS--GPTLDVDWR 366 (502)
Q Consensus 296 -----g~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~-~~~~~~~~~~~~--~~v~~v~~~ 366 (502)
..|.|||- ...++..+ ....+|.++++.++ .|++. ..+.|++|... ..+.++.+.... ....+++-.
T Consensus 70 pky~pNkviIWDD~k~~~i~el-~f~~~I~~V~l~r~--riVvv-l~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~ 145 (346)
T KOG2111|consen 70 PKYPPNKVIIWDDLKERCIIEL-SFNSEIKAVKLRRD--RIVVV-LENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPT 145 (346)
T ss_pred CCCCCceEEEEecccCcEEEEE-EeccceeeEEEcCC--eEEEE-ecCeEEEEEcCCChhheeeeecccCCCceEeecCC
Confidence 47999993 34444443 46789999999865 44443 57899999987 555666665433 234555544
Q ss_pred CCCEEE-EE-eCCCeEEEEEcCCCcc--eEEEecCCCcEEEEEEcCCCCEEEEEeCCCc-EEEEECCCCeeEEEecc--C
Q 010754 367 NNVSFA-TS-STDNMIYVCKIGENRP--IKTFAGHQGEVNCVKWDPTGSLLASCSDDVT-AKIWNMKQDKYVHDLRE--H 439 (502)
Q Consensus 367 ~~~~~~-~~-~~d~~i~i~d~~~~~~--~~~~~~h~~~i~~l~~sp~g~~las~s~dg~-i~iwd~~~~~~~~~~~~--h 439 (502)
.+..++ .. -.-|.|.|-|+...+. -..+.+|.+.|.|++++-+|.++||+|..|+ |||||..+|+.+.+++- .
T Consensus 146 ~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d 225 (346)
T KOG2111|consen 146 SNKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVD 225 (346)
T ss_pred CCceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCc
Confidence 444433 32 3468999999987765 4788899999999999999999999999998 79999999999999983 2
Q ss_pred CCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 440 SKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 440 ~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
...|++|+|||+++ +|..+|.-+++.++..
T Consensus 226 ~A~iy~iaFSp~~s-------~LavsSdKgTlHiF~l 255 (346)
T KOG2111|consen 226 RADIYCIAFSPNSS-------WLAVSSDKGTLHIFSL 255 (346)
T ss_pred hheEEEEEeCCCcc-------EEEEEcCCCeEEEEEe
Confidence 34699999999998 4444444466666643
No 202
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.64 E-value=3.7e-14 Score=145.01 Aligned_cols=270 Identities=17% Similarity=0.224 Sum_probs=185.2
Q ss_pred CCCceeeeCCCceEEeccCCCceEEEEEcCC-CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCC
Q 010754 196 SASESFEIPNSDVTILEGHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKS 274 (502)
Q Consensus 196 ~~~~~~~~~~~~~~~l~~H~~~V~~~~~~p~-~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (502)
.....|......+..|..|...|..++.++. +.+++|||.||+||+|++.+...... ..+ .........
T Consensus 1029 ~p~~gW~p~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~---------s~r-S~ltys~~~ 1098 (1431)
T KOG1240|consen 1029 SPPPGWNPRGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGG---------SAR-SELTYSPEG 1098 (1431)
T ss_pred CCCCCCCccceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcc---------eee-eeEEEeccC
Confidence 3344455556678999999999999999885 59999999999999999876432110 000 011111235
Q ss_pred CCeEEEEECCCCCEEEEEECCCeEEEEECCCc--------eEEEecCc-cCCeEEE-EEec-CCC-EEEEEecCCeEEEE
Q 010754 275 KDVTTLDWNGEGTLLATGSYDGQARIWSTNGD--------LKCTLSKH-KGPIFSL-KWNK-KGD-YLLTGSCDKTAIVW 342 (502)
Q Consensus 275 ~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~--------~~~~~~~~-~~~v~~l-~~~~-~~~-~l~s~~~d~~i~~w 342 (502)
..+.++.+.+.+..+|+++.||.|++.+++.. .......+ .+.+.++ +|.. .+. .++.+..-+.|..|
T Consensus 1099 sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~ 1178 (1431)
T KOG1240|consen 1099 SRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSW 1178 (1431)
T ss_pred CceEEEEeccCCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEe
Confidence 67999999999999999999999999987641 11111122 2233333 3332 223 67778888999999
Q ss_pred EcCCCceEEEE--eeccCCeEEEEecCCC-EEEEEeCCCeEEEEEcCCCcceEEEe-cCCCcEEEEEEcCCC---CEEEE
Q 010754 343 DVKTEEWKQQF--EFHSGPTLDVDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFA-GHQGEVNCVKWDPTG---SLLAS 415 (502)
Q Consensus 343 d~~~~~~~~~~--~~~~~~v~~v~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~-~h~~~i~~l~~sp~g---~~las 415 (502)
|+++.....++ ....+.|++++..+.. .+++|...|.+.+||++-+.++..+. .+..+|..+..+|-. ...++
T Consensus 1179 D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs 1258 (1431)
T KOG1240|consen 1179 DTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVS 1258 (1431)
T ss_pred cchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEE
Confidence 99887654443 3456779999987754 58899999999999999998887764 245678888887743 34444
Q ss_pred Ee--CCCcEEEEECCCCeeEEEeccCCCcEEEEEE-ccC-------CC-----CCCCCCccEEEEeecCceEEEEe
Q 010754 416 CS--DDVTAKIWNMKQDKYVHDLREHSKEIYTIRW-SPT-------GS-----GTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 416 ~s--~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~-sp~-------g~-----~~~~~~~~l~las~~~~~~iw~~ 476 (502)
++ ..+-|.+|++.+|.+-..+...+ .+..+.| .|. .- +...++..+++++.|+.++.|+.
T Consensus 1259 ~~~~~~nevs~wn~~~g~~~~vl~~s~-~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~ 1333 (1431)
T KOG1240|consen 1259 AGSSSNNEVSTWNMETGLRQTVLWASD-GAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDP 1333 (1431)
T ss_pred ecccCCCceeeeecccCcceEEEEcCC-CCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccC
Confidence 44 46789999999998777776441 1222222 121 11 34556778899999999999974
No 203
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.63 E-value=6.2e-14 Score=139.75 Aligned_cols=223 Identities=17% Similarity=0.177 Sum_probs=153.8
Q ss_pred CceEEeccCCCceEEEEEcCCCCeEEEEeCC---CcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEE
Q 010754 206 SDVTILEGHTSEVCACAWSPAGSLLASGSGD---STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW 282 (502)
Q Consensus 206 ~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~d---g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~ 282 (502)
...+.+..|...+.+.+|+|+|+.|+.++.+ ..|.+|++.++... . +. .......+.+|
T Consensus 194 ~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~-----------~---l~----~~~g~~~~~~~ 255 (433)
T PRK04922 194 YNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRE-----------L---VA----SFRGINGAPSF 255 (433)
T ss_pred CCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEE-----------E---ec----cCCCCccCceE
Confidence 3456677788889999999999999988743 46999999776421 0 10 01123457899
Q ss_pred CCCCCEEE-EEECCC--eEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEec-CCe--EEEEEcCCCceEEEEeec
Q 010754 283 NGEGTLLA-TGSYDG--QARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSC-DKT--AIVWDVKTEEWKQQFEFH 356 (502)
Q Consensus 283 s~~g~~l~-s~~~dg--~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~-d~~--i~~wd~~~~~~~~~~~~~ 356 (502)
+|+|+.|+ +.+.+| .|++||+.+.....+..+.......+|+|+|++|+.++. +|. |+++|+.+++... +...
T Consensus 256 SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~-lt~~ 334 (433)
T PRK04922 256 SPDGRRLALTLSRDGNPEIYVMDLGSRQLTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAER-LTFQ 334 (433)
T ss_pred CCCCCEEEEEEeCCCCceEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEE-eecC
Confidence 99999775 445555 699999887766667666666678999999998887664 444 7777777766433 3333
Q ss_pred cCCeEEEEecCCCE-EEEEeCCC---eEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCC---CcEEEEECCC
Q 010754 357 SGPTLDVDWRNNVS-FATSSTDN---MIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD---VTAKIWNMKQ 429 (502)
Q Consensus 357 ~~~v~~v~~~~~~~-~~~~~~d~---~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~d---g~i~iwd~~~ 429 (502)
........|++++. ++..+.++ .|.+||+.++... .+. +........|+|+|++|+..+.+ +.|.++++.
T Consensus 335 g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt-~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~- 411 (433)
T PRK04922 335 GNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLT-PGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTD- 411 (433)
T ss_pred CCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECC-CCCCCCCceECCCCCEEEEEEecCCceEEEEEECC-
Confidence 34455688987765 44433332 6999999887654 333 33345567999999988877653 458888875
Q ss_pred CeeEEEeccCCCcEEEEEEcc
Q 010754 430 DKYVHDLREHSKEIYTIRWSP 450 (502)
Q Consensus 430 ~~~~~~~~~h~~~i~~v~~sp 450 (502)
+.....+..+.+.+...+|+|
T Consensus 412 g~~~~~l~~~~g~~~~p~wsp 432 (433)
T PRK04922 412 GRVRQRLVSADGEVREPAWSP 432 (433)
T ss_pred CCceEEcccCCCCCCCCccCC
Confidence 445566666667788889988
No 204
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.63 E-value=1.1e-14 Score=139.01 Aligned_cols=183 Identities=20% Similarity=0.341 Sum_probs=140.8
Q ss_pred eCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC-CCCEEEEEECCCeEEEEECCC-------
Q 010754 234 SGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EGTLLATGSYDGQARIWSTNG------- 305 (502)
Q Consensus 234 s~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~-~g~~l~s~~~dg~i~iwd~~~------- 305 (502)
+.-|.|-||++.....+. .+-+ . .. .....|+.+.|.| |...|++++.||.|++|.+..
T Consensus 600 g~gG~iai~el~~PGrLP---Dgv~-----p---~l--~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~ 666 (1012)
T KOG1445|consen 600 GSGGVIAIYELNEPGRLP---DGVM-----P---GL--FNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENE 666 (1012)
T ss_pred CCCceEEEEEcCCCCCCC---cccc-----c---cc--ccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCccc
Confidence 445899999998643221 1110 0 11 1134699999999 778999999999999998642
Q ss_pred -ceEEEecCccCCeEEEEEecC-CCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCE-EEEEeCCCeEEE
Q 010754 306 -DLKCTLSKHKGPIFSLKWNKK-GDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS-FATSSTDNMIYV 382 (502)
Q Consensus 306 -~~~~~~~~~~~~v~~l~~~~~-~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~~~~d~~i~i 382 (502)
.....+..|...|+++.|+|- .+.|++++.|.+|++||+++++....+.+|.+.|.+++|+++++ +++.+.||+|++
T Consensus 667 ~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rV 746 (1012)
T KOG1445|consen 667 MTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRV 746 (1012)
T ss_pred CCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEE
Confidence 234567889999999999994 47889999999999999999999999999999999999988765 889999999999
Q ss_pred EEcCCCc-ceEEEecCC-CcEEEEEEcCCCCEEEEEeCCC----cEEEEECCC
Q 010754 383 CKIGENR-PIKTFAGHQ-GEVNCVKWDPTGSLLASCSDDV----TAKIWNMKQ 429 (502)
Q Consensus 383 ~d~~~~~-~~~~~~~h~-~~i~~l~~sp~g~~las~s~dg----~i~iwd~~~ 429 (502)
|..+++. ++..-.+.. ..--.|.|--+|++++..+.|. .|.+||..+
T Consensus 747 y~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~ 799 (1012)
T KOG1445|consen 747 YEPRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQT 799 (1012)
T ss_pred eCCCCCCCccccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhh
Confidence 9998764 444333322 2234577888999988877664 578888654
No 205
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.63 E-value=7.7e-15 Score=134.15 Aligned_cols=193 Identities=19% Similarity=0.225 Sum_probs=143.7
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeE
Q 010754 219 CACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQA 298 (502)
Q Consensus 219 ~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i 298 (502)
.+++|+++|..|++|+.||++|||++++...+ .....|...|.++.|+|||++|++-+.| ..
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~-----------------l~e~~~~~eV~DL~FS~dgk~lasig~d-~~ 209 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTI-----------------LEEIAHHAEVKDLDFSPDGKFLASIGAD-SA 209 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhh-----------------hhhHhhcCccccceeCCCCcEEEEecCC-ce
Confidence 68999999999999999999999998876532 2234567889999999999999999999 99
Q ss_pred EEEECCCce-EEEec--CccCCeEEEEEecCC---CEEEE--EecCCeEEEEEcCCCce-----EEEEeeccCCeEEEEe
Q 010754 299 RIWSTNGDL-KCTLS--KHKGPIFSLKWNKKG---DYLLT--GSCDKTAIVWDVKTEEW-----KQQFEFHSGPTLDVDW 365 (502)
Q Consensus 299 ~iwd~~~~~-~~~~~--~~~~~v~~l~~~~~~---~~l~s--~~~d~~i~~wd~~~~~~-----~~~~~~~~~~v~~v~~ 365 (502)
+||+++... +.... .-+.....+.|+.++ .+++. ...-+.|+.||+...+. ..+.......|.+++.
T Consensus 210 ~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~V 289 (398)
T KOG0771|consen 210 RVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAV 289 (398)
T ss_pred EEEEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEE
Confidence 999987542 22222 223346677787766 33333 33355677777643322 1111122346888998
Q ss_pred cCCCE-EEEEeCCCeEEEEEcCCCcceEEE-ecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 010754 366 RNNVS-FATSSTDNMIYVCKIGENRPIKTF-AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ 429 (502)
Q Consensus 366 ~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~-~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~ 429 (502)
++++. ++.|+.||.|.|++..+-+.++.. +.|...|+.+.|+|+.+++++.+.|..+.|..+.-
T Consensus 290 S~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 290 SDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV 355 (398)
T ss_pred cCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence 87766 678899999999999988776655 46888999999999999999999998888887643
No 206
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.61 E-value=1.7e-13 Score=136.16 Aligned_cols=223 Identities=15% Similarity=0.226 Sum_probs=149.5
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCC---CcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEEC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGD---STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN 283 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~d---g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s 283 (502)
..+.+..+...+.+.+|+|||+.|+..+.+ ..|.+||+.+++.. .+.. ....+.+.+|+
T Consensus 187 ~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~-----------~l~~-------~~g~~~~~~~S 248 (427)
T PRK02889 187 NAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRR-----------VVAN-------FKGSNSAPAWS 248 (427)
T ss_pred CceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEE-----------Eeec-------CCCCccceEEC
Confidence 345566788899999999999998887643 35999999876421 1110 12345688999
Q ss_pred CCCCEEE-EEECCCeEEEEE--CCCceEEEecCccCCeEEEEEecCCCEEEEEec-CCeEEEEEc--CCCceEEEEeecc
Q 010754 284 GEGTLLA-TGSYDGQARIWS--TNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSC-DKTAIVWDV--KTEEWKQQFEFHS 357 (502)
Q Consensus 284 ~~g~~l~-s~~~dg~i~iwd--~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~-d~~i~~wd~--~~~~~~~~~~~~~ 357 (502)
|||+.|+ +.+.+|...||. ..+.....+..+...+....|+|+|+.|+..+. ++...+|.+ .++... .+....
T Consensus 249 PDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~-~lt~~g 327 (427)
T PRK02889 249 PDGRTLAVALSRDGNSQIYTVNADGSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQ-RVTFTG 327 (427)
T ss_pred CCCCEEEEEEccCCCceEEEEECCCCCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceE-EEecCC
Confidence 9999887 456777766664 555555666666666678899999998886554 456666654 444432 232233
Q ss_pred CCeEEEEecCCCE-EEEEeCCC---eEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCC---cEEEEECCCC
Q 010754 358 GPTLDVDWRNNVS-FATSSTDN---MIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDV---TAKIWNMKQD 430 (502)
Q Consensus 358 ~~v~~v~~~~~~~-~~~~~~d~---~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg---~i~iwd~~~~ 430 (502)
.......|+|++. ++..+.++ .|++||+.++.... +.. ......+.|+|+|++|+.++.++ .+.+.++ ++
T Consensus 328 ~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~-lt~-~~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~-~g 404 (427)
T PRK02889 328 SYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTA-LTD-TTRDESPSFAPNGRYILYATQQGGRSVLAAVSS-DG 404 (427)
T ss_pred CCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEE-ccC-CCCccCceECCCCCEEEEEEecCCCEEEEEEEC-CC
Confidence 3344678887665 44444443 69999998876543 332 23346789999999988877654 3555566 45
Q ss_pred eeEEEeccCCCcEEEEEEccC
Q 010754 431 KYVHDLREHSKEIYTIRWSPT 451 (502)
Q Consensus 431 ~~~~~~~~h~~~i~~v~~sp~ 451 (502)
.....+..+.+.+...+|+|-
T Consensus 405 ~~~~~l~~~~g~~~~p~wsp~ 425 (427)
T PRK02889 405 RIKQRLSVQGGDVREPSWGPF 425 (427)
T ss_pred CceEEeecCCCCCCCCccCCC
Confidence 566666667777888999984
No 207
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.60 E-value=2.8e-13 Score=135.24 Aligned_cols=224 Identities=13% Similarity=0.145 Sum_probs=154.6
Q ss_pred CCceEEeccCCCceEEEEEcCCCCeEEEEeC---CCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEE
Q 010754 205 NSDVTILEGHTSEVCACAWSPAGSLLASGSG---DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLD 281 (502)
Q Consensus 205 ~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~---dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~ 281 (502)
....+.+..|...|.+.+|+|||+.|+..+. +..|.+|++.++... .+ ......+...+
T Consensus 191 g~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-----------~l-------~~~~g~~~~~~ 252 (435)
T PRK05137 191 GANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-----------LV-------GNFPGMTFAPR 252 (435)
T ss_pred CCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-----------Ee-------ecCCCcccCcE
Confidence 3455677788899999999999998888764 468999999876421 01 11233567889
Q ss_pred ECCCCCEEE-EEECCCe--EEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEec-CC--eEEEEEcCCCceEEEEee
Q 010754 282 WNGEGTLLA-TGSYDGQ--ARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSC-DK--TAIVWDVKTEEWKQQFEF 355 (502)
Q Consensus 282 ~s~~g~~l~-s~~~dg~--i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~-d~--~i~~wd~~~~~~~~~~~~ 355 (502)
|+|||+.|+ +.+.+|. |.+||+.+.....+..+........|+|+|+.|+..+. +| .|++||+.++... .+..
T Consensus 253 ~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~-~lt~ 331 (435)
T PRK05137 253 FSPDGRKVVMSLSQGGNTDIYTMDLRSGTTTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPR-RISF 331 (435)
T ss_pred ECCCCCEEEEEEecCCCceEEEEECCCCceEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeE-Eeec
Confidence 999999775 4555554 77778887777777777777788999999998887664 33 6888898766544 3443
Q ss_pred ccCCeEEEEecCCCE-EEEEeCC---CeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCC------CcEEEE
Q 010754 356 HSGPTLDVDWRNNVS-FATSSTD---NMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD------VTAKIW 425 (502)
Q Consensus 356 ~~~~v~~v~~~~~~~-~~~~~~d---~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~d------g~i~iw 425 (502)
....+....|+|++. ++....+ ..|.+||+..+.. ..+. ....+..+.|+|||++|+..+.+ ..|+++
T Consensus 332 ~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt-~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~ 409 (435)
T PRK05137 332 GGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILT-SGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTV 409 (435)
T ss_pred CCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-Eecc-CCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEE
Confidence 445566788988765 4444332 3688888765443 3333 23356788999999998765543 257888
Q ss_pred ECCCCeeEEEeccCCCcEEEEEEccC
Q 010754 426 NMKQDKYVHDLREHSKEIYTIRWSPT 451 (502)
Q Consensus 426 d~~~~~~~~~~~~h~~~i~~v~~sp~ 451 (502)
|+..+.. ..+. ..+.+...+|+|-
T Consensus 410 dl~g~~~-~~l~-~~~~~~~p~Wsp~ 433 (435)
T PRK05137 410 DLTGRNE-REVP-TPGDASDPAWSPL 433 (435)
T ss_pred ECCCCce-EEcc-CCCCccCcccCCC
Confidence 8766554 4444 3445778889874
No 208
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.59 E-value=1.4e-14 Score=134.41 Aligned_cols=262 Identities=17% Similarity=0.227 Sum_probs=188.8
Q ss_pred eEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCc-eeEEE-----------------------
Q 010754 208 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPL-NVLVL----------------------- 263 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~-~~~~~----------------------- 263 (502)
...|.+|.+.|..+.|+..|..|++||.|..|.+||+..++....+..+.. ++...
T Consensus 135 ~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s 214 (559)
T KOG1334|consen 135 QKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVS 214 (559)
T ss_pred hhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeee
Confidence 356889999999999999999999999999999999987655443322211 00000
Q ss_pred -----e--eecCccccCCCCeEEEEECCCC-CEEEEEECCCeEEEEECCCc----eEEEecCccC---CeEEEEEecCC-
Q 010754 264 -----K--HVKGRTNEKSKDVTTLDWNGEG-TLLATGSYDGQARIWSTNGD----LKCTLSKHKG---PIFSLKWNKKG- 327 (502)
Q Consensus 264 -----~--~~~~~~~~~~~~v~~l~~s~~g-~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~---~v~~l~~~~~~- 327 (502)
. .-......|.+.|..++.-|+. .-|.+++.|+.+.-+|++.. .......+.. ..+.++.+|..
T Consensus 215 ~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt 294 (559)
T KOG1334|consen 215 EILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNT 294 (559)
T ss_pred eeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCc
Confidence 0 0012334677888899988855 46889999999999987632 2222223333 56788889866
Q ss_pred CEEEEEecCCeEEEEEcCCCce------EEEEee------ccCCeEEEEec-CCCEEEEEeCCCeEEEEEcCC--C----
Q 010754 328 DYLLTGSCDKTAIVWDVKTEEW------KQQFEF------HSGPTLDVDWR-NNVSFATSSTDNMIYVCKIGE--N---- 388 (502)
Q Consensus 328 ~~l~s~~~d~~i~~wd~~~~~~------~~~~~~------~~~~v~~v~~~-~~~~~~~~~~d~~i~i~d~~~--~---- 388 (502)
..+++++.|-.+++||.+.-.. +..|.. ....|+++.|+ ....++++..|-.|+++.-.- +
T Consensus 295 ~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~ 374 (559)
T KOG1334|consen 295 NEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPD 374 (559)
T ss_pred cccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCCCCC
Confidence 4889999999999999865322 122221 23358999997 667788888999999995321 2
Q ss_pred ------cceEE-EecCCC--cEEEEE-EcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCC
Q 010754 389 ------RPIKT-FAGHQG--EVNCVK-WDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNP 458 (502)
Q Consensus 389 ------~~~~~-~~~h~~--~i~~l~-~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~ 458 (502)
..++. ++||.. .|.++- |-|...|+++||+=|.|.||+-.+++.+.-+.+...-|+||.=+|--+
T Consensus 375 ~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~P----- 449 (559)
T KOG1334|consen 375 PSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLP----- 449 (559)
T ss_pred CCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCc-----
Confidence 22333 788864 466665 568889999999999999999999999998888777899999999877
Q ss_pred CccEEEEeecCceEEEEe
Q 010754 459 NQQLILARLIPYFLYWIC 476 (502)
Q Consensus 459 ~~~l~las~~~~~~iw~~ 476 (502)
.|.+.+.+.+|+||-.
T Consensus 450 --vLAsSGid~DVKIWTP 465 (559)
T KOG1334|consen 450 --VLASSGIDHDVKIWTP 465 (559)
T ss_pred --hhhccCCccceeeecC
Confidence 3333344688999964
No 209
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.59 E-value=1.5e-12 Score=116.85 Aligned_cols=229 Identities=24% Similarity=0.403 Sum_probs=147.8
Q ss_pred CCceEEEEEcCC-CCeEEEEeCCCcEEEEecCCCCccCCC----CCCCceeEEEeeecCccccCCCCeEEEEECCCCCEE
Q 010754 215 TSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGA----QNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 289 (502)
Q Consensus 215 ~~~V~~~~~~p~-~~~l~sgs~dg~v~iw~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l 289 (502)
...|+|++|-|. ++-|+.|+. +-|.||........... ..++.. .....+ ...|++|.|++||..+
T Consensus 140 QrnvtclawRPlsaselavgCr-~gIciW~~s~tln~~r~~~~~s~~~~q-------vl~~pg-h~pVtsmqwn~dgt~l 210 (445)
T KOG2139|consen 140 QRNVTCLAWRPLSASELAVGCR-AGICIWSDSRTLNANRNIRMMSTHHLQ-------VLQDPG-HNPVTSMQWNEDGTIL 210 (445)
T ss_pred hcceeEEEeccCCcceeeeeec-ceeEEEEcCcccccccccccccccchh-------heeCCC-CceeeEEEEcCCCCEE
Confidence 467999999995 578888887 55999987643211110 111110 011122 3679999999999999
Q ss_pred EEEECC-CeEEEEECCCceEEEec-CccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecC
Q 010754 290 ATGSYD-GQARIWSTNGDLKCTLS-KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN 367 (502)
Q Consensus 290 ~s~~~d-g~i~iwd~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~ 367 (502)
++++.+ ..|.|||.+......+. ...+.+.-++|+|++.+|+++.-|+..++|...............+.|...+|+|
T Consensus 211 ~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw~lgsgrvqtacWsp 290 (445)
T KOG2139|consen 211 VTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKERWILGSGRVQTACWSP 290 (445)
T ss_pred eecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehhcccceecceeccCCceeeeeecC
Confidence 999865 78999999876555554 4557788999999999999999999999996544333333344556899999999
Q ss_pred CCEEEEEeCCCeEEEEEcC--CCcce-------------EEE------ec---CCCcEEEEEEcCCCCEEEEEeCCC---
Q 010754 368 NVSFATSSTDNMIYVCKIG--ENRPI-------------KTF------AG---HQGEVNCVKWDPTGSLLASCSDDV--- 420 (502)
Q Consensus 368 ~~~~~~~~~d~~i~i~d~~--~~~~~-------------~~~------~~---h~~~i~~l~~sp~g~~las~s~dg--- 420 (502)
.+.++.-...|.-++|.+. ....+ ..+ .+ -.+.+.+++|+|.|.+||+.-..+
T Consensus 291 cGsfLLf~~sgsp~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v 370 (445)
T KOG2139|consen 291 CGSFLLFACSGSPRLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFV 370 (445)
T ss_pred CCCEEEEEEcCCceEEEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchh
Confidence 8774433333333444432 11110 000 11 135788999999999999876543
Q ss_pred -----cEEEEECCCCeeEEEec-c--CCCcEEEEEEccCC
Q 010754 421 -----TAKIWNMKQDKYVHDLR-E--HSKEIYTIRWSPTG 452 (502)
Q Consensus 421 -----~i~iwd~~~~~~~~~~~-~--h~~~i~~v~~sp~g 452 (502)
.|.+||.+..-.+.-.. + ....-..|+|+|-.
T Consensus 371 ~~~k~~i~~fdtr~sp~vels~cg~i~ge~P~~IsF~pl~ 410 (445)
T KOG2139|consen 371 LLCKLHISRFDTRKSPPVELSYCGMIGGEYPAYISFGPLK 410 (445)
T ss_pred hhhhhhhhhhcccccCceEEEecccccCCCCceEEeeecc
Confidence 36778876544332221 1 11124567787754
No 210
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.58 E-value=3.6e-13 Score=120.77 Aligned_cols=218 Identities=22% Similarity=0.403 Sum_probs=150.3
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC-CCEEEEEEC
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE-GTLLATGSY 294 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~-g~~l~s~~~ 294 (502)
-.+..++|++.-..+|++..|-+|++|+-.... . ..+++ .....|+|++|-|. +..|++|+.
T Consensus 99 ~dlr~~aWhqH~~~fava~nddvVriy~ksst~-p----------t~Lks------~sQrnvtclawRPlsaselavgCr 161 (445)
T KOG2139|consen 99 IDLRGVAWHQHIIAFAVATNDDVVRIYDKSSTC-P----------TKLKS------VSQRNVTCLAWRPLSASELAVGCR 161 (445)
T ss_pred cceeeEeechhhhhhhhhccCcEEEEeccCCCC-C----------ceecc------hhhcceeEEEeccCCcceeeeeec
Confidence 346788999977778999999999999966521 1 11111 12356999999995 456777775
Q ss_pred CCeEEEEECCCce---------------EEEecCccCCeEEEEEecCCCEEEEEec-CCeEEEEEcCCCceEEEEeeccC
Q 010754 295 DGQARIWSTNGDL---------------KCTLSKHKGPIFSLKWNKKGDYLLTGSC-DKTAIVWDVKTEEWKQQFEFHSG 358 (502)
Q Consensus 295 dg~i~iwd~~~~~---------------~~~~~~~~~~v~~l~~~~~~~~l~s~~~-d~~i~~wd~~~~~~~~~~~~~~~ 358 (502)
+-|.||..+... +....+| .+|++|.|+++|..+++++. |..|.|||..++..+.......+
T Consensus 162 -~gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glg 239 (445)
T KOG2139|consen 162 -AGICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLG 239 (445)
T ss_pred -ceeEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCC
Confidence 669999754211 1122334 68999999999999998876 56899999999987776656677
Q ss_pred CeEEEEecCCC-EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCC-------
Q 010754 359 PTLDVDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD------- 430 (502)
Q Consensus 359 ~v~~v~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~------- 430 (502)
.+.-+.|+|++ .|+++..|+..++|+....-......-..+.|...+|+|+|++|+-.+. |.-++|.+...
T Consensus 240 g~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw~lgsgrvqtacWspcGsfLLf~~s-gsp~lysl~f~~~~~~~~ 318 (445)
T KOG2139|consen 240 GFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKERWILGSGRVQTACWSPCGSFLLFACS-GSPRLYSLTFDGEDSVFL 318 (445)
T ss_pred ceeeEEEcCCCCEEEEecccceeeeehhcccceecceeccCCceeeeeecCCCCEEEEEEc-CCceEEEEeecCCCcccc
Confidence 88999998865 5778889999999965443222222223458999999999997654432 22344443210
Q ss_pred --------eeEEEec-----c----CCCcEEEEEEccCCC
Q 010754 431 --------KYVHDLR-----E----HSKEIYTIRWSPTGS 453 (502)
Q Consensus 431 --------~~~~~~~-----~----h~~~i~~v~~sp~g~ 453 (502)
.++..+. . -.+++.+++|.|.|.
T Consensus 319 ~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGe 358 (445)
T KOG2139|consen 319 RPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGE 358 (445)
T ss_pred CcccceeeeeeccchhhhhhcCcccccCccceeeECCCCC
Confidence 1111111 1 146789999999998
No 211
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.57 E-value=3.9e-13 Score=117.73 Aligned_cols=154 Identities=20% Similarity=0.412 Sum_probs=111.8
Q ss_pred eEEEEECCCCCEEEEEEC----------CCeEEEEEC--CCceEEEecC-ccCCeEEEEEecCCCEEEEE--ecCCeEEE
Q 010754 277 VTTLDWNGEGTLLATGSY----------DGQARIWST--NGDLKCTLSK-HKGPIFSLKWNKKGDYLLTG--SCDKTAIV 341 (502)
Q Consensus 277 v~~l~~s~~g~~l~s~~~----------dg~i~iwd~--~~~~~~~~~~-~~~~v~~l~~~~~~~~l~s~--~~d~~i~~ 341 (502)
-..+.|+++|++|++-.. -|...+|.+ .+.....+.- ..++|.+++|+|+|+.|+++ ..++.|.+
T Consensus 8 ~~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~l 87 (194)
T PF08662_consen 8 DAKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTL 87 (194)
T ss_pred eEEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEE
Confidence 456889999987765543 134455544 3444444432 44579999999999987654 46789999
Q ss_pred EEcCCCceEEEEeeccCCeEEEEecCCCE-EEEEeC---CCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEe
Q 010754 342 WDVKTEEWKQQFEFHSGPTLDVDWRNNVS-FATSST---DNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS 417 (502)
Q Consensus 342 wd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~~~~---d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s 417 (502)
||++ ++.+..+ ....+..+.|+|.+. +++++. .|.|.+||+++.+.+.++. | ..++.++|+|+|++|++++
T Consensus 88 yd~~-~~~i~~~--~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~-~-~~~t~~~WsPdGr~~~ta~ 162 (194)
T PF08662_consen 88 YDVK-GKKIFSF--GTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE-H-SDATDVEWSPDGRYLATAT 162 (194)
T ss_pred EcCc-ccEeEee--cCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc-c-CcEEEEEEcCCCCEEEEEE
Confidence 9996 5555544 456788999998775 555543 4679999999888887775 3 3478999999999999987
Q ss_pred C------CCcEEEEECCCCeeEEEe
Q 010754 418 D------DVTAKIWNMKQDKYVHDL 436 (502)
Q Consensus 418 ~------dg~i~iwd~~~~~~~~~~ 436 (502)
. |+.++||+.. |+++...
T Consensus 163 t~~r~~~dng~~Iw~~~-G~~l~~~ 186 (194)
T PF08662_consen 163 TSPRLRVDNGFKIWSFQ-GRLLYKK 186 (194)
T ss_pred eccceeccccEEEEEec-CeEeEec
Confidence 4 7889999974 6666544
No 212
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.57 E-value=3.1e-13 Score=127.95 Aligned_cols=251 Identities=13% Similarity=0.221 Sum_probs=173.1
Q ss_pred CCCceEEEEEcCCCCe-EEEEeCCCcEEEEecCCCCccC--CCCCCCceeEEEe-------------eecCc-------c
Q 010754 214 HTSEVCACAWSPAGSL-LASGSGDSTARIWTIADGTSNG--GAQNGPLNVLVLK-------------HVKGR-------T 270 (502)
Q Consensus 214 H~~~V~~~~~~p~~~~-l~sgs~dg~v~iw~~~~~~~~~--~~~~~~~~~~~~~-------------~~~~~-------~ 270 (502)
|....+.|..+|||++ +|||..--.|++||+.+-.+.- .+....+....+. .+..+ .
T Consensus 50 ~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G~hy~ 129 (703)
T KOG2321|consen 50 MPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYGRHYR 129 (703)
T ss_pred CccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhcCeeee
Confidence 4566778999999985 6777788899999998643211 1111111111110 00000 0
Q ss_pred ccCCCCeEEEEECCCCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCce
Q 010754 271 NEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEW 349 (502)
Q Consensus 271 ~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~ 349 (502)
......-..|+++.-..-|++++....|+-++++ |..+..+....+.++++..++...+|++|+.+|.|-.||.++...
T Consensus 130 ~RIP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksr 209 (703)
T KOG2321|consen 130 TRIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSR 209 (703)
T ss_pred eecCcCCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhhh
Confidence 0111223445555433334555555677777776 566666777779999999999999999999999999999998876
Q ss_pred EEEEee------ccC-----CeEEEEecCCC-EEEEEeCCCeEEEEEcCCCcceEEEe-cCCCcEEEEEEcCC--CCEEE
Q 010754 350 KQQFEF------HSG-----PTLDVDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFA-GHQGEVNCVKWDPT--GSLLA 414 (502)
Q Consensus 350 ~~~~~~------~~~-----~v~~v~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~-~h~~~i~~l~~sp~--g~~la 414 (502)
+..+.. +.+ .|+++.|++++ .+++|...|.+.|||++..+|+..-. +..-+|..+.|.+. +..|+
T Consensus 210 v~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~ 289 (703)
T KOG2321|consen 210 VGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVV 289 (703)
T ss_pred heeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceEE
Confidence 666543 222 48999998854 59999999999999999999876543 22457999999876 44555
Q ss_pred EEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEE
Q 010754 415 SCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLY 473 (502)
Q Consensus 415 s~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~i 473 (502)
|.. ...++|||-.+|+....+. .+..+..+|+-|++. ++++|--+..+..
T Consensus 290 S~D-k~~~kiWd~~~Gk~~asiE-pt~~lND~C~~p~sG-------m~f~Ane~~~m~~ 339 (703)
T KOG2321|consen 290 SMD-KRILKIWDECTGKPMASIE-PTSDLNDFCFVPGSG-------MFFTANESSKMHT 339 (703)
T ss_pred ecc-hHHhhhcccccCCceeecc-ccCCcCceeeecCCc-------eEEEecCCCccee
Confidence 543 4579999999999988887 445699999999987 6777766655433
No 213
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.57 E-value=3.2e-14 Score=133.78 Aligned_cols=203 Identities=22% Similarity=0.353 Sum_probs=146.7
Q ss_pred cCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECC-Cce-EEEecCccCCeEEEEEec--CCCEEEEEecCCeEEEE
Q 010754 267 KGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDL-KCTLSKHKGPIFSLKWNK--KGDYLLTGSCDKTAIVW 342 (502)
Q Consensus 267 ~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~-~~~-~~~~~~~~~~v~~l~~~~--~~~~l~s~~~d~~i~~w 342 (502)
.....+|.+.|.|+.|+.+|.+|++|+.|-.+.|||.- .++ ...-.+|...|.+++|-| +...+++|..|..|++|
T Consensus 43 E~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lf 122 (758)
T KOG1310|consen 43 EAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLF 122 (758)
T ss_pred hhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEE
Confidence 34567889999999999999999999999999999954 333 345578999999999998 44688899999999999
Q ss_pred EcCCC----------ceEEEEeeccCCeEEEEecCC--CEEEEEeCCCeEEEEEcCCCcce----------EEEecCCCc
Q 010754 343 DVKTE----------EWKQQFEFHSGPTLDVDWRNN--VSFATSSTDNMIYVCKIGENRPI----------KTFAGHQGE 400 (502)
Q Consensus 343 d~~~~----------~~~~~~~~~~~~v~~v~~~~~--~~~~~~~~d~~i~i~d~~~~~~~----------~~~~~h~~~ 400 (502)
|+... .....+..|...|-.++-.|+ ..|.+++.||+|+.+|++..... ..+...--.
T Consensus 123 dl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~lie 202 (758)
T KOG1310|consen 123 DLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLIE 202 (758)
T ss_pred ecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhhe
Confidence 99742 233445567777777777554 46999999999999999874211 111111234
Q ss_pred EEEEEEcCC-CCEEEEEeCCCcEEEEECCC--------C----------eeEEEec-cCC-----------CcEEEEEEc
Q 010754 401 VNCVKWDPT-GSLLASCSDDVTAKIWNMKQ--------D----------KYVHDLR-EHS-----------KEIYTIRWS 449 (502)
Q Consensus 401 i~~l~~sp~-g~~las~s~dg~i~iwd~~~--------~----------~~~~~~~-~h~-----------~~i~~v~~s 449 (502)
..|+.++|. ..+||.|+.|-..++||.+. + .|+..+. +|- ..++-+.|+
T Consensus 203 lk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vtfn 282 (758)
T KOG1310|consen 203 LKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTYVTFN 282 (758)
T ss_pred eeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeEEEEEC
Confidence 678899996 45789999999999999431 1 1233332 222 126778999
Q ss_pred cCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 450 PTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 450 p~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
|+|. .+++.-+...+.+++.
T Consensus 283 pNGt-------ElLvs~~gEhVYlfdv 302 (758)
T KOG1310|consen 283 PNGT-------ELLVSWGGEHVYLFDV 302 (758)
T ss_pred CCCc-------EEEEeeCCeEEEEEee
Confidence 9998 5555555555655543
No 214
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.56 E-value=2.4e-13 Score=127.74 Aligned_cols=168 Identities=15% Similarity=0.308 Sum_probs=132.6
Q ss_pred CCCCCEEEEEECCCeEEEEECCCceEEE-----ecCccCCeEEEEEecCC-CEEEEEecCCeEEEEEcCC----------
Q 010754 283 NGEGTLLATGSYDGQARIWSTNGDLKCT-----LSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKT---------- 346 (502)
Q Consensus 283 s~~g~~l~s~~~dg~i~iwd~~~~~~~~-----~~~~~~~v~~l~~~~~~-~~l~s~~~d~~i~~wd~~~---------- 346 (502)
.+.+--++.|-..|.|.+.|........ ..-.+..|++++|-|.+ ..|+++-.+|.+++||..-
T Consensus 182 ~~~g~dllIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~ 261 (636)
T KOG2394|consen 182 TPKGLDLLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQ 261 (636)
T ss_pred CCCCcceEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCccc
Confidence 3566678888888999999854322211 11234789999999955 5677778899999997531
Q ss_pred ----Cc--------------eEEEEeeccCCeEEEEecCCCE-EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEc
Q 010754 347 ----EE--------------WKQQFEFHSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWD 407 (502)
Q Consensus 347 ----~~--------------~~~~~~~~~~~v~~v~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~s 407 (502)
+. ++..+....+.|..++|++++. +++.+.||.++|||..+...+..++..-+...|++||
T Consensus 262 ~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWS 341 (636)
T KOG2394|consen 262 ALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWS 341 (636)
T ss_pred ccCCCCeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEc
Confidence 11 1111222345678888877654 8899999999999999988888777777889999999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEcc
Q 010754 408 PTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSP 450 (502)
Q Consensus 408 p~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp 450 (502)
|||+||++|++|.-|.||.+...+.+..-++|.+.|..|+|.|
T Consensus 342 PDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 342 PDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred CCccEEEecCCcceEEEEEeccceEEEeccccccceeeEeecc
Confidence 9999999999999999999999999999999999999999995
No 215
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.56 E-value=3.5e-12 Score=122.94 Aligned_cols=224 Identities=11% Similarity=0.156 Sum_probs=142.7
Q ss_pred EEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE-CCCeEEEEECCC-ce
Q 010754 230 LASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS-YDGQARIWSTNG-DL 307 (502)
Q Consensus 230 l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~-~dg~i~iwd~~~-~~ 307 (502)
+++...|+.|.+|++.+.... ..+..+. .......++++|++++|++++ .++.|.+|+++. ..
T Consensus 5 y~~~~~~~~I~~~~~~~~g~l----------~~~~~~~-----~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~ 69 (330)
T PRK11028 5 YIASPESQQIHVWNLNHEGAL----------TLLQVVD-----VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGA 69 (330)
T ss_pred EEEcCCCCCEEEEEECCCCce----------eeeeEEe-----cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCc
Confidence 444467899999999642110 0111111 123467889999999987775 478999999863 21
Q ss_pred EE--EecCccCCeEEEEEecCCCEEEEEec-CCeEEEEEcCC-Cc---eEEEEeeccCCeEEEEecCCCE-E-EEEeCCC
Q 010754 308 KC--TLSKHKGPIFSLKWNKKGDYLLTGSC-DKTAIVWDVKT-EE---WKQQFEFHSGPTLDVDWRNNVS-F-ATSSTDN 378 (502)
Q Consensus 308 ~~--~~~~~~~~v~~l~~~~~~~~l~s~~~-d~~i~~wd~~~-~~---~~~~~~~~~~~v~~v~~~~~~~-~-~~~~~d~ 378 (502)
.. ......+....++|+|++++|++++. ++.|.+|++.+ +. .+..+. +......+.++|++. + ++...++
T Consensus 70 l~~~~~~~~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~ 148 (330)
T PRK11028 70 LTFAAESPLPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKED 148 (330)
T ss_pred eEEeeeecCCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCC
Confidence 11 11123345678999999999888765 88999999964 22 222222 223456677877654 3 4556679
Q ss_pred eEEEEEcCCCcceEE-----Ee-cCCCcEEEEEEcCCCCEEEEEeC-CCcEEEEECCC--C--eeEEEeccC------CC
Q 010754 379 MIYVCKIGENRPIKT-----FA-GHQGEVNCVKWDPTGSLLASCSD-DVTAKIWNMKQ--D--KYVHDLREH------SK 441 (502)
Q Consensus 379 ~i~i~d~~~~~~~~~-----~~-~h~~~i~~l~~sp~g~~las~s~-dg~i~iwd~~~--~--~~~~~~~~h------~~ 441 (502)
.|.+||+.+...+.. .. ........+.|+|+|++|++++. ++.|.+|++.. + +.+..+..+ ..
T Consensus 149 ~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~ 228 (330)
T PRK11028 149 RIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTR 228 (330)
T ss_pred EEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCc
Confidence 999999976432211 11 12234678999999999988876 89999999973 3 334443321 11
Q ss_pred cEEEEEEccCCCCCCCCCccEEEEe-ecCceEEEEe
Q 010754 442 EIYTIRWSPTGSGTNNPNQQLILAR-LIPYFLYWIC 476 (502)
Q Consensus 442 ~i~~v~~sp~g~~~~~~~~~l~las-~~~~~~iw~~ 476 (502)
....+.|+|+|. .++++. .++.+.+|..
T Consensus 229 ~~~~i~~~pdg~-------~lyv~~~~~~~I~v~~i 257 (330)
T PRK11028 229 WAADIHITPDGR-------HLYACDRTASLISVFSV 257 (330)
T ss_pred cceeEEECCCCC-------EEEEecCCCCeEEEEEE
Confidence 234688999987 555553 3567777764
No 216
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.55 E-value=1.7e-12 Score=129.24 Aligned_cols=247 Identities=23% Similarity=0.317 Sum_probs=182.9
Q ss_pred CceEEeccCCCceEEEEEcCCC---CeEEEEeCCCcEEEEecCCCCccCCCCCCC---------------ce--------
Q 010754 206 SDVTILEGHTSEVCACAWSPAG---SLLASGSGDSTARIWTIADGTSNGGAQNGP---------------LN-------- 259 (502)
Q Consensus 206 ~~~~~l~~H~~~V~~~~~~p~~---~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~---------------~~-------- 259 (502)
..++.|.+|..++..+.+.|.. .++.+++.||+|++||...+..+..+.... ..
T Consensus 48 ~~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt~~~~~~v~~~~~~~~~a~~s~~~~~s~~~~ 127 (792)
T KOG1963|consen 48 ECITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKTFDNNLPVHALVYKPAQADISANVYVSVEDY 127 (792)
T ss_pred hhhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEEEecCCceeEEEechhHhCccceeEeecccc
Confidence 3467899999999999999964 477899999999999987654332211000 00
Q ss_pred ----------------------------------------------eEEE---------------ee--ecCccccCCCC
Q 010754 260 ----------------------------------------------VLVL---------------KH--VKGRTNEKSKD 276 (502)
Q Consensus 260 ----------------------------------------------~~~~---------------~~--~~~~~~~~~~~ 276 (502)
...+ ++ .......|...
T Consensus 128 ~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~~~ge~~~i~~~~~~~~~~v~~~~~~~~~~~~~~~Htf~ 207 (792)
T KOG1963|consen 128 SILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDNNSGEFKGIVHMCKIHIYFVPKHTKHTSSRDITVHHTFN 207 (792)
T ss_pred eeeeecccccccceeeeEeeeccccchhhhhhhcCCccEEEcCCceEEEEEEeeeEEEEEecccceeeccchhhhhhccc
Confidence 0000 00 00011135556
Q ss_pred eEEEEECCCCCEEEEEECCCeEEEEECC-----CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEE
Q 010754 277 VTTLDWNGEGTLLATGSYDGQARIWSTN-----GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQ 351 (502)
Q Consensus 277 v~~l~~s~~g~~l~s~~~dg~i~iwd~~-----~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~ 351 (502)
+++.++||+++++|+|..||.|.+|.-- ......+.-|...|.++.|+++|.+|++|+..|.+.+|.+.+++ .+
T Consensus 208 ~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~-kq 286 (792)
T KOG1963|consen 208 ITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK-KQ 286 (792)
T ss_pred ceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCC-cc
Confidence 8999999999999999999999999732 23455677899999999999999999999999999999999998 55
Q ss_pred EEeeccCCeEEEEecCCC-EEEEEeCCCeEEEEEcCCCcceEEEecC-----------CCcEEEEEEcCCCCEEEEEeCC
Q 010754 352 QFEFHSGPTLDVDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFAGH-----------QGEVNCVKWDPTGSLLASCSDD 419 (502)
Q Consensus 352 ~~~~~~~~v~~v~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~h-----------~~~i~~l~~sp~g~~las~s~d 419 (502)
-+..-.++|..+.+++++ .+++...|+.|.+....+.....++.|- .+-.+.++++|.-+.++-.+..
T Consensus 287 fLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~ 366 (792)
T KOG1963|consen 287 FLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHP 366 (792)
T ss_pred cccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCceeecCCC
Confidence 566678899999998765 4677888999999887655433333321 3446788999988888899999
Q ss_pred CcEEEEECCCCeeEEEec-----c------CCCcEEEEEEccCCC
Q 010754 420 VTAKIWNMKQDKYVHDLR-----E------HSKEIYTIRWSPTGS 453 (502)
Q Consensus 420 g~i~iwd~~~~~~~~~~~-----~------h~~~i~~v~~sp~g~ 453 (502)
|.|.+||+-+.+.+..+. . +.-.|++++.+-.|+
T Consensus 367 g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs 411 (792)
T KOG1963|consen 367 GHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGS 411 (792)
T ss_pred ceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccce
Confidence 999999998877765553 1 122477888888877
No 217
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.54 E-value=8.7e-13 Score=115.52 Aligned_cols=146 Identities=25% Similarity=0.474 Sum_probs=104.7
Q ss_pred EEEEEecCCCEEEEEec----------CCeEEEEEcCC-CceEEEEee-ccCCeEEEEecCCC-EEEEE--eCCCeEEEE
Q 010754 319 FSLKWNKKGDYLLTGSC----------DKTAIVWDVKT-EEWKQQFEF-HSGPTLDVDWRNNV-SFATS--STDNMIYVC 383 (502)
Q Consensus 319 ~~l~~~~~~~~l~s~~~----------d~~i~~wd~~~-~~~~~~~~~-~~~~v~~v~~~~~~-~~~~~--~~d~~i~i~ 383 (502)
..+.|+|+|++|++-.. -+...+|.++. +.....+.. ..++|.+++|+|++ .|++. ..++.|.+|
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ly 88 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLY 88 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEE
Confidence 46889999988775433 13355555532 233444443 34579999998865 45443 467799999
Q ss_pred EcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeC---CCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCc
Q 010754 384 KIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD---DVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQ 460 (502)
Q Consensus 384 d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~---dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~ 460 (502)
|++ ++.+..+. ...++.|.|+|+|++|++|+. .|.|.+||+++.+.+.... |. .++.++|+|||+
T Consensus 89 d~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~-~~-~~t~~~WsPdGr------- 156 (194)
T PF08662_consen 89 DVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE-HS-DATDVEWSPDGR------- 156 (194)
T ss_pred cCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc-cC-cEEEEEEcCCCC-------
Confidence 996 66666664 567889999999999999875 4679999999999887765 33 478999999999
Q ss_pred cEEEEeec------CceEEEEe
Q 010754 461 QLILARLI------PYFLYWIC 476 (502)
Q Consensus 461 ~l~las~~------~~~~iw~~ 476 (502)
.+++++.. ..++||.+
T Consensus 157 ~~~ta~t~~r~~~dng~~Iw~~ 178 (194)
T PF08662_consen 157 YLATATTSPRLRVDNGFKIWSF 178 (194)
T ss_pred EEEEEEeccceeccccEEEEEe
Confidence 77777653 44666653
No 218
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.54 E-value=3.5e-12 Score=127.34 Aligned_cols=195 Identities=14% Similarity=0.202 Sum_probs=136.3
Q ss_pred CCCCeEEEEECCCCCEEEEEEC---CCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEE-EEecCCe--EEEEEcCC
Q 010754 273 KSKDVTTLDWNGEGTLLATGSY---DGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLL-TGSCDKT--AIVWDVKT 346 (502)
Q Consensus 273 ~~~~v~~l~~s~~g~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-s~~~d~~--i~~wd~~~ 346 (502)
+...+.+.+|+|||+.|+..+. +..|.+||+.+.....+..+.+.+...+|+|+|+.|+ +.+.++. |++||+.+
T Consensus 200 ~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~ 279 (435)
T PRK05137 200 GSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRS 279 (435)
T ss_pred CCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEeecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCC
Confidence 3457999999999999888764 3689999998776666667777888999999998876 5555554 77889888
Q ss_pred CceEEEEeeccCCeEEEEecCCCE-EEEEeC-C--CeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCC---
Q 010754 347 EEWKQQFEFHSGPTLDVDWRNNVS-FATSST-D--NMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD--- 419 (502)
Q Consensus 347 ~~~~~~~~~~~~~v~~v~~~~~~~-~~~~~~-d--~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~d--- 419 (502)
+... .+..+........|+|++. ++..+. + ..|+++|+..+.. ..+..+...+....|+|+|++|+..+.+
T Consensus 280 ~~~~-~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~-~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~ 357 (435)
T PRK05137 280 GTTT-RLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNP-RRISFGGGRYSTPVWSPRGDLIAFTKQGGGQ 357 (435)
T ss_pred CceE-EccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCe-EEeecCCCcccCeEECCCCCEEEEEEcCCCc
Confidence 7654 3544555567789988765 554443 2 3688889876654 3443345567778999999999887653
Q ss_pred CcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecC-c---eEEEEeee
Q 010754 420 VTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIP-Y---FLYWICSI 478 (502)
Q Consensus 420 g~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~-~---~~iw~~~~ 478 (502)
..|.+||+.++. ...+. ....+..+.|+|||+ .++.++... . ..+|..++
T Consensus 358 ~~i~~~d~~~~~-~~~lt-~~~~~~~p~~spDG~-------~i~~~~~~~~~~~~~~L~~~dl 411 (435)
T PRK05137 358 FSIGVMKPDGSG-ERILT-SGFLVEGPTWAPNGR-------VIMFFRQTPGSGGAPKLYTVDL 411 (435)
T ss_pred eEEEEEECCCCc-eEecc-CCCCCCCCeECCCCC-------EEEEEEccCCCCCcceEEEEEC
Confidence 358888876544 33333 223477889999998 555554432 2 35666544
No 219
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.53 E-value=2.7e-12 Score=128.05 Aligned_cols=194 Identities=14% Similarity=0.148 Sum_probs=133.7
Q ss_pred CCCeEEEEECCCCCEEEEEECC---CeEEEEECCCceEEEecCccCCeEEEEEecCCCEEE-EEecCC--eEEEEEcCCC
Q 010754 274 SKDVTTLDWNGEGTLLATGSYD---GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLL-TGSCDK--TAIVWDVKTE 347 (502)
Q Consensus 274 ~~~v~~l~~s~~g~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-s~~~d~--~i~~wd~~~~ 347 (502)
...+.+.+|+|||+.|+.++.. ..|.+|++.+.....+....+...++.|+|+|+.|+ +.+.+| .|++||+.++
T Consensus 203 ~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g 282 (433)
T PRK04922 203 AEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSR 282 (433)
T ss_pred CCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCC
Confidence 4468899999999999988744 469999998766555555566667889999998776 445555 5999999888
Q ss_pred ceEEEEeeccCCeEEEEecCCCE-EEEEeC-CC--eEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCC---
Q 010754 348 EWKQQFEFHSGPTLDVDWRNNVS-FATSST-DN--MIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDV--- 420 (502)
Q Consensus 348 ~~~~~~~~~~~~v~~v~~~~~~~-~~~~~~-d~--~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg--- 420 (502)
.... +..+........|++++. ++.++. ++ .|+++++.+++.. .+..+......++|+|+|++|+..+.++
T Consensus 283 ~~~~-lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~-~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~ 360 (433)
T PRK04922 283 QLTR-LTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAE-RLTFQGNYNARASVSPDGKKIAMVHGSGGQY 360 (433)
T ss_pred CeEE-CccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeE-EeecCCCCccCEEECCCCCEEEEEECCCCce
Confidence 7543 444544556789988765 554443 34 4777777666543 3333334455789999999998766543
Q ss_pred cEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeec-CceEEEEeee
Q 010754 421 TAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLI-PYFLYWICSI 478 (502)
Q Consensus 421 ~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~-~~~~iw~~~~ 478 (502)
.|.+||+.+++.. .+. +........|+|||. .++..+.. +...+|..+.
T Consensus 361 ~I~v~d~~~g~~~-~Lt-~~~~~~~p~~spdG~-------~i~~~s~~~g~~~L~~~~~ 410 (433)
T PRK04922 361 RIAVMDLSTGSVR-TLT-PGSLDESPSFAPNGS-------MVLYATREGGRGVLAAVST 410 (433)
T ss_pred eEEEEECCCCCeE-ECC-CCCCCCCceECCCCC-------EEEEEEecCCceEEEEEEC
Confidence 5999999887754 443 333456789999998 55554443 4556666544
No 220
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.53 E-value=1.7e-13 Score=128.74 Aligned_cols=170 Identities=21% Similarity=0.265 Sum_probs=128.5
Q ss_pred CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC-CEEEEEECCCeEEEEECC
Q 010754 226 AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG-TLLATGSYDGQARIWSTN 304 (502)
Q Consensus 226 ~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g-~~l~s~~~dg~i~iwd~~ 304 (502)
.+--|+.|-.-|.|.+.|....+... + +.....-....|+|+.|-|.+ ..++++-.+|.+.+||..
T Consensus 184 ~g~dllIGf~tGqvq~idp~~~~~sk-l------------fne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~ 250 (636)
T KOG2394|consen 184 KGLDLLIGFTTGQVQLIDPINFEVSK-L------------FNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKE 250 (636)
T ss_pred CCcceEEeeccCceEEecchhhHHHH-h------------hhhcccccccceEEEEEEeCCCceEEEEEecCceEEeecc
Confidence 45567777777888888765422110 0 111111123579999999954 466777788999999742
Q ss_pred C---------------ce--------------EEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEee
Q 010754 305 G---------------DL--------------KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF 355 (502)
Q Consensus 305 ~---------------~~--------------~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 355 (502)
- .. +..+.-..+.|..++|+|||++|++.+.||.++|||..+.+++..++.
T Consensus 251 ~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkS 330 (636)
T KOG2394|consen 251 IVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKS 330 (636)
T ss_pred ccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHh
Confidence 1 00 011112345788999999999999999999999999999888777777
Q ss_pred ccCCeEEEEecCCCE-EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcC
Q 010754 356 HSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP 408 (502)
Q Consensus 356 ~~~~v~~v~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp 408 (502)
.-+...+++|+|+++ +++|+.|..|.||.+...+.+..-.+|.++|+.|+|+|
T Consensus 331 YFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 331 YFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred hccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccceeeEeecc
Confidence 778899999999876 77899999999999999999999999999999999984
No 221
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.52 E-value=1.4e-12 Score=118.29 Aligned_cols=226 Identities=15% Similarity=0.218 Sum_probs=168.5
Q ss_pred EeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC-E
Q 010754 210 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT-L 288 (502)
Q Consensus 210 ~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~-~ 288 (502)
...+.+++|..++.. ++ .|++|-.+|.+.+|....+... .. ....+.. ...+..|.-++... +
T Consensus 100 ~~~l~~~~I~gl~~~-dg-~Litc~~sG~l~~~~~k~~d~h----ss--~l~~la~--------g~g~~~~r~~~~~p~I 163 (412)
T KOG3881|consen 100 TVSLGTKSIKGLKLA-DG-TLITCVSSGNLQVRHDKSGDLH----SS--KLIKLAT--------GPGLYDVRQTDTDPYI 163 (412)
T ss_pred ccccccccccchhhc-CC-EEEEEecCCcEEEEeccCCccc----cc--cceeeec--------CCceeeeccCCCCCce
Confidence 444556777776654 34 5777788899999998854321 00 0011111 13466666666444 5
Q ss_pred EEEEECC--CeEEEEECCCceEEEecCc-----------cCCeEEEEEecC--CCEEEEEecCCeEEEEEcCCC-ceEEE
Q 010754 289 LATGSYD--GQARIWSTNGDLKCTLSKH-----------KGPIFSLKWNKK--GDYLLTGSCDKTAIVWDVKTE-EWKQQ 352 (502)
Q Consensus 289 l~s~~~d--g~i~iwd~~~~~~~~~~~~-----------~~~v~~l~~~~~--~~~l~s~~~d~~i~~wd~~~~-~~~~~ 352 (502)
+++|+.. ..+.|||+++. ...+.+- .--++++.|-+. ...|++++.-+.+++||.+.+ +++..
T Consensus 164 va~GGke~~n~lkiwdle~~-~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~ 242 (412)
T KOG3881|consen 164 VATGGKENINELKIWDLEQS-KQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQ 242 (412)
T ss_pred EecCchhcccceeeeecccc-eeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeE
Confidence 5668887 78999998865 4433321 123567888887 789999999999999999865 46788
Q ss_pred EeeccCCeEEEEecCC-CEEEEEeCCCeEEEEEcCCCcceEE-EecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q 010754 353 FEFHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKT-FAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD 430 (502)
Q Consensus 353 ~~~~~~~v~~v~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~-~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~ 430 (502)
|.....+++++...+. +.+++|..-+.+..||++.++.+.. +.+-.+.|++|..+|.+++||+|+-|..|||+|+.+.
T Consensus 243 fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktr 322 (412)
T KOG3881|consen 243 FDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTR 322 (412)
T ss_pred eccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccc
Confidence 8888889999988664 5578888999999999999988776 8888999999999999999999999999999999998
Q ss_pred eeEEEeccCCCcEEEEEEccCCC
Q 010754 431 KYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 431 ~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
++++... -.+.++.|-+.++-+
T Consensus 323 kll~kvY-vKs~lt~il~~~~~n 344 (412)
T KOG3881|consen 323 KLLHKVY-VKSRLTFILLRDDVN 344 (412)
T ss_pred hhhhhhh-hhccccEEEecCCcc
Confidence 8776655 344578888877654
No 222
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.52 E-value=1e-14 Score=143.40 Aligned_cols=198 Identities=20% Similarity=0.333 Sum_probs=157.5
Q ss_pred ccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC
Q 010754 269 RTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE 347 (502)
Q Consensus 269 ~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~ 347 (502)
...+|-..|+|+.|...|.++++|+.|..++||..++ .+.....+|.+.|+.++.+.+...+++++.|..|++|.+.++
T Consensus 185 rLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~ 264 (1113)
T KOG0644|consen 185 RLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDG 264 (1113)
T ss_pred HHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCC
Confidence 3456778899999999999999999999999999764 566788999999999999999889999999999999999999
Q ss_pred ceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCc------c--------eEEEe----------c------C
Q 010754 348 EWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENR------P--------IKTFA----------G------H 397 (502)
Q Consensus 348 ~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~------~--------~~~~~----------~------h 397 (502)
.++..+.+|.+.|++++|+|-. +.+.||++++||.+-.- + +..+. + .
T Consensus 265 ~pvsvLrghtgavtaiafsP~~---sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~ 341 (1113)
T KOG0644|consen 265 APVSVLRGHTGAVTAIAFSPRA---SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEAR 341 (1113)
T ss_pred chHHHHhccccceeeeccCccc---cCCCCCceEeccccccccccCCCCCCcccccceeeeeccccccccccccCCcccc
Confidence 9999999999999999999865 77899999999987110 0 00000 0 0
Q ss_pred CCcEEEEEEcCCCC-----------EEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEe
Q 010754 398 QGEVNCVKWDPTGS-----------LLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILAR 466 (502)
Q Consensus 398 ~~~i~~l~~sp~g~-----------~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las 466 (502)
...+-+++|...+- +.+++-.+..+++|++.+|.+++.+.+|...++.+.++|-.+. .-+.|+
T Consensus 342 n~e~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~r------i~msag 415 (1113)
T KOG0644|consen 342 NHEFEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPR------IAMSAG 415 (1113)
T ss_pred cchhhHhhhhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeeecCCCcH------hhhhcc
Confidence 01122233333333 3334445667899999999999999999999999999998771 236678
Q ss_pred ecCceEEEE
Q 010754 467 LIPYFLYWI 475 (502)
Q Consensus 467 ~~~~~~iw~ 475 (502)
.|+...||+
T Consensus 416 ~dgst~iwd 424 (1113)
T KOG0644|consen 416 YDGSTIIWD 424 (1113)
T ss_pred CCCceEeee
Confidence 889999996
No 223
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=99.51 E-value=3e-12 Score=113.56 Aligned_cols=235 Identities=17% Similarity=0.309 Sum_probs=162.8
Q ss_pred CceEEEEEcCCCCe-EEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCE-EEEEE
Q 010754 216 SEVCACAWSPAGSL-LASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL-LATGS 293 (502)
Q Consensus 216 ~~V~~~~~~p~~~~-l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~-l~s~~ 293 (502)
+.|.-+.|..+.-+ |.....|+.|.+|++...+.... .......+.+++|||||+. |.+..
T Consensus 49 dki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ck-----------------Ideg~agls~~~WSPdgrhiL~tse 111 (447)
T KOG4497|consen 49 DKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCK-----------------IDEGQAGLSSISWSPDGRHILLTSE 111 (447)
T ss_pred HHhhheeeeccceeeeeeeeccceEEEEEeecceeEEE-----------------eccCCCcceeeeECCCcceEeeeec
Confidence 56788899988754 55557788999999876442211 1223467999999999965 45566
Q ss_pred CCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecC------------------------------------C
Q 010754 294 YDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD------------------------------------K 337 (502)
Q Consensus 294 ~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d------------------------------------~ 337 (502)
.+-.|.+|.+.++....+.-.+..+..++|+|+|++.+.++.- .
T Consensus 112 F~lriTVWSL~t~~~~~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~ 191 (447)
T KOG4497|consen 112 FDLRITVWSLNTQKGYLLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGN 191 (447)
T ss_pred ceeEEEEEEeccceeEEecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCc
Confidence 7889999999887776666666777899999999987766532 2
Q ss_pred eEEEEEcCCCceEEEEeeccCCeEEEEecC-CCEEEEEeCCCeEEEEEcCCCcceE------------------------
Q 010754 338 TAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIK------------------------ 392 (502)
Q Consensus 338 ~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~~~~d~~i~i~d~~~~~~~~------------------------ 392 (502)
.+.+||.--.-.+..+. ..-.+..+.|+| +..+++|+.|+.+++.+--+.++..
T Consensus 192 ~laVwd~~Leykv~aYe-~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ 270 (447)
T KOG4497|consen 192 WLAVWDNVLEYKVYAYE-RGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIV 270 (447)
T ss_pred EEEEecchhhheeeeee-eccceeEEEeccccceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchh
Confidence 34455432211111121 234678899999 5667889999998885543322110
Q ss_pred ------------------------------------EEe------cCCCcEEEEEEcCCCCEEEEEeCC--CcEEEEECC
Q 010754 393 ------------------------------------TFA------GHQGEVNCVKWDPTGSLLASCSDD--VTAKIWNMK 428 (502)
Q Consensus 393 ------------------------------------~~~------~h~~~i~~l~~sp~g~~las~s~d--g~i~iwd~~ 428 (502)
+++ ...-.+.-++|++|..++|+-.+. +.+-+||++
T Consensus 271 ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq 350 (447)
T KOG4497|consen 271 QLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQ 350 (447)
T ss_pred hhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEech
Confidence 000 011235678999999999987653 679999998
Q ss_pred CCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 429 QDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 429 ~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
..+....+. ...+|....|.|... +|++.++...+.+|..
T Consensus 351 ~l~l~avLi-Qk~piraf~WdP~~p-------rL~vctg~srLY~W~p 390 (447)
T KOG4497|consen 351 NLKLHAVLI-QKHPIRAFEWDPGRP-------RLVVCTGKSRLYFWAP 390 (447)
T ss_pred hhhhhhhhh-hccceeEEEeCCCCc-------eEEEEcCCceEEEEcC
Confidence 876644443 556899999999988 8888888888888854
No 224
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.51 E-value=1e-11 Score=111.97 Aligned_cols=189 Identities=16% Similarity=0.199 Sum_probs=141.6
Q ss_pred eEEEEEcCCCCeEEEEeCCC--cEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECC
Q 010754 218 VCACAWSPAGSLLASGSGDS--TARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 295 (502)
Q Consensus 218 V~~~~~~p~~~~l~sgs~dg--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~d 295 (502)
|.-+-|+ ..++|..+.+. .+++.++..+..++... ....|.++.++.+ .|+++-.
T Consensus 49 IvEmLFS--SSLvaiV~~~qpr~Lkv~~~Kk~~~ICe~~------------------fpt~IL~VrmNr~--RLvV~Le- 105 (391)
T KOG2110|consen 49 IVEMLFS--SSLVAIVSIKQPRKLKVVHFKKKTTICEIF------------------FPTSILAVRMNRK--RLVVCLE- 105 (391)
T ss_pred EEEeecc--cceeEEEecCCCceEEEEEcccCceEEEEe------------------cCCceEEEEEccc--eEEEEEc-
Confidence 4444454 45666665543 48888877654322110 1356999998764 5666655
Q ss_pred CeEEEEECCCceE-EEe---cCccCCeEEEEEecCCCEEEE--EecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCC
Q 010754 296 GQARIWSTNGDLK-CTL---SKHKGPIFSLKWNKKGDYLLT--GSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV 369 (502)
Q Consensus 296 g~i~iwd~~~~~~-~~~---~~~~~~v~~l~~~~~~~~l~s--~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~ 369 (502)
..|+|||++...+ .++ ..+...+.++.+++.+.+++- ....|.|.+||+.+-+.+..+..|.+++.+++|++++
T Consensus 106 e~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G 185 (391)
T KOG2110|consen 106 ESIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDG 185 (391)
T ss_pred ccEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCC
Confidence 4499999986433 332 345566777777777778884 3346899999999999999999999999999997765
Q ss_pred -EEEEEeCCCe-EEEEEcCCCcceEEEecCC--CcEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 010754 370 -SFATSSTDNM-IYVCKIGENRPIKTFAGHQ--GEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ 429 (502)
Q Consensus 370 -~~~~~~~d~~-i~i~d~~~~~~~~~~~~h~--~~i~~l~~sp~g~~las~s~dg~i~iwd~~~ 429 (502)
.+++++..|+ |||+.+.+++.+..|+.-. ..|.+++|+|++++|++.|..++|+|+.+.+
T Consensus 186 ~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~ 249 (391)
T KOG2110|consen 186 TLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEK 249 (391)
T ss_pred CEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEecc
Confidence 5888999887 5999999999998887443 3588999999999999999999999999854
No 225
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.50 E-value=6.6e-12 Score=113.95 Aligned_cols=240 Identities=15% Similarity=0.219 Sum_probs=172.6
Q ss_pred CceEEEEEcCCC--CeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE
Q 010754 216 SEVCACAWSPAG--SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 293 (502)
Q Consensus 216 ~~V~~~~~~p~~--~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~ 293 (502)
..|..++|.-++ ..|...+.|..+..+.+........... ........+.|..+... ...|++|.
T Consensus 56 ~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~-----------~~~~~l~~~~I~gl~~~--dg~Litc~ 122 (412)
T KOG3881|consen 56 DRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDD-----------AKTVSLGTKSIKGLKLA--DGTLITCV 122 (412)
T ss_pred hhhhhheeecCCceeEeeccccCcccccccccCCcccccccc-----------ccccccccccccchhhc--CCEEEEEe
Confidence 456777887654 3566555777788777776554322100 00111223456665543 33678888
Q ss_pred CCCeEEEEECC-----CceEEEecCccCCeEEEEEecCCCEEE-EEecC--CeEEEEEcCCCceEEEEeec---------
Q 010754 294 YDGQARIWSTN-----GDLKCTLSKHKGPIFSLKWNKKGDYLL-TGSCD--KTAIVWDVKTEEWKQQFEFH--------- 356 (502)
Q Consensus 294 ~dg~i~iwd~~-----~~~~~~~~~~~~~v~~l~~~~~~~~l~-s~~~d--~~i~~wd~~~~~~~~~~~~~--------- 356 (502)
.+|.+.+|... ......+..+ .++..|.-++...+|+ +|+.. ..+.+||+...+.+.+-..-
T Consensus 123 ~sG~l~~~~~k~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrV 201 (412)
T KOG3881|consen 123 SSGNLQVRHDKSGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRV 201 (412)
T ss_pred cCCcEEEEeccCCccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCcccccee
Confidence 99999999876 3344444444 5567777777665555 58888 88999999887443322211
Q ss_pred cCCeEEEEecC---CCEEEEEeCCCeEEEEEcCCC-cceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCee
Q 010754 357 SGPTLDVDWRN---NVSFATSSTDNMIYVCKIGEN-RPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY 432 (502)
Q Consensus 357 ~~~v~~v~~~~---~~~~~~~~~d~~i~i~d~~~~-~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~ 432 (502)
.-.++++.|.+ ...|++++.-+.+++||.+.+ +|+..|.--+.+|+++...|+|+++++|..-|.+..+|+++++.
T Consensus 202 PvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl 281 (412)
T KOG3881|consen 202 PVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKL 281 (412)
T ss_pred eeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCcee
Confidence 11356777744 577999999999999999866 58999988899999999999999999999999999999999998
Q ss_pred EEE-eccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 433 VHD-LREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 433 ~~~-~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
+.. +++-.+.|++|..+|.++ .+..++-|..++|++.
T Consensus 282 ~g~~~kg~tGsirsih~hp~~~-------~las~GLDRyvRIhD~ 319 (412)
T KOG3881|consen 282 LGCGLKGITGSIRSIHCHPTHP-------VLASCGLDRYVRIHDI 319 (412)
T ss_pred eccccCCccCCcceEEEcCCCc-------eEEeeccceeEEEeec
Confidence 876 889999999999999998 4555555677777753
No 226
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.50 E-value=1e-11 Score=124.12 Aligned_cols=223 Identities=14% Similarity=0.153 Sum_probs=147.1
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCC---CcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEEC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGD---STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN 283 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~d---g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s 283 (502)
..+.+..|...+...+|+|||+.|+..+.+ ..|.+|++.+++... +. . ....+...+|+
T Consensus 190 ~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~--------------l~-~---~~g~~~~~~~S 251 (430)
T PRK00178 190 RAVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ--------------IT-N---FEGLNGAPAWS 251 (430)
T ss_pred CceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE--------------cc-C---CCCCcCCeEEC
Confidence 345666777889999999999988877643 368888987764211 00 0 11234568999
Q ss_pred CCCCEEEE-EECCC--eEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEec-CC--eEEEEEcCCCceEEEEeecc
Q 010754 284 GEGTLLAT-GSYDG--QARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSC-DK--TAIVWDVKTEEWKQQFEFHS 357 (502)
Q Consensus 284 ~~g~~l~s-~~~dg--~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~-d~--~i~~wd~~~~~~~~~~~~~~ 357 (502)
|||+.|+. .+.+| .|.+||+.+.....+..+........|+|+|+.|+..+. ++ .|+++|+.+++..+. ....
T Consensus 252 pDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~l-t~~~ 330 (430)
T PRK00178 252 PDGSKLAFVLSKDGNPEIYVMDLASRQLSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERV-TFVG 330 (430)
T ss_pred CCCCEEEEEEccCCCceEEEEECCCCCeEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEe-ecCC
Confidence 99998874 44455 688889887766666666666778899999998876554 33 588888887775432 2222
Q ss_pred CCeEEEEecCCCE-EEEEeC-CC--eEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCC---CcEEEEECCCC
Q 010754 358 GPTLDVDWRNNVS-FATSST-DN--MIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD---VTAKIWNMKQD 430 (502)
Q Consensus 358 ~~v~~v~~~~~~~-~~~~~~-d~--~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~d---g~i~iwd~~~~ 430 (502)
.......|++++. ++..+. ++ .|.+||+.++... .+. +........|+|+|++|+..+.+ ..|.++++. +
T Consensus 331 ~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~-~lt-~~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~-g 407 (430)
T PRK00178 331 NYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVR-ILT-DTSLDESPSVAPNGTMLIYATRQQGRGVLMLVSIN-G 407 (430)
T ss_pred CCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEE-Ecc-CCCCCCCceECCCCCEEEEEEecCCceEEEEEECC-C
Confidence 3334567877654 444333 33 5888998877542 332 22223356899999998877654 347777775 4
Q ss_pred eeEEEeccCCCcEEEEEEccC
Q 010754 431 KYVHDLREHSKEIYTIRWSPT 451 (502)
Q Consensus 431 ~~~~~~~~h~~~i~~v~~sp~ 451 (502)
.....+..+.+.+...+|+|-
T Consensus 408 ~~~~~l~~~~g~~~~p~ws~~ 428 (430)
T PRK00178 408 RVRLPLPTAQGEVREPSWSPY 428 (430)
T ss_pred CceEECcCCCCCcCCCccCCC
Confidence 444455555667888889884
No 227
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.49 E-value=6.2e-12 Score=125.02 Aligned_cols=191 Identities=14% Similarity=0.162 Sum_probs=126.8
Q ss_pred CCCeEEEEECCCCCEEEEEECC---CeEEEEECCCceEEEecCccCCeEEEEEecCCCEEE-EEecCCeEEEEE--cCCC
Q 010754 274 SKDVTTLDWNGEGTLLATGSYD---GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLL-TGSCDKTAIVWD--VKTE 347 (502)
Q Consensus 274 ~~~v~~l~~s~~g~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-s~~~d~~i~~wd--~~~~ 347 (502)
...+.+.+|+|||+.|+..+.. ..|.+||+.+.....+....+.+.+..|+|+|+.|+ +.+.++...||. +.++
T Consensus 195 ~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~ 274 (427)
T PRK02889 195 PEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGS 274 (427)
T ss_pred CCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEEccCCCceEEEEECCCC
Confidence 4568899999999999887753 369999998665555555556677899999999887 566777766664 4444
Q ss_pred ceEEEEeeccCCeEEEEecCCCE-EEEEeC-CCeEEEEE--cCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCC---
Q 010754 348 EWKQQFEFHSGPTLDVDWRNNVS-FATSST-DNMIYVCK--IGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDV--- 420 (502)
Q Consensus 348 ~~~~~~~~~~~~v~~v~~~~~~~-~~~~~~-d~~i~i~d--~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg--- 420 (502)
. ...+..+........|++++. ++..+. ++...+|. +.++.. ..+..+........|+|+|++|+..+.++
T Consensus 275 ~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~-~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~ 352 (427)
T PRK02889 275 G-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAA-QRVTFTGSYNTSPRISPDGKLLAYISRVGGAF 352 (427)
T ss_pred C-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCce-EEEecCCCCcCceEECCCCCEEEEEEccCCcE
Confidence 4 344444455566788988765 444443 45555554 444443 22222333445688999999998877654
Q ss_pred cEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecC-ceEEEE
Q 010754 421 TAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIP-YFLYWI 475 (502)
Q Consensus 421 ~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~-~~~iw~ 475 (502)
.|.+||+.+++.. .+.. ........|+|||+ .++.++..+ ...++.
T Consensus 353 ~I~v~d~~~g~~~-~lt~-~~~~~~p~~spdg~-------~l~~~~~~~g~~~l~~ 399 (427)
T PRK02889 353 KLYVQDLATGQVT-ALTD-TTRDESPSFAPNGR-------YILYATQQGGRSVLAA 399 (427)
T ss_pred EEEEEECCCCCeE-EccC-CCCccCceECCCCC-------EEEEEEecCCCEEEEE
Confidence 5999999887754 3332 23356789999998 666666543 333444
No 228
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.49 E-value=2e-11 Score=121.23 Aligned_cols=193 Identities=13% Similarity=0.131 Sum_probs=131.5
Q ss_pred CCCeEEEEECCCCCEEEEEEC---CCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEE-ecCC--eEEEEEcCCC
Q 010754 274 SKDVTTLDWNGEGTLLATGSY---DGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTG-SCDK--TAIVWDVKTE 347 (502)
Q Consensus 274 ~~~v~~l~~s~~g~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~-~~d~--~i~~wd~~~~ 347 (502)
...+.+.+|+|||+.|+..+. +..|.+|++.+.....+....+.+..+.|+|+|+.|+.. +.+| .|++||+.++
T Consensus 198 ~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg 277 (429)
T PRK03629 198 PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASG 277 (429)
T ss_pred CCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCC
Confidence 346899999999999887653 357999998866555555455556678999999988854 4444 5999999888
Q ss_pred ceEEEEeeccCCeEEEEecCCCE-EEEEeCC-C--eEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCC---C
Q 010754 348 EWKQQFEFHSGPTLDVDWRNNVS-FATSSTD-N--MIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD---V 420 (502)
Q Consensus 348 ~~~~~~~~~~~~v~~v~~~~~~~-~~~~~~d-~--~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~d---g 420 (502)
...+. ..+...+....|+|++. ++..+.+ + .|+++++.++.. ..+..+........|+|+|++|+..+.+ .
T Consensus 278 ~~~~l-t~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~ 355 (429)
T PRK03629 278 QIRQV-TDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQ 355 (429)
T ss_pred CEEEc-cCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCe-EEeecCCCCccCEEECCCCCEEEEEEccCCCc
Confidence 76543 33445677889988765 5555543 3 455567766544 3444444556678999999999876653 3
Q ss_pred cEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCce-EEEEee
Q 010754 421 TAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYF-LYWICS 477 (502)
Q Consensus 421 ~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~-~iw~~~ 477 (502)
.|.+||+.+++.. .+... .......|+|||. .++.++.++.. .++..+
T Consensus 356 ~I~~~dl~~g~~~-~Lt~~-~~~~~p~~SpDG~-------~i~~~s~~~~~~~l~~~~ 404 (429)
T PRK03629 356 HIAKQDLATGGVQ-VLTDT-FLDETPSIAPNGT-------MVIYSSSQGMGSVLNLVS 404 (429)
T ss_pred eEEEEECCCCCeE-EeCCC-CCCCCceECCCCC-------EEEEEEcCCCceEEEEEE
Confidence 5889999887643 33321 2245678999998 67777766543 344433
No 229
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.48 E-value=4e-12 Score=115.11 Aligned_cols=206 Identities=17% Similarity=0.223 Sum_probs=152.5
Q ss_pred ceEEec-cCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC
Q 010754 207 DVTILE-GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 207 ~~~~l~-~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~ 285 (502)
++.+.. .|...|+|++|+.....|++|..+++|.+.|+++.+.+. +.. .....+.|+.|..+|.
T Consensus 96 PI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~----------V~~-----~~~~~~~VY~m~~~P~ 160 (609)
T KOG4227|consen 96 PIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIY----------VAN-----ENNNRGDVYHMDQHPT 160 (609)
T ss_pred CceeccCccccceEEEEEccCCeeEecCCCcceeEeeecccceeee----------eec-----ccCcccceeecccCCC
Confidence 344433 356899999999988999999999999999999876432 111 1122458999999999
Q ss_pred CCEEEEEECCCeEEEEECCCce----EEEecCccCCeEEEEEecCC-CEEEEEecCCeEEEEEcCCCc------------
Q 010754 286 GTLLATGSYDGQARIWSTNGDL----KCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEE------------ 348 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~~v~~l~~~~~~-~~l~s~~~d~~i~~wd~~~~~------------ 348 (502)
.+.|++.+.+|.|.+||.+... ...+.........+.|+|.. .+|++.+..+-+-+||.+...
T Consensus 161 DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L 240 (609)
T KOG4227|consen 161 DNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGL 240 (609)
T ss_pred CceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCceeEEeccccCCCCceeeccccchHHhhhccccC
Confidence 9999999999999999976432 22333445667888899865 566778888889999875321
Q ss_pred --------------------------eEEEEeecc------------------CCeEEEEecCCCEEEEEeCCCeEEEEE
Q 010754 349 --------------------------WKQQFEFHS------------------GPTLDVDWRNNVSFATSSTDNMIYVCK 384 (502)
Q Consensus 349 --------------------------~~~~~~~~~------------------~~v~~v~~~~~~~~~~~~~d~~i~i~d 384 (502)
+..-|..|. ..+.+++|..+..+++|+.+-.|++|.
T Consensus 241 ~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~N~~GY~N~~T~KS~~F~~D~~v~tGSD~~~i~~Wk 320 (609)
T KOG4227|consen 241 PQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDHNPNGYCNIKTIKSMTFIDDYTVATGSDHWGIHIWK 320 (609)
T ss_pred cccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEeccCCCCcceeeeeeeeeeeecceeeeccCcccceEEEe
Confidence 000011111 124556777777799999999999999
Q ss_pred cCCC-----------------------cceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 010754 385 IGEN-----------------------RPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNM 427 (502)
Q Consensus 385 ~~~~-----------------------~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~ 427 (502)
+... +.+..++||..-++.+.|+|...+|++.+-...++||.-
T Consensus 321 lP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~~~KlWS~ 386 (609)
T KOG4227|consen 321 LPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQHNNLLVSSGVENSFKLWSD 386 (609)
T ss_pred cCCCccccCccccCcchhhCchhheecceeEEEecccccccceeecCCcceEeccchhhheecccc
Confidence 8531 234678899999999999999999999999999999974
No 230
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.47 E-value=1.6e-11 Score=122.55 Aligned_cols=221 Identities=16% Similarity=0.248 Sum_probs=147.3
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCC---CcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEEC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGD---STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN 283 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~d---g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s 283 (502)
..+.+..+...+...+|+|+|++|+.++.+ ..|++|++.++... .+. .+...+.+++|+
T Consensus 181 ~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~-----------~~~-------~~~~~~~~~~~s 242 (417)
T TIGR02800 181 NPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQRE-----------KVA-------SFPGMNGAPAFS 242 (417)
T ss_pred CCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEE-----------Eee-------cCCCCccceEEC
Confidence 345666677789999999999999887654 47999999876421 000 112345678999
Q ss_pred CCCCEEEEE-ECCC--eEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecC-C--eEEEEEcCCCceEEEEeecc
Q 010754 284 GEGTLLATG-SYDG--QARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD-K--TAIVWDVKTEEWKQQFEFHS 357 (502)
Q Consensus 284 ~~g~~l~s~-~~dg--~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d-~--~i~~wd~~~~~~~~~~~~~~ 357 (502)
|+|+.|+.. +.++ .|++|++.+.....+..+........|+|+|+.|+.++.. + .|+++|+.+++.. .+..+.
T Consensus 243 pDg~~l~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~-~l~~~~ 321 (417)
T TIGR02800 243 PDGSKLAVSLSKDGNPDIYVMDLDGKQLTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVR-RLTFRG 321 (417)
T ss_pred CCCCEEEEEECCCCCccEEEEECCCCCEEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEE-EeecCC
Confidence 999977644 4444 5888898876666666666666678999999988766543 3 6888888877643 344455
Q ss_pred CCeEEEEecCCCE-EEEEeCCC---eEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCC---cEEEEECCCC
Q 010754 358 GPTLDVDWRNNVS-FATSSTDN---MIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDV---TAKIWNMKQD 430 (502)
Q Consensus 358 ~~v~~v~~~~~~~-~~~~~~d~---~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg---~i~iwd~~~~ 430 (502)
.....+.|++++. ++.++.++ .|.+||+.++.. ..+... .......|+|+|++|+..+.++ .+++.+. .+
T Consensus 322 ~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~-~~l~~~-~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~-~g 398 (417)
T TIGR02800 322 GYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGE-RVLTDT-GLDESPSFAPNGRMILYATTRGGRGVLGLVST-DG 398 (417)
T ss_pred CCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCe-EEccCC-CCCCCceECCCCCEEEEEEeCCCcEEEEEEEC-CC
Confidence 5667788887654 55555554 789999887543 333322 2345568999999988877654 3555553 34
Q ss_pred eeEEEeccCCCcEEEEEEc
Q 010754 431 KYVHDLREHSKEIYTIRWS 449 (502)
Q Consensus 431 ~~~~~~~~h~~~i~~v~~s 449 (502)
+....+..+.+.+..++|+
T Consensus 399 ~~~~~~~~~~g~~~~~~ws 417 (417)
T TIGR02800 399 RFRARLPLGNGDVREPAWS 417 (417)
T ss_pred ceeeECCCCCCCcCCCCCC
Confidence 4455555444555555553
No 231
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.45 E-value=3.2e-12 Score=129.34 Aligned_cols=199 Identities=17% Similarity=0.203 Sum_probs=157.5
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECC
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 295 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~d 295 (502)
+.|....+.-+...++.++.+..+-+||...+......+......+ ....-+-++++.-++++|+--
T Consensus 88 ~wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l-------------~~~~~~g~s~~~~~i~~gsv~ 154 (967)
T KOG0974|consen 88 DWIFGAKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTL-------------YSSLIIGDSAEELYIASGSVF 154 (967)
T ss_pred ccccccchhhhcceEEEEEcCceEEEEecccCceehhcCCCceEEE-------------EeEEEEeccCcEEEEEecccc
Confidence 3344455555677888888889999999887654443333221111 113334456677799999999
Q ss_pred CeEEEEECCCce-EEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEE-EEeeccCCeEEEEecCCCEEEE
Q 010754 296 GQARIWSTNGDL-KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQ-QFEFHSGPTLDVDWRNNVSFAT 373 (502)
Q Consensus 296 g~i~iwd~~~~~-~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~-~~~~~~~~v~~v~~~~~~~~~~ 373 (502)
+.|.+|+..... ...+.+|.+.|..+.|+.+|.+++++|.|+++++|++.+.+... ...+|...+..+++.++ .+++
T Consensus 155 ~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n-~i~t 233 (967)
T KOG0974|consen 155 GEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN-RIIT 233 (967)
T ss_pred ccEEEEeccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc-eeEE
Confidence 999999966332 23588999999999999999999999999999999999988776 66789999999999999 9999
Q ss_pred EeCCCeEEEEEcCCCcceEEEecCC-CcEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 010754 374 SSTDNMIYVCKIGENRPIKTFAGHQ-GEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ 429 (502)
Q Consensus 374 ~~~d~~i~i~d~~~~~~~~~~~~h~-~~i~~l~~sp~g~~las~s~dg~i~iwd~~~ 429 (502)
++.|-+.++|+... ..+..+.+|. ..|..++..++...++|++.||.+++|++..
T Consensus 234 ~gedctcrvW~~~~-~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 234 VGEDCTCRVWGVNG-TQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG 289 (967)
T ss_pred eccceEEEEEeccc-ceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence 99999999996644 4455788885 4699999999999999999999999999754
No 232
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.45 E-value=4.4e-12 Score=113.14 Aligned_cols=246 Identities=17% Similarity=0.239 Sum_probs=164.8
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCcc-----CCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC--E
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSN-----GGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT--L 288 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~--~ 288 (502)
+-|.++.|...|.+||||..+|.|.++.-...... ..++.+....-.++ .......|..+.|.++++ .
T Consensus 26 diis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLk-----SleieEKinkIrw~~~~n~a~ 100 (433)
T KOG1354|consen 26 DIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLK-----SLEIEEKINKIRWLDDGNLAE 100 (433)
T ss_pred cceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhh-----hhhhhhhhhhceecCCCCccE
Confidence 55889999999999999999999999976543210 00111110000000 011234689999998664 6
Q ss_pred EEEEECCCeEEEEECCCceE------------------------------------E-EecCccCCeEEEEEecCCCEEE
Q 010754 289 LATGSYDGQARIWSTNGDLK------------------------------------C-TLSKHKGPIFSLKWNKKGDYLL 331 (502)
Q Consensus 289 l~s~~~dg~i~iwd~~~~~~------------------------------------~-~~~~~~~~v~~l~~~~~~~~l~ 331 (502)
++..+.|.+|++|.+..+.. . --..|.--|.++.++.++..++
T Consensus 101 FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~l 180 (433)
T KOG1354|consen 101 FLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFL 180 (433)
T ss_pred EEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEe
Confidence 77788899999997532100 0 0124777799999999998888
Q ss_pred EEecCCeEEEEEcCCCc-eEEEE--eec-----cCCeEEEEecC--CCEEEEEeCCCeEEEEEcCCCcc----eEEEe--
Q 010754 332 TGSCDKTAIVWDVKTEE-WKQQF--EFH-----SGPTLDVDWRN--NVSFATSSTDNMIYVCKIGENRP----IKTFA-- 395 (502)
Q Consensus 332 s~~~d~~i~~wd~~~~~-~~~~~--~~~-----~~~v~~v~~~~--~~~~~~~~~d~~i~i~d~~~~~~----~~~~~-- 395 (502)
++ .|=.|.+|++.--. ..... ..+ ...|++..|+| .+.|+-++..|+|+++|++.... .+.|.
T Consensus 181 SA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEep 259 (433)
T KOG1354|consen 181 SA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEP 259 (433)
T ss_pred ec-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccc
Confidence 76 57789999985332 11111 111 22467777877 46689999999999999995421 11111
Q ss_pred ----------cCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEC-CCCeeEEEeccCCC------------c---EEEEEEc
Q 010754 396 ----------GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNM-KQDKYVHDLREHSK------------E---IYTIRWS 449 (502)
Q Consensus 396 ----------~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~-~~~~~~~~~~~h~~------------~---i~~v~~s 449 (502)
+--..|..+.|+++|+|+++-+.- +|++||+ ...+++.++..|.. . -..++|+
T Consensus 260 edp~~rsffseiIsSISDvKFs~sGryilsRDyl-tvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~s 338 (433)
T KOG1354|consen 260 EDPSSRSFFSEIISSISDVKFSHSGRYILSRDYL-TVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWS 338 (433)
T ss_pred cCCcchhhHHHHhhhhhceEEccCCcEEEEeccc-eeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEc
Confidence 122468889999999999987654 7999999 44556666655531 1 2457899
Q ss_pred cCCCCCCCCCccEEEEeecCceEEEE
Q 010754 450 PTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 450 p~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
-++. .+++|+....++++.
T Consensus 339 g~~~-------~v~TGsy~n~frvf~ 357 (433)
T KOG1354|consen 339 GNDS-------YVMTGSYNNVFRVFN 357 (433)
T ss_pred CCcc-------eEecccccceEEEec
Confidence 8887 778888888888876
No 233
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.44 E-value=3.2e-11 Score=120.28 Aligned_cols=222 Identities=14% Similarity=0.153 Sum_probs=144.3
Q ss_pred eEEeccCCCceEEEEEcCCCCeEEEEeCC-C--cEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC
Q 010754 208 VTILEGHTSEVCACAWSPAGSLLASGSGD-S--TARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 284 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~l~sgs~d-g--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~ 284 (502)
.+.+..+...+.+..|+|||+.|+..+.+ + .|.+||+.+++.. .+... .......+|+|
T Consensus 210 ~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~-----------~lt~~-------~g~~~~~~wSP 271 (448)
T PRK04792 210 EQMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVRE-----------KVTSF-------PGINGAPRFSP 271 (448)
T ss_pred ceEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeE-----------EecCC-------CCCcCCeeECC
Confidence 35566667788999999999988876543 3 5788888765421 01001 12234679999
Q ss_pred CCCEEEE-EECCCe--EEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEec-CC--eEEEEEcCCCceEEEEeeccC
Q 010754 285 EGTLLAT-GSYDGQ--ARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSC-DK--TAIVWDVKTEEWKQQFEFHSG 358 (502)
Q Consensus 285 ~g~~l~s-~~~dg~--i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~-d~--~i~~wd~~~~~~~~~~~~~~~ 358 (502)
||+.|+. .+.+|. |.+||+.+.....+..+........|+|+|+.|+..+. ++ .|+++|+.+++... +.....
T Consensus 272 DG~~La~~~~~~g~~~Iy~~dl~tg~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~-Lt~~g~ 350 (448)
T PRK04792 272 DGKKLALVLSKDGQPEIYVVDIATKALTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSR-LTFEGE 350 (448)
T ss_pred CCCEEEEEEeCCCCeEEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-EecCCC
Confidence 9997765 455664 77778877766666666666788999999998876553 33 57777887776543 222222
Q ss_pred CeEEEEecCCCE-EEEEeC-CC--eEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCC-C--cEEEEECCCCe
Q 010754 359 PTLDVDWRNNVS-FATSST-DN--MIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD-V--TAKIWNMKQDK 431 (502)
Q Consensus 359 ~v~~v~~~~~~~-~~~~~~-d~--~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~d-g--~i~iwd~~~~~ 431 (502)
......|++++. ++..+. ++ .|.++|+.++... .+... .......|+|+|++|+..+.+ | .+++++. ++.
T Consensus 351 ~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~-~lt~~-~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~-~G~ 427 (448)
T PRK04792 351 QNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQ-VLTST-RLDESPSVAPNGTMVIYSTTYQGKQVLAAVSI-DGR 427 (448)
T ss_pred CCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeE-EccCC-CCCCCceECCCCCEEEEEEecCCceEEEEEEC-CCC
Confidence 334567887654 434333 33 4666787777543 23222 122345799999988776653 3 3777786 566
Q ss_pred eEEEeccCCCcEEEEEEccC
Q 010754 432 YVHDLREHSKEIYTIRWSPT 451 (502)
Q Consensus 432 ~~~~~~~h~~~i~~v~~sp~ 451 (502)
....+..+.+.+...+|+|-
T Consensus 428 ~~~~l~~~~g~~~~p~Wsp~ 447 (448)
T PRK04792 428 FKARLPAGQGEVKSPAWSPF 447 (448)
T ss_pred ceEECcCCCCCcCCCccCCC
Confidence 66777766677888999983
No 234
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.43 E-value=2.6e-11 Score=115.97 Aligned_cols=228 Identities=17% Similarity=0.219 Sum_probs=162.0
Q ss_pred CCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEE--------------------CC
Q 010754 225 PAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW--------------------NG 284 (502)
Q Consensus 225 p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--------------------s~ 284 (502)
|...++|....||.+|||+..+++....+.... .-++..++..| +.
T Consensus 3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~--------------~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~ 68 (541)
T KOG4547|consen 3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIA--------------SLSGTCTYTKWGLSADYSPMKWLSLEKAKKASL 68 (541)
T ss_pred chhheEeecCCCCeEEEEEccCceeeeeeccch--------------hccCcceeEEEEEEeccchHHHHhHHHHhhccC
Confidence 346789999999999999998876543222110 00122233333 12
Q ss_pred CCCEEEEEECCCeEEEEECCCceE-EEe--cCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeE
Q 010754 285 EGTLLATGSYDGQARIWSTNGDLK-CTL--SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL 361 (502)
Q Consensus 285 ~g~~l~s~~~dg~i~iwd~~~~~~-~~~--~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~ 361 (502)
+...++-|...|.|.+|++.+..+ ..+ ..|.+.|.++.++.+-..|.+++.|+.+..|+...+..++.+......+.
T Consensus 69 ~t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~ 148 (541)
T KOG4547|consen 69 DTSMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVS 148 (541)
T ss_pred CceEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccc
Confidence 345788899999999999765443 333 47999999999999999999999999999999999999999999889999
Q ss_pred EEEecCCCE-EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCC-----CCEEEEEe-CCCcEEEEECCCC----
Q 010754 362 DVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT-----GSLLASCS-DDVTAKIWNMKQD---- 430 (502)
Q Consensus 362 ~v~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~-----g~~las~s-~dg~i~iwd~~~~---- 430 (502)
+++.++++. +++ ..+.|.+||+.+.+.+.+|.||.++|+++.|--+ |.++.++. .+..+.+|-+...
T Consensus 149 sl~is~D~~~l~~--as~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~~~kkk 226 (541)
T KOG4547|consen 149 SLCISPDGKILLT--ASRQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEKEDKKK 226 (541)
T ss_pred eEEEcCCCCEEEe--ccceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEcccccc
Confidence 999988854 344 3478999999999999999999999999999877 66666554 4666888876542
Q ss_pred eeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEE
Q 010754 431 KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLY 473 (502)
Q Consensus 431 ~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~i 473 (502)
...+.+....-+++. ++-...+....+.+|+.-....+
T Consensus 227 s~~~sl~~~dipv~~-----ds~~~ed~~~~l~lAst~~~g~v 264 (541)
T KOG4547|consen 227 SLSCSLTVPDIPVTS-----DSGLLEDGTIPLVLASTLIPGIV 264 (541)
T ss_pred hhheeeccCCCCeEe-----ccccccccccceEEeeeccCcee
Confidence 222333322323322 22222233345677776644433
No 235
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.41 E-value=3.2e-11 Score=123.94 Aligned_cols=206 Identities=15% Similarity=0.162 Sum_probs=151.0
Q ss_pred cCccccCCCCeEEEEECCC-CCEEEEEECCCeEEEEECCC--------ceEEEecCccCCeEEEEEecCCCEEEEEecCC
Q 010754 267 KGRTNEKSKDVTTLDWNGE-GTLLATGSYDGQARIWSTNG--------DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDK 337 (502)
Q Consensus 267 ~~~~~~~~~~v~~l~~s~~-g~~l~s~~~dg~i~iwd~~~--------~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~ 337 (502)
..+...|...|..++.++. +.++++|+.||+|++|+... +...++....+.+.++.+.+.++.+++++.||
T Consensus 1041 VAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG 1120 (1431)
T KOG1240|consen 1041 VAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDG 1120 (1431)
T ss_pred eehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCC
Confidence 3455567778888888775 49999999999999999642 12334444678899999999999999999999
Q ss_pred eEEEEEcCCCc-------eEEEEee-ccCCeEEEE-e--cCCC-EEEEEeCCCeEEEEEcCCCcceEEEe--cCCCcEEE
Q 010754 338 TAIVWDVKTEE-------WKQQFEF-HSGPTLDVD-W--RNNV-SFATSSTDNMIYVCKIGENRPIKTFA--GHQGEVNC 403 (502)
Q Consensus 338 ~i~~wd~~~~~-------~~~~~~~-~~~~v~~v~-~--~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~--~h~~~i~~ 403 (502)
.|++.++.-.. +.+.... ..+.+.++. | .... .++.+..-+.|..||++......+++ -..+.|++
T Consensus 1121 ~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTS 1200 (1431)
T KOG1240|consen 1121 SVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTS 1200 (1431)
T ss_pred eEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeE
Confidence 99999986521 1111111 223344443 2 1223 57788888999999999876655443 23578999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEec-cCCCcEEEEEEccCCCCCCCCCccEEEEee--cCceEEEEe
Q 010754 404 VKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR-EHSKEIYTIRWSPTGSGTNNPNQQLILARL--IPYFLYWIC 476 (502)
Q Consensus 404 l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~-~h~~~i~~v~~sp~g~~~~~~~~~l~las~--~~~~~iw~~ 476 (502)
++.+|.++++++|+..|.+-+||++-+.++..+. ++..+|+.+..+|.-+ .+...+.++. .+.+.+|..
T Consensus 1201 i~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~----~~S~~vs~~~~~~nevs~wn~ 1272 (1431)
T KOG1240|consen 1201 IVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYP----QESVSVSAGSSSNNEVSTWNM 1272 (1431)
T ss_pred EEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCC----CCceEEEecccCCCceeeeec
Confidence 9999999999999999999999999999888776 5668899999888754 1224455544 355777753
No 236
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=99.40 E-value=1.4e-12 Score=137.91 Aligned_cols=198 Identities=16% Similarity=0.314 Sum_probs=161.9
Q ss_pred EeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEE
Q 010754 210 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 289 (502)
Q Consensus 210 ~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l 289 (502)
.++.|-..|.++.=+|...+.+||+.||.|++|....+.. +.+.+. .+ ...|+.+.|+.+|+.+
T Consensus 2203 ~~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~----------v~~~rt-----~g-~s~vtr~~f~~qGnk~ 2266 (2439)
T KOG1064|consen 2203 MIKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQ----------VVCFRT-----AG-NSRVTRSRFNHQGNKF 2266 (2439)
T ss_pred EeecccCceeeecCCCCCceEEecCCCceEEEEeccCCCe----------EEEeec-----cC-cchhhhhhhcccCCce
Confidence 4455667899999999999999999999999999877653 222221 12 2679999999999999
Q ss_pred EEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEe---cCCeEEEEEcCC--Cc-eEEEEeeccCCeEEE
Q 010754 290 ATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGS---CDKTAIVWDVKT--EE-WKQQFEFHSGPTLDV 363 (502)
Q Consensus 290 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~---~d~~i~~wd~~~--~~-~~~~~~~~~~~v~~v 363 (502)
..+..||.+.+|....+.......|......+.|-. ..+++++ .++.+.+||..- +. ++. ..|.+.++++
T Consensus 2267 ~i~d~dg~l~l~q~~pk~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~H~~gaT~l 2342 (2439)
T KOG1064|consen 2267 GIVDGDGDLSLWQASPKPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVH--TCHDGGATVL 2342 (2439)
T ss_pred eeeccCCceeecccCCcceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceee--eecCCCceEE
Confidence 999999999999999888888899999999999875 5666654 478999999632 22 333 7799999999
Q ss_pred EecCCCE-EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEec
Q 010754 364 DWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR 437 (502)
Q Consensus 364 ~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~ 437 (502)
.+.|... |++|+.+|.|++||++..+.++++.. ++ ...++++|+..|.|+||++.....++.+.
T Consensus 2343 ~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~---------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p 2407 (2439)
T KOG1064|consen 2343 AYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA---------LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFP 2407 (2439)
T ss_pred EEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh---------hh-hhheeeccCcccceEEEEccccchhhcCc
Confidence 9988755 88999999999999999888877764 44 56789999999999999999988887776
No 237
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.40 E-value=4.8e-13 Score=123.65 Aligned_cols=196 Identities=11% Similarity=0.156 Sum_probs=166.7
Q ss_pred eEEEEECCCCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeec
Q 010754 277 VTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH 356 (502)
Q Consensus 277 v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~ 356 (502)
-..+.++.+|++|+.|+.-|.|-.+|..+..+..-..-...|..+.|-.+.++|+++ ..+.++||| ..|..++.+..+
T Consensus 132 PY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~Etv~Dv~~LHneq~~AVA-QK~y~yvYD-~~GtElHClk~~ 209 (545)
T KOG1272|consen 132 PYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINVMETVRDVTFLHNEQFFAVA-QKKYVYVYD-NNGTELHCLKRH 209 (545)
T ss_pred CeeeeecCCccEEEecCCccceeeeecccceeeeeeehhhhhhhhhhhcchHHHHhh-hhceEEEec-CCCcEEeehhhc
Confidence 577889999999999999999999997765554444456779999998887777665 678999999 456666666543
Q ss_pred cCCeEEEEecCCCE-EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEE
Q 010754 357 SGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD 435 (502)
Q Consensus 357 ~~~v~~v~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~ 435 (502)
..|..+.|.|... +++++..|.+.--|+..|+.+..+..-.+.+..++-+|-.-.+-+|...|+|.+|.-...+++..
T Consensus 210 -~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvK 288 (545)
T KOG1272|consen 210 -IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVK 288 (545)
T ss_pred -CchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHHH
Confidence 4688899988765 66778889999999999999999988888999999999999999999999999999999999988
Q ss_pred eccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEeeeEEEe
Q 010754 436 LREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICSIYFKY 482 (502)
Q Consensus 436 ~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~~~~~ 482 (502)
+..|.++|.+|++.++|. +.++++.|..++||+....+.+
T Consensus 289 iLcH~g~V~siAv~~~G~-------YMaTtG~Dr~~kIWDlR~~~ql 328 (545)
T KOG1272|consen 289 ILCHRGPVSSIAVDRGGR-------YMATTGLDRKVKIWDLRNFYQL 328 (545)
T ss_pred HHhcCCCcceEEECCCCc-------EEeecccccceeEeeecccccc
Confidence 889999999999999999 8888888999999997765533
No 238
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.39 E-value=7.9e-10 Score=106.72 Aligned_cols=242 Identities=13% Similarity=0.132 Sum_probs=147.6
Q ss_pred eEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC
Q 010754 208 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~ 287 (502)
+..+......-..+.|+|||+++++++.||.|.++|+.+.+.+.. ... .....++++++||+
T Consensus 29 ~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~-------------i~~-----G~~~~~i~~s~DG~ 90 (369)
T PF02239_consen 29 VARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVAT-------------IKV-----GGNPRGIAVSPDGK 90 (369)
T ss_dssp EEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEE-------------EE------SSEEEEEEE--TTT
T ss_pred EEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEE-------------Eec-----CCCcceEEEcCCCC
Confidence 455554433334578999999999999999999999998774321 111 23478899999999
Q ss_pred EEEEEE-CCCeEEEEECCC-ceEEEecC-------ccCCeEEEEEecCCCEEEEEec-CCeEEEEEcCCCceEE-EEeec
Q 010754 288 LLATGS-YDGQARIWSTNG-DLKCTLSK-------HKGPIFSLKWNKKGDYLLTGSC-DKTAIVWDVKTEEWKQ-QFEFH 356 (502)
Q Consensus 288 ~l~s~~-~dg~i~iwd~~~-~~~~~~~~-------~~~~v~~l~~~~~~~~l~s~~~-d~~i~~wd~~~~~~~~-~~~~~ 356 (502)
+++++. ..+.+.++|.++ +.+..+.. ....+.++..+|....++..-. .+.|.+.|....+.+. .....
T Consensus 91 ~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~ 170 (369)
T PF02239_consen 91 YVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKV 170 (369)
T ss_dssp EEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE-
T ss_pred EEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeecc
Confidence 998776 579999999764 44444332 2346778888888886666555 4788888876654333 22234
Q ss_pred cCCeEEEEecCCCE-EEE-EeCCCeEEEEEcCCCcceE------------------------------------------
Q 010754 357 SGPTLDVDWRNNVS-FAT-SSTDNMIYVCKIGENRPIK------------------------------------------ 392 (502)
Q Consensus 357 ~~~v~~v~~~~~~~-~~~-~~~d~~i~i~d~~~~~~~~------------------------------------------ 392 (502)
.....+..|.++++ |++ ...++.|-++|..+++.+.
T Consensus 171 g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~ 250 (369)
T PF02239_consen 171 GRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDP 250 (369)
T ss_dssp -TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--T
T ss_pred cccccccccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCCc
Confidence 44567788877654 333 3455667777766654332
Q ss_pred -------------EEecCCCcEEEEEEcCCCCEEEEE----eCCCcEEEEECCCCeeEEEeccC-CCcEEEEEEccCCCC
Q 010754 393 -------------TFAGHQGEVNCVKWDPTGSLLASC----SDDVTAKIWNMKQDKYVHDLREH-SKEIYTIRWSPTGSG 454 (502)
Q Consensus 393 -------------~~~~h~~~i~~l~~sp~g~~las~----s~dg~i~iwd~~~~~~~~~~~~h-~~~i~~v~~sp~g~~ 454 (502)
++....+. ..+..+|+++++... ...++|.++|..+.+.+..+... ...+..+.|+++|.
T Consensus 251 v~v~d~~~wkvv~~I~~~G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~- 328 (369)
T PF02239_consen 251 VSVHDDYAWKVVKTIPTQGGG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGK- 328 (369)
T ss_dssp TT-STTTBTSEEEEEE-SSSS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSS-
T ss_pred cccchhhcCeEEEEEECCCCc-ceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECCCCC-
Confidence 22222222 456779999999988 44589999999999888888633 33599999999998
Q ss_pred CCCCCccEEEEeecCc--eEEEE
Q 010754 455 TNNPNQQLILARLIPY--FLYWI 475 (502)
Q Consensus 455 ~~~~~~~l~las~~~~--~~iw~ 475 (502)
.+.++..+.. +.+++
T Consensus 329 ------~v~vS~~~~~~~i~v~D 345 (369)
T PF02239_consen 329 ------EVWVSVWDGNGAIVVYD 345 (369)
T ss_dssp ------EEEEEEE--TTEEEEEE
T ss_pred ------EEEEEEecCCCEEEEEE
Confidence 6666666644 66664
No 239
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=99.39 E-value=9.3e-11 Score=104.22 Aligned_cols=233 Identities=15% Similarity=0.319 Sum_probs=143.6
Q ss_pred EeccCCCceEEEEEcCCC-CeEEEEeCCCcEEEEecCCCCccCCCC-CCCceeEEE------------ee----------
Q 010754 210 ILEGHTSEVCACAWSPAG-SLLASGSGDSTARIWTIADGTSNGGAQ-NGPLNVLVL------------KH---------- 265 (502)
Q Consensus 210 ~l~~H~~~V~~~~~~p~~-~~l~sgs~dg~v~iw~~~~~~~~~~~~-~~~~~~~~~------------~~---------- 265 (502)
.+.....++..++|||+| .+|.+..-|-.|.+|.+.+.+...... ......+.+ +.
T Consensus 86 kIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c 165 (447)
T KOG4497|consen 86 KIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSC 165 (447)
T ss_pred EeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEecccccCceeEEECCCCceeeeeecccHHHHHHHHhh
Confidence 344556788999999999 567777789999999998754211000 000000000 00
Q ss_pred ----ecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEE
Q 010754 266 ----VKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIV 341 (502)
Q Consensus 266 ----~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~ 341 (502)
+..+....+.+.+.+.|+|||+.|+ +||.--..+.-...-.-.+..+.|+|.+++|++|+.|+.+++
T Consensus 166 ~~W~ll~~f~~dT~DltgieWsPdg~~la---------Vwd~~Leykv~aYe~~lG~k~v~wsP~~qflavGsyD~~lrv 236 (447)
T KOG4497|consen 166 KAWILLKEFKLDTIDLTGIEWSPDGNWLA---------VWDNVLEYKVYAYERGLGLKFVEWSPCNQFLAVGSYDQMLRV 236 (447)
T ss_pred HHHHHHHhcCCCcccccCceECCCCcEEE---------EecchhhheeeeeeeccceeEEEeccccceEEeeccchhhhh
Confidence 0011112233445555555554443 444211111101112246889999999999999999999888
Q ss_pred EEcCCCceEEEE------------------------------------------------------------e------e
Q 010754 342 WDVKTEEWKQQF------------------------------------------------------------E------F 355 (502)
Q Consensus 342 wd~~~~~~~~~~------------------------------------------------------------~------~ 355 (502)
.+--+.+....| + .
T Consensus 237 lnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pn 316 (447)
T KOG4497|consen 237 LNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPN 316 (447)
T ss_pred hceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCC
Confidence 643222111000 0 0
Q ss_pred ccCCeEEEEecCCCEEEEEeCCC---eEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCee
Q 010754 356 HSGPTLDVDWRNNVSFATSSTDN---MIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY 432 (502)
Q Consensus 356 ~~~~v~~v~~~~~~~~~~~~~d~---~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~ 432 (502)
....+..++|+++..+++.-.|+ .+.+||++..+....+. ...+|....|+|....|+.+.....+++|...-..+
T Consensus 317 Pk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLi-Qk~piraf~WdP~~prL~vctg~srLY~W~psg~~~ 395 (447)
T KOG4497|consen 317 PKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLI-QKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPRV 395 (447)
T ss_pred cccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhh-hccceeEEEeCCCCceEEEEcCCceEEEEcCCCceE
Confidence 01124567888888888776665 58999998876544443 457899999999999999888888899999776555
Q ss_pred EEEeccCCCcEEEEEEccCCC
Q 010754 433 VHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 433 ~~~~~~h~~~i~~v~~sp~g~ 453 (502)
+..-. ..-.|..+.|.-+|.
T Consensus 396 V~vP~-~GF~i~~l~W~~~g~ 415 (447)
T KOG4497|consen 396 VGVPK-KGFNIQKLQWLQPGE 415 (447)
T ss_pred EecCC-CCceeeeEEecCCCc
Confidence 44332 334699999999998
No 240
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.37 E-value=2.4e-10 Score=114.08 Aligned_cols=186 Identities=15% Similarity=0.210 Sum_probs=129.9
Q ss_pred CCeEEEEECCCCCEEEEEECC---CeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEE-EecCC--eEEEEEcCCCc
Q 010754 275 KDVTTLDWNGEGTLLATGSYD---GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLT-GSCDK--TAIVWDVKTEE 348 (502)
Q Consensus 275 ~~v~~l~~s~~g~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s-~~~d~--~i~~wd~~~~~ 348 (502)
..+...+|+|+|++|+.++.. ..|++|++.+.....+..+...+.+++|+|+|+.|+. .+.++ .|++||+.++.
T Consensus 190 ~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~ 269 (417)
T TIGR02800 190 EPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQ 269 (417)
T ss_pred CceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEECCCCCccEEEEECCCCC
Confidence 457888999999999988754 4799999886655555566677788999999987764 44444 58899998776
Q ss_pred eEEEEeeccCCeEEEEecCCCE-EEEEeC-CC--eEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCC---c
Q 010754 349 WKQQFEFHSGPTLDVDWRNNVS-FATSST-DN--MIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDV---T 421 (502)
Q Consensus 349 ~~~~~~~~~~~v~~v~~~~~~~-~~~~~~-d~--~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg---~ 421 (502)
... +..+........|++++. ++..+. .+ .|+++++.+++. ..+..+...+..+.|+|+|++|+.++.++ .
T Consensus 270 ~~~-l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~ 347 (417)
T TIGR02800 270 LTR-LTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEV-RRLTFRGGYNASPSWSPDGDLIAFVHREGGGFN 347 (417)
T ss_pred EEE-CCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCE-EEeecCCCCccCeEECCCCCEEEEEEccCCceE
Confidence 433 333444455678877654 554443 22 688888877654 34444556678899999999999888775 7
Q ss_pred EEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCce
Q 010754 422 AKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYF 471 (502)
Q Consensus 422 i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~ 471 (502)
|.+||+.++.. ..+... .......|+|+|. .++.++.++..
T Consensus 348 i~~~d~~~~~~-~~l~~~-~~~~~p~~spdg~-------~l~~~~~~~~~ 388 (417)
T TIGR02800 348 IAVMDLDGGGE-RVLTDT-GLDESPSFAPNGR-------MILYATTRGGR 388 (417)
T ss_pred EEEEeCCCCCe-EEccCC-CCCCCceECCCCC-------EEEEEEeCCCc
Confidence 89999887654 333322 2345668999998 66666665443
No 241
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.36 E-value=4.4e-10 Score=111.29 Aligned_cols=225 Identities=13% Similarity=0.080 Sum_probs=138.5
Q ss_pred eEEeccCCCceEEEEEcCCCCe--E-EEEeCCC--cEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEE
Q 010754 208 VTILEGHTSEVCACAWSPAGSL--L-ASGSGDS--TARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW 282 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~--l-~sgs~dg--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~ 282 (502)
.+.|..+...+..-+|+|||+. + ++...+| .|.+.++.++.... +.. ........+|
T Consensus 177 ~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~-----------lt~-------~~g~~~~p~w 238 (428)
T PRK01029 177 LRPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKK-----------ILA-------LQGNQLMPTF 238 (428)
T ss_pred ceEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceE-----------eec-------CCCCccceEE
Confidence 3445555566778899999874 2 2444444 46666766554210 111 1223456799
Q ss_pred CCCCCEEEEEEC-CC----eEEEEECCC----ceEEEecCccCCeEEEEEecCCCEEEEEe-cCCeEEEE--EcCC-Cce
Q 010754 283 NGEGTLLATGSY-DG----QARIWSTNG----DLKCTLSKHKGPIFSLKWNKKGDYLLTGS-CDKTAIVW--DVKT-EEW 349 (502)
Q Consensus 283 s~~g~~l~s~~~-dg----~i~iwd~~~----~~~~~~~~~~~~v~~l~~~~~~~~l~s~~-~d~~i~~w--d~~~-~~~ 349 (502)
+|||+.|+..+. +| .+.+|++.. ................+|+|+|+.|+..+ .+|...+| ++.. +..
T Consensus 239 SPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~ 318 (428)
T PRK01029 239 SPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQS 318 (428)
T ss_pred CCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccc
Confidence 999998887653 23 334466542 22223323334456789999999887655 46655555 4432 233
Q ss_pred EEEEeeccCCeEEEEecCCCE-EEEEeC---CCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeC---CCcE
Q 010754 350 KQQFEFHSGPTLDVDWRNNVS-FATSST---DNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD---DVTA 422 (502)
Q Consensus 350 ~~~~~~~~~~v~~v~~~~~~~-~~~~~~---d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~---dg~i 422 (502)
...+......+....|+|++. ++..+. ...|++||+.+++... +......+....|+|||++|+..+. ...|
T Consensus 319 ~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~-Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L 397 (428)
T PRK01029 319 PRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQ-LTTSPENKESPSWAIDSLHLVYSAGNSNESEL 397 (428)
T ss_pred eEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEE-ccCCCCCccceEECCCCCEEEEEECCCCCceE
Confidence 444444455667889988775 444433 2469999998887543 3323345678999999998875443 3568
Q ss_pred EEEECCCCeeEEEeccCCCcEEEEEEccCC
Q 010754 423 KIWNMKQDKYVHDLREHSKEIYTIRWSPTG 452 (502)
Q Consensus 423 ~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g 452 (502)
++||+..++..... ...+.+...+|+|-.
T Consensus 398 ~~vdl~~g~~~~Lt-~~~g~~~~p~Ws~~~ 426 (428)
T PRK01029 398 YLISLITKKTRKIV-IGSGEKRFPSWGAFP 426 (428)
T ss_pred EEEECCCCCEEEee-cCCCcccCceecCCC
Confidence 99999887754433 345567788999865
No 242
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.36 E-value=1.8e-10 Score=110.29 Aligned_cols=187 Identities=17% Similarity=0.254 Sum_probs=146.2
Q ss_pred CCCCEEEEEECCCeEEEEECCCc-eEEEecC---ccCCeEEEEEe--------------------cCCCEEEEEecCCeE
Q 010754 284 GEGTLLATGSYDGQARIWSTNGD-LKCTLSK---HKGPIFSLKWN--------------------KKGDYLLTGSCDKTA 339 (502)
Q Consensus 284 ~~g~~l~s~~~dg~i~iwd~~~~-~~~~~~~---~~~~v~~l~~~--------------------~~~~~l~s~~~d~~i 339 (502)
|.+.++|....||.+++|+.... ....+.. -.+..++.+|. .+...++-|...|.|
T Consensus 3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v 82 (541)
T KOG4547|consen 3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSV 82 (541)
T ss_pred chhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccE
Confidence 45678999999999999997643 3333322 23344555552 123467778889999
Q ss_pred EEEEcCCCceEEEEe--eccCCeEEEEecCC-CEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEE
Q 010754 340 IVWDVKTEEWKQQFE--FHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASC 416 (502)
Q Consensus 340 ~~wd~~~~~~~~~~~--~~~~~v~~v~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~ 416 (502)
.+|++..++....+. .|.+.|.++.|..+ +.|.+++.|+.+..|+....+.+..+.+....+.+++.+|||..|+++
T Consensus 83 ~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~a 162 (541)
T KOG4547|consen 83 LLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTA 162 (541)
T ss_pred EEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEec
Confidence 999999999887776 48889999998654 568999999999999999999999999989999999999999999998
Q ss_pred eCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeec--CceEEEE
Q 010754 417 SDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLI--PYFLYWI 475 (502)
Q Consensus 417 s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~--~~~~iw~ 475 (502)
+. .|++||+.+++.+..|.+|.++|.++.|--+=. .. ....+|.+.. ..+.+|.
T Consensus 163 s~--~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~--g~-~G~~vLssa~~~r~i~~w~ 218 (541)
T KOG4547|consen 163 SR--QIKVLDIETKEVVITFTGHGSPVRTLSFTTLID--GI-IGKYVLSSAAAERGITVWV 218 (541)
T ss_pred cc--eEEEEEccCceEEEEecCCCcceEEEEEEEecc--cc-ccceeeeccccccceeEEE
Confidence 75 799999999999999999999999999988711 01 1123554444 4477775
No 243
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.35 E-value=6.7e-11 Score=105.77 Aligned_cols=250 Identities=19% Similarity=0.301 Sum_probs=184.5
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
.++.++||.+.|+....-|...-+++.+.|.++|||--.+...- ..........+++++.++++.
T Consensus 16 ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~---------------wpsI~~~mP~~~~~~~y~~e~ 80 (404)
T KOG1409|consen 16 LLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQY---------------WPSIYHYMPSPCSAMEYVSES 80 (404)
T ss_pred hhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEecccccc---------------CchhhhhCCCCceEeeeeccc
Confidence 45778999999999999998888999999999999964432210 001111224679999999999
Q ss_pred CEEEEEECCCeEEEEECCC-----ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeE
Q 010754 287 TLLATGSYDGQARIWSTNG-----DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL 361 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~~-----~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~ 361 (502)
..|++|-.+|++.=+.+.. ........|...|..+-|+.....+++.+.|..+.---.+.+..+..+..... .+
T Consensus 81 ~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~-~t 159 (404)
T KOG1409|consen 81 RRLYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETP-AS 159 (404)
T ss_pred eEEEEEEecceEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeecc-CC
Confidence 9999999999999887542 33455678999999999999889999999998877655555554443332111 11
Q ss_pred EEEecCCCEEEEEeCCCeEEEEEc--CCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCee-EEEecc
Q 010754 362 DVDWRNNVSFATSSTDNMIYVCKI--GENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY-VHDLRE 438 (502)
Q Consensus 362 ~v~~~~~~~~~~~~~d~~i~i~d~--~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~-~~~~~~ 438 (502)
++.+.-. ....|...|.|.+..+ ..-.++.++.+|.+.+++++|.|...+|.+|..|..+.+||+.-.+- ...+.+
T Consensus 160 ~~~~d~~-~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~g 238 (404)
T KOG1409|consen 160 ALQFDAL-YAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQG 238 (404)
T ss_pred CCceeeE-EEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeecc
Confidence 1111001 2334455566655444 34467889999999999999999999999999999999999865443 356778
Q ss_pred CCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEeeeEE
Q 010754 439 HSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICSIYF 480 (502)
Q Consensus 439 h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~~~ 480 (502)
|...|..+..-+.-. +++.+..|+.+.+|.++...
T Consensus 239 h~~kV~~l~~~~~t~-------~l~S~~edg~i~~w~mn~~r 273 (404)
T KOG1409|consen 239 HNDKVQALSYAQHTR-------QLISCGEDGGIVVWNMNVKR 273 (404)
T ss_pred chhhhhhhhhhhhhe-------eeeeccCCCeEEEEecccee
Confidence 999999888877766 78899999999999876643
No 244
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=99.34 E-value=7.4e-11 Score=114.81 Aligned_cols=229 Identities=17% Similarity=0.327 Sum_probs=167.8
Q ss_pred eEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC
Q 010754 208 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~ 287 (502)
-++|.||.++|.-+.|+...+.|-|...+|.|.+|-+-++.......+ +...+-|.+|+|+.+|.
T Consensus 64 NQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiN---------------nRnKSvV~SmsWn~dG~ 128 (1189)
T KOG2041|consen 64 NQTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEMIN---------------NRNKSVVVSMSWNLDGT 128 (1189)
T ss_pred hhhhccCcceEEEEEeccccccccccCCCceEEEEeeecccHHHHHhh---------------CcCccEEEEEEEcCCCc
Confidence 367999999999999999888999999999999999988764322111 11235699999999999
Q ss_pred EEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC-------ceEEE----Eeec
Q 010754 288 LLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE-------EWKQQ----FEFH 356 (502)
Q Consensus 288 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~-------~~~~~----~~~~ 356 (502)
.++....||.|.+=.++|..+..-.-.......+.|+++...++.+-..|.+.+||.... .+.-. +...
T Consensus 129 kIcIvYeDGavIVGsvdGNRIwgKeLkg~~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~ 208 (1189)
T KOG2041|consen 129 KICIVYEDGAVIVGSVDGNRIWGKELKGQLLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNF 208 (1189)
T ss_pred EEEEEEccCCEEEEeeccceecchhcchheccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCC
Confidence 999999999999888887655433222333457899999999999999999999997532 11111 1112
Q ss_pred cCCeEEEEecC---------CCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCC-------
Q 010754 357 SGPTLDVDWRN---------NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDV------- 420 (502)
Q Consensus 357 ~~~v~~v~~~~---------~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg------- 420 (502)
...+..+.|.. ...|+++-..|.+.+..-.+...-..+. ..-.|..+.|+++|.+||.|+.|.
T Consensus 209 ~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~Pvv~d-tgm~~vgakWnh~G~vLAvcG~~~da~~~~d 287 (1189)
T KOG2041|consen 209 PTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSENDPEPVVVD-TGMKIVGAKWNHNGAVLAVCGNDSDADEPTD 287 (1189)
T ss_pred CccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcCCCCCeEEe-cccEeecceecCCCcEEEEccCcccccCccc
Confidence 23466777742 2358899999988776554433222222 235688999999999999998652
Q ss_pred --cEEEEECCCCeeEEEeccCCCcEEEEEEccCCC
Q 010754 421 --TAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 421 --~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
.|.+|. .-|+.+.+++...+.|++++|--.|-
T Consensus 288 ~n~v~Fys-p~G~i~gtlkvpg~~It~lsWEg~gL 321 (1189)
T KOG2041|consen 288 SNKVHFYS-PYGHIVGTLKVPGSCITGLSWEGTGL 321 (1189)
T ss_pred cceEEEec-cchhheEEEecCCceeeeeEEcCCce
Confidence 455555 44777888888888999999988775
No 245
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.33 E-value=8e-11 Score=111.95 Aligned_cols=197 Identities=18% Similarity=0.222 Sum_probs=144.9
Q ss_pred cCCCCeEEEEECCCCCEE-EEEECCCeEEEEECCCceEE-------------Eec----------------Cc-------
Q 010754 272 EKSKDVTTLDWNGEGTLL-ATGSYDGQARIWSTNGDLKC-------------TLS----------------KH------- 314 (502)
Q Consensus 272 ~~~~~v~~l~~s~~g~~l-~s~~~dg~i~iwd~~~~~~~-------------~~~----------------~~------- 314 (502)
.+...-+.|..+|||+|+ ++|.+--.|++||+..-.+. .+. -|
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G~hy 128 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYGRHY 128 (703)
T ss_pred CCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhcCeee
Confidence 456678899999999975 56677789999997531110 000 01
Q ss_pred ----cCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCC-CEEEEEeCCCeEEEEEcCCCc
Q 010754 315 ----KGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENR 389 (502)
Q Consensus 315 ----~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~-~~~~~~~~d~~i~i~d~~~~~ 389 (502)
...-..|+++.-..-|++++....|+-+++..|..+..|....+.+..|...+. +.+++|+.+|.|-.||.+...
T Consensus 129 ~~RIP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ks 208 (703)
T KOG2321|consen 129 RTRIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKS 208 (703)
T ss_pred eeecCcCCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhh
Confidence 111234555544445666667778999999999999999988899999998775 456667779999999999887
Q ss_pred ceEEEec------CCC-----cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEec-cCCCcEEEEEEccCCCCCCC
Q 010754 390 PIKTFAG------HQG-----EVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR-EHSKEIYTIRWSPTGSGTNN 457 (502)
Q Consensus 390 ~~~~~~~------h~~-----~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~-~h~~~i~~v~~sp~g~~~~~ 457 (502)
.+.++.. |.+ .|+++.|+.+|-.++.|+.+|.|.|||+++.+++..-. +...+|..+.|.+.+.
T Consensus 209 rv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~---- 284 (703)
T KOG2321|consen 209 RVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQ---- 284 (703)
T ss_pred hheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCC----
Confidence 7766643 222 49999999999999999999999999999998875443 4456899999998854
Q ss_pred CCccEEEEeec-CceEEEE
Q 010754 458 PNQQLILARLI-PYFLYWI 475 (502)
Q Consensus 458 ~~~~l~las~~-~~~~iw~ 475 (502)
.-.+.|.| ..++||+
T Consensus 285 ---q~~v~S~Dk~~~kiWd 300 (703)
T KOG2321|consen 285 ---QNKVVSMDKRILKIWD 300 (703)
T ss_pred ---CceEEecchHHhhhcc
Confidence 22344444 6688895
No 246
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.33 E-value=1.2e-09 Score=109.27 Aligned_cols=194 Identities=14% Similarity=0.157 Sum_probs=128.8
Q ss_pred CCCeEEEEECCCCCEEEEEECC---CeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEE-EecCC--eEEEEEcCCC
Q 010754 274 SKDVTTLDWNGEGTLLATGSYD---GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLT-GSCDK--TAIVWDVKTE 347 (502)
Q Consensus 274 ~~~v~~l~~s~~g~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s-~~~d~--~i~~wd~~~~ 347 (502)
...+....|+|||+.|+..+.+ ..|.+|++.+.....+....+.+....|+|+|+.|+. .+.+| .|++||+.++
T Consensus 198 ~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~ 277 (430)
T PRK00178 198 REPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASR 277 (430)
T ss_pred CCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCCCCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCC
Confidence 3468899999999999877644 3688999886655555555556667999999998874 44455 6888899887
Q ss_pred ceEEEEeeccCCeEEEEecCCCE-EEEEeC-C--CeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCC-C--
Q 010754 348 EWKQQFEFHSGPTLDVDWRNNVS-FATSST-D--NMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD-V-- 420 (502)
Q Consensus 348 ~~~~~~~~~~~~v~~v~~~~~~~-~~~~~~-d--~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~d-g-- 420 (502)
.... +..+........|++++. ++..+. + ..|+++++.+++... +...........|+|+|++|+..+.+ +
T Consensus 278 ~~~~-lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~-lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~ 355 (430)
T PRK00178 278 QLSR-VTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAER-VTFVGNYNARPRLSADGKTLVMVHRQDGNF 355 (430)
T ss_pred CeEE-cccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEEccCCce
Confidence 6543 444444566678987654 444443 3 357888887776433 22222334467899999999877653 3
Q ss_pred cEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeec-CceEEEEeee
Q 010754 421 TAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLI-PYFLYWICSI 478 (502)
Q Consensus 421 ~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~-~~~~iw~~~~ 478 (502)
.|.+||+.+++.. .+. +........|+|+|. .++.++.. +...+|..++
T Consensus 356 ~l~~~dl~tg~~~-~lt-~~~~~~~p~~spdg~-------~i~~~~~~~g~~~l~~~~~ 405 (430)
T PRK00178 356 HVAAQDLQRGSVR-ILT-DTSLDESPSVAPNGT-------MLIYATRQQGRGVLMLVSI 405 (430)
T ss_pred EEEEEECCCCCEE-Ecc-CCCCCCCceECCCCC-------EEEEEEecCCceEEEEEEC
Confidence 5888999887643 333 222233568999998 55555543 4455665544
No 247
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.30 E-value=2.4e-09 Score=95.15 Aligned_cols=157 Identities=18% Similarity=0.227 Sum_probs=111.8
Q ss_pred CCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE-
Q 010754 215 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS- 293 (502)
Q Consensus 215 ~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~- 293 (502)
..+|.++.+.++ .|++.- .+.|.||.+.+.-.. +..+.... ....+.+++=+.+..+||.-+
T Consensus 94 ~~~I~~V~l~r~--riVvvl-~~~I~VytF~~n~k~------------l~~~et~~--NPkGlC~~~~~~~k~~LafPg~ 156 (346)
T KOG2111|consen 94 NSEIKAVKLRRD--RIVVVL-ENKIYVYTFPDNPKL------------LHVIETRS--NPKGLCSLCPTSNKSLLAFPGF 156 (346)
T ss_pred ccceeeEEEcCC--eEEEEe-cCeEEEEEcCCChhh------------eeeeeccc--CCCceEeecCCCCceEEEcCCC
Confidence 467888887754 455554 478999999853211 01111111 112244443333444555433
Q ss_pred CCCeEEEEECCCceE---EEecCccCCeEEEEEecCCCEEEEEecCCe-EEEEEcCCCceEEEEeec--cCCeEEEEecC
Q 010754 294 YDGQARIWSTNGDLK---CTLSKHKGPIFSLKWNKKGDYLLTGSCDKT-AIVWDVKTEEWKQQFEFH--SGPTLDVDWRN 367 (502)
Q Consensus 294 ~dg~i~iwd~~~~~~---~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~-i~~wd~~~~~~~~~~~~~--~~~v~~v~~~~ 367 (502)
.-|.|+|-|+..... .....|.+.|.|++.+.+|..++|+|..|+ |+|||..+|..++.+... ...+.+++|++
T Consensus 157 k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp 236 (346)
T KOG2111|consen 157 KTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSP 236 (346)
T ss_pred ccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCC
Confidence 449999999775444 778899999999999999999999999997 789999999999988753 34699999988
Q ss_pred CCE-EEEEeCCCeEEEEEcCCC
Q 010754 368 NVS-FATSSTDNMIYVCKIGEN 388 (502)
Q Consensus 368 ~~~-~~~~~~d~~i~i~d~~~~ 388 (502)
+.. +++++..|+++|+.++..
T Consensus 237 ~~s~LavsSdKgTlHiF~l~~~ 258 (346)
T KOG2111|consen 237 NSSWLAVSSDKGTLHIFSLRDT 258 (346)
T ss_pred CccEEEEEcCCCeEEEEEeecC
Confidence 766 667788899999998764
No 248
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.27 E-value=1.6e-09 Score=107.36 Aligned_cols=195 Identities=14% Similarity=0.173 Sum_probs=123.5
Q ss_pred CeEEEEECCCCCEE---EEEECCC--eEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEec-----CCeEEEEEcC
Q 010754 276 DVTTLDWNGEGTLL---ATGSYDG--QARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSC-----DKTAIVWDVK 345 (502)
Q Consensus 276 ~v~~l~~s~~g~~l---~s~~~dg--~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~-----d~~i~~wd~~ 345 (502)
.+.+-+|+|||+.+ ++...+| .|.+.++.+.....+....+.....+|+|||+.|+..+. +..+.+|++.
T Consensus 186 ~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~ 265 (428)
T PRK01029 186 LSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQGNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLE 265 (428)
T ss_pred CcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCCCCccceEECCCCCEEEEEECCCCCcceeEEEeecc
Confidence 45677999999752 2444444 577778877666666556666778899999998886553 2234457776
Q ss_pred CC---ceEEEEeeccCCeEEEEecCCCE-EEEEe-CCCe--EEEEEcCC-CcceEEEecCCCcEEEEEEcCCCCEEEEEe
Q 010754 346 TE---EWKQQFEFHSGPTLDVDWRNNVS-FATSS-TDNM--IYVCKIGE-NRPIKTFAGHQGEVNCVKWDPTGSLLASCS 417 (502)
Q Consensus 346 ~~---~~~~~~~~~~~~v~~v~~~~~~~-~~~~~-~d~~--i~i~d~~~-~~~~~~~~~h~~~i~~l~~sp~g~~las~s 417 (502)
.+ ...+.............|+|++. ++..+ .+|. |+++++.. +.....+..+...+....|+|||+.|+..+
T Consensus 266 ~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~ 345 (428)
T PRK01029 266 TGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCS 345 (428)
T ss_pred cCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEE
Confidence 53 33333322223446779998865 55444 4554 44445542 233444555556678899999999988766
Q ss_pred CC---CcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEe-ecCceEEEEeee
Q 010754 418 DD---VTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILAR-LIPYFLYWICSI 478 (502)
Q Consensus 418 ~d---g~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las-~~~~~~iw~~~~ 478 (502)
.+ ..|.+||+.+++... +......+....|+|||. .++..+ ..+...+|.+++
T Consensus 346 ~~~g~~~I~v~dl~~g~~~~-Lt~~~~~~~~p~wSpDG~-------~L~f~~~~~g~~~L~~vdl 402 (428)
T PRK01029 346 VIKGVRQICVYDLATGRDYQ-LTTSPENKESPSWAIDSL-------HLVYSAGNSNESELYLISL 402 (428)
T ss_pred cCCCCcEEEEEECCCCCeEE-ccCCCCCccceEECCCCC-------EEEEEECCCCCceEEEEEC
Confidence 53 369999998887643 333334577899999998 444433 334455665443
No 249
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.26 E-value=2.8e-10 Score=115.63 Aligned_cols=190 Identities=16% Similarity=0.163 Sum_probs=147.4
Q ss_pred eEEEEECCCCCEEEEEECCCeEEEEECCCceEEEecCccCC-----eEEEEEecCCCEEEEEecCCeEEEEEcCCCceEE
Q 010754 277 VTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGP-----IFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQ 351 (502)
Q Consensus 277 v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-----v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~ 351 (502)
|....+..+...++.++.+..+.+||.....+..-..+... ..-+-++++.-++++|+.-+.|.+|+........
T Consensus 90 i~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~ 169 (967)
T KOG0974|consen 90 IFGAKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKPI 169 (967)
T ss_pred ccccchhhhcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCCcc
Confidence 33334444567888899999999999775544333333222 1222345566789999999999999987433333
Q ss_pred EEeeccCCeEEEEecC-CCEEEEEeCCCeEEEEEcCCCcceE-EEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 010754 352 QFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIK-TFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ 429 (502)
Q Consensus 352 ~~~~~~~~v~~v~~~~-~~~~~~~~~d~~i~i~d~~~~~~~~-~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~ 429 (502)
.+.+|.+.+.++.|+. +..+++.+.|+++++|++.+.+... +.-+|...|..++|+|+ .++|++.|.+.++|+.+
T Consensus 170 ~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~- 246 (967)
T KOG0974|consen 170 RLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVN- 246 (967)
T ss_pred eecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEecc-
Confidence 5889999999999965 5668999999999999999987765 67789999999999998 99999999999999755
Q ss_pred CeeEEEeccCCC-cEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 430 DKYVHDLREHSK-EIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 430 ~~~~~~~~~h~~-~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
++.+..+.+|.. .|+.++..++.. .++++..|+.+++|+.
T Consensus 247 ~~~l~~y~~h~g~~iw~~~~~~~~~-------~~vT~g~Ds~lk~~~l 287 (967)
T KOG0974|consen 247 GTQLEVYDEHSGKGIWKIAVPIGVI-------IKVTGGNDSTLKLWDL 287 (967)
T ss_pred cceehhhhhhhhcceeEEEEcCCce-------EEEeeccCcchhhhhh
Confidence 455557777754 699999999876 7888999999999963
No 250
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.26 E-value=2.2e-10 Score=102.49 Aligned_cols=214 Identities=14% Similarity=0.231 Sum_probs=149.4
Q ss_pred CceEEEEEcCCC--CeEEEEeCCCcEEEEecCCCCccCC-----CCCCCce-----eE---------EEeeecCccccCC
Q 010754 216 SEVCACAWSPAG--SLLASGSGDSTARIWTIADGTSNGG-----AQNGPLN-----VL---------VLKHVKGRTNEKS 274 (502)
Q Consensus 216 ~~V~~~~~~p~~--~~l~sgs~dg~v~iw~~~~~~~~~~-----~~~~~~~-----~~---------~~~~~~~~~~~~~ 274 (502)
..|..+.|.+++ ..++..+.|.+|++|.+........ ....+.. +. .....+.....|.
T Consensus 85 EKinkIrw~~~~n~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHt 164 (433)
T KOG1354|consen 85 EKINKIRWLDDGNLAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHT 164 (433)
T ss_pred hhhhhceecCCCCccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccce
Confidence 458899999975 4666777899999999876432220 0000000 00 1111122345788
Q ss_pred CCeEEEEECCCCCEEEEEECCCeEEEEECCC--ce--EEEecC-----ccCCeEEEEEecCC-CEEEEEecCCeEEEEEc
Q 010754 275 KDVTTLDWNGEGTLLATGSYDGQARIWSTNG--DL--KCTLSK-----HKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDV 344 (502)
Q Consensus 275 ~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~--~~--~~~~~~-----~~~~v~~l~~~~~~-~~l~s~~~d~~i~~wd~ 344 (502)
..|.++.++.|+..++++. |=.|.+|+++- +. +.-... -..-|++..|+|.. +.|+-.+..|+|++-|+
T Consensus 165 yhiNSIS~NsD~Et~lSAD-dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDm 243 (433)
T KOG1354|consen 165 YHINSISVNSDKETFLSAD-DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDM 243 (433)
T ss_pred eEeeeeeecCccceEeecc-ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeec
Confidence 8899999999999988876 68899998652 21 222222 23468899999954 67778889999999999
Q ss_pred CCCceE----EEE------------eeccCCeEEEEecCCCEEEEEeCCCeEEEEEc-CCCcceEEEecCCC--------
Q 010754 345 KTEEWK----QQF------------EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKI-GENRPIKTFAGHQG-------- 399 (502)
Q Consensus 345 ~~~~~~----~~~------------~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~-~~~~~~~~~~~h~~-------- 399 (502)
+...+. +.| ...-..|.++.|+++++++..-.--+|.+||+ ...+++.++.-|..
T Consensus 244 R~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDyltvk~wD~nme~~pv~t~~vh~~lr~kLc~l 323 (433)
T KOG1354|consen 244 RQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDYLTVKLWDLNMEAKPVETYPVHEYLRSKLCSL 323 (433)
T ss_pred hhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEeccceeEEEeccccCCcceEEeehHhHHHHHHHH
Confidence 854321 111 11223688999999988888777789999999 67788988887742
Q ss_pred ----c---EEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q 010754 400 ----E---VNCVKWDPTGSLLASCSDDVTAKIWNMKQD 430 (502)
Q Consensus 400 ----~---i~~l~~sp~g~~las~s~dg~i~iwd~~~~ 430 (502)
. -..++|+-++.+++|||....+++++...|
T Consensus 324 YEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~~~g 361 (433)
T KOG1354|consen 324 YENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNLARG 361 (433)
T ss_pred hhccchhheeEEEEcCCcceEecccccceEEEecCCCC
Confidence 1 235789999999999999999999996443
No 251
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=99.25 E-value=2e-09 Score=94.59 Aligned_cols=203 Identities=14% Similarity=0.166 Sum_probs=141.6
Q ss_pred CCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC---CCC-EEEEEECCCeEEEEECCCce-EEE
Q 010754 236 DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG---EGT-LLATGSYDGQARIWSTNGDL-KCT 310 (502)
Q Consensus 236 dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~---~g~-~l~s~~~dg~i~iwd~~~~~-~~~ 310 (502)
-|.+.+|++.+.+... ..... ......+..|.|+. +|. .++-+...|.|.++...... ...
T Consensus 45 ~Gkl~Lys~~d~~~~~------l~~~q--------~~dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~ 110 (339)
T KOG0280|consen 45 SGKLHLYSLEDMKLSP------LDTLQ--------CTDTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVH 110 (339)
T ss_pred ccceEEEeecccccCc------cceee--------eecccccceeeeeeccCCccceeeeccccceEEEEeeccceeeee
Confidence 3677888887765432 00000 01134577788864 455 56667778999999755322 222
Q ss_pred ecCc---c---CCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEE--EEeeccCCeEEEEecC--CCEEEEEeCCCeE
Q 010754 311 LSKH---K---GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQ--QFEFHSGPTLDVDWRN--NVSFATSSTDNMI 380 (502)
Q Consensus 311 ~~~~---~---~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~--~~~~~~~~v~~v~~~~--~~~~~~~~~d~~i 380 (502)
+.+- + ....++.|++.+..++++..+|.+.+-+........ ..+.|.-......|+. .+.+.+|+.|+.+
T Consensus 111 L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l 190 (339)
T KOG0280|consen 111 LRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSL 190 (339)
T ss_pred ecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceE
Confidence 2221 1 124678899999999999999999976665554433 6777888888887743 4678999999999
Q ss_pred EEEEcC-CCcceEE-EecCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEECCC-CeeEEEeccCCCcEEEEEEccCCC
Q 010754 381 YVCKIG-ENRPIKT-FAGHQGEVNCVKWDP-TGSLLASCSDDVTAKIWNMKQ-DKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 381 ~i~d~~-~~~~~~~-~~~h~~~i~~l~~sp-~g~~las~s~dg~i~iwd~~~-~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
..||++ .++.+.. .+.|...|.+|.-+| .+.+|++|+.|-.|++||.++ ++++..-. -.+.|+.+.++|.-.
T Consensus 191 ~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~-v~GGVWRi~~~p~~~ 266 (339)
T KOG0280|consen 191 SCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAK-VGGGVWRIKHHPEIF 266 (339)
T ss_pred EEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCc-cccceEEEEecchhh
Confidence 999999 3333333 456888899998876 478999999999999999984 56665443 447899999999765
No 252
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.25 E-value=4.2e-08 Score=94.79 Aligned_cols=241 Identities=13% Similarity=0.205 Sum_probs=154.4
Q ss_pred CceEEEEEcCCCCeEEEEeC----CCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEE
Q 010754 216 SEVCACAWSPAGSLLASGSG----DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLAT 291 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~----dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s 291 (502)
.....++++|++++|.++.. ++.|..|.+....- ....+..... .......++++|++++|++
T Consensus 37 ~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g---------~L~~~~~~~~----~g~~p~~i~~~~~g~~l~v 103 (345)
T PF10282_consen 37 ENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTG---------TLTLLNSVPS----GGSSPCHIAVDPDGRFLYV 103 (345)
T ss_dssp SSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTT---------EEEEEEEEEE----SSSCEEEEEECTTSSEEEE
T ss_pred CCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcc---------eeEEeeeecc----CCCCcEEEEEecCCCEEEE
Confidence 34456889999999988877 46899998876410 0111111110 2345678999999999999
Q ss_pred EEC-CCeEEEEECCC--ceEEE--ec-----------CccCCeEEEEEecCCCEEEEEec-CCeEEEEEcCCCc--eEE-
Q 010754 292 GSY-DGQARIWSTNG--DLKCT--LS-----------KHKGPIFSLKWNKKGDYLLTGSC-DKTAIVWDVKTEE--WKQ- 351 (502)
Q Consensus 292 ~~~-dg~i~iwd~~~--~~~~~--~~-----------~~~~~v~~l~~~~~~~~l~s~~~-d~~i~~wd~~~~~--~~~- 351 (502)
+.+ +|.|.++++.. ..... .. .......++.|+|+++++++... ...|.+|++.... ...
T Consensus 104 any~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~ 183 (345)
T PF10282_consen 104 ANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPV 183 (345)
T ss_dssp EETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEE
T ss_pred EEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEe
Confidence 985 79999999764 22221 11 12244688999999998888654 4589999987654 322
Q ss_pred -EEe-eccCCeEEEEecCCCE--EEEEeCCCeEEEEEcC--CCc--ceEEEecC------CCcEEEEEEcCCCCEEEEEe
Q 010754 352 -QFE-FHSGPTLDVDWRNNVS--FATSSTDNMIYVCKIG--ENR--PIKTFAGH------QGEVNCVKWDPTGSLLASCS 417 (502)
Q Consensus 352 -~~~-~~~~~v~~v~~~~~~~--~~~~~~d~~i~i~d~~--~~~--~~~~~~~h------~~~i~~l~~sp~g~~las~s 417 (502)
.+. ........+.|++++. +++.-.++.|.+|++. .+. .+..+... ......|+++|+|++|.++.
T Consensus 184 ~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsn 263 (345)
T PF10282_consen 184 DSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSN 263 (345)
T ss_dssp EEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEE
T ss_pred eccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEe
Confidence 222 2344578899988754 5566678899999988 332 22222211 12588899999999987665
Q ss_pred -CCCcEEEEECC--CCe--eEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEee-cCceEEEEe
Q 010754 418 -DDVTAKIWNMK--QDK--YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARL-IPYFLYWIC 476 (502)
Q Consensus 418 -~dg~i~iwd~~--~~~--~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~-~~~~~iw~~ 476 (502)
..++|.+|++. +++ .+..+.......+.++++|+|. .|+++.. ++.+.+|..
T Consensus 264 r~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~-------~l~Va~~~s~~v~vf~~ 321 (345)
T PF10282_consen 264 RGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGR-------YLYVANQDSNTVSVFDI 321 (345)
T ss_dssp CTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSS-------EEEEEETTTTEEEEEEE
T ss_pred ccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCC-------EEEEEecCCCeEEEEEE
Confidence 46789999983 233 3344443344579999999998 6665553 456776654
No 253
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.24 E-value=3.8e-09 Score=105.46 Aligned_cols=193 Identities=13% Similarity=0.145 Sum_probs=122.9
Q ss_pred CCCeEEEEECCCCCEEEEEECC-C--eEEEEECCCceEEEecCccCCeEEEEEecCCCEEEE-EecCCe--EEEEEcCCC
Q 010754 274 SKDVTTLDWNGEGTLLATGSYD-G--QARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLT-GSCDKT--AIVWDVKTE 347 (502)
Q Consensus 274 ~~~v~~l~~s~~g~~l~s~~~d-g--~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s-~~~d~~--i~~wd~~~~ 347 (502)
...+.+..|+|||+.|+..+.+ + .|.+||+.+.....+....+......|+|+|+.|+. .+.++. |++||+.++
T Consensus 217 ~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg 296 (448)
T PRK04792 217 PEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATK 296 (448)
T ss_pred CCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCC
Confidence 3468889999999998877543 3 588889876554444444445567899999998875 455664 888898877
Q ss_pred ceEEEEeeccCCeEEEEecCCCE-EEEEe-CC--CeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeC-CC--
Q 010754 348 EWKQQFEFHSGPTLDVDWRNNVS-FATSS-TD--NMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD-DV-- 420 (502)
Q Consensus 348 ~~~~~~~~~~~~v~~v~~~~~~~-~~~~~-~d--~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~-dg-- 420 (502)
+... +..+........|++++. ++..+ .+ ..|+++|+.+++... +..........+|+|+|++|+..+. ++
T Consensus 297 ~~~~-lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~-Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~ 374 (448)
T PRK04792 297 ALTR-ITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSR-LTFEGEQNLGGSITPDGRSMIMVNRTNGKF 374 (448)
T ss_pred CeEE-CccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-EecCCCCCcCeeECCCCCEEEEEEecCCce
Confidence 6543 444445567788988765 43333 23 357777887766433 2222233445789999999877665 34
Q ss_pred cEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeec-CceEEEEee
Q 010754 421 TAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLI-PYFLYWICS 477 (502)
Q Consensus 421 ~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~-~~~~iw~~~ 477 (502)
.|.++|+.+++.. .+... .......|+|+|. .++.++.. +...+|..+
T Consensus 375 ~I~~~dl~~g~~~-~lt~~-~~d~~ps~spdG~-------~I~~~~~~~g~~~l~~~~ 423 (448)
T PRK04792 375 NIARQDLETGAMQ-VLTST-RLDESPSVAPNGT-------MVIYSTTYQGKQVLAAVS 423 (448)
T ss_pred EEEEEECCCCCeE-EccCC-CCCCCceECCCCC-------EEEEEEecCCceEEEEEE
Confidence 4556787777643 33322 1223458999998 55555544 444566543
No 254
>PF08513 LisH: LisH; InterPro: IPR013720 The LisH motif is found in a large number of eukaryotic proteins, from metazoa, fungi and plants that have a wide range of functions. The recently solved structure of the LisH domain in the N-terminal region of LIS1 depicted it as a novel dimerization motif, and that other structural elements are likely to play an important role in dimerisation [, , ]. The LisH (lis homology) domain mediates protein dimerisation and tetramerisation. The LisH domain is found in Sif2, a component of the Set3 complex which is responsible for repressing meiotic genes. It has been shown that the LisH domain helps mediate interaction with components of the Set3 complex []. ; PDB: 2XTE_L 2XTC_B 2XTD_A 1UUJ_B.
Probab=99.24 E-value=2.1e-12 Score=71.88 Aligned_cols=27 Identities=44% Similarity=0.642 Sum_probs=24.7
Q ss_pred chhhHHHHHHHHhcCCcchhhcccccc
Q 010754 7 EELNYLVFRYLQESGLLHSAFVLGYEA 33 (502)
Q Consensus 7 ~evn~li~rYlqE~g~~~sA~~~~~e~ 33 (502)
++||+|||+||+++||.+||.+|.+|+
T Consensus 1 ~~Ln~lI~~YL~~~Gy~~tA~~f~~Ea 27 (27)
T PF08513_consen 1 EELNQLIYDYLVENGYKETAKAFAKEA 27 (27)
T ss_dssp HHHHHHHHHHHHHCT-HHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHCCcHHHHHHHHhcC
Confidence 589999999999999999999999986
No 255
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.20 E-value=1.4e-08 Score=98.02 Aligned_cols=190 Identities=14% Similarity=0.147 Sum_probs=125.5
Q ss_pred EEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCCc-eE
Q 010754 230 LASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD-LK 308 (502)
Q Consensus 230 l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~-~~ 308 (502)
+++-..++.|.+.|..+.+.+. .+... ...-..+.++|||+++++++.||.|.++|+... .+
T Consensus 9 ~V~~~~~~~v~viD~~t~~~~~-------------~i~~~----~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v 71 (369)
T PF02239_consen 9 YVVERGSGSVAVIDGATNKVVA-------------RIPTG----GAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVV 71 (369)
T ss_dssp EEEEGGGTEEEEEETTT-SEEE-------------EEE-S----TTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEE
T ss_pred EEEecCCCEEEEEECCCCeEEE-------------EEcCC----CCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEE
Confidence 3455678999999988765322 11110 111345779999999999999999999998754 44
Q ss_pred EEecCccCCeEEEEEecCCCEEEEEe-cCCeEEEEEcCCCceEEEEeecc-------CCeEEEEecCC-CEEEEEeC-CC
Q 010754 309 CTLSKHKGPIFSLKWNKKGDYLLTGS-CDKTAIVWDVKTEEWKQQFEFHS-------GPTLDVDWRNN-VSFATSST-DN 378 (502)
Q Consensus 309 ~~~~~~~~~v~~l~~~~~~~~l~s~~-~d~~i~~wd~~~~~~~~~~~~~~-------~~v~~v~~~~~-~~~~~~~~-d~ 378 (502)
..+.. .....+++++++|+++++++ ..+.+.++|.++.+.++.+.... ..+..+..++. ..|++.-. .+
T Consensus 72 ~~i~~-G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~ 150 (369)
T PF02239_consen 72 ATIKV-GGNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTG 150 (369)
T ss_dssp EEEE--SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTT
T ss_pred EEEec-CCCcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCC
Confidence 45544 34468899999999998775 58999999999999998876532 24566655544 44666655 48
Q ss_pred eEEEEEcCCCcceE-EEecCCCcEEEEEEcCCCCEEEEE-eCCCcEEEEECCCCeeEEEec
Q 010754 379 MIYVCKIGENRPIK-TFAGHQGEVNCVKWDPTGSLLASC-SDDVTAKIWNMKQDKYVHDLR 437 (502)
Q Consensus 379 ~i~i~d~~~~~~~~-~~~~h~~~i~~l~~sp~g~~las~-s~dg~i~iwd~~~~~~~~~~~ 437 (502)
.|.+.|....+.+. +............|+|++++++.+ ..++.|-++|..+++.+..+.
T Consensus 151 ~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~ 211 (369)
T PF02239_consen 151 EIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALID 211 (369)
T ss_dssp EEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred eEEEEEeccccccceeeecccccccccccCcccceeeecccccceeEEEeeccceEEEEee
Confidence 88888987765443 222244567789999999987665 456789999999998876653
No 256
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=99.18 E-value=2.8e-09 Score=93.64 Aligned_cols=225 Identities=19% Similarity=0.246 Sum_probs=155.6
Q ss_pred CCCceEEEEEcC---CCC-eEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEE
Q 010754 214 HTSEVCACAWSP---AGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 289 (502)
Q Consensus 214 H~~~V~~~~~~p---~~~-~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l 289 (502)
-+..++.+.|.. +|. .|+-+-.+|.|.++......... .++.+..... ......++.|++.+..+
T Consensus 68 dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~----------~L~~ls~~ki-~~~~~lslD~~~~~~~i 136 (339)
T KOG0280|consen 68 DTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSV----------HLRGLSSKKI-SVVEALSLDISTSGTKI 136 (339)
T ss_pred cccccceeeeeeccCCccceeeeccccceEEEEeeccceeee----------eecccchhhh-hheeeeEEEeeccCceE
Confidence 345677778875 344 56667778899998866533211 1111111000 01135688999999999
Q ss_pred EEEECCCeEEEEECC-Cc--eEEEecCccCCeEEEEEecCC-CEEEEEecCCeEEEEEcC-CCceEEE-EeeccCCeEEE
Q 010754 290 ATGSYDGQARIWSTN-GD--LKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVK-TEEWKQQ-FEFHSGPTLDV 363 (502)
Q Consensus 290 ~s~~~dg~i~iwd~~-~~--~~~~~~~~~~~v~~l~~~~~~-~~l~s~~~d~~i~~wd~~-~~~~~~~-~~~~~~~v~~v 363 (502)
+++..+|.+.+-+.. .. ..+....|.-.++..+|+... +.+.+|+.|+.+..||++ .++++.+ ...|...|.+|
T Consensus 137 ~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI 216 (339)
T KOG0280|consen 137 FVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSI 216 (339)
T ss_pred EEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEE
Confidence 999999999955543 32 334778999999999998644 688899999999999999 3444433 45678889999
Q ss_pred EecCC--CEEEEEeCCCeEEEEEcCC-CcceEEEecCCCcEEEEEEcCC--CCEEEEEeCCCcEEEEECCCCe-----eE
Q 010754 364 DWRNN--VSFATSSTDNMIYVCKIGE-NRPIKTFAGHQGEVNCVKWDPT--GSLLASCSDDVTAKIWNMKQDK-----YV 433 (502)
Q Consensus 364 ~~~~~--~~~~~~~~d~~i~i~d~~~-~~~~~~~~~h~~~i~~l~~sp~--g~~las~s~dg~i~iwd~~~~~-----~~ 433 (502)
.-++. ..+++|+-|..|++||.++ ++|+..-. -.+.|..+.++|. +.+|++|-..| .+|-++..+. ..
T Consensus 217 ~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~-v~GGVWRi~~~p~~~~~lL~~CMh~G-~ki~~~~~~~~e~~~~~ 294 (339)
T KOG0280|consen 217 YSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAK-VGGGVWRIKHHPEIFHRLLAACMHNG-AKILDSSDKVLEFQIVL 294 (339)
T ss_pred ecCCCCCceEEEeccccceeeeehhcccCccccCc-cccceEEEEecchhhhHHHHHHHhcC-ceEEEecccccchheee
Confidence 87654 5699999999999999994 56665443 3478999999995 44566666665 6777765432 33
Q ss_pred EEeccCCCcEEEEEEccC
Q 010754 434 HDLREHSKEIYTIRWSPT 451 (502)
Q Consensus 434 ~~~~~h~~~i~~v~~sp~ 451 (502)
...+.|.+-++.-.|...
T Consensus 295 ~s~~~hdSl~YG~DWd~~ 312 (339)
T KOG0280|consen 295 PSDKIHDSLCYGGDWDSK 312 (339)
T ss_pred eccccccceeeccccccc
Confidence 445578877888888443
No 257
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.17 E-value=3.8e-07 Score=88.18 Aligned_cols=226 Identities=13% Similarity=0.201 Sum_probs=142.2
Q ss_pred CceEEEEEcCCCCeEEEEeC-CCcEEEEecCCCCccCCCCCCCceeE-EEee---ecCccccCCCCeEEEEECCCCCEEE
Q 010754 216 SEVCACAWSPAGSLLASGSG-DSTARIWTIADGTSNGGAQNGPLNVL-VLKH---VKGRTNEKSKDVTTLDWNGEGTLLA 290 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~-dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~v~~l~~s~~g~~l~ 290 (502)
.....++++|++++|+++.. +|+|.++++.....+. ... .... -............++.|+|+|++++
T Consensus 87 ~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~-------~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~ 159 (345)
T PF10282_consen 87 SSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLG-------EVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVY 159 (345)
T ss_dssp SCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEE-------EEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEE
T ss_pred CCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccc-------eeeeecccCCCCCcccccccccceeEEECCCCCEEE
Confidence 44567899999999888874 8999999998742111 000 0100 0011112345688999999999988
Q ss_pred EEECC-CeEEEEECCCce--E---EEe-cCccCCeEEEEEecCCCEEEEEe-cCCeEEEEEcC--CCce--EEEEeec--
Q 010754 291 TGSYD-GQARIWSTNGDL--K---CTL-SKHKGPIFSLKWNKKGDYLLTGS-CDKTAIVWDVK--TEEW--KQQFEFH-- 356 (502)
Q Consensus 291 s~~~d-g~i~iwd~~~~~--~---~~~-~~~~~~v~~l~~~~~~~~l~s~~-~d~~i~~wd~~--~~~~--~~~~~~~-- 356 (502)
+.... ..|.+|+++... + ..+ ......-..+.|+|+++++++.. .+++|.++++. ++.. ++.+...
T Consensus 160 v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~ 239 (345)
T PF10282_consen 160 VPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPE 239 (345)
T ss_dssp EEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCET
T ss_pred EEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccc
Confidence 87643 589999876432 2 111 23345568999999999887654 57889999988 4432 2222221
Q ss_pred ----cCCeEEEEecCCCE--EEEEeCCCeEEEEEcCC--C--cceEEEecCCCcEEEEEEcCCCCEEEEEeC-CCcEEEE
Q 010754 357 ----SGPTLDVDWRNNVS--FATSSTDNMIYVCKIGE--N--RPIKTFAGHQGEVNCVKWDPTGSLLASCSD-DVTAKIW 425 (502)
Q Consensus 357 ----~~~v~~v~~~~~~~--~~~~~~d~~i~i~d~~~--~--~~~~~~~~h~~~i~~l~~sp~g~~las~s~-dg~i~iw 425 (502)
......|.+++++. +++....+.|.+|++.. + +.+..+.........++++|+|++|+++.. ++.|.+|
T Consensus 240 ~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf 319 (345)
T PF10282_consen 240 GFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVF 319 (345)
T ss_dssp TSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEE
T ss_pred cccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEE
Confidence 11467888887765 44455678899999943 2 234444444456899999999999988774 6789999
Q ss_pred EC--CCCeeEEEec-cCCCcEEEEEE
Q 010754 426 NM--KQDKYVHDLR-EHSKEIYTIRW 448 (502)
Q Consensus 426 d~--~~~~~~~~~~-~h~~~i~~v~~ 448 (502)
++ .+|.+...-. ..-....||.|
T Consensus 320 ~~d~~tG~l~~~~~~~~~~~p~ci~f 345 (345)
T PF10282_consen 320 DIDPDTGKLTPVGSSVPIPSPVCIVF 345 (345)
T ss_dssp EEETTTTEEEEEEEEEESSSEEEEEE
T ss_pred EEeCCCCcEEEecccccCCCCEEEeC
Confidence 76 5666544332 22334566665
No 258
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=99.15 E-value=1.4e-08 Score=96.83 Aligned_cols=226 Identities=19% Similarity=0.301 Sum_probs=150.1
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC--EEEE-----
Q 010754 219 CACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT--LLAT----- 291 (502)
Q Consensus 219 ~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~--~l~s----- 291 (502)
++..|++|..+.|--. .+.+.+|++.+.+... . .-|...|+.+.+||.+. .+|+
T Consensus 129 W~~qfs~dEsl~arlv-~nev~f~~~~~f~~~~------------~------kl~~~~i~~f~lSpgp~~~~vAvyvPe~ 189 (566)
T KOG2315|consen 129 WVPQFSIDESLAARLV-SNEVQFYDLGSFKTIQ------------H------KLSVSGITMLSLSPGPEPPFVAVYVPEK 189 (566)
T ss_pred cccccccchhhhhhhh-cceEEEEecCCcccee------------e------eeeccceeeEEecCCCCCceEEEEccCC
Confidence 6888998876544332 3679999987633210 0 01245689999998743 3333
Q ss_pred EECCCeEEEEECCCce----EEEecCccCCeEEEEEecCCCEEE-E--EecCC---------eEEEEEcCCCceEEEEee
Q 010754 292 GSYDGQARIWSTNGDL----KCTLSKHKGPIFSLKWNKKGDYLL-T--GSCDK---------TAIVWDVKTEEWKQQFEF 355 (502)
Q Consensus 292 ~~~dg~i~iwd~~~~~----~~~~~~~~~~v~~l~~~~~~~~l~-s--~~~d~---------~i~~wd~~~~~~~~~~~~ 355 (502)
++.-+.|+||...-.. +..-.-....-..+.|++.|+-|+ . ...|. ++++.++....+.-. -.
T Consensus 190 kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~-L~ 268 (566)
T KOG2315|consen 190 KGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVP-LL 268 (566)
T ss_pred CCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEe-cC
Confidence 2334689999854111 111111223335689998886333 2 23343 688888773333322 23
Q ss_pred ccCCeEEEEecCCCE-E--EEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCC---CcEEEEECCC
Q 010754 356 HSGPTLDVDWRNNVS-F--ATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD---VTAKIWNMKQ 429 (502)
Q Consensus 356 ~~~~v~~v~~~~~~~-~--~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~d---g~i~iwd~~~ 429 (502)
..++|.++.|++.+. | +.|-.-.++.|||++. .++..| ..++-+++-|+|.|++|+.++-+ |.|-|||+.+
T Consensus 269 k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~-~~v~df--~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n 345 (566)
T KOG2315|consen 269 KEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRG-KPVFDF--PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPN 345 (566)
T ss_pred CCCCceEEEECCCCCEEEEEEecccceEEEEcCCC-CEeEeC--CCCCccceEECCCCCEEEEeecCCCCCceEEEeccc
Confidence 578999999988763 4 4455677899999864 344444 46778899999999999888764 8899999999
Q ss_pred CeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeec------CceEEEEe
Q 010754 430 DKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLI------PYFLYWIC 476 (502)
Q Consensus 430 ~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~------~~~~iw~~ 476 (502)
.+++..+.... .+-..|+|||+ .+++|+.. +.++||..
T Consensus 346 ~K~i~~~~a~~--tt~~eW~PdGe-------~flTATTaPRlrvdNg~Kiwhy 389 (566)
T KOG2315|consen 346 RKLIAKFKAAN--TTVFEWSPDGE-------YFLTATTAPRLRVDNGIKIWHY 389 (566)
T ss_pred hhhccccccCC--ceEEEEcCCCc-------EEEEEeccccEEecCCeEEEEe
Confidence 99998887544 46789999999 88998886 45777753
No 259
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=99.15 E-value=1.2e-09 Score=100.05 Aligned_cols=163 Identities=15% Similarity=0.143 Sum_probs=113.0
Q ss_pred EEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE---CC
Q 010754 219 CACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS---YD 295 (502)
Q Consensus 219 ~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~---~d 295 (502)
..+..+|.+++||.+..+....++++...... .......+ . ...-+++.|..+......+. ..
T Consensus 66 ~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~----~kl~~~~~---v-------~~~~~ai~~~~~~~sv~v~dkagD~ 131 (390)
T KOG3914|consen 66 ALVLTSDSGRLVAVATSSKQRAVFDYRENPKG----AKLLDVSC---V-------PKRPTAISFIREDTSVLVADKAGDV 131 (390)
T ss_pred cccccCCCceEEEEEeCCCceEEEEEecCCCc----ceeeeEee---c-------ccCcceeeeeeccceEEEEeecCCc
Confidence 34556677777777777777667776554320 00000000 0 11233444444444444443 34
Q ss_pred CeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEE-eeccCCeEEEEecCCCEEEEE
Q 010754 296 GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF-EFHSGPTLDVDWRNNVSFATS 374 (502)
Q Consensus 296 g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~-~~~~~~v~~v~~~~~~~~~~~ 374 (502)
..+.+|...........+|-+.++.++|+||+++|+++..|..|++-....-..+..| .+|..-|..++..++..++++
T Consensus 132 ~~~di~s~~~~~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~~LlS~ 211 (390)
T KOG3914|consen 132 YSFDILSADSGRCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNYLLLSG 211 (390)
T ss_pred eeeeeecccccCcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCceeeec
Confidence 5556666554555566789999999999999999999999999999877655555554 459999999999999999999
Q ss_pred eCCCeEEEEEcCCCcceEEEe
Q 010754 375 STDNMIYVCKIGENRPIKTFA 395 (502)
Q Consensus 375 ~~d~~i~i~d~~~~~~~~~~~ 395 (502)
+.|+++++||+.+++.+.++.
T Consensus 212 sGD~tlr~Wd~~sgk~L~t~d 232 (390)
T KOG3914|consen 212 SGDKTLRLWDITSGKLLDTCD 232 (390)
T ss_pred CCCCcEEEEecccCCcccccc
Confidence 999999999999999886654
No 260
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=99.14 E-value=2.2e-09 Score=104.77 Aligned_cols=234 Identities=16% Similarity=0.268 Sum_probs=160.1
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECC
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 295 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~d 295 (502)
....|++|+....++|+|+.||.+++..+.+......... +.....-.......+|+..|.-+.|+.+.+.|-+...+
T Consensus 15 vkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~g--laa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~ 92 (1189)
T KOG2041|consen 15 VKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSG--LAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTS 92 (1189)
T ss_pred ceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccc--cccccccchhhhhccCcceEEEEEeccccccccccCCC
Confidence 3467999999999999999999999999987643222111 11111112345567889999999999999999999999
Q ss_pred CeEEEEECCCceE---EEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCE-E
Q 010754 296 GQARIWSTNGDLK---CTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS-F 371 (502)
Q Consensus 296 g~i~iwd~~~~~~---~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~ 371 (502)
|.|.+|-+-.... ..-...++.|.+++|+.+|..+.....||.|.+=.+...+. ..-.........+.|+++.. +
T Consensus 93 GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRI-wgKeLkg~~l~hv~ws~D~~~~ 171 (1189)
T KOG2041|consen 93 GLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRI-WGKELKGQLLAHVLWSEDLEQA 171 (1189)
T ss_pred ceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeecccee-cchhcchheccceeecccHHHH
Confidence 9999998542211 12234567799999999999999999999999887754432 11112222345788988765 4
Q ss_pred EEEeCCCeEEEEEcCCCc-------c-e---EEEecCCCcEEEEEEc--------CCCCEEEEEeCCCcEEEEECCCCee
Q 010754 372 ATSSTDNMIYVCKIGENR-------P-I---KTFAGHQGEVNCVKWD--------PTGSLLASCSDDVTAKIWNMKQDKY 432 (502)
Q Consensus 372 ~~~~~d~~i~i~d~~~~~-------~-~---~~~~~h~~~i~~l~~s--------p~g~~las~s~dg~i~iwd~~~~~~ 432 (502)
+.+-..|.+.+||...+- + + ..+......|..+.|. |+...||.|-..|.+.|-.-.+...
T Consensus 172 Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~ 251 (1189)
T KOG2041|consen 172 LFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSENDPE 251 (1189)
T ss_pred HhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcCCCC
Confidence 455677899999976431 1 1 1111112235566664 4778999999999998876544332
Q ss_pred EEEeccCCCcEEEEEEccCCC
Q 010754 433 VHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 433 ~~~~~~h~~~i~~v~~sp~g~ 453 (502)
...+. ....|..+.|+|+|.
T Consensus 252 Pvv~d-tgm~~vgakWnh~G~ 271 (1189)
T KOG2041|consen 252 PVVVD-TGMKIVGAKWNHNGA 271 (1189)
T ss_pred CeEEe-cccEeecceecCCCc
Confidence 22332 235689999999998
No 261
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=99.13 E-value=3.8e-08 Score=105.46 Aligned_cols=236 Identities=13% Similarity=0.251 Sum_probs=157.3
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCcEEEE----ecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEE
Q 010754 214 HTSEVCACAWSPAGSLLASGSGDSTARIW----TIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 289 (502)
Q Consensus 214 H~~~V~~~~~~p~~~~l~sgs~dg~v~iw----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l 289 (502)
..+.|.++.|-++...++.+..+|.|.+. +..+... ..... -...|.+++||||+.+|
T Consensus 74 ~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~-----------E~VG~-------vd~GI~a~~WSPD~Ell 135 (928)
T PF04762_consen 74 PNDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDEI-----------EIVGS-------VDSGILAASWSPDEELL 135 (928)
T ss_pred CCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCcee-----------EEEEE-------EcCcEEEEEECCCcCEE
Confidence 34678999999999888999999999998 4333221 11111 14579999999999999
Q ss_pred EEEECCCeEEEEECCCce----------------E--------EEecC------------------------ccCCeEEE
Q 010754 290 ATGSYDGQARIWSTNGDL----------------K--------CTLSK------------------------HKGPIFSL 321 (502)
Q Consensus 290 ~s~~~dg~i~iwd~~~~~----------------~--------~~~~~------------------------~~~~v~~l 321 (502)
+..+.+|++.+.+.+-.. + ..|.+ +...-..|
T Consensus 136 a~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~I 215 (928)
T PF04762_consen 136 ALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRI 215 (928)
T ss_pred EEEeCCCEEEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEE
Confidence 999999998887531000 0 00000 22345678
Q ss_pred EEecCCCEEEEEec---C---CeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEEEEeCC----CeEEEEEcCCCcce
Q 010754 322 KWNKKGDYLLTGSC---D---KTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTD----NMIYVCKIGENRPI 391 (502)
Q Consensus 322 ~~~~~~~~l~s~~~---d---~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d----~~i~i~d~~~~~~~ 391 (502)
+|..||.+|++.+. . +.+++|+- .|....+-..-.+--..++|.|.+.++++... ..|.+|.- +|-.-
T Consensus 216 SWRGDG~yFAVss~~~~~~~~R~iRVy~R-eG~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfEr-NGLrh 293 (928)
T PF04762_consen 216 SWRGDGEYFAVSSVEPETGSRRVIRVYSR-EGELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFER-NGLRH 293 (928)
T ss_pred EECCCCcEEEEEEEEcCCCceeEEEEECC-CceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEec-CCcEe
Confidence 99999999998775 2 57999984 46654444433444567899998877766542 45666653 33332
Q ss_pred EEEe----cCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeE--EEec-cCCCcEEEEEEccCCCCCCCCCccEEE
Q 010754 392 KTFA----GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYV--HDLR-EHSKEIYTIRWSPTGSGTNNPNQQLIL 464 (502)
Q Consensus 392 ~~~~----~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~--~~~~-~h~~~i~~v~~sp~g~~~~~~~~~l~l 464 (502)
..|. .....|..+.|++++..||..-.|. |.+|-..+.... +.+. .....+..+.|+|... ..|.+
T Consensus 294 geF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p------~~L~v 366 (928)
T PF04762_consen 294 GEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKP------LRLHV 366 (928)
T ss_pred eeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCC------CEEEE
Confidence 3332 2356799999999999999988665 999998876532 2333 2233455699999865 35667
Q ss_pred EeecCceEEEEe
Q 010754 465 ARLIPYFLYWIC 476 (502)
Q Consensus 465 as~~~~~~iw~~ 476 (502)
.+.++.+..+.+
T Consensus 367 ~t~~g~~~~~~~ 378 (928)
T PF04762_consen 367 LTSNGQYEIYDF 378 (928)
T ss_pred EecCCcEEEEEE
Confidence 777666655443
No 262
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.12 E-value=2.6e-10 Score=106.46 Aligned_cols=211 Identities=18% Similarity=0.233 Sum_probs=156.1
Q ss_pred eEEeccCCCceEEEEEcCC-CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 208 VTILEGHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~-~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
...+..|.++|..++.-|+ ..-|.+++.|+.+.-.|+..+.....+ ..+. .. ....-...+++.+|..
T Consensus 225 t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~--------~cr~--~~-~~~~v~L~~Ia~~P~n 293 (559)
T KOG1334|consen 225 TKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKF--------VCRE--AD-EKERVGLYTIAVDPRN 293 (559)
T ss_pred ceecccccCccceeeecCCCCCcccccccccceeeeeeccCCcccee--------eeec--cC-CccceeeeeEecCCCC
Confidence 3556789999999999996 567999999999999998876532211 1000 00 0001247788888865
Q ss_pred C-EEEEEECCCeEEEEECCC-------ceEEEecC------ccCCeEEEEEecCCCEEEEEecCCeEEEEEcCC--C---
Q 010754 287 T-LLATGSYDGQARIWSTNG-------DLKCTLSK------HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT--E--- 347 (502)
Q Consensus 287 ~-~l~s~~~dg~i~iwd~~~-------~~~~~~~~------~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~--~--- 347 (502)
. .+++|+.|-.+++||... ..+..+.. ..-.|++++|+.++.-|+++-.|-.|+++.-.. |
T Consensus 294 t~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p 373 (559)
T KOG1334|consen 294 TNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEP 373 (559)
T ss_pred ccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCCCC
Confidence 5 899999999999999542 11222222 234699999998888888888999999995322 2
Q ss_pred -------ceEEE-EeeccC--CeEEEEec-C-CCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEE
Q 010754 348 -------EWKQQ-FEFHSG--PTLDVDWR-N-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLAS 415 (502)
Q Consensus 348 -------~~~~~-~~~~~~--~v~~v~~~-~-~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las 415 (502)
..+.. +++|.. .|-.+-|- | ...+++|+.-|.|.||+-.+++.+..+.+-..-|+||.=+|--.+||+
T Consensus 374 ~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAs 453 (559)
T KOG1334|consen 374 DPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLAS 453 (559)
T ss_pred CCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCchhhc
Confidence 22223 666654 47777773 3 456778888899999999999999999887779999999999999999
Q ss_pred EeCCCcEEEEECCC
Q 010754 416 CSDDVTAKIWNMKQ 429 (502)
Q Consensus 416 ~s~dg~i~iwd~~~ 429 (502)
++-|..|+||--.+
T Consensus 454 SGid~DVKIWTP~~ 467 (559)
T KOG1334|consen 454 SGIDHDVKIWTPLT 467 (559)
T ss_pred cCCccceeeecCCc
Confidence 99999999998644
No 263
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=99.12 E-value=1.1e-07 Score=84.04 Aligned_cols=208 Identities=19% Similarity=0.232 Sum_probs=135.1
Q ss_pred EEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEE
Q 010754 221 CAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARI 300 (502)
Q Consensus 221 ~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~i 300 (502)
++.+.+|++||.. .|..|.|-...+.-. . ....... .......=.-++||||+.+||.+...|+|++
T Consensus 3 ~~~~~~Gk~lAi~-qd~~iEiRsa~Ddf~----------s-i~~kcqV-pkD~~PQWRkl~WSpD~tlLa~a~S~G~i~v 69 (282)
T PF15492_consen 3 LALSSDGKLLAIL-QDQCIEIRSAKDDFS----------S-IIGKCQV-PKDPNPQWRKLAWSPDCTLLAYAESTGTIRV 69 (282)
T ss_pred eeecCCCcEEEEE-eccEEEEEeccCCch----------h-eeEEEec-CCCCCchheEEEECCCCcEEEEEcCCCeEEE
Confidence 5667889888876 567777766544311 0 0011111 1112334678999999999999999999999
Q ss_pred EECCCceEEEecCc-------cCCeEEEEEecC------CCEEEEEecCCeEEEEEcCCC-----ceEEEEee---ccCC
Q 010754 301 WSTNGDLKCTLSKH-------KGPIFSLKWNKK------GDYLLTGSCDKTAIVWDVKTE-----EWKQQFEF---HSGP 359 (502)
Q Consensus 301 wd~~~~~~~~~~~~-------~~~v~~l~~~~~------~~~l~s~~~d~~i~~wd~~~~-----~~~~~~~~---~~~~ 359 (502)
||+.+..+..+... ..+|..|.|.+. ...|++...+|.++-|-+..+ +....|.. ....
T Consensus 70 fdl~g~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~G 149 (282)
T PF15492_consen 70 FDLMGSELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHG 149 (282)
T ss_pred EecccceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCc
Confidence 99887665544432 356777777542 225777788888887765332 23344443 3558
Q ss_pred eEEEEecCCCE-EEEEeC-CC----------eEEEEEcCCCcce--------------------------EEE---ecCC
Q 010754 360 TLDVDWRNNVS-FATSST-DN----------MIYVCKIGENRPI--------------------------KTF---AGHQ 398 (502)
Q Consensus 360 v~~v~~~~~~~-~~~~~~-d~----------~i~i~d~~~~~~~--------------------------~~~---~~h~ 398 (502)
|.++.|++... |++|+. .. -+..|.+-++.|- +.+ ....
T Consensus 150 i~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~ 229 (282)
T PF15492_consen 150 INSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQ 229 (282)
T ss_pred eeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCC
Confidence 99999988754 444432 11 3556665443221 011 1124
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCC
Q 010754 399 GEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSK 441 (502)
Q Consensus 399 ~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~ 441 (502)
..|..|..||||++||+...+|.|.+|++.+-++...+..+..
T Consensus 230 d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~eq 272 (282)
T PF15492_consen 230 DGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQDEQ 272 (282)
T ss_pred CceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccchhhC
Confidence 6789999999999999999999999999988777766654433
No 264
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.11 E-value=3.3e-09 Score=93.85 Aligned_cols=245 Identities=16% Similarity=0.265 Sum_probs=157.8
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCc-----cCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC--CE
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTS-----NGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG--TL 288 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g--~~ 288 (502)
+.|+++.|...|.+|++|...|.|.+|.-....- ...++.+....-.++.+ .-...|..+.|..++ ..
T Consensus 27 d~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSl-----eieEKin~I~w~~~t~r~h 101 (460)
T COG5170 27 DKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSL-----EIEEKINAIEWFDDTGRNH 101 (460)
T ss_pred ceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhc-----cHHHHhhheeeecCCCcce
Confidence 5588999999999999999999999998765431 11122222111111111 112358889987654 36
Q ss_pred EEEEECCCeEEEEECCCc-------------------------------------------eEE-EecCccCCeEEEEEe
Q 010754 289 LATGSYDGQARIWSTNGD-------------------------------------------LKC-TLSKHKGPIFSLKWN 324 (502)
Q Consensus 289 l~s~~~dg~i~iwd~~~~-------------------------------------------~~~-~~~~~~~~v~~l~~~ 324 (502)
++..+.|.+|++|.+..+ ..+ ....|.--|.++.|+
T Consensus 102 FLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~N 181 (460)
T COG5170 102 FLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFN 181 (460)
T ss_pred EEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeec
Confidence 777788999999974211 000 113466678899999
Q ss_pred cCCCEEEEEecCCeEEEEEcCCCceE---EEEeec-----cCCeEEEEecCC--CEEEEEeCCCeEEEEEcCCCcc----
Q 010754 325 KKGDYLLTGSCDKTAIVWDVKTEEWK---QQFEFH-----SGPTLDVDWRNN--VSFATSSTDNMIYVCKIGENRP---- 390 (502)
Q Consensus 325 ~~~~~l~s~~~d~~i~~wd~~~~~~~---~~~~~~-----~~~v~~v~~~~~--~~~~~~~~d~~i~i~d~~~~~~---- 390 (502)
.+...++++ .|-.|.+|++.-.... .-+..| ...|++..|+|. ..|.-++..|.|++.|++....
T Consensus 182 sD~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~ 260 (460)
T COG5170 182 SDKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNS 260 (460)
T ss_pred Cchheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCc
Confidence 887777765 5778999987543211 112222 124667777774 5578888999999999985421
Q ss_pred eE------------EEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCC-eeEEEeccCC------------CcE--
Q 010754 391 IK------------TFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD-KYVHDLREHS------------KEI-- 443 (502)
Q Consensus 391 ~~------------~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~-~~~~~~~~h~------------~~i-- 443 (502)
.+ -|.+-...|..+.|+++|+++++-+.- +|+|||++.. .++.++..|. ..|
T Consensus 261 ~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyl-tvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDaifd 339 (460)
T COG5170 261 KKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYL-TVKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDAIFD 339 (460)
T ss_pred hhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccc-eEEEEecccccCCceeechHHHHHHHHHhhhhccceee
Confidence 11 112223568889999999999987764 7999999764 4666664443 123
Q ss_pred -EEEEEccCCCCCCCCCccEEEEeecCceEEE
Q 010754 444 -YTIRWSPTGSGTNNPNQQLILARLIPYFLYW 474 (502)
Q Consensus 444 -~~v~~sp~g~~~~~~~~~l~las~~~~~~iw 474 (502)
..+.||-|.. .+++||.+...-++
T Consensus 340 kFeisfSgd~~-------~v~sgsy~NNfgiy 364 (460)
T COG5170 340 KFEISFSGDDK-------HVLSGSYSNNFGIY 364 (460)
T ss_pred eEEEEecCCcc-------cccccccccceeee
Confidence 3467887766 55666666665555
No 265
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.11 E-value=3.6e-10 Score=110.53 Aligned_cols=244 Identities=20% Similarity=0.332 Sum_probs=176.0
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC--CEEEEEE
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG--TLLATGS 293 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g--~~l~s~~ 293 (502)
+++.++..+|.|+-+|.++.-| +.+-|+...-. ....+.+.. .-.|..+.|+|.. .+-++..
T Consensus 25 ~~~~a~si~p~grdi~lAsr~g-l~i~dld~p~~---------ppr~l~h~t------pw~vad~qws~h~a~~~wiVst 88 (1081)
T KOG0309|consen 25 GGFNAVSINPSGRDIVLASRQG-LYIIDLDDPFT---------PPRWLHHIT------PWQVADVQWSPHPAKPYWIVST 88 (1081)
T ss_pred CcccceeeccccchhhhhhhcC-eEEEeccCCCC---------CceeeeccC------cchhcceecccCCCCceeEEec
Confidence 5678899999999899988866 55667664321 111112111 1246677787743 4555555
Q ss_pred CCCeEEEEECC----CceEEEecCccCCeEEEEEecCC-CEEEEEecCCeEEEEEcCCCc-eEEEEeeccCCeEEEEecC
Q 010754 294 YDGQARIWSTN----GDLKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEE-WKQQFEFHSGPTLDVDWRN 367 (502)
Q Consensus 294 ~dg~i~iwd~~----~~~~~~~~~~~~~v~~l~~~~~~-~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~v~~v~~~~ 367 (502)
....-.+|++. ...-..+.+|...|+.+.|+|+. ..+++++.|-.+..||+++.. ++..+..-...-..|.|.-
T Consensus 89 s~qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwny 168 (1081)
T KOG0309|consen 89 SNQKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNY 168 (1081)
T ss_pred CcchhhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecc
Confidence 56667788854 34455678999999999999966 578899999999999998764 3444444445566778843
Q ss_pred -CCEEEEEeCCCeEEEEEcCCC-cceEEEecCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEECCC---------------
Q 010754 368 -NVSFATSSTDNMIYVCKIGEN-RPIKTFAGHQGEVNCVKWDPT-GSLLASCSDDVTAKIWNMKQ--------------- 429 (502)
Q Consensus 368 -~~~~~~~~~d~~i~i~d~~~~-~~~~~~~~h~~~i~~l~~sp~-g~~las~s~dg~i~iwd~~~--------------- 429 (502)
+..+.+.+..+.|++||.+.+ .++..+++|...|+.+.|..- ...+.+++.||+|+.||..+
T Consensus 169 k~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~pi 248 (1081)
T KOG0309|consen 169 KDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPI 248 (1081)
T ss_pred cCcchhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcc
Confidence 344666677888999999976 578899999999999988753 34678999999999999642
Q ss_pred ----------------------------------------CeeEEEeccCCCcEEEEEEccCCCC---CCCCCccEEEEe
Q 010754 430 ----------------------------------------DKYVHDLREHSKEIYTIRWSPTGSG---TNNPNQQLILAR 466 (502)
Q Consensus 430 ----------------------------------------~~~~~~~~~h~~~i~~v~~sp~g~~---~~~~~~~l~las 466 (502)
.+.++.|.||+..|....|-..+.- -...+-+|++-|
T Consensus 249 w~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWS 328 (1081)
T KOG0309|consen 249 WRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWS 328 (1081)
T ss_pred eeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEee
Confidence 1246777888888888888776652 234567899999
Q ss_pred ecCceEEEE
Q 010754 467 LIPYFLYWI 475 (502)
Q Consensus 467 ~~~~~~iw~ 475 (502)
-|.++++|-
T Consensus 329 kD~~lrlWp 337 (1081)
T KOG0309|consen 329 KDQTLRLWP 337 (1081)
T ss_pred cCCceEeee
Confidence 999999994
No 266
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=99.11 E-value=7.4e-08 Score=103.26 Aligned_cols=255 Identities=16% Similarity=0.301 Sum_probs=162.3
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccC------------------------CCCCCCceeEE--Eeee-
Q 010754 214 HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNG------------------------GAQNGPLNVLV--LKHV- 266 (502)
Q Consensus 214 H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~------------------------~~~~~~~~~~~--~~~~- 266 (502)
-...|.|++||||+.+|+..+.++++.+-+-. ...+. .+++....... .+..
T Consensus 119 vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~-fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~ 197 (928)
T PF04762_consen 119 VDSGILAASWSPDEELLALVTGEGNLLLMTRD-FDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPT 197 (928)
T ss_pred EcCcEEEEEECCCcCEEEEEeCCCEEEEEecc-ceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCC
Confidence 45789999999999999999999998876421 00000 00000000000 0000
Q ss_pred -----cCccccCCCCeEEEEECCCCCEEEEEEC---C---CeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEec
Q 010754 267 -----KGRTNEKSKDVTTLDWNGEGTLLATGSY---D---GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSC 335 (502)
Q Consensus 267 -----~~~~~~~~~~v~~l~~s~~g~~l~s~~~---d---g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~ 335 (502)
..... ....-..++|-.||.++|+.+. . ..|+||+.+|.+..+...-.+--.+++|.|.|++|++...
T Consensus 198 ~~~~d~~~~s-~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~ReG~L~stSE~v~gLe~~l~WrPsG~lIA~~q~ 276 (928)
T PF04762_consen 198 VPKVDEGKLS-WDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSREGELQSTSEPVDGLEGALSWRPSGNLIASSQR 276 (928)
T ss_pred CCccccCccc-cCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCCceEEeccccCCCccCCccCCCCCCEEEEEEE
Confidence 01111 3345678999999999999875 2 4799999998877666666666678999999999998765
Q ss_pred ---CCeEEEEEcCCCceEEEEee----ccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcce--EEEec-CCCcEEEEE
Q 010754 336 ---DKTAIVWDVKTEEWKQQFEF----HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPI--KTFAG-HQGEVNCVK 405 (502)
Q Consensus 336 ---d~~i~~wd~~~~~~~~~~~~----~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~--~~~~~-h~~~i~~l~ 405 (502)
...|.+|. ++|-....|.. ....|..+.|+.+..+++......|.+|-..+-.-. +.+.. ....+..+.
T Consensus 277 ~~~~~~VvFfE-rNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~vqLWt~~NYHWYLKqei~~~~~~~~~~~~ 355 (928)
T PF04762_consen 277 LPDRHDVVFFE-RNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDRVQLWTRSNYHWYLKQEIRFSSSESVNFVK 355 (928)
T ss_pred cCCCcEEEEEe-cCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCCceEEEeeCCEEEEEEEEEccCCCCCCceE
Confidence 34566676 55554444443 345789999988776555555666999998876421 11221 223455699
Q ss_pred EcCCC-CEEEEEeCCCcEEEEEC----CCC--------eeE------------------------EEeccCCCcEEEEEE
Q 010754 406 WDPTG-SLLASCSDDVTAKIWNM----KQD--------KYV------------------------HDLREHSKEIYTIRW 448 (502)
Q Consensus 406 ~sp~g-~~las~s~dg~i~iwd~----~~~--------~~~------------------------~~~~~h~~~i~~v~~ 448 (502)
|+|.. ..|...+.+|.+.++++ ..+ ..+ ..+. ...+|.+++|
T Consensus 356 Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~-~~~~v~~vaf 434 (928)
T PF04762_consen 356 WDPEKPLRLHVLTSNGQYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELE-LPSPVNDVAF 434 (928)
T ss_pred ECCCCCCEEEEEecCCcEEEEEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEc-CCCCcEEEEE
Confidence 99954 34666666566655442 111 001 1111 3467999999
Q ss_pred ccCCCCCCCCCccEEEEeecCceEEEEeeeE
Q 010754 449 SPTGSGTNNPNQQLILARLIPYFLYWICSIY 479 (502)
Q Consensus 449 sp~g~~~~~~~~~l~las~~~~~~iw~~~~~ 479 (502)
++++. .+.+.+.++.+.+|.+...
T Consensus 435 ~~~~~-------~~avl~~d~~l~~~~~~~~ 458 (928)
T PF04762_consen 435 SPSNS-------RFAVLTSDGSLSIYEWDLK 458 (928)
T ss_pred eCCCC-------eEEEEECCCCEEEEEecCC
Confidence 99987 4788888999999986554
No 267
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=99.10 E-value=4.4e-10 Score=119.68 Aligned_cols=182 Identities=15% Similarity=0.253 Sum_probs=145.7
Q ss_pred CCeEEEEECCCCCEEEEEECCCeEEEEECC-CceEEEe-cCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEE
Q 010754 275 KDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTL-SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQ 352 (502)
Q Consensus 275 ~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~-~~~~~~~-~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~ 352 (502)
..|.++.=+|...+.++|+.||.|++|... +..+..+ ......|+.+.|+.+|+.+..+..||.+.+|... .++...
T Consensus 2209 ~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~~s 2287 (2439)
T KOG1064|consen 2209 ENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKPYTS 2287 (2439)
T ss_pred CceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC-Ccceec
Confidence 458888888988999999999999999854 3333322 3344889999999999999999999999999986 566666
Q ss_pred EeeccCCeEEEEecCCCEEEEE---eCCCeEEEEEcCCCc---ceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 010754 353 FEFHSGPTLDVDWRNNVSFATS---STDNMIYVCKIGENR---PIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWN 426 (502)
Q Consensus 353 ~~~~~~~v~~v~~~~~~~~~~~---~~d~~i~i~d~~~~~---~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd 426 (502)
.+.|.....++.|.. ..++++ +.++.+.+||..... .+. ..|.+.++++++-|..++|++|+.+|.|++||
T Consensus 2288 ~qchnk~~~Df~Fi~-s~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~H~~gaT~l~~~P~~qllisggr~G~v~l~D 2364 (2439)
T KOG1064|consen 2288 WQCHNKALSDFRFIG-SLLATAGRSSDNRNVCLWDTLLPPMNSLVH--TCHDGGATVLAYAPKHQLLISGGRKGEVCLFD 2364 (2439)
T ss_pred cccCCccccceeeee-hhhhccccCCCCCcccchhcccCcccceee--eecCCCceEEEEcCcceEEEecCCcCcEEEee
Confidence 777888888888866 344444 357789999975332 233 77999999999999999999999999999999
Q ss_pred CCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 427 MKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 427 ~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
++..++++.++. |. . .+.++++++.|+++||..+
T Consensus 2365 ~rqrql~h~~~~---------~~-~-------~~~f~~~ss~g~ikIw~~s 2398 (2439)
T KOG1064|consen 2365 IRQRQLRHTFQA---------LD-T-------REYFVTGSSEGNIKIWRLS 2398 (2439)
T ss_pred hHHHHHHHHhhh---------hh-h-------hheeeccCcccceEEEEcc
Confidence 999888877764 33 2 2378999999999999643
No 268
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=99.10 E-value=3.5e-08 Score=94.28 Aligned_cols=220 Identities=18% Similarity=0.366 Sum_probs=149.4
Q ss_pred cCCCceEEEEEcCCC--CeEEE-----EeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC
Q 010754 213 GHTSEVCACAWSPAG--SLLAS-----GSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 213 ~H~~~V~~~~~~p~~--~~l~s-----gs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~ 285 (502)
-|...|..+.++|.+ ..+|+ ++.-+.|+||............ .+.+ ...+=..+.|++-
T Consensus 163 l~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a--------~ksF------Fkadkvqm~WN~~ 228 (566)
T KOG2315|consen 163 LSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVA--------NKSF------FKADKVQMKWNKL 228 (566)
T ss_pred eeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhh--------hccc------cccceeEEEeccC
Confidence 467889999999963 34443 3455789999987432211110 0111 1223456789887
Q ss_pred CCE-EEEEE--CC---------CeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEE--EecCCeEEEEEcCCCceEE
Q 010754 286 GTL-LATGS--YD---------GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLT--GSCDKTAIVWDVKTEEWKQ 351 (502)
Q Consensus 286 g~~-l~s~~--~d---------g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s--~~~d~~i~~wd~~~~~~~~ 351 (502)
|+- |+.++ -| .+++++++++.....-..-.++|.+++|+|+++.|++ |-.-..+.|||++. .+
T Consensus 229 gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~-~~-- 305 (566)
T KOG2315|consen 229 GTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRG-KP-- 305 (566)
T ss_pred CceEEEEEEEeecCCCccccccceEEEEEecCceEEEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCCC-CE--
Confidence 763 33332 22 3688888886665555556899999999999987765 44567899999863 33
Q ss_pred EEeeccCCeEEEEecCCCE-EEEEeC---CCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeC------CCc
Q 010754 352 QFEFHSGPTLDVDWRNNVS-FATSST---DNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD------DVT 421 (502)
Q Consensus 352 ~~~~~~~~v~~v~~~~~~~-~~~~~~---d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~------dg~ 421 (502)
.+....++-.++-|+|.+. ++.++. .|.|-+||+.+.+.+.++.... -+-+.|+|||.+|+|++. |+.
T Consensus 306 v~df~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~--tt~~eW~PdGe~flTATTaPRlrvdNg 383 (566)
T KOG2315|consen 306 VFDFPEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAAN--TTVFEWSPDGEYFLTATTAPRLRVDNG 383 (566)
T ss_pred eEeCCCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccCC--ceEEEEcCCCcEEEEEeccccEEecCC
Confidence 3555677888899988665 444544 5789999999988888887544 445789999999998875 678
Q ss_pred EEEEECCCCeeEEEeccCCCcEEEEEEccCCC
Q 010754 422 AKIWNMKQDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 422 i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
++||+.. |..++.-. ..+..+.+.|-|...
T Consensus 384 ~Kiwhyt-G~~l~~~~-f~sEL~qv~W~P~~~ 413 (566)
T KOG2315|consen 384 IKIWHYT-GSLLHEKM-FKSELLQVEWRPFND 413 (566)
T ss_pred eEEEEec-Cceeehhh-hhHhHhheeeeecCC
Confidence 9999964 55554332 222688899997655
No 269
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=99.08 E-value=1e-09 Score=98.34 Aligned_cols=169 Identities=13% Similarity=0.271 Sum_probs=130.4
Q ss_pred EECCC--CCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC----ceEEEEe
Q 010754 281 DWNGE--GTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE----EWKQQFE 354 (502)
Q Consensus 281 ~~s~~--g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~----~~~~~~~ 354 (502)
+|+-+ |-. ++.+.+-.|-+-++.++....+. .++.|.++.|...++.+..|+..|.|..+|++.+ .+.....
T Consensus 218 awSlni~gyh-fs~G~sqqv~L~nvetg~~qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl 295 (425)
T KOG2695|consen 218 AWSLNIMGYH-FSVGLSQQVLLTNVETGHQQSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL 295 (425)
T ss_pred hhhhccceee-ecccccceeEEEEeecccccccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEE
Confidence 56542 334 45566778888898888777776 6788999999998999999999999999999876 3333344
Q ss_pred eccCCeEEEEec--CCCEEEEEeCCCeEEEEEcCCCcc---eEEEecCCCcEEE--EEEcCCCCEEEEEeCCCcEEEEEC
Q 010754 355 FHSGPTLDVDWR--NNVSFATSSTDNMIYVCKIGENRP---IKTFAGHQGEVNC--VKWDPTGSLLASCSDDVTAKIWNM 427 (502)
Q Consensus 355 ~~~~~v~~v~~~--~~~~~~~~~~d~~i~i~d~~~~~~---~~~~~~h~~~i~~--l~~sp~g~~las~s~dg~i~iwd~ 427 (502)
.|...|+++... .+..+++.+.+|+|.+||++--++ +.++.||...-.- +-..+....++++++|...|||.+
T Consensus 296 yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl 375 (425)
T KOG2695|consen 296 YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSL 375 (425)
T ss_pred EcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEec
Confidence 588888888763 466688889999999999997776 8999998653322 334566778889999999999999
Q ss_pred CCCeeEEEeccC----CCcEEEEEEccC
Q 010754 428 KQDKYVHDLREH----SKEIYTIRWSPT 451 (502)
Q Consensus 428 ~~~~~~~~~~~h----~~~i~~v~~sp~ 451 (502)
+.+.++.++.-. +..|.+++|...
T Consensus 376 ~~ghLl~tipf~~s~~e~d~~sv~~~sr 403 (425)
T KOG2695|consen 376 DSGHLLCTIPFPYSASEVDIPSVAFDSR 403 (425)
T ss_pred ccCceeeccCCCCccccccccceehhcc
Confidence 999999888632 334677777654
No 270
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.06 E-value=1.4e-08 Score=91.30 Aligned_cols=160 Identities=16% Similarity=0.282 Sum_probs=107.7
Q ss_pred CCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEE-----
Q 010754 215 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL----- 289 (502)
Q Consensus 215 ~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l----- 289 (502)
..+++++.++++...|+.|-..|++.-+.+...-... .+......|...|..+-|+-.-..+
T Consensus 68 P~~~~~~~y~~e~~~L~vg~~ngtvtefs~sedfnkm-------------~~~r~~~~h~~~v~~~if~~~~e~V~s~~~ 134 (404)
T KOG1409|consen 68 PSPCSAMEYVSESRRLYVGQDNGTVTEFALSEDFNKM-------------TFLKDYLAHQARVSAIVFSLTHEWVLSTGK 134 (404)
T ss_pred CCCceEeeeeccceEEEEEEecceEEEEEhhhhhhhc-------------chhhhhhhhhcceeeEEecCCceeEEEecc
Confidence 4678999999999999999999999888765421000 0111111222223333222222222
Q ss_pred ----------------------------------EEEECCCeEEEEEC---CCceEEEecCccCCeEEEEEecCCCEEEE
Q 010754 290 ----------------------------------ATGSYDGQARIWST---NGDLKCTLSKHKGPIFSLKWNKKGDYLLT 332 (502)
Q Consensus 290 ----------------------------------~s~~~dg~i~iwd~---~~~~~~~~~~~~~~v~~l~~~~~~~~l~s 332 (502)
..|...|.|.+..+ .-..+..+.+|.+.+.+++|.+....|.+
T Consensus 135 dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfS 214 (404)
T KOG1409|consen 135 DKQFAWHCTESGNRLGGYNFETPASALQFDALYAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFS 214 (404)
T ss_pred ccceEEEeeccCCcccceEeeccCCCCceeeEEEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEe
Confidence 22333344443332 23466788899999999999999999999
Q ss_pred EecCCeEEEEEcCCCc-eEEEEeeccCCeEEEEecC-CCEEEEEeCCCeEEEEEcCC
Q 010754 333 GSCDKTAIVWDVKTEE-WKQQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGE 387 (502)
Q Consensus 333 ~~~d~~i~~wd~~~~~-~~~~~~~~~~~v~~v~~~~-~~~~~~~~~d~~i~i~d~~~ 387 (502)
|..|..+.+||+-..+ ......+|...|..+.+.+ -..+++++.||.|.+|+++.
T Consensus 215 g~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~ 271 (404)
T KOG1409|consen 215 GASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNV 271 (404)
T ss_pred ccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEeccc
Confidence 9999999999996543 3345667888888887754 45688999999999999865
No 271
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.04 E-value=3.3e-07 Score=100.24 Aligned_cols=244 Identities=10% Similarity=0.051 Sum_probs=153.9
Q ss_pred EEEEEcCC-CCeEEEEeCCCcEEEEecCCCCccCCCCC-CCceeEEEeeecCc-cccCCCCeEEEEECCCCCEEEEEE-C
Q 010754 219 CACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQN-GPLNVLVLKHVKGR-TNEKSKDVTTLDWNGEGTLLATGS-Y 294 (502)
Q Consensus 219 ~~~~~~p~-~~~l~sgs~dg~v~iw~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~v~~l~~s~~g~~l~s~~-~ 294 (502)
..+++++. +.++++-+.++.|++||...... ..+.. +.... ..+. ....-.....++++++++.|+++. .
T Consensus 571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G~~i-~~ig~~g~~G~-----~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~ 644 (1057)
T PLN02919 571 GKLAIDLLNNRLFISDSNHNRIVVTDLDGNFI-VQIGSTGEEGL-----RDGSFEDATFNRPQGLAYNAKKNLLYVADTE 644 (1057)
T ss_pred ceEEEECCCCeEEEEECCCCeEEEEeCCCCEE-EEEccCCCcCC-----CCCchhccccCCCcEEEEeCCCCEEEEEeCC
Confidence 46788874 66778878889999999764321 10000 00000 0000 001123467899999888766665 4
Q ss_pred CCeEEEEECCCceEEEecCc-----------------cCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCCceEEEEeec
Q 010754 295 DGQARIWSTNGDLKCTLSKH-----------------KGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH 356 (502)
Q Consensus 295 dg~i~iwd~~~~~~~~~~~~-----------------~~~v~~l~~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~ 356 (502)
++.|+++|..+..+.++.+- -.....++|+| ++..+++.+.++.|++||..++... .+.+.
T Consensus 645 n~~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~-~~~G~ 723 (1057)
T PLN02919 645 NHALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTR-VFSGD 723 (1057)
T ss_pred CceEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEE-EEecC
Confidence 57899999877666554321 11236799999 5566667777899999998776543 22211
Q ss_pred ---------------cCCeEEEEecCCC--EEEEEeCCCeEEEEEcCCCcceEEEec-------------C--------C
Q 010754 357 ---------------SGPTLDVDWRNNV--SFATSSTDNMIYVCKIGENRPIKTFAG-------------H--------Q 398 (502)
Q Consensus 357 ---------------~~~v~~v~~~~~~--~~~~~~~d~~i~i~d~~~~~~~~~~~~-------------h--------~ 398 (502)
-.....|++++++ .+++-+.++.|++||+.++.......+ + -
T Consensus 724 G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l 803 (1057)
T PLN02919 724 GYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLL 803 (1057)
T ss_pred CccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhc
Confidence 1134567887754 466667789999999987653211100 0 1
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEec-------------cCCCcEEEEEEccCCCCCCCCCccEEEE
Q 010754 399 GEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR-------------EHSKEIYTIRWSPTGSGTNNPNQQLILA 465 (502)
Q Consensus 399 ~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~-------------~h~~~i~~v~~sp~g~~~~~~~~~l~la 465 (502)
....+++++++|.++++-+.++.|++||..++....... +.-.....|+++++|. .+++-
T Consensus 804 ~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~-------lyVaD 876 (1057)
T PLN02919 804 QHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGR-------LFVAD 876 (1057)
T ss_pred cCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCC-------EEEEE
Confidence 134689999999999999999999999998876653221 1112467899999987 44444
Q ss_pred eecCceEEEEe
Q 010754 466 RLIPYFLYWIC 476 (502)
Q Consensus 466 s~~~~~~iw~~ 476 (502)
+.++.+++|+.
T Consensus 877 t~Nn~Irvid~ 887 (1057)
T PLN02919 877 TNNSLIRYLDL 887 (1057)
T ss_pred CCCCEEEEEEC
Confidence 55677788764
No 272
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.02 E-value=8.8e-10 Score=104.47 Aligned_cols=218 Identities=16% Similarity=0.267 Sum_probs=153.5
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
.+..+.||+..|..++--.+.+-+++++.|.+|++|.+....-.. ...........|..+|.++-|-.+-
T Consensus 727 rL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~----------~tsaCQfTY~aHkk~i~~igfL~~l 796 (1034)
T KOG4190|consen 727 RLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEI----------GTSACQFTYQAHKKPIHDIGFLADL 796 (1034)
T ss_pred eeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCcc----------ccceeeeEhhhccCcccceeeeecc
Confidence 456678999999999877778889999999999999987532100 0011233456778899999999888
Q ss_pred CEEEEEECCCeEEEEEC-CCceEEEe--cCccCCeEEEEEec--CCCEEEEE-ecCCeEEEEEcCCCceEEEEeec----
Q 010754 287 TLLATGSYDGQARIWST-NGDLKCTL--SKHKGPIFSLKWNK--KGDYLLTG-SCDKTAIVWDVKTEEWKQQFEFH---- 356 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~-~~~~~~~~--~~~~~~v~~l~~~~--~~~~l~s~-~~d~~i~~wd~~~~~~~~~~~~~---- 356 (502)
++++++ ||.|.+||. .+...... ....+.+..++.-+ +...++++ +...+|+++|.+...+...++.-
T Consensus 797 r~i~Sc--D~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~ 874 (1034)
T KOG4190|consen 797 RSIASC--DGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPG 874 (1034)
T ss_pred ceeeec--cCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCC
Confidence 887655 799999994 34333211 11122333333333 33444444 77899999999999887776543
Q ss_pred -cCCeEEEEecC-CCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEE-EECCCCeeE
Q 010754 357 -SGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKI-WNMKQDKYV 433 (502)
Q Consensus 357 -~~~v~~v~~~~-~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~i-wd~~~~~~~ 433 (502)
...+.+++..+ ++.++++-..|+|.+.|.++|+.+..++........++ .|..+.|+....|.++.+ |....+...
T Consensus 875 Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqla-apsdq~L~~saldHslaVnWhaldgimh 953 (1034)
T KOG4190|consen 875 PNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLA-APSDQALAQSALDHSLAVNWHALDGIMH 953 (1034)
T ss_pred CchheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhc-CchhHHHHhhcccceeEeeehhcCCeee
Confidence 23467777754 56688888999999999999998888876655555554 467788888888999999 987776655
Q ss_pred EEec
Q 010754 434 HDLR 437 (502)
Q Consensus 434 ~~~~ 437 (502)
...+
T Consensus 954 ~q~k 957 (1034)
T KOG4190|consen 954 LQDK 957 (1034)
T ss_pred eccC
Confidence 5544
No 273
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.02 E-value=1.9e-06 Score=78.67 Aligned_cols=240 Identities=13% Similarity=0.187 Sum_probs=158.9
Q ss_pred cCCCceEEEEEcCCCCeEEEEeCC---CcEEEEecCC--CCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC
Q 010754 213 GHTSEVCACAWSPAGSLLASGSGD---STARIWTIAD--GTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 213 ~H~~~V~~~~~~p~~~~l~sgs~d---g~v~iw~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~ 287 (502)
.+.+.++=++|+|++++|.++..+ |.|..|.+.. +... +..........-+.++++++|+
T Consensus 37 ~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt---------------~ln~~~~~g~~p~yvsvd~~g~ 101 (346)
T COG2706 37 AELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLT---------------FLNRQTLPGSPPCYVSVDEDGR 101 (346)
T ss_pred cccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEE---------------EeeccccCCCCCeEEEECCCCC
Confidence 455777889999999988888654 7788887765 3211 1111111122348899999999
Q ss_pred EEEEEECC-CeEEEEECCC--ce--EEEecCccCC----------eEEEEEecCCCEEEEEec-CCeEEEEEcCCCceEE
Q 010754 288 LLATGSYD-GQARIWSTNG--DL--KCTLSKHKGP----------IFSLKWNKKGDYLLTGSC-DKTAIVWDVKTEEWKQ 351 (502)
Q Consensus 288 ~l~s~~~d-g~i~iwd~~~--~~--~~~~~~~~~~----------v~~l~~~~~~~~l~s~~~-d~~i~~wd~~~~~~~~ 351 (502)
+++++.+. |.|.++-++. .+ ......|.+. +....+.|++++|++++. --.|.+|++..|+...
T Consensus 102 ~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~ 181 (346)
T COG2706 102 FVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTP 181 (346)
T ss_pred EEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCcccc
Confidence 99999875 7999998752 21 2223345444 888999999999998765 3479999998776433
Q ss_pred EEe---eccCCeEEEEecCCCEEE--EEeCCCeEEEEEcCCC-cceEEEec---------CCCcEEEEEEcCCCCEEEEE
Q 010754 352 QFE---FHSGPTLDVDWRNNVSFA--TSSTDNMIYVCKIGEN-RPIKTFAG---------HQGEVNCVKWDPTGSLLASC 416 (502)
Q Consensus 352 ~~~---~~~~~v~~v~~~~~~~~~--~~~~d~~i~i~d~~~~-~~~~~~~~---------h~~~i~~l~~sp~g~~las~ 416 (502)
.-. .......-|.|+|+..++ ++--+++|.+|..... ..+..+.. -......|.++|+|++|.++
T Consensus 182 ~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYas 261 (346)
T COG2706 182 ADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYAS 261 (346)
T ss_pred ccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEe
Confidence 211 234467889999998854 5567899999998874 22222221 12457789999999999887
Q ss_pred eC-CCcEEEEECCC--CeeE--EEeccCCCcEEEEEEccCCCCCCCCCccEEEEeec-CceEEE
Q 010754 417 SD-DVTAKIWNMKQ--DKYV--HDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLI-PYFLYW 474 (502)
Q Consensus 417 s~-dg~i~iwd~~~--~~~~--~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~-~~~~iw 474 (502)
.. ...|-++.+.. +++. .....+...-+...|+|.|. .|+.+.-+ ..+.++
T Consensus 262 NRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~-------~Liaa~q~sd~i~vf 318 (346)
T COG2706 262 NRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGR-------FLIAANQKSDNITVF 318 (346)
T ss_pred cCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCC-------EEEEEccCCCcEEEE
Confidence 64 44788887754 3322 22223444467888999887 55555544 334444
No 274
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=98.99 E-value=3.7e-10 Score=112.52 Aligned_cols=214 Identities=17% Similarity=0.254 Sum_probs=159.2
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
..++++.|+..-+|++|+-+.+.|+.|+..|.|+++++.+|.. ..+.+.|...|+-+.=+.+|
T Consensus 1093 ~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~-----------------e~s~ncH~SavT~vePs~dg 1155 (1516)
T KOG1832|consen 1093 SWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSM-----------------EESVNCHQSAVTLVEPSVDG 1155 (1516)
T ss_pred cchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccc-----------------cccccccccccccccccCCc
Confidence 3567888999999999999999999999999999999998763 34556788899999989999
Q ss_pred CEEEEEECCC--eEEEEECCC--ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEee----ccC
Q 010754 287 TLLATGSYDG--QARIWSTNG--DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF----HSG 358 (502)
Q Consensus 287 ~~l~s~~~dg--~i~iwd~~~--~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~----~~~ 358 (502)
..+++.+... ...+|+... ....++. .-.+++|+.....-+.|+....+.+||+.++..+.++.. ..-
T Consensus 1156 s~~Ltsss~S~PlsaLW~~~s~~~~~Hsf~----ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y 1231 (1516)
T KOG1832|consen 1156 STQLTSSSSSSPLSALWDASSTGGPRHSFD----EDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSY 1231 (1516)
T ss_pred ceeeeeccccCchHHHhccccccCcccccc----ccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhh
Confidence 8777665433 567998753 3333332 346788887655555566667899999999987776322 112
Q ss_pred CeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEecc
Q 010754 359 PTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE 438 (502)
Q Consensus 359 ~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~ 438 (502)
.-....|+|...++. .|| .+||++..+.++.|...+..+. -.|+|+|.-++.-+. |||+++.++++....
T Consensus 1232 ~~n~a~FsP~D~LIl--ndG--vLWDvR~~~aIh~FD~ft~~~~-G~FHP~g~eVIINSE-----IwD~RTF~lLh~VP~ 1301 (1516)
T KOG1832|consen 1232 SNNLAHFSPCDTLIL--NDG--VLWDVRIPEAIHRFDQFTDYGG-GGFHPSGNEVIINSE-----IWDMRTFKLLHSVPS 1301 (1516)
T ss_pred hccccccCCCcceEe--eCc--eeeeeccHHHHhhhhhheeccc-ccccCCCceEEeech-----hhhhHHHHHHhcCcc
Confidence 235677888877765 455 4799999988888876553333 359999999988764 899999998877653
Q ss_pred CCCcEEEEEEccCCC
Q 010754 439 HSKEIYTIRWSPTGS 453 (502)
Q Consensus 439 h~~~i~~v~~sp~g~ 453 (502)
-. -..|.|+..|.
T Consensus 1302 Ld--qc~VtFNstG~ 1314 (1516)
T KOG1832|consen 1302 LD--QCAVTFNSTGD 1314 (1516)
T ss_pred cc--ceEEEeccCcc
Confidence 33 35778888887
No 275
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.98 E-value=2.1e-07 Score=91.65 Aligned_cols=190 Identities=12% Similarity=0.112 Sum_probs=122.6
Q ss_pred CeEEEEECCCCCE-EEEEECC---CeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEE-ecC--CeEEEEEcCCCc
Q 010754 276 DVTTLDWNGEGTL-LATGSYD---GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTG-SCD--KTAIVWDVKTEE 348 (502)
Q Consensus 276 ~v~~l~~s~~g~~-l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~-~~d--~~i~~wd~~~~~ 348 (502)
.+....|+|||+. ++..+.. ..|.++|+.+.....+....+......|+|+|+.++.. +.+ ..|.++|+.++.
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~ 268 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKT 268 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCc
Confidence 4678899999984 6654443 46888898776666665566667788999999877643 333 468888988876
Q ss_pred eEEEEeeccCCeEEEEecCCCE-EEEEeC-CC--eEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCC-----
Q 010754 349 WKQQFEFHSGPTLDVDWRNNVS-FATSST-DN--MIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD----- 419 (502)
Q Consensus 349 ~~~~~~~~~~~v~~v~~~~~~~-~~~~~~-d~--~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~d----- 419 (502)
..+ +..+........|+|++. ++..+. .+ .|+++|+.++...+.... ... ...|+|+|++|+..+..
T Consensus 269 ~~~-LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~-g~~--~~~~SPDG~~Ia~~~~~~~~~~ 344 (419)
T PRK04043 269 LTQ-ITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFH-GKN--NSSVSTYKNYIVYSSRETNNEF 344 (419)
T ss_pred EEE-cccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccC-CCc--CceECCCCCEEEEEEcCCCccc
Confidence 443 433333344567988764 444332 22 688888887765333221 111 24899999998877653
Q ss_pred ----CcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeec-CceEEEEeee
Q 010754 420 ----VTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLI-PYFLYWICSI 478 (502)
Q Consensus 420 ----g~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~-~~~~iw~~~~ 478 (502)
..|.+.|+.++.. ..+... .......|+|||. .++.++.. +...++..++
T Consensus 345 ~~~~~~I~v~d~~~g~~-~~LT~~-~~~~~p~~SPDG~-------~I~f~~~~~~~~~L~~~~l 399 (419)
T PRK04043 345 GKNTFNLYLISTNSDYI-RRLTAN-GVNQFPRFSSDGG-------SIMFIKYLGNQSALGIIRL 399 (419)
T ss_pred CCCCcEEEEEECCCCCe-EECCCC-CCcCCeEECCCCC-------EEEEEEccCCcEEEEEEec
Confidence 2678888887764 344432 2334689999998 55555544 4445665444
No 276
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.97 E-value=3.7e-07 Score=89.96 Aligned_cols=190 Identities=9% Similarity=0.046 Sum_probs=119.7
Q ss_pred ceEEEEEcCCCCe-EEEEeCC---CcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEE
Q 010754 217 EVCACAWSPAGSL-LASGSGD---STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG 292 (502)
Q Consensus 217 ~V~~~~~~p~~~~-l~sgs~d---g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~ 292 (502)
.+....|+|+|+. ++..+.+ ..|.++|+.+++... +. ...+......|+|||+.|+..
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~--------------lt----~~~g~~~~~~~SPDG~~la~~ 250 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEK--------------IA----SSQGMLVVSDVSKDGSKLLLT 250 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEE--------------Ee----cCCCcEEeeEECCCCCEEEEE
Confidence 6788999999984 6654443 458888887764211 10 012345667899999877654
Q ss_pred E-CC--CeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEec-CC--eEEEEEcCCCceEEEEeeccCCeEEEEec
Q 010754 293 S-YD--GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSC-DK--TAIVWDVKTEEWKQQFEFHSGPTLDVDWR 366 (502)
Q Consensus 293 ~-~d--g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~-d~--~i~~wd~~~~~~~~~~~~~~~~v~~v~~~ 366 (502)
. .+ ..|.++++.+.....+..+........|+|+|+.|+..+. .+ .|.++|+.+++..+.... .. ....|+
T Consensus 251 ~~~~g~~~Iy~~dl~~g~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~-g~--~~~~~S 327 (419)
T PRK04043 251 MAPKGQPDIYLYDTNTKTLTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFH-GK--NNSSVS 327 (419)
T ss_pred EccCCCcEEEEEECCCCcEEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccC-CC--cCceEC
Confidence 3 33 5688888877666656555544456789999988776553 23 688889888776443321 11 124788
Q ss_pred CCCE-EEEEeCC---------CeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCC-C--cEEEEECCC
Q 010754 367 NNVS-FATSSTD---------NMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD-V--TAKIWNMKQ 429 (502)
Q Consensus 367 ~~~~-~~~~~~d---------~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~d-g--~i~iwd~~~ 429 (502)
|++. ++..+.. ..|.+.|+.++.. ..+... .......|+|||+.|+..+.+ + .|.+.++..
T Consensus 328 PDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT~~-~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g 401 (419)
T PRK04043 328 TYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI-RRLTAN-GVNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNY 401 (419)
T ss_pred CCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe-EECCCC-CCcCCeEECCCCCEEEEEEccCCcEEEEEEecCC
Confidence 7765 4333322 3688889887764 333322 233358899999988766543 2 366666654
No 277
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=98.96 E-value=2e-09 Score=105.42 Aligned_cols=205 Identities=20% Similarity=0.322 Sum_probs=140.8
Q ss_pred EEeccCCCceEEEEEcCC-CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC
Q 010754 209 TILEGHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~-~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~ 287 (502)
..+.||+..|+.+.|+|. ...|++++.|..+..||+.+... .++.. ..-....+.+.|+-...
T Consensus 108 f~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~---------p~ys~-------~~w~s~asqVkwnyk~p 171 (1081)
T KOG0309|consen 108 FVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHR---------PFYST-------SSWRSAASQVKWNYKDP 171 (1081)
T ss_pred EEEecCccceeccccCCCCCcceeeccccccceeeeccCCCc---------ceeee-------ecccccCceeeecccCc
Confidence 567899999999999996 57999999999999999986432 11111 11123567889987666
Q ss_pred EEEEEECCCeEEEEECC--CceEEEecCccCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCCceEEE-EeeccCCeEEE
Q 010754 288 LLATGSYDGQARIWSTN--GDLKCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEEWKQQ-FEFHSGPTLDV 363 (502)
Q Consensus 288 ~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~v~~l~~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~-~~~~~~~v~~v 363 (502)
.+++.+....|++||.+ +.....+++|...|..+.|+. ....+.+++.||+|+.||......... ......++..-
T Consensus 172 ~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~ 251 (1081)
T KOG0309|consen 172 NVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRG 251 (1081)
T ss_pred chhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcceec
Confidence 66666777899999976 567888889999999999976 335788999999999999854332111 11233344444
Q ss_pred EecC--CCEEEEEe-CCCeEEEEEc---------C-CCcceEEEecCCCcEEEEEEcCCC----------CEEEEEeCCC
Q 010754 364 DWRN--NVSFATSS-TDNMIYVCKI---------G-ENRPIKTFAGHQGEVNCVKWDPTG----------SLLASCSDDV 420 (502)
Q Consensus 364 ~~~~--~~~~~~~~-~d~~i~i~d~---------~-~~~~~~~~~~h~~~i~~l~~sp~g----------~~las~s~dg 420 (502)
.+.| ++.++.-. .+..+.+++. . ..+++.+|.||.+.|....|-..+ -.|++=|.|.
T Consensus 252 r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~ 331 (1081)
T KOG0309|consen 252 RYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQ 331 (1081)
T ss_pred cccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCC
Confidence 4433 12222111 1223333332 2 246899999999988776664422 2689999999
Q ss_pred cEEEEECCC
Q 010754 421 TAKIWNMKQ 429 (502)
Q Consensus 421 ~i~iwd~~~ 429 (502)
++++|-+.+
T Consensus 332 ~lrlWpI~~ 340 (1081)
T KOG0309|consen 332 TLRLWPIDS 340 (1081)
T ss_pred ceEeeeccH
Confidence 999998754
No 278
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=98.93 E-value=1.1e-08 Score=93.79 Aligned_cols=159 Identities=18% Similarity=0.205 Sum_probs=110.4
Q ss_pred eEEEEECCCCCEEEEEECCCeEEEEECCCceE----EEecCccCCeEEEEEecCCCEEEEEecCC---eEEEEEcCCCce
Q 010754 277 VTTLDWNGEGTLLATGSYDGQARIWSTNGDLK----CTLSKHKGPIFSLKWNKKGDYLLTGSCDK---TAIVWDVKTEEW 349 (502)
Q Consensus 277 v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~~~v~~l~~~~~~~~l~s~~~d~---~i~~wd~~~~~~ 349 (502)
+..+..++.++++|++..+....+++...... .........-+++.|..+......+..-| .+.+|....+.+
T Consensus 65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~~ 144 (390)
T KOG3914|consen 65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGRC 144 (390)
T ss_pred ccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccccCc
Confidence 34445667888888888888777776543221 11112222334555555555555554444 455555444433
Q ss_pred EEEEeeccCCeEEEEecCCCE-EEEEeCCCeEEEEEcCCCcceEEE-ecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 010754 350 KQQFEFHSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTF-AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNM 427 (502)
Q Consensus 350 ~~~~~~~~~~v~~v~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~-~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~ 427 (502)
..+-+|-..+++|.|+++.. ++++..|..|++-.....-.+..| -||+.-|..++.-++ ..|+|||.|++|++||+
T Consensus 145 -~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~-~~LlS~sGD~tlr~Wd~ 222 (390)
T KOG3914|consen 145 -EPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDN-YLLLSGSGDKTLRLWDI 222 (390)
T ss_pred -chhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccC-ceeeecCCCCcEEEEec
Confidence 34557889999999987655 778889999999888777666665 469999999999855 56899999999999999
Q ss_pred CCCeeEEEec
Q 010754 428 KQDKYVHDLR 437 (502)
Q Consensus 428 ~~~~~~~~~~ 437 (502)
.+|++++++.
T Consensus 223 ~sgk~L~t~d 232 (390)
T KOG3914|consen 223 TSGKLLDTCD 232 (390)
T ss_pred ccCCcccccc
Confidence 9999886654
No 279
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.92 E-value=6.5e-07 Score=97.96 Aligned_cols=213 Identities=12% Similarity=0.049 Sum_probs=132.1
Q ss_pred eEEEEEcCCCCeEEEE-eCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC-CCCEEEEEECC
Q 010754 218 VCACAWSPAGSLLASG-SGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EGTLLATGSYD 295 (502)
Q Consensus 218 V~~~~~~p~~~~l~sg-s~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~-~g~~l~s~~~d 295 (502)
-..++++++++.|+.+ ...+.|+++|+.++.... +............-.......-..-..++++| ++.++++.+.+
T Consensus 626 P~GIavd~~gn~LYVaDt~n~~Ir~id~~~~~V~t-lag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~ 704 (1057)
T PLN02919 626 PQGLAYNAKKNLLYVADTENHALREIDFVNETVRT-LAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQ 704 (1057)
T ss_pred CcEEEEeCCCCEEEEEeCCCceEEEEecCCCEEEE-EeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCC
Confidence 4788999887755554 445779999987653210 00000000000000000000012346899999 56666777778
Q ss_pred CeEEEEECCCceEEEecCc---------------cCCeEEEEEecCCCEEE-EEecCCeEEEEEcCCCceEEEEee----
Q 010754 296 GQARIWSTNGDLKCTLSKH---------------KGPIFSLKWNKKGDYLL-TGSCDKTAIVWDVKTEEWKQQFEF---- 355 (502)
Q Consensus 296 g~i~iwd~~~~~~~~~~~~---------------~~~v~~l~~~~~~~~l~-s~~~d~~i~~wd~~~~~~~~~~~~---- 355 (502)
+.|++||..+.....+.+. -.....|+|+|+++.|+ +-+.++.|++||+.++.......+
T Consensus 705 ~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~ 784 (1057)
T PLN02919 705 HQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTF 784 (1057)
T ss_pred CeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEeccccc
Confidence 9999999876544433211 12346799999998555 445578999999987653211100
Q ss_pred ---------c--------cCCeEEEEecCCC-EEEEEeCCCeEEEEEcCCCcceEEEecC--------------CCcEEE
Q 010754 356 ---------H--------SGPTLDVDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFAGH--------------QGEVNC 403 (502)
Q Consensus 356 ---------~--------~~~v~~v~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~h--------------~~~i~~ 403 (502)
. ......+++.+++ .+++-..+++|++||..++.... +.+. -.....
T Consensus 785 ~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~t-iaG~G~~G~~dG~~~~a~l~~P~G 863 (1057)
T PLN02919 785 SDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTT-LAGTGKAGFKDGKALKAQLSEPAG 863 (1057)
T ss_pred CcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEE-EeccCCcCCCCCcccccccCCceE
Confidence 0 0123467776654 56677788999999998765443 2221 125778
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCee
Q 010754 404 VKWDPTGSLLASCSDDVTAKIWNMKQDKY 432 (502)
Q Consensus 404 l~~sp~g~~las~s~dg~i~iwd~~~~~~ 432 (502)
|+++++|+++++-+.++.|++||+.+++.
T Consensus 864 Iavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 864 LALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred EEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 99999999999989999999999988764
No 280
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.92 E-value=6.3e-06 Score=78.11 Aligned_cols=232 Identities=9% Similarity=0.009 Sum_probs=132.5
Q ss_pred EcCCCCeEEEEeC----------CCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEE
Q 010754 223 WSPAGSLLASGSG----------DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG 292 (502)
Q Consensus 223 ~~p~~~~l~sgs~----------dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~ 292 (502)
++||++.|+.+.. +..|.+||..+.+....+...+.+ ..........++++|||++|++.
T Consensus 53 ~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p----------~~~~~~~~~~~~ls~dgk~l~V~ 122 (352)
T TIGR02658 53 VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGP----------RFLVGTYPWMTSLTPDNKTLLFY 122 (352)
T ss_pred ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCc----------hhhccCccceEEECCCCCEEEEe
Confidence 9999987776655 789999999998754332221100 00012234578899999999987
Q ss_pred EC--CCeEEEEECCCceEE-EecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCce-EEEEee-cc--CCeEEE-
Q 010754 293 SY--DGQARIWSTNGDLKC-TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK-TEEW-KQQFEF-HS--GPTLDV- 363 (502)
Q Consensus 293 ~~--dg~i~iwd~~~~~~~-~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~-~~~~-~~~~~~-~~--~~v~~v- 363 (502)
.. +..|.+.|+....+. .... .+...-...+++..+ +-+.||......+. +++. ...... +. .++..-
T Consensus 123 n~~p~~~V~VvD~~~~kvv~ei~v-p~~~~vy~t~e~~~~--~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP 199 (352)
T TIGR02658 123 QFSPSPAVGVVDLEGKAFVRMMDV-PDCYHIFPTANDTFF--MHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHP 199 (352)
T ss_pred cCCCCCEEEEEECCCCcEEEEEeC-CCCcEEEEecCCccE--EEeecCceEEEEecCCCceEEeeeeeecCCccccccCC
Confidence 73 589999998765443 3332 222222333322222 22345544443332 1221 111110 11 111000
Q ss_pred E-ecCCCEEEEEeCCCeEEEEEcCCC-----cceEEEec-------CCCcEEEEEEcCCCCEEEEEeC----------CC
Q 010754 364 D-WRNNVSFATSSTDNMIYVCKIGEN-----RPIKTFAG-------HQGEVNCVKWDPTGSLLASCSD----------DV 420 (502)
Q Consensus 364 ~-~~~~~~~~~~~~d~~i~i~d~~~~-----~~~~~~~~-------h~~~i~~l~~sp~g~~las~s~----------dg 420 (502)
. +..++..+-.+..|.|++.|+... .+...+.. ..+.+.-++++|+++.+..... .+
T Consensus 200 ~~~~~dg~~~~vs~eG~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~ 279 (352)
T TIGR02658 200 AYSNKSGRLVWPTYTGKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASR 279 (352)
T ss_pred ceEcCCCcEEEEecCCeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCC
Confidence 1 222444444444499999996443 33333221 1223445999999998877431 24
Q ss_pred cEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEE-Ee-ecCceEEEE
Q 010754 421 TAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLIL-AR-LIPYFLYWI 475 (502)
Q Consensus 421 ~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~l-as-~~~~~~iw~ 475 (502)
.|.++|..+++.+..+.. ...+..|+++|||. .++. +. .++++.+.+
T Consensus 280 ~V~ViD~~t~kvi~~i~v-G~~~~~iavS~Dgk-------p~lyvtn~~s~~VsViD 328 (352)
T TIGR02658 280 FLFVVDAKTGKRLRKIEL-GHEIDSINVSQDAK-------PLLYALSTGDKTLYIFD 328 (352)
T ss_pred EEEEEECCCCeEEEEEeC-CCceeeEEECCCCC-------eEEEEeCCCCCcEEEEE
Confidence 799999999999998873 45799999999986 3343 33 346666665
No 281
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.91 E-value=6.5e-06 Score=75.67 Aligned_cols=209 Identities=12% Similarity=0.160 Sum_probs=139.3
Q ss_pred EEEEcC-CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEEC-CCCCEEEEEECCCe
Q 010754 220 ACAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN-GEGTLLATGSYDGQ 297 (502)
Q Consensus 220 ~~~~~p-~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s-~~g~~l~s~~~dg~ 297 (502)
+++|.+ ++.++++-...+.|..|+..++... . .. ......+++. +++ .|+.+...+
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~------------~--~~------~~~~~G~~~~~~~g-~l~v~~~~~- 61 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVE------------V--ID------LPGPNGMAFDRPDG-RLYVADSGG- 61 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEE------------E--EE------SSSEEEEEEECTTS-EEEEEETTC-
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEE------------E--Ee------cCCCceEEEEccCC-EEEEEEcCc-
Confidence 578998 6777888778899999998876421 0 00 1126777777 564 555555544
Q ss_pred EEEEECCCceEEEecC------ccCCeEEEEEecCCCEEEEEecC--------CeEEEEEcCCCceEEEEeeccCCeEEE
Q 010754 298 ARIWSTNGDLKCTLSK------HKGPIFSLKWNKKGDYLLTGSCD--------KTAIVWDVKTEEWKQQFEFHSGPTLDV 363 (502)
Q Consensus 298 i~iwd~~~~~~~~~~~------~~~~v~~l~~~~~~~~l~s~~~d--------~~i~~wd~~~~~~~~~~~~~~~~v~~v 363 (502)
+.++|........+.. .....+.+++.|+|+..++.... |.|..++.. ++... +...-.....|
T Consensus 62 ~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~-~~~~~~~pNGi 139 (246)
T PF08450_consen 62 IAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTV-VADGLGFPNGI 139 (246)
T ss_dssp EEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEE-EEEEESSEEEE
T ss_pred eEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEE-EecCcccccce
Confidence 5555877654433322 23457889999999977765543 557777776 55433 33345567899
Q ss_pred EecCCCE--EEEEeCCCeEEEEEcCCCcc----eEEE---ecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEE
Q 010754 364 DWRNNVS--FATSSTDNMIYVCKIGENRP----IKTF---AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH 434 (502)
Q Consensus 364 ~~~~~~~--~~~~~~d~~i~i~d~~~~~~----~~~~---~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~ 434 (502)
+|++++. +++-+..+.|..|++..... ...+ ....+..-.++++.+|++.++....+.|.+++.. |+.+.
T Consensus 140 ~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~ 218 (246)
T PF08450_consen 140 AFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLR 218 (246)
T ss_dssp EEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEE
T ss_pred EECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEE
Confidence 9988764 45667888999999864322 1222 2222348899999999998888889999999977 89888
Q ss_pred EeccCCCcEEEEEEc-cCCC
Q 010754 435 DLREHSKEIYTIRWS-PTGS 453 (502)
Q Consensus 435 ~~~~h~~~i~~v~~s-p~g~ 453 (502)
.+......+++++|. |+..
T Consensus 219 ~i~~p~~~~t~~~fgg~~~~ 238 (246)
T PF08450_consen 219 EIELPVPRPTNCAFGGPDGK 238 (246)
T ss_dssp EEE-SSSSEEEEEEESTTSS
T ss_pred EEcCCCCCEEEEEEECCCCC
Confidence 887555689999994 5544
No 282
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.90 E-value=4.2e-06 Score=76.46 Aligned_cols=221 Identities=10% Similarity=0.134 Sum_probs=140.8
Q ss_pred CCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECC---CeEEEEECCC--ceEE-
Q 010754 236 DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD---GQARIWSTNG--DLKC- 309 (502)
Q Consensus 236 dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~d---g~i~iwd~~~--~~~~- 309 (502)
+.-|.+|++.+..-... ..........++-|+|+|+++.|.++..+ |.|..|.++. ....
T Consensus 15 s~gI~v~~ld~~~g~l~--------------~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ 80 (346)
T COG2706 15 SQGIYVFNLDTKTGELS--------------LLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTF 80 (346)
T ss_pred CCceEEEEEeCcccccc--------------hhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEE
Confidence 46699999985331100 01111234568999999999999998765 6777777653 2222
Q ss_pred --EecCccCCeEEEEEecCCCEEEEEec-CCeEEEEEcCC-CceEE--EEeeccCC----------eEEEEecCCCEEEE
Q 010754 310 --TLSKHKGPIFSLKWNKKGDYLLTGSC-DKTAIVWDVKT-EEWKQ--QFEFHSGP----------TLDVDWRNNVSFAT 373 (502)
Q Consensus 310 --~~~~~~~~v~~l~~~~~~~~l~s~~~-d~~i~~wd~~~-~~~~~--~~~~~~~~----------v~~v~~~~~~~~~~ 373 (502)
.......+-..++++++|++++++.. -|.|.++-++. |.+.. ....|.+. +-...+.|++.+++
T Consensus 81 ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~ 160 (346)
T COG2706 81 LNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLV 160 (346)
T ss_pred eeccccCCCCCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEE
Confidence 12222334488999999999998876 57899998865 43222 12224433 66777788775544
Q ss_pred Ee--CCCeEEEEEcCCCcceEEE---ecCCCcEEEEEEcCCCCEEEEEeC-CCcEEEEECCCC-eeEEEecc--------
Q 010754 374 SS--TDNMIYVCKIGENRPIKTF---AGHQGEVNCVKWDPTGSLLASCSD-DVTAKIWNMKQD-KYVHDLRE-------- 438 (502)
Q Consensus 374 ~~--~d~~i~i~d~~~~~~~~~~---~~h~~~i~~l~~sp~g~~las~s~-dg~i~iwd~~~~-~~~~~~~~-------- 438 (502)
.. .-.+|.+|++..++....- -........|.|+|++++....++ +++|.+|..+.. ..+..++.
T Consensus 161 v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF 240 (346)
T COG2706 161 VPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDF 240 (346)
T ss_pred EeecCCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCcccc
Confidence 43 3457899999876532211 123456789999999999887776 899999998773 22222221
Q ss_pred -CCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEeee
Q 010754 439 -HSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICSI 478 (502)
Q Consensus 439 -h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~ 478 (502)
.......|..+|||+ ++-+|.-+.-.||.+.+
T Consensus 241 ~g~~~~aaIhis~dGr--------FLYasNRg~dsI~~f~V 273 (346)
T COG2706 241 TGTNWAAAIHISPDGR--------FLYASNRGHDSIAVFSV 273 (346)
T ss_pred CCCCceeEEEECCCCC--------EEEEecCCCCeEEEEEE
Confidence 234578899999998 34444444446665444
No 283
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.89 E-value=4.5e-07 Score=85.03 Aligned_cols=174 Identities=19% Similarity=0.173 Sum_probs=134.7
Q ss_pred EcC-CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCC-eEEE
Q 010754 223 WSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDG-QARI 300 (502)
Q Consensus 223 ~~p-~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg-~i~i 300 (502)
|++ +|.+++..|. |.+-|.+...+-.+. .++...|.-..+..+++-++.|..|| .+-|
T Consensus 327 fa~~~Gd~ia~VSR-GkaFi~~~~~~~~iq-------------------v~~~~~VrY~r~~~~~e~~vigt~dgD~l~i 386 (668)
T COG4946 327 FAVVNGDYIALVSR-GKAFIMRPWDGYSIQ-------------------VGKKGGVRYRRIQVDPEGDVIGTNDGDKLGI 386 (668)
T ss_pred hccCCCcEEEEEec-CcEEEECCCCCeeEE-------------------cCCCCceEEEEEccCCcceEEeccCCceEEE
Confidence 455 6788888887 777777655443211 12345688888888888999999999 9999
Q ss_pred EECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEEE-EeCC--
Q 010754 301 WSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFAT-SSTD-- 377 (502)
Q Consensus 301 wd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~-~~~d-- 377 (502)
+|.++..+..+...-+.|.+++.+++|++++++.....+.+.|+.++.....=....+-|+++.|+++.++++ +--+
T Consensus 387 yd~~~~e~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy 466 (668)
T COG4946 387 YDKDGGEVKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGY 466 (668)
T ss_pred EecCCceEEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcce
Confidence 9999999888888889999999999999999999999999999999987665555667899999999887554 3334
Q ss_pred --CeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEe
Q 010754 378 --NMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS 417 (502)
Q Consensus 378 --~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s 417 (502)
..|++||+..++....-. ..+.=.+-+|.|++++|.--|
T Consensus 467 ~tq~Iklydm~~~Kiy~vTT-~ta~DfsPaFD~d~ryLYfLs 507 (668)
T COG4946 467 YTQSIKLYDMDGGKIYDVTT-PTAYDFSPAFDPDGRYLYFLS 507 (668)
T ss_pred eeeeEEEEecCCCeEEEecC-CcccccCcccCCCCcEEEEEe
Confidence 468999999887654332 334445678999999876543
No 284
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.88 E-value=8.1e-07 Score=84.18 Aligned_cols=249 Identities=14% Similarity=0.155 Sum_probs=162.6
Q ss_pred CceEEEEEcCCCCeEEEEeCCC---------------cEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeE-E
Q 010754 216 SEVCACAWSPAGSLLASGSGDS---------------TARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVT-T 279 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg---------------~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~ 279 (502)
..|.-+.|+|.+++|.+=+..+ .+.+||+.++.....+.... . ..-.. -
T Consensus 72 ~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~-------------q--~~~~Wp~ 136 (561)
T COG5354 72 PDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGIS-------------Q--PYLGWPV 136 (561)
T ss_pred CCceecccCcccceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccC-------------C--cccccce
Confidence 5588899999999999876544 38899998876432221110 0 11133 5
Q ss_pred EEECCCCCEEEEEECCCeEEEEECCCceE-EEecCc-cCCeEEEEEecCC--CEEEE-----EecCCeEEEEEcCCCceE
Q 010754 280 LDWNGEGTLLATGSYDGQARIWSTNGDLK-CTLSKH-KGPIFSLKWNKKG--DYLLT-----GSCDKTAIVWDVKTEEWK 350 (502)
Q Consensus 280 l~~s~~g~~l~s~~~dg~i~iwd~~~~~~-~~~~~~-~~~v~~l~~~~~~--~~l~s-----~~~d~~i~~wd~~~~~~~ 350 (502)
+.|+.+.+++|-- ....++|+++..... .-+..- ...|....|+|.+ ..|+. .+.++++++|.+..+..+
T Consensus 137 ~k~s~~D~y~ARv-v~~sl~i~e~t~n~~~~p~~~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l 215 (561)
T COG5354 137 LKFSIDDKYVARV-VGSSLYIHEITDNIEEHPFKNLRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVL 215 (561)
T ss_pred eeeeecchhhhhh-ccCeEEEEecCCccccCchhhccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCee
Confidence 7788888776654 346789998632211 111111 3568888899964 34443 566889999999888777
Q ss_pred EEEeeccCCeEEEEecCCCEEEEE------------eCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEe-
Q 010754 351 QQFEFHSGPTLDVDWRNNVSFATS------------STDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS- 417 (502)
Q Consensus 351 ~~~~~~~~~v~~v~~~~~~~~~~~------------~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s- 417 (502)
.+.......-..+.|.+.+.++++ -....++++++.... +.....-.++|...+|.|.++.+++++
T Consensus 216 ~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~-i~V~~~~~~pVhdf~W~p~S~~F~vi~g 294 (561)
T COG5354 216 VTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERS-IPVEKDLKDPVHDFTWEPLSSRFAVISG 294 (561)
T ss_pred eeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccc-cceeccccccceeeeecccCCceeEEec
Confidence 766655555567778665543222 123567888887433 333335678999999999998877665
Q ss_pred -CCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeec---CceEEEEeeeEEEeeecccccCc
Q 010754 418 -DDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLI---PYFLYWICSIYFKYFGTTERANL 491 (502)
Q Consensus 418 -~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~---~~~~iw~~~~~~~~~g~~~~~~~ 491 (502)
.+-++.++|++.. .... ...+.=..+.|||.+. ++++|+.+ +++-+|...-.|...|.....++
T Consensus 295 ~~pa~~s~~~lr~N-l~~~--~Pe~~rNT~~fsp~~r-------~il~agF~nl~gni~i~~~~~rf~~~~~~~~~n~ 362 (561)
T COG5354 295 YMPASVSVFDLRGN-LRFY--FPEQKRNTIFFSPHER-------YILFAGFDNLQGNIEIFDPAGRFKVAGAFNGLNT 362 (561)
T ss_pred ccccceeecccccc-eEEe--cCCcccccccccCccc-------EEEEecCCccccceEEeccCCceEEEEEeecCCc
Confidence 5788999999865 4333 3445567888999988 78888777 56777765545555544444443
No 285
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=98.87 E-value=4.6e-07 Score=78.95 Aligned_cols=218 Identities=13% Similarity=0.161 Sum_probs=142.3
Q ss_pred EEEEEcCC-----CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC-CCEEEEE
Q 010754 219 CACAWSPA-----GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE-GTLLATG 292 (502)
Q Consensus 219 ~~~~~~p~-----~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~-g~~l~s~ 292 (502)
..+.|-|- -.+||.|+.-|...+|...+...... .. ..+...|+-+.=..+ .--+..+
T Consensus 71 ~g~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~~h~~------------~c----d~snn~v~~~~r~cd~~~~~~i~ 134 (344)
T KOG4532|consen 71 TGMTFTPGSFINKCVTLADGGASGQFDLFACNTNDGHLY------------QC----DVSNNDVTLVKRYCDLKFPLNIA 134 (344)
T ss_pred ecccccchHhhccccEEEeccccceeeeecccCccccee------------ee----cccccchhhhhhhcccccceeec
Confidence 34566662 34899999999999999886542110 00 011122222211111 2246677
Q ss_pred ECCCeEEEEECCCceEEEecCcc--CCeEEEEEecCCCEEEEEecCCeEEEEEcCCC-ceEEE--EeeccCCeEEEEecC
Q 010754 293 SYDGQARIWSTNGDLKCTLSKHK--GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE-EWKQQ--FEFHSGPTLDVDWRN 367 (502)
Q Consensus 293 ~~dg~i~iwd~~~~~~~~~~~~~--~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~-~~~~~--~~~~~~~v~~v~~~~ 367 (502)
+.|.++++.++++...... .|. -.+.++.++++++++++.+....|..|.+... ..+.. .......-.+..|+.
T Consensus 135 sndht~k~~~~~~~s~~~~-~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~ 213 (344)
T KOG4532|consen 135 SNDHTGKTMVVSGDSNKFA-VHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSE 213 (344)
T ss_pred cCCcceeEEEEecCcccce-eeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeecc
Confidence 8889999998875433221 122 23889999999999999999999999988543 22222 223444556777855
Q ss_pred -CCEEEEEeCCCeEEEEEcCCCcce-----EEEecCCCcEEEEEEcCCCC--EEEEEeCCCcEEEEECCCCeeEEEec--
Q 010754 368 -NVSFATSSTDNMIYVCKIGENRPI-----KTFAGHQGEVNCVKWDPTGS--LLASCSDDVTAKIWNMKQDKYVHDLR-- 437 (502)
Q Consensus 368 -~~~~~~~~~d~~i~i~d~~~~~~~-----~~~~~h~~~i~~l~~sp~g~--~las~s~dg~i~iwd~~~~~~~~~~~-- 437 (502)
+..||++..||++.|||++..... .+-..|.+.+..+.|++.|. +|...-.-+.+.+-|+++++-...+.
T Consensus 214 ~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~ 293 (344)
T KOG4532|consen 214 NDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIP 293 (344)
T ss_pred CcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecC
Confidence 566999999999999999976432 22345889999999998664 34444445789999999987655443
Q ss_pred -----cCCC-cEEEEEEccCCC
Q 010754 438 -----EHSK-EIYTIRWSPTGS 453 (502)
Q Consensus 438 -----~h~~-~i~~v~~sp~g~ 453 (502)
.|.. .|....|+.++.
T Consensus 294 ~d~~~~~~tq~ifgt~f~~~n~ 315 (344)
T KOG4532|consen 294 DDVERKHNTQHIFGTNFNNENE 315 (344)
T ss_pred ccccccccccccccccccCCCc
Confidence 2322 377777777766
No 286
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.86 E-value=3.8e-09 Score=100.28 Aligned_cols=168 Identities=15% Similarity=0.205 Sum_probs=127.4
Q ss_pred ccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCC--------ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEE
Q 010754 269 RTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG--------DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAI 340 (502)
Q Consensus 269 ~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~--------~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~ 340 (502)
.+.+|...|..++--.+.+.+++++.|.+|++|.++. .+..++..|+.+|.++.|-.+.+++++ .||.|.
T Consensus 730 nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~S--cD~giH 807 (1034)
T KOG4190|consen 730 NFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIAS--CDGGIH 807 (1034)
T ss_pred cccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeee--ccCcce
Confidence 4456777788887667778899999999999998652 256678899999999999988877775 489999
Q ss_pred EEEcCCCceEEEEee-----ccCCeEEEEecCCCEE-EEEeCCCeEEEEEcCCCcceEEEe-----cCCCcEEEEEEcCC
Q 010754 341 VWDVKTEEWKQQFEF-----HSGPTLDVDWRNNVSF-ATSSTDNMIYVCKIGENRPIKTFA-----GHQGEVNCVKWDPT 409 (502)
Q Consensus 341 ~wd~~~~~~~~~~~~-----~~~~v~~v~~~~~~~~-~~~~~d~~i~i~d~~~~~~~~~~~-----~h~~~i~~l~~sp~ 409 (502)
+||.--++.+.++.. ..+.|.++.-.....+ +.|+...+|+++|.+...-+..++ +..+.+.+++..|.
T Consensus 808 lWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~ 887 (1034)
T KOG4190|consen 808 LWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADK 887 (1034)
T ss_pred eecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccC
Confidence 999877766553321 1223333333233334 444788999999999887655543 34567899999999
Q ss_pred CCEEEEEeCCCcEEEEECCCCeeEEEecc
Q 010754 410 GSLLASCSDDVTAKIWNMKQDKYVHDLRE 438 (502)
Q Consensus 410 g~~las~s~dg~i~iwd~~~~~~~~~~~~ 438 (502)
|+++|.+=..|+|.+.|.++|+.+..++.
T Consensus 888 GN~lAa~LSnGci~~LDaR~G~vINswrp 916 (1034)
T KOG4190|consen 888 GNKLAAALSNGCIAILDARNGKVINSWRP 916 (1034)
T ss_pred cchhhHHhcCCcEEEEecCCCceeccCCc
Confidence 99999999999999999999998876653
No 287
>KOG2066 consensus Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.86 E-value=1.9e-07 Score=93.08 Aligned_cols=175 Identities=15% Similarity=0.307 Sum_probs=130.8
Q ss_pred CeEEEEECCCCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEee
Q 010754 276 DVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF 355 (502)
Q Consensus 276 ~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 355 (502)
.++|++++ +++|+.|+.+|.|++++..+.. .+...|... ...|.++++|+.||+|.|-.+-+.+...++..
T Consensus 41 ~is~~av~--~~~~~~GtH~g~v~~~~~~~~~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~~df 111 (846)
T KOG2066|consen 41 AISCCAVH--DKFFALGTHRGAVYLTTCQGNP-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQYDF 111 (846)
T ss_pred HHHHHHhh--cceeeeccccceEEEEecCCcc-ccccccccc------ccCCceEEEecCCCcEEEeeccCCccceeEec
Confidence 35666664 5799999999999999988876 444445443 66899999999999999999988887777664
Q ss_pred ccCCeEEEEecCC------CEEEEEeCCCeEEEEEcC---CCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 010754 356 HSGPTLDVDWRNN------VSFATSSTDNMIYVCKIG---ENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWN 426 (502)
Q Consensus 356 ~~~~v~~v~~~~~------~~~~~~~~d~~i~i~d~~---~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd 426 (502)
..++..|+++|+ ..|++|+..| +.++.-+ ....+ .+..-.++|.++.|. |+++|-++++| |+|||
T Consensus 112 -~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v-~l~~~eG~I~~i~W~--g~lIAWand~G-v~vyd 185 (846)
T KOG2066|consen 112 -KRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSV-VLSEGEGPIHSIKWR--GNLIAWANDDG-VKVYD 185 (846)
T ss_pred -CCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccce-eeecCccceEEEEec--CcEEEEecCCC-cEEEe
Confidence 457888888876 5599999988 7776543 22222 345567899999997 88999999998 89999
Q ss_pred CCCCeeEEEeccCCCc------EEEEEEccCCCCCCCCCccEEEEeecCceEEE
Q 010754 427 MKQDKYVHDLREHSKE------IYTIRWSPTGSGTNNPNQQLILARLIPYFLYW 474 (502)
Q Consensus 427 ~~~~~~~~~~~~h~~~------i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw 474 (502)
+.+++.+..+...... -..+.|.+... ++.+...++++.
T Consensus 186 ~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~---------LVIGW~d~v~i~ 230 (846)
T KOG2066|consen 186 TPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDR---------LVIGWGDSVKIC 230 (846)
T ss_pred ccccceeeccCCCCCCCCcccCCCceEecCCCe---------EEEecCCeEEEE
Confidence 9999888777633222 34678888766 555555554443
No 288
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=98.85 E-value=7.3e-09 Score=93.04 Aligned_cols=157 Identities=16% Similarity=0.203 Sum_probs=119.2
Q ss_pred EEEEcCC--CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCe
Q 010754 220 ACAWSPA--GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQ 297 (502)
Q Consensus 220 ~~~~~p~--~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~ 297 (502)
.|+|+-+ +.. ++.+.+..|-+-++.++... .....++|.++.|...++++..|+.+|.
T Consensus 216 ~CawSlni~gyh-fs~G~sqqv~L~nvetg~~q-------------------sf~sksDVfAlQf~~s~nLv~~GcRnge 275 (425)
T KOG2695|consen 216 SCAWSLNIMGYH-FSVGLSQQVLLTNVETGHQQ-------------------SFQSKSDVFALQFAGSDNLVFNGCRNGE 275 (425)
T ss_pred hhhhhhccceee-ecccccceeEEEEeeccccc-------------------ccccchhHHHHHhcccCCeeEecccCCc
Confidence 4477753 334 45556677888888876421 1113568999999999999999999999
Q ss_pred EEEEECCCc-----eEEEecCccCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCCce---EEEEeeccCCeEEEEe---
Q 010754 298 ARIWSTNGD-----LKCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEEW---KQQFEFHSGPTLDVDW--- 365 (502)
Q Consensus 298 i~iwd~~~~-----~~~~~~~~~~~v~~l~~~~-~~~~l~s~~~d~~i~~wd~~~~~~---~~~~~~~~~~v~~v~~--- 365 (502)
|..+|++.+ ......-|.+.|+++..-. ++.+|++.+.+|+|++||.+.-++ +.++.+|...-.-+-+
T Consensus 276 I~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~ 355 (425)
T KOG2695|consen 276 IFVIDLRCRNQGNGWCAQRLYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVK 355 (425)
T ss_pred EEEEEeeecccCCCcceEEEEcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccc
Confidence 999997633 2233445899999998877 778999999999999999988777 8888888665444443
Q ss_pred cCCCEEEEEeCCCeEEEEEcCCCcceEEEec
Q 010754 366 RNNVSFATSSTDNMIYVCKIGENRPIKTFAG 396 (502)
Q Consensus 366 ~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~ 396 (502)
..++.+++++.|...+||.++.+..+.+++.
T Consensus 356 ~eeg~I~s~GdDcytRiWsl~~ghLl~tipf 386 (425)
T KOG2695|consen 356 EEEGSIFSVGDDCYTRIWSLDSGHLLCTIPF 386 (425)
T ss_pred cccceEEEccCeeEEEEEecccCceeeccCC
Confidence 2355678899999999999999998887764
No 289
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.84 E-value=2.3e-06 Score=80.41 Aligned_cols=218 Identities=14% Similarity=0.179 Sum_probs=148.4
Q ss_pred cCCCCeEEEEeCCCcEEEEecCCCCccCCCCCC-CceeEEEeeecCccccCCCCeEEEE-ECC-CCCEEEEEECCCeEEE
Q 010754 224 SPAGSLLASGSGDSTARIWTIADGTSNGGAQNG-PLNVLVLKHVKGRTNEKSKDVTTLD-WNG-EGTLLATGSYDGQARI 300 (502)
Q Consensus 224 ~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~l~-~s~-~g~~l~s~~~dg~i~i 300 (502)
+.||+.++-. .-|.|.+||-.+..... +.-+ ++. +. ........+..-+. |++ +|.+++..+. |...|
T Consensus 275 nsDGkrIvFq-~~GdIylydP~td~lek-ldI~lpl~----rk--~k~~k~~~pskyledfa~~~Gd~ia~VSR-GkaFi 345 (668)
T COG4946 275 NSDGKRIVFQ-NAGDIYLYDPETDSLEK-LDIGLPLD----RK--KKQPKFVNPSKYLEDFAVVNGDYIALVSR-GKAFI 345 (668)
T ss_pred CCCCcEEEEe-cCCcEEEeCCCcCccee-eecCCccc----cc--cccccccCHHHhhhhhccCCCcEEEEEec-CcEEE
Confidence 4467665543 34789999987754321 1100 000 00 00000011111222 343 6889988886 77888
Q ss_pred EECCCceEEEecCccCCeEEEEEecCCCEEEEEecCC-eEEEEEcCCCceEEEEeeccCCeEEEEecCCCE-EEEEeCCC
Q 010754 301 WSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDK-TAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS-FATSSTDN 378 (502)
Q Consensus 301 wd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~-~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~~~~d~ 378 (502)
.+........+ ++.+.|.-..+.-+++-++.|..|| .+-++|.++++. ..+...-+.|.++..++++. ++++....
T Consensus 346 ~~~~~~~~iqv-~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~-kr~e~~lg~I~av~vs~dGK~~vvaNdr~ 423 (668)
T COG4946 346 MRPWDGYSIQV-GKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEV-KRIEKDLGNIEAVKVSPDGKKVVVANDRF 423 (668)
T ss_pred ECCCCCeeEEc-CCCCceEEEEEccCCcceEEeccCCceEEEEecCCceE-EEeeCCccceEEEEEcCCCcEEEEEcCce
Confidence 87655444333 5667788888888888899999999 899999988764 44566777899999998877 55666667
Q ss_pred eEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCC----cEEEEECCCCeeEEEeccCCCcEEEEEEccCCC
Q 010754 379 MIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDV----TAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 379 ~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg----~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
.|.++|+.++.+...=+...+-|+.+.|||+++++|-+--+| .|+++|+..++....-. ..+.=.+-+|.|||.
T Consensus 424 el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT-~ta~DfsPaFD~d~r 501 (668)
T COG4946 424 ELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTT-PTAYDFSPAFDPDGR 501 (668)
T ss_pred EEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecC-CcccccCcccCCCCc
Confidence 899999999987655555667899999999999999876665 69999999888764433 333345678999988
No 290
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=98.83 E-value=6.8e-07 Score=88.72 Aligned_cols=237 Identities=16% Similarity=0.173 Sum_probs=169.2
Q ss_pred eEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC-----------
Q 010754 218 VCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG----------- 286 (502)
Q Consensus 218 V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g----------- 286 (502)
-.++.|+|.| ++|.|+. ..|.+.|..+-+.+..+ ..|...|+.+.|.|-.
T Consensus 18 ~~A~Dw~~~G-LiAygsh-slV~VVDs~s~q~iqsi-----------------e~h~s~V~~VrWap~~~p~~llS~~~~ 78 (1062)
T KOG1912|consen 18 RNAADWSPSG-LIAYGSH-SLVSVVDSRSLQLIQSI-----------------ELHQSAVTSVRWAPAPSPRDLLSPSSS 78 (1062)
T ss_pred ccccccCccc-eEEEecC-ceEEEEehhhhhhhhcc-----------------ccCccceeEEEeccCCCchhccCcccc
Confidence 5678999877 6788776 57888887765544322 2345679999997631
Q ss_pred -CEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEec---CC-CEEEEEecCCeEEEEEcCCCceEEEEeeccCCe
Q 010754 287 -TLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNK---KG-DYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT 360 (502)
Q Consensus 287 -~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~---~~-~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v 360 (502)
-.||++...|.|.+||.. +..+..+..|..++..++|-+ +. ..|++.....++.+|+..+|+....+.......
T Consensus 79 ~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iL 158 (1062)
T KOG1912|consen 79 QLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEIL 158 (1062)
T ss_pred ceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcce
Confidence 257778888999999976 456667888899999999976 33 467777778899999999999888777666666
Q ss_pred EEEEecC--CCEEEEEeCCCeEEEEEcCCC----cceEEE---ecCCC-------------------------cEEEEEE
Q 010754 361 LDVDWRN--NVSFATSSTDNMIYVCKIGEN----RPIKTF---AGHQG-------------------------EVNCVKW 406 (502)
Q Consensus 361 ~~v~~~~--~~~~~~~~~d~~i~i~d~~~~----~~~~~~---~~h~~-------------------------~i~~l~~ 406 (502)
.++.+.| ...|..-+..|.+.+.+.-.. .+.+.+ ..|.. ....++|
T Consensus 159 s~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf 238 (1062)
T KOG1912|consen 159 SCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAF 238 (1062)
T ss_pred eeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhc
Confidence 6677654 344777777788877765321 122222 11211 0123567
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEeee
Q 010754 407 DPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICSI 478 (502)
Q Consensus 407 sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~ 478 (502)
+|.-+-++-......+.|+|+.-..++..+.-..+.+.=+.|-|+++ .+.|+..-.+|.+.+|.-..
T Consensus 239 ~p~~rn~lfi~~prellv~dle~~~~l~vvpier~~akfv~vlP~~~-----rd~LfclH~nG~ltirvrk~ 305 (1062)
T KOG1912|consen 239 SPHWRNILFITFPRELLVFDLEYECCLAVVPIERGGAKFVDVLPDPR-----RDALFCLHSNGRLTIRVRKE 305 (1062)
T ss_pred ChhhhceEEEEeccceEEEcchhhceeEEEEeccCCcceeEeccCCC-----cceEEEEecCCeEEEEEeec
Confidence 88766555555667799999998888888877777788899999987 34577788899999997554
No 291
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=98.83 E-value=1.2e-06 Score=83.72 Aligned_cols=237 Identities=17% Similarity=0.273 Sum_probs=154.5
Q ss_pred CceEEEEEcCCCCeEEEEeC-----------CCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC
Q 010754 216 SEVCACAWSPAGSLLASGSG-----------DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 284 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~-----------dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~ 284 (502)
..|.-+.|||..++|+|-+. -..++|||+.+|.....+.. +. .....-.-..||.
T Consensus 250 p~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~----------~~----~~~~~WP~frWS~ 315 (698)
T KOG2314|consen 250 PGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPV----------IK----SPYLKWPIFRWSH 315 (698)
T ss_pred CCceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceec----------cC----CCccccceEEecc
Confidence 35889999999999998763 15689999999875443221 00 0011133568999
Q ss_pred CCCEEEEEECCCeEEEEECCCceEEEe-cCccCCeEEEEEecCCCEEEEEec-----CCeEEEEEcCCCceEEEEeeccC
Q 010754 285 EGTLLATGSYDGQARIWSTNGDLKCTL-SKHKGPIFSLKWNKKGDYLLTGSC-----DKTAIVWDVKTEEWKQQFEFHSG 358 (502)
Q Consensus 285 ~g~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~s~~~-----d~~i~~wd~~~~~~~~~~~~~~~ 358 (502)
|++++|.-.. ..|.||+...-..... .-.-..|....|+|.++.|+--.. -..+.+..+.+++.+++-..+.-
T Consensus 316 DdKy~Arm~~-~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnV 394 (698)
T KOG2314|consen 316 DDKYFARMTG-NSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNV 394 (698)
T ss_pred CCceeEEecc-ceEEEEecCceeeecccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccceeeeccceee
Confidence 9999987766 6789998654222211 123456888999999888874322 24688888888888877766665
Q ss_pred CeEEEEecCCCEEEEEeCC-----------CeEEEEEcCCCc-ceEEEecCCCcEEEEEEcCCCCEEEEEeC---CCcEE
Q 010754 359 PTLDVDWRNNVSFATSSTD-----------NMIYVCKIGENR-PIKTFAGHQGEVNCVKWDPTGSLLASCSD---DVTAK 423 (502)
Q Consensus 359 ~v~~v~~~~~~~~~~~~~d-----------~~i~i~d~~~~~-~~~~~~~h~~~i~~l~~sp~g~~las~s~---dg~i~ 423 (502)
.-..+.|..++.+++.-.| ..+-|+.++... ++.... -...|...+|-|.|..+++-+. ..++.
T Consensus 395 sDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~ve-lke~vi~FaWEP~gdkF~vi~g~~~k~tvs 473 (698)
T KOG2314|consen 395 SDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVE-LKESVIAFAWEPHGDKFAVISGNTVKNTVS 473 (698)
T ss_pred eccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeee-cchheeeeeeccCCCeEEEEEcccccccee
Confidence 5566778665554443211 234566665543 444443 4567889999999998876654 35789
Q ss_pred EEECCC----CeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEe---ecCceEEEEee
Q 010754 424 IWNMKQ----DKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILAR---LIPYFLYWICS 477 (502)
Q Consensus 424 iwd~~~----~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las---~~~~~~iw~~~ 477 (502)
+|.+.+ .+++..+. ....+.+.|+|.|+ .+++|. ..+++.+++.+
T Consensus 474 fY~~e~~~~~~~lVk~~d--k~~~N~vfwsPkG~-------fvvva~l~s~~g~l~F~D~~ 525 (698)
T KOG2314|consen 474 FYAVETNIKKPSLVKELD--KKFANTVFWSPKGR-------FVVVAALVSRRGDLEFYDTD 525 (698)
T ss_pred EEEeecCCCchhhhhhhc--ccccceEEEcCCCc-------EEEEEEecccccceEEEecc
Confidence 998873 22334443 35688999999998 444333 34566666543
No 292
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.80 E-value=1.7e-08 Score=63.08 Aligned_cols=38 Identities=39% Similarity=0.910 Sum_probs=36.3
Q ss_pred cceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 010754 389 RPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWN 426 (502)
Q Consensus 389 ~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd 426 (502)
+++.++.+|.+.|++|+|+|++.+|++|+.|+.|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 56889999999999999999999999999999999997
No 293
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.79 E-value=1e-07 Score=84.60 Aligned_cols=205 Identities=17% Similarity=0.297 Sum_probs=139.7
Q ss_pred CCCeEEEEECCCCCEEEEEECCCeEEEEECCCce------EEEecCcc------------CCeEEEEEecCC--CEEEEE
Q 010754 274 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDL------KCTLSKHK------------GPIFSLKWNKKG--DYLLTG 333 (502)
Q Consensus 274 ~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~------~~~~~~~~------------~~v~~l~~~~~~--~~l~s~ 333 (502)
...|+++.|...|.+|++|...|.|.+|..+... ...+.+|. ..|..+.|..++ ..++..
T Consensus 26 ad~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLls 105 (460)
T COG5170 26 ADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLS 105 (460)
T ss_pred cceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEe
Confidence 3469999999999999999999999999754321 12233442 357889997654 467778
Q ss_pred ecCCeEEEEEcCCCceE------------------------------------------EEE-eeccCCeEEEEecCCCE
Q 010754 334 SCDKTAIVWDVKTEEWK------------------------------------------QQF-EFHSGPTLDVDWRNNVS 370 (502)
Q Consensus 334 ~~d~~i~~wd~~~~~~~------------------------------------------~~~-~~~~~~v~~v~~~~~~~ 370 (502)
+.|++|++|.+...... +.+ ..|.-.+.++.+..+..
T Consensus 106 tNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~e 185 (460)
T COG5170 106 TNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDKE 185 (460)
T ss_pred cCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCchh
Confidence 89999999987543100 000 12333467788877777
Q ss_pred EEEEeCCCeEEEEEcCCCcc---eEEEecCC-----CcEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCee------EEE
Q 010754 371 FATSSTDNMIYVCKIGENRP---IKTFAGHQ-----GEVNCVKWDPTG-SLLASCSDDVTAKIWNMKQDKY------VHD 435 (502)
Q Consensus 371 ~~~~~~d~~i~i~d~~~~~~---~~~~~~h~-----~~i~~l~~sp~g-~~las~s~dg~i~iwd~~~~~~------~~~ 435 (502)
.+.++.|=+|.+|++.-... +--++.|. .-|++..|+|.. ..+.-.+..|.|++-|++...+ +..
T Consensus 186 t~lSaDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klfe 265 (460)
T COG5170 186 TLLSADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKLFE 265 (460)
T ss_pred eeeeccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhhhh
Confidence 78888899999999865432 22233343 358889999964 4566677789999999984321 111
Q ss_pred ----------eccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEeeeEEEeeecc
Q 010754 436 ----------LREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICSIYFKYFGTT 486 (502)
Q Consensus 436 ----------~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~~~~~~g~~ 486 (502)
+.+-.+.|..+.|+|+|+ ++++-.--++++|+..+.-.+.-++
T Consensus 266 ~~~D~v~~~ff~eivsSISD~kFs~ngr--------yIlsRdyltvkiwDvnm~k~pikTi 318 (460)
T COG5170 266 LTIDGVDVDFFEEIVSSISDFKFSDNGR--------YILSRDYLTVKIWDVNMAKNPIKTI 318 (460)
T ss_pred hccCcccchhHHHHhhhhcceEEcCCCc--------EEEEeccceEEEEecccccCCceee
Confidence 112235689999999997 3444444889999988776665444
No 294
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.77 E-value=1.8e-08 Score=62.97 Aligned_cols=37 Identities=49% Similarity=0.917 Sum_probs=35.3
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEe
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWT 243 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~ 243 (502)
.++++++|.+.|++|+|+|++.+|++|+.|++|++||
T Consensus 3 ~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 3 CVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred EEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 4688999999999999999999999999999999997
No 295
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.72 E-value=4e-05 Score=70.22 Aligned_cols=218 Identities=13% Similarity=0.120 Sum_probs=145.3
Q ss_pred eEEEEEcC-CCCeEEEEeCCCc-EEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEEC-
Q 010754 218 VCACAWSP-AGSLLASGSGDST-ARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY- 294 (502)
Q Consensus 218 V~~~~~~p-~~~~l~sgs~dg~-v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~- 294 (502)
...++.+| .+..++.+-.-|+ +.+||..+++....+.. ....++.+ .-.||+||++|++.=.
T Consensus 7 gH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a---------~~gRHFyG------Hg~fs~dG~~LytTEnd 71 (305)
T PF07433_consen 7 GHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWA---------PPGRHFYG------HGVFSPDGRLLYTTEND 71 (305)
T ss_pred ccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcC---------CCCCEEec------CEEEcCCCCEEEEeccc
Confidence 44678888 4667777766654 67889888764322111 11122222 3469999999998744
Q ss_pred ----CCeEEEEECCC--ceEEEecCccCCeEEEEEecCCCEEEEEec------------------CCeEEEEEcCCCceE
Q 010754 295 ----DGQARIWSTNG--DLKCTLSKHKGPIFSLKWNKKGDYLLTGSC------------------DKTAIVWDVKTEEWK 350 (502)
Q Consensus 295 ----dg~i~iwd~~~--~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~------------------d~~i~~wd~~~~~~~ 350 (502)
.|.|-|||... ..+..+..|.-.-..+.+.|+|+.|+++.- +.++...|..+|+.+
T Consensus 72 ~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll 151 (305)
T PF07433_consen 72 YETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALL 151 (305)
T ss_pred cCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCcee
Confidence 38999999883 445567777666788899999987777532 235667788888887
Q ss_pred EEEee----ccCCeEEEEecCCCEEEEEeCCC------eEEEEEcCCCcceEEEe-------cCCCcEEEEEEcCCCCEE
Q 010754 351 QQFEF----HSGPTLDVDWRNNVSFATSSTDN------MIYVCKIGENRPIKTFA-------GHQGEVNCVKWDPTGSLL 413 (502)
Q Consensus 351 ~~~~~----~~~~v~~v~~~~~~~~~~~~~d~------~i~i~d~~~~~~~~~~~-------~h~~~i~~l~~sp~g~~l 413 (502)
.+... |.-.+.-+++.+++.++.+.... .-.+.-.+.+..+..+. .-.+.|-+|++++++.++
T Consensus 152 ~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~i 231 (305)
T PF07433_consen 152 EQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGALRLLPAPEEQWRRLNGYIGSIAADRDGRLI 231 (305)
T ss_pred eeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCcceeccCChHHHHhhCCceEEEEEeCCCCEE
Confidence 77443 66788899998888777664321 11222223333333332 234679999999999888
Q ss_pred EEEe-CCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCC
Q 010754 414 ASCS-DDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTG 452 (502)
Q Consensus 414 as~s-~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g 452 (502)
+..| .-|.+.+||..+++++....-. .+..++-.+++
T Consensus 232 a~tsPrGg~~~~~d~~tg~~~~~~~l~--D~cGva~~~~~ 269 (305)
T PF07433_consen 232 AVTSPRGGRVAVWDAATGRLLGSVPLP--DACGVAPTDDG 269 (305)
T ss_pred EEECCCCCEEEEEECCCCCEeeccccC--ceeeeeecCCc
Confidence 6655 4678999999999988766533 36667766665
No 296
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.70 E-value=4.8e-06 Score=81.88 Aligned_cols=221 Identities=9% Similarity=0.018 Sum_probs=132.3
Q ss_pred CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECC-C
Q 010754 227 GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-G 305 (502)
Q Consensus 227 ~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~-~ 305 (502)
+..++.++.++.+..||..+++............ . ......++ . .+..++.+..+|.+..+|.. +
T Consensus 145 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~-~-------~~~~~sp~----~--~~~~v~~~~~~g~v~ald~~tG 210 (377)
T TIGR03300 145 NGLVVVRTNDGRLTALDAATGERLWTYSRVTPAL-T-------LRGSASPV----I--ADGGVLVGFAGGKLVALDLQTG 210 (377)
T ss_pred CCEEEEECCCCeEEEEEcCCCceeeEEccCCCce-e-------ecCCCCCE----E--ECCEEEEECCCCEEEEEEccCC
Confidence 4566777788999999988876432211100000 0 00000111 1 12467778888999999975 4
Q ss_pred ceEEEecCc-c---CC---eEEEEEec--CCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEEEEeC
Q 010754 306 DLKCTLSKH-K---GP---IFSLKWNK--KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSST 376 (502)
Q Consensus 306 ~~~~~~~~~-~---~~---v~~l~~~~--~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~ 376 (502)
......... . .. +..+.-+| .+..+++++.+|.++.||..+++.+....... ..... ..++.+++++.
T Consensus 211 ~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~~--~~~p~-~~~~~vyv~~~ 287 (377)
T TIGR03300 211 QPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLWKRDASS--YQGPA-VDDNRLYVTDA 287 (377)
T ss_pred CEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEEeeccCC--ccCce-EeCCEEEEECC
Confidence 443332210 0 00 00000011 24678888899999999999998776654211 11112 23566778889
Q ss_pred CCeEEEEEcCCCcceEEEecCCC-cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCC
Q 010754 377 DNMIYVCKIGENRPIKTFAGHQG-EVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGT 455 (502)
Q Consensus 377 d~~i~i~d~~~~~~~~~~~~h~~-~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~ 455 (502)
+|.++.+|..+++.+........ ....... .+..|++++.+|.|+++|..+++.+..+..+..++..--...+
T Consensus 288 ~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~~---- 361 (377)
T TIGR03300 288 DGVVVALDRRSGSELWKNDELKYRQLTAPAV--VGGYLVVGDFEGYLHWLSREDGSFVARLKTDGSGIASPPVVVG---- 361 (377)
T ss_pred CCeEEEEECCCCcEEEccccccCCccccCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCccccCCEEEC----
Confidence 99999999999987765532211 2222222 3668899999999999999999999888766544322211222
Q ss_pred CCCCccEEEEeecCceEEE
Q 010754 456 NNPNQQLILARLIPYFLYW 474 (502)
Q Consensus 456 ~~~~~~l~las~~~~~~iw 474 (502)
..+++++.++.+..+
T Consensus 362 ----~~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 362 ----DGLLVQTRDGDLYAF 376 (377)
T ss_pred ----CEEEEEeCCceEEEe
Confidence 257889888877654
No 297
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=98.69 E-value=7.1e-06 Score=81.72 Aligned_cols=121 Identities=14% Similarity=0.171 Sum_probs=77.8
Q ss_pred CCceEEeccCCCceEEEEEcCCC------------CeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCcccc
Q 010754 205 NSDVTILEGHTSEVCACAWSPAG------------SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNE 272 (502)
Q Consensus 205 ~~~~~~l~~H~~~V~~~~~~p~~------------~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (502)
-+.++.+.-|...|+.+.|.|-. -+||++...|.|.+||+..+..+. ....
T Consensus 45 ~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~-----------------~l~~ 107 (1062)
T KOG1912|consen 45 LQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVIN-----------------WLSH 107 (1062)
T ss_pred hhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhh-----------------hhcC
Confidence 34567788899999999998731 157777788999999988765332 2234
Q ss_pred CCCCeEEEEECC---CC-CEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEec-CCCEEEEEecCCeEEEE
Q 010754 273 KSKDVTTLDWNG---EG-TLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVW 342 (502)
Q Consensus 273 ~~~~v~~l~~s~---~g-~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~-~~~~l~s~~~d~~i~~w 342 (502)
+...+..++|-+ +. ..|++-.....|.+|+.. |..............|+.+.| +.+.+..-+..|.+.+-
T Consensus 108 ~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~ 183 (1062)
T KOG1912|consen 108 SNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSC 183 (1062)
T ss_pred CCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEE
Confidence 456778888865 33 356666667899999755 444444444444555566666 33444444444444444
No 298
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.69 E-value=1.8e-06 Score=81.95 Aligned_cols=216 Identities=17% Similarity=0.232 Sum_probs=145.6
Q ss_pred CCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEEC
Q 010754 215 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY 294 (502)
Q Consensus 215 ~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~ 294 (502)
.-++..++|||.|.+|++... ..|.+|.-....... .+. ...|..+.|+|.+++|.+-+.
T Consensus 32 ~~p~~~~~~SP~G~~l~~~~~-~~V~~~~g~~~~~l~----------~~~---------~~~V~~~~fSP~~kYL~tw~~ 91 (561)
T COG5354 32 NWPVAYVSESPLGTYLFSEHA-AGVECWGGPSKAKLV----------RFR---------HPDVKYLDFSPNEKYLVTWSR 91 (561)
T ss_pred CcchhheeecCcchheehhhc-cceEEccccchhhee----------eee---------cCCceecccCcccceeeeecc
Confidence 356788999999999998876 458999866543111 111 246999999999999998765
Q ss_pred CC---------------eEEEEECC-CceEEEecCccCC--eE-EEEEecCCCEEEEEecCCeEEEEEcCCCceEE-EEe
Q 010754 295 DG---------------QARIWSTN-GDLKCTLSKHKGP--IF-SLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQ-QFE 354 (502)
Q Consensus 295 dg---------------~i~iwd~~-~~~~~~~~~~~~~--v~-~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~-~~~ 354 (502)
-+ .+.+||.. +..+..+.....+ .+ -++|+-+.++++-. ....++++++ +..... -+.
T Consensus 92 ~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e~-t~n~~~~p~~ 169 (561)
T COG5354 92 EPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARV-VGSSLYIHEI-TDNIEEHPFK 169 (561)
T ss_pred CCccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhh-ccCeEEEEec-CCccccCchh
Confidence 43 48999976 4556666665555 55 78899888877654 4557999997 433211 111
Q ss_pred e-ccCCeEEEEecCCC---EEEE-----EeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEe--------
Q 010754 355 F-HSGPTLDVDWRNNV---SFAT-----SSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS-------- 417 (502)
Q Consensus 355 ~-~~~~v~~v~~~~~~---~~~~-----~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s-------- 417 (502)
. ....+.+..|+|.+ .|+. .+..+.+++|.+..+..+.+-.-....=..+.|.+.|++|+.--
T Consensus 170 ~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnK 249 (561)
T COG5354 170 NLRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNK 249 (561)
T ss_pred hccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeeccc
Confidence 1 23457778887762 1332 35678899999998776654433333345788999998865421
Q ss_pred ---CCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCC
Q 010754 418 ---DDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 418 ---~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
....++|+++....+- ....-.++|...+|.|.++
T Consensus 250 syfgesnLyl~~~~e~~i~-V~~~~~~pVhdf~W~p~S~ 287 (561)
T COG5354 250 SYFGESNLYLLRITERSIP-VEKDLKDPVHDFTWEPLSS 287 (561)
T ss_pred ceeccceEEEEeecccccc-eeccccccceeeeecccCC
Confidence 1246888888744332 2225678999999999998
No 299
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=98.69 E-value=1.6e-06 Score=86.92 Aligned_cols=107 Identities=25% Similarity=0.428 Sum_probs=82.8
Q ss_pred EEEEcCCCCeEEEEeC----CCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECC
Q 010754 220 ACAWSPAGSLLASGSG----DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 295 (502)
Q Consensus 220 ~~~~~p~~~~l~sgs~----dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~d 295 (502)
-..|+|...+||.++- .|.|.||- .+|..... . .-.-.+++++|+|..-.|+.|-.-
T Consensus 20 i~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~-------------V-----t~P~hatSLCWHpe~~vLa~gwe~ 80 (1416)
T KOG3617|consen 20 ISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRD-------------V-----TYPVHATSLCWHPEEFVLAQGWEM 80 (1416)
T ss_pred ccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCcc-------------c-----ccceehhhhccChHHHHHhhcccc
Confidence 4589999999988863 47788874 33332110 0 001237789999998899999999
Q ss_pred CeEEEEECCCceEE-EecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcC
Q 010754 296 GQARIWSTNGDLKC-TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK 345 (502)
Q Consensus 296 g~i~iwd~~~~~~~-~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~ 345 (502)
|.+.+|..+..... ....|+.+|..+.|+++|+.++++..-|.|.+|...
T Consensus 81 g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 81 GVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred ceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 99999998765544 445799999999999999999999999999999764
No 300
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=98.68 E-value=4.2e-06 Score=87.50 Aligned_cols=239 Identities=13% Similarity=0.217 Sum_probs=150.3
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECC
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 295 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~d 295 (502)
+.|.++.|.-++.-++.+..+|.|.+-|.++..... .+ .-...|.+++||||+..++..+..
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~ei---------------vg---~vd~GI~aaswS~Dee~l~liT~~ 130 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITALGDIILVDPETLELEI---------------VG---NVDNGISAASWSPDEELLALITGR 130 (1265)
T ss_pred cceEEEEEecccceEEEEecCCcEEEEcccccceee---------------ee---eccCceEEEeecCCCcEEEEEeCC
Confidence 678999999999888889999999999877654210 01 114569999999999999999988
Q ss_pred CeEEEEECC------C------------------ceEEEecC---------------------ccCCeEEEEEecCCCEE
Q 010754 296 GQARIWSTN------G------------------DLKCTLSK---------------------HKGPIFSLKWNKKGDYL 330 (502)
Q Consensus 296 g~i~iwd~~------~------------------~~~~~~~~---------------------~~~~v~~l~~~~~~~~l 330 (502)
+++.+.+-. . +....+.+ ..+.=+++.|--+|.++
T Consensus 131 ~tll~mT~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~f 210 (1265)
T KOG1920|consen 131 QTLLFMTKDFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYF 210 (1265)
T ss_pred cEEEEEeccccchhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEE
Confidence 888776421 0 00011111 11112458999999999
Q ss_pred EEEe----cC-CeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEEEE----eCCCeEEEEEcCCCc---ceEEEecCC
Q 010754 331 LTGS----CD-KTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATS----STDNMIYVCKIGENR---PIKTFAGHQ 398 (502)
Q Consensus 331 ~s~~----~d-~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~----~~d~~i~i~d~~~~~---~~~~~~~h~ 398 (502)
++.. .+ +.|++||-. |..-..-....+.-.+++|.|.+.++++ +.|+.|.+|.-+.-. ..-.+....
T Consensus 211 AVs~~~~~~~~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de 289 (1265)
T KOG1920|consen 211 AVSFVESETGTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDE 289 (1265)
T ss_pred EEEEEeccCCceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccc
Confidence 9832 23 799999966 5433332333344567899886654433 356678888754321 122233333
Q ss_pred CcEEEEEEcCCCCEEEE---EeCCCcEEEEECCCCeeE--EEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCc--e
Q 010754 399 GEVNCVKWDPTGSLLAS---CSDDVTAKIWNMKQDKYV--HDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPY--F 471 (502)
Q Consensus 399 ~~i~~l~~sp~g~~las---~s~dg~i~iwd~~~~~~~--~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~--~ 471 (502)
..|..++|+.++..||. +.....|++|-+.+.... ..+...... -+.|+|.-. ..+.+-.-++. +
T Consensus 290 ~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~NyhWYLKq~l~~~~~~--~~~W~p~~~------~~L~v~~~sG~~~v 361 (1265)
T KOG1920|consen 290 KEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNYHWYLKQELQFSQKA--LLMWDPVTE------KTLHVLRESGQRLV 361 (1265)
T ss_pred cchheeeecCCCCceeeeecccccceEEEEEecCeEEEEEEEEeccccc--cccccCCCc------eeEEEEecCCcEEE
Confidence 45899999999999987 444555999998775432 222222222 288999543 33444433444 5
Q ss_pred EEEEeeeEEE
Q 010754 472 LYWICSIYFK 481 (502)
Q Consensus 472 ~iw~~~~~~~ 481 (502)
+-|.+...++
T Consensus 362 ~~~~~~t~~s 371 (1265)
T KOG1920|consen 362 RDFAWTTDRS 371 (1265)
T ss_pred EEEEEeeecc
Confidence 5555666663
No 301
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=98.68 E-value=3.2e-06 Score=73.85 Aligned_cols=183 Identities=9% Similarity=0.049 Sum_probs=127.8
Q ss_pred eEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCCc--
Q 010754 229 LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD-- 306 (502)
Q Consensus 229 ~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~-- 306 (502)
.+..++.|.++++.+++.+...... +.. .-.+.+++++++++++++.+....|..|.++..
T Consensus 130 ~~~i~sndht~k~~~~~~~s~~~~~---------------h~~--~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~se 192 (344)
T KOG4532|consen 130 PLNIASNDHTGKTMVVSGDSNKFAV---------------HNQ--NLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESE 192 (344)
T ss_pred ceeeccCCcceeEEEEecCccccee---------------ecc--ccceeeeEEcCCCceEEEecCCCcceEEEeCCccc
Confidence 4677788999999988765421100 000 123789999999999999999999999987632
Q ss_pred -eEE-EecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEE-----EeeccCCeEEEEecCCC---EEEEEeC
Q 010754 307 -LKC-TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQ-----FEFHSGPTLDVDWRNNV---SFATSST 376 (502)
Q Consensus 307 -~~~-~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~-----~~~~~~~v~~v~~~~~~---~~~~~~~ 376 (502)
... ........-.+..|+.....++++..||++.|||++....... -..|.+.+..+.|++.+ .++..-.
T Consensus 193 y~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEh 272 (344)
T KOG4532|consen 193 YIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEH 272 (344)
T ss_pred eeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecC
Confidence 222 2333444557889999999999999999999999987654332 23478889999998643 3555566
Q ss_pred CCeEEEEEcCCCcceEEEe-------cCC-CcEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 010754 377 DNMIYVCKIGENRPIKTFA-------GHQ-GEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ 429 (502)
Q Consensus 377 d~~i~i~d~~~~~~~~~~~-------~h~-~~i~~l~~sp~g~~las~s~dg~i~iwd~~~ 429 (502)
-+.+.+.|+++.+..+.+. .|. ..|..-.|+.++.-+.+.+++. +.=|++.+
T Consensus 273 fs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v~~e~~-~ae~ni~s 332 (344)
T KOG4532|consen 273 FSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENESNDVKNELQ-GAEYNILS 332 (344)
T ss_pred cceEEEEEcccCceeeEEecCccccccccccccccccccCCCcccccccchh-hheeeccc
Confidence 7889999999987554433 232 2377778887777666666553 45566554
No 302
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=98.62 E-value=1.3e-07 Score=81.86 Aligned_cols=145 Identities=17% Similarity=0.246 Sum_probs=96.9
Q ss_pred CCCEEEEEECCCeEEEEECCCce--EEEecCccCCeEEEEEecCCCEEEEEec-----CCeEEEEEcCCCceEEEEeecc
Q 010754 285 EGTLLATGSYDGQARIWSTNGDL--KCTLSKHKGPIFSLKWNKKGDYLLTGSC-----DKTAIVWDVKTEEWKQQFEFHS 357 (502)
Q Consensus 285 ~g~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~v~~l~~~~~~~~l~s~~~-----d~~i~~wd~~~~~~~~~~~~~~ 357 (502)
-++-+++++.||.+.+++.+... ..........-.+.++...++.+.++.. -+..+.|+++..+.+..-....
T Consensus 100 ~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~~~ 179 (319)
T KOG4714|consen 100 TDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSKKAL 179 (319)
T ss_pred cCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeeccceeeeccccccccccccccc
Confidence 45678999999999999976411 1111111112233444445555555432 2345666665433322222223
Q ss_pred CCeEEEEecC--CCEEEEEeCCCeEEEEEcCCCc-ceEEEecCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEECCC
Q 010754 358 GPTLDVDWRN--NVSFATSSTDNMIYVCKIGENR-PIKTFAGHQGEVNCVKWDP-TGSLLASCSDDVTAKIWNMKQ 429 (502)
Q Consensus 358 ~~v~~v~~~~--~~~~~~~~~d~~i~i~d~~~~~-~~~~~~~h~~~i~~l~~sp-~g~~las~s~dg~i~iwd~~~ 429 (502)
..|.+++-+| ...+++|+.||.+-+||.++.. ++..+..|+.+|+.+-|+| ++..|+++++||.+.-||..+
T Consensus 180 ~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 180 DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred ccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 3477777655 4568889999999999999874 5667789999999999999 467899999999999999764
No 303
>KOG2066 consensus Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.59 E-value=4.6e-06 Score=83.50 Aligned_cols=138 Identities=19% Similarity=0.340 Sum_probs=100.8
Q ss_pred CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC-----CCEEEEEECCCeEEE
Q 010754 226 AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE-----GTLLATGSYDGQARI 300 (502)
Q Consensus 226 ~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~-----g~~l~s~~~dg~i~i 300 (502)
+|.+++|||.||+|.|-.+-+.+.... . ....++.+++++|+ .+.+++|+.-| +.+
T Consensus 82 ~Gey~asCS~DGkv~I~sl~~~~~~~~--------~----------df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL 142 (846)
T KOG2066|consen 82 EGEYVASCSDDGKVVIGSLFTDDEITQ--------Y----------DFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVL 142 (846)
T ss_pred CCceEEEecCCCcEEEeeccCCcccee--------E----------ecCCcceeEEeccchhhhhhhheeecCcce-EEE
Confidence 489999999999999998877653211 0 11346899999997 56899999888 777
Q ss_pred EECC---CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCC------eEEEEecCCCEE
Q 010754 301 WSTN---GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP------TLDVDWRNNVSF 371 (502)
Q Consensus 301 wd~~---~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~------v~~v~~~~~~~~ 371 (502)
+..+ ......+....++|.+++|. |++++=++ |--|++||+.+++.+..+...... ...+.|.++..+
T Consensus 143 ~er~wlgnk~~v~l~~~eG~I~~i~W~--g~lIAWan-d~Gv~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~L 219 (846)
T KOG2066|consen 143 SERNWLGNKDSVVLSEGEGPIHSIKWR--GNLIAWAN-DDGVKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDRL 219 (846)
T ss_pred ehhhhhcCccceeeecCccceEEEEec--CcEEEEec-CCCcEEEeccccceeeccCCCCCCCCcccCCCceEecCCCeE
Confidence 7643 22233567778999999996 56666665 445999999998887776654332 345788888888
Q ss_pred EEEeCCCeEEEEEcC
Q 010754 372 ATSSTDNMIYVCKIG 386 (502)
Q Consensus 372 ~~~~~d~~i~i~d~~ 386 (502)
+.|- ..+|.|+.++
T Consensus 220 VIGW-~d~v~i~~I~ 233 (846)
T KOG2066|consen 220 VIGW-GDSVKICSIK 233 (846)
T ss_pred EEec-CCeEEEEEEe
Confidence 7764 4567888877
No 304
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=98.57 E-value=1.4e-06 Score=88.05 Aligned_cols=179 Identities=17% Similarity=0.243 Sum_probs=128.9
Q ss_pred CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCC
Q 010754 226 AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG 305 (502)
Q Consensus 226 ~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~ 305 (502)
++..++.|+.-..+..+|+.+.+..... ......|+-|+. +++++.+|...|+|.+-|.+.
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~-----------------~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s 206 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKETRTT-----------------NVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPNS 206 (1118)
T ss_pred CCcceeecchhhheeeeecccceeeeee-----------------eccCCceEEEEe--cCcEEEeecccceEEeecCCc
Confidence 3455667766667777887765432110 111223666654 578999999999999999874
Q ss_pred -ceEEEecCccCCeEEEEEecCCCEEEEEec---------CCeEEEEEcCCCceEEEEeeccCCeEEEEecC--CCEEEE
Q 010754 306 -DLKCTLSKHKGPIFSLKWNKKGDYLLTGSC---------DKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN--NVSFAT 373 (502)
Q Consensus 306 -~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~---------d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~~ 373 (502)
+.+.++..|.+.|..+.. .|+.|++|+. |..|+|||++..+.+.-+..+.++ .-+.|.| ...+++
T Consensus 207 ~~~iht~~aHs~siSDfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P-~flrf~Psl~t~~~V 283 (1118)
T KOG1275|consen 207 FETIHTFDAHSGSISDFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGP-QFLRFHPSLTTRLAV 283 (1118)
T ss_pred Cceeeeeeccccceeeeec--cCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCc-hhhhhcccccceEEE
Confidence 778899999999987655 5899999875 456899999988776655555544 2234444 456888
Q ss_pred EeCCCeEEEEEc---CCCc-ceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 010754 374 SSTDNMIYVCKI---GENR-PIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWN 426 (502)
Q Consensus 374 ~~~d~~i~i~d~---~~~~-~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd 426 (502)
++..|...+.|. .+.. .+..+......+.++.++++|+.+|.|..+|.|.+|-
T Consensus 284 ~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 284 TSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred EecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 899999999993 3321 1233333345699999999999999999999999997
No 305
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=98.52 E-value=9.4e-08 Score=95.89 Aligned_cols=172 Identities=18% Similarity=0.390 Sum_probs=127.2
Q ss_pred cCCCCeEEEEECCCCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCC--eEEEEEcCC-C
Q 010754 272 EKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDK--TAIVWDVKT-E 347 (502)
Q Consensus 272 ~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~--~i~~wd~~~-~ 347 (502)
.+....+|++|+.+.++|++|+..|.|++|++. |.......+|.++|+.+.-+.+|..+++.+.-. -..+|++.+ +
T Consensus 1099 d~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~ 1178 (1516)
T KOG1832|consen 1099 DETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASSTG 1178 (1516)
T ss_pred ccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhcccccc
Confidence 445779999999999999999999999999976 555667889999999999999998888765543 477999853 4
Q ss_pred ceEEEEeeccCCeEEEEecCCCEE-EEEeCCCeEEEEEcCCCcceEEEe-c---CCCcEEEEEEcCCCCEEEEEeCCCcE
Q 010754 348 EWKQQFEFHSGPTLDVDWRNNVSF-ATSSTDNMIYVCKIGENRPIKTFA-G---HQGEVNCVKWDPTGSLLASCSDDVTA 422 (502)
Q Consensus 348 ~~~~~~~~~~~~v~~v~~~~~~~~-~~~~~d~~i~i~d~~~~~~~~~~~-~---h~~~i~~l~~sp~g~~las~s~dg~i 422 (502)
...++|. .-.++.|+....+ +.|+......+||+.++.++.++- + ....-++..|+|+..+++ .||.
T Consensus 1179 ~~~Hsf~----ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIl---ndGv- 1250 (1516)
T KOG1832|consen 1179 GPRHSFD----EDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLIL---NDGV- 1250 (1516)
T ss_pred Ccccccc----ccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEe---eCce-
Confidence 4555554 2346777665442 344455678899999998877742 2 122346788999998876 4664
Q ss_pred EEEECCCCeeEEEeccCCCcEEEEEEccCCC
Q 010754 423 KIWNMKQDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 423 ~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
+||++..+.++.|...+..+ .-.|+|.|.
T Consensus 1251 -LWDvR~~~aIh~FD~ft~~~-~G~FHP~g~ 1279 (1516)
T KOG1832|consen 1251 -LWDVRIPEAIHRFDQFTDYG-GGGFHPSGN 1279 (1516)
T ss_pred -eeeeccHHHHhhhhhheecc-cccccCCCc
Confidence 79999988888776544322 235999988
No 306
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.51 E-value=0.00014 Score=64.83 Aligned_cols=188 Identities=16% Similarity=0.184 Sum_probs=119.0
Q ss_pred EEECCCCCEEEEEECCCeEEEEECCC---ceEEE---ecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEE
Q 010754 280 LDWNGEGTLLATGSYDGQARIWSTNG---DLKCT---LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 353 (502)
Q Consensus 280 l~~s~~g~~l~s~~~dg~i~iwd~~~---~~~~~---~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~ 353 (502)
++.+.+|++||+.- |..|.|-..+. ..+.. .......=..++|+||+..|+.+...|+|++||+.... +..+
T Consensus 3 ~~~~~~Gk~lAi~q-d~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~-lf~I 80 (282)
T PF15492_consen 3 LALSSDGKLLAILQ-DQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSE-LFVI 80 (282)
T ss_pred eeecCCCcEEEEEe-ccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccce-eEEc
Confidence 45678888877654 67777776442 12111 12222335779999999999999999999999986533 3333
Q ss_pred eec-------cCCeEEEEecCCC-------EEEEEeCCCeEEEEEcCCC-----cceEEEe--c-CCCcEEEEEEcCCCC
Q 010754 354 EFH-------SGPTLDVDWRNNV-------SFATSSTDNMIYVCKIGEN-----RPIKTFA--G-HQGEVNCVKWDPTGS 411 (502)
Q Consensus 354 ~~~-------~~~v~~v~~~~~~-------~~~~~~~d~~i~i~d~~~~-----~~~~~~~--~-h~~~i~~l~~sp~g~ 411 (502)
... ...|..+.|.... .+++-.-+|.++-|-+..+ +...+|. . +...|+++.|+|..+
T Consensus 81 ~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~ 160 (282)
T PF15492_consen 81 PPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHR 160 (282)
T ss_pred CcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCC
Confidence 221 2356666664322 4677777888777765322 2223332 2 356899999999988
Q ss_pred EEEEEeC----CC-------cEEEEECCCCee---------------------EEEe--------ccCCCcEEEEEEccC
Q 010754 412 LLASCSD----DV-------TAKIWNMKQDKY---------------------VHDL--------REHSKEIYTIRWSPT 451 (502)
Q Consensus 412 ~las~s~----dg-------~i~iwd~~~~~~---------------------~~~~--------~~h~~~i~~v~~sp~ 451 (502)
+|+.|+. ++ -+.-|.+-++.+ .+.+ ......|..|..|||
T Consensus 161 LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPd 240 (282)
T PF15492_consen 161 LLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPD 240 (282)
T ss_pred EEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCCCceEEEEECCC
Confidence 8877753 11 266776533211 0000 012446999999999
Q ss_pred CCCCCCCCccEEEEeecCceEEEEe
Q 010754 452 GSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 452 g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
|+ .|+....+|.+.+|..
T Consensus 241 g~-------~La~ih~sG~lsLW~i 258 (282)
T PF15492_consen 241 GS-------LLACIHFSGSLSLWEI 258 (282)
T ss_pred CC-------EEEEEEcCCeEEEEec
Confidence 99 6677777888999853
No 307
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.51 E-value=6.8e-05 Score=68.47 Aligned_cols=187 Identities=17% Similarity=0.122 Sum_probs=118.7
Q ss_pred CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEEC-C
Q 010754 226 AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWST-N 304 (502)
Q Consensus 226 ~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~-~ 304 (502)
++..+++++.++.+..||..+++..... .+.... .. . . ...+..+++++.++.|+.+|. .
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~-----------~~~~~~---~~-~--~--~~~~~~v~v~~~~~~l~~~d~~t 95 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKTGKVLWRF-----------DLPGPI---SG-A--P--VVDGGRVYVGTSDGSLYALDAKT 95 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSEEEEEE-----------ECSSCG---GS-G--E--EEETTEEEEEETTSEEEEEETTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEe-----------eccccc---cc-e--e--eecccccccccceeeeEecccCC
Confidence 5666777789999999999888642211 111100 00 1 1 123556777778889999994 4
Q ss_pred CceEEEe-cCcc---CCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCe-----------EEEEecCCC
Q 010754 305 GDLKCTL-SKHK---GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT-----------LDVDWRNNV 369 (502)
Q Consensus 305 ~~~~~~~-~~~~---~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v-----------~~v~~~~~~ 369 (502)
+...... .... .....+.....+..++++..++.|..+|+++|+.+..+....... ..+.+. ++
T Consensus 96 G~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 174 (238)
T PF13360_consen 96 GKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVIS-DG 174 (238)
T ss_dssp SCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECC-TT
T ss_pred cceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEE-CC
Confidence 6666553 2221 111222333347889999889999999999999988887644221 233333 34
Q ss_pred EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEE
Q 010754 370 SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD 435 (502)
Q Consensus 370 ~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~ 435 (502)
.++.++.++.+..+|+.+++.+.... ...+..+ ..+.+..|+.++.++.|.+||+++++.+..
T Consensus 175 ~v~~~~~~g~~~~~d~~tg~~~w~~~--~~~~~~~-~~~~~~~l~~~~~~~~l~~~d~~tG~~~W~ 237 (238)
T PF13360_consen 175 RVYVSSGDGRVVAVDLATGEKLWSKP--ISGIYSL-PSVDGGTLYVTSSDGRLYALDLKTGKVVWQ 237 (238)
T ss_dssp EEEEECCTSSEEEEETTTTEEEEEEC--SS-ECEC-EECCCTEEEEEETTTEEEEEETTTTEEEEE
T ss_pred EEEEEcCCCeEEEEECCCCCEEEEec--CCCccCC-ceeeCCEEEEEeCCCEEEEEECCCCCEEeE
Confidence 77777777754444999998664333 2223331 346778888888999999999999987643
No 308
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.51 E-value=9e-05 Score=70.37 Aligned_cols=198 Identities=12% Similarity=0.155 Sum_probs=115.3
Q ss_pred EEEEEcCCCCeEEEEe-C-CCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE-CC
Q 010754 219 CACAWSPAGSLLASGS-G-DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS-YD 295 (502)
Q Consensus 219 ~~~~~~p~~~~l~sgs-~-dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~-~d 295 (502)
..++++|||++|+... . +..|.+.|+.+++.+..+....... .. ....-..+..+.||.++.... .+
T Consensus 108 ~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~-vy---------~t~e~~~~~~~~Dg~~~~v~~d~~ 177 (352)
T TIGR02658 108 WMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYH-IF---------PTANDTFFMHCRDGSLAKVGYGTK 177 (352)
T ss_pred ceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcE-EE---------EecCCccEEEeecCceEEEEecCC
Confidence 3679999999888776 3 6899999999887543221100000 00 001111122223333322221 12
Q ss_pred CeEEEEECCCceEEEecC-----ccCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCCc-----eEEEEee-------cc
Q 010754 296 GQARIWSTNGDLKCTLSK-----HKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEE-----WKQQFEF-------HS 357 (502)
Q Consensus 296 g~i~iwd~~~~~~~~~~~-----~~~~v~~l~~~~-~~~~l~s~~~d~~i~~wd~~~~~-----~~~~~~~-------~~ 357 (502)
|....=+ ...+.. ...+ .|.+ +|+++++... |+|.+.|+.... ....+.. ..
T Consensus 178 g~~~~~~-----~~vf~~~~~~v~~rP----~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP 247 (352)
T TIGR02658 178 GNPKIKP-----TEVFHPEDEYLINHP----AYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRP 247 (352)
T ss_pred CceEEee-----eeeecCCccccccCC----ceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCC
Confidence 2211000 001111 0122 3455 7877777666 999999964432 2222211 12
Q ss_pred CCeEEEEecCC-CEEEE-E---------eCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCC-EEEEEe-CCCcEEE
Q 010754 358 GPTLDVDWRNN-VSFAT-S---------STDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS-LLASCS-DDVTAKI 424 (502)
Q Consensus 358 ~~v~~v~~~~~-~~~~~-~---------~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~-~las~s-~dg~i~i 424 (502)
+...-++++++ +.+++ . ...+.|.++|..+.+.+..+.. ...+..|+++||++ +|++.+ .++.|.+
T Consensus 248 ~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~VsV 326 (352)
T TIGR02658 248 GGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIEL-GHEIDSINVSQDAKPLLYALSTGDKTLYI 326 (352)
T ss_pred CcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeC-CCceeeEEECCCCCeEEEEeCCCCCcEEE
Confidence 22333777654 44444 2 1225899999999999988873 45799999999999 777666 5788999
Q ss_pred EECCCCeeEEEec
Q 010754 425 WNMKQDKYVHDLR 437 (502)
Q Consensus 425 wd~~~~~~~~~~~ 437 (502)
.|..+++.+.++.
T Consensus 327 iD~~t~k~i~~i~ 339 (352)
T TIGR02658 327 FDAETGKELSSVN 339 (352)
T ss_pred EECcCCeEEeeec
Confidence 9999999999883
No 309
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=98.51 E-value=6.6e-07 Score=83.46 Aligned_cols=206 Identities=13% Similarity=0.136 Sum_probs=140.5
Q ss_pred cCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEE
Q 010754 213 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG 292 (502)
Q Consensus 213 ~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~ 292 (502)
-|.+.|+.|.-. ..+++.+++.||.++.|.-.... ...+..+...|...|.+++.+-+|.++.++
T Consensus 7 mhrd~i~hv~~t-ka~fiiqASlDGh~KFWkKs~is--------------GvEfVKhFraHL~~I~sl~~S~dg~L~~Sv 71 (558)
T KOG0882|consen 7 MHRDVITHVFPT-KAKFIIQASLDGHKKFWKKSRIS--------------GVEFVKHFRAHLGVILSLAVSYDGWLFRSV 71 (558)
T ss_pred cccceeeeEeee-hhheEEeeecchhhhhcCCCCcc--------------ceeehhhhHHHHHHHHhhhccccceeEeec
Confidence 377777776544 56799999999999999744311 112334445566778899999999999998
Q ss_pred EC-CCeEEEEECCCceEE---EecCccCCeEEEEEe-cCC---CEEEE-EecCCeEEEEEcCCCce--EEEEeeccCCeE
Q 010754 293 SY-DGQARIWSTNGDLKC---TLSKHKGPIFSLKWN-KKG---DYLLT-GSCDKTAIVWDVKTEEW--KQQFEFHSGPTL 361 (502)
Q Consensus 293 ~~-dg~i~iwd~~~~~~~---~~~~~~~~v~~l~~~-~~~---~~l~s-~~~d~~i~~wd~~~~~~--~~~~~~~~~~v~ 361 (502)
+. |..++++|+..--.. .+.-..+. +.|. ..| ..+++ .-.++.+.++|-....+ ...-..|..+|.
T Consensus 72 ~d~Dhs~KvfDvEn~DminmiKL~~lPg~---a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~ 148 (558)
T KOG0882|consen 72 EDPDHSVKVFDVENFDMINMIKLVDLPGF---AEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVK 148 (558)
T ss_pred cCcccceeEEEeeccchhhhcccccCCCc---eEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceE
Confidence 77 999999997643222 12222222 2232 223 13333 33478999999765442 233345888999
Q ss_pred EEEecC-CCEEEEEeCCCeEEEEEcCC------Ccce---------EEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Q 010754 362 DVDWRN-NVSFATSSTDNMIYVCKIGE------NRPI---------KTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIW 425 (502)
Q Consensus 362 ~v~~~~-~~~~~~~~~d~~i~i~d~~~------~~~~---------~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iw 425 (502)
.+.+.+ ...+++....|.|.-|.... .... ..+.......+++.|+|+|..+++-+.|..|+++
T Consensus 149 ~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F 228 (558)
T KOG0882|consen 149 KIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGF 228 (558)
T ss_pred EEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEE
Confidence 999866 45577777789999998763 1111 1122234568899999999999999999999999
Q ss_pred ECCCCeeEEEe
Q 010754 426 NMKQDKYVHDL 436 (502)
Q Consensus 426 d~~~~~~~~~~ 436 (502)
+.++++.++.+
T Consensus 229 ~~KtGklvqei 239 (558)
T KOG0882|consen 229 VFKTGKLVQEI 239 (558)
T ss_pred Eeccchhhhhh
Confidence 99999876555
No 310
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=98.50 E-value=4.9e-05 Score=79.83 Aligned_cols=179 Identities=17% Similarity=0.269 Sum_probs=124.5
Q ss_pred CCCeEEEEECCCCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEc----CCC--
Q 010754 274 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDV----KTE-- 347 (502)
Q Consensus 274 ~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~----~~~-- 347 (502)
...|.++.|..+++.++.+..+|.|.+-|...........-...|.+++|+|++..++..+..+++.+-+- -..
T Consensus 68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E~~ 147 (1265)
T KOG1920|consen 68 DDEIVSVQFLADTNSICVITALGDIILVDPETLELEIVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAEKP 147 (1265)
T ss_pred CcceEEEEEecccceEEEEecCCcEEEEcccccceeeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhccc
Confidence 35799999999999999999999999999887777777677889999999999999999888888877532 010
Q ss_pred -----------------ceEEEEeeccC---------------------CeEEEEecCCCE-EEEE----eCC-CeEEEE
Q 010754 348 -----------------EWKQQFEFHSG---------------------PTLDVDWRNNVS-FATS----STD-NMIYVC 383 (502)
Q Consensus 348 -----------------~~~~~~~~~~~---------------------~v~~v~~~~~~~-~~~~----~~d-~~i~i~ 383 (502)
+....|.+..+ .-+.|+|..++. |++. ..+ +.|++|
T Consensus 148 L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~ 227 (1265)
T KOG1920|consen 148 LDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVY 227 (1265)
T ss_pred cccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEEe
Confidence 11112322111 124599988875 4442 344 899999
Q ss_pred EcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEe---CCCcEEEEECC---CCeeEEEeccCCCcEEEEEEccCCC
Q 010754 384 KIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS---DDVTAKIWNMK---QDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 384 d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s---~dg~i~iwd~~---~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
|.. +..-.+-....+.-.+++|-|.|.++|+-. .|+.|.++.-+ .+.....+.....+|..++|+.++.
T Consensus 228 drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns~sd 302 (1265)
T KOG1920|consen 228 DRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNSNSD 302 (1265)
T ss_pred ccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchheeeecCCCC
Confidence 976 432222222233445799999999998864 35679999732 2333333334455699999999998
No 311
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=98.49 E-value=6.2e-06 Score=79.09 Aligned_cols=176 Identities=18% Similarity=0.303 Sum_probs=125.8
Q ss_pred CeEEEEECCCCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEec-----------CCeEEEEEc
Q 010754 276 DVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSC-----------DKTAIVWDV 344 (502)
Q Consensus 276 ~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~-----------d~~i~~wd~ 344 (502)
.-+-+.|||.|.||++--.- -|.+|--..-....-..|. .|.-+.|||+.+||+|-+. ...++|||+
T Consensus 212 Tetyv~wSP~GTYL~t~Hk~-GI~lWGG~~f~r~~RF~Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI 289 (698)
T KOG2314|consen 212 TETYVRWSPKGTYLVTFHKQ-GIALWGGESFDRIQRFYHP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDI 289 (698)
T ss_pred eeeeEEecCCceEEEEEecc-ceeeecCccHHHHHhccCC-CceeeecCCccceEEEecCCccccCcccCCCceEEEEEc
Confidence 35788999999999987664 4888964332222223454 4788999999999998653 257999999
Q ss_pred CCCceEEEEeeccCC--e-EEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCC--
Q 010754 345 KTEEWKQQFEFHSGP--T-LDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD-- 419 (502)
Q Consensus 345 ~~~~~~~~~~~~~~~--v-~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~d-- 419 (502)
++|...+.|....++ + .-+.|+.++.+++.-....|.||+..+-.++..-.-.-..|....|+|.+++||-=+..
T Consensus 290 ~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe~~ 369 (698)
T KOG2314|consen 290 ATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGNSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETN 369 (698)
T ss_pred cccchhcceeccCCCccccceEEeccCCceeEEeccceEEEEecCceeeecccccCCccccCcccCCCcceEEEEccccc
Confidence 999999988764332 2 34578888888888888999999987754433222234568888999999998865432
Q ss_pred ---CcEEEEECCCCeeEEEeccCCCcEEEEEEccCCC
Q 010754 420 ---VTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 420 ---g~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
..+.+-.+.+++.+++-..|.-.=..+.|-.+|.
T Consensus 370 ~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gd 406 (698)
T KOG2314|consen 370 NIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGD 406 (698)
T ss_pred CCcceEEEEecCccceeeeccceeeeccEEEeccCCc
Confidence 3577788888877776665554445677888776
No 312
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.48 E-value=8.4e-05 Score=73.11 Aligned_cols=215 Identities=13% Similarity=0.081 Sum_probs=129.5
Q ss_pred CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEE-EEECCCCCEEEEEECCCeEEEEECC
Q 010754 226 AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTT-LDWNGEGTLLATGSYDGQARIWSTN 304 (502)
Q Consensus 226 ~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-l~~s~~g~~l~s~~~dg~i~iwd~~ 304 (502)
++..++.++.++.+..+|..+++........ ..+.+ ... .+..++.++.+|.|..||.+
T Consensus 104 ~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~------------------~~~~~~p~v--~~~~v~v~~~~g~l~a~d~~ 163 (377)
T TIGR03300 104 DGGLVFVGTEKGEVIALDAEDGKELWRAKLS------------------SEVLSPPLV--ANGLVVVRTNDGRLTALDAA 163 (377)
T ss_pred cCCEEEEEcCCCEEEEEECCCCcEeeeeccC------------------ceeecCCEE--ECCEEEEECCCCeEEEEEcC
Confidence 4667788888999999999887643211110 11111 011 24567778889999999975
Q ss_pred -CceEEEecCccCCe-----EEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccC----C---eEEEE---ecCC
Q 010754 305 -GDLKCTLSKHKGPI-----FSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSG----P---TLDVD---WRNN 368 (502)
Q Consensus 305 -~~~~~~~~~~~~~v-----~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~----~---v~~v~---~~~~ 368 (502)
++.+.........+ .+.... +..++.+..++.+..+|..+|+.+........ . ...+. ...+
T Consensus 164 tG~~~W~~~~~~~~~~~~~~~sp~~~--~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~ 241 (377)
T TIGR03300 164 TGERLWTYSRVTPALTLRGSASPVIA--DGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDG 241 (377)
T ss_pred CCceeeEEccCCCceeecCCCCCEEE--CCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEEC
Confidence 55544443322111 111111 24677888899999999999987655432110 0 00010 1125
Q ss_pred CEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCc-EEEEE
Q 010754 369 VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKE-IYTIR 447 (502)
Q Consensus 369 ~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~-i~~v~ 447 (502)
+.+++++.+|.++.+|..+++.+...... ....... .+..++.++.||.|..+|..+++.+......... ..+..
T Consensus 242 ~~vy~~~~~g~l~a~d~~tG~~~W~~~~~--~~~~p~~--~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~ 317 (377)
T TIGR03300 242 GQVYAVSYQGRVAALDLRSGRVLWKRDAS--SYQGPAV--DDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAPA 317 (377)
T ss_pred CEEEEEEcCCEEEEEECCCCcEEEeeccC--CccCceE--eCCEEEEECCCCeEEEEECCCCcEEEccccccCCccccCE
Confidence 67788888999999999999877665421 1222222 4667888889999999999999887655321111 11111
Q ss_pred EccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 448 WSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 448 ~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
. .+ ..+++++.++.+.++.
T Consensus 318 i--~g-------~~l~~~~~~G~l~~~d 336 (377)
T TIGR03300 318 V--VG-------GYLVVGDFEGYLHWLS 336 (377)
T ss_pred E--EC-------CEEEEEeCCCEEEEEE
Confidence 1 12 3667777777777765
No 313
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.48 E-value=5.3e-05 Score=76.73 Aligned_cols=190 Identities=12% Similarity=0.184 Sum_probs=127.9
Q ss_pred EEeccCCCceEEEEEcCCC-CeEEEEeCCCc-----EEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEE
Q 010754 209 TILEGHTSEVCACAWSPAG-SLLASGSGDST-----ARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW 282 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~~-~~l~sgs~dg~-----v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~ 282 (502)
+-++.|...|...-|.-++ .+|++.+.|+. ++||+++....... |......+...........++.+++.
T Consensus 58 ~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~s----P~c~~~~ri~~~~np~~~~p~s~l~V 133 (933)
T KOG2114|consen 58 RGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNS----PQCLYEHRIFTIKNPTNPSPASSLAV 133 (933)
T ss_pred ehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCC----cceeeeeeeeccCCCCCCCcceEEEE
Confidence 4567777774444444444 68888877654 99999987542110 11111112222222234678999999
Q ss_pred CCCCCEEEEEECCCeEEEEECC-----CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCce-EEEEeec
Q 010754 283 NGEGTLLATGSYDGQARIWSTN-----GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEW-KQQFEFH 356 (502)
Q Consensus 283 s~~g~~l~s~~~dg~i~iwd~~-----~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~-~~~~~~~ 356 (502)
+.+-+.+|+|-.+|.|..+.-+ +...........+|+++.+..++..++-+.....|.+|.+....+ ...+..+
T Consensus 134 s~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~ 213 (933)
T KOG2114|consen 134 SEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDNN 213 (933)
T ss_pred EccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEecCCCcceeeeccC
Confidence 9999999999999999998521 233333345678999999999888755555667899999874442 4446778
Q ss_pred cCCeEEEEecCCCE-EEEEeCCCeEEEEEcCCCcceEEEe-cCCCcEEE
Q 010754 357 SGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFA-GHQGEVNC 403 (502)
Q Consensus 357 ~~~v~~v~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~-~h~~~i~~ 403 (502)
..++.+..+++... |+++ .+..+.+|+....++...|. ||......
T Consensus 214 G~~lnCss~~~~t~qfIca-~~e~l~fY~sd~~~~cfaf~~g~kk~~~~ 261 (933)
T KOG2114|consen 214 GISLNCSSFSDGTYQFICA-GSEFLYFYDSDGRGPCFAFEVGEKKEMLV 261 (933)
T ss_pred CccceeeecCCCCccEEEe-cCceEEEEcCCCcceeeeecCCCeEEEEE
Confidence 88888888877766 5554 55679999998888877887 76654433
No 314
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=98.46 E-value=2.6e-06 Score=79.63 Aligned_cols=212 Identities=15% Similarity=0.138 Sum_probs=147.1
Q ss_pred eEEeccCCCceEEEEEcCCCCeEEEEeC-CCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 208 VTILEGHTSEVCACAWSPAGSLLASGSG-DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~l~sgs~-dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
+..+..|-+.|.+++.+-++-++.|++. |..++++|+.+-.....+....+ .+.+. ...++..
T Consensus 46 VKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~l---------------Pg~a~-wv~skGd 109 (558)
T KOG0882|consen 46 VKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLVDL---------------PGFAE-WVTSKGD 109 (558)
T ss_pred hhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccchhhhcccccC---------------CCceE-EecCCCC
Confidence 4566789999999999999999999888 99999999987654322211110 11111 1112211
Q ss_pred --CEEEEE-ECCCeEEEEECCCc---eEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCC-Cc-----eEEE--
Q 010754 287 --TLLATG-SYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT-EE-----WKQQ-- 352 (502)
Q Consensus 287 --~~l~s~-~~dg~i~iwd~~~~---~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~-~~-----~~~~-- 352 (502)
..|+++ -.+|.|.|+|-.+. ....-.-|..+|.++.+++-+..+++....|.|.-|.... .+ ....
T Consensus 110 ~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K 189 (558)
T KOG0882|consen 110 KISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELK 189 (558)
T ss_pred eeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCcccccccccc
Confidence 133333 35689999996543 3334456999999999999999999999999999998762 11 1111
Q ss_pred -------EeeccCCeEEEEecCCCE-EEEEeCCCeEEEEEcCCCcceEEEe-----------------------------
Q 010754 353 -------FEFHSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFA----------------------------- 395 (502)
Q Consensus 353 -------~~~~~~~v~~v~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~----------------------------- 395 (502)
+.-......++.+++.+. +.+-+.|..|++++..+++.++.+.
T Consensus 190 ~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaver 269 (558)
T KOG0882|consen 190 HETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVER 269 (558)
T ss_pred ccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHh
Confidence 111234567888877654 6777899999999999887554332
Q ss_pred ---cCC-CcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q 010754 396 ---GHQ-GEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDL 436 (502)
Q Consensus 396 ---~h~-~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~ 436 (502)
.|. ..-+.+.|+..|++|+-|+-=| |++.++.++.+++.+
T Consensus 270 elek~~~~~~~~~~fdes~~flly~t~~g-ikvin~~tn~v~ri~ 313 (558)
T KOG0882|consen 270 ELEKHGSTVGTNAVFDESGNFLLYGTILG-IKVINLDTNTVVRIL 313 (558)
T ss_pred hHhhhcCcccceeEEcCCCCEEEeeccee-EEEEEeecCeEEEEe
Confidence 121 1235678999999999998877 899999999887765
No 315
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.45 E-value=9.8e-05 Score=67.42 Aligned_cols=177 Identities=14% Similarity=0.121 Sum_probs=112.8
Q ss_pred CCCEEEEEECCCeEEEEEC-CCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEE-eeccCC---
Q 010754 285 EGTLLATGSYDGQARIWST-NGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF-EFHSGP--- 359 (502)
Q Consensus 285 ~g~~l~s~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~-~~~~~~--- 359 (502)
++..+++++.++.|..||. .++.+..... ...+.... ...+..+++++.++.++.+|..+|+.+... ......
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~-~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~ 112 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKTGKVLWRFDL-PGPISGAP-VVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGV 112 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSEEEEEEEC-SSCGGSGE-EEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCST
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEeec-ccccccee-eecccccccccceeeeEecccCCcceeeeecccccccccc
Confidence 5667888899999999997 5666665554 22222211 224566777778899999999999998884 322111
Q ss_pred --eEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCc----------EEEEEEcCCCCEEEEEeCCCc-EEEEE
Q 010754 360 --TLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGE----------VNCVKWDPTGSLLASCSDDVT-AKIWN 426 (502)
Q Consensus 360 --v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~----------i~~l~~sp~g~~las~s~dg~-i~iwd 426 (502)
....... +..++++..++.|+.+|..+++.+..+...... +.+-....++ .+..++.+|. +.+ |
T Consensus 113 ~~~~~~~~~-~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~-d 189 (238)
T PF13360_consen 113 RSSSSPAVD-GDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAV-D 189 (238)
T ss_dssp B--SEEEEE-TTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEE-E
T ss_pred ccccCceEe-cCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEECC-EEEEEcCCCeEEEE-E
Confidence 1111222 667888888999999999999998888764422 1222222345 7777777775 555 9
Q ss_pred CCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 427 MKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 427 ~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
+.+++.+.... ...+..+ ..+++. .+++++.++.+..|+.
T Consensus 190 ~~tg~~~w~~~--~~~~~~~-~~~~~~-------~l~~~~~~~~l~~~d~ 229 (238)
T PF13360_consen 190 LATGEKLWSKP--ISGIYSL-PSVDGG-------TLYVTSSDGRLYALDL 229 (238)
T ss_dssp TTTTEEEEEEC--SS-ECEC-EECCCT-------EEEEEETTTEEEEEET
T ss_pred CCCCCEEEEec--CCCccCC-ceeeCC-------EEEEEeCCCEEEEEEC
Confidence 99999665333 2223322 334444 5666666777777753
No 316
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=98.43 E-value=1.4e-06 Score=75.71 Aligned_cols=162 Identities=13% Similarity=0.145 Sum_probs=99.4
Q ss_pred EecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCce-EEEEeeccCCeEEEEecCCCEEEEEeCCC------eEEE
Q 010754 310 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEW-KQQFEFHSGPTLDVDWRNNVSFATSSTDN------MIYV 382 (502)
Q Consensus 310 ~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~-~~~~~~~~~~v~~v~~~~~~~~~~~~~d~------~i~i 382 (502)
.+..|..+-.+-..+-.++.++++..||.+.+++.+.-.. .+.+........+.++.....++..+.=| ..+.
T Consensus 84 ~~a~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a 163 (319)
T KOG4714|consen 84 VLAKNSEIDPNDACTMTDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYA 163 (319)
T ss_pred eeeccCCCCCcccccccCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeeccceee
Confidence 3334444433333344567899999999999999765211 11111111112222222223344333333 3455
Q ss_pred EEcCCCcceEEEecCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCeeE-EEeccCCCcEEEEEEccCCCCCCCCCc
Q 010754 383 CKIGENRPIKTFAGHQGEVNCVKWDPTG-SLLASCSDDVTAKIWNMKQDKYV-HDLREHSKEIYTIRWSPTGSGTNNPNQ 460 (502)
Q Consensus 383 ~d~~~~~~~~~~~~h~~~i~~l~~sp~g-~~las~s~dg~i~iwd~~~~~~~-~~~~~h~~~i~~v~~sp~g~~~~~~~~ 460 (502)
|+++..+.+..-......|++++-+|.. .++++|+.||.+-+||.++.... ..+++|..+|+.+-|+|... .
T Consensus 164 ~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p------~ 237 (319)
T KOG4714|consen 164 NTLDPIKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNP------E 237 (319)
T ss_pred ecccccccccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCc------h
Confidence 5554433221111123349999999965 46677888999999999987544 45569999999999999876 5
Q ss_pred cEEEEeecCceEEEEee
Q 010754 461 QLILARLIPYFLYWICS 477 (502)
Q Consensus 461 ~l~las~~~~~~iw~~~ 477 (502)
.|++++.||.+-.|+-+
T Consensus 238 ~Lft~sedGslw~wdas 254 (319)
T KOG4714|consen 238 HLFTCSEDGSLWHWDAS 254 (319)
T ss_pred heeEecCCCcEEEEcCC
Confidence 78999999988878655
No 317
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.41 E-value=0.00031 Score=64.49 Aligned_cols=169 Identities=12% Similarity=0.086 Sum_probs=109.2
Q ss_pred EEEECC-CCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEe-cCCCEEEEEecCCeEEEEEcCCCceEEEEee-
Q 010754 279 TLDWNG-EGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWN-KKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF- 355 (502)
Q Consensus 279 ~l~~s~-~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~-~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~- 355 (502)
++.|.+ ++.++++-...+.|..|+..+.....+.... ...+++. ++ ..|+.+... .+.++|..+++.......
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~~~~~~--~~G~~~~~~~-g~l~v~~~~-~~~~~d~~~g~~~~~~~~~ 79 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEVIDLPG--PNGMAFDRPD-GRLYVADSG-GIAVVDPDTGKVTVLADLP 79 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEESSS--EEEEEEECTT-SEEEEEETT-CEEEEETTTTEEEEEEEEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEEEecCC--CceEEEEccC-CEEEEEEcC-ceEEEecCCCcEEEEeecc
Confidence 577888 6777777667899999999887665544333 6778888 55 555555554 455559998876555544
Q ss_pred ----ccCCeEEEEecCCCEEEEEeC-C--------CeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEE-EEeCCCc
Q 010754 356 ----HSGPTLDVDWRNNVSFATSST-D--------NMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLA-SCSDDVT 421 (502)
Q Consensus 356 ----~~~~v~~v~~~~~~~~~~~~~-d--------~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~la-s~s~dg~ 421 (502)
......++.+.+++.+..+.. . |.|+.++.. ++.. .+...-...+.|+|+|+++.|+ +-+..+.
T Consensus 80 ~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~-~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~ 157 (246)
T PF08450_consen 80 DGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVT-VVADGLGFPNGIAFSPDGKTLYVADSFNGR 157 (246)
T ss_dssp TTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEE-EEEEEESSEEEEEEETTSSEEEEEETTTTE
T ss_pred CCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEE-EEecCcccccceEECCcchheeecccccce
Confidence 233578889988776655543 2 457777776 4433 3333456688999999999775 5566788
Q ss_pred EEEEECCCCe-------eEEEeccCCCcEEEEEEccCCC
Q 010754 422 AKIWNMKQDK-------YVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 422 i~iwd~~~~~-------~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
|..+++.... .+..+....+..-.+++..+|.
T Consensus 158 i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~ 196 (246)
T PF08450_consen 158 IWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGN 196 (246)
T ss_dssp EEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-
T ss_pred eEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCC
Confidence 9999885322 1222222223477889998887
No 318
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.41 E-value=6.1e-05 Score=76.29 Aligned_cols=201 Identities=11% Similarity=0.137 Sum_probs=129.0
Q ss_pred EEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCC-eEEEEECCCCCEEEEEECCC----
Q 010754 222 AWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKD-VTTLDWNGEGTLLATGSYDG---- 296 (502)
Q Consensus 222 ~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~l~~s~~g~~l~s~~~dg---- 296 (502)
+|++.+..++.|+.+|.|.+.+-.- + ....+..+... |+.+-...+..+|++.+.|+
T Consensus 30 c~~s~~~~vvigt~~G~V~~Ln~s~-~-----------------~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np 91 (933)
T KOG2114|consen 30 CCSSSTGSVVIGTADGRVVILNSSF-Q-----------------LIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNP 91 (933)
T ss_pred EEcCCCceEEEeeccccEEEecccc-e-----------------eeehheecchhhhhHhhcccCceEEEEEeecCCCCc
Confidence 5678888999999999988776321 0 00111122233 44443333446788877764
Q ss_pred -eEEEEECCC----c-e-EE---EecC-----ccCCeEEEEEecCCCEEEEEecCCeEEEEEc---C-CCceEEEEeecc
Q 010754 297 -QARIWSTNG----D-L-KC---TLSK-----HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDV---K-TEEWKQQFEFHS 357 (502)
Q Consensus 297 -~i~iwd~~~----~-~-~~---~~~~-----~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~---~-~~~~~~~~~~~~ 357 (502)
.++||+++. . . .. .... ...++.+++.+.+-+.+++|-.+|.|..+.- + .+....-.....
T Consensus 92 ~llkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~ 171 (933)
T KOG2114|consen 92 VLLKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGK 171 (933)
T ss_pred eEEEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCC
Confidence 589999652 1 1 11 1222 3567899999999899999999999999842 1 122122222346
Q ss_pred CCeEEEEecCCCE-EEEEeCCCeEEEEEcCCCcc-eEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEE
Q 010754 358 GPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRP-IKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD 435 (502)
Q Consensus 358 ~~v~~v~~~~~~~-~~~~~~d~~i~i~d~~~~~~-~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~ 435 (502)
.+|+.+.+..+.. .+...+-..|.+|.+....| ..++..|...++|..+++....++.|+.. .|.+|+....+.-..
T Consensus 172 ~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~~e-~l~fY~sd~~~~cfa 250 (933)
T KOG2114|consen 172 EPITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAGSE-FLYFYDSDGRGPCFA 250 (933)
T ss_pred CCceeeEEecCCceeEEEEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEecCc-eEEEEcCCCcceeee
Confidence 6899999955443 24444556788888874443 45578888899999999766645555544 599999876666566
Q ss_pred ec-cCCC
Q 010754 436 LR-EHSK 441 (502)
Q Consensus 436 ~~-~h~~ 441 (502)
+. +|..
T Consensus 251 f~~g~kk 257 (933)
T KOG2114|consen 251 FEVGEKK 257 (933)
T ss_pred ecCCCeE
Confidence 65 5554
No 319
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.37 E-value=3.3e-05 Score=71.45 Aligned_cols=78 Identities=15% Similarity=0.235 Sum_probs=63.5
Q ss_pred ccCCCCeEEEEECCCCC-EEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCC-CEEEEEecCCeEEEEEcCCCc
Q 010754 271 NEKSKDVTTLDWNGEGT-LLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEE 348 (502)
Q Consensus 271 ~~~~~~v~~l~~s~~g~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~s~~~d~~i~~wd~~~~~ 348 (502)
..+...|..++|+|..+ ++..++.+..|+|.|++...+........++++++|.-+. ++|++|...|.|.+||++..+
T Consensus 190 p~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~ 269 (463)
T KOG1645|consen 190 PGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAYNQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQPE 269 (463)
T ss_pred cccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheeccCCceeeeeccCCcceeEEeccCceEEEEEccCCC
Confidence 34567899999999877 7889999999999999876555433333899999998765 678899999999999998643
No 320
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=98.34 E-value=1.4e-05 Score=81.24 Aligned_cols=181 Identities=16% Similarity=0.200 Sum_probs=130.8
Q ss_pred CCCEEEEEECCCeEEEEECCCceEEEe-cCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEE
Q 010754 285 EGTLLATGSYDGQARIWSTNGDLKCTL-SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDV 363 (502)
Q Consensus 285 ~g~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v 363 (502)
++..++.|+....+..+|+++...... .-..+.|+-|+. +++++.+|...|+|.+-|.++.+.++++..|.+.+.++
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDf 223 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDF 223 (1118)
T ss_pred CCcceeecchhhheeeeecccceeeeeeeccCCceEEEEe--cCcEEEeecccceEEeecCCcCceeeeeeccccceeee
Confidence 345677788778888889876544333 333335666654 57899999999999999999999999999999999999
Q ss_pred EecCCCEEEEEe--------CCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEEC---CCC-
Q 010754 364 DWRNNVSFATSS--------TDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT-GSLLASCSDDVTAKIWNM---KQD- 430 (502)
Q Consensus 364 ~~~~~~~~~~~~--------~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~-g~~las~s~dg~i~iwd~---~~~- 430 (502)
+...+..+.+|- .|..|.|||++..+.+.-+.-+-++ .-+.|+|. ...++.+|..|...+-|. .+.
T Consensus 224 Dv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P-~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~ 302 (1118)
T KOG1275|consen 224 DVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGP-QFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPP 302 (1118)
T ss_pred eccCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCc-hhhhhcccccceEEEEecccceeeccccccCCCc
Confidence 977665444442 3566899999987765555444433 45778886 456888888999999883 322
Q ss_pred eeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 431 KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 431 ~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
--+..+......|.++.+|++|. .+..+-.++.+.+|-
T Consensus 303 ~~~~~v~p~~s~i~~fDiSsn~~-------alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 303 AGVKMVNPNGSGISAFDISSNGD-------ALAFGDHEGHVNLWA 340 (1118)
T ss_pred cceeEEccCCCcceeEEecCCCc-------eEEEecccCcEeeec
Confidence 11233334455699999999998 556666678888885
No 321
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=98.31 E-value=0.0003 Score=68.49 Aligned_cols=236 Identities=15% Similarity=0.174 Sum_probs=130.9
Q ss_pred ceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccC-CCCC--------------CCceeEEEee-----------ecCcc
Q 010754 217 EVCACAWSPAGSLLASGSGDSTARIWTIADGTSNG-GAQN--------------GPLNVLVLKH-----------VKGRT 270 (502)
Q Consensus 217 ~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~-~~~~--------------~~~~~~~~~~-----------~~~~~ 270 (502)
.|+.+.|.++..-|+.|...|.|.||.+...+... .... .+.....+.+ .....
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 48899999998889999999999999886553322 0000 0001111100 00111
Q ss_pred ccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCCceEEEe---cC------ccCCeEEEEEec-----CC---CEEEEE
Q 010754 271 NEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTL---SK------HKGPIFSLKWNK-----KG---DYLLTG 333 (502)
Q Consensus 271 ~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~---~~------~~~~v~~l~~~~-----~~---~~l~s~ 333 (502)
....+.|++++.| |=-++|.|..+|.+.|.|+++..+.-. .. ....|+++.|.- ++ -.+++|
T Consensus 83 ~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vG 161 (395)
T PF08596_consen 83 DAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVG 161 (395)
T ss_dssp ---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEE
T ss_pred eccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEE
Confidence 1236789999997 445999999999999999987644322 11 234678888862 22 478899
Q ss_pred ecCCeEEEEEcC--C-CceEEEE----eeccCCeEEEEec-C---------------------CCEEEEEeCCCeEEEEE
Q 010754 334 SCDKTAIVWDVK--T-EEWKQQF----EFHSGPTLDVDWR-N---------------------NVSFATSSTDNMIYVCK 384 (502)
Q Consensus 334 ~~d~~i~~wd~~--~-~~~~~~~----~~~~~~v~~v~~~-~---------------------~~~~~~~~~d~~i~i~d 384 (502)
...|.+.+|.+. . +.....+ ..+.+++..+..- . -..+++...+..++++.
T Consensus 162 Tn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~~ 241 (395)
T PF08596_consen 162 TNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVFK 241 (395)
T ss_dssp ETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE-
T ss_pred eCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEEe
Confidence 999999999874 1 2222222 1344555555431 1 12266667789999999
Q ss_pred cCCCcceEEEecCCCcEEEEEE-----cCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCC----CcEEEEEEccCCC
Q 010754 385 IGENRPIKTFAGHQGEVNCVKW-----DPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHS----KEIYTIRWSPTGS 453 (502)
Q Consensus 385 ~~~~~~~~~~~~h~~~i~~l~~-----sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~----~~i~~v~~sp~g~ 453 (502)
..+.+...+.....-....+.+ ...+..|++-..+|.|+++.+..-+.+..++... ..+....++++|.
T Consensus 242 ~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~ssis~~Gd 319 (395)
T PF08596_consen 242 PPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSSSSISRNGD 319 (395)
T ss_dssp TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---HHHHTT-EE-TTS-
T ss_pred CCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCccccccccccEECCCCC
Confidence 9888766555422222333444 2356778888999999999999988887776432 2344566777776
No 322
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=98.24 E-value=1.3e-05 Score=79.29 Aligned_cols=147 Identities=16% Similarity=0.257 Sum_probs=104.0
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE
Q 010754 214 HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 293 (502)
Q Consensus 214 H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~ 293 (502)
|...|.--++...+++++.|+.-|.+.+|+-..+..... ...+....+..+..+++..++|.|+
T Consensus 32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~----------------~~~~~~~~~~~~~vs~~e~lvAagt 95 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKL----------------KNEGATGITCVRSVSSVEYLVAAGT 95 (726)
T ss_pred CcceEEEEEeecCCceEEEecccceEEEEecCchhhhcc----------------cccCccceEEEEEecchhHhhhhhc
Confidence 334455556777899999999999999999777653211 1111234567778899999999999
Q ss_pred CCCeEEEEECCCc----eEEEe---cCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC----ceEEEEeeccCCeEE
Q 010754 294 YDGQARIWSTNGD----LKCTL---SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE----EWKQQFEFHSGPTLD 362 (502)
Q Consensus 294 ~dg~i~iwd~~~~----~~~~~---~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~----~~~~~~~~~~~~v~~ 362 (502)
..|.|.++-++.. ..... ..|+..|++++|++++..+++|...|+|.+-.+.+. ...+.+....+.|.-
T Consensus 96 ~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQ 175 (726)
T KOG3621|consen 96 ASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQ 175 (726)
T ss_pred CCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEE
Confidence 9999999976532 22211 236789999999999999999999999999888762 112333334567777
Q ss_pred EEecCCCEEEEEeC
Q 010754 363 VDWRNNVSFATSST 376 (502)
Q Consensus 363 v~~~~~~~~~~~~~ 376 (502)
+++.....+++...
T Consensus 176 lD~~q~~LLVStl~ 189 (726)
T KOG3621|consen 176 LDYLQSYLLVSTLT 189 (726)
T ss_pred eecccceehHhhhh
Confidence 88776666555443
No 323
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=98.22 E-value=0.0012 Score=65.12 Aligned_cols=172 Identities=15% Similarity=0.215 Sum_probs=95.8
Q ss_pred CCeEEEEECCCCCEEEEEECCCeEEEEECCCceEEEe-------cCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC
Q 010754 275 KDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTL-------SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE 347 (502)
Q Consensus 275 ~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~-------~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~ 347 (502)
+.+.++.|+.+. .|++-..||.+++||..|.....+ ......+....+..+|-.+++ .++.+.+..--..
T Consensus 81 ~~iv~~~wt~~e-~LvvV~~dG~v~vy~~~G~~~fsl~~~i~~~~v~e~~i~~~~~~~~GivvLt--~~~~~~~v~n~~~ 157 (410)
T PF04841_consen 81 GRIVGMGWTDDE-ELVVVQSDGTVRVYDLFGEFQFSLGEEIEEEKVLECRIFAIWFYKNGIVVLT--GNNRFYVVNNIDE 157 (410)
T ss_pred CCEEEEEECCCC-eEEEEEcCCEEEEEeCCCceeechhhhccccCcccccccccccCCCCEEEEC--CCCeEEEEeCccc
Confidence 579999998864 555667899999999877661111 111122333333345533333 3455554432221
Q ss_pred c-eEEEEeeccCCeEE----------EEec-CCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEE
Q 010754 348 E-WKQQFEFHSGPTLD----------VDWR-NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLAS 415 (502)
Q Consensus 348 ~-~~~~~~~~~~~v~~----------v~~~-~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las 415 (502)
. ..+.+......... ..+. .....+....++.+.+.+...... +. ..+++..|++||+|++||.
T Consensus 158 ~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~~---i~-~~~~i~~iavSpng~~iAl 233 (410)
T PF04841_consen 158 PVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFKQ---ID-SDGPIIKIAVSPNGKFIAL 233 (410)
T ss_pred cchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccccc---cc-CCCCeEEEEECCCCCEEEE
Confidence 1 11111100000000 1111 122233334444554333222111 11 2468999999999999999
Q ss_pred EeCCCcEEEEECCCCeeEEEeccC-CCcEEEEEEccCCC
Q 010754 416 CSDDVTAKIWNMKQDKYVHDLREH-SKEIYTIRWSPTGS 453 (502)
Q Consensus 416 ~s~dg~i~iwd~~~~~~~~~~~~h-~~~i~~v~~sp~g~ 453 (502)
-..+|.+.|.+..-.+.+..+... ......+.|.-+..
T Consensus 234 ~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~da 272 (410)
T PF04841_consen 234 FTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDA 272 (410)
T ss_pred EECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCc
Confidence 999999999987766776666633 45678999998876
No 324
>KOG1008 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=98.22 E-value=3.5e-07 Score=88.95 Aligned_cols=176 Identities=19% Similarity=0.294 Sum_probs=118.5
Q ss_pred CCeEEEEECCCC--CEEEEEECCCeEEEEECCCc---eEEEecCccCCeEEEEEecC-CCEEEEEe----cCCeEEEEEc
Q 010754 275 KDVTTLDWNGEG--TLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKK-GDYLLTGS----CDKTAIVWDV 344 (502)
Q Consensus 275 ~~v~~l~~s~~g--~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~v~~l~~~~~-~~~l~s~~----~d~~i~~wd~ 344 (502)
..+.|++++-+. .++++|..+|.|.+-..+.. ......++..+.++++|++- .+.|++|- .|..+.|||+
T Consensus 57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi 136 (783)
T KOG1008|consen 57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDI 136 (783)
T ss_pred CCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceec
Confidence 457788876543 58899999999999886532 24456778899999999984 45566552 2568999999
Q ss_pred CCC--ceEEE--Eee-ccCCeEEEEecCCCE-EEEEeCCCeEEEEEcCCCcc-eEEEecCCCcEEEEEEcC-CCCEEEEE
Q 010754 345 KTE--EWKQQ--FEF-HSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRP-IKTFAGHQGEVNCVKWDP-TGSLLASC 416 (502)
Q Consensus 345 ~~~--~~~~~--~~~-~~~~v~~v~~~~~~~-~~~~~~d~~i~i~d~~~~~~-~~~~~~h~~~i~~l~~sp-~g~~las~ 416 (502)
.++ .+... |.. .......++|..+.. +++|...+.+.++|++.... ...+ .+..+..+..+| .+.|+++-
T Consensus 137 ~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~sv--nTk~vqG~tVdp~~~nY~cs~ 214 (783)
T KOG1008|consen 137 NSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSV--NTKYVQGITVDPFSPNYFCSN 214 (783)
T ss_pred ccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhh--hhhhcccceecCCCCCceecc
Confidence 876 22222 222 334456888865554 56677777999999985422 2222 234566788888 78898877
Q ss_pred eCCCcEEEEE-CCCC-eeEEEeccCC----CcEEEEEEccCCC
Q 010754 417 SDDVTAKIWN-MKQD-KYVHDLREHS----KEIYTIRWSPTGS 453 (502)
Q Consensus 417 s~dg~i~iwd-~~~~-~~~~~~~~h~----~~i~~v~~sp~g~ 453 (502)
+ ||.|-+|| .++- +++..+.... ..+..++|+|...
T Consensus 215 ~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrt 256 (783)
T KOG1008|consen 215 S-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRT 256 (783)
T ss_pred c-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCc
Confidence 6 89999999 3332 2333333222 2389999999876
No 325
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.17 E-value=3.1e-05 Score=75.60 Aligned_cols=73 Identities=23% Similarity=0.425 Sum_probs=60.4
Q ss_pred cCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEE
Q 010754 213 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG 292 (502)
Q Consensus 213 ~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~ 292 (502)
.+.+.|.|++++|+...|+.|+.||+|.+||...+... .. ...-..+.++|+|+|.++++|
T Consensus 257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~------------~~-------ka~~~P~~iaWHp~gai~~V~ 317 (545)
T PF11768_consen 257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTL------------LA-------KAEFIPTLIAWHPDGAIFVVG 317 (545)
T ss_pred ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeee------------ee-------eecccceEEEEcCCCcEEEEE
Confidence 56788999999999999999999999999998765311 00 012247899999999999999
Q ss_pred ECCCeEEEEECC
Q 010754 293 SYDGQARIWSTN 304 (502)
Q Consensus 293 ~~dg~i~iwd~~ 304 (502)
+..|.+.+||+.
T Consensus 318 s~qGelQ~FD~A 329 (545)
T PF11768_consen 318 SEQGELQCFDMA 329 (545)
T ss_pred cCCceEEEEEee
Confidence 999999999964
No 326
>KOG1008 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=98.11 E-value=1.6e-06 Score=84.60 Aligned_cols=196 Identities=18% Similarity=0.290 Sum_probs=124.5
Q ss_pred CceEEEEEcCC--CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC-CCCEEEEE
Q 010754 216 SEVCACAWSPA--GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EGTLLATG 292 (502)
Q Consensus 216 ~~V~~~~~~p~--~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~-~g~~l~s~ 292 (502)
..+.|++++-+ ..+++.|..+|.|.+-.+....-. ......++....++++|++ |.+.||.|
T Consensus 57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdS---------------s~E~tp~~ar~Ct~lAwneLDtn~LAag 121 (783)
T KOG1008|consen 57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDS---------------SAEVTPGYARPCTSLAWNELDTNHLAAG 121 (783)
T ss_pred CCceeehhhcCCchhhhhhccccCceEEeecCCcccc---------------cceecccccccccccccccccHHHHHhh
Confidence 44678887764 358999999999999887654311 0112234456799999998 55677766
Q ss_pred E----CCCeEEEEECCCce-----EEEecC-ccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC-ceEEEEeeccCCeE
Q 010754 293 S----YDGQARIWSTNGDL-----KCTLSK-HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE-EWKQQFEFHSGPTL 361 (502)
Q Consensus 293 ~----~dg~i~iwd~~~~~-----~~~~~~-~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~v~ 361 (502)
- .|..+.|||+.... ...+.. ......+++|..+.+.+++|...+.+.++|++.. .....+. ...+.
T Consensus 122 ldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~svn--Tk~vq 199 (783)
T KOG1008|consen 122 LDKHRNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSVN--TKYVQ 199 (783)
T ss_pred hhhhcccCCccceecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhhh--hhhcc
Confidence 3 34689999976431 112222 3344568999988899999999999999999732 1122221 11233
Q ss_pred EEEecC-CCEEEEEeCCCeEEEEE-cCCC-cceEEEecCCC----cEEEEEEcCCC-CEEEEEeC-CCcEEEEECC
Q 010754 362 DVDWRN-NVSFATSSTDNMIYVCK-IGEN-RPIKTFAGHQG----EVNCVKWDPTG-SLLASCSD-DVTAKIWNMK 428 (502)
Q Consensus 362 ~v~~~~-~~~~~~~~~d~~i~i~d-~~~~-~~~~~~~~h~~----~i~~l~~sp~g-~~las~s~-dg~i~iwd~~ 428 (502)
.+...| ..-.++...||.|-+|| .++- .++..+..... .+..++|+|.. .++++++. .++|+.+|+.
T Consensus 200 G~tVdp~~~nY~cs~~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~ 275 (783)
T KOG1008|consen 200 GITVDPFSPNYFCSNSDGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC 275 (783)
T ss_pred cceecCCCCCceeccccCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence 333333 22345556699999999 4432 33333332222 38899999963 35566665 4789999974
No 327
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=98.08 E-value=0.00041 Score=68.48 Aligned_cols=144 Identities=18% Similarity=0.198 Sum_probs=85.8
Q ss_pred ccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEE
Q 010754 314 HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKT 393 (502)
Q Consensus 314 ~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~ 393 (502)
.......+.++|+|+++++ +.||...++.....+... .+......|.+.+.|++-...+.|.++.--+....+.
T Consensus 31 ~~~~p~~ls~npngr~v~V-~g~geY~iyt~~~~r~k~-----~G~g~~~vw~~~n~yAv~~~~~~I~I~kn~~~~~~k~ 104 (443)
T PF04053_consen 31 CEIYPQSLSHNPNGRFVLV-CGDGEYEIYTALAWRNKA-----FGSGLSFVWSSRNRYAVLESSSTIKIYKNFKNEVVKS 104 (443)
T ss_dssp -SS--SEEEE-TTSSEEEE-EETTEEEEEETTTTEEEE-----EEE-SEEEE-TSSEEEEE-TTS-EEEEETTEE-TT--
T ss_pred CCcCCeeEEECCCCCEEEE-EcCCEEEEEEccCCcccc-----cCceeEEEEecCccEEEEECCCeEEEEEcCccccceE
Confidence 3445788999999999888 568888888754443322 2344578898899999999899999975444444444
Q ss_pred EecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEE
Q 010754 394 FAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLY 473 (502)
Q Consensus 394 ~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~i 473 (502)
+... ..+..|-. |.+|+..+.+ .|.+||+.+++.++++... +|..|.|+++|. .+.+. ++..+.+
T Consensus 105 i~~~-~~~~~If~---G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~-------~val~-t~~~i~i 169 (443)
T PF04053_consen 105 IKLP-FSVEKIFG---GNLLGVKSSD-FICFYDWETGKLIRRIDVS--AVKYVIWSDDGE-------LVALV-TKDSIYI 169 (443)
T ss_dssp ---S-S-EEEEE----SSSEEEEETT-EEEEE-TTT--EEEEESS---E-EEEEE-TTSS-------EEEEE--S-SEEE
T ss_pred EcCC-cccceEEc---CcEEEEECCC-CEEEEEhhHcceeeEEecC--CCcEEEEECCCC-------EEEEE-eCCeEEE
Confidence 4422 23444432 8888777765 7999999999999999743 489999999998 44444 4556666
Q ss_pred EEeee
Q 010754 474 WICSI 478 (502)
Q Consensus 474 w~~~~ 478 (502)
+..+.
T Consensus 170 l~~~~ 174 (443)
T PF04053_consen 170 LKYNL 174 (443)
T ss_dssp EEE-H
T ss_pred EEecc
Confidence 65433
No 328
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=98.07 E-value=0.00048 Score=67.78 Aligned_cols=222 Identities=18% Similarity=0.238 Sum_probs=127.5
Q ss_pred EEeccCCCceEEEEEcCCCCeEEEEe---CC-CcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC
Q 010754 209 TILEGHTSEVCACAWSPAGSLLASGS---GD-STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 284 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~~~~l~sgs---~d-g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~ 284 (502)
+.+..-...+..-+|+|++..++..+ .. ..+.++++.++....... ....-..-+|+|
T Consensus 186 ~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~------------------~~g~~~~P~fsp 247 (425)
T COG0823 186 QKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN------------------FNGNNGAPAFSP 247 (425)
T ss_pred eEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec------------------cCCccCCccCCC
Confidence 34444456677789999987655442 22 458889988875321100 123345667999
Q ss_pred CCCEEEEEE-CCCe--EEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEec-CC--eEEEEEcCCCceEEEEeeccC
Q 010754 285 EGTLLATGS-YDGQ--ARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSC-DK--TAIVWDVKTEEWKQQFEFHSG 358 (502)
Q Consensus 285 ~g~~l~s~~-~dg~--i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~-d~--~i~~wd~~~~~~~~~~~~~~~ 358 (502)
||+.|+.+. .||. |.++|+.++....+....+.-..=.|+|+|++++-.+. .| .|.++|...+.. ..+....+
T Consensus 248 DG~~l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~riT~~~~ 326 (425)
T COG0823 248 DGSKLAFSSSRDGSPDIYLMDLDGKNLPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-TRLTFSGG 326 (425)
T ss_pred CCCEEEEEECCCCCccEEEEcCCCCcceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce-eEeeccCC
Confidence 999777654 5564 55667776665555544444456789999998886544 44 466667665554 44444444
Q ss_pred CeEEEEecCCCEEE-EEe-CCCe--EEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCC-cEEEEEC-CCCee
Q 010754 359 PTLDVDWRNNVSFA-TSS-TDNM--IYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDV-TAKIWNM-KQDKY 432 (502)
Q Consensus 359 ~v~~v~~~~~~~~~-~~~-~d~~--i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg-~i~iwd~-~~~~~ 432 (502)
.-..-.|++++..+ ..+ .+|. |.+.|+.++..+..+. +......-.|.|+|+.+...+..+ .=.++.+ .+++.
T Consensus 327 ~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt-~~~~~e~ps~~~ng~~i~~~s~~~~~~~l~~~s~~g~~ 405 (425)
T COG0823 327 GNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILT-STYLNESPSWAPNGRMIMFSSGQGGGSVLSLVSLDGRV 405 (425)
T ss_pred CCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEcc-ccccCCCCCcCCCCceEEEeccCCCCceEEEeecccee
Confidence 44466777776533 333 2444 6666666655444443 334445667888888877655533 2222222 23333
Q ss_pred EEEeccCCCcEEEEEEcc
Q 010754 433 VHDLREHSKEIYTIRWSP 450 (502)
Q Consensus 433 ~~~~~~h~~~i~~v~~sp 450 (502)
...+..-.+.+..-+|+|
T Consensus 406 ~~~~~~~~~~~~~p~w~~ 423 (425)
T COG0823 406 SRPLPLADGDVRVPAWSP 423 (425)
T ss_pred EEEEeccCcceecccccC
Confidence 333333334555555654
No 329
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.06 E-value=0.0021 Score=63.62 Aligned_cols=221 Identities=9% Similarity=0.049 Sum_probs=125.4
Q ss_pred CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCC-
Q 010754 227 GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG- 305 (502)
Q Consensus 227 ~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~- 305 (502)
+..++.+..++.+..+|..+++..-....... .........++. .+..++.++.+|.+..+|...
T Consensus 160 ~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~--------~~~~~~~~sP~v------~~~~v~~~~~~g~v~a~d~~~G 225 (394)
T PRK11138 160 DGLVLVHTSNGMLQALNESDGAVKWTVNLDVP--------SLTLRGESAPAT------AFGGAIVGGDNGRVSAVLMEQG 225 (394)
T ss_pred CCEEEEECCCCEEEEEEccCCCEeeeecCCCC--------cccccCCCCCEE------ECCEEEEEcCCCEEEEEEccCC
Confidence 34566677788888888888775432211100 000000011111 123566677788888887653
Q ss_pred ceEEEecCcc----C---CeEEEEEec--CCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEEEEeC
Q 010754 306 DLKCTLSKHK----G---PIFSLKWNK--KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSST 376 (502)
Q Consensus 306 ~~~~~~~~~~----~---~v~~l~~~~--~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~ 376 (502)
.......... . ....+.-+| .+..+++++.+|.+..+|..+|+.+....... ...+. ..++.+++++.
T Consensus 226 ~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~--~~~~~-~~~~~vy~~~~ 302 (394)
T PRK11138 226 QLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREYGS--VNDFA-VDGGRIYLVDQ 302 (394)
T ss_pred hhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecCCC--ccCcE-EECCEEEEEcC
Confidence 3332221100 0 001111122 24577778889999999999998766543221 11122 23566777889
Q ss_pred CCeEEEEEcCCCcceEEEecCC-CcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCC
Q 010754 377 DNMIYVCKIGENRPIKTFAGHQ-GEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGT 455 (502)
Q Consensus 377 d~~i~i~d~~~~~~~~~~~~h~-~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~ 455 (502)
++.++.+|..+++.+.....-. ....+... .+.+|+.++.||.|++.|..+|+.+...+.....+.+ +|-
T Consensus 303 ~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v--~~g~l~v~~~~G~l~~ld~~tG~~~~~~~~~~~~~~s---~P~---- 373 (394)
T PRK11138 303 NDRVYALDTRGGVELWSQSDLLHRLLTAPVL--YNGYLVVGDSEGYLHWINREDGRFVAQQKVDSSGFLS---EPV---- 373 (394)
T ss_pred CCeEEEEECCCCcEEEcccccCCCcccCCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCccee---CCE----
Confidence 9999999999987765443211 11222222 2557788999999999999999988777643333322 111
Q ss_pred CCCCccEEEEeecCceEEE
Q 010754 456 NNPNQQLILARLIPYFLYW 474 (502)
Q Consensus 456 ~~~~~~l~las~~~~~~iw 474 (502)
..+..+++++.++.+..+
T Consensus 374 -~~~~~l~v~t~~G~l~~~ 391 (394)
T PRK11138 374 -VADDKLLIQARDGTVYAI 391 (394)
T ss_pred -EECCEEEEEeCCceEEEE
Confidence 012367888888876553
No 330
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.05 E-value=4.4e-05 Score=74.62 Aligned_cols=76 Identities=16% Similarity=0.191 Sum_probs=63.9
Q ss_pred cCCCCeEEEEECCCCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCc
Q 010754 272 EKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE 348 (502)
Q Consensus 272 ~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~ 348 (502)
+....|.+++++|+...++.|+.||.|.+||......... ...-..+.++|+|+|..+++|+..|.+.+||+.-..
T Consensus 257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~-ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALsp 332 (545)
T PF11768_consen 257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA-KAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALSP 332 (545)
T ss_pred ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeee-eecccceEEEEcCCCcEEEEEcCCceEEEEEeecCc
Confidence 3456799999999999999999999999999776544333 445667899999999999999999999999986543
No 331
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=97.98 E-value=0.00095 Score=65.93 Aligned_cols=220 Identities=13% Similarity=0.166 Sum_probs=114.4
Q ss_pred eccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEE
Q 010754 211 LEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA 290 (502)
Q Consensus 211 l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~ 290 (502)
+....-....+.++|+|++++.+ .||.-.|+....... + ..+.....+|.+.+ .+|
T Consensus 28 lg~~~~~p~~ls~npngr~v~V~-g~geY~iyt~~~~r~--------------k--------~~G~g~~~vw~~~n-~yA 83 (443)
T PF04053_consen 28 LGSCEIYPQSLSHNPNGRFVLVC-GDGEYEIYTALAWRN--------------K--------AFGSGLSFVWSSRN-RYA 83 (443)
T ss_dssp EEE-SS--SEEEE-TTSSEEEEE-ETTEEEEEETTTTEE--------------E--------EEEE-SEEEE-TSS-EEE
T ss_pred CCCCCcCCeeEEECCCCCEEEEE-cCCEEEEEEccCCcc--------------c--------ccCceeEEEEecCc-cEE
Confidence 33344456789999999988885 568888887332210 0 01235678899855 466
Q ss_pred EEECCCeEEEEE-CCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCC
Q 010754 291 TGSYDGQARIWS-TNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV 369 (502)
Q Consensus 291 s~~~dg~i~iwd-~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~ 369 (502)
+-..++.|.|+. .+......+.. ...+..|-. |..|...+. +.|.+||+.+++.++.+... +|..+.|++++
T Consensus 84 v~~~~~~I~I~kn~~~~~~k~i~~-~~~~~~If~---G~LL~~~~~-~~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g 156 (443)
T PF04053_consen 84 VLESSSTIKIYKNFKNEVVKSIKL-PFSVEKIFG---GNLLGVKSS-DFICFYDWETGKLIRRIDVS--AVKYVIWSDDG 156 (443)
T ss_dssp EE-TTS-EEEEETTEE-TT------SS-EEEEE----SSSEEEEET-TEEEEE-TTT--EEEEESS---E-EEEEE-TTS
T ss_pred EEECCCeEEEEEcCccccceEEcC-CcccceEEc---CcEEEEECC-CCEEEEEhhHcceeeEEecC--CCcEEEEECCC
Confidence 677688999974 43322112211 122343332 776666654 48999999999999988744 38999999987
Q ss_pred EEEEEeCCCeEEEEEcCCC-----------cceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEecc
Q 010754 370 SFATSSTDNMIYVCKIGEN-----------RPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE 438 (502)
Q Consensus 370 ~~~~~~~d~~i~i~d~~~~-----------~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~ 438 (502)
.+++-..+..+++++.... ..+..+..-...|.+.+|..+ .++-.+.. .|+.+ ..|.. ..+..
T Consensus 157 ~~val~t~~~i~il~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d--~fiYtT~~-~lkYl--~~Ge~-~~i~~ 230 (443)
T PF04053_consen 157 ELVALVTKDSIYILKYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVED--CFIYTTSN-HLKYL--VNGET-GIIAH 230 (443)
T ss_dssp SEEEEE-S-SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT--EEEEE-TT-EEEEE--ETTEE-EEEEE
T ss_pred CEEEEEeCCeEEEEEecchhcccccccCchhceEEEEEecceeEEEEEEcC--EEEEEcCC-eEEEE--EcCCc-ceEEE
Confidence 7666666778888775543 133444333567888999866 44333333 67663 33332 22222
Q ss_pred CCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEE
Q 010754 439 HSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYW 474 (502)
Q Consensus 439 h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw 474 (502)
-..+++=+...|... .+++.-.++.+..+
T Consensus 231 ld~~~yllgy~~~~~-------~ly~~Dr~~~v~~~ 259 (443)
T PF04053_consen 231 LDKPLYLLGYLPKEN-------RLYLIDRDGNVISY 259 (443)
T ss_dssp -SS--EEEEEETTTT-------EEEEE-TT--EEEE
T ss_pred cCCceEEEEEEccCC-------EEEEEECCCCEEEE
Confidence 345677777777544 45555555555444
No 332
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.94 E-value=0.00045 Score=64.23 Aligned_cols=79 Identities=18% Similarity=0.250 Sum_probs=62.5
Q ss_pred eEEeccCCCceEEEEEcCCCC-eEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 208 VTILEGHTSEVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~-~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
...+.+|...|..++|+|..+ ++..++.+.+|+|.|+++...... ... ...+++++|.-+.
T Consensus 186 sq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vss-----------------y~a-~~~~wSC~wDlde 247 (463)
T KOG1645|consen 186 SQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSS-----------------YIA-YNQIWSCCWDLDE 247 (463)
T ss_pred hhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeh-----------------eec-cCCceeeeeccCC
Confidence 446778889999999999765 889999999999999998653221 111 2569999998765
Q ss_pred -CEEEEEECCCeEEEEECC
Q 010754 287 -TLLATGSYDGQARIWSTN 304 (502)
Q Consensus 287 -~~l~s~~~dg~i~iwd~~ 304 (502)
.+|+.|..+|.|.|||++
T Consensus 248 ~h~IYaGl~nG~VlvyD~R 266 (463)
T KOG1645|consen 248 RHVIYAGLQNGMVLVYDMR 266 (463)
T ss_pred cceeEEeccCceEEEEEcc
Confidence 578888889999999975
No 333
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=97.94 E-value=0.0031 Score=61.26 Aligned_cols=248 Identities=17% Similarity=0.248 Sum_probs=127.0
Q ss_pred eeCCCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecC-ccc-cCCCCeEE
Q 010754 202 EIPNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKG-RTN-EKSKDVTT 279 (502)
Q Consensus 202 ~~~~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~v~~ 279 (502)
++....+..+......+....|+|+|+.+|.... +.|.++++.++....-...+...+. ..... ... .--..-.+
T Consensus 29 d~~~~~~~~l~~~~~~~~~~~~sP~g~~~~~v~~-~nly~~~~~~~~~~~lT~dg~~~i~--nG~~dwvyeEEv~~~~~~ 105 (353)
T PF00930_consen 29 DIETGEITPLTPPPPKLQDAKWSPDGKYIAFVRD-NNLYLRDLATGQETQLTTDGEPGIY--NGVPDWVYEEEVFDRRSA 105 (353)
T ss_dssp ETTTTEEEESS-EETTBSEEEE-SSSTEEEEEET-TEEEEESSTTSEEEESES--TTTEE--ESB--HHHHHHTSSSSBS
T ss_pred ecCCCceEECcCCccccccceeecCCCeeEEEec-CceEEEECCCCCeEEeccccceeEE--cCccceeccccccccccc
Confidence 3444444555444677889999999999998864 7899999877643221111111100 00000 000 00122467
Q ss_pred EEECCCCCEEEEEECC-CeEEEE-----------------------------------ECCCceEEEe------cCccCC
Q 010754 280 LDWNGEGTLLATGSYD-GQARIW-----------------------------------STNGDLKCTL------SKHKGP 317 (502)
Q Consensus 280 l~~s~~g~~l~s~~~d-g~i~iw-----------------------------------d~~~~~~~~~------~~~~~~ 317 (502)
+-|||||++||....| ..|..+ ++.+.....+ .....-
T Consensus 106 ~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~y 185 (353)
T PF00930_consen 106 VWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYY 185 (353)
T ss_dssp EEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHHHTSSEE
T ss_pred eEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccccCCCccC
Confidence 8899999998887654 223222 2211111000 012234
Q ss_pred eEEEEEecCCCEEEEEec--CC---eEEEEEcCCCceEEEEeecc-CC---eEEEEec--CCCE-EEEEeCCCe--EEEE
Q 010754 318 IFSLKWNKKGDYLLTGSC--DK---TAIVWDVKTEEWKQQFEFHS-GP---TLDVDWR--NNVS-FATSSTDNM--IYVC 383 (502)
Q Consensus 318 v~~l~~~~~~~~l~s~~~--d~---~i~~wd~~~~~~~~~~~~~~-~~---v~~v~~~--~~~~-~~~~~~d~~--i~i~ 383 (502)
+..+.|.+++..|+..-. +. .+.++|..++.....+.... +. .....+. ++.. +.....+|. |+++
T Consensus 186 l~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~ 265 (353)
T PF00930_consen 186 LTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLY 265 (353)
T ss_dssp EEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEE
T ss_pred cccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEE
Confidence 678889888884444332 22 46777887776544443322 11 1233332 3333 444446665 4555
Q ss_pred EcCCCcceEEEecCCCcEEE-EEEcCCCCEEE-EEeCCC----cEEEEECCCCeeEEEeccCCCcEEEEEEccCCC
Q 010754 384 KIGENRPIKTFAGHQGEVNC-VKWDPTGSLLA-SCSDDV----TAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 384 d~~~~~~~~~~~~h~~~i~~-l~~sp~g~~la-s~s~dg----~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
+...+. ...+....-.|+. +.|+++++.|. ++..++ .|+.-++..+..+..+....+.-..+.|||+|+
T Consensus 266 ~~~~~~-~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~~~~~~Spdg~ 340 (353)
T PF00930_consen 266 DLDGGK-PRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGDHYSASFSPDGK 340 (353)
T ss_dssp ETTSSE-EEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSSTTEEEEE-TTSS
T ss_pred cccccc-eeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCCceEEEECCCCC
Confidence 555554 3344444556755 67888877554 555432 455556662334455553333337999999998
No 334
>smart00667 LisH Lissencephaly type-1-like homology motif. Alpha-helical motif present in Lis1, treacle, Nopp140, some katanin p60 subunits, muskelin, tonneau, LEUNIG and numerous WD40 repeat-containing proteins. It is suggested that LisH motifs contribute to the regulation of microtubule dynamics, either by mediating dimerisation, or else by binding cytoplasmic dynein heavy chain or microtubules directly.
Probab=97.93 E-value=3.6e-06 Score=50.49 Aligned_cols=31 Identities=35% Similarity=0.546 Sum_probs=28.6
Q ss_pred cchhhHHHHHHHHhcCCcchhhcccccccCc
Q 010754 6 SEELNYLVFRYLQESGLLHSAFVLGYEAGIN 36 (502)
Q Consensus 6 s~evn~li~rYlqE~g~~~sA~~~~~e~~~~ 36 (502)
-.++|.||+.||++.||..||.+|.+|+.+.
T Consensus 3 ~~~l~~lI~~yL~~~g~~~ta~~l~~e~~~~ 33 (34)
T smart00667 3 RSELNRLILEYLLRNGYEETAETLQKESGLS 33 (34)
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHHHHHhCCC
Confidence 3679999999999999999999999999875
No 335
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=97.89 E-value=0.0091 Score=54.07 Aligned_cols=179 Identities=13% Similarity=0.198 Sum_probs=104.8
Q ss_pred CCCeEEEEECCCCC-EEEEEECCCeEEEEECCCceEEEecCc-cCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCc---
Q 010754 274 SKDVTTLDWNGEGT-LLATGSYDGQARIWSTNGDLKCTLSKH-KGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE--- 348 (502)
Q Consensus 274 ~~~v~~l~~s~~g~-~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~--- 348 (502)
...+..++|+|+.+ ++++....+.|..++.+++.+....-. .+..-.|++..++.++++.-.++.+.++++....
T Consensus 21 ~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~~~~ 100 (248)
T PF06977_consen 21 LDELSGLTYNPDTGTLFAVQDEPGEIYELSLDGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTIDDDTTSL 100 (248)
T ss_dssp -S-EEEEEEETTTTEEEEEETTTTEEEEEETT--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE----TT-
T ss_pred cCCccccEEcCCCCeEEEEECCCCEEEEEcCCCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEecccccc
Confidence 34599999999755 666667778999999988877665433 3567889998888777776678999999883321
Q ss_pred -e--EEEEe-----eccCCeEEEEecC-CCEEEEEeCCCeEEEEEcCC---CcceEEE--------ecCCCcEEEEEEcC
Q 010754 349 -W--KQQFE-----FHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGE---NRPIKTF--------AGHQGEVNCVKWDP 408 (502)
Q Consensus 349 -~--~~~~~-----~~~~~v~~v~~~~-~~~~~~~~~d~~i~i~d~~~---~~~~~~~--------~~h~~~i~~l~~sp 408 (502)
. ...+. .+...+-.++|.+ .+.|+++....-..+|.+.. ...+... ......+.++.++|
T Consensus 101 ~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p 180 (248)
T PF06977_consen 101 DRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDP 180 (248)
T ss_dssp -EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEEEET
T ss_pred chhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccccceEEcC
Confidence 1 12222 1233578899966 46676666665566666653 2111111 11234688999999
Q ss_pred C-CCEEEEEeCCCcEEEEECCCCeeEEEeccCC---------CcEEEEEEccCCC
Q 010754 409 T-GSLLASCSDDVTAKIWNMKQDKYVHDLREHS---------KEIYTIRWSPTGS 453 (502)
Q Consensus 409 ~-g~~las~s~dg~i~iwd~~~~~~~~~~~~h~---------~~i~~v~~sp~g~ 453 (502)
. |.+++.+.....|.++| .+|+.+..+.-.. ...-.|+|.++|.
T Consensus 181 ~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~ 234 (248)
T PF06977_consen 181 RTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGN 234 (248)
T ss_dssp TTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--
T ss_pred CCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCC
Confidence 6 45667777788899999 7777766554222 2578999999997
No 336
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=97.87 E-value=0.002 Score=63.62 Aligned_cols=148 Identities=20% Similarity=0.278 Sum_probs=80.3
Q ss_pred eEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEee----ccCCeEE-----EEecC
Q 010754 297 QARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF----HSGPTLD-----VDWRN 367 (502)
Q Consensus 297 ~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~----~~~~v~~-----v~~~~ 367 (502)
.|+||+..|..+....-..+.|.++.|+.+ ..|++...||.+++||+. |.. .+.. ....|.. ..+..
T Consensus 62 ~I~iys~sG~ll~~i~w~~~~iv~~~wt~~-e~LvvV~~dG~v~vy~~~-G~~--~fsl~~~i~~~~v~e~~i~~~~~~~ 137 (410)
T PF04841_consen 62 SIQIYSSSGKLLSSIPWDSGRIVGMGWTDD-EELVVVQSDGTVRVYDLF-GEF--QFSLGEEIEEEKVLECRIFAIWFYK 137 (410)
T ss_pred EEEEECCCCCEeEEEEECCCCEEEEEECCC-CeEEEEEcCCEEEEEeCC-Cce--eechhhhccccCcccccccccccCC
Confidence 599999999888776555589999999885 556677899999999986 333 2221 1112222 23333
Q ss_pred CCEEEEEeCCCeEEEEEcCCCc-ceEEE---ecCCC------cEEE-EEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q 010754 368 NVSFATSSTDNMIYVCKIGENR-PIKTF---AGHQG------EVNC-VKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDL 436 (502)
Q Consensus 368 ~~~~~~~~~d~~i~i~d~~~~~-~~~~~---~~h~~------~i~~-l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~ 436 (502)
.+.++ -..++.+++..-.... ..+.+ .+... .... ..++.+....+....++.+.+-+-...+. +
T Consensus 138 ~Givv-Lt~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~~---i 213 (410)
T PF04841_consen 138 NGIVV-LTGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFKQ---I 213 (410)
T ss_pred CCEEE-ECCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccccc---c
Confidence 44333 3445555444322211 11111 11000 0111 23444445555555555555333222111 2
Q ss_pred ccCCCcEEEEEEccCCC
Q 010754 437 REHSKEIYTIRWSPTGS 453 (502)
Q Consensus 437 ~~h~~~i~~v~~sp~g~ 453 (502)
. ..+++..|+.||+|+
T Consensus 214 ~-~~~~i~~iavSpng~ 229 (410)
T PF04841_consen 214 D-SDGPIIKIAVSPNGK 229 (410)
T ss_pred c-CCCCeEEEEECCCCC
Confidence 2 346899999999998
No 337
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=97.87 E-value=0.0087 Score=54.20 Aligned_cols=198 Identities=13% Similarity=0.169 Sum_probs=110.0
Q ss_pred EEeccCCCceEEEEEcCCCC-eEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC
Q 010754 209 TILEGHTSEVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~~~-~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~ 287 (502)
+.+.+-...+..++|+|+.. ++++....+.|...+.. ++.+ +.... ......-.|++..++.
T Consensus 15 ~~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vl-------------r~i~l---~g~~D~EgI~y~g~~~ 77 (248)
T PF06977_consen 15 KPLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVL-------------RRIPL---DGFGDYEGITYLGNGR 77 (248)
T ss_dssp EE-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EE-------------EEEE----SS-SSEEEEEE-STTE
T ss_pred eECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEE-------------EEEeC---CCCCCceeEEEECCCE
Confidence 34556667799999999755 66666667777766653 3321 11111 1135688899988887
Q ss_pred EEEEEECCCeEEEEECCC--c-----eEEEe----c-CccCCeEEEEEecCCCEEEEEecCCeEEEEEcCC---CceEEE
Q 010754 288 LLATGSYDGQARIWSTNG--D-----LKCTL----S-KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT---EEWKQQ 352 (502)
Q Consensus 288 ~l~s~~~dg~i~iwd~~~--~-----~~~~~----~-~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~---~~~~~~ 352 (502)
++++--.++.+.++++.. . ....+ . .++..+-.++|+|.++.|+++-...-..+|.+.. ...+..
T Consensus 78 ~vl~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~ 157 (248)
T PF06977_consen 78 YVLSEERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFV 157 (248)
T ss_dssp EEEEETTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EE
T ss_pred EEEEEcCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceee
Confidence 777665689999888631 1 11111 1 2456689999999988888887776666776653 222211
Q ss_pred Ee--------eccCCeEEEEecCC--CEEEEEeCCCeEEEEEcCCCcceEEEecCC---------CcEEEEEEcCCCCEE
Q 010754 353 FE--------FHSGPTLDVDWRNN--VSFATSSTDNMIYVCKIGENRPIKTFAGHQ---------GEVNCVKWDPTGSLL 413 (502)
Q Consensus 353 ~~--------~~~~~v~~v~~~~~--~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~---------~~i~~l~~sp~g~~l 413 (502)
.. .....+.++.+.+. ..++.+..+..|..+| .+++++..+.-.. ...-.|+|+++|++.
T Consensus 158 ~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LY 236 (248)
T PF06977_consen 158 SDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLY 236 (248)
T ss_dssp EE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EE
T ss_pred ccccccccccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEE
Confidence 11 12234677777653 5678888888999999 6777766554222 246789999999765
Q ss_pred EEEeCCCcEEEE
Q 010754 414 ASCSDDVTAKIW 425 (502)
Q Consensus 414 as~s~dg~i~iw 425 (502)
++ |+-+..+++
T Consensus 237 Iv-sEpNlfy~f 247 (248)
T PF06977_consen 237 IV-SEPNLFYRF 247 (248)
T ss_dssp EE-ETTTEEEEE
T ss_pred EE-cCCceEEEe
Confidence 55 455555444
No 338
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.82 E-value=0.011 Score=56.56 Aligned_cols=184 Identities=10% Similarity=0.106 Sum_probs=109.6
Q ss_pred CCEEEEEEC---------C-CeEEEEECCCc-----eEE--EecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCc
Q 010754 286 GTLLATGSY---------D-GQARIWSTNGD-----LKC--TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE 348 (502)
Q Consensus 286 g~~l~s~~~---------d-g~i~iwd~~~~-----~~~--~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~ 348 (502)
..+|++|+. . |.|.++++... ... ......++|++++-. + .+|+++ .++.|.+|++...+
T Consensus 42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~-~-~~lv~~-~g~~l~v~~l~~~~ 118 (321)
T PF03178_consen 42 KEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTEVKGPVTAICSF-N-GRLVVA-VGNKLYVYDLDNSK 118 (321)
T ss_dssp SEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEE-T-TEEEEE-ETTEEEEEEEETTS
T ss_pred cCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEeecCcceEhhhh-C-CEEEEe-ecCEEEEEEccCcc
Confidence 467887763 2 88999997762 222 223457899999876 3 344443 46899999998887
Q ss_pred -eEEEEee-ccCCeEEEEecCCCEEEEEeCCCeEEEEEcCC-CcceEEEec--CCCcEEEEEEcCCCCEEEEEeCCCcEE
Q 010754 349 -WKQQFEF-HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGE-NRPIKTFAG--HQGEVNCVKWDPTGSLLASCSDDVTAK 423 (502)
Q Consensus 349 -~~~~~~~-~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~-~~~~~~~~~--h~~~i~~l~~sp~g~~las~s~dg~i~ 423 (502)
....-.. ....+.++....+ .+++|..-..+.++.... ...+..+.. ....++++.|-++++.++.+..+|.|.
T Consensus 119 ~l~~~~~~~~~~~i~sl~~~~~-~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~ 197 (321)
T PF03178_consen 119 TLLKKAFYDSPFYITSLSVFKN-YILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLF 197 (321)
T ss_dssp SEEEEEEE-BSSSEEEEEEETT-EEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEE
T ss_pred cchhhheecceEEEEEEecccc-EEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEE
Confidence 4443333 3335666666544 788888888887775543 222333322 345688888886777999999999999
Q ss_pred EEECCC-------C--eeE--EEeccCCCcEEEE---EEccC-CCCCCCCCccEEEEeecCceEEE
Q 010754 424 IWNMKQ-------D--KYV--HDLREHSKEIYTI---RWSPT-GSGTNNPNQQLILARLIPYFLYW 474 (502)
Q Consensus 424 iwd~~~-------~--~~~--~~~~~h~~~i~~v---~~sp~-g~~~~~~~~~l~las~~~~~~iw 474 (502)
++.... + ++. ..+. ....|+++ ++.|. +.........++.++.+|.+-+-
T Consensus 198 ~l~~~~~~~~~~~~~~~L~~~~~f~-lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l 262 (321)
T PF03178_consen 198 VLRYNPEIPNSRDGDPKLERISSFH-LGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVL 262 (321)
T ss_dssp EEEE-SS-SSTTTTTTBEEEEEEEE--SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred EEEECCCCcccccccccceeEEEEE-CCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence 998752 1 222 2332 33457777 55563 11001113458889999887744
No 339
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=97.82 E-value=0.00038 Score=69.31 Aligned_cols=198 Identities=11% Similarity=0.129 Sum_probs=124.1
Q ss_pred CeEEEEECCCCCEEEEEECCCeEEEEECCCceEEEecC--ccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEE-
Q 010754 276 DVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSK--HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQ- 352 (502)
Q Consensus 276 ~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~- 352 (502)
.|.--+++..+++++.|+.-|.+++|+..++....+.. ..+.+..+..+++..++++|+..|.|.++-+..+.....
T Consensus 35 ~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~ 114 (726)
T KOG3621|consen 35 RVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLD 114 (726)
T ss_pred eEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcce
Confidence 45555566788999999999999999988766655543 556677778888888888999999999998765432111
Q ss_pred ----E-eeccCCeEEEEecCCC-EEEEEeCCCeEEEEEcCCC----cceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcE
Q 010754 353 ----F-EFHSGPTLDVDWRNNV-SFATSSTDNMIYVCKIGEN----RPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTA 422 (502)
Q Consensus 353 ----~-~~~~~~v~~v~~~~~~-~~~~~~~d~~i~i~d~~~~----~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i 422 (502)
+ ..|...|++++|+++. .+.+|...|+|..-.+... ...+.+-.-.+.|..+.+. ++.+|++...- -
T Consensus 115 ~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~-q~~LLVStl~r--~ 191 (726)
T KOG3621|consen 115 YVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYL-QSYLLVSTLTR--C 191 (726)
T ss_pred eeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecc-cceehHhhhhh--h
Confidence 1 1267789999998765 4899999999988888772 1223333345678777765 34444444332 2
Q ss_pred EEEECCCCeeEEEec-cCCCc-EEEEEEccCCCCCCCCCccEEEEeecCceEEEEeeeEE
Q 010754 423 KIWNMKQDKYVHDLR-EHSKE-IYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICSIYF 480 (502)
Q Consensus 423 ~iwd~~~~~~~~~~~-~h~~~-i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~~~ 480 (502)
.++++..++.-+.=+ .-.+. -...+|-|--. .. ....+-.+-...++|-.++..
T Consensus 192 ~Lc~tE~eti~QIG~k~R~~~~~~GACF~~g~~---~~-q~~~IycaRPG~RlWead~~G 247 (726)
T KOG3621|consen 192 ILCQTEAETITQIGKKPRKSLIDFGACFFPGQC---KA-QKPQIYCARPGLRLWEADFAG 247 (726)
T ss_pred heeecchhHHHHhcCCCcCCccccceEEeeccc---cC-CCceEEEecCCCceEEeecce
Confidence 344444332111111 11121 34556666411 11 123455566778899665543
No 340
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=97.81 E-value=0.026 Score=52.14 Aligned_cols=190 Identities=12% Similarity=0.022 Sum_probs=121.6
Q ss_pred CeEEEEECC-CCCEEEEEECCC-eEEEEECCC-ceEEEecCccCCe--EEEEEecCCCEEEEEec-----CCeEEEEEcC
Q 010754 276 DVTTLDWNG-EGTLLATGSYDG-QARIWSTNG-DLKCTLSKHKGPI--FSLKWNKKGDYLLTGSC-----DKTAIVWDVK 345 (502)
Q Consensus 276 ~v~~l~~s~-~g~~l~s~~~dg-~i~iwd~~~-~~~~~~~~~~~~v--~~l~~~~~~~~l~s~~~-----d~~i~~wd~~ 345 (502)
....++.+| .+..++.+-.-| ...+||..+ .....+....+.- =.-+|+++|++|++.-. .|.|-|||..
T Consensus 6 RgH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~ 85 (305)
T PF07433_consen 6 RGHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAA 85 (305)
T ss_pred cccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECc
Confidence 355677888 556666776665 456788664 3333443322221 13579999999998643 5789999998
Q ss_pred -CCceEEEEeeccCCeEEEEecCCC-EEEEEe------------------CCCeEEEEEcCCCcceEEEe----cCCCcE
Q 010754 346 -TEEWKQQFEFHSGPTLDVDWRNNV-SFATSS------------------TDNMIYVCKIGENRPIKTFA----GHQGEV 401 (502)
Q Consensus 346 -~~~~~~~~~~~~~~v~~v~~~~~~-~~~~~~------------------~d~~i~i~d~~~~~~~~~~~----~h~~~i 401 (502)
+.+.+..+..+.-..-.+.+.+++ .++++. .+-.+...|..+++.+.+.. -|...|
T Consensus 86 ~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSi 165 (305)
T PF07433_consen 86 RGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSI 165 (305)
T ss_pred CCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccce
Confidence 666777777776666777777766 454442 23345566777887776633 367789
Q ss_pred EEEEEcCCCCEEEEEeCCCc-------EEEEECCCCeeEEEec-------cCCCcEEEEEEccCCCCCCCCCccEEEEee
Q 010754 402 NCVKWDPTGSLLASCSDDVT-------AKIWNMKQDKYVHDLR-------EHSKEIYTIRWSPTGSGTNNPNQQLILARL 467 (502)
Q Consensus 402 ~~l~~sp~g~~las~s~dg~-------i~iwd~~~~~~~~~~~-------~h~~~i~~v~~sp~g~~~~~~~~~l~las~ 467 (502)
..++++++|..++.+-..|. |-+++... .+..+. .-.+.|-+|+++++|. . +.+|+
T Consensus 166 RHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~--~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~-------~-ia~ts 235 (305)
T PF07433_consen 166 RHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGG--ALRLLPAPEEQWRRLNGYIGSIAADRDGR-------L-IAVTS 235 (305)
T ss_pred eeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCC--cceeccCChHHHHhhCCceEEEEEeCCCC-------E-EEEEC
Confidence 99999999988777655442 44454332 222222 2345689999999997 2 33333
Q ss_pred --cCceEEEE
Q 010754 468 --IPYFLYWI 475 (502)
Q Consensus 468 --~~~~~iw~ 475 (502)
.+.+.+|+
T Consensus 236 PrGg~~~~~d 245 (305)
T PF07433_consen 236 PRGGRVAVWD 245 (305)
T ss_pred CCCCEEEEEE
Confidence 25677773
No 341
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.79 E-value=0.00085 Score=69.99 Aligned_cols=135 Identities=15% Similarity=0.195 Sum_probs=100.6
Q ss_pred ecCCeEEEEEcCCCceEEEEeeccCC-eEEEEec------CCCEEEEEeCCCeEEEEEcCCCc--ceE----EEecCCCc
Q 010754 334 SCDKTAIVWDVKTEEWKQQFEFHSGP-TLDVDWR------NNVSFATSSTDNMIYVCKIGENR--PIK----TFAGHQGE 400 (502)
Q Consensus 334 ~~d~~i~~wd~~~~~~~~~~~~~~~~-v~~v~~~------~~~~~~~~~~d~~i~i~d~~~~~--~~~----~~~~h~~~ 400 (502)
.....|+-.|+.+|+.+..+..+... |.+++-. .+...++|-.++.+..||.|-.. .+. .+ .....
T Consensus 501 ~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y-~~~~~ 579 (794)
T PF08553_consen 501 NNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQY-SSKNN 579 (794)
T ss_pred CCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeecccccc-ccCCC
Confidence 34678999999999999999987754 6666542 13346778889999999998643 221 11 23456
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEeee
Q 010754 401 VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICSI 478 (502)
Q Consensus 401 i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~ 478 (502)
.+|++-+.+| +||.||.+|.||+||--..+.-..+.+-..||..|..+.||. .++|+....+.+....+
T Consensus 580 Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGk--------wilaTc~tyLlLi~t~~ 648 (794)
T PF08553_consen 580 FSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGK--------WILATCKTYLLLIDTLI 648 (794)
T ss_pred ceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCc--------EEEEeecceEEEEEEee
Confidence 8888888777 789999999999999432222334556788999999999997 78999998888876543
No 342
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=97.77 E-value=0.00015 Score=71.27 Aligned_cols=92 Identities=24% Similarity=0.302 Sum_probs=79.0
Q ss_pred CCeEEEEECCCCCEEEEEECCCeEEEEECCCceEEEecCccCCeE-EEEEecCCCEEEEEecCCeEEEEEcCCCceEEEE
Q 010754 275 KDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIF-SLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 353 (502)
Q Consensus 275 ~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~-~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~ 353 (502)
..|.-+.|+|.-.++|.+..+|.|-+..++-..+.++.-+...++ +++|.|+|+.|++|-.||+|++.|+.++..+..+
T Consensus 21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~~ 100 (665)
T KOG4640|consen 21 INIKRIEWNPKMDLIATRTEKGELLIHRLNWQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVSF 100 (665)
T ss_pred cceEEEEEcCccchhheeccCCcEEEEEeccceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceecc
Confidence 458899999999999999999999999998777888887777777 9999999999999999999999999999877764
Q ss_pred ee-ccCCeEEEEec
Q 010754 354 EF-HSGPTLDVDWR 366 (502)
Q Consensus 354 ~~-~~~~v~~v~~~ 366 (502)
.. -...|.++.|.
T Consensus 101 ~~s~e~~is~~~w~ 114 (665)
T KOG4640|consen 101 LFSVETDISKGIWD 114 (665)
T ss_pred ccccccchheeecc
Confidence 22 34467777775
No 343
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=97.73 E-value=0.0042 Score=61.41 Aligned_cols=182 Identities=8% Similarity=-0.034 Sum_probs=106.3
Q ss_pred eEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC--CCCEEEEEECCCeEEEEECCC-
Q 010754 229 LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG--EGTLLATGSYDGQARIWSTNG- 305 (502)
Q Consensus 229 ~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~--~g~~l~s~~~dg~i~iwd~~~- 305 (502)
.++.++.+|.+..+|..+++......... ..... .......+.-+| .+..++.++.+|.+..+|...
T Consensus 207 ~v~~~~~~g~v~a~d~~~G~~~W~~~~~~--------~~~~~--~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG 276 (394)
T PRK11138 207 GAIVGGDNGRVSAVLMEQGQLIWQQRISQ--------PTGAT--EIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSG 276 (394)
T ss_pred EEEEEcCCCEEEEEEccCChhhheecccc--------CCCcc--chhcccccCCCcEEECCEEEEEEcCCeEEEEECCCC
Confidence 46667778888888888776432211000 00000 000000011112 245677778889999999764
Q ss_pred ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCC-eEEEEecCCCEEEEEeCCCeEEEEE
Q 010754 306 DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP-TLDVDWRNNVSFATSSTDNMIYVCK 384 (502)
Q Consensus 306 ~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~-v~~v~~~~~~~~~~~~~d~~i~i~d 384 (502)
+.+..... . ....+. ..+..++.++.+|.+..+|..+++.+......... ..... ..++.+++++.+|.++++|
T Consensus 277 ~~~W~~~~-~-~~~~~~--~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~-v~~g~l~v~~~~G~l~~ld 351 (394)
T PRK11138 277 QIVWKREY-G-SVNDFA--VDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPV-LYNGYLVVGDSEGYLHWIN 351 (394)
T ss_pred CEEEeecC-C-CccCcE--EECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCE-EECCEEEEEeCCCEEEEEE
Confidence 33333221 1 111222 24567888889999999999999876544321111 11111 1266788899999999999
Q ss_pred cCCCcceEEEecCCCcEEE-EEEcCCCCEEEEEeCCCcEEEEEC
Q 010754 385 IGENRPIKTFAGHQGEVNC-VKWDPTGSLLASCSDDVTAKIWNM 427 (502)
Q Consensus 385 ~~~~~~~~~~~~h~~~i~~-l~~sp~g~~las~s~dg~i~iwd~ 427 (502)
..+++.+....-....+.+ ..+ .+..|+.++.||.|+.++.
T Consensus 352 ~~tG~~~~~~~~~~~~~~s~P~~--~~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 352 REDGRFVAQQKVDSSGFLSEPVV--ADDKLLIQARDGTVYAITR 393 (394)
T ss_pred CCCCCEEEEEEcCCCcceeCCEE--ECCEEEEEeCCceEEEEeC
Confidence 9999988777644333322 222 2457888899999888764
No 344
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.71 E-value=0.00011 Score=44.66 Aligned_cols=38 Identities=47% Similarity=0.823 Sum_probs=34.2
Q ss_pred cceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 010754 389 RPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWN 426 (502)
Q Consensus 389 ~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd 426 (502)
.++..+..|...|+++.|++.+.++++++.|+.+++|+
T Consensus 3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 45667778899999999999999999999999999996
No 345
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.71 E-value=0.027 Score=52.71 Aligned_cols=59 Identities=12% Similarity=0.280 Sum_probs=42.8
Q ss_pred eEEEEEcCCCcceEEEecCCCcEEEEEEcCCCC-EEEEE-eCCCcEEEEECCCCeeEEEecc
Q 010754 379 MIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS-LLASC-SDDVTAKIWNMKQDKYVHDLRE 438 (502)
Q Consensus 379 ~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~-~las~-s~dg~i~iwd~~~~~~~~~~~~ 438 (502)
.|.++|+.+++.+.++.. ..++.+|..+.+.+ +|++. ..++.|.|||..+|+.++++..
T Consensus 270 eVWv~D~~t~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~ 330 (342)
T PF06433_consen 270 EVWVYDLKTHKRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQ 330 (342)
T ss_dssp EEEEEETTTTEEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE--
T ss_pred EEEEEECCCCeEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhc
Confidence 377788888888888763 34577899988766 55544 4589999999999999998873
No 346
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.70 E-value=9.5e-05 Score=44.94 Aligned_cols=37 Identities=43% Similarity=0.735 Sum_probs=33.5
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEe
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWT 243 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~ 243 (502)
.+..+.+|...|.++.|++.+.++++++.|+.+++|+
T Consensus 4 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 4 LLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 4566778999999999999999999999999999996
No 347
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=97.67 E-value=0.075 Score=52.98 Aligned_cols=217 Identities=14% Similarity=0.237 Sum_probs=119.7
Q ss_pred ceEEEEEcCCCCeEEEE-eCCC----cEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEE
Q 010754 217 EVCACAWSPAGSLLASG-SGDS----TARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLAT 291 (502)
Q Consensus 217 ~V~~~~~~p~~~~l~sg-s~dg----~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s 291 (502)
.+..++++|+|++||.+ +..| +++++|+.+++.+. ..+.. .....+.|.++++.|+.
T Consensus 125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~------------d~i~~------~~~~~~~W~~d~~~~~y 186 (414)
T PF02897_consen 125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLP------------DGIEN------PKFSSVSWSDDGKGFFY 186 (414)
T ss_dssp EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEE------------EEEEE------EESEEEEECTTSSEEEE
T ss_pred EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcC------------Ccccc------cccceEEEeCCCCEEEE
Confidence 34568899999988865 3333 59999999875321 01110 01234999999988776
Q ss_pred EECCC-----------eEEEEECCCce---EEEecCccCC--eEEEEEecCCCEEEEEecC----CeEEEEEcCCC----
Q 010754 292 GSYDG-----------QARIWSTNGDL---KCTLSKHKGP--IFSLKWNKKGDYLLTGSCD----KTAIVWDVKTE---- 347 (502)
Q Consensus 292 ~~~dg-----------~i~iwd~~~~~---~~~~~~~~~~--v~~l~~~~~~~~l~s~~~d----~~i~~wd~~~~---- 347 (502)
...+. .|+.|.+.... ...+...... ...+..++++++|+..+.. ..+.+.|+..+
T Consensus 187 ~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~ 266 (414)
T PF02897_consen 187 TRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPD 266 (414)
T ss_dssp EECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS
T ss_pred EEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCc
Confidence 66443 36777765321 2344443333 5688889999988754332 35788888764
Q ss_pred -ceEEEEeeccCCeEEEEecCCCEEEEE---eCCCeEEEEEcCCCcc---eEEEecCCCc--EEEEEEcCCCCEE-EEEe
Q 010754 348 -EWKQQFEFHSGPTLDVDWRNNVSFATS---STDNMIYVCKIGENRP---IKTFAGHQGE--VNCVKWDPTGSLL-ASCS 417 (502)
Q Consensus 348 -~~~~~~~~~~~~v~~v~~~~~~~~~~~---~~d~~i~i~d~~~~~~---~~~~~~h~~~--i~~l~~sp~g~~l-as~s 417 (502)
..........+....+....+..++.. ...+.|...++..... ...+..+... +..+.. .+.+| +...
T Consensus 267 ~~~~~l~~~~~~~~~~v~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~--~~~~Lvl~~~ 344 (414)
T PF02897_consen 267 AKPKLLSPREDGVEYYVDHHGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSL--FKDYLVLSYR 344 (414)
T ss_dssp -SEEEEEESSSS-EEEEEEETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEE--ETTEEEEEEE
T ss_pred CCcEEEeCCCCceEEEEEccCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEE--ECCEEEEEEE
Confidence 333333333344445555544444443 2346777788877653 2355556553 445544 34444 4444
Q ss_pred CCC--cEEEEECCCCeeEEEec-cCCCcEEEEEEccCCC
Q 010754 418 DDV--TAKIWNMKQDKYVHDLR-EHSKEIYTIRWSPTGS 453 (502)
Q Consensus 418 ~dg--~i~iwd~~~~~~~~~~~-~h~~~i~~v~~sp~g~ 453 (502)
.++ .|++|++..+.....+. .-.+.|..+...+++.
T Consensus 345 ~~~~~~l~v~~~~~~~~~~~~~~p~~g~v~~~~~~~~~~ 383 (414)
T PF02897_consen 345 ENGSSRLRVYDLDDGKESREIPLPEAGSVSGVSGDFDSD 383 (414)
T ss_dssp ETTEEEEEEEETT-TEEEEEEESSSSSEEEEEES-TT-S
T ss_pred ECCccEEEEEECCCCcEEeeecCCcceEEeccCCCCCCC
Confidence 454 48899988344444443 2334466665555544
No 348
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=97.67 E-value=0.008 Score=58.67 Aligned_cols=201 Identities=13% Similarity=0.142 Sum_probs=109.8
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecC--ccccCCCCeEEEEECC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKG--RTNEKSKDVTTLDWNG 284 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~l~~s~ 284 (502)
+...++...++|++++.| +=-++|.|..+|.+.|.|++....+ ....+.. ........|+++.|+-
T Consensus 78 P~~l~~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI-----------~~~~i~~~~~~~~~~~~vt~ieF~v 145 (395)
T PF08596_consen 78 PLTLLDAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVI-----------YNENIRESFLSKSSSSYVTSIEFSV 145 (395)
T ss_dssp EEEEE---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEE-----------EEEEGGG--T-SS----EEEEEEEE
T ss_pred chhheeccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEE-----------eeccccccccccccccCeeEEEEEE
Confidence 345666678999999998 5458999999999999999765422 1222222 2223455688888862
Q ss_pred -----CC---CEEEEEECCCeEEEEECC----CceE----EEecCccCCeEEEE-EecC-----------------C---
Q 010754 285 -----EG---TLLATGSYDGQARIWSTN----GDLK----CTLSKHKGPIFSLK-WNKK-----------------G--- 327 (502)
Q Consensus 285 -----~g---~~l~s~~~dg~i~iwd~~----~~~~----~~~~~~~~~v~~l~-~~~~-----------------~--- 327 (502)
|+ -.+++|+..|.+.+|.+. +... .....+.++|..+. ++.+ +
T Consensus 146 m~~~~D~ySSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i 225 (395)
T PF08596_consen 146 MTLGGDGYSSICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISI 225 (395)
T ss_dssp EE-TTSSSEEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT---
T ss_pred EecCCCcccceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCc
Confidence 33 478899999999999743 2111 12224556766665 3221 1
Q ss_pred CEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEec------CCCEEEEEeCCCeEEEEEcCCCcceEEEecCC---
Q 010754 328 DYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR------NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQ--- 398 (502)
Q Consensus 328 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~------~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~--- 398 (502)
+-++....+..++++...+.+..+......-.+..+.+. ....+++-..+|.|++|.+..-+.+..+.-..
T Consensus 226 ~g~vVvvSe~~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d 305 (395)
T PF08596_consen 226 PGYVVVVSESDIRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLD 305 (395)
T ss_dssp -EEEEEE-SSEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---
T ss_pred CcEEEEEcccceEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCccc
Confidence 234555668899999988877665544221222333342 23447778899999999999988887776532
Q ss_pred -CcEEEEEEcCCCCEEEEEeCC
Q 010754 399 -GEVNCVKWDPTGSLLASCSDD 419 (502)
Q Consensus 399 -~~i~~l~~sp~g~~las~s~d 419 (502)
..+....++++|..++-.+..
T Consensus 306 ~~~~~~ssis~~Gdi~~~~gps 327 (395)
T PF08596_consen 306 SRRLSSSSISRNGDIFYWTGPS 327 (395)
T ss_dssp HHHHTT-EE-TTS-EEEE-SSS
T ss_pred cccccccEECCCCCEEEEeCcc
Confidence 123456678888877666543
No 349
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.64 E-value=0.0045 Score=54.50 Aligned_cols=113 Identities=12% Similarity=-0.026 Sum_probs=83.9
Q ss_pred CCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEE
Q 010754 327 GDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKW 406 (502)
Q Consensus 327 ~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~ 406 (502)
..+++.|+..+.+.-.|..+|..+..-.. ...+-+-+..-++.++.|+..|.+++.+..++..+..|..-..-=.....
T Consensus 23 kT~v~igSHs~~~~avd~~sG~~~We~il-g~RiE~sa~vvgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~ 101 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSGNLIWEAIL-GVRIECSAIVVGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQC 101 (354)
T ss_pred ceEEEEecCCceEEEecCCCCcEEeehhh-CceeeeeeEEECCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEE
Confidence 35777888889999999998886654321 12222222224556899999999999999999888887654332234556
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCC
Q 010754 407 DPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHS 440 (502)
Q Consensus 407 sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~ 440 (502)
.+++.++..|+.|+..+.-|.++..++...+-..
T Consensus 102 d~~~glIycgshd~~~yalD~~~~~cVykskcgG 135 (354)
T KOG4649|consen 102 DFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGG 135 (354)
T ss_pred cCCCceEEEecCCCcEEEecccccceEEecccCC
Confidence 7889999999999999999999999998876433
No 350
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.63 E-value=0.023 Score=50.28 Aligned_cols=142 Identities=14% Similarity=0.075 Sum_probs=87.6
Q ss_pred CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCCc
Q 010754 227 GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD 306 (502)
Q Consensus 227 ~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~ 306 (502)
..+++.||..+.+.--|..+++....... + ..|.+-+.- -|++++.|++.|.+++.+.++.
T Consensus 23 kT~v~igSHs~~~~avd~~sG~~~We~il------------g------~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tG 83 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSGNLIWEAIL------------G------VRIECSAIV-VGDFVVLGCYSGGLYFLCVKTG 83 (354)
T ss_pred ceEEEEecCCceEEEecCCCCcEEeehhh------------C------ceeeeeeEE-ECCEEEEEEccCcEEEEEecch
Confidence 45777888888888888777764321110 0 112211111 3678999999999999998754
Q ss_pred -eEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecC-CCEEEEEeCCCeEEEEE
Q 010754 307 -LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCK 384 (502)
Q Consensus 307 -~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~~~~d~~i~i~d 384 (502)
+...+.....--......+++..+..++.|++.+..|.++..++...+...+...+-+..+ +..+..+...|.+.-..
T Consensus 84 s~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~a~t~G~vlavt 163 (354)
T KOG4649|consen 84 SQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAAITAGAVLAVT 163 (354)
T ss_pred hheeeeeehhhhccceEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccceecCCCceEEEEeccceEEEEc
Confidence 4444443322222334567899999999999999999999888877654433332223333 44455555666655444
Q ss_pred cCC
Q 010754 385 IGE 387 (502)
Q Consensus 385 ~~~ 387 (502)
...
T Consensus 164 ~~~ 166 (354)
T KOG4649|consen 164 KNP 166 (354)
T ss_pred cCC
Confidence 433
No 351
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.63 E-value=0.0065 Score=62.57 Aligned_cols=184 Identities=14% Similarity=0.167 Sum_probs=104.3
Q ss_pred CceEEEEEcCCCCeEEEEe------CCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEE
Q 010754 216 SEVCACAWSPAGSLLASGS------GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 289 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l 289 (502)
..+...+.+|+|..+|... .|..-.||-...+.... . + .. ....+.-.|+|+|..|
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~----------~---l---t~--g~~~t~PsWspDG~~l 411 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAV----------Q---V---LE--GHSLTRPSWSLDADAV 411 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcce----------e---e---ec--CCCCCCceECCCCCce
Confidence 4678899999998877665 35555555443221100 0 0 00 1237788899998877
Q ss_pred EEEECC------------CeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEE---EEcCCCce-E---
Q 010754 290 ATGSYD------------GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIV---WDVKTEEW-K--- 350 (502)
Q Consensus 290 ~s~~~d------------g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~---wd~~~~~~-~--- 350 (502)
++.... +.+.+.++++..... ...+.|..+.|+|+|..++... ++.|++ -....|.. +
T Consensus 412 w~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~--~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~ 488 (591)
T PRK13616 412 WVVVDGNTVVRVIRDPATGQLARTPVDASAVAS--RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNP 488 (591)
T ss_pred EEEecCcceEEEeccCCCceEEEEeccCchhhh--ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeeccc
Confidence 776532 223333333322211 3356799999999999888765 577777 44344431 1
Q ss_pred EEEee-ccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEE-ec--CCCcEEEEEEcCCCCEEEEEeCCCcE
Q 010754 351 QQFEF-HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTF-AG--HQGEVNCVKWDPTGSLLASCSDDVTA 422 (502)
Q Consensus 351 ~~~~~-~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~-~~--h~~~i~~l~~sp~g~~las~s~dg~i 422 (502)
..+.. ....+.++.|.++..|+++..++...+|.+.-.-...+. .+ ....+..|+-+++ .|+....+|.+
T Consensus 489 ~~l~~~l~~~~~~l~W~~~~~L~V~~~~~~~~v~~v~vDG~~~~~~~~~n~~~~v~~vaa~~~--~iyv~~~~g~~ 562 (591)
T PRK13616 489 REVGPGLGDTAVSLDWRTGDSLVVGRSDPEHPVWYVNLDGSNSDALPSRNLSAPVVAVAASPS--TVYVTDARAVL 562 (591)
T ss_pred EEeecccCCccccceEecCCEEEEEecCCCCceEEEecCCccccccCCCCccCceEEEecCCc--eEEEEcCCceE
Confidence 11222 223468899999888887766555445544322221222 32 2456777777763 34455556643
No 352
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=97.60 E-value=0.032 Score=54.70 Aligned_cols=215 Identities=14% Similarity=0.151 Sum_probs=139.3
Q ss_pred EEEEEcCCCC-eEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEEC---
Q 010754 219 CACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY--- 294 (502)
Q Consensus 219 ~~~~~~p~~~-~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~--- 294 (502)
..++.++.+. .+++...+..|.+.|....+..... .. ......++++++++.+.++..
T Consensus 77 ~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~------------~v------G~~P~~~~~~~~~~~vYV~n~~~~ 138 (381)
T COG3391 77 AGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSI------------PV------GLGPVGLAVDPDGKYVYVANAGNG 138 (381)
T ss_pred cceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEe------------ee------ccCCceEEECCCCCEEEEEecccC
Confidence 4678888776 5555555688999996654432111 00 114678899999988877766
Q ss_pred CCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEe-cCCeEEEEEcCCCceEE-E----EeeccCCeEEEEecC
Q 010754 295 DGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGS-CDKTAIVWDVKTEEWKQ-Q----FEFHSGPTLDVDWRN 367 (502)
Q Consensus 295 dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~-~d~~i~~wd~~~~~~~~-~----~~~~~~~v~~v~~~~ 367 (502)
++.+.+.|... ........-..+ ..++++|+|+.++.+. .++.|.+.|..+....+ . +. .......+.+.+
T Consensus 139 ~~~vsvid~~t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~-~~~~P~~i~v~~ 216 (381)
T COG3391 139 NNTVSVIDAATNKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVG-VGTGPAGIAVDP 216 (381)
T ss_pred CceEEEEeCCCCeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccc-cCCCCceEEECC
Confidence 68888888664 333343333345 8999999999777665 68899999977665543 1 11 112234455555
Q ss_pred CCE--EEEEeCC--CeEEEEEcCCCcceEE-EecCCCcEEEEEEcCCCCEEEEEeC-CCcEEEEECCCCeeEEEeccCC-
Q 010754 368 NVS--FATSSTD--NMIYVCKIGENRPIKT-FAGHQGEVNCVKWDPTGSLLASCSD-DVTAKIWNMKQDKYVHDLREHS- 440 (502)
Q Consensus 368 ~~~--~~~~~~d--~~i~i~d~~~~~~~~~-~~~h~~~i~~l~~sp~g~~las~s~-dg~i~iwd~~~~~~~~~~~~h~- 440 (502)
++. +++...+ +.+...|..++..... +..-......+..+|+|+++..... .+.+.+-|..+......+....
T Consensus 217 ~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~~~~ 296 (381)
T COG3391 217 DGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGPTGNE 296 (381)
T ss_pred CCCEEEEEeccCCCceEEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeeccccc
Confidence 443 3333333 5888899888776654 2211114567899999999888754 4889999999888777655332
Q ss_pred --CcEEEEEEccCCC
Q 010754 441 --KEIYTIRWSPTGS 453 (502)
Q Consensus 441 --~~i~~v~~sp~g~ 453 (502)
..+..+++.+...
T Consensus 297 ~~~~~~~~~~~~~~~ 311 (381)
T COG3391 297 ALGEPVSIAISPLYD 311 (381)
T ss_pred ccccceeccceeecc
Confidence 2466777777654
No 353
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=97.58 E-value=0.0023 Score=63.05 Aligned_cols=176 Identities=16% Similarity=0.210 Sum_probs=106.4
Q ss_pred CCeEEEEECCCCCEEEEEEC---C-CeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEE-EecCC--eEEEEEcCCC
Q 010754 275 KDVTTLDWNGEGTLLATGSY---D-GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLT-GSCDK--TAIVWDVKTE 347 (502)
Q Consensus 275 ~~v~~l~~s~~g~~l~s~~~---d-g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s-~~~d~--~i~~wd~~~~ 347 (502)
..+..-+|+|++..++..+. . ..+.+++++...........+.-..-+|+|+|+.|+. ...|| .|.++|+.++
T Consensus 193 ~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~ 272 (425)
T COG0823 193 SLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGK 272 (425)
T ss_pred cceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCccCCccCCCCCCEEEEEECCCCCccEEEEcCCCC
Confidence 34667789999887655432 2 3588889875444433334455566789999987774 44566 4667788777
Q ss_pred ceEEEEeeccCCeEEEEecCCCE-E-EEEeCCCe--EEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCC-Cc-
Q 010754 348 EWKQQFEFHSGPTLDVDWRNNVS-F-ATSSTDNM--IYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD-VT- 421 (502)
Q Consensus 348 ~~~~~~~~~~~~v~~v~~~~~~~-~-~~~~~d~~--i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~d-g~- 421 (502)
...+ +....+.-..-.|+|++. + .+.+..|. |.+++...+.. ..+....+.-..-.|+|+|++|+..+.. |.
T Consensus 273 ~~~~-Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~ 350 (425)
T COG0823 273 NLPR-LTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-TRLTFSGGGNSNPVWSPDGDKIVFESSSGGQW 350 (425)
T ss_pred ccee-cccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce-eEeeccCCCCcCccCCCCCCEEEEEeccCCce
Confidence 6333 443333334556777665 3 33444444 56666665554 3333233333377899999999887753 44
Q ss_pred -EEEEECCCCeeEEEeccCCCcEEEEEEccCCC
Q 010754 422 -AKIWNMKQDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 422 -i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
|.+.|+.++.-+..+. +......-.|.|+|.
T Consensus 351 ~i~~~~~~~~~~~~~lt-~~~~~e~ps~~~ng~ 382 (425)
T COG0823 351 DIDKNDLASGGKIRILT-STYLNESPSWAPNGR 382 (425)
T ss_pred eeEEeccCCCCcEEEcc-ccccCCCCCcCCCCc
Confidence 6666666655444443 333345667888887
No 354
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=97.57 E-value=0.00038 Score=68.44 Aligned_cols=92 Identities=16% Similarity=0.290 Sum_probs=76.7
Q ss_pred CCeEEEEecCCC-EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEE-EEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEE
Q 010754 358 GPTLDVDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVN-CVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD 435 (502)
Q Consensus 358 ~~v~~v~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~-~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~ 435 (502)
..+.-+.|.|.. .+|++..+|.|.++.+. .+.+.++..|...++ +++|.|||++||.|-.||+|++-|+.++..+..
T Consensus 21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~ 99 (665)
T KOG4640|consen 21 INIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVS 99 (665)
T ss_pred cceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceec
Confidence 346778898864 57888999999999988 778888987877777 999999999999999999999999999988876
Q ss_pred ec-cCCCcEEEEEEcc
Q 010754 436 LR-EHSKEIYTIRWSP 450 (502)
Q Consensus 436 ~~-~h~~~i~~v~~sp 450 (502)
.. ....+|.++.|.|
T Consensus 100 ~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 100 FLFSVETDISKGIWDR 115 (665)
T ss_pred cccccccchheeeccc
Confidence 32 2455788888874
No 355
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.56 E-value=0.017 Score=58.36 Aligned_cols=147 Identities=11% Similarity=0.040 Sum_probs=89.7
Q ss_pred ECCCCCEEEEE-ECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEe--------------------------
Q 010754 282 WNGEGTLLATG-SYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGS-------------------------- 334 (502)
Q Consensus 282 ~s~~g~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~-------------------------- 334 (502)
++|||+.+... -+.+.+.+.|.+...+.....-.+....+.++|+|+++++.+
T Consensus 200 lpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~ 279 (635)
T PRK02888 200 LPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIA 279 (635)
T ss_pred cCCCCCEeecccceeEEEEEEECccceEEEEEEeCCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchH
Confidence 45677655333 234677777766533221111122335566777777776654
Q ss_pred --------------cCCeEEEEEcCC----CceEEEEeeccCCeEEEEecCCCE--EEEEeCCCeEEEEEcCCCcc----
Q 010754 335 --------------CDKTAIVWDVKT----EEWKQQFEFHSGPTLDVDWRNNVS--FATSSTDNMIYVCKIGENRP---- 390 (502)
Q Consensus 335 --------------~d~~i~~wd~~~----~~~~~~~~~~~~~v~~v~~~~~~~--~~~~~~d~~i~i~d~~~~~~---- 390 (502)
.++.|.+.|.++ +..+..+-.-......+.++|++. ++++..+.++.|+|+.+.+.
T Consensus 280 ~iea~vkdGK~~~V~gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~ 359 (635)
T PRK02888 280 RIEEAVKAGKFKTIGGSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDG 359 (635)
T ss_pred HHHHhhhCCCEEEECCCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhc
Confidence 124577777766 222222222344556777888766 45556789999999987553
Q ss_pred --------eEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 010754 391 --------IKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ 429 (502)
Q Consensus 391 --------~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~ 429 (502)
+....- .......+|+++|+...|.--|..|..||+.+
T Consensus 360 ~~~~~~~vvaevev-GlGPLHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 360 KIKPRDAVVAEPEL-GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred cCCccceEEEeecc-CCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence 222222 22344678999999888888899999999876
No 356
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.54 E-value=0.0036 Score=65.44 Aligned_cols=142 Identities=8% Similarity=0.036 Sum_probs=97.0
Q ss_pred CCCEEEEE-ECCCeEEEEECC-CceEEEecCccCC-eEEEEEec-----CCCEEEEEecCCeEEEEEcCCCc--eEEE-E
Q 010754 285 EGTLLATG-SYDGQARIWSTN-GDLKCTLSKHKGP-IFSLKWNK-----KGDYLLTGSCDKTAIVWDVKTEE--WKQQ-F 353 (502)
Q Consensus 285 ~g~~l~s~-~~dg~i~iwd~~-~~~~~~~~~~~~~-v~~l~~~~-----~~~~l~s~~~d~~i~~wd~~~~~--~~~~-~ 353 (502)
+.++|+.- .....|+-.|++ |+.+.....+... |..++-.. +....+.|-.++.+..||.|-.. ++.. .
T Consensus 492 d~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~ 571 (794)
T PF08553_consen 492 DRNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQS 571 (794)
T ss_pred ccceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccc
Confidence 33444443 344678888876 6677777766543 55553221 13356677889999999998643 2211 1
Q ss_pred --eeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 010754 354 --EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNM 427 (502)
Q Consensus 354 --~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~ 427 (502)
........+++-..++.+|+|+.+|.||+||--..+.-..+.+-..+|.+|..+.||++|++.+.. .|.+++.
T Consensus 572 k~Y~~~~~Fs~~aTt~~G~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~t-yLlLi~t 646 (794)
T PF08553_consen 572 KQYSSKNNFSCFATTEDGYIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATCKT-YLLLIDT 646 (794)
T ss_pred cccccCCCceEEEecCCceEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEeecc-eEEEEEE
Confidence 113345678888899999999999999999954444444566778999999999999998766644 6777774
No 357
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=97.54 E-value=0.025 Score=54.95 Aligned_cols=210 Identities=14% Similarity=0.213 Sum_probs=113.7
Q ss_pred cCCCCeEEEEe---------CCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEEC
Q 010754 224 SPAGSLLASGS---------GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY 294 (502)
Q Consensus 224 ~p~~~~l~sgs---------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~ 294 (502)
|||+++++... ..+.+.|||+.+++... +... ...+....|||+|+.++...
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~--------------l~~~----~~~~~~~~~sP~g~~~~~v~- 61 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITP--------------LTPP----PPKLQDAKWSPDGKYIAFVR- 61 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEE--------------SS-E----ETTBSEEEE-SSSTEEEEEE-
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEE--------------CcCC----ccccccceeecCCCeeEEEe-
Confidence 57777666532 23678889988864311 1000 34688999999999998887
Q ss_pred CCeEEEEECCCceEEEecCc------------------cCCeEEEEEecCCCEEEEEecC-Ce-----------------
Q 010754 295 DGQARIWSTNGDLKCTLSKH------------------KGPIFSLKWNKKGDYLLTGSCD-KT----------------- 338 (502)
Q Consensus 295 dg~i~iwd~~~~~~~~~~~~------------------~~~v~~l~~~~~~~~l~s~~~d-~~----------------- 338 (502)
++.|.+++..+.....+... -+.-..+-|||+|++|+....| ..
T Consensus 62 ~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp 141 (353)
T PF00930_consen 62 DNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYP 141 (353)
T ss_dssp TTEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-
T ss_pred cCceEEEECCCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCC
Confidence 58899998754433322211 1223578899999999876544 22
Q ss_pred ------------------EEEEEcCCCceEEE-Ee----eccCCeEEEEecCCCE-EEEEeCC-----CeEEEEEcCCCc
Q 010754 339 ------------------AIVWDVKTEEWKQQ-FE----FHSGPTLDVDWRNNVS-FATSSTD-----NMIYVCKIGENR 389 (502)
Q Consensus 339 ------------------i~~wd~~~~~~~~~-~~----~~~~~v~~v~~~~~~~-~~~~~~d-----~~i~i~d~~~~~ 389 (502)
+.++|+.+++.... .. ....-+..+.|.+++. |+..-.+ ..+.++|..++.
T Consensus 142 ~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~ 221 (353)
T PF00930_consen 142 EVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGE 221 (353)
T ss_dssp EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTT
T ss_pred cccccccCCCCCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCc
Confidence 23334433332110 00 1122366778876665 5544322 246777887765
Q ss_pred ceEEEec-CCCcE---EEEEEc-CCCC-EEEEEeCCCc--EEEEECCCCeeEEEeccCCCcEEE-EEEccCCC
Q 010754 390 PIKTFAG-HQGEV---NCVKWD-PTGS-LLASCSDDVT--AKIWNMKQDKYVHDLREHSKEIYT-IRWSPTGS 453 (502)
Q Consensus 390 ~~~~~~~-h~~~i---~~l~~s-p~g~-~las~s~dg~--i~iwd~~~~~~~~~~~~h~~~i~~-v~~sp~g~ 453 (502)
....+.. ..+.| ..+.|. +++. +|.....||. |.+.+...+. ...+....-.|.. +.|++++.
T Consensus 222 ~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~-~~~lT~G~~~V~~i~~~d~~~~ 293 (353)
T PF00930_consen 222 TRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGK-PRQLTSGDWEVTSILGWDEDNN 293 (353)
T ss_dssp CEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSE-EEESS-SSS-EEEEEEEECTSS
T ss_pred eeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEcccccc-eeccccCceeecccceEcCCCC
Confidence 4333322 12222 244554 5554 4555556775 4555555555 3455544555755 67888876
No 358
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.52 E-value=0.015 Score=44.80 Aligned_cols=100 Identities=15% Similarity=0.136 Sum_probs=70.2
Q ss_pred eEEEEEec---CC-CEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEE
Q 010754 318 IFSLKWNK---KG-DYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKT 393 (502)
Q Consensus 318 v~~l~~~~---~~-~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~ 393 (502)
|++|++.. +| +.|++|+.|..|++|+- ...+..+. ....+..++......|+.+..+|+|-+|+-. ..+..
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~--~e~~~Ei~-e~~~v~~L~~~~~~~F~Y~l~NGTVGvY~~~--~RlWR 76 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKG--DEIVAEIT-ETDKVTSLCSLGGGRFAYALANGTVGVYDRS--QRLWR 76 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeC--CcEEEEEe-cccceEEEEEcCCCEEEEEecCCEEEEEeCc--ceeee
Confidence 56677654 33 68999999999999974 35566555 4556888888888999999999999999753 23344
Q ss_pred EecCCCcEEEEEEcC-CC---CEEEEEeCCCcEE
Q 010754 394 FAGHQGEVNCVKWDP-TG---SLLASCSDDVTAK 423 (502)
Q Consensus 394 ~~~h~~~i~~l~~sp-~g---~~las~s~dg~i~ 423 (502)
.+. ...++++.+.. ++ .-|++|-.+|.|-
T Consensus 77 iKS-K~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 77 IKS-KNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred ecc-CCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 442 33466666543 32 2588888888764
No 359
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=97.51 E-value=0.00091 Score=67.93 Aligned_cols=109 Identities=20% Similarity=0.299 Sum_probs=84.0
Q ss_pred eEEEEECCCCCEEEEEEC----CCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEE
Q 010754 277 VTTLDWNGEGTLLATGSY----DGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQ 352 (502)
Q Consensus 277 v~~l~~s~~g~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~ 352 (502)
-+-.+|+|...++++++. .|.|.||--.|...... ...-.++++||+|..-.|+.|=.-|.+.+|...+.+.-..
T Consensus 18 sti~SWHPsePlfAVA~fS~er~GSVtIfadtGEPqr~V-t~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv 96 (1416)
T KOG3617|consen 18 STISSWHPSEPLFAVASFSPERGGSVTIFADTGEPQRDV-TYPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTV 96 (1416)
T ss_pred ccccccCCCCceeEEEEecCCCCceEEEEecCCCCCccc-ccceehhhhccChHHHHHhhccccceeEEEecCCceeeee
Confidence 345579999999999875 48999996555432211 1122356799999887888888889999999887776666
Q ss_pred EeeccCCeEEEEecCC-CEEEEEeCCCeEEEEEcC
Q 010754 353 FEFHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIG 386 (502)
Q Consensus 353 ~~~~~~~v~~v~~~~~-~~~~~~~~d~~i~i~d~~ 386 (502)
...|..++..+.|+++ +.++++..-|.+.+|...
T Consensus 97 ~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 97 VETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred ccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 7779999999999775 568888888999999876
No 360
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.49 E-value=0.0061 Score=46.83 Aligned_cols=99 Identities=14% Similarity=0.146 Sum_probs=65.8
Q ss_pred eEEEEECC---CC-CEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEE
Q 010754 277 VTTLDWNG---EG-TLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQ 352 (502)
Q Consensus 277 v~~l~~s~---~g-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~ 352 (502)
|++|++.. +| +.|++|+.|..|++|+-+ ..+..+. -.+.|.+|+-... ..|+.+..+|+|-+|+-... +..
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~-e~~~Ei~-e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~R--lWR 76 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD-EIVAEIT-ETDKVTSLCSLGG-GRFAYALANGTVGVYDRSQR--LWR 76 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCC-cEEEEEe-cccceEEEEEcCC-CEEEEEecCCEEEEEeCcce--eee
Confidence 55666544 33 589999999999999754 3333333 3466788876665 67999999999999985333 333
Q ss_pred EeeccCCeEEEEecCCC-----EEEEEeCCCeEE
Q 010754 353 FEFHSGPTLDVDWRNNV-----SFATSSTDNMIY 381 (502)
Q Consensus 353 ~~~~~~~v~~v~~~~~~-----~~~~~~~d~~i~ 381 (502)
.+ .+..+.++.+.+-. .+++|-.+|.|-
T Consensus 77 iK-SK~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 77 IK-SKNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred ec-cCCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 33 23335666553322 588998888874
No 361
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=97.39 E-value=0.16 Score=49.70 Aligned_cols=98 Identities=23% Similarity=0.379 Sum_probs=62.5
Q ss_pred EEEEcCCCCeEEEEeCCCcEEE---EecCCCCccCCCCCCCceeEEEeeecCcccc-CCCCeEEEEEC-----------C
Q 010754 220 ACAWSPAGSLLASGSGDSTARI---WTIADGTSNGGAQNGPLNVLVLKHVKGRTNE-KSKDVTTLDWN-----------G 284 (502)
Q Consensus 220 ~~~~~p~~~~l~sgs~dg~v~i---w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~s-----------~ 284 (502)
.++.+|++.+||.+..+..+.+ |+....... ...+... ..+.... ....|+++.|- +
T Consensus 6 ~isls~~~d~laiA~~~r~vil~~~w~~~~~~~~-------~~~~~~~-~~g~l~~~~~e~ITsi~clpl~s~~~s~~~~ 77 (415)
T PF14655_consen 6 SISLSPDGDLLAIARGQRLVILTSKWDSSRKGEN-------ENTYSIS-WSGPLDDEPGECITSILCLPLSSQKRSTGGP 77 (415)
T ss_pred eEEecCCCCEEEEEcCCEEEEEEeeccccccCCC-------CCeEEEE-eeeeccCCCCCEEEEEEEEEeecccccCCCC
Confidence 5688899999999987766655 543221100 0011111 1111111 11456666653 3
Q ss_pred CCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEec
Q 010754 285 EGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNK 325 (502)
Q Consensus 285 ~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~ 325 (502)
|...+++|..+|.|++|...|.++..-.-|..+|..|+...
T Consensus 78 dw~~I~VG~ssG~vrfyte~G~LL~~Q~~h~~pV~~ik~~~ 118 (415)
T PF14655_consen 78 DWTCIAVGTSSGYVRFYTENGVLLLSQLLHEEPVLKIKCRS 118 (415)
T ss_pred CcEEEEEEecccEEEEEeccchHHHHHhcCccceEEEEecc
Confidence 46789999999999999999888777777899999998853
No 362
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.31 E-value=0.08 Score=49.40 Aligned_cols=146 Identities=13% Similarity=0.058 Sum_probs=93.4
Q ss_pred CCCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEE----------
Q 010754 284 GEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF---------- 353 (502)
Q Consensus 284 ~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~---------- 353 (502)
..++.|+.|+.+| +.+++...........+...|..+...|+-+.|++-+ |+.++++++.........
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~~ 82 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRILKLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSRS 82 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeEeecceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccccccccccc
Confidence 3578899999988 8899883222222222334499999999877776654 599999998765433311
Q ss_pred ----eeccCCeEEEE---ecCCCEEEEEeCCCeEEEEEcCCC-----cceEEEecCCCcEEEEEEcCCCCEEEEEeCCCc
Q 010754 354 ----EFHSGPTLDVD---WRNNVSFATSSTDNMIYVCKIGEN-----RPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVT 421 (502)
Q Consensus 354 ----~~~~~~v~~v~---~~~~~~~~~~~~d~~i~i~d~~~~-----~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~ 421 (502)
......+...+ ...+...++.....+|.+|..... +..+.+. -...+..++|. ++.|+.|..++
T Consensus 83 ~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~--~~~i~v~~~~~- 158 (275)
T PF00780_consen 83 LPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFL--GNKICVGTSKG- 158 (275)
T ss_pred ccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEE-cCCCcEEEEEe--CCEEEEEeCCc-
Confidence 01122333344 223444555666668888887653 3455555 34778899998 56777777654
Q ss_pred EEEEECCCCeeEEE
Q 010754 422 AKIWNMKQDKYVHD 435 (502)
Q Consensus 422 i~iwd~~~~~~~~~ 435 (502)
..+.|+.++.....
T Consensus 159 f~~idl~~~~~~~l 172 (275)
T PF00780_consen 159 FYLIDLNTGSPSEL 172 (275)
T ss_pred eEEEecCCCCceEE
Confidence 88899987765433
No 363
>KOG2079 consensus Vacuolar assembly/sorting protein VPS8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.30 E-value=0.0037 Score=65.48 Aligned_cols=101 Identities=17% Similarity=0.374 Sum_probs=69.9
Q ss_pred CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCC
Q 010754 226 AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG 305 (502)
Q Consensus 226 ~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~ 305 (502)
.+..++.|+..|.+-..|+...-. .+ ........+|++++|+.+|..++.|-.+|.|.+||...
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~nL~---------------~~-~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~ 161 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGNLG---------------PL-HQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHR 161 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcccc---------------hh-hcCCccCCcceeeEecCCCceeccccCCCcEEEEEccC
Confidence 355688888888888877654210 00 01112246899999999999999999999999999875
Q ss_pred -ceEEEecCccCCeEEE---EEecCCCEEEEEecCCeEEEEEc
Q 010754 306 -DLKCTLSKHKGPIFSL---KWNKKGDYLLTGSCDKTAIVWDV 344 (502)
Q Consensus 306 -~~~~~~~~~~~~v~~l---~~~~~~~~l~s~~~d~~i~~wd~ 344 (502)
+....+..|..+..++ .|..++..++++...|. +|.+
T Consensus 162 ~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 162 AKILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKL 202 (1206)
T ss_pred CcceeeeeecCCccceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence 6666666666554444 44455667888887776 5544
No 364
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=97.30 E-value=0.14 Score=50.28 Aligned_cols=177 Identities=14% Similarity=0.128 Sum_probs=120.7
Q ss_pred CeEEEEECCCCCEEEEE-ECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEec---CCeEEEEEcCCCceEE
Q 010754 276 DVTTLDWNGEGTLLATG-SYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSC---DKTAIVWDVKTEEWKQ 351 (502)
Q Consensus 276 ~v~~l~~s~~g~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~---d~~i~~wd~~~~~~~~ 351 (502)
.-..++.++.+..++.. ..++.|.+.|...........-......++++|+++.+.++.. ++++.+.|-.+++...
T Consensus 75 ~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~ 154 (381)
T COG3391 75 YPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTA 154 (381)
T ss_pred cccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEE
Confidence 34577888888855444 4558999999665444433333336688999999988887666 6899999999998888
Q ss_pred EEeeccCCeEEEEecCCCE--EEEEeCCCeEEEEEcCCCcceE-E---EecCCCcEEEEEEcCCCCEEEEEeCC---CcE
Q 010754 352 QFEFHSGPTLDVDWRNNVS--FATSSTDNMIYVCKIGENRPIK-T---FAGHQGEVNCVKWDPTGSLLASCSDD---VTA 422 (502)
Q Consensus 352 ~~~~~~~~v~~v~~~~~~~--~~~~~~d~~i~i~d~~~~~~~~-~---~~~h~~~i~~l~~sp~g~~las~s~d---g~i 422 (502)
.......+ ..+.+.+++. +++-..++.|.+.|........ . ...-......+.++|+|.++...... +.+
T Consensus 155 ~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v 233 (381)
T COG3391 155 TIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNV 233 (381)
T ss_pred EEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceE
Confidence 75544444 7788877655 3444578999999976654442 1 01122334578999999966554443 689
Q ss_pred EEEECCCCeeEEEeccCCC-cEEEEEEccCCC
Q 010754 423 KIWNMKQDKYVHDLREHSK-EIYTIRWSPTGS 453 (502)
Q Consensus 423 ~iwd~~~~~~~~~~~~h~~-~i~~v~~sp~g~ 453 (502)
...|..++.....-..-.. .-..+..+|+|.
T Consensus 234 ~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~ 265 (381)
T COG3391 234 LKIDTATGNVTATDLPVGSGAPRGVAVDPAGK 265 (381)
T ss_pred EEEeCCCceEEEeccccccCCCCceeECCCCC
Confidence 9999998887665221222 456789999998
No 365
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.28 E-value=0.018 Score=58.27 Aligned_cols=132 Identities=14% Similarity=0.128 Sum_probs=83.5
Q ss_pred CCCCCEEEEEECCCeEEEEECCC-----ceEEEecCccCCeEEEEEecCCCEEEEEe-cCCeEEEEEcCCCce-------
Q 010754 283 NGEGTLLATGSYDGQARIWSTNG-----DLKCTLSKHKGPIFSLKWNKKGDYLLTGS-CDKTAIVWDVKTEEW------- 349 (502)
Q Consensus 283 s~~g~~l~s~~~dg~i~iwd~~~-----~~~~~~~~~~~~v~~l~~~~~~~~l~s~~-~d~~i~~wd~~~~~~------- 349 (502)
.++|++...+ ++.|.+.|... .....+..-......+.++|+|+++++++ .+.+|.+.|+.+.+.
T Consensus 285 vkdGK~~~V~--gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~ 362 (635)
T PRK02888 285 VKAGKFKTIG--GSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIK 362 (635)
T ss_pred hhCCCEEEEC--CCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCC
Confidence 4578776653 57899999765 33343334455668999999999888655 489999999987542
Q ss_pred -----EEEEeeccCCeEEEEecCC-CEEEEEeCCCeEEEEEcCC----------CcceEEEecCCCc-----EEEEEEcC
Q 010754 350 -----KQQFEFHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGE----------NRPIKTFAGHQGE-----VNCVKWDP 408 (502)
Q Consensus 350 -----~~~~~~~~~~v~~v~~~~~-~~~~~~~~d~~i~i~d~~~----------~~~~~~~~~h~~~-----i~~l~~sp 408 (502)
........ ......|.++ ..+.+-..|..|..|++.. ...+.++.-|-.+ ..+=.-.|
T Consensus 363 ~~~~vvaevevGl-GPLHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~pgh~~~~~g~t~~~ 441 (635)
T PRK02888 363 PRDAVVAEPELGL-GPLHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQPGHNHASMGETKEA 441 (635)
T ss_pred ccceEEEeeccCC-CcceEEECCCCCEEEeEeecceeEEEehHHHHHHhccccCCcceecccCCCccceeeecCCCcCCC
Confidence 33333322 2345566555 4566778899999999876 2334444333221 11112357
Q ss_pred CCCEEEEEe
Q 010754 409 TGSLLASCS 417 (502)
Q Consensus 409 ~g~~las~s 417 (502)
+|++|++..
T Consensus 442 dgk~l~~~n 450 (635)
T PRK02888 442 DGKWLVSLN 450 (635)
T ss_pred CCCEEEEcc
Confidence 788877764
No 366
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=97.16 E-value=0.16 Score=51.64 Aligned_cols=128 Identities=8% Similarity=0.037 Sum_probs=81.5
Q ss_pred EEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEEE-----------------EeCCCeEEEEEcCCCcce
Q 010754 329 YLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFAT-----------------SSTDNMIYVCKIGENRPI 391 (502)
Q Consensus 329 ~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~-----------------~~~d~~i~i~d~~~~~~~ 391 (502)
.+++++.+|.+...|..+|+.+....... ..+...++..++. ...+|.+.-+|+.+++.+
T Consensus 303 ~V~~g~~~G~l~ald~~tG~~~W~~~~~~---~~~~~~~~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~ 379 (488)
T cd00216 303 AIVHAPKNGFFYVLDRTTGKLISARPEVE---QPMAYDPGLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVV 379 (488)
T ss_pred EEEEECCCceEEEEECCCCcEeeEeEeec---cccccCCceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCcEe
Confidence 57788899999999999999887665321 1122333222221 124678889999999887
Q ss_pred EEEecCC--------CcE--EEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEE--EEEEccCCCCCCCCC
Q 010754 392 KTFAGHQ--------GEV--NCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIY--TIRWSPTGSGTNNPN 459 (502)
Q Consensus 392 ~~~~~h~--------~~i--~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~--~v~~sp~g~~~~~~~ 459 (502)
.+..... .+. ..+.. .+.+|+.++.||.|+.+|..+|+.+.+++. ...+. -+.+..+|.
T Consensus 380 W~~~~~~~~~~~~~g~~~~~~~~~~--~g~~v~~g~~dG~l~ald~~tG~~lW~~~~-~~~~~a~P~~~~~~g~------ 450 (488)
T cd00216 380 WEKREGTIRDSWNIGFPHWGGSLAT--AGNLVFAGAADGYFRAFDATTGKELWKFRT-PSGIQATPMTYEVNGK------ 450 (488)
T ss_pred eEeeCCccccccccCCcccCcceEe--cCCeEEEECCCCeEEEEECCCCceeeEEEC-CCCceEcCEEEEeCCE------
Confidence 7665321 111 11222 467888999999999999999999988763 22222 233444553
Q ss_pred ccEEEEeecCc
Q 010754 460 QQLILARLIPY 470 (502)
Q Consensus 460 ~~l~las~~~~ 470 (502)
+++++.++.
T Consensus 451 --~yv~~~~g~ 459 (488)
T cd00216 451 --QYVGVMVGG 459 (488)
T ss_pred --EEEEEEecC
Confidence 566666554
No 367
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.15 E-value=0.047 Score=53.22 Aligned_cols=142 Identities=10% Similarity=0.047 Sum_probs=94.6
Q ss_pred CCCCEEE-EEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCC-------EEEEEecCCeEEEEEcCCCce--EEE
Q 010754 284 GEGTLLA-TGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGD-------YLLTGSCDKTAIVWDVKTEEW--KQQ 352 (502)
Q Consensus 284 ~~g~~l~-s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~-------~l~s~~~d~~i~~wd~~~~~~--~~~ 352 (502)
.+.++|+ ++..-..++-.|++ |+.+....-+.. |.-+.+.|+.+ .-+.|-.|..|.-||.+-... +..
T Consensus 343 ~dsnlil~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~ 421 (644)
T KOG2395|consen 343 ADSNLILMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAV 421 (644)
T ss_pred cccceEeeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeee
Confidence 3444444 34444566666765 566666666655 67777777543 234567789999999974322 111
Q ss_pred Eee----ccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 010754 353 FEF----HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNM 427 (502)
Q Consensus 353 ~~~----~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~ 427 (502)
... ......|.+-..++.+++|+.+|.|++||--..+.-..+++-..+|..|..+.+|++|+..+. ..+.+-++
T Consensus 422 ~q~kqy~~k~nFsc~aTT~sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~-tyLlLi~t 499 (644)
T KOG2395|consen 422 VQSKQYSTKNNFSCFATTESGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATCK-TYLLLIDT 499 (644)
T ss_pred eeccccccccccceeeecCCceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEecc-cEEEEEEE
Confidence 111 122345666677899999999999999998433444557888899999999999999866554 46666664
No 368
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.12 E-value=0.11 Score=49.66 Aligned_cols=182 Identities=14% Similarity=0.156 Sum_probs=103.2
Q ss_pred CCeEEEEeC----------CCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCC
Q 010754 227 GSLLASGSG----------DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDG 296 (502)
Q Consensus 227 ~~~l~sgs~----------dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg 296 (502)
..+|+.|.. .|.|.++++.+... ....++... .....++|++++-- +| .|++|. ++
T Consensus 42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~---------~~~~l~~i~--~~~~~g~V~ai~~~-~~-~lv~~~-g~ 107 (321)
T PF03178_consen 42 KEYIVVGTAFNYGEDPEPSSGRILVFEISESPE---------NNFKLKLIH--STEVKGPVTAICSF-NG-RLVVAV-GN 107 (321)
T ss_dssp SEEEEEEEEE--TTSSS-S-EEEEEEEECSS--------------EEEEEE--EEEESS-EEEEEEE-TT-EEEEEE-TT
T ss_pred cCEEEEEecccccccccccCcEEEEEEEEcccc---------cceEEEEEE--EEeecCcceEhhhh-CC-EEEEee-cC
Confidence 457777753 28899999987410 000111111 11124678988765 33 455544 48
Q ss_pred eEEEEECCCce-EEEecCccC--CeEEEEEecCCCEEEEEecCCeEEEEEcCC-CceEEEEee--ccCCeEEEEec-CCC
Q 010754 297 QARIWSTNGDL-KCTLSKHKG--PIFSLKWNKKGDYLLTGSCDKTAIVWDVKT-EEWKQQFEF--HSGPTLDVDWR-NNV 369 (502)
Q Consensus 297 ~i~iwd~~~~~-~~~~~~~~~--~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~--~~~~v~~v~~~-~~~ 369 (502)
.|.+|++.... ......+.. .+.++.. .++++++|+....+.++..+. ...+..+.. ....++++.+. .+.
T Consensus 108 ~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~--~~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~ 185 (321)
T PF03178_consen 108 KLYVYDLDNSKTLLKKAFYDSPFYITSLSV--FKNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDED 185 (321)
T ss_dssp EEEEEEEETTSSEEEEEEE-BSSSEEEEEE--ETTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSS
T ss_pred EEEEEEccCcccchhhheecceEEEEEEec--cccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCc
Confidence 99999977554 443333333 4555554 467999999988888875543 222333332 33457888886 445
Q ss_pred EEEEEeCCCeEEEEEcCCC-------c--c--eEEEecCCCcEEEE---EEcC--CCC------EEEEEeCCCcEEEE
Q 010754 370 SFATSSTDNMIYVCKIGEN-------R--P--IKTFAGHQGEVNCV---KWDP--TGS------LLASCSDDVTAKIW 425 (502)
Q Consensus 370 ~~~~~~~d~~i~i~d~~~~-------~--~--~~~~~~h~~~i~~l---~~sp--~g~------~las~s~dg~i~iw 425 (502)
.++++..+|.+.++..... . . +..+. ....|+++ .+.| .+. .++.++.+|.|.+.
T Consensus 186 ~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~-lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l 262 (321)
T PF03178_consen 186 TIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFH-LGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVL 262 (321)
T ss_dssp EEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE--SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred EEEEEcCCCeEEEEEECCCCcccccccccceeEEEEE-CCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence 8999999999999887631 1 1 22222 24567777 5555 222 47778888888733
No 369
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.06 E-value=0.016 Score=56.38 Aligned_cols=140 Identities=14% Similarity=0.206 Sum_probs=99.0
Q ss_pred CCCEEE-EEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCE--------EEEEeCCCeEEEEEcCCCc--ceEEE
Q 010754 326 KGDYLL-TGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS--------FATSSTDNMIYVCKIGENR--PIKTF 394 (502)
Q Consensus 326 ~~~~l~-s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~--------~~~~~~d~~i~i~d~~~~~--~~~~~ 394 (502)
+.+.|+ ++.....++-.|+..|+.+.....+.. |.-+.+.|+.. -++|-.+..|.-||.+-.. .+..-
T Consensus 344 dsnlil~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~ 422 (644)
T KOG2395|consen 344 DSNLILMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVV 422 (644)
T ss_pred ccceEeeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeee
Confidence 344443 555667899999999999999988776 55556655433 3567788899999987432 22222
Q ss_pred ecC----CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCee-EEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecC
Q 010754 395 AGH----QGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY-VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIP 469 (502)
Q Consensus 395 ~~h----~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~-~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~ 469 (502)
.+| .....|.+-..+| +++.||.+|.||+||- .+.. -..+.+-..+|..|..+.+|. .++|+.+.
T Consensus 423 q~kqy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGK--------wil~Tc~t 492 (644)
T KOG2395|consen 423 QSKQYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGK--------WILATCKT 492 (644)
T ss_pred eccccccccccceeeecCCc-eEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCc--------EEEEeccc
Confidence 333 2346666666555 8899999999999996 4433 345567888999999999997 68888887
Q ss_pred ceEEEEe
Q 010754 470 YFLYWIC 476 (502)
Q Consensus 470 ~~~iw~~ 476 (502)
.+.+-..
T Consensus 493 yLlLi~t 499 (644)
T KOG2395|consen 493 YLLLIDT 499 (644)
T ss_pred EEEEEEE
Confidence 7666543
No 370
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.06 E-value=0.028 Score=58.03 Aligned_cols=170 Identities=14% Similarity=0.179 Sum_probs=97.0
Q ss_pred CCeEEEEECCCCCEEEEEE------CCC--eEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecC----------
Q 010754 275 KDVTTLDWNGEGTLLATGS------YDG--QARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD---------- 336 (502)
Q Consensus 275 ~~v~~l~~s~~g~~l~s~~------~dg--~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d---------- 336 (502)
..+...+++|+|+.++... .|+ .|.+++..+.....+.+. ....-.|+|+|..|++.+..
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~lt~g~--~~t~PsWspDG~~lw~v~dg~~~~~v~~~~ 427 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQVLEGH--SLTRPSWSLDADAVWVVVDGNTVVRVIRDP 427 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcceeeecCC--CCCCceECCCCCceEEEecCcceEEEeccC
Confidence 3578999999999887765 243 455555544443333322 37888999998877776532
Q ss_pred --CeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEE---EEcCCCcc-e---EEE-ecCCCcEEEEEE
Q 010754 337 --KTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYV---CKIGENRP-I---KTF-AGHQGEVNCVKW 406 (502)
Q Consensus 337 --~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i---~d~~~~~~-~---~~~-~~h~~~i~~l~~ 406 (502)
+.+.+.++..+.... .....|..+.|++++.-+..-.++.|++ -....+.. + ..+ .+-...+..+.|
T Consensus 428 ~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W 504 (591)
T PRK13616 428 ATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMIIGGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSLDW 504 (591)
T ss_pred CCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEECCEEEEEEEEeCCCCceeecccEEeecccCCccccceE
Confidence 233333444333222 2345799999998876333333578877 44334431 1 112 223344688999
Q ss_pred cCCCCEEEEEeCCCcEEEEECCC-CeeEEEecc--CCCcEEEEEEcc
Q 010754 407 DPTGSLLASCSDDVTAKIWNMKQ-DKYVHDLRE--HSKEIYTIRWSP 450 (502)
Q Consensus 407 sp~g~~las~s~dg~i~iwd~~~-~~~~~~~~~--h~~~i~~v~~sp 450 (502)
..++.++ .+..++...+|.+.- |.....+.. ...++.+|+=++
T Consensus 505 ~~~~~L~-V~~~~~~~~v~~v~vDG~~~~~~~~~n~~~~v~~vaa~~ 550 (591)
T PRK13616 505 RTGDSLV-VGRSDPEHPVWYVNLDGSNSDALPSRNLSAPVVAVAASP 550 (591)
T ss_pred ecCCEEE-EEecCCCCceEEEecCCccccccCCCCccCceEEEecCC
Confidence 9999865 555555455565432 221111122 245677777776
No 371
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.04 E-value=0.23 Score=44.82 Aligned_cols=230 Identities=12% Similarity=0.121 Sum_probs=128.0
Q ss_pred EEEEEcCC-CCeEEEEeCCCc-EEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECC-
Q 010754 219 CACAWSPA-GSLLASGSGDST-ARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD- 295 (502)
Q Consensus 219 ~~~~~~p~-~~~l~sgs~dg~-v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~d- 295 (502)
..++|+|. ..-++.+-.-|+ ..++|........ ........++.+| =.|||||.+|+..-.|
T Consensus 71 Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv---------~~~s~~~RHfyGH------Gvfs~dG~~LYATEndf 135 (366)
T COG3490 71 HGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPV---------TLVSQEGRHFYGH------GVFSPDGRLLYATENDF 135 (366)
T ss_pred CCeecCCCCcceEEEEecCCceEEEECCCCCcCcE---------EEecccCceeecc------cccCCCCcEEEeecCCC
Confidence 35777875 445666655554 5678877655321 1111112233333 2589999999876544
Q ss_pred ----CeEEEEECCCc--eEEEecCccCCeEEEEEecCCCEEEEEecC------------------CeEEEEEcCCCceEE
Q 010754 296 ----GQARIWSTNGD--LKCTLSKHKGPIFSLKWNKKGDYLLTGSCD------------------KTAIVWDVKTEEWKQ 351 (502)
Q Consensus 296 ----g~i~iwd~~~~--~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d------------------~~i~~wd~~~~~~~~ 351 (502)
|.|-|||.+.. .+-.+..|.-.-..+.|.+||+.++.+... -++.+.|..+|..+.
T Consensus 136 d~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~lie 215 (366)
T COG3490 136 DPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIE 215 (366)
T ss_pred CCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhh
Confidence 78999998743 344667777777889999999988876421 134444545555443
Q ss_pred EEee----ccCCeEEEEecCCCEEEEEeC------CCeEEEEEcCCCcceEEEec-------CCCcEEEEEEcCCCCEEE
Q 010754 352 QFEF----HSGPTLDVDWRNNVSFATSST------DNMIYVCKIGENRPIKTFAG-------HQGEVNCVKWDPTGSLLA 414 (502)
Q Consensus 352 ~~~~----~~~~v~~v~~~~~~~~~~~~~------d~~i~i~d~~~~~~~~~~~~-------h~~~i~~l~~sp~g~~la 414 (502)
+... +.-.+..++..+++.+..++. |---.+--...++++.-+.- ....|-+|+.+.+..+++
T Consensus 216 kh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~ 295 (366)
T COG3490 216 KHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVA 295 (366)
T ss_pred hccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecccCCeEE
Confidence 3221 223455566555555555432 11111112223344433321 124577888887666666
Q ss_pred EEeC-CCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEE
Q 010754 415 SCSD-DVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYW 474 (502)
Q Consensus 415 s~s~-dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw 474 (502)
..|- .+...|||..+|..+..-.-. .+..++--.. -+...|.++.+.++
T Consensus 296 lTSP~GN~~vi~da~tG~vv~~a~l~--daaGva~~~~---------gf~vssg~G~~~~~ 345 (366)
T COG3490 296 LTSPRGNRAVIWDAATGAVVSEAALP--DAAGVAAAKG---------GFAVSSGQGRIIFY 345 (366)
T ss_pred EecCCCCeEEEEEcCCCcEEeccccc--ccccceeccC---------ceEEecCCceEEec
Confidence 5555 456789999999876543211 1222222222 34666666666554
No 372
>KOG2079 consensus Vacuolar assembly/sorting protein VPS8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.01 E-value=0.003 Score=66.16 Aligned_cols=96 Identities=24% Similarity=0.394 Sum_probs=74.7
Q ss_pred CCCEEEEEECCCeEEEEECCCceE--EEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEE
Q 010754 285 EGTLLATGSYDGQARIWSTNGDLK--CTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLD 362 (502)
Q Consensus 285 ~g~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~ 362 (502)
.+..++.|+..|.|-..|..+... ..-....++|++++|+.+|..++.|-.+|.|.+||+..++..+.+..+..+...
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~ 177 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTG 177 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccce
Confidence 345788899899999999887644 222334689999999999999999999999999999999999998888777655
Q ss_pred EEe---cC-CCEEEEEeCCCeE
Q 010754 363 VDW---RN-NVSFATSSTDNMI 380 (502)
Q Consensus 363 v~~---~~-~~~~~~~~~d~~i 380 (502)
+-+ .. +..++++...|.+
T Consensus 178 vi~v~~t~~nS~llt~D~~Gsf 199 (1206)
T KOG2079|consen 178 VIFVGRTSQNSKLLTSDTGGSF 199 (1206)
T ss_pred EEEEEEeCCCcEEEEccCCCce
Confidence 543 33 4446777666653
No 373
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=96.98 E-value=0.27 Score=44.58 Aligned_cols=181 Identities=13% Similarity=0.076 Sum_probs=110.4
Q ss_pred ceEEEEEcCCCCeEEEEeCCC--cEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEEC
Q 010754 217 EVCACAWSPAGSLLASGSGDS--TARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY 294 (502)
Q Consensus 217 ~V~~~~~~p~~~~l~sgs~dg--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~ 294 (502)
-...+.|..+|.++-+.+.-| .|+.+|+.+++.... ..+.... ---.++.. ++++....-.
T Consensus 46 FTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~-----------~~l~~~~-----FgEGit~~-~d~l~qLTWk 108 (264)
T PF05096_consen 46 FTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQS-----------VPLPPRY-----FGEGITIL-GDKLYQLTWK 108 (264)
T ss_dssp EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEE-----------EE-TTT-------EEEEEEE-TTEEEEEESS
T ss_pred cCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEE-----------EECCccc-----cceeEEEE-CCEEEEEEec
Confidence 356788877888888887655 799999998764221 1111111 11122222 2233444446
Q ss_pred CCeEEEEECCCc-eEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccC-----CeEEEEecCC
Q 010754 295 DGQARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSG-----PTLDVDWRNN 368 (502)
Q Consensus 295 dg~i~iwd~~~~-~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~-----~v~~v~~~~~ 368 (502)
++...+||.+.- .+..+ ...+.=+.|+ .+++.|+.+.....+.++|..+.+..+.+..... .+..+.|..+
T Consensus 109 ~~~~f~yd~~tl~~~~~~-~y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i~G 185 (264)
T PF05096_consen 109 EGTGFVYDPNTLKKIGTF-PYPGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYING 185 (264)
T ss_dssp SSEEEEEETTTTEEEEEE-E-SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEETT
T ss_pred CCeEEEEccccceEEEEE-ecCCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEEcC
Confidence 789999998753 33333 3345567887 4577788777788999999988887777654322 4666788877
Q ss_pred CEEEEEeCCCeEEEEEcCCCcceEEEec------------C---CCcEEEEEEcCCCCEEEEEe
Q 010754 369 VSFATSSTDNMIYVCKIGENRPIKTFAG------------H---QGEVNCVKWDPTGSLLASCS 417 (502)
Q Consensus 369 ~~~~~~~~d~~i~i~d~~~~~~~~~~~~------------h---~~~i~~l~~sp~g~~las~s 417 (502)
..++=.-....|...|..+|+.+..+.- + .+-.+.|+|+|....|...+
T Consensus 186 ~IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG 249 (264)
T PF05096_consen 186 KIYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG 249 (264)
T ss_dssp EEEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred EEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence 6677667788888999999988776631 1 24588999998766554443
No 374
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=96.94 E-value=0.13 Score=44.99 Aligned_cols=144 Identities=13% Similarity=0.213 Sum_probs=90.7
Q ss_pred CCeEEEEECCCCCEEEEEECC---------CeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEE-EecCCeEEEEE-
Q 010754 275 KDVTTLDWNGEGTLLATGSYD---------GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLT-GSCDKTAIVWD- 343 (502)
Q Consensus 275 ~~v~~l~~s~~g~~l~s~~~d---------g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s-~~~d~~i~~wd- 343 (502)
.....-..+|+|++++-.-.| |.++.|-...+...... .-.--..++|+.+.+.+.. -+.+-+|.-||
T Consensus 109 nR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~h~v~~i~~-~v~IsNgl~Wd~d~K~fY~iDsln~~V~a~dy 187 (310)
T KOG4499|consen 109 NRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAGHQVELIWN-CVGISNGLAWDSDAKKFYYIDSLNYEVDAYDY 187 (310)
T ss_pred cccccCccCCCCceeeeeeccccccccccccEEEEeccCCCceeeeh-hccCCccccccccCcEEEEEccCceEEeeeec
Confidence 345566678999984432222 45555544433322222 2223356788877665554 34455676666
Q ss_pred -cCCCceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcE
Q 010754 344 -VKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTA 422 (502)
Q Consensus 344 -~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i 422 (502)
..+|... +.=.++|++..++...... -.++...+|++.+++-..|+|
T Consensus 188 d~~tG~~s---------------------------nr~~i~dlrk~~~~e~~~P-----DGm~ID~eG~L~Va~~ng~~V 235 (310)
T KOG4499|consen 188 DCPTGDLS---------------------------NRKVIFDLRKSQPFESLEP-----DGMTIDTEGNLYVATFNGGTV 235 (310)
T ss_pred CCCccccc---------------------------CcceeEEeccCCCcCCCCC-----CcceEccCCcEEEEEecCcEE
Confidence 4444321 2224677777655433321 234456689999898889999
Q ss_pred EEEECCCCeeEEEeccCCCcEEEEEEccC
Q 010754 423 KIWNMKQDKYVHDLREHSKEIYTIRWSPT 451 (502)
Q Consensus 423 ~iwd~~~~~~~~~~~~h~~~i~~v~~sp~ 451 (502)
...|..+|+.+.+++-.+..|++++|---
T Consensus 236 ~~~dp~tGK~L~eiklPt~qitsccFgGk 264 (310)
T KOG4499|consen 236 QKVDPTTGKILLEIKLPTPQITSCCFGGK 264 (310)
T ss_pred EEECCCCCcEEEEEEcCCCceEEEEecCC
Confidence 99999999999999988889999999644
No 375
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=96.92 E-value=0.35 Score=45.53 Aligned_cols=142 Identities=8% Similarity=-0.011 Sum_probs=88.1
Q ss_pred CCeEEEEECCCCCEEEEEEC-----------CCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecC-CeEEEE
Q 010754 275 KDVTTLDWNGEGTLLATGSY-----------DGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD-KTAIVW 342 (502)
Q Consensus 275 ~~v~~l~~s~~g~~l~s~~~-----------dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d-~~i~~w 342 (502)
...+.+...|+|.+.++... -|.|+.++..+.....+..+-..-+.|+|||+++.|+.+... +.|.-|
T Consensus 111 ~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~ 190 (307)
T COG3386 111 NRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRY 190 (307)
T ss_pred CCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEE
Confidence 34567778888887766544 144555555556666666656666899999999888887664 778888
Q ss_pred EcCC--Cce-----EEEEeeccCCeEEEEecCCCEEE-EEeCCC-eEEEEEcCCCcceEEEecCCCcEEEEEEcC-CCCE
Q 010754 343 DVKT--EEW-----KQQFEFHSGPTLDVDWRNNVSFA-TSSTDN-MIYVCKIGENRPIKTFAGHQGEVNCVKWDP-TGSL 412 (502)
Q Consensus 343 d~~~--~~~-----~~~~~~~~~~v~~v~~~~~~~~~-~~~~d~-~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp-~g~~ 412 (502)
++.. +.. ...+....+..-.++...++.+. ++..+| .|.+|+.. ++.+..+.-....+++++|-- +.+.
T Consensus 191 ~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~~~~t~~~FgG~~~~~ 269 (307)
T COG3386 191 DLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPVKRPTNPAFGGPDLNT 269 (307)
T ss_pred ecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECCCCCCccceEeCCCcCE
Confidence 7752 111 11111122333344443444444 444443 89999988 888888887767788888853 3444
Q ss_pred EEEEe
Q 010754 413 LASCS 417 (502)
Q Consensus 413 las~s 417 (502)
|...+
T Consensus 270 L~iTs 274 (307)
T COG3386 270 LYITS 274 (307)
T ss_pred EEEEe
Confidence 44433
No 376
>KOG2444 consensus WD40 repeat protein [General function prediction only]
Probab=96.88 E-value=0.0033 Score=54.49 Aligned_cols=103 Identities=17% Similarity=0.151 Sum_probs=70.6
Q ss_pred CCEEEEEecCCeEEEEEcCCCc-eEEEEeeccCCeEEEEecC--CCEEEEEeCCCeEEEEEcCCCcceEEEecCC-CcEE
Q 010754 327 GDYLLTGSCDKTAIVWDVKTEE-WKQQFEFHSGPTLDVDWRN--NVSFATSSTDNMIYVCKIGENRPIKTFAGHQ-GEVN 402 (502)
Q Consensus 327 ~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~v~~v~~~~--~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~-~~i~ 402 (502)
+..+++|+.+|.|.+|...... ....+.....++.++.... +....+++.+|.|+.|++..++.+.....|+ .++.
T Consensus 70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e 149 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGE 149 (238)
T ss_pred CceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCcc
Confidence 4679999999999999876211 1111112222333333322 2367888999999999999998888887787 5666
Q ss_pred EEEEcCCCCEEEEE--eCCCcEEEEECCC
Q 010754 403 CVKWDPTGSLLASC--SDDVTAKIWNMKQ 429 (502)
Q Consensus 403 ~l~~sp~g~~las~--s~dg~i~iwd~~~ 429 (502)
....+..+++|+++ |.|..++.|++..
T Consensus 150 ~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 150 ELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred eeEEecCCceEEeeccccchhhhhcchhh
Confidence 66666677777777 7777888888754
No 377
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=96.80 E-value=0.3 Score=45.99 Aligned_cols=207 Identities=12% Similarity=0.069 Sum_probs=121.2
Q ss_pred EEEcCCCC-eEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEE
Q 010754 221 CAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQAR 299 (502)
Q Consensus 221 ~~~~p~~~-~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~ 299 (502)
-.|.++.. ++.+--..+.|.-|+..++... .+. ....+.++..-..+..|+++.. -+.
T Consensus 30 P~w~~~~~~L~w~DI~~~~i~r~~~~~g~~~-----------~~~--------~p~~~~~~~~~d~~g~Lv~~~~--g~~ 88 (307)
T COG3386 30 PVWDPDRGALLWVDILGGRIHRLDPETGKKR-----------VFP--------SPGGFSSGALIDAGGRLIACEH--GVR 88 (307)
T ss_pred ccCcCCCCEEEEEeCCCCeEEEecCCcCceE-----------EEE--------CCCCcccceeecCCCeEEEEcc--ccE
Confidence 35777655 5555556677888887655321 110 1122344444444445555443 345
Q ss_pred EEECC-CceEEEecC-----ccCCeEEEEEecCCCEEEEEec-----------CCeEEEEEcCCCceEEEEeeccCCeEE
Q 010754 300 IWSTN-GDLKCTLSK-----HKGPIFSLKWNKKGDYLLTGSC-----------DKTAIVWDVKTEEWKQQFEFHSGPTLD 362 (502)
Q Consensus 300 iwd~~-~~~~~~~~~-----~~~~v~~l~~~~~~~~l~s~~~-----------d~~i~~wd~~~~~~~~~~~~~~~~v~~ 362 (502)
+++.+ +..+..+.. .....+.+...|+|.+.++... -|.|+.+|. .+..++.+..+-...+.
T Consensus 89 ~~~~~~~~~~t~~~~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~NG 167 (307)
T COG3386 89 LLDPDTGGKITLLAEPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIPNG 167 (307)
T ss_pred EEeccCCceeEEeccccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEecCc
Confidence 55544 222122211 1134567788899887665433 133444443 56666666555666788
Q ss_pred EEecCCC-EEEEE-eCCCeEEEEEcCC--C----cc-eEEEecCCCcEEEEEEcCCCCEEEEEeCCC-cEEEEECCCCee
Q 010754 363 VDWRNNV-SFATS-STDNMIYVCKIGE--N----RP-IKTFAGHQGEVNCVKWDPTGSLLASCSDDV-TAKIWNMKQDKY 432 (502)
Q Consensus 363 v~~~~~~-~~~~~-~~d~~i~i~d~~~--~----~~-~~~~~~h~~~i~~l~~sp~g~~las~s~dg-~i~iwd~~~~~~ 432 (502)
++|+|++ .++.+ +..+.|+-|++.. + +. ...+....+..-.++...+|.+.+++-.+| .|.+|+.. +++
T Consensus 168 la~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l 246 (307)
T COG3386 168 LAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKL 246 (307)
T ss_pred eEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcE
Confidence 9999987 44444 4558888887752 1 11 112222345666788888998886555554 89999988 999
Q ss_pred EEEeccCCCcEEEEEEcc
Q 010754 433 VHDLREHSKEIYTIRWSP 450 (502)
Q Consensus 433 ~~~~~~h~~~i~~v~~sp 450 (502)
+..+......+++++|--
T Consensus 247 ~~~i~lP~~~~t~~~FgG 264 (307)
T COG3386 247 LGEIKLPVKRPTNPAFGG 264 (307)
T ss_pred EEEEECCCCCCccceEeC
Confidence 988886667788888854
No 378
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=96.74 E-value=0.42 Score=48.70 Aligned_cols=196 Identities=10% Similarity=0.060 Sum_probs=112.3
Q ss_pred CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeE--EEEECCCCCEEEEEECCCeEEEEECC
Q 010754 227 GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVT--TLDWNGEGTLLATGSYDGQARIWSTN 304 (502)
Q Consensus 227 ~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~l~~s~~g~~l~s~~~dg~i~iwd~~ 304 (502)
+..++.++.++.+.-.|..+++..-........ ......+. .+... ++..++.++.+|.|.-+|.+
T Consensus 61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~-----------~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~ 128 (488)
T cd00216 61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPA-----------DRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAE 128 (488)
T ss_pred CCEEEEeCCCCcEEEEECCCChhhceeCCCCCc-----------cccccccccCCcEEc-cCCeEEEecCCCeEEEEECC
Confidence 445667777899999999888754332211100 00000000 11111 22577888889999999976
Q ss_pred -CceEEEecCccCC-----e-EEEEEecCCCEEEEEe---------cCCeEEEEEcCCCceEEEEeeccCCe--------
Q 010754 305 -GDLKCTLSKHKGP-----I-FSLKWNKKGDYLLTGS---------CDKTAIVWDVKTEEWKQQFEFHSGPT-------- 360 (502)
Q Consensus 305 -~~~~~~~~~~~~~-----v-~~l~~~~~~~~l~s~~---------~d~~i~~wd~~~~~~~~~~~~~~~~v-------- 360 (502)
++.+..+...... + .+..+. +..++.++ .++.+..+|..+|+.+..+.......
T Consensus 129 TG~~~W~~~~~~~~~~~~~i~ssP~v~--~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~ 206 (488)
T cd00216 129 TGKQVWKFGNNDQVPPGYTMTGAPTIV--KKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGP 206 (488)
T ss_pred CCCEeeeecCCCCcCcceEecCCCEEE--CCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCC
Confidence 5555554432210 1 111122 24455543 36889999999999888776532110
Q ss_pred -------------EEEEec-CCCEEEEEeCCC------------------eEEEEEcCCCcceEEEecCCCcE------E
Q 010754 361 -------------LDVDWR-NNVSFATSSTDN------------------MIYVCKIGENRPIKTFAGHQGEV------N 402 (502)
Q Consensus 361 -------------~~v~~~-~~~~~~~~~~d~------------------~i~i~d~~~~~~~~~~~~h~~~i------~ 402 (502)
...... ..+.++.++.++ .|.-+|..+++.+..+..-.... .
T Consensus 207 ~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s 286 (488)
T cd00216 207 DRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPN 286 (488)
T ss_pred CcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCC
Confidence 011111 245667776554 79999999999887764211111 0
Q ss_pred EEEEc----CCCC---EEEEEeCCCcEEEEECCCCeeEEEe
Q 010754 403 CVKWD----PTGS---LLASCSDDVTAKIWNMKQDKYVHDL 436 (502)
Q Consensus 403 ~l~~s----p~g~---~las~s~dg~i~iwd~~~~~~~~~~ 436 (502)
...+. -+|. +++.++.+|.+...|..+|+.+...
T Consensus 287 ~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~ 327 (488)
T cd00216 287 QPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISAR 327 (488)
T ss_pred CCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEe
Confidence 01111 1343 6788889999999999999987654
No 379
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=96.73 E-value=0.44 Score=45.70 Aligned_cols=173 Identities=17% Similarity=0.246 Sum_probs=89.6
Q ss_pred EEECCCCCEEEEEE-CCC--eEEEEECCCceEEEecCccC-CeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEee
Q 010754 280 LDWNGEGTLLATGS-YDG--QARIWSTNGDLKCTLSKHKG-PIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF 355 (502)
Q Consensus 280 l~~s~~g~~l~s~~-~dg--~i~iwd~~~~~~~~~~~~~~-~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 355 (502)
=+|.++|+.|+.++ .+| .+.+.|+.+..+..+....+ ......++|+++.++-......|+-.|+.+.+....+..
T Consensus 41 ~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~ 120 (386)
T PF14583_consen 41 NCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEV 120 (386)
T ss_dssp --B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE-
T ss_pred CCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEEC
Confidence 35788997666555 455 56666788877777766542 234567789888887666677999999999887666666
Q ss_pred ccCCeEEEEec--CCCEEEEEe-----------------------CCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCC
Q 010754 356 HSGPTLDVDWR--NNVSFATSS-----------------------TDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG 410 (502)
Q Consensus 356 ~~~~v~~v~~~--~~~~~~~~~-----------------------~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g 410 (502)
....+-...|. .+...+++. ....|.-.|+.+++.-..+. -...+..+.|+|..
T Consensus 121 p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~-~~~wlgH~~fsP~d 199 (386)
T PF14583_consen 121 PDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFE-DTDWLGHVQFSPTD 199 (386)
T ss_dssp -TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEE-ESS-EEEEEEETTE
T ss_pred CcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEe-cCccccCcccCCCC
Confidence 55555445552 233333321 12346666777776544444 55678899999975
Q ss_pred CEE-EEEeC---CCc-EEEEECCC-CeeEEEeccCC--CcEEEEEEccCCC
Q 010754 411 SLL-ASCSD---DVT-AKIWNMKQ-DKYVHDLREHS--KEIYTIRWSPTGS 453 (502)
Q Consensus 411 ~~l-as~s~---dg~-i~iwd~~~-~~~~~~~~~h~--~~i~~v~~sp~g~ 453 (502)
.-+ +-|-+ +.. -|||-+++ +.-...+..+. ..+..=-|.|||.
T Consensus 200 p~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~ 250 (386)
T PF14583_consen 200 PTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGS 250 (386)
T ss_dssp EEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS
T ss_pred CCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCC
Confidence 544 44443 222 37786643 23333333332 2345556888887
No 380
>PHA02713 hypothetical protein; Provisional
Probab=96.71 E-value=0.04 Score=56.89 Aligned_cols=153 Identities=14% Similarity=0.189 Sum_probs=86.0
Q ss_pred CCCEEEEEECCC-----eEEEEECCCceEEEecCccCCeE--EEEEecCCCEEEEEecC---------------------
Q 010754 285 EGTLLATGSYDG-----QARIWSTNGDLKCTLSKHKGPIF--SLKWNKKGDYLLTGSCD--------------------- 336 (502)
Q Consensus 285 ~g~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~v~--~l~~~~~~~~l~s~~~d--------------------- 336 (502)
+|++.+.||.++ .+..||..............+.. +++ .-+|...+.|+.+
T Consensus 351 ~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~-~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~ 429 (557)
T PHA02713 351 DDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMC-VLDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTH 429 (557)
T ss_pred CCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEE-EECCEEEEEeCCCccccccccccccccccccccc
Confidence 577778888764 47889977655444333222211 111 1256666667654
Q ss_pred --CeEEEEEcCCCceEEEEeeccC-CeEEEEecCCCEEEEEeCC------CeEEEEEcCC-Cc--ceEEEecCCCcEEEE
Q 010754 337 --KTAIVWDVKTEEWKQQFEFHSG-PTLDVDWRNNVSFATSSTD------NMIYVCKIGE-NR--PIKTFAGHQGEVNCV 404 (502)
Q Consensus 337 --~~i~~wd~~~~~~~~~~~~~~~-~v~~v~~~~~~~~~~~~~d------~~i~i~d~~~-~~--~~~~~~~h~~~i~~l 404 (502)
..+..||..+.++...-..... .-.+++...+..++.|+.+ ..+..||..+ ++ .+..+.........+
T Consensus 430 ~~~~ve~YDP~td~W~~v~~m~~~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~ 509 (557)
T PHA02713 430 SSNKVIRYDTVNNIWETLPNFWTGTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTI 509 (557)
T ss_pred ccceEEEECCCCCeEeecCCCCcccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeE
Confidence 2477888887766432221111 1122334456667777654 2467888876 43 333343333333333
Q ss_pred EEcCCCCEEEEEeCCC--cEEEEECCCCeeEEEeccCC
Q 010754 405 KWDPTGSLLASCSDDV--TAKIWNMKQDKYVHDLREHS 440 (502)
Q Consensus 405 ~~sp~g~~las~s~dg--~i~iwd~~~~~~~~~~~~h~ 440 (502)
.+ +|++.+.|+.|| ++..||..+.+....-..|+
T Consensus 510 ~~--~~~iyv~Gg~~~~~~~e~yd~~~~~W~~~~~~~~ 545 (557)
T PHA02713 510 LH--DNTIMMLHCYESYMLQDTFNVYTYEWNHICHQHS 545 (557)
T ss_pred EE--CCEEEEEeeecceeehhhcCcccccccchhhhcC
Confidence 33 688889999888 78888888776554433443
No 381
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=96.69 E-value=0.0065 Score=38.98 Aligned_cols=34 Identities=24% Similarity=0.428 Sum_probs=30.1
Q ss_pred CCCeEEEEECCCCCEEEEEECCCeEEEEECCCce
Q 010754 274 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDL 307 (502)
Q Consensus 274 ~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~ 307 (502)
...|.+++|+|...+||.|+.+|.|.+|.+++..
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~~qr 44 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRLNWQR 44 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCcC
Confidence 3469999999999999999999999999986554
No 382
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=96.61 E-value=0.76 Score=44.60 Aligned_cols=194 Identities=10% Similarity=0.120 Sum_probs=92.8
Q ss_pred CCeEEEEe-CCCcEEEEecCCCCccCCCCCCCceeEEEeeecC---ccccCCCCeEEEEECCCCCEEEEEECC------C
Q 010754 227 GSLLASGS-GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKG---RTNEKSKDVTTLDWNGEGTLLATGSYD------G 296 (502)
Q Consensus 227 ~~~l~sgs-~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~l~~s~~g~~l~s~~~d------g 296 (502)
.++|+..+ ..+.|.|.|+.+..... ...+.+.. .....-..-..+.--|+|++++++-.| |
T Consensus 87 Rr~Li~PgL~SsrIyviD~~~dPr~P---------~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~G 157 (461)
T PF05694_consen 87 RRYLILPGLRSSRIYVIDTKTDPRKP---------RLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPG 157 (461)
T ss_dssp S-EEEEEBTTT--EEEEE--S-TTS----------EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--
T ss_pred CCcEEeeeeccCcEEEEECCCCCCCC---------ceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCC
Confidence 45666666 67889999988643211 11111111 000000111222233788888876432 5
Q ss_pred eEEEEECCCc-eEEEecCc---cCCeEEEEEecCCCEEEEEec--------------------CCeEEEEEcCCCceEEE
Q 010754 297 QARIWSTNGD-LKCTLSKH---KGPIFSLKWNKKGDYLLTGSC--------------------DKTAIVWDVKTEEWKQQ 352 (502)
Q Consensus 297 ~i~iwd~~~~-~~~~~~~~---~~~v~~l~~~~~~~~l~s~~~--------------------d~~i~~wd~~~~~~~~~ 352 (502)
-+.++|-++- ........ ..--+.+-|.|..+.++|... ..++.+||+.+.+.+++
T Consensus 158 gf~llD~~tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~ 237 (461)
T PF05694_consen 158 GFVLLDGETFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQT 237 (461)
T ss_dssp EEEEE-TTT--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEE
T ss_pred cEEEEcCccccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeE
Confidence 6777776643 22233221 233567788898898888653 35899999999999999
Q ss_pred EeeccC--CeEEEEec--CCC--EEEEEeCCCeEEEEEc-CCCc----ceEEEecC-----------------CCcEEEE
Q 010754 353 FEFHSG--PTLDVDWR--NNV--SFATSSTDNMIYVCKI-GENR----PIKTFAGH-----------------QGEVNCV 404 (502)
Q Consensus 353 ~~~~~~--~v~~v~~~--~~~--~~~~~~~d~~i~i~d~-~~~~----~~~~~~~h-----------------~~~i~~l 404 (502)
+..... ....|.|. |.. -|+.+.-...|..|-- ..+. .+..+... ..-|+.|
T Consensus 238 idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI 317 (461)
T PF05694_consen 238 IDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDI 317 (461)
T ss_dssp EES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------E
T ss_pred EecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeE
Confidence 987543 35567773 222 2666666666655544 3332 12222110 2447899
Q ss_pred EEcCCCCEEEEEe-CCCcEEEEECCC
Q 010754 405 KWDPTGSLLASCS-DDVTAKIWNMKQ 429 (502)
Q Consensus 405 ~~sp~g~~las~s-~dg~i~iwd~~~ 429 (502)
.+|.|.++|..++ .+|.|+.||+..
T Consensus 318 ~iSlDDrfLYvs~W~~GdvrqYDISD 343 (461)
T PF05694_consen 318 LISLDDRFLYVSNWLHGDVRQYDISD 343 (461)
T ss_dssp EE-TTS-EEEEEETTTTEEEEEE-SS
T ss_pred EEccCCCEEEEEcccCCcEEEEecCC
Confidence 9999999987666 489999999865
No 383
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=96.60 E-value=0.62 Score=43.38 Aligned_cols=207 Identities=13% Similarity=0.127 Sum_probs=113.5
Q ss_pred ceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEE---ECCCCCEEEEEE
Q 010754 217 EVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLD---WNGEGTLLATGS 293 (502)
Q Consensus 217 ~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~---~s~~g~~l~s~~ 293 (502)
.|..+...|+-+.|++-+ |+.+.++++..-........... ...............+...+ -...+..|+++.
T Consensus 37 ~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~ 112 (275)
T PF00780_consen 37 SITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAF---PKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAV 112 (275)
T ss_pred eEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccccc---cccccccccccccCCeeEEeeccccccceEEEEEE
Confidence 389999999877666664 49999999986543221100000 00000000111223444444 222334555544
Q ss_pred CCCeEEEEECCC------ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeecc----------
Q 010754 294 YDGQARIWSTNG------DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS---------- 357 (502)
Q Consensus 294 ~dg~i~iwd~~~------~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~---------- 357 (502)
...|.+|.... .....+ .....+.+++|. ++.++.|.. +...+.|+.++.....+....
T Consensus 113 -kk~i~i~~~~~~~~~f~~~~ke~-~lp~~~~~i~~~--~~~i~v~~~-~~f~~idl~~~~~~~l~~~~~~~~~~~~~~~ 187 (275)
T PF00780_consen 113 -KKKILIYEWNDPRNSFSKLLKEI-SLPDPPSSIAFL--GNKICVGTS-KGFYLIDLNTGSPSELLDPSDSSSSFKSRNS 187 (275)
T ss_pred -CCEEEEEEEECCcccccceeEEE-EcCCCcEEEEEe--CCEEEEEeC-CceEEEecCCCCceEEeCccCCcchhhhccc
Confidence 45888887543 122332 345778999998 566777664 458888998776654442211
Q ss_pred --CCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceE--EEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeE
Q 010754 358 --GPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIK--TFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYV 433 (502)
Q Consensus 358 --~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~--~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~ 433 (502)
.++..+.... +.++.+.. ..-.+.+. .|.+.+ .+.- ...+..+++. ..||+..+.+ .|.||++.+++++
T Consensus 188 ~~~~~~~~~~~~-~e~Ll~~~-~~g~fv~~-~G~~~r~~~i~W-~~~p~~~~~~--~pyli~~~~~-~iEV~~~~~~~lv 260 (275)
T PF00780_consen 188 SSKPLGIFQLSD-NEFLLCYD-NIGVFVNK-NGEPSRKSTIQW-SSAPQSVAYS--SPYLIAFSSN-SIEVRSLETGELV 260 (275)
T ss_pred CCCceEEEEeCC-ceEEEEec-ceEEEEcC-CCCcCcccEEEc-CCchhEEEEE--CCEEEEECCC-EEEEEECcCCcEE
Confidence 1233333333 44555443 33333343 333332 3332 2355566664 4577776665 4999999999999
Q ss_pred EEeccC
Q 010754 434 HDLREH 439 (502)
Q Consensus 434 ~~~~~h 439 (502)
+.+...
T Consensus 261 Q~i~~~ 266 (275)
T PF00780_consen 261 QTIPLP 266 (275)
T ss_pred EEEECC
Confidence 888744
No 384
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=96.60 E-value=0.73 Score=44.23 Aligned_cols=222 Identities=11% Similarity=0.145 Sum_probs=109.3
Q ss_pred eEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC---CCEEEEEEC
Q 010754 218 VCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE---GTLLATGSY 294 (502)
Q Consensus 218 V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~---g~~l~s~~~ 294 (502)
-+.|+|.|+|++|++ ...|.|++++ .++... ..+................++++|+ ..+|.+...
T Consensus 4 P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~----------~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t 71 (331)
T PF07995_consen 4 PRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLK----------TPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYT 71 (331)
T ss_dssp EEEEEEETTSCEEEE-ETTTEEEEEE-TTTEEC----------EEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEE
T ss_pred ceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCc----------ceecccccccccccCCcccceeccccCCCCEEEEEEE
Confidence 468999999987776 5589999999 333210 0111111222334557899999994 233333332
Q ss_pred -C------C--eEEEEECCCc---------eEEEecC---ccCCeEEEEEecCCCEEEEEecCC-------------eEE
Q 010754 295 -D------G--QARIWSTNGD---------LKCTLSK---HKGPIFSLKWNKKGDYLLTGSCDK-------------TAI 340 (502)
Q Consensus 295 -d------g--~i~iwd~~~~---------~~~~~~~---~~~~v~~l~~~~~~~~l~s~~~d~-------------~i~ 340 (502)
. . .|.-|..... .+..... ....-..|.|.|+|.+.++.+..+ .|.
T Consensus 72 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~~~~~~~~~~~~G~il 151 (331)
T PF07995_consen 72 NADEDGGDNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGNDDNAQDPNSLRGKIL 151 (331)
T ss_dssp EE-TSSSSEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTTGGGGCSTTSSTTEEE
T ss_pred cccCCCCCcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCCcccccccccccceEE
Confidence 1 1 3333333211 1111122 234456799999997666654432 233
Q ss_pred EEEcCCCce-------------EEEEeeccCCeEEEEecCC-CEEEEEe--CCCeEEEEEcCCC----------------
Q 010754 341 VWDVKTEEW-------------KQQFEFHSGPTLDVDWRNN-VSFATSS--TDNMIYVCKIGEN---------------- 388 (502)
Q Consensus 341 ~wd~~~~~~-------------~~~~~~~~~~v~~v~~~~~-~~~~~~~--~d~~i~i~d~~~~---------------- 388 (502)
-.+.. ++. ...+..--.....++|.+. +.+.++- .++.=.|..+..+
T Consensus 152 ri~~d-G~~p~dnP~~~~~~~~~~i~A~GlRN~~~~~~d~~tg~l~~~d~G~~~~dein~i~~G~nYGWP~~~~~~~~~~ 230 (331)
T PF07995_consen 152 RIDPD-GSIPADNPFVGDDGADSEIYAYGLRNPFGLAFDPNTGRLWAADNGPDGWDEINRIEPGGNYGWPYCEGGPKYSG 230 (331)
T ss_dssp EEETT-SSB-TTSTTTTSTTSTTTEEEE--SEEEEEEEETTTTEEEEEEE-SSSSEEEEEE-TT-B--TTTBSSSCSTTS
T ss_pred Eeccc-CcCCCCCccccCCCceEEEEEeCCCccccEEEECCCCcEEEEccCCCCCcEEEEeccCCcCCCCCCcCCCCCCC
Confidence 33321 110 0111111122457788776 6655542 2222222222111
Q ss_pred -------------cceEEEecCCCcEEEEEEcC-------CCCEEEEEeCCCcEEEEECCCCeeEE---E-eccCCCcEE
Q 010754 389 -------------RPIKTFAGHQGEVNCVKWDP-------TGSLLASCSDDVTAKIWNMKQDKYVH---D-LREHSKEIY 444 (502)
Q Consensus 389 -------------~~~~~~~~h~~~i~~l~~sp-------~g~~las~s~dg~i~iwd~~~~~~~~---~-~~~h~~~i~ 444 (502)
.++..+..| ..++.+.|.. .|.+|++.-..+.|....+..+..+. . +......+.
T Consensus 231 ~~~~~~~~~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~ 309 (331)
T PF07995_consen 231 PPIGDAPSCPGFVPPVFAYPPH-SAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPR 309 (331)
T ss_dssp S-ECTGSS-TTS---SEEETTT---EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EE
T ss_pred CccccccCCCCcCccceeecCc-cccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCce
Confidence 133444433 5677777764 45567666666778777776553322 2 223455799
Q ss_pred EEEEccCCC
Q 010754 445 TIRWSPTGS 453 (502)
Q Consensus 445 ~v~~sp~g~ 453 (502)
.|++.|||.
T Consensus 310 ~v~~~pDG~ 318 (331)
T PF07995_consen 310 DVAQGPDGA 318 (331)
T ss_dssp EEEEETTSE
T ss_pred EEEEcCCCe
Confidence 999999998
No 385
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.59 E-value=0.51 Score=43.02 Aligned_cols=161 Identities=13% Similarity=0.185 Sum_probs=101.5
Q ss_pred ccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEE
Q 010754 212 EGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLAT 291 (502)
Q Consensus 212 ~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s 291 (502)
.|-+..|.++.|+|+.+.|++........||=..+|..+..+... . -+..-.+.|..+|++.++
T Consensus 82 ~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~-----------g-----~~DpE~Ieyig~n~fvi~ 145 (316)
T COG3204 82 LGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLT-----------G-----FSDPETIEYIGGNQFVIV 145 (316)
T ss_pred ccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEeccc-----------c-----cCChhHeEEecCCEEEEE
Confidence 344566999999999988888877777777766666543322111 1 234567778888888877
Q ss_pred EECCCeEEEEECCCc--e------EEEec--Cc-cCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEE---ee--
Q 010754 292 GSYDGQARIWSTNGD--L------KCTLS--KH-KGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF---EF-- 355 (502)
Q Consensus 292 ~~~dg~i~iwd~~~~--~------~~~~~--~~-~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~---~~-- 355 (502)
-=.++.+.++.++.. . ...+. .+ +...-.++|.|....|+.+-.-+-+.||.+..+...... ..
T Consensus 146 dER~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~ 225 (316)
T COG3204 146 DERDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPT 225 (316)
T ss_pred ehhcceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcc
Confidence 777888888875422 1 11111 12 556789999999988888887777777765432211000 00
Q ss_pred -----ccCCeEEEEec--CCCEEEEEeCCCeEEEEEcCCC
Q 010754 356 -----HSGPTLDVDWR--NNVSFATSSTDNMIYVCKIGEN 388 (502)
Q Consensus 356 -----~~~~v~~v~~~--~~~~~~~~~~d~~i~i~d~~~~ 388 (502)
.-..+..+.|. .+..++.+..++.+.-.|....
T Consensus 226 ~~~~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~~G~ 265 (316)
T COG3204 226 ADRDLFVLDVSGLEFNAITNSLLVLSDESRRLLEVDLSGE 265 (316)
T ss_pred cccceEeeccccceecCCCCcEEEEecCCceEEEEecCCC
Confidence 11234555664 4566777778888877776544
No 386
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=96.53 E-value=0.01 Score=38.10 Aligned_cols=29 Identities=28% Similarity=0.614 Sum_probs=27.5
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEec
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTI 244 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~ 244 (502)
..|.+++|+|...+||.|+.||.|.++.+
T Consensus 12 ~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl 40 (47)
T PF12894_consen 12 SRVSCMSWCPTMDLIALGTEDGEVLVYRL 40 (47)
T ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEEC
Confidence 56899999999999999999999999998
No 387
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=96.53 E-value=0.5 Score=44.27 Aligned_cols=152 Identities=13% Similarity=0.165 Sum_probs=82.7
Q ss_pred ecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcc
Q 010754 311 LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRP 390 (502)
Q Consensus 311 ~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~ 390 (502)
...-.+.+..+.-+++|.++++++......-||--.......-......+..|.|.++..+......|.|+.=+....
T Consensus 140 ~~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~~Gg~~~~s~~~~~-- 217 (302)
T PF14870_consen 140 VSETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLARGGQIQFSDDPDD-- 217 (302)
T ss_dssp E-S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEETTTEEEEEE-TTE--
T ss_pred ccCCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEeCCcEEEEccCCCC--
Confidence 344557788888899999999887777777888654444544455677899999999988877778898888772211
Q ss_pred eEEEec-------CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEec---cCCCcEEEEEEccCCCCCCCCCc
Q 010754 391 IKTFAG-------HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR---EHSKEIYTIRWSPTGSGTNNPNQ 460 (502)
Q Consensus 391 ~~~~~~-------h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~---~h~~~i~~v~~sp~g~~~~~~~~ 460 (502)
...+.. ..-.+..++|.+++...|+|+. |.+ +.....|+--.... .-...++.|.|.+...
T Consensus 218 ~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~-G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~------- 288 (302)
T PF14870_consen 218 GETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGS-GTL-LVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDK------- 288 (302)
T ss_dssp EEEE---B-TTSS--S-EEEEEESSSS-EEEEEST-T-E-EEESSTTSS-EE-GGGTTSSS---EEEEEETTE-------
T ss_pred ccccccccCCcccCceeeEEEEecCCCCEEEEeCC-ccE-EEeCCCCccceECccccCCCCceEEEEEcCCCc-------
Confidence 112211 1234889999999888876665 433 34444444333332 3345689999976643
Q ss_pred cEEEEeecCceEEE
Q 010754 461 QLILARLIPYFLYW 474 (502)
Q Consensus 461 ~l~las~~~~~~iw 474 (502)
.++.+.++.+.-|
T Consensus 289 -gf~lG~~G~ll~~ 301 (302)
T PF14870_consen 289 -GFVLGQDGVLLRY 301 (302)
T ss_dssp -EEEE-STTEEEEE
T ss_pred -eEEECCCcEEEEe
Confidence 3555555655444
No 388
>KOG3630 consensus Nuclear pore complex, Nup214/CAN component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=96.24 E-value=0.045 Score=58.13 Aligned_cols=136 Identities=14% Similarity=0.174 Sum_probs=87.3
Q ss_pred CCeEEEEEecCCCEEEEEec--CCeEEEEEcCCCceEE-----EEe------eccCCeEEEEecCC--CEEEEEeCCCeE
Q 010754 316 GPIFSLKWNKKGDYLLTGSC--DKTAIVWDVKTEEWKQ-----QFE------FHSGPTLDVDWRNN--VSFATSSTDNMI 380 (502)
Q Consensus 316 ~~v~~l~~~~~~~~l~s~~~--d~~i~~wd~~~~~~~~-----~~~------~~~~~v~~v~~~~~--~~~~~~~~d~~i 380 (502)
.+|..+..++++...++... +-.|..||+++-..-. -+. .......++.|.|. ..++++..|+.|
T Consensus 101 ~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl 180 (1405)
T KOG3630|consen 101 IPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSL 180 (1405)
T ss_pred ccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccch
Confidence 45666666777765554333 4478999987543211 011 12234567778664 447788899999
Q ss_pred EEEEcCCCcc-eEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEecc----CCCcEEEEEEccCCC
Q 010754 381 YVCKIGENRP-IKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE----HSKEIYTIRWSPTGS 453 (502)
Q Consensus 381 ~i~d~~~~~~-~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~----h~~~i~~v~~sp~g~ 453 (502)
++..+..... +.++. -....++++|+|.|+.++.|-..|++.-|... .+....+.. ....|.+|+|--.-.
T Consensus 181 ~V~~~~~~~~~v~s~p-~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~-leik~~ip~Pp~~e~yrvl~v~Wl~t~e 256 (1405)
T KOG3630|consen 181 RVKSTKQLAQNVTSFP-VTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS-LEIKSEIPEPPVEENYRVLSVTWLSTQE 256 (1405)
T ss_pred hhhhhhhhhhhhcccC-cccceeeEEeccccceeeEecCCCeEEEeecc-cceeecccCCCcCCCcceeEEEEeccee
Confidence 9888765433 33333 45678999999999999999999999888743 332233321 135688999977643
No 389
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=96.16 E-value=0.0074 Score=62.11 Aligned_cols=171 Identities=12% Similarity=0.141 Sum_probs=97.7
Q ss_pred CCCCeEEEEECC-CCCEEEEEECCCeEEEEECC---CceEEE-----ecCccCCeEEEEEec---CCCEEEEEecCCeEE
Q 010754 273 KSKDVTTLDWNG-EGTLLATGSYDGQARIWSTN---GDLKCT-----LSKHKGPIFSLKWNK---KGDYLLTGSCDKTAI 340 (502)
Q Consensus 273 ~~~~v~~l~~s~-~g~~l~s~~~dg~i~iwd~~---~~~~~~-----~~~~~~~v~~l~~~~---~~~~l~s~~~d~~i~ 340 (502)
..+.|..+.|.. +...++ -.-|.+.||+++ |+.... .......+.-+.|.| +.-++..+..+++|+
T Consensus 131 f~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~ 208 (1283)
T KOG1916|consen 131 FPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGEIR 208 (1283)
T ss_pred CCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCcee
Confidence 345677777643 222222 223778999854 443322 223334455566665 455666677778888
Q ss_pred EEEcCCCceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCC
Q 010754 341 VWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDV 420 (502)
Q Consensus 341 ~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg 420 (502)
+....+... ..|..|...+.++++...+.+...+ .||||..||+++.||
T Consensus 209 lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~------------------------------lSpDGtv~a~a~~dG 257 (1283)
T KOG1916|consen 209 LLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLAS------------------------------LSPDGTVFAWAISDG 257 (1283)
T ss_pred EeeechHHH-HHHHhcCCCcccHHHHhhchhhhee------------------------------eCCCCcEEEEeecCC
Confidence 776654332 2344477777777665444332221 799999999999999
Q ss_pred cEEEEEC-----CCCeeEEEeccCC-CcEEEEEEccCCCCCCC-CCccEEEEeec--CceEEEEe
Q 010754 421 TAKIWNM-----KQDKYVHDLREHS-KEIYTIRWSPTGSGTNN-PNQQLILARLI--PYFLYWIC 476 (502)
Q Consensus 421 ~i~iwd~-----~~~~~~~~~~~h~-~~i~~v~~sp~g~~~~~-~~~~l~las~~--~~~~iw~~ 476 (502)
.+++|.+ ..-.|++..+.|+ .+-.|.-|+..-..... +...+++.+.| ..+++|.+
T Consensus 258 ~v~f~Qiyi~g~~~~rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~ 322 (1283)
T KOG1916|consen 258 SVGFYQIYITGKIVHRCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAE 322 (1283)
T ss_pred ccceeeeeeeccccHhhhhccCCCCCCCceeeeeccccccCCccceeEEEEecccCCcceeEeec
Confidence 9888875 3445777788887 44333334333332222 23334444444 44788854
No 390
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=96.10 E-value=0.77 Score=43.25 Aligned_cols=156 Identities=14% Similarity=0.134 Sum_probs=91.5
Q ss_pred CeEEEEeCCCcEEEEecCCC-CccCCCCCCCceeEEEeeecCccccCCCC-eEEEEECCCCCEEEEEECCCeEEEEECCC
Q 010754 228 SLLASGSGDSTARIWTIADG-TSNGGAQNGPLNVLVLKHVKGRTNEKSKD-VTTLDWNGEGTLLATGSYDGQARIWSTNG 305 (502)
Q Consensus 228 ~~l~sgs~dg~v~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~l~~s~~g~~l~s~~~dg~i~iwd~~~ 305 (502)
.-+.+-|.||++.-..+... +.. .+... .+.....+ +..-++...+..++--+++|.|+--|+.+
T Consensus 148 ~~F~~lC~DGsl~~v~Ld~~Gk~~------------~~~t~-~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg 214 (342)
T PF06433_consen 148 RGFSMLCGDGSLLTVTLDADGKEA------------QKSTK-VFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSG 214 (342)
T ss_dssp TEEEEEETTSCEEEEEETSTSSEE------------EEEEE-ESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETT
T ss_pred CceEEEecCCceEEEEECCCCCEe------------Eeecc-ccCCCCcccccccceECCCCeEEEEecCCEEEEEeccC
Confidence 46888899999999998843 311 11111 11111122 22334555666666688999999998876
Q ss_pred ceEEEecC-------------ccCCeEEEEEecCCCEEEEEec---CC-------eEEEEEcCCCceEEEEeeccCCeEE
Q 010754 306 DLKCTLSK-------------HKGPIFSLKWNKKGDYLLTGSC---DK-------TAIVWDVKTEEWKQQFEFHSGPTLD 362 (502)
Q Consensus 306 ~~~~~~~~-------------~~~~v~~l~~~~~~~~l~s~~~---d~-------~i~~wd~~~~~~~~~~~~~~~~v~~ 362 (502)
........ -.+.-.-+++++..+.|++.-. ++ .|.++|+.+++.+.++... .++.+
T Consensus 215 ~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~-~~~~S 293 (342)
T PF06433_consen 215 DSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLE-HPIDS 293 (342)
T ss_dssp SSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEE-EEESE
T ss_pred CcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCC-Cccce
Confidence 54322111 1223345777776666555322 11 5888899999999888753 34556
Q ss_pred EEecCCC--EEEE-EeCCCeEEEEEcCCCcceEEEecC
Q 010754 363 VDWRNNV--SFAT-SSTDNMIYVCKIGENRPIKTFAGH 397 (502)
Q Consensus 363 v~~~~~~--~~~~-~~~d~~i~i~d~~~~~~~~~~~~h 397 (502)
|..+.+. .|++ ...++.+.+||..+++.++++.+-
T Consensus 294 i~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~l 331 (342)
T PF06433_consen 294 IAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQL 331 (342)
T ss_dssp EEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE---
T ss_pred EEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhcc
Confidence 6665443 3444 456899999999999999888743
No 391
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=96.06 E-value=0.36 Score=49.90 Aligned_cols=188 Identities=18% Similarity=0.201 Sum_probs=104.9
Q ss_pred CCCeEEEEeCC------CcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCC---
Q 010754 226 AGSLLASGSGD------STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDG--- 296 (502)
Q Consensus 226 ~~~~l~sgs~d------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg--- 296 (502)
++.+.++|+.| .++..||..+++..... + -........+.. -+|.+.|+|+.||
T Consensus 332 ~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a---~----------M~~~R~~~~v~~----l~g~iYavGG~dg~~~ 394 (571)
T KOG4441|consen 332 NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVA---P----------MNTKRSDFGVAV----LDGKLYAVGGFDGEKS 394 (571)
T ss_pred CCEEEEEccccCCCcccceEEEecCCCCceeccC---C----------ccCccccceeEE----ECCEEEEEeccccccc
Confidence 46788899888 34667776665432100 0 000011112222 2678889999886
Q ss_pred --eEEEEECCCceEEEecCccCCeEEEEEe-cCCCEEEEEecCC------eEEEEEcCCCceEEEEeecc-CCeEEEEec
Q 010754 297 --QARIWSTNGDLKCTLSKHKGPIFSLKWN-KKGDYLLTGSCDK------TAIVWDVKTEEWKQQFEFHS-GPTLDVDWR 366 (502)
Q Consensus 297 --~i~iwd~~~~~~~~~~~~~~~v~~l~~~-~~~~~l~s~~~d~------~i~~wd~~~~~~~~~~~~~~-~~v~~v~~~ 366 (502)
.|-.||..............+..+.... -+|...++|+.++ ++..||..+.++...-.... ..-..++..
T Consensus 395 l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~a~~ 474 (571)
T KOG4441|consen 395 LNSVECYDPVTNKWTPVAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFGVAVL 474 (571)
T ss_pred cccEEEecCCCCcccccCCCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccceEEEE
Confidence 4777887765554444333333333322 2567777777554 57888988887654322211 122335666
Q ss_pred CCCEEEEEeCCCe-----EEEEEcCCCcceEE--EecCCCcEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCee
Q 010754 367 NNVSFATSSTDNM-----IYVCKIGENRPIKT--FAGHQGEVNCVKWDPTGSLLASCSDDV-----TAKIWNMKQDKY 432 (502)
Q Consensus 367 ~~~~~~~~~~d~~-----i~i~d~~~~~~~~~--~~~h~~~i~~l~~sp~g~~las~s~dg-----~i~iwd~~~~~~ 432 (502)
.+..++.|+.|+. |..||..+.+-... +......+-.+.+ ++...+.|+.|| +|..||..+.+.
T Consensus 475 ~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~~--~~~ly~vGG~~~~~~l~~ve~ydp~~d~W 550 (571)
T KOG4441|consen 475 NGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSPRSAVGVVVL--GGKLYAVGGFDGNNNLNTVECYDPETDTW 550 (571)
T ss_pred CCEEEEECCccCCCccceEEEEcCCCCceeEcccCccccccccEEEE--CCEEEEEecccCccccceeEEcCCCCCce
Confidence 7777888887762 67788777653222 2222222222332 467778888775 466777655543
No 392
>KOG1897 consensus Damage-specific DNA binding complex, subunit DDB1 [Replication, recombination and repair]
Probab=95.94 E-value=2.9 Score=44.55 Aligned_cols=135 Identities=16% Similarity=0.160 Sum_probs=82.2
Q ss_pred CCeEEEEEecCCCEEEEEecC--------------CeEEEEEcCCCceEEEEeecc----CCeEEEEecC--CCEEEEEe
Q 010754 316 GPIFSLKWNKKGDYLLTGSCD--------------KTAIVWDVKTEEWKQQFEFHS----GPTLDVDWRN--NVSFATSS 375 (502)
Q Consensus 316 ~~v~~l~~~~~~~~l~s~~~d--------------~~i~~wd~~~~~~~~~~~~~~----~~v~~v~~~~--~~~~~~~~ 375 (502)
.....+++.+....+.+.+.- ..++++|-.+.+.+....... -.+.++.|.+ +..+++|.
T Consensus 715 ~~prrI~~q~~sl~~~v~s~r~e~~~~~~~ee~~~s~l~vlD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT 794 (1096)
T KOG1897|consen 715 ESPRRICYQESSLTFGVLSNRIESSAEYYGEEYEVSFLRVLDQNTFEVLSSHEFERNETALSIISCKFTDDPNTYYVVGT 794 (1096)
T ss_pred CChhheEecccceEEEEEecccccchhhcCCcceEEEEEEecCCceeEEeeccccccceeeeeeeeeecCCCceEEEEEE
Confidence 345667777644444443321 146677766665544433221 1344455644 44566654
Q ss_pred ----------CCCeEEEEEcCCCcceEEEecC--CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcE
Q 010754 376 ----------TDNMIYVCKIGENRPIKTFAGH--QGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEI 443 (502)
Q Consensus 376 ----------~d~~i~i~d~~~~~~~~~~~~h--~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i 443 (502)
..|.|.+|.......+.....+ .+.+.++..- +|++||.- ...|++|++.+.+.++.-..|..++
T Consensus 795 ~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~f-ngkllA~I--n~~vrLye~t~~~eLr~e~~~~~~~ 871 (1096)
T KOG1897|consen 795 GLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVEF-NGKLLAGI--NQSVRLYEWTTERELRIECNISNPI 871 (1096)
T ss_pred EeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhhh-CCeEEEec--CcEEEEEEccccceehhhhcccCCe
Confidence 3578888888775555444333 3455555432 68777765 4579999999987776666788888
Q ss_pred EEEEEccCCC
Q 010754 444 YTIRWSPTGS 453 (502)
Q Consensus 444 ~~v~~sp~g~ 453 (502)
..+...-.|.
T Consensus 872 ~aL~l~v~gd 881 (1096)
T KOG1897|consen 872 IALDLQVKGD 881 (1096)
T ss_pred EEEEEEecCc
Confidence 8888888877
No 393
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=95.90 E-value=2.1 Score=42.61 Aligned_cols=165 Identities=15% Similarity=0.174 Sum_probs=88.1
Q ss_pred eEEEEECCCCCEEEEE-ECCC----eEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCC-----------eEE
Q 010754 277 VTTLDWNGEGTLLATG-SYDG----QARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDK-----------TAI 340 (502)
Q Consensus 277 v~~l~~s~~g~~l~s~-~~dg----~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~-----------~i~ 340 (502)
+..+.++|+|+++|.+ +..| .|+++|+.++....-.-.......+.|.++++.|+....+. .|+
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~ 205 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVY 205 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEE
T ss_pred eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccccccceEEEeCCCCEEEEEEeCcccccccCCCCcEEE
Confidence 4567899999988866 3334 59999997654332111111223499999988877655433 378
Q ss_pred EEEcCCCceE--EEEeeccCC--eEEEEecCCCEEE--EEeC--C-CeEEEEEcCCC----cceEEEecCCCcE-EEEEE
Q 010754 341 VWDVKTEEWK--QQFEFHSGP--TLDVDWRNNVSFA--TSST--D-NMIYVCKIGEN----RPIKTFAGHQGEV-NCVKW 406 (502)
Q Consensus 341 ~wd~~~~~~~--~~~~~~~~~--v~~v~~~~~~~~~--~~~~--d-~~i~i~d~~~~----~~~~~~~~h~~~i-~~l~~ 406 (502)
.|.+.+.... ..+...... ...+..+.++.++ .... + ..+++.++..+ .....+......+ ..+..
T Consensus 206 ~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v~~ 285 (414)
T PF02897_consen 206 RHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYVDH 285 (414)
T ss_dssp EEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEEEE
T ss_pred EEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEEEc
Confidence 8888766432 444444333 5667776665532 2322 3 45888888774 2333443333333 33443
Q ss_pred cCCCCEEEEEeC---CCcEEEEECCCCee---EEEeccCCCc
Q 010754 407 DPTGSLLASCSD---DVTAKIWNMKQDKY---VHDLREHSKE 442 (502)
Q Consensus 407 sp~g~~las~s~---dg~i~iwd~~~~~~---~~~~~~h~~~ 442 (502)
. .+.+++.... .+.|.-.++.+... ...+..+...
T Consensus 286 ~-~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~ 326 (414)
T PF02897_consen 286 H-GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDED 326 (414)
T ss_dssp E-TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSS
T ss_pred c-CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCc
Confidence 3 4444444433 35666677766542 2244445543
No 394
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=95.87 E-value=0.27 Score=49.04 Aligned_cols=145 Identities=16% Similarity=0.271 Sum_probs=88.7
Q ss_pred ccCCeEEEEEecCCCEE-EEEe--cCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCC-----EEEEEeCCCeEEEEEc
Q 010754 314 HKGPIFSLKWNKKGDYL-LTGS--CDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV-----SFATSSTDNMIYVCKI 385 (502)
Q Consensus 314 ~~~~v~~l~~~~~~~~l-~s~~--~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~-----~~~~~~~d~~i~i~d~ 385 (502)
--.+|..++|. ||+.+ ++.- .+|.+++=|. ..+.+| ..|..+.|.|-. .+++.-....|.+|.+
T Consensus 18 AiHPvhGlaWT-DGkqVvLT~L~l~~gE~kfGds---~viGqF----EhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL 89 (671)
T PF15390_consen 18 AIHPVHGLAWT-DGKQVVLTDLQLHNGEPKFGDS---KVIGQF----EHVHGLSWAPPCTADTPALLAVQHKKHVTVWQL 89 (671)
T ss_pred hhccccceEec-CCCEEEEEeeeeeCCccccCCc---cEeecc----ceeeeeeecCcccCCCCceEEEeccceEEEEEe
Confidence 34688999997 55544 4432 2444444332 223333 357889997642 4777778899999998
Q ss_pred CCC-----cceEEEecC-CC----cEEEEEEcCCCCEEEEEeCCCcEEEEECCCC--eeEEEeccCCCcEEEEEEccCCC
Q 010754 386 GEN-----RPIKTFAGH-QG----EVNCVKWDPTGSLLASCSDDVTAKIWNMKQD--KYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 386 ~~~-----~~~~~~~~h-~~----~i~~l~~sp~g~~las~s~dg~i~iwd~~~~--~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
... +.+..-..+ .. --.++.|+|....|+.-.....-.+++++.. .....++ ..+-|.+.+|.+||+
T Consensus 90 ~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~-~~G~IhCACWT~DG~ 168 (671)
T PF15390_consen 90 CPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIK-TSGLIHCACWTKDGQ 168 (671)
T ss_pred ccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEecc-CCceEEEEEecCcCC
Confidence 632 222221111 11 1235789999998887776655556666543 3334454 556799999999999
Q ss_pred CCCCCCccEEEEeec-CceEEE
Q 010754 454 GTNNPNQQLILARLI-PYFLYW 474 (502)
Q Consensus 454 ~~~~~~~~l~las~~-~~~~iw 474 (502)
+|++|-++ -...+|
T Consensus 169 -------RLVVAvGSsLHSyiW 183 (671)
T PF15390_consen 169 -------RLVVAVGSSLHSYIW 183 (671)
T ss_pred -------EEEEEeCCeEEEEEe
Confidence 77777666 224555
No 395
>KOG2444 consensus WD40 repeat protein [General function prediction only]
Probab=95.83 E-value=0.042 Score=47.81 Aligned_cols=104 Identities=14% Similarity=0.184 Sum_probs=59.3
Q ss_pred CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCC-
Q 010754 227 GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG- 305 (502)
Q Consensus 227 ~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~- 305 (502)
+..+++|+.+|.|.+|+..--.... .........-.+.+.--.++.+.++++.||.|+.|+...
T Consensus 70 ~~~~~vG~~dg~v~~~n~n~~g~~~---------------d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~ 134 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWNLEGAHS---------------DRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPN 134 (238)
T ss_pred CceEEeecccceEEEecCCccchHH---------------HhhhcccccceeccccccccceeEEeccCCceeeeccccC
Confidence 4568999999999999876211100 000000111122222233566889999999999999764
Q ss_pred ceEEEecCcc-CCeEEEEEecCCCEEEEE--ecCCeEEEEEcC
Q 010754 306 DLKCTLSKHK-GPIFSLKWNKKGDYLLTG--SCDKTAIVWDVK 345 (502)
Q Consensus 306 ~~~~~~~~~~-~~v~~l~~~~~~~~l~s~--~~d~~i~~wd~~ 345 (502)
+.......|. .++..+..+..+..+..+ |.|..++.|++.
T Consensus 135 k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve 177 (238)
T KOG2444|consen 135 KVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVE 177 (238)
T ss_pred ceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchh
Confidence 4444444555 444444444445555555 556666666654
No 396
>PRK13684 Ycf48-like protein; Provisional
Probab=95.65 E-value=2.2 Score=41.00 Aligned_cols=150 Identities=11% Similarity=0.094 Sum_probs=84.7
Q ss_pred cCCeEEEEEecCCCEEEEEecCCeEEE-EEcCCCceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEE
Q 010754 315 KGPIFSLKWNKKGDYLLTGSCDKTAIV-WDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKT 393 (502)
Q Consensus 315 ~~~v~~l~~~~~~~~l~s~~~d~~i~~-wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~ 393 (502)
...+.++.+.|++.+++++ ..|.+.. +|-....+..........+.++.+.+++.++..+..|.+++=....+..-..
T Consensus 172 ~g~~~~i~~~~~g~~v~~g-~~G~i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg~~G~~~~~s~d~G~sW~~ 250 (334)
T PRK13684 172 AGVVRNLRRSPDGKYVAVS-SRGNFYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLARGGQIRFNDPDDLESWSK 250 (334)
T ss_pred cceEEEEEECCCCeEEEEe-CCceEEEEcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEecCCEEEEccCCCCCcccc
Confidence 4578899999987666554 4554443 2322122333333345578888888877776667778765422333332111
Q ss_pred Eec----CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEec---cCCCcEEEEEEccCCCCCCCCCccEEEEe
Q 010754 394 FAG----HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR---EHSKEIYTIRWSPTGSGTNNPNQQLILAR 466 (502)
Q Consensus 394 ~~~----h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~---~h~~~i~~v~~sp~g~~~~~~~~~l~las 466 (502)
... ....+..+.+.|++..+++| .+|.|. .....++.-.... .-....+.+.|..++. .++++
T Consensus 251 ~~~~~~~~~~~l~~v~~~~~~~~~~~G-~~G~v~-~S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~--------~~~~G 320 (334)
T PRK13684 251 PIIPEITNGYGYLDLAYRTPGEIWAGG-GNGTLL-VSKDGGKTWEKDPVGEEVPSNFYKIVFLDPEK--------GFVLG 320 (334)
T ss_pred ccCCccccccceeeEEEcCCCCEEEEc-CCCeEE-EeCCCCCCCeECCcCCCCCcceEEEEEeCCCc--------eEEEC
Confidence 111 12357889999988766554 566554 4444444333332 2223588888887765 35555
Q ss_pred ecCceEEEE
Q 010754 467 LIPYFLYWI 475 (502)
Q Consensus 467 ~~~~~~iw~ 475 (502)
..+.+..|.
T Consensus 321 ~~G~il~~~ 329 (334)
T PRK13684 321 QRGVLLRYV 329 (334)
T ss_pred CCceEEEec
Confidence 556655543
No 397
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=95.59 E-value=0.61 Score=48.01 Aligned_cols=108 Identities=15% Similarity=0.261 Sum_probs=73.5
Q ss_pred eEEEEECCCCCEEEEEECCCeEEEEECCCceEEEec--CccCCeEEEEEe--cCCCEEEEEecCCeEEEEEcC-------
Q 010754 277 VTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLS--KHKGPIFSLKWN--KKGDYLLTGSCDKTAIVWDVK------- 345 (502)
Q Consensus 277 v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~--~~~~~v~~l~~~--~~~~~l~s~~~d~~i~~wd~~------- 345 (502)
.+-+.-+.-++..++-+....+.|||.++.....-. ...+.|.++.|. |+|+.+++.+..+.|.+|--.
T Consensus 32 ~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~ 111 (631)
T PF12234_consen 32 PSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNK 111 (631)
T ss_pred cceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcC
Confidence 444444555555555455568999998865533222 347889999996 688999999999999999531
Q ss_pred --CCceEEEEee---ccCCeEEEEecCCCEEEEEeCCCeEEEEEc
Q 010754 346 --TEEWKQQFEF---HSGPTLDVDWRNNVSFATSSTDNMIYVCKI 385 (502)
Q Consensus 346 --~~~~~~~~~~---~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~ 385 (502)
+...++.+.. ...+|.+..|.+++.+++|+ ++.+.|+|-
T Consensus 112 ~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s-GNqlfv~dk 155 (631)
T PF12234_consen 112 GPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS-GNQLFVFDK 155 (631)
T ss_pred CcccceeEEEEeecCCCCCccceeEecCCeEEEEe-CCEEEEECC
Confidence 1123333322 33579999999999888876 456777764
No 398
>KOG2280 consensus Vacuolar assembly/sorting protein VPS16 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.59 E-value=0.72 Score=47.37 Aligned_cols=155 Identities=14% Similarity=0.244 Sum_probs=92.7
Q ss_pred CeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEE----eeccCCeEEEEecCCCEE
Q 010754 296 GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF----EFHSGPTLDVDWRNNVSF 371 (502)
Q Consensus 296 g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~----~~~~~~v~~v~~~~~~~~ 371 (502)
-.|+||+..|.......-..+.+..+.|+.+ ..|++...+|++++|++-.. .+..+ ......|..+.+..++.+
T Consensus 64 ~~I~If~~sG~lL~~~~w~~~~lI~mgWs~~-eeLI~v~k~g~v~Vy~~~ge-~ie~~svg~e~~~~~I~ec~~f~~GVa 141 (829)
T KOG2280|consen 64 PYIRIFNISGQLLGRILWKHGELIGMGWSDD-EELICVQKDGTVHVYGLLGE-FIESNSVGFESQMSDIVECRFFHNGVA 141 (829)
T ss_pred eeEEEEeccccchHHHHhcCCCeeeecccCC-ceEEEEeccceEEEeecchh-hhcccccccccccCceeEEEEecCceE
Confidence 4689999998887766655668899999976 46777789999999997432 22211 111122322222222222
Q ss_pred EEEeCCCeEEEEEcCC-----------------------C-------------------------cceEEEecCCCcEEE
Q 010754 372 ATSSTDNMIYVCKIGE-----------------------N-------------------------RPIKTFAGHQGEVNC 403 (502)
Q Consensus 372 ~~~~~d~~i~i~d~~~-----------------------~-------------------------~~~~~~~~h~~~i~~ 403 (502)
+....+..+.+-+... . .....+....+.+..
T Consensus 142 vlt~~g~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~~~~~q~~~~~~q~~~~~~~~~~~~k 221 (829)
T KOG2280|consen 142 VLTVSGQVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVGLHICQVEESRVQLHALSWPNSSVVK 221 (829)
T ss_pred EEecCCcEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhhhcccceecccccccccCCCCceEEE
Confidence 2221111111111110 0 000011111245778
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEec--cCCCcEEEEEEccCCC
Q 010754 404 VKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR--EHSKEIYTIRWSPTGS 453 (502)
Q Consensus 404 l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~--~h~~~i~~v~~sp~g~ 453 (502)
+..||+.++||--..+|.|.+-++...+++..+. .|.. --.++|.-+..
T Consensus 222 i~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~~~~~~~-p~qm~Wcgnda 272 (829)
T KOG2280|consen 222 ISVSPNRRFLALYTETGKIWVVSIDLSQILCEFNCTDHDP-PKQMAWCGNDA 272 (829)
T ss_pred EEEcCCcceEEEEecCCcEEEEecchhhhhhccCCCCCCc-hHhceeecCCc
Confidence 8999999999999999999999988877776666 3333 34788887765
No 399
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=95.58 E-value=1.1 Score=44.99 Aligned_cols=126 Identities=16% Similarity=0.261 Sum_probs=73.8
Q ss_pred cCCCceEEEEEcCC----CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCE
Q 010754 213 GHTSEVCACAWSPA----GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 288 (502)
Q Consensus 213 ~H~~~V~~~~~~p~----~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~ 288 (502)
|....|..+.|.|- ...|+.......|.||.+.-..... ...-......+...+ .---..+.|+|....
T Consensus 54 GqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~----~K~l~sQtcEi~e~~---pvLpQGCVWHPk~~i 126 (671)
T PF15390_consen 54 GQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTER----NKLLMSQTCEIREPF---PVLPQGCVWHPKKAI 126 (671)
T ss_pred eccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCcccc----ccceeeeeeeccCCc---ccCCCcccccCCCce
Confidence 45577999999994 2244455566899999986332110 000000000111110 011235679999888
Q ss_pred EEEEECCCeEEEEECC--CceEEEecCccCCeEEEEEecCCCEEEEEe-cCCeEEEEEcC
Q 010754 289 LATGSYDGQARIWSTN--GDLKCTLSKHKGPIFSLKWNKKGDYLLTGS-CDKTAIVWDVK 345 (502)
Q Consensus 289 l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~-~d~~i~~wd~~ 345 (502)
|++-.....-.++++. +..+..-....+.|.|.+|.+||+.|+++- ..=.-++||-.
T Consensus 127 L~VLT~~dvSV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~ 186 (671)
T PF15390_consen 127 LTVLTARDVSVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSA 186 (671)
T ss_pred EEEEecCceeEeeeeeeCCceEEEeccCCceEEEEEecCcCCEEEEEeCCeEEEEEecCc
Confidence 8877765554555543 333333335668899999999998877653 33456788853
No 400
>KOG1897 consensus Damage-specific DNA binding complex, subunit DDB1 [Replication, recombination and repair]
Probab=95.50 E-value=3.2 Score=44.21 Aligned_cols=202 Identities=13% Similarity=0.218 Sum_probs=122.7
Q ss_pred CCceEEeccCC-------CceEEEEEcCC-CCeEEEEeC----------CCcEEEEecCCCCccCCCCCCCceeEEEeee
Q 010754 205 NSDVTILEGHT-------SEVCACAWSPA-GSLLASGSG----------DSTARIWTIADGTSNGGAQNGPLNVLVLKHV 266 (502)
Q Consensus 205 ~~~~~~l~~H~-------~~V~~~~~~p~-~~~l~sgs~----------dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 266 (502)
.+...++..|. -+|.++.|..| +.+++.|.. .|.|.|+.+.+...+. ..
T Consensus 757 ~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~--------~v----- 823 (1096)
T KOG1897|consen 757 QNTFEVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLE--------LV----- 823 (1096)
T ss_pred CCceeEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCcee--------ee-----
Confidence 34445555554 34566668877 667777742 3555566555422110 00
Q ss_pred cCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCCc-eEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcC
Q 010754 267 KGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK 345 (502)
Q Consensus 267 ~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~ 345 (502)
+...-.+.+.++.-- +|+++ ++-+..|++|+...+ ..+.-..+..++..+...-.|+.+++|..-+++.+.-.+
T Consensus 824 --~e~~v~Gav~aL~~f-ngkll--A~In~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~ 898 (1096)
T KOG1897|consen 824 --AETVVKGAVYALVEF-NGKLL--AGINQSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYK 898 (1096)
T ss_pred --eeeeeccceeehhhh-CCeEE--EecCcEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEEEe
Confidence 001112345555322 45555 455678999997654 666667788899999999999999999988877765443
Q ss_pred --CCceEEEE-eeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCc-------------------ceEEEecCCCcEEE
Q 010754 346 --TEEWKQQF-EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENR-------------------PIKTFAGHQGEVNC 403 (502)
Q Consensus 346 --~~~~~~~~-~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~-------------------~~~~~~~h~~~i~~ 403 (502)
.|.....- ..+....+++....+..++.+..+|.+.+....+.. .+..|. |..-|.+
T Consensus 899 ~~eg~f~evArD~~p~Wmtaveil~~d~ylgae~~gNlf~v~~d~~~~td~eR~~l~~~~~~hlGelvn~f~-hg~lv~~ 977 (1096)
T KOG1897|consen 899 GDEGNFEEVARDYNPNWMTAVEILDDDTYLGAENSGNLFTVRKDSDATTDEERQILEEVGKFHLGELVNKFR-HGSLVMQ 977 (1096)
T ss_pred ccCCceEEeehhhCccceeeEEEecCceEEeecccccEEEEEecCCCCchhhhhcccceeeEEeccceeeee-ecceEee
Confidence 33333222 235667888888888889888899988887665421 122222 3333433
Q ss_pred E--EEcCCCCEEEEEeCCCcEEEE
Q 010754 404 V--KWDPTGSLLASCSDDVTAKIW 425 (502)
Q Consensus 404 l--~~sp~g~~las~s~dg~i~iw 425 (502)
+ ..+|-+..++-|..+|.|-+-
T Consensus 978 ~~~s~~~~~~~vlfgTv~GsIG~i 1001 (1096)
T KOG1897|consen 978 LGDSMIPLEPKVLFGTVNGSIGII 1001 (1096)
T ss_pred ccccccCCCCcEEEEEccceEEEE
Confidence 1 234555567888888887654
No 401
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=95.30 E-value=2.3 Score=39.02 Aligned_cols=148 Identities=10% Similarity=0.036 Sum_probs=84.7
Q ss_pred CeEEEEEecCCCEEEEEe---cCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEEEE-eCCCeEEEEE-cCCCcce
Q 010754 317 PIFSLKWNKKGDYLLTGS---CDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATS-STDNMIYVCK-IGENRPI 391 (502)
Q Consensus 317 ~v~~l~~~~~~~~l~s~~---~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~d~~i~i~d-~~~~~~~ 391 (502)
.+.+.+++++++.++... ....++++.. +....... ....+..-.|.+++.+.+. ..+...+++. ...+...
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~--~~~~~~~~-~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~ 101 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPA--GGPVRPVL-TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGE 101 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcC--CCcceeec-cCCccccccccCCCCEEEEEcCCCceEEEEecCCCcce
Confidence 688899999998877655 2334555543 33232222 2336777788776665544 3444555553 2233221
Q ss_pred -EEEecC--CCcEEEEEEcCCCCEEEEEe---CCCcEEEEECC---CC------eeEEEeccCCCcEEEEEEccCCCCCC
Q 010754 392 -KTFAGH--QGEVNCVKWDPTGSLLASCS---DDVTAKIWNMK---QD------KYVHDLREHSKEIYTIRWSPTGSGTN 456 (502)
Q Consensus 392 -~~~~~h--~~~i~~l~~sp~g~~las~s---~dg~i~iwd~~---~~------~~~~~~~~h~~~i~~v~~sp~g~~~~ 456 (502)
...... ...|+.+.+||||..+|.-. .++.|.|=-+. .+ ..+.........+.+++|.+++.
T Consensus 102 ~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~--- 178 (253)
T PF10647_consen 102 PVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDST--- 178 (253)
T ss_pred eEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCE---
Confidence 111111 12899999999999887666 34667666442 22 11122223346799999999997
Q ss_pred CCCccEEEEeecCceEEEE
Q 010754 457 NPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 457 ~~~~~l~las~~~~~~iw~ 475 (502)
|++.+....-.+|.
T Consensus 179 -----L~V~~~~~~~~~~~ 192 (253)
T PF10647_consen 179 -----LVVLGRSAGGPVVR 192 (253)
T ss_pred -----EEEEeCCCCCceeE
Confidence 44444444444554
No 402
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=95.14 E-value=1.1 Score=43.65 Aligned_cols=136 Identities=10% Similarity=0.170 Sum_probs=75.5
Q ss_pred CCeEEEEEecCCCEEEEEe-----------cCC-eEEEEEcCC--Cce--EEEEeeccCCeEEEEecCCCEEEEEeCCCe
Q 010754 316 GPIFSLKWNKKGDYLLTGS-----------CDK-TAIVWDVKT--EEW--KQQFEFHSGPTLDVDWRNNVSFATSSTDNM 379 (502)
Q Consensus 316 ~~v~~l~~~~~~~~l~s~~-----------~d~-~i~~wd~~~--~~~--~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~ 379 (502)
.....|+|.++|+.+++-. ..+ .|.+++-.. |+. ...+.........+++.+++ +++++....
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV~~~~~i 92 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYVATPPDI 92 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEEeCCCeE
Confidence 3457789999998777643 223 677776432 332 23333334456778887777 444444443
Q ss_pred EEEEEcCCC-----cc---eEEEec----CCCcEEEEEEcCCCCEEEEEeCC-------------------CcEEEEECC
Q 010754 380 IYVCKIGEN-----RP---IKTFAG----HQGEVNCVKWDPTGSLLASCSDD-------------------VTAKIWNMK 428 (502)
Q Consensus 380 i~i~d~~~~-----~~---~~~~~~----h~~~i~~l~~sp~g~~las~s~d-------------------g~i~iwd~~ 428 (502)
.++.|.... +. +..+.. +......++|.|+|.+.++-+.. |.|.-++..
T Consensus 93 ~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~pd 172 (367)
T TIGR02604 93 LFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNPD 172 (367)
T ss_pred EEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEecC
Confidence 334354321 11 122322 13447789999999876655421 345555555
Q ss_pred CCeeEEEeccCCCcEEEEEEccCCC
Q 010754 429 QDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 429 ~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
+++....-.++ .....++|+|+|.
T Consensus 173 g~~~e~~a~G~-rnp~Gl~~d~~G~ 196 (367)
T TIGR02604 173 GGKLRVVAHGF-QNPYGHSVDSWGD 196 (367)
T ss_pred CCeEEEEecCc-CCCccceECCCCC
Confidence 44432222232 3357899999987
No 403
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=95.10 E-value=4.7 Score=41.46 Aligned_cols=200 Identities=10% Similarity=-0.008 Sum_probs=106.4
Q ss_pred CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECC-C
Q 010754 227 GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-G 305 (502)
Q Consensus 227 ~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~-~ 305 (502)
+..|+.++.++.|.-.|..+++.+-......... .... ......-..+++ .+..++.++.|+.+.-+|.. +
T Consensus 69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~-----~~~~-~~~~~~~rg~av--~~~~v~v~t~dg~l~ALDa~TG 140 (527)
T TIGR03075 69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDD-----VIPV-MCCDVVNRGVAL--YDGKVFFGTLDARLVALDAKTG 140 (527)
T ss_pred CCEEEEECCCCcEEEEECCCCceeeEecCCCCcc-----cccc-cccccccccceE--ECCEEEEEcCCCEEEEEECCCC
Confidence 4466667777888888988887543222110000 0000 000000011122 13467778889999999975 5
Q ss_pred ceEEEecCccCC-eEEEEEec--CCCEEEEEe------cCCeEEEEEcCCCceEEEEeeccCC-----------------
Q 010754 306 DLKCTLSKHKGP-IFSLKWNK--KGDYLLTGS------CDKTAIVWDVKTEEWKQQFEFHSGP----------------- 359 (502)
Q Consensus 306 ~~~~~~~~~~~~-v~~l~~~~--~~~~l~s~~------~d~~i~~wd~~~~~~~~~~~~~~~~----------------- 359 (502)
+.+......... -..+.-+| .+..++++. .+|.|..+|..+|+.+-.+......
T Consensus 141 k~~W~~~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~ 220 (527)
T TIGR03075 141 KVVWSKKNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGA 220 (527)
T ss_pred CEEeecccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCccccccccccccccccc
Confidence 555443321100 00111112 123455543 2689999999999987765432111
Q ss_pred --------------e-EEEEecC-CCEEEEEeC-----CC-----------eEEEEEcCCCcceEEEecCCCc-------
Q 010754 360 --------------T-LDVDWRN-NVSFATSST-----DN-----------MIYVCKIGENRPIKTFAGHQGE------- 400 (502)
Q Consensus 360 --------------v-~~v~~~~-~~~~~~~~~-----d~-----------~i~i~d~~~~~~~~~~~~h~~~------- 400 (502)
+ ..+.+.+ .+.+..+.. ++ .|.-.|+++++....|......
T Consensus 221 ~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~ 300 (527)
T TIGR03075 221 KTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGV 300 (527)
T ss_pred CCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCC
Confidence 0 0112222 223333321 11 6777888888887766542221
Q ss_pred --EEEEEEcCCCC---EEEEEeCCCcEEEEECCCCeeEE
Q 010754 401 --VNCVKWDPTGS---LLASCSDDVTAKIWNMKQDKYVH 434 (502)
Q Consensus 401 --i~~l~~sp~g~---~las~s~dg~i~iwd~~~~~~~~ 434 (502)
..-+.+..+|+ .++.+..+|.+++.|-.+|+++.
T Consensus 301 ~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~ 339 (527)
T TIGR03075 301 NEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLS 339 (527)
T ss_pred CCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCceec
Confidence 12233334676 78899999999999999999863
No 404
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=95.09 E-value=0.97 Score=47.07 Aligned_cols=156 Identities=13% Similarity=0.097 Sum_probs=90.2
Q ss_pred CCeEEEEeCCCcEEEEecCCCCccCC------CCCCCceeEEEeeecCccccCCCCeEEEEECC--CCCEEEEEECCCeE
Q 010754 227 GSLLASGSGDSTARIWTIADGTSNGG------AQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG--EGTLLATGSYDGQA 298 (502)
Q Consensus 227 ~~~l~sgs~dg~v~iw~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~--~g~~l~s~~~dg~i 298 (502)
.++|+.+. .+.|.||++........ +...+......... .........|+.|.... +...|+.|..||.|
T Consensus 49 ~n~LFiA~-~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~-~s~~p~PHtIN~i~v~~lg~~EVLl~c~DdG~V 126 (717)
T PF08728_consen 49 RNLLFIAY-QSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRL-ISTWPFPHTINFIKVGDLGGEEVLLLCTDDGDV 126 (717)
T ss_pred CCEEEEEE-CCEEEEEecCCcccccccccccccccCcccccccccc-ccCCCCCceeeEEEecccCCeeEEEEEecCCeE
Confidence 66777766 48999999865432111 00000000000000 00011233466665543 55689999999999
Q ss_pred EEEECCC-------c--------------eEEEecCccCCeEEEEEe--cCCCEEEEEecCCeEEEEEcCCC--ceEE-E
Q 010754 299 RIWSTNG-------D--------------LKCTLSKHKGPIFSLKWN--KKGDYLLTGSCDKTAIVWDVKTE--EWKQ-Q 352 (502)
Q Consensus 299 ~iwd~~~-------~--------------~~~~~~~~~~~v~~l~~~--~~~~~l~s~~~d~~i~~wd~~~~--~~~~-~ 352 (502)
.+|.++. . ....+ .....+++++++ ...++||+++....|.||-.... +... .
T Consensus 127 ~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~-~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~ 205 (717)
T PF08728_consen 127 LAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHL-RVGASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYHVP 205 (717)
T ss_pred EEEEHHHHHHHHHhhccccccccccccCCCCeEe-ecCCceeEEEEEecCcceEEEEecCCceEEEEEEecccccccccc
Confidence 9996420 0 00111 134468999998 77788888888888888755432 1111 0
Q ss_pred EeeccCCeEEEEecCCC-------EEEEEeCCCeEEEEEc
Q 010754 353 FEFHSGPTLDVDWRNNV-------SFATSSTDNMIYVCKI 385 (502)
Q Consensus 353 ~~~~~~~v~~v~~~~~~-------~~~~~~~d~~i~i~d~ 385 (502)
-..+...|.+|+|.++. .+++++-.|.+.+|++
T Consensus 206 s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 206 SHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred ccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 11245568888885432 5778889999998887
No 405
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=95.09 E-value=1.7 Score=39.89 Aligned_cols=144 Identities=15% Similarity=0.182 Sum_probs=89.8
Q ss_pred CCeEEEEECCCCCEEEEEE---CCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEE-cCCCceE
Q 010754 275 KDVTTLDWNGEGTLLATGS---YDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWD-VKTEEWK 350 (502)
Q Consensus 275 ~~v~~l~~s~~g~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd-~~~~~~~ 350 (502)
..+.+.+++++|+.++... ....+.++...+.....+.+ ..+..-.|++++...+....+...+++. ..++...
T Consensus 24 ~~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~~g--~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~ 101 (253)
T PF10647_consen 24 YDVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVLTG--GSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGE 101 (253)
T ss_pred ccccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeeccC--CccccccccCCCCEEEEEcCCCceEEEEecCCCcce
Confidence 3689999999999887766 33466666655544444432 3678889999977666666666666663 3333322
Q ss_pred E-EEeec--cCCeEEEEecCCCE-EEEE---eCCCeEEEEEcC---CC------cceEEEecCCCcEEEEEEcCCCCEEE
Q 010754 351 Q-QFEFH--SGPTLDVDWRNNVS-FATS---STDNMIYVCKIG---EN------RPIKTFAGHQGEVNCVKWDPTGSLLA 414 (502)
Q Consensus 351 ~-~~~~~--~~~v~~v~~~~~~~-~~~~---~~d~~i~i~d~~---~~------~~~~~~~~h~~~i~~l~~sp~g~~la 414 (502)
. ..... ...|..+.+++++. ++.. ..++.|.+--+. .+ .++.........++.+.|.+++.+++
T Consensus 102 ~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V 181 (253)
T PF10647_consen 102 PVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVV 181 (253)
T ss_pred eEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEE
Confidence 1 12211 12799999988765 3333 346777776543 22 12222223356799999999999887
Q ss_pred EEeCCC
Q 010754 415 SCSDDV 420 (502)
Q Consensus 415 s~s~dg 420 (502)
.+...+
T Consensus 182 ~~~~~~ 187 (253)
T PF10647_consen 182 LGRSAG 187 (253)
T ss_pred EeCCCC
Confidence 776543
No 406
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=95.04 E-value=2.1 Score=44.71 Aligned_cols=109 Identities=12% Similarity=0.160 Sum_probs=65.4
Q ss_pred cCCCEEEEEeCCCeEEEEEcCC--------------------CcceEEEecCCCcEEEEEEc--CCCCEEEEEeCCCcEE
Q 010754 366 RNNVSFATSSTDNMIYVCKIGE--------------------NRPIKTFAGHQGEVNCVKWD--PTGSLLASCSDDVTAK 423 (502)
Q Consensus 366 ~~~~~~~~~~~d~~i~i~d~~~--------------------~~~~~~~~~h~~~i~~l~~s--p~g~~las~s~dg~i~ 423 (502)
.....+++|..||.|.+|.+.. -+|...+. -...+++++++ ...++||.++....|.
T Consensus 112 g~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIAVSsNs~~VT 190 (717)
T PF08728_consen 112 GGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIAVSSNSQEVT 190 (717)
T ss_pred CCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEEEecCCceEE
Confidence 4455577777888888886521 01222233 34578999998 8888999999888888
Q ss_pred EEECCCC--eeEE-EeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEeee
Q 010754 424 IWNMKQD--KYVH-DLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICSI 478 (502)
Q Consensus 424 iwd~~~~--~~~~-~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~ 478 (502)
||-.... +... .-..|...|.+|+|-++.. +++..+.+++.|=...+|.+.+
T Consensus 191 VFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~---d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 191 VFAFALVDERFYHVPSHQHSHNIPNVSFLDDDL---DPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred EEEEeccccccccccccccccCCCeeEeecCCC---CCccceEEEEEeccCcEEEEEE
Confidence 8865432 1111 1113566799999999875 2222234444444444454444
No 407
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.95 E-value=2.8 Score=38.14 Aligned_cols=200 Identities=15% Similarity=0.152 Sum_probs=107.0
Q ss_pred ceeeeCCCceEEeccCCCceEEEEEcCCCCeEEEEeCC-----CcEEEEecCCCCccCCCCCCCceeEEEeeecCccccC
Q 010754 199 ESFEIPNSDVTILEGHTSEVCACAWSPAGSLLASGSGD-----STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEK 273 (502)
Q Consensus 199 ~~~~~~~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~d-----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (502)
...-++...-+.+.||. .|||||.+|...-.| |.|-|||...+-. .......|
T Consensus 103 ~pv~~~s~~~RHfyGHG------vfs~dG~~LYATEndfd~~rGViGvYd~r~~fq----------------rvgE~~t~ 160 (366)
T COG3490 103 EPVTLVSQEGRHFYGHG------VFSPDGRLLYATENDFDPNRGVIGVYDAREGFQ----------------RVGEFSTH 160 (366)
T ss_pred CcEEEecccCceeeccc------ccCCCCcEEEeecCCCCCCCceEEEEecccccc----------------eecccccC
Confidence 34445555667778886 799999988877554 6788999874321 12233334
Q ss_pred CCCeEEEEECCCCCEEEEEECCCeEEEE--------------------E-CCCceEE--Eec--CccCCeEEEEEecCCC
Q 010754 274 SKDVTTLDWNGEGTLLATGSYDGQARIW--------------------S-TNGDLKC--TLS--KHKGPIFSLKWNKKGD 328 (502)
Q Consensus 274 ~~~v~~l~~s~~g~~l~s~~~dg~i~iw--------------------d-~~~~~~~--~~~--~~~~~v~~l~~~~~~~ 328 (502)
.-.-..+.|.+||+.++.+. |-|... | ..+.++. ++. .+.-.|..+...++|.
T Consensus 161 GiGpHev~lm~DGrtlvvan--GGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgt 238 (366)
T COG3490 161 GIGPHEVTLMADGRTLVVAN--GGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGT 238 (366)
T ss_pred CcCcceeEEecCCcEEEEeC--CceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCc
Confidence 44566788999999988775 334333 2 1121111 111 2334566777777766
Q ss_pred EEEEEecCCe-----EEEEEcCCCceEEEEeec-------cCCeEEEEecC-CCE-EEEEeCCCeEEEEEcCCCcceEEE
Q 010754 329 YLLTGSCDKT-----AIVWDVKTEEWKQQFEFH-------SGPTLDVDWRN-NVS-FATSSTDNMIYVCKIGENRPIKTF 394 (502)
Q Consensus 329 ~l~s~~~d~~-----i~~wd~~~~~~~~~~~~~-------~~~v~~v~~~~-~~~-~~~~~~d~~i~i~d~~~~~~~~~~ 394 (502)
.++.+-..|. -.+=-...++.+..+... ..-|-+|+... ++. .+++-..+...+||..++..+..-
T Consensus 239 vwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~vv~~a 318 (366)
T COG3490 239 VWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAVVSEA 318 (366)
T ss_pred EEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEEEEEcCCCcEEecc
Confidence 5554433221 111111223333222211 11234455432 333 344445667789999999876433
Q ss_pred ecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 010754 395 AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWN 426 (502)
Q Consensus 395 ~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd 426 (502)
.- ..+..++- ...=++..+.+|.+.++.
T Consensus 319 ~l--~daaGva~--~~~gf~vssg~G~~~~~s 346 (366)
T COG3490 319 AL--PDAAGVAA--AKGGFAVSSGQGRIIFYS 346 (366)
T ss_pred cc--ccccccee--ccCceEEecCCceEEecc
Confidence 21 12233333 333466667788888774
No 408
>KOG2377 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.90 E-value=0.46 Score=45.82 Aligned_cols=139 Identities=16% Similarity=0.208 Sum_probs=89.2
Q ss_pred eEEEEECCCCCEEEEEECCCeEEEEECCC---ceEEEe-cCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceE--
Q 010754 277 VTTLDWNGEGTLLATGSYDGQARIWSTNG---DLKCTL-SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWK-- 350 (502)
Q Consensus 277 v~~l~~s~~g~~l~s~~~dg~i~iwd~~~---~~~~~~-~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~-- 350 (502)
-+.+-|.. .+..+.|...|.+.-|-+.+ .....+ ....++|.+++|++|.+.+++--.+++|.+++....+..
T Consensus 25 sngvFfDD-aNkqlfavrSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~ 103 (657)
T KOG2377|consen 25 SNGVFFDD-ANKQLFAVRSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLE 103 (657)
T ss_pred ccceeecc-CcceEEEEecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhH
Confidence 34444443 34444455557777776543 222222 235679999999999999999999999999987433222
Q ss_pred --EEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCC-cceEEEecCCCcEEEEEEcCCCCEEEEEe
Q 010754 351 --QQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGEN-RPIKTFAGHQGEVNCVKWDPTGSLLASCS 417 (502)
Q Consensus 351 --~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~-~~~~~~~~h~~~i~~l~~sp~g~~las~s 417 (502)
+..+.....|...+|..+..++.....| +-+|.+... +.++..+.|.-.|+--.|.++.+.+.-++
T Consensus 104 ~~~~ck~k~~~IlGF~W~~s~e~A~i~~~G-~e~y~v~pekrslRlVks~~~nvnWy~yc~et~v~LL~t 172 (657)
T KOG2377|consen 104 YTQECKTKNANILGFCWTSSTEIAFITDQG-IEFYQVLPEKRSLRLVKSHNLNVNWYMYCPETAVILLST 172 (657)
T ss_pred HHHHhccCcceeEEEEEecCeeEEEEecCC-eEEEEEchhhhhhhhhhhcccCccEEEEccccceEeeec
Confidence 2223344568999998887777766655 444544332 34555566777788888888877654443
No 409
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=94.88 E-value=3 Score=38.00 Aligned_cols=174 Identities=13% Similarity=0.100 Sum_probs=110.6
Q ss_pred CeEEEEECCCCCEEEEEECCC--eEEEEECCCceEEEecCccCC--eEEEEEecCCCEEEEEecCCeEEEEEcCCCceEE
Q 010754 276 DVTTLDWNGEGTLLATGSYDG--QARIWSTNGDLKCTLSKHKGP--IFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQ 351 (502)
Q Consensus 276 ~v~~l~~s~~g~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~--v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~ 351 (502)
....+.|..+|.++-+.+.-| .|+.+|+.+........-... --.++...+ +.....=.++...+||..+.+.+.
T Consensus 46 FTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d-~l~qLTWk~~~~f~yd~~tl~~~~ 124 (264)
T PF05096_consen 46 FTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGD-KLYQLTWKEGTGFVYDPNTLKKIG 124 (264)
T ss_dssp EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETT-EEEEEESSSSEEEEEETTTTEEEE
T ss_pred cCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECC-EEEEEEecCCeEEEEccccceEEE
Confidence 456778877888888888776 788888875443322211111 123333322 223333457899999999999888
Q ss_pred EEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCC-----CcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 010754 352 QFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQ-----GEVNCVKWDPTGSLLASCSDDVTAKIWN 426 (502)
Q Consensus 352 ~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~-----~~i~~l~~sp~g~~las~s~dg~i~iwd 426 (502)
++... +.-..++ .++..++.+.....++++|..+.+.++++.-.. ..++-+.|- +|...|-.=....|...|
T Consensus 125 ~~~y~-~EGWGLt-~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~IyANVW~td~I~~Id 201 (264)
T PF05096_consen 125 TFPYP-GEGWGLT-SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGKIYANVWQTDRIVRID 201 (264)
T ss_dssp EEE-S-SS--EEE-ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTEEEEEETTSSEEEEEE
T ss_pred EEecC-CcceEEE-cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCEEEEEeCCCCeEEEEe
Confidence 88643 4555666 445667777778899999998877766665332 346778876 677777776777899999
Q ss_pred CCCCeeEEEecc------------C---CCcEEEEEEccCCC
Q 010754 427 MKQDKYVHDLRE------------H---SKEIYTIRWSPTGS 453 (502)
Q Consensus 427 ~~~~~~~~~~~~------------h---~~~i~~v~~sp~g~ 453 (502)
..+|+.+..+.. + ..-.+.|||.|.+.
T Consensus 202 p~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~ 243 (264)
T PF05096_consen 202 PETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETD 243 (264)
T ss_dssp TTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTT
T ss_pred CCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCC
Confidence 999998776520 1 23479999999876
No 410
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=94.75 E-value=3.4 Score=40.58 Aligned_cols=145 Identities=13% Similarity=0.115 Sum_probs=86.1
Q ss_pred eEEEEECCCCCEEEEEECCCeEEEEECCCce-EEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCce-----E
Q 010754 277 VTTLDWNGEGTLLATGSYDGQARIWSTNGDL-KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEW-----K 350 (502)
Q Consensus 277 v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~-----~ 350 (502)
...+..+++|.+++.+.....++-||-.... ...-......+.++.|.+++..++++ .+|.+.. ....++. .
T Consensus 241 f~~v~~~~dG~~~~vg~~G~~~~s~d~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g-~~G~l~~-S~d~G~~~~~~~f 318 (398)
T PLN00033 241 FSTVNRSPDGDYVAVSSRGNFYLTWEPGQPYWQPHNRASARRIQNMGWRADGGLWLLT-RGGGLYV-SKGTGLTEEDFDF 318 (398)
T ss_pred eeeEEEcCCCCEEEEECCccEEEecCCCCcceEEecCCCccceeeeeEcCCCCEEEEe-CCceEEE-ecCCCCcccccce
Confidence 4556677888877777654444445533322 22223345568999999998877665 5555443 3334431 1
Q ss_pred EEEee--ccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEE---ecCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Q 010754 351 QQFEF--HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTF---AGHQGEVNCVKWDPTGSLLASCSDDVTAKIW 425 (502)
Q Consensus 351 ~~~~~--~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~---~~h~~~i~~l~~sp~g~~las~s~dg~i~iw 425 (502)
..... ....+.++.|.+++.+++++..|.+.... ..++.-... ..-...+..+.|.++++.+++| .+|.|.-|
T Consensus 319 ~~~~~~~~~~~l~~v~~~~d~~~~a~G~~G~v~~s~-D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G-~~G~il~~ 396 (398)
T PLN00033 319 EEADIKSRGFGILDVGYRSKKEAWAAGGSGILLRST-DGGKSWKRDKGADNIAANLYSVKFFDDKKGFVLG-NDGVLLRY 396 (398)
T ss_pred eecccCCCCcceEEEEEcCCCcEEEEECCCcEEEeC-CCCcceeEccccCCCCcceeEEEEcCCCceEEEe-CCcEEEEe
Confidence 22211 12348889999888888888989776653 333332222 2224568899998777666554 56766544
No 411
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=94.74 E-value=0.022 Score=58.83 Aligned_cols=204 Identities=14% Similarity=0.147 Sum_probs=112.7
Q ss_pred EEeccCCCceEEEEEcC-CCCeEEEEeCCCcEEEEecCC--CCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC-
Q 010754 209 TILEGHTSEVCACAWSP-AGSLLASGSGDSTARIWTIAD--GTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG- 284 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p-~~~~l~sgs~dg~v~iw~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~- 284 (502)
..++|.++.|-.+.|-. +-..++ -.-|.+.||++.- |+... .+.+. .. ......+.-+.|+|
T Consensus 126 ~l~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~--------~l~v~-~~---~p~gs~~~~V~wcp~ 191 (1283)
T KOG1916|consen 126 ELAKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQP--------QLEVT-PI---TPYGSDPQLVSWCPI 191 (1283)
T ss_pred HHHhcCCCCcccccccccCChHHH--HHhhhhheeehHhhcccccc--------ceEEe-ec---CcCCCCcceeeeccc
Confidence 34677788888888864 222222 2236788898763 22111 11111 11 11123445566665
Q ss_pred --CCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEE-----------EecCCCEEEEEecCCeEEEEEcC-----C
Q 010754 285 --EGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLK-----------WNKKGDYLLTGSCDKTAIVWDVK-----T 346 (502)
Q Consensus 285 --~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~-----------~~~~~~~l~s~~~d~~i~~wd~~-----~ 346 (502)
+.-++..+-.++.|++...+......+.+|...+..++ .+|||+.|+.++.||.++.|-+. .
T Consensus 192 ~~~~~~ic~~~~~~~i~lL~~~ra~~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~ 271 (1283)
T KOG1916|consen 192 AVNKVYICYGLKGGEIRLLNINRALRSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIV 271 (1283)
T ss_pred ccccceeeeccCCCceeEeeechHHHHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeecccc
Confidence 55677777788999988766544444445655544443 58999999999999998888652 2
Q ss_pred CceEEEEeecc-CCeEEEEecCC----------CEEEEEe-CCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCC---
Q 010754 347 EEWKQQFEFHS-GPTLDVDWRNN----------VSFATSS-TDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS--- 411 (502)
Q Consensus 347 ~~~~~~~~~~~-~~v~~v~~~~~----------~~~~~~~-~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~--- 411 (502)
-.+++....|. .+-.|..+... ...++++ .+..+++|.....+++. ...-..|..+. -++|.
T Consensus 272 ~rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cll--~~~~d~v~iV~-p~~~~v~~ 348 (1283)
T KOG1916|consen 272 HRCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCLL--DKLIDGVQIVG-PHDGEVTD 348 (1283)
T ss_pred HhhhhccCCCCCCCceeeeeccccccCCccceeEEEEecccCCcceeEeeccchhhhh--hhcccceEeec-CCCccccc
Confidence 23444445554 33333223221 1133433 34568888877766651 11122333333 22222
Q ss_pred ---------EEEEEeCCCcEEEEECCC
Q 010754 412 ---------LLASCSDDVTAKIWNMKQ 429 (502)
Q Consensus 412 ---------~las~s~dg~i~iwd~~~ 429 (502)
.+++.+-+++|.+|.-+.
T Consensus 349 ~~~~~~~~~~~v~r~v~~~i~~~qn~~ 375 (1283)
T KOG1916|consen 349 LSMCQWMTTRLVSRSVDGTIKIWQNRK 375 (1283)
T ss_pred hhhhHHHHHHHHHhhhHHHHHHhhcch
Confidence 234556788999996544
No 412
>KOG3630 consensus Nuclear pore complex, Nup214/CAN component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=94.73 E-value=0.34 Score=51.87 Aligned_cols=141 Identities=11% Similarity=-0.043 Sum_probs=85.2
Q ss_pred CCeEEEEECCCCCEEEEEE--CCCeEEEEECCCce------EEEec------CccCCeEEEEEecCC-CEEEEEecCCeE
Q 010754 275 KDVTTLDWNGEGTLLATGS--YDGQARIWSTNGDL------KCTLS------KHKGPIFSLKWNKKG-DYLLTGSCDKTA 339 (502)
Q Consensus 275 ~~v~~l~~s~~g~~l~s~~--~dg~i~iwd~~~~~------~~~~~------~~~~~v~~l~~~~~~-~~l~s~~~d~~i 339 (502)
-.+..+..++|+...++.. .+-.|..||+..-. ..-+. .......++.|+|.- ...+++..|+.|
T Consensus 101 ~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl 180 (1405)
T KOG3630|consen 101 IPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSL 180 (1405)
T ss_pred ccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccch
Confidence 3466666677776554443 33478889975311 11111 123345788899854 346677889999
Q ss_pred EEEEcCCCceEEEEeeccCCeEEEEecCCCE-EEEEeCCCeEEEEEcCCCcceEEEec---C-CCcEEEEEEcCCCCEEE
Q 010754 340 IVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAG---H-QGEVNCVKWDPTGSLLA 414 (502)
Q Consensus 340 ~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~---h-~~~i~~l~~sp~g~~la 414 (502)
++.-+........-.......++++|++.+. ++.|-..|++..|...-. ....+.+ . ...|.+|+|-....+|+
T Consensus 181 ~V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~le-ik~~ip~Pp~~e~yrvl~v~Wl~t~eflv 259 (1405)
T KOG3630|consen 181 RVKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLE-IKSEIPEPPVEENYRVLSVTWLSTQEFLV 259 (1405)
T ss_pred hhhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeecccc-eeecccCCCcCCCcceeEEEEecceeEEE
Confidence 9887643322211122345689999988655 888888899988865332 1222211 1 36799999987766665
Q ss_pred EE
Q 010754 415 SC 416 (502)
Q Consensus 415 s~ 416 (502)
+-
T Consensus 260 vy 261 (1405)
T KOG3630|consen 260 VY 261 (1405)
T ss_pred Ee
Confidence 43
No 413
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=94.71 E-value=1.6 Score=42.71 Aligned_cols=142 Identities=11% Similarity=0.119 Sum_probs=77.7
Q ss_pred CCeEEEEECCCCCEEEEEE-----------CCC-eEEEEEC-C--Cc--eEEEecCccCCeEEEEEecCCCEEEEEecCC
Q 010754 275 KDVTTLDWNGEGTLLATGS-----------YDG-QARIWST-N--GD--LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDK 337 (502)
Q Consensus 275 ~~v~~l~~s~~g~~l~s~~-----------~dg-~i~iwd~-~--~~--~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~ 337 (502)
.....|+|.++|+++++-. ..+ .|.+++- + +. ....+...-.....|++.+++ |++++...
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G--lyV~~~~~ 91 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG--VYVATPPD 91 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC--EEEeCCCe
Confidence 3478899999999887753 223 6777753 2 22 223333333456889999888 44444444
Q ss_pred eEEEEEcCCC-----ceEEE---Eeec----cCCeEEEEecCCCEEEEEeCC--------------------CeEEEEEc
Q 010754 338 TAIVWDVKTE-----EWKQQ---FEFH----SGPTLDVDWRNNVSFATSSTD--------------------NMIYVCKI 385 (502)
Q Consensus 338 ~i~~wd~~~~-----~~~~~---~~~~----~~~v~~v~~~~~~~~~~~~~d--------------------~~i~i~d~ 385 (502)
.+++.|.... +.... +... ......+.|.+++.|..+..+ +.|.-++.
T Consensus 92 i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~p 171 (367)
T TIGR02604 92 ILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNP 171 (367)
T ss_pred EEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEec
Confidence 3334454221 21111 2111 223667888777665443221 34555555
Q ss_pred CCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCC
Q 010754 386 GENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD 419 (502)
Q Consensus 386 ~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~d 419 (502)
..+.. ..+.........++|+|+|+++++-..+
T Consensus 172 dg~~~-e~~a~G~rnp~Gl~~d~~G~l~~tdn~~ 204 (367)
T TIGR02604 172 DGGKL-RVVAHGFQNPYGHSVDSWGDVFFCDNDD 204 (367)
T ss_pred CCCeE-EEEecCcCCCccceECCCCCEEEEccCC
Confidence 54432 2332222345689999999988765433
No 414
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.67 E-value=3.5 Score=37.83 Aligned_cols=117 Identities=15% Similarity=0.253 Sum_probs=83.6
Q ss_pred CccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeecc-CCeEEEEecCCCEEEEEe-CCCeEEEEEcCCCcc
Q 010754 313 KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS-GPTLDVDWRNNVSFATSS-TDNMIYVCKIGENRP 390 (502)
Q Consensus 313 ~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~-~~v~~v~~~~~~~~~~~~-~d~~i~i~d~~~~~~ 390 (502)
+-...+.++.|+|+.+.|++......-.+|=...|+.++++.... ...-.|.|..++.|+.+. .++.++++.+.....
T Consensus 83 g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t~ 162 (316)
T COG3204 83 GETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADTT 162 (316)
T ss_pred cccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCcc
Confidence 444559999999999999988888877787777899888876432 234567787778777665 467788777765532
Q ss_pred eE----------EEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 010754 391 IK----------TFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ 429 (502)
Q Consensus 391 ~~----------~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~ 429 (502)
+. .....+...-.++|+|....|..+-+-.-+.||.+..
T Consensus 163 ~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~ 211 (316)
T COG3204 163 VISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQ 211 (316)
T ss_pred EEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEec
Confidence 21 1111245677899999999998888877777776653
No 415
>PHA03098 kelch-like protein; Provisional
Probab=94.64 E-value=1.2 Score=46.06 Aligned_cols=145 Identities=8% Similarity=0.088 Sum_probs=73.3
Q ss_pred CCCEEEEEECC-----CeEEEEECCCceEEEecCccCCe--EEEEEecCCCEEEEEecC------CeEEEEEcCCCceEE
Q 010754 285 EGTLLATGSYD-----GQARIWSTNGDLKCTLSKHKGPI--FSLKWNKKGDYLLTGSCD------KTAIVWDVKTEEWKQ 351 (502)
Q Consensus 285 ~g~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~v--~~l~~~~~~~~l~s~~~d------~~i~~wd~~~~~~~~ 351 (502)
++.+++.||.+ ..+..||..............+. .+++. -++...+.|+.+ +.+..||..+.++..
T Consensus 342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~~~~~~-~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~ 420 (534)
T PHA03098 342 NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYNPCVVN-VNNLIYVIGGISKNDELLKTVECFSLNTNKWSK 420 (534)
T ss_pred CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCccceEEE-ECCEEEEECCcCCCCcccceEEEEeCCCCeeee
Confidence 56777888765 34677887654433332211111 11222 245666666632 468899988876654
Q ss_pred EEeeccC-CeEEEEecCCCEEEEEeCC--------CeEEEEEcCCCcce--EEEecCCCcEEEEEEcCCCCEEEEEeCC-
Q 010754 352 QFEFHSG-PTLDVDWRNNVSFATSSTD--------NMIYVCKIGENRPI--KTFAGHQGEVNCVKWDPTGSLLASCSDD- 419 (502)
Q Consensus 352 ~~~~~~~-~v~~v~~~~~~~~~~~~~d--------~~i~i~d~~~~~~~--~~~~~h~~~i~~l~~sp~g~~las~s~d- 419 (502)
.-..... .-.++....+..++.|+.+ ..+.+||..+++-. ..+.........+.+ ++++++.|+.+
T Consensus 421 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~ 498 (534)
T PHA03098 421 GSPLPISHYGGCAIYHDGKIYVIGGISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCIF--NNKIYVVGGDKY 498 (534)
T ss_pred cCCCCccccCceEEEECCEEEEECCccCCCCCcccceEEEecCCCCceeeCCCCCcccccceEEEE--CCEEEEEcCCcC
Confidence 2211100 1112333445556666542 23788888765422 111111111122222 56777777654
Q ss_pred ----CcEEEEECCCCee
Q 010754 420 ----VTAKIWNMKQDKY 432 (502)
Q Consensus 420 ----g~i~iwd~~~~~~ 432 (502)
+.|.+||..+.+.
T Consensus 499 ~~~~~~v~~yd~~~~~W 515 (534)
T PHA03098 499 EYYINEIEVYDDKTNTW 515 (534)
T ss_pred CcccceeEEEeCCCCEE
Confidence 4678888776553
No 416
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=94.62 E-value=2.4 Score=43.98 Aligned_cols=146 Identities=14% Similarity=0.184 Sum_probs=78.9
Q ss_pred CCCEEEEEECC-C-----eEEEEECCCceEEEecCccCCeEEEEEe-cCCCEEEEEecCC-----eEEEEEcCCCceEEE
Q 010754 285 EGTLLATGSYD-G-----QARIWSTNGDLKCTLSKHKGPIFSLKWN-KKGDYLLTGSCDK-----TAIVWDVKTEEWKQQ 352 (502)
Q Consensus 285 ~g~~l~s~~~d-g-----~i~iwd~~~~~~~~~~~~~~~v~~l~~~-~~~~~l~s~~~d~-----~i~~wd~~~~~~~~~ 352 (502)
+|.+.++|+.| | .+..||..............+-..+... -+|...++|+.|| +|-.||..+.++...
T Consensus 332 ~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~v 411 (571)
T KOG4441|consen 332 NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPV 411 (571)
T ss_pred CCEEEEEccccCCCcccceEEEecCCCCceeccCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCccccc
Confidence 45788888888 3 5667787655444333322222222221 2567788888886 477888877665332
Q ss_pred Eeec-cCCeEEEEecCCCEEEEEeCCC------eEEEEEcCCCcc--eEEEecCCCcEEEEEEcCCCCEEEEEeCCCc--
Q 010754 353 FEFH-SGPTLDVDWRNNVSFATSSTDN------MIYVCKIGENRP--IKTFAGHQGEVNCVKWDPTGSLLASCSDDVT-- 421 (502)
Q Consensus 353 ~~~~-~~~v~~v~~~~~~~~~~~~~d~------~i~i~d~~~~~~--~~~~~~h~~~i~~l~~sp~g~~las~s~dg~-- 421 (502)
-... ...-..++-..+..+++||.++ .+..||..++.- +..+..-..... ++. -++.+.+.|+.|+.
T Consensus 412 a~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g-~a~-~~~~iYvvGG~~~~~~ 489 (571)
T KOG4441|consen 412 APMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFG-VAV-LNGKIYVVGGFDGTSA 489 (571)
T ss_pred CCCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccce-EEE-ECCEEEEECCccCCCc
Confidence 2111 1112233334566677777544 467788776642 111211111111 222 25778888887763
Q ss_pred ---EEEEECCCCee
Q 010754 422 ---AKIWNMKQDKY 432 (502)
Q Consensus 422 ---i~iwd~~~~~~ 432 (502)
|..||..+.+.
T Consensus 490 ~~~VE~ydp~~~~W 503 (571)
T KOG4441|consen 490 LSSVERYDPETNQW 503 (571)
T ss_pred cceEEEEcCCCCce
Confidence 66777766554
No 417
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=94.57 E-value=0.87 Score=48.20 Aligned_cols=92 Identities=16% Similarity=0.194 Sum_probs=50.0
Q ss_pred CCeEEEEEecCCCEEEEEecCCeEEEEEcCC-CceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEE
Q 010754 316 GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT-EEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTF 394 (502)
Q Consensus 316 ~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~ 394 (502)
-.|..|.++|+|.+++..|..|. .|..+.. ......+......+.|-. +.+... +. .
T Consensus 85 f~v~~i~~n~~g~~lal~G~~~v-~V~~LP~r~g~~~~~~~g~~~i~Crt------------------~~v~~~--~~-~ 142 (717)
T PF10168_consen 85 FEVHQISLNPTGSLLALVGPRGV-VVLELPRRWGKNGEFEDGKKEINCRT------------------VPVDER--FF-T 142 (717)
T ss_pred eeEEEEEECCCCCEEEEEcCCcE-EEEEeccccCccccccCCCcceeEEE------------------EEechh--hc-c
Confidence 35788889999999888877554 4444421 111111221111121111 111110 00 1
Q ss_pred ecCCCcEEEEEEcCC---CCEEEEEeCCCcEEEEECCC
Q 010754 395 AGHQGEVNCVKWDPT---GSLLASCSDDVTAKIWNMKQ 429 (502)
Q Consensus 395 ~~h~~~i~~l~~sp~---g~~las~s~dg~i~iwd~~~ 429 (502)
..+...|..+.|+|. +..|+.-..|+++|+||+..
T Consensus 143 ~~~~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~ 180 (717)
T PF10168_consen 143 SNSSLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISD 180 (717)
T ss_pred CCCCceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCC
Confidence 123456778888886 46777778888888888754
No 418
>PRK10115 protease 2; Provisional
Probab=94.52 E-value=7.9 Score=41.31 Aligned_cols=192 Identities=9% Similarity=0.074 Sum_probs=100.6
Q ss_pred CceEEEEEcCCCCeEEEEeCC-----CcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEE
Q 010754 216 SEVCACAWSPAGSLLASGSGD-----STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA 290 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~d-----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~ 290 (502)
-.+..+.|+|++++|+.+... ..|++-|+.++..+... + ...-..++|.+|++.|+
T Consensus 127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~------------i-------~~~~~~~~w~~D~~~~~ 187 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPEL------------L-------DNVEPSFVWANDSWTFY 187 (686)
T ss_pred EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCcc------------c-------cCcceEEEEeeCCCEEE
Confidence 456778999999988876432 35778888766421100 0 01114589999998776
Q ss_pred EEECC------CeEEEEECCCc---eEEEecCccCCeE-EEEEecCCCEEEEEec---CCeEEEEEc--CCCceEEEEee
Q 010754 291 TGSYD------GQARIWSTNGD---LKCTLSKHKGPIF-SLKWNKKGDYLLTGSC---DKTAIVWDV--KTEEWKQQFEF 355 (502)
Q Consensus 291 s~~~d------g~i~iwd~~~~---~~~~~~~~~~~v~-~l~~~~~~~~l~s~~~---d~~i~~wd~--~~~~~~~~~~~ 355 (502)
....+ ..|..+++.+. ....+........ .+..+.++++++..+. ++.+.+|+. ..+.....+..
T Consensus 188 y~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 267 (686)
T PRK10115 188 YVRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPR 267 (686)
T ss_pred EEEecCCCCCCCEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEEC
Confidence 66543 35667776543 2233333333333 2233447777665433 457888884 23443222322
Q ss_pred ccCCeEEEEecCCCEEEEEeC----CCeEEEEEcCCCcceEEEecC-C-CcEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 010754 356 HSGPTLDVDWRNNVSFATSST----DNMIYVCKIGENRPIKTFAGH-Q-GEVNCVKWDPTGSLLASCSDDVTAKIWNMK 428 (502)
Q Consensus 356 ~~~~v~~v~~~~~~~~~~~~~----d~~i~i~d~~~~~~~~~~~~h-~-~~i~~l~~sp~g~~las~s~dg~i~iwd~~ 428 (502)
.......+. ..+..|...+. ...|...++........+..+ . ..|..+.+. .+.++++...+|.-+++-+.
T Consensus 268 ~~~~~~~~~-~~~~~ly~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~-~~~l~~~~~~~g~~~l~~~~ 344 (686)
T PRK10115 268 RKDHEYSLD-HYQHRFYLRSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLF-TDWLVVEERQRGLTSLRQIN 344 (686)
T ss_pred CCCCEEEEE-eCCCEEEEEEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEE-CCEEEEEEEeCCEEEEEEEc
Confidence 223333333 22334333332 223444455422222344445 3 368888887 34566677777765555443
No 419
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=94.29 E-value=6 Score=40.67 Aligned_cols=151 Identities=8% Similarity=0.014 Sum_probs=88.1
Q ss_pred CCEEEEEECCCeEEEEECC-CceEEEecCcc-CCeE----------EEEEecCCCEEEEEecCCeEEEEEcCCCceEEEE
Q 010754 286 GTLLATGSYDGQARIWSTN-GDLKCTLSKHK-GPIF----------SLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 353 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~-~~v~----------~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~ 353 (502)
+..+++++.++.|.-+|.. ++.+..+.... ..+. .+.+ .+..++.++.|+.+.-.|..+|+.+..+
T Consensus 69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av--~~~~v~v~t~dg~l~ALDa~TGk~~W~~ 146 (527)
T TIGR03075 69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVAL--YDGKVFFGTLDARLVALDAKTGKVVWSK 146 (527)
T ss_pred CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceE--ECCEEEEEcCCCEEEEEECCCCCEEeec
Confidence 3466667777778877865 44444433211 1111 1122 2356778889999999999999988766
Q ss_pred eeccC----CeEEEEecCCCEEEEEeC------CCeEEEEEcCCCcceEEEecCC-------------------------
Q 010754 354 EFHSG----PTLDVDWRNNVSFATSST------DNMIYVCKIGENRPIKTFAGHQ------------------------- 398 (502)
Q Consensus 354 ~~~~~----~v~~v~~~~~~~~~~~~~------d~~i~i~d~~~~~~~~~~~~h~------------------------- 398 (502)
..... .+.+--...++.++++.. +|.|+.+|..+++.+..+..-.
T Consensus 147 ~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~~ 226 (527)
T TIGR03075 147 KNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPGD 226 (527)
T ss_pred ccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCCCC
Confidence 53211 111100011445555542 6899999999998776543211
Q ss_pred ------CcEE-EEEEcCCCCEEEEEeCC-----C-----------cEEEEECCCCeeEEEecc
Q 010754 399 ------GEVN-CVKWDPTGSLLASCSDD-----V-----------TAKIWNMKQDKYVHDLRE 438 (502)
Q Consensus 399 ------~~i~-~l~~sp~g~~las~s~d-----g-----------~i~iwd~~~~~~~~~~~~ 438 (502)
+.+. .++++|...+|..+..+ + +|.--|++||+....++.
T Consensus 227 ~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~ 289 (527)
T TIGR03075 227 AWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQT 289 (527)
T ss_pred ccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeC
Confidence 0111 24677766666665522 2 566778889998877764
No 420
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=94.26 E-value=7.9 Score=41.20 Aligned_cols=88 Identities=19% Similarity=0.236 Sum_probs=57.1
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCC-CccCCCCCCCceeEEEeeec---CccccCCCCeEEEEECCC---CCE
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADG-TSNGGAQNGPLNVLVLKHVK---GRTNEKSKDVTTLDWNGE---GTL 288 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~l~~s~~---g~~ 288 (502)
-.|..+..||+|++||..|..| |.|-.+... .....+..+...+.+..... .........|..+.|+|. +..
T Consensus 85 f~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~ 163 (717)
T PF10168_consen 85 FEVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSH 163 (717)
T ss_pred eeEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCe
Confidence 4588999999999999988854 666666542 11112222222222211111 122344567999999996 579
Q ss_pred EEEEECCCeEEEEECC
Q 010754 289 LATGSYDGQARIWSTN 304 (502)
Q Consensus 289 l~s~~~dg~i~iwd~~ 304 (502)
|++-+.|+.+|+||+.
T Consensus 164 l~vLtsdn~lR~y~~~ 179 (717)
T PF10168_consen 164 LVVLTSDNTLRLYDIS 179 (717)
T ss_pred EEEEecCCEEEEEecC
Confidence 9999999999999975
No 421
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=94.16 E-value=4.7 Score=37.28 Aligned_cols=231 Identities=16% Similarity=0.195 Sum_probs=128.8
Q ss_pred ceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC---------
Q 010754 217 EVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT--------- 287 (502)
Q Consensus 217 ~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~--------- 287 (502)
.-+.|+++|.+.+-++...-+...+||......... + ..+........-.......+.+.|+....
T Consensus 24 N~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~----~-~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~ 98 (336)
T TIGR03118 24 NAWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLV----Q-DPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGIT 98 (336)
T ss_pred ccceeEecCCCCEEEecCCcceEEeecCCcccccCC----c-cceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcc
Confidence 347899999998888888889999999863221100 0 01111111111111234577777775333
Q ss_pred ---EEEEEECCCeEEEEECCC--c----eEEEecC-ccCCe-EEEEEec--CCCEEEEEe-cCCeEEEEEcCCCceEE--
Q 010754 288 ---LLATGSYDGQARIWSTNG--D----LKCTLSK-HKGPI-FSLKWNK--KGDYLLTGS-CDKTAIVWDVKTEEWKQ-- 351 (502)
Q Consensus 288 ---~l~s~~~dg~i~iwd~~~--~----~~~~~~~-~~~~v-~~l~~~~--~~~~l~s~~-~d~~i~~wd~~~~~~~~-- 351 (502)
.++.+++||+|.-|...- . ....+.. ..+.| ..+++.. .+++|+.+. ..++|-+||-.-.....
T Consensus 99 ~~a~Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g 178 (336)
T TIGR03118 99 GPSRFLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPG 178 (336)
T ss_pred cceeEEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCC
Confidence 367789999999998431 1 1122221 12333 3455543 356676655 46789999853222110
Q ss_pred EEeecc-------------CCeEEEEec---C-CCEEEEEeCCCeEEEEEcCCCcceEEEe--cCCCcEEEEEEcC----
Q 010754 352 QFEFHS-------------GPTLDVDWR---N-NVSFATSSTDNMIYVCKIGENRPIKTFA--GHQGEVNCVKWDP---- 408 (502)
Q Consensus 352 ~~~~~~-------------~~v~~v~~~---~-~~~~~~~~~d~~i~i~d~~~~~~~~~~~--~h~~~i~~l~~sp---- 408 (502)
.|.... +.-.-|.|. + ...=+.+..-|.|-+||.. +..++++. +.-...+.|+..|
T Consensus 179 ~F~DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~-G~l~~r~as~g~LNaPWG~a~APa~FG 257 (336)
T TIGR03118 179 SFIDPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLN-GQLLRRVASSGRLNAPWGLAIAPESFG 257 (336)
T ss_pred CccCCCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCC-CcEEEEeccCCcccCCceeeeChhhhC
Confidence 010000 001111220 0 1112333445788888875 45566563 2233456677765
Q ss_pred --CCCEEEEEeCCCcEEEEECCCCeeEEEeccCCC------cEEEEEEccCCC
Q 010754 409 --TGSLLASCSDDVTAKIWNMKQDKYVHDLREHSK------EIYTIRWSPTGS 453 (502)
Q Consensus 409 --~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~------~i~~v~~sp~g~ 453 (502)
.|.+|+---.||+|..+|..+++.+-.+....+ .++.|+|....+
T Consensus 258 ~~sg~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~pi~i~GLWgL~fGng~~ 310 (336)
T TIGR03118 258 SLSGALLVGNFGDGTINAYDPQSGAQLGQLLDPDNHPVKVDGLWSLTFGNGVS 310 (336)
T ss_pred CCCCCeEEeecCCceeEEecCCCCceeeeecCCCCCeEEecCeEEeeeCCCcC
Confidence 467777666799999999999998877764332 368888887544
No 422
>KOG2247 consensus WD40 repeat-containing protein [General function prediction only]
Probab=94.06 E-value=0.0052 Score=59.04 Aligned_cols=142 Identities=19% Similarity=0.301 Sum_probs=97.5
Q ss_pred CeEEEEECCCCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEE-EEecCCeEEEEEcCCCceEEEEe
Q 010754 276 DVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLL-TGSCDKTAIVWDVKTEEWKQQFE 354 (502)
Q Consensus 276 ~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-s~~~d~~i~~wd~~~~~~~~~~~ 354 (502)
......|-+.+.-++.++.+..+..||-.+....... .++....++|..++..++ .+-..+.+.+||+.+....+.-.
T Consensus 36 ~pi~~~w~~e~~nlavaca~tiv~~YD~agq~~le~n-~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE~ 114 (615)
T KOG2247|consen 36 GPIIHRWRPEGHNLAVACANTIVIYYDKAGQVILELN-PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLES 114 (615)
T ss_pred ccceeeEecCCCceehhhhhhHHHhhhhhcceecccC-CchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHhc
Confidence 3445678887777888998999999997776655443 345567889998887655 45667899999997643221111
Q ss_pred eccCCeEEEEecCCCE-EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCC
Q 010754 355 FHSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD 419 (502)
Q Consensus 355 ~~~~~v~~v~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~d 419 (502)
+....-.-+.|+++.. ++.+...+.+.||+.++.+.+.....|...+++++|.+.+. .+.++.|
T Consensus 115 gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~-vil~dcd 179 (615)
T KOG2247|consen 115 GGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDY-VILCDCD 179 (615)
T ss_pred cCcchHHHHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccce-eeecCcH
Confidence 1111112256766544 56667889999999998887766666999999999998764 3444444
No 423
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=94.02 E-value=2.4 Score=43.84 Aligned_cols=109 Identities=13% Similarity=0.248 Sum_probs=70.8
Q ss_pred CeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEe-eccCCeEEEEec---CCCEEEEEeCCCeEEEEEcC-----C
Q 010754 317 PIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFE-FHSGPTLDVDWR---NNVSFATSSTDNMIYVCKIG-----E 387 (502)
Q Consensus 317 ~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~-~~~~~v~~v~~~---~~~~~~~~~~d~~i~i~d~~-----~ 387 (502)
...-+.-+.-++..++-+...++.|||.+.+.....-. ...+.|.+++|. .+..+++.|..+.|.+|--. .
T Consensus 31 ~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~ 110 (631)
T PF12234_consen 31 NPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTN 110 (631)
T ss_pred CcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhc
Confidence 34444445555555555555689999999887544433 346789999993 24557778888888887542 1
Q ss_pred C----cceEEE--ecCC-CcEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 010754 388 N----RPIKTF--AGHQ-GEVNCVKWDPTGSLLASCSDDVTAKIWNM 427 (502)
Q Consensus 388 ~----~~~~~~--~~h~-~~i~~l~~sp~g~~las~s~dg~i~iwd~ 427 (502)
. .+++.+ ..|+ .+|....|.++|.+++.++ +.+.|+|-
T Consensus 111 ~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk 155 (631)
T PF12234_consen 111 KGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDK 155 (631)
T ss_pred CCcccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEECC
Confidence 1 234433 3344 5799999999997776554 35788873
No 424
>PHA02790 Kelch-like protein; Provisional
Probab=93.94 E-value=2.9 Score=42.53 Aligned_cols=142 Identities=10% Similarity=0.003 Sum_probs=70.7
Q ss_pred CCCEEEEEECC--CeEEEEECCCceEEEecCccCCeE--EEEEecCCCEEEEEecCC---eEEEEEcCCCceEEEEeecc
Q 010754 285 EGTLLATGSYD--GQARIWSTNGDLKCTLSKHKGPIF--SLKWNKKGDYLLTGSCDK---TAIVWDVKTEEWKQQFEFHS 357 (502)
Q Consensus 285 ~g~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~v~--~l~~~~~~~~l~s~~~d~---~i~~wd~~~~~~~~~~~~~~ 357 (502)
+|.+.+.|+.+ ..+..||..............+.. +++ .-+|+..+.|+.++ .+..||..+.++...-....
T Consensus 318 ~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~~~~~~-~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~ 396 (480)
T PHA02790 318 NNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRCNPAVA-SINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYY 396 (480)
T ss_pred CCEEEEECCcCCCCceEEEECCCCeEEECCCCCCCCcccEEE-EECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCC
Confidence 57777777764 357778865544333332222221 122 22566666776543 47788988776654211110
Q ss_pred C-CeEEEEecCCCEEEEEeCCCeEEEEEcCCCcc--eEEEecCCCcEEEEEEcCCCCEEEEEeCC-----CcEEEEECCC
Q 010754 358 G-PTLDVDWRNNVSFATSSTDNMIYVCKIGENRP--IKTFAGHQGEVNCVKWDPTGSLLASCSDD-----VTAKIWNMKQ 429 (502)
Q Consensus 358 ~-~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~--~~~~~~h~~~i~~l~~sp~g~~las~s~d-----g~i~iwd~~~ 429 (502)
. .-.++.-..+..++.| |.+.+||..+++- +..+.........+.+ +|++.+.|+.+ .++.+||..+
T Consensus 397 ~r~~~~~~~~~~~IYv~G---G~~e~ydp~~~~W~~~~~m~~~r~~~~~~v~--~~~IYviGG~~~~~~~~~ve~Yd~~~ 471 (480)
T PHA02790 397 PHYKSCALVFGRRLFLVG---RNAEFYCESSNTWTLIDDPIYPRDNPELIIV--DNKLLLIGGFYRGSYIDTIEVYNNRT 471 (480)
T ss_pred ccccceEEEECCEEEEEC---CceEEecCCCCcEeEcCCCCCCccccEEEEE--CCEEEEECCcCCCcccceEEEEECCC
Confidence 0 0112222334445555 3467788776542 2222211122222222 57777777754 3466777666
Q ss_pred Cee
Q 010754 430 DKY 432 (502)
Q Consensus 430 ~~~ 432 (502)
++.
T Consensus 472 ~~W 474 (480)
T PHA02790 472 YSW 474 (480)
T ss_pred CeE
Confidence 543
No 425
>KOG3616 consensus Selective LIM binding factor [Transcription]
Probab=93.90 E-value=1.1 Score=46.04 Aligned_cols=33 Identities=12% Similarity=0.144 Sum_probs=27.8
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCC
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGT 248 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~ 248 (502)
..++++.-+|.|.-+++++.||+|++|++....
T Consensus 15 e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~ 47 (1636)
T KOG3616|consen 15 EFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRR 47 (1636)
T ss_pred ceeeeeeecCCCceEEEEecCCcEEEEeecccc
Confidence 346678888999999999999999999987644
No 426
>PHA02713 hypothetical protein; Provisional
Probab=93.51 E-value=2.5 Score=43.85 Aligned_cols=142 Identities=11% Similarity=0.145 Sum_probs=71.4
Q ss_pred CCCEEEEEECC------CeEEEEECCCceEEEecCccCCe--EEEEEecCCCEEEEEecCC-----eEEEEEcCCCceEE
Q 010754 285 EGTLLATGSYD------GQARIWSTNGDLKCTLSKHKGPI--FSLKWNKKGDYLLTGSCDK-----TAIVWDVKTEEWKQ 351 (502)
Q Consensus 285 ~g~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~v--~~l~~~~~~~~l~s~~~d~-----~i~~wd~~~~~~~~ 351 (502)
++.+++.||.+ ..+..||..............+. .+++ .-+|+..+.|+.++ ++..||..+.++..
T Consensus 303 ~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~~~~-~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~ 381 (557)
T PHA02713 303 DNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRFSLA-VIDDTIYAIGGQNGTNVERTIECYTMGDDKWKM 381 (557)
T ss_pred CCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhceeEE-EECCEEEEECCcCCCCCCceEEEEECCCCeEEE
Confidence 56677777754 34677887665444333222111 1222 22566677777654 48889988876644
Q ss_pred EEeeccC-CeEEEEecCCCEEEEEeCC-----------------------CeEEEEEcCCCcc--eEEEecCCCcEEEEE
Q 010754 352 QFEFHSG-PTLDVDWRNNVSFATSSTD-----------------------NMIYVCKIGENRP--IKTFAGHQGEVNCVK 405 (502)
Q Consensus 352 ~~~~~~~-~v~~v~~~~~~~~~~~~~d-----------------------~~i~i~d~~~~~~--~~~~~~h~~~i~~l~ 405 (502)
.-..... .-.++.-..+..++.|+.+ ..+..||..+++- +..+....... +++
T Consensus 382 ~~~mp~~r~~~~~~~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~~v~~m~~~r~~~-~~~ 460 (557)
T PHA02713 382 LPDMPIALSSYGMCVLDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETLPNFWTGTIRP-GVV 460 (557)
T ss_pred CCCCCcccccccEEEECCEEEEEeCCCcccccccccccccccccccccccceEEEECCCCCeEeecCCCCcccccC-cEE
Confidence 2111110 1112222345556667654 2466777766532 11121111111 122
Q ss_pred EcCCCCEEEEEeCC------CcEEEEECCC
Q 010754 406 WDPTGSLLASCSDD------VTAKIWNMKQ 429 (502)
Q Consensus 406 ~sp~g~~las~s~d------g~i~iwd~~~ 429 (502)
.-+|++.+.|+.+ ..+..||..+
T Consensus 461 -~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~ 489 (557)
T PHA02713 461 -SHKDDIYVVCDIKDEKNVKTCIFRYNTNT 489 (557)
T ss_pred -EECCEEEEEeCCCCCCccceeEEEecCCC
Confidence 2246666777654 2367788776
No 427
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=93.42 E-value=1.8 Score=42.48 Aligned_cols=150 Identities=13% Similarity=0.160 Sum_probs=93.9
Q ss_pred cCCCEEE-EEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCC--------EEEEEeCCCeEEEEEcCCCc-ceEEE
Q 010754 325 KKGDYLL-TGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV--------SFATSSTDNMIYVCKIGENR-PIKTF 394 (502)
Q Consensus 325 ~~~~~l~-s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~--------~~~~~~~d~~i~i~d~~~~~-~~~~~ 394 (502)
.+.+.|+ .|+....++-.|+..|+.+.....+... -+.|.|.. .-++|-.+..|.-.|.+-.. .+..-
T Consensus 477 ~dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~ 554 (776)
T COG5167 477 NDSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVV 554 (776)
T ss_pred CCcceEEecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEecccccCCceeee
Confidence 3444444 4666678888899999999988877765 34554432 23455566666666655332 22211
Q ss_pred ecCCC-----cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecC
Q 010754 395 AGHQG-----EVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIP 469 (502)
Q Consensus 395 ~~h~~-----~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~ 469 (502)
. ... ..++..-. ...++|.+|..|.|++||--.-+.-..+.+....|..|..+.+|. .++|+.-.
T Consensus 555 e-sKdY~tKn~Fss~~tT-esGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk--------~ilaTCk~ 624 (776)
T COG5167 555 E-SKDYKTKNKFSSGMTT-ESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGK--------HILATCKN 624 (776)
T ss_pred e-ehhccccccccccccc-cCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCc--------EEEEeecc
Confidence 1 112 23333322 345899999999999999543333345566777899999999986 68888888
Q ss_pred ceEEEEeeeEE-Eeeecc
Q 010754 470 YFLYWICSIYF-KYFGTT 486 (502)
Q Consensus 470 ~~~iw~~~~~~-~~~g~~ 486 (502)
.+.+-...+.+ .+.|..
T Consensus 625 yllL~d~~ik~g~~aGr~ 642 (776)
T COG5167 625 YLLLTDVPIKYGQPAGRD 642 (776)
T ss_pred eEEEEecccccCCccccc
Confidence 77777665543 334443
No 428
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=93.37 E-value=5.1 Score=40.67 Aligned_cols=143 Identities=17% Similarity=0.208 Sum_probs=73.6
Q ss_pred CCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCC---eEEEEecCC-C
Q 010754 294 YDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP---TLDVDWRNN-V 369 (502)
Q Consensus 294 ~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~---v~~v~~~~~-~ 369 (502)
..+...++|.+|..+..+.........+...++|.+++... ..++.+|+. |+.+..+...... -.++...++ +
T Consensus 126 ~~~~~~~iD~~G~Vrw~~~~~~~~~~~~~~l~nG~ll~~~~--~~~~e~D~~-G~v~~~~~l~~~~~~~HHD~~~l~nGn 202 (477)
T PF05935_consen 126 SSSYTYLIDNNGDVRWYLPLDSGSDNSFKQLPNGNLLIGSG--NRLYEIDLL-GKVIWEYDLPGGYYDFHHDIDELPNGN 202 (477)
T ss_dssp BEEEEEEEETTS-EEEEE-GGGT--SSEEE-TTS-EEEEEB--TEEEEE-TT---EEEEEE--TTEE-B-S-EEE-TTS-
T ss_pred CCceEEEECCCccEEEEEccCccccceeeEcCCCCEEEecC--CceEEEcCC-CCEEEeeecCCcccccccccEECCCCC
Confidence 45677888888887776654444333366778988777655 788888874 6655555433221 233444444 3
Q ss_pred EEEEEeC-------------CCeEEEEEcCCCcceEEEec--C-----------------------C--CcEEEEEEcC-
Q 010754 370 SFATSST-------------DNMIYVCKIGENRPIKTFAG--H-----------------------Q--GEVNCVKWDP- 408 (502)
Q Consensus 370 ~~~~~~~-------------d~~i~i~d~~~~~~~~~~~~--h-----------------------~--~~i~~l~~sp- 408 (502)
.++.+.. ...|..+| .+++.+..+.. | . -.++++.+.+
T Consensus 203 ~L~l~~~~~~~~~~~~~~~~~D~Ivevd-~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW~H~Nsi~yd~~ 281 (477)
T PF05935_consen 203 LLILASETKYVDEDKDVDTVEDVIVEVD-PTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDWLHINSIDYDPS 281 (477)
T ss_dssp EEEEEEETTEE-TS-EE---S-EEEEE--TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS--EEEEEEETT
T ss_pred EEEEEeecccccCCCCccEecCEEEEEC-CCCCEEEEEehHHhCCcccccccccccccccccCCCCCCccccCccEEeCC
Confidence 3333331 22344455 55544433210 0 0 2489999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeeEEEeccCC
Q 010754 409 TGSLLASCSDDVTAKIWNMKQDKYVHDLREHS 440 (502)
Q Consensus 409 ~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~ 440 (502)
++.+|+|+-.-..|...|.++++....+-.+.
T Consensus 282 dd~iivSsR~~s~V~~Id~~t~~i~Wilg~~~ 313 (477)
T PF05935_consen 282 DDSIIVSSRHQSAVIKIDYRTGKIKWILGPPG 313 (477)
T ss_dssp TTEEEEEETTT-EEEEEE-TTS-EEEEES-ST
T ss_pred CCeEEEEcCcceEEEEEECCCCcEEEEeCCCC
Confidence 66667777666789999988888877776543
No 429
>KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=93.19 E-value=3.7 Score=40.63 Aligned_cols=95 Identities=14% Similarity=0.108 Sum_probs=51.5
Q ss_pred CeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEec
Q 010754 317 PIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAG 396 (502)
Q Consensus 317 ~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~ 396 (502)
.|..+..++.|..++.++.+|.+.++=.+....-..+......|.|-.+.-+..|++.+
T Consensus 105 eV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss--------------------- 163 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSS--------------------- 163 (741)
T ss_pred EEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccC---------------------
Confidence 46777788999998888888877665322222222222222223332222222222211
Q ss_pred CCCcEEEEEEcCCC---CEEEEEeCCCcEEEEECCCCee
Q 010754 397 HQGEVNCVKWDPTG---SLLASCSDDVTAKIWNMKQDKY 432 (502)
Q Consensus 397 h~~~i~~l~~sp~g---~~las~s~dg~i~iwd~~~~~~ 432 (502)
..-.+..++|+|+. ..|..-+.|.+|||||....+.
T Consensus 164 ~~ltl~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~te 202 (741)
T KOG4460|consen 164 TSLTLKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEPTE 202 (741)
T ss_pred CceeeeeccccCCccCCceEEEEecCcEEEEEecCCcch
Confidence 11234566788764 4566667788888888765443
No 430
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=93.17 E-value=3.4 Score=35.84 Aligned_cols=172 Identities=16% Similarity=0.140 Sum_probs=92.9
Q ss_pred CCCeEEEEeC--CCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEE-EEEECCCeEEEEE
Q 010754 226 AGSLLASGSG--DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL-ATGSYDGQARIWS 302 (502)
Q Consensus 226 ~~~~l~sgs~--dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l-~s~~~dg~i~iwd 302 (502)
+|.++.+.+. .+.|++||+.+++.+......+ .......++.+ |..+ +..-.+|.-.++|
T Consensus 55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~------------~~~FgEGit~~-----gd~~y~LTw~egvaf~~d 117 (262)
T COG3823 55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAP------------DTVFGEGITKL-----GDYFYQLTWKEGVAFKYD 117 (262)
T ss_pred CCEEEEeccccccceeEEEeccCceEEEEeecCC------------ccccccceeec-----cceEEEEEeccceeEEEC
Confidence 4566666654 4579999999876432111100 00001112221 2222 2223457777777
Q ss_pred CCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEee--ccC---CeEEEEecCCCEEEEEeCC
Q 010754 303 TNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF--HSG---PTLDVDWRNNVSFATSSTD 377 (502)
Q Consensus 303 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~--~~~---~v~~v~~~~~~~~~~~~~d 377 (502)
.+.-.........+.=+.++. ++..|+.++...+++.-|..+.....++.. ... .+..+.|..+..++-.-..
T Consensus 118 ~~t~~~lg~~~y~GeGWgLt~--d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~VdG~lyANVw~t 195 (262)
T COG3823 118 ADTLEELGRFSYEGEGWGLTS--DDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWVDGELYANVWQT 195 (262)
T ss_pred hHHhhhhcccccCCcceeeec--CCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeeeccEEEEeeeee
Confidence 654222222223344466653 455577666666777777665544433332 122 2455667777666666666
Q ss_pred CeEEEEEcCCCcceEEEe------------cCCCcEEEEEEcCCC-CEEEEE
Q 010754 378 NMIYVCKIGENRPIKTFA------------GHQGEVNCVKWDPTG-SLLASC 416 (502)
Q Consensus 378 ~~i~i~d~~~~~~~~~~~------------~h~~~i~~l~~sp~g-~~las~ 416 (502)
..|...+..+++.+..+. .|.+-.+.|++.|++ +++++|
T Consensus 196 ~~I~rI~p~sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG 247 (262)
T COG3823 196 TRIARIDPDSGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG 247 (262)
T ss_pred cceEEEcCCCCcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEec
Confidence 667677777777665543 234567889999987 556665
No 431
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=93.14 E-value=9.6 Score=37.61 Aligned_cols=142 Identities=15% Similarity=0.129 Sum_probs=82.9
Q ss_pred CCCEEEEEECCCeEEEEECCCce-----EEEecCccCCeEEEEEec----CCCEEEEEecCCeEEEEEcCC--Cc-----
Q 010754 285 EGTLLATGSYDGQARIWSTNGDL-----KCTLSKHKGPIFSLKWNK----KGDYLLTGSCDKTAIVWDVKT--EE----- 348 (502)
Q Consensus 285 ~g~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~~v~~l~~~~----~~~~l~s~~~d~~i~~wd~~~--~~----- 348 (502)
+...|++|+..|.++||+..... +..-..-..||..+..-+ .....++.-.-+.+.+|.+.. |.
T Consensus 36 ~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g~ 115 (418)
T PF14727_consen 36 GSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHGN 115 (418)
T ss_pred CccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccCc
Confidence 34689999999999999975321 222233457888887643 233444456778888888732 11
Q ss_pred --eEEEEeeccC--CeEEEEe---c--C-CCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeC
Q 010754 349 --WKQQFEFHSG--PTLDVDW---R--N-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD 418 (502)
Q Consensus 349 --~~~~~~~~~~--~v~~v~~---~--~-~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~ 418 (502)
.+..+..|.- ....+++ - . ...+.+-+.||.+.+|+-+.-.....+.. .--...+.|.+.-..|++++.
T Consensus 116 ~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~-~llPgPl~Y~~~tDsfvt~ss 194 (418)
T PF14727_consen 116 QYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPD-FLLPGPLCYCPRTDSFVTASS 194 (418)
T ss_pred EEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCC-CCCCcCeEEeecCCEEEEecC
Confidence 1122222221 2223332 1 1 35577889999999999765443333332 112224567777677777777
Q ss_pred CCcEEEEEC
Q 010754 419 DVTAKIWNM 427 (502)
Q Consensus 419 dg~i~iwd~ 427 (502)
+..|..|..
T Consensus 195 s~~l~~Yky 203 (418)
T PF14727_consen 195 SWTLECYKY 203 (418)
T ss_pred ceeEEEecH
Confidence 766666653
No 432
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=93.03 E-value=0.36 Score=30.03 Aligned_cols=31 Identities=29% Similarity=0.459 Sum_probs=26.5
Q ss_pred CceEEEEEcCC-C--CeEEEEeCCCcEEEEecCC
Q 010754 216 SEVCACAWSPA-G--SLLASGSGDSTARIWTIAD 246 (502)
Q Consensus 216 ~~V~~~~~~p~-~--~~l~sgs~dg~v~iw~~~~ 246 (502)
+.|.+|.|+|. + .+|+.+-.-|.|.|+|+.+
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 46899999985 4 5899888889999999885
No 433
>PHA03098 kelch-like protein; Provisional
Probab=93.02 E-value=4.2 Score=42.04 Aligned_cols=146 Identities=10% Similarity=0.101 Sum_probs=72.9
Q ss_pred CCCEEEEEECCC------eEEEEECCCceEEEecCccCC--eEEEEEecCCCEEEEEecC-----CeEEEEEcCCCceEE
Q 010754 285 EGTLLATGSYDG------QARIWSTNGDLKCTLSKHKGP--IFSLKWNKKGDYLLTGSCD-----KTAIVWDVKTEEWKQ 351 (502)
Q Consensus 285 ~g~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~~--v~~l~~~~~~~~l~s~~~d-----~~i~~wd~~~~~~~~ 351 (502)
++.+++.|+.++ .+..||........+.....+ -.+++ .-++..++.|+.+ ..+..||..+.++..
T Consensus 294 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~-~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 372 (534)
T PHA03098 294 NNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVT-VFNNRIYVIGGIYNSISLNTVESWKPGESKWRE 372 (534)
T ss_pred CCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEE-EECCEEEEEeCCCCCEecceEEEEcCCCCceee
Confidence 456677776542 467778765544443322111 11222 2256667777765 357788888776543
Q ss_pred EEeec-cCCeEEEEecCCCEEEEEeCC------CeEEEEEcCCCcce--EEEecCCCcEEEEEEcCCCCEEEEEeCC---
Q 010754 352 QFEFH-SGPTLDVDWRNNVSFATSSTD------NMIYVCKIGENRPI--KTFAGHQGEVNCVKWDPTGSLLASCSDD--- 419 (502)
Q Consensus 352 ~~~~~-~~~v~~v~~~~~~~~~~~~~d------~~i~i~d~~~~~~~--~~~~~h~~~i~~l~~sp~g~~las~s~d--- 419 (502)
.-... ...-.++....+..++.||.+ +.+..||..+++-. ..+....... +++ ..++.+++.|+.+
T Consensus 373 ~~~lp~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~-~~~-~~~~~iyv~GG~~~~~ 450 (534)
T PHA03098 373 EPPLIFPRYNPCVVNVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGG-CAI-YHDGKIYVIGGISYID 450 (534)
T ss_pred CCCcCcCCccceEEEECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCc-eEE-EECCEEEEECCccCCC
Confidence 21111 111122233455566666632 35788888765321 1111111111 122 2256666666643
Q ss_pred -----CcEEEEECCCCeeE
Q 010754 420 -----VTAKIWNMKQDKYV 433 (502)
Q Consensus 420 -----g~i~iwd~~~~~~~ 433 (502)
..+.+||..+++..
T Consensus 451 ~~~~~~~v~~yd~~~~~W~ 469 (534)
T PHA03098 451 NIKVYNIVESYNPVTNKWT 469 (534)
T ss_pred CCcccceEEEecCCCCcee
Confidence 13888888776543
No 434
>KOG2247 consensus WD40 repeat-containing protein [General function prediction only]
Probab=92.86 E-value=0.012 Score=56.62 Aligned_cols=134 Identities=14% Similarity=0.250 Sum_probs=93.9
Q ss_pred eEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCC--CEEEEEeCCCeEEEEEcCCCcceEEEe
Q 010754 318 IFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN--VSFATSSTDNMIYVCKIGENRPIKTFA 395 (502)
Q Consensus 318 v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~--~~~~~~~~d~~i~i~d~~~~~~~~~~~ 395 (502)
.....|-|.+..++.++.+..+..||- .++...... ..+...+++|.-+ ..++.+-..+.+++||+.+......=.
T Consensus 37 pi~~~w~~e~~nlavaca~tiv~~YD~-agq~~le~n-~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE~ 114 (615)
T KOG2247|consen 37 PIIHRWRPEGHNLAVACANTIVIYYDK-AGQVILELN-PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLES 114 (615)
T ss_pred cceeeEecCCCceehhhhhhHHHhhhh-hcceecccC-CchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHhc
Confidence 345678888877999999999999994 444333332 3345667777543 235666788999999998754221111
Q ss_pred cCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCC
Q 010754 396 GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 396 ~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
+-...-.-+.|++.+..++.+-..|.+.|++..+.+.+-..-.|...+++++|.+.+.
T Consensus 115 gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~ 172 (615)
T KOG2247|consen 115 GGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDY 172 (615)
T ss_pred cCcchHHHHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccce
Confidence 1111122278999999999999999999999887776555444888999999999986
No 435
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=92.80 E-value=0.56 Score=29.19 Aligned_cols=31 Identities=29% Similarity=0.514 Sum_probs=25.8
Q ss_pred CcEEEEEEcCCC---CEEEEEeCCCcEEEEECCC
Q 010754 399 GEVNCVKWDPTG---SLLASCSDDVTAKIWNMKQ 429 (502)
Q Consensus 399 ~~i~~l~~sp~g---~~las~s~dg~i~iwd~~~ 429 (502)
+.|.+++|+|.. .+|+.+-.-|.|.|+|+++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 468899999854 4888887889999999995
No 436
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=92.59 E-value=10 Score=36.59 Aligned_cols=250 Identities=11% Similarity=0.078 Sum_probs=109.6
Q ss_pred eeCCCceEEeccCCC-ceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEE
Q 010754 202 EIPNSDVTILEGHTS-EVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTL 280 (502)
Q Consensus 202 ~~~~~~~~~l~~H~~-~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l 280 (502)
.+....+..|..+.+ ......++|+++.++-......|+-.|+.+.+.. .+.... ...+-..
T Consensus 66 DL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~-----------~vy~~p------~~~~g~g 128 (386)
T PF14583_consen 66 DLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEER-----------VVYEVP------DDWKGYG 128 (386)
T ss_dssp ETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EE-----------EEEE--------TTEEEEE
T ss_pred EcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEE-----------EEEECC------ccccccc
Confidence 455666777766542 3446777888887776666678888888876421 111111 1223334
Q ss_pred EE--CCCCCEEEEEEC----------------------CCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecC
Q 010754 281 DW--NGEGTLLATGSY----------------------DGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD 336 (502)
Q Consensus 281 ~~--s~~g~~l~s~~~----------------------dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d 336 (502)
.| +.++..++..-. ...|.-.|+.+.....+.....-+..+.|+|....+++=|..
T Consensus 129 t~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~~~~wlgH~~fsP~dp~li~fCHE 208 (386)
T PF14583_consen 129 TWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFEDTDWLGHVQFSPTDPTLIMFCHE 208 (386)
T ss_dssp EEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEEESS-EEEEEEETTEEEEEEEEE-
T ss_pred ceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEecCccccCcccCCCCCCEEEEecc
Confidence 44 345555433211 122333355555555555556667889999977666654443
Q ss_pred C-----eEEEEEcCC-CceEEEEeeccC--CeEEEEecCCCE-E--EEE---eCCCeEEEEEcCCCcceEEEecCCCcEE
Q 010754 337 K-----TAIVWDVKT-EEWKQQFEFHSG--PTLDVDWRNNVS-F--ATS---STDNMIYVCKIGENRPIKTFAGHQGEVN 402 (502)
Q Consensus 337 ~-----~i~~wd~~~-~~~~~~~~~~~~--~v~~v~~~~~~~-~--~~~---~~d~~i~i~d~~~~~~~~~~~~h~~~i~ 402 (502)
| .-+||-+++ +...+.+..+.. .+.-=-|.+++. + ... +.+..|.-+|+.++....... .....
T Consensus 209 Gpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~~--~p~~~ 286 (386)
T PF14583_consen 209 GPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRRLME--MPWCS 286 (386)
T ss_dssp S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EEEEEE--E-SEE
T ss_pred CCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCceEEEe--CCcee
Confidence 3 135665432 222222222211 122223455443 1 111 223356667777765433222 23455
Q ss_pred EEEEcCCCCEEEEEeCCC----------------cEEEEECCCCeeEEE---------eccCCC-cEEEEEEccCCCCCC
Q 010754 403 CVKWDPTGSLLASCSDDV----------------TAKIWNMKQDKYVHD---------LREHSK-EIYTIRWSPTGSGTN 456 (502)
Q Consensus 403 ~l~~sp~g~~las~s~dg----------------~i~iwd~~~~~~~~~---------~~~h~~-~i~~v~~sp~g~~~~ 456 (502)
.+-.+++|++++-=+.|. .|+++++..+..... +.++.. .=....|+|||+
T Consensus 287 H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk--- 363 (386)
T PF14583_consen 287 HFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDGDRQVTHPHPSFSPDGK--- 363 (386)
T ss_dssp EEEE-TTSSEEEEEE-------------------EEEEEETTTTEEEEEEE-------BTTBSSTT----EE-TTSS---
T ss_pred eeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccCceeeeeeccCcceeecCCCccCCCCCccCCCCC---
Confidence 677789999886544332 466788877664311 111111 124678999998
Q ss_pred CCCccEEEEee-cCceEEEEee
Q 010754 457 NPNQQLILARL-IPYFLYWICS 477 (502)
Q Consensus 457 ~~~~~l~las~-~~~~~iw~~~ 477 (502)
.++..|. .|...++...
T Consensus 364 ----~VlF~Sd~~G~~~vY~v~ 381 (386)
T PF14583_consen 364 ----WVLFRSDMEGPPAVYLVE 381 (386)
T ss_dssp ----EEEEEE-TTSS-EEEEEE
T ss_pred ----EEEEECCCCCCccEEEEe
Confidence 5444433 2555555443
No 437
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=92.37 E-value=3.2 Score=44.45 Aligned_cols=110 Identities=15% Similarity=0.194 Sum_probs=69.3
Q ss_pred CCEEEEEecCCeEEEEEcCCCceEEEEeeccCC--------eEEEEec-----------------CCCEEEEEeCCCeEE
Q 010754 327 GDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP--------TLDVDWR-----------------NNVSFATSSTDNMIY 381 (502)
Q Consensus 327 ~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~--------v~~v~~~-----------------~~~~~~~~~~d~~i~ 381 (502)
+..|+.++.++.|.-.|..+|+.+.++...... +..+.+. .+.+++.++.|+.++
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li 273 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI 273 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence 456666666777777777777776666543211 1122221 234688888999999
Q ss_pred EEEcCCCcceEEEecCCCcEE-------------EEEEcC--CCCEEEEEeC----------CCcEEEEECCCCeeEEEe
Q 010754 382 VCKIGENRPIKTFAGHQGEVN-------------CVKWDP--TGSLLASCSD----------DVTAKIWNMKQDKYVHDL 436 (502)
Q Consensus 382 i~d~~~~~~~~~~~~h~~~i~-------------~l~~sp--~g~~las~s~----------dg~i~iwd~~~~~~~~~~ 436 (502)
-.|..+++.+..|. ..+.|. .+.-.| .+..++.|+. +|.|+-+|.++|+.+..+
T Consensus 274 ALDA~TGk~~W~fg-~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~ 352 (764)
T TIGR03074 274 ALDADTGKLCEDFG-NNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAW 352 (764)
T ss_pred EEECCCCCEEEEec-CCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeEE
Confidence 99999999887764 222221 111112 1335555542 688999999999998776
Q ss_pred c
Q 010754 437 R 437 (502)
Q Consensus 437 ~ 437 (502)
.
T Consensus 353 ~ 353 (764)
T TIGR03074 353 D 353 (764)
T ss_pred e
Confidence 5
No 438
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=92.31 E-value=5.1 Score=37.21 Aligned_cols=114 Identities=11% Similarity=0.208 Sum_probs=73.5
Q ss_pred CeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEEEEe-------CCCeEEEEEcCCCcceEEEec-----CCCcEEEE
Q 010754 337 KTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSS-------TDNMIYVCKIGENRPIKTFAG-----HQGEVNCV 404 (502)
Q Consensus 337 ~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~-------~d~~i~i~d~~~~~~~~~~~~-----h~~~i~~l 404 (502)
..|++||..+.++..--..-.+.|.++.|..+..+++++ ....+..||..+..- ..+.+ -.++|+.+
T Consensus 16 ~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w-~~~~~~~s~~ipgpv~a~ 94 (281)
T PF12768_consen 16 PGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTW-SSLGGGSSNSIPGPVTAL 94 (281)
T ss_pred CEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCee-eecCCcccccCCCcEEEE
Confidence 469999998888877666677889999997655544443 345678888876642 22332 13678887
Q ss_pred EEcC-CC-CEEEEEe-CC--CcEEEEECCCCeeEEE-eccCCCcEEEEEEccC
Q 010754 405 KWDP-TG-SLLASCS-DD--VTAKIWNMKQDKYVHD-LREHSKEIYTIRWSPT 451 (502)
Q Consensus 405 ~~sp-~g-~~las~s-~d--g~i~iwd~~~~~~~~~-~~~h~~~i~~v~~sp~ 451 (502)
.+.. ++ ++.++|. .+ ..|..||-.+...+.. .......|..+.+-|-
T Consensus 95 ~~~~~d~~~~~~aG~~~~g~~~l~~~dGs~W~~i~~~~~~~~t~I~~l~~~~l 147 (281)
T PF12768_consen 95 TFISNDGSNFWVAGRSANGSTFLMKYDGSSWSSIGSDILGSGTTIRGLQVLPL 147 (281)
T ss_pred EeeccCCceEEEeceecCCCceEEEEcCCceEeccccccCCCCEEEEEEEEec
Confidence 7643 23 3454544 33 3577788776666554 3334567888887776
No 439
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=92.19 E-value=19 Score=38.73 Aligned_cols=151 Identities=10% Similarity=0.111 Sum_probs=86.9
Q ss_pred CCEEEEEECCCeEEEEECC-CceEEEecCccCCe-------------EEEEEec--CCCEEEEEec----------CCeE
Q 010754 286 GTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPI-------------FSLKWNK--KGDYLLTGSC----------DKTA 339 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v-------------~~l~~~~--~~~~l~s~~~----------d~~i 339 (502)
+..++.++.|+.+.-.|.+ ++.+..+. ..+.| ..+.-.| .+..+++|+. +|.|
T Consensus 260 ~~rV~~~T~Dg~LiALDA~TGk~~W~fg-~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I 338 (764)
T TIGR03074 260 ARRIILPTSDARLIALDADTGKLCEDFG-NNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVI 338 (764)
T ss_pred CCEEEEecCCCeEEEEECCCCCEEEEec-CCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEE
Confidence 4578888889999888866 44444432 21111 0111112 1345666643 6889
Q ss_pred EEEEcCCCceEEEEeecc---------CCe---------EEEEecCC-CEEEEE------------------eCCCeEEE
Q 010754 340 IVWDVKTEEWKQQFEFHS---------GPT---------LDVDWRNN-VSFATS------------------STDNMIYV 382 (502)
Q Consensus 340 ~~wd~~~~~~~~~~~~~~---------~~v---------~~v~~~~~-~~~~~~------------------~~d~~i~i 382 (502)
+-+|.++|+.+..+.... +.+ ..+++.+. +.++.+ ...+.|.-
T Consensus 339 ~A~Da~TGkl~W~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvA 418 (764)
T TIGR03074 339 RAFDVNTGALVWAWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVA 418 (764)
T ss_pred EEEECCCCcEeeEEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEE
Confidence 999999999888775311 000 01111111 111111 12345677
Q ss_pred EEcCCCcceEEEecCCCc---------EEEEEEcC-CCC---EEEEEeCCCcEEEEECCCCeeEEEec
Q 010754 383 CKIGENRPIKTFAGHQGE---------VNCVKWDP-TGS---LLASCSDDVTAKIWNMKQDKYVHDLR 437 (502)
Q Consensus 383 ~d~~~~~~~~~~~~h~~~---------i~~l~~sp-~g~---~las~s~dg~i~iwd~~~~~~~~~~~ 437 (502)
.|..+++....+...... ..-+.+.. +|+ .++.++.+|.+++.|.++|+.+....
T Consensus 419 LD~~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~~ 486 (764)
T TIGR03074 419 LDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPVE 486 (764)
T ss_pred EeCCCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeece
Confidence 788888877766542111 11122322 563 78999999999999999999886543
No 440
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=92.18 E-value=8.4 Score=38.14 Aligned_cols=142 Identities=11% Similarity=0.060 Sum_probs=88.3
Q ss_pred CCCCEEEE-EECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCC-------EEEEEecCCeEEEEEcCCCceEEEEe
Q 010754 284 GEGTLLAT-GSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGD-------YLLTGSCDKTAIVWDVKTEEWKQQFE 354 (502)
Q Consensus 284 ~~g~~l~s-~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~-------~l~s~~~d~~i~~wd~~~~~~~~~~~ 354 (502)
.+..+|+. |+.-..++-.|++ |+.+.....|..- -+.|.|..+ .-++|-++..|.-.|.+-........
T Consensus 477 ~dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~ 554 (776)
T COG5167 477 NDSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVV 554 (776)
T ss_pred CCcceEEecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEecccccCCceeee
Confidence 34444443 3333455556655 5666666666554 566777432 23456667777777765433111111
Q ss_pred ec-----cCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 010754 355 FH-----SGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK 428 (502)
Q Consensus 355 ~~-----~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~ 428 (502)
.. .....+..-..++.+++++..|-|++||.-..+.-..+++-...|..|..+.+|+++++.+.. .|-+-|++
T Consensus 555 esKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~-yllL~d~~ 632 (776)
T COG5167 555 ESKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKN-YLLLTDVP 632 (776)
T ss_pred eehhccccccccccccccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecc-eEEEEecc
Confidence 11 112233333557889999999999999976655555677778889999999999988766654 67777753
No 441
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=92.10 E-value=3.6 Score=36.33 Aligned_cols=92 Identities=10% Similarity=0.095 Sum_probs=64.5
Q ss_pred eEEEEECCCCCEEE-EEECCCeEEEEEC--CCc------eEEEecC----ccCCeEEEEEecCCCEEEEEecCCeEEEEE
Q 010754 277 VTTLDWNGEGTLLA-TGSYDGQARIWST--NGD------LKCTLSK----HKGPIFSLKWNKKGDYLLTGSCDKTAIVWD 343 (502)
Q Consensus 277 v~~l~~s~~g~~l~-s~~~dg~i~iwd~--~~~------~~~~~~~----~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd 343 (502)
-..++|+.+.+.+. +-+.+-.|.-||. .+. .+..+.. ..-.--.++..-+|+..+++-..++|...|
T Consensus 160 sNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~d 239 (310)
T KOG4499|consen 160 SNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVD 239 (310)
T ss_pred CccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEEC
Confidence 35788988776554 4456678877883 221 2222221 111123455566888888888899999999
Q ss_pred cCCCceEEEEeeccCCeEEEEecCC
Q 010754 344 VKTEEWKQQFEFHSGPTLDVDWRNN 368 (502)
Q Consensus 344 ~~~~~~~~~~~~~~~~v~~v~~~~~ 368 (502)
..+|+.+..+......+++++|-..
T Consensus 240 p~tGK~L~eiklPt~qitsccFgGk 264 (310)
T KOG4499|consen 240 PTTGKILLEIKLPTPQITSCCFGGK 264 (310)
T ss_pred CCCCcEEEEEEcCCCceEEEEecCC
Confidence 9999999999999999999999654
No 442
>COG5290 IkappaB kinase complex, IKAP component [Transcription]
Probab=92.04 E-value=2.4 Score=43.98 Aligned_cols=131 Identities=16% Similarity=0.302 Sum_probs=73.0
Q ss_pred EEEEECCCCCEEEEEECC----CeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCC-----eEEEEEcCCCc
Q 010754 278 TTLDWNGEGTLLATGSYD----GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDK-----TAIVWDVKTEE 348 (502)
Q Consensus 278 ~~l~~s~~g~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~-----~i~~wd~~~~~ 348 (502)
..+.|-.|..+.+++... ..+++|..+|.+-......++.=..+.|-|+|..+++-..|| .|+++. ++|-
T Consensus 205 ~~i~wrgD~~y~~v~r~Ee~prra~rvysreg~lds~sep~~g~e~~LSWkpqgS~~ati~td~~~~S~~ViFfE-rNGL 283 (1243)
T COG5290 205 KIIFWRGDTEYNLVGRSEERPRRAFRVYSREGQLDSASEPVTGMEHQLSWKPQGSKYATIGTDGCSTSESVIFFE-RNGL 283 (1243)
T ss_pred eEEEEccCcceeeecchhcccccceeeeccccccccccCCcccchhccccccCCceeeeeccCCCCCcceEEEEc-cCCc
Confidence 345666666666666533 356777766655444444555556689999999999977665 355554 2221
Q ss_pred eEEEEe---eccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCC
Q 010754 349 WKQQFE---FHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT 409 (502)
Q Consensus 349 ~~~~~~---~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~ 409 (502)
....+. +-...+..++|.-...+......+.+.+|-..+-.-..+....-..+.-+.|+|.
T Consensus 284 rHGef~lr~~~dEk~~~~~wn~~s~vlav~~~n~~~lwttkNyhWYLK~e~~ip~~s~vkwhpe 347 (1243)
T COG5290 284 RHGEFDLRVGCDEKAFLENWNLLSTVLAVAEGNLLKLWTTKNYHWYLKVERQIPGISYVKWHPE 347 (1243)
T ss_pred ccCCccccCCchhhhhhhhhhHHHHHHHHhhcceEEEEEccceEEEEEEeecCCCcceeeeccc
Confidence 111111 1122345566655444455556778888876554322222222334555677774
No 443
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=92.02 E-value=1.6 Score=39.06 Aligned_cols=71 Identities=15% Similarity=0.191 Sum_probs=51.5
Q ss_pred ECCCCCEEEEEECCCeEEEEECCCceEEE--------ec-------CccCCeEEEEEecCCCEEEEEecCCeEEEEEcCC
Q 010754 282 WNGEGTLLATGSYDGQARIWSTNGDLKCT--------LS-------KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT 346 (502)
Q Consensus 282 ~s~~g~~l~s~~~dg~i~iwd~~~~~~~~--------~~-------~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~ 346 (502)
+..++.+|++-+.+|.+++||+....... +. .....|..+.++.+|.-+++-+ +|..+.|+..-
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L 96 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDL 96 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecccc
Confidence 34568899999999999999987543221 11 3456788889998888777654 57899999877
Q ss_pred CceEEEE
Q 010754 347 EEWKQQF 353 (502)
Q Consensus 347 ~~~~~~~ 353 (502)
+.++...
T Consensus 97 ~~W~~vs 103 (219)
T PF07569_consen 97 GCWIRVS 103 (219)
T ss_pred ceeEEec
Confidence 7666543
No 444
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=91.50 E-value=15 Score=36.12 Aligned_cols=133 Identities=11% Similarity=0.165 Sum_probs=76.4
Q ss_pred eEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCc-----ceE
Q 010754 318 IFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENR-----PIK 392 (502)
Q Consensus 318 v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~-----~~~ 392 (502)
...+..++++.+++.+.....++-||--...+...-......+..+.|.+++.++..+..|.+.. ....++ ...
T Consensus 241 f~~v~~~~dG~~~~vg~~G~~~~s~d~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g~~G~l~~-S~d~G~~~~~~~f~ 319 (398)
T PLN00033 241 FSTVNRSPDGDYVAVSSRGNFYLTWEPGQPYWQPHNRASARRIQNMGWRADGGLWLLTRGGGLYV-SKGTGLTEEDFDFE 319 (398)
T ss_pred eeeEEEcCCCCEEEEECCccEEEecCCCCcceEEecCCCccceeeeeEcCCCCEEEEeCCceEEE-ecCCCCccccccee
Confidence 34455667777666665444344454321112222233445688899988888888888887654 333333 222
Q ss_pred EEecC--CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEec---cCCCcEEEEEEccCCC
Q 010754 393 TFAGH--QGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR---EHSKEIYTIRWSPTGS 453 (502)
Q Consensus 393 ~~~~h--~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~---~h~~~i~~v~~sp~g~ 453 (502)
..... ...+..+.|.+++..+++| ..|.+.... ..++.-.... .-..+.+.+.|.+++.
T Consensus 320 ~~~~~~~~~~l~~v~~~~d~~~~a~G-~~G~v~~s~-D~G~tW~~~~~~~~~~~~ly~v~f~~~~~ 383 (398)
T PLN00033 320 EADIKSRGFGILDVGYRSKKEAWAAG-GSGILLRST-DGGKSWKRDKGADNIAANLYSVKFFDDKK 383 (398)
T ss_pred ecccCCCCcceEEEEEcCCCcEEEEE-CCCcEEEeC-CCCcceeEccccCCCCcceeEEEEcCCCc
Confidence 22211 2348899999887766554 567666654 4444322222 2345789999988765
No 445
>COG5290 IkappaB kinase complex, IKAP component [Transcription]
Probab=90.58 E-value=10 Score=39.70 Aligned_cols=90 Identities=19% Similarity=0.401 Sum_probs=50.0
Q ss_pred EEEecCCCE-EEEEeCCC-----eEEEEEcCCCcceEEE---ecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCee
Q 010754 362 DVDWRNNVS-FATSSTDN-----MIYVCKIGENRPIKTF---AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY 432 (502)
Q Consensus 362 ~v~~~~~~~-~~~~~~d~-----~i~i~d~~~~~~~~~~---~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~ 432 (502)
-++|.|.+. +++-+.|| .|.++..+ |-.-..+ .+....+..++|+-....++.+ ..+.|++|-..+...
T Consensus 251 ~LSWkpqgS~~ati~td~~~~S~~ViFfErN-GLrHGef~lr~~~dEk~~~~~wn~~s~vlav~-~~n~~~lwttkNyhW 328 (1243)
T COG5290 251 QLSWKPQGSKYATIGTDGCSTSESVIFFERN-GLRHGEFDLRVGCDEKAFLENWNLLSTVLAVA-EGNLLKLWTTKNYHW 328 (1243)
T ss_pred ccccccCCceeeeeccCCCCCcceEEEEccC-CcccCCccccCCchhhhhhhhhhHHHHHHHHh-hcceEEEEEccceEE
Confidence 478877554 66655544 24444322 2111111 1223345667777665555544 345799998776554
Q ss_pred EEEeccCCCcEEEEEEccCCC
Q 010754 433 VHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 433 ~~~~~~h~~~i~~v~~sp~g~ 453 (502)
.....-.-..|.-+.|+|...
T Consensus 329 YLK~e~~ip~~s~vkwhpe~~ 349 (1243)
T COG5290 329 YLKVERQIPGISYVKWHPEEK 349 (1243)
T ss_pred EEEEeecCCCcceeeeccccC
Confidence 433333344578899999866
No 446
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=90.25 E-value=16 Score=34.33 Aligned_cols=228 Identities=13% Similarity=0.153 Sum_probs=101.4
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECC
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 295 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~d 295 (502)
..+..|.|.....-+++|. .+.| +...++-..-. ... ............++.|..+ ..+++| ..
T Consensus 17 ~~l~dV~F~d~~~G~~VG~-~g~i--l~T~DGG~tW~---------~~~--~~~~~~~~~~l~~I~f~~~-~g~ivG-~~ 80 (302)
T PF14870_consen 17 KPLLDVAFVDPNHGWAVGA-YGTI--LKTTDGGKTWQ---------PVS--LDLDNPFDYHLNSISFDGN-EGWIVG-EP 80 (302)
T ss_dssp S-EEEEEESSSS-EEEEET-TTEE--EEESSTTSS-E---------E-------S-----EEEEEEEETT-EEEEEE-ET
T ss_pred CceEEEEEecCCEEEEEec-CCEE--EEECCCCcccc---------ccc--cCCCccceeeEEEEEecCC-ceEEEc-CC
Confidence 4688999995556666664 4543 44433321100 000 0000000123667777643 344444 44
Q ss_pred CeEEEEECCC-ceEEEec---CccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC-ceEEEEeeccCCeEEEEecCCCE
Q 010754 296 GQARIWSTNG-DLKCTLS---KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE-EWKQQFEFHSGPTLDVDWRNNVS 370 (502)
Q Consensus 296 g~i~iwd~~~-~~~~~~~---~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~v~~v~~~~~~~ 370 (502)
|. .+...++ ..-..+. .-.+....+....++..++ ++..|.|+.=. ..| .+........+.+.++.-.+++.
T Consensus 81 g~-ll~T~DgG~tW~~v~l~~~lpgs~~~i~~l~~~~~~l-~~~~G~iy~T~-DgG~tW~~~~~~~~gs~~~~~r~~dG~ 157 (302)
T PF14870_consen 81 GL-LLHTTDGGKTWERVPLSSKLPGSPFGITALGDGSAEL-AGDRGAIYRTT-DGGKTWQAVVSETSGSINDITRSSDGR 157 (302)
T ss_dssp TE-EEEESSTTSS-EE----TT-SS-EEEEEEEETTEEEE-EETT--EEEES-STTSSEEEEE-S----EEEEEE-TTS-
T ss_pred ce-EEEecCCCCCcEEeecCCCCCCCeeEEEEcCCCcEEE-EcCCCcEEEeC-CCCCCeeEcccCCcceeEeEEECCCCc
Confidence 53 3333443 2222211 1223334444444443333 34445444322 223 34444455566788888888888
Q ss_pred EEEEeCCCeEE-EEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE-CCCCeeEEE----eccCCCcEE
Q 010754 371 FATSSTDNMIY-VCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWN-MKQDKYVHD----LREHSKEIY 444 (502)
Q Consensus 371 ~~~~~~d~~i~-i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd-~~~~~~~~~----~~~h~~~i~ 444 (502)
+++.+..|.++ -||.....-...-......|..|.|+|++.+.+.+ ..|.|++=+ ......... +....-.+.
T Consensus 158 ~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~l 236 (302)
T PF14870_consen 158 YVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWSEPIIPIKTNGYGIL 236 (302)
T ss_dssp EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE---B-TTSS--S-EE
T ss_pred EEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEccCCCCccccccccCCcccCceeeE
Confidence 77777777664 56654432222223345789999999998876655 778887776 222222111 112223489
Q ss_pred EEEEccCCCCCCCCCccEEEEeecCce
Q 010754 445 TIRWSPTGSGTNNPNQQLILARLIPYF 471 (502)
Q Consensus 445 ~v~~sp~g~~~~~~~~~l~las~~~~~ 471 (502)
+++|.+++. +.+++.++.+
T Consensus 237 d~a~~~~~~--------~wa~gg~G~l 255 (302)
T PF14870_consen 237 DLAYRPPNE--------IWAVGGSGTL 255 (302)
T ss_dssp EEEESSSS---------EEEEESTT-E
T ss_pred EEEecCCCC--------EEEEeCCccE
Confidence 999999876 4555555543
No 447
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=90.23 E-value=1.8 Score=38.64 Aligned_cols=84 Identities=15% Similarity=0.181 Sum_probs=53.1
Q ss_pred EcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEE
Q 010754 223 WSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWS 302 (502)
Q Consensus 223 ~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd 302 (502)
+..++++|++.+.+|.+++||+.+.+...... ++........ .........|..+.++.+|.-+++-+ +|..+.|+
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~--Si~pll~~~~-~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~ 93 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPV--SIAPLLNSSP-VSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYS 93 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCc--cHHHHhcccc-cccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEec
Confidence 44468889999999999999999987543220 0000000000 00003456799999999998777655 58889998
Q ss_pred CCCceEEE
Q 010754 303 TNGDLKCT 310 (502)
Q Consensus 303 ~~~~~~~~ 310 (502)
.+-..-..
T Consensus 94 ~~L~~W~~ 101 (219)
T PF07569_consen 94 PDLGCWIR 101 (219)
T ss_pred cccceeEE
Confidence 76544433
No 448
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=90.06 E-value=3.4 Score=35.38 Aligned_cols=31 Identities=26% Similarity=0.558 Sum_probs=25.4
Q ss_pred CCeEEEEECCCC------CEEEEEECCCeEEEEECCC
Q 010754 275 KDVTTLDWNGEG------TLLATGSYDGQARIWSTNG 305 (502)
Q Consensus 275 ~~v~~l~~s~~g------~~l~s~~~dg~i~iwd~~~ 305 (502)
..|..++|||.| .+|++.+.+|.|.||...+
T Consensus 86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 379999999954 4788899999999997543
No 449
>KOG1983 consensus Tomosyn and related SNARE-interacting proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=90.05 E-value=12 Score=41.55 Aligned_cols=30 Identities=27% Similarity=0.416 Sum_probs=25.5
Q ss_pred ceEEEEEcCCCCeEEEEeCCCcEEEEecCC
Q 010754 217 EVCACAWSPAGSLLASGSGDSTARIWTIAD 246 (502)
Q Consensus 217 ~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~ 246 (502)
....++|+|.-.++|.|...|.|+++-...
T Consensus 37 ~~~~~afD~~q~llai~t~tg~i~~yg~~~ 66 (993)
T KOG1983|consen 37 TPSALAFDPTQGLLAIGTRTGAIKIYGQPG 66 (993)
T ss_pred CCcceeeccccceEEEEEecccEEEecccc
Confidence 445789999999999999999999997654
No 450
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=89.61 E-value=4.2 Score=39.97 Aligned_cols=88 Identities=9% Similarity=0.037 Sum_probs=60.2
Q ss_pred EEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEE----EecCC--------------C
Q 010754 308 KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDV----DWRNN--------------V 369 (502)
Q Consensus 308 ~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v----~~~~~--------------~ 369 (502)
...+......+.+++.+|.+++.++...=|.|.++|+.++..++.+++-.+.-..- .-... .
T Consensus 300 r~~l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~ 379 (415)
T PF14655_consen 300 RFGLPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFA 379 (415)
T ss_pred EEeeccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcce
Confidence 34455566678999999999998888888999999999988777666543321111 00000 1
Q ss_pred E--EEEEeCCCeEEEEEcCCCcceEEEe
Q 010754 370 S--FATSSTDNMIYVCKIGENRPIKTFA 395 (502)
Q Consensus 370 ~--~~~~~~d~~i~i~d~~~~~~~~~~~ 395 (502)
. ++-+-..|.|-||.++.+..+..+.
T Consensus 380 l~LvIyaprRg~lEvW~~~~g~Rv~a~~ 407 (415)
T PF14655_consen 380 LFLVIYAPRRGILEVWSMRQGPRVAAFN 407 (415)
T ss_pred EEEEEEeccCCeEEEEecCCCCEEEEEE
Confidence 1 3345567889999998887766664
No 451
>KOG1900 consensus Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=89.50 E-value=8.7 Score=42.57 Aligned_cols=137 Identities=11% Similarity=0.160 Sum_probs=88.3
Q ss_pred ECCCeEEEEECCC-ceEEEecCccCCeEEEEE--------ecCCCEEEEEecCCeEEEEEcC----CCc---eE--EEEe
Q 010754 293 SYDGQARIWSTNG-DLKCTLSKHKGPIFSLKW--------NKKGDYLLTGSCDKTAIVWDVK----TEE---WK--QQFE 354 (502)
Q Consensus 293 ~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~--------~~~~~~l~s~~~d~~i~~wd~~----~~~---~~--~~~~ 354 (502)
+-|+.+.+|+.+. .....+.+....|..+.. -|.=++++..+.--.|.++-+. ++. .. .++.
T Consensus 96 TiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i~ 175 (1311)
T KOG1900|consen 96 TIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKIS 175 (1311)
T ss_pred EeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceeee
Confidence 4578999999774 556666666666666654 2333456665666667776442 111 11 1122
Q ss_pred eccCCeEEEEecCCCEEEEEeCCCeEEEE--EcCCC---c-c----------------eEEEe-cCCCcEEEEEEcCCCC
Q 010754 355 FHSGPTLDVDWRNNVSFATSSTDNMIYVC--KIGEN---R-P----------------IKTFA-GHQGEVNCVKWDPTGS 411 (502)
Q Consensus 355 ~~~~~v~~v~~~~~~~~~~~~~d~~i~i~--d~~~~---~-~----------------~~~~~-~h~~~i~~l~~sp~g~ 411 (502)
.....|.++....++++..+|.||.|+-. ....+ + + +..+. .+..+|..|..+..-.
T Consensus 176 ~dg~~V~~I~~t~nGRIF~~G~dg~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~SR~ 255 (1311)
T KOG1900|consen 176 VDGVSVNCITYTENGRIFFAGRDGNLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDNSRN 255 (1311)
T ss_pred cCCceEEEEEeccCCcEEEeecCCCEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEeccccc
Confidence 23456888888888888888888855332 22111 0 0 12223 5677999999998888
Q ss_pred EEEEEeCCCcEEEEECCC
Q 010754 412 LLASCSDDVTAKIWNMKQ 429 (502)
Q Consensus 412 ~las~s~dg~i~iwd~~~ 429 (502)
.+.+-+..|+|.+||+..
T Consensus 256 IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 256 ILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred eeeeeccCceEEEEEccC
Confidence 999999999999999875
No 452
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=88.88 E-value=15 Score=35.34 Aligned_cols=102 Identities=15% Similarity=0.145 Sum_probs=56.6
Q ss_pred CeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEe-------eccCCeEEEEecCC----CEEEEEeC-C-------
Q 010754 317 PIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFE-------FHSGPTLDVDWRNN----VSFATSST-D------- 377 (502)
Q Consensus 317 ~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~-------~~~~~v~~v~~~~~----~~~~~~~~-d------- 377 (502)
..+.|+|.|+|..|++ ...|.|++++ ..+.....+. ........++++|+ ..+.+... .
T Consensus 3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~ 80 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDN 80 (331)
T ss_dssp SEEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSE
T ss_pred CceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCc
Confidence 3578999999877665 6699999999 4454322221 12345788888873 44433332 1
Q ss_pred -CeEEEEEcCCC-------c-ceEEEec---CCCcEEEEEEcCCCCEEEEEeCCC
Q 010754 378 -NMIYVCKIGEN-------R-PIKTFAG---HQGEVNCVKWDPTGSLLASCSDDV 420 (502)
Q Consensus 378 -~~i~i~d~~~~-------~-~~~~~~~---h~~~i~~l~~sp~g~~las~s~dg 420 (502)
..|.-|....+ + .+..+.. ....-..|.|.|+|.+.++.+..+
T Consensus 81 ~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~ 135 (331)
T PF07995_consen 81 DNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGG 135 (331)
T ss_dssp EEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TT
T ss_pred ceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCC
Confidence 23444444333 1 1122222 233466799999998777766544
No 453
>KOG2377 consensus Uncharacterized conserved protein [Function unknown]
Probab=88.85 E-value=3.8 Score=39.84 Aligned_cols=120 Identities=11% Similarity=0.127 Sum_probs=77.8
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE
Q 010754 214 HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 293 (502)
Q Consensus 214 H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~ 293 (502)
..++|.++.|++|.+.||.--.|.+|.+.+......... ....-...+..|....|+.+ .-+|.-+
T Consensus 65 d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~-------------~~~~ck~k~~~IlGF~W~~s-~e~A~i~ 130 (657)
T KOG2377|consen 65 DKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLE-------------YTQECKTKNANILGFCWTSS-TEIAFIT 130 (657)
T ss_pred CCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhH-------------HHHHhccCcceeEEEEEecC-eeEEEEe
Confidence 457999999999999999999999999999854332110 00111122445899999876 4455555
Q ss_pred CCCeEEEEEC--CCceEEEecCccCCeEEEEEecCCCEEEEEe--cCCeEEEEEcCCCc
Q 010754 294 YDGQARIWST--NGDLKCTLSKHKGPIFSLKWNKKGDYLLTGS--CDKTAIVWDVKTEE 348 (502)
Q Consensus 294 ~dg~i~iwd~--~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~--~d~~i~~wd~~~~~ 348 (502)
..| +-+|.. ....++....|+..|.-..|.++.+.++.++ ..+++.=+-++++.
T Consensus 131 ~~G-~e~y~v~pekrslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf~~~~~~ 188 (657)
T KOG2377|consen 131 DQG-IEFYQVLPEKRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLNPFHFRAGT 188 (657)
T ss_pred cCC-eEEEEEchhhhhhhhhhhcccCccEEEEccccceEeeeccccccccccEEEeece
Confidence 434 555653 3445556677888888889999877655443 34444445555443
No 454
>KOG1898 consensus Splicing factor 3b, subunit 3 [RNA processing and modification]
Probab=88.76 E-value=40 Score=36.78 Aligned_cols=128 Identities=5% Similarity=0.074 Sum_probs=75.4
Q ss_pred CeEEEEEc-CCCceEEEEee--ccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEec--CCCcEEEEEEcCCCC
Q 010754 337 KTAIVWDV-KTEEWKQQFEF--HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAG--HQGEVNCVKWDPTGS 411 (502)
Q Consensus 337 ~~i~~wd~-~~~~~~~~~~~--~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~--h~~~i~~l~~sp~g~ 411 (502)
|.++.|++ +.++.+.-+.. -.+++.+++--.+ .+.++....+++||+...++++...- -...|+.+.+. +.
T Consensus 912 g~~ytyk~~~~g~~lellh~T~~~~~v~Ai~~f~~--~~LagvG~~l~~YdlG~K~lLRk~e~k~~p~~Is~iqt~--~~ 987 (1205)
T KOG1898|consen 912 GFVYTYKFVRNGDKLELLHKTEIPGPVGAICPFQG--RVLAGVGRFLRLYDLGKKKLLRKCELKFIPNRISSIQTY--GA 987 (1205)
T ss_pred CceEEEEEEecCceeeeeeccCCCccceEEeccCC--EEEEecccEEEEeeCChHHHHhhhhhccCceEEEEEeec--ce
Confidence 44666665 23332222211 2334555554333 56667788999999999887665432 24568888875 56
Q ss_pred EEEEEeCCCcEEEEECC-CCeeEEEeccC--CCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEeee
Q 010754 412 LLASCSDDVTAKIWNMK-QDKYVHDLREH--SKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICSI 478 (502)
Q Consensus 412 ~las~s~dg~i~iwd~~-~~~~~~~~~~h--~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~ 478 (502)
.++.|...-.+.++..+ .++.+..+... ...|+++.+--.++ +|.+|....+|...+
T Consensus 988 RI~VgD~qeSV~~~~y~~~~n~l~~fadD~~pR~Vt~~~~lD~~t----------vagaDrfGNi~~vR~ 1047 (1205)
T KOG1898|consen 988 RIVVGDIQESVHFVRYRREDNQLIVFADDPVPRHVTALELLDYDT----------VAGADRFGNIAVVRI 1047 (1205)
T ss_pred EEEEeeccceEEEEEEecCCCeEEEEeCCCccceeeEEEEecCCc----------eeeccccCcEEEEEC
Confidence 77777765555544332 23344444422 23477777766664 677888888887544
No 455
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=88.63 E-value=23 Score=33.87 Aligned_cols=118 Identities=13% Similarity=0.187 Sum_probs=68.6
Q ss_pred CceEEEEEcCCCCeEEEEeCCCc------EEEEecCCCC-ccCCCCCCCceeEEEeeecC-ccccCCCCeEEEEECCCCC
Q 010754 216 SEVCACAWSPAGSLLASGSGDST------ARIWTIADGT-SNGGAQNGPLNVLVLKHVKG-RTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~------v~iw~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~l~~s~~g~ 287 (502)
+.+..+.+.|++..+++.+.+|. +..+++.... ...... ......+....+ .......+.-+|++.++|.
T Consensus 20 GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~ 97 (326)
T PF13449_consen 20 GGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVT--ILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGS 97 (326)
T ss_pred CcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceE--eccceeccCCCCCcCCcCCCChhHeEEecCCC
Confidence 67889999977667777788887 5555554311 000000 001111111111 1111122566888877888
Q ss_pred EEEEEECC------CeEEEEECCCceEEEec---------------CccCCeEEEEEecCCCEEEEEec
Q 010754 288 LLATGSYD------GQARIWSTNGDLKCTLS---------------KHKGPIFSLKWNKKGDYLLTGSC 335 (502)
Q Consensus 288 ~l~s~~~d------g~i~iwd~~~~~~~~~~---------------~~~~~v~~l~~~~~~~~l~s~~~ 335 (502)
++++.=.+ ..|..++.++.....+. ..+...-+|+++|+|+.|+++..
T Consensus 98 ~~is~E~~~~~~~~p~I~~~~~~G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E 166 (326)
T PF13449_consen 98 FWISSEGGRTGGIPPRIRRFDLDGRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAME 166 (326)
T ss_pred EEEEeCCccCCCCCCEEEEECCCCcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEEC
Confidence 88777666 78888887765543331 23456889999999997776543
No 456
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=88.34 E-value=26 Score=34.15 Aligned_cols=146 Identities=13% Similarity=0.061 Sum_probs=78.4
Q ss_pred EEEEEECCCeEEEEECCCce-EEEecCc--cCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeecc-CCeEEE
Q 010754 288 LLATGSYDGQARIWSTNGDL-KCTLSKH--KGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS-GPTLDV 363 (502)
Q Consensus 288 ~l~s~~~dg~i~iwd~~~~~-~~~~~~~--~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~-~~v~~v 363 (502)
.++++..+|.|.-.|.++.. +.....- ...+.+-.+..+|+ ++.++.++.++.+|.++|+.+..+.... ..+..-
T Consensus 70 ~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~-i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~~~ 148 (370)
T COG1520 70 TVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGK-IYVGSWDGKLYALDASTGTLVWSRNVGGSPYYASP 148 (370)
T ss_pred eEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCe-EEEecccceEEEEECCCCcEEEEEecCCCeEEecC
Confidence 34445677777777766443 2221111 11222222223555 7888889999999998999888777655 111111
Q ss_pred EecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCC---cEEEEEEcCCCCEEEEEeC--CCcEEEEECCCCeeEEE
Q 010754 364 DWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQG---EVNCVKWDPTGSLLASCSD--DVTAKIWNMKQDKYVHD 435 (502)
Q Consensus 364 ~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~---~i~~l~~sp~g~~las~s~--dg~i~iwd~~~~~~~~~ 435 (502)
....+..+..++.++.+...+..++.....+..... .+..--...++ .+..+.. ++.+.-.|..+|.....
T Consensus 149 ~v~~~~~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~vy~~~~~~~~~~~a~~~~~G~~~w~ 224 (370)
T COG1520 149 PVVGDGTVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYGSPAIASG-TVYVGSDGYDGILYALNAEDGTLKWS 224 (370)
T ss_pred cEEcCcEEEEecCCCeEEEEEccCCcEEEEEecCCccccccccCceeecc-eEEEecCCCcceEEEEEccCCcEeee
Confidence 223344455555788888888888877655443211 11110011123 3334443 45555566666665544
No 457
>KOG2280 consensus Vacuolar assembly/sorting protein VPS16 [Intracellular trafficking, secretion, and vesicular transport]
Probab=88.09 E-value=12 Score=39.04 Aligned_cols=51 Identities=8% Similarity=0.258 Sum_probs=41.3
Q ss_pred CCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCC
Q 010754 336 DKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGE 387 (502)
Q Consensus 336 d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~ 387 (502)
--.|+||+. +|+.+..+....+.+..+.|+.+..+++...+|++++|++-.
T Consensus 63 ~~~I~If~~-sG~lL~~~~w~~~~lI~mgWs~~eeLI~v~k~g~v~Vy~~~g 113 (829)
T KOG2280|consen 63 RPYIRIFNI-SGQLLGRILWKHGELIGMGWSDDEELICVQKDGTVHVYGLLG 113 (829)
T ss_pred ceeEEEEec-cccchHHHHhcCCCeeeecccCCceEEEEeccceEEEeecch
Confidence 346888885 566666665556689999999999999999999999999754
No 458
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=88.06 E-value=12 Score=30.04 Aligned_cols=111 Identities=14% Similarity=0.074 Sum_probs=62.4
Q ss_pred EEEECCCCCEEEEEECCCeEEEEECCCce--------EEEecCccCCeEEEEEec-----CCCEEEEEecCCeEEEEEcC
Q 010754 279 TLDWNGEGTLLATGSYDGQARIWSTNGDL--------KCTLSKHKGPIFSLKWNK-----KGDYLLTGSCDKTAIVWDVK 345 (502)
Q Consensus 279 ~l~~s~~g~~l~s~~~dg~i~iwd~~~~~--------~~~~~~~~~~v~~l~~~~-----~~~~l~s~~~d~~i~~wd~~ 345 (502)
.-.|......|++++..|.|.|++..... ...+..-...|++|+--+ ....|+.| ....+..||+.
T Consensus 3 iGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliG-t~t~llaYDV~ 81 (136)
T PF14781_consen 3 IGKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIG-TQTSLLAYDVE 81 (136)
T ss_pred EEEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEe-ccceEEEEEcc
Confidence 34565666678888889999999854221 112223445667765433 22455555 45689999997
Q ss_pred CCceEEEEeeccCCeEEEEec----CCCEEEEEeCCCeEEEEEcCCCcce
Q 010754 346 TEEWKQQFEFHSGPTLDVDWR----NNVSFATSSTDNMIYVCKIGENRPI 391 (502)
Q Consensus 346 ~~~~~~~~~~~~~~v~~v~~~----~~~~~~~~~~d~~i~i~d~~~~~~~ 391 (502)
...-+.. +.-...+.++.+- ....++..+.+..|.-||.......
T Consensus 82 ~N~d~Fy-ke~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~f 130 (136)
T PF14781_consen 82 NNSDLFY-KEVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIF 130 (136)
T ss_pred cCchhhh-hhCccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEE
Confidence 6653322 2223455555551 1233555555566666665544433
No 459
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=88.02 E-value=44 Score=36.34 Aligned_cols=154 Identities=14% Similarity=0.107 Sum_probs=88.9
Q ss_pred CCCCeEEEEEC---C----CCCEEEEEECCCeEEEEECC----------------CceEEEecC---ccCCeEEEEEec-
Q 010754 273 KSKDVTTLDWN---G----EGTLLATGSYDGQARIWSTN----------------GDLKCTLSK---HKGPIFSLKWNK- 325 (502)
Q Consensus 273 ~~~~v~~l~~s---~----~g~~l~s~~~dg~i~iwd~~----------------~~~~~~~~~---~~~~v~~l~~~~- 325 (502)
...+|..|+|. . ..++|++ -....+.|+... ...+..+.. ...+...++|+|
T Consensus 78 ~~~PI~qI~fa~~~~~~~~~~~~l~V-rt~~st~I~~p~~~~~~~~~~~~~s~i~~~~l~~i~~~~tgg~~~aDv~FnP~ 156 (765)
T PF10214_consen 78 DGSPIKQIKFATLSESFDEKSRWLAV-RTETSTTILRPEYHRVISSIRSRPSRIDPNPLLTISSSDTGGFPHADVAFNPW 156 (765)
T ss_pred CCCCeeEEEecccccccCCcCcEEEE-EcCCEEEEEEcccccccccccCCccccccceeEEechhhcCCCccceEEeccC
Confidence 35678888887 2 1234444 344566666511 112222221 234678899998
Q ss_pred CCCEEEEEecCCeEEEEEcCCCc-----eEEEEeeccCC----------eEEEEecCCCEEEEEeCCCeEEEEEcCCCcc
Q 010754 326 KGDYLLTGSCDKTAIVWDVKTEE-----WKQQFEFHSGP----------TLDVDWRNNVSFATSSTDNMIYVCKIGENRP 390 (502)
Q Consensus 326 ~~~~l~s~~~d~~i~~wd~~~~~-----~~~~~~~~~~~----------v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~ 390 (502)
+...||+....|...|||+.... .........+. -..|.|.++..-+..+....+.++|+.+...
T Consensus 157 ~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r~~l~~~d~~~~~~ 236 (765)
T PF10214_consen 157 DQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNRSKLMLIDFESNWQ 236 (765)
T ss_pred ccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcCCceEEEECCCCCc
Confidence 44689999999999999992111 11111111122 2367886654444445667788999988765
Q ss_pred eE-E-EecCCCcEEEEEEcCC--CCEEEEEeCCCcEEEEECCC
Q 010754 391 IK-T-FAGHQGEVNCVKWDPT--GSLLASCSDDVTAKIWNMKQ 429 (502)
Q Consensus 391 ~~-~-~~~h~~~i~~l~~sp~--g~~las~s~dg~i~iwd~~~ 429 (502)
.. . .......|..+.-+|. +..++-.+ ..|...++..
T Consensus 237 ~~~l~~~~~~~~IlDv~~~~~~~~~~FiLTs--~eiiw~~~~~ 277 (765)
T PF10214_consen 237 TEYLVTAKTWSWILDVKRSPDNPSHVFILTS--KEIIWLDVKS 277 (765)
T ss_pred cchhccCCChhheeeEEecCCccceEEEEec--CeEEEEEccC
Confidence 33 1 1223467888888876 33333322 3576667665
No 460
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=87.90 E-value=2.8 Score=25.66 Aligned_cols=40 Identities=13% Similarity=0.178 Sum_probs=27.8
Q ss_pred CCCCEEEEEe-CCCcEEEEECCCCeeEEEeccCCCcEEEEEE
Q 010754 408 PTGSLLASCS-DDVTAKIWNMKQDKYVHDLREHSKEIYTIRW 448 (502)
Q Consensus 408 p~g~~las~s-~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~ 448 (502)
|++++|.++. .+++|.++|..+++.+..+... ..-..++|
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg-~~P~~i~~ 41 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVG-GYPFGVAV 41 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECC-CCCceEEe
Confidence 5677665544 5889999999999988887753 23345544
No 461
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=87.46 E-value=2.8 Score=43.49 Aligned_cols=38 Identities=16% Similarity=0.346 Sum_probs=29.5
Q ss_pred cEEEEEEcC----CCCEEEEEeCCCcEEEEECCCCeeEEEec
Q 010754 400 EVNCVKWDP----TGSLLASCSDDVTAKIWNMKQDKYVHDLR 437 (502)
Q Consensus 400 ~i~~l~~sp----~g~~las~s~dg~i~iwd~~~~~~~~~~~ 437 (502)
.+..+++++ +..+|++.+.|+++|+||+.+++++....
T Consensus 216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~~ 257 (547)
T PF11715_consen 216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATID 257 (547)
T ss_dssp -EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEEE
T ss_pred ccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEec
Confidence 355566666 67899999999999999999999976653
No 462
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=87.23 E-value=14 Score=29.75 Aligned_cols=121 Identities=12% Similarity=0.069 Sum_probs=70.6
Q ss_pred EEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC-----CCCEEEEEEC
Q 010754 220 ACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-----EGTLLATGSY 294 (502)
Q Consensus 220 ~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~-----~g~~l~s~~~ 294 (502)
.-.|......|++++.-|+|.|++..............+..+. ....|++|+--+ +...|+.|+.
T Consensus 3 iGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN----------in~~italaaG~l~~~~~~D~LliGt~ 72 (136)
T PF14781_consen 3 IGKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLN----------INQEITALAAGRLKPDDGRDCLLIGTQ 72 (136)
T ss_pred EEEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEE----------CCCceEEEEEEecCCCCCcCEEEEecc
Confidence 3456666667888888899999987654322211111111111 134577775433 3446776664
Q ss_pred CCeEEEEECCCceEEEecCccCCeEEEEEec---CCCEEEEEecCCeEEEEEcCCCceEE
Q 010754 295 DGQARIWSTNGDLKCTLSKHKGPIFSLKWNK---KGDYLLTGSCDKTAIVWDVKTEEWKQ 351 (502)
Q Consensus 295 dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~---~~~~l~s~~~d~~i~~wd~~~~~~~~ 351 (502)
..+..||+....-.-++.-...|.++.+-. ...-++..+.+..|.-||....+...
T Consensus 73 -t~llaYDV~~N~d~Fyke~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fW 131 (136)
T PF14781_consen 73 -TSLLAYDVENNSDLFYKEVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFW 131 (136)
T ss_pred -ceEEEEEcccCchhhhhhCccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEE
Confidence 779999987655555555567777777643 12344545556677777765544433
No 463
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=87.21 E-value=3.9 Score=42.48 Aligned_cols=73 Identities=16% Similarity=0.200 Sum_probs=45.7
Q ss_pred CCCCEEEEEECCCeEEEEECCC-----ceEE-E-ecC--------------------ccCCeEEEEEec----CCCEEEE
Q 010754 284 GEGTLLATGSYDGQARIWSTNG-----DLKC-T-LSK--------------------HKGPIFSLKWNK----KGDYLLT 332 (502)
Q Consensus 284 ~~g~~l~s~~~dg~i~iwd~~~-----~~~~-~-~~~--------------------~~~~v~~l~~~~----~~~~l~s 332 (502)
++...++.+..||.+....... .... . +.. ....+..++++. +..++++
T Consensus 156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t 235 (547)
T PF11715_consen 156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFT 235 (547)
T ss_dssp -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEE
T ss_pred cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEE
Confidence 4666888888898887776432 1111 1 111 123455666666 6689999
Q ss_pred EecCCeEEEEEcCCCceEEEEeec
Q 010754 333 GSCDKTAIVWDVKTEEWKQQFEFH 356 (502)
Q Consensus 333 ~~~d~~i~~wd~~~~~~~~~~~~~ 356 (502)
.+.|+++++||+.+++++......
T Consensus 236 l~~D~~LRiW~l~t~~~~~~~~~~ 259 (547)
T PF11715_consen 236 LSRDHTLRIWSLETGQCLATIDLL 259 (547)
T ss_dssp EETTSEEEEEETTTTCEEEEEETT
T ss_pred EeCCCeEEEEECCCCeEEEEeccc
Confidence 999999999999999997766443
No 464
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=87.16 E-value=3.3 Score=40.21 Aligned_cols=157 Identities=12% Similarity=0.041 Sum_probs=94.0
Q ss_pred CCCeEEEEECCCCCEEEEEECCCeEEEEECCCceEEEec---Ccc----CCeE-EEEEecCCCEEEEEecCCeEEEE-Ec
Q 010754 274 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLS---KHK----GPIF-SLKWNKKGDYLLTGSCDKTAIVW-DV 344 (502)
Q Consensus 274 ~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~----~~v~-~l~~~~~~~~l~s~~~d~~i~~w-d~ 344 (502)
..+|..+-..|||+.++.-+. ..+.++++.......-+ ... ..|+ .+..-..|..+++++.||.|.-| |+
T Consensus 220 ~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQWFdv 298 (733)
T COG4590 220 FSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQWFDV 298 (733)
T ss_pred ccchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeeeeee
Confidence 456778888999998887765 77888886644332111 101 1122 12223356778899999999888 55
Q ss_pred CCCc-----eEEEEeeccCCeEEEEecC-CCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeC
Q 010754 345 KTEE-----WKQQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD 418 (502)
Q Consensus 345 ~~~~-----~~~~~~~~~~~v~~v~~~~-~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~ 418 (502)
+.+. .++.++....++..+.-.. ...|++-...|++.++.....+++-.-. --..+..+++||++.+|++-.
T Consensus 299 r~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~-~~~~~~~~~~Sp~~~~Ll~e~- 376 (733)
T COG4590 299 RRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFER-AYQAPQLVAMSPNQAYLLSED- 376 (733)
T ss_pred ecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehhh-hhcCcceeeeCcccchheeec-
Confidence 4332 1222333333333333322 2337777788888777665554432222 223566789999999998754
Q ss_pred CCcEEEEECCCCeeE
Q 010754 419 DVTAKIWNMKQDKYV 433 (502)
Q Consensus 419 dg~i~iwd~~~~~~~ 433 (502)
.|.|+++.+.+..+.
T Consensus 377 ~gki~~~~l~Nr~Pe 391 (733)
T COG4590 377 QGKIRLAQLENRNPE 391 (733)
T ss_pred CCceEEEEecCCCCC
Confidence 467999988765543
No 465
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=86.94 E-value=23 Score=37.45 Aligned_cols=43 Identities=21% Similarity=0.182 Sum_probs=30.7
Q ss_pred CCCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCcc
Q 010754 204 PNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSN 250 (502)
Q Consensus 204 ~~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~ 250 (502)
-++.+..|.||. |.+++.+.+-.+++| .+|.|.-|-+......
T Consensus 219 iPkrV~gL~gh~--~~qisvs~~HslvLT--~~g~Vys~GlN~~hqL 261 (1267)
T KOG0783|consen 219 IPKRVPGLIGHK--VIQISVSHTHSLVLT--KFGSVYSWGLNGSHQL 261 (1267)
T ss_pred cccccccccccc--eEEEEeecceeEEEe--ecceEEEeecCccccc
Confidence 344555677776 788888877666554 6899999998875543
No 466
>PLN02153 epithiospecifier protein
Probab=86.35 E-value=32 Score=33.07 Aligned_cols=145 Identities=8% Similarity=0.020 Sum_probs=70.5
Q ss_pred CCCEEEEEECC-----CeEEEEECCCceEEEecCc-----cCC--eEEEEEecCCCEEEEEecC-----------CeEEE
Q 010754 285 EGTLLATGSYD-----GQARIWSTNGDLKCTLSKH-----KGP--IFSLKWNKKGDYLLTGSCD-----------KTAIV 341 (502)
Q Consensus 285 ~g~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~-----~~~--v~~l~~~~~~~~l~s~~~d-----------~~i~~ 341 (502)
++++++.|+.+ ..+.+||.....-..+... ..+ -.+++. -+++.++.|+.+ ..+.+
T Consensus 85 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~p~~R~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~v~~ 163 (341)
T PLN02153 85 GTKLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGPEARTFHSMAS-DENHVYVFGGVSKGGLMKTPERFRTIEA 163 (341)
T ss_pred CCEEEEECCCCCCCccCcEEEEECCCCEEEEeccCCCCCCCCCceeeEEEE-ECCEEEEECCccCCCccCCCcccceEEE
Confidence 45677777754 3577888776544433221 111 112222 345566666643 25778
Q ss_pred EEcCCCceEEEEeec----cCCeEEEEecCCCEEEEEeCC-------------CeEEEEEcCCCcceEEE-----ecCCC
Q 010754 342 WDVKTEEWKQQFEFH----SGPTLDVDWRNNVSFATSSTD-------------NMIYVCKIGENRPIKTF-----AGHQG 399 (502)
Q Consensus 342 wd~~~~~~~~~~~~~----~~~v~~v~~~~~~~~~~~~~d-------------~~i~i~d~~~~~~~~~~-----~~h~~ 399 (502)
||..+.++...-... ...-..+....+..++.++.+ ..+.+||..+.+-...- .....
T Consensus 164 yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~gG~~~~~~~~v~~yd~~~~~W~~~~~~g~~P~~r~ 243 (341)
T PLN02153 164 YNIADGKWVQLPDPGENFEKRGGAGFAVVQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWTEVETTGAKPSARS 243 (341)
T ss_pred EECCCCeEeeCCCCCCCCCCCCcceEEEECCeEEEEeccccccccCCccceecCceEEEEcCCCcEEeccccCCCCCCcc
Confidence 898877665421110 001112223344455555432 45788888766432211 11111
Q ss_pred cEEEEEEcCCCCEEEEEeCC--------------CcEEEEECCCCee
Q 010754 400 EVNCVKWDPTGSLLASCSDD--------------VTAKIWNMKQDKY 432 (502)
Q Consensus 400 ~i~~l~~sp~g~~las~s~d--------------g~i~iwd~~~~~~ 432 (502)
...++.+ ++++++.|+.. ..|..+|..+.+.
T Consensus 244 ~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~n~v~~~d~~~~~W 288 (341)
T PLN02153 244 VFAHAVV--GKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETLVW 288 (341)
T ss_pred eeeeEEE--CCEEEEECcccCCccccccccccccccEEEEEcCccEE
Confidence 1222222 46677777741 2567777766543
No 467
>PRK10115 protease 2; Provisional
Probab=86.19 E-value=52 Score=35.26 Aligned_cols=189 Identities=6% Similarity=-0.033 Sum_probs=93.6
Q ss_pred CeEEEEECCCCCEEEEEECC-----CeEEEEECCCce--EEEecCccCCeEEEEEecCCCEEEEEecC------CeEEEE
Q 010754 276 DVTTLDWNGEGTLLATGSYD-----GQARIWSTNGDL--KCTLSKHKGPIFSLKWNKKGDYLLTGSCD------KTAIVW 342 (502)
Q Consensus 276 ~v~~l~~s~~g~~l~s~~~d-----g~i~iwd~~~~~--~~~~~~~~~~v~~l~~~~~~~~l~s~~~d------~~i~~w 342 (502)
.+..+.|+|+|++|+.+... ..|++.|+.+.. ...+. ..-..++|.++++.|+.+..+ ..|+.+
T Consensus 128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~---~~~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h 204 (686)
T PRK10115 128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLD---NVEPSFVWANDSWTFYYVRKHPVTLLPYQVWRH 204 (686)
T ss_pred EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCcccc---CcceEEEEeeCCCEEEEEEecCCCCCCCEEEEE
Confidence 47788999999988876433 357888876443 11111 112569999999877655432 368888
Q ss_pred EcCCC--ceEEEEeeccCCeEEEEe-c-CCCEEEEE---eCCCeEEEEEcC--CCcceEEEecCCCcEEEEEEcCCCCEE
Q 010754 343 DVKTE--EWKQQFEFHSGPTLDVDW-R-NNVSFATS---STDNMIYVCKIG--ENRPIKTFAGHQGEVNCVKWDPTGSLL 413 (502)
Q Consensus 343 d~~~~--~~~~~~~~~~~~v~~v~~-~-~~~~~~~~---~~d~~i~i~d~~--~~~~~~~~~~h~~~i~~l~~sp~g~~l 413 (502)
++.++ +-...+........-..+ + ++..++.. ..++.+.+++.. .+.+...+....+....+. +..+.++
T Consensus 205 ~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ly 283 (686)
T PRK10115 205 TIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLD-HYQHRFY 283 (686)
T ss_pred ECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCEEEEE-eCCCEEE
Confidence 88877 333344433333321222 3 33333332 234568888843 3333222322222222332 3233333
Q ss_pred EEEeCC---CcEEEEECC-CCeeEEEeccC-C-CcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 414 ASCSDD---VTAKIWNMK-QDKYVHDLREH-S-KEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 414 as~s~d---g~i~iwd~~-~~~~~~~~~~h-~-~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
+....+ ..|...++. .++. ..+..+ . ..|..+.++.+ . .++....++..+++...
T Consensus 284 ~~tn~~~~~~~l~~~~~~~~~~~-~~l~~~~~~~~i~~~~~~~~-~-------l~~~~~~~g~~~l~~~~ 344 (686)
T PRK10115 284 LRSNRHGKNFGLYRTRVRDEQQW-EELIPPRENIMLEGFTLFTD-W-------LVVEERQRGLTSLRQIN 344 (686)
T ss_pred EEEcCCCCCceEEEecCCCcccC-eEEECCCCCCEEEEEEEECC-E-------EEEEEEeCCEEEEEEEc
Confidence 333222 234333444 2222 233334 2 35777777732 1 23333334555666543
No 468
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=85.63 E-value=5.3 Score=34.19 Aligned_cols=35 Identities=20% Similarity=0.285 Sum_probs=24.7
Q ss_pred CcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 441 KEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 441 ~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
..|.+++|||.|-+ ......|.+.+.++.+.+|..
T Consensus 86 ~~vv~~aWSP~Gl~-~~~rClLavLTs~~~l~l~~~ 120 (173)
T PF12657_consen 86 SQVVSAAWSPSGLG-PNGRCLLAVLTSNGRLSLYGP 120 (173)
T ss_pred ccEEEEEECCCCCC-CCCceEEEEEcCCCeEEEEec
Confidence 36999999999852 234455666677788888753
No 469
>PHA02790 Kelch-like protein; Provisional
Probab=85.40 E-value=22 Score=36.19 Aligned_cols=89 Identities=10% Similarity=-0.011 Sum_probs=44.9
Q ss_pred CCCEEEEEECCC---eEEEEECCCceEEEecCccCCe--EEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeec-cC
Q 010754 285 EGTLLATGSYDG---QARIWSTNGDLKCTLSKHKGPI--FSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH-SG 358 (502)
Q Consensus 285 ~g~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~v--~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~-~~ 358 (502)
+|++.+.||.++ .+..||..............+. .+++ .-++...+.| |.+.+||..+.++...-... ..
T Consensus 362 ~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~-~~~~~IYv~G---G~~e~ydp~~~~W~~~~~m~~~r 437 (480)
T PHA02790 362 NNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCAL-VFGRRLFLVG---RNAEFYCESSNTWTLIDDPIYPR 437 (480)
T ss_pred CCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEE-EECCEEEEEC---CceEEecCCCCcEeEcCCCCCCc
Confidence 577778877653 4677887655444332221111 1121 2244555555 45778998887765432211 11
Q ss_pred CeEEEEecCCCEEEEEeCC
Q 010754 359 PTLDVDWRNNVSFATSSTD 377 (502)
Q Consensus 359 ~v~~v~~~~~~~~~~~~~d 377 (502)
.-..+....+..+++||.+
T Consensus 438 ~~~~~~v~~~~IYviGG~~ 456 (480)
T PHA02790 438 DNPELIIVDNKLLLIGGFY 456 (480)
T ss_pred cccEEEEECCEEEEECCcC
Confidence 1223333455556666543
No 470
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=84.66 E-value=18 Score=33.68 Aligned_cols=93 Identities=17% Similarity=0.331 Sum_probs=57.8
Q ss_pred CcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE------CCCeEEEEECCCceEEE
Q 010754 237 STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS------YDGQARIWSTNGDLKCT 310 (502)
Q Consensus 237 g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~------~dg~i~iwd~~~~~~~~ 310 (502)
..|++||..+.+... ....-.+.|++|.|..+.++++.|. ....+..||..+.....
T Consensus 16 ~~lC~yd~~~~qW~~-----------------~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~ 78 (281)
T PF12768_consen 16 PGLCLYDTDNSQWSS-----------------PGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSS 78 (281)
T ss_pred CEEEEEECCCCEeec-----------------CCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeeee
Confidence 458899987765321 1111246799999997777777775 34578889988777666
Q ss_pred ecCc-----cCCeEEEEEec-CCC-EEEEEe-cCC--eEEEEEcCC
Q 010754 311 LSKH-----KGPIFSLKWNK-KGD-YLLTGS-CDK--TAIVWDVKT 346 (502)
Q Consensus 311 ~~~~-----~~~v~~l~~~~-~~~-~l~s~~-~d~--~i~~wd~~~ 346 (502)
+... .++|..+.+.. ++. ..++|. .++ .|..||-..
T Consensus 79 ~~~~~s~~ipgpv~a~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs~ 124 (281)
T PF12768_consen 79 LGGGSSNSIPGPVTALTFISNDGSNFWVAGRSANGSTFLMKYDGSS 124 (281)
T ss_pred cCCcccccCCCcEEEEEeeccCCceEEEeceecCCCceEEEEcCCc
Confidence 6552 47888888753 333 444443 233 466665433
No 471
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=84.07 E-value=29 Score=30.55 Aligned_cols=48 Identities=25% Similarity=0.441 Sum_probs=35.6
Q ss_pred CEEEEEECCCeEEEEECCC---ceEEEecCccCCeEEEEEecCCCEEEEEec
Q 010754 287 TLLATGSYDGQARIWSTNG---DLKCTLSKHKGPIFSLKWNKKGDYLLTGSC 335 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~ 335 (502)
..|+.+...+.|.+|++.. .....+..- +.|..+.++..|+||+|--.
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv-~~V~~l~y~~~GDYlvTlE~ 79 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFSTV-GRVLQLVYSEAGDYLVTLEE 79 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcch-hheeEEEeccccceEEEEEe
Confidence 4555556678899999773 344555544 78999999999999998543
No 472
>PRK13684 Ycf48-like protein; Provisional
Probab=83.62 E-value=43 Score=32.17 Aligned_cols=97 Identities=7% Similarity=0.084 Sum_probs=57.6
Q ss_pred ccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEE-ecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEE
Q 010754 356 HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTF-AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH 434 (502)
Q Consensus 356 ~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~-~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~ 434 (502)
..+.+.++.+.+++.++..+..|.+..-.-..++.-... ..-...++++.+.++++.++.+ ..|.+++=..+.+..-.
T Consensus 171 ~~g~~~~i~~~~~g~~v~~g~~G~i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~sW~ 249 (334)
T PRK13684 171 AAGVVRNLRRSPDGKYVAVSSRGNFYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLESWS 249 (334)
T ss_pred CcceEEEEEECCCCeEEEEeCCceEEEEcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCCccc
Confidence 345678888888888888788887654211122211112 2234678999999999887765 45766432334333222
Q ss_pred Eecc----CCCcEEEEEEccCCC
Q 010754 435 DLRE----HSKEIYTIRWSPTGS 453 (502)
Q Consensus 435 ~~~~----h~~~i~~v~~sp~g~ 453 (502)
.... ....+.+++|.|++.
T Consensus 250 ~~~~~~~~~~~~l~~v~~~~~~~ 272 (334)
T PRK13684 250 KPIIPEITNGYGYLDLAYRTPGE 272 (334)
T ss_pred cccCCccccccceeeEEEcCCCC
Confidence 2221 223578899999776
No 473
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=83.36 E-value=5 Score=24.18 Aligned_cols=30 Identities=20% Similarity=0.469 Sum_probs=20.1
Q ss_pred cCCCcEEEEEEcCCCCEEEEEeC-C--CcEEEE
Q 010754 396 GHQGEVNCVKWDPTGSLLASCSD-D--VTAKIW 425 (502)
Q Consensus 396 ~h~~~i~~l~~sp~g~~las~s~-d--g~i~iw 425 (502)
..........|+|||+.|+-++. + |...||
T Consensus 6 ~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 6 NSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp -SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred cCCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 34456778899999998876654 4 666665
No 474
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=82.72 E-value=21 Score=34.79 Aligned_cols=108 Identities=10% Similarity=-0.017 Sum_probs=64.7
Q ss_pred EEEEEecCCeEEEEEcCCCceEEEEeecc--CCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCC-CcEEEEE
Q 010754 329 YLLTGSCDKTAIVWDVKTEEWKQQFEFHS--GPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQ-GEVNCVK 405 (502)
Q Consensus 329 ~l~s~~~d~~i~~wd~~~~~~~~~~~~~~--~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~-~~i~~l~ 405 (502)
.+.++..+|.|.-.|..++..+....... ..+..-....++.++.++.++.++.+|..+++.+..+.... ..+..-.
T Consensus 70 ~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~~~~ 149 (370)
T COG1520 70 TVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGKIYVGSWDGKLYALDASTGTLVWSRNVGGSPYYASPP 149 (370)
T ss_pred eEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCeEEEecccceEEEEECCCCcEEEEEecCCCeEEecCc
Confidence 44455677778888887777554332221 11111112226778999999999999999998888777655 1122222
Q ss_pred EcCCCCEEEEEeCCCcEEEEECCCCeeEEEec
Q 010754 406 WDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR 437 (502)
Q Consensus 406 ~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~ 437 (502)
.-.++ .+..++.+|.+...|..+++......
T Consensus 150 v~~~~-~v~~~s~~g~~~al~~~tG~~~W~~~ 180 (370)
T COG1520 150 VVGDG-TVYVGTDDGHLYALNADTGTLKWTYE 180 (370)
T ss_pred EEcCc-EEEEecCCCeEEEEEccCCcEEEEEe
Confidence 22233 33334467788888877777655543
No 475
>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast). It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].
Probab=82.01 E-value=71 Score=33.52 Aligned_cols=210 Identities=16% Similarity=0.169 Sum_probs=0.0
Q ss_pred CCceEEEEEcCCCC---eEEEEeCCCc-EEEEecCCC---CccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC
Q 010754 215 TSEVCACAWSPAGS---LLASGSGDST-ARIWTIADG---TSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 215 ~~~V~~~~~~p~~~---~l~sgs~dg~-v~iw~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~ 287 (502)
+..|.||....... +.+.|-.++. -++-.+..+ ...............++. ...|..+.|.++++
T Consensus 71 t~iV~~~dV~~~~~~~~~~~~glt~rKk~~ll~i~~~~~~~~~~~~~~e~~~~~~~kl--------~~kvv~Ik~~~~~~ 142 (670)
T PF10395_consen 71 TTIVECCDVLEKSDGKKLYCVGLTERKKFKLLLIERKVGSTEDGTVNSETTNEFELKL--------DDKVVGIKFSSDGK 142 (670)
T ss_pred CceEEEEEeEecCCCcEEEEEEEeeCCeeEEEEEEccCccccccccCccccceEEEEc--------ccceEEEEEecCCC
Q ss_pred EEEEEECCCeEEEEEC---------CCceEEEe-cCccCCeEEEEEecCCCEEEEEec-CC---eEEEEEc--CCCceEE
Q 010754 288 LLATGSYDGQARIWST---------NGDLKCTL-SKHKGPIFSLKWNKKGDYLLTGSC-DK---TAIVWDV--KTEEWKQ 351 (502)
Q Consensus 288 ~l~s~~~dg~i~iwd~---------~~~~~~~~-~~~~~~v~~l~~~~~~~~l~s~~~-d~---~i~~wd~--~~~~~~~ 351 (502)
.+++...+|.|.+||. .-...... ..+..-|.....-....++++.+. ++ ..+++.+ .......
T Consensus 143 ~I~vvl~nG~i~~~d~~~~~l~~~~~l~~~~~~~v~ys~fv~~~~~~~~~~~ll~v~~~~~~k~~ykL~~l~~~~~~~~E 222 (670)
T PF10395_consen 143 IIYVVLENGSIQIYDFSENSLEKVPQLKLKSSINVSYSKFVNDFELENGKDLLLTVSQLSNSKLSYKLISLSNESSSIFE 222 (670)
T ss_pred EEEEEEcCCcEEEEeccccccccccccccccccceehhhhhcccccccCCceEEEEEEcCCCcEEEEEEEeccCCcceEE
Q ss_pred E----EeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecC-------CCcEEEEEEcCCCCEEEEEeCCC
Q 010754 352 Q----FEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGH-------QGEVNCVKWDPTGSLLASCSDDV 420 (502)
Q Consensus 352 ~----~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h-------~~~i~~l~~sp~g~~las~s~dg 420 (502)
. .......-..+++..+..+.. .++.|.+|++..-+..+++.-. ...|.-...+++.-+| +.++
T Consensus 223 l~s~~~e~~~~~~s~f~Y~~G~LY~l--~~~~i~~ysip~f~~~~tI~l~~ii~~~~~~~vSl~~~s~nRvLL---s~~n 297 (670)
T PF10395_consen 223 LSSTILENFGLEDSKFCYQFGKLYQL--SKKTISSYSIPNFQIQKTISLPSIIDKESDDLVSLKPPSPNRVLL---SVNN 297 (670)
T ss_pred eehheeccCCcccceEEEeCCEEEEE--eCCEEEEEEcCCceEEEEEEechhhccccccceEeecCCCCeEEE---EcCC
Q ss_pred cEEEEECCCCeeEEEec
Q 010754 421 TAKIWNMKQDKYVHDLR 437 (502)
Q Consensus 421 ~i~iwd~~~~~~~~~~~ 437 (502)
.|++.|+.-...+..+.
T Consensus 298 kIyLld~~~~siLse~~ 314 (670)
T PF10395_consen 298 KIYLLDLKFESILSEFE 314 (670)
T ss_pred EEEEEeehhhhhhhhhh
No 476
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=81.70 E-value=64 Score=32.81 Aligned_cols=115 Identities=14% Similarity=0.102 Sum_probs=63.7
Q ss_pred EEECCCCCEEEEEECCCeEEEEECCCceEEEecCccCC---eEEEEEecCCCEEEEEec-------------CCeEEEEE
Q 010754 280 LDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGP---IFSLKWNKKGDYLLTGSC-------------DKTAIVWD 343 (502)
Q Consensus 280 l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---v~~l~~~~~~~~l~s~~~-------------d~~i~~wd 343 (502)
+...++|.+++... +.+..+|..|+........... =..+.+.|+|++|+.+.. .-.|..+|
T Consensus 153 ~~~l~nG~ll~~~~--~~~~e~D~~G~v~~~~~l~~~~~~~HHD~~~l~nGn~L~l~~~~~~~~~~~~~~~~~D~Ivevd 230 (477)
T PF05935_consen 153 FKQLPNGNLLIGSG--NRLYEIDLLGKVIWEYDLPGGYYDFHHDIDELPNGNLLILASETKYVDEDKDVDTVEDVIVEVD 230 (477)
T ss_dssp EEE-TTS-EEEEEB--TEEEEE-TT--EEEEEE--TTEE-B-S-EEE-TTS-EEEEEEETTEE-TS-EE---S-EEEEE-
T ss_pred eeEcCCCCEEEecC--CceEEEcCCCCEEEeeecCCcccccccccEECCCCCEEEEEeecccccCCCCccEecCEEEEEC
Confidence 55668888877655 8899999888866554332211 345677899999887772 12466677
Q ss_pred cCCCceEEEEeecc---------------------------CCeEEEEecC-CCEEEEEeCC-CeEEEEEcCCCcceEEE
Q 010754 344 VKTEEWKQQFEFHS---------------------------GPTLDVDWRN-NVSFATSSTD-NMIYVCKIGENRPIKTF 394 (502)
Q Consensus 344 ~~~~~~~~~~~~~~---------------------------~~v~~v~~~~-~~~~~~~~~d-~~i~i~d~~~~~~~~~~ 394 (502)
.+|+.+..+.... --+.++.+.+ ++.+++++.. ..|...|.++++....+
T Consensus 231 -~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW~H~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~Wil 309 (477)
T PF05935_consen 231 -PTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDWLHINSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIKWIL 309 (477)
T ss_dssp -TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS--EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-EEEEE
T ss_pred -CCCCEEEEEehHHhCCcccccccccccccccccCCCCCCccccCccEEeCCCCeEEEEcCcceEEEEEECCCCcEEEEe
Confidence 7777766654210 0257777755 5666666654 48888888888777666
Q ss_pred ecC
Q 010754 395 AGH 397 (502)
Q Consensus 395 ~~h 397 (502)
..+
T Consensus 310 g~~ 312 (477)
T PF05935_consen 310 GPP 312 (477)
T ss_dssp S-S
T ss_pred CCC
Confidence 544
No 477
>KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=81.66 E-value=15 Score=36.53 Aligned_cols=89 Identities=20% Similarity=0.119 Sum_probs=53.2
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecC---ccccCCCCeEEEEECCCC---CEE
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKG---RTNEKSKDVTTLDWNGEG---TLL 289 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~l~~s~~g---~~l 289 (502)
-.|..+..++.|..++-.+.+|.+.++=-........+..+...+.+...... ......-.+..++|+|+. ..|
T Consensus 104 feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL 183 (741)
T KOG4460|consen 104 FEVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHL 183 (741)
T ss_pred EEEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceE
Confidence 45888999999999999999997665432211111122222211211111110 011122347788999975 678
Q ss_pred EEEECCCeEEEEECC
Q 010754 290 ATGSYDGQARIWSTN 304 (502)
Q Consensus 290 ~s~~~dg~i~iwd~~ 304 (502)
..-+.|..||+|+..
T Consensus 184 ~iL~sdnviRiy~lS 198 (741)
T KOG4460|consen 184 VLLTSDNVIRIYSLS 198 (741)
T ss_pred EEEecCcEEEEEecC
Confidence 888889999999965
No 478
>PLN02193 nitrile-specifier protein
Probab=81.65 E-value=64 Score=32.75 Aligned_cols=146 Identities=8% Similarity=0.021 Sum_probs=73.7
Q ss_pred CCCEEEEEECC-----CeEEEEECCCceEEEecCc---cCC--eEEEEEecCCCEEEEEecCC-----eEEEEEcCCCce
Q 010754 285 EGTLLATGSYD-----GQARIWSTNGDLKCTLSKH---KGP--IFSLKWNKKGDYLLTGSCDK-----TAIVWDVKTEEW 349 (502)
Q Consensus 285 ~g~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~---~~~--v~~l~~~~~~~~l~s~~~d~-----~i~~wd~~~~~~ 349 (502)
++.+.+.|+.+ ..+.+||+.......+... ..+ -.++.. -+++.++.|+.++ .+..||+.+.++
T Consensus 228 ~~~lYvfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~h~~~~-~~~~iYv~GG~~~~~~~~~~~~yd~~t~~W 306 (470)
T PLN02193 228 GSTLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAA-DEENVYVFGGVSATARLKTLDSYNIVDKKW 306 (470)
T ss_pred CCEEEEECCCCCCCCCccEEEEECCCCEEEEcCcCCCCCCCccceEEEE-ECCEEEEECCCCCCCCcceEEEEECCCCEE
Confidence 45666777755 3577888776544433221 111 112222 2455666666543 467888877765
Q ss_pred EEEEee----ccCCeEEEEecCCCEEEEEeCC----CeEEEEEcCCCcceEEEe-----cCCCcEEEEEEcCCCCEEEEE
Q 010754 350 KQQFEF----HSGPTLDVDWRNNVSFATSSTD----NMIYVCKIGENRPIKTFA-----GHQGEVNCVKWDPTGSLLASC 416 (502)
Q Consensus 350 ~~~~~~----~~~~v~~v~~~~~~~~~~~~~d----~~i~i~d~~~~~~~~~~~-----~h~~~i~~l~~sp~g~~las~ 416 (502)
...-.. ....-..+....+..++.++.+ ..+.+||+.+.+-...-. .......++.+ ++++++.|
T Consensus 307 ~~~~~~~~~~~~R~~~~~~~~~gkiyviGG~~g~~~~dv~~yD~~t~~W~~~~~~g~~P~~R~~~~~~~~--~~~iyv~G 384 (470)
T PLN02193 307 FHCSTPGDSFSIRGGAGLEVVQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAAV--GKHIVIFG 384 (470)
T ss_pred EeCCCCCCCCCCCCCcEEEEECCcEEEEECCCCCccCceEEEECCCCEEEEeccCCCCCCCcceeEEEEE--CCEEEEEC
Confidence 432110 0000112222345566666654 458889988765322111 01111222222 56677777
Q ss_pred eCC--------------CcEEEEECCCCeeE
Q 010754 417 SDD--------------VTAKIWNMKQDKYV 433 (502)
Q Consensus 417 s~d--------------g~i~iwd~~~~~~~ 433 (502)
+.+ ..+.++|..+.+..
T Consensus 385 G~~~~~~~~~~~~~~~~ndv~~~D~~t~~W~ 415 (470)
T PLN02193 385 GEIAMDPLAHVGPGQLTDGTFALDTETLQWE 415 (470)
T ss_pred CccCCccccccCccceeccEEEEEcCcCEEE
Confidence 753 24788888776653
No 479
>KOG2659 consensus LisH motif-containing protein [Cytoskeleton]
Probab=81.64 E-value=0.94 Score=39.86 Aligned_cols=63 Identities=27% Similarity=0.354 Sum_probs=44.4
Q ss_pred CCCcchhhHHHHHHHHhcCCcchhhcccccccCccCCCCCCCCC-chhHHHHHHhhhhhhhhhh
Q 010754 3 SITSEELNYLVFRYLQESGLLHSAFVLGYEAGINKCNIDGNLVP-PRALITFVQKGLQYLEMEA 65 (502)
Q Consensus 3 ~lts~evn~li~rYlqE~g~~~sA~~~~~e~~~~~~~~~~~~ip-~~aLv~l~qkgl~y~~~e~ 65 (502)
++..+++|-||--||---||..+|-+|++|+.+..+.+.-..+- .-....+|+.|=.=..+|.
T Consensus 23 ~~~~~d~n~LVmnylv~eg~~EaA~~Fa~e~~i~~~~~d~~~~~eR~~Ir~~I~~G~Ie~Aie~ 86 (228)
T KOG2659|consen 23 SVMREDLNRLVMNYLVHEGYVEAAEKFAKESGIKPPSIDLDSMDERLQIRRAIEEGQIEEAIEK 86 (228)
T ss_pred CcchhhHHHHHHHHHHhccHHHHHHHhccccCCCCccCchhhHhHHHHHHHHHHhccHHHHHHH
Confidence 57889999999999999999999999999999997533212222 2234445566644444443
No 480
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=81.57 E-value=50 Score=31.46 Aligned_cols=93 Identities=11% Similarity=0.228 Sum_probs=47.6
Q ss_pred CCCEEEEEECC-----CeEEEEECCCceEEEecCcc--CCeEEEEEecCCCEEEEEecCC----eEEEEEcCCCceEEEE
Q 010754 285 EGTLLATGSYD-----GQARIWSTNGDLKCTLSKHK--GPIFSLKWNKKGDYLLTGSCDK----TAIVWDVKTEEWKQQF 353 (502)
Q Consensus 285 ~g~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~--~~v~~l~~~~~~~~l~s~~~d~----~i~~wd~~~~~~~~~~ 353 (502)
++++.+.|+.. ..+..||+.......+.... ......+..-+++..+.|+.++ .+.+||..+.++...-
T Consensus 123 ~~~iYv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~W~~~~ 202 (323)
T TIGR03548 123 DGTLYVGGGNRNGKPSNKSYLFNLETQEWFELPDFPGEPRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQWQKVA 202 (323)
T ss_pred CCEEEEEeCcCCCccCceEEEEcCCCCCeeECCCCCCCCCCcceEEEECCEEEEEcCCCCccccceEEEecCCCeeEECC
Confidence 46666777642 35778887755444333211 1112222233566777777654 3568898887764322
Q ss_pred eec--cCC-----eEEEEecCCCEEEEEeCC
Q 010754 354 EFH--SGP-----TLDVDWRNNVSFATSSTD 377 (502)
Q Consensus 354 ~~~--~~~-----v~~v~~~~~~~~~~~~~d 377 (502)
... ..+ ...+....+..++.|+.+
T Consensus 203 ~~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~ 233 (323)
T TIGR03548 203 DPTTDSEPISLLGAASIKINESLLLCIGGFN 233 (323)
T ss_pred CCCCCCCceeccceeEEEECCCEEEEECCcC
Confidence 110 011 122333455667777765
No 481
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=81.30 E-value=87 Score=34.10 Aligned_cols=169 Identities=12% Similarity=0.111 Sum_probs=96.0
Q ss_pred CCCceEEEEEc---C--C--CCeEEEEeCCCcEEEEecCCCCccC--CCCCCCceeEEEeeecCccccCCCCeEEEEECC
Q 010754 214 HTSEVCACAWS---P--A--GSLLASGSGDSTARIWTIADGTSNG--GAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 284 (502)
Q Consensus 214 H~~~V~~~~~~---p--~--~~~l~sgs~dg~v~iw~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~ 284 (502)
-..+|..|+|. . + ..+|++= ....+.|+...-.+... ......+....+..+..... ...+...++|+|
T Consensus 78 ~~~PI~qI~fa~~~~~~~~~~~~l~Vr-t~~st~I~~p~~~~~~~~~~~~~s~i~~~~l~~i~~~~t-gg~~~aDv~FnP 155 (765)
T PF10214_consen 78 DGSPIKQIKFATLSESFDEKSRWLAVR-TETSTTILRPEYHRVISSIRSRPSRIDPNPLLTISSSDT-GGFPHADVAFNP 155 (765)
T ss_pred CCCCeeEEEecccccccCCcCcEEEEE-cCCEEEEEEcccccccccccCCccccccceeEEechhhc-CCCccceEEecc
Confidence 45778888887 3 1 2355544 44667777622111100 00111112222222222211 234678999998
Q ss_pred -CCCEEEEEECCCeEEEEECCC------ceEEEecCccC----------CeEEEEEecCCCEEEEEecCCeEEEEEcCCC
Q 010754 285 -EGTLLATGSYDGQARIWSTNG------DLKCTLSKHKG----------PIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE 347 (502)
Q Consensus 285 -~g~~l~s~~~dg~i~iwd~~~------~~~~~~~~~~~----------~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~ 347 (502)
+...||+....|...||++.+ ........+.+ .-..+.|.++.+.|++++. ..+.++|+.+.
T Consensus 156 ~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r-~~l~~~d~~~~ 234 (765)
T PF10214_consen 156 WDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNR-SKLMLIDFESN 234 (765)
T ss_pred CccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcC-CceEEEECCCC
Confidence 566999999999999999821 11111111122 2347889888788888754 57899999877
Q ss_pred ceEEEE--eeccCCeEEEEecCC---CEEEEEeCCCeEEEEEcCC
Q 010754 348 EWKQQF--EFHSGPTLDVDWRNN---VSFATSSTDNMIYVCKIGE 387 (502)
Q Consensus 348 ~~~~~~--~~~~~~v~~v~~~~~---~~~~~~~~d~~i~i~d~~~ 387 (502)
.....+ ......|.++.-++. ..|+. +...|...++..
T Consensus 235 ~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiL--Ts~eiiw~~~~~ 277 (765)
T PF10214_consen 235 WQTEYLVTAKTWSWILDVKRSPDNPSHVFIL--TSKEIIWLDVKS 277 (765)
T ss_pred CccchhccCCChhheeeEEecCCccceEEEE--ecCeEEEEEccC
Confidence 653311 223456888887666 33444 336777777776
No 482
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=80.76 E-value=10 Score=23.08 Aligned_cols=31 Identities=19% Similarity=0.158 Sum_probs=23.8
Q ss_pred cCCCEEEEEe-cCCeEEEEEcCCCceEEEEee
Q 010754 325 KKGDYLLTGS-CDKTAIVWDVKTEEWKQQFEF 355 (502)
Q Consensus 325 ~~~~~l~s~~-~d~~i~~wd~~~~~~~~~~~~ 355 (502)
|++++|+++. .+++|.++|..+++.+..+..
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v 32 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV 32 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC
Confidence 5677666655 478999999998888777765
No 483
>KOG3616 consensus Selective LIM binding factor [Transcription]
Probab=79.35 E-value=5.8 Score=41.03 Aligned_cols=67 Identities=18% Similarity=0.343 Sum_probs=48.2
Q ss_pred CCeEEEEECCCCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEE
Q 010754 275 KDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWD 343 (502)
Q Consensus 275 ~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd 343 (502)
..++++.-+|.|+.++.+..||.|++|+........+.....|-..+.|...| |+++.+|+.+.-|.
T Consensus 15 e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qski~~~~~p~~nlv~tnhg--l~~~tsdrr~la~~ 81 (1636)
T KOG3616|consen 15 EFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSKICEEAKPKENLVFTNHG--LVTATSDRRALAWK 81 (1636)
T ss_pred ceeeeeeecCCCceEEEEecCCcEEEEeecccchhhhhhhcCCccceeeeccc--eEEEeccchhheee
Confidence 45788888999999999999999999996544333333333455566665444 67777788888886
No 484
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=78.56 E-value=7.8 Score=37.75 Aligned_cols=170 Identities=15% Similarity=0.107 Sum_probs=96.9
Q ss_pred eEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCcccc-CCCCeE-EEEECCC
Q 010754 208 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNE-KSKDVT-TLDWNGE 285 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~-~l~~s~~ 285 (502)
++.|..-...|..+-..|||+.|..-+. .++.++++.+...... .+.....+ ....|+ .+..-..
T Consensus 213 i~~L~~~~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~r------------kl~~dspg~~~~~Vte~l~lL~G 279 (733)
T COG4590 213 IRLLSVPFSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIR------------KLVDDSPGDSRHQVTEQLYLLSG 279 (733)
T ss_pred hhhcCCCccchHhhEECCCCCEEEEecC-CeEEEEeecccccchh------------hhhhcCCCchHHHHHHHHHHHhC
Confidence 3344455577888899999998877766 7899999887543211 00000000 001122 1222345
Q ss_pred CCEEEEEECCCeEEEE-ECCC--c----eEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccC
Q 010754 286 GTLLATGSYDGQARIW-STNG--D----LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSG 358 (502)
Q Consensus 286 g~~l~s~~~dg~i~iw-d~~~--~----~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~ 358 (502)
|..+++++.||.|.-| |+.. . ....++-...++..+.-..+.+-+++-+..|++.++.....+.+. +..--.
T Consensus 280 g~SLLv~~~dG~vsQWFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL-~~~~~~ 358 (733)
T COG4590 280 GFSLLVVHEDGLVSQWFDVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLL-FERAYQ 358 (733)
T ss_pred ceeEEEEcCCCceeeeeeeecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCccee-hhhhhc
Confidence 6678889999999877 4331 1 112222222334433322334567777778888877654433322 222223
Q ss_pred CeEEEEecCCCEEEEEeCCCeEEEEEcCCCcce
Q 010754 359 PTLDVDWRNNVSFATSSTDNMIYVCKIGENRPI 391 (502)
Q Consensus 359 ~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~ 391 (502)
.+.-++++|+...+..-..|.|+++.+.+..+-
T Consensus 359 ~~~~~~~Sp~~~~Ll~e~~gki~~~~l~Nr~Pe 391 (733)
T COG4590 359 APQLVAMSPNQAYLLSEDQGKIRLAQLENRNPE 391 (733)
T ss_pred CcceeeeCcccchheeecCCceEEEEecCCCCC
Confidence 455677888777777778889999988776543
No 485
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=78.21 E-value=9.7 Score=22.88 Aligned_cols=30 Identities=23% Similarity=0.410 Sum_probs=18.9
Q ss_pred cCCCceEEEEEcCCCCeEEEEe-CC--CcEEEE
Q 010754 213 GHTSEVCACAWSPAGSLLASGS-GD--STARIW 242 (502)
Q Consensus 213 ~H~~~V~~~~~~p~~~~l~sgs-~d--g~v~iw 242 (502)
.....-....|+|||+.|+-++ .+ |.-.||
T Consensus 6 ~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 6 NSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp -SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred cCCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 3445667889999998766554 44 555555
No 486
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=78.16 E-value=75 Score=31.51 Aligned_cols=58 Identities=14% Similarity=0.067 Sum_probs=42.7
Q ss_pred CEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEc
Q 010754 287 TLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDV 344 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~ 344 (502)
.+|++=+-||.+.+|+-+.-....+....--.-.++|.+..+.|++++.+..+..|..
T Consensus 146 ~~IcVQS~DG~L~~feqe~~~f~~~lp~~llPgPl~Y~~~tDsfvt~sss~~l~~Yky 203 (418)
T PF14727_consen 146 DFICVQSMDGSLSFFEQESFAFSRFLPDFLLPGPLCYCPRTDSFVTASSSWTLECYKY 203 (418)
T ss_pred eEEEEEecCceEEEEeCCcEEEEEEcCCCCCCcCeEEeecCCEEEEecCceeEEEecH
Confidence 5788888999999999776553333332223345788888899999999999998864
No 487
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=77.82 E-value=63 Score=30.41 Aligned_cols=87 Identities=14% Similarity=0.172 Sum_probs=62.4
Q ss_pred EEEecCCCEEEEEeCCCeEEEEEcCCCcc--eEEEecCCCcEEEEEEcCCCCEEEEEeC----C----------------
Q 010754 362 DVDWRNNVSFATSSTDNMIYVCKIGENRP--IKTFAGHQGEVNCVKWDPTGSLLASCSD----D---------------- 419 (502)
Q Consensus 362 ~v~~~~~~~~~~~~~d~~i~i~d~~~~~~--~~~~~~h~~~i~~l~~sp~g~~las~s~----d---------------- 419 (502)
+-.|..+...++-+..|.+.-+|..+++. +..+. +...++.|. |.++++|-. +
T Consensus 207 SPRWhdgrLwvldsgtGev~~vD~~~G~~e~Va~vp---G~~rGL~f~--G~llvVgmSk~R~~~~f~glpl~~~l~~~~ 281 (335)
T TIGR03032 207 SPRWYQGKLWLLNSGRGELGYVDPQAGKFQPVAFLP---GFTRGLAFA--GDFAFVGLSKLRESRVFGGLPIEERLDALG 281 (335)
T ss_pred CCcEeCCeEEEEECCCCEEEEEcCCCCcEEEEEECC---CCCccccee--CCEEEEEeccccCCCCcCCCchhhhhhhhc
Confidence 34566777788888899999999877754 43333 456778887 777766532 1
Q ss_pred CcEEEEECCCCeeEEEec--cCCCcEEEEEEccCCC
Q 010754 420 VTAKIWNMKQDKYVHDLR--EHSKEIYTIRWSPTGS 453 (502)
Q Consensus 420 g~i~iwd~~~~~~~~~~~--~h~~~i~~v~~sp~g~ 453 (502)
.-|.|-|+++|..++.++ +.-..|++++.-|.-.
T Consensus 282 CGv~vidl~tG~vv~~l~feg~v~EifdV~vLPg~r 317 (335)
T TIGR03032 282 CGVAVIDLNSGDVVHWLRFEGVIEEIYDVAVLPGVR 317 (335)
T ss_pred ccEEEEECCCCCEEEEEEeCCceeEEEEEEEecCCC
Confidence 237888999999988766 4456789999998744
No 488
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=77.51 E-value=92 Score=32.94 Aligned_cols=159 Identities=19% Similarity=0.261 Sum_probs=86.2
Q ss_pred CCCeEEEEECCCCCEEEEEECCCe--EEEE--ECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCce
Q 010754 274 SKDVTTLDWNGEGTLLATGSYDGQ--ARIW--STNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEW 349 (502)
Q Consensus 274 ~~~v~~l~~s~~g~~l~s~~~dg~--i~iw--d~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~ 349 (502)
...+..+.|+|+|..++..+.++. ..+| +..+ ....+...+....|+|.++.++....++..+. .+.
T Consensus 59 ~~~~~~~~~spdg~~~~~~~~~~~~~~~l~l~~~~g----~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~----~~~- 129 (620)
T COG1506 59 GGGVSELRWSPDGSVLAFVSTDGGRVAQLYLVDVGG----LITKTAFGVSDARWSPDGDRIAFLTAEGASKR----DGG- 129 (620)
T ss_pred CCcccccccCCCCCEEEEEeccCCCcceEEEEecCC----ceeeeecccccceeCCCCCeEEEEeccccccc----CCc-
Confidence 456888899999999998884432 3333 3332 34455677888999999998887222221110 010
Q ss_pred EEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCc-------E
Q 010754 350 KQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVT-------A 422 (502)
Q Consensus 350 ~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~-------i 422 (502)
..+.. .-..+-|...+ .....+.+.|..+ ...........+....++++++.++....+.. .
T Consensus 130 -~~~~~---~~~~~~~~~~g-----~~~~~l~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (620)
T COG1506 130 -DHLFV---DRLPVWFDGRG-----GERSDLYVVDIES--KLIKLGLGNLDVVSFATDGDGRLVASIRLDDDADPWVTNL 198 (620)
T ss_pred -eeeee---cccceeecCCC-----CcccceEEEccCc--ccccccCCCCceeeeeeCCCCceeEEeeeccccCCceEee
Confidence 00000 00000011111 2233455555544 33333445566777778877777776655432 3
Q ss_pred EEEECCCCeeEEEeccCCCcEEEEEEccCCC
Q 010754 423 KIWNMKQDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 423 ~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
.++...++.. ..+......+..+.|.++|.
T Consensus 199 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~gk 228 (620)
T COG1506 199 YVLIEGNGEL-ESLTPGEGSISKLAFDADGK 228 (620)
T ss_pred EEEecCCCce-EEEcCCCceeeeeeeCCCCC
Confidence 3343333333 34444555688899999987
No 489
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=77.38 E-value=83 Score=31.59 Aligned_cols=66 Identities=11% Similarity=0.110 Sum_probs=40.0
Q ss_pred EeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCcc-ccCCCCeEEEEECCCC
Q 010754 210 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRT-NEKSKDVTTLDWNGEG 286 (502)
Q Consensus 210 ~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~l~~s~~g 286 (502)
++...-..-+.|+|.|+|++|++--..|.|++++-.++.... ...+.... .........|+++|+-
T Consensus 24 ~va~GL~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~-----------~~~l~~v~~~~ge~GLlglal~PdF 90 (454)
T TIGR03606 24 VLLSGLNKPWALLWGPDNQLWVTERATGKILRVNPETGEVKV-----------VFTLPEIVNDAQHNGLLGLALHPDF 90 (454)
T ss_pred EEECCCCCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceee-----------eecCCceeccCCCCceeeEEECCCc
Confidence 344444567899999999888776556999998754432110 00011000 1124668999999874
No 490
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=77.15 E-value=82 Score=31.39 Aligned_cols=30 Identities=23% Similarity=0.502 Sum_probs=25.4
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 010754 400 EVNCVKWDPTGSLLASCSDDVTAKIWNMKQ 429 (502)
Q Consensus 400 ~i~~l~~sp~g~~las~s~dg~i~iwd~~~ 429 (502)
.|.+++..+..++|++.+.+|.|.+|++..
T Consensus 191 ~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~ 220 (422)
T PF08801_consen 191 KIVQVAVDPSRRLLYTLTSDGSIQVWDLGP 220 (422)
T ss_dssp -EEEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred ceeeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence 499999999999999999999999999974
No 491
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=74.98 E-value=1.3e+02 Score=32.67 Aligned_cols=87 Identities=15% Similarity=0.042 Sum_probs=53.7
Q ss_pred cCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEE
Q 010754 315 KGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTF 394 (502)
Q Consensus 315 ~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~ 394 (502)
...|.++....-+..++.+-.||+|.++|-.+.+.+............ ++ .+.+. -..|
T Consensus 259 ~~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~---------v~-------s~~~~-----Gf~f 317 (753)
T PF11635_consen 259 NKRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNT---------VT-------SLFQA-----GFHF 317 (753)
T ss_pred CCeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccc---------cc-------ccccc-----cccc
Confidence 345777777777788999999999999998887655443000000000 00 00000 0111
Q ss_pred ecCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q 010754 395 AGHQGEVNCVKWDPTGSLLASCSDDVTAK 423 (502)
Q Consensus 395 ~~h~~~i~~l~~sp~g~~las~s~dg~i~ 423 (502)
. +...+..++|||++.-++.-..+|.+.
T Consensus 318 p-~~~~~~~vafSPt~c~~v~~~~~~~~~ 345 (753)
T PF11635_consen 318 P-CIQPPLHVAFSPTMCSLVQIDEDGKTK 345 (753)
T ss_pred c-cCCCCceEEECcccceEEEEecCCCce
Confidence 1 112566799999999999999998866
No 492
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=74.40 E-value=89 Score=30.47 Aligned_cols=183 Identities=10% Similarity=0.062 Sum_probs=103.0
Q ss_pred CCCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEe----cCCCE--EEEEe-cC---CeEEEEEcC--CCceEE
Q 010754 284 GEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWN----KKGDY--LLTGS-CD---KTAIVWDVK--TEEWKQ 351 (502)
Q Consensus 284 ~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~----~~~~~--l~s~~-~d---~~i~~wd~~--~~~~~~ 351 (502)
|...+++.....+-+.+||++++.+..+.. +.+..+..- -.|+. |++++ .+ .+|++|.+. ++. +.
T Consensus 66 p~kSlIigTdK~~GL~VYdL~Gk~lq~~~~--Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~-L~ 142 (381)
T PF02333_consen 66 PAKSLIIGTDKKGGLYVYDLDGKELQSLPV--GRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGE-LT 142 (381)
T ss_dssp GGG-EEEEEETTTEEEEEETTS-EEEEE-S--S-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTE-EE
T ss_pred cccceEEEEeCCCCEEEEcCCCcEEEeecC--CCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCc-ce
Confidence 345688888888999999999999887753 333433321 13432 33333 32 479999775 333 33
Q ss_pred EEee-------ccCCeEEEEe--cC-CC--EEEEEeCCCeEEEEEcC---CC----cceEEEecCCCcEEEEEEcCCCCE
Q 010754 352 QFEF-------HSGPTLDVDW--RN-NV--SFATSSTDNMIYVCKIG---EN----RPIKTFAGHQGEVNCVKWDPTGSL 412 (502)
Q Consensus 352 ~~~~-------~~~~v~~v~~--~~-~~--~~~~~~~d~~i~i~d~~---~~----~~~~~~~~h~~~i~~l~~sp~g~~ 412 (502)
.+.. ....+..+|. ++ .+ ..++...+|.+..|.+. .+ +.++.|.. .+.+-.|..+....+
T Consensus 143 ~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~-~sQ~EGCVVDDe~g~ 221 (381)
T PF02333_consen 143 DVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKV-GSQPEGCVVDDETGR 221 (381)
T ss_dssp E-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE--SS-EEEEEEETTTTE
T ss_pred EcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecC-CCcceEEEEecccCC
Confidence 3321 1123566776 22 22 35567788998888774 22 35677764 457889999988889
Q ss_pred EEEEeCCCcEEEEECCC-----CeeEEEecc--CCCcEEEEEEccCCCCCCCCCccEEEEeecC--ceEEEE
Q 010754 413 LASCSDDVTAKIWNMKQ-----DKYVHDLRE--HSKEIYTIRWSPTGSGTNNPNQQLILARLIP--YFLYWI 475 (502)
Q Consensus 413 las~s~dg~i~iwd~~~-----~~~~~~~~~--h~~~i~~v~~sp~g~~~~~~~~~l~las~~~--~~~iw~ 475 (502)
|..|-++--|.-|+... +..+....+ ....|-.|+.-..+. +..+ +++|+-+ ...+|.
T Consensus 222 LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~----g~gY-LivSsQG~~sf~Vy~ 288 (381)
T PF02333_consen 222 LYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSD----GKGY-LIVSSQGDNSFAVYD 288 (381)
T ss_dssp EEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CC----C-EE-EEEEEGGGTEEEEEE
T ss_pred EEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCC----CCeE-EEEEcCCCCeEEEEe
Confidence 99999987777777642 233333322 345677887754321 1134 4555543 466664
No 493
>KOG2727 consensus Rab3 GTPase-activating protein, non-catalytic subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=73.22 E-value=37 Score=36.44 Aligned_cols=37 Identities=24% Similarity=0.398 Sum_probs=30.0
Q ss_pred EEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEe
Q 010754 288 LLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWN 324 (502)
Q Consensus 288 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~ 324 (502)
.+++|..+|.|++|..+|.....-..|..+|..+++-
T Consensus 102 cVavGt~sGyV~FYTe~Gvllf~Q~~~edPVl~lk~r 138 (1244)
T KOG2727|consen 102 CVAVGTSSGYVLFYTETGVLLFKQIVHEDPVLKLKVR 138 (1244)
T ss_pred EEEEecccceEEEEecccHHHHHHHhccCccceEEEE
Confidence 4899999999999998886555556678888888774
No 494
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=72.88 E-value=90 Score=29.84 Aligned_cols=56 Identities=20% Similarity=0.204 Sum_probs=33.5
Q ss_pred CCcEEEEEEcCCCCEEEEEeC-----CC--c-------EEEEE--CCC-Cee----EEEecc-----CCCcEEEEEEccC
Q 010754 398 QGEVNCVKWDPTGSLLASCSD-----DV--T-------AKIWN--MKQ-DKY----VHDLRE-----HSKEIYTIRWSPT 451 (502)
Q Consensus 398 ~~~i~~l~~sp~g~~las~s~-----dg--~-------i~iwd--~~~-~~~----~~~~~~-----h~~~i~~v~~sp~ 451 (502)
+..+-+|+++|+|+.|+++.+ |+ . ++|+. ..+ +.. ...+.. ....|..+.+-++
T Consensus 146 N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d 225 (326)
T PF13449_consen 146 NRGFEGLAVSPDGRTLFAAMESPLKQDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPD 225 (326)
T ss_pred CCCeEEEEECCCCCEEEEEECccccCCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECC
Confidence 456778899999886655543 22 1 45554 433 222 222222 3456899999999
Q ss_pred CC
Q 010754 452 GS 453 (502)
Q Consensus 452 g~ 453 (502)
+.
T Consensus 226 ~~ 227 (326)
T PF13449_consen 226 GR 227 (326)
T ss_pred Cc
Confidence 87
No 495
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=70.28 E-value=1.1e+02 Score=29.82 Aligned_cols=195 Identities=14% Similarity=0.165 Sum_probs=103.2
Q ss_pred CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCE--EEEEE-CC---CeEE
Q 010754 226 AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL--LATGS-YD---GQAR 299 (502)
Q Consensus 226 ~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~--l~s~~-~d---g~i~ 299 (502)
..++++...+++-+.+||+...... .+..+..+-.. -...+.+ .|+. |++++ .+ ..|+
T Consensus 67 ~kSlIigTdK~~GL~VYdL~Gk~lq-~~~~Gr~NNVD-------------vrygf~l--~g~~vDlavas~R~~g~n~l~ 130 (381)
T PF02333_consen 67 AKSLIIGTDKKGGLYVYDLDGKELQ-SLPVGRPNNVD-------------VRYGFPL--NGKTVDLAVASDRSDGRNSLR 130 (381)
T ss_dssp GG-EEEEEETTTEEEEEETTS-EEE-EE-SS-EEEEE-------------EEEEEEE--TTEEEEEEEEEE-CCCT-EEE
T ss_pred ccceEEEEeCCCCEEEEcCCCcEEE-eecCCCcceee-------------eecceec--CCceEEEEEEecCcCCCCeEE
Confidence 4567777788889999999865421 11111111000 0122223 2332 34443 32 4699
Q ss_pred EEECCC--ceEEEecC-------ccCCeEEEEEe--c-CCC-EEEEEecCCeEEEEEcC---CC----ceEEEEeeccCC
Q 010754 300 IWSTNG--DLKCTLSK-------HKGPIFSLKWN--K-KGD-YLLTGSCDKTAIVWDVK---TE----EWKQQFEFHSGP 359 (502)
Q Consensus 300 iwd~~~--~~~~~~~~-------~~~~v~~l~~~--~-~~~-~l~s~~~d~~i~~wd~~---~~----~~~~~~~~~~~~ 359 (502)
+|.++. ..+..+.. .-..++.+|+- + +|. ++++...+|.+..|-+. .+ +.++.|...+ .
T Consensus 131 ~f~id~~~g~L~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~s-Q 209 (381)
T PF02333_consen 131 LFRIDPDTGELTDVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVGS-Q 209 (381)
T ss_dssp EEEEETTTTEEEE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS--
T ss_pred EEEecCCCCcceEcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCCC-c
Confidence 997652 33333221 11346788874 3 344 66677889988888774 23 3466666433 5
Q ss_pred eEEEEe-cCCCEEEEEeCCCeEEEEEcCCCc-----ceEEEec--CCCcEEEEEEcC--CC--CEEEEEeCCCcEEEEEC
Q 010754 360 TLDVDW-RNNVSFATSSTDNMIYVCKIGENR-----PIKTFAG--HQGEVNCVKWDP--TG--SLLASCSDDVTAKIWNM 427 (502)
Q Consensus 360 v~~v~~-~~~~~~~~~~~d~~i~i~d~~~~~-----~~~~~~~--h~~~i~~l~~sp--~g--~~las~s~dg~i~iwd~ 427 (502)
+-.+.. ...+.+..+-.+.-|.-|+..... .+....+ ....|-.|++-. ++ -+|+|.-.+++..||+.
T Consensus 210 ~EGCVVDDe~g~LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~r 289 (381)
T PF02333_consen 210 PEGCVVDDETGRLYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYDR 289 (381)
T ss_dssp EEEEEEETTTTEEEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEES
T ss_pred ceEEEEecccCCEEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEec
Confidence 555555 345678888889888888886332 2222222 245677777643 33 34555556889999997
Q ss_pred CC-CeeEEEec
Q 010754 428 KQ-DKYVHDLR 437 (502)
Q Consensus 428 ~~-~~~~~~~~ 437 (502)
.. ...+..|.
T Consensus 290 ~~~~~~~g~f~ 300 (381)
T PF02333_consen 290 EGPNAYVGSFR 300 (381)
T ss_dssp STT--EEEEEE
T ss_pred CCCCcccceEE
Confidence 64 34455543
No 496
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=69.96 E-value=12 Score=21.28 Aligned_cols=25 Identities=16% Similarity=0.041 Sum_probs=20.6
Q ss_pred EEEEEeCCCcEEEEECCCCeeEEEe
Q 010754 412 LLASCSDDVTAKIWNMKQDKYVHDL 436 (502)
Q Consensus 412 ~las~s~dg~i~iwd~~~~~~~~~~ 436 (502)
.++.++.+|.+..+|..+|+.+..+
T Consensus 8 ~v~~~~~~g~l~a~d~~~G~~~W~~ 32 (33)
T smart00564 8 TVYVGSTDGTLYALDAKTGEILWTY 32 (33)
T ss_pred EEEEEcCCCEEEEEEcccCcEEEEc
Confidence 5777888999999999998876543
No 497
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=69.56 E-value=41 Score=25.04 Aligned_cols=42 Identities=7% Similarity=-0.002 Sum_probs=29.3
Q ss_pred ECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEe
Q 010754 293 SYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGS 334 (502)
Q Consensus 293 ~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~ 334 (502)
..+|.+..||..++....+...-.--..+++++++.+++.+-
T Consensus 34 ~~~GRll~ydp~t~~~~vl~~~L~fpNGVals~d~~~vlv~E 75 (89)
T PF03088_consen 34 RPTGRLLRYDPSTKETTVLLDGLYFPNGVALSPDESFVLVAE 75 (89)
T ss_dssp ---EEEEEEETTTTEEEEEEEEESSEEEEEE-TTSSEEEEEE
T ss_pred CCCcCEEEEECCCCeEEEehhCCCccCeEEEcCCCCEEEEEe
Confidence 346888889988877666555555678999999999877653
No 498
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=67.95 E-value=35 Score=30.05 Aligned_cols=64 Identities=14% Similarity=0.185 Sum_probs=44.1
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEEcC--CCcceEEEecCCCcEEEEEEcCCCCEEEEEeCC---C---cEEEE
Q 010754 361 LDVDWRNNVSFATSSTDNMIYVCKIG--ENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD---V---TAKIW 425 (502)
Q Consensus 361 ~~v~~~~~~~~~~~~~d~~i~i~d~~--~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~d---g---~i~iw 425 (502)
..++-...+.+..+...+.|.+|++. ..+++.+|. .-+.|..+.++..|+||+|-=.+ . .+|+|
T Consensus 21 ~~~c~~g~d~Lfva~~g~~Vev~~l~~~~~~~~~~F~-Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y 92 (215)
T PF14761_consen 21 TAVCCGGPDALFVAASGCKVEVYDLEQEECPLLCTFS-TVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAY 92 (215)
T ss_pred ceeeccCCceEEEEcCCCEEEEEEcccCCCceeEEEc-chhheeEEEeccccceEEEEEeecCCccceEEEEE
Confidence 34444443444444677889999988 334566776 44889999999999999986432 2 56775
No 499
>PLN02153 epithiospecifier protein
Probab=67.73 E-value=1.2e+02 Score=29.15 Aligned_cols=104 Identities=8% Similarity=0.013 Sum_probs=52.9
Q ss_pred CCCEEEEEECC-----------CeEEEEECCCceEEEecCcc-----CCeEEEEEecCCCEEEEEecC------------
Q 010754 285 EGTLLATGSYD-----------GQARIWSTNGDLKCTLSKHK-----GPIFSLKWNKKGDYLLTGSCD------------ 336 (502)
Q Consensus 285 ~g~~l~s~~~d-----------g~i~iwd~~~~~~~~~~~~~-----~~v~~l~~~~~~~~l~s~~~d------------ 336 (502)
++++++.|+.+ ..+.+||.....-..+.... ..-.+++. -+++.++.++.+
T Consensus 137 ~~~iyv~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~gG~~~~~ 215 (341)
T PLN02153 137 ENHVYVFGGVSKGGLMKTPERFRTIEAYNIADGKWVQLPDPGENFEKRGGAGFAV-VQGKIWVVYGFATSILPGGKSDYE 215 (341)
T ss_pred CCEEEEECCccCCCccCCCcccceEEEEECCCCeEeeCCCCCCCCCCCCcceEEE-ECCeEEEEeccccccccCCcccee
Confidence 45677777754 24677887765444433211 00112222 245555554432
Q ss_pred -CeEEEEEcCCCceEEEEeec----cCCeEEEEecCCCEEEEEeCC--------------CeEEEEEcCCCc
Q 010754 337 -KTAIVWDVKTEEWKQQFEFH----SGPTLDVDWRNNVSFATSSTD--------------NMIYVCKIGENR 389 (502)
Q Consensus 337 -~~i~~wd~~~~~~~~~~~~~----~~~v~~v~~~~~~~~~~~~~d--------------~~i~i~d~~~~~ 389 (502)
..+.+||..+.++...-... ......+....+..++.|+.. +.+..||..+.+
T Consensus 216 ~~~v~~yd~~~~~W~~~~~~g~~P~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~n~v~~~d~~~~~ 287 (341)
T PLN02153 216 SNAVQFFDPASGKWTEVETTGAKPSARSVFAHAVVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETLV 287 (341)
T ss_pred cCceEEEEcCCCcEEeccccCCCCCCcceeeeEEECCEEEEECcccCCccccccccccccccEEEEEcCccE
Confidence 46888999887765432111 111223333445566676641 256777776553
No 500
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=67.64 E-value=18 Score=21.67 Aligned_cols=27 Identities=22% Similarity=0.196 Sum_probs=23.0
Q ss_pred EEEEEecCCeEEEEEcCCCceEEEEee
Q 010754 329 YLLTGSCDKTAIVWDVKTEEWKQQFEF 355 (502)
Q Consensus 329 ~l~s~~~d~~i~~wd~~~~~~~~~~~~ 355 (502)
.++.++.+|.|+-.|.++|+.+..+..
T Consensus 2 ~v~~~~~~g~l~AlD~~TG~~~W~~~~ 28 (38)
T PF01011_consen 2 RVYVGTPDGYLYALDAKTGKVLWKFQT 28 (38)
T ss_dssp EEEEETTTSEEEEEETTTTSEEEEEES
T ss_pred EEEEeCCCCEEEEEECCCCCEEEeeeC
Confidence 456679999999999999999888764
Done!